U.S. patent application number 17/176981 was filed with the patent office on 2021-08-05 for tyk2 inhibitors and uses thereof.
The applicant listed for this patent is Nimbus Lakshmi, Inc.. Invention is credited to Markus Dahlgren, Jeremy Robert Greenwood, Geraldine C. Harriman, Joshua Jahmil Kennedy-Smith, Craig E. Masse, Donna L. Romero, Mee Shelley, Ronald T. Wester.
Application Number | 20210238198 17/176981 |
Document ID | / |
Family ID | 1000005523214 |
Filed Date | 2021-08-05 |
United States Patent
Application |
20210238198 |
Kind Code |
A1 |
Dahlgren; Markus ; et
al. |
August 5, 2021 |
TYK2 INHIBITORS AND USES THEREOF
Abstract
The present invention provides compounds, compositions thereof,
and methods of using the same for the inhibition of TYK2, and the
treatment of TYK2-mediated disorders.
Inventors: |
Dahlgren; Markus;
(Stratford, CT) ; Greenwood; Jeremy Robert;
(Brooklyn, NY) ; Harriman; Geraldine C.;
(Charlestown, RI) ; Kennedy-Smith; Joshua Jahmil;
(New York, NY) ; Masse; Craig E.; (Cambridge,
MA) ; Romero; Donna L.; (Chesterfield, MO) ;
Shelley; Mee; (Tigard, OR) ; Wester; Ronald T.;
(Ledyard, CT) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
Nimbus Lakshmi, Inc. |
Cambridge |
MA |
US |
|
|
Family ID: |
1000005523214 |
Appl. No.: |
17/176981 |
Filed: |
February 16, 2021 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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16271503 |
Feb 8, 2019 |
10968236 |
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17176981 |
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15590523 |
May 9, 2017 |
10253046 |
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16271503 |
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15054594 |
Feb 26, 2016 |
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15590523 |
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62126125 |
Feb 27, 2015 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
C07D 471/04 20130101;
A61P 37/00 20180101; C07D 487/04 20130101; A61P 35/00 20180101;
A61K 31/519 20130101; C07F 5/027 20130101; C07D 519/00 20130101;
A61K 31/437 20130101; C07F 5/025 20130101 |
International
Class: |
C07D 519/00 20060101
C07D519/00; C07F 5/02 20060101 C07F005/02; A61P 35/00 20060101
A61P035/00; A61P 37/00 20060101 A61P037/00; A61K 31/519 20060101
A61K031/519; A61K 31/437 20060101 A61K031/437; C07D 471/04 20060101
C07D471/04; C07D 487/04 20060101 C07D487/04 |
Claims
1-3. (canceled)
4. A compound of formula IV: ##STR00234## or a pharmaceutically
acceptable salt thereof, wherein: each of X and Y is independently
.dbd.C(R.sup.6)--, .dbd.N--, or .dbd.N.sup.+(.fwdarw.O.sup.-)--,
provided that X and Y are not simultaneously .dbd.C(R.sup.6)--;
Ring A is phenyl; a 5-6 membered heteroaryl ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur; a 3-6 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur; or a 4-6 membered saturated or
partially unsaturated carbocyclic ring; wherein Ring A is
substituted with m instances of R.sup.7; each R.sup.2 is
independently an optionally substituted group selected from
C.sub.1-6 aliphatic, phenyl, a 4-7 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, and a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; R.sup.3 is a group selected from
C.sub.1-6 alkyl, phenyl, a 3-7 membered saturated or partially
unsaturated carbocyclic ring, a 3-7 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, and a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; wherein R.sup.3 is substituted with n
instances of R.sup.8; R.sup.4 is hydrogen or optionally substituted
C.sub.1-6 aliphatic; or R.sup.4 and one instance of R.sup.7 are
taken together with their intervening atoms to form a 5-6 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; R.sup.5 is
a group selected from halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, --N(R)S(O).sub.2R,
phenyl, a 3-14 membered saturated or partially unsaturated
heterocyclic ring having 1-4 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; wherein R.sup.5 is substituted with p instances
of R.sup.9; R.sup.6 is hydrogen, --R.sup.2, halogen, --CN,
--NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; each instance of R.sup.7,
R.sup.8, R.sup.10, and R.sup.11 is independently oxo, --R.sup.2,
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2J--S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; each instance of R.sup.9
is independently oxo, C.sub.1-6 hydroxyaliphatic, --R.sup.2,
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2J--S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; L.sup.1 is a covalent
bond or a C.sub.1-6 bivalent saturated or unsaturated, straight or
branched hydrocarbon chain wherein one or two methylene units of
the chain are optionally and independently replaced by
--C(R.sup.10).sub.2--, --N(R)--, --N(R)C(O)--, --C(O)N(R)--,
--N(R)S(O).sub.2--, --S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--,
--C(O)O--, --S--, --S(O)-- or --S(O).sub.2--; or L.sup.1 and one
instance of R.sup.7 are taken together with their intervening atoms
to form a 5-10 membered partially unsaturated or aromatic ring
having 1-4 heteroatoms independently selected from nitrogen,
oxygen, sulfur, and boron; wherein said ring is substituted by q
instances of R.sup.11; and R.sup.5 is attached to any position of
the ring formed by L.sup.1 and R.sup.7; m is 0-4; n is 0-4; p is
0-6; q is 0-4; and each R is independently hydrogen, or an
optionally substituted group selected from C.sub.1-6 aliphatic,
phenyl, a 4-7 membered saturated or partially unsaturated
heterocyclic having 1-2 heteroatoms independently selected from
nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl ring
having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur, or: two R groups on the same nitrogen are taken
together with their intervening atoms to form a 4-7 membered
saturated, partially unsaturated, or heteroaryl ring having 0-3
heteroatoms, in addition to the nitrogen, independently selected
from nitrogen, oxygen, and sulfur.
5. The compound of claim 4, wherein Ring A is phenyl, pyridin-2-yl,
pyridine-3-yl, or pyrazol-4-yl.
6. The compound of claim 5, wherein Ring A is pyridin-2-yl.
7. The compound of claim 4, wherein X is .dbd.C(R.sup.6)--; and Y
is .dbd.N--.
8. The compound of claim 7, wherein R.sup.6 is hydrogen.
9. The compound of claim 4, wherein L.sup.1 is --CH.sub.2C(O)--,
--C(O)--, or a covalent bond.
10. The compound of claim 9, wherein L.sup.1 is --C(O)--.
11. The compound of claim 9, wherein L.sup.1 is a covalent
bond.
12. The compound of claim 4, wherein R.sup.3 is phenyl,
pyrrolidinyl, or piperidinyl.
13. The compound of claim 12, wherein R.sup.3 is phenyl.
14. The compound of claim 4, wherein wherein n is 2, and at least
one R.sup.8 is fluoro.
15. (canceled)
16. A pharmaceutical composition comprising a compound of claim 4,
or a pharmaceutically acceptable salt thereof, and a
pharmaceutically acceptable carrier, adjuvant, or vehicle.
17-36. (canceled)
37. The compound of claim 5, wherein Ring A is phenyl.
38. The compound of claim 5, wherein Ring A is pyridine-3-yl.
39. The compound of claim 5, wherein Ring A is pyrazol-4-yl.
40. The compound of claim 4, wherein X is .dbd.N-- and Y is
.dbd.N--.
41. The compound of claim 4, wherein X is .dbd.N-- and Y is
.dbd.C(R.sup.6)--.
42. The compound of claim 9, wherein L.sup.1 is
--CH.sub.2C(O)--.
43. The compound of claim 12, wherein R.sup.3 is pyrrolidinyl.
44. The compound of claim 12, wherein R.sup.3 is piperidinyl.
Description
TECHNICAL FIELD OF THE INVENTION
[0001] The present invention relates to compounds and methods
useful for inhibiting non-receptor tyrosine-protein kinase 2
("TYK2"), also known as Tyrosine kinase 2. The invention also
provides pharmaceutically acceptable compositions comprising
compounds of the present invention and methods of using said
compositions in the treatment of various disorders.
BACKGROUND OF THE INVENTION
[0002] The search for new therapeutic agents has been greatly aided
in recent years by a better understanding of the structure of
enzymes and other biomolecules associated with diseases. One
important class of enzymes that has been the subject of extensive
study is the protein kinase family.
[0003] Protein kinases constitute a large family of structurally
related enzymes that are responsible for the control of a variety
of signal transduction processes within the cell. Protein kinases
are thought to have evolved from a common ancestral gene due to the
conservation of their structure and catalytic function. Almost all
kinases contain a similar 250-300 amino acid catalytic domain. The
kinases may be categorized into families by the substrates they
phosphorylate (e.g., protein-tyrosine, protein-serine/threonine,
lipids, etc.).
[0004] In general, protein kinases mediate intracellular signaling
by effecting a phosphoryl transfer from a nucleoside triphosphate
to a protein acceptor that is involved in a signaling pathway.
These phosphorylation events act as molecular on/off switches that
can modulate or regulate the target protein biological function.
These phosphorylation events are ultimately triggered in response
to a variety of extracellular and other stimuli. Examples of such
stimuli include environmental and chemical stress signals (e.g.,
osmotic shock, heat shock, ultraviolet radiation, bacterial
endotoxins, and H.sub.2O.sub.2), cytokines (e.g., interleukin-1
(IL-1), interleukin-8 (IL-8), and tumor necrosis factor .alpha.
(TNF-.alpha.)), and growth factors (e.g., granulocyte
macrophage-colony-stimulating factor (GM-CSF), and fibroblast
growth factor (FGF)). An extracellular stimulus may affect one or
more cellular responses related to cell growth, migration,
differentiation, secretion of hormones, activation of transcription
factors, muscle contraction, glucose metabolism, control of protein
synthesis, and regulation of the cell cycle.
[0005] Many diseases are associated with abnormal cellular
responses triggered by kinase-mediated events. These diseases
include, but are not limited to, autoimmune diseases, inflammatory
diseases, bone diseases, metabolic diseases, neurological and
neurodegenerative diseases, cancer, cardiovascular diseases,
allergies and asthma, Alzheimer's disease, and hormone-related
diseases. Accordingly, there remains a need to find protein kinase
inhibitors useful as therapeutic agents.
SUMMARY OF THE INVENTION
[0006] It has now been found that compounds of this invention, and
pharmaceutically acceptable compositions thereof, are effective as
inhibitors of TYK2 kinase.
[0007] Compounds of the present invention, and pharmaceutically
acceptable compositions thereof, are useful for treating a variety
of diseases, disorders or conditions, associated with regulation of
signaling pathways implicating TYK2 kinases. Such diseases,
disorders, or conditions include those described herein.
[0008] Compounds provided by this invention are also useful for the
study of TYK2 enzymes in biological and pathological phenomena; the
study of intracellular signal transduction pathways occurring in
bodily tissues; and the comparative evaluation of new TYK2
inhibitors or other regulators of kinases, signaling pathways, and
cytokine levels in vitro or in vivo.
DETAILED DESCRIPTION OF CERTAIN EMBODIMENTS
1. General Description of Certain Embodiments of the Invention
[0009] Compounds of the present invention, and compositions
thereof, are useful as inhibitors of TYK2 protein kinase.
[0010] The binding pocket of TYK2 contains a plurality of hydration
sites, each of which is occupied by a single molecule of water.
Each of these water molecules has a stability rating associated
with it. As used herein, the term "stability rating" refers to a
numerical calculation which incorporates the enthalpy, entropy, and
free energy values associated with each water molecule. This
stability rating allows for a measurable determination of the
relative stability of water molecules that occupy hydration sites
in the binding pocket of TYK2.
[0011] Water molecules occupying hydration sites in the binding
pocket of TYK2 having a stability rating of >2.5 kcal/mol are
referred to as "unstable waters."
[0012] Without wishing to be bound by any particular theory, it is
believed that displacement or disruption of an unstable water
molecule (i.e., a water molecule having a stability rating of
>2.5 kcal/mol), or replacement of a stable water (i.e., a water
molecule having a stability rating of <1 kcal/mol), by an
inhibitor results in tighter binding of that inhibitor.
Accordingly, inhibitors designed to displace one or more unstable
water molecules (i.e., those unstable water molecules not displaced
by any known inhibitor) will be a tighter binder and, therefore,
more potent inhibitor as compared to an inhibitor that does not
displace unstable water molecules.
[0013] It was surprisingly found that provided compounds displace
or disrupt one or more unstable water molecules. In some
embodiments, a provided compound displaces or disrupts at least two
unstable water molecules.
[0014] In certain embodiments, the present invention provides a
compound of formula I:
##STR00001##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, R.sup.1, R.sup.1', R.sup.3, R.sup.4, and
R.sup.5 is as defined below and described in embodiments herein,
both singly and in combination.
[0015] In certain embodiments, the present invention provides a
compound of formula II:
##STR00002##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4, and
R.sup.5 is as defined below and described in embodiments herein,
both singly and in combination.
[0016] In certain embodiments, the present invention provides a
compound of formula III:
##STR00003##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, R.sup.1, R.sup.1', R.sup.3, R.sup.4', and
R.sup.5 is as defined below and described in embodiments herein,
both singly and in combination.
[0017] In certain embodiments, the present invention provides a
compound of formula IV:
##STR00004##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, R.sup.3, R.sup.4, and R.sup.5 is as defined
below and described in embodiments herein, both singly and in
combination.
2. Compounds and Definitions
[0018] Compounds of the present invention include those described
generally herein, and are further illustrated by the classes,
subclasses, and species disclosed herein. As used herein, the
following definitions shall apply unless otherwise indicated. For
purposes of this invention, the chemical elements are identified in
accordance with the Periodic Table of the Elements, CAS version,
Handbook of Chemistry and Physics, 75.sup.th Ed. Additionally,
general principles of organic chemistry are described in "Organic
Chemistry", Thomas Sorrell, University Science Books, Sausalito:
1999, and "March's Advanced Organic Chemistry", 5.sup.th Ed., Ed.:
Smith, M. B. and March, J., John Wiley & Sons, New York: 2001,
the entire contents of which are hereby incorporated by
reference.
[0019] The term "aliphatic" or "aliphatic group", as used herein,
means a straight-chain (i.e., unbranched) or branched, substituted
or unsubstituted hydrocarbon chain that is completely saturated or
that contains one or more units of unsaturation, or a monocyclic
hydrocarbon or bicyclic hydrocarbon that is completely saturated or
that contains one or more units of unsaturation, but which is not
aromatic (also referred to herein as "carbocycle," "cycloaliphatic"
or "cycloalkyl"), that has a single point of attachment to the rest
of the molecule. Unless otherwise specified, aliphatic groups
contain 1-6 aliphatic carbon atoms. In some embodiments, aliphatic
groups contain 1-5 aliphatic carbon atoms. In other embodiments,
aliphatic groups contain 1-4 aliphatic carbon atoms. In still other
embodiments, aliphatic groups contain 1-3 aliphatic carbon atoms,
and in yet other embodiments, aliphatic groups contain 1-2
aliphatic carbon atoms. In some embodiments, "cycloaliphatic" (or
"carbocycle" or "cycloalkyl") refers to a monocyclic
C.sub.3-C.sub.6 hydrocarbon that is completely saturated or that
contains one or more units of unsaturation, but which is not
aromatic, that has a single point of attachment to the rest of the
molecule. Suitable aliphatic groups include, but are not limited
to, linear or branched, substituted or unsubstituted alkyl,
alkenyl, alkynyl groups and hybrids thereof such as
(cycloalkyl)alkyl, (cycloalkenyl)alkyl or (cycloalkyl)alkenyl.
[0020] As used herein, the term "bridged bicyclic" refers to any
bicyclic ring system, i.e. carbocyclic or heterocyclic, saturated
or partially unsaturated, having at least one bridge. As defined by
IUPAC, a "bridge" is an unbranched chain of atoms or an atom or a
valence bond connecting two bridgeheads, where a "bridgehead" is
any skeletal atom of the ring system which is bonded to three or
more skeletal atoms (excluding hydrogen). In some embodiments, a
bridged bicyclic group has 7-12 ring members and 0-4 heteroatoms
independently selected from nitrogen, oxygen, or sulfur. Such
bridged bicyclic groups are well known in the art and include those
groups set forth below where each group is attached to the rest of
the molecule at any substitutable carbon or nitrogen atom. Unless
otherwise specified, a bridged bicyclic group is optionally
substituted with one or more substituents as set forth for
aliphatic groups. Additionally or alternatively, any substitutable
nitrogen of a bridged bicyclic group is optionally substituted.
Exemplary bridged bicyclics include:
##STR00005##
[0021] The term "lower alkyl" refers to a C.sub.1-4 straight or
branched alkyl group. Exemplary lower alkyl groups are methyl,
ethyl, propyl, isopropyl, butyl, isobutyl, and tert-butyl.
[0022] The term "lower haloalkyl" refers to a C.sub.1-4 straight or
branched alkyl group that is substituted with one or more halogen
atoms.
[0023] The term "heteroatom" means one or more of oxygen, sulfur,
nitrogen, phosphorus, or silicon (including, any oxidized form of
nitrogen, sulfur, phosphorus, or silicon; the quaternized form of
any basic nitrogen or; a substitutable nitrogen of a heterocyclic
ring, for example N (as in 3,4-dihydro-2H-pyrrolyl), NH (as in
pyrrolidinyl) or NR.sup.+ (as in N-substituted pyrrolidinyl)).
[0024] The term "unsaturated," as used herein, means that a moiety
has one or more units of unsaturation.
[0025] As used herein, the term "bivalent C.sub.1-8 (or C.sub.1-6)
saturated or unsaturated, straight or branched, hydrocarbon chain",
refers to bivalent alkylene, alkenylene, and alkynylene chains that
are straight or branched as defined herein.
[0026] The term "alkylene" refers to a bivalent alkyl group. An
"alkylene chain" is a polymethylene group, i.e.,
--(CH.sub.2).sub.n--, wherein n is a positive integer, preferably
from 1 to 6, from 1 to 4, from 1 to 3, from 1 to 2, or from 2 to 3.
A substituted alkylene chain is a polymethylene group in which one
or more methylene hydrogen atoms are replaced with a substituent.
Suitable substituents include those described below for a
substituted aliphatic group.
[0027] The term "alkenylene" refers to a bivalent alkenyl group. A
substituted alkenylene chain is a polymethylene group containing at
least one double bond in which one or more hydrogen atoms are
replaced with a substituent. Suitable substituents include those
described below for a substituted aliphatic group.
[0028] As used herein, the term "cyclopropylenyl" refers to a
bivalent cyclopropyl group of the following structure:
##STR00006##
[0029] The term "halogen" means F, Cl, Br, or I.
[0030] The term "aryl" used alone or as part of a larger moiety as
in "aralkyl," "aralkoxy," or "aryloxyalkyl," refers to monocyclic
or bicyclic ring systems having a total of five to fourteen ring
members, wherein at least one ring in the system is aromatic and
wherein each ring in the system contains 3 to 7 ring members. The
term "aryl" may be used interchangeably with the term "aryl ring."
In certain embodiments of the present invention, "aryl" refers to
an aromatic ring system which includes, but not limited to, phenyl,
biphenyl, naphthyl, anthracyl and the like, which may bear one or
more substituents. Also included within the scope of the term
"aryl," as it is used herein, is a group in which an aromatic ring
is fused to one or more non-aromatic rings, such as indanyl,
phthalimidyl, naphthimidyl, phenanthridinyl, or tetrahydronaphthyl,
and the like.
[0031] The terms "heteroaryl" and "heteroar-," used alone or as
part of a larger moiety, e.g., "heteroaralkyl," or
"heteroaralkoxy," refer to groups having 5 to 10 ring atoms,
preferably 5, 6, or 9 ring atoms; having 6, 10, or 14 n electrons
shared in a cyclic array; and having, in addition to carbon atoms,
from one to five heteroatoms. The term "heteroatom" refers to
nitrogen, oxygen, or sulfur, and includes any oxidized form of
nitrogen or sulfur, and any quaternized form of a basic nitrogen.
Heteroaryl groups include, without limitation, thienyl, furanyl,
pyrrolyl, imidazolyl, pyrazolyl, triazolyl, tetrazolyl, oxazolyl,
isoxazolyl, oxadiazolyl, thiazolyl, isothiazolyl, thiadiazolyl,
pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, indolizinyl, purinyl,
naphthyridinyl, and pteridinyl. The terms "heteroaryl" and
"heteroar-", as used herein, also include groups in which a
heteroaromatic ring is fused to one or more aryl, cycloaliphatic,
or heterocyclyl rings, where the radical or point of attachment is
on the heteroaromatic ring. Nonlimiting examples include indolyl,
isoindolyl, benzothienyl, benzofuranyl, dibenzofuranyl, indazolyl,
benzimidazolyl, benzthiazolyl, quinolyl, isoquinolyl, cinnolinyl,
phthalazinyl, quinazolinyl, quinoxalinyl, AH quinolizinyl,
carbazolyl, acridinyl, phenazinyl, phenothiazinyl, phenoxazinyl,
tetrahydroquinolinyl, tetrahydroisoquinolinyl, and
pyrido[2,3-b]-1,4-oxazin-3(4H)-one. A heteroaryl group may be mono-
or bicyclic. The term "heteroaryl" may be used interchangeably with
the terms "heteroaryl ring," "heteroaryl group," or
"heteroaromatic," any of which terms include rings that are
optionally substituted. The term "heteroaralkyl" refers to an alkyl
group substituted by a heteroaryl, wherein the alkyl and heteroaryl
portions independently are optionally substituted.
[0032] As used herein, the terms "heterocycle," "heterocyclyl,"
"heterocyclic radical," and "heterocyclic ring" are used
interchangeably and refer to a stable 5- to 7-membered monocyclic
or 7-10-membered bicyclic heterocyclic moiety that is either
saturated or partially unsaturated, and having, in addition to
carbon atoms, one or more, preferably one to four, heteroatoms, as
defined above. When used in reference to a ring atom of a
heterocycle, the term "nitrogen" includes a substituted nitrogen.
As an example, in a saturated or partially unsaturated ring having
0-3 heteroatoms selected from oxygen, sulfur or nitrogen, the
nitrogen may be N (as in 3,4-dihydro-2H pyrrolyl), NH (as in
pyrrolidinyl), or .sup.+NR (as in N-substituted pyrrolidinyl).
[0033] A heterocyclic ring can be attached to its pendant group at
any heteroatom or carbon atom that results in a stable structure
and any of the ring atoms can be optionally substituted. Examples
of such saturated or partially unsaturated heterocyclic radicals
include, without limitation, tetrahydrofuranyl,
tetrahydrothiophenyl pyrrolidinyl, piperidinyl, pyrrolinyl,
tetrahydroquinolinyl, tetrahydroisoquinolinyl, decahydroquinolinyl,
oxazolidinyl, piperazinyl, dioxanyl, dioxolanyl, diazepinyl,
oxazepinyl, thiazepinyl, morpholinyl, 2-oxa-6-azaspiro[3.3]heptane,
and quinuclidinyl. The terms "heterocycle," "heterocyclyl,"
"heterocyclyl ring," "heterocyclic group," "heterocyclic moiety,"
and "heterocyclic radical," are used interchangeably herein, and
also include groups in which a heterocyclyl ring is fused to one or
more aryl, heteroaryl, or cycloaliphatic rings, such as indolinyl,
3H indolyl, chromanyl, phenanthridinyl, or tetrahydroquinolinyl. A
heterocyclyl group may be mono- or bicyclic. The term
"heterocyclylalkyl" refers to an alkyl group substituted by a
heterocyclyl, wherein the alkyl and heterocyclyl portions
independently are optionally substituted.
[0034] As used herein, the term "partially unsaturated" refers to a
ring moiety that includes at least one double or triple bond. The
term "partially unsaturated" is intended to encompass rings having
multiple sites of unsaturation, but is not intended to include aryl
or heteroaryl moieties, as herein defined.
[0035] As described herein, compounds of the invention may contain
"optionally substituted" moieties. In general, the term
"substituted," whether preceded by the term "optionally" or not,
means that one or more hydrogens of the designated moiety are
replaced with a suitable substituent. Unless otherwise indicated,
an "optionally substituted" group may have a suitable substituent
at each substitutable position of the group, and when more than one
position in any given structure may be substituted with more than
one substituent selected from a specified group, the substituent
may be either the same or different at every position. Combinations
of substituents envisioned by this invention are preferably those
that result in the formation of stable or chemically feasible
compounds. The term "stable," as used herein, refers to compounds
that are not substantially altered when subjected to conditions to
allow for their production, detection, and, in certain embodiments,
their recovery, purification, and use for one or more of the
purposes disclosed herein.
[0036] Suitable monovalent substituents on a substitutable carbon
atom of an "optionally substituted" group are independently
halogen; --(CH.sub.2).sub.0-4R.sup..smallcircle.;
--(CH.sub.2).sub.0-4OR.sup..smallcircle.;
--O(CH.sub.2).sub.0-4R.sup..smallcircle.,
--O--(CH.sub.2).sub.0-4C(O)OR.sup..smallcircle.;
--(CH.sub.2).sub.0-4CH(OR.sup..smallcircle.).sub.2;
--(CH.sub.2).sub.0-4SR.sup..smallcircle.; --(CH.sub.2).sub.0-4Ph,
which may be substituted with R.sup..smallcircle.;
--(CH.sub.2).sub.0-4O(CH.sub.2).sub.0-1Ph which may be substituted
with R.sup..smallcircle.; --CH.dbd.CHPh, which may be substituted
with R.sup..smallcircle.;
--(CH.sub.2).sub.0-4O(CH.sub.2).sub.0-1-pyridyl which may be
substituted with R.sup..smallcircle.; --NO.sub.2; --CN; --N.sub.3;
--(CH.sub.2).sub.0-4N(R.sup..smallcircle.).sub.2;
--(CH.sub.2).sub.0-4N(R.sup..smallcircle.)C(O)R.sup..smallcircle.;
--N(R.sup..smallcircle.)C(S)R.sup..smallcircle.;
--(CH.sub.2).sub.0-4N(R.sup..smallcircle.)C(O)NR.sup..smallcircle..sub.2;
--N(R.sup..smallcircle.)C(S)NR.sup..smallcircle..sub.2;
--(CH.sub.2).sub.0-4N(R.sup..smallcircle.)C(O)OR.sup..smallcircle.;
--N(R.sup..smallcircle.)N(R.sup..smallcircle.)C(O)R.sup..smallcircle.;
--N(R.sup..smallcircle.)N(R.sup..smallcircle.)C(O)NR.sup..smallcircle..su-
b.2;
--N(R.sup..smallcircle.)N(R.sup..smallcircle.)C(O)OR.sup..smallcircle-
.; --(CH.sub.2).sub.0-4C(O)R.sup..smallcircle.;
--C(S)R.sup..smallcircle.;
--(CH.sub.2).sub.0-4C(O)OR.sup..smallcircle.;
--(CH.sub.2).sub.0-4C(O)SR.sup..smallcircle.;
--(CH.sub.2).sub.0-4C(O)OSiR.sup..smallcircle..sub.3;
--(CH.sub.2).sub.0-4OC(O)R.sup..smallcircle.;
--OC(O)(CH.sub.2).sub.0-4SR.sup..smallcircle.;
--SC(S)SR.sup..smallcircle.;
--(CH.sub.2).sub.0-4SC(O)R.sup..smallcircle.;
--(CH.sub.2).sub.0-4C(O)NR.sup..smallcircle..sub.2;
--C(S)NR.sup..smallcircle..sub.2; --C(S)SR.sup..smallcircle.;
--SC(S)SR.sup..smallcircle.,
--(CH.sub.2).sub.0-4OC(O)NR.sup..smallcircle..sub.2;
--C(O)N(OR.sup..smallcircle.)R.sup..smallcircle.;
--C(O)C(O)R.sup..smallcircle.;
--C(O)CH.sub.2C(O)R.sup..smallcircle.;
--C(NOR.sup..smallcircle.)R.sup..smallcircle.;
--(CH.sub.2).sub.0-4SSR.sup..smallcircle.;
--(CH.sub.2).sub.0-4S(O).sub.2R.sup..smallcircle.;
--(CH.sub.2).sub.0-4S(O).sub.2OR.sup..smallcircle.;
--(CH.sub.2).sub.0-4OS(O).sub.2R.sup..smallcircle.;
--S(O).sub.2NR.sup..smallcircle..sub.2;
--(CH.sub.2).sub.0-4S(O)R.sup..smallcircle.;
--N(R.sup..smallcircle.)S(O).sub.2NR.sup..smallcircle..sub.2;
--N(R.sup..smallcircle.)S(O).sub.2R.sup..smallcircle.;
--N(OR.sup..smallcircle.)R.sup..smallcircle.;
--C(NH)NR.sup..smallcircle..sub.2; --P(O).sub.2R.sup..smallcircle.;
--P(O)R.sup..smallcircle..sub.2; --OP(O)R.sup..smallcircle..sub.2;
--OP(O)(OR.sup..smallcircle.).sub.2; SiR.sup..smallcircle..sub.3;
--(C.sub.1-4 straight or branched
alkylene)O--N(R.sup..smallcircle.).sub.2; or --(C.sub.1-4 straight
or branched alkylene)C(O)O--N(R.sup..smallcircle.).sub.2, wherein
each R.sup..smallcircle. may be substituted as defined below and is
independently hydrogen, C.sub.1-6 aliphatic, --CH.sub.2Ph,
--O(CH.sub.2).sub.0-1Ph, --CH.sub.2-(5-6 membered heteroaryl ring),
or a 5-6-membered saturated, partially unsaturated, or aryl ring
having 0-4 heteroatoms independently selected from nitrogen,
oxygen, or sulfur, or, notwithstanding the definition above, two
independent occurrences of R.sup..smallcircle., taken together with
their intervening atom(s), form a 3-12-membered saturated,
partially unsaturated, or aryl mono- or bicyclic ring having 0-4
heteroatoms independently selected from nitrogen, oxygen, or
sulfur, which may be substituted as defined below.
[0037] Suitable monovalent substituents on R.sup..smallcircle. (or
the ring formed by taking two independent occurrences of
R.sup..smallcircle. together with their intervening atoms), are
independently halogen, --(CH.sub.2).sub.0-2R.sup..circle-solid.,
-(haloR.sup..circle-solid.), --(CH.sub.2).sub.0-2OH,
--(CH.sub.2).sub.0-2OR.sup..circle-solid.,
--(CH.sub.2).sub.0-2CH(OR.sup..circle-solid.).sub.2;
--O(haloR.sup..circle-solid.), --CN, --N.sub.3,
--(CH.sub.2).sub.0-2C(O)R.sup..circle-solid.,
--(CH.sub.2).sub.0-2C(O)OH,
--(CH.sub.2).sub.0-2C(O)OR.sup..circle-solid.,
--(CH.sub.2).sub.0-2SR.sup..circle-solid., --(CH.sub.2).sub.0-2SH,
--(CH.sub.2).sub.0-2NH.sub.2,
--(CH.sub.2).sub.0-2NHR.sup..circle-solid.,
--(CH.sub.2).sub.0-2NR.sup..circle-solid..sub.2, --NO.sub.2,
--SiR.sup..circle-solid..sub.3, --OSiR.sup..circle-solid..sub.3,
--C(O)SR.sup..circle-solid.--(C.sub.1-4 straight or branched
alkylene)C(O)OR.sup..circle-solid., or --SSR.sup..circle-solid.
wherein each R.sup..circle-solid. is unsubstituted or where
preceded by "halo" is substituted only with one or more halogens,
and is independently selected from C.sub.1-4 aliphatic,
--CH.sub.2Ph, --O(CH.sub.2).sub.0-1Ph, or a 5-6-membered saturated,
partially unsaturated, or aryl ring having 0-4 heteroatoms
independently selected from nitrogen, oxygen, or sulfur. Suitable
divalent substituents on a saturated carbon atom of
R.sup..smallcircle. include .dbd.O and .dbd.S.
[0038] Suitable divalent substituents on a saturated carbon atom of
an "optionally substituted" group include the following: .dbd.O,
.dbd.S, .dbd.NNR*.sub.2, .dbd.NNHC(O)R*, .dbd.NNHC(O)OR*,
.dbd.NNHS(O).sub.2R*, .dbd.NR*, .dbd.NOR*,
--O(C(R*.sub.2)).sub.2-3O--, or --S(C(R*.sub.2)).sub.2-3S--,
wherein each independent occurrence of R* is selected from
hydrogen, C.sub.1-6 aliphatic which may be substituted as defined
below, or an unsubstituted 5-6-membered saturated, partially
unsaturated, or aryl ring having 0-4 heteroatoms independently
selected from nitrogen, oxygen, or sulfur. Suitable divalent
substituents that are bound to vicinal substitutable carbons of an
"optionally substituted" group include: --O(CR*.sub.2).sub.2-3O--,
wherein each independent occurrence of R* is selected from
hydrogen, C.sub.1-6 aliphatic which may be substituted as defined
below, or an unsubstituted 5-6-membered saturated, partially
unsaturated, or aryl ring having 0-4 heteroatoms independently
selected from nitrogen, oxygen, or sulfur.
[0039] Suitable substituents on the aliphatic group of R* include
halogen, --R.sup..circle-solid., -(haloR.sup..circle-solid.), --OH,
--OR.sup..circle-solid., --O(haloR.sup..circle-solid.), --CN,
--C(O)OH, --C(O)OR.sup..circle-solid., --NH.sub.2,
--NHR.sup..circle-solid., --NR.sup..circle-solid..sub.2, or
--NO.sub.2, wherein each R.sup..circle-solid. is unsubstituted or
where preceded by "halo" is substituted only with one or more
halogens, and is independently C.sub.1-4 aliphatic, --CH.sub.2Ph,
--O(CH.sub.2).sub.0-1Ph, or a 5-6-membered saturated, partially
unsaturated, or aryl ring having 0-4 heteroatoms independently
selected from nitrogen, oxygen, or sulfur.
[0040] Suitable substituents on a substitutable nitrogen of an
"optionally substituted" group include --R.sup..dagger.,
--NR.sup..dagger..sub.2, --C(O)R.sup..dagger.,
--C(O)OR.sup..dagger., --C(O)C(O)R.sup..dagger.,
--C(O)CH.sub.2C(O)R.sup..dagger., --S(O).sub.2R.sup..dagger.,
--S(O).sub.2NR.sup..dagger..sub.2, --C(S)NR.sup..dagger..sub.2,
--C(NH)NR.sup..dagger..sub.2, or
--N(R.sup..dagger.)S(O).sub.2R.sup..dagger.; wherein each
R.sup..dagger. is independently hydrogen, C.sub.1-6 aliphatic which
may be substituted as defined below, unsubstituted --OPh, or an
unsubstituted 5-6-membered saturated, partially unsaturated, or
aryl ring having 0-4 heteroatoms independently selected from
nitrogen, oxygen, or sulfur, or, notwithstanding the definition
above, two independent occurrences of RJ, taken together with their
intervening atom(s) form an unsubstituted 3-12-membered saturated,
partially unsaturated, or aryl mono- or bicyclic ring having 0-4
heteroatoms independently selected from nitrogen, oxygen, or
sulfur.
[0041] Suitable substituents on the aliphatic group of RJ are
independently halogen, --R.sup..circle-solid.,
-(haloR.sup..circle-solid.), --OH, --OR.sup..circle-solid.,
--O(haloR.sup..circle-solid.), --CN, --C(O)OH,
--C(O)OR.sup..circle-solid., --NH.sub.2, --NHR.sup..circle-solid.,
--NR.sup..circle-solid..sub.2, or --NO.sub.2, wherein each
R.sup..circle-solid. is unsubstituted or where preceded by "halo"
is substituted only with one or more halogens, and is independently
C.sub.1-4 aliphatic, --CH.sub.2Ph, --O(CH.sub.2).sub.0-1Ph, or a
5-6-membered saturated, partially unsaturated, or aryl ring having
0-4 heteroatoms independently selected from nitrogen, oxygen, or
sulfur.
[0042] As used herein, the term "pharmaceutically acceptable salt"
refers to those salts which are, within the scope of sound medical
judgment, suitable for use in contact with the tissues of humans
and lower animals without undue toxicity, irritation, allergic
response and the like, and are commensurate with a reasonable
benefit/risk ratio. Pharmaceutically acceptable salts are well
known in the art. For example, S. M. Berge et al., describe
pharmaceutically acceptable salts in detail in J. Pharmaceutical
Sciences, 1977, 66, 1-19, incorporated herein by reference.
Pharmaceutically acceptable salts of the compounds of this
invention include those derived from suitable inorganic and organic
acids and bases. Examples of pharmaceutically acceptable, nontoxic
acid addition salts are salts of an amino group formed with
inorganic acids such as hydrochloric acid, hydrobromic acid,
phosphoric acid, sulfuric acid and perchloric acid or with organic
acids such as acetic acid, oxalic acid, maleic acid, tartaric acid,
citric acid, succinic acid or malonic acid or by using other
methods used in the art such as ion exchange. Other
pharmaceutically acceptable salts include adipate, alginate,
ascorbate, aspartate, benzenesulfonate, benzoate, bisulfate,
borate, butyrate, camphorate, camphorsulfonate, citrate,
cyclopentanepropionate, digluconate, dodecyl sulfate,
ethanesulfonate, formate, fumarate, glucoheptonate,
glycerophosphate, gluconate, hemisulfate, heptanoate, hexanoate,
hydroiodide, 2-hydroxy-ethanesulfonate, lactobionate, lactate,
laurate, lauryl sulfate, malate, maleate, malonate,
methanesulfonate, 2-naphthalenesulfonate, nicotinate, nitrate,
oleate, oxalate, palmitate, pamoate, pectinate, persulfate,
3-phenylpropionate, phosphate, pivalate, propionate, stearate,
succinate, sulfate, tartrate, thiocyanate, p-toluenesulfonate,
undecanoate, valerate salts, and the like.
[0043] Salts derived from appropriate bases include alkali metal,
alkaline earth metal, ammonium and N.sup.+(C.sub.1-4alkyl).sub.4
salts. Representative alkali or alkaline earth metal salts include
sodium, lithium, potassium, calcium, magnesium, and the like.
Further pharmaceutically acceptable salts include, when
appropriate, nontoxic ammonium, quaternary ammonium, and amine
cations formed using counterions such as halide, hydroxide,
carboxylate, sulfate, phosphate, nitrate, loweralkyl sulfonate and
aryl sulfonate.
[0044] Unless otherwise stated, structures depicted herein are also
meant to include all isomeric (e.g., enantiomeric, diastereomeric,
and geometric (or conformational)) forms of the structure; for
example, the R and S configurations for each asymmetric center, Z
and E double bond isomers, and Z and E conformational isomers.
Therefore, single stereochemical isomers as well as enantiomeric,
diastereomeric, and geometric (or conformational) mixtures of the
present compounds are within the scope of the invention. Unless
otherwise stated, all tautomeric forms of the compounds of the
invention are within the scope of the invention. Additionally,
unless otherwise stated, structures depicted herein are also meant
to include compounds that differ only in the presence of one or
more isotopically enriched atoms. For example, compounds having the
present structures including the replacement of hydrogen by
deuterium or tritium, or the replacement of a carbon by a .sup.13C-
or .sup.14C-enriched carbon are within the scope of this invention.
Such compounds are useful, for example, as analytical tools, as
probes in biological assays, or as therapeutic agents in accordance
with the present invention. In certain embodiments, a warhead
moiety, R.sup.1, of a provided compound comprises one or more
deuterium atoms. In certain embodiments, Ring B of a provided
compound may be substituted with one or more deuterium atoms.
[0045] As used herein, the term "inhibitor" is defined as a
compound that binds to and/or inhibits TYK2 with measurable
affinity. In certain embodiments, an inhibitor has an IC.sub.50
and/or binding constant of less than about 50 .mu.M, less than
about 1 .mu.M, less than about 500 nM, less than about 100 nM, less
than about 10 nM, or less than about 1 nM.
[0046] A compound of the present invention may be tethered to a
detectable moiety. It will be appreciated that such compounds are
useful as imaging agents. One of ordinary skill in the art will
recognize that a detectable moiety may be attached to a provided
compound via a suitable substituent. As used herein, the term
"suitable substituent" refers to a moiety that is capable of
covalent attachment to a detectable moiety. Such moieties are well
known to one of ordinary skill in the art and include groups
containing, e.g., a carboxylate moiety, an amino moiety, a thiol
moiety, or a hydroxyl moiety, to name but a few. It will be
appreciated that such moieties may be directly attached to a
provided compound or via a tethering group, such as a bivalent
saturated or unsaturated hydrocarbon chain. In some embodiments,
such moieties may be attached via click chemistry. In some
embodiments, such moieties may be attached via a 1,3-cycloaddition
of an azide with an alkyne, optionally in the presence of a copper
catalyst. Methods of using click chemistry are known in the art and
include those described by Rostovtsev et al., Angew. Chem. Int. Ed.
2002, 44, 2596-99 and Sun et al. Bioconjugate Chem., 2006, 17,
52-57.
[0047] As used herein, the term "detectable moiety" is used
interchangeably with the term "label" and relates to any moiety
capable of being detected, e.g., primary labels and secondary
labels. Primary labels, such as radioisotopes (e.g., tritium,
.sup.32P, .sup.33P, .sup.35S, or .sup.14C), mass-tags, and
fluorescent labels are signal generating reporter groups which can
be detected without further modifications. Detectable moieties also
include luminescent and phosphorescent groups.
[0048] The term "secondary label" as used herein refers to moieties
such as biotin and various protein antigens that require the
presence of a second intermediate for production of a detectable
signal. For biotin, the secondary intermediate may include
streptavidin-enzyme conjugates. For antigen labels, secondary
intermediates may include antibody-enzyme conjugates. Some
fluorescent groups act as secondary labels because they transfer
energy to another group in the process of nonradiative fluorescent
resonance energy transfer (FRET), and the second group produces the
detected signal.
[0049] The terms "fluorescent label", "fluorescent dye", and
"fluorophore" as used herein refer to moieties that absorb light
energy at a defined excitation wavelength and emit light energy at
a different wavelength. Examples of fluorescent labels include, but
are not limited to: Alexa Fluor dyes (Alexa Fluor 350, Alexa Fluor
488, Alexa Fluor 532, Alexa Fluor 546, Alexa Fluor 568, Alexa Fluor
594, Alexa Fluor 633, Alexa Fluor 660 and Alexa Fluor 680), AMCA,
AMCA-S, BODIPY dyes (BODIPY FL, BODIPY R6G, BODIPY TMR, BODIPY TR,
BODIPY 530/550, BODIPY 558/568, BODIPY 564/570, BODIPY 576/589,
BODIPY 581/591, BODIPY 630/650, BODIPY 650/665), Carboxyrhodamine
6G, carboxy-X-rhodamine (ROX), Cascade Blue, Cascade Yellow,
Coumarin 343, Cyanine dyes (Cy3, Cy5, Cy3.5, Cy5.5), Dansyl,
Dapoxyl, Dialkylaminocoumarin,
4',5'-Dichloro-2',7'-dimethoxy-fluorescein, DM-NERF, Eosin,
Erythrosin, Fluorescein, FAM, Hydroxycoumarin, IRDyes (IRD40, IRD
700, IRD 800), JOE, Lissamine rhodamine B, Marina Blue,
Methoxycoumarin, Naphthofluorescein, Oregon Green 488, Oregon Green
500, Oregon Green 514, Pacific Blue, PyMPO, Pyrene, Rhodamine B,
Rhodamine 6G, Rhodamine Green, Rhodamine Red, Rhodol Green,
2',4',5',7'-Tetra-bromosulfone-fluorescein, Tetramethyl-rhodamine
(TMR), Carboxytetramethylrhodamine (TAMRA), Texas Red, Texas
Red-X.
[0050] The term "mass-tag" as used herein refers to any moiety that
is capable of being uniquely detected by virtue of its mass using
mass spectrometry (MS) detection techniques. Examples of mass-tags
include electrophore release tags such as
N-[3-[4'-[(p-Methoxytetrafluorobenzyl)oxy]phenyl]-3-methylglyceronyl]ison-
ipecotic Acid,
4'-[2,3,5,6-Tetrafluoro-4-(pentafluorophenoxyl)]methyl
acetophenone, and their derivatives. The synthesis and utility of
these mass-tags is described in U.S. Pat. Nos. 4,650,750,
4,709,016, 5,360,8191, 5,516,931, 5,602,273, 5,604,104, 5,610,020,
and 5,650,270. Other examples of mass-tags include, but are not
limited to, nucleotides, dideoxynucleotides, oligonucleotides of
varying length and base composition, oligopeptides,
oligosaccharides, and other synthetic polymers of varying length
and monomer composition. A large variety of organic molecules, both
neutral and charged (biomolecules or synthetic compounds) of an
appropriate mass range (100-2000 Daltons) may also be used as
mass-tags.
[0051] The terms "measurable affinity" and "measurably inhibit," as
used herein, means a measurable change in a TYK2 protein kinase
activity between a sample comprising a compound of the present
invention, or composition thereof, and a TYK2 protein kinase, and
an equivalent sample comprising an TYK2 protein kinase, in the
absence of said compound, or composition thereof.
3. Description of Exemplary Embodiments
[0052] As described above, in certain embodiments, the present
invention provides a compound of formula I:
##STR00007##
or a pharmaceutically acceptable salt thereof, wherein: [0053] each
of X and Y is independently .dbd.C(R.sup.6)-- or .dbd.N--, provided
that X and Y are not simultaneously .dbd.C(R.sup.6)--; [0054] Ring
A is phenyl; a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; a 3-6
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; or a 4-6 membered saturated or partially
unsaturated carbocyclic ring; wherein Ring A is substituted with m
instances of R.sup.7; [0055] each of R.sup.1 and R.sup.1' is
independently hydrogen, --R.sup.2, halogen, --CN, --NO.sub.2, --OR,
--SR, --NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R,
--C(O)R, --C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R,
--OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; or [0056] R.sup.1 and R.sup.1' are taken
together to form an oxo group or with their intervening atoms to
form an optionally substituted 3-7 membered spiro-fused ring having
0-2 heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0057] each R.sup.2 is independently an optionally
substituted group selected from C.sub.1-6 aliphatic, phenyl, a 4-7
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur, and a 5-6 membered heteroaryl ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0058] R.sup.3 is a group selected from C.sub.1-6 alkyl,
phenyl, a 3-7 membered saturated or partially unsaturated
carbocyclic ring, a 3-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; wherein R.sup.3 is substituted with n instances
of R.sup.8; [0059] R.sup.4 is hydrogen or optionally substituted
C.sub.1-6 aliphatic; or [0060] R.sup.4 and one instance of R.sup.7
are taken together with their intervening atoms to form a 5-6
membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen and
sulfur; [0061] R.sup.5' is an 8-10 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur; wherein R.sup.5 is
substituted with p instances of R.sup.9; [0062] each instance of
R.sup.6, R.sup.7, R.sup.8, R.sup.10, and R.sup.11 is independently
--R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2,
--S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR,
--C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; [0063] each instance of R.sup.9 is independently
oxo, C.sub.1-6 hydroxyaliphatic, --R.sup.2, halogen, --CN,
--NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; [0064] L.sup.1 is a
covalent bond or a C.sub.1-6 bivalent saturated or unsaturated,
straight or branched hydrocarbon chain wherein one or two methylene
units of the chain are optionally and independently replaced by
--C(R.sup.10).sub.2--, --N(R)--, --N(R)C(O)--, --C(O)N(R)--,
--N(R)S(O).sub.2--, --S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--,
--C(O)O--, --S--, --S(O)-- or --S(O).sub.2--; or [0065] L.sup.1 and
one instance of R.sup.7 are taken together with their intervening
atoms to form a 5-10 membered partially unsaturated or aromatic
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen and sulfur; wherein said ring is substituted by q instances
of R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7; [0066] m is 0-4; [0067] n is 0-4;
[0068] p is 0-6; [0069] q is 0-4; and [0070] each R is
independently hydrogen, or an optionally substituted group selected
from C.sub.1-6 aliphatic, phenyl, a 4-7 membered saturated or
partially unsaturated heterocyclic having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur, and a 5-6
membered heteroaryl ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, or: [0071] two R groups
on the same nitrogen are taken together with their intervening
atoms to form a 4-7 membered saturated, partially unsaturated, or
heteroaryl ring having 0-3 heteroatoms, in addition to the
nitrogen, independently selected from nitrogen, oxygen, and
sulfur.
[0072] In certain embodiments, the present invention provides a
compound of formula II:
##STR00008##
or a pharmaceutically acceptable salt thereof, wherein: [0073] each
of X and Y is independently .dbd.C(R.sup.6)-- or .dbd.N--, provided
that X and Y are not simultaneously .dbd.C(R.sup.6)--; [0074] Ring
A is phenyl; a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; a 3-6
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; or a 4-6 membered saturated or partially
unsaturated carbocyclic ring; wherein Ring A is substituted with m
instances of R.sup.7; [0075] each of R.sup.1 and R.sup.1' is
independently hydrogen, --R.sup.2, halogen, --CN, --NO.sub.2, --OR,
--SR, --NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R,
--C(O)R, --C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R,
--OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; or [0076] R.sup.1 and R.sup.1' are taken
together to form an oxo group or with their intervening atoms to
form an optionally substituted 3-7 membered spiro-fused ring having
0-2 heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0077] each R.sup.2 is independently an optionally
substituted group selected from C.sub.1-6 aliphatic, phenyl, a 4-7
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur, and a 5-6 membered heteroaryl ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0078] R.sup.3 is a group selected from C.sub.1-6 alkyl,
phenyl, a 3-7 membered saturated or partially unsaturated
carbocyclic ring, a 3-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; wherein R.sup.3 is substituted with n instances
of R.sup.8; [0079] R.sup.4 is hydrogen or optionally substituted
C.sub.1-6 aliphatic; or [0080] R.sup.4 and one instance of R.sup.7
are taken together with their intervening atoms to form a 5-6
membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen and
sulfur; [0081] R.sup.5 is a group selected from hydrogen, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, --N(R)S(O).sub.2R, phenyl, a 3-10 membered
saturated or partially unsaturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur, and a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
R.sup.5 is substituted with p instances of R.sup.9; [0082] each
instance of R.sup.6, R.sup.7, R.sup.8, R.sup.10, and R.sup.11 is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; [0083] each instance of R.sup.9 is independently
oxo, C.sub.1-6 hydroxyaliphatic, --R.sup.2, halogen, --CN,
--NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; [0084] L.sup.1' is a
C.sub.1-6 bivalent saturated or unsaturated, straight or branched
hydrocarbon chain wherein at least one methylene unit of the chain
is replaced by --C(R.sup.10).sub.2--; and one or two additional
methylene units of the chain are optionally and independently
replaced by --N(R)--, --N(R)C(O)--, --C(O)N(R)--,
--N(R)S(O).sub.2--, --S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--,
--C(O)O--, --S--, --S(O)-- or --S(O).sub.2--; or [0085] L.sup.1'
and one instance of R.sup.7 are taken together with their
intervening atoms to form a 5-10 membered partially unsaturated or
aromatic ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen and sulfur; wherein said ring is substituted by q
instances of R.sup.11; and R.sup.5 is attached to any position of
the ring formed by L.sup.1' and R.sup.7; [0086] m is 0-4; [0087] n
is 0-4; [0088] p is 0-6; [0089] q is 0-4; and [0090] each R is
independently hydrogen, or an optionally substituted group selected
from C.sub.1-6 aliphatic, phenyl, a 4-7 membered saturated or
partially unsaturated heterocyclic having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur, and a 5-6
membered heteroaryl ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, or: [0091] two R groups
on the same nitrogen are taken together with their intervening
atoms to form a 4-7 membered saturated, partially unsaturated, or
heteroaryl ring having 0-3 heteroatoms, in addition to the
nitrogen, independently selected from nitrogen, oxygen, and
sulfur.
[0092] In certain embodiments, the present invention provides a
compound of formula III':
##STR00009##
or a pharmaceutically acceptable salt thereof, wherein: [0093] each
of X and Y is independently .dbd.C(R.sup.6)-- or .dbd.N--, provided
that X and Y are not simultaneously .dbd.C(R.sup.6)--; [0094] Ring
A is phenyl; a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; a 3-6
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; or a 4-6 membered saturated or partially
unsaturated carbocyclic ring; wherein Ring A is substituted with m
instances of R.sup.7; [0095] each of R.sup.1 and R.sup.1' is
independently hydrogen, --R.sup.2, halogen, --CN, --NO.sub.2, --OR,
--SR, --NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R,
--C(O)R, --C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R,
--OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; or [0096] R.sup.1 and R.sup.1' are taken
together to form an oxo group or with their intervening atoms to
form an optionally substituted 3-7 membered spiro-fused ring having
0-2 heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0097] each R.sup.2 is independently an optionally
substituted group selected from C.sub.1-6 aliphatic, phenyl, a 4-7
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur, and a 5-6 membered heteroaryl ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur; [0098] R.sup.3 is a group selected from C.sub.1-6 alkyl,
phenyl, a 3-7 membered saturated or partially unsaturated
carbocyclic ring, a 3-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; wherein R.sup.3 is substituted with n instances
of R.sup.8; [0099] R.sup.4' and one instance of R.sup.7 are taken
together with their intervening atoms to form a 5-6 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; [0100]
R.sup.5 is a group selected from halogen, --CN, --NO.sub.2, --OR,
--SR, --NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R,
--C(O)R, --C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R,
--OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2,
--N(R)S(O).sub.2R, phenyl, a 3-10 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, and a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; wherein R.sup.5 is substituted with p
instances of R.sup.9; [0101] each instance of R.sup.6, R.sup.7,
R.sup.8, R.sup.10, and R.sup.11 is independently --R.sup.2,
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; [0102] each instance of
R.sup.9 is independently oxo, C.sub.1-6 hydroxyaliphatic,
--R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2,
--S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR,
--C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; [0103] L.sup.1 is a covalent bond or a C.sub.1-6
bivalent saturated or unsaturated, straight or branched hydrocarbon
chain wherein one or two methylene units of the chain are
optionally and independently replaced by --C(R.sup.10).sub.2--,
--N(R)--, --N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--,
--S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--, --C(O)O--, --S--,
--S(O)-- or --S(O).sub.2--; or [0104] L.sup.1 and one instance of
R.sup.7 are taken together with their intervening atoms to form a
5-10 membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen and
sulfur; wherein said ring is substituted by q instances of
R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7; [0105] L.sup.2 is a C.sub.2-6
bivalent saturated or unsaturated, straight or branched hydrocarbon
chain wherein at least one methylene unit is replaced by
--N(R.sup.4)--; and one or two additional methylene units of the
chain are optionally and independently replaced by
--C(R.sup.10).sub.2--, --N(R)--, --N(R)C(O)--, --C(O)N(R)--,
--N(R)S(O).sub.2--, --S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--,
--C(O)O--, --S--, --S(O)-- or --S(O).sub.2--; or [0106] L.sup.2 is
--N(R.sup.4')--; [0107] m is 0-4; [0108] n is 0-4; [0109] p is 0-6;
[0110] q is 0-4; and [0111] each R is independently hydrogen, or an
optionally substituted group selected from C.sub.1-6 aliphatic,
phenyl, a 4-7 membered saturated or partially unsaturated
heterocyclic having 1-2 heteroatoms independently selected from
nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl ring
having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur, or: [0112] two R groups on the same nitrogen
are taken together with their intervening atoms to form a 4-7
membered saturated, partially unsaturated, or heteroaryl ring
having 0-3 heteroatoms, in addition to the nitrogen, independently
selected from nitrogen, oxygen, and sulfur.
[0113] In certain embodiments, the present invention provides a
compound of formula of formula III' wherein L.sup.2 is
--N(R.sup.4)--, thereby forming a compound of formula III:
##STR00010##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, R.sup.1, R.sup.1', L.sup.1, R.sup.3, R.sup.4, R.sup.4',
R.sup.5, is as defined above and described in embodiments herein,
both singly and in combination.
[0114] In certain embodiments, the present invention provides a
compound of formula IV:
##STR00011##
or a pharmaceutically acceptable salt thereof, wherein: [0115] each
of X and Y is independently .dbd.C(R.sup.6)-- or .dbd.N--, provided
that X and Y are not simultaneously .dbd.C(R.sup.6)--; [0116] Ring
A is phenyl; a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; a 3-6
membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; or a 4-6 membered saturated or partially
unsaturated carbocyclic ring; wherein Ring A is substituted with m
instances of R.sup.7; [0117] each R.sup.2 is independently an
optionally substituted group selected from C.sub.1-6 aliphatic,
phenyl, a 4-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur; [0118] R.sup.3 is a group selected from
C.sub.1-6 alkyl, phenyl, a 3-7 membered saturated or partially
unsaturated carbocyclic ring, a 3-7 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, and a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; wherein R.sup.3 is substituted with n
instances of R.sup.8; [0119] R.sup.4 is hydrogen or optionally
substituted C.sub.1-6 aliphatic; or [0120] R.sup.4 and one instance
of R.sup.7 are taken together with their intervening atoms to form
a 5-6 membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen and
sulfur; [0121] R.sup.5 is a group selected from halogen, --CN,
--NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, --N(R)S(O).sub.2R, phenyl, a 3-10 membered
saturated or partially unsaturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur, and a 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
R.sup.5 is substituted with p instances of R.sup.9; [0122] each
instance of R.sup.6, R.sup.7, R.sup.8, R.sup.10, and R.sup.11 is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; [0123] each instance of R.sup.9 is independently
oxo, C.sub.1-6 hydroxyaliphatic, --R.sup.2, halogen, --CN,
--NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R; [0124] L.sup.1 is a
covalent bond or a C.sub.1-6 bivalent saturated or unsaturated,
straight or branched hydrocarbon chain wherein one or two methylene
units of the chain are optionally and independently replaced by
--C(R.sup.10).sub.2--, --N(R)--, --N(R)C(O)--, --C(O)N(R)--,
--N(R)S(O).sub.2--, --S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--,
--C(O)O--, --S--, --S(O)-- or --S(O).sub.2--; or [0125] L.sup.1 and
one instance of R.sup.7 are taken together with their intervening
atoms to form a 5-10 membered partially unsaturated or aromatic
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen and sulfur; wherein said ring is substituted by q instances
of R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7; [0126] m is 0-4; [0127] n is 0-4;
[0128] p is 0-6; [0129] q is 0-4; and [0130] each R is
independently hydrogen, or an optionally substituted group selected
from C.sub.1-6 aliphatic, phenyl, a 4-7 membered saturated or
partially unsaturated heterocyclic having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur, and a 5-6
membered heteroaryl ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, or: [0131] two R groups
on the same nitrogen are taken together with their intervening
atoms to form a 4-7 membered saturated, partially unsaturated, or
heteroaryl ring having 0-3 heteroatoms, in addition to the
nitrogen, independently selected from nitrogen, oxygen, and
sulfur.
[0132] As defined generally above, each of X and Y is
.dbd.C(R.sup.6)-- or .dbd.N--, provided that X and Y are not
simultaneously .dbd.C(R.sup.6)--. In some embodiments, both X and Y
are .dbd.N--. In some embodiments, X is .dbd.N--, and Y is
.dbd.C(R.sup.6)--. In some embodiments, X is .dbd.C(R.sup.6)--, and
Y is .dbd.N--.
[0133] In some embodiments, each of X and Y is independently
.dbd.C(R.sup.6)--, .dbd.N--, or .dbd.N.sup.+(.fwdarw.O.sup.-)--,
provided that X and Y are not simultaneously .dbd.C(R.sup.6)--. In
some embodiments, X is .dbd.C(R.sup.6)--, and Y is
.dbd.N.sup.+(.fwdarw.O.sup.-)--.
[0134] As defined generally above, Ring A is phenyl; a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; or a 3-6 membered saturated or
partially unsaturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
Ring A is substituted with m instances of R.sup.7.
[0135] In some embodiments, Ring A is phenyl. In some embodiments,
Ring A is a 5-6 membered heteroaryl having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. Ring A is
a 5-membered heteroaryl having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
Ring A is a 6-membered heteroaryl having 1-4 nitrogens. In some
embodiments, Ring A is pyridyl. In some embodiments, Ring A is
pyrazolyl.
[0136] One of skill in the art will appreciate that a when Ring A
is a 5-6 membered heteroaryl ring, multiple regioisomers are
possible. Unless otherwise stated, all regioisomers are intended to
be encompassed. In some embodiments, Ring A is 2-pyridyl. In some
embodiments, Ring A is 3-pyridyl. In some embodiments, Ring A is
3-pyrazolyl. In some embodiments, Ring A is 4-pyrazolyl.
[0137] Likewise, when Ring A is phenyl, multiple attachment points
are possible. In some embodiments, when Ring A is phenyl, L.sup.1
is para to the point of attachment to the rest of the molecule. In
some embodiments, L.sup.1 is meta to the point of attachment to the
rest of the molecule. In some embodiments, L.sup.1 is ortho to the
point of attachment to the rest of the molecule. In some
embodiments, when Ring A is phenyl, and -L.sup.1R.sup.5 taken
together is C.sub.1-6 aliphatic, said -L.sup.1R.sup.5 group is para
to the point of attachment to the rest of the molecule.
[0138] As defined generally above, the n group of formula I is 0-4.
In some embodiments, n is 0. In some embodiments, n is 1-4. In
certain embodiments, n is 1. In some embodiments, n is 2. In
certain embodiments, n is 3. In certain embodiments, n is 4.
[0139] As defined generally above, each of R.sup.1 and R.sup.1' is
independently hydrogen, --R.sup.2, halogen, --CN, --NO.sub.2, --OR,
--SR, --NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R,
--C(O)R, --C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R,
--OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R; or R.sup.1 and R.sup.1' are taken together with
their intervening atoms to form an optionally substituted 4-7
membered spiro-fused ring having 0-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur.
[0140] In certain embodiments, each of R.sup.1 and R.sup.1' are
hydrogen. In some embodiments, each of R.sup.1 and R.sup.1' is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R. In certain embodiments, each of R.sup.1 and
R.sup.1' are methyl. In some embodiments, one of R.sup.1 and
R.sup.1' is methyl, and the other is hydrogen. In some embodiments,
R.sup.1 and R.sup.1' are taken together with their intervening
atoms to form an optionally substituted 3-7 membered spiro-fused
ring having 0-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.1 and R.sup.1' are
taken together with their intervening atoms to form an optionally
substituted 3-7 membered spiro-fused carbocyclic ring. In some
embodiments, R.sup.1 and R.sup.1' are taken together with their
intervening atoms to form an optionally substituted spirocycloprpyl
ring. In some embodiments, R.sup.1 and R.sup.1' are taken together
with their intervening atoms to form an optionally substituted 3-7
membered spiro-fused heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur.
[0141] As defined generally above, R.sup.3 is a group selected from
C.sub.1-6 alkyl, phenyl, a 3-7 membered saturated or partially
saturated carbocyclic ring, a 3-7 membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur, and a 5-6 membered
heteroaryl ring having 1-4 heteroatoms independently selected from
nitrogen, oxygen, and sulfur; wherein R.sup.3 is substituted with n
instances of R.sup.8.
[0142] In some embodiments, R.sup.3 is a group selected from
phenyl, a 3-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur.
[0143] In some embodiments, R.sup.3 is phenyl. In some embodiments,
when X is .dbd.N--, R.sup.3 is phenyl.
[0144] In some embodiments, R.sup.3 is a 3-7 membered saturated or
partially unsaturated carbocyclic ring. In some embodiments,
R.sup.3 is a 3-7 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.3 is
a 5-6 membered saturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments R.sup.3 is pyrrolidinyl. In some embodiments, R.sup.3
is piperidinyl.
[0145] In some embodiments, R.sup.3 is a 5-6 membered heteroaryl
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.3 is pyridinyl. In
some embodiments, R.sup.3 is a C.sub.3-6 saturated or partially
unsaturated carbocyclic ring. Exemplary R.sup.3 groups include
those depicted in Table 1.
[0146] As defined generally above, R.sup.4 is hydrogen or
optionally substituted C.sub.1-6 aliphatic. In some embodiments,
R.sup.4 is hydrogen. In some embodiments, R.sup.4 is optionally
substituted C.sub.1-6 aliphatic. In some embodiments, R.sup.4 is
unsubstituted C.sub.1-6 aliphatic. In some embodiments, R.sup.4 is
optionally substituted C.sub.1-6 alkyl. In some embodiments,
R.sup.4 is optionally substituted C.sub.3-6 cycloalkyl.
[0147] As defined generally above, L.sup.1 is a covalent bond or a
C.sub.1-6 bivalent saturated or unsaturated, straight or branched
hydrocarbon chain wherein one or two methylene units of the chain
are optionally and independently replaced by --N(R)--,
--N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--, --S(O).sub.2N(R)--,
--O--, --C(O)--, --OC(O)--, --C(O)O--, --S--, --S(O)-- or
--S(O).sub.2--; or L.sup.1 and one instance of R.sup.7 are taken
together with their intervening atoms to form a 5-6 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; wherein
said ring is substituted by q instances of R.sup.11; and R.sup.5 is
attached to any position of the ring formed by L.sup.1 and
R.sup.7.
[0148] In some embodiments, L.sup.1 is a covalent bond or a
C.sub.1-6 bivalent saturated or unsaturated, straight or branched
hydrocarbon chain wherein one or two methylene units of the chain
are optionally and independently replaced by --N(R)--,
--N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--, --S(O).sub.2N(R)--,
--O--, --C(O)--, --OC(O)--, --C(O)O--, --S--, --S(O)-- or
--S(O).sub.2--.
[0149] In some embodiments, L.sup.1 and one instance of R.sup.7 are
taken together with their intervening atoms to form a 5-6 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; wherein
said ring is substituted by q instances of R.sup.11; and R.sup.5 is
attached to any position of the ring formed by L.sup.1 and
R.sup.7.
[0150] In some embodiments, when L.sup.1 is a covalent bond,
R.sup.5 is not unsubstituted alkyl. In some embodiments, L.sup.1 is
a covalent bond. In other embodiments, L.sup.1 is a C.sub.1-6
bivalent hydrocarbon chain wherein one or two methylene units of
the chain are optionally and independently replaced by --N(R)--,
--N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--, --S(O).sub.2N(R)--,
--O--, --C(O)--, --OC(O)--, --C(O)O--, --S--, --S(O)-- or
--S(O).sub.2--. In some embodiments, L.sup.1 is a C.sub.2-6
bivalent branched hydrocarbon chain. In some embodiments, L.sup.1
is a C.sub.3-6 bivalent branched alkylene chain.
[0151] In some embodiments, L.sup.1 is a C.sub.2 bivalent
hydrocarbon chain wherein one methylene unit of the chain is
replaced by --C(O)--. In some embodiments, L.sup.1 is
--CH.sub.2C(O)-- (wherein the carbonyl is adjacent to R.sup.5). In
some embodiments, L.sup.1 is --C(O)--. In some embodiments, L.sup.1
is a covalent bond or --C(O)--. Exemplary L.sup.1 groups include
those depicted in Table 1.
[0152] In some embodiments, L.sup.1 is a covalent bond or a
C.sub.1-6 bivalent saturated or unsaturated, straight or branched
hydrocarbon chain wherein one or two methylene units of the chain
are optionally and independently replaced by --C(R.sup.10).sub.2--,
--N(R)--, --N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--,
--S(O).sub.2N(R)--, --O--, --C(O)--, --OC(O)--, --C(O)O--, --S--,
--S(O)-- or --S(O).sub.2--; or L.sup.1 and one instance of R.sup.7
are taken together with their intervening atoms to form a 5-10
membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, sulfur,
and boron; wherein said ring is substituted by q instances of
R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7. In some embodiments, L.sup.1 and one
instance of R.sup.7 are taken together with their intervening atoms
to form a 5-10 membered partially unsaturated or aromatic ring
having 1-4 heteroatoms independently selected from nitrogen,
oxygen, sulfur, and boron; wherein said ring is substituted by q
instances of R.sup.11; and R.sup.5 is attached to any position of
the ring formed by L.sup.1 and R.sup.7.
[0153] As defined generally above, L.sup.1' is a C.sub.1-6 bivalent
saturated or unsaturated, straight or branched hydrocarbon chain
wherein at least one methylene unit of the chain is replaced by
--C(R.sup.10).sub.2--; and one or two additional methylene units of
the chain are optionally and independently replaced by --N(R)--,
--N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--, --S(O).sub.2N(R)--,
--O--, --C(O)--, --OC(O)--, --C(O)O--, --S--, --S(O)-- or
--S(O).sub.2--; or L.sup.1 and one instance of R.sup.7 are taken
together with their intervening atoms to form a 5-10 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; wherein
said ring is substituted by q instances of R.sup.11; and R.sup.5 is
attached to any position of the ring formed by L.sup.1 and
R.sup.7.
[0154] In some embodiments, L.sup.1' is --C(R.sup.10).sub.2--. In
some embodiments, L.sup.1' and one instance of R.sup.7 are taken
together with their intervening atoms to form a 5-10 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen and sulfur; wherein
said ring is substituted by q instances of R.sup.11; and R.sup.5 is
attached to any position of the ring formed by L.sup.1' and
R.sup.7. In some embodiments, L.sup.1' and one instance of R.sup.7
are taken together with their intervening atoms to form a 5-6
membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen and
sulfur; wherein said ring is substituted by q instances of
R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7. In some embodiments, L.sup.1' and
one instance of R.sup.7 are taken together with their intervening
atoms to form a 7-10 membered partially unsaturated or aromatic
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen and sulfur; wherein said ring is substituted by q instances
of R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1 and R.sup.7. Exemplary L.sup.1 groups are
depicted in Table 1.
[0155] In some embodiments, L.sup.1' is a C.sub.1-6 bivalent
saturated or unsaturated, straight or branched hydrocarbon chain
wherein at least one methylene unit of the chain is replaced by
--C(R.sup.10).sub.2--; and one or two additional methylene units of
the chain are optionally and independently replaced by --N(R)--,
--N(R)C(O)--, --C(O)N(R)--, --N(R)S(O).sub.2--, --S(O).sub.2N(R)--,
--O--, --C(O)--, --OC(O)--, --C(O)O--, --S--, --S(O)-- or
--S(O).sub.2--; or L.sup.1' and one instance of R.sup.7 are taken
together with their intervening atoms to form a 5-10 membered
partially unsaturated or aromatic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, sulfur, and boron;
wherein said ring is substituted by q instances of R.sup.11; and
R.sup.5 is attached to any position of the ring formed by L.sup.1'
and R.sup.7. In some embodiments, L.sup.1' and one instance of
R.sup.7 are taken together with their intervening atoms to form a
5-10 membered partially unsaturated or aromatic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, sulfur,
and boron; wherein said ring is substituted by q instances of
R.sup.11; and R.sup.5 is attached to any position of the ring
formed by L.sup.1' and R.sup.7.
[0156] As defined generally above, R.sup.5 is a group selected from
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, --N(R)S(O).sub.2R, phenyl, 3-7 membered
saturated or partially unsaturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur, and 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
R.sup.5 is substituted with p instances of R.sup.9.
[0157] In some embodiments, R.sup.5 is selected from --OR,
--NR.sub.2, and a 3-10 membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.5 is
selected from --OH, --OEt, --NH.sub.2, NHEt, aziridinyl,
azetidinyl, pyrrolidinyl, piperidinyl, morpholinyl,
thiomorpholinyl, oxetanyl, tetrahydrothiopyranyl, and
tetrahydrofuranyl. In some embodiments, R.sup.5 is --OR. In some
embodiments, R.sup.5 is --NR.sub.2. In some embodiments, R.sup.5 is
--NHEt or --NH/Pr. Exemplary R.sup.5 groups include those depicted
in Table 1.
[0158] In some embodiments, R.sup.5 is a 4-10 membered saturated or
partially unsaturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 4-membered saturated heterocyclic ring
having 1 heteroatom selected from nitrogen, oxygen, and sulfur. In
some embodiments, R.sup.5 is an 5-membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 6-membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.5 is
an 7-membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is an 8-membered
saturated or partially unsaturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur. In some embodiments, R.sup.5 is an 9-membered saturated or
partially unsaturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 10-membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 8-membered saturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur. In some embodiments, R.sup.5 is an 9-membered saturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.5 is
an 10-membered saturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 7-10 membered saturated or partially
unsaturated spirocyclic heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 7-10 membered saturated or partially
unsaturated fused bicyclic heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur.
[0159] In some embodiments, R.sup.5 is a group selected from
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, --N(R)S(O).sub.2R, phenyl, 3-14 membered
saturated or partially unsaturated heterocyclic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur, and 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
R.sup.5 is substituted with p instances of R.sup.9. In some
embodiments, R.sup.5 is a group selected from a 3-14 membered
saturated or partially unsaturated heterocyclic ring having 1-4
heteroatoms independently selected from nitrogen, oxygen, and
sulfur, and 5-6 membered heteroaryl ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is a 3-14 membered saturated or partially
unsaturated heterocyclic ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is a group selected from a 10-14 membered saturated or
partially unsaturated heterocyclic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is a group selected from a 10-14 membered
saturated or partially unsaturated bicyclic heterocyclic ring
having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is a group
selected from a 10-14 membered saturated or partially unsaturated
tricyclic heterocyclic ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is a group selected from a 10-14 membered saturated or
partially unsaturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is a group selected from a 10-14 membered
saturated or partially unsaturated bicyclic heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is a group
selected from a 10-14 membered saturated or partially unsaturated
tricyclic heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur.
[0160] In some embodiments, R.sup.5' is an 8-10 membered saturated
or partially unsaturated bridged bicyclic heterocyclic ring having
1-2 heteroatoms independently selected from nitrogen, oxygen, and
sulfur.
[0161] As defined generally above, R.sup.5' is an 8-10 membered
saturated or partially unsaturated heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur; wherein R.sup.5 is substituted with p instances of R.sup.9.
In some embodiments, R.sup.5 is an 8-membered saturated or
partially unsaturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 9-membered saturated or partially
unsaturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 10-membered saturated or partially unsaturated
heterocyclic ring having 1-2 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.5 is
an 8-membered saturated heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 9-membered saturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is an 10-membered
saturated heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 8-10 membered saturated or partially unsaturated
spirocyclic heterocyclic ring having 1-2 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 8-10 membered saturated or partially unsaturated
fused bicyclic heterocyclic ring having 1-2 heteroatoms
independently selected from nitrogen, oxygen, and sulfur. In some
embodiments, R.sup.5 is an 8-10 membered saturated or partially
unsaturated bridged bicyclic heterocyclic ring having 1-2
heteroatoms independently selected from nitrogen, oxygen, and
sulfur.
[0162] In some embodiments, R.sup.5 is an 8-14 membered saturated
or partially unsaturated heterocyclic ring having 1-4 heteroatoms
independently selected from nitrogen, oxygen, and sulfur; wherein
R.sup.5 is substituted with p instances of R.sup.9. In some
embodiments, R.sup.5 is an 8-12 membered saturated or partially
unsaturated heterocyclic ring having 1-4 heteroatoms independently
selected from nitrogen, oxygen, and sulfur. In some embodiments,
R.sup.5 is an 10-14 membered saturated or partially unsaturated
heterocyclic ring having 1-4 heteroatoms independently selected
from nitrogen, oxygen, and sulfur. In some embodiments, R.sup.5 is
an 8-14 membered saturated or partially unsaturated heterocyclic
ring having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is an 8-14
membered saturated or partially unsaturated bicyclic heterocyclic
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.5 is an 8-14
membered saturated or partially unsaturated tricyclic heterocyclic
ring having 1-4 heteroatoms independently selected from nitrogen,
oxygen, and sulfur.
[0163] As defined generally above each instance of R.sup.6 is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R. In some embodiments R.sup.6 is halogen or --CN.
In some embodiments R.sup.6 is halogen. In some embodiments,
R.sup.6 is fluoro. In some embodiments, R.sup.6 is --CN.
[0164] In some embodiments, R.sup.6 is hydrogen, --R.sup.2,
halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R. In some embodiments,
R.sup.6 is hydrogen. In some embodiments R.sup.6 is halogen or
--CN. In some embodiments R.sup.6 is halogen. In some embodiments,
R.sup.6 is fluoro. In some embodiments, R.sup.6 is --CN.
[0165] As defined generally above, each instance of R.sup.7 is
--R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR, --NR.sub.2,
--S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR,
--C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R.
[0166] In some embodiments, R.sup.7 is oxo, --R.sup.2, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R.
[0167] As defined generally above, each instance of R.sup.8 is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R. In some embodiments, R.sup.8 is a halogen. In
some embodiments, R.sup.8 is fluorine. In some embodiments, R.sup.8
is chlorine. In some embodiments, R.sup.8 is optionally substituted
C.sub.1-6 aliphatic. In some embodiments, R.sup.8 is C.sub.1-6
alkyl. In some embodiments, R.sup.8 is methyl. In some embodiments,
R.sup.8 is alkyl substituted by one or more halogens. In some
embodiments, R.sup.8 is CF.sub.3. In some embodiments, each R.sup.8
is a halogen. In some embodiments, each R.sup.8 is fluorine,
chlorine, methyl, or CF.sub.3.
[0168] In some embodiments, R.sup.8 is oxo, --R.sup.2, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R.
[0169] One of ordinary skill in the art will appreciate that an
R.sup.8 substituent on a saturated carbon of R.sup.3 forms a chiral
center. In some embodiments, that chiral center is in the (R)
configuration. In other embodiments, that chiral center is in the
(S) configuration.
[0170] As defined generally above, each instance of R.sup.9 is
independently oxo, C.sub.1-6 hydroxyaliphatic, --R.sup.2, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R.
[0171] In some embodiments, R.sup.8 is oxo, --R.sup.2, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R.
[0172] In some embodiments, R.sup.9 is oxo. In some embodiments,
R.sup.9 is --R.sup.2. In some embodiments, R.sup.9 is optionally
substituted C.sub.1-6 aliphatic. In some embodiments, R.sup.9 is
C.sub.1-6 hydroxyaliphatic. In some embodiments, R.sup.9 is
hydroxymethyl. In some embodiments, R.sup.9 is hydroxyethyl. In
some embodiments, R.sup.9 is hydroxy cyclobutyl. In some
embodiments, R.sup.9 is hydroxy cyclobutyl. In some embodiments,
R.sup.9 is N,N-dimethylaminoethyl. In some embodiments, R.sup.9 is
a 3-7 membered saturated or partially unsaturated heterocyclic ring
having 1-2 heteroatoms independently selected from nitrogen,
oxygen, and sulfur. In some embodiments, R.sup.9 is selected from
--OH, --OEt, --NH.sub.2, NHEt, aziridinyl, azetidinyl,
pyrrolidinyl, piperidinyl, morpholinyl, thiomorpholinyl, oxetanyl,
tetrahydrothiopyranyl, and tetrahydrofuranyl. In some embodiments,
when L.sup.1 is absent, at least one R.sup.9 is oxo.
[0173] As defined generally above, each instance of R.sup.10 is
independently --R.sup.2, halogen, --CN, --NO.sub.2, --OR, --SR,
--NR.sub.2, --S(O).sub.2R, --S(O).sub.2NR.sub.2, --S(O)R, --C(O)R,
--C(O)OR, --C(O)NR.sub.2, --C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2,
--N(R)C(O)OR, --N(R)C(O)R, --N(R)C(O)NR.sub.2, or
--N(R)S(O).sub.2R.
[0174] In some embodiments, R.sup.10 is oxo, --R.sup.2, halogen,
--CN, --NO.sub.2, --OR, --SR, --NR.sub.2, --S(O).sub.2R,
--S(O).sub.2NR.sub.2, --S(O)R, --C(O)R, --C(O)OR, --C(O)NR.sub.2,
--C(O)N(R)OR, --OC(O)R, --OC(O)NR.sub.2, --N(R)C(O)OR, --N(R)C(O)R,
--N(R)C(O)NR.sub.2, or --N(R)S(O).sub.2R.
[0175] As defined generally above, m is 0-4. In some embodiments, m
is 0. In some embodiments, m is 1-4. In some embodiments, m is 1.
In some embodiments, m is 2. In some embodiments, m is 3. In some
embodiments, m is 4.
[0176] As defined generally above, n is 0-4. In some embodiments, n
is 0. In some embodiments, n is 1-4. In some embodiments, n is 1.
In some embodiments, n is 2. In some embodiments, n is 3. In some
embodiments, n is 4. In some embodiments, n is 0-1. In some
embodiments, n is 0-2. In some embodiments, n is 0-3.
[0177] As defined generally above, p is 0-6. In some embodiments, p
is 0. In some embodiments, p is 1-6. In some embodiments, p is 1.
In some embodiments, p is 2. In some embodiments, p is 3. In some
embodiments, p is 1-3. In some embodiments, p is 4. In some
embodiments, p is 5. In some embodiments, p is 6.
[0178] As defined generally above, q is 0-4. In some embodiments, q
is 0. In some embodiments, q is 1-4. In some embodiments, q is 1.
In some embodiments, q is 2. In some embodiments, q is 3. In some
embodiments, q is 4. In some embodiments, q is 0-1. In some
embodiments, q is 0-2. In some embodiments, q is 0-3.
[0179] In certain embodiments, the present invention provides a
compound of formula I, wherein when X is .dbd.N--, R.sup.3 is
phenyl.
[0180] In certain embodiments, the present invention provides a
compound of formulas I, II, or III, wherein R.sup.1 and R.sup.1'
are each hydrogen, thereby forming a compound of formulas I-a,
II-a, or III-a respectively:
##STR00012##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, L.sup.1', R.sup.3, R.sup.4, R.sup.4', R.sup.5,
and R.sup.5' is as defined above and described in embodiments
herein, both singly and in combination.
[0181] In certain embodiments, the present invention provides a
compound of formulas I, II, III, or IV wherein X is .dbd.N-- and Y
is .dbd.C(R.sup.6)--; thereby forming a compound of formula I-b,
II-b, III-b, or IV-b respectively:
##STR00013##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', and R.sup.6 is as defined above and
described in embodiments herein, both singly and in
combination.
[0182] In certain embodiments, the present invention provides a
compound of formulas I, II, III, or IV wherein X is
.dbd.C(R.sup.6)--; and Y is .dbd.N--, thereby forming a compound of
formula I-c, II-c, III-c, or IV-c respectively:
##STR00014##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', and R.sup.6 is as defined above and
described in embodiments herein, both singly and in
combination.
[0183] In certain embodiments, the present invention provides a
compound of formulas I, II, III, or IV wherein X is
.dbd.C(R.sup.6)--; and Y is .dbd.N.sup.+(.fwdarw.O.sup.-)--,
thereby forming a compound of formula I-c-i, II-c-i, III-c-i, or
IV-c-i respectively:
##STR00015##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', and R.sup.6 is as defined above and
described in embodiments herein, both singly and in
combination.
[0184] In certain embodiments, the present invention provides a
compound of formulas I, II, III, or IV wherein X and Y are each
.dbd.N--, thereby forming a compound of formula I-d, II-d, III-d,
or IV-d respectively:
##STR00016##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', and R.sup.6 is as defined above and
described in embodiments herein, both singly and in
combination.
[0185] In some embodiments, the present invention provides a
compound of any one of formulas I-b, I-c, II-b, II-c, III-b, III-c,
IV-b, or IV-c wherein R.sup.6 is hydrogen. In some embodiments, the
present invention provides a compound of any one of formulas I-b,
I-c, II-b, II-c, III-b, III-c, IV-b, or IV-c wherein R.sup.6 is
halogen. In some embodiments, the present invention provides a
compound of any one of formulas I-b, I-c, II-b, II-c, III-b, III-c,
IV-b, or IV-c wherein R.sup.6 is fluoro. In some embodiments, the
present invention provides a compound of any one of formulas I-b,
I-c, II-b, II-c, III-b, III-c, IV-b, or IV-c wherein R.sup.6 is
--CN.
[0186] In certain embodiments, the present invention provides a
compound of any one of formulas I, II, III, IV, I-a, II-a, III-a,
I-b, II-b, III-b, IV-b, I-c, II-c, III-c, IV-c, I-d, II-d, III-d,
or IV-d, wherein Ring A is phenyl, pyridin-2-yl, pyridine-3-yl,
pyrazinyl, pyridazinyl, or pyrazol-4-yl.
[0187] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
phenyl, and L.sup.1 is para to --N(R.sup.4)-- or --N(R.sup.4')--,
thereby forming a compound of one of formulas I-e, II-e, III-e, and
IV-e respectively:
##STR00017##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0188] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
pyridin-2-yl, and L.sup.1 is para to --N(R.sup.4)-- or
--N(R.sup.4')--, thereby forming a compound of one of formulas I-f,
II-f, III-f, and IV-f respectively:
##STR00018##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0189] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
pyridine-3-yl, and L.sup.1 is para to --N(R.sup.4)-- or
--N(R.sup.4')--, thereby forming a compound of one of formulas I-g,
II-g, III-g, and IV-g respectively:
##STR00019##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0190] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
pyridazinyl, and L.sup.1 is para to --N(R.sup.4)-- or
--N(R.sup.4')--, thereby forming a compound of one of formulas I-h,
II-h, III-h, and IV-h respectively:
##STR00020##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0191] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
pyrazinyl, and L.sup.1 is para to --N(R.sup.4)-- or
--N(R.sup.4')--, thereby forming a compound of one of formulas I-i,
II-i, III-i, and IV-i respectively:
##STR00021##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0192] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV wherein Ring A is
pyrazol-4-yl, and L.sup.1 is para to --N(R.sup.4)-- or
--N(R.sup.4')--, thereby forming a compound of one of formulas I-j,
II-j, III-j, and IV-j respectively:
##STR00022##
or a pharmaceutically acceptable salt thereof, wherein each of, X,
Y, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.3, R.sup.4,
R.sup.4', R.sup.5, R.sup.5', R.sup.7, and m is as defined above and
described in embodiments herein, both singly and in
combination.
[0193] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV, wherein R.sup.3 is
phenyl, pyrrolidinyl, or piperidinyl. In certain embodiments, the
present invention provides a compound of one of formulas I, II,
III, or IV, wherein R.sup.3 is phenyl, thereby forming a compound
of formula I-k, II-k, III-k, or IV-k, respectively:
##STR00023##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.4, R.sup.4',
R.sup.5, R.sup.5', R.sup.8, and n is as defined above and described
in embodiments herein, both singly and in combination.
[0194] In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV, or a
pharmaceutically acceptable salt thereof, wherein n is 1-3, and at
least one R.sup.8 substituent is ortho to the point of attachment.
In certain embodiments, the present invention provides a compound
of one of formulas I, II, III, or IV, or a pharmaceutically
acceptable salt thereof, wherein n is 1. In certain embodiments,
the present invention provides a compound of one of formulas I, II,
III, or IV, or a pharmaceutically acceptable salt thereof, wherein
n is 2. In certain embodiments, the present invention provides a
compound of one of formulas I, II, III, or IV, or a
pharmaceutically acceptable salt thereof, wherein n is 2, and at
least one R.sup.8 is halogen. In certain embodiments, the present
invention provides a compound of one of formulas I, II, III, or IV,
or a pharmaceutically acceptable salt thereof, wherein n is 2, and
at least one R.sup.8 is fluoro.
[0195] In certain embodiments, the present invention provides a
compound of one of formulas I-k, II-k, III-k, or IV-k, wherein n is
2 and each R.sup.8 is fluoro, thereby forming a compound of formula
I-l, II-l, III-l, or IV-l, respectively:
##STR00024##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, L.sup.1, L.sup.1', R.sup.1, R.sup.1', R.sup.4, R.sup.4',
R.sup.5, and R.sup.5', is as defined above and described in
embodiments herein, both singly and in combination.
[0196] In certain embodiments, the present invention provides a
compound of one of formulas I, III, or IV, wherein L.sup.1 is a
covalent bond or --C(O)--, thereby forming a compound of formula
I-m, III-m, or IV-m, respectively:
##STR00025##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, R.sup.1, R.sup.1', R.sup.3, R.sup.4, R.sup.4', R.sup.5,
and R.sup.5' is as defined above and described in embodiments
herein, both singly and in combination.
[0197] In certain embodiments, the present invention provides a
compound of one of formulas I, III, or IV, wherein L.sup.1 is
--C(O)--, thereby forming a compound of formula I-n, III-n, or
IV-n, respectively:
##STR00026##
or a pharmaceutically acceptable salt thereof, wherein each of X,
Y, Ring A, R.sup.1, R.sup.1', R.sup.3, R.sup.4, R.sup.4', R.sup.5,
and R.sup.5' is as defined above and described in embodiments
herein, both singly and in combination.
[0198] In certain embodiments, the present invention provides a
compound of one of formulas I-n, III-n, or IV-n, wherein X is
.dbd.C(R.sup.6)-- and Y is .dbd.N--, thereby forming a compound of
formula I-o, III-o, or IV-o, respectively:
##STR00027##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, R.sup.1, R.sup.1', R.sup.3, R.sup.4, R.sup.4', R.sup.5,
R.sup.5', and R.sup.6 is as defined above and described in
embodiments herein, both singly and in combination.
[0199] In certain embodiments, the present invention provides a
compound of one of formulas I-m, III-m, or IV-m, wherein X is
.dbd.C(R.sup.6)-- and Y is .dbd.N--, thereby forming a compound of
formula I-p, III-p, or IV-p, respectively:
##STR00028##
or a pharmaceutically acceptable salt thereof, wherein each of Ring
A, R.sup.1, R.sup.1', R.sup.3, R.sup.4, R.sup.4', R.sup.5,
R.sup.5', and R.sup.6 is as defined above and described in
embodiments herein, both singly and in combination.
[0200] Exemplary compounds of the invention are set forth in Table
1, below.
TABLE-US-00001 TABLE 1 Exemplary Compounds Com- pound # Structure
I-1 ##STR00029## I-2 ##STR00030## I-3 ##STR00031## I-4 ##STR00032##
I-5 ##STR00033## I-6 ##STR00034## I-7 ##STR00035## I-8 ##STR00036##
I-9 ##STR00037## I-10 ##STR00038## I-12 ##STR00039## I-13
##STR00040## I-14 ##STR00041## I-15 ##STR00042## I-16 ##STR00043##
I-17 ##STR00044## I-18 ##STR00045## I-19 ##STR00046## I-20
##STR00047## I-21 ##STR00048## I-22 ##STR00049## I-23 ##STR00050##
I-24 ##STR00051## I-25 ##STR00052## I-26 ##STR00053## I-27
##STR00054## I-28 ##STR00055## I-29 ##STR00056## I-30 ##STR00057##
I-31 ##STR00058## I-32 ##STR00059## I-33 ##STR00060## I-34
##STR00061## I-35 ##STR00062## I-36 ##STR00063## I-37 ##STR00064##
I-38 ##STR00065## I-39 ##STR00066## I-40 ##STR00067## I-41
##STR00068## I-42 ##STR00069## I-43 ##STR00070## I-44 ##STR00071##
I-45 ##STR00072## I-46 ##STR00073## I-47 ##STR00074## I-48
##STR00075## I-49 ##STR00076## I-50 ##STR00077## I-51 ##STR00078##
I-52 ##STR00079## I-53 ##STR00080## I-54 ##STR00081## I-55
##STR00082## I-56 ##STR00083## I-57 ##STR00084## I-58 ##STR00085##
I-59 ##STR00086## I-60 ##STR00087## I-61 ##STR00088## I-62
##STR00089## I-63 ##STR00090## I-64 ##STR00091## I-65 ##STR00092##
I-66 ##STR00093## I-67 ##STR00094## I-68 ##STR00095## I-69
##STR00096## I-70 ##STR00097## I-71 ##STR00098## I-72 ##STR00099##
I-73 ##STR00100## I-74 ##STR00101## I-75 ##STR00102## I-76
##STR00103## I-77 ##STR00104## I-78 ##STR00105## I-79 ##STR00106##
I-80 ##STR00107## I-81 ##STR00108## I-82 ##STR00109## I-83
##STR00110## I-84 ##STR00111## I-85 ##STR00112## I-86 ##STR00113##
I-87 ##STR00114## I-88 ##STR00115## I-89 ##STR00116## I-90
##STR00117## I-91 ##STR00118## I-92 ##STR00119## I-93
##STR00120##
[0201] In some embodiments, the method employs a compound set forth
in Table 1, above, or a pharmaceutically acceptable salt thereof.
In some embodiments, the present invention provides a compound set
forth in Table 1, above, or a pharmaceutically acceptable salt
thereof. In some embodiments, the present invention provides a
pharmaceutical composition comprising a compound set forth in Table
1 above, or a pharmaceutically acceptable salt thereof, together
with a pharmaceutically acceptable carrier, excipient, or
diluent.
[0202] Without wishing to be bound by any particular theory, it is
believed that proximity of an inhibitor compound, or pendant moiety
of an inhibitor compound, to the water of interest facilitates
displacement or disruption of that water by the inhibitor compound,
or pendant moiety of an inhibitor compound. In some embodiments, a
water molecule displaced or disrupted by an inhibitor compound, or
pendant moiety of an inhibitor compound, is an unstable water
molecule.
[0203] In certain embodiments, the method employs a complex
comprising TYK2 and an inhibitor, wherein at least one unstable
water of TYK2 is displaced or disrupted by the inhibitor. In some
embodiments, at least two unstable waters selected are displaced or
disrupted by the inhibitor.
4. General Methods of Providing the Present Compounds
[0204] The compounds of this invention may be prepared or isolated
in general by synthetic and/or semi-synthetic methods known to
those skilled in the art for analogous compounds and by methods
described in detail in the Examples, herein.
5. Uses, Formulation and Administration
[0205] Pharmaceutically Acceptable Compositions
[0206] According to another embodiment, the invention provides a
composition comprising a compound of this invention or a
pharmaceutically acceptable derivative thereof and a
pharmaceutically acceptable carrier, adjuvant, or vehicle. The
amount of compound in compositions of this invention is such that
is effective to measurably inhibit a TYK2 protein kinase, or a
mutant thereof, in a biological sample or in a patient. In certain
embodiments, the amount of compound in compositions of this
invention is such that is effective to measurably inhibit a TYK2
protein kinase, or a mutant thereof, in a biological sample or in a
patient. In certain embodiments, a composition of this invention is
formulated for administration to a patient in need of such
composition. In some embodiments, a composition of this invention
is formulated for oral administration to a patient.
[0207] The term "patient," as used herein, means an animal,
preferably a mammal, and most preferably a human.
[0208] The term "pharmaceutically acceptable carrier, adjuvant, or
vehicle" refers to a non-toxic carrier, adjuvant, or vehicle that
does not destroy the pharmacological activity of the compound with
which it is formulated. Pharmaceutically acceptable carriers,
adjuvants or vehicles that may be used in the compositions of this
invention include, but are not limited to, ion exchangers, alumina,
aluminum stearate, lecithin, serum proteins, such as human serum
albumin, buffer substances such as phosphates, glycine, sorbic
acid, potassium sorbate, partial glyceride mixtures of saturated
vegetable fatty acids, water, salts or electrolytes, such as
protamine sulfate, disodium hydrogen phosphate, potassium hydrogen
phosphate, sodium chloride, zinc salts, colloidal silica, magnesium
trisilicate, polyvinyl pyrrolidone, cellulose-based substances,
polyethylene glycol, sodium carboxymethylcellulose, polyacrylates,
waxes, polyethylene-polyoxypropylene-block polymers, polyethylene
glycol and wool fat.
[0209] A "pharmaceutically acceptable derivative" means any
non-toxic salt, ester, salt of an ester or other derivative of a
compound of this invention that, upon administration to a
recipient, is capable of providing, either directly or indirectly,
a compound of this invention or an inhibitorily active metabolite
or residue thereof.
[0210] As used herein, the term "inhibitorily active metabolite or
residue thereof" means that a metabolite or residue thereof is also
an inhibitor of a TYK2 protein kinase, or a mutant thereof.
[0211] Compositions of the present invention may be administered
orally, parenterally, by inhalation spray, topically, rectally,
nasally, buccally, vaginally or via an implanted reservoir. The
term "parenteral" as used herein includes subcutaneous,
intravenous, intramuscular, intra-articular, intra-synovial,
intrasternal, intrathecal, intrahepatic, intralesional and
intracranial injection or infusion techniques. Preferably, the
compositions are administered orally, intraperitoneally or
intravenously. Sterile injectable forms of the compositions of this
invention may be aqueous or oleaginous suspension. These
suspensions may be formulated according to techniques known in the
art using suitable dispersing or wetting agents and suspending
agents. The sterile injectable preparation may also be a sterile
injectable solution or suspension in a non-toxic parenterally
acceptable diluent or solvent, for example as a solution in
1,3-butanediol. Among the acceptable vehicles and solvents that may
be employed are water, Ringer's solution and isotonic sodium
chloride solution. In addition, sterile, fixed oils are
conventionally employed as a solvent or suspending medium.
[0212] For this purpose, any bland fixed oil may be employed
including synthetic mono- or di-glycerides. Fatty acids, such as
oleic acid and its glyceride derivatives are useful in the
preparation of injectables, as are natural
pharmaceutically-acceptable oils, such as olive oil or castor oil,
especially in their polyoxyethylated versions. These oil solutions
or suspensions may also contain a long-chain alcohol diluent or
dispersant, such as carboxymethyl cellulose or similar dispersing
agents that are commonly used in the formulation of
pharmaceutically acceptable dosage forms including emulsions and
suspensions. Other commonly used surfactants, such as Tweens, Spans
and other emulsifying agents or bioavailability enhancers which are
commonly used in the manufacture of pharmaceutically acceptable
solid, liquid, or other dosage forms may also be used for the
purposes of formulation.
[0213] Pharmaceutically acceptable compositions of this invention
may be orally administered in any orally acceptable dosage form
including, but not limited to, capsules, tablets, aqueous
suspensions or solutions. In the case of tablets for oral use,
carriers commonly used include lactose and corn starch. Lubricating
agents, such as magnesium stearate, are also typically added. For
oral administration in a capsule form, useful diluents include
lactose and dried cornstarch. When aqueous suspensions are required
for oral use, the active ingredient is combined with emulsifying
and suspending agents. If desired, certain sweetening, flavoring or
coloring agents may also be added.
[0214] Alternatively, pharmaceutically acceptable compositions of
this invention may be administered in the form of suppositories for
rectal administration. These can be prepared by mixing the agent
with a suitable non-irritating excipient that is solid at room
temperature but liquid at rectal temperature and therefore will
melt in the rectum to release the drug. Such materials include
cocoa butter, beeswax and polyethylene glycols.
[0215] Pharmaceutically acceptable compositions of this invention
may also be administered topically, especially when the target of
treatment includes areas or organs readily accessible by topical
application, including diseases of the eye, the skin, or the lower
intestinal tract. Suitable topical formulations are readily
prepared for each of these areas or organs.
[0216] Topical application for the lower intestinal tract can be
effected in a rectal suppository formulation (see above) or in a
suitable enema formulation. Topically-transdermal patches may also
be used.
[0217] For topical applications, provided pharmaceutically
acceptable compositions may be formulated in a suitable ointment
containing the active component suspended or dissolved in one or
more carriers. Carriers for topical administration of compounds of
this invention include, but are not limited to, mineral oil, liquid
petrolatum, white petrolatum, propylene glycol, polyoxyethylene,
polyoxypropylene compound, emulsifying wax and water.
Alternatively, provided pharmaceutically acceptable compositions
can be formulated in a suitable lotion or cream containing the
active components suspended or dissolved in one or more
pharmaceutically acceptable carriers. Suitable carriers include,
but are not limited to, mineral oil, sorbitan monostearate,
polysorbate 60, cetyl esters wax, cetearyl alcohol,
2-octyldodecanol, benzyl alcohol and water.
[0218] For ophthalmic use, provided pharmaceutically acceptable
compositions may be formulated as micronized suspensions in
isotonic, pH adjusted sterile saline, or, preferably, as solutions
in isotonic, pH adjusted sterile saline, either with or without a
preservative such as benzylalkonium chloride. Alternatively, for
ophthalmic uses, the pharmaceutically acceptable compositions may
be formulated in an ointment such as petrolatum.
[0219] Pharmaceutically acceptable compositions of this invention
may also be administered by nasal aerosol or inhalation. Such
compositions are prepared according to techniques well-known in the
art of pharmaceutical formulation and may be prepared as solutions
in saline, employing benzyl alcohol or other suitable
preservatives, absorption promoters to enhance bioavailability,
fluorocarbons, and/or other conventional solubilizing or dispersing
agents.
[0220] Most preferably, pharmaceutically acceptable compositions of
this invention are formulated for oral administration. Such
formulations may be administered with or without food. In some
embodiments, pharmaceutically acceptable compositions of this
invention are administered without food. In other embodiments,
pharmaceutically acceptable compositions of this invention are
administered with food.
[0221] The amount of compounds of the present invention that may be
combined with the carrier materials to produce a composition in a
single dosage form will vary depending upon the host treated, the
particular mode of administration. Preferably, provided
compositions should be formulated so that a dosage of between
0.01-100 mg/kg body weight/day of the inhibitor can be administered
to a patient receiving these compositions.
[0222] It should also be understood that a specific dosage and
treatment regimen for any particular patient will depend upon a
variety of factors, including the activity of the specific compound
employed, the age, body weight, general health, sex, diet, time of
administration, rate of excretion, drug combination, and the
judgment of the treating physician and the severity of the
particular disease being treated. The amount of a compound of the
present invention in the composition will also depend upon the
particular compound in the composition.
[0223] Uses of Compounds and Pharmaceutically Acceptable
Compositions
[0224] Compounds and compositions described herein are generally
useful for the inhibition of kinase activity of one or more
enzymes. In some embodiments the kinase inhibited by the compounds
and methods of the invention is TYK2
[0225] TYK2 is a non-receptor tyrosine kinase member of the Janus
kinase (JAKs) family of protein kinases. The mammalian JAK family
consists of four members, TYK2, JAK1, JAK2, and JAK3. JAK proteins,
including TYK2, are integral to cytokine signaling. TYK2 associates
with the cytoplasmic domain of type I and type II cytokine
receptors, as well as interferon types I and III receptors, and is
activated by those receptors upon cytokine binding. Cytokines
implicated in TYK2 activation include interferons (e.g.
IFN-.alpha., IFN-.beta., IFN-.kappa., IFN-.delta., IFN-.epsilon.,
IFN-.tau., IFN-.omega., and IFN-.zeta. (also known as limitin), and
interleukins (e.g. IL-4, IL-6, IL-10, IL-11, IL-12, IL-13, IL-22,
IL-23, IL-27, IL-31, oncostatin M, ciliary neurotrophic factor,
cardiotrophin 1, cardiotrophin-like cytokine, and LIF). Velasquez
et al., "A protein kinase in the interferon .alpha./.beta.
signaling pathway," Cell (1992) 70:313; Stahl et al., "Association
and activation of Jak-Tyk kinases by CNTF-LIF-OSM-IL-6.beta.
receptor components," Science (1994) 263:92; Finbloom et al.,
"IL-10 induces the tyrosine phosphorylation of Tyk2 and Jak1 and
the differential assembly of Stat1 and Stat3 complexes in human T
cells and monocytes," J. Immunol. (1995) 155:1079; Bacon et al.,
"Interleukin 12 (IL-12) induces tyrosine phosphorylation of Jak2
and Tyk2: differential use of Janus family kinases by IL-2 and
IL-12," J. Exp. Med. (1995) 181:399; Welham et al., "Interleukin-13
signal transduction in lymphohemopoietic cells: similarities and
differences in signal transduction with interleukin-4 and insulin,"
J. Biol. Chem. (1995) 270:12286; Parham et al., "A receptor for the
heterodimeric cytokine IL-23 is composed of IL-12R.beta.1 and a
novel cytokine receptor subunit, IL-23R," J. Immunol. (2002)
168:5699. The activated TYK2 then goes on to phosphorylate further
signaling proteins such as members of the STAT family, including
STAT1, STAT2, STAT4, and STAT6.
[0226] TYK2 activation by IL-23, has been linked to inflammatory
bowel disease (IBD), Crohn's disease, and ulcerative colitis. Duerr
et al., "A Genome-Wide Association Study Identifies IL23R as an
Inflammatory Bowel Disease Gene," Science (2006) 314:1461-1463. As
the downstream effector of IL-23, TYK2 also plays a role in
psoriasis, ankylosing spondylitis, and Beliefs disease. Cho et al.,
"Genomics and the multifactorial nature of human auto-immune
disease," N. Engl. J. Med (2011) 365:1612-1623; Cortes et al.,
"Identification of multiple risk variants for ankylosing
spondylitis through high-density genotyping of immune-related
loci," Nat. Genet. (2013) 45(7):730-738; Remmers et al.,
"Genome-wide association study identifies variants in the MHC class
I, IL10, and IL23R-IL12RB2 regions associated with Beliefs
disease," Nat. Genet. (2010) 42:698-702. A genome-wide association
study of 2,622 individuals with psoriasis identified associations
between disease susceptibility and TYK2. Strange et al., "A
genome-wide association study identifies new psoriasis
susceptibility loci and an interaction between HLA-C and ERAP1,"
Nat. Genet. (2010) 42:985-992. Knockout or tyrphostin inhibition of
TYK2 significantly reduces both IL-23 and IL-22-induced dermatitis.
Ishizaki et al., "Tyk2 is a therapeutic target for psoriasis-like
skin inflammation," Inti. Immunol. (2013), doi:
10.1093/intimm/dxt062.
[0227] TYK2 also plays a role in respiratory diseases such as
asthma, chronic obstructive pulmonary disease (COPD), lung cancer,
and cystic fibrosis. Goblet cell hyperplasia (GCH) and mucous
hypersecretion is mediated by IL-13-induced activation of TYK2,
which in turn activates STAT6. Zhang et al., "Docking protein Gab2
regulates mucin expression and goblet cell hyperplasia through
TYK2/STAT6 pathway," FASEB J. (2012) 26:1-11.
[0228] Decreased TYK2 activity leads to protection of joints from
collagen antibody-induced arthritis, a model of human rheumatoid
arthritis. Mechanistically, decreased Tyk2 activity reduced the
production of T.sub.h1/T.sub.h17-related cytokines and matrix
metalloproteases, and other key markers of inflammation. Ishizaki
et al., "Tyk2 deficiency protects joints against destruction in
anti-type II collagen antibody-induced arthritis in mice," Inti.
Immunol. (2011) 23(9):575-582.
[0229] TYK2 knockout mice showed complete resistance in
experimental autoimmune encephalomyelitis (EAE, an animal model of
multiple sclerosis (MS)), with no infiltration of CD4 T cells in
the spinal cord, as compared to controls, suggesting that TYK2 is
essential to pathogenic CD4-mediated disease development in MS.
Oyamada et al., "Tyrosine Kinase 2 Plays Critical Roles in the
Pathogenic CD4 T Cell Responses for the Development of Experimental
Autoimmune Encephalomyelitis," J. Immunol. (2009) 183:7539-7546.
This corroborates earlier studies linking increased TYK2 expression
with MS susceptibility. Ban et al., "Replication analysis
identifies TYK2 as a multiple sclerosis susceptibility factor," Eur
J. Hum. Genet. (2009) 17:1309-1313. Loss of function mutation in
TYK2, leads to decreased demyelination and increased remyelination
of neurons, further suggesting a role for TYK2 inhibitors in the
treatment of MS and other CNS demyelination disorders.
[0230] TYK2 is the sole signaling messenger common to both IL-12
and IL-23. TYK2 knockout reduced methylated BSA injection-induced
footpad thickness, imiquimod-induced psoriasis-like skin
inflammation, and dextran sulfate sodium or 2,4,6-trinitrobenzene
sulfonic acid-induced colitis in mice.
[0231] Joint linkage and association studies of various type I IFN
signaling genes with systemic lupus erythematosus (SLE, an
autoimmune disorder), showed a strong, and significant correlation
between loss of function mutations to TYK2 and decreased prevalence
of SLE in families with affected members. Sigurdsson et al.,
"Polymorphisms in the Tyrosine Kinase 2 and Interferon Regulatory
Factor 5 Genes Are Associated with Systemic Lupis Erythematosus,"
Am. J. Hum. Genet. (2005) 76:528-537. Genome-wide association
studies of individuals with SLE versus an unaffected cohort showed
highly significant correlation between the TYK2 locus and SLE.
Graham et al., "Association of NCF2, IKZF1, IRF8, IFIH1, and TYK2
with Systemic Lupus Erythematosus," PLoS Genetics (2011)
7(10):e1002341.
[0232] TYK2 has been shown to play an important role in maintaining
tumor surveillance and TYK2 knockout mice showed compromised
cytotoxic T cell response, and accelerated tumor development.
However, these effects were linked to the efficient suppression of
natural killer (NK) and cytotoxic T lymphocytes, suggesting that
TYK2 inhibitors would be highly suitable for the treatment of
autoimmune disorders or transplant rejection. Although other JAK
family members such as JAK3 have similar roles in the immune
system, TYK2 has been suggested as a superior target because of its
involvement in fewer and more closely related signaling pathways,
leading to fewer off-target effects. Simma et al. "Identification
of an Indispensable Role for Tyrosine Kinase 2 in CTL-Mediated
Tumor Surveillance," Cancer Res. (2009) 69:203-211.
[0233] However, paradoxically to the decreased tumor surveillance
observed by Simma et al., studies in T-cell acute lymphoblastic
leukemia (T-ALL) indicate that T-ALL is highly dependent on IL-10
via TYK2 via STAT1-mediated signal transduction to maintain cancer
cell survival through upregulation of anti-apoptotic protein BCL2.
Knockdown of TYK2, but not other JAK family members, reduced cell
growth. Specific activating mutations to TYK2 that promote cancer
cell survival include those to the FERM domain (G36D, S47N, and
R425H), the JH2 domain (V731I), and the kinase domain (E957D and
R1027H). However, it was also identified that the kinase function
of TYK2 is required for increased cancer cell survival, as TYK2
enzymes featuring kinase-dead mutations (M978Y or M978F) in
addition to an activating mutation (E957D) resulted in failure to
transform. Sanda et al. "TYK2-STAT1-BCL2 Pathway Dependence in
T-Cell Acute Lymphoblastic Leukemia," Cancer Disc. (2013)
3(5):564-577.
[0234] Thus, selective inhibition of TYK2 has been suggested as a
suitable target for patients with IL-10 and/or BCL2-addicted
tumors, such as 70% of adult T-cell leukemia cases. Fontan et al.
"Discovering What Makes STAT Signaling TYK in T-ALL," Cancer Disc.
(2013) 3:494-496.
[0235] TYK2 mediated STAT3 signaling has also been shown to mediate
neuronal cell death caused by amyloid-.beta. (A.beta.) peptide.
Decreased TYK2 phosphorylation of STAT3 following A.beta.
administration lead to decreased neuronal cell death, and increased
phosphorylation of STAT3 has been observed in postmorterm brains of
Alzheimer's patients. Wan et al. "Tyk/STAT3 Signaling Mediates
.beta.-Amyloid-Induced Neuronal Cell Death: Implications in
Alzheimer's Disease," J. Neurosci. (2010) 30(20):6873-6881.
[0236] Inhibition of JAK-STAT signaling pathways is also implicated
in hair growth, and the reversal of the hair loss associated with
alopecia areata. Xing et al., "Alopecia areata is driven by
cytotoxic T lymphocytes and is reversed by JAK inhibition," Nat.
Med. (2014) 20: 1043-1049; Harel et al., "Pharmacologic inhibition
of JAK-STAT signaling promotes hair growth," Sci. Adv. (2015)
1(9):e1500973.
[0237] Accordingly, compounds that inhibit the activity of TYK2 are
beneficial, especially those with selectivity over JAK2. Such
compounds should deliver a pharmacological response that favorably
treats one or more of the conditions described herein without the
side-effects associated with the inhibition of JAK2.
[0238] Even though TYK2 inhibitors are known in the art, there is a
continuing need to provide novel inhibitors having more effective
or advantageous pharmaceutically relevant properties. For example,
compounds with increased activity, selectivity over other JAK
kinases (especially JAK2), and ADMET (absorption, distribution,
metabolism, excretion, and/or toxicity) properties. Thus, in some
embodiments, the present invention provides inhibitors of TYK2
which show selectivity over JAK2.
[0239] The activity of a compound utilized in this invention as an
inhibitor of TYK2, or a mutant thereof, may be assayed in vitro, in
vivo or in a cell line. In vitro assays include assays that
determine inhibition of either the phosphorylation activity and/or
the subsequent functional consequences, or ATPase activity of
activated TYK2, or a mutant thereof. Alternate in vitro assays
quantitate the ability of the inhibitor to bind to TYK2. Inhibitor
binding may be measured by radiolabeling the inhibitor prior to
binding, isolating the inhibitor/TYK2 complex and determining the
amount of radiolabel bound. Alternatively, inhibitor binding may be
determined by running a competition experiment where new inhibitors
are incubated with TYK2 bound to known radioligands. Representative
in vitro and in vivo assays useful in assaying a TYK2 inhibitor
include those described and disclosed in, e.g., each of which is
herein incorporated by reference in its entirety. Detailed
conditions for assaying a compound utilized in this invention as an
inhibitor of TYK2, or a mutant thereof, are set forth in the
Examples below.
[0240] As used herein, the terms "treatment," "treat," and
"treating" refer to reversing, alleviating, delaying the onset of,
or inhibiting the progress of a disease or disorder, or one or more
symptoms thereof, as described herein. In some embodiments,
treatment may be administered after one or more symptoms have
developed. In other embodiments, treatment may be administered in
the absence of symptoms. For example, treatment may be administered
to a susceptible individual prior to the onset of symptoms (e.g.,
in light of a history of symptoms and/or in light of genetic or
other susceptibility factors). Treatment may also be continued
after symptoms have resolved, for example to prevent or delay their
recurrence.
[0241] Provided compounds are inhibitors of TYK2 and are therefore
useful for treating one or more disorders associated with activity
of TYK2 or mutants thereof. Thus, in certain embodiments, the
present invention provides a method for treating a TYK2-mediated
disorder comprising the step of administering to a patient in need
thereof a compound of the present invention, or pharmaceutically
acceptable composition thereof.
[0242] As used herein, the term "TYK2-mediated" disorders,
diseases, and/or conditions as used herein means any disease or
other deleterious condition in which TYK2 or a mutant thereof is
known to play a role. Accordingly, another embodiment of the
present invention relates to treating or lessening the severity of
one or more diseases in which TYK2, or a mutant thereof, is known
to play a role. Such TYK2-mediated disorders include but are not
limited to autoimmune disorders, inflammatory disorders,
proliferative disorders, endocrine disorders, neurological
disorders and disorders associated with transplantation.
[0243] In some embodiments, the present invention provides a method
for treating one or more disorders, wherein the disorders are
selected from autoimmune disorders, inflammatory disorders,
proliferative disorders, endocrine disorders, neurological
disorders, and disorders associated with transplantation, said
method comprising administering to a patient in need thereof, a
pharmaceutical composition comprising an effective amount of a
compound of the present invention, or a pharmaceutically acceptable
salt thereof.
[0244] In some embodiments, the disorder is an autoimmune disorder.
In some embodiments the disorder is selected from type 1 diabetes,
systemic lupus erythematosus, multiple sclerosis, psoriasis,
Behcet's disease, POEMS syndrome, Crohn's disease, ulcerative
colitis, and inflammatory bowel disease.
[0245] In some embodiments, the disorder is an inflammatory
disorder. In some embodiments, the inflammatory disorder is
rheumatoid arthritis, asthma, chronic obstructive pulmonary
disease, psoriasis, hepatomegaly, Crohn's disease, ulcerative
colitis, inflammatory bowel disease.
[0246] In some embodiments, the disorder is a proliferative
disorder. In some embodiments, the proliferative disorder is a
hematological cancer. In some embodiments the proliferative
disorder is a leukemia. In some embodiments, the leukemia is a
T-cell leukemia. In some embodiments the T-cell leukemia is T-cell
acute lymphoblastic leukemia (T-ALL). In some embodiments the
proliferative disorder is polycythemia vera, myelofibrosis,
essential or thrombocytosis.
[0247] In some embodiments, the disorder is an endocrine disorder.
In some embodiments, the endocrine disorder is polycystic ovary
syndrome, Crouzon's syndrome, or type 1 diabetes.
[0248] In some embodiments, the disorder is a neurological
disorder. In some embodiments, the neurological disorder is
Alzheimer's disease.
[0249] In some embodiments the proliferative disorder is associated
with one or more activating mutations in TYK2. In some embodiments,
the activating mutation in TYK2 is a mutation to the FERM domain,
the JH2 domain, or the kinase domain. In some embodiments the
activating mutation in TYK2 is selected from G36D, S47N, R425H,
V731I, E957D, and R1027H.
[0250] In some embodiments, the disorder is associated with
transplantation. In some embodiments the disorder associated with
transplantation is transplant rejection, or graft versus host
disease.
[0251] In some embodiments the disorder is associated with type I
interferon, IL-10, IL-12, or IL-23 signaling. In some embodiments
the disorder is associated with type I interferon signaling. In
some embodiments the disorder is associated with IL-10 signaling.
In some embodiments the disorder is associated with IL-12
signaling. In some embodiments the disorder is associated with
IL-23 signaling.
[0252] Compounds of the invention are also useful in the treatment
of inflammatory or allergic conditions of the skin, for example
psoriasis, contact dermatitis, atopic dermatitis, alopecia areata,
erythema multiforma, dermatitis herpetiformis, scleroderma,
vitiligo, hypersensitivity angiitis, urticaria, bullous pemphigoid,
lupus erythematosus, systemic lupus erythematosus, pemphigus
vulgaris, pemphigus foliaceus, paraneoplastic pemphigus,
epidermolysis bullosa acquisita, acne vulgaris, and other
inflammatory or allergic conditions of the skin.
[0253] Compounds of the invention may also be used for the
treatment of other diseases or conditions, such as diseases or
conditions having an inflammatory component, for example, treatment
of diseases and conditions of the eye such as ocular allergy,
conjunctivitis, keratoconjunctivitis sicca, and vernal
conjunctivitis, diseases affecting the nose including allergic
rhinitis, and inflammatory disease in which autoimmune reactions
are implicated or having an autoimmune component or etiology,
including autoimmune hematological disorders (e.g. hemolytic
anemia, aplastic anemia, pure red cell anemia and idiopathic
thrombocytopenia), systemic lupus erythematosus, rheumatoid
arthritis, polychondritis, scleroderma, Wegener granulamatosis,
dermatomyositis, chronic active hepatitis, myasthenia gravis,
Steven-Johnson syndrome, idiopathic sprue, autoimmune inflammatory
bowel disease (e.g. ulcerative colitis and Crohn's disease),
irritable bowel syndrome, celiac disease, periodontitis, hyaline
membrane disease, kidney disease, glomerular disease, alcoholic
liver disease, multiple sclerosis, endocrine opthalmopathy, Grave's
disease, sarcoidosis, alveolitis, chronic hypersensitivity
pneumonitis, multiple sclerosis, primary biliary cirrhosis, uveitis
(anterior and posterior), Sjogren's syndrome, keratoconjunctivitis
sicca and vernal keratoconjunctivitis, interstitial lung fibrosis,
psoriatic arthritis, systemic juvenile idiopathic arthritis,
cryopyrin-associated periodic syndrome, nephritis, vasculitis,
diverticulitis, interstitial cystitis, glomerulonephritis (with and
without nephrotic syndrome, e.g. including idiopathic nephrotic
syndrome or minal change nephropathy), chronic granulomatous
disease, endometriosis, leptospiriosis renal disease, glaucoma,
retinal disease, ageing, headache, pain, complex regional pain
syndrome, cardiac hypertrophy, musclewasting, catabolic disorders,
obesity, fetal growth retardation, hyperchlolesterolemia, heart
disease, chronic heart failure, mesothelioma, anhidrotic ecodermal
dysplasia, Behcet's disease, incontinentia pigmenti, Paget's
disease, pancreatitis, hereditary periodic fever syndrome, asthma
(allergic and non-allergic, mild, moderate, severe, bronchitic, and
exercise-induced), acute lung injury, acute respiratory distress
syndrome, eosinophilia, hypersensitivities, anaphylaxis, nasal
sinusitis, ocular allergy, silica induced diseases, COPD (reduction
of damage, airways inflammation, bronchial hyperreactivity,
remodeling or disease progression), pulmonary disease, cystic
fibrosis, acid-induced lung injury, pulmonary hypertension,
polyneuropathy, cataracts, muscle inflammation in conjunction with
systemic sclerosis, inclusion body myositis, myasthenia gravis,
thyroiditis, Addison's disease, lichen planus, Type 1 diabetes, or
Type 2 diabetes, appendicitis, atopic dermatitis, asthma, allergy,
blepharitis, bronchiolitis, bronchitis, bursitis, cervicitis,
cholangitis, cholecystitis, chronic graft rejection, colitis,
conjunctivitis, Crohn's disease, cystitis, dacryoadenitis,
dermatitis, dermatomyositis, encephalitis, endocarditis,
endometritis, enteritis, enterocolitis, epicondylitis,
epididymitis, fasciitis, fibrositis, gastritis, gastroenteritis,
Henoch-Schonlein purpura, hepatitis, hidradenitis suppurativa,
immunoglobulin A nephropathy, interstitial lung disease,
laryngitis, mastitis, meningitis, myelitis myocarditis, myositis,
nephritis, oophoritis, orchitis, osteitis, otitis, pancreatitis,
parotitis, pericarditis, peritonitis, pharyngitis, pleuritis,
phlebitis, pneumonitis, pneumonia, polymyositis, proctitis,
prostatitis, pyelonephritis, rhinitis, salpingitis, sinusitis,
stomatitis, synovitis, tendonitis, tonsillitis, ulcerative colitis,
uveitis, vaginitis, vasculitis, or vulvitis.
[0254] In certain embodiments, the present invention provides a
method of treating alopecia areata.
[0255] In some embodiments the inflammatory disease which can be
treated according to the methods of this invention is selected from
acute and chronic gout, chronic gouty arthritis, psoriasis,
psoriatic arthritis, rheumatoid arthritis, Juvenile rheumatoid
arthritis, Systemic jubenile idiopathic arthritis (SJIA), Cryopyrin
Associated Periodic Syndrome (CAPS), and osteoarthritis.
[0256] In some embodiments the inflammatory disease which can be
treated according to the methods of this invention is a T.sub.h1 or
T.sub.h17 mediated disease. In some embodiments the T.sub.h17
mediated disease is selected from Systemic lupus erythematosus,
Multiple sclerosis, and inflammatory bowel disease (including
Crohn's disease or ulcerative colitis).
[0257] In some embodiments the inflammatory disease which can be
treated according to the methods of this invention is selected from
Sjogren's syndrome, allergic disorders, osteoarthritis, conditions
of the eye such as ocular allergy, conjunctivitis,
keratoconjunctivitis sicca and vernal conjunctivitis, and diseases
affecting the nose such as allergic rhinitis.
[0258] Furthermore, the invention provides the use of a compound
according to the definitions herein, or a pharmaceutically
acceptable salt, or a hydrate or solvate thereof for the
preparation of a medicament for the treatment of an autoimmune
disorder, an inflammatory disorder, or a proliferative disorder, or
a disorder commonly occurring in connection with
transplantation.
[0259] Combination Therapies
[0260] Depending upon the particular condition, or disease, to be
treated, additional therapeutic agents, which are normally
administered to treat that condition, may be administered in
combination with compounds and compositions of this invention. As
used herein, additional therapeutic agents that are normally
administered to treat a particular disease, or condition, are known
as "appropriate for the disease, or condition, being treated."
[0261] In certain embodiments, a provided combination, or
composition thereof, is administered in combination with another
therapeutic agent.
[0262] Examples of agents the combinations of this invention may
also be combined with include, without limitation: treatments for
Alzheimer's Disease such as Aricept.RTM. and Excelon.RTM.;
treatments for HIV such as ritonavir; treatments for Parkinson's
Disease such as L-DOPA/carbidopa, entacapone, ropinrole,
pramipexole, bromocriptine, pergolide, trihexephendyl, and
amantadine; agents for treating Multiple Sclerosis (MS) such as
beta interferon (e.g., Avonex.RTM. and Rebif.RTM.), Copaxone.RTM.,
and mitoxantrone; treatments for asthma such as albuterol and
Singulair.RTM.; agents for treating schizophrenia such as zyprexa,
risperdal, seroquel, and haloperidol; anti-inflammatory agents such
as corticosteroids, TNF blockers, IL-1 RA, azathioprine,
cyclophosphamide, and sulfasalazine; immunomodulatory and
immunosuppressive agents such as cyclosporin, tacrolimus,
rapamycin, mycophenolate mofetil, interferons, corticosteroids,
cyclophophamide, azathioprine, and sulfasalazine; neurotrophic
factors such as acetylcholinesterase inhibitors, MAO inhibitors,
interferons, anti-convulsants, ion channel blockers, riluzole, and
anti-Parkinsonian agents; agents for treating cardiovascular
disease such as beta-blockers, ACE inhibitors, diuretics, nitrates,
calcium channel blockers, and statins; agents for treating liver
disease such as corticosteroids, cholestyramine, interferons, and
anti-viral agents; agents for treating blood disorders such as
corticosteroids, anti-leukemic agents, and growth factors; agents
that prolong or improve pharmacokinetics such as cytochrome P450
inhibitors (i.e., inhibitors of metabolic breakdown) and CYP3A4
inhibitors (e.g., ketokenozole and ritonavir), and agents for
treating immunodeficiency disorders such as gamma globulin.
[0263] In certain embodiments, combination therapies of the present
invention, or a pharmaceutically acceptable composition thereof,
are administered in combination with a monoclonal antibody or an
siRNA therapeutic.
[0264] Those additional agents may be administered separately from
a provided combination therapy, as part of a multiple dosage
regimen. Alternatively, those agents may be part of a single dosage
form, mixed together with a compound of this invention in a single
composition. If administered as part of a multiple dosage regime,
the two active agents may be submitted simultaneously, sequentially
or within a period of time from one another normally within five
hours from one another.
[0265] As used herein, the term "combination," "combined," and
related terms refers to the simultaneous or sequential
administration of therapeutic agents in accordance with this
invention. For example, a combination of the present invention may
be administered with another therapeutic agent simultaneously or
sequentially in separate unit dosage forms or together in a single
unit dosage form.
[0266] The amount of additional therapeutic agent present in the
compositions of this invention will be no more than the amount that
would normally be administered in a composition comprising that
therapeutic agent as the only active agent. Preferably the amount
of additional therapeutic agent in the presently disclosed
compositions will range from about 50% to 100% of the amount
normally present in a composition comprising that agent as the only
therapeutically active agent.
[0267] In one embodiment, the present invention provides a
composition comprising a compound of formula I and one or more
additional therapeutic agents. The therapeutic agent may be
administered together with a compound of formula I, or may be
administered prior to or following administration of a compound of
formula I. Suitable therapeutic agents are described in further
detail below. In certain embodiments, a compound of formula I may
be administered up to 5 minutes, 10 minutes, 15 minutes, 30
minutes, 1 hour, 2 hours, 3 hours, 4 hours, 5, hours, 6 hours, 7
hours, 8 hours, 9 hours, 10 hours, 11 hours, 12 hours, 13 hours, 14
hours, 15 hours, 16 hours, 17 hours, or 18 hours before the
therapeutic agent. In other embodiments, a compound of formula I
may be administered up to 5 minutes, 10 minutes, 15 minutes, 30
minutes, 1 hour, 2 hours, 3 hours, 4 hours, 5, hours, 6 hours, 7
hours, 8 hours, 9 hours, 10 hours, 11 hours, 12 hours, 13 hours, 14
hours, 15 hours, 16 hours, 17 hours, or 18 hours following the
therapeutic agent.
[0268] In another embodiment, the present invention provides a
method of treating an inflammatory disease, disorder or condition
by administering to a patient in need thereof a compound of formula
I and one or more additional therapeutic agents. Such additional
therapeutic agents may be small molecules or recombinant biologic
agents and include, for example, acetaminophen, non-steroidal
anti-inflammatory drugs (NSAIDS) such as aspirin, ibuprofen,
naproxen, etodolac (Lodine.RTM.) and celecoxib, colchicine
(Colcrys.RTM.), corticosteroids such as prednisone, prednisolone,
methylprednisolone, hydrocortisone, and the like, probenecid,
allopurinol, febuxostat (Uloric.RTM.), sulfasalazine
(Azulfidine.RTM.), antimalarials such as hydroxychloroquine
(Plaquenil.RTM.) and chloroquine (Aralen.RTM.), methotrexate
(Rheumatrex.RTM.), gold salts such as gold thioglucose
(Solganal.RTM.), gold thiomalate (Myochrysine.RTM.) and auranofin
(Ridaura.RTM.), D-penicillamine (Depen.RTM. or Cuprimine.RTM.),
azathioprine (Imuran.RTM.), cyclophosphamide (Cytoxan.RTM.),
chlorambucil (Leukeran.RTM.), cyclosporine (Sandimmune.RTM.),
leflunomide (Arava.RTM.) and "anti-TNF" agents such as etanercept
(Enbrel.RTM.), infliximab (Remicade.RTM.), golimumab
(Simponi.RTM.), certolizumab pegol (Cimzia.RTM.) and adalimumab
(Humira.RTM.), "anti-IL-1" agents such as anakinra (Kineret.RTM.)
and rilonacept (Arcalyst.RTM.), canakinumab (Ilaris.RTM.), anti-Jak
inhibitors such as tofacitinib, antibodies such as rituximab
(Rituxan.RTM.), "anti-T-cell" agents such as abatacept
(Orencia.RTM.), "anti-IL-6" agents such as tocilizumab
(Actemra.RTM.), diclofenac, cortisone, hyaluronic acid
(Synvisc.RTM. or Hyalgan.RTM.), monoclonal antibodies such as
tanezumab, anticoagulants such as heparin (Calcinparine.RTM. or
Liquaemin.RTM.) and warfarin (Coumadin.RTM.), antidiarrheals such
as diphenoxylate (Lomotil.RTM.) and loperamide (Imodium.RTM.), bile
acid binding agents such as cholestyramine, alosetron
(Lotronex.RTM.), lubiprostone (Amitiza.RTM.), laxatives such as
Milk of Magnesia, polyethylene glycol (MiraLax.RTM.),
Dulcolax.RTM., Correctol.RTM. and Senokot.RTM., anticholinergics or
antispasmodics such as dicyclomine (Bentyl.RTM.), Singulair.RTM.,
beta-2 agonists such as albuterol (Ventolin.RTM. HFA,
Proventil.RTM. HFA), levalbuterol (Xopenex.RTM.), metaproterenol
(Alupent.RTM.), pirbuterol acetate (Maxair.RTM.), terbutaline
sulfate (Brethaire.RTM.), salmeterol xinafoate (Serevent.RTM.) and
formoterol (Foradil.RTM.), anticholinergic agents such as
ipratropium bromide (Atrovent.RTM.) and tiotropium (Spiriva.RTM.),
inhaled corticosteroids such as beclomethasone dipropionate
(Beclovent.RTM., Qvar.RTM., and Vanceril.RTM.), triamcinolone
acetonide (Azmacort.RTM.), mometasone (Asthmanex.RTM.), budesonide
(Pulmocort.RTM.), and flunisolide (Aerobid.RTM.), Afviar.RTM.,
Symbicort.RTM., Dulera.RTM., cromolyn sodium (Intal.RTM.),
methylxanthines such as theophylline (Theo-Dur.RTM., Theolair.RTM.,
Slo-bid.RTM., Uniphyl.RTM., Theo-24.RTM.) and aminophylline, IgE
antibodies such as omalizumab (Xolair.RTM.), nucleoside reverse
transcriptase inhibitors such as zidovudine (Retrovir.RTM.),
abacavir (Ziagen.RTM.), abacavir/lamivudine (Epzicom.RTM.),
abacavir/lamivudine/zidovudine (Trizivir.RTM.), didanosine
(Videx.RTM.), emtricitabine (Emtriva.RTM.), lamivudine
(Epivir.RTM.), lamivudine/zidovudine (Combivir.RTM.), stavudine
(Zerit.RTM.), and zalcitabine (Hivid.RTM.), non-nucleoside reverse
transcriptase inhibitors such as delavirdine (Rescriptor.RTM.),
efavirenz (Sustiva.RTM.), nevairapine (Viramune.RTM.) and
etravirine (Intelence.RTM.), nucleotide reverse transcriptase
inhibitors such as tenofovir (Viread.RTM.), protease inhibitors
such as amprenavir (Agenerase.RTM.), atazanavir (Reyataz.RTM.),
darunavir (Prezista.RTM.), fosamprenavir (Lexiva.RTM.), indinavir
(Crixivan.RTM.), lopinavir and ritonavir (Kaletra.RTM.), nelfmavir
(Viracept.RTM.), ritonavir (Norvir.RTM.), saquinavir
(Fortovase.RTM. or Invirase.RTM.), and tipranavir (Aptivus.RTM.),
entry inhibitors such as enfuvirtide (Fuzeon.RTM.) and maraviroc
(Selzentry.RTM.), integrase inhibitors such as raltegravir
(Isentress.RTM.), doxorubicin (Hydrodaunorubicin.RTM.), vincristine
(Oncovin.RTM.), bortezomib (Velcade.RTM.), and dexamethasone
(Decadron.RTM.) in combination with lenalidomide (Revlimid.RTM.),
or any combination(s) thereof.
[0269] In another embodiment, the present invention provides a
method of treating rheumatoid arthritis comprising administering to
a patient in need thereof a compound of formula I and one or more
additional therapeutic agents selected from non-steroidal
anti-inflammatory drugs (NSAIDS) such as aspirin, ibuprofen,
naproxen, etodolac (Lodine.RTM.) and celecoxib, corticosteroids
such as prednisone, prednisolone, methylprednisolone,
hydrocortisone, and the like, sulfasalazine (Azulfidine.RTM.),
antimalarials such as hydroxychloroquine (Plaquenil.RTM.) and
chloroquine (Aralen.RTM.), methotrexate (Rheumatrex.RTM.), gold
salts such as gold thioglucose (Solganal.RTM.), gold thiomalate
(Myochrysine.RTM.) and auranofin (Ridaura.RTM.), D-penicillamine
(Depen.RTM. or Cuprimine.RTM.), azathioprine (Imuran.RTM.),
cyclophosphamide (Cytoxan.RTM.), chlorambucil (Leukeran.RTM.),
cyclosporine (Sandimmune.RTM.), leflunomide (Arava.RTM.) and
"anti-TNF" agents such as etanercept (Enbrel.RTM.), infliximab
(Remicade.RTM.), golimumab (Simponi.RTM.), certolizumab pegol
(Cimzia.RTM.) and adalimumab (Humira.RTM.), "anti-IL-1" agents such
as anakinra (Kineret.RTM.) and rilonacept (Arcalyst.RTM.),
antibodies such as rituximab (Rituxan.RTM.), "anti-T-cell" agents
such as abatacept (Orencia.RTM.) and "anti-IL-6" agents such as
tocilizumab (Actemra.RTM.).
[0270] In some embodiments, the present invention provides a method
of treating osteoarthritis comprising administering to a patient in
need thereof a compound of formula I and one or more additional
therapeutic agents selected from acetaminophen, non-steroidal
anti-inflammatory drugs (NSAIDS) such as aspirin, ibuprofen,
naproxen, etodolac (Lodine.RTM.) and celecoxib, diclofenac,
cortisone, hyaluronic acid (Synvisc.RTM. or Hyalgan.RTM.) and
monoclonal antibodies such as tanezumab.
[0271] In some embodiments, the present invention provides a method
of treating systemic lupus erythematosus comprising administering
to a patient in need thereof a compound of formula I and one or
more additional therapeutic agents selected from acetaminophen,
non-steroidal anti-inflammatory drugs (NSAIDS) such as aspirin,
ibuprofen, naproxen, etodolac (Lodine.RTM.) and celecoxib,
corticosteroids such as prednisone, prednisolone,
methylprednisolone, hydrocortisone, and the like, antimalarials
such as hydroxychloroquine (Plaquenil.RTM.) and chloroquine
(Aralen.RTM.), cyclophosphamide (Cytoxan.RTM.), methotrexate
(Rheumatrex.RTM.), azathioprine (Imuran.RTM.) and anticoagulants
such as heparin (Calcinparine.RTM. or Liquaemin.RTM.) and warfarin
(Coumadin.RTM.).
[0272] In some embodiments, the present invention provides a method
of treating Crohn's disease, ulcerative colitis, or inflammatory
bowel disease comprising administering to a patient in need thereof
a compound of formula I and one or more additional therapeutic
agents selected from mesalamine (Asacol.RTM.) sulfasalazine
(Azulfidine.RTM.), antidiarrheals such as diphenoxylate
(Lomotil.RTM.) and loperamide (Imodium.RTM.), bile acid binding
agents such as cholestyramine, alosetron (Lotronex.RTM.),
lubiprostone (Amitiza.RTM.), laxatives such as Milk of Magnesia,
polyethylene glycol (MiraLax.RTM.), Dulcolax.RTM., Correctol.RTM.
and Senokot.RTM. and anticholinergics or antispasmodics such as
dicyclomine (Bentyl.RTM.), anti-TNF therapies, steroids, and
antibiotics such as Flagyl or ciprofloxacin.
[0273] In some embodiments, the present invention provides a method
of treating asthma comprising administering to a patient in need
thereof a compound of formula I and one or more additional
therapeutic agents selected from Singulair.RTM., beta-2 agonists
such as albuterol (Ventolin.RTM. HFA, Proventil.RTM. HFA),
levalbuterol (Xopenex.RTM.), metaproterenol (Alupent.RTM.),
pirbuterol acetate (Maxair.RTM.), terbutaline sulfate
(Brethaire.RTM.), salmeterol xinafoate (Serevent.RTM.) and
formoterol (Foradil.RTM.), anticholinergic agents such as
ipratropium bromide (Atrovent.RTM.) and tiotropium (Spiriva.RTM.),
inhaled corticosteroids such as prednisone, prednisolone,
beclomethasone dipropionate (Beclovent.RTM., Qvar.RTM., and
Vanceril.RTM.), triamcinolone acetonide (Azmacort.RTM.), mometasone
(Asthmanex.RTM.), budesonide (Pulmocort.RTM.), flunisolide
(Aerobid.RTM.), Afviar.RTM., Symbicort.RTM., and Dulera.RTM.,
cromolyn sodium (Intal.RTM.), methylxanthines such as theophylline
(Theo-Dur.RTM., Theolair.RTM., Slo-bid.RTM., Uniphyl.RTM.,
Theo-24.RTM.) and aminophylline, and IgE antibodies such as
omalizumab (Xolair.RTM.).
[0274] In some embodiments, the present invention provides a method
of treating COPD comprising administering to a patient in need
thereof a compound of formula I and one or more additional
therapeutic agents selected from beta-2 agonists such as albuterol
(Ventolin.RTM. HFA, Proventil.RTM. HFA), levalbuterol
(Xopenex.RTM.), metaproterenol (Alupent.RTM.), pirbuterol acetate
(Maxair.RTM.), terbutaline sulfate (Brethaire.RTM.), salmeterol
xinafoate (Serevent.RTM.) and formoterol (Foradil.RTM.),
anticholinergic agents such as ipratropium bromide (Atrovent.RTM.)
and tiotropium (Spiriva.RTM.), methylxanthines such as theophylline
(Theo-Dur.RTM., Theolair.RTM., Slo-bid.RTM., Uniphyl.RTM.,
Theo-24.RTM.) and aminophylline, inhaled corticosteroids such as
prednisone, prednisolone, beclomethasone dipropionate
(Beclovent.RTM., Qvar.RTM., and Vanceril.RTM.), triamcinolone
acetonide (Azmacort.RTM.), mometasone (Asthmanex.RTM.), budesonide
(Pulmocort.RTM.), flunisolide (Aerobid.RTM.), Afviar.RTM.,
Symbicort.RTM., and Dulera.RTM.,
[0275] In another embodiment, the present invention provides a
method of treating a hematological malignancy comprising
administering to a patient in need thereof a compound of formula I
and one or more additional therapeutic agents selected from
rituximab (Rituxan.RTM.), cyclophosphamide (Cytoxan.RTM.),
doxorubicin (Hydrodaunorubicin.RTM.), vincristine (Oncovin.RTM.),
prednisone, a hedgehog signaling inhibitor, a BTK inhibitor, a
JAK/pan-JAK inhibitor, a PI3K inhibitor, a SYK inhibitor, and
combinations thereof.
[0276] In another embodiment, the present invention provides a
method of treating a solid tumor comprising administering to a
patient in need thereof a compound of formula I and one or more
additional therapeutic agents selected from rituximab
(Rituxan.RTM.), cyclophosphamide (Cytoxan.RTM.), doxorubicin
(Hydrodaunorubicin.RTM.), vincristine (Oncovin.RTM.), prednisone, a
hedgehog signaling inhibitor, a BTK inhibitor, a JAK/pan-JAK
inhibitor, a PI3K inhibitor, a SYK inhibitor, and combinations
thereof.
[0277] In another embodiment, the present invention provides a
method of treating a hematological malignancy comprising
administering to a patient in need thereof a compound of formula I
and a Hedgehog (Hh) signaling pathway inhibitor. In some
embodiments, the hematological malignancy is DLBCL (Ramirez et al
"Defining causative factors contributing in the activation of
hedgehog signaling in diffuse large B-cell lymphoma" Leuk. Res.
(2012), published online July 17, and incorporated herein by
reference in its entirety).
[0278] In another embodiment, the present invention provides a
method of treating diffuse large B-cell lymphoma (DLBCL) comprising
administering to a patient in need thereof a compound of formula I
and one or more additional therapeutic agents selected from
rituximab (Rituxan.RTM.), cyclophosphamide (Cytoxan.RTM.),
doxorubicin (Hydrodaunorubicin.RTM.), vincristine (Oncovin.RTM.),
prednisone, a hedgehog signaling inhibitor, and combinations
thereof.
[0279] In another embodiment, the present invention provides a
method of treating multiple myeloma comprising administering to a
patient in need thereof a compound of formula I and one or more
additional therapeutic agents selected from bortezomib
(Velcade.RTM.), and dexamethasone (Decadron.RTM.), a hedgehog
signaling inhibitor, a BTK inhibitor, a JAK/pan-JAK inhibitor, a
TYK2 inhibitor, a PI3K inhibitor, a SYK inhibitor in combination
with lenalidomide (Revlimid.RTM.).
[0280] In another embodiment, the present invention provides a
method of treating or lessening the severity of a disease
comprising administering to a patient in need thereof a compound of
formula I and a BTK inhibitor, wherein the disease is selected from
inflammatory bowel disease, arthritis, systemic lupus erythematosus
(SLE), vasculitis, idiopathic thrombocytopenic purpura (ITP),
rheumatoid arthritis, psoriatic arthritis, osteoarthritis, Still's
disease, juvenile arthritis, diabetes, myasthenia gravis,
Hashimoto's thyroiditis, Ord's thyroiditis, Graves' disease,
autoimmune thyroiditis, Sjogren's syndrome, multiple sclerosis,
systemic sclerosis, Lyme neuroborreliosis, Guillain-Barre syndrome,
acute disseminated encephalomyelitis, Addison's disease,
opsoclonus-myoclonus syndrome, ankylosing spondylosis,
antiphospholipid antibody syndrome, aplastic anemia, autoimmune
hepatitis, autoimmune gastritis, pernicious anemia, celiac disease,
Goodpasture's syndrome, idiopathic thrombocytopenic purpura, optic
neuritis, scleroderma, primary biliary cirrhosis, Reiter's
syndrome, Takayasu's arteritis, temporal arteritis, warm autoimmune
hemolytic anemia, Wegener's granulomatosis, psoriasis, alopecia
universalis, Behcet's disease, chronic fatigue, dysautonomia,
membranous glomerulonephropathy, endometriosis, interstitial
cystitis, pemphigus vulgaris, bullous pemphigoid, neuromyotonia,
scleroderma, vulvodynia, a hyperproliferative disease, rejection of
transplanted organs or tissues, Acquired Immunodeficiency Syndrome
(AIDS, also known as HIV), type 1 diabetes, graft versus host
disease, transplantation, transfusion, anaphylaxis, allergies
(e.g., allergies to plant pollens, latex, drugs, foods, insect
poisons, animal hair, animal dander, dust mites, or cockroach
calyx), type I hypersensitivity, allergic conjunctivitis, allergic
rhinitis, and atopic dermatitis, asthma, appendicitis, atopic
dermatitis, asthma, allergy, blepharitis, bronchiolitis,
bronchitis, bursitis, cervicitis, cholangitis, cholecystitis,
chronic graft rejection, colitis, conjunctivitis, Crohn's disease,
cystitis, dacryoadenitis, dermatitis, dermatomyositis,
encephalitis, endocarditis, endometritis, enteritis, enterocolitis,
epicondylitis, epididymitis, fasciitis, fibrositis, gastritis,
gastroenteritis, Henoch-Schonlein purpura, hepatitis, hidradenitis
suppurativa, immunoglobulin A nephropathy, interstitial lung
disease, laryngitis, mastitis, meningitis, myelitis myocarditis,
myositis, nephritis, oophoritis, orchitis, osteitis, otitis,
pancreatitis, parotitis, pericarditis, peritonitis, pharyngitis,
pleuritis, phlebitis, pneumonitis, pneumonia, polymyositis,
proctitis, prostatitis, pyelonephritis, rhinitis, salpingitis,
sinusitis, stomatitis, synovitis, tendonitis, tonsillitis,
ulcerative colitis, uveitis, vaginitis, vasculitis, or vulvitis,
B-cell proliferative disorder, e.g., diffuse large B cell lymphoma,
follicular lymphoma, chronic lymphocytic lymphoma, chronic
lymphocytic leukemia, acute lymphocytic leukemia, B-cell
prolymphocytic leukemia, lymphoplasmacytic lymphoma/Waldenstrom
macroglobulinemia, splenic marginal zone lymphoma, multiple myeloma
(also known as plasma cell myeloma), non-Hodgkin's lymphoma,
Hodgkin's lymphoma, plasmacytoma, extranodal marginal zone B cell
lymphoma, nodal marginal zone B cell lymphoma, mantle cell
lymphoma, mediastinal (thymic) large B cell lymphoma, intravascular
large B cell lymphoma, primary effusion lymphoma, Burkitt
lymphoma/leukemia, or lymphomatoid granulomatosis, breast cancer,
prostate cancer, or cancer of the mast cells (e.g., mastocytoma,
mast cell leukemia, mast cell sarcoma, systemic mastocytosis), bone
cancer, colorectal cancer, pancreatic cancer, diseases of the bone
and joints including, without limitation, rheumatoid arthritis,
seronegative spondyloarthropathies (including ankylosing
spondylitis, psoriatic arthritis and Reiter's disease), Behcet's
disease, Sjogren's syndrome, systemic sclerosis, osteoporosis, bone
cancer, bone metastasis, a thromboembolic disorder, (e.g.,
myocardial infarct, angina pectoris, reocclusion after angioplasty,
restenosis after angioplasty, reocclusion after aortocoronary
bypass, restenosis after aortocoronary bypass, stroke, transitory
ischemia, a peripheral arterial occlusive disorder, pulmonary
embolism, deep venous thrombosis), inflammatory pelvic disease,
urethritis, skin sunburn, sinusitis, pneumonitis, encephalitis,
meningitis, myocarditis, nephritis, osteomyelitis, myositis,
hepatitis, gastritis, enteritis, dermatitis, gingivitis,
appendicitis, pancreatitis, cholocystitus, agammaglobulinemia,
psoriasis, allergy, Crohn's disease, irritable bowel syndrome,
ulcerative colitis, Sjogren's disease, tissue graft rejection,
hyperacute rejection of transplanted organs, asthma, allergic
rhinitis, chronic obstructive pulmonary disease (COPD), autoimmune
polyglandular disease (also known as autoimmune polyglandular
syndrome), autoimmune alopecia, pernicious anemia,
glomerulonephritis, dermatomyositis, multiple sclerosis,
scleroderma, vasculitis, autoimmune hemolytic and thrombocytopenic
states, Goodpasture's syndrome, atherosclerosis, Addison's disease,
Parkinson's disease, Alzheimer's disease, diabetes, septic shock,
systemic lupus erythematosus (SLE), rheumatoid arthritis, psoriatic
arthritis, juvenile arthritis, osteoarthritis, chronic idiopathic
thrombocytopenic purpura, Waldenstrom macroglobulinemia, myasthenia
gravis, Hashimoto's thyroiditis, atopic dermatitis, degenerative
joint disease, vitiligo, autoimmune hypopituitarism, Guillain-Barre
syndrome, Behcet's disease, scleraderma, mycosis fungoides, acute
inflammatory responses (such as acute respiratory distress syndrome
and ischemia/reperfusion injury), and Graves' disease.
[0281] In another embodiment, the present invention provides a
method of treating or lessening the severity of a disease
comprising administering to a patient in need thereof a compound of
formula I and a PBK inhibitor, wherein the disease is selected from
a cancer, a neurodegenative disorder, an angiogenic disorder, a
viral disease, an autoimmune disease, an inflammatory disorder, a
hormone-related disease, conditions associated with organ
transplantation, immunodeficiency disorders, a destructive bone
disorder, a proliferative disorder, an infectious disease, a
condition associated with ceil death, thrombin-induced platelet
aggregation, chronic myelogenous leukemia (CIVIL), chronic
lymphocytic leukemia (CLL), liver disease, pathologic immune
conditions involving T cell activation, a cardiovascular disorder,
and a CNS disorder.
[0282] In another embodiment, the present invention provides a
method of treating or lessening the severity of a disease
comprising administering to a patient in need thereof a compound of
formula I and a PBK inhibitor, wherein the disease is selected from
benign or malignant tumor, carcinoma or solid tumor of the brain,
kidney (e.g., renal cell carcinoma (RCC)), liver, adrenal gland,
bladder, breast, stomach, gastric tumors, ovaries, colon, rectum,
prostate, pancreas, lung, vagina, endometrium, cervix, testis,
genitourinary tract, esophagus, larynx, skin, bone or thyroid,
sarcoma, glioblastomas, neuroblastomas, multiple myeloma or
gastrointestinal cancer, especially colon carcinoma or colorectal
adenoma or a tumor of the neck and head, an epidermal
hyperproliferation, psoriasis, prostate hyperplasia, a neoplasia, a
neoplasia of epithelial character, adenoma, adenocarcinoma,
keratoacanthoma, epidermoid carcinoma, large cell carcinoma,
non-small-cell lung carcinoma, lymphomas, (including, for example,
non-Hodgkin's Lymphoma (NHL) and Hodgkin's lymphoma (also termed
Hodgkin's or Hodgkin's disease)), a mammary carcinoma, follicular
carcinoma, undifferentiated carcinoma, papillary carcinoma,
seminoma, melanoma, or a leukemia, diseases include Cowden
syndrome, Lhermitte-Dudos disease and Bannayan-Zonana syndrome, or
diseases in which the PI3K/PKB pathway is aberrantly activated,
asthma of whatever type or genesis including both intrinsic
(non-allergic) asthma and extrinsic (allergic) asthma, mild asthma,
moderate asthma, severe asthma, bronchitic asthma, exercise-induced
asthma, occupational asthma and asthma induced following bacterial
infection, acute lung injury (ALI), adult/acute respiratory
distress syndrome (ARDS), chronic obstructive pulmonary, airways or
lung disease (COPD, COAD or COLD), including chronic bronchitis or
dyspnea associated therewith, emphysema, as well as exacerbation of
airways hyperreactivity consequent to other drug therapy, in
particular other inhaled drug therapy, bronchitis of whatever type
or genesis including, but not limited to, acute, arachidic,
catarrhal, croupus, chronic or phthinoid bronchitis, pneumoconiosis
(an inflammatory, commonly occupational, disease of the lungs,
frequently accompanied by airways obstruction, whether chronic or
acute, and occasioned by repeated inhalation of dusts) of whatever
type or genesis, including, for example, aluminosis, anthracosis,
asbestosis, chalicosis, ptilosis, siderosis, silicosis, tabacosis
and byssinosis, Loffler's syndrome, eosinophilic, pneumonia,
parasitic (in particular metazoan) infestation (including tropical
eosinophilia), bronchopulmonary aspergillosis, polyarteritis nodosa
(including Churg-Strauss syndrome), eosinophilic granuloma and
eosinophil-related disorders affecting the airways occasioned by
drug-reaction, psoriasis, contact dermatitis, atopic dermatitis,
alopecia areata, erythema multiforma, dermatitis herpetiformis,
scleroderma, vitiligo, hypersensitivity angiitis, urticaria,
bullous pemphigoid, lupus erythematosus, pemphisus, epidermolysis
bullosa acquisita, conjunctivitis, keratoconjunctivitis sicca, and
vernal conjunctivitis, diseases affecting the nose including
allergic rhinitis, and inflammatory disease in which autoimmune
reactions are implicated or having an autoimmune component or
etiology, including autoimmune hematological disorders (e.g.
hemolytic anemia, aplastic anemia, pure red cell anemia and
idiopathic thrombocytopenia), systemic lupus erythematosus,
rheumatoid arthritis, polychondritis, sclerodoma, Wegener
granulamatosis, dermatomyositis, chronic active hepatitis,
myasthenia gravis, Steven-Johnson syndrome, idiopathic sprue,
autoimmune inflammatory bowel disease (e.g. ulcerative colitis and
Crohn's disease), endocrine opthalmopathy, Grave's disease,
sarcoidosis, alveolitis, chronic hypersensitivity pneumonitis,
multiple sclerosis, primary biliary cirrhosis, uveitis (anterior
and posterior), keratoconjunctivitis sicca and vernal
keratoconjunctivitis, interstitial lung fibrosis, psoriatic
arthritis and glomerulonephritis (with and without nephrotic
syndrome, e.g. including idiopathic nephrotic syndrome or minal
change nephropathy, restenosis, cardiomegaly, atherosclerosis,
myocardial infarction, ischemic stroke and congestive heart
failure, Alzheimer's disease, Parkinson's disease, amyotrophic
lateral sclerosis, Huntington's disease, and cerebral ischemia, and
neurodegenerative disease caused by traumatic injury, glutamate
neurotoxicity and hypoxia.
[0283] In some embodiments the present invention provides a method
of treating or lessening the severity of a disease comprising
administering to a patient in need thereof a compound of formula I
and a Bel-2 inhibitor, wherein the disease is an inflammatory
disorder, an autoimmune disorder, a proliferative disorder, an
endocrine disorder, a neurological disorder, or a disorder
associated with transplantation. In some embodiments, the disorder
is a proliferative disorder, lupus, or lupus nephritis. In some
embodiments, the proliferative disorder is chronic lymphocytic
leukemia, diffuse large B-cell lymphoma, Hodgkin's disease,
small-cell lung cancer, non-small-cell lung cancer, myelodysplastic
syndrome, lymphoma, a hematological neoplasm, or solid tumor.
[0284] The compounds and compositions, according to the method of
the present invention, may be administered using any amount and any
route of administration effective for treating or lessening the
severity of an autoimmune disorder, an inflammatory disorder, a
proliferative disorder, an endocrine disorder, a neurological
disorder, or a disorder associated with transplantation. The exact
amount required will vary from subject to subject, depending on the
species, age, and general condition of the subject, the severity of
the infection, the particular agent, its mode of administration,
and the like. Compounds of the invention are preferably formulated
in dosage unit form for ease of administration and uniformity of
dosage. The expression "dosage unit form" as used herein refers to
a physically discrete unit of agent appropriate for the patient to
be treated. It will be understood, however, that the total daily
usage of the compounds and compositions of the present invention
will be decided by the attending physician within the scope of
sound medical judgment. The specific effective dose level for any
particular patient or organism will depend upon a variety of
factors including the disorder being treated and the severity of
the disorder; the activity of the specific compound employed; the
specific composition employed; the age, body weight, general
health, sex and diet of the patient; the time of administration,
route of administration, and rate of excretion of the specific
compound employed; the duration of the treatment; drugs used in
combination or coincidental with the specific compound employed,
and like factors well known in the medical arts. The term
"patient", as used herein, means an animal, preferably a mammal,
and most preferably a human.
[0285] Pharmaceutically acceptable compositions of this invention
can be administered to humans and other animals orally, rectally,
parenterally, intracisternally, intravaginally, intraperitoneally,
topically (as by powders, ointments, or drops), bucally, as an oral
or nasal spray, or the like, depending on the severity of the
infection being treated. In certain embodiments, the compounds of
the invention may be administered orally or parenterally at dosage
levels of about 0.01 mg/kg to about 50 mg/kg and preferably from
about 1 mg/kg to about 25 mg/kg, of subject body weight per day,
one or more times a day, to obtain the desired therapeutic
effect.
[0286] Liquid dosage forms for oral administration include, but are
not limited to, pharmaceutically acceptable emulsions,
microemulsions, solutions, suspensions, syrups and elixirs. In
addition to the active compounds, the liquid dosage forms may
contain inert diluents commonly used in the art such as, for
example, water or other solvents, solubilizing agents and
emulsifiers such as ethyl alcohol, isopropyl alcohol, ethyl
carbonate, ethyl acetate, benzyl alcohol, benzyl benzoate,
propylene glycol, 1,3-butylene glycol, dimethylformamide, oils (in
particular, cottonseed, groundnut, corn, germ, olive, castor, and
sesame oils), glycerol, tetrahydrofurfuryl alcohol, polyethylene
glycols and fatty acid esters of sorbitan, and mixtures thereof.
Besides inert diluents, the oral compositions can also include
adjuvants such as wetting agents, emulsifying and suspending
agents, sweetening, flavoring, and perfuming agents.
[0287] Injectable preparations, for example, sterile injectable
aqueous or oleaginous suspensions may be formulated according to
the known art using suitable dispersing or wetting agents and
suspending agents. The sterile injectable preparation may also be a
sterile injectable solution, suspension or emulsion in a nontoxic
parenterally acceptable diluent or solvent, for example, as a
solution in 1,3-butanediol. Among the acceptable vehicles and
solvents that may be employed are water, Ringer's solution, U.S.P.
and isotonic sodium chloride solution. In addition, sterile, fixed
oils are conventionally employed as a solvent or suspending medium.
For this purpose any bland fixed oil can be employed including
synthetic mono- or diglycerides. In addition, fatty acids such as
oleic acid are used in the preparation of injectables.
[0288] Injectable formulations can be sterilized, for example, by
filtration through a bacterial-retaining filter, or by
incorporating sterilizing agents in the form of sterile solid
compositions which can be dissolved or dispersed in sterile water
or other sterile injectable medium prior to use.
[0289] In order to prolong the effect of a compound of the present
invention, it is often desirable to slow the absorption of the
compound from subcutaneous or intramuscular injection. This may be
accomplished by the use of a liquid suspension of crystalline or
amorphous material with poor water solubility. The rate of
absorption of the compound then depends upon its rate of
dissolution that, in turn, may depend upon crystal size and
crystalline form. Alternatively, delayed absorption of a
parenterally administered compound form is accomplished by
dissolving or suspending the compound in an oil vehicle. Injectable
depot forms are made by forming microencapsule matrices of the
compound in biodegradable polymers such as
polylactide-polyglycolide. Depending upon the ratio of compound to
polymer and the nature of the particular polymer employed, the rate
of compound release can be controlled. Examples of other
biodegradable polymers include poly(orthoesters) and
poly(anhydrides). Depot injectable formulations are also prepared
by entrapping the compound in liposomes or microemulsions that are
compatible with body tissues.
[0290] Compositions for rectal or vaginal administration are
preferably suppositories which can be prepared by mixing the
compounds of this invention with suitable non-irritating excipients
or carriers such as cocoa butter, polyethylene glycol or a
suppository wax which are solid at ambient temperature but liquid
at body temperature and therefore melt in the rectum or vaginal
cavity and release the active compound.
[0291] Solid dosage forms for oral administration include capsules,
tablets, pills, powders, and granules. In such solid dosage forms,
the active compound is mixed with at least one inert,
pharmaceutically acceptable excipient or carrier such as sodium
citrate or dicalcium phosphate and/or a) fillers or extenders such
as starches, lactose, sucrose, glucose, mannitol, and silicic acid,
b) binders such as, for example, carboxymethylcellulose, alginates,
gelatin, polyvinylpyrrolidinone, sucrose, and acacia, c) humectants
such as glycerol, d) disintegrating agents such as agar-agar,
calcium carbonate, potato or tapioca starch, alginic acid, certain
silicates, and sodium carbonate, e) solution retarding agents such
as paraffin, f) absorption accelerators such as quaternary ammonium
compounds, g) wetting agents such as, for example, cetyl alcohol
and glycerol monostearate, h) absorbents such as kaolin and
bentonite clay, and i) lubricants such as talc, calcium stearate,
magnesium stearate, solid polyethylene glycols, sodium lauryl
sulfate, and mixtures thereof. In the case of capsules, tablets and
pills, the dosage form may also comprise buffering agents.
[0292] Solid compositions of a similar type may also be employed as
fillers in soft and hard-filled gelatin capsules using such
excipients as lactose or milk sugar as well as high molecular
weight polyethylene glycols and the like. The solid dosage forms of
tablets, dragees, capsules, pills, and granules can be prepared
with coatings and shells such as enteric coatings and other
coatings well known in the pharmaceutical formulating art. They may
optionally contain opacifying agents and can also be of a
composition that they release the active ingredient(s) only, or
preferentially, in a certain part of the intestinal tract,
optionally, in a delayed manner. Examples of embedding compositions
that can be used include polymeric substances and waxes. Solid
compositions of a similar type may also be employed as fillers in
soft and hard-filled gelatin capsules using such excipients as
lactose or milk sugar as well as high molecular weight polethylene
glycols and the like.
[0293] The active compounds can also be in micro-encapsulated form
with one or more excipients as noted above. The solid dosage forms
of tablets, dragees, capsules, pills, and granules can be prepared
with coatings and shells such as enteric coatings, release
controlling coatings and other coatings well known in the
pharmaceutical formulating art. In such solid dosage forms the
active compound may be admixed with at least one inert diluent such
as sucrose, lactose or starch. Such dosage forms may also comprise,
as is normal practice, additional substances other than inert
diluents, e.g., tableting lubricants and other tableting aids such
a magnesium stearate and microcrystalline cellulose. In the case of
capsules, tablets and pills, the dosage forms may also comprise
buffering agents. They may optionally contain opacifying agents and
can also be of a composition that they release the active
ingredient(s) only, or preferentially, in a certain part of the
intestinal tract, optionally, in a delayed manner. Examples of
embedding compositions that can be used include polymeric
substances and waxes.
[0294] Dosage forms for topical or transdermal administration of a
compound of this invention include ointments, pastes, creams,
lotions, gels, powders, solutions, sprays, inhalants or patches.
The active component is admixed under sterile conditions with a
pharmaceutically acceptable carrier and any needed preservatives or
buffers as may be required. Ophthalmic formulation, ear drops, and
eye drops are also contemplated as being within the scope of this
invention. Additionally, the present invention contemplates the use
of transdermal patches, which have the added advantage of providing
controlled delivery of a compound to the body. Such dosage forms
can be made by dissolving or dispensing the compound in the proper
medium. Absorption enhancers can also be used to increase the flux
of the compound across the skin. The rate can be controlled by
either providing a rate controlling membrane or by dispersing the
compound in a polymer matrix or gel.
[0295] According to one embodiment, the invention relates to a
method of inhibiting protein kinase activity in a biological sample
comprising the step of contacting said biological sample with a
compound of this invention, or a composition comprising said
compound.
[0296] According to another embodiment, the invention relates to a
method of inhibiting TYK2, or a mutant thereof, activity in a
biological sample comprising the step of contacting said biological
sample with a compound of this invention, or a composition
comprising said compound. In certain embodiments, the invention
relates to a method of irreversibly inhibiting TYK2, or a mutant
thereof, activity in a biological sample comprising the step of
contacting said biological sample with a compound of this
invention, or a composition comprising said compound.
[0297] In another embodiment, the invention provides a method of
selectively inhibiting TYK2 over one or more of JAK1, JAK2, and
JAK3. In some embodiments, a compound of the present invention is
more than 2-fold selective over JAK1/2/3. In some embodiments, a
compound of the present invention is more than 5-fold selective
over JAK1/2/3. In some embodiments, a compound of the present
invention is more than 10-fold selective over JAK1/2/3. In some
embodiments, a compound of the present invention is more than
50-fold selective over JAK1/2/3. In some embodiments, a compound of
the present invention is more than 100-fold selective over
JAK1/2/3.
[0298] The term "biological sample", as used herein, includes,
without limitation, cell cultures or extracts thereof; biopsied
material obtained from a mammal or extracts thereof; and blood,
saliva, urine, feces, semen, tears, or other body fluids or
extracts thereof.
[0299] Inhibition of TYK2 (or a mutant thereof) activity in a
biological sample is useful for a variety of purposes that are
known to one of skill in the art. Examples of such purposes
include, but are not limited to, blood transfusion,
organ-transplantation, biological specimen storage, and biological
assays.
[0300] Another embodiment of the present invention relates to a
method of inhibiting protein kinase activity in a patient
comprising the step of administering to said patient a compound of
the present invention, or a composition comprising said
compound.
[0301] According to another embodiment, the invention relates to a
method of inhibiting activity of TYK2, or a mutant thereof, in a
patient comprising the step of administering to said patient a
compound of the present invention, or a composition comprising said
compound. According to certain embodiments, the invention relates
to a method of reversibly or irreversibly inhibiting one or more of
TYK2, or a mutant thereof, activity in a patient comprising the
step of administering to said patient a compound of the present
invention, or a composition comprising said compound. In other
embodiments, the present invention provides a method for treating a
disorder mediated by TYK2, or a mutant thereof, in a patient in
need thereof, comprising the step of administering to said patient
a compound according to the present invention or pharmaceutically
acceptable composition thereof. Such disorders are described in
detail herein.
[0302] Depending upon the particular condition, or disease, to be
treated, additional therapeutic agents that are normally
administered to treat that condition, may also be present in the
compositions of this invention. As used herein, additional
therapeutic agents that are normally administered to treat a
particular disease, or condition, are known as "appropriate for the
disease, or condition, being treated."
[0303] A compound of the current invention may also be used to
advantage in combination with other therapeutic compounds. In some
embodiments, the other therapeutic compounds are antiproliferative
compounds. Such antiproliferative compounds include, but are not
limited to aromatase inhibitors; antiestrogens; topoisomerase I
inhibitors; topoisomerase II inhibitors; microtubule active
compounds; alkylating compounds; histone deacetylase inhibitors;
compounds which induce cell differentiation processes;
cyclooxygenase inhibitors; MMP inhibitors; mTOR inhibitors;
antineoplastic antimetabolites; platin compounds; compounds
targeting/decreasing a protein or lipid kinase activity and further
anti-angiogenic compounds; compounds which target, decrease or
inhibit the activity of a protein or lipid phosphatase; gonadorelin
agonists; anti-androgens; methionine aminopeptidase inhibitors;
matrix metalloproteinase inhibitors; bisphosphonates; biological
response modifiers; antiproliferative antibodies; heparanase
inhibitors; inhibitors of Ras oncogenic isoforms; telomerase
inhibitors; proteasome inhibitors; compounds used in the treatment
of hematologic malignancies; compounds which target, decrease or
inhibit the activity of Flt-3; Hsp90 inhibitors such as 17-AAG
(17-allylaminogeldanamycin, NSC330507), 17-DMAG
(17-dimethylaminoethylamino-17-demethoxy-geldanamycin, NSC707545),
IPI-504, CNF1010, CNF2024, CNF1010 from Conforma Therapeutics;
temozolomide (Temodal.RTM.); kinesin spindle protein inhibitors,
such as SB715992 or SB743921 from GlaxoSmithKline, or
pentamidine/chlorpromazine from CombinatoRx; MEK inhibitors such as
ARRY142886 from Array BioPharma, AZD6244 from AstraZeneca, PD181461
from Pfizer and leucovorin. The term "aromatase inhibitor" as used
herein relates to a compound which inhibits estrogen production,
for instance, the conversion of the substrates androstenedione and
testosterone to estrone and estradiol, respectively. The term
includes, but is not limited to steroids, especially atamestane,
exemestane and formestane and, in particular, non-steroids,
especially aminoglutethimide, roglethimide, pyridoglutethimide,
trilostane, testolactone, ketokonazole, vorozole, fadrozole,
anastrozole and letrozole. Exemestane is marketed under the trade
name Aromasin.TM.. Formestane is marketed under the trade name
Lentaron.TM.. Fadrozole is marketed under the trade name Afema.TM..
Anastrozole is marketed under the trade name Arimidex.TM..
Letrozole is marketed under the trade names Femara.TM. or
Femar.TM.. Aminoglutethimide is marketed under the trade name
Orimeten.TM.. A combination of the invention comprising a
chemotherapeutic agent which is an aromatase inhibitor is
particularly useful for the treatment of hormone receptor positive
tumors, such as breast tumors.
[0304] The term "antiestrogen" as used herein relates to a compound
which antagonizes the effect of estrogens at the estrogen receptor
level. The term includes, but is not limited to tamoxifen,
fulvestrant, raloxifene and raloxifene hydrochloride. Tamoxifen is
marketed under the trade name Nolvadex.TM.. Raloxifene
hydrochloride is marketed under the trade name Evista.TM..
Fulvestrant can be administered under the trade name Faslodex.TM..
A combination of the invention comprising a chemotherapeutic agent
which is an antiestrogen is particularly useful for the treatment
of estrogen receptor positive tumors, such as breast tumors.
[0305] The term "anti-androgen" as used herein relates to any
substance which is capable of inhibiting the biological effects of
androgenic hormones and includes, but is not limited to,
bicalutamide (Casodex.TM.). The term "gonadorelin agonist" as used
herein includes, but is not limited to abarelix, goserelin and
goserelin acetate. Goserelin can be administered under the trade
name Zoladex.TM..
[0306] The term "topoisomerase I inhibitor" as used herein
includes, but is not limited to topotecan, gimatecan, irinotecan,
camptothecian and its analogues, 9-nitrocamptothecin and the
macromolecular camptothecin conjugate PNU-166148. Irinotecan can be
administered, e.g. in the form as it is marketed, e.g. under the
trademark Camptosar.TM.. Topotecan is marketed under the trade name
Hycamptin.TM..
[0307] The term "topoisomerase II inhibitor" as used herein
includes, but is not limited to the anthracyclines such as
doxorubicin (including liposomal formulation, such as Caelyx.TM.),
daunorubicin, epirubicin, idarubicin and nemorubicin, the
anthraquinones mitoxantrone and losoxantrone, and the
podophillotoxines etoposide and teniposide. Etoposide is marketed
under the trade name Etopophos.TM.. Teniposide is marketed under
the trade name VM 26-Bristol Doxorubicin is marketed under the
trade name Acriblastin.TM. or Adriamycin.TM.. Epirubicin is
marketed under the trade name Farmorubicin.TM.. Idarubicin is
marketed, under the trade name Zavedos.TM.. Mitoxantrone is
marketed under the trade name Novantron.
[0308] The term "microtubule active agent" relates to microtubule
stabilizing, microtubule destabilizing compounds and microtublin
polymerization inhibitors including, but not limited to taxanes,
such as paclitaxel and docetaxel; vinca alkaloids, such as
vinblastine or vinblastine sulfate, vincristine or vincristine
sulfate, and vinorelbine; discodermolides; cochicine and
epothilones and derivatives thereof. Paclitaxel is marketed under
the trade name Taxol.TM.. Docetaxel is marketed under the trade
name Taxotere.TM.. Vinblastine sulfate is marketed under the trade
name Vinblastin R.P.TM.. Vincristine sulfate is marketed under the
trade name Farmistin.TM..
[0309] The term "alkylating agent" as used herein includes, but is
not limited to, cyclophosphamide, ifosfamide, melphalan or
nitrosourea (BCNU or Gliadel). Cyclophosphamide is marketed under
the trade name Cyclostin.TM.. Ifosfamide is marketed under the
trade name Holoxan.TM..
[0310] The term "histone deacetylase inhibitors" or "HDAC
inhibitors" relates to compounds which inhibit the histone
deacetylase and which possess antiproliferative activity. This
includes, but is not limited to, suberoylanilide hydroxamic acid
(SAHA).
[0311] The term "antineoplastic antimetabolite" includes, but is
not limited to, 5-fluorouracil or 5-FU, capecitabine, gemcitabine,
DNA demethylating compounds, such as 5-azacytidine and decitabine,
methotrexate and edatrexate, and folic acid antagonists such as
pemetrexed. Capecitabine is marketed under the trade name
Xeloda.TM.. Gemcitabine is marketed under the trade name
Gemzar.TM..
[0312] The term "platin compound" as used herein includes, but is
not limited to, carboplatin, cis-platin, cisplatinum and
oxaliplatin. Carboplatin can be administered, e.g., in the form as
it is marketed, e.g. under the trademark Carboplat.TM.. Oxaliplatin
can be administered, e.g., in the form as it is marketed, e.g.
under the trademark Eloxatin.TM..
[0313] The term "compounds targeting/decreasing a protein or lipid
kinase activity; or a protein or lipid phosphatase activity; or
further anti-angiogenic compounds" as used herein includes, but is
not limited to, protein tyrosine kinase and/or serine and/or
threonine kinase inhibitors or lipid kinase inhibitors, such as a)
compounds targeting, decreasing or inhibiting the activity of the
platelet-derived growth factor-receptors (PDGFR), such as compounds
which target, decrease or inhibit the activity of PDGFR, especially
compounds which inhibit the PDGF receptor, such as an
N-phenyl-2-pyrimidine-amine derivative, such as imatinib, SU101,
SU6668 and GFB-111; b) compounds targeting, decreasing or
inhibiting the activity of the fibroblast growth factor-receptors
(FGFR); c) compounds targeting, decreasing or inhibiting the
activity of the insulin-like growth factor receptor I (IGF-IR),
such as compounds which target, decrease or inhibit the activity of
IGF-IR, especially compounds which inhibit the kinase activity of
IGF-I receptor, or antibodies that target the extracellular domain
of IGF-I receptor or its growth factors; d) compounds targeting,
decreasing or inhibiting the activity of the Trk receptor tyrosine
kinase family, or ephrin B4 inhibitors; e) compounds targeting,
decreasing or inhibiting the activity of the Axl receptor tyrosine
kinase family; f) compounds targeting, decreasing or inhibiting the
activity of the Ret receptor tyrosine kinase; g) compounds
targeting, decreasing or inhibiting the activity of the Kit/SCFR
receptor tyrosine kinase, such as imatinib; h) compounds targeting,
decreasing or inhibiting the activity of the C-kit receptor
tyrosine kinases, which are part of the PDGFR family, such as
compounds which target, decrease or inhibit the activity of the
c-Kit receptor tyrosine kinase family, especially compounds which
inhibit the c-Kit receptor, such as imatinib; i) compounds
targeting, decreasing or inhibiting the activity of members of the
c-Abl family, their gene-fusion products (e.g. BCR-Abl kinase) and
mutants, such as compounds which target decrease or inhibit the
activity of c-Abl family members and their gene fusion products,
such as an N-phenyl-2-pyrimidine-amine derivative, such as imatinib
or nilotinib (AMN107); PD180970; AG957; NSC 680410; PD173955 from
ParkeDavis; or dasatinib (BMS-354825); j) compounds targeting,
decreasing or inhibiting the activity of members of the protein
kinase C (PKC) and Raf family of serine/threonine kinases, members
of the MEK, SRC, JAK/pan-JAK, FAR, PDK1, PKB/Akt, Ras/MAPK, PI3K,
SYK, BTK and TEC family, and/or members of the cyclin-dependent
kinase family (CDK) including staurosporine derivatives, such as
midostaurin; examples of further compounds include UCN-01,
safingol, BAY 43-9006, Bryostatin 1, Perifosine; Ilmofosine; RO
318220 and RO 320432; GO 6976; Isis 3521; LY333531/LY379196;
isochinoline compounds; FTIs; PD184352 or QAN697 (a P13K inhibitor)
or AT7519 (CDK inhibitor); k) compounds targeting, decreasing or
inhibiting the activity of protein-tyrosine kinase inhibitors, such
as compounds which target, decrease or inhibit the activity of
protein-tyrosine kinase inhibitors include imatinib mesylate
(Gleevec.TM.) or tyrphostin such as Tyrphostin A23/RG-50810; AG 99;
Tyrphostin AG 213; Tyrphostin AG 1748; Tyrphostin AG 490;
Tyrphostin B44; Tyrphostin B44 (+) enantiomer; Tyrphostin AG 555;
AG 494; Tyrphostin AG 556, AG957 and adaphostin
(4-{[(2,5-dihydroxyphenyl)methyl]amino}-benzoic acid adamantyl
ester; NSC 680410, adaphostin); 1) compounds targeting, decreasing
or inhibiting the activity of the epidermal growth factor family of
receptor tyrosine kinases (EGFR.sub.1 ErbB2, ErbB3, ErbB4 as homo-
or heterodimers) and their mutants, such as compounds which target,
decrease or inhibit the activity of the epidermal growth factor
receptor family are especially compounds, proteins or antibodies
which inhibit members of the EGF receptor tyrosine kinase family,
such as EGF receptor, ErbB2, ErbB3 and ErbB4 or bind to EGF or EGF
related ligands, CP 358774, ZD 1839, ZM 105180; trastuzumab
(Herceptin.TM.), cetuximab (Erbitux.TM.), Iressa, Tarceva, OSI-774,
Cl-1033, EKB-569, GW-2016, E1.1, E2.4, E2.5, E6.2, E6.4, E2.11,
E6.3 or E7.6.3, and 7H-pyrrolo-[2,3-d]pyrimidine derivatives; m)
compounds targeting, decreasing or inhibiting the activity of the
c-Met receptor, such as compounds which target, decrease or inhibit
the activity of c-Met, especially compounds which inhibit the
kinase activity of c-Met receptor, or antibodies that target the
extracellular domain of c-Met or bind to HGF, n) compounds
targeting, decreasing or inhibiting the kinase activity of one or
more JAK family members (JAK1/JAK2/JAK3/TYK2 and/or pan-JAK),
including but not limited to PRT-062070, SB-1578, baricitinib,
pacritinib, momelotinib, VX-509, AZD-1480, TG-101348, tofacitinib,
and ruxolitinib; o) compounds targeting, decreasing or inhibiting
the kinase activity of PI3 kinase (PI3K) including but not limited
to ATU-027, SF-1126, DS-7423, PBI-05204, GSK-2126458, ZSTK-474,
buparlisib, pictrelisib, PF-4691502, BYL-719, dactolisib, XL-147,
XL-765, and idelalisib; and; and q) compounds targeting, decreasing
or inhibiting the signaling effects of hedgehog protein (Hh) or
smoothened receptor (SMO) pathways, including but not limited to
cyclopamine, vismodegib, itraconazole, erismodegib, and IPI-926
(saridegib).
[0314] The term "PI3K inhibitor" as used herein includes, but is
not limited to compounds having inhibitory activity against one or
more enzymes in the phosphatidylinositol-3-kinase family,
including, but not limited to PI3K.alpha., PI3K.gamma.,
PI3K.delta., PI3K.beta., PI3K-C2.alpha., PI3K-C2.beta.,
PI3K-C2.gamma., Vps34, p110-.alpha., p110-.beta., p110-.gamma.,
p110-.delta., p85-.alpha., p85-.beta., p55-.gamma., p150, p101, and
p87. Examples of PI3K inhibitors useful in this invention include
but are not limited to ATU-027, SF-1126, DS-7423, PBI-05204,
GSK-2126458, ZSTK-474, buparlisib, pictrelisib, PF-4691502,
BYL-719, dactolisib, XL-147, XL-765, and idelalisib.
[0315] The term "BTK inhibitor" as used herein includes, but is not
limited to compounds having inhibitory activity against Bruton's
Tyrosine Kinase (BTK), including, but not limited to AVL-292 and
ibrutinib.
[0316] The term "SYK inhibitor" as used herein includes, but is not
limited to compounds having inhibitory activity against spleen
tyrosine kinase (SYK), including but not limited to PRT-062070,
R-343, R-333, Excellair, PRT-062607, and fostamatinib.
[0317] The term "Bcl-2 inhibitor" as used herein includes, but is
not limited to compounds having inhibitory activity against B-cell
lymphoma 2 protein (Bcl-2), including but not limited to ABT-199,
ABT-731, ABT-737, apogossypol, Ascenta's pan-Bcl-2 inhibitors,
curcumin (and analogs thereof), dual Bcl-2/Bcl-xL inhibitors
(Infinity Pharmaceuticals/Novartis Pharmaceuticals), Genasense
(G3139), HA14-1 (and analogs thereof; see WO2008118802), navitoclax
(and analogs thereof, see U.S. Pat. No. 7,390,799), NH-1 (Shenayng
Pharmaceutical University), obatoclax (and analogs thereof, see
WO2004106328), S-001 (Gloria Pharmaceuticals), TW series compounds
(Univ. of Michigan), and venetoclax. In some embodiments the Bcl-2
inhibitor is a small molecule therapeutic. In some embodiments the
Bcl-2 inhibitor is a peptidomimetic.
[0318] Further examples of BTK inhibitory compounds, and conditions
treatable by such compounds in combination with compounds of this
invention can be found in WO2008039218 and WO2011090760, the
entirety of which are incorporated herein by reference.
[0319] Further examples of SYK inhibitory compounds, and conditions
treatable by such compounds in combination with compounds of this
invention can be found in WO2003063794, WO2005007623, and
WO2006078846, the entirety of which are incorporated herein by
reference.
[0320] Further examples of PI3K inhibitory compounds, and
conditions treatable by such compounds in combination with
compounds of this invention can be found in WO2004019973,
WO2004089925, WO2007016176, U.S. Pat. No. 8,138,347, WO2002088112,
WO2007084786, WO2007129161, WO2006122806, WO2005113554, and
WO2007044729 the entirety of which are incorporated herein by
reference.
[0321] Further examples of JAK inhibitory compounds, and conditions
treatable by such compounds in combination with compounds of this
invention can be found in WO2009114512, WO2008109943, WO2007053452,
WO2000142246, and WO2007070514, the entirety of which are
incorporated herein by reference.
[0322] Further anti-angiogenic compounds include compounds having
another mechanism for their activity, e.g. unrelated to protein or
lipid kinase inhibition e.g. thalidomide (Thalomid.TM.) and
TNP-470.
[0323] Examples of proteasome inhibitors useful for use in
combination with compounds of the invention include, but are not
limited to bortezomib, disulfiram, epigallocatechin-3-gallate
(EGCG), salinosporamide A, carfilzomib, ONX-0912, CEP-18770, and
MLN9708.
[0324] Compounds which target, decrease or inhibit the activity of
a protein or lipid phosphatase are e.g. inhibitors of phosphatase
1, phosphatase 2A, or CDC25, such as okadaic acid or a derivative
thereof.
[0325] Compounds which induce cell differentiation processes
include, but are not limited to, retinoic acid, .alpha.- .gamma.-
or .delta.-tocopherol or .alpha.- .gamma.- or
.delta.-tocotrienol.
[0326] The term cyclooxygenase inhibitor as used herein includes,
but is not limited to, Cox-2 inhibitors, 5-alkyl substituted
2-arylaminophenylacetic acid and derivatives, such as celecoxib
(Celebrex.TM.), rofecoxib (Vioxx.TM.), etoricoxib, valdecoxib or a
5-alkyl-2-arylaminophenylacetic acid, such as
5-methyl-2-(2'-chloro-6'-fluoroanilino)phenyl acetic acid,
lumiracoxib.
[0327] The term "bisphosphonates" as used herein includes, but is
not limited to, etridonic, clodronic, tiludronic, pamidronic,
alendronic, ibandronic, risedronic and zoledronic acid. Etridonic
acid is marketed under the trade name Didronel.TM.. Clodronic acid
is marketed under the trade name Bonefos.TM.. Tiludronic acid is
marketed under the trade name Skelid.TM.. Pamidronic acid is
marketed under the trade name Aredia.TM.. Alendronic acid is
marketed under the trade name Fosamax.TM.. Ibandronic acid is
marketed under the trade name Bondranat.TM.. Risedronic acid is
marketed under the trade name Actonel.TM.. Zoledronic acid is
marketed under the trade name Zometa.TM.. The term "mTOR
inhibitors" relates to compounds which inhibit the mammalian target
of rapamycin (mTOR) and which possess antiproliferative activity
such as sirolimus (Rapamune.RTM.), everolimus (Certican.TM.),
CCI-779 and ABT578.
[0328] The term "heparanase inhibitor" as used herein refers to
compounds which target, decrease or inhibit heparin sulfate
degradation. The term includes, but is not limited to, PI-88. The
term "biological response modifier" as used herein refers to a
lymphokine or interferons.
[0329] The term "inhibitor of Ras oncogenic isoforms", such as
H-Ras, K-Ras, or N-Ras, as used herein refers to compounds which
target, decrease or inhibit the oncogenic activity of Ras; for
example, a "famesyl transferase inhibitor" such as L-744832,
DK8G557 or R115777 (Zarnestra.TM.). The term "telomerase inhibitor"
as used herein refers to compounds which target, decrease or
inhibit the activity of telomerase. Compounds which target,
decrease or inhibit the activity of telomerase are especially
compounds which inhibit the telomerase receptor, such as
telomestatin.
[0330] The term "methionine aminopeptidase inhibitor" as used
herein refers to compounds which target, decrease or inhibit the
activity of methionine aminopeptidase. Compounds which target,
decrease or inhibit the activity of methionine aminopeptidase
include, but are not limited to, bengamide or a derivative
thereof.
[0331] The term "proteasome inhibitor" as used herein refers to
compounds which target, decrease or inhibit the activity of the
proteasome. Compounds which target, decrease or inhibit the
activity of the proteasome include, but are not limited to,
Bortezomib (Velcade.TM.) and MLN 341.
[0332] The term "matrix metalloproteinase inhibitor" or ("MMP"
inhibitor) as used herein includes, but is not limited to, collagen
peptidomimetic and nonpeptidomimetic inhibitors, tetracycline
derivatives, e.g. hydroxamate peptidomimetic inhibitor batimastat
and its orally bioavailable analogue marimastat (BB-2516),
prinomastat (AG3340), metastat (NSC 683551) BMS-279251, BAY
12-9566, TAA211, MMI270B or AAJ996.
[0333] The term "compounds used in the treatment of hematologic
malignancies" as used herein includes, but is not limited to,
FMS-like tyrosine kinase inhibitors, which are compounds targeting,
decreasing or inhibiting the activity of FMS-like tyrosine kinase
receptors (Flt-3R); interferon, 1-.beta.-D-arabinofuransylcytosine
(ara-c) and bisulfan; ALK inhibitors, which are compounds which
target, decrease or inhibit anaplastic lymphoma kinase, and Bcl-2
inhibitors.
[0334] Compounds which target, decrease or inhibit the activity of
FMS-like tyrosine kinase receptors (Flt-3R) are especially
compounds, proteins or antibodies which inhibit members of the
Flt-3R receptor kinase family, such as PKC412, midostaurin, a
staurosporine derivative, SU11248 and MLN518.
[0335] The term "HSP90 inhibitors" as used herein includes, but is
not limited to, compounds targeting, decreasing or inhibiting the
intrinsic ATPase activity of HSP90; degrading, targeting,
decreasing or inhibiting the HSP90 client proteins via the
ubiquitin proteosome pathway. Compounds targeting, decreasing or
inhibiting the intrinsic ATPase activity of HSP90 are especially
compounds, proteins or antibodies which inhibit the ATPase activity
of HSP90, such as 17-allylamino,17-demethoxygeldanamycin (17AAG), a
geldanamycin derivative; other geldanamycin related compounds;
radicicol and HDAC inhibitors.
[0336] The term "antiproliferative antibodies" as used herein
includes, but is not limited to, trastuzumab (Herceptin.TM.),
Trastuzumab-DM1, erbitux, bevacizumab (Avastin.TM.), rituximab
(Rituxan.RTM.), PRO64553 (anti-CD40) and 2C4 Antibody. By
antibodies is meant intact monoclonal antibodies, polyclonal
antibodies, multispecific antibodies formed from at least 2 intact
antibodies, and antibodies fragments so long as they exhibit the
desired biological activity.
[0337] For the treatment of acute myeloid leukemia (AML), compounds
of the current invention can be used in combination with standard
leukemia therapies, especially in combination with therapies used
for the treatment of AML. In particular, compounds of the current
invention can be administered in combination with, for example,
farnesyl transferase inhibitors and/or other drugs useful for the
treatment of AML, such as Daunorubicin, Adriamycin, Ara-C, VP-16,
Teniposide, Mitoxantrone, Idarubicin, Carboplatinum and PKC412. In
some embodiments, the present invention provides a method of
treating AML associated with an ITD and/or D835Y mutation,
comprising administering a compound of the present invention
together with a one or more FLT3 inhibitors. In some embodiments,
the FLT3 inhibitors are selected from quizartinib (AC220), a
staurosporine derivative (e.g. midostaurin or lestaurtinib),
sorafenib, tandutinib, LY-2401401, LS-104, EB-10, famitinib,
NOV-110302, NMS-P948, AST-487, G-749, SB-1317, S-209, SC-110219,
AKN-028, fedratinib, tozasertib, and sunitinib. In some
embodiments, the FLT3 inhibitors are selected from quizartinib,
midostaurin, lestaurtinib, sorafenib, and sunitinib.
[0338] Other anti-leukemic compounds include, for example, Ara-C, a
pyrimidine analog, which is the 2-alpha-hydroxy ribose
(arabinoside) derivative of deoxycytidine. Also included is the
purine analog of hypoxanthine, 6-mercaptopurine (6-MP) and
fludarabine phosphate. Compounds which target, decrease or inhibit
activity of histone deacetylase (HDAC) inhibitors such as sodium
butyrate and suberoylanilide hydroxamic acid (SAHA) inhibit the
activity of the enzymes known as histone deacetylases. Specific
HDAC inhibitors include MS275, SAHA, FK228 (formerly FR901228),
Trichostatin A and compounds disclosed in U.S. Pat. No. 6,552,065
including, but not limited to,
N-hydroxy-3-[4-[[[2-(2-methyl-1H-indol-3-yl)-ethyl]-amino]methyl]phenyl]--
2E-2-propenamide, or a pharmaceutically acceptable salt thereof and
N-hydroxy-3-[4-[(2hydroxyethyl){2-(1H-indol-3-yl)ethyl]-amino]methyl]phen-
yl]-2E-2-propenamide, or a pharmaceutically acceptable salt
thereof, especially the lactate salt. Somatostatin receptor
antagonists as used herein refer to compounds which target, treat
or inhibit the somatostatin receptor such as octreotide, and
SOM230. Tumor cell damaging approaches refer to approaches such as
ionizing radiation. The term "ionizing radiation" referred to above
and hereinafter means ionizing radiation that occurs as either
electromagnetic rays (such as X-rays and gamma rays) or particles
(such as alpha and beta particles). Ionizing radiation is provided
in, but not limited to, radiation therapy and is known in the art.
See Heilman, Principles of Radiation Therapy, Cancer, in Principles
and Practice of Oncology, Devita et al., Eds., 4.sup.th Edition,
Vol. 1, pp. 248-275 (1993).
[0339] Also included are EDG binders and ribonucleotide reductase
inhibitors. The term "EDG binders" as used herein refers to a class
of immunosuppressants that modulates lymphocyte recirculation, such
as FTY720. The term "ribonucleotide reductase inhibitors" refers to
pyrimidine or purine nucleoside analogs including, but not limited
to, fludarabine and/or cytosine arabinoside (ara-C), 6-thioguanine,
5-fluorouracil, cladribine, 6-mercaptopurine (especially in
combination with ara-C against ALL) and/or pentostatin.
Ribonucleotide reductase inhibitors are especially hydroxyurea or
2-hydroxy-1H-isoindole-1,3-dione derivatives.
[0340] Also included are in particular those compounds, proteins or
monoclonal antibodies of VEGF such as
1-(4-chloroanilino)-4-(4-pyridylmethyl)phthalazine or a
pharmaceutically acceptable salt thereof,
1-(4-chloroanilino)-4-(4-pyridylmethyl)phthalazine succinate;
Angiostatin.TM.; Endostatin.TM.; anthranilic acid amides; ZD4190;
ZD6474; SU5416; SU6668; bevacizumab; or anti-VEGF antibodies or
anti-VEGF receptor antibodies, such as rhuMAb and RHUFab, VEGF
aptamer such as Macugon; FLT-4 inhibitors, FLT-3 inhibitors,
VEGFR-2 IgGI antibody, Angiozyme (RPI4610) and Bevacizumab
(Avastin.TM.).
[0341] Photodynamic therapy as used herein refers to therapy which
uses certain chemicals known as photosensitizing compounds to treat
or prevent cancers. Examples of photodynamic therapy include
treatment with compounds, such as Visudyne.TM. and porfimer
sodium.
[0342] Angiostatic steroids as used herein refers to compounds
which block or inhibit angiogenesis, such as, e.g., anecortave,
triamcinolone, hydrocortisone, 11-.alpha.-epihydrocotisol,
cortexolone, 17.alpha.-hydroxyprogesterone, corticosterone,
desoxycorticosterone, testosterone, estrone and dexamethasone.
[0343] Implants containing corticosteroids refers to compounds,
such as fluocinolone and dexamethasone.
[0344] Other chemotherapeutic compounds include, but are not
limited to, plant alkaloids, hormonal compounds and antagonists;
biological response modifiers, preferably lymphokines or
interferons; antisense oligonucleotides or oligonucleotide
derivatives; shRNA or siRNA; or miscellaneous compounds or
compounds with other or unknown mechanism of action.
[0345] The compounds of the invention are also useful as
co-therapeutic compounds for use in combination with other drug
substances such as anti-inflammatory, bronchodilatory or
antihistamine drug substances, particularly in the treatment of
obstructive or inflammatory airways diseases such as those
mentioned hereinbefore, for example as potentiators of therapeutic
activity of such drugs or as a means of reducing required dosaging
or potential side effects of such drugs. A compound of the
invention may be mixed with the other drug substance in a fixed
pharmaceutical composition or it may be administered separately,
before, simultaneously with or after the other drug substance.
Accordingly the invention includes a combination of a compound of
the invention as hereinbefore described with an anti-inflammatory,
bronchodilatory, antihistamine or anti-tussive drug substance, said
compound of the invention and said drug substance being in the same
or different pharmaceutical composition.
[0346] Suitable anti-inflammatory drugs include steroids, in
particular glucocorticosteroids such as budesonide, beclamethasone
dipropionate, fluticasone propionate, ciclesonide or mometasone
furoate; non-steroidal glucocorticoid receptor agonists; LTB4
antagonists such LY293111, CGS025019C, CP-195543, SC-53228, BIIL
284, ONO 4057, SB 209247; LTD4 antagonists such as montelukast and
zafirlukast; PDE4 inhibitors such cilomilast (Ariflo.RTM.
GlaxoSmithKline), Roflumilast (Byk Gulden), V-11294A (Napp),
BAY19-8004 (Bayer), SCH-351591 (Schering-Plough), Arofylline
(Almirall Prodesfarma), PD189659/PD168787 (Parke-Davis), AWD-12-281
(Asta Medica), CDC-801 (Celgene), SelCID.TM. CC-10004 (Celgene),
VM554/UM565 (Vemalis), T-440 (Tanabe), KW-4490 (Kyowa Hakko Kogyo);
A2a agonists; A2b antagonists; and beta-2 adrenoceptor agonists
such as albuterol (salbutamol), metaproterenol, terbutaline,
salmeterol fenoterol, procaterol, and especially, formoterol and
pharmaceutically acceptable salts thereof. Suitable bronchodilatory
drugs include anticholinergic or antimuscarinic compounds, in
particular ipratropium bromide, oxitropium bromide, tiotropium
salts and CHF 4226 (Chiesi), and glycopyrrolate.
[0347] Suitable antihistamine drug substances include cetirizine
hydrochloride, acetaminophen, clemastine fumarate, promethazine,
loratidine, desloratidine, diphenhydramine and fexofenadine
hydrochloride, activastine, astemizole, azelastine, ebastine,
epinastine, mizolastine and tefenadine.
[0348] Other useful combinations of compounds of the invention with
anti-inflammatory drugs are those with antagonists of chemokine
receptors, e.g. CCR-1, CCR-2, CCR-3, CCR-4, CCR-5, CCR-6, CCR-7,
CCR-8, CCR-9 and CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5,
particularly CCR-5 antagonists such as Schering-Plough antagonists
SC-351125, SCH-55700 and SCH-D, and Takeda antagonists such as
N-[[4-[[[6,7-dihydro-2-(4-methylphenyl)-5H-benzo-cyclohepten-8-yl]carbony-
l]amino]phenyl]-methyl]tetrahydro-N,N-dimethyl-2H-pyran-4-aminium
chloride (TAK-770).
[0349] The structure of the active compounds identified by code
numbers, generic or trade names may be taken from the actual
edition of the standard compendium "The Merck Index" or from
databases, e.g. Patents International (e.g. IMS World
Publications).
[0350] A compound of the current invention may also be used in
combination with known therapeutic processes, for example, the
administration of hormones or radiation. In certain embodiments, a
provided compound is used as a radiosensitizer, especially for the
treatment of tumors which exhibit poor sensitivity to
radiotherapy.
[0351] A compound of the current invention can be administered
alone or in combination with one or more other therapeutic
compounds, possible combination therapy taking the form of fixed
combinations or the administration of a compound of the invention
and one or more other therapeutic compounds being staggered or
given independently of one another, or the combined administration
of fixed combinations and one or more other therapeutic compounds.
A compound of the current invention can besides or in addition be
administered especially for tumor therapy in combination with
chemotherapy, radiotherapy, immunotherapy, phototherapy, surgical
intervention, or a combination of these. Long-term therapy is
equally possible as is adjuvant therapy in the context of other
treatment strategies, as described above. Other possible treatments
are therapy to maintain the patient's status after tumor
regression, or even chemopreventive therapy, for example in
patients at risk.
[0352] Those additional agents may be administered separately from
an inventive compound-containing composition, as part of a multiple
dosage regimen. Alternatively, those agents may be part of a single
dosage form, mixed together with a compound of this invention in a
single composition. If administered as part of a multiple dosage
regime, the two active agents may be submitted simultaneously,
sequentially or within a period of time from one another normally
within five hours from one another.
[0353] As used herein, the term "combination," "combined," and
related terms refers to the simultaneous or sequential
administration of therapeutic agents in accordance with this
invention. For example, a compound of the present invention may be
administered with another therapeutic agent simultaneously or
sequentially in separate unit dosage forms or together in a single
unit dosage form. Accordingly, the present invention provides a
single unit dosage form comprising a compound of the current
invention, an additional therapeutic agent, and a pharmaceutically
acceptable carrier, adjuvant, or vehicle.
[0354] The amount of both an inventive compound and additional
therapeutic agent (in those compositions which comprise an
additional therapeutic agent as described above) that may be
combined with the carrier materials to produce a single dosage form
will vary depending upon the host treated and the particular mode
of administration. Preferably, compositions of this invention
should be formulated so that a dosage of between 0.01-100 mg/kg
body weight/day of an inventive compound can be administered.
[0355] In those compositions which comprise an additional
therapeutic agent, that additional therapeutic agent and the
compound of this invention may act synergistically. Therefore, the
amount of additional therapeutic agent in such compositions will be
less than that required in a monotherapy utilizing only that
therapeutic agent. In such compositions a dosage of between
0.01-1,000 .mu.g/kg body weight/day of the additional therapeutic
agent can be administered.
[0356] The amount of additional therapeutic agent present in the
compositions of this invention will be no more than the amount that
would normally be administered in a composition comprising that
therapeutic agent as the only active agent. Preferably the amount
of additional therapeutic agent in the presently disclosed
compositions will range from about 50% to 100% of the amount
normally present in a composition comprising that agent as the only
therapeutically active agent.
[0357] The compounds of this invention, or pharmaceutical
compositions thereof, may also be incorporated into compositions
for coating an implantable medical device, such as prostheses,
artificial valves, vascular grafts, stents and catheters. Vascular
stents, for example, have been used to overcome restenosis
(re-narrowing of the vessel wall after injury). However, patients
using stents or other implantable devices risk clot formation or
platelet activation. These unwanted effects may be prevented or
mitigated by pre-coating the device with a pharmaceutically
acceptable composition comprising a kinase inhibitor. Implantable
devices coated with a compound of this invention are another
embodiment of the present invention.
EXEMPLIFICATION
[0358] As depicted in the Examples below, in certain exemplary
embodiments, compounds are prepared according to the following
general procedures. It will be appreciated that, although the
general methods depict the synthesis of certain compounds of the
present invention, the following general methods, and other methods
known to one of ordinary skill in the art, can be applied to all
compounds and subclasses and species of each of these compounds, as
described herein.
Example 1. Synthesis of
2-(2,6-difluorophenyl)-4-(indolin-6-ylamino)-6,7-dihydro-5H-pyrrolo[3,4-d-
]pyrimidin-5-one, I-1
##STR00121##
[0360] Synthesis of compound 1.2 To a solution of compound 1.1 (300
mg 0.69 mmol, 1.0 eq.) in 1-butanol (9.0 mL) were added tert-butyl
6-aminoindoline-1-carboxylate (162 mg, 0.69 mmol, 1.0 eq.) and
DIPEA (224 mg, 1.74 mmol, 2.5 eq.) at room temperature. Reaction
mixture was heated at 85-90.degree. C. for 2 hours. After
completion of the reaction, mixture was poured into the water and
extracted using ethyl acetate. Organic layer was washed with by
brine solution, dried over sodium sulfate and concentrated under
reduced pressure. Crude was purified by column chromatography to
provide compound 1.1 (302 mg, 69.04%), MS (ES): m/z 630.6
[M+H].sup.+.
[0361] Synthesis of compound I-1. A solution of compound 1.1 (302
mg, 0.48 mmol, 1.0 eq.) in HBr/HOAc solution (33%, 6.0 mL) was
stirred at room temperature for 45 minutes. After completion of the
reaction, reaction mixture was poured into cold water, neutralized
with NaHCO.sub.3 and extracted with ethyl acetate (75 ml.times.2).
Solvent was removed under reduced pressure and the crude was
purified by column chromatography to afford pure compound I-1 (105
mg, 57.7%). MS (ES): m/z--380.3 [M+H].sup.+; .sup.1H NMR (400 MHz,
DMSO-d.sub.6): .delta. 8.88 (s, 1H), 8.85 (s, 1H), 7.61-7.57 (m,
1H), 7.28-7.24 (t, 2H), 6.97-6.93 (m, 2H), 6.81-6.79 (dd, 1H), 5.62
(s, 1H), 4.45 (s, 2H), 3.42-3.40 (t, 2H), 2.87-2.83 (t, 2H).
Example 2. Synthesis of
2-(2,6-difluorophenyl)-4-((3,3-dimethylindolin-6-yl)amino)-6,7-dihydro-5H-
-pyrrolo[3,4-d]pyrimidin-5-one, I-2
##STR00122##
[0363] Synthesis of compound 2.1. To a solution of compound 1.1
(130 mg 0.3 mmol, 1.0 eq.) in 1-butanol (5.0 mL) was added
tert-butyl 6-amino-3,3-dimethylindoline-1-carboxylate (79 mg, 0.3
mmol, 1.0 eq.) and diisopropylethylamine (97 mg, 0.75 mmol, 2.5
eq.) at room temperature. Reaction was heated at 85-90.degree. C.
for 2 hours. After completion of the reaction, reaction mixture was
poured into water and extracted using ethyl acetate. Organic layer
was washed with by brine solution, dried over sodium sulfate and
concentrated under reduced pressure. Crude was purified by column
chromatography to afford pure compound 2.1 (110 mg, 65.53%), MS
(ES): m/z 558.6 [M+H].sup.+.
[0364] Synthesis of compound I-2. A solution of compound 2.1 (110
mg, 0.19 mmol, 1.0 eq.) in hydrogen bromide/CH.sub.3COOH (33%, 4
ml) was stirred at room temperature for 45 minutes. After
completion of the reaction, mixture was poured into cold water,
neutralized with NaHCO.sub.3. Product was extracted with ethyl
acetate (75 mL.times.2). Solvent was removed under reduced pressure
at 45.degree. C. The crude was purified using column chromatography
and preparative TLC to afford pure compound I-2 (20 mg, 24.9%). MS
(ES): m/z--408.4 [M+H].sup.+; .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 8.88 (s, 1H), 8.85 (s, 1H), 7.62-7.57 (m, 1H), 7.28-7.24
(t, 2H), 6.94-6.92 (m, 2H), 5.60 (s, 1H), 4.45 (s, 2H), 3.167-3.163
(d, 2H), 1.23 (s, 6H).
Example 3. Synthesis of compound
2-(2,6-difluorophenyl)-4-((2,2-dimethylindolin-6-yl)amino)-6,7-dihydro-5H-
-pyrrolo[3,4-d]pyrimidin-5-one, I-3
##STR00123## ##STR00124##
[0366] Synthesis of compound 3.2. To a solution of compound 3.1 (1
g 4.60 mmol, 1.0 eq.) in cyclohexane (8 mL) were added ter.-butyl
2,2,2-trichloroacetimidate (2.05 ml, 11.51 mmol, 2.5 eq.),
BF.sub.3-Et.sub.2O (0.11 ml) at room temperature under argon
atmosphere for 15 minutes. Reaction mixture was stirred at room
temperature for 16 hours. After completion of reaction, mixture was
poured into water and extracted using ethyl acetate. Organic layer
was washed with by satd. NaHCO.sub.3, dried over Na.sub.2SO.sub.4
and concentrated under reduced pressure. The crude was purified
using column chromatography to provide compound 3.2 (0.27 g,
21.3%). MS (ES): No ionisation [M+H].sup.+.
[0367] Synthesis of compound 3.3. Compound 3.2 (0.2 g, 0.73 mmol)
was dissolved in methyl chloroformate (2 mL). The reaction mixture
was heated at 80.degree. C. for 16 hrs. After completion of the
reaction, water was added to the mixture and extracted using
dichloromethane. Organic layer was dried over sodium sulfate and
concentrated under reduced pressure. The crude reaction mixture was
purified by column chromatography to afford compound 3.3 (0.12 g,
49.49%). MS (ES): m/z No ionisation [M+H].sup.+.
[0368] Synthesis of compound 3.4. To a solution of compound 3.3
(0.050 g, 0.150 mmol. 1.0 eq.) in xylene were added cesium
carbonate (0.068 g, 0.211 mmol), tricyclohexylphosphine
tetrafluoroborate (0.004 g, 0.009 mmol, 0.06 eq.), pivalic acid
(0.005 g, 0.0452 mmol, 0.3 eq), and palladium acetate (0.001 g,
0.0045 mmol, 0.03 eq). Reaction mixture was degassed using argon
atmosphere for 10 min. The reaction was stirred at 140.degree. C.
for 1 hour. After completion of the reaction, mixture was poured in
water, and product was extracted with ethyl acetate (50
mL.times.2). Solvent was removed under reduced pressure at
45.degree. C. to get crude, which was purified by column
chromatography to afford pure compound 3.4 (0.035 g, 92.63%). MS
(ES): m/z 251 [M+H].sup.+.
[0369] Synthesis of compound 3.5. To a suspension of Pd/C (10 mg)
in methanol (10 ml) was added compound 3.4 (0.085 g, 0.339 mmol.
1.0 eq.) under nitrogen atmosphere. The mixture was purged with
H.sub.2 (gas) at room temperature for 2 hours. After completion of
the reaction, the mixture was filtered through celite. Solvent was
removed under reduced pressure at 45.degree. C. to afford compound
3.5 (0.070 g, 93.6%). MS (ES): m/z 221.3 [M+H].sup.+.
[0370] Synthesis of compound 3.6. To a solution of compound 3.5
(130 mg 0.301 mmol, 1.0 eq.) in 1-butanol (2.0 mL) was added
compound 3.5 (72 mg, 0.331 mmol, 1.1 eq.) and DIPEA (0.15 mL, 0.903
mmol, 3 eq.) at room temperature. Reaction was heated at 90.degree.
C. for 3 hours. After completion of the reaction, mixture was
poured into water and extracted using ethyl acetate. Organic layer
was washed with by brine solution. Organic layer was dried over
sodium sulfate and concentrated under reduced pressure. Crude was
purified by column chromatography to afford pure compound 3.6 (120
mg, 64.75%), MS (ES): m/z 616.7 [M+H].sup.+.
[0371] Synthesis of compound I-3. A solution of compound 3.6 (0.120
g, 0.194 mmol, 1.0 eq.) in HBr/HOAc (33%, 3 ml) was stirred at room
temperature for 45 minutes. After completion of the reaction, the
mixture was poured into cold water, neutralized with NaHCO.sub.3
and product was extracted with ethyl acetate (75 ml.times.2).
Solvent was removed under reduced pressure at 45.degree. C. to get
crude which was purified to afford pure compound I-3 (10 mg,
12.59%). MS (ES): m/z--408.3 [M+H].sup.+; .sup.1H NMR (400 MHz,
DMSO-d.sub.6): .delta. 8.87 (d, 2H), 7.59 (m, 1H), 7.25 (dd, 2H),
6.91 (d, 2H), 6.75 (dd, 1H), 5.64 (s, 1H), 4.45 (s, 2H), 2.67 (s,
2H), 1.20 (d, 6H).
Example 4. Synthesis of
4-((5-((1R,5S)-8-oxa-3-azabicyclo[3.2.1]octan-3-yl)pyridin-2-yl)amino)-2--
(2,6-difluorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-4
##STR00125##
[0373] Synthesis of compound 4.2. To a solution of 4.1 (0.2 g,
0.9852 mmol, 1.0 equiv) in DMSO (3 ml) were added TBAI (0.036 g,
0.0985 mmol, 0.1 equiv), (1R,5S)-8-oxa-3-zabicyclo[3.2.1]octane
(0.162 g, 1.083 mmol, 1.1 equiv.), and K.sub.2CO.sub.3 (0.544 g,
3.94 mmol, 4 equiv). Reaction mixture was heated at 120.degree. C.
for 2 hours. The reaction mixture was poured into water and product
was extracted with ethyl acetate. Organic layers were combined and
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude material which was purified using column
chromatography to furnish 4.2 (0.120 g, 51.77%). MS (ES): m/z 236
[M+H].sup.+.
[0374] Synthesis of compound 4.3. To a solution of compound 4.2
(0.120 g, 0.5106 mmol, 1.0 equiv) in methanol (5 mL) was added with
10% Pd/C (0.012 mg) under nitrogen atmosphere. Suspension was
purged with H.sub.2 gas for 3 hours. Reaction mixture was filtered
through celite and obtained filtrate was concentrated under reduced
pressure to get crude compound 4.3 (0.105 g) which was used as such
for the next step, MS (ES): m/z 206.0 [M+H].sup.+.
[0375] Synthesis of compound 4.5. To a solution of compound 4.4
(0.2 g, 0.4645 mol, 1.0 equiv) in 1,4-dioxane (3 mL) were added
compound 4.3 (0.104 g, 0.5109 mmol, 1.1 equiv) and potassium
carbonate (0.160 g, 1.161 mmol, 2.5 equiv). The reaction mixture
was degassed for 10 minutes using argon gas, then
Pd.sub.2(dba).sub.3 (0.042 g, 0.0464 mmol, 0.1 equiv) and Xantphos
(0.053 g, 0.0929 mmol, 0.2 equiv) were added. Suspension was
degassed for additional 5 minutes. The reaction was then heated at
110.degree. C. for 2 h. After completion of reaction, reaction
mixture was poured in water and product was extracted with ethyl
acetate. Organic layers were combined and dried over sodium
sulphate and concentrated under reduced pressure to obtain crude
material which was purified using column chromatography to afford
pure 4.5 (0.12 g, 43.1%). MS (ES): m/z 600.3 [M+H].sup.+.
[0376] Synthesis of compound I-4. The compound 4.5 was dissolved in
HBr in acetic acid (2 ml) and stirred at room temperature for 1 h.
After completion of the reaction, mixture was poured into water and
basified with saturated bicarbonate solution and product was
extracted with ethyl acetate. Organic layers were combined and
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude material which was purified using column
chromatography to get pure compound I-4 (0.052 g, 57.8%). MS (ES):
m/z 450.21 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHZ): 9.47
(s, 1H), 8.80 (s, 1H), 8.34 (s, 1H), 7.94 (d, 1H), 7.60 (m, 1H),
7.40 (dd, 1H), 7.25 (m, 2H), 7.10 (d, 1H), 4.40 (s, 4H), 3.36 (t,
2H), 2.80 (dd, 2H), 1.83 (s, 4H).
Example 5. Synthesis of
4-((4-(8-oxa-3-azabicyclo[3.2.1]octane-3-carbonyl)phenyl)-amino)-2-(2,6-d-
ifluorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one,
I-5
##STR00126##
[0378] To a solution of 5.1 (0.1 g 0.26 mmol, 1.0 eq) in dry THF
(5.0 mL) was added EDCl-HCl (0.1 g, 0.52 mmol, 2.0 eq) followed by
HOBt (0.069 g, 0.39 mmol, 1.5 eq) at 0.degree. C. Solution was
allowed to stir at 0.degree. C. for 1 hour.
8-oxa-3-azabicyclo[3.2.1]octane (0.035 g, 0.312 mmol, 1.2 eq) was
added followed by DIPEA (0.1 g, 0.78 mmol, 3.0 eq). Reaction
mixture was allowed to warm to room temperature and was stirred
overnight. After completion of the reaction, mixture was poured
into water and extracted using ethyl acetate (50 mL.times.2).
Organic layer was washed with by brine solution, dried over sodium
sulfate and concentrated under reduced pressure. Crude was purified
by column chromatography to afford pure compound I-5 (65 mg,
52.1%). MS (ES): M/z 478.53 [M+H].sup.+, .sup.1H NMR (400 MHz,
DMSO-d.sub.6): .delta. 9.226 (s, 1H), 8.963 (s, 1H), 7.828-7.849
(d, 2H), 7.568-7.641 (m, 1H), 7.373-7.394 (d, 2H), 7.249-7.343 (m,
2H), 4.505 (2H), 4.358 (m, 2H), 7.193 (m, 1H), 3.727-3.763 (m, 1H),
2.950-2.976 (m, 2H), 1.771 (m, 6H).
Example 6. Synthesis of
2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo-[3,4-d]pyrimid-
in-4-yl)amino)phenyl)-2-hydroxypropanoic acid, I-6
##STR00127##
[0380] Synthesis of compound 6.2. To a suspension of NaH (0.740 g,
18.45 mmol, 1.5 eq) in DMF (10 mL) at 0.degree. C. was added 6.1
(0.76 g, 6.15 mmol, 0.5 eq) followed by ethyl 2-chloropropionate
(1.68 g, 12.3 mmol, 1 eq) dropwise via a syringe. The reaction was
stirred at 0.degree. C. for 1 hour then for 2 hours at room
temperature. Benzaldehyde (0.98 g, 9.22 mmol, 0.75 eq) was added
and reaction was purged with oxygen for 16 hours. The reaction
mixture was quenched with ice; then dil. HCl was added. Product was
extracted with ethyl acetate (20 mL.times.2). Organic layers were
combined and dried over sodium sulphate and concentrated under
reduced pressure. Crude was purified using column chromatography to
furnish 6.2 (0.466 g, 31.6%). MS (ES): m/z no ionisation
[M+H].sup.+.
[0381] Synthesis of compound 6.3. To a solution of 6.2 (0.266 g,
1.112 mmol, 1.0 eq) in methanol (3 mL) and water (3 mL) was added
NH.sub.4Cl (0.350 g, 5.564 mmol, 5.0 eq) followed by iron powder
(0.311 g, 5.564 mmol, 5.0 eq) for 1 h. Reaction mixture was heated
at 80.degree. C. for 2 hours. Reaction mixture was filtered through
celite, washed with methanol and obtained filtrate was concentrated
under reduced pressure to get crude 6.3 (0.2 g, 85.96%) which was
used as such for the next step, MS (ES): m/z 210 [M+H].sup.+.
[0382] Synthesis of compound 6.4. To a solution of 1.1 (0.3 g, 0.69
mmol, 1.0 eq) in 1-butanol (5 mL) were added 6.3 (0.159 g, 0.764
mmol, 1.1 eq) and DIPEA (0.4 mL, 2.08 mmol, 3 eq). Reaction was
stirred at 100.degree. C. for 2 hours. After completion of the
reaction, reaction mixture was poured into water and product was
extracted with EtOAc (100 mL.times.2). Organic layer were combined,
dried over sodium sulphate and concentrated under reduced pressure.
Crude was purified purified by column chromatography to furnish 6.4
(0.3 g, 71.4%). MS (ES): m/z 605.3 [M+H].sup.+.
[0383] Synthesis of compound 6.5. Compound 6.4 (0.3 g, 0.496 mmol,
1.0 eq) was dissolved in HBr/HOAc mixture (3 mL) and stirred at
room temperature for 1 hour. After completion, reaction mixture was
poured into water and basified with saturated bicarbonate solution.
Product was extracted with EtOAc (100 mL.times.2). Organic layers
were combined, dried over sodium sulphate and concentrated under
reduced pressure. The crude was purified using column
chromatography to provide 6.5 (0.125 g, 55.44%). MS (ES): m/z 455.2
[M+H].sup.+.
[0384] Synthesis of compound I-6. To a solution of 6.5 (0.125 g,
0.275 mmol, 1.0 eq) in MeOH (3 mL) and water (3 mL) was added NaOH
(0.066 g, 1.65 mmol, 6.0 eq). Reaction was stirred at room
temperature for 1 hour. Solvent was concentrated under reduced
pressure and reaction mixture was acidified with diluted HCl and
extracted with EtOAc (25 mL.times.2). Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure.
The crude was triturated with diethyl ether and pentane to get pure
compound I-6 (0.08 g, 68.2%). MS (ES): m/z 427.3 [M+H].sup.+.
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): 12.67 (s, 1H), 9.081 (s, 1H),
8.90 (s, 1H), 7.70 (d, 2H), 7.60 (m, 1H), 7.47 (d, 2H), 7.27 (t,
2H), 5.76 (s, 1H), 4.48 (s, 2H), 1.6 (s, 3H).
Example 7. Synthesis of
(S)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-2-hydroxypropanoic acid, I-7
##STR00128##
[0386] Compound I-7 was obtained by chiral separation of compound
I-6. MS (ES): m/z [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 12.65 (s, 1H), 9.079 (s, 1H), 8.904 (s, 1H), 7.70-7.72 (d,
2H), 7.60 (m, 1H), 7.58 (d, 2H), 7.25-7.30 (m, 2H), 4.48 (s, 2H),
1.60 (s, 3H).
Example 8. Synthesis of
(R)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-2-hydroxypropanoic acid, I-8
##STR00129##
[0388] Compound I-8 was obtained by chiral separation of compound
I-6. MS (ES): m/z [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 9.06 (s, 1H), 8.88 (s, 1H), 7.68-7.70 (d, 2H), 7.58-7.62
(m, 1H), 7.47-7.49 (d, 2H), 7.25-7.29 (m, 2H), 4.47 (s, 2H),
1.58-1.62 (d, 3H).
Example 9. Synthesis of compound
2-amino-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]-
pyrimidin-4-yl)amino)phenyl)-N-ethylpropanamide, I-9
##STR00130##
[0390] Synthesis of compound 9.2. To a solution of 9.1 (1 g 7.1
mmol, 1.0 eq.) in CH.sub.2Cl.sub.2 (10 mL) was added
diphenylmethanimine (1.3 g, 7.1 mmol, 1.0 eq.). Reaction was
stirred at ambient temperature for 16 hours. After completion of
the reaction, mixture was poured into water (200 mL) and extracted
using EtOAc (100 mL.times.3). Organic layer was washed with
saturated brine solution, dried over sodium sulfate and
concentrated under reduced pressure. Crude was purified using
column chromatography to afford 9.2 (1.4 g, 54%). MS (ES): m/z
268.33 [M+H].sup.+.
[0391] Synthesis of compound 9.3. To a stirred solution of 9.2 (1.4
g, 0.52 mmol, 1.0 eq) and 1-bromo-3-nitrobenzene (2.1 g, 10.5 mmol,
2.0 eq) in THF (18 mL) and DMF (4 mL) at -78.degree. C. was added a
solution Potassium tert-butoxide (0.88 g 10.5 mmol, 2.0 eq.) in THF
(5 mL) dropwise. Reaction mixture was stirred for further 30
minutes, then treated with
2,3-Dichloro-5,6-dicyano-1,4-benzoquinone (1.4 g, 6.3 mmol, 1.20
eq) in THF (2 mL). After 5 minutes of stirring the cooling bath was
removed and the reaction mixture allowed to reach ambient
temperature. Compound was directly purified by column
chromatography to afford pure 9.3 (1.2 g, 49.03%), MS (ES): m/z
468.3 [M+H].sup.+.
[0392] Synthesis of compound 9.4. To a solution of 9.3 (1.2 g) in
acetonitrile was added 6 N HCl solution (20 mL). Reaction was
stirred at room temperature for 6 hours. Upon completion, reaction
mixture was poured into satd. Na.sub.2CO.sub.3 (500 mL) and
extracted with EtOAc (200 mL.times.3). Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography, to get pure 9.4 (0.7 g, 90%). MS (ES): m/z 304.11
[M+H].sup.+.
[0393] Synthesis of compound 9.5. To a solution of 9.4 (500 mg 1.65
mmol, 1.0 eq.) in EtOAc:H.sub.2O (10 mL) were added Boc anhydride
(680 mg, 3.1 mmol, 1.9 eq.) and lithium carbonate (260 mg, 3.6
mmol, 2.2 eq.). Reaction was heated at 60.degree. C. for 24 hours.
Upon completion, reaction mixture was poured into water (100 mL)
and extracted with EtOAc (50 mL.times.3). Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography to furnish 9.5 (0.55 g, 59.1%). MS (ES): m/z 404.11
[M+H].sup.+.
[0394] Synthesis of compound 9.6. A solution of 9.5 (500 mg 1.24
mmol, 1.0 eq.) in MeOH/H.sub.2O water (10 mL) was charged with
added LiOH (0.16 g, 3.7 mmol, 3 eq.) and stirred at ambient
temperature for 3 hours. Upon completion, reaction mixture was
poured into water (100 mL) and extracted with ethyl acetate (50
mL.times.3). Organic layers were combined, dried over sodium
sulphate and concentrated under reduced pressure to get 9.6 (0.5 g,
94%). MS (ES): m/z 390.2 [M+H].sup.+.
[0395] Synthesis of compound 9.7. To a solution of 106.6 (500 mg
1.28 mmol, 1.0 eq.) in THF (2.0 mL) was added Ethylamine (1M
solution in THF) (0.7 mL, 1.59 mmol, 1.2 eq.), HATU (720 mg 1.92
mmol, 1.5 eq.) and DIPEA (0.7 ml, 3.8 mmol, 3 eq.) at 0.degree. C.
The reaction was stirred at room temperature for 16 hours. Upon
completion, reaction mixture was poured into water (100 mL) and
extracted using EtOAc (50 mL.times.3). Organic layers were
combined, washed with saturated brine solution, dried over sodium
sulfate and concentrated under reduced pressure. Resulting crude
was purified by column chromatography to afford 9.7 (0.3 g, 56%).
MS (ES): m/z 417.27 [M+H].sup.+.
[0396] Synthesis of compound 9.8. To a suspension of Pd/C (100 mg)
in MeOH (15 ml) was added 9.7 (0.3 g, 0.75 mmol. 1.0 eq.) under
nitrogen atmosphere. Reaction mixture was purged with H.sub.2 gas
at room temperature for 12 hours. After completion of the reaction,
reaction mixture was filter through celite. Solvent was removed
under reduced pressure to afford 9.8 (0.12 g, 54%). MS (ES): m/z
308.7 [M+H].sup.+
[0397] Synthesis of compound 9.9. To a solution of 1.1 (91 mg 0.21
mmol, 1.0 eq.) in 1-butanol (2.0 mL) was added 1.7 (65 mg, 0.21
mmol, 1.0 eq.) and DIPEA (0.11 mL, 0.63 mmol, 3 eq.) at room
temperature. Reaction was stirred at 90.degree. C. for 3 hours.
Upon completion mixture was poured into water (50 mL) and extracted
using EtOAc (30 mL.times.3). Organic layers were combined, washed
with saturated brine solution, dried over sodium sulfate and
concentrated under reduced pressure. The crude was purified using
column chromatography to afford 9.9 (0.08 g, 54%). MS (ES): m/z
703.2 [M+H].sup.+
[0398] Synthesis of compound I-9. A solution of 9.9 (0.08 g, 0.13
mmol, 1.0 eq.) in HBr/HOAc solution (33%, 3 mL) was stirred at room
temperature for 45 minutes. After completion of the reaction,
mixture was poured into cold water, neutralized with NaHCO.sub.3
and extracted with EtOAc (75 mL.times.2). Solvent was removed under
reduced pressure, and crude purified by column chromatography to
afford I-9 (35 mg, 68%). MS (ES): m/z--408.3 [M+H].sup.+, .sup.1H
NMR (400 MHz, DMSO-d.sub.6): .delta. 9.04 (s, 1H), 8.89 (s, 1H),
7.90 (t, 1H), 7.68 (d, 2H), 7.60 (t, 1H), 7.43 (d, 2H), 7.27 (t,
2H), 4.47 (s, 2H), 3.07-3.02 (m, 2H), 1.51 (d, 3H), 0.98 (t,
3H).
Example 10. Synthesis of
2-(2,6-difluorophenyl)-4-((3,3-dimethyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyri-
din-6-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-10
##STR00131## ##STR00132##
[0400] Synthesis of compound 10.2. To a solution of 10.1 (7.0 g,
54.54 mmol, 1.0 equiv) and pivaloyl chloride (6.7 mL, 57.0 mmol,
1.05 equiv) in toluene was added Et.sub.3N (7.7 mL, 57.0 mmol, 2.5
equiv) and stirred at 60.degree. C. for 16 hours. Upon completion,
reaction mixture was poured into water (500 mL) and extracted with
EtOAc (200 mL.times.3). Organic layers were combined, dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide pure
10.2 (9.0 g, 77.7%). MS (ES): m/z 213.3 [M+H].sup.+.
[0401] Synthesis of compound 10.3. To a solution of 10.2 (9 g, 42
mmol, 1 eq) in THF (90 mL) was added tert-Butyllithium (1.6 M in
pentane) (62 mL, 90.0 mmol, 2.2 eq) at -78.degree. C. Reaction
mixture was stirred at -78.degree. C. for 3 hours. A solution of
iodine (12.7 g, 50.0 mmol, 1.2 eq) in THF (40 mL) was added
dropwise, at -78.degree. C. Reaction was warmed to ambient
temperature and stirred for 2 hours. Upon completion, reaction
mixture was poured in diluted HCl (200 mL) and extracted with ethyl
acetate (200 mL.times.3). Organic layers were combined, dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to get 10.3 (8.0
g, 55.84%), MS (ES): m/z 339.3 [M+H].sup.+.
[0402] Synthesis of compound 10.4. To a solution of 10.3 (8.0 g,
23.63 mmol, 1.0 eq) in 1-4 dioxane was added 2N HCl solution (20
mL). Reaction was stirred at 80.degree. C. for 3 hours. Reaction
mixture was poured in saturated solution of NaHCO.sub.3 (500 mL)
and extracted with EtOAc (200 mL.times.3). Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography, to provide 10.4 (4.2 g, 70%). MS (ES): m/z 255.46
[M+H].sup.+.
[0403] Synthesis of compound 10.5. To a solution of 10.4 (1.5 g,
5.9 mmol, 1.0 eq) in THF was added 3-bromo-2-methylprop-1-ene (0.95
g, 7.08 mmol, 1.2 eq) and potassium tert-butoxide (0.8 g, 7.08
mmol, 1.2 eq). Reaction was and stirred at room temperature for 3
hours. Reaction mixture was poured in water (200 mL) and extracted
with EtOAc (100 mL.times.3). Organic layers were combined and dried
over sodium sulphate, concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide 110.5
(1.5 g, 82%). MS (ES): m/z 309.55 [M+H].sup.+.
[0404] Synthesis of compound 10.6. To a solution of 10.5 (1.5 g,
4.48 mmol, 1.0 eq) in toluene (15 mL) was added potassium formate
(500 mg, 5.8 mmol, 1.2 eq), tetra-butyl ammonium chloride (1.6 g,
5.8 mmol, 1.2 eq) and Et.sub.3N (2 mL, 1.4 mmol, 3 eq) at room
temperature under argon bubbling for 15 minutes. To the above
reaction mixture was added Pd(OAc).sub.2 (53 mg, 0.29 mmol, 0.1 eq)
under argon bubbling for 10 minutes. Reaction mixture was heated at
100.degree. C. for 1 hour. After completion of the reaction,
reaction mixture was poured into water (100 mL) and extracted using
ethyl acetate (50 mL.times.3). Organic layers were washed with by
brine solution, combined and dried over sodium sulphate and
concentrated under reduced pressure. Resulting crude was purified
by column chromatography to provide 10.6 (0.8 g, 90%). MS (ES): m/z
183.5 [M+H].sup.+.
[0405] Synthesis of compound 10.7. To a solution of 10.6 (0.6 g,
3.2 mmol, 1.0 eq) and Boc-anhydride (1.0 g, 4.86 mmol, 1.5 eq) in
dichloromethane was added DMAP (39 mg, 0.32 mmol, 0.1 eq). Reaction
was stirred at room temperature for 1 hour. Upon completion,
mixture was poured into water (100 mL) and extracted with EtOAc (50
mL.times.3). Organic layers were combined, dried over sodium
sulphate and concentrated under reduced pressure to obtain crude
material. The crude was purified by column chromatography to
provide 10.7 (0.8 g, 86%). MS (ES): m/z 283.2 [M+H].sup.+.
[0406] Synthesis of compound 10.8. To a solution of 10.7 (0.2 g
0.70 mmol, 1.0 eq) in dry THF (5.0 mL) was added LHMDS (1.0 M in
THF) (2.1 mL, 2.1 mmol, 3.0 eq) at room temperature under argon
bubbling for 15 minutes. To the above reaction mixture was added
Pd.sub.2(dba).sub.3 (62 mg, 0.068 mmol, 0.1 eq) and
2-Biphenyl)di-tert-butylphosphine, (48 mg, 0.021 mmol, 0.2 eq)
under argon bubbling for 10 minutes. Reaction mixture was heated at
60.degree. C. temperature for 2 hours. After completion of the
reaction, reaction mixture was poured into water (50 mL) and
extracted using ethyl acetate (30 mL.times.3). Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. Crude
was purified by column chromatography to provide 10.8 (0.08 g,
43.0%). MS (ES): m/z 264.2 [M+H].sup.+.
[0407] Synthesis of compound 10.9. To a solution of 4.4 (0.10 g
0.23 mmol, 1.0 eq) in dry dioxane (5.0 mL) was added 10.8 (67 mg,
0.23 mmol, 1.0 eq), K.sub.2CO.sub.3 (0.095 g, 0.60 mmol, 3.0 eq.)
at room temperature under argon bubbling for 15 minutes. To the
above reaction mixture was added Pd.sub.2(dba).sub.3 (21 mg, 0.023
mmol, 0.1 eq) and Xantphos (26 mg, 0.046 mmol, 0.2 eq) under argon
bubbling for 10 minutes. Reaction mixture was heated at 105.degree.
C. temperature for 3-4 hours. After completion of the reaction,
reaction mixture was poured into water and extracted using ethyl
acetate. Organic layers were combined, washed with brine, then
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude material. Crude was purified by column
chromatography to furnish 10.9 (0.08 g, 53.0%). MS (ES): m/z 658.20
[M+H].sup.+.
[0408] Synthesis of compound I-10. A solution of 10.9 (80 mg) in
HBr/HOAc solution (33%, 5 ml) was stirred at room temperature for 1
hour. After completion of the reaction, reaction mixture was poured
into cold water, neutralized with NaHCO.sub.3 and extracted with
ethyl acetate (50 ml.times.2). Solvent was removed under reduced
pressure and resulting crude was purified by column chromatography
to furnish compound I-10 (30 mg, 60.0%). MS (ES): m/z 501.58
[M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6): .delta. 9.48 (s,
1H), 8.82 (s, 1H), 8.38 (s, 1H), 7.60-7.52 (m, 1H), 7.27-7.23 (m,
3H), 6.54 (s, 1H), 6.15 (d, 1H), 4.41 (s, 2H), 3.20 (s, 2H), 1.21
(s, 6H).
Example 12. Synthesis of
2-(2,6-difluorophenyl)-4-((4-((1,3-dihydroxypropan-2-yl)oxy)phenyl)amino)-
-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-12
##STR00133##
[0410] Synthesis of compound 12.1. To a solution of 1.1 (0.140 g,
0.324 mmol, 1.0 eq.) in DMSO (2 mL), 4-(oxetan-3-yloxy)aniline
(0.051 g, 0.308 mmol, 0.95 eq) and DIPEA (0.16 mL, 0.974 mmol, 3.0
eq) were added at room temperature. Reaction mixture was heated at
90.degree. C. for 1 hour. After completion of the reaction, mixture
was poured into cold water and extracted using ethyl acetate (20
mL.times.2). Organic layers were combined and dried over sodium
sulfate and concentrated under reduced pressure. Crude was purified
by column chromatography to afford 12.1 (0.130 g, 71.53%). MS (ES):
m/z 560.5 [M+H].sup.+
[0411] Synthesis of compound I-12. A solution of 12.1 (0.130 g,
0.232 mmol, 1 eq) in TFA (6 mL) was heated at 70.degree. C. for 8
hours. After completion of the reaction, reaction mixture was
poured in cold water, neutralized with saturated sodium bicarbonate
solution and extracted with ethyl acetate (10 mL.times.2). Solvent
was removed under reduced pressure and resulting crude was purified
using column chromatography to provide I-12 (0.030 g, 30.2%). MS
(ES): m/z 428.4 [M+H].sup.+; .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 8.96 (s, 1H), 8.84 (s, 1H), 7.61-7.51 (m, 3H), 7.27-7.23
(t, 2H), 6.97-6.94 (d, 2H), 4.78-4.75 (t, 2H), 4.46 (s, 2H),
4.21-4.18 (q, 1H), 3.60-3.50 (m, 4H).
Example 13. Synthesis of compound
2-(2,6-difluorophenyl)-4-((4-methoxybenzyl)-amino)-6,7-dihydro-5H-pyrrolo-
[3,4-d]pyrimidin-5-one I-13
##STR00134##
[0413] Synthesis of compound 13.1. To a solution of 1.1 (0.150 g
0.348 mmol, 1.0 eq) in 1-butanol (2.0 mL) was added 4-Methoxy
benzyl amine (0.047 g, 0.348 mmol, 1.0 eq) and DIPEA (0.18 ml, 1.04
mmol, 3 eq) at room temperature. Reaction mixture was stirred at
120.degree. C. for 3 hours. After completion of the reaction,
mixture was poured into water and extracted using ethyl acetate.
Organic layer was washed with brine, dried over sodium sulfate and
concentrated under reduced pressure. Crude was purified by column
chromatography to afford pure 13.1 (0.110 g, 59.5%), MS (ES): m/z
533.6 [M+H].sup.+
[0414] Synthesis of compound I-13. To a solution of 13.1 (0.11 g,
0.206 mmol, 1.0 eq.) in HBr/HOAc solution (33%, 3 ml) was stirred
at room temperature for 1 hour. After completion of reaction,
mixture was poured in cold water, neutralized with NaHCO.sub.3 and
extracted with ethyl acetate (25 mL.times.2). Solvent was removed
under reduced pressure and resulting crude purified using column
chromatography to provide I-13 (0.045 g, 56.9%). MS (ES):
m/z--383.4 [M+H].sup.+; .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 8.59 (s, 1H), 7.87 (m, 1H), 7.56 (m, 1H), 7.29-7.21 (m,
4H), 6.86 (d, 2H), 4.60 (d, 2H), 4.36 (s, 2H), 3.71 (s, 3H).
Example 14. Synthesis of
2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidi-
n-4-yl)amino)phenyl)-N-ethyl-2-hydroxypropanamide, I-14
##STR00135##
[0416] Synthesis of compound 14.2. To a solution of 14.1 (5.0 g,
30.3 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (50 mL) was added TMSCN
(4.55 mL, 36.34 mmol, 1.2 eq) followed by TiCl.sub.4 (1.14 g, 6.05
mmol, 0.2 eq) drop wise at room temperature. The reaction was
stirred at room temperature for 18 hours. The reaction mixture was
quenched with ice cold water and product was extracted with
CH.sub.2Cl.sub.2 (50 mL.times.2). Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure
to obtain 14.2 (5.8 g, 99.69%). MS (ES): m/z No ionisation
[M+H].sup.+.
[0417] Synthesis of compound 14.3. To a solution of 14.2 (5.8 g,
30.2 mmol, 1.0 eq) in 1,4-dioxane (100 mL) was added cone. HCl (50
mL, eq). Reaction mixture was heated at 120.degree. C. for 5 hours.
Reaction mixture was concentrated under reduced pressure. Residue
was dissolved in ethyl acetate, washed with saturated sodium
bicarbonate solution. Organic layer was separated, dried over
sodium sulaphate and concentrated under reduced pressure to obtain
14.3 (4.7 g, 73.74%) which was used as such for the next step, MS
(ES): m/z 210 [M+H].sup.+
[0418] Synthesis of compound 14.4. To a solution of 14.3 (4.7 g,
22.3 mmol, 1.0 eq) in DMF (50 mL) was added ethyl amine (13.4 mL,
26.7 mmol, 1.2 eq), DIPEA (7.62 mL, 44.5 mmol, 2 eq) and HATU
(10.16 g, 26.7 mmol, 1.2 eq). The reaction mixture was stirred at
room temperature for 1 hour. Upon completion mixture was diluted
with EtOAc (100 mL) and washed with saturated NaHCO.sub.3. Organic
layer was dried over sodium sulphate and concentrated under reduced
pressure to obtain 14.4 (3.6 g, 67.9%). MS (ES): m/z 239.3
[M+H].sup.+.
[0419] Synthesis of compound 14.5. Compound 14.4 (3.6 g, 15.1 mmol,
1.0 eq) was dissolved in MeOH (3 mL) and added to 10% Pd/C.
Hydrogen gas was bubbled though reaction mixture for 2 hours. After
completion of the reaction, reaction mixture was filtered through
celite. Filtrate was concentrated under reduced pressure to obtain
14.5 (3.12 g, 99.14%). MS (ES): m/z 209.2 [M+H].sup.+.
[0420] Synthesis of compound 14.6. To a solution of 1.1 (0.3 g,
0.69 mmol, 1.0 eq) in 1-butanol (5 mL) was added 14.5 (0.16 g, 0.76
mmol, 1.1 eq) and DIPEA (0.4 mL, 2.08 mmol, 3.0 eq). The reaction
was stirred at 120.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into water and product was extracted
with EtOAc (50 mL.times.2). Organic layers were combined and dried
over sodium sulphate and concentrated under reduced pressure to
obtain crude which was purified by column chromatography to furnish
14.6 (0.35 g, 83.46%). MS (ES): m/z 604.5 [M+H].sup.+.
[0421] Synthesis of compound I-14. Mixture of 14.6 (0.3 g, 0.49
mmol, 1.0 eq) and HBr/HOAc (5 mL) was stirred at room temperature
for 1 hour. Reaction mixture was neutralized using saturated
NaHCO.sub.3 and extracted with EtOAc (25 mL.times.2). Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to furnish I-14 (0.17 g, 75.4%). MS (ES): m/z 454.7
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.05 (s,
1H), 8.89 (s, 1H), 7.83-7.86 (t, 1H), 7.66-7.68 (d, 2H), 7.58-7.60
(m, 1H), 7.46-7.48 (d, 2H), 7.25-7.29 (m, 2H), 6.01 (s, 1H), 4.47
(s, 2H), 3.03-3.08 (m, 2H), 1.58 (s, 3H), 0.94-0.98 (t, 3H).
Example 15. Synthesis of
(S)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-N-ethyl-2-hydroxypropanamide, I-15
##STR00136##
[0423] Compound I-15 was obtained by chiral separation of compound
I-14. MS (ES): m/z 454.7 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO):
.delta. 9.05 (s, 1H), 8.89 (s, 1H), 7.84-7.87 (t, 1H), 7.66-7.68
(d, 2H), 7.58-7.62 (m, 1H), 7.46-7.48 (d, 2H), 7.24-7.29 (t, 2H),
6.01 (s, 1H), 4.47 (s, 2H), 2.99-3.08 (m, 2H), 1.58 (s, 3H),
0.94-0.98 (t, 3H)
Example 16. Synthesis of
(R)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-N-ethyl-2-hydroxypropanamide. I-16
##STR00137##
[0425] Compound I-16 was obtained by chiral separation of compound
I-14. MS (ES): m/z 454.54 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO):
.delta. 9.05 (s, 1H), 8.89 (s, 1H), 7.84-7.87 (t, 1H), 7.66-7.68
(d, 2H), 7.58-7.62 (m, 1H), 7.46-7.48 (d, 2H), 7.25-7.29 (t, 2H),
6.01 (s, 1H), 4.47 (s, 2H), 3.01-3.07 (m, 2H), 1.58 (s, 3H),
0.94-0.98 (t, 3H).
Example 17. Synthesis of
2-(2,6-difluorophenyl)-4-((2,3-dihydro-1H-pyrrolo[3,2-c]pyridin-6-yl)amin-
o)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-17
##STR00138## ##STR00139##
[0427] Synthesis of compound 17.2 To a solution of 17.1 (5.0 g,
39.0 mmol, 1.00 eq) in ethoxyethene (11.25 g, 156.0 mmol, 4.0 eq)
was added palladium acetate slowly. Reaction was stirred at room
temperature for 20 h. After completion of the reaction, the
resulting solution was filtered through celite, washed with ethyl
acetate and filtrate was distilled under reduced pressure to afford
crude material which was purified by column chromatography to
afford pure 17.2 (1.0 g, 12.92%). MS (ES): m/z 199.1
[M+H].sup.+.
[0428] Synthesis of compound 17.4. To a solution of 17.3 (5.0 g,
54.6 mmol) in acetic acid (10 ml) was added sodium acetate (8.938
g, 109.0 mmol, 2.0 eq) and iodine monochloride (4.069 g, 65.5 mmol,
1.2 eq). Reaction mixture was heated at 70.degree. C. for 20 hours.
After completion of the reaction, mixture was concentrated under
reduced pressure and residue was diluted with water and basified
with sodium bicarbonate solution. Compound was extracted in EtOAc
and washed with brine. Organic layer was separated, dried over
sodium sulphate and concentrated under reduced pressure to afford
crude material which was purified by chromatography using 12% to
afford pure 17.4 (2.8 g, 28.2%), m/z=255.1 [M+H].sup.+.
[0429] Synthesis of compound 17.5. In a seal tube 17.4 (0.200 g,
0.78 mmol, 1 eq) and 17.2 (0.202 g, 1.02 mmol, 1.3 eq) was
dissolved in DMF (5 mL). LiOH (0.095 g, 2.34 mmol, 3.0 eq) was
added into the reaction mixture. Reaction mixture was degassed by
argon gas for 10-15 mins. PdCl.sub.2(dppf) (0.063 g, 0.078 mmole,
0.1 eq.) was then added. Reaction mixture was further degassed by
argon gas for 10 min. Reaction mixture was heated with stirring at
70.degree. C. for 16 hours, After completion of the reaction, water
was added and product was extracted with EtOAc (2.times.50 ml),
organic layer was separated, dried over sodium sulphate and
concentrated under reduced pressure to afford crude material which
was purified by column chromatography to afford pure compound 17.5
(0.04 g, 25.62%). MS (ES): m/z 199.2 [M+H].sup.+.
[0430] Synthesis of compound 17.6. A solution of 17.5 (0.04 g,
0.202 mmol, 1.00 eq) in MeOH (1 mL) and HCl (0.1 ml) was heated to
reflux for overnight. After completion of the reaction, mixture was
concentrated and residue was basifed with K.sub.2CO.sub.3 and
extracted with EtOAc (2.times.50 ml). Organic layer was dried over
sodium sulphate and concentrated under reduced pressure to afford
crude material which was purified by column chromatography to
afford pure compound 17.6 (0.025 g, 81.4%). MS (ES): m/z 153.5
[M+H].sup.+.
[0431] Synthesis of compound 17.7. A solution of 17.6 (0.25 g, 1.10
mmol, 1.00 eq) and a Borane dimethyl sulfide complex solution (2.0M
in THF) (2 mL) in THF (1.0 mL) was heated at 68.degree. C. for 3 h.
Reaction mixture was cooled to room temperature and poured in
water; product was extracted with EtOAc (50 mL.times.3). Combined
organic layers were washed with brine, dried over sodium sulphate
and concentrated under reduced pressure. The residue was purified
using silica gel column to afford the compound 17.7 (0.08 g, 31.58,
MS (ES): m/z 155.6 [M+H].sup.+.
[0432] Synthesis of compound 17.8. A solution of 17.7 (0.08 g,
0.519 mmol, 1.00 eq), Di-tert-butyl-dicarbonate (0.191 g, 0.876
mmol, 1.5 eq) and DMAP (0.01 g, 0.058 mmol, 0.1 eq) in THF (10 mL)
was stirred at room temperature for 3 hours. After completion, the
reaction was diluted with water and product was extracted with
ethyl acetate (25 mL.times.3) and washed with brine. The combined
organic layers were dried and concentrated under vacuum. Crude was
purified by column chromatography to afford 17.8 (0.06 g, 45.52%).
MS (ES): m/z 255.1 [M+H].sup.+.
[0433] Synthesis of compound 17.9. A solution of 17.8 (0.04 g 0.157
mmol, 1.0 eq) in dry THF (0.4 mL) was degassed at room temperature
under argon for 15 minutes. To the above reaction mixture was added
Pd.sub.2(dba).sub.3 (0.014 g, 0.0157 mmol, 0.1 eq) and
2-Biphenyl-di-tert-butylphosphine (0.01 g, 0.031 mmol, 0.2 eq)
under argon purge for 10 minutes followed by LHMDS (7.8 mg, 0.047
mmol, 3.0 eq). Reaction mixture was heated at 68.degree. C. for 1
hour. After completion of the reaction, reaction mixture was poured
into water and extracted using EtOAc (25 mL.times.2). Organic layer
was washed with brine. Organic layer was dried over sodium sulfate
and concentrated under reduced pressure. Crude was purified using
column chromatography to afford pure 17.9 (0.028 g, 75.78%). MS
(ES): m/z 254.1 [M+H].sup.+.
[0434] Synthesis of compound 17.91. To a solution of 4.4 (0.08 g,
0.18 mmol, 1.0 eq) and 17.9 (0.043 g, 0.186 mmol, 1.0 eq) in
1,4-dioxane (2 mL) was added K.sub.2CO.sub.3 (0.051 g, 0.580 mmol,
3.0 eq). Reaction mixture was degassed under argon gas for 5-10
min. and Pd.sub.2(dba).sub.3 (0.016 g, 0.018 mmol, 0.1 eq) followed
by Xantphos (0.01 g, 0.018 mmol, 0.2 eq) was added and again
degassed under argon for 5 min. Reaction mixture was heated at
90.degree. C. for 4 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined and dried over sodium sulphate and
concentrated under reduced pressure to obtain crude material. Crude
was purified by column chromatography to get pure 133.91 (0.035 g,
29.94%). MS (ES): m/z 630.1 [M+H].sup.+.
[0435] Synthesis of compound I-17. A solution of 17.91 (0.035 g,
0.081 mmol. 1.0 eq.) in HBr/HOAc (33%, 1 ml) was stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into cold water, neutralized with Na.sub.2CO.sub.3
solution and product was extracted with ethyl acetate (25
mL.times.3). Solvent was removed under reduced pressure to get
crude material which was purified by column chromatography to
afford pure I-17 (0.012 g, 56.91%). MS (ES): m/z 468.1 [M+H].sup.+,
.sup.1H NMR (400 MHz, DMSO-d.sup.6): .delta. 9.39 (s, 1H), 8.81 (s,
1H), 8.48 (s, 1H), 7.71 (s, 1H), 7.60-7.55 (m, 1H), 7.27-7.23 (t,
2H), 6.55 (s, 1H), 6.02 (s, 1H), 4.39 (s, 2H), 3.78-3.67 (t, 2H),
2.92-2.88 (t, 2H).
Example 18. Synthesis of
2-(2,6-difluorophenyl)-4-((2,3,4,5-tetrahydropyrido[3,2-b][1,4]oxazepin-7-
-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-18
##STR00140##
[0437] Synthesis of compound 18.2. Compound 18.1 (2.0 g, 9.1 mmol,
1.0 eq), 3-bromopropan-1-ol (1.9 g, 13.6 mmol, 1.5 eq) and
PPh.sub.3 (3.59 g, 13.6 mmol, 1.5 eq) were dissolved in dry THF (40
mL) at 0.degree. C. and allowed to stir for 1 hour. Diisopropyl
azodicarboxylate (2.76 g, 13.6 mmol, 1.5 eq) was added at 0.degree.
C. and reaction mixture was allowed to stir for 3 hours. After
completion of reaction, water was added and product was extracted
with EtOAc (100 mL.times.2). Organic layer was separated out,
washed with brine, dried over sodium sulphate and concentrated
under reduced pressure to give crude product, which was purified by
column chromatography to afford compound 18.2 (1.8 g, 57.97%). MS
(ES): m/z=339.1 [M-H].sup.+
[0438] Synthesis of compound 18.3. To a solution of 18.2 (1.8 g,
5.3 mmol, 1.0 eq) in HOAc (18 mL) was added iron powder (1.18 g,
21.0 mmol, 4.0 eq). Reaction mixture was then heated at 90.degree.
C. for 1 hour. After completion of the reaction, EtOAc was added to
reaction mixture and reaction mixture was filtered through celite
and filtrate was concentrated under reduced pressure to afford
crude which was purified using column chromatography to afford
18.3. (1.2 g, 73.1%), MS (ES): m/z 311.1 [M+H].sup.+.
[0439] Synthesis of 18.4. To a cooled solution of NaH (60% in
mineral oil, 0.31 g, 7.7 mmol, 2.0 eq) in DMF (6 mL) was added 18.3
(1.2 g, 3.8 mmol, 1.0 eq) at 0.degree. C. and allowed to stir at
room temperature for 30 minutes. After completion of the reaction
saturated NH.sub.4Cl solution was added to reaction mixture and
product extracted with EtOAc (200 mL.times.2). Organic layer was
washed with brine solution, dried over sodium sulfate and
concentrated under reduced pressure to give crude product, which
was purified by column chromatography to afford compound 18.3 (0.4
g, 45.11%). MS (ES): m/z 227 [M-H].sup.+
[0440] Synthesis of compound 18.5. A solution of 18.4 (0.24, 1.04
mmol, 1.0 eq) in ammonium hydroxide (10 mL) was heated in
hydrogenator vessel at 10 psi for 24 h. After completion of the
reaction, mixture was concentrated under reduced pressure to give
crude product, which was triturated with diethyl ether to give pure
18.5 (0.09 g, 52.0%). MS (ES): m/z 166 [M-H].sup.+,
[0441] Synthesis of compound 18.6. To a solution of 18.5 (0.042 g
0.25 mmol, 1.1 eq) in dry 1,4-dioxane (1.0 mL) was added 4.4 (0.1
g, 0.23 mmol, 1.0 eq), K.sub.2CO.sub.3 (0.080 g, 0.04 mmol, 0.2 eq)
and Xantphos (0.026 g, 0.04 mmol, 0.2 eq) at room temperature and
it was degassed with argon for 15 minutes. To the above reaction
mixture was added Pd.sub.2(dba).sub.3 (0.021 g, 0.02 mmol, 0.1 eq)
and it was degassed again with argon for 15 minutes. Reaction
mixture was heated at 110.degree. C. for 4 hours. After completion
of the reaction, reaction mixture was poured into water and
extracted using ethyl acetate (50 mL.times.2). Organic layer was
washed with brine solution. Organic layers were combined and dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude, which was further purified by column chromatography
to afford pure 18.6 (0.052 g, 40.0%). MS (ES): m/z 560.2
[M+H].sup.+
[0442] Synthesis of compound I-18. A solution of 18.6 (0.055 g,
0.09 mmol, 1 eq) in HBr/HOAc (33%, 1 mL) was stirred at room
temperature for 1 hour. After completion of reaction, reaction
mixture was poured in cold water, neutralized with sodium
bicarbonate and product was extracted with EtOAc (25 mL.times.2).
Solvent was removed under reduced pressure at to get crude product,
which was purified by column chromatography to afford pure I-18
(0.022 g, 57.8%). MS (ES): m/z 410.20 [M+H].sup.+, .sup.1H NMR (400
MHz, DMSO-d6): .delta. 9.48 (s, 1H), 8.81 (s, 1H), 8.35 (s, 1H),
7.53-7.57 (t, 1H), 7.21-7.25 (t, 2H), 7.11-7.13 (d, 1H), 6.29-6.31
(d, 2H), 4.38 (s, 2H), 4.03-4.05 (t, 2H), 3.23-3.29 (m, 2H),
1.89-1.92 (t, 2H),
Example 19. Synthesis of
4-(6-amino-1H-pyrrolo[2,3-b]pyridin-1-yl)-2-(2,6-difluorophenyl)-6,7-dihy-
dro-5H-pyrrolo[3,4-b]pyridin-5-one, I-19
##STR00141##
[0444] Synthesis of compound 19.2. To a solution of 4.4 (0.050 g,
0.116 mmol, 1.0 eq) in 1,4-dioxane (1 mL) was added 19.1 (0.023 g,
0.174 mmol, 1.5 eq) and K.sub.2CO.sub.3 (0.04 g, 0.29 mmol, 2.5
eq). The reaction mixture was degassed for 10 min. under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.011 g, 0.012 mmol, 0.1 eq)
and Xantphos (0.013 g, 0.023 mmol, 0.2 eq) were added, again
degassed for 5 min. The reaction was then heated at 110.degree. C.
for 2 hours. After completion of reaction, reaction mixture was
poured in water and product was extracted with EtOAc. Organic layer
was combined and dried over sodium sulphate and concentrated under
reduced pressure to obtain crude which was purified using column
chromatography to get pure 19.2 (0.040 g, 65.4%). MS (ES): m/z
528.5 [M+H].sup.+.
[0445] Synthesis of compound I-19. Compound 19.2 (0.025 g, 0.0473
mmol, 1.0 eq.) was dissolved in HBr/HOAc (1 mL) and stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water and basified with saturated bicarbonate
solution was extracted with ethyl acetate. Organic layers were
combined and dried over sodium sulphate and concentrated under
reduced pressure to obtain crude which was purified to get pure
I-19 (0.012 g, 67.2%). MS (ES): m/z 378.3 [M+H].sup.+ 1H NMR
(DMSO-d.sub.6, 400 MHz): 8.95 (s, 1H), 8.27 (s, 1H), 6.49 (m, 3H),
7.30 (t, 2H), 6.43 (m, 2H), 5.86 (s, 2H), 4.55 (s, 2H).
Example 20. Synthesis of
4-((5-(6-azaspiro[2.5]octan-6-yl)pyridin-2-yl)amino)-2-(2,6-difluoropheny-
l)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-20
##STR00142##
[0447] Synthesis of compoiund 20.2. To a solution of 20.1 (0.2 g,
0.985 mmol, 1.0 eq) in DMSO (3 ml) was added TBAI (0.036 g, 0.0985
mmol, 0.1 eq), 6-azaspiro[2.5]octane (0.131 g, 1.182 mmol, 1.2 eq),
and K.sub.2CO.sub.3 (0.271 g, 1.97 mmol, 2 eq). Reaction mixture
was heated in microwave at 120.degree. C. for 4 hours. The reaction
mixture was poured into water and extracted with EtOAc. Organic
layers were combined and dried over sodium sulphate and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to get pure 20.2 (0.052 g,
22.70%). MS (ES): m/z 234.27 [M+H].sup.+.
[0448] Synthesis of compound 20.3. To a solution of 20.2 (0.052 g,
0.222 mmol, 1.0 eq) in MeOH (5 mL) was added with 10% Pd/C (0.0052
mg) under nitrogen atmosphere. It was purged with H.sub.2 gas for 1
h. Reaction mixture was filtered through celite and obtained
filtrate was concentrated under reduced pressure to get crude 20.3
(0.040 g) which was used as such for the the next step, MS (ES):
m/z 204.3 [M+H].sup.+.
[0449] Synthesis of compound 20.4. To a solution of 4.4 (0.08 g,
0.185 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 20.3 (0.04 g,
0.204 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.064 g, 0.464 mmol, 2.5
eq). The reaction mixture was degassed for 10 min. under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.0169 g, 0.0185 mmol, 0.1
eq) and Xantphos (0.021 g, 0.0371 mmol, 0.2 eq) were added, again
degassed for 5 min. The reaction was stirred 110.degree. C. for 4
hours. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAC. Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography get pure 20.4 (0.070 g, 63.10%). MS (ES): m/z 598.7
[M+H].sup.+.
[0450] Synthesis of compound I-20. Compound 20.4 (0.07 g, 0.117
mmol, 1.0 eq) was dissolved in HBr/HOAc (2 ml) and stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water, basified with saturated bicarbonate solution
and extracted with EtOAc. Organic layers were combined, dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified get pure I-20 (0.025 g, 47.7%). MS (ES):
m/z 448.5 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): 9.50
(s, 1H), 8.80 (s, 1H), 8.36 (s, 1H), 8.04 (d, 1H), 7.57 (m, 1H),
7.45 (dd, 1H), 7.25 (m, 2H), 7.08 (d, 1H), 4.40 (s, 2H), 3.18 (t,
4H), 1.44 (t, 4H), 0.32 (s, 4H)
Example 21. Synthesis of
4-((1H-pyrrolo[2,3-b]pyridin-6-yl)amino)-2-(2,6-difluoro-phenyl)-6,7-dihy-
dro-5H-pyrrolo[3,4-b]pyridin-5-one, I-21
##STR00143##
[0452] Synthesis of compound 21.1. To a solution of 19.1 (0.5 g,
3.75 mmol, 1.0 equiv) and NaOAc (0.49 g, 6.00 mmol, 1 equiv) in
acetic acid (5 mL) was added phtalic anhydride (0.667 g, 4.5 mmol,
1.2 equiv) and stirred at 120.degree. C. for 5 hours. Reaction
mixture was poured into water (50 mL) and extracted with EtOAc (20
mL.times.3). Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. Crude was stirred in aqueous satd. NaHCO.sub.3,
filtered then dried to get pure 21.1 (0.400 g, 40.46%). MS (ES):
m/z 264.3 [M+H].sup.+.
[0453] Synthesis of compound 21.2. To a solution of 21.1 (0.450 g,
1.70 mmol, 1 eq) in THF (4.5 mL) was added DMAP (0.020 g, 0.17
mmol, 0.1 eq) followed by di-tert-butyl dicarbonate (0.447 g, 2.05
mmol, 1.2 eq) 0.degree. C. Reaction mixture was stirred at room
temperature for 1 hour. Reaction mixture was poured into water (50
mL) and extracted with EtOAc (20 mL.times.3). Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography to afford 21.2 (0.50 g, 80.5%). MS (ES): m/z 364.3
[M+H].sup.+.
[0454] Synthesis of compound 21.3. To a solution of 21.2 (0.300 g,
0.825 mmol, 1.0 eq) in EtOH (3 mL) and CH.sub.2Cl.sub.2 (1 mL) was
added N.sub.2H.sub.4--H.sub.2O (99%) (0.040 mL, 0.83 mmol, 1.0 eq)
and stirred at room temperature for 1 hour. Reaction mixture was
poured into ice cold saturated solution of NaHCO.sub.3 (50 mL) and
extracted with EtOAC (20 mL.times.3). Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 21.3 (0.15 g, 77.9%). MS (ES): m/z 234.3 [M+H].sup.+.
[0455] Synthesis of compound 21.4. To a solution of 4.4 (0.10 g
0.23 mmol, 1.0 eq) in dry Dioxane (5.0 mL) was added 21.3 (0.081 g,
0.35 mmol, 1.5 eq) and K.sub.2CO.sub.3 (0.095 g, 0.60 mmol, 3.0
eq.) at room temperature under argon purge for 15 minutes. To the
above reaction mixture was added Pd.sub.2(dba).sub.3 (0.021 g,
0.023 mmol, 0.1 eq) and Xantphos (0.026 g, 0.046 mmol, 0.2 eq)
under argon purge for 10 minutes. Reaction mixture was stirred at
95.degree. C. temperature for 3 to 4 hours. After completion of the
reaction, mixture was poured into water and extracted using ethyl
acetate. Organic layers were combined, washed with brine, dried
over sodium sulphate and concentrated under reduced pressure to
obtain crude. Crude was purified by column chromatography to get
pure 21.4 (0.05 g, 34.32%). MS (ES): m/z 628.6 [M+H].sup.+.
[0456] Synthesis of compound I-21. A solution of 21.4 (0.025 g) in
HBr/HOAc solution (33%, 2 ml) was stirred at room temperature for 1
hour. After completion of the reaction, mixture was poured into
cold water, neutralized with NaHCO.sub.3 and extracted with ethyl
acetate (50 ml.times.2). Solvent was removed under reduced pressure
at 45.degree. C. Resulting crude was purified by column
chromatography to furnish I-21 (0.010 g, 66.58%). MS (ES): m/z
378.35 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6): .delta.
11.51 (s, 1H), 9.78 (s, 1H), 8.87 (s, 1H), 8.67 (s, 1H), 7.94 (d,
1H), 7.63-7.55 (m, 1H), 7.30-7.26 (m, 3H), 6.82 (d, 1H), 6.39 (s,
1H), 4.43 (s, 2H).
Example 22. Synthesis of
2-(2,6-difluorophenyl)-4-((2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-6-yl)amin-
o)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-22
##STR00144##
[0458] Synthesis of compound 22.1. To a solution of 21.4 (0.10 g
0.159 mmol, 1.0 eq) in EtOH (10.0 mL) and 1,2-Dimethoxyethane (10.0
mL) was added 10% Pd/C (0.010 mg) under nitrogen atmosphere.
Suspension was purged with hydrogen for 12 h. Reaction mixture was
filtered through celite and obtained filtrate was concentrated
under reduced pressure to get crude 22.1 (0.090 g, 89.72%) which
was used as such for the next step, MS (ES): m/z 630.7
[M+H].sup.+.
[0459] Synthesis of compound I-22. A solution of 22.1 (0.09 g) in
HBr/HOAc solution (33%, 2 ml) was stirred at room temperature for 1
hour. After completion of the reaction, mixture was poured into
cold water, neutralized with NaHCO.sub.3 and product was extracted
with EtOAc (50 ml.times.2). Solvent was concentrated under reduced
pressure to get crude which was triturated using Et.sub.2O (2.0 mL)
and MeOH (0.2 mL) to furnish I-22. (0.05 g, 92.2%). MS (ES): m/z
380.4 [M+H].sup.+; .sup.1H NMR (400 MHz, DMSO-d.sub.6): .delta.
9.46 (s, 1H), 8.81 (s, 1H), 8.34 (s, 1H), 7.56 (t, 1H), 7.27-7.23
(m, 3H), 6.52 (s, 1H), 6.12 (d, 1H), 4.39 (s, 2H), 3.46 (t, 2H),
2.91 (t, 2H).
Example 23. Synthesis of
2-(2,6-difluorophenyl)-4-((3,3-dimethyl-2,3-dihydrobenzofuran-6-yl)amino)-
-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-23
##STR00145## ##STR00146##
[0461] Synthesis of compound 23.2. To a solution of 23.1 (0.97 g
4.1 mmol, 1.0 eq.) in dry CH.sub.2Cl.sub.2 (6.0 mL) was added
anhydrous AlCl.sub.3 (1.66 g, 12.5 mmol, 3.0 eq) at 0.degree. C.
under argon atmosphere. The reaction mixture was stirred at
50.degree. C. for 16 hours. After completion of the reaction,
mixture was poured into diluted HCl to adjust pH to 4, and
extracted using CH.sub.2Cl.sub.2. Organic layer was washed with
brine and dried over sodium sulfate. Organic layer was concentrated
under reduced pressure and crude was purified by column
chromatography to afford pure 23.2 (0.76 g, 83.39%). MS (ES): m/z
219.1 [M+H].sup.+.
[0462] Synthesis of compound 23.3. To a solution of 23.2 (0.76 g,
3.57 mmol, 1.0 eq) in acetone (8 mL) were added K.sub.2CO.sub.3
(1.20 g, 8.71 mmol, 2.5 eq) and NaI (0.575 g, 3.83 mmol, 1.1 eq) at
room temperature and stirred for 20 minutes. To the mixture
3-Bromo-2-methylpropane (0.611 g, 4.53 mmol, 1.3 eq) was added and
reaction was heated at reflux temperature for 2 hours. After
completion of the reaction, mixture was diluted with water and
extracted with EtOAc. Organic layer was dried over sodium sulphate
and concentrate under reduced pressure at 45.degree. C. Crude was
purified by column chromatography to afford 23.3 (0.60 g, 63.25%).
MS (ES): m/z=273.1 [M+H].sup.+.
[0463] Synthesis of compound 23.4. To a solution of 23.3 (0.6 g,
2.20 mmol. 1.0 eq.) in dry DMF (15.0 ml) was added Et.sub.3NI (0.38
g, 2.4 mmol, 1.09 eq), Sodium formate (0.156 g, 2.40 mmol, 1.09 eq)
and NaOAc (0.44 g, 5.51 mmol, 2.5 eq). Reaction mixture was
degassed for 10 min and Palladium acetate (0.048 g, 0.22 mmol, 0.1
eq) was added and again reaction mixture degassed for 10 min.
Reaction mixture was heated at 70.degree. C. overnight. After
completion of the reaction, mixture was poured in cold water and
product was extracted with EtOAc. Organic layer was washed with
brine, dried over sodium sulphate. Solvent was removed under
reduced pressure and crude was purified by column chromatography to
afford pure 23.4 (0.34 g, 79.8%). MS (ES): m/z 194.3
[M+H].sup.+.
[0464] Synthesis of compound 23.5. To a suspension of Pd/C (0.034
g) in MeOH (10 mL) was added 23.4 (0.340 g, 1.76 mmol, 1.0 eq)
under nitrogen atmosphere. Above reaction mixture was purged with
Eh (gas) at room temperature for 1 hour. After completion of the
reaction, reaction mixture was filter through celite. Solvent was
removed under reduced pressure to afford 23.5 (0.250 g, 87.0%). MS
(ES): m/z 164.4 [M+H].sup.+.
[0465] Synthesis of 23.6. To a solution of 1.1 in DMSO (5.0 mL)
were added 24.5 (0.075 g, 0.46 mmol, 1.0 eq.) and DIPEA (0.149 mg,
1.16 mmol, 2.5 eq.) at room temperature. Reaction was heated at
70.degree. C. for 30 minutes. After completion of the reaction,
mixture was poured into water and extracted using EtOAc. Organic
layer was washed with by brine, dried over sodium sulfate and
concentrated under reduced pressure. Crude was purified by column
chromatography to afford pure 23.6 (0.151 g, 58.37%). MS (ES): m/z
559.6 [M+H].sup.+
[0466] Synthesis of compound I-23. A solution of 23.6 (0.151 g) in
TFA (6 mL) was heated at 70.degree. C. for 8 hrs. After completion
of the reaction, mixture was concentrated under reduced pressure at
45.degree. C. Obtained residue was poured in cold water,
neutralized with NaHCO.sub.3 and product was extracted with EtOAc.
Solvent was removed under reduced pressure to get crude which was
purified by preparative TLC to afford pure I-23 (34 mg, 30.8%). MS
(ES): m/z 409.4 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 8.99 (s, 1H), 8.89 (s, 1H), 7.62-7.58 (m, 1H), 7.40 (s,
1H), 7.30-7.26 (t, 2H), 7.17-7.15 (d, 1H), 7.10-7.08 (s, 1H), 4.47
(s, 2H), 4.21 (s, 2H), 1.27 (s, 6H).
Example 24. Synthesis of compound
4-((5-(2-oxa-7-azaspiro[3.5]nonan-7-yl)pyridin-2-yl)amino)-2-(2,6-difluor-
ophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-24
##STR00147##
[0468] Synthesis of compound 24.1. To a solution of 20.1 (0.6 g,
2.95 mmol, 1.0 eq) in 1,4-dioxane (10 ml) was added
2-oxa-7-azaspiro[3.5]nonane (0.641 g, 2.95 mmol, 1.0 eq) and
K.sub.2CO.sub.3 (1.2 g, 8.86 mmol, 3.0 eq). The reaction mixture
was degassed for 10 min. using argon, then Pd.sub.2(dba).sub.3
0.063 g, 0.29 mmol, 0.1 eq) and Xantphos (0.341 g, 0.59 mmol, 0.2
eq) were added, again degassed for 5 minutes. Reaction was stirred
at 120.degree. C. for 4 hours. After completion of the reaction,
reaction mixture was poured into water and product was extracted
with EtOAc. Organic layers were combined, dried over sodium
sulphate and concentrated under reduced pressure to obtain crude
which was purified to get pure 24.1 (0.210 g, 28.5%). MS (ES): m/z
250.2 [M+H].sup.+.
[0469] Synthesis of compound 24.2. A solution of 24.1 (0.210 g,
0.84 mmol, 1.0 eq) in MeOH (5 mL) was added 10% Pd/C (0.050 g)
under nitrogen atmosphere. It was purged with H.sub.2 gas for 1
hour. Reaction mixture was filtered through celite and obtained
filtrate was concentrated under reduced pressure to get crude 24.2
(0.130 g, 70.37%) which was used as such for the next step, MS
(ES): m/z 220.2 [M+H].sup.+.
[0470] Synthesis of compound I-24. To a solution of 24.3 (0.050 g,
0.15 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 1.2 (0.027 g,
0.12 mmol, 0.8 eq) and Sodium t-butoxide (0.029 g, 0.30 mmol, 2.0
eq). The reaction mixture was degassed for 10 minutes under argon
atmosphere, then
Chloro(2-dicyclohexylphosphino-2',4',6'-triisopropyl-1,1'-biphenyl)[2-(2'-
-amino-1,1'-biphenyl)]palladium(II) (0.022 g, 0.030 mmol, 0.2 eq)
was added, again degassed for 5 min. The reaction was stirred at
100.degree. C. for 8 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAC.
Organic layers were combined, dried over sodium sulphate and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to get pure I-24 (0.011 g,
10.4%). MS (ES): m/z 464.4 [M+H].sup.+. 1H NMR (CDCl.sub.3, 400
MHz): 9.41 (s, 1H), 8.54 (s, 1H), 8.04 (s, 1H), 7.43-7.30 (m, 2H),
7.06-7.01 (m, 2H), 6.92-6.90 (d, 1H), 4.54 (s, 2H), 4.49 (s, 4H),
3.09-3.06 (t, 4H), 2.05-2.03 (t, 4H).
Example 25. Synthesis of
4-((5-(l-oxa-7-azaspiro[3.5]nonan-7-yl)pyridin-2-yl)amino)-2-(2,6-difluor-
ophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-25
##STR00148## ##STR00149##
[0472] Synthesis of compound 25.2. To a solution of Trimethyl
sulphoxonium iodide (22.09 g, 100.4 mmol, 4.0 eq) in t-butanol (150
mL) was added potassium tert-butoxide (11.24 g, 100.4 mmol, 4.0
eq). Reaction was stirred at 50.degree. C. for 1 h. Then 25.1 (5 g,
25 mmol, 1 eq) was added at 50.degree. C. and allowed to stir for 2
days. After completion of the reaction, mixture was concentrated
under reduced pressure. Water was added to reaction mixture and
product was extracted with Et.sub.2O. Organic layer was combined
and dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude which was purified by tituration in hexane
to give pure 25.2 (3.6 g, 63.11%). MS (ES): m/z 227.30
[M+H].sup.+.
[0473] Synthesis of compound 25.3. To compound 25.2 (3.6 g, 15.78
mmol, 1.0 eq) TFA was added. The reaction was stirred for 2 h.
After completion of the reaction, mixture was concentrated under
reduced pressure. The reaction mixture was neutralized using
amberlyst resin in methanol. Reaction mixture was concentrated
under reduced pressure to get crude 25.3 (2.0 g, 99.3%) which was
used as such for the next step, MS (ES): m/z 127.19
[M+H].sup.+.
[0474] Synthesis of compound 25.4. To a solution of 20.1 (2.0 g,
9.85 mmol, 1 eq.) in DMSO (18 ml) was added compound 25.3 (1.87 g,
14.77 mmol, 1.5 eq), tetra butyl ammonium iodide (0.363 g, 0.98
mmol, 0.1 eq), and K.sub.2CO.sub.3 (4.078 g, 29.55 mmol, 3.0 eq).
Reaction mixture was heated at 90.degree. C. for 2 h. After
completion of the reaction, mixture was poured into water to give
solid product. The product was extracted with EtOAC. Organic layers
were combined and dried over sodium sulphate and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish 25.4 (0.37 g, 10.1%). MS (ES): m/z 249.27
[M+H].sup.+.
[0475] Synthesis of compound 199.5. To a solution of 199.4 (0.370
g, 1.48 mmol, 1.0 eq) in MeOH (15 mL) was added 10% Pd/C (0.060 g)
under nitrogen atmosphere. It was purged with hydrogen for 1 hours.
Reaction mixture was filtered through celite and obtained filtrate
was concentrated under reduced pressure to get crude 199.5 (0.263
g, 98.88%) which was used as such for the next step. MS (ES): m/z
219.29 [M+H].sup.+.
[0476] Synthesis of compound 24.3. Compound 4.4 (1.0 g, 2.32 mmol,
1.0 eq) was dissolved in H Br/HOAc (10 ml) and stirred at room
temperature for 4 h. After completion of the reaction, mixture was
poured into water and basified with saturated bicarbonate solution
and extracted with EtOAc. Organic layers were combined, dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to get pure 24.3
(0.630 g, 83.49%). MS (ES): m/z 325.11 [M+H].sup.+.
[0477] Synthesis of compound I-25. To a solution of compound 24.3
(0.250 g, 0.768 mmol, 1.0 eq.) in 1,4-dioxane were added compound
25.5 (0.168 g, 0.768 mmol, 1.0 eq) and K.sub.3PO.sub.4 (0.326 g,
1.53 mmol, 2.0 eq). The reaction mixture was degassed for 15
minutes. Pre-catalyst Xantphos (0.111 g, 0.153 mmol, 0.2 eq) was
added to the reaction mixture and reaction was further degassed for
10 minutes. The reaction mixture was heated at 100.degree. C. for
20 minutes. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAC. Organic layers
were combined, dried over sodium sulphate and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography and preparative HPLC to furnish I-25 (0.007 g,
2.92%). MS (ES): m/z 463.49 [M+H].sup.+, .sup.1H NMR (DMSO-d6, 400
MHz): 9.48 (s, 1H), 8.80 (s, 1H), 8.36 (s, 1H), 8.02-8.01 (d, 2H),
7.59-7.54 (m, 1H), 7.46-7.43 (dd, 1H), 7.27-7.23 (t, 3H), 7.10-7.08
(d, 1H), 5.50 (s, 1H), 4.48-4.46 (t, 1H), 4.40 (s, 2H), 3.60 (s,
2H), 3.52-3.44 (m, 2H), 3.31-3.28 (m, 2H), 2.16 (s, 4H).
Example 26. Synthesis of
2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidi-
n-4-yl)amino)phenyl)-N-ethyl-4,4,4-trifluoro-2-hydroxybutanamide,
I-26
##STR00150##
[0479] Synthesis of compound 26.1. To a solution of 1.1 (0.06 g,
0.137 mmol, 1.0 eq) in Butanol (3 mL) was added
2-(4-aminophenyl)-N-ethyl-3-fluoro-2-hydroxypropanamide compound
with 113,311-prop-1-yne (1:1) (0.038 g, 0.137 mmol, 1.0 eq) and
DIPEA (0.07 ml, 0.411 mmol, 3.0 eq). The reaction was then heated
at 85.degree. C. for 2 h. After completion of the reaction, mixture
was poured in water and product was extracted with ethyl acetate.
Organic layers were combined, dried over sodium sulphate and
concentrated under reduced pressure to obtain crude 26.1 which was
used in next step without further purification. 1.1 (0.07 g,
64.3%). MS (ES): m/z 671.6 [M+H].sup.+.
[0480] Synthesis of compound I-26. A solution of 26.1 (0.12 g,
0.214 mmol, 1.0 eq) in HBr/HOAc (3 mL) was stirred at room
temperature for 2 h. Upon completion reaction was quenched with
water and extracted with EtOAc. Organic layer was washed with satd.
NaHCO.sub.3 solution. Combined organic layers were washed with
brine, dried over sodium sulphate and concentrated under reduced
pressure to afford crude, which was purified by column
chromatography to furnish I-26 (0.053 g, 97.5%). MS (ES): m/z 521.6
[M+H].sup.+. .sup.1H NMR (400 MHz, CDCl.sub.3): .delta. 8.82 (s,
1H), 7.83-7.81 (d, 2H), 7.60-7.57 (d, 2H), 7.48-7.41 (m, 1H),
7.08-7.02 (m, 2H), 6.82-6.79 (m, 1H), 6.25 (s, 1H), 4.56 (s, 2H),
3.51-3.16 (m, 4H), 1.14-1.11 (t, 3H).
Example 27. Synthesis of
(S)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-N-ethyl-4,4,4-trifluoro-2-hydroxybutanamide,
I-27
##STR00151##
[0482] Compound I-27 was prepared by chiral separation of compound
I-26. MS (ES): m/z 521.3 [M+H].sup.+, .sup.1H NMR (400 MHz,
CDCl.sub.3): .delta. 8.78 (s, 1H), 7.84-7.81 (d, 2H), 7.59-7.57 (d,
2H), 7.45-7.42 (m, 1H), 7.07-7.03 (m, 2H), 6.83-6.80 (m, 1H), 6.33
(s, 1H), 4.54 (s, 2H), 3.44-3.17 (m, 3H), 2.87-2.81 (m, 1H),
1.14-1.11 (t, 3H).
Example 28. Synthesis of
(R)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-N-ethyl-4,4,4-trifluoro-2-hydroxybutanamide,
I-28
##STR00152##
[0484] Compound I-28 was prepared by chiral separation of compound
I-26. MS (ES): m/z 521.3 [M+H].sup.+, .sup.1H NMR (400 MHz,
CDCl.sub.3): .delta. 8.78 (s, 1H), 7.84-7.81 (d, 2H), 7.59-7.57 (d,
2H), 7.45-7.42 (m, 1H), 7.07-7.03 (m, 2H), 6.83-6.80 (m, 1H), 6.33
(s, 1H), 4.54 (s, 2H), 3.44-3.17 (m, 3H), 2.87-2.81 (m, 1H),
1.14-1.11 (t, H).
Example 29. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(2,2,2-trifluoro-1-hydroxy-ethyl)phenyl)amin-
o)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-29
##STR00153## ##STR00154##
[0486] Synthesis of compound 29.2. To a solution of 29.1 (1 g, 6.6
mmol, 1.0 eq) in THF (3 ml) was added trimethyl (trifluoromethyl)
silane (1.41 g, 9.9 mmol, 1.5 eq) at 0.degree. C. Tetrabutyl
ammonium fluoride (0.132 ml, 0.13 mmol, 0.02 eq) was added at
0.degree. C. and allowed to stir for 10 minutes and then at room
temperature for 2 hours. Reaction mixture was poured into 3 N HCl
and product was extracted with CH.sub.2Cl.sub.2. Organic layers
were combined, dried over sodium sulphate and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to get pure 29.2 (1.1 g, 75.17%). MS (ES): m/z
221.14 [M+H].sup.+.
[0487] Synthesis of compound 29.3. To a solution of 29.2 (1.1 g,
5.0 mmol, 1.0 eq) in MeOH (10 ml) was added 10% Pd/C (0.2 g) under
nitrogen atmosphere. It was purged with hydrogen for 1 hour.
Reaction mixture was filtered through celite and obtained filtrate
was concentrated under reduced pressure to get crude 29.3 (0.820 g,
86.2%) which was used as such for the next step, MS (ES): m/z
191.15 [M+H].sup.+.
[0488] Synthesis of compound 29.4. To a solution of 1.1 (0.300 g,
0.697 mmol, 1.0 eq) in n-Butanol (4 ml) was added 29.3 (0.146 g,
0.767 mmol, 1.1 eq) and DIPEA (0.27 g, 2.093 mmol, 3.0 eq).
Reaction was stirred at 110.degree. C. for 2 hours. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 29.4 (0.320 g, 78.53%). MS (ES): m/z 586.52
[M+H].sup.+.
[0489] Synthesis of compound I-29. Compound 29.4 (0.320 g, 0.545
mmol, 1.0 eq) was dissolved in HBr/HOAc (5 ml) and stirred at room
temperature for 2 hours. After completion of the reaction, mixture
was poured into water, basified with satd. NaHCO.sub.3 solution and
extracted with EtOAc. Organic layers were combined, dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish I-26
(0.125 g, 52.52%). MS (ES): m/z 436.34 [M+H].sup.+, .sup.1H NMR
(MeOD, 400 MHz): 7.87-7.85 (d, 2H), 7.60-7.52 (m, 1H), 7.50-7.48
(d, 2H), 7.18-7.14 (m, 2H), 5.05-4.99 (s, 2H), 4.52 (s, 1H).
Example 30. Synthesis of
(S)-2-(2,6-difluorophenyl)-4-((4-(2,2,2-trifluoro-1-hydroxyethyl)phenyl)a-
mino)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-30
##STR00155##
[0491] Compound I-30 was prepared by chiral separation of compound
I-29. MS (ES): m/z 436.34 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 7.87-7.85 (d, 2H), 7.58-7.53 (m, 3H), 7.50-7.48 (d, 2H),
7.18-7.14 (m, 2H), 4.52 (s, 1H).
Example 31. Synthesis of
(R)-2-(2,6-difluorophenyl)-4-((4-(2,2,2-trifluoro-1-hydroxyethyl)phenyl)a-
mino)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-31
##STR00156##
[0493] Compound I-31 was prepared by chiral separation of compound
I-29. MS (ES): m/z 436.34 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 7.87-7.85 (d, 2H), 7.60-7.53 (m, 1H), 7.50-7.48 (d, 2H),
7.18-7.14 (m, 2H), 4.64 (s, 2H), 4.52 (s, 1H).
Example 32. Synthesis of
2-amino-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]-
pyrimidin-4-yl)amino)phenyl)propanoic acid, I-32
##STR00157##
[0495] Synthesis of compound 32.1. To a solution of 1.1 (0.073 g,
0.170 mmol, 1.0 eq) in Butanol (5 mL) were added methyl
2-(4-aminophenyl)-2-((tert-butoxycarbonyl)-amino)propionate (0.050
g, 0.170 mmol, 1.0 eq) and DIPEA (0.09 ml, 0.510 mmol, 3.0 eq). The
reaction was stirred at 100.degree. C. for 2 hours. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude 32.1 (0.070 g, 60.04%) which was used in next step
without further purification. MS (ES): m/z 690.72 [M+H].sup.+.
[0496] Synthesis of compound 32.2. Solution of 32.1 (0.070 g, 0.106
mmol, 1.0 eq) in HBr/HOAc (3 mL) was stirred at room temperature
for 2 hr. Upon completion, water was added and product was
extracted with EtOAc. Organic layers were washed with satd.
NaHCO.sub.3 solution. Combined organic layers were washed with
brine, dried over sodium sulphate and concentrated under reduced
pressure afford crude, which was purified by column chromatography
to furnish 32.2 (0.030 g, 67.27%). MS (ES): m/z 440.42
[M+H].sup.+.
[0497] Synthesis of compound I-32. Compound 32.2 (0.030 g, 0.068
mmol, 1.0 eq) was dissolved in MeOH (2 ml). 2N NaOH (0.090 ml,
0.204 mmol, 3.0 eq) was added and stirred at room temperature for 1
hr. After completion of reaction, mixture was concentrated under
reduced pressure. Crude compound was purified by prep HPLC to get
pure I-32 (0.008 g, 24.4%). MS (ES): m/z 425.40 [M+H].sup.+,
.sup.1H NMR (MeOD, 400 MHz): 7.88-7.85 (m, 2H), 7.58-7.53 (m, 3H),
7.16-7.12 (m, 2H), 4.51 (s, 2H), 1.88 (s, 3H).
Example 33. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxy-propan-2-yl)pheny-
l)amino)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-33
##STR00158##
[0499] Synthesis of compound 33.2. To a solution of 33.1 (1 g, 6
mmol, 1.0 eq) in THF (15 ml) was added trimethyl (trifluoromethyl)
silane (1.3 g, 9 mmol, 1.5 eq) and cooled at 0.degree. C.
Tetrabutyl ammonium fluoride (0.132 ml, 0.13 mmol, 0.02 eq) was
added at 0.degree. C. and allowed to stir for 10 minutes and then
at room temperature for 2 hours. Reaction mixture was poured in 3 N
HCl and product was extracted with EtOAc. Organic layers were
combined, dried over sodium sulphate and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography to get pure 33.2 (1 g, 70.2%). MS (ES): m/z 235.16
[M+H].sup.+.
[0500] Synthesis of compound 33.3. To a solution of 33.2 (0.3 g,
1.2 mmol, 1.0 eq) in MeOH (10 ml) was added 10% Pd/C (0.2 g) under
nitrogen atmosphere. It was purged with hydrogen for 1 hour.
Reaction mixture was filtered through celite and obtained filtrate
was concentrated under reduced pressure to get crude 33.3 (0.250 g,
95.51%) which was used as such for the next step, MS (ES): m/z
205.18 [M+H].sup.+.
[0501] Synthesis of compound 33.4. To a solution of 1.1 (0.100 g,
0.23 mmol, 1.0 eq) in n-Butanol (5 ml) was added 33.3 (0.047 g,
0.23 mmol, 1.0 eq) and DIPEA (0.089 g, 0.69 mmol, 3.0 eq). Reaction
mixture was stirred at 90.degree. C. for 3 hours. After completion
of the reaction, n-butanol was removed under high vacuum to obtain
crude material 33.4 (0.100 g, 71.99%). MS (ES): m/z 600.18
[M+H].sup.+.
[0502] Synthesis of compound I-33. Compound 33.4 (0.100 g, 0.166
mmol, 1.0 eq) was dissolved in HBr/HOAc (3 ml) and stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water and basified with satd. NaHCO.sub.3 and
product was extracted with EtOAc. Organic layers were combined,
dried over sodium sulphate and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to get
pure I-33 (0.050 g, 66.7%). MS (ES): m/z 450.37 [M+H].sup.+,
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): 9.13 (s, 1H), 8.92 (s, 1H),
7.80-7.78 (d, 2H), 7.56-7.54 (m, 3H), 7.29-7.27 (m, 2H), 6.55 (d,
1H), 4.49 (s, 2H), 1.67 (s, 3H).
Example 34. Synthesis of
(S)-2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxy-propan-2-yl)p-
henyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, I-34
##STR00159##
[0504] Compound I-34 was prepared by chiral separation of compound
I-33 MS (ES): m/z 450.37 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 7.85-7.80 (m, 2H), 7.63-7.52 (m, 3H), 7.18-7.13 (m, 2H),
4.52 (s, 2H), 1.73 (s, 3H).
Example 35. Synthesis of
(R)-2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxy-propan-2-yl)p-
henyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one I-35
##STR00160##
[0506] Compound I-35 was prepared by chiral separation of compound
I-33 MS (ES): m/z 450.37 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 7.85-7.83 (m, 2H), 7.61-7.54 (m, 3H), 7.18-7.14 (m, 2H),
4.52 (s, 2H), 1.73 (s, 3H).
Example 36. Synthesis of
4-((5-(l-oxa-6-azaspiro[3.5]nonan-6-yl)pyridin-2-yl)amino)-2-(2,6-difluor-
ophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-36
##STR00161##
[0508] Synthesis of compound 36.1. To a solution of 20.1 (0.400 g,
1.97 mmol, 1.0 eq) in 1,4-dioxane (10 mL) were added
1-oxa-6-azaspiro[3.5]nonane (0.406 g, 2.36 mmol, 1.2 eq) and
Cs.sub.2CO.sub.3 (1.92 g, 5.91 mmol, 3.0 eq). The reaction mixture
was degassed for 10 min. using argon, then Pd.sub.2(dba).sub.3
(0.180 g, 0.197 mmol, 0.1 eq) and
2-Dicyclohexylphosphino-2'-(N,N-dimethylamino)biphenyl (0.154 g,
0.394 mmol, 0.2 eq) were added, and again degassed for 5 min.
Reaction was stirred at 110.degree. C. for 4 h. After completion of
the reaction, mixture was poured into water and product was
extracted with EtOAc. Organic layers were combined and dried over
sodium sulphate and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 36.1
(0.36 g, 73.3%). MS (ES): m/z 250.6 [M+H].sup.+.
[0509] Synthesis of compound 36.2. To a solution of 36.1 (0.360 g,
1.44 mmol, 1.0 eq) in MeOH (5 mL) was added 10% Pd/C (0.350 g)
under nitrogen atmosphere. It was purged with hydrogen for 1 hour.
Reaction mixture was filtered through celite and obtained filtrate
was concentrated under reduced pressure to get crude 36.2 (0.300 g,
94.73%) which was used as such for the next step, MS (ES): m/z
220.23 [M+H].sup.+.
[0510] Synthesis of compound I-36. To a solution of 24.3 (0.400 g,
1.23 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 36.2 (0.269 g,
1.23 mmol, 1.0 eq) and K.sub.3PO.sub.4 (0.52 g, 2.46 mmol, 2.0 eq).
The reaction mixture was degassed for 10 min. using argon, then
chloro(2-dicyclohexylphosphino-2',4',6'-triisopropyl-1,1'-biphenyl)[2-(2--
aminoethyl)phenyl)]palladium(II) (0.182 g, 0.25 mmol, 0.2 eq) was
added, again degassed for 5 minutes. Reaction was then stirred at
100.degree. C. for 1 hour. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish I-36 (0.163 g, 28.6%).
MS (ES): m/z 463.6 [M+H].sup.+. .sup.1H NMR (400 MHz,
DMSO-d.sub.6): .delta. 9.51 (s, 1H), 8.81 (s, 1H), 8.39 (s, 1H),
8.09 (s, 1H), 7.64-7.49 (m, 2H), 7.34-7.23 (m, 2H), 7.10-7.08 (d,
1H), 4.48-4.39 (m, 1H), 4.38 (s, 2H), 3.43-3.40 (m, 1H), 3.12-3.01
(m, 2H), 2.90-2.86 (m, 1H), 2.43-2.28 (m, 3H), 1.87-1.83 (m, 1H),
1.73-1.62 (m, 2H), 1.56-1.50 (m, 1H).
Example 37. Synthesis of
(R)-4-((5-(1-oxa-6-azaspiro[3.5]nonan-6-yl)pyridin-2-yl)amino)-2-(2,6-dif-
luorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-37
##STR00162##
[0512] Compound I-37 was prepared by chiral separation of compound
I-36. MS (ES): m/z 463.3 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 8.45 (s, 1H), 8.10 (s, 1H), 7.56-7.50 (m, 2H), 7.16-7.12
(m, 2H), 7.06-7.04 (d, 1H), 4.65-4.55 (m, 2H), 4.47 (s, 2H),
3.33-3.31 (m, 2H), 3.09-3.07 (m, 2H), 2.55-2.45 (m, 2H), 1.91-1.86
(m, 2H), 1.70-1.66 (m, 2H).
Example 38. Synthesis of
(S)-4-((5-(l-oxa-6-azaspiro[3.5]nonan-6-yl)pyridin-2-yl)amino)-2-(2,6-dif-
luorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-38
##STR00163##
[0514] Compound I-38 was prepared by chiral separation of compound
I-36. MS (ES): m/z 463.3 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 8.45 (s, 1H), 8.10 (s, 1H), 7.56-7.50 (m, 2H), 7.16-7.12
(m, 2H), 7.06-7.04 (d, 1H), 4.65-4.55 (m, 2H), 4.47 (s, 2H),
3.33-3.31 (m, 2H), 3.09-3.07 (m, 2H), 2.55-2.45 (m, 2H), 1.91-1.86
(m, 2H), 1.70-1.66 (m, 2H).
Example 39. Synthesis of
2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidi-
n-4-yl)amino)phenyl)-2,4-dimethyl-2H-benzo[b][1,4]oxazin-3(4H)-one,
I-39
##STR00164## ##STR00165##
[0516] Synthesis of compound 39.2. To a solution of 39.1 (5.0 g,
23.92 mmol, 1.0 eq) in THF (50 ml) was added Mel (3.73 g, 26.31
mmol, 1.1 eq.) and 18-crown-6 (1.57 g, 59.80 mmol, 0.25 eq.). The
reaction mixture was cooled to -78.degree. C. and potassium
t-butoxide (2.94 g, 26.31 mmol, 1.1 eq) was added. Reaction was
stirred at room temperature for 6 hours. After completion of
reaction, NH.sub.4Cl was added at -78.degree. C. Product was
extracted with EtOAc. Organic layers were combined and dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 39.2
(4.5 g, 84.34%). MS (ES): m/z 223.23 [M+H].sup.+.
[0517] Synthesis of compound 39.3. To a solution of compound 39.2
(4.5 g, 20.17 mmol, 1.0 eq) in ethanol (40 ml) was added NaOH
(1.614 g, 40.35 mmol, 2 eq.) and water (10 ml). Reaction was
stirred at room temperature for 2 hours. After completion of the
reaction, solvent was evaporated under reduced pressure and water
was added. Dilute HCl was added to acidify the reaction mixture.
The product was extracted with ethyl acetate. Organic layers were
combined and dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish 39.3 (3.1 g, 78.8%). MS (ES): m/z 195.17
[M+H].sup.+.
[0518] Synthesis of compound 39.4. To a solution of
2-fluoro-N-methylaniline (1.98 g, 15.89 mmol, 1 eq.) in
CH.sub.2Cl.sub.2 (50 ml) was added compound 39.3 (3.1 g, 15.8 mmol,
1 eq). Further DMAP (0.386 g, 3.168 mmol, 0.2 eq) was added and the
reaction was cooled at 0.degree. C. Dicyclohexyl carbodiimide (3.91
g, 19.00 mmol, 1.2 eq) was added at 0.degree. C. and the reaction
was stirred at room temperature for 24 hours. After completion of
the reaction, mixture was filtered through celite and the filtrate
was concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 39.4 (0.330 g,
10.76%). MS (ES): m/z 302.31 [M+H].sup.+.
[0519] Synthesis of compound 39.5. To a solution of compound 39.4
(0.280 g, 0.927 mmol, 1 eq.) in DMF (10 ml) was added copper (II)
chloride (0.273 g, 2.039 mmol, 2.2 eq.) and sodium t-butoxide (0.45
g, 4.64 mmol, 5.0 eq.) Reaction was stirred at 80.degree. C. for 24
hours. After completion of the reaction, mixture was poured into
water and brine solution was added to it. Product was extracted
with EtOAc. Organic layers were combined, dried over sodium
sulphate and concentrated under reduced pressure to obtain crude
which was further purified by column chromatography to get pure
39.5 (0.069 g, 24.9%). MS (ES): m/z 298.30 [M+H].sup.+.
[0520] Synthesis of compound 39.6. To a Pd/C (20 mg) suspension in
methanol (2 ml) was added 39.5 (0.069 mg, 0.231 mmol, 1.0 eq).
Hydrogen gas was purged into the reaction mixture for 2 hours at
ambient temperature. After completion of the reaction, mixture was
filtered through celite and washed with methanol. The filtrate was
evaporated under reduced pressure to obtain crude which was
purified by column chromatography to get pure 9.5 (0.059 g,
95.06%). MS (ES): m/z 268.32 [M+H].sup.+.
[0521] Synthesis of compound 39.7. To a solution of 1.1 (0.100 g,
0.234 mmol, 1.0 eq.) in n-butanol (1 mL) were added compound 39.6
(0.059 g, 0.234 mmol, 1.0 eq.) and DIPEA (0.075 g, 0.58 mmol, 2.5
eq.). Reaction was stirred at 80.degree. C. for 3 hours. After
completion of the reaction, mixture was poured into water. The
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to get
pure 221.6 (0.130 g, 84.58%). MS (ES): m/z 663.68 [M+H].sup.+.
[0522] Synthesis of compound I-39. Compound 39.7 (0.130 g, 0.195
mmol, 1.0 eq) was dissolved in HBr/HOAc (2 mL) and stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water and basifled with satd. NaHCO.sub.3 and
extracted with EtOAc Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column and preparative HPLC to furnish
I-39 (0.060 g, 59.65%). MS (ES): m/z 513.50 [M+H].sup.+, .sup.1H
NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.05 (s, 1H), 8.91 (s, 1H),
7.71-7.69 (d, 2H), 7.63-7.59 (m, 1H), 7.30-7.25 (m, 4H), 7.13-7.11
(m, 1H), 7.05-7.03 (m, 1H), 6.99-6.95 (m, 2H), 4.46 (s, 2H) 1.77
(s, 3H).
Example 40. Synthesis of
(S)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-2,4-dimethyl-2H-benzo[b][1,4]oxazin-3(4H)-one,
I-40
##STR00166##
[0524] Compound I-40 was prepared by chiral separation of compound
I-39. MS (ES): m/z 513.50 [M+H].sup.+, .sup.1H NMR (DMSO-d.sub.6,
400 MHz): .delta. 9.05 (s, 1H), 8.90 (s, 1H), 7.71-7.69 (d, 2H),
7.63-7.59 (m, 1H), 7.30-7.25 (m, 4H), 7.13-7.11 (m, 1H), 7.05-7.03
(m, 1H), 6.99-6.95 (m, 2H), 4.45 (s, 2H) 1.77 (s, 3H).
Example 41. Synthesis of
(R)-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-d]pyri-
midin-4-yl)amino)phenyl)-2,4-dimethyl-2H-benzo[b][1,4]oxazin-3(4H)-one,
I-41
##STR00167##
[0526] Compound I-41 was prepared by chiral separation of compound
I-39. MS (ES): m/z 513.50 [M+H].sup.+, .sup.1H NMR (DMSO-d.sub.6,
400 MHz): 9.05 (s, 1H), 8.90 (s, 1H), 7.71-7.69 (d, 2H), 7.62-7.59
(m, 1H), 7.30-7.25 (m, 4H), 7.13-7.03 (m, 2H), 6.99-6.95 (m, 2H),
4.46 (s, 2H) 1.77 (s, 3H).
Example 42. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxypropan-2-yl)phenyl-
)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-42
##STR00168##
[0528] Synthesis of compound 42.1. To a solution of 4.4 (0.150 g,
0.348 mmol, 1.0 eq) in 1,4-dioxane (8 mL) was added 33.3 (0.071 g,
0.348 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.144 g, 1.04 mmol, 3 eq).
The reaction mixture was degassed for 10 min. using argon, then
Pd.sub.2(dba).sub.3 (0.031 g, 0.034 mmol, 0.1 eq) and Xantphos
(0.040 g, 0.069 mmol, 0.2 eq) were added, and again degassed for 5
minutes. Reaction was stirred at 90.degree. C. for 3 hours. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 42.1 (0.120 g, 57.5%). MS (ES): m/z 599.46 [M+H].sup.+.
[0529] Synthesis of compound I-42. Solution of 42.1 (0.120 g, 0.200
mmol, 1.0 eq) in HBr/HOAc (3 mL) was stirred at ambient temperature
for 1 h. After completion of reaction pH was adjusted to 7 by
addition of NaHCO.sub.3 solution. The product was extracted with
EtOAc. Combined organic layers were washed with brine, dried over
sodium sulphate and concentrated under reduced pressure to afford
crude, which was purified by column chromatography to furnish I-42
(0.065 g, 72.3%). MS (ES): m/z 449.38 [M+H].sup.+. NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.07 (s, 1H), 8.75 (s, 1H),
7.61-7.59 (d, 2H), 7.57-7.49 (m, 1H), 7.40-7.38 (d, 2H), 7.23-7.18
(m, 2H), 7.11 (s, 1H), 6.59 (s, 1H), 4.40 (s, 2H), 1.68 (s,
3H).
Example 43. Synthesis of
(S)-2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxypropan-2-yl)ph-
enyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-43
##STR00169##
[0531] Compound I-43 was prepared by chiral separation of I-42. MS
(ES): m/z 449.38 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 9.15 (s, 1H), 8.78 (s, 1H), 7.62-7.60 (d, 2H), 7.56-7.51
(m, 1H), 7.41-7.39 (d, 2H), 7.24-7.20 (m, 2H), 7.12 (s, 1H), 6.60
(s, 1H), 4.24 (s, 2H), 1.68 (s, 3H).
Example 44. Synthesis of
(R)-2-(2,6-difluorophenyl)-4-((4-(1,1,1-trifluoro-2-hydroxy-propan-2-yl)p-
henyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-44
##STR00170##
[0533] Compound I-44 was prepared by chiral separation of I-42. MS
(ES): m/z 449.38 [M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6):
.delta. 9.15 (s, 1H), 8.77 (s, 1H), 7.62-7.59 (d, 2H), 7.56-7.51
(m, 1H), 7.41-7.38 (d, 2H), 7.24-7.19 (m, 2H), 7.12 (s, 1H), 6.59
(s, 1H), 4.42 (s, 2H), 1.68 (s, 3H).
Example 45. Synthesis of
(S)-2-amino-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,-
4-d]pyrimidin-4-yl)amino)phenyl)propanoic acid hydrochloride,
I-45
##STR00171##
[0535] Synthesis of compound 45.2. To a solution of 45.1 (0.500 g,
1.23 mmol, 1.0 eq) in MeOH (10 ml) was added 10% Pd/C (0.2 g) under
nitrogen. It was purged with H.sub.2 gas at ambient temperature for
24 h. Reaction mixture was filtered through celite, washed with
methanol and obtained filtrate was concentrated under reduced
pressure to get crude which was purified by column chromatography
to furnish 232.1 (0.26 g, 71.2%) MS (ES): m/z 294.35
[M+H].sup.+.
[0536] Synthesis of compound 45.3. Compound 45.2 was prepared by
chiral separation of 232.1 (0.085 g), MS (ES): m/z 294.35
[M+H].sup.+, .sup.1H NMR (400 MHz, DMSO-d.sub.6): .delta. 7.07-7.04
(d, 2H), 6.50-6.48 (d, 2H), 5.10 (s, 2H), 3.55 (s, 3H), 1.67 (s,
3H), 1.36 (s, 9H).
[0537] Synthesis of compound 45.4. To a solution of 1.1 (0.120 g,
0.278 mmol, 1.0 eq) in n-butanol (5 ml) were added 45.3 (0.081 g,
0.278 mmol, 1.0 eq) and DIPEA (0.107 g, 0.835 mmol, 3.0 eq).
Reaction was stirred at 100.degree. C. for 2 h. After completion of
the reaction, solvents were removed under reduced pressure to
obtain crude 45.4 0.120 g, 62.61%). MS (ES): m/z 689.72
[M+H].sup.+.
[0538] Synthesis of compound 45.5. Compound 45.4 (0.120 g, 0.173
mmol, 1.0 eq) was dissolved in HBr/HOAc (2 mL) and stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water and basified with satd. NaHCO.sub.3 solution
and extracted with EtOAc. Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to get pure 45.5
(0.055 g, 71.9%). MS (ES): m/z 439.42 [M+H].sup.+.
[0539] Synthesis of compound I-45. Compound 45.5 (0.055 g, 0.125
mmol, 1.0 eq) was dissolved in MeOH (2 mL) at 0.degree. C. 2N NaOH
solution (0.165 ml, 0.375 mmol, 3.0 eq.) was added at same
temperature. Reaction mixture was stirred at room temperature for 1
h. After completion of the reaction, mixture was acidified by using
solution of HCl in dioxane. The solvent was removed under reduced
pressure to obtain crude which was purified by preparative HPLC to
furnish I-45 (0.025 g, 46.9%). MS (ES): m/z 425.40 [M+H].sup.+; NMR
(400 MHz, MeOD): .delta. 8.18 (s, 1H), 7.89-7.86 (d, 2H), 7.60-7.54
(m, 3H), 7.17-7.11 (m, 2H), 4.51 (s, 2H), 1.89 (s, H).
Example 46. Synthesis of
(R)-2-amino-2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,-
4-d]pyrimidin-4-yl)amino)phenyl)propanoic acid hydro-chloride,
I-46
##STR00172##
[0541] Synthesis of compound 46.1. Compound 46.1 was prepared by
chiral separation of 45.2. MS (ES): m/z 294.35 [M+H].sup.+, .sup.1H
NMR (400 MHz, DMSO-d.sub.6): .delta. 7.06-7.04 (d, 2H), 6.50-6.48
(d, 2H), 5.10 (s, 2H), 3.55 (s, 3H), 1.67 (s, 3H), 1.36 (s,
9H).
[0542] Synthesis of compound 46.2. Compound 46.2 was prepared using
equivalent procedure as described for synthesis of compound 45.4.
MS (ES): m/z 689.72 [M+H].sup.+.
[0543] Synthesis of compound 46.3. Compound 46.3 was prepared using
the same procedure as described for preparation of 45.5. MS (ES):
m/z 439.42 [M+H].sup.+.
[0544] Synthesis of compound I-46. Compound I-46 was prepared using
the same procedure as described for preparation of compound I-45.
MS (ES): m/z 425.40 [M+H].sup.+, .sup.1H NMR (400 MHz, MeOD):
.delta. 8.30 (s, 1H), 7.88-7.86 (d, 2H), 7.58-7.52 (m, 3H),
7.16-7.12 (m, 2H), 4.51 (s, 2H), 1.89 (s, 3H).
Example 47. Synthesis of
4-((5-(7-oxa-4-azaspiro[2.5]octan-4-yl)pyridin-2-yl)amino)-2-(2,6-difluor-
ophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-47
##STR00173##
[0546] Synthesis of compound 47.1. To a solution of 20.1 (0.120 g,
0.591 mmol, 1.0 eq) in 1,4-dioxane (3 ml) were added
7-oxa-4-azaspiro[2.5]octane (0.088 g, 0.591 mmol, 1.0 eq) and
sodium Tert-butoxide (0.17 g, 1.77 mmol, 3.0 eq). The reaction
mixture was degassed for 10 min. under argon atmosphere, then
Pd.sub.2(dba).sub.3 (0.054 g, 0.059 mmol, 0.1 eq) and
2-Dicylcohexylphosphino-2'-(N,N-dimethylamino)-biphenyl(0.046 g,
0.118 mmol, 0.2 eq) were added, and again degassed for 5 minutes.
The reaction was stirred at 100.degree. C. for 3 h. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 47.1 (0.059 g, 42.43%). MS (ES): m/z 235.24
[M+H].sup.+.
[0547] Synthesis of compound 47.2. To a solution of 47.1 (0.059 g,
0.25 mmol, 1.0 eq) in MeOH (8 mL) was added 10% Pd/C (0.06 g) under
nitrogen atmosphere. It was purged with H.sub.2 gas for 1 hour.
Reaction mixture was filtered through celite and obtained filtrate
was concentrated under reduced pressure to get crude 47.2 (0.045 g,
87.41%) which was used as such for the next step, MS (ES): m/z
205.26 [M+H].sup.+.
[0548] Synthesis of compound 47.3. To a solution of 4.4 (0.100 g,
0.232 mmol, 1.0 eq) in 1,4-dioxane (3 ml) was added 47.2 (0.045 g,
0.232 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.080 g, 0.581 mmol, 2.5
eq). The reaction mixture was degassed for 10 min. under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq)
and Xantphos (0.026 g, 0.046 mmol, 0.2 eq) were added, and again
degassed for 5 min. Reaction was stirred at 100.degree. C. for 3
hours. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish 47.3 (0.075 g, 53.89%). MS(ES): m/z
599.64 [M+H].sup.+.
[0549] Synthesis of compound I-47. Compound 47.3 (0.075 g, 0.125
mmol, 1.0 eq) was dissolved in TFA (5 mL) and heated at 70.degree.
C. for 6 hours. After completion of the reaction, trifluoroacetic
acid was removed under reduced pressure. Water was added to
reaction mixture, basified with satd. NaHCO.sub.3 and extracted
with EtOAc. Organic layers were combined, dried over sodium
sulphate and concentrated under reduced pressure to obtain crude
which was purified by column chromatography to furnish I-47 (0.032
g, 56.9%). MS (ES): m/z 449.46 [M+H].sup.+, .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.53 (s, 1H), 8.82 (s, 1H), 8.40
(s, 1H), 8.12 (s, 1H), 7.59-7.47 (m, 2H), 7.28-7.24 (t, 2H),
7.10-7.08 (d, 1H), 4.41 (s, 2H), 3.63-3.53 (m, 2H), 3.50-3.40 (m,
4H), 0.90-0.84 (t, 2H), 0.72 (s, 2H).
Example 48. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(1,3-dimethyl-2-oxoindolin-3-yl)phenyl)amino-
)-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidin-5-one, i-298
##STR00174## ##STR00175##
[0551] Synthesis of compound 48.2. To a solution of compound 48.1
(5 g, 20.57 mmol, 1.0 eq.) in THF (50 mL) was added Mel (3.21 g,
22.6 mmol, 1.1 eq.) and 18-crown-6 (1.35 g, 5.14 mmol, 0.25 eq.).
The reaction was cooled to -78.degree. C. Potassium tert-butoxide
(2.53 g, 22.63 mmol, 1.1 eq.) was added to the reaction mixture and
it was stirred at room temperature for 4 days. After completion of
the reaction, mixture was poured into water, NH.sub.4Cl solution
was added and product was extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to get pure 48.2 (5 g, 89.09%). MS (ES): m/z 257.13
[M+H].sup.+.
[0552] Synthesis of compound 48.3. To a solution of compound 48.2
(5.0 g, 19.45 mmol, 1.0 eq) in EtOH (100 mL), a solution of NaOH
(3.9 g, 97.2 mmol, 5.0 eq.) in water (20 mL) was added. Reaction
was stirred at room temperature for 3 hours. After completion of
the reaction, solvent was evaporated under reduced pressure and
reaction mixture was poured into water. Aqueous layer was acidified
with HCl and product was extracted with EtOAc. Organic layers were
combined and dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to get pure 48.3 (3.73 g, 83.7%). MS (ES): m/z
229.07 [M+H].sup.+.
[0553] Synthesis of compound 48.4. To a solution of 48.3 (3.7 g,
16.3 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (60 ml) was added
2-fluoro-N-methylaniline (2.03 g, 16.28 mmol, 1.0 eq.) at room
temperature. The reaction mixture was cooled to 0.degree. C. and
DMAP (0.397 g, 3.25 mmol, 0.2 eq.) was added. Further dicyclohexyl
carbodiimide (4.0 g, 19.5 mmol, 1.2 eq.) was added to the reaction
mixture at 0.degree. C. The reaction mixture was stirred at room
temperature for 24 h. After completion of the reaction, mixture was
poured into water and extracted with CH.sub.2Cl.sub.2. Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to furnish pure 48.4 (4 g, 73.1%). MS (ES): m/z
336.20 [M+H].sup.+.
[0554] Synthesis of compound 48.5. To a solution of compound 48.4
(1 g, 2.97 mmol, 1.0 eq.) in DMF (10 mL) was added potassium
tert-butoxide (0.66 g, 5.95 mmol, 2.0 eq.). The reaction mixture
was stirred at 80.degree. C. for 24 h. After completion of the
reaction, mixture was poured into water and product was extracted
with EtOAc. Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 48.5
(0.28 g, 29.8%). MS (ES): m/z 316.20 [M+H].sup.+.
[0555] Synthesis of compound 48.6. To a solution of 48.5 (0.28 g,
0.88 mmol, 1.0 eq) in 1,4-dioxane (20 mL) was added benzyl amine
(0.19 g, 1.77 mmol, 2.0 eq.) and Cs.sub.2CO.sub.3 (0.86 g, 2.65
mmol, 3.0 eq.). The reaction mixture was degassed for 30 minutes
using argon, then Pd.sub.2(dba).sub.3 (0.081 g, 0.09 mmol, 0.1 eq)
and 2-Dicylcohexylphosphino-2'-(N,N-dimethylamino)-biphenyl (0.069
g, 0.18 mmol, 0.2 eq) were added, and suspension was again degassed
for 5 min. Reaction was stirred at 100.degree. C. for 3 h. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 48.6 (0.15 g, 49.46%). MS (ES): m/z 342.44 [M+H].sup.+.
[0556] Synthesis of compound 48.7. To a suspension of Pd(OH).sub.2
(0.02 g) in MeOH (5 ml) was added 48.6 (0.15 g, 0.44 mmol, 1.0 eq)
under nitrogen. It was purged with H.sub.2 gas for 1 h. Reaction
mixture was filtered through celite and obtained filtrate was
concentrated under reduced pressure to get crude 48.7 (0.1 g,
90.5%) which was used as such for the next step, MS (ES): m/z
252.32 [M+H].sup.+.
[0557] Synthesis of compound 48.8. To a solution of 1.1 (0.08 g,
0.185 mmol, 1.0 eq) in n-butanol (2 mL) was added 48.7 (0.046 g,
0.185 mmol, 1.0 eq) and DIPEA (0.071 g, 0.556 mmol, 3.0 eq). The
reaction mixture was stirred at 90.degree. C. for 3 h. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 48.8 (0.08 g, 66.7%). MS(ES): m/z 647.68 [M+H].sup.+.
[0558] Synthesis of compound I-48. Compound 48.8 (0.08 g, 0.123
mmol, 1.0 eq) was dissolved in HBr/HOAc (1 ml). Reaction was
stirred at room temperature for 30 minutes. After completion of the
reaction, water was added to reaction mixture and basified with
satd. NaHCO.sub.3 and extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish I-48 (0.05 g, 81.4%). MS (ES): m/z 497.51
[M+H].sup.+; NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.06 (s, 1H),
8.90 (s, 1H), 7.71-7.04 (m, 11H), 4.47 (s, 2H), 3.18 (s, 3H) 1.66
(s, 3H).
Example 49. Synthesis of
2-(2,6-difluorophenyl)-4-((2-isopropyl-2,3-dihydro-1H-pyrrolo[3,4-c]pyrid-
in-6-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-49
##STR00176## ##STR00177##
[0560] Synthesis of compound 49.2. Compound 49.1 (19 g, 107.9 mmol,
1.0 eq.) was dissolved in CH.sub.2Cl.sub.2 (200 mL) and cooled at
0.degree. C. N,N-Diisopropyl amine (53.5 ml, 0.375 mmol, 3.48 eq.)
was added and mixture was stirred at room temperature for 15 h.
After completion of the reaction, reaction mixture was poured into
water and product was extracted with CH.sub.2Cl.sub.2. Organic
layer was combined and dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to furnish 49.2 (24 g, 92.35%). MS (ES): m/z 240.73
[M+H].sup.+.
[0561] Synthesis of compound 49.3. The compound 49.2 (24.0 g, 100
mmol, 1.0 eq) was dissolved in diethyl ether (200 mL) and cooled to
-75.degree. C. N,N-Diisopropyl amine (72 mL, 500 mmol, 5 eq.) and
n-BuLi (200 ml, 500 mmol, 5.0 eq.) were added dropwise to the
reaction mixture at -78.degree. C. Reaction was stirred for 15
minutes at -78.degree. C., then DMF (12 ml, 150 mmol, 1.5 eq.) was
added at -78.degree. C. and reaction was stirred for 1 h. After
completion of the reaction, mixture was poured into water, quenched
with 10% citric acid and extracted with diethyl ether. Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which is purified by column
chromatography to furnish 49.3 (23.3 g, 86.8%). MS (ES): m/z 268.74
[M+H].sup.+.
[0562] Synthesis of compound 49.4. To a solution of 49.3 (23.25 g,
86.51 mmol, 1.0 eq) in ethanol (500 ml) was added NaBH.sub.4 (23.34
g, 614 mmol, 7.1 eq.). Reaction stirred at room temperature for 2
h. After completion of the reaction, reaction mixture was poured
into water, quenched with 1N HCl and extracted with EtOAc. Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to provide 49.4 (20 g, 85.4%). MS (ES): m/z 270.76
[M+H].sup.+.
[0563] Synthesis of compound 49.5. Compound 49.4 (20 g, 74.1 mmol,
1.0 eq.) was added in 6N HCl solution. Reaction was heated at
120.degree. C. for 2 h. After completion of the reaction, mixture
was cooled, basified with sodium carbonate and the product was
extracted with EtOAc. Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 49.5
(5.69 g, 45.43%). MS(ES): m/z 169.56 [M+H].sup.+.
[0564] Synthesis of compound 49.6. To a solution of 49.5 (5.69 g,
33.55 mmol, 1.0 eq) in ethanol (100 ml) was added NaBH.sub.4 (8.92
g, 234.9 mmol, 7.0 eq.). Reaction was stirred at room temperature
for 2 h. After completion of the reaction, mixture was poured into
water, quenched with 1N HCl solution and extracted with EtOAc.
Organic layers were combined, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 49.6 (2.1 g, 36.05%).
MS (ES): m/z 173.60 [M+H].sup.+.
[0565] Synthesis of compound 49.7. To a solution of 49.6 (2.1 g,
12.1 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (30 mL) was added SOCl.sub.2
(7.22 g, 60.7 mmol, 5.0 eq.). Reaction was heated at 50.degree. C.
till it becomes clear. Thionyl chloride was removed by
distillation. Dry CH.sub.2Cl.sub.2 was added and the reaction
mixture was cooled to 0.degree. C. Isopropyl amine (3.58 g, 60.7
mmol, 5.0 eq.) was added under nitrogen atmosphere and the reaction
mixture was stirred for 1.5 h at same temperature. After completion
of the reaction, mixture was poured into water and product was
extracted with CH.sub.2Cl.sub.2. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish 49.7 (0.6 g, 25.22%). MS (ES): m/z 196.68 [M+H].sup.+.
[0566] Synthesis of compound 49.8. Compound 49.7 (0.55 g, 28.06
mmol, 1.0 eq) was dissolved in 1,4-dioxane (20 ml) and was degassed
using argon for 10 minutes. 2,4-Dimethoxy benzyl amine (0.703 g,
42.09 mmol, 1.5 eq.) and cesium carbonate (1.828 g, 5.612 mmol, 2.0
eq.) were added to the reaction mixture. The reaction mixture was
degassed for further 10 minutes.
Dicylcohexylphosphino-2'-(N,N-dimethylamino)-biphenyl (0.220 g,
0.561 mmol, 0.5 eq.) and Pd.sub.2(dba).sub.3 (0.256 g, 0.280 mmol,
0.1 eq) were added to the reaction mixture and it was heated at
110.degree. C. for 24 h. After completion of the reaction, mixture
was poured into water and product was extracted with
CH.sub.2Cl.sub.2. Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to get pure 49.8
(0.35 g, 71.0%). MS (ES): m/z 176.24 [M+H].sup.+.
[0567] Synthesis of compound 49.9. Compound 49.8 (0.25 g, 0.764
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (5 mL). Triethyl
silane (0.27 g, 2.29 mmol, 3.0 eq.) and TFA (3 mL) were added to
the reaction mixture. The reaction mixture was stirred at room
temperature for 24 h. After completion of reaction, mixture was
concentrated under reduced pressure, basified by NaHCO.sub.3
solution and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column to yield 49.9 (0.075
g, 29.8%). MS (ES): m/z 11125 [M+H].sup.+.
[0568] Synthesis of compound 49.10. To a solution of 4.4 (0.150 g,
0.348 mmol, 1.0 eq) in 1,4-dioxane (3 ml) was added 49.9 (0.067 g,
0.383 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.120 g, 0.871 mmol, 2.5
eq). The reaction mixture was degassed for 10 min. using argon,
then Pd.sub.2(dba).sub.3 (0.031 g, 0.034 mmol, 0.1 eq) and Xantphos
(0.040 g, 0.069 mmol, 0.2 eq) were added, and suspension was again
degassed for 5 min. The reaction was stirred at 100.degree. C. for
1.5 h. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish 49.10 (0.035 g, 17.6%). MS(ES): m/z
571.63 [M+H].sup.+.
[0569] Synthesis of compound I-49. Compound 49.10 (0.030 g, 0.052
mmol, 1.0 eq) was dissolved in HBr/HOAc (0.5 ml) and the reaction
was stirred at room temperature for 1 h. After completion of the
reaction, water was added. Mixture was basified with saturated
bicarbonate solution and product was extracted with EtOAc. Organic
layers were combined and dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain dehydrated crude
which was purified by column chromatography to furnish I-49 (0.002
g, 9.0%). MS (ES): m/z 421.45 [M+H].sup.+; .sup.1H NMR (CD.sub.3OD,
400 MHz): .delta. 8.70 (s, 1H), 8.24 (s, 1H), 7.56-7.52 (m, 1H),
7.17-7.13 (t, 2H), 7.05 (s, 1H), 4.48 (s, 2H), 4.04-4.01 (s, 4H),
2.88-2.85 (m, 1H), 1.25-1.23 (d, 3H).
Example 50. Synthesis of
4-((4-(4-oxa-7-azaspiro[2.5]octane-7-carbonyl)phenyl)amino)-2-(2,6-difluo-
rophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-50
##STR00178##
[0571] Synthesis of compound 50.1. To a solution of p-aminobenzoic
acid (0.080 g, 0.583 mmol, 1.0 eq) in DMF (2 mL) was added HATU
(0.33 g, 0.88 mmol, 1.5 eq) at 0.degree. C. The reaction was
stirred at 0.degree. C. for 45 minutes. The reaction was warmed to
ambient temperature and stirred for additional ten minutes. Further
4-oxa-7-azaspiro[2.5]octane (0.104 g, 0.700 mmol, 1.2 eq) and DIPEA
(0.150 g, 1.17 mmol, 2.0 eq) were added at 0.degree. C. and the
reaction was allowed to stir at room temperature for 2 hours. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. Crude was purified
by column chromatography to furnish 50.1 (0.070 g, 51.66%). MS
(ES): m/z 232.28 [M+H].sup.+.
[0572] Synthesis of compound 50.2. To a solution of 4.4 (0.100 g,
0.232 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 50.1 (0.054 g,
0.23 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.064 g, 0.47 mmol, 2.0
eq). Reaction mixture was degassed for 10 minutes under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq)
and Xantphos (0.026 g, 0.046 mmol, 0.2 eq) were added, and again
degassed for 5 minutes. Reaction was stirred at 100.degree. C. for
2 h. After completion of the reaction, reaction mixture was poured
in water and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 50.2 (0.098, 67.4%).
MS(ES): m/z 626.66 [M+H].sup.+.
[0573] Synthesis of compound I-50. The compound 50.2 (0.098 g,
0.156 mmol, 1.0 eq) was dissolved in HBr/HOAc (33% solution, 3 mL)
and stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into ice-water and basified with satd.
NaHCO.sub.3 and with EtOAc. Organic layers were combined, washed
with brine, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish I-50 (0.041 g, 55.0%). MS(ES): m/z 476.48
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): 9.17 (s, 1H),
8.77 (s, 1H), 7.56-7.50 (m, 1H), 7.43 (s, 4H), 7.24-7.20 (m, 3H),
4.40 (s, 2H), 3.64-3.43 (m, 6H), 0.85-0.52 (m, 4H).
Example 51. Synthesis of
4-((4-(7-oxa-4-azaspiro[2.5]octane-4-carbonyl)phenyl)amino)-2-(2,6-difluo-
rophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-51
##STR00179##
[0575] Synthesis of compound 51.1. To a solution of
7-oxa-4-azaspiro[2.5]octane (0.080 g, 0.540 mmol, 1.0 eq) in dry
THF were added K.sub.2CO.sub.3 (0.149 g, 1.081 mmol, 2.0 eq) and
p-nitrobenzoyl chloride (0.1 g, 0.54 mmol, 1.0 eq) at 0.degree. C.
The reaction mixture was stirred at room temperature for 2 h. After
completion of the reaction, mixture was poured into crushed ice,
neutralized by satd. NaHCO.sub.3 and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over sodium sulphate
and concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 51.1 (0.12 g, 84.9%).
MS(ES): m/z 262.27 [M+H].sup.+.
[0576] Synthesis of compound 51.2. To a suspension of Pd/C (0.025
g) in methanol (3 mL) was added 51.1 (0.12 g, 0.46 mmol, 1.0 eq) in
MeOH (2 mL). Suspension was purged with H.sub.2 gas for 1.5 hr.
After completion of the reaction, mixture was filtered through
celite, washed with methanol and the filtrate was concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to get pure 51.2 (0.06 g, 56.5%).
MS(ES): m/z 232.28 [M+H].sup.+.
[0577] Synthesis of compound 51.3. To a mixture of 4.4 (0.10 g,
0.23 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 51.2 (0.053 g,
0.232 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.064 g, 0.47 mmol, 2.0
eq). The reaction mixture was degassed for 10 minutes under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq)
and Xantphos (0.026 g, 0.046 mmol, 0.2 eq) were added, again
degassed for 5 min. The reaction was stirred at 100.degree. C. for
12 h. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAC. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 51.3 (0.093 g,
63.94%). MS(ES): m/z 626.66 [M+H].sup.+.
[0578] Synthesis of compound I-51. Compound 51.3 (0.093 g, 0.148
mmol, 1.0 eq) was dissolved in HBr/HOAc (2 mL) and reaction was
stirred at room temperature for 1 h. After completion of reaction,
reaction mixture was poured in water, basified with satd.
NaHCO.sub.3 and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish I-51 (0.041 g, 57.9%). MS(ES): m/z 476.48 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): 9.17 (s, 1H), 8.78 (s, 1H),
7.56-7.39 (m, 5H), 7.24-7.20 (m, 3H), 4.41 (s, 2H), 3.63 (s, 4H),
3.54 (s, 2H), 0.78 (s, 4H).
Example 52. Synthesis of
4-((5-(2-oxa-8-azaspiro[4.5]decan-8-yl)pyridin-2-yl)amino)-2-(2,6-difluor-
ophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-52
##STR00180##
[0580] Synthesis of 52.3. To a mixture of 52.1 (0.045 g, 0.118
mmol, 1.0 eq) in 1,4-dioxane (1.0 mL) was added 52.2 (0.023 g,
0.118 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.048 g, 0.354 mmol, 3.0
eq). The reaction mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.3 (0.010 g, 0.011 mmol, 0.1 eq) and Xantphos
(0.013 g, 0.023 mmol, 0.2 eq) were added and mixture was degassed
for additional five minutes. The reaction was stirred at
100.degree. C. for 1 hour. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish 52.3 (0.045 g, 61.8%). MS(ES): m/z 577.63 [M+H].sup.+.
[0581] Synthesis of I-52. Compound 52.3 (0.045 g, 0.077 mmol, 1.0
eq) was dissolved in CH.sub.2Cl.sub.2 (1 mL) and TFA (0.5 mL) was
added to the reaction. The reaction was stirred at room temperature
for 1 hour. After completion of the reaction, mixture was poured
into water, basified with NaHCO.sub.3 solution and extracted with
CH.sub.2Cl.sub.2. Organic layers were combined and dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish I-52
(0.025 g, 59.9%). MS(ES): m/z 477.52 [M+H].sup.+; .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.50 (s, 1H), 8.80 (s, 1H), 8.36
(s, 1H), 8.03 (d, 1H), 7.60-7.53 (m, 1H), 7.47-7.44 (dd, 1H),
7.27-7.23 (t, 2H), 7.09-7.07 (d, 1H), 4.40 (s, 2H), 3.76-3.73 (t,
2H), 3.46 (s, 2H), 3.19-3.07 (m, 4H), 1.74-1.70 (t, 2H), 1.61-1.53
(m, 4H).
Example 53. Synthesis of
4-((5-(l-oxa-9-azaspiro[5.5]undecan-9-yl)pyridin-2-yl)amino)-2-(2,6-diflu-
orophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-53
##STR00181## ##STR00182##
[0583] Synthesis of compound 53.2. To a solution of 53.1 (0.17 g,
1.19 mmol, 1.0 eq) in DMSO (3 mL) was added
1-oxa-9-azaspiro[5.5]undecane (0.229 g, 0.119 mmol, 1.0 eq.) and
DIPEA (1.54 g, 11.9 mmol, 10.0 eq.). The reaction was stirred at
110.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. This was purified by tituration with hexane to
provide 53.2 (0.2 g, 60.3%). MS(ES): m/z 277.32 [M+H].sup.+.
[0584] Synthesis of compound 53.3. To a suspension of 10% Pd/C
(0.05 g) in MeOH (2 mL) was added a solution of 53.2 (0.2 g, 0.72
mmol, 1.0 eq) in MeOH (3.0 mL) under nitrogen atmosphere. Reaction
mixture was purged with H.sub.2 gas for 2 hours. After completion
of the reaction, mixture was filtered through celite, washed with
MeOH and concentrated under reduced pressure. The crude material
was purified by column chromatography to furnish 53.3 (0.14 g,
78.5%) MS (ES): m/z 247.34 [M+H].sup.+.
[0585] Synthesis of compound 53.4. To a mixture of 4.4 (0.1 g, 0.23
mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 53.3 (0.063 g, 0.255
mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.064 g, 0.465 mmol, 2.0 eq).
The reaction mixture was degassed for 10 minutes using argon gas,
then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq) and Xantphos
(0.026 g, 0.046 mmol, 0.2 eq) were added and suspension was
degassed for additional 5 minutes. The reaction was stirred at
110.degree. C. for 1 hour. After completion of the reaction,
mixture was poured into water and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
provide 53.4 (0.09 g, 60.4%). MS(ES): m/z 641.72 [M+H].sup.+.
[0586] Synthesis of compound I-53. Compound 53.4 (0.09 g, 0.14
mmol, 1.0 eq) was dissolved in HBr/HOAc (3 mL) and reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with NaHCO.sub.3
solution and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude. The crude was purified by column chromatography to
provide I-53 (0.038 g, 55.1%). MS(ES): m/z 491.54 [M+H].sup.+; NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.49 (s, 1H), 8.79 (s, 1H), 8.35
(s, 1H), 8.02 (d, 2H), 7.59-7.54 (m, 1H), 7.46-7.43 (dd, 1H),
7.27-7.23 (t, 2H), 7.08-7.06 (d, 1H), 4.40 (s, 2H), 3.58-3.55 (t,
2H), 3.33-3.28 (t, 2H), 2.98-2.93 (t, 2H), 1.89-1.86 (d, 2H),
1.59-1.39 (m, 8H).
Example 54. Synthesis of
4-((4-(1-oxa-9-azaspiro[5.5]undecane-9-carbonyl)phenyl)amino)-2-(2,6-difl-
uorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-54
##STR00183##
[0588] Synthesis of compound 54.2. To a solution of 54.1 (0.2 g,
1.08 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2 mL) was added
1-oxa-9-azaspiro[5.5]undecane (0.21 g, 1.08 mmol, 1.0 eq) and DIPEA
(0.33 g, 3.24 mmol, 3.0 eq). The reaction was stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water and extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain pure 54.2 (0.16 g,
48.8%). MS(ES): m/z 304.35 [M+H].sup.+.
[0589] Synthesis of compound 54.3. To a suspension of 10% Pd/C
(0.05 g) in MeOH (2 mL) was added a solution of 54.2 (0.16 g, 0.53
mmol, 1.0 eq) in MeOH (3 mL) under nitrogen. Reaction mixture was
purged with H.sub.2 gas for 1 hour. After completion of the
reaction, mixture was filtered through celite and washed with MeOH.
Obtained filtrate was concentrated under reduced pressure to
furnish 54.3 (0.05 g, 34.7%) MS (ES): m/z 274.36 [M+H].sup.+.
[0590] Synthesis of compound 54.4. To a mixture of 4.4 (0.075 g,
0.174 mmol, 1.0 eq) in 1,4-dioxane (3 mL) was added 54.3 (0.047 g,
0.174 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.048 g, 0.348 mmol, 2.0
eq). Reaction mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.015 g, 0.017 mmol, 0.1 eq) and Xantphos
(0.02 g, 0.034 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 110.degree.
C. for 2 hours. After completion of the reaction, mixture was
poured into water and extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. This
crude was purified by column chromatography to provide 54.4 (0.07
g, 60.1%). MS(ES): m/z 668.74 [M+H].sup.+.
[0591] Synthesis of compound I-54. Compound 54.4 (0.07 g, 0.104
mmol, 1.0 eq) was dissolved in HBr/HOAc (3 mL, 33% HBr in AcOH) and
reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 solution and product was extracted with
EtOAc. Organic layers were combined, dried over Na.sub.2SO.sub.4
and concentrated under reduced pressure to obtain crude material
which was purified by column chromatography to furnish I-54 (0.029
g, 53.4%). MS(ES): m/z 518.56 [M+H].sup.+; .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.15 (s, 1H), 8.77 (s, 1H),
7.57-7.50 (m, 1H), 7.41 (s, 4H), 7.23-7.18 (m, 3H), 4.41 (s, 2H),
4.09 (m, 2H), 3.56 (m, 2H), 3.16 (m, 2H), 1.84-1.82 (m, 4H), 1.56
(m, 2H), 1.43-1.40 (m, 6H).
Example 55. Synthesis of
2-(2,6-difluorophenyl)-4-((5-(1-(3,6-dihydro-2H-pyran-4-yl)-3,5,5-trimeth-
yl-2-oxopyrrolidin-3-yl)pyridin-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]p-
yridin-5-one, I-55
##STR00184## ##STR00185##
[0593] Synthesis of compound 55.2. Acetyl chloride (15.1 g, 192.3
mmol, 3.3 eq) was added slowly to MeOH (100 mL) at room
temperature. The reaction stirred at room temperature for 15
minutes. Compound 55.1 (10 g, 58.3 mmol, 1.0 eq) was added slowly
and the reaction mixture was allowed to stir at room temperature
for 16 hours. After completion of the reaction, solvent was
evaporated under reduced pressure. Satd. NaHCO.sub.3 solution was
added to reaction mixture and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
pure 55.2 (10.0 g, 92.4%). MS(ES): m/z 185.61 [M+H].sup.+.
[0594] Synthesis of compound 55.3. To a solution of 55.2 (10.0 g,
54.0 mmol, 1.0 eq) in toluene (100 mL) was added K.sub.2CO.sub.3
(16.5 g, 118.8 mmol, 2.2 eq), paraformaldehyde (2.66 g, 70.19 mmol,
1.3 eq) and tetrabutyl ammonium chloride (1.5 g, 5.4 mmol, 0.1 eq)
at room temperature. The reaction was allowed to stir at room
temperature for 2 hours. After completion of the reaction, reaction
mixture was poured into water and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
pure 1.2 (2.6 g, 24.42%). MS(ES): m/z 197.62 [M+H].sup.+.
[0595] Synthesis of compound 55.4. To a solution of 55.3 (2.6 g,
13.2 mmol, 1.0 eq) in CH.sub.3CN (40 mL) was added 2-nitro propane
(1.41 g, 15.8 mmol, 1.2 eq) and DBU (2.40 g, 15.82 mmol, 1.2 eq) at
room temperature. The reaction was stirred at room temperature for
6 hours. After completion of the reaction, CH.sub.3CN was
evaporated under reduced pressure, water was added to the reaction
mixture and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to provide 55.3 (2.2 g,
58.3%). MS(ES): m/z 286.71 [M+H].sup.+.
[0596] Synthesis of compound 55.5. To a solution of NaH (0.40 g,
16.9 mmol, 2.2 eq) in DMF (20 mL) at 0.degree. C. was added 55.4
(2.2 g, 7.68 mmol, 1.0 eq) and the reaction was stirred at
0.degree. C. for 5 minutes. Methyl iodide (2.73 g, 19.2 mmol, 2.5
eq) was added dropwise to the reaction mixture at 0.degree. C. The
reaction mixture was stirred at room temperature for 1 hour. After
completion of the reaction, water was added to the reaction mixture
and product was extracted with EtOAc. Organic layers were combined,
washed with brine solution, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to provide pure 55.5 (1.5 g,
65.0%). MS(ES): m/z 300.74 [M+H].sup.+.
[0597] Synthesis of compound 55.6. To a solution of 55.5 (1.5 g,
5.0 mmol, 1.0 eq) in EtOH (15.0 mL) was added iron powder (2.8 g,
50.0 mmol, 10.0 eq) and NH.sub.4Cl (2.65 g, 50.0 mmol, 10.0 eq).
The reaction mixture was stirred at 80.degree. C. for 2 hours.
After completion of the reaction, water was added to the reaction
mixture and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain pure product.
Dichloromethane was added to the pure product and the reaction was
stirred at room temperature overnight to get pure cyclized product
55.6 (0.8 g, 67.2%). MS(ES): m/z 238.72 [M+H].sup.+.
[0598] Synthesis of compound 55.7. To a solution of 55.7 (0.8 g,
3.36 mmol, 1.0 eq) in 1,4-dioxane (5.0 mL) was added
Cs.sub.2CO.sub.3 (3.27 g, 10.1 mmol, 3.0 eq) and CuI (0.063 g,
0.336 mmol, 0.1 eq). The reaction mixture was degassed using argon
for 15 minutes at room temperature. 4-Bromo-3,6-dihydro-2H-pyran
(1.64 g, 10.1 mmol, 3.0 eq) and N,N-dimethyl ethylene diamine
(0.029 g, 0.34 mmol, 0.1 eq) were added to the reaction mixture.
The reaction was stirred at 160.degree. C. for 1 hour in a
microwave reactor. After completion of the reaction, water was
added to the reaction mixture and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide 55.7
(0.3 g, 27.9%). MS(ES): m/z 320.82 [M+H].sup.+.
[0599] Synthesis of compound 55.8. To a solution of 55.7 (0.16 g,
0.5 mmol, 1.0 eq) in 1,4-dioxane (5 mL) was added 2,4-dimethoxy
benzyl amine (0.11 g, 0.65 mmol, 1.3 eq) and Cs.sub.2CO.sub.3
(0.325 g, 10.0 mmol, 2.0 eq). The reaction mixture was degassed
using argon for 30 minutes at room temperature. Devphos ligand
(0.039 g, 0.1 mmol, 0.2 eq) and Pd.sub.2(dba).sub.3 (0.045 g, 0.05
mmol, 0.1 eq) were added to the reaction mixture. The reaction was
stirred at 100.degree. C. for 3 hours. After completion of the
reaction, water was added to the mixture and product was extracted
with EtOAc. Organic layers were combined, washed with brine, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. The crude was purified by column
chromatography to furnish 55.8 (0.09 g, 40.1%). MS(ES): m/z 451.57
[M+H].sup.+.
[0600] Synthesis of compound 55.9. To a solution of 55.8 (0.06 g,
0.132 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2 mL) was added TFA (0.1
mL) and triethyl silane (0.1 mL) at 0.degree. C. under nitrogen
atmosphere. The reaction was allowed to stir at room temperature
for 2 hours. After completion of the reaction, solvent was removed
under reduced pressure to furnish 55.9 (0.05 g, 99.0%) MS (ES): m/z
301.39 [M+H].sup.+.
[0601] Synthesis of compound 55.91. To a mixture of 52.1 (0.02 g,
0.052 mmol, 1.0 eq) in 1,4-dioxane (2 mL) was added 55.9 (0.015 g,
0.52 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.021 g, 0.157 mmol, 3.0
eq). The reaction mixture was degassed for 10 minutes using argon
then Pd.sub.2(dba).sub.3 (0.004 g, 0.005 mmol, 0.1 eq) and Xantphos
(0.006 g, 0.01 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 100.degree.
C. for 2 hours. After completion of the reaction, mixture was
poured into water and product was extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide pure
55.91 (0.015 g, 40.9%). MS(ES): m/z 583.40 [M+H].sup.+.
[0602] Synthesis of compound I-55. Compound 55.91 (0.015 g, 0.025
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (1 mL) and TFA (0.1
mL) was added to the reaction mixture. The reaction was stirred at
room temperature for 30 minutes. After completion of the reaction,
reaction mixture was poured into water, basified with satd.
NaHCO.sub.3 and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
provide I-55 (0.009 g, 64.2%). MS(ES): m/z 545.59 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.74 (s, 1H), 8.90 (s,
1H), 8.58 (s, 1H), 8.37-8.36 (d, 1H), 7.81-7.78 (dd, 1H), 7.62-7.54
(m, 1H), 7.28-7.24 (t, 2H), 7.17-7.14 (d, 1H), 5.70 (s, 1H), 4.43
(s, 2H), 4.17-4.16 (d, 2H), 3.76-3.73 (t, 2H), 2.19-2.13 (s, 2H),
1.67 (s, 1H), 1.45 (s, 3H), 1.28 (s, 3H), 1.03 (s, 3H).
Example 56. Synthesis of
2-(6-fluoro-2-oxopyridin-1(2H)-yl)-4-((5-morpholinopyridin-2-yl)amino)-6,-
7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-56
##STR00186## ##STR00187##
[0604] Synthesis of compound 56.2. Sodium metal (2.0 g) was
dissolved in t-butanol (50 mL) and refluxed for 1 hour. The
reaction mixture was cooled to room temperature and 56.1 (5.0 g,
43.85 mmol, 1.0 eq) was added. The reaction was stirred at reflux
temperature for 12 hours. After completion of the reaction, solvent
was removed under reduced pressure. Ice cold water was added and
the pH was adjusted to 3.0 by addition of dilute HCl. The product
was extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography to provide 56.2 (2.0 g, 40.1%). MS(ES): m/z 113.09
[M+H].sup.+.
[0605] Synthesis of compound 56.4. To a solution of 56.3 (1.0 g,
4.55 mmol, 1.0 eq) in 1,4-dioxane (10 mL) was added 56.2 (0.51 g,
4.55 mmol, 1.0 eq) and Cs.sub.2CO.sub.3 (4.43 g, 13.63 mmol, 3.0
eq). The Reaction mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.3 (0.415 g, 0.454 mmol, 0.1 eq) and Xantphos
(0.525 g, 0.91 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 100.degree.
C. for 1 hour. After completion of the reaction, reaction mixture
was poured into water and product was extracted with EtOAc. Organic
layers were combined, washed with brine solution, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 56.4
(0.40 g, 29.7%). MS(ES): m/z 296.68 [M+H].sup.+.
[0606] Synthesis of compound 56.5. To a solution of 56.4 (0.3 g,
1.013 mmol, 1.0 eq) in ethylene dichloride (10 mL) was added
N-bromo succinimide (0.902 g, 5.067 mmol, 5.0 eq) and benzyl
peroxide (0.061 g, 0.255 mmol, 0.25 eq). The reaction was stirred
at 100.degree. C. for 5 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide 56.5
(0.175 g, 46.1%). MS(ES): m/z 375.58 [M+H].sup.+.
[0607] Synthesis of compound 56.6. To a solution of 56.5 (0.175 g,
0.466 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3 mL) was added
2,4-dimethoxy benzyl amine (0.077 g, 0.466 mmol, 1.0 eq) and
Et.sub.3N (0.094, 0.933 mmol, 2.0 eq). The reaction was stirred at
room temperature for 1 hour. After completion of the reaction,
mixture was poured into water and product was extracted with
CH.sub.2Cl.sub.2. Organic layers were combined, washed with brine,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude material. The crude was purified by column
chromatography to furnish 56.6 (0.09 g, 44.9%). MS(ES): m/z 429.83
[M+H].sup.+.
[0608] Synthesis of compound 56.8. To a mixture of 56.6 (0.090 g,
0.209 mmol, 1.0 eq) in 1,4-dioxane (2 mL) was added 56.7 (0.037 g,
0.209 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.086 g, 0.627 mmol, 3.0
eq). The reaction mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.4 (0.018 g, 0.020 mmol, 0.1 eq) and xantphos
(0.023 g, 0.041 mmol, 0.2 eq) were added. Suspension was degassed
for additional five minutes. The reaction was stirred at
110.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish 56.8 (0.08 g, 66.7%). MS(ES): m/z 572.60 [M+H].sup.+.
[0609] Synthesis of compound I-56. Compound 56.8 (0.08 g, 0.139
mmol, 1.0 eq) was dissolved in TFA (2.0 mL). The reaction was
stirred at 70.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 and extracted with EtOAc. Organic layers were combined
and dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by column
chromatography to provide I-56 (0.040 g, 77.5%). MS (ES): m/z
422.42 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta.
9.51 (s, 1H), 8.68 (s, 1H), 8.13-7.97 (m, 3H), 7.49-7.46 (dd, 1H),
7.14-7.03 (m, 3H), 4.25 (s, 2H), 3.76-3.73 (t, 4H), 3.12-3.10 (t,
4H).
Example 57. Synthesis of
4-((4-(6-azaspiro[2.5]octane-6-carbonyl)phenyl)amino)-2-(2,6-difluorophen-
yl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-57
##STR00188##
[0611] Synthesis of compound 57.1. To a solution of
6-azaspiro[2.5]octane (0.119 g, 0.808 mmol, 1.0 eq) in THF (3.0 mL)
was added 54.1 (0.15 g, 0.81 mmol, 1.0 eq) and Et.sub.3N (0.245 g,
2.425 mmol, 3.0 eq) dropwise at 0.degree. C. The reaction was
stirred at room temperature for 2 hours. After completion of the
reaction, water was added to the mixture and product was extracted
with EtOAc. Organic layers were combined, washed with brine, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. The crude was purified by titration with
hexanes to provide pure 57.1 (0.16 g, 76.0%). MS(ES): m/z 260.29
[M+H].sup.+.
[0612] Synthesis of compound 57.2. To a suspension of 10% Pd/C
(0.050 g) in MeOH (5 mL) was added a solution of 57.1 (0.16 g,
0.614 mmol, 1.0 eq) in MeOH (1 mL) under nitrogen. Reaction mixture
was purged with hydrogen gas for 2 hours. After completion of the
reaction, mixture was filtered through celite, washed with MeOH.
Obtained filtrate was concentrated under reduced pressure to get
pure 57.2 (0.1 g, 70.6%) MS (ES): m/z 230.31 [M+H].sup.+.
[0613] Synthesis of compound 57.3. To a mixture of 4.4 (0.1 g, 0.23
mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added 57.2 (0.058 g,
0.254 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.063 g, 0.462 mmol, 2.0
eq). The reaction mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq) and Xantphos
(0.026 g, 0.046 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 100.degree.
C. for 2 hours. After completion of the reaction, mixture was
poured into water and product was extracted with EtOAc. Organic
layer was combined, washed with brine, dried over Na.sub.2SO.sub.4
and concentrated under reduced pressure to obtain crude material.
The crude was purified by column chromatography to furnish 57.3
(0.088 g, 60.7%). MS(ES): m/z 624.69 [M+H].sup.+.
[0614] Synthesis of compound I-57. The compound 57.3 (0.088 g, 0.14
mmol, 1.0 eq) was dissolved in TFA (2.0 mL). The reaction mixture
was stirred at 70.degree. C. for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 solution and extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude material. The crude was purified
by column chromatography to furnish I-57 (0.035 g, 52.4%). MS(ES):
m/z 474.51 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz):
.delta. 9.16 (s, 1H), 8.76 (s, 1H), 7.57-7.50 (m, 1H), 7.45-7.39
(m, 4H), 7.24-7.19 (m, 3H), 4.41 (s, 2H), 3.67-3.31 (m, 4H),
1.34-1.17 (m, 4H), 0.34 (m, 4H).
Example 58. Synthesis of
4-((4-(3-oxa-9-azaspiro[5.5]undecane-9-carbonyl)phenyl)amino)-2-(2,6-difl-
uorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-58
##STR00189##
[0616] Synthesis of compound 58.1. To a mixture of 52.1 (0.06 g,
0.157 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added
(4-aminophenyl)(3-oxa-9-azaspiro[5.5]undecan-9-yl)methanone (0.043
g, 0.157 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.065 g, 0.473 mmol,
3.0 eq). Suspension was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.014 g, 0.015 mmol, 0.1 eq) and Xantphos
(0.018 g, 0.031 mmol, 0.2 eq) were added. The reaction was stirred
at 100.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish 58.1 (0.055 g, 56.4%). MS(ES): m/z 618.68 [M+H].sup.+.
[0617] Synthesis of compound I-58. Compound 58.1 (0.055 g, 0.088
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (1.0 mL) and TFA
(0.5 mL) was added to the reaction. The reaction was stirred at
room temperature for 1 hour. After completion of the reaction,
mixture was poured into water, basified with NaHCO.sub.3 solution
and extracted with CH.sub.2Cl.sub.2. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by column chromatography to
furnish I-58 (0.042 g, 91.1%). MS(ES): m/z 518.56 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): 9.21 (s, 1H), 8.78 (s, 1H),
7.57-7.53 (m, 1H), 7.42 (s, 4H), 7.24-7.19 (m, 3H), 4.42 (s, 2H),
3.55-3.46 (m, 8H), 1.46 (m, 8H).
Example 59. Synthesis of
2-(2,6-difluorophenyl)-4-((5-((3aR,6aS)-tetrahydro-1H-furo[3,4-c]pyrrol-5-
(3H)-yl)pyridin-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-59
##STR00190## ##STR00191##
[0619] Synthesis of compound 59.1. To a solution of 53.1 (0.2 g,
1.40 mmol, 1.0 eq) in DMSO (2.0 mL) was added
(3aR,6aS)-hexahydro-1H-furo[3,4-c]pyrrole hydrochloride (0.21 g,
1.40 mmol, 1.0 eq.) and DIPEA (2.45 mL, 14.07 mmol, 10.0 eq.). The
reaction mixture was stirred at 120.degree. C. for 1 hour. After
completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to provide 59.1 (0.23 g, 69.5%). MS(ES): m/z 236.17
[M+H].sup.+.
[0620] Synthesis of compound 59.2. To a suspension of 10% Pd/C
(0.025 g) in MeOH (5.0 mL) was added a solution of 59.1 (0.225 g,
0.957 mmol, 1.0 eq) in MeOH (5.0 mL) under nitrogen atmosphere.
Suspension was purged for 2 hours with H.sub.2 gas. After
completion of the reaction, mixture was filtered through celite,
washed with MeOH and obtained filtrate was concentrated under
reduced pressure to obtain crude 59.2 (0.18 g) MS (ES): m/z 206.26
[M+H].sup.+
[0621] Synthesis of compound 59.3. To a solution of 52.1 (0.065 g,
0.17 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added 59.2 (0.038 g,
0.187 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.058 g, 0.426 mmol, 2.5
eq). The reaction mixture was degassed for 10 minutes under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.015 g, 0.017 mmol, 0.1 eq)
and xantphos (0.019 g, 0.034 mmol, 0.2 eq) were added, and
suspension was degassed for additional 5 min. The reaction was
stirred at 100.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into water and product was extracted
with EtOAc. Organic layers were combined, washed with brine
solution, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude material. The crude was purified
by column chromatography to provide 59.3 (0.065 g, 69.7%). MS(ES):
m/z 551.5 [M+H].sup.+.
[0622] Synthesis of compound I-59. Compound 59.3 (0.065 g, 0.118
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (1.5 mL) and TFA
(0.3 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour After completion of
reaction, mixture was poured into water, basified with NaHCO.sub.3
solution and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude which was purified by trituration with Et.sub.2O
get pure I-59 (0.030 g, 84.7%). MS(ES): m/z 450.37 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.48 (s, 1H), 8.81 (s,
1H), 8.28 (s 1H), 7.79-7.78 (d, 1H), 7.54-7.61 (m, 1H), 7.28-7.24
(t, 2H), 7.18-7.15 (m, 1H), 7.11-7.09 (d, 1H), 4.41 (s, 2H),
3.86-3.83 (t, 2H), 3.52-3.50 (t, 2H), 3.32-3.28 (t, 2H), 3.19-3.17
(d, 2H), 2.98 (bs, 2H).
Example 60. Synthesis of
4-(4-((5-(6-azaspiro[2.5]octan-6-yl)pyridin-2-yl)amino)-5-oxo-6,7-dihydro-
-5H-pyrrolo[3,4-b]pyridin-2-yl)-3,5-difluorobenzonitrile, I-60
##STR00192##
[0624] Synthesis of compound 60.2. To a solution of 60.1 (0.070 g,
0.155 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added 20.3 (0.032
g, 0.155 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.043 g, 0.31 mmol, 2.0
eq). The reaction mixture was degassed for 10 minutes under argon
atmosphere, then Pd.sub.2(dba).sub.3 (0.014 g, 0.0155 mmol, 0.1 eq)
and Xantphos (0.018 g, 0.031 mmol, 0.2 eq) were added. Suspension
was degassed again for 5 minutes. The reaction was stirred at
110.degree. C. for 1 hour. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
provide 60.2 (0.070 g, 70.9%). MS(ES): m/z 572.62 [M+H].sup.+.
[0625] Synthesis of compound I-60. Compound 60.2 (0.070 g, 0.122
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (3.0 mL) and TFA
(0.4 mL) was added to the reaction mixture. The reaction mixture
was stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 solution and extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by trituration
with n-pentane and diethyl ether to provide pure I-60 (0.047 g,
81.4%). MS(ES): m/z 472.50 [M+H].sup.+; NMR (DMSO-d.sub.6, 400
MHz): .delta. 9.55 (s, 1H), 8.85 (s, 1H), 8.39 (s, 1H), 8.03 (d,
1H), 7.99-7.97 (d, 2H), 7.49-7.46 (dd, 1H), 7.11-7.09 (d, 1H), 4.41
(s, 2H), 3.20-3.17 (t, 4H), 1.46-1.40 (t, 4H), 0.329 (s, 4H).
Example 61. Synthesis of
2-(2,6-difluorophenyl)-4-((1-hydroxy-1,3-dihydro-benzo-[c][1,2]oxaborol-5-
-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-61
##STR00193## ##STR00194##
[0627] Synthesis of compound 61.2. Bis (pinacolate) diborate (0.9
g, 3.46 mmol, 1.0 eq), PdCl.sub.2(dppf) (0.277 g, 0.346 mmol, 0.1
eq) and AcOK (1.018 g, 10.38 mmol, 3.0 eq) were dissolved in
1,4-dioxane (10 mL). Suspension was degassed using argon, then a
solution of 61.1 (0.9 g, 3.46 mmol, 1.0 eq) in 1,4-dioxane (8.0 mL)
was added. Reaction mixture was stirred at 70.degree. C. for 3
hours. After completion of reaction, solids were filtered and
solvents were removed under reduced pressure. The crude was
suspended in water then extracted with extracted with EtOAc.
Organic layers were combined, washed with brine solution, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude which was purified by column chromatography to furnish
61.2 (0.40 g, 37.6%).
[0628] Synthesis of compound 61.3. Compound 61.2 (0.4 g, 1.30 mmol,
1.0 eq), and DIBAL (5 mL, 0.51 mmol, 5.0 eq) were dissolved in
CH.sub.2Cl.sub.2 (2.0 mL) at 0.degree. C. The reaction was stirred
for 4 hours at 0-5.degree. C. After completion of the reaction,
MeOH was added and reaction mixture was stirred for 20 minutes.
Dilute HCl was added and the product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to provide
crude 61.3 (0.36 g, 99.0%), which was used in the next step without
purification
[0629] Synthesis of compound 61.4. Compound 61.3 (0.36 g, 1.43
mmol, 1.0 eq) was dissolved in 6 M HCl (30 mL) and the reaction was
stirred at 80.degree. C. for 24 hours. After completion of the
reaction, water was added to the reaction mixture and the product
was extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to furnish 1.3 (0.1 g, 43.3%).
[0630] Synthesis of compound 61.5. To a suspension of 10% Pd/C
(0.25 g) in MeOH (5.0 mL) was added a solution of 61.4 (0.1 g, 0.3
mmol, 1.0 eq) in MeOH (3.0 mL) under nitrogen. Suspension was
purged with H.sub.2 gas for 1 hour. After completion of the
reaction, mixture was filtered through celite, washed with MeOH and
obtained filtrate was concentrated under reduced pressure to get
crude material. The crude was purified by trituration with n-hexane
and Et.sub.2O to provide 61.5 (0.060 g, 72.1%).
[0631] Synthesis of compound 61.6. To a mixture of 52.1 (0.06 g,
0.157 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added 61.5 (0.025
g, 0.157 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.067 g, 0.471 mmol,
3.0 eq). Mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.014 g, 0.015 mmol, 0.1 eq) and Xantphos
(0.016 g, 0.031 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 100.degree.
C. for 2 hours. After completion of the reaction, mixture was
poured into water and product was extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified using column chromatography
to furnish 61.6 (0.027 g, 34.7%).
[0632] Synthesis of compound I-61. Compound 61.6 (0.027 g, 0.054
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (2.0 mL) and TFA
(0.5 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with saturated
NaHCO3 solution and extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to provide I-61 (0.006
g, 27.9%). .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.12 (s,
1H), 8.61 (s, 1H), 7.48-7.37 (m, 4H), 7.08-7.03 (m, 3H), 4.26 (s,
2H), 4.12 (s, 2H).
Example 62. Synthesis of
4-((5-(1,4-dioxa-8-azaspiro[4.5]decan-8-yl)pyridin-2-yl)amino)-2-(2,6-dif-
luorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-62
##STR00195##
[0634] Synthesis of compound 62.1. To a solution of 53.1 (0.3 g,
2.11 mmol, 1.0 eq) in DMSO (10 mL) was added
1,4-dioxa-8-azaspiro[4.5]decane (0.30 g, 2.11 mmol, 1.0 eq)
followed by DIPEA (3.63 mL, 21.1 mmol, 10.0 eq). The reaction
mixture was stirred at 100.degree. C. for 2 hours. After
completion, reaction was quenched with water and product was
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain pure 62.1 (0.50 g, 89.3%). MS(ES): m/z 265.27
[M+H].sup.+.
[0635] Synthesis of compound 62.2. To a suspension of 10% Pd/C
(0.150 g) in MeOH (3.5 mL) was added a solution of 62.1 (0.5 g,
1.88 mmol, 1.0 eq) in MeOH (3.5 mL) under nitrogen. Suspension was
purged using H.sub.2 gas for 2 hours. After completion of reaction,
mixture was filtered through celite and washed with MeOH. Solvents
were removed under reduced pressure and the crude was purified by
trituration with n-pentane to provide 62.2 (0.41 g, 92.5%). MS(ES):
m/z 235.29 [M+H].sup.+.
[0636] Synthesis of compound 62.3. To a solution of 52.1 (0.07 g,
0.184 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added 62.2 (0.043
g, 0.184 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.05 g, 0.368 mmol, 2.0
eq). Suspension was degassed for 10 minutes using argon then
Pd.sub.2(dba).sub.3 (0.016 g, 0.018 mmol, 0.1 eq) and Xantphos
(0.021 g, 0.036 mmol, 0.2 eq) were added. After additional aron
purge (5 min), the reaction was stirred at 100.degree. C. for 2
hours. After completion of the reaction, mixture was poured into
water and mixture was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified using column chromatography to furnish 62.3
(0.068 g, 63.8%). MS(ES): m/z 579.60 [M+H].sup.+.
[0637] Synthesis of compound I-62. Compound 62.3 (0.068 g, 0.117
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (2.0 mL) and TFA
(0.3 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured in water, basified with satd.
NaHCO.sub.3 solution and extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude. The crude was purified by column
chromatography to furnish I-62 (0.039 g, 69.3%). MS(ES): m/z 479.49
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.51 (s,
1H), 8.80 (s, 1H), 8.37 (s, 1H), 8.05-8.04 (d, 1H), 7.60-7.53 (m,
1H), 7.49-7.46 (dd, 1H), 7.28-7.22 (m, 2H), 7.15-7.07 (m, 1H), 4.40
(s, 2H), 3.90 (m, 4H), 3.24-3.18 (m, 4H), 1.71-1.69 (t, 4H).
Example 63. Synthesis of
2-(2,6-difluorophenyl)-4-((4-((3aR,6aS)-hexahydro-1H-furo[3,4-c]pyrrole-5-
-carbonyl)phenyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-63
##STR00196##
[0639] Synthesis of compound 63.1. To a solution of 54.2 (0.124 g,
0.668 mmol, 1.0 eq) in THF (3.0 mL) was added Et.sub.3N (0.202 g,
2.0 mmol, 3.0 eq) and (3aR,6aS)-hexahydro-1H-furo[3,4-c]pyrrole
(0.1 g, 0.668 mmol, 1.0 eq) dropwise. The reaction was stirred at
room temperature for 2 hours. After completion of the reaction,
mixture was quenched with satd. NaHCO.sub.3 solution and product
was extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain pure 63.1 (0.09 g, 53.1%). MS(ES): m/z 262.27
[M+H].sup.+.
[0640] Synthesis of compound 63.2. To a suspension of 10% Pd/C
(0.050 g) in MeOH (3.5 mL) was added a solution of 63.1 (0.09 g,
0.343 mmol, 1.0 eq) in MeOH (2.5 mL) under N.sub.2. Suspension was
purged with H.sub.2 gas for 1 hour After completion of the
reaction, mixture was filtered through celite, washed with MeOH.
Obtained filtrate was concentrated under reduced pressure to get
pure 63.2 (0.06 g, 75.3%). MS(ES): m/z 232.28 [M+H].sup.+.
[0641] Synthesis of compound 63.3. To a solution of 52.1 (0.065 g,
0.17 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added 63.2 (0.040 g,
0.171 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.047 g, 0.342 mmol, 2.0
eq). The reaction mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.3 (0.015 g, 0.017 mmol, 0.1 eq) and Xantphos
(0.020 g, 0.034 mmol, 0.2 eq) were added. The reaction was stirred
at 100.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish 63.3 (0.065 g, 66.0%). MS(ES): m/z 576.60 [M+H].sup.+.
[0642] Synthesis of compound I-63. Compound 63.3 (0.065 g, 0.112
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (3.0 mL) and TFA
(0.3 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 and extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude material. The crude was purified by trituration
with n-pentane and Et.sub.2O to get pure I-63 (0.040 g, 74.5%).
MS(ES): m/z 476.48 [M+H].sup.+; NMR (DMSO-d.sub.6, 400 MHz):
.delta. 9.17 (s, 1H), 8.78 (s, 1H), 7.56-7.50 (m, 3H), 7.42-7.40
(d, 2H), 7.24-7.20 (t, 3H), 4.41 (s, 2H), 3.71 (m, 4H), 3.46 (m,
4H), 2.89 (m, 2H).
Example 64. Synthesis of
6-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-4-y-
l)amino)-2-methyl-3,4-dihydroisoquinolin-1(2H)-one, I-64
##STR00197##
[0644] Synthesis of compound 64.2. 2-Methane sulphonic acid (3.1
mL, 47.39 mmol, 10.0 eq) was added to a mixture of 64.1 (1.0 g,
4.74 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (10.0 mL) at 0.degree. C.
Sodium azide (0.62 g, 9.48 mmol, 2.0 eq) was added slowly in
portions. After completion of the addition, mixture was stirred for
additional 12 hours. After completion of reaction, aqueous mixture
of NaOH (20%) was added until the mixture was slightly basic. The
mixture was extracted with CH.sub.2Cl.sub.2. Organic layers were
combined and solvents evaporated under reduced pressure. The crude
material was purified by column chromatography to provide 64.2 (0.5
g, 46.7%). MS(ES): m/z 226.07 [M+H].sup.+.
[0645] Synthesis of compound 64.3. Compound 64.2 (0.5 g, 2.21 mmol,
1.0 eq) was dissolved in DMF (3.5 mL) and NaH (0.076 g, 3.32 mmol,
1.5 eq) was added to the reaction mixture at 0.degree. C. Methyl
iodide (0.47 g, 3.32 mmol, 1.5 eq) was added to the reaction
mixture dropwise at 0.degree. C. The reaction was stirred at
0.degree. C. for 1 hour. After completion of the reaction, the
mixture was quenched with 2N HCl solution and the product was
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by column
chromatography to furnish 64.3 (0.25 g, 47.1%). MS(ES): m/z 240.10
[M+H].sup.+.
[0646] Synthesis of compound 64.4. To a solution of compound 64.3
(0.25 g, 1.04 mmol, 1.0 eq) in toluene (1.0 mL) was added
benzophenonimine (0.21 g, 1.14 mmol, 1.1 eq) and NaOBu.sup.t (0.15
g, 1.56 mmol, 1.5 eq). The mixture was degassed for 10 minutes
using argon, then Pd.sub.2(dba).sub.3 (0.009 g, 0.01 mmol, 0.01 eq)
and BINAP (0.029 g, 0.052 mmol, 0.05 eq) were added. The reaction
was then heated at 100.degree. C. for 8 hours. After completion,
reaction mixture was poured into water and product was extracted
with EtOAc. Organic layers were combined, washed with brine, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. The crude was purified by column
chromatography to provide 64.4 (0.04 g, 21.8%). MS(ES): m/z 176.22
[M+H].sup.+.
[0647] Synthesis of compound 64.5. To a mixture of 52.1 (0.060 g,
0.157 mmol, 1.0 eq) in 1,4-dioxane (1.5 mL) was added 64.4 (0.027
g, 0.157 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.065 g, 0.47 mmol, 3.0
eq). The reaction mixture was degassed with argon for 10 minutes
then Pd.sub.2(dba).sub.3 (0.014 g, 0.015 mmol, 0.1 eq) and Xantphos
(0.018 g, 0.031 mmol, 0.2 eq) were added. Suspension was degassed
again for 5 minutes. The reaction was stirred at 100.degree. C. for
2 hours. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to provide 64.5 (0.038
g, 46.3%). MS(ES): m/z 520.54 [M+H].sup.+.
[0648] Synthesis of compound I-64. The compound 64.5 (0.038 g,
0.073 mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (1.0 mL) and
TFA (0.5 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 solution and product was extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish I-64 (0.023 g, 74.9%). MS(ES): m/z 420.42 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.23 (s, 1H), 8.80 (s,
1H), 7.86-7.84 (d, 1H), 7.56-7.52 (m, 1H), 7.33-7.20 (m, 5H), 4.41
(s, 2H), 3.55-3.51 (t, 2H), 3.00 (s, 3H), 2.99-2.95 (t, 2H).
Example 65. Synthesis of
4-((5-(2,5-dioxa-8-azaspiro[3.4]octan-8-yl)pyridin-2-yl)amino)-2-(2,6-dif-
luorophenyl)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-65
##STR00198## ##STR00199##
[0650] Synthesis of compound 65.2. To a stirred solution of
2-aminoethan-1-ol (1.0 g, 16.37 mmol, 1.0 eq) in CH.sub.2Cl.sub.2
(10.0 mL) at room temperature was added 65.1 (1.29 g, 18.0 mmol,
1.1 eq), AcOH (0.098 g, 1.64 mmol, 0.1 eq) and molecular sieves
(1.0 g). The reaction was stirred at room temperature for 3 hours.
After completion of the reaction, mixture was filtered,
concentrated under reduced pressure. The crude was purified by
column chromatography to provide 65.2 (0.54 g, 33.8%). MS(ES): m/z
115.13 [M+H].sup.+.
[0651] Synthesis of compound 65.3. To a solution of 20.1 (0.5 g,
2.46 mmol, 1.0 eq) in 1,4-dioxane (8.0 mL) were added compound 65.2
(0.283 g, 2.46 mmol, 1.0 eq) and NaOBu.sup.t (0.472 g, 4.92 mmol,
2.0 eq). The reaction mixture was degassed with argon gas for 15
minutes. Then Pd.sub.2(dba).sub.3 (0.023 g, 0.246 mmol, 0.1 eq) and
Devphos (0.193 g, 0.492 mmol, 0.2 eq) were added to the reaction
mixture. The reaction mixture was irradiated in microwave at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was quenched with water and the product was extracted with
EtOAc. Organic layers were combined, washed with brine and
concentrated under reduced pressure to get crude material. The
crude was purified by column chromatography to provide 65.3 (0.165
g, 28.2%). MS(ES): m/z 237.22 [M+H].sup.+.
[0652] Synthesis of compound 65.4. To a suspension of 10% Pd/C
(0.030 g) in MeOH (2.0 mL) was added a solution of 65.3 (0.165 g,
0.695 mmol, 1.0 eq) in MeOH (2.0 mL) under N.sub.2. Suspension was
purged with hydrogen gas for 1 hour. After completion of the
reaction, mixture was filtered through celite, washed with MeOH.
Obtained filtrate was concentrated under reduced pressure and
triturated with pentane to furnish 65.4 (0.14 g, 97.1%). MS(ES):
m/z 207.23 [M+H].sup.+.
[0653] Synthesis of compound 65.6. To a suspension of 10% Pd/C
(0.030 g) in MeOH (2.0 mL) was added a solution of 65.3 (0.165 g,
0.695 mmol, 1.0 eq) in MeOH (2.0 mL) under nitrogen atmosphere.
Suspension was purged with H.sub.2 gas for 1 hour. After completion
of the reaction, mixture was filtered through celite, washed with
MeOH. Solvents were removed under a reduced pressure and the crude
was triturated with pentane to get pure 65.6 (0.14 g, 97.1%).
MS(ES): m/z 207.23 [M+H].sup.+.
[0654] Synthesis of compound I-65. Compound 65.6 (0.04 g, 0.07
mmol, 1.0 eq) was dissolved in THF/MeOH mixture (4:1) and LiOH
(0.011 g, 0.282 mmol, 4.0 eq) in water (1.0 mL) was added. The
reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 solution and product was extracted with
EtOAc. Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by trituration with
Et.sub.2O to get pure I-65 (0.022 g, 68.9%). MS(ES): m/z 451.43
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.54 (s,
1H), 8.83 (s, 1H), 8.38 (s, 1H), 8.06 (d, 1H), 7.58-7.55 (m, 2H),
7.27-7.22 (m, 3H), 5.04-5.02 (d, 2H), 4.69-4.67 (d, 2H), 4.41 (s,
2H), 4.05-4.03 (m, 2H), 3.47-3.44 (m, 2H).
Example 66. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(1,1,1,3,3,3-hexafluoro-2-hydroxy-propan-2-y-
l)phenyl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-66
##STR00200##
[0656] Synthesis of compound 66.1. To a mixture of 52.1 (0.070 g,
0.184 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added
2-(4-aminophenyl)-1,1,1,3,3,3-hexafluoropropan-2-ol (0.048 g, 0.184
mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.051 g, 0.368 mmol, 2.0 eq).
Suspension was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.017 g, 0.018 mmol, 0.1 eq) and Xantphos
(0.021 g, 0.036 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 66.1 (0.064
g, 57.7%). MS(ES): m/z 603.47 [M+H].sup.+.
[0657] Synthesis of compound I-66. To a solution of 66.1 (0.064 g,
0.106 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (1.5 mL) was added TFA (0.3
mL) at 0.degree. C. Reaction mixture was stirred at room
temperature for 1 hour. After completion of the reaction, mixture
was poured into water, basified with satd. NaHCO.sub.3 and
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude which was purified by trituration with
Et.sub.2O to furnish I-66 (0.038 g, 71.8%). MS(ES): m/z 503.35
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.22 (s,
1H), 8.79 (s, 1H), 8.71 (s, 1H), 7.69-7.66 (d, 2H), 7.58-7.51 (m,
3H), 7.24-7.19 (m, 3H), 4.41 (s, 2H).
Example 67. Synthesis of
2-(4-((2-(2,6-difluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin--
4-yl)amino)phenyl)-N-ethyl-2-methylpropanamide, I-67
##STR00201##
[0659] Synthesis of compound 67.1. To a solution of NaOBu.sup.t
(1.45 g, 15.0 mmol, 1.05 eq) in DMF (50 mL) at 0.degree. C., was
added 39.1 (3.0 g, 14.3 mmol, 1.0 eq). After 5 minutes of stirring
Mel (2.12 g, 15.0 mmol, 1.05 eq) was added dropwise and the
reaction mixture was stirred at 30 minutes at 0.degree. C. After 5
minutes second portion of NaOBu.sup.t (1.45 g, 15.0 mmol, 1.05 eq)
was added at 0.degree. C. and the reaction was stirred for 5
minutes. Finally second portion of Mel (2.12 g, 15.0 mmol, 1.05 eq)
was added dropwise and the reaction was stirred at 0.degree. C. for
30 minutes. After completion, reaction was quenched with dilute
AcOH and the product was extracted with EtOAc. Organic layers were
separated, combined, washed with brine solution, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to get
crude which was purified by column chromatography to furnish 67.1
(2.0 g, 58.8%). MS (ES): m/z 237.26 [M+H].sup.+.
[0660] Synthesis of compound 67.2. To a solution of 67.1 (0.4 g,
1.68 mmol, 1.0 eq) in THF (4.0 mL) was added ethyl amine (1.68 mL,
3.37 mmol, 2.0 eq) and DIPEA (0.6 mL, 3.36 mmol, 2.0 eq). The
reaction was cooled to at 0.degree. C. Trimethyl aluminium (4.2 mL,
8.4 mmol, 5.0 eq) was added dropwise at 0.degree. C. to the mixture
then the reaction was stirred at reflux temperature for 6 hours.
After completion, reaction mixture was quenched with chilled
NaHCO.sub.3 solution and the product was extracted with EtOAc.
Organic layer was separated, washed with brine solution and
concentrated under reduced pressure to get crude material. The
crude was purified by column chromatography to provide 67.2 (0.24
g, 61.0%). MS(ES): m/z 236.27 [M+H].sup.+.
[0661] Synthesis of compound 67.3. To a suspension of 10% Pd/C
(0.05 g) in MeOH (2.0 mL) was added a solution of 67.2 (0.243 g,
1.028 mmol, 1.0 eq) in MeOH (2.0 mL) under nitrogen. Hydrogen gas
was bubbled into the reaction mixture for 1 hour at room
temperature. After completion of the reaction, mixture was filtered
through celite, washed with MeOH and obtained filtrate was
concentrated under reduced pressure then triturated with pentane to
provide pure 67.3 (0.19 g, 89.6%). MS(ES): m/z 206.29
[M+H].sup.+.
[0662] Synthesis of compound 67.4. To a mixture of 67.3 (0.1 g,
0.26 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added compound 67.3
(0.06 g, 0.28 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.090 g, 0.65
mmol, 2.5 eq). Reaction mixture was degassed for 10 minutes using
argon then Pd.sub.2(dba).sub.3 (0.024 g, 0.026 mmol, 0.1 eq) and
Xanthpos (0.03 g, 0.052 mmol, 0.2 eq) were added, and again
degassed for 5 minutes. The reaction was stirred at 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to provide 67.4 (0.127 g, 87.8%).
MS(ES): m/z 550.61 [M+H].sup.+.
[0663] Synthesis of compound I-67. To a solution of 67.4 (0.127 g,
0.23 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) TFA (0.5 mL) was
added. The reaction mixture was stirred at room temperature for 1
hour. After completion of the reaction, mixture was basified with
satd. saturated NaHCO.sub.3 solution and extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography and trituration
with Et.sub.2O to get pure I-67 (0.069 g, 66.4%). MS(ES): m/z
450.49 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta.
8.96 (s, 1H), 8.71 (s, 1H), 7.52 (m, 1H), 7.37-7.31 (m, 5H),
7.22-7.18 (t, 2H), 7.02 (s, 1H), 4.38 (s, 2H), 3.05-3.02 (q, 2H),
1.42 (s, 6H), 0.95-0.92 (t, 3H).
Example 68. Synthesis of
4-(benzo[d][1,3]dioxol-5-ylamino)-2-(2,6-difluorophenyl)-6,7-dihydro-5H-p-
yrrolo[3,4-b]pyridin-5-one, I-68
##STR00202##
[0665] Synthesis of compound 68.1. To a mixture of 52.1 (0.105 g,
0.394 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added
benzo[d][1,3]dioxol-5-amine (0.054 g, 0.394 mmol, 1.0 eq) and
K.sub.2CO.sub.3 (0.11 g, 0.79 mmol, 2.0 eq). The reaction was
degassed using argon, then Pd.sub.2(dba).sub.3 (0.036 g, 0.039
mmol, 0.1 eq) and Xantphos (0.045 g, 0.078 mmol, 0.2 eq) were
added. The reaction was stirred at 100.degree. C. for 2 hours.
After completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to provide 68.1 (0.105 g, 55.4%).
MS(ES): m/z 481.46 [M+H].sup.+.
[0666] Synthesis of compound I-68. To a solution of 68.1 (0.10 g,
0.207 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was added TFA (0.3
mL), dropwise at 0.degree. C. under nitrogen. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 solution and extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by trituration with pentane to get pure I-68
(0.075 g, 94.7%). MS(ES): m/z 381.34 [M+H].sup.+; NMR
(DMSO-d.sub.6, 400 MHz): .delta. 8.74 (s, 1H), 8.65 (s, 1H),
7.53-7.49 (m, 1H), 7.21-7.17 (t, 2H), 6.98-6.92 (m, 2H), 6.82-6.79
(m, 2H), 6.04 (s, 2H), 4.37 (s, 2H).
Example 69. Synthesis of
4-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)amino)-2-(2,6-difluoro-phenyl)-6-
,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-69
##STR00203## ##STR00204##
[0668] Synthesis of compound 69.2. To a suspension of 10% Pd/C
(0.05 g) in MeOH (5.0 mL) was added a solution of 69.1 (0.5 g, 2.46
mmol, 1.0 eq) in MeOH (3.0 mL) under nitrogen. Reaction was purged
with H.sub.2 gas for 2 hours. After completion of the reaction,
mixture was filtered through celite and washed with MeOH. Obtained
filtrate was concentrated under reduced pressure to get crude which
was purified by trituration with n-hexane to provide 69.2 (0.31 g,
72.5%). MS(ES): m/z 173.12 [M+H].sup.+.
[0669] Synthesis of compound 65.5. A solution of NaH (0.01, 3.57
mmol, 2.0 eq) in THF (10 mL) was cooled to 0.degree. C. Compound
69.3 (0.5 g, 1.78 mmol, 1.0 eq) was added and stirred at 0.degree.
C. Methyl pivaloyl chloride (0.321 g, 2.14 mmol, 1.2 eq) was added
dropwise and the reaction was stirred at room temperature for 4
hours. After completion, the reaction was quenched with water.
Product was extracted with EtOAc and washed with NaHCO.sub.3
solution. Organic layer was separated, washed with brine, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
get crude. The crude was purified by column chromatography to
furnish 65.5 (0.34 g, 58.4%). MS(ES): m/z 326.62 [M+H].sup.+.
[0670] Synthesis of compound 69.4. To a solution of compound 65.5
(0.12 g, 0.225 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added
compound 69.2 (0.039 g, 0.223 mmol, 1.0 eq) and K.sub.2CO.sub.3
(0.077 g, 0.564 mmol, 2.5 eq). Suspension was degassed for 10
minutes using argon, then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol,
0.1 eq) and Xantphos (0.026 g, 0.045 mmol, 0.2 eq) were added and
again degassed for 5 minutes. The reaction was stirred at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide 69.4
(0.12 g, 69.3%). MS(ES): m/z 463.28 [M+H].sup.+.
[0671] Synthesis of compound I-69. To a solution of compound 69.4
(0.12 g, 0.25 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was added
TFA (1.5 mL). The reaction was stirred at room temperature for 1
hour. After completion of the reaction, mixture was poured into
water, basified with satd. NaHCO.sub.3 solution and product was
extracted with ethyl acetate. Organic layer was combined, washed
with brine solution, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography and trituration to furnish I-69 (0.037 g, 34.8%).
MS(ES): m/z 417.32 [M+H].sup.+; NMR (DMSO-d.sub.6, 400 MHz):
.delta. 8.98 (s, 1H), 8.71 (s, 1H), 7.54-7.41 (m, 3H), 7.21-7.17
(m, 3H), 6.97 (s, 1H), 4.39 (s, 2H).
Example 70. Synthesis of
2-(2,6-difluorophenyl)-4-((3,3-dimethyl-2,3-dihydrobenzofuran-6-yl)amino)-
-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-70
##STR00205##
[0673] Synthesis of compound 70.1. To a mixture of 52.1 (0.1 g,
0.26 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added
3,3-dimethyl-2,3-dihydrobenzofuran-6-amine (0.042 g, 0.262 mmol,
1.0 eq) and K.sub.2CO.sub.3 (0.09 g, 0.657 mmol, 2.5 eq). The
reaction mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.024 g, 0.026 mmol, 0.1 eq) and Xantphos
(0.030 g, 0.052 mmol, 0.2 eq) were added. Suspension was then
degassed for additional 5 minutes. The reaction was then heated at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine solution, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. This crude was purified by column
chromatography to furnish 70.1 (0.076 g, 57.0%). MS(ES): m/z 507.54
[M+H].sup.+.
[0674] Synthesis of compound I-70. A solution of 70.1 (0.076 g,
0.149 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was added TFA (1.0
mL). The reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 solution and product was extracted with
EtOAc. Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude. The crude was purified by column chromatography and
trituration to furnish I-70 (0.05 g, 82.0%). MS(ES): m/z 407.42
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 8.88 (s,
1H), 8.69 (s, 1H), 7.56-7.49 (m, 1H), 7.23-7.18 (m, 3H), 7.00 (s,
1H), 6.85-6.82 (dd, 1H), 6.78-6.77 (d, 1H), 4.37 (s, 2H) 4.23 (s,
2H), 1.28 (s, 6H).
Example 71. Synthesis of
2-(2,6-difluorophenyl)-4-((2,2-dimethyl-2,3-dihydrobenzofuran-6-yl)amino)-
-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-71
##STR00206## ##STR00207##
[0676] Synthesis of compound 71.2. To a mixture of 71.1 (2.13 g,
12.3 mmol, 1.0 eq) and K.sub.2CO.sub.3 (3.4 g, 24.6 mmol, 2.0 eq)
in DMF (10 mL) at room temperature, was added
3-bromo-2-methylprop-1-ene (2.0 g, 14.8 mmol, 1.2 eq). Reaction
mixture was stirred at 80.degree. C. for 3 hours. After completion
of the reaction, mixture was poured into water and extracted with
EtOAc. Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to provide
71.2 (2.9 g, 99.0%). MS(ES): m/z 227.10 [M+H].sup.+.
[0677] Synthesis of compound 71.3. A solution of 71.2 (2.9 g, 12.8
mmol, 1.0 eq) in N,N-diethyl aniline (10 mL) was stirred under
argon at 210-220.degree. C. for 12 hours. After completion of the
reaction, mixture was cooled to room temperature, acidified with 1N
HCl extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by column
chromatography to provide 71.3 (0.55 g, 18.9%). MS(ES): m/z 227.10
[M+H].sup.+.
[0678] Synthesis of compound 71.4. To a solution of compound 71.3
(0.55 g, 2.43 mmol, 1.0 eq) in dry toluene (6.0 mL), p-toluene
sulphonic acid (46 mL) was added. Reaction mixture was stirred at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was cooled to room temperature and basified with 1N NaOH
solution and extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified by column
chromatography to provide 71.4 (0.45 g, 81.8%). MS(ES): m/z 227.10
[M+H].sup.+.
[0679] Synthesis of compound 71.5. To a solution of 71.4 (0.25 g,
1.10 mmol, 1.0 eq) in THF (5.0 mL) was added CyJohnphos (0.077 g,
0.22 mmol, 0.2 eq) and Pd.sub.2(dba).sub.3 (0.1 g, 0.11 mmol, 0.1
eq). Suspension was degassed with argon, LHMDS (0.919 g, 5.50 mmol,
5.0 eq) was added and the mixture was stirred at 100.degree. C. for
2 hours. After completion of the reaction, mixture was poured into
dilute HCl and extracted with EtOAc. Aqueous fractions were
basified with saturated NaHCO.sub.3 solution and extracted with
EtOAc. Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude. The crude was purified by column chromatography to provide
71.5 (0.087 g, 48.4%). MS(ES): m/z 163.22 [M+H].sup.+.
[0680] Synthesis of compound 71.6. To a mixture of 52.1 (0.11 g,
0.29 mmol, 1.15 eq) in 1,4-dioxane (2.5 mL) was added compound 1.4
(0.042 g, 0.251 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.069 g, 0.502
mmol, 2.0 eq). The reaction mixture was degassed for 10 minutes
using argon, then Pd.sub.2(dba).sub.3 (0.023 g, 0.021 mmol, 0.1 eq)
and Xantphos (0.029 g, 0.050 mmol, 0.2 eq) were added, and again
degassed for 5 minutes. Reaction was stirred at 100.degree. C. for
2 hours. After completion of the reaction, mixture was poured into
water and extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to furnish 71.6 (0.095 g, 64.8%).
MS(ES): m/z 507.54 [M+H].sup.+.
[0681] Synthesis of compound I-71. To a solution of compound 71.6
(0.095 g, 0.187 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was
added TFA (0.5 mL). The reaction was stirred at room temperature
for 1 hour. After completion of the reaction, mixture was poured
into water, basified with satd. NaHCO.sub.3 and extracted with
EtOAc. Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to provide I-71
(0.041 g, 53.8%). MS(ES): m/z 407.42 [M+H].sup.+; .sup.1H NMR
(CDCl.sub.3, 400 MHz): .delta. 8.67 (s, 1H), 7.39-7.31 (m, 1H),
7.14-7.10 (m, 2H), 7.02-6.96 (m, 2H), 6.77-6.74 (dd, 1H), 6.71-6.70
(d, 1H), 5.98 (s, 1H), 4.50 (s, 2H), 3.01 (s, 2H), 1.50 (s,
6H).
Example 72. Synthesis of
2-(2,6-difluorophenyl)-4-((4-oxochroman-7-yl)amino)-6,7-dihydro-5H-pyrrol-
o[3,4-b]pyridin-5-one, I-72
##STR00208##
[0683] Synthesis of compound 72.2. To a solution of 72.1 (1.0 g,
6.7 mmol, 1.0 eq) in concentrated H.sub.2SO.sub.4 (20 mL) was added
a solution of KNO.sub.3 (0.75 g, 7.4 mmol, 1.1 eq) in sulphuric
acid (13 mL) at 0.degree. C. The reaction was stirred at 0.degree.
C. for 1 hour. After completion of the reaction, mixture was poured
into ice-water. White precipitate was filtered off, washed with
water and dried. Solids were triturated with EtOAc, filtered and
dried under vacuum to get 72.1 (1.0 g, 76.7%). MS(ES): m/z 193.16
[M+H].sup.+.
[0684] Synthesis of compound 72.3. To a suspension of compound 72.1
(0.1 g, 0.5 mmol, 1.0 eq) in MeOH (4.0 mL) and water (1.0 mL) was
added NH.sub.4Cl (0.26 g, 5.0 mmol, 10 eq) and iron powder (0.28 g,
5 mmol, 10 eq). The reaction was stirred at reflux for 2 hours.
After completion of the reaction, mixture was partioned between
water and EtOAC, filtered through celite. Organic layer was dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude. The crude was purified by column chromatography to
provide 72.3 (0.065 g, 76.9%). MS(ES): m/z 163.18 [M+H].sup.+.
[0685] Synthesis of compound 72.4. To a mixture of 52.1 (0.1 g,
0.262 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added compound 72.3
(0.051 g, 0.315 mmol, 1.2 eq) and K.sub.2CO.sub.3 (0.054 g, 0.363
mmol, 1.5 eq). Mixture was degassed for 10 minutes using argon,
then Pd.sub.2(dba).sub.3 (0.024 g, 0.026 mmol, 0.1 eq) and Xantphos
(0.03 g, 0.052 mmol, 0.2 eq) were added and again degassed for 5
minutes. The reaction was stirred at 100.degree. C. for 2 hours.
After completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to furnish 72.4 (0.10 g, 77.3%).
MS(ES): m/z 507.49 [M+H].sup.+.
[0686] Synthesis of compound I-72. To a solution of 72.4 (0.103 g,
0.202 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was added TFA (1.0
mL). Reaction mixture was stirred at room temperature for 1 hour.
After completion of the reaction, mixture was poured into water,
basified with satd. NaHCO.sub.3 and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
the crude which was purified by column chromatography to furnish
I-72 (0.070 g, 84.7%). MS(ES): m/z 407.38 [M+H].sup.+; .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 8.89 (s, 1H), 8.67 (s, 1H),
7.67-7.66 (d, 1H), 7.57-7.47 (m, 2H), 7.21-7.17 (t, 2H), 7.11-7.08
(d, 1H), 6.76 (s, 1H), 4.56-4.53 (t, 2H), 4.38 (s, 2H), 2.81-2.78
(t, 2H).
Example 73. Synthesis of
2-(2,6-difluorophenyl)-4-((6-((3aR,6aS)-tetrahydro-1H-furo[3,4-c]pyrrol-5-
(3H)-yl)pyridin-3-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-73
##STR00209##
[0688] Synthesis of compound 73.2. To a stirred solution of 73.1
(0.19 g, 1.336 mmol, 1.0 eq) and
(3aR,6aS)-hexahydro-1H-furo[3,4-c]pyrrole (0.2 g, 1.34 mmol, 1.0
eq) in dry DMSO (5.0 mL), was added DIPEA (2.37 mL, 13.36 mmol,
10.0 eq). The reaction was stirred at 110.degree. C. for 2 hours.
After completion of the reaction, mixture was poured into water and
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by
trituration to afford 73.2 (0.24 g, 76.3%). MS(ES): m/z 235.24
[M+H].sup.+.
[0689] Synthesis of compound 73.3. To a suspension of 10% Pd/C
(0.15 g) in MeOH (2.5 mL) was added a solution of compound 73.2
(0.24 g, 1.02 mmol, 1.0 eq) in MeOH (2.5 mL) under nitrogen.
H.sub.2 gas was bubbled into the reaction mixture for 2 hours.
After completion of the reaction, mixture was filtered through
celite, washed with MeOH. Obtained filtrate was concentrated under
reduced pressure to get crude which was purified by column
chromatography to furnish 73.3 (0.15 g, 71.6%). MS(ES): m/z 205.26
[M+H].sup.+.
[0690] Synthesis of compound 73.4. To a mixture of 52.1 (0.1 g,
0.263 mmol, 1.2 eq) in 1,4-dioxane (3.0 mL) was added compound 73.3
(0.045 g, 0.219 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.06 g, 0.438
mmol, 2.0 eq). The reaction was degassed for 10 minutes using
argon, then Pd.sub.2(dba).sub.3 (0.02 g, 0.021 mmol, 0.1 eq) and
Xantphos (0.025 g, 0.043 mmol, 0.2 eq) were added. The reaction was
stirred at 100.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into the water and product was
extracted with EtOAc. Organic layers were combined, washed with
brine solution, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude material which was purified by
column chromatography to furnish 73.4 (0.1 g, 69.3%). MS(ES): m/z
549.58 [M+H].sup.+.
[0691] Synthesis of compound I-73. To a solution of compound 73.4
(0.1 g, 0.18 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was added
TFA (0.4 mL). The reaction was stirred at room temperature for 1
hour. After completion of the reaction, mixture was poured into
water, basified with satd. NaHCO.sub.3 solution and extracted with
EtOAc. Organic layer were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material which was purified by trituration with n-pentane and
Et.sub.2O to get pure I-73 (0.055 g, 67.3%). MS(ES): m/z 449.46
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 8.61-8.59
(d, 1H), 8.08-8.07 (d, 1H), 7.53-7.46 (m, 2H), 7.19-7.15 (t, 2H),
6.56-6.53 (m, 2H), 4.36 (s, 2H), 3.86-3.82 (m, 2H), 3.56-3.51 (m,
4H), 3.33-3.32 (m, 2H), 3.00 (m, 2H).
Example 74. Synthesis of
3-fluoro-2-(5-oxo-4-((6-((3aR,6aS)-tetrahydro-1H-furo[3,4-c]pyrrol-5(3H)--
yl)pyridin-3-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitr-
ile, I-74
##STR00210##
[0693] Synthesis of compound 74.2. To a mixture of 74.1 (0.08 g,
0.206 mmol, 1.2 eq) in 1,4-dioxane (2.5 mL) was added 73.3 (0.035
g, 0.172 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.048 g, 0.344 mmol,
2.0 eq). The reaction mixture was degassed for 10 minutes using
argon, then Pd.sub.2(dba).sub.3 (0.016 g, 0.017 mmol, 0.1 eq) and
Xantphos (0.02 g, 0.034 mmol, 0.2 eq) were added and again degassed
for 5 minutes. The reaction was stirred at 100.degree. C. for 2
hours. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude which was
purified by column chromatography to furnish 74.2 (0.075 g, 65.3%).
MS(ES): m/z 556.60 [M+H].sup.+.
[0694] Synthesis of compound I-74. A solution of compound 74.3
(0.075 g, 0.134 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was
added TFA (0.4 mL). The mixture was stirred at room temperature for
1 hour. After completion of the reaction, mixture was poured into
water, basified with satd. NaHCO.sub.3 and extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by trituration with n-hexane
and Et.sub.2O to provide (0.03 g, 48.8%). MS(ES): m/z 456.48
[M+H].sup.+; .sup.1H NMR (MeOD, 400 MHz): .delta. 8.10 (d, 1H),
7.72-7.55 (m, 4H), 6.75 (s, 1H), 6.67-6.65 (d, 1H), 4.48 (s, 2H),
4.00-3.96 (m, 2H), 3.72-3.65 (m, 4H), 3.44-3.43 (m, 2H), 3.15-3.12
(m, 2H).
Example 75. Synthesis of
2-(4-((5-(6-azaspiro[2.5]octan-6-yl)pyridin-2-yl)amino)-5-oxo-6,7-dihydro-
-5H-pyrrolo[3,4-b]pyridin-2-yl)-3-fluorobenzonitrile, I-75
##STR00211##
[0696] Synthesis of compound 75.1. To a mixture of 74.1 (0.075 g,
0.193 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added compound 20.3
(0.043 g, 0.212 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.080 g, 0.579
mmol, 3.0 eq). The mixture was degassed with argon then
Pd.sub.2(dba).sub.3 (0.018 g, 0.019 mmol, 0.1 eq) and Xantphos
(0.022 g, 0.039 mmol, 0.2 eq) were added, again degassed for 5 min.
The reaction was then heated at 100.degree. C. for 0.5 h. After
completion of the reaction, mixture was poured into water and
extracted with EtOAc. Organic layers were combined, washed with
brine solution, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain the crude which was purified by column
chromatography to provide 75.1 (0.05 g, 46.6%). MS(ES): m/z 555.6
[M+H].sup.+.
[0697] Synthesis of compound I-75. A solution of 75.1 (0.05 g, 0.09
mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (1.0 mL) was added TFA (0.2 mL).
The mixture was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 solution and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish I-75
(0.04 g, 97.6%). MS(ES): m/z 455.57 [M+H].sup.+; .sup.1H NMR
(CDCl.sub.3, 400 MHz): .delta. 9.41 (s, 1H), 8.65-8.64 (d, 1H),
8.07-8.06 (d, 1H), 7.64-7.63 (d, 1H), 7.55-7.43 (m, 2H), 7.35-7.32
(dd, 1H), 6.94-6.92 (d, 1H), 6.19 (s, 1H), 4.55 (s, 2H), 3.23-3.20
(t, 4H), 1.56-1.53 (t, 4H), 0.48 (s, 4H).
Example 76. Synthesis of
3-fluoro-2-(5-oxo-4-((5-((3aR,6aS)-tetrahydro-1H-furo[3,4-c]pyrrol-5(3H)--
yl)pyridin-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitr-
ile, I-76
##STR00212##
[0699] Synthesis of compound 76.1. To a mixture of 74.1 (0.1 g,
0.258 mmol, 1.0 eq) in 1,4-dioxane (3.0 mL) was added 59.2 (0.052
g, 0.258 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.089 g, 0.645 mmol,
2.5 eq). The reaction mixture was degassed for 10 minutes using
argon then Pd.sub.2(dba).sub.3 (0.023 g, 0.025 mmol, 0.1 eq) and
Xantphos (0.029 g, 0.051 mmol, 0.2 eq) were added, and again
degassed for 5 minutes. The reaction was stirred at 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine solution, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
get pure 76.1 (0.075 g, 52.3%). MS(ES): m/z 556.60 [M+H].sup.+.
[0700] Synthesis of compound I-76. Compound 76.1 (0.075 g, 0.134
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (2.0 mL) and TFA
(0.3 mL) was added. The reaction was stirred at room temperature
for 1 hour. After completion of the reaction, mixture was poured
into water, basified with satd. NaHCO.sub.3 solution and product
was extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by column
chromatography to get pure I-76 (0.027 g, 43.9%). MS(ES): m/z
456.48 [M+H].sup.+; .sup.1H NMR (CDCl.sub.3, 400 MHz): .delta. 9.48
(s, 1H), 8.84 (s, 1H), 8.39 (s, 1H), 7.88-7.86 (dd, 1H), 7.80-7.71
(m, 3H), 7.18-7.11 (m, 2H), 4.41 (s, 2H), 3.87-3.83 (dd, 2H),
3.53-3.50 (dd, 2H), 3.34-3.28 (m, 2H), 3.20-3.17 (dd, 2H), 2.98 (m,
H).
Example 77. Synthesis of
2-(2,6-difluorophenyl)-4-((3-oxo-3H-spiro[benzofuran-2,1'-cyclopropan]-6--
yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-61
##STR00213## ##STR00214##
[0702] Synthesis of 77.2. Compound 77.1 (2.0 g, 12.0 mmol, 1.0 eq)
in EtOAc (30 mL) was added to a cooled solution of NaHCO.sub.3
(1.38 g, 16.4 mmol, 1.37 eq) in water (15 mL). The reaction was
stirred for 10 minutes. Acetyl chloride (1.28 g, 16.4 mmol, 1.37
eq) was added to the mixture over 15 minutes and the reaction was
stirred at room temperature for 2 hours. After completion of the
reaction, mixture was quenched with water and extracted with EtOAc.
Organic layers were combined, washed with satd. NaHCO.sub.3, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. The crude was purified by trituration with
EtOAc and n-hexane to furnish 77.2 (2.2 g, 87.9%). MS(ES): m/z
209.20 [M+H].sup.+.
[0703] Synthesis of 77.3. To a solution of compound 77.2 (2.2 g,
10.5 mmol, 1.0 eq) in acetone (5.5 mL) was added K.sub.2CO.sub.3
(1.8 g, 13.1 mmol, 1.25 eq) and 3-bromodihydrofuran-2(3H)-one (2.3
g, 14 mmol, 1.33 eq). The reaction was stirred at 60.degree. C. for
two days. After completion of the reaction, mixture was cooled to
room temperature and the product was filtered through celite. The
celite bed was washed with acetone and the filtrate was
concentrated under reduced pressure to get crude material. The
crude was purified by column chromatography to furnish 77.3 (0.70
g, 22.7%). MS(ES): m/z 294.28 [M+H].sup.+.
[0704] Synthesis of 77.4. To the mixture of 77.3 (0.5 g, 1.7 mmol,
1.0 eq) and Ac.sub.2O (7.5 mL) was added Et.sub.3N (1.5 mL).
Reaction was stirred at reflux for 12 hours. After completion of
the reaction, mixture was quenched with water and product was
extracted with EtOAc. Organic layers were combined, washed with
satd. NaHCO.sub.3 and brine solutions, dried over Na.sub.2SO.sub.4
and concentrated under reduced pressure to obtain crude material.
The crude was purified by column chromatography to furnish 77.4
(0.21 g, 47.2%). MS(ES): m/z 262.23 [M+H].sup.+.
[0705] Synthesis of 77.5. To a solution of 77.4 (0.2 g, 0.76 mmol,
1.0 veq) in DMSO (0.5 mL) was added NaCl (0.009 g, 0.167 mmol, 0.22
eq). Reaction mixture was heated to 150.degree. C. for 1 hour.
After completion of the reaction, mixture was quenched with water
and product was extracted with EtOAc. Organic layers were combined,
washed with satd. NaHCO.sub.3 and brine solutions, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by trituration with n-hexane
to provide pure 77.5 (0.115 g, 69.2%). MS(ES): m/z 217.22
[M+H].sup.+.
[0706] Synthesis of 77.6. To a solution of 77.5 (0.1 g, 0.46 mmol,
1.0 eq) in MeOH (2.0 mL) and was added KOH (0.077 g, 1.38 mmol, 3.0
eq). The reaction mixture was stirred at 65.degree. C. for 2 hours.
After completion of the reaction, mixture was quenched with water
and product was extracted with EtOAc. Organic layers were combined
washed with satd. NaHCO.sub.3 and brine solutions, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by trituration with n-hexane to get pure
77.6 (0.074 g, 91.8%). MS(ES): m/z 175.19 [M+H].sup.+.
[0707] Synthesis of 77.7. To a mixture of 52.1 (0.085 g, 0.22 mmol,
1.0 eq) in 1,4-dioxane (2.0 mL) was added compound 77.6 (0.039 g,
0.22 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.06 g, 0.44 mmol, 2.0 eq).
The reaction mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.022 g, 0.022 mmol, 0.1 eq) and Xantphos
(0.025 g, 0.044 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes. The reaction was stirred at 100.degree.
C. for 2 hours. After completion of the reaction, mixture was
poured into water and product was extracted with EtOAc. Organic
layers were combined, washed with brine solution, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude which was purified by column chromatography to furnish 77.7
(0.081 g, 69.9%). MS(ES): m/z 519.50 [M+H].sup.+.
[0708] Synthesis of I-77. To a solution of compound 77.7 (0.081 g,
0.153 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (1.0 mL) was added TFA (0.5
mL). The reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 solution and extracted with EtOAc. Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by trituration with w-pentane to furnish I-77 (0.049 g,
75.9%). MS(ES): m/z 419.39 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6,
400 MHz): .delta. 9.53 (s, 1H), 8.88 (s, 1H), 7.67-7.65 (d, 1H),
7.58-7.50 (m, 2H), 7.32 (d, 1H), 7.26-7.16 (m, 3H), 4.45 (s, 2H),
1.76-1.73 (q, 2H), 1.42-1.39 (q, 2H).
Example 78. Synthesis of
2-(2,6-difluorophenyl)-4-((5-(1,1,1-trifluoro-2-hydroxypropan-2-yl)pyridi-
n-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-78
##STR00215##
[0710] Synthesis of compound 78.2. Compound 78.1 (1.0 g, 6.0 mmol,
1.0 eq) was dissolved in THF (10.0 mL) and cooled to 0.degree. C.
Trimethyl (trifluoromethyl) silane (1.27 g, 9.0 mmol, 1.5 eq) and
TBAF (0.120 g, 1.2 mmol, 0.02 eq) were added to the mixture.
Reaction was stirred at room temperature for 24 hours. After
completion of the reaction, mixture was quenched with 2N HCl
solution and extracted with EtOAc. Organic layers were combined,
washed with brine dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to provide 78.2 (0.95 g, 65.5%).
MS(ES): m/z 225.60 [M+H].sup.+.
[0711] Synthesis of compound 78.3. To a solution of 78.2 (0.45 g,
1.99 mmol, 1.0 eq) in THF (5.0 mL)
(2-biphenyl)dicyclohexylphosphine (0.14 g, 0.4 mmol, 0.2 eq) and
Pd2(dba)3 (0.182 g, 0.2 mmol, 0.1 eq) were added. The reaction was
degassed with argon for 30 minutes. LHMDS (12 mmol, 6.0 eq) was
added and the reaction was stirred at reflux temperature for 6
hours. After completion of the reaction, mixture was quenched with
cold HCl solution and extracted with EtOAc. Aqueous layer were
combined, basified with NaHCO.sub.3, and extracted with EtOAc.
Organic layer was washed with water, brine and dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude. The crude was purified by trituration with Et.sub.2O to
furnish 78.3 (0.52 g, 99.0%). MS(ES): m/z 206.17 [M+H].sup.+.
[0712] Synthesis of compound 78.4. To a mixture of 53.1 (0.250 g,
0.65 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added 78.3 (0.135 g,
0.65 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.180 g, 1.3 mmol, 2.0 eq).
The reaction mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.060 g, 0.065 mmol, 0.1 eq) and Xantphos
(0.075 g, 0.13 mmol, 0.2 eq) were added, and again degassed for 5
minutes. The reaction was stirred at 100.degree. C. for 2 hours.
After completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to furnish 78.4 (0.23 g, 63.6%).
MS(ES): m/z 550.49 [M+H].sup.+.
[0713] Synthesis of compound I-78. To a solution of compound 78.4
(0.21 g, 0.381 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was added
TFA (0.5 mL). The reaction mixture was stirred at room temperature
for 1 hour. After completion of the reaction, mixture was poured
into water, basified with satd. NaHCO.sub.3 solution and product
was extracted with EtOAc. Organic layers were combined, washed with
brine solution, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by trituration
to furnish I-78 (0.17 g, 98.9%). MS(ES): m/z 450.37 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.83 (s, 1H), 8.93 (s,
1H), 8.62 (s, 1H), 8.51 (d, 1H), 7.95-7.93 (t, 1H), 7.60-7.56 (m,
1H), 7.29-7.20 (m, 3H), 6.74 (s, 1H), 4.45 (s, 2H), 1.70 (s,
3H).
Example 79. Synthesis of
2-(4-((6-(4-oxa-7-azaspiro[2.5]octan-7-yl)pyridin-3-yl)amino)-5-oxo-6,7-d-
ihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)-3-fluorobenzonitrile,
I-79
##STR00216##
[0715] Synthesis of compound 79.2. To a mixture 79.1 (0.019 g,
0.121 mmol, 1.0 eq) in EtOAc (2.0 mL) was added
4-oxa-7-azaspiro[2.5]octane (0.02 g, 0.133 mmol, 1.1 eq) and
Et.sub.3N (0.031 g, 0.29 mmol, 2.4 eq). The reaction was stirred at
80.degree. C. for 3 hours. After completion of the reaction,
solvent was evaporated under reduced pressure. The residue was
triturated with 0.2% dichloromethane in hexane to provide 79.2
(0.054 g, 99.0%). MS(ES): m/z 236.27 [M+H].sup.+.
[0716] Synthesis of compound 79.3. To a suspension of 10% Pd/C
(0.030 g) in MeOH (2.0 mL) was added a solution of compound 79.2
(0.054 g, 0.229 mmol, 1.0 eq) in MeOH (2.0 mL) under nitrogen.
Reaction was purged with H.sub.2 gas for 1 hour. After completion
of the reaction, mixture was filtered through celite, washed with
MeOH. Filtrate was concentrated under reduced pressure. The residue
was triturated with 0.5% CH.sub.2Cl.sub.2 in hexane to provide pure
79.3 (0.047 g, 99.0%)
[0717] Synthesis of compound 79.4. To a mixture of 74.1 (0.075 g,
0.193 mmol, 1.0 eq) in 1,4-dioxane (3.0 ml) was added 79.3 (0.044
g, 0.212 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.08 g, 0.579 mmol, 3.0
eq). Mixture was degassed for 10 minutes using argon, then
Pd.sub.2(dba).sub.3 (0.017 g, 0.019 mmol, 0.1 eq) and Xantphos
(0.022 g, 0.038 mmol, 0.2 eq) were added. Reaction mixture was
degassed for additional 5 minutes then stirred at 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 79.4 (0.05
g, 46.5%). MS(ES): m/z 557.78 [M+H].sup.+.
[0718] Synthesis of compound I-79. To a solution of 79.4 (0.050 g,
0.089 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was added TFA (0.5
mL) The reaction was stirred at room temperature for 1.5 hours.
After completion of the reaction, mixture was poured into water,
basified with satd. NaHCO.sub.3 and extracted with EtOAc. Organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude. The crude was purified by
column chromatography to furnish I-79 (0.025 g, 61.0%). MS(ES): m/z
457.57 [M+H].sup.+; .sup.1H NMR (CDCl.sub.3, 400 MHz): .delta. 8.42
(s, 1H), 8.22-8.21 (d, 1H), 7.60-7.58 (d, 1H), 7.54-7.37 (m, 3H),
6.81 (s, 1H), 6.70-6.68 (d, 1H), 6.18 (s, 1H), 4.54 (s, 2H),
3.93-3.90 (t, 2H), 3.67-3.64 (t, 2H), 3.51 (s, 2H), 0.86 (t, 2H),
0.56 (t, 2H).
Example 80. Synthesis of
2-(4-((3,3-dimethyl-2,3-dihydrobenzofuran-6-yl)amino)-5-oxo-6,7-dihydro-5-
H-pyrrolo[3,4-b]pyridin-2-yl)-3-fluorobenzonitrile, I-80
##STR00217##
[0720] Synthesis of compound 80.1. To a solution of 74.1 (0.1 g,
0.25 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added
3,3-dimethyl-2,3-dihydrobenzofuran-6-amine (0.041 g, 0.25 mmol, 1.0
eq) and K.sub.2CO.sub.3 (0.069 g, 0.5 mmol, 2.0 eq). After
degassing with argon (10 minutes), Pd.sub.2(dba).sub.3 (0.022 g,
0.025 mmol, 0.1 eq) and Xantphos (0.029 g, 0.05 mmol, 0.2 eq) were
added. Suspension was degassed with argon for addition 5 minutes,
then stirred at 100.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into water and extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
the crude. The crude was purified by column chromatography to
furnish 80.1 (0.065 g, 49.0%). MS(ES): m/z 514.56 [M+H].sup.+.
[0721] Synthesis of compound I-80. To a solution of 80.1 (0.065 g,
0.126 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was added TFA (0.5
mL). The reaction mixture was stirred at room temperature for 1
hour. After completion of the reaction, mixture was poured into
iced water, basified with NaHCO.sub.3 and extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
provide I-80 (0.026 g, 49.7%). MS(ES): m/z 414.44 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 8.96 (s, 1H), 8.75 (s,
1H), 7.85-7.83 (m, 1H), 7.72-7.70 (m, 2H), 7.22-7.17 (m, 2H),
6.88-6.62 (m, 2H), 4.40 (s, 2H), 4.24 (s, 2H), 1.29 (s, 6H).
Example 81. Synthesis of
2-(4-((2-(2-cyano-6-fluorophenyl)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyri-
din-4-yl)amino)phenyl)-N-ethyl-2-methylpropanamide, I-81
##STR00218##
[0723] Synthesis of compound 81.1. To a mixture of 74.1 (0.1 g,
0.258 mmol, 1.0 eq) in 1,4-dioxane (2.5 mL) was added 67.3 (0.053
g, 0.258 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.089 g, 0.645 mmol,
2.5 eq). After degassing with argon for 10 minutes,
Pd.sub.2(dba).sub.3 (0.024 g, 0.0258 mmol, 0.1 eq) and Xantphos
(0.03 g, 0.052 mmol, 0.2 eq) were added. Suspension was degassed
for additional 5 minutes then stirred at 100.degree. C. for 2
hours. After completion of the reaction, mixture was poured into
water and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 81.1 (0.09
g, 62.6%). MS(ES): m/z 557.63 [M+H].sup.+.
[0724] Synthesis of compound I-81. To a solution of 81.1 (0.09 g,
0.16 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (3.0 mL) was added TFA (0.5
mL). The reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into iced water,
basified with satd. NaHCO.sub.3 and extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material. The crude was purified by column chromatography to
furnish I-81 (0.04 g, 54.2%). MS(ES): m/z 457.51 [M+H].sup.+;
.sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.04 (s, 1H), 8.77 (s,
1H), 7.85-7.83 (m, 1H), 7.72-7.68 (m, 2H), 7.39-7.31 (m, 5H), 7.18
(s, 1H), 4.40 (s, 2H), 3.07-3.01 (m, 2H), 1.43 (s, 6H), 0.96-0.92
(t, H).
Example 82. Synthesis of compound
(S)-2-(2,6-difluorophenyl)-4-((5-(1,1,1-trifluoro-2-hydroxypropan-2-yl)py-
ridin-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-82
##STR00219##
[0726] Compound I-82 was prepared by chiral separation of compound
1.78. MS (ES): m/z 450.37 [M+H].sup.+, .sup.1H NMR (MeOD, 400 MHz):
.delta. 8.81 (s, 1H), 8.56 (d, 1H), 8.01-7.98 (m, 1H), 7.58-7.53
(m, 1H), 7.19-7.11 (m, 3H), 4.51 (s, 2H), 1.76 (s, 3H).
Example 83. Synthesis of
(R)-2-(2,6-difluorophenyl)-4-((5-(1,1,1-trifluoro-2-hydroxy-propan-2-yl)p-
yridin-2-yl)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one,
I-83
##STR00220##
[0728] Compound I-83 was prepared by chiral separation of compound
1.78. MS (ES): m/z 450.37 [M+H].sup.+; .sup.1H NMR (MeOD, 400 MHz):
.delta. 8.80 (s, 1H), 8.56-8.55 (d, 1H), 8.00-7.98 (m, 1H), 7.55
(m, 1H), 7.18-7.10 (m, 3H), 4.50 (s, 2H), 1.76 (s, 3H).
Example 84. Synthesis of
2-(2,6-difluorophenyl)-4-((4-(morpholine-4-carbonyl)phenyl)-amino)-5-oxo--
6,7-dihydro-5H-pyrrolo[3,4-b]pyridine 1-oxide, I-84
##STR00221##
[0730] Synthesis of compound 84.1. Compound 53.1 (0.2 g, 0.53 mmol,
1.0 eq) and MCPBA (0.09, 0.53 mmol, 1.0 eq) were dissolved in
CH.sub.2Cl.sub.2 (5.0 mL). The reaction was stirred at 40.degree.
C. for 4 days. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 84.1 (0.15
g, 72.0%). MS(ES): m/z 396.77 [M+H].sup.+.
[0731] Synthesis of compound 84.2. To a suspension of compound 84.1
(0.15 g, 0.38 mmol, 1.0 eq) in 1,4-dioxane (3.0 ml) was added
(4-aminophenyl)(morpholino)methanone (0.078 g, 0.378 mmol, 1.0 eq)
and K.sub.2CO.sub.3 (0.156 g, 1.13 mmol, 3.0 eq). After degassing
of the suspension with argon (10 minutes) Pd.sub.2(dba).sub.3
(0.034 g, 0.037 mmol, 0.1 eq) and Xantphos (0.043 g, 0.075 mmol,
0.2 eq) were added. Suspension was degassed for 5 minutes, the
heated for 100.degree. C. for 2 hours. After completion of the
reaction, mixture was poured into water and product was extracted
with EtOAc. Organic layers were combined, washed with brine, dried
over Na.sub.2SO.sub.4 and concentrated under reduced pressure to
obtain crude material. The crude was purified by column
chromatography to provide 84.2 (0.05 g, 23.3%). MS(ES): m/z 566.56
[M+H].sup.+.
[0732] Synthesis of compound I-84. To a solution of 84.2 (0.05 g,
0.088 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (2.0 mL) was added TFA (0.5
mL). The reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 and extracted with EtOAc. Organic layers
were combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude which was purified by column
chromatography to furnish I-84 (0.020 g, 48.6%). MS(ES): m/z 466.44
[M+H].sup.+; NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.08 (s, 1H),
9.05 (s, 1H), 7.62 (m, 1H), 7.46-7.37 (m, 5H), 7.27-7.23 (t, 2H),
4.50 (s, 2H), 3.58-3.38 (m, 8H).
Example 85. Synthesis of
2-(4-((3,3-dimethyl-2,3-dihydrofuro[2,3-b]pyridin-6-yl)amino)-5-oxo-6,7-d-
ihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)-3-fluorobenzonitrile,
I-85
##STR00222## ##STR00223##
[0734] Synthesis of compound 85.2. To a solution of LDA (2.1 g,
21.0 mmol, 1.05 eq) in THF (15.0 mL) was added n-BuLi (8.6 mL, 21.0
mmol, 1.05 eq) at -20.degree. C. The reaction was stirred at same
temperature for 1 hour. Compound 85.1 (2.0 g, 20.0 mmol, 1.0 eq)
was added at -78.degree. C. and the reaction was stirred for 3
hours. Then a solution of I.sub.2 (5.3 g, 21.0 mmol, 1.05 eq) in
THF (15.0 mL) was added dropwise to the reaction mixture and the
reaction was stirred for 1 hour. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
pure 85.2 (1.7 g, 37.0%). MS(ES): m/z 222.99 [M+H].sup.+.
[0735] Synthesis of compound 85.3. 2-methylprop-2-en-1-ol (0.32 g,
4.5 mmol, 1.0 eq) was added to a solution of NaH (0.2 g, 9.0 mmol,
2.0 eq) in THF (10.0 mL). Compound 85.2 (1.0 g, 4.5 mmol, 1.0 eq)
was added to the mixture. Reaction was stirred at room temperature
for 2 hours. After completion of the reaction, water was added to
the reaction mixture and product was extracted with EtOAc. Organic
layers were combined, washed with brine, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
pure 85.3 (0.3 g, 24.3%). MS(ES): m/z 275.09 [M+H].sup.+.
[0736] Synthesis of compound 85.4. Compound 85.3 (1.0 g, 3.6 mmol,
1.0 eq), TBAC (1.0 g, 3.6 mmol, 1.0 eq), sodium formate (0.24 g,
3.6 mmol, 1.0 eq) and K.sub.2CO.sub.3 (1.5 g, 10.9 mmol, 3.0 eq)
were mixed in DMF (10.0 mL) and suspension was degassed with argon
gas for 15 minutes. Pd(OAC).sub.2 (0.08 g, 0.36 mmol, 0.1 eq) was
added to the mixture and the reaction was stirred 100.degree. C.
for 2 hours. After completion of the reaction, water was added and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude material. The crude was
purified by column chromatography to furnish 85.4 (0.3 g, 55.3%).
MS(ES): m/z 149.19 [M+H].sup.+.
[0737] Synthesis of compound 85.5. To a solution of 85.4 (0.23 g,
1.54 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (5.0 mL) was added m-CPBA
(0.39 g, 2.31 mmol, 1.5 eq) 0.degree. C. The reaction was stirred
at room temperature for 2 hours. After completion of the reaction,
mixture was poured in water and product was extracted with
CH.sub.2Cl.sub.2. Organic layers were combined, washed with brine
solution, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude material. The crude was purified
by column chromatography to provide 85.5 (0.1 g, 39.3%). MS(ES):
m/z 165.19 [M+H].sup.+.
[0738] Synthesis of compound 85.6. Compound 85.5 (0.3 g, 1.81 mmol,
1.0 eq) was dissolved in POCl.sub.3 (5.0 mL) and the reaction was
stirred at 100.degree. C. for 6 hours. After completion of the
reaction, mixture was quenched with satd. NaHCO.sub.3 then
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude material. The crude was purified by column
chromatography to furnish 85.6 (0.1 g, 30.0%). MS(ES): m/z 183.64
[M+H].sup.+.
[0739] Synthesis of compound 85.7. To a solution of compound 85.6
(0.06 g, 0.327 mmol, 1.0 eq) in 1,4-dioxane (1 ml) was added
2,4-dimethoxy benzyl amine (0.082 g, 0.149 mmol, 1.5 eq) and
Cs.sub.2CO.sub.3 (0.319 g, 0.98 mmol, 3.0 eq). The reaction mixture
was degassed for 10 minutes with argon, then Pd.sub.2(dba).sub.3
(0.03 g, 0.032 mmol, 0.1 eq) and
2-Dicyclohexylphosphino-2'-(N,N-dimethylamino)biphenyl (0.025 g,
0.065 mmol, 0.2 eq) were added. The reaction was then stirred at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was poured into water and product was extracted with EtOAc.
Organic layers were combined, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 85.7 (0.04
g, 43.4%). MS (ES): m/z 282.39 [M+H].sup.+.
[0740] Synthesis of compound 85.8. Compound 85.7 (0.03 g, 0.106
mmol, 1.0 eq) was dissolved in TFA (1.0 mL). The reaction was
stirred at 60.degree. C. for 2 hours. After completion of the
reaction, mixture was quenched with satd. NaHCO.sub.3 solution and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain pure 85.8 (0.020 g, 99.0%).
MS(ES): m/z 164.21 [M+H].sup.+.
[0741] Synthesis of compound 85.9. To a mixture of 74.1 (0.047 g,
0.12 mmol, 1.0 eq) in 1,4-dioxane (3.0 ml) was added compound 85.8
(0.020 g, 0.12 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.05 g, 0.36
mmol, 3.0 eq). The reaction mixture was degassed for 10 minutes
with argon then Pd.sub.2(dba).sub.3 (0.011 g, 0.012 mmol, 0.1 eq)
and xantphos (0.013 g, 0.024 mmol, 0.2 eq) were added and again
degassed for 5 minutes. The reaction was stirred at 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 85.9 (0.04
g, 64.0%). MS(ES): m/z 515.55 [M+H].sup.+.
[0742] Synthesis of compound I-85. To a solution of 85.9 (0.04 g,
0.077 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (1.0 mL) was added TFA (1.0
mL) The reaction was stirred at room temperature for 1 hour. After
completion of the reaction, mixture was poured into water, basified
with satd. NaHCO.sub.3 and product was extracted with EtOAc.
Organic layer were combined and dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to provide I-85 (0.02
g, 62.1%). MS(ES): m/z 415.43 [M+H].sup.+; .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.40 (s, 1H), 9.01 (s, 1H),
7.93-7.87 (m, 2H), 7.77-7.72 (m, 2H), 7.58 (s, 1H), 7.18-7.16 (d,
1H), 4.49 (s, 2H), 4.25 (s, 2H), 1.49 (s, 6H).
Example 86. Synthesis of
2-(2,6-difluorophenyl)-4-((2,2-dioxido-1,3-dihydro-benzo[c]thio-phen-5-yl-
)amino)-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-5-one, I-86
##STR00224##
[0744] Synthesis of compound 86.2. To a solution of 86.1 (1.6 g,
6.06 mmol, 1.0 eq) in benzene (8.0 mL) was added solution of sodium
sulfide monohydrate (2.9 g, 12.1 mmol, 2.0 eq) in water (30 mL)
followed by Benz triethyl ammonium chloride (catalytic). The
reaction was stirred at 20.degree. C. for 30 hours. After
completion of the reaction, mixture was poured into water and
extracted with CH.sub.2Cl.sub.2. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain 86.2 (0.7 g, 84.7%). Crude product
was used for next step without any further purification.
[0745] Synthesis of compound 86.3. To 86.2 (0.7 g, 5.14 mmol, 1.0
eq) was added AcOH (4.3 mL) at 5-10.degree. C. Solution was stirred
for 1 hour. To this solution was added 30% H.sub.2O.sub.2 solution
(1.2 mL). Reaction mixture stirred at 90-95.degree. C. for 3 hours.
After completion of the reaction, mixture was pored into water and
product was extracted with EtOAc. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to get crude material. The crude was
purified by column chromatography to provide 86.3 (0.3 g, 34.7%).
.sup.1H NMR (CDCl.sub.3, 400 MHz): .delta. 7.40-7.28 (m, 4H), 4.4
(s, 4H).
[0746] Synthesis of compound 86.4. To a solution of 86.3 (0.2 g,
1.19 mmol, 1.0 eq) in concentrated H.sub.2SO.sub.4 (2.0 mL) at
0.degree. C. was added HNO.sub.3 (1.0 mL) slowly. Reaction was
stirred at 0.degree. C. for 30 minutes. After completion of the
reaction, mixture was transferred into crushed ice and product was
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to get crude material. The crude was purified by column
chromatography to furnish 86.4 (0.12 g, 47.3%). .sup.1H NMR
(CDCl.sub.3, 400 MHz): .delta.8.3-8.26 (m, 2H), 7.58-7.54 (d, 1H),
4.51-4.48 (d, 4H).
[0747] Synthesis of compound 86.5. To the suspension of 10% Pd/C
(0.03 g) in MeOH (3.0 mL) was added compound 86.4 (0.12 g, 0.56
mmol, 1.0 eq). Suspension was purged with H.sub.2 gas for 1 hour.
Reaction mixture filtered through celite and concentrated under
reduced pressure to obtain 86.5 (0.08 g, 77.5%). MS(ES): m/z 184.1
[M+H].sup.+.
[0748] Synthesis of compound 86.6. To a mixture of 74.1 (0.080 g,
0.21 mmol, 1.0 eq) in 1,4-dioxane (3.0 ml) was added 86.5 (0.046 g,
0.21 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.073 g, 0.53 mmol, 2.5
eq). The reaction mixture was degassed for 10 minutes using argon
then Pd.sub.2(dba).sub.3 (0.019 g, 0.021 mmol, 0.1 eq) and Xantphos
(0.024 g, 0.042 mmol, 0.2 eq) were added, and again degassed for 5
minutes. The reaction was stirred at 120.degree. C. for 2 hours.
After completion of the reaction, mixture was transferred into
water and product was extracted with EtOAc. Organic layers were
combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude material. The
crude was purified by column chromatography to furnish 86.6 (0.08
g, 72.2%). MS(ES): m/z 528.6 [M+H].sup.+.
[0749] Synthesis of compound I-86. Compound 86.6 (0.08 g, 0.151
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (1.0 mL) and TFA
(0.5 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 and product was extracted with EtOAc. Organic layers
were combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude material. The crude was purified
by column chromatography to provide (0.05 g, 77.1%). MS(ES): m/z
428.57 [M+H].sup.+; NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.10 (s,
1H), 8.75 (s, 1H), 7.55-7.51 (m, 1H), 7.43-7.34 (m, 2H), 7.22-7.18
(m, 2H), 7.08 (s, 1H), 5.76 (s, 1H), 4.57-4.46 (d, 4H), 4.37 (s,
2H).
Example 87. Synthesis of
3-fluoro-2-(4-((5-(4-hydroxy-9-azadispiro[2.1.25.33]decan-9-yl)pyridin-2--
yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitrile,
I-87
##STR00225## ##STR00226##
[0751] Synthesis of compound 87.2. Methyl Iodide (46.2 g, 45.2
mmol, 1.0 eq) was added to 87.1 (5.0 g, 325 mmol, 1.1 eq). Reaction
mixture was stirred at room temperature for 48 hours. After
completion of the reaction, solid were filtered off and washed with
Et.sub.2O to get pure 87.2 (5.2 g, 91.6%). .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 4.15-4.12 (t, 2H), 3.80-3.77 (t,
2H), 2.97 (s, 6H).
[0752] Synthesis of compound 87.4. KOBu.sup.t (0.675 g, 6.03 mmol,
1.0 eq) was added to t-Butanol (10 mL) and heated to 60.degree. C.
To this solution was added 87.3 (1.2 g, 6.03 mmol, 1.0 eq) and
stirred at room temperature for 1 h. To the mixture was added 87.2
(1.36 g, 5.4 mmol, 0.9 eq) portion wise and resulting mixture was
stirred at room temperature for 2 hours. To this mixture was added
solution of KOBu.sup.t (0.68 g, 6.03 mmol, 1.0 eq) in t-Butanol (10
mL) and reaction was stirred at room temperature for 48 hours.
After completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude material. The crude was purified by column
chromatography to provide 87.4 (0.2 g, 13.2%). .sup.1H NMR
(CDCl.sub.3, 400 MHz): .delta. 3.76 (s, 4H), 1.49 (s, 9H), 1.3-1.26
(m, 4H), 0.87 (bs, 4H).
[0753] Synthesis of compound 87.5. To a solution of 87.5 (0.2 g,
0.79 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (5.0 mL) was added TFA (0.9
g, 7.96 mmol, 10 eq) at 0.degree. C. Reaction was stirred for 2
hours. After completion of the reaction, solvent was concentrated
under reduced pressure and neutralised with satd. NaHCO.sub.3
solution. Mixture was extracted with CH.sub.2Cl.sub.2, organic
layers were combined, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain 87.5 (0.11 g, 91.4%). .sup.1H NMR
(CDCl.sub.3, 400 MHz): .delta. 3.12 (s, 4H), 1.34-1.31 (m, 4H),
0.75-0.73 (m, 4H).
[0754] Synthesis of compound 87.6. To a solution of 87.5 (0.11 g,
0.728 mmol, 1.0 eq) in DMSO (5.0 mL) was added
5-fluoro-2-nitropyridine (0.103 g, 0.728 mmol, 1.0 eq) followed by
DIPEA (0.94 g, 7.28 mmol, 10 eq). Reaction mixture was stirred at
100.degree. C. for 2 hours. After completion of the reaction,
mixture was transferred into water and extracted with EtOAc.
Organic layers were combined, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain 87.6 (0.1 g, 50.3%).
MS(ES): m/z 274.3 [M+H].sup.+.
[0755] Synthesis of compound 87.7. To a solution of 87.6 (0.1 g,
0.366 mmol, 1.0 eq) in MeOH (3.0 mL) was added NaBH.sub.4 (0.070 g,
1.83 mmol, 5.0 eq) at 0.degree. C. Reaction mixture was stirred at
room temperature for 1 hour. After completion, the reaction was
quenched with saturated NH.sub.4Cl solution and extracted with
CH.sub.2Cl.sub.2. Organic layers were combined, dried over
Na.sub.2SO.sub.4 and concentrated under reduced pressure to obtain
crude material which was triturated with n-hexane to provide 87.7
(0.075 g, 79.0%). MS(ES): m/z 276.38 [M+H].sup.+.
[0756] Synthesis of compound 87.8. To the suspension of 10% Pd/C
(0.05 g) in MeOH (3.0 mL) was added compound 87.7 (0.075 g, 0.272
mmol, 1.0 eq) and purged with H.sub.2 gas for 2 hours. Reaction
mixture was filtered through celite and concentrated under reduced
pressure to obtain 87.8 (0.06 g, 89.8%). MS(ES): m/z 246.37
[M+H].sup.+.
[0757] Synthesis of compound 87.9. To a solution 74.1 (0.090 g,
0.232 mmol, 1.0 eq) in 1,4-dioxane (2.0 ml) was added 87.8 (0.051
g, 0.208 mmol, 1.0 eq) and K.sub.2CO.sub.3 (0.080 g, 0.58 mmol, 2.5
eq). The reaction mixture was degassed for 10 minutes using argon
then Pd.sub.2(dba).sub.3 (0.021 g, 0.023 mmol, 0.1 eq) and Xantphos
(0.026 g, 0.046 mmol, 0.2 eq) were added and again degassed for 5
minutes. The reaction was stirred at 110.degree. C. for 2 hours.
After completion of the reaction, mixture was poured into water and
product was extracted with EtOAc. Organic layers were combined,
dried over Na.sub.2SO.sub.4 and concentrated under reduced pressure
to obtain crude material. The crude was purified by column
chromatography to furnish 87.9 (0.07 g, 55.5%). MS(ES): m/z 597.6
[M+H].sup.+.
[0758] Synthesis of compound I-87. Compound 87.9 (0.070 g, 0.117
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (2.0 mL) and TFA
(0.5 mL) was added to the reaction mixture. The reaction was
stirred at room temperature for 1 hour. After completion of the
reaction, mixture was poured into water, basified with satd.
NaHCO.sub.3 solution and extracted with EtOAc. Organic layers were
combined, dried over Na.sub.2SO.sub.4 and concentrated under
reduced pressure to obtain crude. The crude was purified by column
chromatography to furnish I-87 (0.030 g, 51.3%). MS (ES): m/z 497.7
[M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta. 9.52 (s,
1H), 8.86 (s, 1H), 8.47 (s, 1H), 7.96 (d, 1H), 7.89-7.86 (dd, 1H),
7.8-7.72 (m, 2H), 7.41-7.38 (dd, 1H), 7.09-7.07 (d, 1H), 4.63 (d,
1H), 4.42 (s, 2H), 3.23-3.20 (d, 2H), 2.79-2.76 (d, 2H), 0.46 (s,
6H), 0.34-0.32 (d, 2H).
Example 88. Synthesis of
3-fluoro-2-(4-((5-((3R,5R)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le. I-88
##STR00227## ##STR00228##
[0760] Synthesis of compound 88.2. To a stirred mixture of 88.1
(4.0 g, 21.5 mmol, 1.0 eq) and 3-bromoprop-1-ene (4.7 mL, 53.9
mmol, 2.5 eq) in THF (10.0 mL) was added saturated NH.sub.4Cl
solution (20.0 mL). To the suspension was slowly added zinc dust
(2.8 g, 43.1 mmol, 2.0 eq) while maintaining temperature below
40.degree. C. The reaction mixture was stirred at room temperature
for 12 hours. After completion of the reaction, 10% aq.
H.sub.2SO.sub.4 was slowly added. Reaction mixture was filtered and
the product was extracted with EtOAc. Organic layers were
separated, washed with brine solution and dried over
Na.sub.2SO.sub.4, concentrated under reduced pressure to provide
88.2 (4.3 g 87.6%). .sup.1H NMR (DMSO-d.sub.6, 400 MHz): .delta.
5.91-5.83 (m, 1H), 5.24-5.19 (m, 2H), 3.55-3.48 (m, H), 3.41-3.25
(m, 2H), 2.42-2.40 (d, 2H), 1.89-1.85 (t, 2H), 1.47 (s, 9H).
[0761] Synthesis of compound 88.3. To a stirred mixture of 88.2
(4.3 g, 18.9 mmol, 1.0 eq) and NaIO.sub.4 (4.0 g, 18.9 mmol, 1.0
eq) in t-Butanol (28 mL) and water (9.4 mL) was added solution of
sodium metabisulphite (3.59 g, 18.9 mmol, 1.0 eq) in water (15.0
mL) at 50.degree. C. Reaction mixture was stirred at 50.degree. C.
for 12 hour followed by 10 hours at room temperature. After
completion of the reaction, reaction mixture cooled to room
temperature and extracted with EtOAc. Organic layers were combined,
washed with brine, dried over sodium sulphate and concentrated
under reduced pressure to obtain crude material which was purified
by column chromatography, to provide 88.3 (1.0 g, 21.7%). MS(ES):
m/z 244.3 [M+H].sup.+.
[0762] Synthesis of compound 88.4. To a stirred solution of 88.3
(0.38 g, 1.56 mmol, 1.0 eq) in CH.sub.2Cl.sub.2 (5.0 mL) was added
TFA (1.0 mL) and reaction mixture was stirred at room temperature
for 2 hours. Reaction mixture was concentrated under reduced
pressure to obtain crude 88.4 (0.3 g, 80.0%), MS(ES): m/z 144.17
[M+H].sup.+.
[0763] Synthesis of compound 88.5. To a stirred mixture of 88.4
(0.12 g, 0.84 mmol, 1.2 eq) and 5-fluoro-2-nitropyridine (0.1 g,
0.70 mmol, 1.0 eq) in DMSO (2.0 mL) was added DIPEA (0.92 g, 7.03
mmol, 10.0 eq) and heated at 90.degree. C. for 5 hours. Reaction
mixture was cooled to room temperature, poured into water and
extracted with EtOAc. Organic layers were combined, washed with
brine, dried over Na.sub.2SO.sub.4 and concentrated under reduced
pressure to obtain crude which was purified by column
chromatography to furnish 88.5 (0.125 g, 64.3%). MS(ES): m/z 266.33
[M+H].sup.+.
[0764] Synthesis of compound 88.6. To a suspension of 10% Pd/C
(0.05 g) in MeOH (5.0 mL) was added compound 88.5 (0.125 g, 0.471
mmol, 1.0 eq). Suspension was purged with H.sub.2 gas for 1 hour.
Reaction mixture filtered through celite and concentrated under
reduced pressure to obtain 88.6 (0.10 g, 94.0%). MS(ES): m/z 236.37
[M+H].sup.+.
[0765] Synthesis of compound 88.7. To a mixture of 74.1 (0.075 g,
0.193 mmol, 1.0 eq) in 1,4-dioxane (2.0 mL) was added 88.5 (0.049
g, 0.212 mmol, 1.1 eq) and K.sub.2CO.sub.3 (0.079 g, 0.579 mmol,
3.0 eq). The reaction mixture was degassed for 10 minutes using
argon then Pd.sub.2(dba).sub.3 (0.017 g, 0.019 mmol, 0.1 eq) and
Xantphos (0.022 g, 0.038 mmol, 0.2 eq) were added and again
degassed for 5 minutes. The reaction was stirred at 100.degree. C.
for 2 hours. After completion of the reaction, mixture was poured
into water and product was extracted with EtOAc. Organic layers
were combined, washed with brine, dried over Na.sub.2SO.sub.4 and
concentrated under reduced pressure to obtain crude. This was
purified by column chromatography to furnish 88.7 (0.058 g, 23.3%).
MS(ES): m/z 587.58 [M+H].sup.+.
[0766] Synthesis of compound 88.8. Diastereomeric mixture 88.7
(0.058 g) was separated using reverse phase column (X-BRIDGE C18
250.times.19 mm, 5.mu.) to afford to afford pure 88.8 (0.023 g), MS
(ES): 587.3 [M+H].sup.+
[0767] Synthesis of compound I-88. Compound 88.8 (0.023 g, 0.039
mmol, 1.0 eq) was dissolved in CH.sub.2Cl.sub.2 (2.0 mL) and TFA
(0.2 mL) was added. The reaction mixture was stirred at room
temperature for 2 hours. After completion of the reaction, mixture
was poured into water, basified with satd. NaHCO.sub.3 and
extracted with CH.sub.2Cl.sub.2. Organic layers were combined,
washed with brine, dried over Na.sub.2SO.sub.4 and concentrated
under reduced pressure to obtain crude which was purified
trituration with n-pentane to get pure I-88 (0.010 g, 52.4%).
MS(ES): m/z 487.2 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400 MHz):
.delta. 9.42 (s, 1H), 8.81 (s, 1H), 8.31 (s, 1H), 7.88-7.85 (m,
1H), 7.79-7.69 (m, H), 7.65-7.64 (d, 1H), 7.11-7.09 (d, 1H),
7.01-6.98 (dd, 1H), 4.96 (d, 1H), 4.40 (s, 2H), 4.35 (s, 1H),
3.83-3.79 (m, 1H), 3.60-3.57 (dd, 1H), 3.29 (s, 1H), 3.25 (s, H),
2.20-2.13 (m, 2H), 2.08-2.00 (m, 1H), 1.88-1.84 (dd, 1H).
Example 89. Synthesis of
3-fluoro-2-(4-((5-((3S,5R)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le, I-89
##STR00229##
[0769] Compound I-89 was prepared from 88.7 using procedure
described in Example 89. MS(ES): m/z 487.2 [M+H].sup.+; .sup.1H NMR
(DMSO-d.sub.6, 400 MHz): .delta. 9.43 (s, 1H), 8.81 (s, 1H), 8.31
(s, 1H), 7.87-7.85 (m, 1H), 7.78-7.70 (m, 2H), 7.64 (d, 1H),
7.11-7.09 (d, 1H), 7.01-6.98 (dd, 1H), 4.97 (d, 1H), 4.40 (s, 2H),
4.35 (s, 1H), 3.86-3.82 (m, 1H), 3.59-3.56 (dd, 1H), 3.38 (s, 1H),
3.26 (s, 2H), 2.12-2.08 (m, 1H), 2.01-1.98 (m, 2H), 1.94-1.90 (dd,
1H).
Example 90. Synthesis of
3-fluoro-2-(4-((5-((3R,5R)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le, I-90
##STR00230##
[0771] Compound I-90 was prepared by chiral separation of compound
I-88. MS(ES): m/z 487.2 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400
MHz): .delta. 9.43 (s, 1H), 8.82 (s, 1H), 8.32 (s, 1H), 7.88-7.86
(dd, 1H), 7.79-7.71 (m, H), 7.65 (d, 1H), 7.12-7.09 (d, 1H),
7.02-6.99 (dd, 1H), 4.96 (d, 1H), 4.41 (s, 2H), 4.35 (s, 1H),
3.83-3.79 (m, 1H), 3.60-3.58 (dd, 1H), 3.29 (s, 1H), 3.25 (s, 2H),
2.18-2.12 (m, 2H), 2.09-2.03 (m, 1H), 1.89-1.85 (dd, 1H).
Example 91. Synthesis of
3-fluoro-2-(4-((5-((3S,5S)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le, I-91
##STR00231##
[0773] Compound I-91 was prepared by chiral separation of compound
I-88. MS(ES): m/z 487.2 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400
MHz): 9.42 (s, 1H), 8.82 (s, 1H), 8.32 (s, 1H), 7.88-7.86 (dd, 1H),
7.79-7.71 (m, 2H), 7.65 (d, 1H), 7.11-7.09 (d, 1H), 7.01-6.98 (dd,
1H), 4.98 (s, 1H), 4.41 (s, 2H), 4.35 (s, 1H), 3.83-3.80 (m, 1H),
3.61-3.58 (dd, 1H), 3.29 (s, 1H), 3.25 (s, 2H), 2.18-2.12 (m, 2H),
2.09-2.03 (m, 1H), 1.89-1.85 (dd, 1H).
Example 92. Synthesis of
3-fluoro-2-(4-((5-((3R,5S)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le, I-92
##STR00232##
[0775] Compound I-92 was prepared by chiral separation of compound
I-89. MS(ES): m/z 487.1 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400
MHz): .delta. 9.43 (s, 1H), 8.81 (s, 1H), 8.32 (s, 1H), 7.88-7.86
(dd, 1H), 7.77-7.71 (m, 2H), 7.65-7.64 (d, 1H), 7.11-7.09 (d, 1H),
7.01-6.98 (dd, 1H), 4.98-4.97 (d, 1H), 4.41 (s, 2H), 4.35 (s, 1H),
3.86-3.82 (m, 1H), 3.59-3.56 (dd, 1H), 3.30 (s, 2H), 3.25 (s, 2H),
2.13-2.08 (m, 1H), 2.02-1.99 (m, 2H), 1.94-1.90 (dd, 1H).
Example 93. Synthesis of
3-fluoro-2-(4-((5-((3S,5R)-3-hydroxy-1-oxa-7-azaspiro[4.4]nonan-7-yl)pyri-
din-2-yl)amino)-5-oxo-6,7-dihydro-5H-pyrrolo[3,4-b]pyridin-2-yl)benzonitri-
le, I-93
##STR00233##
[0777] Compound I-93 was prepared by chiral separation of compound
I-89. MS(ES): m/z 487.2 [M+H].sup.+; .sup.1H NMR (DMSO-d.sub.6, 400
MHz): .delta. 9.43 (s, 1H), 8.81 (s, 1H), 8.32 (s, 1H), 7.87-7.85
(d, 1H), 7.77-7.71 (m, 2H), 7.65-7.64 (d, 1H), 7.11-7.09 (d, 1H),
7.01-6.98 (dd, 1H), 4.97 (s, 1H), 4.41 (s, 2H), 4.36 (s, 1H),
3.86-3.83 (m, 1H), 3.59-3.57 (dd, 1H), 3.29 (s, 1H), 3.26 (s, 2H),
2.13-2.08 (m, 1H), 2.02-2.00 (m, 2H), 1.94-1.91 (dd, 1H).
Example 94: Tyk2 & JAK2 Radioactive Kinase Assay
[0778] Peptide substrate, [KKSRGDYMTMQIG], (20 .mu.M) is prepared
in reaction buffer (20 mM Hepes pH 7.5, 10 mM MgCl.sub.2, 1 mM
EGTA, 0.02% Brij35, 0.02 mg/mL BSA, 0.1 mM Na.sub.3PO.sub.4, 2 mM
DTT, 1% DMSO. TYK2 (Invitrogen) kinase is added, followed by
compounds in DMSO. 33PATP is added to initiate the reaction in ATP
at 10 .mu.M. Kinase reaction is incubated for 120 min at room temp
and reactions are spotted onto P81 ion exchange paper (Whatman
#3698-915), and then washed extensively in 0.75% phosphoric acid,
prior to reading the radioactivity counts. For JAK2 (Invitrogen)
kinase assay the peptide substrate poly[Glu:Tyr](4:1), 0.2 mg/ml is
used, in the reaction carried out the same as for TYK2.
Example 95: Tyk2 & JAK2 Caliper Assay
[0779] The caliper machine employs an off chip mobility shift assay
to detect phosphorylated peptide substrates from kinase assays,
using microfluidics technology. The assays are carried out at ATP
concentration equivalent to the ATP Km, and at 1 mM ATP. Compounds
are serially diluted in DMSO then further diluted in assay buffer
(25 mM HEPES, pH 7.5, 0.01% Brij-35, 0.01% Triton, 0.5 mM EGTA). 5
ul of diluted compound was added into wells first, then 10 ul of
enzyme mix was added into wells, followed by 10 uL of substrate mix
(peptide and ATP in 10 mM MgCl.sub.2) to start reaction. Reaction
was incubated at 28.degree. C. for 25 min and then added 25 ul stop
buffer (100 mM HEPES, 0.015% Brij-35, 50 mM EDTA), followed by
reading with Caliper. JAK2 at 1 nM final concentration and TYK2 at
9.75 nM are from Cama, and substrates used are ATP at 20 and 16 uM,
respectively. JAK2 assay uses peptide 22 and TYK2 uses peptide 30
(Caliper), each at 3 uM.
[0780] Table 2 shows the activity of selected compounds of this
invention in the Tyk2 and JAK2 activity inhibition assay. The
compound numbers correspond to the compound numbers in Table 1.
Compounds having an activity designated as "A" provided an
Ki.ltoreq.0.01 .mu.M; compounds having an activity designated as
"B" provided an Ki of 0.01-0.1 .mu.M; compounds having an activity
designated as "C" provided an Ki of 0.1-1.0 .mu.M; and compounds
having an activity designated as "D" provided an Ki.gtoreq.1.0
.mu.M.
TABLE-US-00002 TABLE 2 Tyk2 & JAK2 Activity Inhibition Data
Compound # Tyk2 Ki JAK2 Ki I-1 A C I-2 A B I-3 A C I-4 A B I-5 A C
I-6 A C I-7 A C I-8 A C I-9 B B I-10 A B I-12 A C I-13 B C I-14 A C
I-15 A B I-16 A C I-17 A B I-18 A B I-19 B D I-20 A B I-21 A B I-22
A B I-23 A C I-24 A A I-25 A B I-26 A C I-27 A B I-28 A C I-29 A C
I-30 A C I-31 A B I-32 A D I-33 A C I-34 A B I-35 A C I-36 A B I-37
A A I-38 A A I-39 A C I-40 C D I-41 C C I-42 A B I-43 A B I-44 A C
I-45 A C I-46 B C I-47 A A I-48 B C I-48 A B I-50 A B I-51 A A I-52
A A I-53 A B I-54 A B I-55 A A I-56 B C I-57 A B I-58 A A I-59 A B
I-60 A B I-61 B D I-62 A B I-63 A B I-64 A B I-65 A A I-66 A B I-67
A A I-68 B C I-69 B D I-70 A C I-71 B C I-72 B D I-73 B D I-74 A C
I-75 A A I-76 A B I-77 A B I-78 A B I-79 A B I-80 A B I-81 A A I-82
A A I-83 A A I-84 B D I-85 D D I-86 A B I-87 A A I-88 A A I-89 A A
I-90 A A I-91 A A I-92 A B I-93 A B
[0781] IL-12 Induced pSTAT4 in human PBMC. Human PBMC are isolated
from buffy coat and are stored frozen for assays as needed. Cells
for assay are thawed and resuspended in complete media containing
serum, then cells are diluted to 1.67 E6 cells/ml so that 120 .mu.l
per well is 200,000 cells. 15 .mu.l of compound or DMSO is added to
the well at the desired concentrations and incubated at 1 hr at 37
C. 15 .mu.l of stimulus (final concentration of 1.7 ng/mL IL-12) is
added for 30 minutes prior to pSTAT4 and total STAT4 analysis using
cell lysates prepared and analyzed by MSD reagents as per
manufacturer protocol. The final DMSO concentration of compound in
the assay is 0.1%.
[0782] GM-CSF Induced pSTAT5 in human PBMC. Cells are prepared for
analysis as in the above procedure and 15 .mu.l of GM-CSF (final
concentration 5 ng/mL) is added for 20 minutes prior to pSTAT5 and
total STAT5 analysis using cell lysates prepared and analyzed by
MSD reagents as per manufacturer protocol. The final DMSO
concentration of compound in the assay is 0.1%.
[0783] Table 3 shows the activity of selected compounds of this
invention in the IL-12 induced pSTAT4 and GM-CSF induced pSTAT5
inhibition assays in human PBMC. The compound numbers correspond to
the compound numbers in Table 1. Compounds having an activity
designated as "A" provided an EC.sub.50.ltoreq.2 .mu.M; compounds
having an activity designated as "B" provided a EC.sub.50 of 2-20
.mu.M; and compounds having an activity designated as "C" provided
an EC.sub.50>20 .mu.M.
TABLE-US-00003 TABLE 3 Cell activity data Compound # Tyk2-pSTAT4
EC.sub.50 JAK2-pSTAT5 EC.sub.50 I-1 A B I-2 A B I-4 A A I-10 A A
I-15 A B I-17 A B I-18 A B I-20 A C I-25 A B I-34 A B I-36 A B I-52
A A I-58 A B I-59 A B I-60 A B I-62 A A I-65 A B I-67 A B I-70 A C
I-72 C C I-75 A B I-79 A B I-84 C C I-88 A A I-89 A A I-91 A A I-93
A B
[0784] Acute Mouse Model for IL-12/IL-18 Induced IFN.gamma. in
serum--C57BL/6 mice mice are dosed PO or SC with test compound at
various doses or vehicle (n=9 or 10 per group) and then, 30 minutes
later, injected IP with 10 ng IL-12 and 1 .mu.g IL-18. Three hours
after IL-12/IL-18 injection, mice are bled and serum isolated.
Concentration of cytokines in serum are determined using CBA
analysis.
[0785] Certain compounds of the invention inhibit .about.50% of the
IL-12/IL-18 induced IFN.gamma. production in vivo.
[0786] Ex vivo Mouse IL-12 induced IFN.gamma. Studies C57/BL6 mice
are given a single oral dose of either vehicle or different doses
of compound at a volume of 10 mL/kg. 30 minutes to 1 hour after
dosing, animals are euthanized and blood was collected via vena
cava into sodium heparin blood collection tubes and inverted
several times. Blood is then plated on anti-CD3 coated plates and
stimulated with 2 ng/ml of mouse IL-12 in RPMI media for 24 hours
at 37.degree. C. in humidified incubator with 5% CO.sub.2. At the
end of the incubation, blood is centrifuged at 260 g for 5 minutes
to collect supernatant. IFN.gamma. concentration in the supernatant
is determined with mouse IFN.gamma. MSD kit per manufacture's
instruction (Meso Scale Discovery). At the time of the blood
collection, plasma is collected for drug level analysis by
LC-MS/MS.
[0787] Certain compounds of the invention inhibit IL-12 induced
IFN.gamma. production in the ex-vivo mouse model.
[0788] T-ALL Cell Proliferation Assay T-ALL cell lines KOPT-K1,
HPB-ALL, DND-41, PEER, and CCRF-CEM are cultured in RPMI-1640
medium with 10% fetal bovine serum and penicillin/streptomycin.
Cells are plated in triplicate at 1.times.10.sup.4 cells per well
in 96-well plates. T-ALL cell lines DU. 528, LOUCY, and SUP-T13 are
cultured in the same medium and plated at a density of
1.5.times.10.sup.4 cells per well. The cells are treated with DMSO
or different concentrations of each compound of the invention. Cell
viability at 72 hour exposure to the drug is assessed by
CellTiter-Glo Luminescent Cell Viability Assay (Promega).
CellTiter-Glo Reagent is added into the well and incubated for 10
minutes. Luminescence is measured subsequently using a 96-well
plate luminescence reader. Cell viability is calculated by using
the DMSO treated samples as 100%. IC.sub.50 value is calculated by
nonlinear regression using GraphPad Prism software.
[0789] While we have described a number of embodiments of this
invention, it is apparent that our basic examples may be altered to
provide other embodiments that utilize the compounds and methods of
this invention. Therefore, it will be appreciated that the scope of
this invention is to be defined by the appended claims rather than
by the specific embodiments that have been represented by way of
example.
* * * * *