U.S. patent application number 16/552248 was filed with the patent office on 2020-05-14 for therapeutic rna.
This patent application is currently assigned to Sanofi. The applicant listed for this patent is Sanofi. Invention is credited to Friederike Gieseke, Ugur Sahin, Timothy R. Wagenaar, Dmitri G. Wiederschain.
Application Number | 20200147176 16/552248 |
Document ID | / |
Family ID | 61569463 |
Filed Date | 2020-05-14 |
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United States Patent
Application |
20200147176 |
Kind Code |
A1 |
Gieseke; Friederike ; et
al. |
May 14, 2020 |
Therapeutic RNA
Abstract
This disclosure relates to the field of therapeutic RNAs for
treatment of solid tumor cancers.
Inventors: |
Gieseke; Friederike; (Mainz,
DE) ; Sahin; Ugur; (Mainz, DE) ; Wagenaar;
Timothy R.; (Sudbury, MA) ; Wiederschain; Dmitri
G.; (Bridgewater, NJ) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
Sanofi |
Paris |
|
FR |
|
|
Assignee: |
Sanofi
Paris
FR
|
Family ID: |
61569463 |
Appl. No.: |
16/552248 |
Filed: |
August 27, 2019 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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PCT/US2018/019878 |
Feb 27, 2018 |
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16552248 |
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62597527 |
Dec 12, 2017 |
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62464981 |
Feb 28, 2017 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
A61K 38/21 20130101;
C07K 14/5443 20130101; A61K 38/20 20130101; C07K 14/535 20130101;
A61K 48/00 20130101; A61P 35/00 20180101; A61K 39/3955 20130101;
A61K 38/2086 20130101; A61K 38/193 20130101; C07K 14/5434 20130101;
A61K 38/212 20130101; A61K 38/208 20130101; A61K 9/0019 20130101;
C12N 2310/335 20130101; C07K 14/56 20130101 |
International
Class: |
A61K 38/20 20060101
A61K038/20; A61K 38/21 20060101 A61K038/21; A61K 38/19 20060101
A61K038/19; A61K 39/395 20060101 A61K039/395; A61K 48/00 20060101
A61K048/00; A61P 35/00 20060101 A61P035/00; A61K 9/00 20060101
A61K009/00 |
Foreign Application Data
Date |
Code |
Application Number |
Aug 23, 2017 |
EP |
17306089.8 |
Claims
1.-88. (canceled)
89. A composition comprising RNA encoding an IL-12sc protein, RNA
encoding an IL-15 sushi protein, RNA encoding an IFN.alpha.
protein, and RNA encoding a GM-CSF protein.
90. The composition of claim 89, wherein the IFN.alpha. protein is
an IFN.alpha.2b protein.
91. The composition of claim 89, wherein (i) the RNA encoding an
IL-12sc protein comprises the nucleotide sequence of SEQ ID NO: 17
or 18, or a nucleotide sequence having at least 80% identity to the
nucleotide sequence of SEQ ID NO: 17 or 18 and/or (ii) the IL-12sc
protein comprises the amino acid sequence of SEQ ID NO: 14, or an
amino acid sequence having at least 80% identity to the amino acid
sequence of SEQ ID NO: 14.
92. The composition of claim 89, wherein (i) the RNA encoding an
IL-15 sushi protein comprises the nucleotide sequence of SEQ ID NO:
26, or a nucleotide sequence having at least 80% identity to the
nucleotide sequence of SEQ ID NO: 26 and/or (ii) the IL-15 sushi
protein comprises the amino acid sequence of SEQ ID NO: 24, or an
amino acid sequence having at least 80% identity to the amino acid
sequence of SEQ ID NO: 24.
93. The composition of claim 89, wherein (i) the RNA encoding an
IFN.alpha. protein comprises the nucleotide sequence of SEQ ID NO:
22 or 23, or a nucleotide sequence having at least 80% identity to
the nucleotide sequence of SEQ ID NO: 22 or 23 and/or (ii) the
IFN.alpha. protein comprises the amino acid sequence of SEQ ID NO:
19, or an amino acid sequence having at least 80% identity to the
amino acid sequence of SEQ ID NO: 19.
94. The composition of claim 89, wherein (i) the RNA encoding a
GM-CSF protein comprises the nucleotide sequence of SEQ ID NO: 29,
or a nucleotide sequence having at least 80% identity to the
nucleotide sequence of SEQ ID NO: 29 and/or (ii) the GM-CSF protein
comprises the amino acid sequence of SEQ ID NO: 27, or an amino
acid sequence having at least 80% identity to the amino acid
sequence of SEQ ID NO: 27.
95. The composition of claim 89, wherein at least one RNA comprises
a modified nucleoside in place of at least one uridine, wherein the
modified nucleoside is pseudouridine (.psi.),
N1-methyl-pseudouridine (m1.psi.), 5-methyl-uridine (m5U), or a
combination thereof.
96. The composition of claim 89, wherein each RNA comprises a
modified nucleoside in place of at least one uridine, wherein the
modified nucleoside is pseudouridine (.psi.),
N1-methyl-pseudouridine (m1.psi.), 5-methyl-uridine (m5U), or a
combination thereof.
97. The composition of claim 89, wherein at least one RNA comprises
the 5' cap m.sub.2.sup.7,3'-OGppp(m1.sup.2'-OApG, or
3'-O-Me-m.sup.7G(5')ppp(5')G, or
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG, or
3'-O-Me-m.sup.7G(5')ppp(5')G.
98. The composition of claim 89, wherein at least one RNA comprises
a 5' UTR comprising (i) a nucleotide sequence selected from the
group consisting of SEQ ID NOs: 2, 4, and 6, or (ii) a nucleotide
sequence having at least 80% identity to a nucleotide sequence
selected from the group consisting of SEQ ID NOs: 2, 4, and 6
and/or a 3' UTR comprising (i) the nucleotide sequence of SEQ ID
NO: 8, or (ii) a nucleotide sequence having at least 80% identity
to the nucleotide sequence of SEQ ID NO: 8.
99. The composition of claim 89, wherein at least one RNA comprises
a poly-A tail of at least 100 nucleotides.
100. The composition of claim 99, wherein the poly-A tail comprises
the poly-A tail shown in SEQ ID NO: 78.
101. The composition of claim 89, wherein one or more RNA
comprises: a 5' cap
comprising)m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G; a 5' UTR comprising (i) a nucleotide
sequence selected from the group consisting of SEQ ID NOs: 2, 4,
and 6, or (ii) a nucleotide sequence having at least 80% identity
to a nucleotide sequence selected from the group consisting of SEQ
ID NOs: 2, 4, and 6; a 3' UTR comprising (i) the nucleotide
sequence of SEQ ID NO: 8, or (ii) a nucleotide sequence having at
least 80% identity to the nucleotide sequence of SEQ ID NO:8; and a
poly-A tail comprising at least 100 nucleotides.
102. The composition of claim 101, wherein the poly-A tail
comprises SEQ ID NO: 78.
103. A pharmaceutical composition comprising the composition of
claim 89 and a pharmaceutically acceptable carrier, diluent and/or
excipient.
104. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof the
composition of claim 89.
105. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof a first
RNA, wherein the first RNA encodes an IL-12sc protein, an IL-15
sushi protein, an IFN.alpha. protein, or a GM-CSF protein, and
additional RNA, wherein: if the first RNA encodes an IL-12sc
protein, then the additional RNA encodes an IL-15 sushi protein, an
IFN.alpha. protein, and a GM-CSF protein; if the first RNA encodes
an IL-15 sushi protein, then the additional RNA encodes an IL-12sc
protein, an IFN.alpha. protein, and a GM-CSF protein; if the first
RNA encodes an IFN.alpha. protein, then the additional RNA encodes
an IL-15 sushi protein, an IL-12sc protein, and a GM-CSF protein;
and if the first RNA encodes a GM-CSF protein, then the additional
RNA encodes an IL-15 sushi protein, an IFN.alpha. protein, and an
IL-12sc protein.
106. The method of claim 105, wherein the first RNA is administered
to the subject at the same time as the additional RNA.
107. The method of claim 104, wherein the RNA is administered
intra-tumorally or peri-tumorally.
108. The method of claim 104, wherein the subject is further
treated with an additional therapy comprising (i) surgery to
excise, resect, or debulk a tumor, (ii) immunotherapy, (iii)
radiotherapy, or (iv) chemotherapy.
109. The method of claim 104, wherein the subject is further
treated with a checkpoint modulator.
110. The method of claim 109, wherein the checkpoint modulator is
an anti-PD1 antibody, an anti-CTLA-4 antibody, or a combination of
an anti-PD1 antibody and an anti-CTLA-4 antibody.
111. The method of claim 109, wherein the RNA is administered
intra-tumorally or peri-tumorally via injection, and the checkpoint
modulator is administered systemically.
112. The method of claim 104, wherein the solid tumor is a sarcoma,
carcinoma, or lymphoma.
113. The method of claim 104, wherein the solid tumor is in the
lung, colon, ovary, cervix, uterus, peritoneum, testicles, penis,
tongue, pancreas, bone, breast, prostate, soft tissue, connective
tissue, kidney, liver, brain, thyroid, or skin.
114. The method of claim 104, wherein the solid tumor is an
epithelial tumor, Hodgkin lymphoma (HL), non-Hodgkin lymphoma,
prostate tumor, ovarian tumor, renal cell tumor, gastrointestinal
tract tumor, hepatic tumor, colorectal tumor, tumor with
vasculature, mesothelioma tumor, pancreatic tumor, breast tumor,
sarcoma tumor, lung tumor, colon tumor, brain tumor, melanoma
tumor, small cell lung tumor, neuroblastoma tumor, testicular
tumor, carcinoma tumor, adenocarcinoma tumor, glioma tumor,
seminoma tumor, retinoblastoma, or osteosarcoma tumor.
115. The method of claim 104, wherein treating or reducing the
likelihood of the solid tumor comprises reducing the size of a
tumor, reducing the likelihood of a reoccurrence of cancer in
remission, or reducing the likelihood of cancer metastasis in the
subject.
116. A method for treating or reducing the likelihood of a solid
tumor, comprising administering to a subject in need thereof RNAs
and a further therapy, wherein the RNAs encode an IL-12sc protein,
an IL-15 sushi protein, an IFN.alpha. protein, and a GM-CSF
protein, and the further therapy comprises immunotherapy,
chemotherapy, or a checkpoint modulator.
117. An isolated nucleic acid comprising a sequence encoding an
IL-12sc protein, wherein: the sequence encoding the IL-12sc protein
comprises a) contiguous nucleotides having at least 78% identity to
nucleotides 1-984 of SEQ ID NO: 16 or 18, b) contiguous nucleotides
having at least 81% identity to nucleotides 1027-1623 of SEQ ID NO:
16 or 18, and c) nucleotides encoding a linker between the
nucleotides of a) and b).
118. An isolated nucleic acid comprising a sequence encoding an
IFN.alpha. protein, wherein: the sequence encoding the IFN.alpha.
protein has at least 80% identity to the nucleotide sequence of SEQ
ID NO: 21 or 23.
119. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof the
nucleic acid of claim 117, wherein the nucleic acid is RNA, and
wherein: the subject is further treated with additional RNA
encoding an IL-15 sushi protein, an IFN.alpha. protein, and a
GM-CSF protein.
120. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof the
nucleic of claim 118, wherein the nucleic acid is RNA, and wherein:
the subject is further treated with additional RNA encoding an
IL-15 sushi protein, an IL-12sc protein, and a GM-CSF protein.
121. A method of producing an RNA encoding IL-12sc, comprising
contacting an expression construct comprising the DNA nucleic acid
of claim 117 operably linked to a promoter with an RNA polymerase
under conditions permissive for transcription.
122. A method of producing an RNA encoding IFN.alpha., comprising
contacting an expression construct comprising the DNA nucleic acid
of claim 118 operably linked to a promoter with an RNA polymerase
under conditions permissive for transcription.
123. An expression construct comprising the nucleic acid of claim
117 operably linked to a promoter.
124. An expression construct comprising the nucleic acid of claim
118 operably linked to a promoter.
125. A kit comprising the composition of claim 89.
126. A kit comprising RNA encoding an IL-12sc protein, RNA encoding
an IL-15 sushi protein, RNA encoding an IFN.alpha. protein, and RNA
encoding a GM-CSF protein, wherein the RNAs are not in the same
container.
127. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof RNA
encoding an IL-12sc protein, RNA encoding an IL-15 sushi protein,
RNA encoding an IFN.alpha. protein, and RNA encoding a GM-CSF
protein, wherein the solid tumor is in a lymph node.
128. A method for treating or reducing the likelihood of a solid
tumor comprising administering to a subject in need thereof RNA
encoding an IL-12sc protein, RNA encoding an IL-15 sushi protein,
RNA encoding an IFN.alpha. protein, and RNA encoding a GM-CSF
protein, wherein the RNA is administered via intra- or peri-tumoral
injection into a first tumor, and wherein the injected first tumor
and a non-injected second tumor are both reduced in size.
Description
[0001] This application is a Continuation of International
Application No. PCT/US2018/019878, filed on Feb. 27, 2018, which
claims the benefit of priority to U.S. Provisional Application No.
62/464,981, filed Feb. 28, 2017; U.S. Provisional Application No.
62/597,527, filed Dec. 12, 2017; and European Patent Application
No. 17306089.8, filed Aug. 23, 2017; all of which are incorporated
by reference in their entirety.
[0002] This disclosure relates to the field of therapeutic RNA to
treat solid tumors. The National Cancer Institute defines solid
tumors as abnormal masses of tissue that do not normally contain
cysts or liquid areas. Solid tumors include benign and malignant
(cancerous) sarcomas, carcinomas, and lymphomas, and can be
physically located in any tissue or organ including the brain,
ovary, breast, colon, and other tissues. Cancer is often divided
into two main types: solid tumor cancer and hematological (blood)
cancers. It is estimated that more than 1.5 million cases of cancer
are diagnosed in the United States each year, and more than 500,000
people in the United States will die each year from cancer.
[0003] Solid tumor cancers are particularly difficult to treat.
Current treatments include surgery, radiotherapy, immunotherapy and
chemotherapy. Surgery alone may be an appropriate treatment for
small localized tumors, but large invasive tumors and most
metastatic malignancies are usually unresectable by surgery. Other
common treatments such as radiotherapy and chemotherapy are
associated with undesirable side effects and damage to healthy
cells.
[0004] While surgery and current therapies sometimes are able to
kill the bulk of the solid tumor, additional cells (including
potentially cancer stem cells) may survive therapy. These cells,
over time, can form a new tumor leading to cancer recurrence. In
spite of multimodal conventional therapies, disease-free survival
is less than 25% for many types of solid tumors. Solid tumors that
are resistant to multi-modal therapy or that have recurred
following therapy are even more difficult to treat, and long-term
survival is less than 10%.
[0005] Disclosed herein are compositions, uses, and methods that
can overcome present shortcomings in treatment of solid tumors.
Administration of therapeutic RNAs disclosed herein can reduce
tumor size, extend survival time, and/or protect against metastasis
and/or recurrence of the tumor.
SUMMARY
Embodiment 1
[0006] A composition comprising RNA encoding an IL-12sc protein
that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identical to the amino acids of SEQ ID NO: 14 and RNA encoding a
GM-CSF protein that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%,
or 80% identical to the amino acids of SEQ ID NO: 27.
Embodiment 2
[0007] The composition of embodiment 1, further comprising RNA
encoding an IL-15 sushi protein that is at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, or 80% identical to the amino acids of SEQ ID
NO: 24.
Embodiment 3
[0008] The composition of embodiment 1, further comprising RNA
encoding an IL-2 protein that is at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identical to the amino acids of SEQ ID NO: 9.
Embodiment 4
[0009] The composition of embodiment 1, further comprising RNA
encoding an IFN.alpha.2b protein that is at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, or 80% identical to the amino acids of SEQ ID
NO: 19.
Embodiment 5
[0010] A composition comprising: [0011] a. RNA encoding an IL-12sc
protein that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identical to the amino acids of SEQ ID NO: 14; [0012] b. RNA
encoding a GM-CSF protein that is at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identical to the amino acids of SEQ ID NO: 27; and
[0013] c. RNA encoding an IFN.alpha.2b protein that is at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the amino
acids of SEQ ID NO: 19.
Embodiment 6
[0014] The composition of embodiment 5, further comprising RNA
encoding an IL-15sushi protein that is at least 99%, 98%, 97%, 96%,
95%, 90%, 85%, or 80% identical to the amino acids of SEQ ID NO:
24.
Embodiment 7
[0015] The composition of embodiment 5, further comprising RNA
encoding an IL-2 protein that is at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identical to the amino acids of SEQ ID NO: 9.
Embodiment 8
[0016] The composition of any one of embodiments 1-7, wherein at
least one RNA comprises a modified nucleobase in place of at least
one uridine.
Embodiment 9
[0017] The composition of any one of embodiments 1-7, wherein each
RNA comprises a modified nucleobase in place of each uridine.
Embodiment 10
[0018] The composition of any one of embodiments 8-9, wherein the
modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U).
Embodiment 11
[0019] The composition of embodiment 10, wherein the modified
nucleobase is N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 12
[0020] The composition of any one of embodiments 1-11, wherein at
least one RNA further comprises a 5' cap.
Embodiment 13
[0021] The composition of any one of embodiments 1-11, wherein each
RNA further comprises a 5' cap.
Embodiment 14
[0022] The composition of any one of embodiments 12-13, wherein the
5' cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 15
[0023] The composition of any one of embodiments 1-14, wherein at
least one RNA further comprises a 5' UTR.
Embodiment 16
[0024] The composition of any one of embodiments 1-14, wherein each
RNA further comprises a 5' UTR.
Embodiment 17
[0025] The composition of any one of embodiments 15-16, wherein the
5' UTR comprises or consists of the nucleotides of SEQ ID NOs: 2,
4, or 6, or nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, or 85% identity to SEQ ID NOs: 2, 4, or 6.
Embodiment 18
[0026] The composition of any one of embodiments 1-17, wherein at
least one RNA further comprises a 3' UTR.
Embodiment 19
[0027] The composition of any one of embodiments 1-17, wherein each
RNA further comprises a 3' UTR.
Embodiment 20
[0028] The composition of any one of embodiments 18-19, wherein the
3' UTR comprises or consists of the nucleotides of SEQ ID NO: 8, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NO: 8.
Embodiment 21
[0029] The composition of any one of embodiments 1-20, wherein at
least one RNA further comprises a poly-A tail.
Embodiment 22
[0030] The composition of any one of embodiments 1-20, wherein each
RNA further comprises a poly-A tail.
Embodiment 23
[0031] The composition of any one of embodiments 21-22, wherein the
poly-A tail comprises at least 100 nucleotides.
Embodiment 24
[0032] The composition of any one of embodiments 1-23, wherein at
least one RNA comprises a 5' cap, 5' UTR, 3' UTR, and poly-A
tail.
Embodiment 25
[0033] The composition of any one of embodiments 1-23, wherein each
RNA comprises a 5' cap, 5' UTR, 3' UTR, and poly-A tail.
Embodiment 26
[0034] The composition of any one of embodiments 24-25, wherein
[0035] a. the 5' cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG
or 3'-O-Me-m.sup.7G(5')ppp(5')G; [0036] b. the 5' UTR comprises or
consists of the nucleotides of SEQ ID NOs: 2, 4, or 6, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NOs: 2, 4, or 6; [0037] c. the 3' UTR comprises
or consists of the nucleotides of SEQ ID NO: 8, or nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
SEQ ID NO: 8; and [0038] d. the poly-A tail comprises at least 100
nucleotides.
Embodiment 27
[0039] A method for treating or preventing cancer, reducing the
size of a tumor, preventing the reoccurrence of cancer in
remission, or preventing cancer metastasis in a subject comprising
administering the composition of any one of embodiments 1-26 to the
subject.
Embodiment 28
[0040] A method for treating or preventing cancer, reducing the
size of a tumor, preventing the reoccurrence of cancer in
remission, or preventing cancer metastasis in a subject comprising
administering to the subject: [0041] a. an RNA encoding an IL-12sc
protein that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identical to the amino acids of SEQ ID NO: 14, and/or comprising
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or
80% identity to the nucleotides of SEQ ID NOs: 17 or 18; and [0042]
b. an RNA encoding a GM-CSF protein that is at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, or 80% identical to the amino acids of SEQ ID
NO: 27, and/or comprising nucleotides having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotides of SEQ
ID NO: 29, thereby treating or preventing cancer, reducing the size
of a tumor, preventing the reoccurrence of cancer in remission, or
preventing cancer metastasis in the subject.
Embodiment 29
[0043] The method of embodiment 28, further comprising
administering RNA encoding an IFN.alpha.2b protein that is at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the amino
acids of SEQ ID NO: 19, and/or comprising nucleotides having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 30
[0044] The method of embodiment 28, further comprising
administering RNA encoding an IL-15 sushi protein that is at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the amino
acids of SEQ ID NO: 24, and/or comprising nucleotides having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotides of SEQ ID NO: 26.
Embodiment 31
[0045] The method of embodiment 28, further comprising
administering RNA encoding an IL-2 protein that is at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the amino acids
of SEQ ID NO: 9, and/or comprising nucleotides having at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotides of
SEQ ID NOs: 12 or 13.
Embodiment 32
[0046] The method of embodiment 28, further comprising
administering RNA encoding [0047] a. an IL-15 sushi protein that is
at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the
amino acids of SEQ ID NO: 24, and/or comprising nucleotides having
at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotides of SEQ ID NO: 26; and [0048] b. an IFN.alpha.2b protein
that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identical to the amino acids of SEQ ID NO: 19, and/or comprising
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or
80% identity to the nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 33
[0049] The method of embodiment 28, further comprising
administering RNA encoding [0050] a. an IL-2 protein that is at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identical to the
amino acids of SEQ ID NO: 9, and/or comprising nucleotides having
at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotides of SEQ ID NOs: 12 or 13; and [0051] b. an IFN.alpha.2b
protein that is at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identical to the amino acids of SEQ ID NO: 19, and/or comprising
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or
80% identity to the nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 34
[0052] The method of any one of embodiments 27-33, wherein the
cancer is a sarcoma, carcinoma, or lymphoma.
Embodiment 35
[0053] The method of any one of embodiments 27-33, wherein the
cancer is a solid tumor.
Embodiment 36
[0054] The method of embodiment 35, wherein the solid tumor is in
the lung, colon, ovary, cervix, uterus, peritoneum, testicles,
penis, tongue, lymph node, pancreas bone, breast, prostate, soft
tissue, connective tissue, kidney, liver, brain, thyroid, or
skin.
Embodiment 37
[0055] The method of embodiment 35, wherein the solid tumor is an
epithelial tumor, Hodgkin lymphoma (HL), non-Hodgkin lymphoma,
prostate tumor, ovarian tumor, renal cell tumor, gastrointestinal
tract tumor, hepatic tumor, colorectal tumor, tumor with
vasculature, mesothelioma tumor, pancreatic tumor, breast tumor,
sarcoma tumor, lung tumor, colon tumor, brain tumor, melanoma
tumor, small cell lung tumor, neuroblastoma, testicular tumor,
carcinoma, adenocarcinoma, glioma tumor, seminoma tumor,
retinoblastoma, or osteosarcoma tumor.
Embodiment 38
[0056] The method of any one of embodiments 27-37, wherein the
composition is administered intra-tumorally or peri-tumorally.
Embodiment 39
[0057] The method of embodiment 38, wherein the injected tumor and
a non-injected tumor are both reduced in size after intra- or
peri-tumoral injection into or near the first tumor.
Embodiment 40
[0058] The method of any one of embodiments 27-39, wherein the
subject is human.
Embodiment 41
[0059] The method of any one of embodiments 27-40, wherein another
therapy is also administered.
Embodiment 42
[0060] The method of embodiment 41, wherein the other therapy is
surgery to excise, resect, or debulk the tumor.
Embodiment 43
[0061] The method of embodiment 41, wherein the other therapy is
immunotherapy, radiotherapy or chemotherapy.
Embodiment 44
[0062] The method of any one of embodiments 27-43, wherein at least
one RNA comprises a modified nucleobase in place of at least one
uridine.
Embodiment 45
[0063] The method of any one of embodiments 27-43, wherein each RNA
comprises a modified nucleobase in place of each uridine.
Embodiment 46
[0064] The method of any one of embodiments 44-45, wherein the
modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.), or 5-methyl-uridine
(m.sup.5U).
Embodiment 47
[0065] The method of embodiment 46, wherein the modified nucleobase
is N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 48
[0066] The method of any one of embodiments 27-47, wherein at least
one RNA further comprises a 5' cap.
Embodiment 49
[0067] The method of any one of embodiments 27-47, wherein each RNA
further comprises a 5' cap.
Embodiment 50
[0068] The method of any one of embodiments 48-49, wherein the 5'
cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 51
[0069] The method of any one of embodiments 27-50, wherein at least
one RNA further comprises a 5' UTR.
Embodiment 52
[0070] The method of any one of embodiments 27-50, wherein each RNA
further comprises a 5' UTR.
Embodiment 53
[0071] The method of any one of embodiments 51-52, wherein the 5'
UTR comprises or consists of the nucleotides of SEQ ID NOs: 2, 4,
or 6, or nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%,
or 85% identity to SEQ ID NOs: 2, 4, or 6.
Embodiment 54
[0072] The method of any one of embodiments 27-54, wherein at least
one RNA further comprises a 3' UTR.
Embodiment 55
[0073] The method of any one of embodiments 27-54, wherein each RNA
further comprises a 3' UTR.
Embodiment 56
[0074] The method of any one of embodiments 54-55, wherein the 3'
UTR comprises or consists of the nucleotides of SEQ ID NO: 8, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NO: 8.
Embodiment 57
[0075] The method of any one of embodiments 27-56, wherein at least
one RNA further comprises a poly-A tail.
Embodiment 58
[0076] The method of any one of embodiments 27-56, wherein each RNA
further comprises a poly-A tail.
Embodiment 59
[0077] The method of any one of embodiments 57-58, wherein the
poly-A tail comprises at least 100 nucleotides.
Embodiment 60
[0078] The method of any one of embodiments 27-59, wherein at least
one RNA comprises a 5' cap, 5' UTR, 3' UTR, and poly-A tail.
Embodiment 61
[0079] The method of any one of embodiments 27-59, wherein each RNA
comprises a 5' cap, 5' UTR, 3' UTR, and poly-A tail.
Embodiment 62
[0080] The method of any one of embodiments 60-61, wherein [0081]
a. the 5' cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G; [0082] b. the 5' UTR comprises or
consists of the nucleotides of SEQ ID NOs: 2, 4, or 6, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NOs: 2, 4, or 6; [0083] c. the 3' UTR comprises
or consists of the nucleotides of SEQ ID NO: 8, or nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
SEQ ID NO: 8; and [0084] d. the poly-A tail comprises at least 100
nucleotides.
Embodiment 63
[0085] A codon-optimized DNA comprising or consisting of contiguous
nucleotides having at least 83% identity to SEQ ID NO: 11.
Embodiment 64
[0086] The DNA of embodiment 63, comprising or consisting of
contiguous nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, or 85% identity to SEQ ID NO: 11.
Embodiment 65
[0087] A codon-optimized RNA comprising or consisting of contiguous
nucleotides having at least 83% identity to SEQ ID NO: 13.
Embodiment 66
[0088] The RNA of embodiment 65, comprising or consisting of
contiguous nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, or 85% identity to SEQ ID NO: 13.
Embodiment 67
[0089] An RNA produced from the DNA of any one of embodiments 63 or
64.
Embodiment 68
[0090] A codon-optimized DNA comprising or consisting of: [0091] a.
contiguous nucleotides having at least 78% identity to nucleotides
1-984 of SEQ ID NO: 16; [0092] b. contiguous nucleotides having at
least 81% identity to nucleotides 1027-1623 of SEQ ID NO: 16; and
[0093] c. nucleotides encoding a linker between the nucleotides of
a) and b).
Embodiment 69
[0094] The DNA of embodiment 68, wherein the linker comprises
nucleotides 985-1026 of SEQ ID NO: 16.
Embodiment 70
[0095] The DNA of any one of embodiments 68 and 69, wherein part a)
comprises contiguous nucleotides having at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, 80%, or 75% identity to nucleotides 1-984 of
SEQ ID NO: 16; and part b) comprises contiguous nucleotides having
at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 1027-1623 of SEQ ID NO: 16.
Embodiment 71
[0096] A codon-optimized RNA comprising or consisting of: [0097] a.
contiguous nucleotides having at least 78% identity to nucleotides
1-984 of SEQ ID NO: 18; [0098] b. contiguous nucleotides having at
least 81% identity to nucleotides 1027-1623 of SEQ ID NO: 18; and
[0099] c. nucleotides encoding a linker between the nucleotides of
a) and b).
Embodiment 72
[0100] The RNA of embodiment 71, wherein the linker comprises
nucleotides 985-1026 of SEQ ID NO: 18.
Embodiment 73
[0101] The RNA of any one of embodiments 71 and 72, wherein part a)
comprises contiguous nucleotides having at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, 80%, or 75% identity to nucleotides 1-984 of
SEQ ID NO: 18; and part b) comprises contiguous nucleotides having
at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 1027-1623 of SEQ ID NO: 18.
Embodiment 74
[0102] An RNA produced from the DNA of any one of embodiments
68-70.
Embodiment 75
[0103] A codon-optimized DNA comprising or consisting of contiguous
nucleotides having at least 80% identity to SEQ ID NO: 21.
Embodiment 76
[0104] The DNA of embodiment 75, comprising or consisting of
contiguous nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, or 85% identity to SEQ ID NO: 21.
Embodiment 77
[0105] A codon-optimized RNA comprising or consisting of contiguous
nucleotides having at least 80% identity to SEQ ID NO: 23.
Embodiment 78
[0106] The RNA of embodiment 77, comprising or consisting of
contiguous nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, or 85% identity to SEQ ID NO: 23.
Embodiment 79
[0107] An RNA produced from the DNA of any one of embodiments
75-76.
Embodiment 80
[0108] A DNA comprising or consisting of: [0109] a. contiguous
nucleotides comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 1-321 of SEQ ID NO: 25; [0110] b. contiguous
nucleotides comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 382-729 of SEQ ID NO: 25; and [0111] c. nucleotides
encoding a linker between the nucleotides of a) and b).
Embodiment 81
[0112] An RNA produced from the DNA of embodiment 80.
Embodiment 82
[0113] A RNA comprising or consisting of: [0114] a. contiguous
nucleotides comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 1-321 of SEQ ID NO: 26; [0115] b. contiguous
nucleotides comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
nucleotides 382-729 of SEQ ID NO: 26; and [0116] c. nucleotides
encoding a linker between the nucleotides of a) and b).
Embodiment 83
[0117] A DNA comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
SEQ ID NO: 28.
Embodiment 84
[0118] An RNA produced from the DNA of embodiment 83.
Embodiment 85
[0119] An RNA comprising or consisting of contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
SEQ ID NO: 29.
Embodiment 86
[0120] The RNA of any one of embodiments 67, 74, 79, 81, and 84
wherein the RNA is transcribed from the DNA in vitro.
Embodiment 87
[0121] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-85, wherein at least one uridine is replaced with a
modified nucleobase.
Embodiment 88
[0122] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-85, wherein each uridine is replaced with a modified
nucleobase.
Embodiment 89
[0123] The RNA of embodiment 87 or 88, wherein the modified
nucleobase is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.), or 5-methyl-uridine (m.sup.5U).
Embodiment 90
[0124] The RNA of embodiment 89, wherein the modified nucleobase is
N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 91
[0125] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-90, further comprising a 5' cap.
Embodiment 92
[0126] The RNA of embodiment 91, wherein the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O) ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 93
[0127] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-92, further comprising a 5' UTR.
Embodiment 94
[0128] The RNA of embodiment 93, wherein the 5' UTR comprises or
consists of the nucleotides of SEQ ID NOs: 2, 4, or 6, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NOs: 2, 4, or 6.
Embodiment 95
[0129] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-94, further comprising a 3' UTR.
Embodiment 96
[0130] The RNA of embodiment 95, wherein the 3' UTR comprises or
consists of the nucleotides of SEQ ID NO: 8, or nucleotides having
at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to SEQ ID
NO: 8.
Embodiment 97
[0131] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-96, further comprising a poly-A tail.
Embodiment 98
[0132] The RNA of embodiment 97, wherein the poly-A tail comprises
at least 100 nucleotides.
Embodiment 99
[0133] The RNA of any one of embodiments 65-67, 71-74, 78-79,
81-82, and 84-97, further comprising a 5' cap, 5' UTR, 3' UTR, and
poly-A tail.
Embodiment 100
[0134] The RNA of embodiment 99, wherein [0135] a. the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G; [0136] b. the 5' UTR comprises or
consists of the nucleotides of SEQ ID NOs: 2, 4, or 6, or
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85%
identity to SEQ ID NOs: 2, 4, or 6; [0137] c. the 3' UTR comprises
or consists of the nucleotides of SEQ ID NO: 8, or nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, or 85% identity to
SEQ ID NO: 8 and; [0138] d. the poly-A tail comprises at least 100
nucleotides.
Embodiment 101
[0139] A DNA comprising or consisting of: [0140] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 83% identity to SEQ ID NO: 11;
and [0141] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5, wherein when transcribed,
the nucleotides of parts a) and b) form a single transcript.
Embodiment 102
[0142] A DNA comprising or consisting of: [0143] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 78% identity to
nucleotides 1-984 of SEQ ID NO: 16; [0144] b. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 81% identity to
nucleotides 1027-1623 of SEQ ID NO: 16; and [0145] c. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NOs: 1,
3, or 5, wherein when transcribed, the nucleotides of part a), b)
and c) form a single transcript.
Embodiment 103
[0146] A DNA comprising or consisting of: [0147] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 21;
and [0148] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5, wherein when transcribed,
the nucleotides of part a) and b) form a single transcript.
Embodiment 104
[0149] A DNA comprising or consisting of: [0150] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 28;
and [0151] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5, wherein when transcribed,
the nucleotides of part a) and b) form a single transcript.
Embodiment 105
[0152] A DNA comprising or consisting of: [0153] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to nucleotides
1-321 of SEQ ID NO: 25; [0154] b. contiguous nucleotides comprising
or consisting of nucleotides having at least 99%, 98%, 97%, 96%,
95%, 90%, 85% or 80% identity to nucleotides 382-729 of SEQ ID NO:
25; and [0155] c. contiguous nucleotides having at least 80%
identity to SEQ ID NOs: 1, 3, or 5, wherein when transcribed, the
nucleotides of part a), b), and c) form a single transcript.
Embodiment 106
[0156] A DNA comprising or consisting of: [0157] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 83% identity to SEQ ID NO: 11;
and [0158] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NO: 7, wherein when transcribed, the
nucleotides of part a) and b) form a single transcript.
Embodiment 107
[0159] A DNA comprising or consisting of: [0160] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 78% identity to
nucleotides 1-984 of SEQ ID NO: 16; [0161] b. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 81% identity to
nucleotides 1027-1623 of SEQ ID NO: 16; and [0162] c. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 7,
wherein when transcribed, the nucleotides of part a), b) and c)
form a single transcript.
Embodiment 108
[0163] A DNA comprising or consisting of: [0164] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 21;
and [0165] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NO: 7, wherein when transcribed, the
nucleotides of part a) and b) form a single transcript.
Embodiment 109
[0166] A DNA comprising or consisting of: [0167] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 28;
and [0168] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NO: 7, wherein when transcribed, the
nucleotides of part a) and b) form a single transcript.
Embodiment 110
[0169] A DNA comprising or consisting of: [0170] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to nucleotides
1-321 of SEQ ID NO: 25; [0171] b. contiguous nucleotides comprising
or consisting of nucleotides having at least 99%, 98%, 97%, 96%,
95%, 90%, 85% or 80% identity to nucleotides 382-729 of SEQ ID NO:
25; and [0172] c. contiguous nucleotides comprising or consisting
of nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NO: 7, wherein when transcribed, the
nucleotides of part a), b), and c) form a single transcript.
Embodiment 111
[0173] A DNA comprising or consisting of: [0174] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 83% identity to SEQ ID NO: 11;
[0175] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5; and [0176] c. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 7,
wherein when transcribed, the nucleotides of part a), b), and c)
form a single transcript.
Embodiment 112
[0177] A DNA comprising or consisting of: [0178] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 78% identity to
nucleotides 1-984 of SEQ ID NO: 16; [0179] b. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, 80% or 81% identity to
nucleotides 1027-1623 of SEQ ID NO: 16; [0180] c. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NOs: 1,
3, or 5; and [0181] d. contiguous nucleotides comprising or
consisting of nucleotides having at least 99%, 98%, 97%, 96%, 95%,
90%, 85% or 80% identity to SEQ ID NO: 7, wherein when transcribed,
the nucleotides of part a), b), c), and d) form a single
transcript.
Embodiment 113
[0182] A DNA comprising or consisting of: [0183] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 21;
[0184] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5, wherein the nucleotides of
part b) regulate the expression of the nucleotides of part a); and
[0185] c. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NO: 7, wherein when transcribed, the
nucleotides of part a), b) and c) form a single transcript.
Embodiment 114
[0186] A DNA comprising or consisting of: [0187] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 28;
[0188] b. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5; and [0189] c. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 7,
wherein when transcribed, the nucleotides of part a), b), and c)
form a single transcript.
Embodiment 115
[0190] A DNA comprising or consisting of: [0191] a. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to nucleotides
1-321 of SEQ ID NO: 25; [0192] b. contiguous nucleotides comprising
or consisting of nucleotides having at least 99%, 98%, 97%, 96%,
95%, 90%, 85% or 80% identity to nucleotides 382-729 of SEQ ID NO:
25; [0193] c. contiguous nucleotides comprising or consisting of
nucleotides having at least 99%, 98%, 97%, 96%, 95%, 90%, 85% or
80% identity to SEQ ID NOs: 1, 3, or 5; and [0194] d. contiguous
nucleotides comprising or consisting of nucleotides having at least
99%, 98%, 97%, 96%, 95%, 90%, 85% or 80% identity to SEQ ID NO: 7,
wherein when transcribed, the nucleotides of part a), b), c), and
d) form a single transcript.
Embodiment 116
[0195] An RNA produced from any one of the DNAs of embodiments
101-115.
Embodiment 117
[0196] The RNA of embodiment 116, wherein at least one uridine is
replaced with a modified nucleobase.
Embodiment 118
[0197] The RNA of embodiment 116, wherein each uridine is replaced
with a modified nucleobase.
Embodiment 119
[0198] The RNA of any one of embodiments 117-118, wherein the
modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.), or 5-methyl-uridine
(m.sup.5U).
Embodiment 120
[0199] The RNA of embodiment 119, wherein the modified nucleobase
is N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 121
[0200] The RNA of any one of embodiments 116-120, wherein the RNA
further comprises a 5' cap.
Embodiment 122
[0201] The RNA of embodiment 121, wherein the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 123
[0202] The RNA of any of embodiments 116-122, wherein the RNA is
substantially free of double-stranded RNA.
Embodiment 124
[0203] The RNA of any of embodiments 116-122, wherein double
stranded RNA has been removed from the RNA.
Embodiment 125
[0204] The RNA of any one of embodiments 123-124, wherein the RNA
has been purified via HPLC or cellulose-based chromatography.
Embodiment 126
[0205] A pharmaceutical formulation comprising any one of the DNA
or RNAs of embodiments 63-125 and a pharmaceutically acceptable
excipient.
Embodiment 127
[0206] A method for treating or preventing cancer, reducing the
size of a tumor, preventing the reoccurrence of cancer in
remission, or preventing cancer metastasis in a subject comprising
administering any one or more of the RNAs or DNAs of embodiments
63-125, or the pharmaceutical formulation of embodiment 126.
Embodiment 128
[0207] A method of producing a polypeptide encoding IL-2, IL-12sc,
IL-15 sushi, GM-CSF and IFN.alpha.2b in vivo comprising
administering to a subject one or more of the DNAs or RNAs of any
one of embodiment 63-125, the composition of any one of embodiments
1-26, or the pharmaceutical formulation of embodiment 126.
Embodiment 129
[0208] A composition comprising at least two RNAs, wherein the RNAs
encode different proteins, and wherein the RNAs are selected from
the RNAs of any one of embodiments 65-67, 71-74, 78-79, 81-82,
84-100, and 116-125.
Embodiment 130
[0209] The composition of embodiment 129, wherein the composition
comprises two RNAs encoding GM-CSF and IL-12sc.
Embodiment 131
[0210] The composition of embodiment 129, wherein the composition
comprises three RNAs encoding GM-CSF, IL-12sc, and
IFN.alpha.2b.
Embodiment 132
[0211] The composition of embodiment 129, wherein the composition
comprises three RNAs encoding GM-CSF, IL-2, and IFN.alpha.2b.
Embodiment 133
[0212] The composition of embodiment 129, wherein the composition
comprises four RNAs encoding GM-CSF, IL-12sc, IL-2 and
IFN.alpha.2b.
Embodiment 134
[0213] The composition of embodiment 129, wherein the composition
comprises four RNAs encoding GM-CSF, IL-12sc, IL-15 sushi and
IFN.alpha.2b.
Embodiment 135
[0214] The composition of any one of embodiments 130-134, wherein
the RNA encoding GM-CSF is selected from the RNA of any one of
embodiments 84-85.
Embodiment 136
[0215] The composition of any one of embodiments 130-134, wherein
the RNA encoding IL-12sc is selected from the RNA of any one of
embodiments 71-74.
Embodiment 137
[0216] The composition of any one of embodiments 131-134, wherein
the RNA encoding IFN.alpha.2b is selected from the RNA of any one
of embodiments 77-79.
Embodiment 138
[0217] The composition of embodiment 134, wherein the RNA encoding
IL-15 sushi is selected from the RNA of any one of embodiments
81-82.
Embodiment 139
[0218] The composition of any one of embodiments 132-133, wherein
the RNA encoding IL-2 is selected from the RNA of any one of
embodiments 65-67.
Embodiment 140
[0219] A method of treating or preventing solid tumor cancer
comprising administering a therapeutically effective amount of each
of the following RNAs directly into a tumor: [0220] a. an RNA
comprising an RNA encoding IL-12sc (SEQ ID NOs: 17 or 18); [0221]
b. an RNA comprising an RNA encoding GM-CSF (SEQ ID NO: 29); and
[0222] c. an RNA comprising an RNA encoding IFN.alpha.2b (SEQ ID
NOs: 22 or 23), wherein each RNA comprises a modified nucleobase in
place of each uridine, and wherein each RNA comprises a 5' UTR (SEQ
ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a
poly-A tail.
Embodiment 141
[0223] A method of treating or preventing solid tumor cancer
comprising administering a therapeutically effective amount of each
of the following RNAs directly into a tumor: [0224] a. an RNA
comprising an RNA encoding IL-12sc (SEQ ID NOs: 17 or 18); [0225]
b. an RNA comprising an RNA encoding GM-CSF (SEQ ID NO: 29); [0226]
c. an RNA comprising an RNA encoding IFN.alpha.2b (SEQ ID NOs: 22
or 23); and [0227] d. an RNA comprising an RNA encoding IL-2 (SEQ
ID NOs: 12 or 13), wherein each RNA comprises a modified nucleobase
in place of each uridine, and wherein each RNA comprises a 5' UTR
(SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a
poly-A tail.
Embodiment 142
[0228] A method of treating or preventing solid tumor cancer
comprising administering a therapeutically effective amount of each
of the following RNAs directly into a tumor: [0229] a. an RNA
comprising an RNA encoding IL-12sc (SEQ ID NOs: 17 or 18); [0230]
b. an RNA comprising an RNA encoding GM-CSF (SEQ ID NO: 29); [0231]
c. an RNA comprising an RNA encoding IFN.alpha.2b (SEQ ID NOs: 22
or 23); and [0232] d. an RNA comprising an RNA encoding IL-15 sushi
(SEQ ID NO: 26), wherein each RNA comprises a modified nucleobase
in place of each uridine, and wherein each RNA comprises a 5' UTR
(SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a
poly-A tail.
Embodiment 143
[0233] A composition comprising an RNA encoding an IL-2 protein
having at least 95% identity to the amino acids of SEQ ID NO: 9,
wherein each uridine is replaced with a modified nucleobase, and
further comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ
ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 144
[0234] A composition comprising an RNA encoding an IL-12sc protein
having at least 95% identity to the amino acids of SEQ ID NO: 14,
wherein each uridine is replaced with a modified nucleobase, and
further comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ
ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 145
[0235] A composition comprising an RNA encoding a GM-CSF protein
having at least 95% identity to the amino acids of SEQ ID NO: 27,
wherein each uridine is replaced with a modified nucleobase, and
further comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ
ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 146
[0236] A composition comprising an RNA encoding an IFN.alpha.2b
protein having at least 95% identity to the amino acids of SEQ ID
NO: 19, wherein each uridine is replaced with a modified
nucleobase, and further comprising a 5' UTR (SEQ ID NOs: 2, 4, or
6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 147
[0237] A composition comprising an RNA encoding an IL-15 sushi
protein having at least 95% identity to the amino acids of SEQ ID
NO: 24, wherein each uridine is replaced with a modified
nucleobase, and further comprising a 5' UTR (SEQ ID NOs: 2, 4, or
6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 148
[0238] An IL-12sc RNA composition comprising or consisting of
nucleotides having at least 95% identity to SEQ ID NOs: 17 or 18,
wherein each uridine is replaced with a modified nucleobase and
further comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ
ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 149
[0239] A GM-CSF RNA composition comprising or consisting of
nucleotides having at least 95% identity to SEQ ID NO: 29, wherein
each uridine is replaced with a modified nucleobase, and further
comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO:
8), a 5' cap, and a poly-A tail.
Embodiment 150
[0240] An IFN.alpha.2b RNA composition comprising or consisting of
nucleotides having at least 95% identity to SEQ ID NOs: 22 or 23,
wherein each uridine is replaced with a uridine analog, and further
comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO:
8), a 5' cap, and a poly-A tail.
Embodiment 151
[0241] An IL-15 sushi RNA composition comprising or consisting of
nucleotides having at least 95% identity to SEQ ID NO: 26, wherein
each uridine is replaced with a modified nucleobase, and further
comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO:
8), a 5' cap, and a poly-A tail.
Embodiment 152
[0242] An IL-2 RNA composition comprising or consisting of
nucleotides having at least 95% identity to SEQ ID NOs: 12 or 13,
wherein each uridine is replaced with a modified nucleobase, and
further comprising a 5' UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ
ID NO: 8), a 5' cap, and a poly-A tail.
Embodiment 153
[0243] An IL-12sc RNA composition comprising or consisting of the
nucleotides of SEQ ID NOs: 17 or 18, wherein each uridine is
replaced with a modified nucleobase, and further comprising a 5'
UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap,
and a poly-A tail.
Embodiment 154
[0244] A GM-CSF RNA composition comprising or consisting of the
nucleotides of SEQ ID NO: 29, wherein each uridine is replaced with
a modified nucleobase, and further comprising a 5' UTR (SEQ ID NOs:
2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a poly-A
tail.
Embodiment 155
[0245] An IFN.alpha.2b RNA composition comprising or consisting of
the nucleotides of SEQ ID NOs: 22 or 23, wherein each uridine is
replaced with a modified nucleobase, and further comprising a 5'
UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap,
and a poly-A tail.
Embodiment 156
[0246] An IL-15 sushi RNA composition comprising or consisting of
the nucleotides of SEQ ID NO: 26, wherein each uridine is replaced
with a modified nucleobase, and further comprising a 5' UTR (SEQ ID
NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap, and a poly-A
tail.
Embodiment 157
[0247] An IL-2 RNA composition comprising or consisting of the
nucleotides of SEQ ID NOs: 12 or 13, wherein each uridine is
replaced with a modified nucleobase, and further comprising a 5'
UTR (SEQ ID NOs: 2, 4, or 6), a 3' UTR (SEQ ID NO: 8), a 5' cap,
and a poly-A tail.
Embodiment 158
[0248] The composition of any of embodiments 143-157, wherein the
modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.), or 5-methyl-uridine
(m.sup.5U).
Embodiment 159
[0249] A composition comprising an RNA encoding IFN.alpha.2b,
wherein the RNA is altered to have reduced immunogenicity as
compared to un-altered RNA.
Embodiment 160
[0250] The composition of embodiment 159, wherein the alteration
comprises substitution of at least one uridine with a modified
nucleobase.
Embodiment 161
[0251] The composition of embodiment 159, wherein the modified
nucleobase is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.), or 5-methyl-uridine (m.sup.5U).
Embodiment 162
[0252] The composition of embodiment 161, wherein the modified
nucleobase is N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 163
[0253] The composition of any one of embodiments 159-162, wherein
the alteration comprises a reduction in the amount of
double-stranded RNA.
Embodiment 164
[0254] The composition of embodiment 163, wherein the reduction in
double-stranded RNA is the result of purification via HPLC or
cellulose-based chromatography.
Embodiment 165
[0255] The composition of any one of embodiments 159-164, wherein
the alteration reduces RNA recognition by an innate immune system
as compared to un-altered RNA.
Embodiment 166
[0256] The composition of any one of embodiments 159-165, wherein
the alteration comprises addition of a 5' cap to the RNA.
Embodiment 167
[0257] The composition of embodiment 166, wherein the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 168
[0258] The composition of any one of embodiments 159-167, further
comprising a second RNA encoding a peptide or protein of
interest.
Embodiment 169
[0259] The composition of embodiment 168, wherein the peptide or
protein of interest is a peptide or protein selected or derived
from cytokines, chemokines, suicide gene products, immunogenic
proteins or peptides, apoptosis inducers, angiogenesis inhibitors,
heat shock proteins, tumor antigens, .beta.-catenin inhibitors,
activators of the STING pathway, activators of the retinoic
inducible gene (RIG)-I pathway, agonists of toll-like receptor
(TLR) pathways, checkpoint modulators, innate immune activators,
antibodies, dominant negative receptors and decoy receptors,
inhibitors of myeloid derived suppressor cells (MDSCs), IDO pathway
inhibitors, and proteins or peptides that bind inhibitors of
apoptosis.
Embodiment 170
[0260] The composition of embodiment 168 or 169, wherein the second
RNA is altered to have reduced immunogenicity as compared to
un-altered RNA.
Embodiment 171
[0261] The composition of embodiment 170, wherein the alteration
comprises substitution of at least one uridine with a modified
nucleobase.
Embodiment 172
[0262] The composition of embodiment 171, wherein the modified
nucleobase is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U).
Embodiment 173
[0263] The composition of embodiment 172, wherein the modified
nucleobase is N1-methyl-pseudouridine (m.sup.1.psi.).
Embodiment 174
[0264] The composition of any one of embodiments 168-173, wherein
the alteration comprises a reduction in the amount of
double-stranded RNA.
Embodiment 175
[0265] The composition of embodiment 174, wherein the reduction in
double-stranded RNA is the result of purification via HPLC or
cellulose-based chromatography.
Embodiment 176
[0266] The composition of any one of embodiments 168-173, wherein
the alteration comprises addition of a 5' cap to the RNA.
Embodiment 177
[0267] The composition of embodiment 176, wherein the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment 178
[0268] The composition of any one of embodiments 168-177, wherein
the second RNA comprises: [0269] a. an RNA encoding an IL-12sc
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 14, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 17 or 18; [0270] b. an
RNA encoding a GM-CSF protein having at least 95% identity to the
amino acid sequence of SEQ ID NO: 27, and/or comprising nucleotides
having at least 95% identity to the nucleotides of SEQ ID NO: 29;
[0271] c. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; or [0272] d. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 179
[0273] A method for treating or preventing cancer, reducing the
size of a tumor, preventing the reoccurrence of cancer in
remission, or preventing cancer metastasis in a subject comprising
administering any one of the compositions of embodiments
159-178.
Embodiment 180
[0274] The composition of any one of embodiments 159-178 for use in
a method of treating or preventing cancer, reducing the size of a
tumor, preventing the reoccurrence of cancer in remission, or
preventing cancer metastasis.
Embodiment 181
[0275] A composition comprising an RNA encoding an IL-12sc protein
having at least 95% identity to the amino acid sequence of SEQ ID
NO: 14.
Embodiment 182
[0276] A composition comprising an RNA encoding a GM-CSF protein
having at least 95% identity to the amino acid sequence of SEQ ID
NO: 27.
Embodiment 183
[0277] A composition comprising an RNA encoding an IFN.alpha.2b
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 19.
Embodiment 184
[0278] A composition comprising an RNA encoding an IL-15 sushi
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 24.
Embodiment 185
[0279] A composition comprising an RNA encoding an IL-2 protein
having at least 95% identity to the amino acid sequence of SEQ ID
NO: 9.
Embodiment 186
[0280] A composition comprising an RNA encoding an IL-12sc protein,
wherein the RNA comprises nucleotides having at least 95% identity
to the nucleotides of SEQ ID NOs: 17 or 18.
Embodiment 187
[0281] A composition comprising an RNA encoding a GM-CSF protein,
wherein the RNA comprises nucleotides having at least 95% identity
to the nucleotides of SEQ ID NO: 29.
Embodiment 188
[0282] A composition comprising an RNA encoding an IFN.alpha.2b
protein, wherein the RNA comprises nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 189
[0283] A composition comprising an RNA encoding an IL-15 sushi
protein, wherein the RNA comprises nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 26.
Embodiment 190
[0284] A composition comprising an RNA encoding an IL-2 protein,
wherein the RNA comprises nucleotides having at least 95% identity
to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 191
[0285] A composition comprising any two of the following RNAs:
[0286] a. an RNA encoding an IL-12sc protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 14, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 17 or 18; [0287] b. an RNA encoding a
GM-CSF protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 27, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 29; [0288] c.
an RNA encoding an IFN.alpha.2b protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 19, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 22 or 23; [0289] d. an RNA encoding an
IL-15 sushi protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 24, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 26; and [0290]
e. an RNA encoding an IL-2 protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 9, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 12 or 13.
Embodiment 192
[0291] A composition comprising: [0292] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18; and
[0293] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29.
Embodiment 193
[0294] A composition comprising: [0295] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18; and
[0296] b. an RNA encoding an IFN.alpha.2b protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 19, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 194
[0297] A composition comprising: [0298] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18; and
[0299] b. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26.
Embodiment 195
[0300] A composition comprising: [0301] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18; and
[0302] b. an RNA encoding an IL-2 protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 9, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 196
[0303] A composition comprising: [0304] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; and [0305] b. an RNA
encoding an IFN.alpha.2b protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 19, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 22 or 23.
Embodiment 197
[0306] A composition comprising: [0307] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; and [0308] b. an RNA
encoding an IL-15 sushi protein having at least 95% identity to the
amino acid sequence of SEQ ID NO: 24, and/or comprising nucleotides
having at least 95% identity to the nucleotides of SEQ ID NO:
26.
Embodiment 198
[0309] A composition comprising: [0310] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; and [0311] b. an RNA
encoding an IL-2 protein having at least 95% identity to the amino
acid sequence of SEQ ID NO: 9, and/or comprising nucleotides having
at least 95% identity to the nucleotides of SEQ ID NOs: 12 or
13.
Embodiment 199
[0312] A composition comprising: [0313] a. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23; and
[0314] b. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NO: 26.
Embodiment 200
[0315] A composition comprising: [0316] a. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23; and
[0317] b. an RNA encoding an IL-2 protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 9, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 201
[0318] A composition comprising: [0319] a. an RNA encoding an IL-15
sushi protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 24, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 26; and [0320]
b. an RNA encoding an IL-2 protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 9, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 12 or 13.
Embodiment 202
[0321] A composition comprising any three of the following: [0322]
a. an RNA encoding an IL-12sc protein having at least 95% identity
to the amino acid sequence of SEQ ID NO: 14, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 17 or 18; [0323] b. an RNA encoding a GM-CSF protein having
at least 95% identity to the amino acid sequence of SEQ ID NO: 27,
and/or comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0324] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23;
[0325] d. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; and [0326] a. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 203
[0327] A composition comprising: [0328] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0329] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; and [0330] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23.
Embodiment 204
[0331] A composition comprising: [0332] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0333] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; and [0334] c. an RNA encoding an
IL-15 sushi protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 24, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 26.
Embodiment 205
[0335] A composition comprising: [0336] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0337] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; and [0338] c. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 206
[0339] A composition comprising: [0340] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0341] b. an RNA encoding an IFN.alpha.2b protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 19, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 22 or 23; and [0342] c. an RNA encoding
an IL-15 sushi protein having at least 95% identity to the amino
acid sequence of SEQ ID NO: 24, and/or comprising nucleotides
having at least 95% identity to the nucleotides of SEQ ID NO:
26.
Embodiment 207
[0343] A composition comprising: [0344] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0345] b. an RNA encoding an IFN.alpha.2b protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 19, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 22 or 23; and [0346] c. an RNA encoding
an IL-2 protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 9, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 208
[0347] A composition comprising: [0348] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0349] b. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; and [0350] c. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 209
[0351] A composition comprising: [0352] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; [0353] b. an RNA
encoding an IFN.alpha.2b protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 19, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 22 or 23; and [0354] c. an RNA encoding an IL-15 sushi
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 24, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 26.
Embodiment 210
[0355] A composition comprising: [0356] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; [0357] b. an RNA
encoding an IFN.alpha.2b protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 19, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 22 or 23; and [0358] c. an RNA encoding an IL-2 protein
having at least 95% identity to the amino acid sequence of SEQ ID
NO: 9, and/or comprising nucleotides having at least 95% identity
to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 211
[0359] A composition comprising: [0360] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; [0361] b. an RNA
encoding an IL-15 sushi protein having at least 95% identity to the
amino acid sequence of SEQ ID NO: 24, and/or comprising nucleotides
having at least 95% identity to the nucleotides of SEQ ID NO: 26;
and [0362] c. an RNA encoding an IL-2 protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 9, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 212
[0363] A composition comprising: [0364] a. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23;
[0365] b. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; and [0366] c. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 213
[0367] A composition comprising any four of the following: [0368]
a. an RNA encoding an IL-12sc protein having at least 95% identity
to the amino acid sequence of SEQ ID NO: 14, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 17 or 18; [0369] b. an RNA encoding a GM-CSF protein having
at least 95% identity to the amino acid sequence of SEQ ID NO: 27,
and/or comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0370] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23;
[0371] d. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; and [0372] e. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 214
[0373] A composition comprising: [0374] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0375] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0376] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23; and
[0377] d. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26.
Embodiment 215
[0378] A composition comprising: [0379] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0380] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0381] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23; and
[0382] d. an RNA encoding an IL-2 protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 9, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 216
[0383] A composition comprising: [0384] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0385] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0386] c. an RNA encoding an IL-15
sushi protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 24, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 26; and [0387]
d. an RNA encoding an IL-2 protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 9, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 12 or 13.
Embodiment 217
[0388] A composition comprising: [0389] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0390] b. an RNA encoding an IFN.alpha.2b protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 19, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NOs: 22 or 23; [0391] c. an RNA encoding an
IL-15 sushi protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 24, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NO: 26; and [0392]
d. an RNA encoding an IL-2 protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 9, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 12 or 13.
Embodiment 218
[0393] A composition comprising: [0394] a. an RNA encoding a GM-CSF
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 27, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NO: 29; [0395] b. an RNA
encoding an IFN.alpha.2b protein having at least 95% identity to
the amino acid sequence of SEQ ID NO: 19, and/or comprising
nucleotides having at least 95% identity to the nucleotides of SEQ
ID NOs: 22 or 23; [0396] c. an RNA encoding an IL-15 sushi protein
having at least 95% identity to the amino acid sequence of SEQ ID
NO: 24, and/or comprising nucleotides having at least 95% identity
to the nucleotides of SEQ ID NO: 26; and [0397] d. an RNA encoding
an IL-2 protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 9, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 219
[0398] A composition comprising: [0399] a. an RNA encoding an
IL-12sc protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 14, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 17 or 18;
[0400] b. an RNA encoding a GM-CSF protein having at least 95%
identity to the amino acid sequence of SEQ ID NO: 27, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 29; [0401] c. an RNA encoding an
IFN.alpha.2b protein having at least 95% identity to the amino acid
sequence of SEQ ID NO: 19, and/or comprising nucleotides having at
least 95% identity to the nucleotides of SEQ ID NOs: 22 or 23;
[0402] d. an RNA encoding an IL-15 sushi protein having at least
95% identity to the amino acid sequence of SEQ ID NO: 24, and/or
comprising nucleotides having at least 95% identity to the
nucleotides of SEQ ID NO: 26; and [0403] e. an RNA encoding an IL-2
protein having at least 95% identity to the amino acid sequence of
SEQ ID NO: 9, and/or comprising nucleotides having at least 95%
identity to the nucleotides of SEQ ID NOs: 12 or 13.
Embodiment 220
[0404] A pharmaceutical formulation comprising any one of the
compositions of embodiments 181-219.
Embodiment 221
[0405] A pharmaceutical formulation comprising any one of the
compositions of embodiments 181-219 and a pharmaceutically
acceptable excipient.
Embodiment 222
[0406] The composition of any one of embodiments 181-219, or the
pharmaceutical formulation of embodiment 220 or 221, for use in a
method of treating or preventing cancer.
Embodiment 223
[0407] The composition of any one of embodiments 181-219, or the
pharmaceutical formulation of embodiment 220 or 221 for use in a
method of reducing the size of a tumor.
Embodiment 224
[0408] The composition of any one of embodiments 181-219, or the
pharmaceutical formulation of embodiment 220 or 221 for use in a
method of preventing the reoccurrence of cancer in remission.
Embodiment 225
[0409] The composition of any one of embodiments 181-219, or the
pharmaceutical formulation of embodiment 220 or 221 for use in a
method of preventing cancer metastasis.
Embodiment 226
[0410] A method for treating or preventing cancer comprising
administering the composition of any one of embodiments 181-219, or
the pharmaceutical formulation of embodiment 220 or 221.
Embodiment 227
[0411] A method for reducing the size of a tumor comprising
administering the composition of any one of embodiments 181-219, or
the pharmaceutical formulation of embodiment 220 or 221.
Embodiment 228
[0412] A method for preventing the reoccurrence of cancer in
remission comprising administering the composition of any one of
embodiments 181-219, or the pharmaceutical formulation of
embodiment 220 or 221.
Embodiment 229
[0413] A method for preventing cancer metastasis comprising
administering the composition of any one of embodiments 181-219, or
the pharmaceutical formulation of embodiment 220 or 221.
[0414] Further embodiments of the present invention are as
follows:
Embodiment A 1
[0415] A medical preparation comprising RNA encoding an IL-12sc
protein and RNA encoding a GM-CSF protein.
Embodiment A 2
[0416] The medical preparation of embodiment A 1, further
comprising RNA encoding an IL-15 sushi protein.
Embodiment A 3
[0417] The medical preparation of embodiment A 1 or 2, further
comprising RNA encoding an IL-2 protein.
Embodiment A 4
[0418] The medical preparation of any one of embodiments A 1 to 3,
further comprising RNA encoding an IFN.alpha. protein.
Embodiment A 5
[0419] The medical preparation of embodiment A 4, wherein the
IFN.alpha. protein is an IFN.alpha.2b protein.
Embodiment A 6
[0420] The medical preparation of embodiment A 2, comprising RNA
encoding an IL-12sc protein, RNA encoding a GM-CSF protein, and RNA
encoding an IL-15 sushi protein.
Embodiment A 7
[0421] The medical preparation of embodiment A 3, comprising RNA
encoding an IL-12sc protein, RNA encoding a GM-CSF protein, and RNA
encoding an IL-2 protein.
Embodiment A 8
[0422] The medical preparation of embodiment A 4 or 5, comprising
RNA encoding an IL-12sc protein, RNA encoding a GM-CSF protein, and
RNA encoding an IFN.alpha. protein.
Embodiment A 9
[0423] The medical preparation of embodiment A 4 or 5, comprising
RNA encoding an IL-12sc protein, RNA encoding a GM-CSF protein, RNA
encoding an IL-15 sushi protein, and RNA encoding an IFN.alpha.
protein.
Embodiment A 10
[0424] The medical preparation of embodiment A 4 or 5, comprising
RNA encoding an IL-12sc protein, RNA encoding a GM-CSF protein, RNA
encoding an IL-2 protein, and RNA encoding an IFN.alpha.
protein.
Embodiment A 11
[0425] The medical preparation of any one of embodiments A 1-10,
wherein (i) the RNA encoding an IL-12sc protein comprises the
nucleotide sequence of SEQ ID NO: 17 or 18, or a nucleotide
sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identity to the nucleotide sequence of SEQ ID NO: 17 or 18 and/or
(ii) the IL-12sc protein comprises the amino acid sequence of SEQ
ID NO: 14, or an amino acid sequence having at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of
SEQ ID NO: 14.
Embodiment A 12
[0426] The medical preparation of any one of embodiments A 1-11,
wherein (i) the RNA encoding a GM-CSF protein comprises the
nucleotide sequence of SEQ ID NO: 29, or a nucleotide sequence
having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity
to the nucleotide sequence of SEQ ID NO: 29 and/or (ii) the GM-CSF
protein comprises the amino acid sequence of SEQ ID NO: 27, or an
amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%,
85%, or 80% identity to the amino acid sequence of SEQ ID NO:
27.
Embodiment A 13
[0427] The medical preparation of any one of embodiments A 2-12,
wherein (i) the RNA encoding an IL-15 sushi protein comprises the
nucleotide sequence of SEQ ID NO: 26, or a nucleotide sequence
having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity
to the nucleotide sequence of SEQ ID NO: 26 and/or (ii) the IL-15
sushi protein comprises the amino acid sequence of SEQ ID NO: 24,
or an amino acid sequence having at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identity to the amino acid sequence of SEQ ID NO:
24.
Embodiment A 14
[0428] The medical preparation of any one of embodiments A 3-13,
wherein (i) the RNA encoding an IL-2 protein comprises the
nucleotide sequence of SEQ ID NO: 12 or 13, or a nucleotide
sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identity to the nucleotide sequence of SEQ ID NO: 12 or 13 and/or
(ii) the IL-2 protein comprises the amino acid sequence of SEQ ID
NO: 9, or an amino acid sequence having at least 99%, 98%, 97%,
96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of
SEQ ID NO: 9.
Embodiment A 15
[0429] The medical preparation of any one of embodiments 4-14,
wherein (i) the RNA encoding an IFN.alpha. protein comprises the
nucleotide sequence of SEQ ID NO: 22 or 23, or a nucleotide
sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identity to the nucleotide sequence of SEQ ID NO: 22 or 23 and/or
(ii) the IFN.alpha. protein comprises the amino acid sequence of
SEQ ID NO: 19, or an amino acid sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence
of SEQ ID NO: 19.
Embodiment A 16
[0430] The medical preparation of any one of embodiments A 1-15,
wherein at least one RNA comprises a modified nucleobase in place
of at least one uridine.
Embodiment A 17
[0431] The medical preparation of any one of embodiments A 1-16,
wherein each RNA comprises a modified nucleobase in place of at
least one uridine.
Embodiment A 18
[0432] The medical preparation of any one of embodiments A 1-17,
wherein each RNA comprises a modified nucleobase in place of each
uridine.
Embodiment A 19
[0433] The medical preparation of any one of embodiments A 16-18,
wherein the modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m1.psi.) or 5-methyl-uridine
(m.sub.5U).
Embodiment A 20
[0434] The medical preparation of embodiment A 19, wherein the
modified nucleobase is N1-methyl-pseudouridine (m1.psi.).
Embodiment A 21
[0435] The medical preparation of any one of embodiments A 1-20,
wherein at least one RNA comprises a 5' cap.
Embodiment A 22
[0436] The medical preparation of any one of embodiments A 1-21,
wherein each RNA comprises a 5' cap.
Embodiment A 23
[0437] The medical preparation of embodiment A 21 or 22, wherein
the 5' cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment A 24
[0438] The medical preparation of any one of embodiments A 1-23,
wherein at least one RNA comprises a 5' UTR.
Embodiment A 25
[0439] The medical preparation of any one of embodiments A 1-24,
wherein each RNA comprises a 5' UTR.
Embodiment A 26
[0440] The medical preparation of embodiment A 24 or 25, wherein
the 5' UTR comprises a nucleotide sequence selected from the group
consisting of SEQ ID NOs: 2, 4, and 6, or a nucleotide sequence
having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity
to a nucleotide sequence selected from the group consisting of SEQ
ID NOs: 2, 4, and 6.
Embodiment A 27
[0441] The medical preparation of any one of embodiments A 1-26,
wherein at least one RNA comprises a 3' UTR.
Embodiment A 28
[0442] The medical preparation of any one of embodiments A 1-27,
wherein each RNA comprises a 3' UTR.
Embodiment A 29
[0443] The medical preparation of embodiment A 27 or 28, wherein
the 3' UTR comprises the nucleotide sequence of SEQ ID NO: 8, or a
nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%,
85%, or 80% identity to the nucleotide sequence of SEQ ID NO:
8.
Embodiment A 30
[0444] The medical preparation of any one of embodiments A 1-29,
wherein at least one RNA comprises a poly-A tail.
Embodiment A 31
[0445] The medical preparation of any one of embodiments A 1-30,
wherein each RNA comprises a poly-A tail.
Embodiment A 32
[0446] The medical preparation of embodiment A 30 or 31, wherein
the poly-A tail comprises at least 100 nucleotides.
Embodiment A 33
[0447] The medical preparation of any one of embodiments A 1-32,
wherein at least one RNA comprises a 5' cap, a 5' UTR, a 3' UTR,
and a poly-A tail.
Embodiment A 34
[0448] The medical preparation of any one of embodiments A 1-33,
wherein each RNA comprises a 5' cap, a 5' UTR, a 3' UTR, and a
poly-A tail.
Embodiment A 35
[0449] The medical preparation of embodiment A 33 or 34, wherein
[0450] a. the 5' cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG
or 3'-O-Me-m.sup.7G(5')ppp(5')G; [0451] b. the 5' UTR comprises a
nucleotide sequence selected from the group consisting of SEQ ID
NOs: 2, 4, and 6, or a nucleotide sequence having at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to a nucleotide
sequence selected from the group consisting of SEQ ID NOs: 2, 4,
and 6; [0452] c. the 3' UTR comprises the nucleotide sequence of
SEQ ID NO: 8, or a nucleotide sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence
of SEQ ID NO:8; and [0453] d. the poly-A tail comprises at least
100 nucleotides.
Embodiment A 36
[0454] The medical preparation of any one of embodiments A 1 to 35,
wherein the RNA is mRNA.
Embodiment A 37
[0455] The medical preparation of any one of embodiments A 1 to 36,
which comprises a further therapeutic agent.
Embodiment A 38
[0456] The medical preparation of embodiment A 37, wherein the
further therapeutic agent is an anti-cancer therapeutic agent.
Embodiment A 39
[0457] The medical preparation of embodiment A 37 or 38, wherein
the further therapeutic agent is a checkpoint modulator.
Embodiment A 40
[0458] The medical preparation of embodiment A 39, wherein the
checkpoint modulator is an anti-PD1 antibody, an anti-CTLA-4
antibody, or a combination of an anti-PD1 antibody and an
anti-CTLA-4 antibody.
Embodiment A 41
[0459] The medical preparation of any one of embodiments A 1 to 40,
which is a kit comprising at least two containers, each container
comprising at least one of said RNAs.
Embodiment A 42
[0460] The medical preparation of embodiment A 41, which comprises
each RNA in a separate container.
Embodiment A 43
[0461] The medical preparation of embodiment A 41 or 42, wherein
the further therapeutic agent is in a container not comprising the
RNA.
Embodiment A 44
[0462] The medical preparation of any one of embodiments A 41-43,
further comprising instructions for use of the medical preparation
for treating or preventing cancer.
Embodiment A 45
[0463] The medical preparation of any one of embodiments A 1 to 40,
which is a pharmaceutical composition comprising the RNAs.
Embodiment A 46
[0464] The medical preparation of embodiment A 45, wherein the
pharmaceutical composition further comprises one or more
pharmaceutically acceptable carriers, diluents and/or
excipients.
Embodiment A 47
[0465] The medical preparation of any one of embodiments A 1 to 46,
wherein the RNA is present in a form selected from a liquid form, a
solid form, or a combination thereof.
Embodiment A 48
[0466] The medical preparation of embodiment A 47, wherein the
solid form is a frozen form or a dehydrated form.
Embodiment A 49
[0467] The medical preparation of embodiment A 48, wherein the
dehydrated form is a freeze-dried or spray-dried form.
Embodiment A 50
[0468] The medical preparation of any one of embodiments A 1 to 49
for pharmaceutical use.
Embodiment A 51
[0469] The medical preparation of embodiment A 50, wherein the
pharmaceutical use comprises a therapeutic or prophylactic
treatment of a disease or disorder.
Embodiment A 52
[0470] The medical preparation of any one of embodiments A 1 to 51
for use in a method for treating or preventing cancer.
Embodiment A 53
[0471] The medical preparation of any one of embodiments A 38-52,
wherein the cancer is a sarcoma, carcinoma, or lymphoma.
Embodiment A 54
[0472] The medical preparation of any one of embodiments A 38-53,
wherein the cancer is a solid tumor.
Embodiment A 55
[0473] The medical preparation of embodiment A 54, wherein the
solid tumor is in the lung, colon, ovary, cervix, uterus,
peritoneum, testicles, penis, tongue, lymph node, pancreas, bone,
breast, prostate, soft tissue, connective tissue, kidney, liver,
brain, thyroid, or skin.
Embodiment A 56
[0474] The medical preparation of embodiment A 54 or 55, wherein
the solid tumor is an epithelial tumor, Hodgkin lymphoma (HL),
non-Hodgkin lymphoma, prostate tumor, ovarian tumor, renal cell
tumor, gastrointestinal tract tumor, hepatic tumor, colorectal
tumor, tumor with vasculature, mesothelioma tumor, pancreatic
tumor, breast tumor, sarcoma tumor, lung tumor, colon tumor, brain
tumor, melanoma tumor, small cell lung tumor, neuroblastoma tumor,
testicular tumor, carcinoma tumor, adenocarcinoma tumor, glioma
tumor, seminoma tumor, retinoblastoma, or osteosarcoma tumor.
Embodiment A 57
[0475] The medical preparation of any one of embodiments A 1-56,
wherein the RNA is for intra-tumoral or peri-tumoral
administration.
Embodiment A 58
[0476] The medical preparation of any one of embodiments A 37-57,
wherein the further therapeutic agent is for systemic
administration.
Embodiment A 59
[0477] The medical preparation of any one of embodiments A 1-58,
which is for administration to a human.
Embodiment A 60
[0478] The medical preparation of any one of embodiments A 44 and
47-59, wherein treating or preventing cancer comprises reducing the
size of a tumor, preventing the reoccurrence of cancer in
remission, or preventing cancer metastasis in a subject.
[0479] Further embodiments of the present invention are as
follows:
Embodiment B 1
[0480] RNA for use in a method for treating or preventing cancer in
a subject, wherein the method comprises administering RNA encoding
an IL-12sc protein and RNA encoding a GM-CSF protein.
Embodiment B 2
[0481] The RNA of Embodiment B 1, wherein the method further
comprises administering RNA encoding an IL-15 sushi protein.
Embodiment B 3
[0482] The RNA of Embodiment B 1 or 2, wherein the method further
comprises administering RNA encoding an IL-2 protein.
Embodiment B 4
[0483] The RNA of any one of embodiments B 1 to 3, wherein the
method further comprises administering RNA encoding an IFN.alpha.
protein.
Embodiment B 5
[0484] The RNA of Embodiment B 4, wherein the IFN.alpha. protein is
an IFN.alpha.2b protein.
Embodiment B 6
[0485] The RNA of Embodiment B 2, wherein the method comprises
administering RNA encoding an IL-12sc protein, RNA encoding a
GM-CSF protein, and RNA encoding an IL-15 sushi protein.
Embodiment B 7
[0486] The RNA of Embodiment B 3, wherein the method comprises
administering RNA encoding an IL-12sc protein, RNA encoding a
GM-CSF protein, and RNA encoding an IL-2 protein.
Embodiment B 8
[0487] The RNA of Embodiment B 4 or 5, wherein the method comprises
administering RNA encoding an IL-12sc protein, RNA encoding a
GM-CSF protein, and RNA encoding an IFN.alpha. protein.
Embodiment B 9
[0488] The RNA of Embodiment B 4 or 5, wherein the method comprises
administering RNA encoding an IL-12sc protein, RNA encoding a
GM-CSF protein, RNA encoding an IL-15 sushi protein, and RNA
encoding an IFN.alpha. protein.
Embodiment B 10
[0489] The RNA of Embodiment B 4 or 5, wherein the method comprises
administering RNA encoding an IL-12sc protein, RNA encoding a
GM-CSF protein, RNA encoding an IL-2 protein, and RNA encoding an
IFN.alpha. protein.
Embodiment B 11
[0490] The RNA of any one of embodiments B 1-10, wherein (i) the
RNA encoding an IL-12sc protein comprises the nucleotide sequence
of SEQ ID NO: 17 or 18, or a nucleotide sequence having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotide sequence of SEQ ID NO: 17 or 18 and/or (ii) the IL-12sc
protein comprises the amino acid sequence of SEQ ID NO: 14, or an
amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%,
85%, or 80% identity to the amino acid sequence of SEQ ID NO:
14.
Embodiment B 12
[0491] The RNA of any one of embodiments B 1-11, wherein (i) the
RNA encoding a GM-CSF protein comprises the nucleotide sequence of
SEQ ID NO: 29, or a nucleotide sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence
of SEQ ID NO: 29 and/or (ii) the GM-CSF protein comprises the amino
acid sequence of SEQ ID NO: 27, or an amino acid sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
amino acid sequence of SEQ ID NO: 27.
Embodiment B 13
[0492] The RNA of any one of embodiments B 2-12, wherein (i) the
RNA encoding an IL-15 sushi protein comprises the nucleotide
sequence of SEQ ID NO: 26, or a nucleotide sequence having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotide sequence of SEQ ID NO: 26 and/or (ii) the IL-15 sushi
protein comprises the amino acid sequence of SEQ ID NO: 24, or an
amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%,
85%, or 80% identity to the amino acid sequence of SEQ ID NO:
24.
Embodiment B 14
[0493] The RNA of any one of embodiments B 3-13, wherein (i) the
RNA encoding an IL-2 protein comprises the nucleotide sequence of
SEQ ID NO: 12 or 13, or a nucleotide sequence having at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide
sequence of SEQ ID NO: 12 or 13 and/or (ii) the IL-2 protein
comprises the amino acid sequence of SEQ ID NO: 9, or an amino acid
sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identity to the amino acid sequence of SEQ ID NO: 9.
Embodiment B 15
[0494] The RNA of any one of embodiments B 4-14, wherein (i) the
RNA encoding an IFN.alpha. protein comprises the nucleotide
sequence of SEQ ID NO: 22 or 23, or a nucleotide sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
nucleotide sequence of SEQ ID NO: 22 or 23 and/or (ii) the
IFN.alpha. protein comprises the amino acid sequence of SEQ ID NO:
19, or an amino acid sequence having at least 99%, 98%, 97%, 96%,
95%, 90%, 85%, or 80% identity to the amino acid sequence of SEQ ID
NO: 19.
Embodiment B 16
[0495] The RNA of any one of embodiments B 1-15, wherein at least
one RNA comprises a modified nucleobase in place of at least one
uridine.
Embodiment B 17
[0496] The RNA of any one of embodiments B 1-16, wherein each RNA
comprises a modified nucleobase in place of at least one
uridine.
Embodiment B 18
[0497] The RNA of any one of embodiments B 1-17, wherein each RNA
comprises a modified nucleobase in place of each uridine.
Embodiment B 19
[0498] The RNA of any one of embodiments B 16-18, wherein the
modified nucleobase is pseudouridine (.psi.),
N1-methyl-pseudouridine (m1.psi.) or 5-methyl-uridine
(m.sub.5U).
Embodiment B 20
[0499] The RNA of Embodiment B 19, wherein the modified nucleobase
is N1-methyl-pseudouridine (m1.psi.).
Embodiment B 21
[0500] The RNA of any one of embodiments B 1-20, wherein at least
one RNA comprises a 5' cap.
Embodiment B 22
[0501] The RNA of any one of embodiments B 1-21, wherein each RNA
comprises a 5' cap.
Embodiment B 23
[0502] The RNA of Embodiment B 21 or 22, wherein the 5' cap is
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G.
Embodiment B 24
[0503] The RNA of any one of embodiments B 1-23, wherein at least
one RNA comprises a 5' UTR.
Embodiment B 25
[0504] The RNA of any one of embodiments B 1-24, wherein each RNA
comprises a 5' UTR.
Embodiment B 26
[0505] The RNA of Embodiment B 24 or 25, wherein the 5' UTR
comprises a nucleotide sequence selected from the group consisting
of SEQ ID NOs: 2, 4, and 6, or a nucleotide sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to a
nucleotide sequence selected from the group consisting of SEQ ID
NOs: 2, 4, and 6.
Embodiment B 27
[0506] The RNA of any one of embodiments B 1-26, wherein at least
one RNA comprises a 3' UTR.
Embodiment B 28
[0507] The RNA of any one of embodiments B 1-27, wherein each RNA
comprises a 3' UTR.
Embodiment B 29
[0508] The RNA of embodiment B 27 or 28, wherein the 3' UTR
comprises the nucleotide sequence of SEQ ID NO: 8, or a nucleotide
sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80%
identity to the nucleotide sequence of SEQ ID NO: 8.
Embodiment B 30
[0509] The RNA of any one of embodiments B 1-29, wherein at least
one RNA comprises a poly-A tail.
Embodiment B 31
[0510] The RNA of any one of embodiments B 1-30, wherein each RNA
comprises a poly-A tail.
Embodiment B 32
[0511] The RNA of embodiment B 30 or 31, wherein the poly-A tail
comprises at least 100 nucleotides.
Embodiment B 33
[0512] The RNA of any one of embodiments B 1-32, wherein at least
one RNA comprises a 5' cap, a 5' UTR, a 3' UTR, and a poly-A
tail.
Embodiment B 34
[0513] The RNA of any one of embodiments B 1-33, wherein each RNA
comprises a 5' cap, a 5' UTR, a 3' UTR, and a poly-A tail.
Embodiment B 35
[0514] The RNA of embodiment B 33 or 34, wherein [0515] a. the 5'
cap is m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G; [0516] b. the 5' UTR comprises a
nucleotide sequence selected from the group consisting of SEQ ID
NOs: 2, 4, and 6, or a nucleotide sequence having at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to a nucleotide
sequence selected from the group consisting of SEQ ID NOs: 2, 4,
and 6; [0517] c. the 3' UTR comprises the nucleotide sequence of
SEQ ID NO: 8, or a nucleotide sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence
of SEQ ID NO:8; and [0518] d. the poly-A tail comprises at least
100 nucleotides.
Embodiment B 36
[0519] The RNA of any one of embodiments B 1 to 35, wherein the RNA
is mRNA.
Embodiment B 37
[0520] The RNA of any one of embodiments B 1 to 36, wherein the
method further comprises administering a further therapy.
Embodiment B 38
[0521] The RNA of embodiment B 37, wherein the further therapy
comprises one or more selected from the group consisting of: (i)
surgery to excise, resect, or debulk a tumor, (ii) immunotherapy,
(iii) radiotherapy, and (iv) chemotherapy.
Embodiment B 39
[0522] The RNA of embodiment B 37 or 38, wherein the further
therapy comprises administering a further therapeutic agent.
Embodiment B 40
[0523] The RNA of embodiment B 39, wherein the further therapeutic
agent is an anti-cancer therapeutic agent.
Embodiment B 41
[0524] The RNA of embodiment B 39 or 40, wherein the further
therapeutic agent is a checkpoint modulator.
Embodiment B 42
[0525] The RNA of embodiment B 41, wherein the checkpoint modulator
is an anti-PD1 antibody, an anti-CTLA-4 antibody, or a combination
of an anti-PD1 antibody and an anti-CTLA-4 antibody.
Embodiment B 43
[0526] The RNA of any one of embodiments B 1-42, wherein the cancer
is a sarcoma, carcinoma, or lymphoma.
Embodiment B 44
[0527] The RNA of any one of embodiments B 1-43, wherein the cancer
is a solid tumor.
Embodiment B 45
[0528] The RNA of embodiment B 44, wherein the solid tumor is in
the lung, colon, ovary, cervix, uterus, peritoneum, testicles,
penis, tongue, lymph node, pancreas, bone, breast, prostate, soft
tissue, connective tissue, kidney, liver, brain, thyroid, or
skin.
Embodiment B 46
[0529] The RNA of embodiment B 44 or 45, wherein the solid tumor is
an epithelial tumor, Hodgkin lymphoma (HL), non-Hodgkin lymphoma,
prostate tumor, ovarian tumor, renal cell tumor, gastrointestinal
tract tumor, hepatic tumor, colorectal tumor, tumor with
vasculature, mesothelioma tumor, pancreatic tumor, breast tumor,
sarcoma tumor, lung tumor, colon tumor, brain tumor, melanoma
tumor, small cell lung tumor, neuroblastoma tumor, testicular
tumor, carcinoma tumor, adenocarcinoma tumor, glioma tumor,
seminoma tumor, retinoblastoma, or osteosarcoma tumor.
Embodiment B 47
[0530] The RNA of any one of embodiments B 1-46, wherein the RNA is
administered intra-tumorally or peri-tumorally.
Embodiment B 48
[0531] The RNA of any one of embodiments B 39 to 47, wherein the
further therapeutic agent is administered systemically.
Embodiment B 49
[0532] The RNA of any one of embodiments B 1-48, wherein the
subject is a human.
Embodiment B 50
[0533] The RNA of any one of embodiments B 1-49, wherein the RNAs
are administered at the same time.
Embodiment B 51
[0534] The RNA of any one of embodiments B 1-50, wherein the RNAs
are administered by administering a composition comprising a
combination of the RNAs.
Embodiment B 52
[0535] The RNA of any one of embodiments B 1-49, wherein at least
two of the RNAs are administered at different times.
Embodiment B 53
[0536] The RNA of any one of embodiments B 1-49 and 52, wherein the
RNAs are administered by administering at least two compositions,
each composition comprising at least one of said RNAs.
Embodiment B 54
[0537] The RNA of any one of embodiments B 1 to 53, wherein
treating or preventing cancer comprises reducing the size of a
tumor, preventing the reoccurrence of cancer in remission, or
preventing cancer metastasis in a subject.
Embodiment B 55
[0538] The RNA of any one of embodiments B 1 to 54, which is or
comprises one or more of the RNAs administered in said method.
Embodiment B 56
[0539] The RNA of embodiment B 55, which is or comprises one or
more selected from the group consisting of the RNA encoding an
IL-12sc protein, the RNA encoding a GM-CSF protein, the RNA
encoding an IL-15 sushi protein, the RNA encoding an IL-2 protein,
and the RNA encoding an IFN.alpha. protein.
Embodiment B 57
[0540] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein.
Embodiment B 58
[0541] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding a GM-CSF protein.
Embodiment B 59
[0542] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-15 sushi protein.
Embodiment B 60
[0543] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-2 protein.
Embodiment B 61
[0544] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IFN.alpha. protein.
Embodiment B 62
[0545] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein and the RNA encoding a GM-CSF
protein.
Embodiment B 63
[0546] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein, the RNA encoding a GM-CSF protein,
and the RNA encoding an IL-15 sushi protein.
Embodiment B 64
[0547] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein, the RNA encoding a GM-CSF protein,
and the RNA encoding an IL-2 protein.
Embodiment B 65
[0548] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein, the RNA encoding a GM-CSF protein,
and the RNA encoding an IFN.alpha. protein.
Embodiment B 66
[0549] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein, the RNA encoding a GM-CSF protein,
the RNA encoding an IL-15 sushi protein, and the RNA encoding an
IFN.alpha. protein.
Embodiment B 67
[0550] The RNA of embodiment B 55 or 56, which is or comprises the
RNA encoding an IL-12sc protein, the RNA encoding a GM-CSF protein,
the RNA encoding an IL-2 protein, and the RNA encoding an
IFN.alpha. protein.
FIGURE LEGENDS
[0551] FIGS. 1A-1G shows results of experiments where B16F10 tumor
bearing mice were injected intratumorally with mRNA on days 8, 10,
12, 14 and individual tumor growth was monitored to day 41. FIG. 1A
and FIG. 1D show results when using IL-2, IL-12sc, and GM-CSF
(ModA) mRNA. FIG. 1B and FIG. 1E show IL-2, IL-12sc, and GM-CSF
(ModB) mRNA. FIG. 1C and FIG. 1F show results when using luciferase
mRNA (ModA). FIG. 1G shows results when using luciferase mRNA
(ModB). (N=10 mice/group for A-C and N=9 mice/group for D-G).
[0552] FIGS. 2A-2D show results of experiments where CT26 tumor
bearing mice were injected intratumorally with mRNA on day 19, 21,
24, 26, 28 and 31 and individual tumor growth was monitored to day
48. FIG. 2A shows GM-CSF, IL-2, IL-12sc (ModA). FIG. 2B shows
GM-CSF, IL-2, IL-12sc (ModB). FIG. 2C shows luciferase mRNA (ModA)
as a control. FIG. 2D shows Ringer's solution as a control.
[0553] FIGS. 3A-3C show results of experiments where CT26 tumor
bearing mice were injected intratumorally with mRNA on day 13, 15,
18, 20 and 22 and tumor growth was monitored to day 42. FIG. 3A
shows IL-2, GM-CSF, IL-12sc (ModB). FIG. 3B shows IL-15 sushi,
GM-CSF, IL-12sc (ModB). FIG. 3C shows luciferase mRNA (ModB) as a
control.
[0554] FIGS. 4A-4F show results of experiments where B16F10 tumor
bearing mice were injected intratumorally with cytokine mRNA
mixtures on days 11, 13, 15, 17 and individual tumor growth was
monitored to day 45. FIG. 4A shows IL-2, IL-12sc, and GM-CSF
(ModA). FIG. 4B is a duplicate in the same experiment as described
in FIG. 5A, showing IL-2, IL-12sc, and GM-CSF (ModB). FIG. 4C shows
IL-15 sushi, IL-12sc, and GM-CSF (ModA). FIG. 4D is a duplicate in
the same experiment as described in FIG. 5B, showing IL-15 sushi,
IL-12sc, and GM-CSF (ModB). FIG. 4E shows control luciferase mRNA
(ModA). FIG. 4F is a duplicate in the same experiment as described
in FIGS. 5D and 6D showing control luciferase mRNA (ModB). (N=8
mice/group).
[0555] FIGS. 5A-5D show results of experiments where B16F10 tumor
bearing mice were injected intratumorally with cytokine mRNA
mixtures on days 11, 13, 15, 17 and individual tumor growth was
monitored to day 45. FIG. 5A is a duplicate in the same experiment
as described in FIG. 4B, showing IL-2, IL-12sc, and GM-CSF (ModB).
FIG. 5B is a duplicate in the same experiment as described in FIG.
4D, showing IL-15 sushi, IL-12sc, and GM-CSF (ModB). FIG. 5C is a
duplicate in the same experiment as described in FIG. 6C, showing
IL-2, IL-12sc, GM-CSF, and IFN.alpha. (ModB). FIG. 5D is a
duplicate in the same experiment as described in FIGS. 4F and 6D,
showing luciferase mRNA (ModB) as control. (N=8 mice/group).
[0556] FIGS. 6A and 6B show results of experiments where CT26 tumor
bearing mice were injected intratumorally with cytokine mRNA
mixtures on days 13, 15, 17, 19, 21, 23 and individual tumor growth
was plotted. FIG. 6A is a duplicate in the same experiment as
described in FIG. 7A, showing GM-CSF, IL-2, IL-12sc, IFN.alpha.
(ModB). FIG. 6B is a duplicate in the same experiment as described
in FIG. 7C, showing luciferase mRNA (ModB). N=8 mice/group.
[0557] FIGS. 6C and 6D show results of experiments where B16F10
tumor bearing mice were injected intratumorally with mRNA on days
11, 13, 15, 17 and individual tumor growth was plotted. FIG. 6C is
a duplicate in the same experiment as described in FIG. 5C, showing
GM-CSF, IL-2, IL-12sc, IFN.alpha. (ModB). FIG. 6D is a duplicate in
the same experiment as described in FIGS. 4F and 5D, showing
luciferase mRNA (ModB). N=8 mice/group.
[0558] FIGS. 6E and 6F show results of experiments where MC38 tumor
bearing mice were injected intratumorally with cytokine mRNA
mixtures on days 11, 15, 19, 23 and individual tumor growth was
plotted. FIG. 6E shows GM-CSF, IL-2, IL-12sc, IFN.alpha. (ModB).
FIG. 6F shows luciferase mRNA (ModB). N=5 mice/group.
[0559] FIGS. 7A-7F show results of experiments where CT26 tumor
bearing mice were injected intratumorally with cytokine mRNA
mixtures on days 13, 15, 17, 19, 21, 23 and individual tumor growth
was plotted. FIG. 7A is a duplicate in the same experiment as
described in FIG. 6A, showing IL-2, IL-12sc, GM-CSF, IFN.alpha.
(ModB). FIG. 7B shows IL-15 sushi, IL-12sc, GM-CSF, IFN.alpha.
(ModB). FIG. 7C is a duplicate in the same experiment as described
in FIG. 6B, showing a luciferase mRNA (ModB) control. In a repeat
study of similar design, CT26 tumor bearing mice were injected
intratumorally with cytokine mRNA mixtures on days 19, 21, 23, 26,
28 and 30 and individual tumor growth was plotted. FIG. 7D is a
duplicate of the same experiment as described in FIG. 9A, showing
IL-2, IL-12sc, GM-CSF, IFN.alpha. (ModB). FIG. 7E shows IL-15
sushi, IL-12sc, GM-CSF, IFN.alpha. (ModB). FIG. 7F is a duplicate
of the same experiment as described in FIG. 9F, showing a
luciferase mRNA (ModB) control. N=8 mice/group for Figures A-C and
N=10-11 mice/group for Figures D-F.
[0560] FIGS. 8A-8H show results of experiments where CT26 tumor
bearing mice were injected intratumorally with mRNA on days 12, 15,
19 and 22 and individual tumor growth was monitored and plotted to
day 35. FIG. 8A shows IL-15 sushi, IL-12sc, GM-CSF, IFN.alpha.
(ModB). FIG. 8B shows IL-15 sushi, IL-12sc, IFN.alpha. (ModB). FIG.
8C shows IL-15 sushi, GM-CSF, IFN.alpha. (ModB). FIG. 8D shows
GM-CSF, IL-12sc, IFN.alpha. (ModB). FIG. 8E shows IL-15 sushi,
GM-CSF, IL-12sc (ModB). FIG. 8F shows a luciferase mRNA (ModB)
control. (N=10/group). FIGS. 8G and 8H show tumor growth kinetics
of the study shown in FIGS. 8A-8F. FIG. 8G shows mean tumor volumes
up to day 33 for all treatment groups. FIG. 8H shows tumor growth
repression. T/C (Tumor/Control based on mean tumor volume) was
calculated up to day 19.
[0561] FIGS. 9A-9F show experiments where CT26 tumor bearing mice
were injected intratumorally with mRNA on days 19, 21, 23, 26, 28
and 30 and tumor growth was monitored to day 50. FIG. 9A is a
duplicate in the same experiment as described in FIG. 7D, showing
GM-CSF, IL-2, IL-12sc, IFN.alpha. (ModB). FIG. 9B shows IL-2,
IL-12sc, IFN.alpha. (ModB). FIG. 9C shows GM-CSF, IL-2, IFN.alpha.
(ModB). FIG. 9D shows GM-CSF, IL-12sc, IFN.alpha. (ModB). FIG. 9E
shows GM-CSF, IL-2, IL-12sc (ModB). FIG. 9F is a duplicate in the
same experiment as described in FIG. 7F, showing shows luciferase
mRNA (ModA) as control. (N=11/group for FIG. 9A-E; luciferase mRNA
group N=10 for FIG. 9F).
[0562] FIGS. 10A-10B shows tumor growth kinetics of the study shown
in FIG. 9. FIG. 10A shows mean tumor volumes up to day 36 for all
treatment groups. FIG. 10B shows tumor growth repression. T/C
(Tumor/Control based on mean tumor volume) was calculated up to day
30.
[0563] FIG. 11 shows a bar graph of data from the experiments shown
in FIG. 9 showing mRNA mixtures with significant reduction in tumor
volume, where the number of mice in each of the treatment groups
with significant tumor reduction was compared to the luciferase
control group based on Z score of tumor volume and the ratio
between tumor volume change and the mean of the control group.
[0564] FIGS. 12A-12D show the results of experiments where mice
that were 1) tumor naive, or 2) had been previously injected
subcutaneously with 5.times.10.sup.5B16F10 cells and rejected the
original tumor following intratumoral cytokine mRNA treatment. Both
groups were re-challenged with B16F10 tumors. FIG. 12A shows tumor
naive host mice. FIG. 12B shows mice that had previously rejected
B16F10 tumors following intratumoral cytokine mRNA treatment with
GM-CSF, IL-15sushi, IL-12sc, IFN.alpha. (ModB). Mice were monitored
for 55 days following B16F10 injection and tumor growth for each
mouse was plotted. All nine naive mice engrafted with B16F10 cells
developed tumors (FIG. 12A), whereas all eight tumor-free mice
rejected the B16F10 cells and did not exhibit growth of B16F10
tumors (FIG. 12B). The graph in FIG. 12B has no visible data trace
because all observations were zero, i.e., overlapping the
horizontal axis. FIG. 12C shows an example of localized vitiligo at
the tumor site. FIG. 12D shows the results of experiments where
mice that were tumor naive (triangle symbol), or had been
previously injected subcutaneously with CT26 tumor cells and
rejected the original tumor following intratumoral cytokine mRNA
treatment (circle symbol). Both groups were re-challenged with
either CT26 tumor cells (CT26-WT) or with CT26-.DELTA.gp70 tumor
cells, in which the gp70-epitope had been knocked out. Mice were
monitored for 21 days following tumor cell injection. All nine but
one naive mice engrafted with CT26-WT cells and all naive mice
engrafted with CT26-.DELTA.gp70 cells developed tumors, whereas all
three tumor-free mice rejected the CT26 tumor cells and did not
exhibit growth of CT26 and CT26-.DELTA.gp70 tumors,
respectively.
[0565] FIGS. 13A-13D show the results of experiments where mice
were implanted with B16F10 tumor cells on day 0 on the right
(injected) and left flanks (uninjected) (FIG. 13A). Mice received a
series of 4 intratumoral injections with ModB cytokine mRNA (IL-15
sushi, IL-12sc, GM-CSF and IFN.alpha.) or ModB control mRNA
(luciferase) in the right tumor on days 11, 15, 19, and 23. Mean
tumor volumes+/-SEM (n=12) are shown for the injected (FIG. 13B)
and the contralateral uninjected tumors (FIG. 13C). Median survival
is shown in FIG. 13D.
[0566] FIGS. 14A-14F show results of experiments where human HEK293
(FIG. 14B) and melanoma cell lines (A101D (FIG. 14C), A2058 (FIG.
14D), A375 (FIG. 14E), and Hs294T (FIG. 14F)) were transfected with
human cytokine mRNA mixture (IL-12sc, GM-CSF, IL-15 sushi and
IFN.alpha.2b) in a range of mRNA doses. Supernatants were collected
24 hrs after transfection and protein concentrations were
determined with cytokine specific ELISAs. FIG. 14A shows a
schematic of the experiment.
[0567] FIGS. 15A-15B show a schematic (FIG. 15A) and results (FIG.
15B) from a study where a human cytokine mRNA mixture encoding
IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.2b, or individual
cytokine mRNAs, were transfected in HEK293 cells and the
conditioned media was collected at 24 hrs, diluted and added to
human PBMCs. IFN.gamma. was measured in the PBMC culture
supernatant at 24 hrs. (N=6 donors, Mean).
[0568] FIGS. 16A-16E show the results of experiments where immune
compromised mice bearing human A375 tumor xenografts received a
single injection with the ModB mRNA mixture encoding the human
cytokines (IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.2b; "the IL15
sushi mixture") or (IL-2, IL-12sc, GM-CSF and IFN.alpha.2b; "the
IL2 mixture"). Tumor cell lysates were prepared at 2 hrs, 4 hrs, 8
hrs, 24 hrs, 48 hrs, and 72 hrs after injection and the
concentration of each cytokine was measured with respect to the
total protein in the tumor lysates (n=3 mice/time point, +/-SEM).
FIG. 16A shows IFN.alpha.2b, FIG. 16B shows IL-2, FIG. 16C shows
IL-12sc, FIG. 16D shows IL-15 sushi, and FIG. 16E shows GM-CSF.
[0569] FIGS. 17A-17C show the results of experiments where mRNA was
isolated from A375 tumors at 2 hrs, 4 hrs, 8 hrs, 24 hrs, 48 hrs,
and 72 hrs after injection of ModB cytokine mRNA mixture (IL-15
sushi, IL-12sc, GM-CSF, IFN.alpha.2b) or (IL-2, IL-12sc, GM-CSF,
IFN.alpha.2b). Expression of interferon alpha response genes were
monitored by qPCR. FIG. 17A shows human ISG15, FIG. 17B shows human
ISG54, and FIG. 17C shows human MX1.
[0570] FIGS. 18A-18E show the results of experiments where mice
were implanted with B16F10 tumor cells and treated with mRNA
mixtures (FLT3L, IL-2, 41BBL, and CD27L-CD40L) with or without
IFN.alpha.. mRNA mixtures without IFN.alpha. in standard (ModA,
FIG. 18B) and modified forms (ModB, FIG. 18C) were compared to
those including IFN.alpha. in standard (ModA, FIG. 18D) and
modified forms (ModB, FIG. 18E). FIG. 18A is a negative control
where Ringer's media without mRNA was provided.
[0571] FIGS. 19A-19E show the results of experiments where mice
were implanted with tumors on one flank and received an IV
injection of luciferase-expressing tumor cells that homed to the
lung (FIG. 19A). Mice in the treatment group received intratumoral
injections of mRNA mixtures IL-15 sushi, IL-12sc, GM-CSF and
IFN.alpha. into the flank tumor only while tumors in the lung were
untreated. FIG. 19B shows exemplarily bioluminescence measurements
in lungs and pictures of the according lungs taken out on the same
day (day 20); tumor nodes are visual as black marks; FIG. 19C shows
mean tumor volume of flank tumors as determined by caliper
measurements; FIG. 19D shows total flux analysis of bioluminescence
measurements on day 20; FIG. 19E shows lung weights.
[0572] FIGS. 20A-20G show the results of experiments designed to
assess the effect of intratumoral injection of mRNA mixtures in
combination with systemic administration of antibodies in dual
flank tumor models. Mice implanted with either the B16F10 tumor on
the left and right flank or MC38 tumors on the left and right flank
received intratumoral injections with an mRNA mixture of IL-15
sushi, IL-12sc, GM-CSF and IFN.alpha. (Mod B) into only one flank
tumor, while the other flank tumor was untreated. Mice also
received intraperitoneal (systemic) injection of an anti-PD1
antibody. FIG. 20 shows overall survival in the B16F10 (FIG. 20A)
and MC38 (FIG. 20B) tumor models. FIGS. 20C-G show the results of
an experiment evaluating the anti-PD-1 antibody where mice were
implanted with B16F10 tumors on one flank and received an IV
injection of luciferase-expressing B16F10 tumor cells that homed to
the lung. Mice received three intratumoral injections with an mRNA
mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. and also
received three intraperitoneal (systemic) injection of an anti-PD-1
antibody. Tumor growth of the SC tumors is depicted in FIG. 20C-F.
FIG. 20C shows control mRNA and control antibody; FIG. 20D shows
control mRNA plus anti-PD1 antibody; FIG. 20E shows cytokine mRNA
mixture plus isotype control antibody. FIG. 20F shows cytokine mRNA
plus anti-PD-1 antibody. FIG. 20G shows percent survival of all
four treatment groups until day 70 after IV tumor inoculation; the
treatment group that received mRNA plus anti-PD-1 antibody showed
strongest anti-tumoral activity with 6 out of 15 mice being
tumor-free on day 40 after tumor inoculation.
[0573] FIGS. 21A-21I show the results of additional experiments
designed to assess the effect of intratumoral injection of mRNA
mixtures in combination with systemic administration of antibodies.
Mice bearing CT26 tumors received intratumoral injections with an
mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.. Mice
also received intraperitoneal (systemic) injection of an
anti-CTLA-4 antibody. FIG. 21A shows that the combination therapy
of intratumoral cytokine mRNA and IP-injected anti-CTLA-4 resulted
in strongest anti-tumoral activity with 12 out of 16 mice being
tumor-free on day 55 after tumor inoculation. FIG. 21B shows
cytokine mRNA mixture plus isotype control antibody; FIG. 21C shows
control mRNA plus anti-CTLA-4 antibody; FIG. 21D shows control mRNA
and control antibody. FIGS. 21E-21I show the results of additional
experiments designed to assess the effect of intratumoral injection
of mRNA mixtures in combination with anti-CTLA-4 antibody in B16F10
tumor model. Mice bearing B16F10 tumors received intratumoral
injections with an mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF and
IFN.alpha.. Mice also received intraperitoneal (systemic) injection
of an anti-CTLA-4 antibody. FIG. 21E shows that the combination
therapy of intratumoral cytokine mRNA and IP-injected anti-CTLA-4
resulted in strongest anti-tumoral activity with 6 out of 9 mice
being tumor-free on day 70 after tumor inoculation. FIG. 21F shows
cytokine mRNA mixture plus isotype control antibody; FIG. 21G shows
control mRNA plus anti-CTLA-4 antibody; FIG. 21H shows control mRNA
and control antibody. FIG. 21I shows percent survival of all four
treatment groups until day 70 after tumor inoculation.
[0574] FIGS. 22A-22D shows the results of experiments designed to
evaluate the effect of intratumoral injection of cytokine mRNA (Mod
B) in human tumor xenografts of different human cancers.
Intratumoral expression of each of the 4 mRNA encoded cytokines is
shown: IL-12sc (FIG. 22A), IFN.alpha.2b (FIG. 22B), GM-CSF (FIG.
22C), and IL-15 sushi (FIG. 22D).
[0575] FIGS. 23A-23D show the results of experiments designed to
evaluate the effect of different intratumoral mRNA doses on the
expression of the encoded cytokines: IL-15 sushi (FIG. 23A),
IL-12sc (FIG. 23B), GM-CSF (FIG. 23C) and IFN.alpha.2b (FIG.
23D).
[0576] FIGS. 24A-24G show the results of experiments where mice
were implanted with B16F10 tumor, and treated with four
intratumoral injections of cytokine mRNA mixture of IL-15 sushi,
IL-12sc, GM-CSF, IFN.alpha. (ModB) or mRNA encoding a single
cytokine. Tumor volume out to approximately day 70 was measured.
FIG. 24A shows luciferase control; FIG. 24B shows the four-cytokine
mixture; FIG. 24C shows IL-12sc mRNA only; FIG. 24D shows GM-CSF
mRNA only; FIG. 24E shows IFN.alpha. mRNA only; and FIG. 24F shows
IL-15 sushi only. FIG. 24G shows overall survival of B16F10 tumors
treated with cytokine mRNA mixture or individual mRNA encoded
cytokines. Survival data is from experiment presented in FIG.
24A-F.
[0577] FIG. 25 shows CD8+ immune cell infiltrate in subcutaneous
tumors after control mRNA ("placebo") and cytokine mRNA
treatment.
[0578] FIGS. 26A-26C show results of measurements of CD8+ T cells
specific for the gp70 tumor antigen of gp70 in blood of CT26 tumor
bearing mice that had received intratumoral administration of
cytokine mRNA treatment and control mRNA, respectively. FIG. 26C
shows exemplarily a FACS histogram of CD8+ T cells stained with
anti-mouse CD8 antibody and with the gp70-specific tetramer derived
from an animal that had received control mRNA and FIG. 26B shows
the example from one animal treated with cytokine mRNA. FIG. 26C
shows the analysis of percentage of gp70-specific CD8+ T-cells in
blood 13 days after treatment start from 9 mice that had received
four injections of control mRNA and 10 mice that had received 4
injections of cytokine mRNA.
[0579] FIGS. 27A-27C show experiments where mice bearing B16F10
tumors on the left and right flanks received a single intratumoral
mRNA injection with cytokine mRNA or control mRNA in only one
tumor. On day 7 following the mRNA injection the left and right
tumors were collected and subjected to RNA sequencing. FIG. 27B
shows the results of ingenuity pathway analysis comparing the gene
expression changes between the cytokine mRNA treatment vs control
mRNA treated tumors. Causal network analysis for treated tumor side
(Column 1) and untreated tumor side (Column 2) was performed and
Activation Z score (Top half) and Inhibition Z score (Lower half)
was analyzed to define pathways up and down regulated,
respectively. FIG. 27 shows cluster analysis of injected and
non-injected tumors was performed based on 327 interferon gamma
regulated genes. Both the injected and non-injected tumors of mice
treated with cytokine mRNA showed upregulation of multiple IFN
gamma genes in comparison to mice treated with control mRNA.
[0580] FIGS. 28A-28D show fluorescence micrographs of cells from a
B16F10 dualtumor model. Panel A shows the injected tumor treated
with cytokine mRNA and panel B shows the corresponding uninjected
tumor. Panel C shows the injected tumor treated with control mRNA
and panel D shows the corresponding uninjected tumor. The slides
were stained for CD4+, CD8+, and FoxP3+ cells.
[0581] FIGS. 28E-G show frequency of CD4+, CD8+ and FOXP3+ cells
quantified in the immunofluorescent images. The frequency of CD4+
and CD8+ cells/mm.sup.2 is presented in FIGS. 28E and 28F. The
ratio of the CD8+ frequency divided by FOXP3+ frequency is
presented in FIG. 28G.
[0582] FIGS. 29A-29G show mice with a single B16F10 tumor received
a single injection with either mRNA encoding the Thy1.1 cell
surface protein or vehicle alone (Ringer's solution). At
approximately 16-18 hours following intratumoral injection the
tumor was excised, digested, stained with a panel of antibodies and
analyzed by flow cytometry. The cell type and frequency of cells
expressing Thy1.1 were characterized.
[0583] FIGS. 30A-30F show expression of the indicated proteins
following various doses of cytokine mRNA or luciferase control mRNA
detected in tumor lysates as described in Example 15. "IFNy" in
FIG. 30E indicates IFN.gamma..
[0584] FIGS. 31A-31B show flow cytometry results for CD8+ and
FOXP3+(Treg) cells following control or cytokine mRNA treatments as
described in Example 15. The observed ratio of CD8+ to Treg cells
is shown in each panel.
[0585] FIGS. 31C-31D show flow cytometry results for polyfunctional
CD8+ T cells following control or cytokine mRNA treatments as
described in Example 15. The proportion of polyfunctional CD8+ T
cells is shown in each panel.
[0586] FIG. 31E shows the level of PD-L1 on infiltrating myeloid
cells following control or cytokine mRNA treatments as described in
Example 15.
[0587] FIG. 31F shows the level of PD-1 on infiltrating CD8+ cells
following control or cytokine mRNA treatments as described in
Example 15.
[0588] FIGS. 31G-H show the frequency of intratumoral Granzyme B
CD8+ T cells following control or cytokine mRNA treatments as
described in Example 15.
[0589] FIGS. 32A-32B show luciferase expression in various tissues
following intratumoral injection of 50 .mu.g mRNA encoding firefly
luciferase as described in Example 16.
[0590] FIG. 33 shows data relating to an experiment essentially as
shown in FIG. 12.
[0591] FIG. 34 shows the effect of depleting CD8+ T cells, CD4+ T
cells or NK cells before treatment with cytokine mRNAs on survival
in mice bearing B16F10 tumors as described in Example 17.
[0592] FIG. 35 shows survival of WT and IFN.gamma. KO mice
implanted with B16F10 tumor cells as described in Example 1 and
treated with control or cytokine mRNAs as described in Example
18.
[0593] FIG. 36 shows a "peri-tumorally," or "peri-tumoral," area
that is about 2-mm wide and is adjacent to the invasive front of
the tumor periphery. The peri-tumoral area comprises host
tissue.
DESCRIPTION OF THE SEQUENCES
[0594] Tables 1 and 2 provide a listing of certain sequences
referenced herein.
TABLE-US-00001 TABLE 1 DESCRIPTION OF THE SEQUENCES (human
sequences) SEQ ID NO: Description SEQUENCE 5' UTR 1 ModA 5' UTR
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACC (DNA) 2 ModA
5' UTR GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACC (RNA) 3
ModB 5' UTR
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA (DNA)
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCC 4 ModB 5'
UTR
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCC 5
Alternative AGACGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACC
Mod 5' UTR (DNA) 6 Alternative
AGACGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACC Mod 5' UTR
(RNA) 3' UTR 7 ModA/B 3'
CTCGAGCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGTACCCCGAGTCTCCCCCGAC-
CTCGGGTCCCAGGTA UTR (DNA)
TGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCCAAGCACGC-
AGCAATGCAGCTCAAAACGCTTAGC
CTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACT-
AACCCCAGGGTTGGTC
AATTTCGTGCCAGCCACACCGAGACCTGGTCCAGAGTCGCTAGCCGCGTCGCTAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAGCATA
TGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAA 8 ModA/B 3'
CUCGAGCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGGGUACCCCGAGUCUCCCCCGAC-
CUCGGGUCCCAGGUA UTR (RNA)
UGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCUCCCAAGCACGC-
AGCAAUGCAGCUCAAAACGCUUAGC
CUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACU-
AACCCCAGGGUUGGUC
AAUUUCGUGCCAGCCACACCGAGACCUGGUCCAGAGUCGCUAGCCGCGUCGCUAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAGCAUA
UGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAA IL-2 9 Human IL-2
MYRMQLLSCIALSLALVTNSAPTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFYMPKKATEL-
KHLQCLEEELKPLEE (amino
VLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFCQSIISTLT
acid) 10 Human non-
ATGTACAGGATGCAACTCCTGTCTTGCATTGCACTAAGTCTTGCACTTGTCACAAACAGTGCACCTACTTCAA-
GTTCTACAAAGAAAA optimized
CACAGCTACAACTGGAGCATTTACTGCTGGATTTACAGATGATTTTGAATGGAATTAATAATT-
ACAAGAATCCCAAACTCACCAGGAT IL-2 (CDS
GCTCACATTTAAGTTTTACATGCCCAAGAAGGCCACAGAACTGAAACATCTTCAGTGTCTAGA-
AGAAGAACTCAAACCTCTGGAGGAA DNA)
GTGCTAAATTTAGCTCAAAGCAAAAACTTTCACTTAAGACCCAGGGACTTAATCAGCAATATCAACGT-
AATAGTTCTGGAACTAAAGG
GATCTGAAACAACATTCATGTGTGAATATGCTGATGAGACAGCAACCATTGTAGAATTTCTGAACAGATGGA-
TTACCTTTTGTCAAAG CATCATCTCAACACTGACTTGATGA 11 Human
ATGTACAGAATGCAGCTGCTGTCTTGCATTGCTCTTTCTCTTGCTCTTGTGACAAATTCTGCTCC-
AACATCTTCTTCAACAAAGAAAA optimized
CACAGCTTCAGCTTGAACACCTTCTTCTTGATCTTCAGATGATTCTGAATGGAATCAACAATT-
ACAAAAATCCAAAACTGACAAGAAT IL-2 (CDS
GCTGACATTTAAATTTTACATGCCAAAGAAAGCAACAGAACTGAAACACCTTCAGTGCCTTGA-
AGAAGAACTGAAACCTCTGGAAGAA DNA)
GTGCTGAATCTGGCTCAGAGCAAAAATTTTCACCTGAGACCAAGAGATCTGATCAGCAACATCAATGT-
GATTGTGCTGGAACTGAAAG
GATCTGAAACAACATTCATGTGTGAATATGCTGATGAAACAGCAACAATTGTGGAATTTCTGAACAGATGGA-
TCACATTTTGCCAGTC AATCATTTCAACACTGACATGATGA 12 Human non-
AUGUACAGGAUGCAACUCCUGUCUUGCAUUGCACUAAGUCUUGCACUUGUCACAAACAGUGCACCUACUUCAA-
GUUCUACAAAGAAAA optimized
CACAGCUACAACUGGAGCAUUUACUGCUGGAUUUACAGAUGAUUUUGAAUGGAAUUAAUAAUU-
ACAAGAAUCCCAAACUCACCAGGAU IL-2 (RNA
GCUCACAUUUAAGUUUUACAUGCCCAAGAAGGCCACAGAACUGAAACAUCUUCAGUGUCUAGA-
AGAAGAACUCAAACCUCUGGAGGAA encoding
GUGCUAAAUUUAGCUCAAAGCAAAAACUUUCACUUAAGACCCAGGGACUUAAUCAGCAAUAUCA-
ACGUAAUAGUUCUGGAACUAAAGG CDS)
GAUCUGAAACAACAUUCAUGUGUGAAUAUGCUGAUGAGACAGCAACCAUUGUAGAAUUUCUGAACAGA-
UGGAUUACCUUUUGUCAAAG CAUCAUCUCAACACUGACUUGAUGA 13 Human
AUGUACAGAAUGCAGCUGCUGUCUUGCAUUGCUCUUUCUCUUGCUCUUGUGACAAAUUCUGCUCC-
AACAUCUUCUUCAACAAAGAAAA optimized
CACAGCUUCAGCUUGAACACCUUCUUCUUGAUCUUCAGAUGAUUCUGAAUGGAAUCAACAAUU-
ACAAAAAUCCAAAACUGACAAGAAU IL-2 (RNA
GCUGACAUUUAAAUUUUACAUGCCAAAGAAAGCAACAGAACUGAAACACCUUCAGUGCCUUGA-
AGAAGAACUGAAACCUCUGGAAGAA encoding
GUGCUGAAUCUGGCUCAGAGCAAAAAUUUUCACCUGAGACCAAGAGAUCUGAUCAGCAACAUCA-
AUGUGAUUGUGCUGGAACUGAAAG CDS)
GAUCUGAAACAACAUUCAUGUGUGAAUAUGCUGAUGAAACAGCAACAAUUGUGGAAUUUCUGAACAGA-
UGGAUCACAUUUUGCCAGUC AAUCAUUUCAACACUGACAUGAUGA IL-12sc 14 Human IL-
MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITWTLDQSSEVLGSGK-
TLTIQVKEFGDAGQY 12sc (amino
TCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRG-
SSDPQGVTCGAATLS acid)
AERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKNLQL-
KPLKNSRQVEVSWEYPDTWST
PHSYFSLTFCVQVQGKSKREKKDRVETDKTSATVICRKNASISVRAQDRYYSSSWSEWASVPCSGSSGGGGS-
PGGGSSRNLPVATPDP
GMFPCLHHSQNLLRAVSNMLQKARQTLEFYPCTSEEIDHEDITKDKTSTVEACLPLELTKNESCLNSRETSF-
ITNGSCLASRKTSFMM
ALCLSSIYEDLKMYQVEFKTMNAKLLMDPKRQIFLDQNMLAVIDELMQALNFNSETVPQKSSLEEPDFYKTK-
IKLCILLHAFRIRAVT IDRVMSYLNAS 15 Human non-
ATGTGTCACCAGCAGTTGGTCATCTCTTGGTTTTCCCTGGTTTTTCTGGCATCTCCCCTCGTGGCCATATGGG-
AACTGAAGAAAGATG optimized
TTTATGTCGTAGAATTGGATTGGTATCCGGATGCCCCTGGAGAAATGGTGGTCCTCACCTGTG-
ACACCCCTGAAGAAGATGGTATCAC IL-12sc
CTGGACCTTGGACCAGAGCAGTGAGGTCTTAGGCTCTGGCAAAACCCTGACCATCCAAGTCAAAG-
AGTTTGGAGATGCTGGCCAGTAC (CDS DNA)
ACCTGTCACAAAGGAGGCGAGGTTCTAAGCCATTCGCTCCTGCTGCTTCACAAAAAGGAAGAT-
GGAATTTGGTCCACTGATATTTTAA Sequence
AGGACCAGAAAGAACCCAAAAATAAGACCTTTCTAAGATGCGAGGCCAAGAATTATTCTGGACG-
TTTCACCTGCTGGTGGCTGACGAC annotation
AATCAGTACTGATTTGACATTCAGTGTCAAAAGCAGCAGAGGGTCTTCTGACCCCCAAGGGGTGACGTGCGGA-
GCTGCTACACTCTCT CAPS: p40
GCAGAGAGAGTCAGAGGGGACAACAAGGAGTATGAGTACTCAGTGGAGTGCCAGGAGGACAGT-
GCCTGCCCAGCTGCTGAGGAGAGTC domain;
TGCCCATTGAGGTCATGGTGGATGCCGTTCACAAGCTCAAGTATGAAAACTACACCAGCAGCTTC-
TTCATCAGGGACATCATCAAACC CAPS:
TGACCCACCCAAGAACTTGCAGCTGAAGCCATTAAAGAATTCTCGGCAGGTGGAGGTCAGCTGGGAG-
TACCCTGACACCTGGAGTACT linker;
CCACATTCCTACTTCTCCCTGACATTCTGCGTTCAGGTCCAGGGCAAGAGCAAGAGAGAAAAGAA-
AGATAGAGTCTTCACGGACAAGA CAPS: p35.
CCTCAGCCACGGTCATCTGCCGCAAAAATGCCAGCATTAGCGTGCGGGCCCAGGACCGCTACTATAGCTCATC-
TTGGAGCGAATGGGC
ATCTGTGCCCTGCAGTGGCTCTAGCGGAGGGGGAGGCTCTCCTGGCGGGGGATCTAGCAGAAACCTCCCCGT-
GGCCACTCCAGACCCA
GGAATGTTCCCATGCCTTCACCACTCCCAAAACCTGCTGAGGGCCGTCAGCAACATGCTCCAGAAGGCCAGA-
CAAACTCTAGAATTTT
ACCCTTGCACTTCTGAGGAAATTGATCATGAAGATATCACAAAAGATAAAACCAGCACAGTGGAGGCCTGTT-
TACCATTGGAATTAAC
CAAGAATGAGAGTTGCCTAAATTCCAGAGAGACCTCTTTCATAACTAATGGGAGTTGCCTGGCCTCCAGAAA-
GACCTCTTTTATGATG
GCCCTGTGCCTTAGTAGTATTTATGAAGACTTGAAGATGTACCAGGTGGAGTTCAAGACCATGAATGCAAAG-
CTTCTGATGGATCCTA
AGAGGCAGATCTTTCTAGATCAAAACATGCTGGCAGTTATTGATGAGCTGATGCAGGCCCTGAATTTCAACA-
GTGAGACTGTGCCACA
AAAATCCTCCCTTGAAGAACCGGATTTTTATAAAACTAAAATCAAGCTCTGCATACTTCTTCATGCTTTCAG-
AATTCGGGCAGTGACT ATTGATAGAGTGATGAGCTATCTGAATGCTTCCTGATGA 16 Human
ATGTGTCACCAGCAGCTGGTGATCTCATGGTTCTCCCTGGTATTTCTGGCATCTCCTCTTGTCGC-
AATCTGGGAACTGAAGAAAGACG optimized
TGTATGTCGTTGAGCTCGACTGGTATCCGGATGCGCCTGGCGAGATGGTGGTGCTGACCTGTG-
ACACCCCAGAGGAGGATGGGATCAC IL-12sc
TTGGACCCTTGATCAATCCTCCGAAGTGCTCGGGTCTGGCAAGACTCTGACCATACAAGTGAAAG-
AGTTTGGCGATGCCGGGCAGTAC (CDS DNA)
ACTTGCCATAAGGGCGGAGAAGTTCTGTCCCACTCACTGCTGCTGCTGCACAAGAAAGAGGAC-
GGAATTTGGAGTACCGATATCCTGA Sequence
AAGATCAGAAAGAGCCCAAGAACAAAACCTTCTTGCGGTGCGAAGCCAAGAACTACTCAGGGAG-
ATTTACTTGTTGGTGGCTGACGAC annotation
GATCAGCACCGATCTGACTTTCTCCGTGAAATCAAGTAGGGGATCATCTGACCCTCAAGGAGTCACATGTGGA-
GCGGCTACTCTGAGC CAPS: p40
GCTGAACGCGTAAGAGGGGACAATAAGGAGTACGAGTATAGCGTTGAGTGCCAAGAGGATAGC-
GCATGCCCCGCCGCCGAAGAATCAT domain;
TGCCCATTGAAGTGATGGTGGATGCTGTACACAAGCTGAAGTATGAGAACTACACAAGCTCCTTC-
TTCATCCGTGACATCATCAAACC CAPS:
AGATCCTCCTAAGAACCTCCAGCTTAAACCTCTGAAGAACTCTAGACAGGTGGAAGTGTCTTGGGAG-
TATCCCGACACCTGGTCTACA linker;
CCACATTCCTACTTCAGTCTCACATTCTGCGTTCAGGTACAGGGCAAGTCCAAAAGGGAGAAGAA-
GGATCGGGTCTTTACAGATAAAA CAPS: p35.
CAAGTGCCACCGTTATATGCCGGAAGAATGCCTCTATTTCTGTGCGTGCGCAGGACAGATACTATAGCAGCTC-
TTGGAGTGAATGGGC
CAGTGTCCCATGTTCAGGGTCATCCGGTGGTGGCGGCAGCCCCGGAGGCGGTAGCTCCAGAAATCTCCCTGT-
GGCTACACCTGATCCA
GGCATGTTTCCCTGTTTGCACCATAGCCAAAACCTCCTGAGAGCAGTCAGCAACATGCTCCAGAAAGCTAGA-
CAAACACTGGAATTCT
ACCCATGCACCTCCGAGGAAATAGATCACGAGGATATCACTAAGGACAAAACAAGCACTGTCGAAGCATGCC-
TTCCCTTGGAACTGAC
AAAGAACGAGAGTTGCCTTAATTCAAGAGAAACATCTTTCATTACAAACGGTAGCTGCTTGGCAAGCAGAAA-
AACATCTTTTATGATG
GCCCTTTGTCTGAGCAGTATTTATGAGGATCTCAAAATGTACCAGGTGGAGTTTAAGACCATGAATGCCAAG-
CTGCTGATGGACCCAA
AGAGACAGATTTTCCTCGATCAGAATATGCTGGCTGTGATTGATGAACTGATGCAGGCCTTGAATTTCAACA-
GCGAAACCGTTCCCCA
GAAAAGCAGTCTTGAAGAACCTGACTTTTATAAGACCAAGATCAAACTGTGTATTCTCCTGCATGCCTTTAG-
AATCAGAGCAGTCACT ATAGATAGAGTGATGTCCTACCTGAATGCTTCCTGATGA 17 Human
non-
AUGUGUCACCAGCAGUUGGUCAUCUCUUGGUUUUCCCUGGUUUUUCUGGCAUCUCCCCUCGUGGCCAUAUGGG-
AACUGAAGAAAGAUG optimized
UUUAUGUCGUAGAAUUGGAUUGGUAUCCGGAUGCCCCUGGAGAAAUGGUGGUCCUCACCUGUG-
ACACCCCUGAAGAAGAUGGUAUCAC IL-12sc
CUGGACCUUGGACCAGAGCAGUGAGGUCUUAGGCUCUGGCAAAACCCUGACCAUCCAAGUCAAAG-
AGUUUGGAGAUGCUGGCCAGUAC (RNA
ACCUGUCACAAAGGAGGCGAGGUUCUAAGCCAUUCGCUCCUGCUGCUUCACAAAAAGGAAGAUGGAAU-
UUGGUCCACUGAUAUUUUAA encoding
AGGACCAGAAAGAACCCAAAAAUAAGACCUUUCUAAGAUGCGAGGCCAAGAAUUAUUCUGGACG-
UUUCACCUGCUGGUGGCUGACGAC CDS)
AAUCAGUACUGAUUUGACAUUCAGUGUCAAAAGCAGCAGAGGGUCUUCUGACCCCCAAGGGGUGACGU-
GCGGAGCUGCUACACUCUCU
GCAGAGAGAGUCAGAGGGGACAACAAGGAGUAUGAGUACUCAGUGGAGUGCCAGGAGGACAGUGCCUGCCCA-
GCUGCUGAGGAGAGUC
UGCCCAUUGAGGUCAUGGUGGAUGCCGUUCACAAGCUCAAGUAUGAAAACUACACCAGCAGCUUCUUCAUCA-
GGGACAUCAUCAAACC
UGACCCACCCAAGAACUUGCAGCUGAAGCCAUUAAAGAAUUCUCGGCAGGUGGAGGUCAGCUGGGAGUACCC-
UGACACCUGGAGUACU
CCACAUUCCUACUUCUCCCUGACAUUCUGCGUUCAGGUCCAGGGCAAGAGCAAGAGAGAAAAGAAAGAUAGA-
GUCUUCACGGACAAGA
CCUCAGCCACGGUCAUCUGCCGCAAAAAUGCCAGCAUUAGCGUGCGGGCCCAGGACCGCUACUAUAGCUCAU-
CUUGGAGCGAAUGGGC
AUCUGUGCCCUGCAGUGGCUCUAGCGGAGGGGGAGGCUCUCCUGGCGGGGGAUCUAGCAGAAACCUCCCCGU-
GGCCACUCCAGACCCA
GGAAUGUUCCCAUGCCUUCACCACUCCCAAAACCUGCUGAGGGCCGUCAGCAACAUGCUCCAGAAGGCCAGA-
CAAACUCUAGAAUUUU
ACCCUUGCACUUCUGAGGAAAUUGAUCAUGAAGAUAUCACAAAAGAUAAAACCAGCACAGUGGAGGCCUGUU-
UACCAUUGGAAUUAAC
CAAGAAUGAGAGUUGCCUAAAUUCCAGAGAGACCUCUUUCAUAACUAAUGGGAGUUGCCUGGCCUCCAGAAA-
GACCUCUUUUAUGAUG
GCCCUGUGCCUUAGUAGUAUUUAUGAAGACUUGAAGAUGUACCAGGUGGAGUUCAAGACCAUGAAUGCAAAG-
CUUCUGAUGGAUCCUA
AGAGGCAGAUCUUUCUAGAUCAAAACAUGCUGGCAGUUAUUGAUGAGCUGAUGCAGGCCCUGAAUUUCAACA-
GUGAGACUGUGCCACA
AAAAUCCUCCCUUGAAGAACCGGAUUUUUAUAAAACUAAAAUCAAGCUCUGCAUACUUCUUCAUGCUUUCAG-
AAUUCGGGCAGUGACU AUUGAUAGAGUGAUGAGCUAUCUGAAUGCUUCCUGAUGA
18 Human
AUGUGUCACCAGCAGCUGGUGAUCUCAUGGUUCUCCCUGGUAUUUCUGGCAUCUCCUCUUGUCGC-
AAUCUGGGAACUGAAGAAAGACG Optimized
UGUAUGUCGUUGAGCUCGACUGGUAUCCGGAUGCGCCUGGCGAGAUGGUGGUGCUGACCUGUG-
ACACCCCAGAGGAGGAUGGGAUCAC IL-12sc
UUGGACCCUUGAUCAAUCCUCCGAAGUGCUCGGGUCUGGCAAGACUCUGACCAUACAAGUGAAAG-
AGUUUGGCGAUGCCGGGCAGUAC (RNA
ACUUGCCAUAAGGGCGGAGAAGUUCUGUCCCACUCACUGCUGCUGCUGCACAAGAAAGAGGACGGAAU-
UUGGAGUACCGAUAUCCUGA encoding
AAGAUCAGAAAGAGCCCAAGAACAAAACCUUCUUGCGGUGCGAAGCCAAGAACUACUCAGGGAG-
AUUUACUUGUUGGUGGCUGACGAC CDS)
GAUCAGCACCGAUCUGACUUUCUCCGUGAAAUCAAGUAGGGGAUCAUCUGACCCUCAAGGAGUCACAU-
GUGGAGCGGCUACUCUGAGC
GCUGAACGCGUAAGAGGGGACAAUAAGGAGUACGAGUAUAGCGUUGAGUGCCAAGAGGAUAGCGCAUGCCCC-
GCCGCCGAAGAAUCAU
UGCCCAUUGAAGUGAUGGUGGAUGCUGUACACAAGCUGAAGUAUGAGAACUACACAAGCUCCUUCUUCAUCC-
GUGACAUCAUCAAACC
AGAUCCUCCUAAGAACCUCCAGCUUAAACCUCUGAAGAACUCUAGACAGGUGGAAGUGUCUUGGGAGUAUCC-
CGACACCUGGUCUACA
CCACAUUCCUACUUCAGUCUCACAUUCUGCGUUCAGGUACAGGGCAAGUCCAAAAGGGAGAAGAAGGAUCGG-
GUCUUUACAGAUAAAA
CAAGUGCCACCGUUAUAUGCCGGAAGAAUGCCUCUAUUUCUGUGCGUGCGCAGGACAGAUACUAUAGCAGCU-
CUUGGAGUGAAUGGGC
CAGUGUCCCAUGUUCAGGGUCAUCCGGUGGUGGCGGCAGCCCCGGAGGCGGUAGCUCCAGAAAUCUCCCUGU-
GGCUACACCUGAUCCA
GGCAUGUUUCCCUGUUUGCACCAUAGCCAAAACCUCCUGAGAGCAGUCAGCAACAUGCUCCAGAAAGCUAGA-
CAAACACUGGAAUUCU
ACCCAUGCACCUCCGAGGAAAUAGAUCACGAGGAUAUCACUAAGGACAAAACAAGCACUGUCGAAGCAUGCC-
UUCCCUUGGAACUGAC
AAAGAACGAGAGUUGCCUUAAUUCAAGAGAAACAUCUUUCAUUACAAACGGUAGCUGCUUGGCAAGCAGAAA-
AACAUCUUUUAUGAUG
GCCCUUUGUCUGAGCAGUAUUUAUGAGGAUCUCAAAAUGUACCAGGUGGAGUUUAAGACCAUGAAUGCCAAG-
CUGCUGAUGGACCCAA
AGAGACAGAUUUUCCUCGAUCAGAAUAUGCUGGCUGUGAUUGAUGAACUGAUGCAGGCCUUGAAUUUCAACA-
GCGAAACCGUUCCCCA
GAAAAGCAGUCUUGAAGAACCUGACUUUUAUAAGACCAAGAUCAAACUGUGUAUUCUCCUGCAUGCCUUUAG-
AAUCAGAGCAGUCACU AUAGAUAGAGUGAUGUCCUACCUGAAUGCUUCCUGAUGA IFNalpha2b
(IFN.alpha.2b) 19 Human
MALTFALLVALLVLSCKSSCSVGCDLPQTHSLGSRRTLMLLAQMRRISLFSCLKDRHDFGFPQEE-
FGNQFQKAETIPVLHEMIQQIFN IFN.alpha.2b
LFSTKDSSAAWDETLLDKFYTELYQQLNDLEACVIQGVGVTETPLMKEDSILAVRKYFQRITLYLKEKKYSPC-
AWEVVRAEIMRSFSL (amino STNLQESLRSKE acid) 20 Human non-
ATGGCCTTGACCTTTGCTTTACTGGTGGCCCTCCTGGTGCTCAGCTGCAAGTCAAGCTGCTCTGTGGGCTGTG-
ATCTGCCTCAAACCC optimized
ACAGCCTGGGTAGCAGGAGGACCTTGATGCTCCTGGCACAGATGAGGAGAATCTCTCTTTTCT-
CCTGCTTGAAGGACAGACATGACTT IFN.alpha.2b
TGGATTTCCCCAGGAGGAGTTTGGCAACCAGTTCCAAAAGGCTGAAACCATCCCTGTCCTCCATGAGATGATC-
CAGCAGATCTTCAAC (CDS DNA)
CTTTTCAGCACAAAGGACTCATCTGCTGCTTGGGATGAGACCCTCCTAGACAAATTCTACACT-
GAACTCTACCAGCAGCTGAATGACC
TGGAAGCCTGTGTGATACAGGGGGTGGGGGTGACAGAGACTCCCCTGATGAAGGAGGACTCCATTCTGGCTG-
TGAGGAAATACTTCCA
AAGAATCACTCTCTATCTGAAAGAGAAGAAATACAGCCCTTGTGCCTGGGAGGTTGTCAGAGCAGAAATCAT-
GAGATCTTTTTCTTTG TCAACAAACTTGCAAGAAAGTTTAAGAAGTAAGGAATGATGA 21
Human
ATGGCCCTGACTTTTGCCCTTCTCGTGGCTTTGTTGGTGCTGAGTTGCAAATCTTCCTGTAGTGT-
CGGATGTGATCTGCCTCAAACCC optimized
ACAGTCTGGGATCTAGGAGAACACTGATGCTGTTGGCACAGATGAGGAGAATTAGCCTCTTTT-
CCTGCCTGAAGGATAGACATGACTT IFN.alpha.2b
CGGCTTTCCCCAAGAGGAGTTTGGCAATCAGTTCCAGAAAGCGGAAACGATTCCCGTTCTGCACGAGATGATC-
CAGCAGATCTTCAAC (CDS DNA)
CTCTTTTCAACCAAAGACAGCTCAGCAGCCTGGGATGAGACACTGCTGGACAAATTCTACACA-
GAACTGTATCAGCAGCTTAACGATC
TGGAGGCATGCGTGATCCAAGGGGTTGGTGTGACTGAAACTCCGCTTATGAAGGAGGACTCCATTCTGGCTG-
TACGGAAGTACTTCCA
GAGAATAACCCTCTATCTGAAGGAGAAGAAGTACTCACCATGTGCTTGGGAAGTCGTGAGAGCCGAAATCAT-
GAGATCCTTCAGCCTT AGCACCAATCTCCAGGAATCTCTGAGAAGCAAAGAGTGATGA 22
Human non-
AUGGCCUUGACCUUUGCUUUACUGGUGGCCCUCCUGGUGCUCAGCUGCAAGUCAAGCUGCUCUGUGGGCUGUG-
AUCUGCCUCAAACCC optimized
ACAGCCUGGGUAGCAGGAGGACCUUGAUGCUCCUGGCACAGAUGAGGAGAAUCUCUCUUUUCU-
CCUGCUUGAAGGACAGACAUGACUU IFN.alpha.2b (RNA
UGGAUUUCCCCAGGAGGAGUUUGGCAACCAGUUCCAAAAGGCUGAAACCAUCCCUGUCCUCCAUGAGAUGAUC-
CAGCAGAUCUUCAAC encoding
CUUUUCAGCACAAAGGACUCAUCUGCUGCUUGGGAUGAGACCCUCCUAGACAAAUUCUACACUG-
AACUCUACCAGCAGCUGAAUGACC CDS)
UGGAAGCCUGUGUGAUACAGGGGGUGGGGGUGACAGAGACUCCCCUGAUGAAGGAGGACUCCAUUCUG-
GCUGUGAGGAAAUACUUCCA
AAGAAUCACUCUCUAUCUGAAAGAGAAGAAAUACAGCCCUUGUGCCUGGGAGGUUGUCAGAGCAGAAAUCAU-
GAGAUCUUUUUCUUUG UCAACAAACUUGCAAGAAAGUUUAAGAAGUAAGGAAUGAUGA 23
Human
AUGGCCCUGACUUUUGCCCUUCUCGUGGCUUUGUUGGUGCUGAGUUGCAAAUCUUCCUGUAGUGU-
CGGAUGUGAUCUGCCUCAAACCC optimized
ACAGUCUGGGAUCUAGGAGAACACUGAUGCUGUUGGCACAGAUGAGGAGAAUUAGCCUCUUUU-
CCUGCCUGAAGGAUAGACAUGACUU IFN.alpha.2b (RNA
CGGCUUUCCCCAAGAGGAGUUUGGCAAUCAGUUCCAGAAAGCGGAAACGAUUCCCGUUCUGCACGAGAUGAUC-
CAGCAGAUCUUCAAC encoding
CUCUUUUCAACCAAAGACAGCUCAGCAGCCUGGGAUGAGACACUGCUGGACAAAUUCUACACAG-
AACUGUAUCAGCAGCUUAACGAUC CDS)
UGGAGGCAUGCGUGAUCCAAGGGGUUGGUGUGACUGAAACUCCGCUUAUGAAGGAGGACUCCAUUCUG-
GCUGUACGGAAGUACUUCCA
GAGAAUAACCCUCUAUCUGAAGGAGAAGAAGUACUCACCAUGUGCUUGGGAAGUCGUGAGAGCCGAAAUCAU-
GAGAUCCUUCAGCCUU AGCACCAAUCUCCAGGAAUCUCUGAGAAGCAAAGAGUGAUGA IL-15
sushi 24 Human IL-15
MAPRRARGCRTLGLPALLLLLLLRPPATRGITCPPPMSVEHADIWVKSYSLYSRERYICNSGFKRKAGTSSLT-
ECVLNKATNVAHWTT sushi
PSLKCIRDPALVHQRPAPPGGGSGGGGSGGGSGGGGSLQNWVNVISDLKKIEDLIQSMHIDATLYTE-
SDVHPSCKVTAMKCFLLELQV (amino
ISLESGDASIHDTVENLIILANNSLSSNGNVTESGCKECKELEEKNIKEFLQSFVHIVQMFINTS
acid) 25 Human IL-15
ATGGCCCCGCGGCGGGCGCGCGGCTGCCGGACCCTCGGTCTCCCGGCGCTGCTACTGCTGCTGCTGCTCCGGC-
CGCCGGCGACGCGGG sushi
GCATCACGTGCCCTCCCCCCATGTCCGTGGAACACGCAGACATCTGGGTCAAGAGCTACAGCTTGTA-
CTCCAGGGAGCGGTACATTTG (CDS DNA)
TAACTCTGGTTTCAAGCGTAAAGCCGGCACGTCCAGCCTGACGGAGTGCGTGTTGAACAAGGC-
CACGAATGTCGCCCACTGGACAACC Sequence
CCCAGTCTCAAATGCATTAGAGACCCTGCCCTGGTTCACCAAAGGCCAGCGCCACCCGGGGGAG-
GATCTGGCGGCGGTGGGTCTGGCG annotations
GGGGATCTGGCGGAGGAGGAAGCTTACAGAACTGGGTGAATGTAATAAGTGATTTGAAAAAAATTGAAGATCT-
TATTCAATCTATGCA CAPS: IL-15
TATTGATGCTACTTTATATACGGAAAGTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGAAGTGCTTTCTC-
TTGGAGTTACAAGTT sushi;
ATTTCACTTGAGTCCGGAGATGCAAGTATTCATGATACAGTAGAAAATCTGATCATCCTAGCAAAC-
AACAGTTTGTCTTCTAATGGGA CAPS:
ATGTAACAGAATCTGGATGCAAAGAATGTGAGGAACTGGAGGAAAAAAATATTAAAGAATTTTTGCA-
GAGTTTTGTACATATTGTCCA linker; AATGTTCATCAACACTTCTTGATGA CAPS:
mature IL-15 26 Human IL-15
AUGGCCCCGCGGCGGGCGCGCGGCUGCCGGACCCUCGGUCUCCCGGCGCUGCUACUGCUGCUGCUGCUCCGGC-
CGCCGGCGACGCGGG sushi (RNA
GCAUCACGUGCCCUCCCCCCAUGUCCGUGGAACACGCAGACAUCUGGGUCAAGAGCUACAGCUUGUACUCCAG-
GGAGCGGUACAUUUG encoding
UAACUCUGGUUUCAAGCGUAAAGCCGGCACGUCCAGCCUGACGGAGUGCGUGUUGAACAAGGCC-
ACGAAUGUCGCCCACUGGACAACC CDS)
CCCAGUCUCAAAUGCAUUAGAGACCCUGCCCUGGUUCACCAAAGGCCAGCGCCACCCGGGGGAGGAUC-
UGGCGGCGGUGGGUCUGGCG
GGGGAUCUGGCGGAGGAGGAAGCUUACAGAACUGGGUGAAUGUAAUAAGUGAUUUGAAAAAAAUUGAAGAUC-
UUAUUCAAUCUAUGCA
UAUUGAUGCUACUUUAUAUACGGAAAGUGAUGUUCACCCCAGUUGCAAAGUAACAGCAAUGAAGUGCUUUCU-
CUUGGAGUUACAAGUU
AUUUCACUUGAGUCCGGAGAUGCAAGUAUUCAUGAUACAGUAGAAAAUCUGAUCAUCCUAGCAAACAACAGU-
UUGUCUUCUAAUGGGA
AUGUAACAGAAUCUGGAUGCAAAGAAUGUGAGGAACUGGAGGAAAAAAAUAUUAAAGAAUUUUUGCAGAGUU-
UUGUACAUAUUGUCCA AAUGUUCAUCAACACUUCUUGAUGA GM-CSF 27 Human GM-
MWLQSLLLLGTVACSISAPARSPSPSTQPWEHVNAIQEARRLLNLSRDTAAEMNETVEVISEMFDLQEPTCLQ-
TRLELYKQGLRGSLT CSF (amino
KLKGPLTMMASHYKQHCPPTPETSCATQIITFESFKENLKDFLLVIPFDCWEPVQE acid) 28
Human GM-
ATGTGGCTCCAGAGCCTGCTGCTCTTGGGCACTGTGGCCTGCTCCATCTCTGCACCCGCCCGCTCGCCCAGCC-
CCAGCACGCAGCCCT CSF
GGGAGCATGTGAATGCCATCCAGGAGGCCCGGCGTCTGCTGAACCTGAGTAGAGACACTGCTGCTGAGA-
TGAATGAAACAGTAGAAGT (CDS DNA)
CATCTCAGAAATGTTTGACCTCCAGGAGCCGACCTGCCTACAGACCCGCCTGGAGCTGTACAA-
GCAGGGCCTGCGGGGCAGCCTCACC
AAGCTCAAGGGCCCCTTGACCATGATGGCCAGCCACTACAAGCAGCACTGCCCTCCAACCCCGGAAACTTCC-
TGTGCAACCCAGATTA
TCACCTTTGAAAGTTTCAAAGAGAACCTGAAGGACTTTCTGCTTGTCATCCCCTTTGACTGCTGGGAGCCAG-
TCCAGGAGTGATGA 29 Human GM-
AUGUGGCUCCAGAGCCUGCUGCUCUUGGGCACUGUGGCCUGCUCCAUCUCUGCACCCGCCCGCUCGCCCAGCC-
CCAGCACGCAGCCCU CSF (RNA
GGGAGCAUGUGAAUGCCAUCCAGGAGGCCCGGCGUCUGCUGAACCUGAGUAGAGACACUGCUGC-
UGAGAUGAAUGAAACAGUAGAAGU encoding
CAUCUCAGAAAUGUUUGACCUCCAGGAGCCGACCUGCCUACAGACCCGCCUGGAGCUGUACAAG-
CAGGGCCUGCGGGGCAGCCUCACC CDS)
AAGCUCAAGGGCCCCUUGACCAUGAUGGCCAGCCACUACAAGCAGCACUGCCCUCCAACCCCGGAAAC-
UUCCUGUGCAACCCAGAUUA
UCACCUUUGAAAGUUUCAAAGAGAACCUGAAGGACUUUCUGCUUGUCAUCCCCUUUGACUGCUGGGAGCCAG-
UCCAGGAGUGAUGA
TABLE-US-00002 TABLE 2 DESCRIPTION OF THE SEQUENCES (mouse
sequences and other sequences of the invention) SEQ ID NO:
Description SEQUENCE IL-2 mouse 30 ModA IL-2
MRVTAPRTLILLLSGALALTETWAGSGSAPTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFY-
MPKKATELKHLQCLE (amino
EELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFCQ-
SIISTLT acid, human IL-2 in combination with a mouse optimized
secretion sequence) 31 ModA IL-2
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGAGAGTGACCGCCCCCAGA-
ACCCTGATCCTGCTG (DNA:
CTGTCTGGCGCCCTGGCCCTGACAGAGACATGGGCCGGAAGCGGATCCGCACCTACTTCAAGTTCTA-
CAAAGAAAACACAGCTACAAC 5'UTR-
TGGAGCATTTACTTCTGGATTTACAGATGATTTTGAATGGAATTAATAATTACAAGAATCCCAAAC-
TCACCAGGATGCTCACATTTAA CDS-3'UTR)
GTTTTACATGCCCAAGAAGGCCACAGAACTGAAACATCTTCAGTGTCTAGAAGAAGAACTCAAACCTCTGGAG-
GAAGTGCTAAATTTA
GCTCAAAGCAAAAACTTTCACTTAAGACCCAGGGACTTAATCAGCAATATCAACGTAATAGTTCTGGAACTA-
AAGGGATCTGAAACAA
CATTCATGTGTGAATATGCTGATGAGACAGCAACCATTGTAGAATTTCTGAACAGATGGATTACCTTTTGTC-
AAAGCATCATCTCAAC
ACTGACTTGACTCGAGAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCA-
ACTACTAAACTGGGGG
ATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGCTGCGTCGAGAG-
CTCGCTTTCTTGCTGT
CCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCAACTACTAAACTGGGGGATATTATGAAGGGCCTTG-
AGCATCTGGATTCTGC
CTAATAAAAAACATTTATTTTCATTGCTGCGTCGAGACCTGGTCCAGAGTCGCTAGCAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAG
CATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAA 32 ModA IL-2
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGAGAGUGACCGCCCCCAGA-
ACCCUGAUCCUGCUG (RNA)
CUGUCUGGCGCCCUGGCCCUGACAGAGACAUGGGCCGGAAGCGGAUCCGCACCUACUUCAAGUUCUA-
CAAAGAAAACACAGCUACAAC
UGGAGCAUUUACUUCUGGAUUUACAGAUGAUUUUGAAUGGAAUUAAUAAUUACAAGAAUCCCAAACUCACCA-
GGAUGCUCACAUUUAA
GUUUUACAUGCCCAAGAAGGCCACAGAACUGAAACAUCUUCAGUGUCUAGAAGAAGAACUCAAACCUCUGGA-
GGAAGUGCUAAAUUUA
GCUCAAAGCAAAAACUUUCACUUAAGACCCAGGGACUUAAUCAGCAAUAUCAACGUAAUAGUUCUGGAACUA-
AAGGGAUCUGAAACAA
CAUUCAUGUGUGAAUAUGCUGAUGAGACAGCAACCAUUGUAGAAUUUCUGAACAGAUGGAUUACCUUUUGUC-
AAAGCAUCAUCUCAAC
ACUGACUUGACUCGAGAGCUCGCUUUCUUGCUGUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUCCA-
ACUACUAAACUGGGGG
AUAUUAUGAAGGGCCUUGAGCAUCUGGAUUCUGCCUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAGAG-
CUCGCUUUCUUGCUGU
CCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUCCAACUACUAAACUGGGGGAUAUUAUGAAGGGCCUUG-
AGCAUCUGGAUUCUGC
CUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAGACCUGGUCCAGAGUCGCUAGCAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAG
CAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAA 33 ModB IL-2
MGAMAPRTLLLLLAAALAPTQTRAGPGSAPTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFY-
MPKKATELKHLQCLE (amino
EELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFCQ-
SIISTLT acid) 34 ModB IL-2
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA (DNA:
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCA-
TGGCCCCTAGAACATTGCTCC 5'UTR-
TGCTGCTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCGCACCTACTTCAA-
GTTCTACAAAGAAAACACAGCT CDS-3'UTR)
ACAACTGGAGCATTTACTTCTGGATTTACAGATGATTTTGAATGGAATTAATAATTACAAGAATCCCAAACTC-
ACCAGGATGCTCACA
TTTAAGTTTTACATGCCCAAGAAGGCCACAGAACTGAAACATCTTCAGTGTCTAGAAGAAGAACTCAAACCT-
CTGGAGGAAGTGCTAA
ATTTAGCTCAAAGCAAAAACTTTCACTTAAGACCCAGGGACTTAATCAGCAATATCAACGTAATAGTTCTGG-
AACTAAAGGGATCTGA
AACAACATTCATGTGTGAATATGCTGATGAGACAGCAACCATTGTAGAATTTCTGAACAGATGGATTACCTT-
TTGTCAAAGCATCATC
TCAACACTGACTTGACTCGACGTCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGT-
ACCCCGAGTCTCCCCC
GACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCC-
CAAGCACGCAGCAATG
CAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAA-
GTTTAACTAAGCTATA
CTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAGCATATGAC
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
35 ModB IL-2
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCA-
UGGCCCCUAGAACAUUGCUCC
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCGCACCUACUUCAAGUUCUA-
CAAAGAAAACACAGCU
ACAACUGGAGCAUUUACUUCUGGAUUUACAGAUGAUUUUGAAUGGAAUUAAUAAUUACAAGAAUCCCAAACU-
CACCAGGAUGCUCACA
UUUAAGUUUUACAUGCCCAAGAAGGCCACAGAACUGAAACAUCUUCAGUGUCUAGAAGAAGAACUCAAACCU-
CUGGAGGAAGUGCUAA
AUUUAGCUCAAAGCAAAAACUUUCACUUAAGACCCAGGGACUUAAUCAGCAAUAUCAACGUAAUAGUUCUGG-
AACUAAAGGGAUCUGA
AACAACAUUCAUGUGUGAAUAUGCUGAUGAGACAGCAACCAUUGUAGAAUUUCUGAACAGAUGGAUUACCUU-
UUGUCAAAGCAUCAUC
UCAACACUGACUUGACUCGACGUCCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGGGU-
ACCCCGAGUCUCCCCC
GACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCUCC-
CAAGCACGCAGCAAUG
CAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGAAA-
GUUUAACUAAGCUAUA
CUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAGCAUAUGAC
UAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
IL-12 mouse 36 ModA murine
MRVTAPRTLILLLSGALALTETWAGSGSMWELEKDVYVVEVDWTPDAPGETVNLTCDTPEEDDITWTSDQRHG-
VIGSGKTLTITVKEF IL-12
LDAGQYTCHKGGETLSHSHLLLHKKENGIWSTEILKNFKNKTFLKCEAPNYSGRFTCSWLVQRNMDL-
KFNIKSSSSSPDSRAVTCGMA (amino
SLSAEKVTLDQRDYEKYSVSCQEDVTCPTAEETLPIELALEARQQNKYENYSTSFFIRDIIKPDPP-
KNLQMKPLKNSQVEVSWEYPDS acid)
WSTPHSYFSLKFFVRIQRKKEKMKETEEGCNQKGAFLVEKTSTEVQCKGGNVCVQAQDRYYNSSCSK-
WACVPCRVRSVPGVGVPGVGR
VIPVSGPARCLSQSRNLLKTTDDMVKTAREKLKHYSCTAEDIDHEDITRDQTSTLKTCLPLELHKNESCLAT-
RETSSTTRGSCLPPQK
TSLMMTLCLGSIYEDLKMYQTEFQAINAALQNHNHQQIILDKGMLVAIDELMQSLNHNGETLRQKPPVGEAD-
PYRVKMKLCILLHAFS TRVVTINRVMGYLSSA 37 ModA murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGAGAGTGACCGCCCCCAGA-
ACCCTGATCCTGCTG IL-12
CTGTCTGGCGCCCTGGCCCTGACAGAGACATGGGCCGGAAGCGGATCCATGTGGGAGCTGGAGAAAG-
ACGTTTATGTTGTAGAGGTGG (DNA:
ACTGGACTCCCGATGCCCCTGGAGAAACAGTGAACCTCACCTGTGACACGCCTGAAGAAGATGACAT-
CACCTGGACCTCAGACCAGAG 5'UTR-
ACATGGAGTCATAGGCTCTGGAAAGACCCTGACCATCACTGTCAAAGAGTTTCTAGATGCTGGCCA-
GTACACCTGCCACAAAGGAGGC CDS-3'UTR)
GAGACTCTGAGCCACTCACATCTGCTGCTCCACAAGAAGGAAAATGGAATTTGGTCCACTGAAATTTTAAAAA-
ATTTCAAAAACAAGA
CTTTCCTGAAGTGTGAAGCACCAAATTACTCCGGACGGTTCACGTGCTCATGGCTGGTGCAAAGAAACATGG-
ACTTGAAGTTCAACAT
CAAGAGCAGTAGCAGTTCCCCTGACTCTCGGGCAGTGACATGTGGAATGGCGTCTCTGTCTGCAGAGAAGGT-
CACACTGGACCAAAGG
GACTATGAGAAGTATTCAGTGTCCTGCCAGGAGGATGTCACCTGCCCAACTGCCGAGGAGACCCTGCCCATT-
GAACTGGCGTTGGAAG
CACGGCAGCAGAATAAATATGAGAACTACAGCACCAGCTTCTTCATCAGGGACATCATCAAACCAGACCCGC-
CCAAGAACTTGCAGAT
GAAGCCTTTGAAGAACTCACAGGTGGAGGTCAGCTGGGAGTACCCTGACTCCTGGAGCACTCCCCATTCCTA-
CTTCTCCCTCAAGTTC
TTTGTTCGAATCCAGCGCAAGAAAGAAAAGATGAAGGAGACAGAGGAGGGGTGTAACCAGAAAGGTGCGTTC-
CTCGTAGAGAAGACAT
CTACCGAAGTCCAATGCAAAGGCGGGAATGTCTGCGTGCAAGCTCAGGATCGCTATTACAATTCCTCATGCA-
GCAAGTGGGCATGTGT
TCCCTGCAGAGTCCGATCGGTTCCTGGAGTAGGGGTACCTGGAGTGGGCAGGGTCATACCGGTCTCTGGACC-
TGCCAGGTGTCTTAGC
CAGTCCCGAAACCTGCTGAAGACCACAGATGACATGGTGAAGACGGCCAGAGAAAAGCTGAAACATTATTCC-
TGCACTGCTGAAGACA
TCGATCATGAAGACATCACACGGGACCAAACCAGCACATTGAAGACCTGTTTACCACTGGAACTACACAAGA-
ACGAGAGTTGCCTGGC
TACTAGAGAGACTTCTTCCACAACAAGAGGGAGCTGCCTGCCCCCACAGAAGACGTCTTTGATGATGACCCT-
GTGCCTTGGTAGCATC
TATGAGGACTTGAAGATGTACCAGACAGAGTTCCAGGCCATCAACGCAGCACTTCAGAATCACAACCATCAG-
CAGATCATTCTAGACA
AGGGCATGCTGGTGGCCATCGATGAGCTGATGCAGTCTCTGAATCATAATGGCGAGACTCTGCGCCAGAAAC-
CTCCTGTGGGAGAAGC
AGACCCTTACAGAGTGAAAATGAAGCTCTGCATCCTGCTTCACGCCTTCAGCACCCGCGTCGTGACCATCAA-
CAGGGTGATGGGCTAT
CTGTCCAGCGCCTAATAGCTCGAGAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCC-
TAAGTCCAACTACTAA
ACTGGGGGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGCTGC-
GTCGAGAGCTCGCTTT
CTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCAACTACTAAACTGGGGGATATTATGAA-
GGGCCTTGAGCATCTG
GATTCTGCCTAATAAAAAACATTTATTTTCATTGCTGCGTCGAGACCTGGTCCAGAGTCGCTAGCAAAAAAA-
AAAAAAAAAAAAAAAA
AAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAA 38 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGAGAGUGACCGCCCCCAGA-
ACCCUGAUCCUGCUG IL-12 (RNA)
CUGUCUGGCGCCCUGGCCCUGACAGAGACAUGGGCCGGAAGCGGAUCCAUGUGGGAGCUGGAGAAAGACGUUU-
AUGUUGUAGAGGUGG
ACUGGACUCCCGAUGCCCCUGGAGAAACAGUGAACCUCACCUGUGACACGCCUGAAGAAGAUGACAUCACCU-
GGACCUCAGACCAGAG
ACAUGGAGUCAUAGGCUCUGGAAAGACCCUGACCAUCACUGUCAAAGAGUUUCUAGAUGCUGGCCAGUACAC-
CUGCCACAAAGGAGGC
GAGACUCUGAGCCACUCACAUCUGCUGCUCCACAAGAAGGAAAAUGGAAUUUGGUCCACUGAAAUUUUAAAA-
AAUUUCAAAAACAAGA
CUUUCCUGAAGUGUGAAGCACCAAAUUACUCCGGACGGUUCACGUGCUCAUGGCUGGUGCAAAGAAACAUGG-
ACUUGAAGUUCAACAU
CAAGAGCAGUAGCAGUUCCCCUGACUCUCGGGCAGUGACAUGUGGAAUGGCGUCUCUGUCUGCAGAGAAGGU-
CACACUGGACCAAAGG
GACUAUGAGAAGUAUUCAGUGUCCUGCCAGGAGGAUGUCACCUGCCCAACUGCCGAGGAGACCCUGCCCAUU-
GAACUGGCGUUGGAAG
CACGGCAGCAGAAUAAAUAUGAGAACUACAGCACCAGCUUCUUCAUCAGGGACAUCAUCAAACCAGACCCGC-
CCAAGAACUUGCAGAU
GAAGCCUUUGAAGAACUCACAGGUGGAGGUCAGCUGGGAGUACCCUGACUCCUGGAGCACUCCCCAUUCCUA-
CUUCUCCCUCAAGUUC
UUUGUUCGAAUCCAGCGCAAGAAAGAAAAGAUGAAGGAGACAGAGGAGGGGUGUAACCAGAAAGGUGCGUUC-
CUCGUAGAGAAGACAU
CUACCGAAGUCCAAUGCAAAGGCGGGAAUGUCUGCGUGCAAGCUCAGGAUCGCUAUUACAAUUCCUCAUGCA-
GCAAGUGGGCAUGUGU
UCCCUGCAGAGUCCGAUCGGUUCCUGGAGUAGGGGUACCUGGAGUGGGCAGGGUCAUACCGGUCUCUGGACC-
UGCCAGGUGUCUUAGC
CAGUCCCGAAACCUGCUGAAGACCACAGAUGACAUGGUGAAGACGGCCAGAGAAAAGCUGAAACAUUAUUCC-
UGCACUGCUGAAGACA
UCGAUCAUGAAGACAUCACACGGGACCAAACCAGCACAUUGAAGACCUGUUUACCACUGGAACUACACAAGA-
ACGAGAGUUGCCUGGC
UACUAGAGAGACUUCUUCCACAACAAGAGGGAGCUGCCUGCCCCCACAGAAGACGUCUUUGAUGAUGACCCU-
GUGCCUUGGUAGCAUC
UAUGAGGACUUGAAGAUGUACCAGACAGAGUUCCAGGCCAUCAACGCAGCACUUCAGAAUCACAACCAUCAG-
CAGAUCAUUCUAGACA
AGGGCAUGCUGGUGGCCAUCGAUGAGCUGAUGCAGUCUCUGAAUCAUAAUGGCGAGACUCUGCGCCAGAAAC-
CUCCUGUGGGAGAAGC
AGACCCUUACAGAGUGAAAAUGAAGCUCUGCAUCCUGCUUCACGCCUUCAGCACCCGCGUCGUGACCAUCAA-
CAGGGUGAUGGGCUAU
CUGUCCAGCGCCUAAUAGCUCGAGAGCUCGCUUUCUUGCUGUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCC-
UAAGUCCAACUACUAA
ACUGGGGGAUAUUAUGAAGGGCCUUGAGCAUCUGGAUUCUGCCUAAUAAAAAACAUUUAUUUUCAUUGCUGC-
GUCGAGAGCUCGCUUU
CUUGCUGUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUCCAACUACUAAACUGGGGGAUAUUAUGAA-
GGGCCUUGAGCAUCUG
GAUUCUGCCUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAGACCUGGUCCAGAGUCGCUAGCAAAAAAA-
AAAAAAAAAAAAAAAA
AAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAA 39 ModB murine
MGAMAPRTLLLLLAAALAPTQTRAGPGSMWELEKDVYVVEVDWTPDAPGETVNLTCDTPEEDDITWTSDQRHG-
VIGSGKTLTITVKEF IL-12
LDAGQYTCHKGGETLSHSHLLLHKKENGIWSTEILKNEKNKTFLKCEAPNYSGRFTCSWLVQRNMDL-
KFNIKSSSSSPDSRAVTCGMA (amino
SLSAEKVTLDQRDYEKYSVSCQEDVTCPTAEETLPIELALEARQQNKYENYSTSFFIRDIIKPDPP-
KNLQMKPLKNSQVEVSWEYPDS acid)
WSTPHSYFSLKFFVRIQRKKEKMKETEEGCNQKGAFLVEKTSTEVQCKGGNVCVQAQDRYYNSSCSK-
WACVPCRVRSVPGVGVPGVGR
VIPVSGPARCLSQSRNLLKTTDDMVKTAREKLKHYSCTAEDIDHEDITRDQTSTLKTCLPLELHKNESCLAT-
RETSSTTRGSCLPPQK
TSLMMTLCLGSIYEDLKMYQTEFQAINAALQNHNHQQIILDKGMLVAIDELMQSLNHNGETLRQKPPVGEAD-
PYRVKMKLCILLHAFS TRVVTINRVMGYLSSA 40 ModB murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA IL-12
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCA-
TGGCCCCTAGAACATTGCTCC (DNA:
TGCTGCTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCATGTGGGAGCTGGA-
GAAAGACGTTTATGTTGTAGA 5'UTR-
GGTGGACTGGACTCCCGATGCCCCTGGAGAAACAGTGAACCTCACCTGTGACACGCCTGAAGAAGA-
TGACATCACCTGGACCTCAGAC CDS-3'UTR)
CAGAGACATGGAGTCATAGGCTCTGGAAAGACCCTGACCATCACTGTCAAAGAGTTTCTAGATGCTGGCCAGT-
ACACCTGCCACAAAG
GAGGCGAGACTCTGAGCCACTCACATCTGCTGCTCCACAAGAAGGAAAATGGAATTTGGTCCACTGAAATTT-
TAAAAAATTTCAAAAA
CAAGACTTTCCTGAAGTGTGAAGCACCAAATTACTCCGGACGGTTCACGTGCTCATGGCTGGTGCAAAGAAA-
CATGGACTTGAAGTTC
AACATCAAGAGCAGTAGCAGTTCCCCTGACTCTCGGGCAGTGACATGTGGAATGGCGTCTCTGTCTGCAGAG-
AAGGTCACACTGGACC
AAAGGGACTATGAGAAGTATTCAGTGTCCTGCCAGGAGGATGTCACCTGCCCAACTGCCGAGGAGACCCTGC-
CCATTGAACTGGCGTT
GGAAGCACGGCAGCAGAATAAATATGAGAACTACAGCACCAGCTTCTTCATCAGGGACATCATCAAACCAGA-
CCCGCCCAAGAACTTG
CAGATGAAGCCTTTGAAGAACTCACAGGTGGAGGTCAGCTGGGAGTACCCTGACTCCTGGAGCACTCCCCAT-
TCCTACTTCTCCCTCA
AGTTCTTTGTTCGAATCCAGCGCAAGAAAGAAAAGATGAAGGAGACAGAGGAGGGGTGTAACCAGAAAGGTG-
CGTTCCTCGTAGAGAA
GACATCTACCGAAGTCCAATGCAAAGGCGGGAATGTCTGCGTGCAAGCTCAGGATCGCTATTACAATTCCTC-
ATGCAGCAAGTGGGCA
TGTGTTCCCTGCAGAGTCCGATCGGTTCCTGGAGTAGGGGTACCTGGAGTGGGCAGGGTCATACCGGTCTCT-
GGACCTGCCAGGTGTC
TTAGCCAGTCCCGAAACCTGCTGAAGACCACAGATGACATGGTGAAGACGGCCAGAGAAAAGCTGAAACATT-
ATTCCTGCACTGCTGA
AGACATCGATCATGAAGACATCACACGGGACCAAACCAGCACATTGAAGACCTGTTTACCACTGGAACTACA-
CAAGAACGAGAGTTGC
CTGGCTACTAGAGAGACTTCTTCCACAACAAGAGGGAGCTGCCTGCCCCCACAGAAGACGTCTTTGATGATG-
ACCCTGTGCCTTGGTA
GCATCTATGAGGACTTGAAGATGTACCAGACAGAGTTCCAGGCCATCAACGCAGCACTTCAGAATCACAACC-
ATCAGCAGATCATTCT
AGACAAGGGCATGCTGGTGGCCATCGATGAGCTGATGCAGTCTCTGAATCATAATGGCGAGACTCTGCGCCA-
GAAACCTCCTGTGGGA
GAAGCAGACCCTTACAGAGTGAAAATGAAGCTCTGCATCCTGCTTCACGCCTTCAGCACCCGCGTCGTGACC-
ATCAACAGGGTGATGG
GCTATCTGTCCAGCGCCTAATAGCTCGACGTCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCG-
TCCTGGGTACCCCGAG
TCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAG-
ACACCTCCCAAGCACG
CAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAAT-
AAACGAAAGTTTAACT
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAG
CATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAA 41 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA IL-12 (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCAUGGCCC-
CUAGAACAUUGCUCC
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCAUGUGGGAGCUGGAGAAAG-
ACGUUUAUGUUGUAGA
GGUGGACUGGACUCCCGAUGCCCCUGGAGAAACAGUGAACCUCACCUGUGACACGCCUGAAGAAGAUGACAU-
CACCUGGACCUCAGAC
CAGAGACAUGGAGUCAUAGGCUCUGGAAAGACCCUGACCAUCACUGUCAAAGAGUUUCUAGAUGCUGGCCAG-
UACACCUGCCACAAAG
GAGGCGAGACUCUGAGCCACUCACAUCUGCUGCUCCACAAGAAGGAAAAUGGAAUUUGGUCCACUGAAAUUU-
UAAAAAAUUUCAAAAA
CAAGACUUUCCUGAAGUGUGAAGCACCAAAUUACUCCGGACGGUUCACGUGCUCAUGGCUGGUGCAAAGAAA-
CAUGGACUUGAAGUUC
AACAUCAAGAGCAGUAGCAGUUCCCCUGACUCUCGGGCAGUGACAUGUGGAAUGGCGUCUCUGUCUGCAGAG-
AAGGUCACACUGGACC
AAAGGGACUAUGAGAAGUAUUCAGUGUCCUGCCAGGAGGAUGUCACCUGCCCAACUGCCGAGGAGACCCUGC-
CCAUUGAACUGGCGUU
GGAAGCACGGCAGCAGAAUAAAUAUGAGAACUACAGCACCAGCUUCUUCAUCAGGGACAUCAUCAAACCAGA-
CCCGCCCAAGAACUUG
CAGAUGAAGCCUUUGAAGAACUCACAGGUGGAGGUCAGCUGGGAGUACCCUGACUCCUGGAGCACUCCCCAU-
UCCUACUUCUCCCUCA
AGUUCUUUGUUCGAAUCCAGCGCAAGAAAGAAAAGAUGAAGGAGACAGAGGAGGGGUGUAACCAGAAAGGUG-
CGUUCCUCGUAGAGAA
GACAUCUACCGAAGUCCAAUGCAAAGGCGGGAAUGUCUGCGUGCAAGCUCAGGAUCGCUAUUACAAUUCCUC-
AUGCAGCAAGUGGGCA
UGUGUUCCCUGCAGAGUCCGAUCGGUUCCUGGAGUAGGGGUACCUGGAGUGGGCAGGGUCAUACCGGUCUCU-
GGACCUGCCAGGUGUC
UUAGCCAGUCCCGAAACCUGCUGAAGACCACAGAUGACAUGGUGAAGACGGCCAGAGAAAAGCUGAAACAUU-
AUUCCUGCACUGCUGA
AGACAUCGAUCAUGAAGACAUCACACGGGACCAAACCAGCACAUUGAAGACCUGUUUACCACUGGAACUACA-
CAAGAACGAGAGUUGC
CUGGCUACUAGAGAGACUUCUUCCACAACAAGAGGGAGCUGCCUGCCCCCACAGAAGACGUCUUUGAUGAUG-
ACCCUGUGCCUUGGUA
GCAUCUAUGAGGACUUGAAGAUGUACCAGACAGAGUUCCAGGCCAUCAACGCAGCACUUCAGAAUCACAACC-
AUCAGCAGAUCAUUCU
AGACAAGGGCAUGCUGGUGGCCAUCGAUGAGCUGAUGCAGUCUCUGAAUCAUAAUGGCGAGACUCUGCGCCA-
GAAACCUCCUGUGGGA
GAAGCAGACCCUUACAGAGUGAAAAUGAAGCUCUGCAUCCUGCUUCACGCCUUCAGCACCCGCGUCGUGACC-
AUCAACAGGGUGAUGG
GCUAUCUGUCCAGCGCCUAAUAGCUCGACGUCCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCG-
UCCUGGGUACCCCGAG
UCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAG-
ACACCUCCCAAGCACG
CAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAU-
AAACGAAAGUUUAACU
AAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAG
CAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAA IFN.alpha. (IFN.alpha.4) mouse 42 ModA murine
MRVTAPRTLILLLSGALALTETWAGSGSCDLPHTYNLGNKRALTVLEEMRRLPPLSCLKDRKDFGFPLEKVDN-
QQIQKAQAILVLRDL IFN.alpha.4
TQQILNLFTSKDLSATWNATLLDSFCNDLHQQLNDLKACVMQEPPLTQEDSLLAVRTYFHRITVYLRKKKHSL-
CAWEVIRAEVWRALS (amino SSTNLLARLSEEKE acid) 43 ModA murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGAGAGTGACCGCCCCCAGA-
ACCCTGATCCTGCTG IFN.alpha.4
CTGTCTGGCGCCCTGGCCCTGACAGAGACATGGGCCGGAAGCGGATCCTGTGACCTGCCTCACACTTATAACC-
TCGGGAACAAGAGGG (DNA:
CCTTGACAGTCCTGGAAGAAATGAGAAGACTCCCCCCTCTTTCCTGCCTGAAGGACAGGAAGGATTT-
TGGATTCCCCTTGGAGAAGGT 5'UTR-
GGATAACCAACAGATCCAGAAGGCTCAAGCCATCCTTGTGCTAAGAGATCTTACCCAGCAGATTTT-
GAACCTCTTCACATCAAAAGAC CDS-3'UTR)
TTGTCTGCTACTTGGAATGCAACTCTCCTAGACTCATTCTGCAATGACCTCCATCAGCAGCTCAATGATCTCA-
AAGCCTGTGTGATGC
AGGAACCTCCTCTGACCCAGGAAGACTCCCTGCTGGCTGTGAGGACATACTTCCACAGGATCACTGTGTACC-
TGAGAAAGAAGAAACA
CAGCCTCTGTGCCTGGGAGGTGATCAGAGCAGAAGTCTGGAGAGCCCTCTCTTCCTCAACCAACTTGCTGGC-
AAGACTGAGTGAGGAG
AAGGAGTGATAACTCGAGAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTC-
CAACTACTAAACTGGG
GGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGCTGCGTCGAG-
AGCTCGCTTTCTTGCT
GTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCAACTACTAAACTGGGGGATATTATGAAGGGCCT-
TGAGCATCTGGATTCT
GCCTAATAAAAAACATTTATTTTCATTGCTGCGTCGAGACCTGGTCCAGAGTCGCTAGCAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA
AGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAA 44 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGAGAGUGACCGCCCCCAGA-
ACCCUGAUCCUGCUG IFN.alpha.4 (RNA)
CUGUCUGGCGCCCUGGCCCUGACAGAGACAUGGGCCGGAAGCGGAUCCUGUGACCUGCCUCACACUUAUAACC-
UCGGGAACAAGAGGG
CCUUGACAGUCCUGGAAGAAAUGAGAAGACUCCCCCCUCUUUCCUGCCUGAAGGACAGGAAGGAUUUUGGAU-
UCCCCUUGGAGAAGGU
GGAUAACCAACAGAUCCAGAAGGCUCAAGCCAUCCUUGUGCUAAGAGAUCUUACCCAGCAGAUUUUGAACCU-
CUUCACAUCAAAAGAC
UUGUCUGCUACUUGGAAUGCAACUCUCCUAGACUCAUUCUGCAAUGACCUCCAUCAGCAGCUCAAUGAUCUC-
AAAGCCUGUGUGAUGC
AGGAACCUCCUCUGACCCAGGAAGACUCCCUGCUGGCUGUGAGGACAUACUUCCACAGGAUCACUGUGUACC-
UGAGAAAGAAGAAACA
CAGCCUCUGUGCCUGGGAGGUGAUCAGAGCAGAAGUCUGGAGAGCCCUCUCUUCCUCAACCAACUUGCUGGC-
AAGACUGAGUGAGGAG
AAGGAGUGAUAACUCGAGAGCUCGCUUUCUUGCUGUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUC-
CAACUACUAAACUGGG
GGAUAUUAUGAAGGGCCUUGAGCAUCUGGAUUCUGCCUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAG-
AGCUCGCUUUCUUGCU
GUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUCCAACUACUAAACUGGGGGAUAUUAUGAAGGGCCU-
UGAGCAUCUGGAUUCU
GCCUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAGACCUGGUCCAGAGUCGCUAGCAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA
AGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAA 45 ModB murine
MGAMAPRTLLLLLAAALAPTQTRAGPGSCDLPHTYNLGNKRALTVLEEMRRLPPLSCLKDRKDFGFPLEKVDN-
QQIQKAQAILVLRDL IFN.alpha.4
TQQILNLFTSKDLSATWNATLLDSFCNDLHQQLNDLKACVMQEPPLTQEDSLLAVRTYFHRITVYLRKKKHSL-
CAWEVIRAEVWRALS (amino SSTNLLARLSEEKE acid) 46 ModB murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA IFN.alpha.4
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCATGGCCC-
CTAGAACATTGCTCC (DNA:
TGCTGCTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCTGTGACCTGCCTCA-
CACTTATAACCTCGGGAACAA 5'UTR-
GAGGGCCTTGACAGTCCTGGAAGAAATGAGAAGACTCCCCCCTCTTTCCTGCCTGAAGGACAGGAA-
GGATTTTGGATTCCCCTTGGAG CDS-3'UTR)
AAGGTGGATAACCAACAGATCCAGAAGGCTCAAGCCATCCTTGTGCTAAGAGATCTTACCCAGCAGATTTTGA-
ACCTCTTCACATCAA
AAGACTTGTCTGCTACTTGGAATGCAACTCTCCTAGACTCATTCTGCAATGACCTCCATCAGCAGCTCAATG-
ATCTCAAAGCCTGTGT
GATGCAGGAACCTCCTCTGACCCAGGAAGACTCCCTGCTGGCTGTGAGGACATACTTCCACAGGATCACTGT-
GTACCTGAGAAAGAAG
AAACACAGCCTCTGTGCCTGGGAGGTGATCAGAGCAGAAGTCTGGAGAGCCCTCTCTTCCTCAACCAACTTG-
CTGGCAAGACTGAGTG
AGGAGAAGGAGTGATAACTCGACGTCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGG-
GTACCCCGAGTCTCCC
CCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCT-
CCCAAGCACGCAGCAA
TGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGA-
AAGTTTAACTAAGCTA
TACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAGCATATG
ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
A 47 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA IFN.alpha.4 (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCAUGGCCC-
CUAGAACAUUGCUCC
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCUGUGACCUGCCUCACACUU-
AUAACCUCGGGAACAA
GAGGGCCUUGACAGUCCUGGAAGAAAUGAGAAGACUCCCCCCUCUUUCCUGCCUGAAGGACAGGAAGGAUUU-
UGGAUUCCCCUUGGAG
AAGGUGGAUAACCAACAGAUCCAGAAGGCUCAAGCCAUCCUUGUGCUAAGAGAUCUUACCCAGCAGAUUUUG-
AACCUCUUCACAUCAA
AAGACUUGUCUGCUACUUGGAAUGCAACUCUCCUAGACUCAUUCUGCAAUGACCUCCAUCAGCAGCUCAAUG-
AUCUCAAAGCCUGUGU
GAUGCAGGAACCUCCUCUGACCCAGGAAGACUCCCUGCUGGCUGUGAGGACAUACUUCCACAGGAUCACUGU-
GUACCUGAGAAAGAAG
AAACACAGCCUCUGUGCCUGGGAGGUGAUCAGAGCAGAAGUCUGGAGAGCCCUCUCUUCCUCAACCAACUUG-
CUGGCAAGACUGAGUG
AGGAGAAGGAGUGAUAACUCGACGUCCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGG-
GUACCCCGAGUCUCCC
CCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCU-
CCCAAGCACGCAGCAA
UGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGA-
AAGUUUAACUAAGCUA
UACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAGCAUAUG
ACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
A
IL-15 sushi mouse 48 ModA murine
MGAMAPRTLLLLLAAALAPTQTRAGPGSTTCPPPVSIEHADIRVKNYSVNSRERYVCNSGFKRKAGTSTLIEC-
VINKNTNVAHWTTPS IL-15 sushi
LKCIRDPSLAGGSGGSGGSGGSGGSGGSGGNWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCF-
LLELQVILHEYSNMT (amino
LNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS acid) 49
ModA murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGGGCGCCATGGCCCCTAGA-
ACATTGCTCCTGCTG IL-15 sushi
CTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCACCACGTGTCCACCTCCCGTATCTA-
TTGAGCATGCTGACA (DNA:
TCCGGGTCAAGAATTACAGTGTGAACTCCAGGGAGAGGTATGTCTGTAACTCTGGCTTTAAGCGGAA-
AGCTGGAACATCCACCCTGAT 5'UTR-
TGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCATCAG-
AGACCCCTCCCTAGCTGGAGGG CDS-3'UTR)
AGCGGAGGCTCTGGCGGAAGCGGCGGGTCTGGAGGCTCCGGGGGAAGCGGCGGAAATTGGATCGACGTGCGCT-
ACGACCTGGAAAAGA
TCGAGAGCCTGATCCAGAGCATCCACATCGACACCACCCTGTACACCGACAGCGACTTCCACCCCAGCTGCA-
AAGTGACCGCTATGAA
CTGCTTCCTGCTGGAACTGCAAGTGATCCTGCACGAGTACAGCAACATGACCCTGAACGAGACAGTGCGGAA-
CGTGCTGTACCTGGCC
AACAGCACCCTGAGCAGCAACAAGAACGTGGCCGAGAGCGGCTGCAAAGAGTGCGAGGAACTGGAAGAAAAG-
ACCTTCACCGAGTTTC
TGCAGAGCTTCATCAGGATCGTGCAGATGTTCATCAACACCTCTTGATGAGTCGACGTCCTGGTACTGCATG-
CACGCAATGCTAGCTG
CCCCTTTCCCGTCCTGGGTACCCCGAGTCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGC-
CCCACTCACCACCTCT
GCTAGTTCCAGACACCTCCCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGG-
AAACAGCAGTGATTAA
CCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACAC-
CCTCGAGCTAGCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA 50 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGGGCGCCAUGGCCCCUAGA-
ACAUUGCUCCUGCUG IL-15 sushi
CUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCACCACGUGUCCACCUCCCGUAUCUA-
UUGAGCAUGCUGACA (RNA)
UCCGGGUCAAGAAUUACAGUGUGAACUCCAGGGAGAGGUAUGUCUGUAACUCUGGCUUUAAGCGGAA-
AGCUGGAACAUCCACCCUGAU
UGAGUGUGUGAUCAACAAGAACACAAAUGUUGCCCACUGGACAACUCCCAGCCUCAAGUGCAUCAGAGACCC-
CUCCCUAGCUGGAGGG
AGCGGAGGCUCUGGCGGAAGCGGCGGGUCUGGAGGCUCCGGGGGAAGCGGCGGAAAUUGGAUCGACGUGCGC-
UACGACCUGGAAAAGA
UCGAGAGCCUGAUCCAGAGCAUCCACAUCGACACCACCCUGUACACCGACAGCGACUUCCACCCCAGCUGCA-
AAGUGACCGCUAUGAA
CUGCUUCCUGCUGGAACUGCAAGUGAUCCUGCACGAGUACAGCAACAUGACCCUGAACGAGACAGUGCGGAA-
CGUGCUGUACCUGGCC
AACAGCACCCUGAGCAGCAACAAGAACGUGGCCGAGAGCGGCUGCAAAGAGUGCGAGGAACUGGAAGAAAAG-
ACCUUCACCGAGUUUC
UGCAGAGCUUCAUCAGGAUCGUGCAGAUGUUCAUCAACACCUCUUGAUGAGUCGACGUCCUGGUACUGCAUG-
CACGCAAUGCUAGCUG
CCCCUUUCCCGUCCUGGGUACCCCGAGUCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGC-
CCCACUCACCACCUCU
GCUAGUUCCAGACACCUCCCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGG-
AAACAGCAGUGAUUAA
CCUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACAC-
CCUCGAGCUAGCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA 51 ModB murine
MGAMAPRTLLLLLAAALAPTQTRAGPGSTTCPPPVSIEHADIRVKNYSVNSRERYVCNSGFKRKAGTSTLIEC-
VINKNTNVAHWTTPS IL-15 sushi
LKCIRDPSLAGGSGGSGGSGGSGGSGGSGGNWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCF-
LLELQVILHEYSNMT (amino
LNETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS acid) 52
ModB murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA IL-15 sushi
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCATGGCCC-
CTAGAACATTGCTCC (DNA:
TGCTGCTGGCCGCTGCCCTGGCCCCTACZCAGACAAGAGCTGGACCTGGATCCACCACGTGTCCACC-
TCCCGTATCTATTGAGCATGC 5'UTR-
TGACATCCGGGTCAAGAATTACAGTGTGAACTCCAGGGAGAGGTATGTCTGTAACTCTGGCTTTAA-
GCGGAAAGCTGGAACATCCACC CDS-3'UTR)
CTGATTGAGTGTGTGATCAACAAGAACACAAATGTTGCCCACTGGACAACTCCCAGCCTCAAGTGCATCAGAG-
ACCCCTCCCTAGCTG
GAGGGAGCGGAGGCTCTGGCGGAAGCGGCGGGTCTGGAGGCTCCGGGGGAAGCGGCGGAAATTGGATCGACG-
TGCGCTACGACCTGGA
AAAGATCGAGAGCCTGATCCAGAGCATCCACATCGACACCACCCTGTACACCGACAGCGACTTCCACCCCAG-
CTGCAAAGTGACCGCT
ATGAACTGCTTCCTGCTGGAACTGCAAGTGATCCTGCACGAGTACAGCAACATGACCCTGAACGAGACAGTG-
CGGAACGTGCTGTACC
TGGCCAACAGCACCCTGAGCAGCAACAAGAACGTGGCCGAGAGCGGCTGCAAAGAGTGCGAGGAACTGGAAG-
AAAAGACCTTCACCGA
GTTTCTGCAGAGCTTCATCAGGATCGTGCAGATGTTCATCAACACCTCTTGATGAGTCGACGTCCTGGTACT-
GCATGCACGCAATGCT
AGCTGCCCCTTTCCCGTCCTGGGTACCCCGAGTCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCA-
CCTGCCCCACTCACCA
CCTCTGCTAGTTCCAGACACCTCCCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCC-
ACGGGAAACAGCAGTG
ATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGC-
CACACCCTCGAGCTAG
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA 53 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA IL-15 sushi
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCAUGGCCC-
CUAGAACAUUGCUCC (RNA)
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCACCACGUGUCCACC-
UCCCGUAUCUAUUGAGCAUGC
UGACAUCCGGGUCAAGAAUUACAGUGUGAACUCCAGGGAGAGGUAUGUCUGUAACUCUGGCUUUAAGCGGAA-
AGCUGGAACAUCCACC
CUGAUUGAGUGUGUGAUCAACAAGAACACAAAUGUUGCCCACUGGACAACUCCCAGCCUCAAGUGCAUCAGA-
GACCCCUCCCUAGCUG
GAGGGAGCGGAGGCUCUGGCGGAAGCGGCGGGUCUGGAGGCUCCGGGGGAAGCGGCGGAAAUUGGAUCGACG-
UGCGCUACGACCUGGA
AAAGAUCGAGAGCCUGAUCCAGAGCAUCCACAUCGACACCACCCUGUACACCGACAGCGACUUCCACCCCAG-
CUGCAAAGUGACCGCU
AUGAACUGCUUCCUGCUGGAACUGCAAGUGAUCCUGCACGAGUACAGCAACAUGACCCUGAACGAGACAGUG-
CGGAACGUGCUGUACC
UGGCCAACAGCACCCUGAGCAGCAACAAGAACGUGGCCGAGAGCGGCUGCAAAGAGUGCGAGGAACUGGAAG-
AAAAGACCUUCACCGA
GUUUCUGCAGAGCUUCAUCAGGAUCGUGCAGAUGUUCAUCAACACCUCUUGAUGAGUCGACGUCCUGGUACU-
GCAUGCACGCAAUGCU
AGCUGCCCCUUUCCCGUCCUGGGUACCCCGAGUCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCA-
CCUGCCCCACUCACCA
CCUCUGCUAGUUCCAGACACCUCCCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCC-
ACGGGAAACAGCAGUG
AUUAACCUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGC-
CACACCCUCGAGCUAG
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA GM-CSF mouse 54 ModA
murine
MWLQNLLFLGIVVYSLSAPTRSPITVTRPWKHVEAIKEALNLLDDMPVTLNEEVEVVSNEFSFKKLTCVQTRL-
KIFEQGLRGNFTKLK GM-CSF
GALNMTASYYQTYCPPTPETDCETQVTTYADFIDSLKTFLTDIPFECKKPGQK (amino acid)
55 ModA murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGTGGCTGCAGAACCTGCTG-
TTCCTGGGCATCGTG GM-CSF
GTGTACAGCCTGAGCGCCCCCACCAGGAGCCCCATCACCGTGACCAGGCCCTGGAAGCACGTGGAG-
GCCATCAAGGAGGCCCTGAACC (DNA:
TGCTGGACGACATGCCCGTGACCCTGAACGAGGAGGTGGAGGTGGTGAGCAACGAGTTCAGCTTCAA-
GAAGCTGACCTGCGTGCAGAC 5'UTR-
CAGGCTGAAGATCTTCGAGCAGGGCCTGAGGGGCAACTTCACCAAGCTGAAGGGCGCCCTGAACAT-
GACCGCCAGCTACTACCAGACC CDS-3'UTR)
TACTGCCCCCCCACCCCCGAGACCGACTGCGAGACCCAGGTGACCACCTACGCCGACTTCATCGACAGCCTGA-
AGACCTTCCTGACCG
ACATCCCCTTCGAGTGCAAGAAGCCCGGCCAGAAGTGATGACTCGAGCTGGTACTGCATGCACGCAATGCTA-
GCTGCCCCTTTCCCGT
CCTGGGTACCCCGAGTCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCAC-
CTCTGCTAGTTCCAGA
CACCTCCCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGA-
TTAACCTTTAGCAATA
AACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCGAGACCTGGTC-
CAGAGTCGCTAGCCGC
GTCGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA 56 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGUGGCUGCAGAACCUGCUG-
UUCCUGGGCAUCGUG GM-CSF
GUGUACAGCCUGAGCGCCCCCACCAGGAGCCCCAUCACCGUGACCAGGCCCUGGAAGCACGUGGAG-
GCCAUCAAGGAGGCCCUGAACC (RNA)
UGCUGGACGACAUGCCCGUGACCCUGAACGAGGAGGUGGAGGUGGUGAGCAACGAGUUCAGCUUCAA-
GAAGCUGACCUGCGUGCAGAC
CAGGCUGAAGAUCUUCGAGCAGGGCCUGAGGGGCAACUUCACCAAGCUGAAGGGCGCCCUGAACAUGACCGC-
CAGCUACUACCAGACC
UACUGCCCCCCCACCCCCGAGACCGACUGCGAGACCCAGGUGACCACCUACGCCGACUUCAUCGACAGCCUG-
AAGACCUUCCUGACCG
ACAUCCCCUUCGAGUGCAAGAAGCCCGGCCAGAAGUGAUGACUCGAGCUGGUACUGCAUGCACGCAAUGCUA-
GCUGCCCCUUUCCCGU
CCUGGGUACCCCGAGUCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCAC-
CUCUGCUAGUUCCAGA
CACCUCCCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGA-
UUAACCUUUAGCAAUA
AACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCGAGACCUGGUC-
CAGAGUCGCUAGCCGC
GUCGCUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA 57 ModB murine
MWLQNLLFLGIVVYSLSAPTRSPITVTRPWKHVEAIKEALNLLDDMPVTLNEEVEVVSNEFSFKKLTCVQTRL-
KIFEQGLRGNFTKLK GM-CSF
GALNMTASYYQTYCPPTPETDCETQVTTYADFIDSLKTFLTDIPFECKKPGQK (amino acid)
58 ModB murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA GM-CSF
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGTGGCTG-
CAGAACCTGCTGTTCCTGGGCA (DNA:
TCGTGGTGTACAGCCTGAGCGCCCCCACCAGGAGCCCCATCACCGTGACCAGGCCCTGGAAGCACGT-
GGAGGCCATCAAGGAGGCCCT 5'UTR-
GAACCTGCTGGACGACATGCCCGTGACCCTGAACGAGGAGGTGGAGGTGGTGAGCAACGAGTTCAG-
CTTCAAGAAGCTGACCTGCGTG CDS-3'UTR)
CAGACCAGGCTGAAGATCTTCGAGCAGGGCCTGAGGGGCAACTTCACCAAGCTGAAGGGCGCCCTGAACATGA-
CCGCCAGCTACTACC
AGACCTACTGCCCCCCCACCCCCGAGACCGACTGCGAGACCCAGGTGACCACCTACGCCGACTTCATCGACA-
GCCTGAAGACCTTCCT
GACCGACATCCCCTTCGAGTGCAAGAAGCCCGGCCAGAAGTGATGACTCGAGCTGGTACTGCATGCACGCAA-
TGCTAGCTGCCCCTTT
CCCGTCCTGGGTACCCCGAGTCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTC-
ACCACCTCTGCTAGTT
CCAGACACCTCCCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGC-
AGTGATTAACCTTTAG
CAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCGAGACC-
TGGTCCAGAGTCGCTA
GCCGCGTCGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 59 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA GM-CSF
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGUGGCUG-
CAGAACCUGCUGUUCCUGGGCA (RNA)
UCGUGGUGUACAGCCUGAGCGCCCCCACCAGGAGCCCCAUCACCGUGACCAGGCCCUGGAAGCACGU-
GGAGGCCAUCAAGGAGGCCCU
GAACCUGCUGGACGACAUGCCCGUGACCCUGAACGAGGAGGUGGAGGUGGUGAGCAACGAGUUCAGCUUCAA-
GAAGCUGACCUGCGUG
CAGACCAGGCUGAAGAUCUUCGAGCAGGGCCUGAGGGGCAACUUCACCAAGCUGAAGGGCGCCCUGAACAUG-
ACCGCCAGCUACUACC
AGACCUACUGCCCCCCCACCCCCGAGACCGACUGCGAGACCCAGGUGACCACCUACGCCGACUUCAUCGACA-
GCCUGAAGACCUUCCU
GACCGACAUCCCCUUCGAGUGCAAGAAGCCCGGCCAGAAGUGAUGACUCGAGCUGGUACUGCAUGCACGCAA-
UGCUAGCUGCCCCUUU
CCCGUCCUGGGUACCCCGAGUCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUC-
ACCACCUCUGCUAGUU
CCAGACACCUCCCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGC-
AGUGAUUAACCUUUAG
CAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCGAGACC-
UGGUCCAGAGUCGCUA
GCCGCGUCGCUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA FLT3L mouse 60
ModA FLT3L
MGAMAPRTLLLLLAAALAPTQTRAGPGSTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCG-
GLWRLVLAQRWMERL (amino
KTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSR-
CLELQCQPDSSTLPPPWSPRPL acid, human EATAPTAPQPP FLT3L in combination
with a mouse optimized secretion sequence)) 61 ModA FLT3L
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGGGCGCCATGGCCCCTAGA-
ACATTGCTCCTGCTG (DNA:
CTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCACCCAGGACTGCAGCTTCC-
AGCACTCCCCTATCTCCTCCG 5'UTR-
ACTTCGCCGTGAAGATCCGGGAGCTGTCCGATTACCTGCTGCAGGACTACCCTGTGACCGTGGCCA-
GCAACCTGCAGGACGAAGAACT CDS-3'UTR)
GTGTGGCGGCCTGTGGCGGCTGGTGCTGGCCCAGCGGTGGATGGAACGGCTGAAAACCGTGGCCGGCTCCAAG-
ATGCAGGGCCTGCTC
GAGCGGGTGAACACCGAGATCCACTTCGTGACCAAGTGCGCCTTCCAGCCTCCTCCTTCCTGCCTGCGGTTC-
GTGCAGACCAACATCT
CCCGGCTGCTGCAGGAAACCTCCGAGCAGCTGGTCGCCCTGAAGCCTTGGATCACCCGGCAGAACTTCTCCC-
GGTGTCTGGAACTCCA
GTGTCAGCCCGACTCCTCCACCCTGCCTCCTCCCTGGTCCCCCAGGCCTCTGGAAGCCACCGCCCCTACCGC-
CCCACAGCCTCCTTGA
TAGGTCGACGTCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGTACCCCGAGTCTC-
CCCCGACCTCGGGTCC
CAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCCAAGCACGCAGC-
AATGCAGCTCAAAACG
CTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGC-
TATACTAACCCCAGGG
TTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATA-
TGACTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 62 ModA
FLT3L
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGGGCGCCAUGGCCCCUAGA-
ACAUUGCUCCUGCUG (RNA)
CUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCACCCAGGACUGCAGCUUCC-
AGCACUCCCCUAUCUCCUCCG
ACUUCGCCGUGAAGAUCCGGGAGCUGUCCGAUUACCUGCUGCAGGACUACCCUGUGACCGUGGCCAGCAACC-
UGCAGGACGAAGAACU
GUGUGGCGGCCUGUGGCGGCUGGUGCUGGCCCAGCGGUGGAUGGAACGGCUGAAAACCGUGGCCGGCUCCAA-
GAUGCAGGGCCUGCUC
GAGCGGGUGAACACCGAGAUCCACUUCGUGACCAAGUGCGCCUUCCAGCCUCCUCCUUCCUGCCUGCGGUUC-
GUGCAGACCAACAUCU
CCCGGCUGCUGCAGGAAACCUCCGAGCAGCUGGUCGCCCUGAAGCCUUGGAUCACCCGGCAGAACUUCUCCC-
GGUGUCUGGAACUCCA
GUGUCAGCCCGACUCCUCCACCCUGCCUCCUCCCUGGUCCCCCAGGCCUCUGGAAGCCACCGCCCCUACCGC-
CCCACAGCCUCCUUGA
UAGGUCGACGUCCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGGGUACCCCGAGUCUC-
CCCCGACCUCGGGUCC
CAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCUCCCAAGCACGCAGC-
AAUGCAGCUCAAAACG
CUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGAAAGUUUAACUAAGC-
UAUACUAACCCCAGGG
UUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUA-
UGACUAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 63 ModB
FLT3L
MGAMAPRTLLLLLAAALAPTQTRAGPGSTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCG-
GLWRLVLAQRWMERL (amino
KTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSR-
CLELQCQPDSSTLPPPWSPRPL acid, human EATAPTAPQPP FLT3L in combination
with a mouse optimized secretion sequence) 64 ModB FLT3L
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA (DNA:
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCA-
TGGCCCCTAGAACATTGCTCC 5'UTR-
TGCTGCTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCACCCAGGACTGCA-
GCTTCCAGCACTCCCCTATCTC CDS-3'UTR)
CTCCGACTTCGCCGTGAAGATCCGGGAGCTGTCCGATTACCTGCTGCAGGACTACCCTGTGACCGTGGCCAGC-
AACCTGCAGGACGAA
GAACTGTGTGGCGGCCTGTGGCGGCTGGTGCTGGCCCAGCGGTGGATGGAACGGCTGAAAACCGTGGCCGGC-
TCCAAGATGCAGGGCC
TGCTCGAGCGGGTGAACACCGAGATCCACTTCGTGACCAAGTGCGCCTTCCAGCCTCCTCCTTCCTGCCTGC-
GGTTCGTGCAGACCAA
CATCTCCCGGCTGCTGCAGGAAACCTCCGAGCAGCTGGTCGCCCTGAAGCCTTGGATCACCCGGCAGAACTT-
CTCCCGGTGTCTGGAA
CTCCAGTGTCAGCCCGACTCCTCCACCCTGCCTCCTCCCTGGTCCCCCAGGCCTCTGGAAGCCACCGCCCCT-
ACCGCCCCACAGCCTC
CTTGATAGGTCGACGTCCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGGGTACCCCGA-
GTCTCCCCCGACCTCG
GGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCTCCCAAGCAC-
GCAGCAATGCAGCTCA
AAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC-
TAAGCTATACTAACCC
CAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
GCATATGACTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 65
ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA FLT3L (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCAUGGCCC-
CUAGAACAUUGCUCC
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCACCCAGGACUGCAGCUUCC-
AGCACUCCCCUAUCUC
CUCCGACUUCGCCGUGAAGAUCCGGGAGCUGUCCGAUUACCUGCUGCAGGACUACCCUGUGACCGUGGCCAG-
CAACCUGCAGGACGAA
GAACUGUGUGGCGGCCUGUGGCGGCUGGUGCUGGCCCAGCGGUGGAUGGAACGGCUGAAAACCGUGGCCGGC-
UCCAAGAUGCAGGGCC
UGCUCGAGCGGGUGAACACCGAGAUCCACUUCGUGACCAAGUGCGCCUUCCAGCCUCCUCCUUCCUGCCUGC-
GGUUCGUGCAGACCAA
CAUCUCCCGGCUGCUGCAGGAAACCUCCGAGCAGCUGGUCGCCCUGAAGCCUUGGAUCACCCGGCAGAACUU-
CUCCCGGUGUCUGGAA
CUCCAGUGUCAGCCCGACUCCUCCACCCUGCCUCCUCCCUGGUCCCCCAGGCCUCUGGAAGCCACCGCCCCU-
ACCGCCCCACAGCCUC
CUUGAUAGGUCGACGUCCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGGGUACCCCGA-
GUCUCCCCCGACCUCG
GGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCUCCCAAGCAC-
GCAGCAAUGCAGCUCA
AAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGAAAGUUUAAC-
UAAGCUAUACUAACCC
CAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
GCAUAUGACUAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
41BBL mouse 66 ModA murine
MDQHTLDVEDTADARHPAGTSCPSDAALLRDTGLLADAALLSDTVRPTNAALPTDAAYPAVNVRDREAAWPPA-
LNFCSRHPKLYGLVA 41BBL
LVLLLLIAACVPIFTRTEPRPALTITTSPNLGTRENNADQVTPVSHIGCPNTTQQGSPVFAKLLAKN-
QASLCNTTLNWHSQDGAGSSY (amino
LSQGLRYEEDKKELVVDSPGLYYVFLELKLSPTFTNTGHKVQGWVSLVLQAKPQVDDFDNLALTVE-
LFPCSMENKLVDRSWSQLLLLK acid)
AGHRLSVGLRAYLHGAQDAYRDWELSYPNTTSFGLFLVKPDNPWE 67 ModA murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGGACCAGCACACACTTGAT-
GTGGAGGATACCGCG 41BBL
GATGCCAGACATCCAGCAGGTACTTCGTGCCCCTCGGATGCGGCGCTCCTCAGAGATACCGGGCTCC-
TCGCGGACGCTGCGCTCCTCT (DNA:
CAGATACTGTGCGCCCCACAAATGCCGCGCTCCCCACGGATGCTGCCTACCCTGCGGTTAATGTTCG-
GGATCGCGAGGCCGCGTGGCC 5'UTR-
GCCTGCACTGAACTTCTGTTCCCGCCACCCAAAGCTCTATGGCCTAGTCGCTTTGGTTTTGCTGCT-
TCTGATCGCCGCCTGTGTTCCT CDS-3'UTR)
ATCTTCACCCGCACCGAGCCTCGGCCAGCGCTCACAATCACCACCTCGCCCAACCTGGGTACCCGAGAGAATA-
ATGCAGACCAGGTCA
CCCCTGTTTCCCACATTGGCTGCCCCAACACTACACAACAGGGCTCTCCTGTGTTCGCCAAGCTACTGGCTA-
AAAACCAAGCATCGTT
GTGCAATACAACTCTGAACTGGCACAGCCAAGATGGAGCTGGGAGCTCATACCTATCTCAAGGTCTGAGGTA-
CGAAGAAGACAAAAAG
GAGTTGGTGGTAGACAGTCCCGGGCTCTACTACGTATTTTTGGAACTGAAGCTCAGTCCAACATTCACAAAC-
ACAGGCCACAAGGTGC
AGGGCTGGGTCTCTCTTGTTTTGCAAGCAAAGCCTCAGGTAGATGACTTTGACAACTTGGCCCTGACAGTGG-
AACTGTTCCCTTGCTC
CATGGAGAACAAGTTAGTGGACCGTTCCTGGAGTCAACTGTTGCTCCTGAAGGCTGGCCACCGCCTCAGTGT-
GGGTCTGAGGGCTTAT
CTGCATGGAGCCCAGGATGCATACAGAGACTGGGAGCTGTCTTATCCCAACACCACCAGCTTTGGACTCTTT-
CTTGTGAAACCCGACA
ACCCATGGGAATGATAGGGATCCGATCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGTCCTGG-
GTACCCCGAGTCTCCC
CCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGACACCT-
CCCAAGCACGCAGCAA
TGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATAAACGA-
AAGTTTAACTAAGCTA
TACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAGCATATG
ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
A 68 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGGACCAGCACACACUUGAU-
GUGGAGGAUACCGCG 41BBL (RNA)
GAUGCCAGACAUCCAGCAGGUACUUCGUGCCCCUCGGAUGCGGCGCUCCUCAGAGAUACCGGGCUCCUCGCGG-
ACGCUGCGCUCCUCU
CAGAUACUGUGCGCCCCACAAAUGCCGCGCUCCCCACGGAUGCUGCCUACCCUGCGGUUAAUGUUCGGGAUC-
GCGAGGCCGCGUGGCC
GCCUGCACUGAACUUCUGUUCCCGCCACCCAAAGCUCUAUGGCCUAGUCGCUUUGGUUUUGCUGCUUCUGAU-
CGCCGCCUGUGUUCCU
AUCUUCACCCGCACCGAGCCUCGGCCAGCGCUCACAAUCACCACCUCGCCCAACCUGGGUACCCGAGAGAAU-
AAUGCAGACCAGGUCA
CCCCUGUUUCCCACAUUGGCUGCCCCAACACUACACAACAGGGCUCUCCUGUGUUCGCCAAGCUACUGGCUA-
AAAACCAAGCAUCGUU
GUGCAAUACAACUCUGAACUGGCACAGCCAAGAUGGAGCUGGGAGCUCAUACCUAUCUCAAGGUCUGAGGUA-
CGAAGAAGACAAAAAG
GAGUUGGUGGUAGACAGUCCCGGGCUCUACUACGUAUUUUUGGAACUGAAGCUCAGUCCAACAUUCACAAAC-
ACAGGCCACAAGGUGC
AGGGCUGGGUCUCUCUUGUUUUGCAAGCAAAGCCUCAGGUAGAUGACUUUGACAACUUGGCCCUGACAGUGG-
AACUGUUCCCUUGCUC
CAUGGAGAACAAGUUAGUGGACCGUUCCUGGAGUCAACUGUUGCUCCUGAAGGCUGGCCACCGCCUCAGUGU-
GGGUCUGAGGGCUUAU
CUGCAUGGAGCCCAGGAUGCAUACAGAGACUGGGAGCUGUCUUAUCCCAACACCACCAGCUUUGGACUCUUU-
CUUGUGAAACCCGACA
ACCCAUGGGAAUGAUAGGGAUCCGAUCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGUCCUGG-
GUACCCCGAGUCUCCC
CCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGACACCU-
CCCAAGCACGCAGCAA
UGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGA-
AAGUUUAACUAAGCUA
UACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAGCAUAUG
ACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
A 69 ModB murine
MDQHTLDVEDTADARHPAGTSCPSDAALLRDTGLLADAALLSDTVRPTNAALPTDAAYPAVNVRDREAAWPPA-
LNFCSRHPKLYGLVA 41BBL
LVLLLLIAACVPIFTRTEPRPALTITTSPNLGTRENNADQVTPVSHIGCPNTTQQGSPVFAKLLAKN-
QASLCNTTLNWHSQDGAGSSY (amino
LSQGLRYEEDKKELVVDSPGLYYVFLELKLSPTFTNTGHKVQGWVSLVLQAKPQVDDFDNLALTVE-
LFPCSMENKLVDRSWSQLLLLK acid)
AGHRLSVGLRAYLHGAQDAYRDWELSYPNTTSFGLFLVKPDNPWE 70 ModB murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA 41BBL
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGACCAGC-
ACACACTTGATGTGGAGGATA (DNA:
CCGCGGATGCCAGACATCCAGCAGGTACTTCGTGCCCCTCGGATGCGGCGCTCCTCAGAGATACCGG-
GCTCCTCGCGGACGCTGCGCT 5'UTR-
CCTCTCAGATACTGTGCGCCCCACAAATGCCGCGCTCCCCACGGATGCTGCCTACCCTGCGGTTAA-
TGTTCGGGATCGCGAGGCCGCG CDS-3'UTR)
TGGCCGCCTGCACTGAACTTCTGTTCCCGCCACCCAAAGCTCTATGGCCTAGTCGCTTTGGTTTTGCTGCTTC-
TGATCGCCGCCTGTG
TTCCTATCTTCACCCGCACCGAGCCTCGGCCAGCGCTCACAATCACCACCTCGCCCAACCTGGGTACCCGAG-
AGAATAATGCAGACCA
GGTCACCCCTGTTTCCCACATTGGCTGCCCCAACACTACACAACAGGGCTCTCCTGTGTTCGCCAAGCTACT-
GGCTAAAAACCAAGCA
TCGTTGTGCAATACAACTCTGAACTGGCACAGCCAAGATGGAGCTGGGAGCTCATACCTATCTCAAGGTCTG-
AGGTACGAAGAAGACA
AAAAGGAGTTGGTGGTAGACAGTCCCGGGCTCTACTACGTATTTTTGGAACTGAAGCTCAGTCCAACATTCA-
CAAACACAGGCCACAA
GGTGCAGGGCTGGGTCTCTCTTGTTTTGCAAGCAAAGCCTCAGGTAGATGACTTTGACAACTTGGCCCTGAC-
AGTGGAACTGTTCCCT
TGCTCCATGGAGAACAAGTTAGTGGACCGTTCCTGGAGTCAACTGTTGCTCCTGAAGGCTGGCCACCGCCTC-
AGTGTGGGTCTGAGGG
CTTATCTGCATGGAGCCCAGGATGCATACAGAGACTGGGAGCTGTCTTATCCCAACACCACCAGCTTTGGAC-
TCTTTCTTGTGAAACC
CGACAACCCATGGGAATGATAGGGATCCGATCTGGTACTGCATGCACGCAATGCTAGCTGCCCCTTTCCCGT-
CCTGGGTACCCCGAGT
CTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCCCCACTCACCACCTCTGCTAGTTCCAGA-
CACCTCCCAAGCACGC
AGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAATA-
AACGAAAGTTTAACTA
AGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACCCTCGAGCTAGCAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAGC
ATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAA 71 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUDG-
CAGCAAUUUAAAUCA 41BBL (RNA)
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGACCAGCACACAC-
UUGAUGUGGAGGAUA
CCGCGGAUGCCAGACAUCCAGCAGGUACUUCGUGCCCCUCGGAUGCGGCGCUCCUCAGAGAUACCGGGCUCC-
UCGCGGACGCUGCGCU
CCUCUCAGAUACUGUGCGCCCCACAAAUGCCGCGCUCCCCACGGAUGCUGCCUACCCUGCGGUUAAUGUUCG-
GGAUCGCGAGGCCGCG
UGGCCGCCUGCACUGAACUUCUGUUCCCGCCACCCAAAGCUCUAUGGCCUAGUCGCUUUGGUUUUGCUGCUU-
CUGAUCGCCGCCUGUG
UUCCUAUCUUCACCCGCACCGAGCCUCGGCCAGCGCUCACAAUCACCACCUCGCCCAACCUGGGUACCCGAG-
AGAAUAAUGCAGACCA
GGUCACCCCUGUUUCCCACAUUGGCUGCCCCAACACUACACAACAGGGCUCUCCUGUGUUCGCCAAGCUACU-
GGCUAAAAACCAAGCA
UCGUUGUGCAAUACAACUCUGAACUGGCACAGCCAAGAUGGAGCUGGGAGCUCAUACCUAUCUCAAGGUCUG-
AGGUACGAAGAAGACA
AAAAGGAGUUGGUGGUAGACAGUCCCGGGCUCUACUACGUAUUUUUGGAACUGAAGCUCAGUCCAACAUUCA-
CAAACACAGGCCACAA
GGUGCAGGGCUGGGUCUCUCUUGUUUUGCAAGCAAAGCCUCAGGUAGAUGACUUUGACAACUUGGCCCUGAC-
AGUGGAACUGUUCCCU
UGCUCCAUGGAGAACAAGUUAGUGGACCGUUCCUGGAGUCAACUGUUGCUCCUGAAGGCUGGCCACCGCCUC-
AGUGUGGGUCUGAGGG
CUUAUCUGCAUGGAGCCCAGGAUGCAUACAGAGACUGGGAGCUGUCUUAUCCCAACACCACCAGCUUUGGAC-
UCUUUCUUGUGAAACC
CGACAACCCAUGGGAAUGAUAGGGAUCCGAUCUGGUACUGCAUGCACGCAAUGCUAGCUGCCCCUUUCCCGU-
CCUGGGUACCCCGAGU
CUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCCCCACUCACCACCUCUGCUAGUUCCAGA-
CACCUCCCAAGCACGC
AGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAACCUUUAGCAAUA-
AACGAAAGUUUAACUA
AGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACCCUCGAGCUAGCAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAGC
AUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAA CD27L-CD40L mouse 72 ModA murine
MRVTAPRTLILLLSGALALTETWAGSGSHPEPHTAELQLNLTVPRKDPTLRWGAGPALGRSFTHGPELEEGHL-
RIHQDGLYRLHIQVT CD27L-CD40L
LANCSSPGSTLQHRATLAVGICSPAAHGISLLRGRFGQDCTVALQRLTYLVHGDVLCTNLTLPLLPSRNADET-
FFGVQWICPGGGSGG (amino
GHPEPHTAELQLNLTVPRKDPTLRWGAGPALGRSFTHGPELEEGHLRIHQDGLYRLHIQVTLANCS-
SPGSTLQHRATLAVGICSPAAH acid)
GISLLRGRFGQDCTVALQRLTYLVHGDVLCTNLTLPLLPSRNADETFFGVQWICPGGGSGGGHPEPH-
TAELQLNLTVPRKDPTLRWGA Sequence
GPALGRSFTHGPELEEGHLRIHQDGLYRLHIQVTLANCSSPGSTLQHRATLAVGICSPAAHGIS-
LLRGRFGQDCTVALQRLTYLVHGD annotations
VLCTNLTLPLLPSRNADETFEGVQWICPGGGGSGGGGSGGGGSGDEDPQIAAHVVSEANSNAASVLQWAKKGY-
YTMKSNLVMLENGKQ CAPS:
LTVKREGLYYVYTQVTFCSNREPSSQRPFIVGLWLKPSSGSERILLKAANTHSSSQLCEQQSVHLGG-
VFELQAGASVFVNVTEASQVI CD27L;
HRVGFSSFGLLKLGGGSGGGGDEDPQIAAHVVSEANSNAASVLQWAKKGYYTMKSNLVMLENGKQL-
TVKREGLYYVYTQVTFCSNREP CAPS:
SSQRPFIVGLWLKPSSGSERILLKAANTHSSSQLCEQQSVHLGGVFELQAGASVFVNVTEASQVIHR-
VGFSSFGLLKLGGGSGGGGDE linker;
DPQIAAHVVSEANSNAASVLQWAKKGYYTMKSNLVMLENGKQLTVKREGLYYVYTQVTFCSNREP-
SSQRPFIVGLWLKPSSGSERILL CAPS: CD40L
KAANTHSSSQLCEQQSVHLGGVFELQAGASVFVNVTEASQVIHRVGFSSFGLLKL 73 ModA
murine
GGGCGAACTAGTATTCTTCTGGTCCCCACAGACTCAGAGAGAACCCGCCACCATGAGAGTGACCGCCCCCAGA-
ACCCTGATCCTGCTG CD27L-CD40L
CTGTCTGGCGCCCTGGCCCTGACAGAGACATGGGCCGGAAGCGGATCCCACCCCGAGCCCCACACCGCCGAAC-
TGCAGCTGAACCTGA (DNA:
CCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGCAGATCCTTTACACA-
CGGCCCCGAGCTGGAAGAAGG 5'UTR-
CCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCCTGGCCAACTGCAG-
CAGCCCTGGCTCTACCCTGCAG CDS-3'UTR)
CACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAGCCTGCTGAGAGGCAGATTCG-
GCCAGGACTGTACCG
TGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAACCTGACACTGCCTCTGCTGC-
CCAGCAGAAACGCCGA
CGAAACATTCTTTGGAGTGCAGTGGATTTGTCCTGGCGGAGGGTCCGGGGGAGGACACCCAGAACCTCATAC-
AGCTGAACTGCAGCTG
AACCTGACCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGCAGATCCTTTACA-
CACGGCCCCGAGCTGG
AAGAAGGCCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCCTGGCCAACTGCA-
GCAGCCCTGGCTCTAC
CCTGCAGCACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAGCCTGCTGAGAGG-
CAGATTCGGCCAGGAC
TGTACCGTGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAACCTGACACTGCCT-
CTGCTGCCCAGCAGAA
ACGCCGACGAAACATTCTTTGGAGTGCAGTGGATTTGTCCTGGGGGAGGCTCCGGAGGCGGACACCCTGAAC-
CTCATACAGCTGAACT
GCAGCTGAACCTGACCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGCAGATC-
CTTTACACACGGCCCC
GAGCTGGAAGAAGGCCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCCTGGCC-
AACTGCAGCAGCCCTG
GCTCTACCCTGCAGCACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAGCCTGC-
TGAGAGGCAGATTCGG
CCAGGACTGTACCGTGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAACCTGAC-
ACTGCCTCTGCTGCCC
AGCAGAAACGCCGACGAGACCTTCTTCGGCGTCCAGTGGATCTGCCCCGGAGGCGGTGGTAGTGGAGGTGGC-
GGGTCCGGTGGAGGTG
GAAGCGGCGACGAGGACCCCCAGATCGCCGCCCACGTGGTGTCTGAGGCCAACAGCAACGCCGCCTCTGTGC-
TGCAGTGGGCCAAGAA
AGGCTACTACACCATGAAGTCCAACCTCGTGATGCTGGAAAACGGCAAGCAGCTGACCGTGAAGCGCGAGGG-
CCTGTACTATGTGTAC
ACCCAAGTGACATTCTGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCTTTTATCGTGGGCCTGTGGCTGAAG-
CCTAGCAGCGGCAGCG
AGAGAATCCTGCTGAAGGCCGCCAACACCCACAGCAGCTCTCAGCTGTGCGAGCAGCAGTCTGTGCACCTGG-
GAGGCGTGTTCGAGCT
GCAAGCTGGCGCTTCCGTGTTCGTGAACGTGACCGAGGCCAGCCAAGTGATCCACAGAGTGGGCTTCAGCAG-
CTTTGGACTGCTCAAA
CTGGGCGGAGGGTCCGGCGGAGGCGGAGATGAAGATCCTCAGATTGCTGCCCACGTGGTGTCTGAGGCCAAC-
AGCAACGCCGCCTCTG
TGCTGCAGTGGGCCAAGAAAGGCTACTACACCATGAAGTCCAACCTCGTGATGCTGGAAAACGGCAAGCAGC-
TGACCGTGAAGCGCGA
GGGCCTGTACTATGTGTACACCCAAGTGACATTCTGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCTTTTAT-
CGTGGGCCTGTGGCTG
AAGCCTAGCAGCGGCAGCGAGAGAATCCTGCTGAAGGCCGCCAACACCCACAGCAGCTCTCAGCTGTGCGAG-
CAGCAGTCTGTGCACC
TGGGAGGCGTGTTCGAGCTGCAAGCTGGCGCTTCCGTGTTCGTGAACGTGACCGAGGCCAGCCAAGTGATCC-
ACAGAGTGGGCTTCAG
CAGCTTTGGACTGCTCAAACTGGGAGGCGGCTCCGGAGGCGGAGGAGATGAAGATCCTCAGATTGCTGCCCA-
CGTGGTGTCTGAGGCC
AACAGCAACGCCGCCTCTGTGCTGCAGTGGGCCAAGAAAGGCTACTACACCATGAAGTCCAACCTCGTGATG-
CTGGAAAACGGCAAGC
AGCTGACCGTGAAGCGCGAGGGCCTGTACTATGTGTACACCCAAGTGACATTCTGCAGCAACCGCGAGCCCA-
GCAGCCAGAGGCCTTT
TATCGTGGGCCTGTGGCTGAAGCCTAGCAGCGGCAGCGAGAGAATCCTGCTGAAGGCCGCCAACACCCACAG-
CAGCTCTCAGCTGTGC
GAGCAGCAGTCTGTGCACCTGGGAGGCGTGTTCGAGCTGCAAGCTGGCGCTTCCGTGTTCGTGAACGTGACC-
GAGGCCAGCCAAGTGA
TCCACAGAGTGGGCTTCTCCTCCTTCGGCCTCCTGAAGCTGTGACTCGAGAGCTCGCTTTCTTGCTGTCCAA-
TTTCTATTAAAGGTTC
CTTTGTTCCCTAAGTCCAACTACTAAACTGGGGGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAA-
TAAAAAACATTTATTT
TCATTGCTGCGTCGAGAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAGTCCA-
ACTACTAAACTGGGGG
ATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATAAAAAACATTTATTTTCATTGCTGCGTCGAGAC-
CTGGTCCAGAGTCGCT
AGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA 74 ModA murine
GGGCGAACUAGUAUUCUUCUGGUCCCCACAGACUCAGAGAGAACCCGCCACCAUGAGAGUGACCGCCCCCAGA-
ACCCUGAUCCUGCUG CD27L-CD40L
CUGUCUGGCGCCCUGGCCCUGACAGAGACAUGGGCCGGAAGCGGAUCCCACCCCGAGCCCCACACCGCCGAAC-
UGCAGCUGAACCUGA (RNA)
CCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGCAGAUCCUUUACACA-
CGGCCCCGAGCUGGAAGAAGG
CCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCCUGGCCAACUGCAGCAGCCC-
UGGCUCUACCCUGCAG
CACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAGCCUGCUGAGAGGCAGAUUC-
GGCCAGGACUGUACCG
UGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAACCUGACACUGCCUCUGCUGC-
CCAGCAGAAACGCCGA
CGAAACAUUCUUUGGAGUGCAGUGGAUUUGUCCUGGCGGAGGGUCCGGGGGAGGACACCCAGAACCUCAUAC-
AGCUGAACUGCAGCUG
AACCUGACCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGCAGAUCCUUUACA-
CACGGCCCCGAGCUGG
AAGAAGGCCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCCUGGCCAACUGCA-
GCAGCCCUGGCUCUAC
CCUGCAGCACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAGCCUGCUGAGAGG-
CAGAUUCGGCCAGGAC
UGUACCGUGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAACCUGACACUGCCU-
CUGCUGCCCAGCAGAA
ACGCCGACGAAACAUUCUUUGGAGUGCAGUGGAUUUGUCCUGGGGGAGGCUCCGGAGGCGGACACCCUGAAC-
CUCAUACAGCUGAACU
GCAGCUGAACCUGACCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGCAGAUC-
CUUUACACACGGCCCC
GAGCUGGAAGAAGGCCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCCUGGCC-
AACUGCAGCAGCCCUG
GCUCUACCCUGCAGCACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAGCCUGC-
UGAGAGGCAGAUUCGG
CCAGGACUGUACCGUGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAACCUGAC-
ACUGCCUCUGCUGCCC
AGCAGAAACGCCGACGAGACCUUCUUCGGCGUCCAGUGGAUCUGCCCCGGAGGCGGUGGUAGUGGAGGUGGC-
GGGUCCGGUGGAGGUG
GAAGCGGCGACGAGGACCCCCAGAUCGCCGCCCACGUGGUGUCUGAGGCCAACAGCAACGCCGCCUCUGUGC-
UGCAGUGGGCCAAGAA
AGGCUACUACACCAUGAAGUCCAACCUCGUGAUGCUGGAAAACGGCAAGCAGCUGACCGUGAAGCGCGAGGG-
CCUGUACUAUGUGUAC
ACCCAAGUGACAUUCUGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCUUUUAUCGUGGGCCUGUGGCUGAAG-
CCUAGCAGCGGCAGCG
AGAGAAUCCUGCUGAAGGCCGCCAACACCCACAGCAGCUCUCAGCUGUGCGAGCAGCAGUCUGUGCACCUGG-
GAGGCGUGUUCGAGCU
GCAAGCUGGCGCUUCCGUGUUCGUGAACGUGACCGAGGCCAGCCAAGUGAUCCACAGAGUGGGCUUCAGCAG-
CUUUGGACUGCUCAAA
CUGGGCGGAGGGUCCGGCGGAGGCGGAGAUGAAGAUCCUCAGAUUGCUGCCCACGUGGUGUCUGAGGCCAAC-
AGCAACGCCGCCUCUG
UGCUGCAGUGGGCCAAGAAAGGCUACUACACCAUGAAGUCCAACCUCGUGAUGCUGGAAAACGGCAAGCAGC-
UGACCGUGAAGCGCGA
GGGCCUGUACUAUGUGUACACCCAAGUGACAUUCUGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCUUUUAU-
CGUGGGCCUGUGGCUG
AAGCCUAGCAGCGGCAGCGAGAGAAUCCUGCUGAAGGCCGCCAACACCCACAGCAGCUCUCAGCUGUGCGAG-
CAGCAGUCUGUGCACC
UGGGAGGCGUGUUCGAGCUGCAAGCUGGCGCUUCCGUGUUCGUGAACGUGACCGAGGCCAGCCAAGUGAUCC-
ACAGAGUGGGCUUCAG
CAGCUUUGGACUGCUCAAACUGGGAGGCGGCUCCGGAGGCGGAGGAGAUGAAGAUCCUCAGAUUGCUGCCCA-
CGUGGUGUCUGAGGCC
AACAGCAACGCCGCCUCUGUGCUGCAGUGGGCCAAGAAAGGCUACUACACCAUGAAGUCCAACCUCGUGAUG-
CUGGAAAACGGCAAGC
AGCUGACCGUGAAGCGCGAGGGCCUGUACUAUGUGUACACCCAAGUGACAUUCUGCAGCAACCGCGAGCCCA-
GCAGCCAGAGGCCUUU
UAUCGUGGGCCUGUGGCUGAAGCCUAGCAGCGGCAGCGAGAGAAUCCUGCUGAAGGCCGCCAACACCCACAG-
CAGCUCUCAGCUGUGC
GAGCAGCAGUCUGUGCACCUGGGAGGCGUGUUCGAGCUGCAAGCUGGCGCUUCCGUGUUCGUGAACGUGACC-
GAGGCCAGCCAAGUGA
UCCACAGAGUGGGCUUCUCCUCCUUCGGCCUCCUGAAGCUGUGACUCGAGAGCUCGCUUUCUUGCUGUCCAA-
UUUCUAUUAAAGGUUC
CUUUGUUCCCUAAGUCCAACUACUAAACUGGGGGAUAUUAUGAAGGGCCUUGAGCAUCUGGAUUCUGCCUAA-
UAAAAAACAUUUAUUU
UCAUUGCUGCGUCGAGAGCUCGCUUUCUUGCUGUCCAAUUUCUAUUAAAGGUUCCUUUGUUCCCUAAGUCCA-
ACUACUAAACUGGGGG
AUAUUAUGAAGGGCCUUGAGCAUCUGGAUUCUGCCUAAUAAAAAACAUUUAUUUUCAUUGCUGCGUCGAGAC-
CUGGUCCAGAGUCGCU
AGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA 75 ModB murine
MGAMAPRTLLLLLAAALAPTQTRAGPGSHPEPHTAELQLNLTVPRKDPTLRWGAGPALGRSFTHGPELEEGHL-
RIHQDGLYRLHIQVT CD27L-CD40L
LANCSSPGSTLQHRATLAVGICSPAAHGISLLRGRFGQDCTVALQRLTYLVHGDVLCTNLTLPLLPSRNADET-
FFGVQWICPGGGSGG (amino
GHPEPHTAELQLNLTVPRKDPTLRWGAGPALGRSFTHGPELEEGHLRIHQDGLYRLHIQVTLANCS-
SPGSTLQHRATLAVGICSPAAH acid)
GISLLRGRFGQDCTVALQRLTYLVHGDVLCTNLTLPLLPSRNADETFFGVQWICPGGGSGGGHPEPH-
TAELQLNLTVPRKDPTLRWGA
GPALGRSFTHGPELEEGHLRIHQDGLYRLHIQVTLANCSSPGSTLQHRATLAVGICSPAAHGISLLRGRFGQ-
DCTVALQRLTYLVHGD
VLCTNLTLPLLPSRNADETFFGVQWICPGGGGSGGGGSGGGGSGDEDPQIAAHVVSEANSNAASVLQWAKKG-
YYTMKSNLVMLENGKQ
LTVKREGLYYVYTQVTFCSNREPSSQRPFIVGLWLKPSSGSERILLKAANTHSSSQLCEQQSVHLGGVFELQ-
AGASVFVNVTEASQVI
HRVGFSSFGLLKLGGGSGGGGDEDPQIAAHVVSEANSNAASVLQWAKKGYYTMKSNLVMLENGKQLTVKREG-
LYYVYTQVTFCSNREP
SSQRPFIVGLWLKPSSGSERILLKAANTHSSSQLCEQQSVHLGGVFELQAGASVFVNVTEASQVIHRVGFSS-
FGLLKLGGGSGGGGDE
DPQIAAHVVSEANSNAASVLQWAKKGYYTMKSNLVMLENGKQLTVKREGLYYVYTQVTFCSNREPSSQRPFI-
VGLWLKPSSGSERILL
KAANTHSSSQLCEQQSVHLGGVFELQAGASVFVNVTEASQVIHRVGFSSFGLLKL 76 ModB
murine
GGAATAAACTAGTCTCAACACAACATATACAAAACAAACGAATCTCAAGCAATCAAGCATTCTACTTCTATTG-
CAGCAATTTAAATCA CD27L-CD40L
TTTCTTTTAAAGCAAAAGCAATTTTCTGAAAATTTTCACCATTTACGAACGATAGCCATGGGCGCCATGGCCC-
CTAGAACATTGCTCC (DNA:
TGCTGCTGGCCGCTGCCCTGGCCCCTACACAGACAAGAGCTGGACCTGGATCCCACCCCGAGCCCCA-
CACCGCCGAACTGCAGCTGAA 5'UTR-
CCTGACCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGCAGATCCTT-
TACACACGGCCCCGAGCTGGAA CDS-3'UTR)
GAAGGCCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCCTGGCCAACTGCAGCA-
GCCCTGGCTCTACCC
TGCAGCACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAGCCTGCTGAGAGGCA-
GATTCGGCCAGGACTG
TACCGTGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAACCTGACACTGCCTCT-
GCTGCCCAGCAGAAAC
GCCGACGAAACATTCTTTGGAGTGCAGTGGATTTGTCCTGGCGGAGGGTCCGGGGGAGGACACCCAGAACCT-
CATACAGCTGAACTGC
AGCTGAACCTGACCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGCAGATCCT-
TTACACACGGCCCCGA
GCTGGAAGAAGGCCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCCTGGCCAA-
CTGCAGCAGCCCTGGC
TCTACCCTGCAGCACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAGCCTGCTG-
AGAGGCAGATTCGGCC
AGGACTGTACCGTGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAACCTGACAC-
TGCCTCTGCTGCCCAG
CAGAAACGCCGACGAAACATTCTTTGGAGTGCAGTGGATTTGTCCTGGGGGAGGCTCCGGAGGCGGACACCC-
TGAACCTCATACAGCT
GAACTGCAGCTGAACCTGACCGTGCCCAGAAAGGACCCCACCCTGAGATGGGGAGCTGGCCCTGCTCTGGGC-
AGATCCTTTACACACG
GCCCCGAGCTGGAAGAAGGCCACCTGAGAATCCACCAGGACGGCCTGTACAGACTGCACATCCAAGTGACCC-
TGGCCAACTGCAGCAG
CCCTGGCTCTACCCTGCAGCACAGAGCCACACTGGCCGTGGGCATCTGTAGCCCTGCTGCTCACGGAATCAG-
CCTGCTGAGAGGCAGA
TTCGGCCAGGACTGTACCGTGGCCCTGCAGAGGCTGACCTATCTGGTGCATGGCGACGTGCTGTGCACCAAC-
CTGACACTGCCTCTGC
TGCCCAGCAGAAACGCCGACGAGACCTTCTTCGGCGTCCAGTGGATCTGCCCCGGAGGCGGTGGTAGTGGAG-
GTGGCGGGTCCGGTGG
AGGTGGAAGCGGCGACGAGGACCCCCAGATCGCCGCCCACGTGGTGTCTGAGGCCAACAGCAACGCCGCCTC-
TGTGCTGCAGTGGGCC
AAGAAAGGCTACTACACCATGAAGTCCAACCTCGTGATGCTGGAAAACGGCAAGCAGCTGACCGTGAAGCGC-
GAGGGCCTGTACTATG
TGTACACCCAAGTGACATTCTGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCTTTTATCGTGGGCCTGTGGC-
TGAAGCCTAGCAGCGG
CAGCGAGAGAATCCTGCTGAAGGCCGCCAACACCCACAGCAGCTCTCAGCTGTGCGAGCAGCAGTCTGTGCA-
CCTGGGAGGCGTGTTC
GAGCTGCAAGCTGGCGCTTCCGTGTTCGTGAACGTGACCGAGGCCAGCCAAGTGATCCACAGAGTGGGCTTC-
AGCAGCTTTGGACTGC
TCAAACTGGGCGGAGGGTCCGGCGGAGGCGGAGATGAAGATCCTCAGATTGCTGCCCACGTGGTGTCTGAGG-
CCAACAGCAACGCCGC
CTCTGTGCTGCAGTGGGCCAAGAAAGGCTACTACACCATGAAGTCCAACCTCGTGATGCTGGAAAACGGCAA-
GCAGCTGACCGTGAAG
CGCGAGGGCCTGTACTATGTGTACACCCAAGTGACATTCTGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCT-
TTTATCGTGGGCCTGT
GGCTGAAGCCTAGCAGCGGCAGCGAGAGAATCCTGCTGAAGGCCGCCAACACCCACAGCAGCTCTCAGCTGT-
GCGAGCAGCAGTCTGT
GCACCTGGGAGGCGTGTTCGAGCTGCAAGCTGGCGCTTCCGTGTTCGTGAACGTGACCGAGGCCAGCCAAGT-
GATCCACAGAGTGGGC
TTCAGCAGCTTTGGACTGCTCAAACTGGGAGGCGGCTCCGGAGGCGGAGGAGATGAAGATCCTCAGATTGCT-
GCCCACGTGGTGTCTG
AGGCCAACAGCAACGCCGCCTCTGTGCTGCAGTGGGCCAAGAAAGGCTACTACACCATGAAGTCCAACCTCG-
TGATGCTGGAAAACGG
CAAGCAGCTGACCGTGAAGCGCGAGGGCCTGTACTATGTGTACACCCAAGTGACATTCTGCAGCAACCGCGA-
GCCCAGCAGCCAGAGG
CCTTTTATCGTGGGCCTGTGGCTGAAGCCTAGCAGCGGCAGCGAGAGAATCCTGCTGAAGGCCGCCAACACC-
CACAGCAGCTCTCAGC
TGTGCGAGCAGCAGTCTGTGCACCTGGGAGGCGTGTTCGAGCTGCAAGCTGGCGCTTCCGTGTTCGTGAACG-
TGACCGAGGCCAGCCA
AGTGATCCACAGAGTGGGCTTCTCCTCCTTCGGCCTCCTGAAGCTGTGACTCGACGTCCTGGTACTGCATGC-
ACGCAATGCTAGCTGC
CCCTTTCCCGTCCTGGGTACCCCGAGTCTCCCCCGACCTCGGGTCCCAGGTATGCTCCCACCTCCACCTGCC-
CCACTCACCACCTCTG
CTAGTTCCAGACACCTCCCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGA-
AACAGCAGTGATTAAC
CTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACACC-
CTCGAGCTAGCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAGCATATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA 77 ModB murine
GGAAUAAACUAGUCUCAACACAACAUAUACAAAACAAACGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUG-
CAGCAAUUUAAAUCA CD27L-CD40L
UUUCUUUUAAAGCAAAAGCAAUUUUCUGAAAAUUUUCACCAUUUACGAACGAUAGCCAUGGGCGCCAUGGCCC-
CUAGAACAUUGCUCC (RNA)
UGCUGCUGGCCGCUGCCCUGGCCCCUACACAGACAAGAGCUGGACCUGGAUCCCACCCCGAGCCCCA-
CACCGCCGAACUGCAGCUGAA
CCUGACCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGCAGAUCCUUUACACA-
CGGCCCCGAGCUGGAA
GAAGGCCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCCUGGCCAACUGCAGC-
AGCCCUGGCUCUACCC
UGCAGCACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAGCCUGCUGAGAGGCA-
GAUUCGGCCAGGACUG
UACCGUGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAACCUGACACUGCCUCU-
GCUGCCCAGCAGAAAC
GCCGACGAAACAUUCUUUGGAGUGCAGUGGAUUUGUCCUGGCGGAGGGUCCGGGGGAGGACACCCAGAACCU-
CAUACAGCUGAACUGC
AGCUGAACCUGACCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGCAGAUCCU-
UUACACACGGCCCCGA
GCUGGAAGAAGGCCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCCUGGCCAA-
CUGCAGCAGCCCUGGC
UCUACCCUGCAGCACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAGCCUGCUG-
AGAGGCAGAUUCGGCC
AGGACUGUACCGUGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAACCUGACAC-
UGCCUCUGCUGCCCAG
CAGAAACGCCGACGAAACAUUCUUUGGAGUGCAGUGGAUUUGUCCUGGGGGAGGCUCCGGAGGCGGACACCC-
UGAACCUCAUACAGCU
GAACUGCAGCUGAACCUGACCGUGCCCAGAAAGGACCCCACCCUGAGAUGGGGAGCUGGCCCUGCUCUGGGC-
AGAUCCUUUACACACG
GCCCCGAGCUGGAAGAAGGCCACCUGAGAAUCCACCAGGACGGCCUGUACAGACUGCACAUCCAAGUGACCC-
UGGCCAACUGCAGCAG
CCCUGGCUCUACCCUGCAGCACAGAGCCACACUGGCCGUGGGCAUCUGUAGCCCUGCUGCUCACGGAAUCAG-
CCUGCUGAGAGGCAGA
UUCGGCCAGGACUGUACCGUGGCCCUGCAGAGGCUGACCUAUCUGGUGCAUGGCGACGUGCUGUGCACCAAC-
CUGACACUGCCUCUGC
UGCCCAGCAGAAACGCCGACGAGACCUUCUUCGGCGUCCAGUGGAUCUGCCCCGGAGGCGGUGGUAGUGGAG-
GUGGCGGGUCCGGUGG
AGGUGGAAGCGGCGACGAGGACCCCCAGAUCGCCGCCCACGUGGUGUCUGAGGCCAACAGCAACGCCGCCUC-
UGUGCUGCAGUGGGCC
AAGAAAGGCUACUACACCAUGAAGUCCAACCUCGUGAUGCUGGAAAACGGCAAGCAGCUGACCGUGAAGCGC-
GAGGGCCUGUACUAUG
UGUACACCCAAGUGACAUUCUGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCUUUUAUCGUGGGCCUGUGGC-
UGAAGCCUAGCAGCGG
CAGCGAGAGAAUCCUGCUGAAGGCCGCCAACACCCACAGCAGCUCUCAGCUGUGCGAGCAGCAGUCUGUGCA-
CCUGGGAGGCGUGUUC
GAGCUGCAAGCUGGCGCUUCCGUGUUCGUGAACGUGACCGAGGCCAGCCAAGUGAUCCACAGAGUGGGCUUC-
AGCAGCUUUGGACUGC
UCAAACUGGGCGGAGGGUCCGGCGGAGGCGGAGAUGAAGAUCCUCAGAUUGCUGCCCACGUGGUGUCUGAGG-
CCAACAGCAACGCCGC
CUCUGUGCUGCAGUGGGCCAAGAAAGGCUACUACACCAUGAAGUCCAACCUCGUGAUGCUGGAAAACGGCAA-
GCAGCUGACCGUGAAG
CGCGAGGGCCUGUACUAUGUGUACACCCAAGUGACAUUCUGCAGCAACCGCGAGCCCAGCAGCCAGAGGCCU-
UUUAUCGUGGGCCUGU
GGCUGAAGCCUAGCAGCGGCAGCGAGAGAAUCCUGCUGAAGGCCGCCAACACCCACAGCAGCUCUCAGCUGU-
GCGAGCAGCAGUCUGU
GCACCUGGGAGGCGUGUUCGAGCUGCAAGCUGGCGCUUCCGUGUUCGUGAACGUGACCGAGGCCAGCCAAGU-
GAUCCACAGAGUGGGC
UUCAGCAGCUUUGGACUGCUCAAACUGGGAGGCGGCUCCGGAGGCGGAGGAGAUGAAGAUCCUCAGAUUGCU-
GCCCACGUGGUGUCUG
AGGCCAACAGCAACGCCGCCUCUGUGCUGCAGUGGGCCAAGAAAGGCUACUACACCAUGAAGUCCAACCUCG-
UGAUGCUGGAAAACGG
CAAGCAGCUGACCGUGAAGCGCGAGGGCCUGUACUAUGUGUACACCCAAGUGACAUUCUGCAGCAACCGCGA-
GCCCAGCAGCCAGAGG
CCUUUUAUCGUGGGCCUGUGGCUGAAGCCUAGCAGCGGCAGCGAGAGAAUCCUGCUGAAGGCCGCCAACACC-
CACAGCAGCUCUCAGC
UGUGCGAGCAGCAGUCUGUGCACCUGGGAGGCGUGUUCGAGCUGCAAGCUGGCGCUUCCGUGUUCGUGAACG-
UGACCGAGGCCAGCCA
AGUGAUCCACAGAGUGGGCUUCUCCUCCUUCGGCCUCCUGAAGCUGUGACUCGACGUCCUGGUACUGCAUGC-
ACGCAAUGCUAGCUGC
CCCUUUCCCGUCCUGGGUACCCCGAGUCUCCCCCGACCUCGGGUCCCAGGUAUGCUCCCACCUCCACCUGCC-
CCACUCACCACCUCUG
CUAGUUCCAGACACCUCCCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGA-
AACAGCAGUGAUUAAC
CUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACACC-
CUCGAGCUAGCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA Other sequences of the invention
78 Poly-A
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAAAAAAAAAAAAAA-
AAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA 79 Anti-PD1
EVQLLESGGV LVQPGGSLRL SCAASGFTFS NFGMTWVRQA PGKGLEWVSG ISGGGRDTYF
ADSVKGRFTI SRDNSKNTLY Mab heavy LQMNSLKGED TAVYYCVKWG NIYFDYWGQG
TLVTVSSAST KGPSVFPLAP CSRSTSESTA ALGCLVKDYF PEPVTVSWNS chain
GALTSGVHTF PAVLQSSGLY SLSSVVTVPS SSLGTKTYTC NVDHKPSNTK VDKRVESKYG
PPCPPCPAPE FLGGPSVFLF PPKPKDTLMI SRTPEVTCVV VDVSQEDPEV QFNWYVDGVE
VHNAKTKPRE EQFNSTYRVV SVLTVLHQDW LNGKEYKCKV SNKGLPSSIE KTISKAKGQP
REPQVYTLPP SQEEMTKNQV SLTCLVKGFY PSDIAVEWES NGQPENNYKT TPPVLDSDGS
FFLYSRLTVD KSRWQEGNVF SCSVMHEALH NHYTQKSLSL SLGK 80 Anti-PD1
DIQMTQSPSS LSASVGDSIT ITCRASLSIN TFLNWYQQKP GKAPNLLIYA ASSLHGGVPS
RFSGSGSGTD FTLTIRTLQP Mab light EDFATYYCQQ SSNTPFTFGP GTVVDFRRTV
AAPSVFIFPP SDEQLKSGTA SVVCLLNNFY PREAKVQWKV DNALQSGNSQ chain
ESVTEQDSKD STYSLSSTLT LSKADYEKHK VYACEVTHQG LSSPVTKSFN RGEC 81
HCDR1 GFTFSNFG 82 HCDR2 ISGGGRDT 83 HCDR3 VKWGNIYFDY 84 LCDR1
LSINTF 85 LCDR2 AAS 86 LCDR3 QQSSNTPFT 87 Anti-PD1 EVQLLESGGV
LVQPGGSLRL SCAASGFTFS NFGMTWVRQA PGKGLEWVSG ISGGGRDTYF ADSVKGRFTI
SRDNSKNTLY Mab VH LQMNSLKGED TAVYYCVKWG NIYFDYWGQG TLVTVSS 88
Anti-PD1 DIQMTQSPSS LSASVGDSIT ITCRASLSIN TFLNWYQQKP GKAPNLLIYA
ASSLHGGVPS RFSGSGSGTD FTLTIRTLQP Mab VL EDFATYYCQQ SSNTPFTFGP
GTVVDFR
DETAILED DESCRIPTION
I. Definitions
[0595] The term "ModB" describes RNA comprising a modified
nucleobase in place of at least one (e.g., every) uridine and
further comprising a Cap1 structure at the 5' end of the RNA. In
some embodiments, the 5' UTR of a ModB RNA comprises SEQ ID NOs: 4
or 6. ModB RNA has been processed to reduce double-stranded RNA
(dsRNA). The "Cap1" structure may be generated after in-vitro
translation by enzymatic capping or during in-vitro translation
(co-transcriptional capping).
[0596] In some embodiments, the building block cap for ModB
modified RNA is as follows, which is used when co-transcriptionally
capping:
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG (also sometimes
referred to as m.sub.2.sup.7,3'OG(5')ppp(5')m.sup.2'-OApG), which
has the following structure:
##STR00001##
[0597] Below is an exemplary Cap1 RNA after co-transcriptional
capping, which comprises RNA and
m.sub.2.sup.7,3'OG(5')ppp(5')m.sup.2'-OApG:
##STR00002##
[0598] Below is another exemplary Cap1 RNA after enzymatic capping
(no cap analog):
##STR00003##
[0599] The term "ModA" describes RNA without dsRNA reduction that
does not comprise a modified nucleobase in place of at least one
uridine. ModA RNA comprises a Cap0 structure at the 5' end of the
RNA. The 5' UTR of a ModA RNA may comprise SEQ ID NO: 2. "Cap0"
structures are generated during in-vitro translation
(co-transcriptional capping) using, in one embodiment, the cap
analog anti-reverse cap (ARCA Cap (m.sub.2.sup.7,3'OG(5')ppp(5')G))
with the structure:
##STR00004##
[0600] Below is an exemplary Cap0 RNA comprising RNA and
m.sub.2.sup.7,3'OG(5')ppp(5')G:
##STR00005##
[0601] In some embodiments, the "Cap0" structures are generated
during in-vitro translation (co-transcriptional capping) using the
cap analog Beta-S-ARCA (m.sub.2.sup.7,2'OG(5')ppSp(5')G) with the
structure:
##STR00006##
[0602] Below is an exemplary Cap0 RNA comprising Beta-S-ARCA
(m.sub.2.sup.7,2'OG(5')ppSp(5')G) and RNA.
##STR00007##
[0603] The term "uracil," as used herein, describes one of the
nucleobases that can occur in the nucleic acid of RNA. The
structure of uracil is:
##STR00008##
[0604] The term "uridine," as used herein, describes one of the
nucleosides that can occur in RNA. The structure of uridine is:
##STR00009##
[0605] UTP (uridine 5'-triphosphate) has the following
structure:
##STR00010##
[0606] Pseudo-UTP (pseudouridine 5'-triphosphate) has the following
structure:
##STR00011##
[0607] "Pseudouridine" is one example of a modified nucleoside that
is an isomer of uridine, where the uracil is attached to the
pentose ring via a carbon-carbon bond instead of a nitrogen-carbon
glycosidic bond. Pseudouridine is described, for example, in
Charette and Gray, Life; 49:341-351 (2000).
[0608] Another exemplary modified nucleoside is
N1-methylpseudouridine (m1.PSI.), which has the structure:
##STR00012##
[0609] N1-Methylpseudo-UTP has the following structure:
##STR00013##
[0610] As used herein, the term "poly-A tail" or "poly-A sequence"
refers to an uninterrupted or interrupted sequence of adenylate
residues which is typically located at the 3' end of an RNA
molecule. Poly-A tails or poly-A sequences are known to those of
skill in the art, and may follow the 3' UTR in the RNAs described
herein. An uninterrupted poly-A tail is characterized by
consecutive adenylate residues. In nature, an uninterrupted poly-A
tail is typical. RNAs disclosed herein can have a poly-A tail
attached to the free 3' end of the RNA by a template-independent
RNA polymerase after transcription or a poly-A tail encoded by DNA
and transcribed by a template-dependent RNA polymerase.
[0611] It has been demonstrated that a poly-A tail of about 120 A
nucleotides has a beneficial influence on the levels of RNA in
transfected eukaryotic cells, as well as on the levels of protein
that is translated from an open reading frame that is present
upstream (5') of the poly-A tail (Holtkamp et al., 2006, Blood,
vol. 108, pp. 4009-4017).
[0612] The poly-A tail may be of any length. In one embodiment, a
poly-A tail comprises, essentially consists of, or consists of at
least 20, at least 30, at least 40, at least 80, or at least 100
and up to 500, up to 400, up to 300, up to 200, or up to 150 A
nucleotides, and, in particular, about 120 A nucleotides. In this
context "essentially consists of" means that most nucleotides in
the poly-A tail, typically at least 75%, at least 80%, at least
85%, at least 90%, at least 95%, at least 96%, at least 97%, at
least 98%, or at least 99% by number of nucleotides in the poly-A
tail are A nucleotides, but permits that remaining nucleotides are
nucleotides other than A nucleotides, such as U nucleotides
(uridylate), G nucleotides (guanylate), or C nucleotides
(cytidylate). In this context, "consists of" means that all
nucleotides in the poly-A tail, i.e., 100% by number of nucleotides
in the poly-A tail, are A nucleotides. The term "A nucleotide" or
"A" refers to adenylate.
[0613] In some embodiments, a poly-A tail is attached during RNA
transcription, e.g., during preparation of in vitro transcribed
RNA, based on a DNA template comprising repeated dT nucleotides
(deoxythymidylate) in the strand complementary to the coding
strand. The DNA sequence encoding a poly-A tail (coding strand) is
referred to as poly(A) cassette.
[0614] In one embodiment of the present invention, the poly(A)
cassette present in the coding strand of DNA essentially consists
of dA nucleotides, but is interrupted by a random sequence of the
four nucleotides (dA, dC, dG, and dT). Such random sequence may be
5 to 50, 10 to 30, or 10 to 20 nucleotides in length. Such a
cassette is disclosed in WO 2016/005324 A1, hereby incorporated by
reference. Any poly(A) cassette disclosed in WO 2016/005324 A1 may
be used in the present invention. A poly(A) cassette that
essentially consists of dA nucleotides, but is interrupted by a
random sequence having an equal distribution of the four
nucleotides (dA, dC, dG, dT) and having a length of e.g. 5 to 50
nucleotides shows, on DNA level, constant propagation of plasmid
DNA in E. coli and is still associated, on RNA level, with the
beneficial properties with respect to supporting RNA stability and
translational efficiency. Consequently, in one embodiment of the
present invention, the poly-A tail contained in an RNA molecule
described herein essentially consists of A nucleotides, but is
interrupted by a random sequence of the four nucleotides (A, C, G,
U). Such random sequence may be 5 to 50, 10 to 30, or 10 to 20
nucleotides in length.
[0615] In one embodiment of the invention, no nucleotides other
than A nucleotides flank a poly-A tail at its 3' end, i.e., the
poly-A tail is not masked or followed at its 3' end by a nucleotide
other than A.
[0616] In some embodiments, a poly-A tail comprises the sequence:
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAUAUGACUAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA (SEQ ID
NO: 78), which is also shown in Table 2 following the 3' UTR
sequence.
[0617] "RNA" and "mRNA" are used interchangeably herein.
[0618] "IFN.alpha." is used generically herein to describe any
interferon alpha Type I cytokine, including IFN.alpha.2b and
IFN.alpha.4. In the experiments described in the Example section,
human IFN.alpha.2b and mouse IFN.alpha.4 were utilized. Any
IFN.alpha. may be incorporated into the compositions and used in
the methods described herein.
[0619] The term "treatment," as used herein, covers any
administration or application of a therapeutic for disease in a
subject, and includes inhibiting the disease, arresting its
development, relieving one or more symptoms of the disease, curing
the disease, or preventing reoccurrence of the disease. For
example, treatment of a solid tumor may comprise alleviating
symptoms of the solid tumor, decreasing the size of the solid
tumor, eliminating the solid tumor, reducing further growth of the
tumor, or reducing or eliminating recurrence of a solid tumor after
treatment. Treatment may also be measured as a change in a
biomarker of effectiveness or in an imaging or radiographic
measure.
[0620] The term "prevention," as used herein, means inhibiting or
arresting development of cancer, including solid tumors, in a
subject deemed to be cancer free.
[0621] "Metastasis" means the process by which cancer spreads from
the place at which it first arose as a primary tumor to other
locations in the body.
[0622] The term "intra-tumorally," as used herein, means into the
tumor. For example, intra-tumoral injection means injecting the
therapeutic at any location that touches the tumor.
[0623] The term "peri-tumorally," or "peri-tumoral," as used
herein, is an area that is about 2-mm wide and is adjacent to the
invasive front of the tumor periphery. The peri-tumoral area
comprises host tissue. See, for example, FIG. 36.
[0624] "Administering" means providing a pharmaceutical agent or
composition to a subject, and includes, but is not limited to,
administering by a medical professional and self-administering.
[0625] The disclosure describes nucleic acid sequences and amino
acid sequences having a certain degree of identity to a given
nucleic acid sequence or amino acid sequence, respectively (a
reference sequence).
[0626] "Sequence identity" between two nucleic acid sequences
indicates the percentage of nucleotides that are identical between
the sequences. "Sequence identity" between two amino acid sequences
indicates the percentage of amino acids that are identical between
the sequences.
[0627] The terms "% identical", "% identity" or similar terms are
intended to refer, in particular, to the percentage of nucleotides
or amino acids which are identical in an optimal alignment between
the sequences to be compared. Said percentage is purely
statistical, and the differences between the two sequences may be
but are not necessarily randomly distributed over the entire length
of the sequences to be compared. Comparisons of two sequences are
usually carried out by comparing said sequences, after optimal
alignment, with respect to a segment or "window of comparison", in
order to identify local regions of corresponding sequences. The
optimal alignment for a comparison may be carried out manually or
with the aid of the local homology algorithm by Smith and Waterman,
1981, Ads App. Math. 2, 482, with the aid of the local homology
algorithm by Neddleman and Wunsch, 1970, J. Mol. Biol. 48, 443,
with the aid of the similarity search algorithm by Pearson and
Lipman, 1988, Proc. Natl Acad. Sci. USA 88, 2444, or with the aid
of computer programs using said algorithms (GAP, BESTFIT, FASTA,
BLAST P, BLAST N and TFASTA in Wisconsin Genetics Software Package,
Genetics Computer Group, 575 Science Drive, Madison, Wis.).
[0628] Percentage identity is obtained by determining the number of
identical positions at which the sequences to be compared
correspond, dividing this number by the number of positions
compared (e.g., the number of positions in the reference sequence)
and multiplying this result by 100.
[0629] In some embodiments, the degree of identity is given for a
region which is at least about 50%, at least about 60%, at least
about 70%, at least about 80%, at least about 90% or about 100% of
the entire length of the reference sequence. For example, if the
reference nucleic acid sequence consists of 200 nucleotides, the
degree of identity is given for at least about 100, at least about
120, at least about 140, at least about 160, at least about 180, or
about 200 nucleotides, in some embodiments in continuous
nucleotides. In some embodiments, the degree of identity is given
for the entire length of the reference sequence.
[0630] Nucleic acid sequences or amino acid sequences having a
particular degree of identity to a given nucleic acid sequence or
amino acid sequence, respectively, may have at least one functional
property of said given sequence, e.g., and in some instances, are
functionally equivalent to said given sequence. One important
property includes the ability to act as a cytokine, in particular
when administered to a subject. In some embodiments, a nucleic acid
sequence or amino acid sequence having a particular degree of
identity to a given nucleic acid sequence or amino acid sequence is
functionally equivalent to said given sequence.
II. Compositions and Medical Preparations
[0631] A. Interleukin-2 (IL-2)
[0632] In some embodiments, the composition comprises a DNA
sequence encoding interleukin-2 (IL-2) (SEQ ID NO: 9). In some
embodiments, the DNA sequence encoding IL-2 is provided in SEQ ID
NO: 10.
[0633] In some embodiments, the composition comprises a
codon-optimized DNA sequence encoding IL-2. In some embodiments,
the codon-optimized DNA sequence comprises or consists of the
nucleotides of SEQ ID NOs: 11. In some embodiments, the DNA
sequence comprises a codon-optimized DNA sequence with 83%, 84%,
85%, 90%, 95%, 96%, 97%, 98%, or 99% identity to SEQ ID NO: 11.
[0634] The alignment of codon optimized IL-2 to native IL-2 is
shown below, where the "Q" is native IL-2 (NM_000586.3; SEQ ID NO:
10) and the "S" is codon optimized IL-2 (SEQ ID NO: 11). The
percent identity is 82.79%.
TABLE-US-00003 Q: 1
ATGTACAGGATGCAACTCCTGTCTTGCATTGCACTAAGTCTTGCACTTGTCACAAACAGT 60
|||||||| ||||| || |||||||||||||| || |||||| ||||| ||||| | S: 1
ATGTACAGAATGCAGCTGCTGTCTTGCATTGCTCTTTCTCTTGCTCTTGTGACAAATTCT 60 Q:
61 GCACCTACTTCAAGTTCTACAAAGAAAACACAGCTACAACTGGAGCATTTACTGCTGGAT 120
|| || || || ||| ||||||||||||||||| || || || || | || || ||| S: 61
GCTCCAACATCTTCTTCAACAAAGAAAACACAGCTTCAGCTTGAACACCTTCTTCTTGAT 120 Q:
121 TTACAGATGATTTTGAATGGAATTAATAATTACAAGAATCCCAAACTCACCAGGATGCTC
180 | ||||||||| |||||||||| || |||||||| ||||| ||||| || || ||||| S:
121 CTTCAGATGATTCTGAATGGAATCAACAATTACAAAAATCCAAAACTGACAAGAATGCTG
180 Q: 181
ACATTTAAGTTTTACATGCCCAAGAAGGCCACAGAACTGAAACATCTTCAGTGTCTAGAA 240
|||||||| ||||||||||| ||||| || |||||||||||||| |||||||| || ||| S: 181
ACATTTAAATTTTACATGCCAAAGAAAGCAACAGAACTGAAACACCTTCAGTGCCTTGAA 240 Q:
241 GAAGAACTCAAACCTCTGGAGGAAGTGCTAAATTTAGCTCAAAGCAAAAACTTTCACTTA
300 |||||||| ||||||||||| |||||||| ||| | ||||| |||||||| |||||| | S:
241 GAAGAACTCAAACCTCTGGAGGAAGTGCTAAATTTAGCTCAAAGCAAAAACTTTCACTTA
300 Q: 301
AGACCCAGGGACTTAATCAGCAATATCAACGTAATAGTTCTGGAACTAAAGGGATCTGAA 360
||||| || || | |||||||| ||||| || || || |||||||| || ||||||||| S: 301
AGACCAAGAGATCTGATCAGCAACATCAATGTGATTGTGCTGGAACTGAAAGGATCTGAA 360 Q:
361 ACAACATTCATGTGTGAATATGCTGATGAGACAGCAACCATTGTAGAATTTCTGAACAGA
420 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| S:
361 ACAACATTCATGTGTGAATATGCTGATGAAACAGCAACAATTGTGGAATTTCTGAACAGA
420 Q: 421 TGGATTACCTTTTGTCAAAGCATCATCTCAACACTGACT 459 ||||| ||
||||| || ||||| ||||||||||| S: 421
TGGATCACATTTTGCCAGTCAATCATTTCAACACTGACA 459
[0635] In some embodiments, the composition comprises an RNA
sequence transcribed from a DNA sequence encoding IL-2. In some
embodiments, the RNA sequence is transcribed from a nucleotide
sequence comprising SEQ ID NO: 10 or 11. In some embodiments, the
RNA sequence comprises or consists of SEQ ID NOs: 12 or 13. In some
embodiments, the RNA sequence comprises or consists of an RNA
sequence with 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99%
identity to SEQ ID NOs: 12 or 13.
[0636] In some embodiments, one or more uridine in the IL-2 RNA is
replaced by a modified nucleoside as described herein. In some
embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U).
[0637] In some embodiments, the IL-2 RNA comprises an altered
nucleotide at the 5' end. In some embodiments, the IL-2 RNA
comprises a 5' cap. Any 5' cap known in the art may be used. In
some embodiments, the 5' cap comprises a 5' to 5' triphosphate
linkage. In some embodiments, the 5' cap comprises a 5' to 5'
triphosphate linkage including thiophosphate modification. In some
embodiments, the 5' cap comprises a 2'-O or 3'-O-ribose-methylated
nucleotide. In some embodiments, the 5' cap comprises a modified
guanosine nucleotide or modified adenosine nucleotide. In some
embodiments, the 5' cap comprises 7-methylguanylate. In some
embodiments, the 5' cap is Cap0 or Cap1. Exemplary cap structures
include m7G(5')ppp(5')G, m7,2' O-mG(5')ppsp(5')G, m7G(5')ppp(5')2'
O-mG, and m7,3' O-mG(5')ppp(5')2' O-mA.
[0638] In some embodiments, the IL-2 RNA comprises a 5'
untranslated region (UTR). In some embodiments, the 5' UTR is
upstream of the initiation codon. In some embodiments, the 5' UTR
regulates translation of the RNA. In some embodiments, the 5' UTR
is a stabilizing sequence. In some embodiments, the 5' UTR
increases the half-life of RNA. Any 5' UTR known in the art may be
used. In some embodiments, the 5' UTR RNA sequence is transcribed
from a nucleotide sequence comprising SEQ ID NOs: 1, 3, or 5. In
some embodiments, the 5' UTR RNA sequence comprises or consists of
SEQ ID NOs: 2, 4, or 6. In some embodiments, the 5' UTR RNA
sequence is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
or 99% identical to SEQ ID NOs: 2, 4, or 6.
[0639] In some embodiments, the IL-2 RNA comprises a 3' UTR. In
some embodiments, the 3' UTR follows the translation termination
codon. In some embodiments, the 3' UTR regulates polyadenylation,
translation efficiency, localization, or stability of the RNA. In
some embodiments, the 3' UTR RNA sequence is transcribed from a
nucleotide sequence comprising SEQ ID NO: 7. In some embodiments,
the 3' UTR RNA sequence comprises or consists of SEQ ID NO: 8. In
some embodiments, the 3' UTR RNA sequence is at least 70%, 75%,
80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99% identical to SEQ ID NO:
8.
[0640] In some embodiments, the IL-2 composition comprises both a
5' UTR and a 3' UTR. In some embodiments, the composition comprises
only a 5' UTR. In some embodiments, the composition comprises only
a 3' UTR.
[0641] In some embodiments, the IL-2 RNA comprises a poly-A tail.
In some embodiments, the RNA comprises a poly-A tail of at least
about 25, at least about 30, at least about 50, at least about 70,
or at least about 100 nucleotides. In some embodiments, the poly-A
tail comprises 200 or more nucleotides. In some embodiments, the
poly-A tail comprises or consists of SEQ ID NO: 78.
[0642] In some embodiments, the RNA comprises a 5' cap, a 5' UTR, a
nucleic acid encoding IL-2, a 3' UTR, and a poly-A tail, in that
order.
[0643] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence that
is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NOs: 10 or 11 and at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs:
1, 3, or 5.
[0644] In some embodiments, the composition comprises an RNA
sequence, that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 10 or 11 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5.
The RNA may also be recombinantly produced. In some embodiments,
one or more uridine in the IL-2 RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0645] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 10 or 11 and at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO:
7.
[0646] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 10 or 11 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7. In some
embodiments, one or more uridine in the IL-2 RNA is replaced by a
modified nucleoside as described herein. In some embodiments, the
modified nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0647] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 10 or 11; at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1,
3, or 5; and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
99%, or 100% identical to SEQ ID NO: 7.
[0648] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 10 or 11; at least 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5; and at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 7. The RNA may also be recombinantly
produced.
[0649] In some embodiments, one or more uridine in the IL-2 RNA is
replaced by a modified nucleoside as described herein. In some
embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, the RNA comprises
a modified nucleoside in place of each uridine. In some
embodiments, the modified nucleoside is N1-methyl-pseudouridine
(m.sup.1.psi.).
[0650] In some embodiments, the composition comprises an RNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 12 or 13; at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 2,
4, or 6; and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
99%, or 100% identical to SEQ ID NO: 8. In some embodiments, one or
more uridine in the IL-2 RNA is replaced by a modified nucleoside
as described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.).
[0651] B. Interleukin-12 Single-Chain (IL-12sc)
[0652] In some embodiments, the composition comprises a DNA
sequence encoding interleukin-12 single-chain (IL-12sc) (e.g., SEQ
ID NO: 14), which comprises IL-12 p40 (sometimes referred to as
IL-12B), a linker, such as a GS linker, and IL-12 p35 (sometimes
referred to as IL-12A). In some embodiments, the IL-12p40, linker,
and IL-12p35 are consecutive with no intervening nucleotides. An
exemplary DNA sequence encoding IL-12sc is provided in SEQ ID NO:
15.
[0653] The alignment of codon optimized IL-12 p40 to native IL-12
p40 is shown below, where the "S" is native IL-12 p40 (NM_002187.2;
nucleotides 1-984 of SEQ ID NO: 15) and the "Q" is codon optimized
IL-12 p40 (nucleotides 1-984 of SEQ ID NO: 16). The percent
identity is 77%.
TABLE-US-00004 Q: 1
ATGTGTCACCAGCAGCTGGTGATCTCATGGTTCTCCCTGGTATTTCTGGCATCTCCTCTT 60
||||||||||||||| |||| ||||| ||||| |||||||| |||||||||||||| ||| S: 1
ATGTGTCACCAGCAGTTGGTCATCTCTTGGTTTTCCCTGGTTTTTCTGGCATCTCCCCTC 60 Q:
61 GTCGCAATCTGGGAACTGAAGAAAGACGTGTATGTCGTTGAGCTCGACTGGTATCCGGAT 120
|| || || ||||||||||||||||| || |||||||| || | || |||||||||||| S: 61
GTGGCCATATGGGAACTGAAGAAAGATGTTTATGTCGTAGAATTGGATTGGTATCCGGAT 120 Q:
121 GCGCCTGGCGAGATGGTGGTGCTGACCTGTGACACCCCAGAGGAGGATGGGATCACTTGG
180 || ||||| || |||||||| || |||||||||||||| || || ||||| ||||| ||| S:
121 GCCCCTGGAGAAATGGTGGTCCTCACCTGTGACACCCCTGAAGAAGATGGTATCACCTGG
180 Q: 181
ACCCTTGATCAATCCTCCGAAGTGCTCGGGTCTGGCAAGACTCTGACCATACAAGTGAAA 240
||| | || || | || || | || |||||||| || |||||||| ||||| ||| S: 181
ACCTTGGACCAGAGCAGTGAGGTCTTAGGCTCTGGCAAAACCCTGACCATCCAAGTCAAA 246 Q:
241 GAGTTTGGCGATGCCGGGCAGTACACTTGCCATAAGGGCGGAGAAGTTCTGTCCCACTCA
300 |||||||| ||||| || |||||||| || || || || || || ||||| ||| || S:
241 GAGTTTGGAGATGCTGGCCAGTACACCTGTCACAAAGGAGGCGAGGTTCTAAGCCATTCG
300 Q: 301
CTGCTGCTGCTGCACAAGAAAGAGGACGGAATTTGGAGTACCGATATCCTGAAAGATCAG 360 ||
|||||||| ||||| || || || ||||||||| || ||||| | || || ||| S: 301
CTCCTGCTGCTTCACAAAAAGGAAGATGGAATTTGGTCCACTGATATTTTAAAGGACCAG 360 Q:
361 AAAGAGCCCAAGAACAAAACCTTCTTGCGGTGCGAAGCCAAGAACTACTCAGGGAGATTT
420 ||||| ||||| || || ||||| | | ||||| |||||||| || || || | || S: 361
AAAGAACCCAAAAATAAGACCTTTCTAAGATGCGAGGCCAAGAATTATTCTGGACGTTTC 420 Q:
421 ACTTGTTGGTGGCTGACGACGATCAGCACCGATCTGACTTTCTCCGTGAAATCAAGTAGG
480 || || |||||||||||||| ||||| || ||| |||| ||| || ||| || || S: 421
ACCTGCTGGTGGCTGACGACAATCAGTACTGATTTGACATTCAGTGTCAAAAGCAGCAGA 480 Q:
481 GGATCATCTGACCCTCAAGGAGTCACATGTGGAGCGGCTACTCTGAGCGCTGAACGCGTA
540 || || |||||||| ||||| || || || ||||| ||||| || || || | || S: 481
GGCTCTTCTGACCCCCAAGGGGTGACGTGCGGAGCTGCTACACTCTCTGCAGAGAGAGTC 540 Q:
541 AGAGGGGACAATAAGGAGTACGAGTATAGCGTTGAGTGCCAAGAGGATAGCGCATGCCCC
690 ||||||||||| |||||||| ||||| || |||||||| ||||| || || ||||| S: 541
AGAGGGGACAACAAGGAGTATGAGTACTCAGTGGAGTGCCAGGAGGACAGTGCCTGCCCA 690 Q:
601 GCCGCCGA--AGAATCATTGCCCATTGAAGTGATGGTGGATGCTGTACACAAGCTGAAGT
658 || || || ||| || | ||||||||| || ||||||||||| || |||||||| |||| S:
601 GCTGCTGAGGAGAGTC-T-GCCCATTGAGGTCATGGTGGATGCCGTTCACAAGCTCAAGT
858 Q: 659
ATGAGAACTACACAAGCTCCTTCTTCATCCGTGACATCATCAAACCAGATCCTCCTAAGA 718
|||| |||||||| ||| |||||||||| | |||||||||||||| || || || |||| S: 659
ATGAAAACTACACCAGCAGCTTCTTCATCAGGGACATCATCAAACCTGACCCACCCAAGA 718 Q:
719 ACCTCCAGCTTAAACCTCTGAAGAACTCTAGACAGGTGGAAGTGTCTTGGGAGTATCCCG
778 || | ||||| || || | ||||| ||| | |||||||| || |||||||| || | S: 719
ACTTGCAGCTGAAGCCATTAAAGAATTCTCGGCAGGTGGAGGTCAGCTGGGAGTACCCTG 778 Q:
779 ACACCTGGTCTACACCACATTCCTACTTCAGTCTCACATTCTGCGTTCAGGTACAGGGCA
838 |||||||| ||| ||||||||||||||| || ||||||||||||||||| ||||||| S:
779 ACACCTGGAGTACTCCACATTCCTACTTCTCCCTGACATTCTGCGTTCAGGTCCAGGGCA
838 Q: 839
AGTCCAAAAGGGAGAAGAAGGATCGGGTCTTTACAGATAAAACAAGTGCCACCGTTATAT 898 ||
||| || || ||||| ||| | ||||| || || || || ||||| || || | S: 839
AGAGCAAGAGAGAAAAGAAAGATAGAGTCTTCACGGACAAGACCTCAGCCACGGTCATCT 898 Q:
899 GCCGGAAGAATGCCTCTATTTCTGTGCGTGCGCAGGACAGATACTATAGCAGCTCTTGGA
958 |||| || |||||| ||| ||||| || |||||| | ||||||||| ||||||| S: 899
GCCGCAAAAATGCCAGCATTAGCGTGCGGGCCCAGGACCGCTACTATAGCTCATCTTGGA 958 Q
959 GTGAATGGGC--CAGTGTCCCATGTTCA 984 | |||||||| | ||| ||| || || S:
959 GCGAATGGGCATCTGTG-CCC-TG--CA 982
[0654] The alignment of codon optimized IL-12 p35 to native IL-12
p35 is shown below, where the "S" is native IL-12 p35 (NM_00882.3;
nucleotides 1027-1623 of SEQ ID NO: 15) and the "Q" is codon
optimized IL-12 p35 (nucleotides 1027-1623 of SEQ ID NO: 16). The
percent identity is 80%.
TABLE-US-00005 Q: 1
AGAAATCTCCCTGTGGCTACACCTGATCCAGGCATGTTTCCCTGTTTGCACCATAGCCAA 60
||||| ||||| ||||| || || || ||||| ||||| || || | ||||| |||| S: 1
AGAAACCTCCCCGTGGCCACTCCAGACCCAGGAATGTTCCCATGCCTTCACCACTCCCAA 60 Q:
61 AACCTCCTGAGAGCAGTCAGCAACATGCTCCAGAAAGCTAGACAAACACTGGAATTCTAC 120
||||| ||||| || |||||||||||||||||||| || |||||||| || ||||| ||| S: 61
AACCTGCTGAGGGCCGTCAGCAACATGCTCCAGAAGGCCAGACAAACTCTAGAATTTTAC 120 Q:
121 CCATGCACCTCCGAGGAAATAGATCACGAGGATATCACTAAGGACAAAACAAGCACTGTC
180 || ||||| || || || || ||||| || |||||||| || || ||||| ||||| || S:
121 CCTTGCACTTCTGAAGAGATTGATCATGAAGATATCACAAAAGATAAAACCAGCACAGTG
180 Q. 181
GAAGCATGCCTTCCCTTGGAACTGACAAAGAACGAGAGTTGCCTTAATTCAAGAGAAACA 240 ||
|| || | || |||||| | || ||||| ||||||||||| ||||| ||||| || S: 181
GAGGCCTGTTTACCATTGGAATTAACCAAGAATGAGAGTTGCCTAAATTCCAGAGAGACC 240 Q:
241 TCTTTCATTACAAACGGTAGCTGCTTGGCAAGCAGAAAAACATCTTTTATGATGGCCCTT
300 |||||||| || || || || ||| |||| |||||| || ||||||||||||||||| S 241
TCTTTCATAACTAATGGGAGTTGCCTGGCCTCCAGAAAGACCTCTTTTATGATGGCCCTG 300 Q:
301 TGTCTGAGCAGTATTTATGAGGATCTCAAAATGTACCAGGTGGAGTTTAAGACCATGAAT
360 || || || || |||||||| || | || ||||||||||||||||| ||||||||||| S:
301 TGCCTTAGTAGTATTTATGAAGACTTGAAGATGTACCAGGTGGAGTTCAAGACCATGAAT
360 Q: 361
GCCAAGCTGCTGATGGACCCAAAGAGACAGATTTTCCTCGATCAGAATATGCTGGCTGTG 420 ||
||||| |||||||| || ||||| ||||| || || ||||| || |||||||| || S: 361
GCAAAGCTTCTGATGGATCCTAAGAGGCAGATCTTTCTAGATCAAAACATGCTGGCAGTT 420 Q:
421 ATTGATGAACTGATGCAGGCCTTGAATTTCAACAGCGAAACCGTTCCCCAGAAAAGCAGT
480 |||||||| |||||||||||| ||||||||||||| || || || || || ||| | S: 421
ATTGATGAGCTGATGCAGGCCCTGAATTTCAACAGTGAGACTGTGCCACAAAAATCCTCC 480 Q:
481 CTTGAAGAACCTGACTTTTATAAGACCAAGATCAAACTGTGTATTCTCCTGCATGCCTTT
540 ||||||||||| || |||||||| || || ||||| || || || || || ||||| || S:
401 CTTGAAGAACCGGATTTTTATAAAACTAAAATCAAGCTCTGCATACTTCTTCATGCTTTC
540 Q: 541 AGAATCAGAGCAGTCACTATAGATAGAGTGATGTCCTACCTGAATGCTTCC 591
||||| | ||||| ||||| |||||||||||| ||| |||||||||||| S: 541
AGAATTCGGGCAGTGACTATTGATAGAGTGATGAGCTATCTGAATGCTTCC 591
[0655] In some embodiments, the composition comprises a
codon-optimized DNA sequence encoding IL-12sc. In some embodiments,
the composition comprises a codon-optimized DNA sequence encoding
IL-12 p40. In some embodiments, the composition comprises a
codon-optimized DNA sequence encoding IL-12 p35. In some
embodiments, the codon-optimized DNA sequence comprises or consists
of SEQ ID NO: 16. In some embodiments, the DNA sequence comprises a
codon-optimized DNA sequence with 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, or 99% identity to SEQ ID NO: 16. In some
embodiments, the codon-optimized DNA sequence encoding IL-12 p40
comprises the nucleotides encoding the IL-12sc-p40 (nucleotides
1-984 of SEQ ID NO: 16). In some embodiments, the codon-optimized
DNA sequence encoding IL-12 p35 comprises the nucleotides encoding
the IL-12sc-p35 (nucleotides 1027-1623 of SEQ ID NO: 16). In some
embodiments, the codon-optimized DNA sequence encoding IL-12sc
comprises the nucleotides encoding the IL-12sc-p40 (nucleotides
1-984 of SEQ ID NO: 16) and -p35 (nucleotides 1027-1623 of SEQ ID
NO: 16) portions of SEQ ID NO: 16 and further comprises nucleotides
between the p40 and p35 portions (e.g., nucleotides 985-1026 of SEQ
ID NO: 16) encoding a linker polypeptide connecting the p40 and p35
portions. Any linker known to those of skill in the art may be
used. The p40 portion may be 5' or 3' to the p35 portion.
[0656] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
encoding IL-12sc. The RNA may also be recombinantly produced. In
some embodiments, the RNA sequence is transcribed from a nucleotide
sequence comprising SEQ ID NOs: 15 or 16. In some embodiments, the
RNA sequence comprises or consists of SEQ ID NOs: 17 or 18. In some
embodiments, the RNA sequence comprises or consists of an RNA
sequence with 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99%
identity to SEQ ID NOs: 17 or 18. In some embodiments, the RNA
sequence comprises the nucleotides encoding the IL-12sc-p40
(nucleotides 1-984 of SEQ ID NOs: 17 or 18) and -p35 (nucleotides
1027-1623 of SEQ ID NOs: 17 or 18) portions of SEQ ID NOs: 17 or
18. In some embodiments, the codon-optimized RNA sequence encoding
IL-12sc comprises the nucleotides encoding the IL-12sc-p40
(nucleotides 1-984 of SEQ ID NO: 18) and -p35 (nucleotides
1027-1623 of SEQ ID NO: 18) portions of SEQ ID NO: 18 and further
comprises nucleotides between the p40 and p35 portions encoding a
linker polypeptide connecting the p40 and p35 portions. Any linker
known to those of skill in the art may be used.
[0657] In some embodiments, one or more uridine in the IL-12sc RNA
is replaced by a modified nucleoside as described herein. In some
embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, the RNA comprises
a modified nucleoside in place of each uridine. In some
embodiments, the modified nucleoside is N1-methyl-pseudouridine
(m.sup.1.psi.).
[0658] In some embodiments, the IL-12sc RNA comprises an altered
nucleotide at the 5' end. In some embodiments, the RNA comprises a
5' cap. Any 5' cap known in the art may be used. In some
embodiments, the 5' cap comprises a 5' to 5' triphosphate linkage.
In some embodiments, the 5' cap comprises a 5' to 5' triphosphate
linkage including thiophosphate modification. In some embodiments,
the 5' cap comprises a 2'-O or 3'-O-ribose-methylated nucleotide.
In some embodiments, the 5' cap comprises a modified guanosine
nucleotide or modified adenosine nucleotide. In some embodiments,
the 5' cap comprises 7-methylguanylate. In some embodiments, the 5'
cap is Cap0 or Cap1. Exemplary cap structures include
m7G(5')ppp(5')G, m7,2' O-mG(5')ppsp(5')G, m7G(5')ppp(5')2' O-mG,
and m7,3' O-mG(5')ppp(5')2' O-mA.
[0659] In some embodiments, the IL-12sc RNA comprises a 5'
untranslated region (UTR). In some embodiments, the 5' UTR is
upstream of the initiation codon. In some embodiments, the 5' UTR
regulates translation of the RNA. In some embodiments, the 5' UTR
is a stabilizing sequence. In some embodiments, the 5' UTR
increases the half-life of RNA. Any 5' UTR known in the art may be
used. In some embodiments, the 5' UTR RNA sequence is transcribed
from SEQ ID NOs: 1, 3, or 5. In some embodiments, the 5' UTR RNA
sequence comprises or consists of SEQ ID NOs: 2, 4, or 6. In some
embodiments, the 5' UTR RNA sequence is at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, or 99% identical to SEQ ID NOs: 2, 4,
or 6.
[0660] In some embodiments, the IL-12sc RNA comprises a 3' UTR. In
some embodiments, the 3' UTR follows the translation termination
codon. In some embodiments, the 3' UTR regulates polyadenylation,
translation efficiency, localization, or stability of the RNA. In
some embodiments, the 3' UTR RNA sequence is transcribed from SEQ
ID NO: 7. In some embodiments, the 3' UTR RNA sequence comprises or
consists of SEQ ID NO: 8. In some embodiments, the 3' UTR RNA
sequence is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
or 99% identical to SEQ ID NO: 8.
[0661] In some embodiments, the IL-12sc composition comprises both
a 5' UTR and a 3' UTR. In some embodiments, the IL-12sc composition
comprises only a 5' UTR. In some embodiments, the IL-12sc
composition comprises only a 3' UTR.
[0662] In some embodiments, the IL-12sc RNA comprises a poly-A
tail. In some embodiments, the RNA comprises a poly-A tail of at
least about 25, at least about 30, at least about 50 nucleotides,
at least about 70 nucleotides, or at least about 100 nucleotides.
In some embodiments, the poly-A tail comprises 200 or more
nucleotides. In some embodiments, the poly-A tail comprises or
consists of SEQ ID NO: 78.
[0663] In some embodiments, the RNA comprises a 5' cap, a 5' UTR, a
nucleic acid encoding IL-12sc, a 3' UTR, and a poly-A tail, in that
order.
[0664] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence that
is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NOs: 15 or 16 and at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs:
1, 3, or 5.
[0665] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 15 or 16 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5.
The RNA may also be recombinantly produced. In some embodiments,
one or more uridine in the IL-12sc RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0666] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 15 or 16 and at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO:
7.
[0667] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 15 or 16 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7. The RNA may
also be recombinantly produced. In some embodiments, one or more
uridine in the IL-12sc RNA is replaced by a modified nucleoside as
described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.).
[0668] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 15 or 16; at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1,
3, or 5; and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
99%, or 100% identical to SEQ ID NO: 7.
[0669] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 15 or 16; at least 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5; and at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 7. The RNA may also be recombinantly
produced. In some embodiments, one or more uridine in the IL-12sc
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, the RNA comprises
a modified nucleoside in place of each uridine. In some
embodiments, the modified nucleoside is N1-methyl-pseudouridine
(m.sup.1.psi.).
[0670] In some embodiments, the composition comprises an RNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 17 or 18; at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 2,
4, or 6; and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
99%, or 100% identical to SEQ ID NO: 8. In some embodiments, one or
more uridine in the IL-12sc RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U).
[0671] C. Interferon Alpha (IFN.alpha.)
[0672] In some embodiments, the composition comprises a DNA
sequence encoding interferon alpha (IFN.alpha.) (e.g., SEQ ID NO:
19). An exemplary DNA sequence encoding this IFN.alpha. is provided
in SEQ ID NO: 20.
[0673] The alignment of codon optimized IFN.alpha. to native
IFN.alpha. is shown below, where the "S" is native IFN.alpha.
(NM_000605.3; SEQ ID NO: 20) and the "Q" is codon optimized
IFN.alpha. (SEQ ID NO: 21). The percent identity is 79%.
TABLE-US-00006 Q 1
ATGGCCCTGACTTTTGCCCTTCTCGTGGCTTTGTTGGTGCTGAGTTGCAAATCTTCCTGT 60
|||||| |||| ||||| | || ||||| | ||||||| || ||||| || ||| S: 1
ATGGCCTTGACCTTTGCTTTACTGGTGGCCCTCCTGGTGCTCAGCTGCAAGTCAAGCTGC 60 Q:
61 AGTGTCGGATGTGATCTGCCTCAAACCCACAGTCTGGG-ATCTAGGAGAACACTGATGCT 119
||| || ||||||||||||||||||||||| ||||| | | ||||| || ||||||| S: 61
TCTGTGGGCTGTGATCTGCCTCAAACCCACAGCCTGGGTAGC-AGGAGGACCTTGATGCT 119 Q:
120 GTTGGCACAGATGAGGAGAAT-TAGC-CTCTTTTCCTGCCTGAAGGATAGACATGACTTC
177 ||||||||||||||||||| | | || || |||||| ||||||| ||||||||||| S: 120
CCTGGCACAGATGAGGAGAATCT--CTCTTTTCTCCTGCTTGAAGGACAGACATGACTTT 177 Q:
178 GGCTTTCCCCAAGAGGAGTTTGGCAATCAGTTCCAGAAAGCGGAAACGATTCCCGTTCTG
237 || |||||||| |||||||||||||| |||||||| || || ||||| || || || || S:
178 GGATTTCCCCAGGAGGAGTTTGGCAACCAGYYCCAAAAGGCTGAAACCATCCCTGTCCTC
237 Q: 238
CACGAGATGATCCAGCAGATCTTCAACCTCTTTTCAAC-CAAAG-ACAGCTCAGCAGCCT 295 ||
||||||||||||||||||||||| ||||| || | ||||| || || || || | S: 238
CATGAGATGATCCAGCAGATCTTCAATCTCTT--CAGCACAAAGGACTCATCTGCTGCTT 295 Q:
296 GGGATGAGACACTGCTGGACAAATTCTACACAGAACTGTATCAGCAGCTTAACGATCTGG
355 |||||||||| || || |||||||||||||| ||||| || |||||||| || || |||| S:
296 GGGATGAGACCCTCCTAGACAAATTCTACACTGAACTCTACCAGCAGCTGAATGACCTGG
355 Q 356
AGGCATGCGTGATCCAAGGGGTTGGTGTGACTGAAACTCCGCTTATGAAGGAGGACTCCA 415 |
|| || ||||| || ||||| || ||||| || ||||| || |||||||||||||||| S: 356
AAGCCTGTGTGATACAGGGGGTGGGGGTGACAGAGACTCCCCTGATGAAGGAGGACTCCA 415 Q:
416 TTCTGGCTGTACGGAAGTACTTCCAGAGAATAACCCTCTATCTGAAGGAGAAGAAGTACT
475 |||||||||| |||| |||||||| ||||| || ||||||||||| |||||||| ||| S:
416 TTCTGGCTGTGAGGAAATACTTCCAAAGAATCACTCTCTATCTGAAAGAGAAGAAATACA
475 Q: 476
CACCATGTGCTTGGGAAGTCGTGAGAGCCGAAATCATGAGATCCTTCAGCCTTAG-CACC 534 ||
||||| ||||| || || ||||| |||||||||||||| || | || | || | S: 476
GCCCTTGTGCCTGGGAGGTTGTCAGAGCAGAAATCATGAGATC-TTTTTC-TTTGTCAAC 533 Q:
535 AATC-TCCAGGAATCTCTGAGAAGCAAAGAG 564 || | | || ||| | | ||||| ||
|| S: 534 AAACTTGCAAGAAAGTTTAAGAAGTAAGGAA 564
[0674] In some embodiments, the composition comprises a
codon-optimized DNA sequence encoding IFN.alpha.. In some
embodiments, the codon-optimized DNA sequence comprises or consists
of the nucleotides of SEQ ID NO: 21. In some embodiments, the DNA
sequence comprises or consists of a codon-optimized DNA sequence
with 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99% identity
to SEQ ID NO: 21.
[0675] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
encoding IFN.alpha.. The RNA may also be recombinantly produced. In
some embodiments, the RNA sequence is transcribed from a nucleotide
sequence comprising SEQ ID NOs: 20 or 21. In some embodiments, the
RNA sequence comprises or consists of SEQ ID NOs: 22 or 23. In some
embodiments, the RNA sequence comprises or consists of an RNA
sequence with 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99%
identity to SEQ ID NOs: 22 or 23.
[0676] In some embodiments, one or more uridine in the IFN.alpha.
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, each uridine in
the RNA is modified. In some embodiments, each uridine in the RNA
is modified with N1-methyl-pseudouridine (m.sup.1.psi.).
[0677] In some embodiments, the IFN.alpha. RNA comprises an altered
nucleotide at the 5' end. In some embodiments, the IFN.alpha. RNA
comprises a 5' cap. Any 5' cap known in the art may be used. In
some embodiments, the 5' cap comprises a 5' to 5' triphosphate
linkage. In some embodiments, the 5' cap comprises a 5' to 5'
triphosphate linkage including thiophosphate modification. In some
embodiments, the 5' cap comprises a 2'-O or 3''-O-ribose-methylated
nucleotide. In some embodiments, the 5' cap comprises a modified
guanosine nucleotide or modified adenosine nucleotide. In some
embodiments, the 5' cap comprises 7-methylguanylate. In some
embodiments, the 5' cap is Cap0 or Cap1. Exemplary cap structures
include m7G(5')ppp(5')G, m7,2' O-mG(5')ppsp(5')G, m7G(5')ppp(5')2'
O-mG and m7,3' O-mG(5')ppp(5')2' O-mA.
[0678] In some embodiments, the IFN.alpha. RNA comprises a 5'
untranslated region (UTR). In some embodiments, the 5' UTR is
upstream of the initiation codon. In some embodiments, the 5' UTR
regulates translation of the RNA. In some embodiments, the 5' UTR
is a stabilizing sequence. In some embodiments, the 5' UTR
increases the half-life of RNA. Any 5' UTR known in the art may be
used. In some embodiments, the 5' UTR RNA sequence is transcribed
from a nucleotide sequence comprising SEQ ID NOs: 1, 3, or 5. In
some embodiments, the 5' UTR RNA sequence comprises or consists of
SEQ ID NOs: 2, 4, or 6. In some embodiments, the 5' UTR RNA
sequence is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
or 99% identical to SEQ ID NOs: 2, 4, or 6.
[0679] In some embodiments, the IFN.alpha. RNA comprises a 3' UTR.
In some embodiments, the 3' UTR follows the translation termination
codon. In some embodiments, the 3' UTR regulates polyadenylation,
translation efficiency, localization, or stability of the RNA. In
some embodiments, the 3' UTR RNA sequence is transcribed from a
nucleotide sequence comprising SEQ ID NO: 7. In some embodiments,
the 3' UTR RNA sequence comprises or consists of SEQ ID NO: 8. In
some embodiments, the 3' UTR RNA sequence is at least 70%, 75%,
80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99% identical to SEQ ID NO:
8.
[0680] In some embodiments, the IFN.alpha. composition comprises
both a 5' UTR and a 3' UTR. In some embodiments, the composition
comprises only a 5' UTR. In some embodiments, the composition
comprises only a 3' UTR.
[0681] In some embodiments, the IFN.alpha. RNA comprises a poly-A
tail. In some embodiments, the IFN.alpha. RNA comprises a poly-A
tail of at least about 25, at least about 30, at least about 50
nucleotides, at least about 70 nucleotides, or at least about 100
nucleotides. In some embodiments, the poly-A tail comprises 200 or
more nucleotides. In some embodiments, the poly-A tail comprises or
consists of SEQ ID NO: 78.
[0682] In some embodiments, the RNA comprises a 5' cap, a 5' UTR, a
nucleic acid encoding IFN.alpha., a 3' UTR, and a poly-A tail, in
that order.
[0683] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence that
is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NOs: 20 or 21 and at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs:
1, 3, or 5.
[0684] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 20 or 21 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5.
The RNA may also be recombinantly produced. In some embodiments,
one or more uridine in the IFN.alpha. RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0685] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 20 or 21 and at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO:
7.
[0686] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 20 or 21 and at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7. In some
embodiments, one or more uridine in the IFN.alpha. RNA is replaced
by a modified nucleoside as described herein. In some embodiments,
the modified nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0687] In some embodiments, the composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NOs: 20 or 21; at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1,
3, or 5; and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
99%, or 100% identical to SEQ ID NO: 7.
[0688] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NOs: 20 or 21; at least 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5; and at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 7. The RNA may also be recombinantly
produced. In some embodiments, one or more uridine in the
IFN.alpha. RNA is replaced by a modified nucleoside as described
herein. In some embodiments, the modified nucleoside replacing
uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.). In some embodiments, the
composition comprises an RNA sequence comprising or consisting of a
nucleic acid sequence at least 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, 99%, or 100% identical to SEQ ID NOs: 22 or 23; at least
70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical
to SEQ ID NOs: 2, 4, or 6; and at least 70%, 75%, 80%, 85%, 90%,
95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 8. In some
embodiments, one or more uridine in the IFN.alpha. RNA is replaced
by a modified nucleoside as described herein. In some embodiments,
the modified nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U).
[0689] D. IL-15 Sushi
[0690] As used herein, the term "IL-15 sushi" describes a construct
comprising the soluble interleukin 15 (IL-15) receptor alpha sushi
domain and mature interleukin alpha (IL-15) as a fusion protein. In
some embodiments, the composition comprises a DNA sequence encoding
IL-15 sushi (SEQ ID NO: 24), which comprises the soluble IL-15
receptor alpha chain (sushi) followed by a glycine-serine (GS)
linker followed by the mature sequence of IL-15. The DNA sequence
encoding this IL-15 sushi is provided in SEQ ID NO: 25.
[0691] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
encoding IL-15 sushi. The RNA may also be recombinantly produced.
In some embodiments, the RNA sequence is transcribed from a
nucleotide sequence comprising SEQ ID NO: 25. In some embodiments,
the nucleotides encoding the linker may be completely absent or
replaced in part or in whole with any nucleotides encoding a
suitable linker. In some embodiments, the RNA sequence comprises or
consists of SEQ ID NO: 26. In some embodiments, the RNA sequence
comprises an RNA sequence with 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, or 99% identity to SEQ ID NO: 26. In some embodiments,
the DNA or RNA sequence encoding IL-15 sushi comprises the
nucleotides encoding the sushi domain of IL-15 receptor alpha
(e.g., nucleotide 1-321 of SEQ ID NOs: 25 or 26) and mature IL-15
(e.g., nucleotide 382-729 of SEQ ID NO: 25 or 26). In some
embodiments, the DNA or RNA sequence encoding IL-15 sushi comprises
the nucleotides encoding the sushi domain of IL-15 receptor alpha
(e.g., nucleotide 1-321 of SEQ ID NOs: 25 or 26) and mature IL-15
(e.g., nucleotide 382-729 of SEQ ID NOs: 25 or 26) and further
comprises nucleotides between these portions encoding a linker
polypeptide connecting the portions. In some embodiments, the
linker comprises nucleotides 322-381 of SEQ ID Nos: 25 or 26. Any
linker known to those of skill in the art may be used.
[0692] In some embodiments, one or more uridine in the IL-15 sushi
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, the RNA comprises
a modified nucleoside in place of each uridine. In some
embodiments, the modified nucleoside is N1-methyl-pseudouridine
(m.sup.1.psi.).
[0693] In some embodiments, the IL-15 sushi RNA comprises an
altered nucleotide at the 5' end. In some embodiments, the IL-15
sushi RNA comprises a 5' cap. Any 5' cap known in the art may be
used. In some embodiments, the 5' cap comprises a 5' to 5'
triphosphate linkage. In some embodiments, the 5' cap comprises a
5' to 5' triphosphate linkage including thiophosphate modification.
In some embodiments, the 5' cap comprises a 2'-O or
3'-O-ribose-methylated nucleotide. In some embodiments, the 5' cap
comprises a modified guanosine nucleotide or modified adenosine
nucleotide. In some embodiments, the 5' cap comprises
7-methylguanylate. In some embodiments, the 5' cap is Cap0 or Cap1.
Exemplary cap structures include m7G(5')ppp(5')G, m7,2'
O-mG(5')ppsp(5')G, m7G(5')ppp(5')2' O-mG and m7,3'
O-mG(5')ppp(5')2' O-mA.
[0694] In some embodiments, the IL-15 sushi RNA comprises a 5'
untranslated region (UTR). In some embodiments, the 5' UTR is
upstream of the initiation codon. In some embodiments, the 5' UTR
regulates translation of the RNA. In some embodiments, the 5' UTR
is a stabilizing sequence. In some embodiments, the 5' UTR
increases the half-life of RNA. Any 5' UTR known in the art may be
used. In some embodiments, the 5' UTR RNA sequence is transcribed
from SEQ ID NOs: 1, 3, or 5. In some embodiments, the 5' UTR RNA
sequence comprises or consists of SEQ ID NOs: 2, 4, or 6. In some
embodiments, the 5' UTR RNA sequence is at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, or 99% identical to SEQ ID NOs: 2, 4,
or 6.
[0695] In some embodiments, the IL-15 sushi RNA comprises a 3' UTR.
In some embodiments, the 3' UTR follows the translation termination
codon. In some embodiments, the 3' UTR regulates polyadenylation,
translation efficiency, localization, or stability of the RNA. In
some embodiments, the 3' UTR RNA sequence is transcribed from SEQ
ID NO: 7. In some embodiments, the 3' UTR RNA sequence comprises or
consists of SEQ ID NO: 8. In some embodiments, the 3' UTR RNA
sequence is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
or 99% identical to SEQ ID NO: 8.
[0696] In some embodiments, the IL-15 sushi composition comprises
both a 5' UTR and a 3' UTR. In some embodiments, the IL-15 sushi
composition comprises only a 5' UTR. In some embodiments, the IL-15
sushi composition comprises only a 3' UTR.
[0697] In some embodiments, the IL-15 sushi RNA comprises a poly-A
tail. In some embodiments, the RNA comprises a poly-A tail of at
least about 25, at least about 30, at least about 50 nucleotides,
at least about 70 nucleotides, or at least about 100 nucleotides.
In some embodiments, the poly-A tail comprises 200 or more
nucleotides. In some embodiments, the poly-A tail comprises or
consists of SEQ ID NO: 78.
[0698] In some embodiments, the RNA comprises a 5' cap, a 5' UTR, a
nucleic acid encoding IL-15 sushi, a 3' UTR, and a poly-A tail, in
that order.
[0699] In some embodiments, the IL-15 sushi composition comprises a
DNA sequence comprising or consisting of a nucleic acid sequence
that is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%,
or 100% identical to SEQ ID NO: 25 and at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1,
3, or 5.
[0700] In some embodiments, the IL-15 sushi composition comprises
an RNA sequence that is, for example, transcribed from a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 25 and at least 70%, 75%, 80%, 85%, 90%,
95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or
5. The RNA may also be recombinantly produced. In some embodiments,
one or more uridine in the IFN.alpha. RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0701] In some embodiments, the IL-15 sushi composition comprises a
DNA sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 25 and at least 70%, 75%, 80%, 85%, 90%,
95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7.
[0702] In some embodiments, the IL-15 sushi composition comprises
an RNA sequence that is, for example, transcribed from a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 25 and at least 70%, 75%, 80%, 85%, 90%,
95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7. The RNA
may also be recombinantly produced. In some embodiments, one or
more uridine in the IFN.alpha. RNA is replaced by a modified
nucleoside as described herein. In some embodiments, the modified
nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0703] In some embodiments, the IL-15 sushi composition comprises a
DNA sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 25; at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5;
and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 7.
[0704] In some embodiments, the IL-15 sushi composition comprises
an RNA sequence that is, for example, transcribed from a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 25; at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5;
and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 7. In some embodiments, one or more
uridine in the IFN.alpha. RNA is replaced by a modified nucleoside
as described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.).
[0705] In some embodiments, the IL-15 sushi composition comprises
an RNA sequence comprising or consisting of a nucleic acid sequence
at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 26; at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 2, 4, or 6;
and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 8. In some embodiments, one or more
uridine in the IFN.alpha. RNA is replaced by a modified nucleoside
as described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U).
[0706] E. Granulocyte-Macrophage Colony-Stimulating Factor
(GM-CSF)
[0707] In some embodiments, the composition comprises a DNA
sequence encoding granulocyte-macrophage colony-stimulating factor
(GM-CSF) (e.g., SEQ ID NO: 27). In some embodiments, the DNA
sequence encoding GM-CSF is provided in SEQ ID NO: 28.
[0708] In some embodiments, the GM-CSF composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
encoding GM-CSF. In some embodiments, the RNA sequence is
transcribed from SEQ ID NO: 28. The RNA may also be recombinantly
produced. In some embodiments, the RNA sequence comprises or
consists of SEQ ID NO: 29. In some embodiments, the RNA sequence
comprises an RNA sequence with 70%, 75%, 80%, 85%, 90%, 95%, 96%,
97%, 98%, or 99% identity to SEQ ID NOs: 29.
[0709] In some embodiments, one or more uridine in the GM-CSF RNA
is replaced by a modified nucleoside as described herein. In some
embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, the RNA comprises
a modified nucleoside in place of each uridine. In some
embodiments, the modified nucleoside is N1-methyl-pseudouridine
(m.sup.1.psi.). In some embodiments, the GM-CSF RNA comprises an
altered nucleotide at the 5' end. In some embodiments, the RNA
comprises a 5' cap. Any 5' cap known in the art may be used. In
some embodiments, the 5' cap comprises a 5' to 5' triphosphate
linkage. In some embodiments, the 5' cap comprises a 5' to 5'
triphosphate linkage including thiophosphate modification. In some
embodiments, the 5' cap comprises a 2'-O or 3''-O-ribose-methylated
nucleotide. In some embodiments, the 5' cap comprises a modified
guanosine nucleotide or modified adenosine nucleotide. In some
embodiments, the 5' cap comprises 7-methylguanylate. In some
embodiments, the 5' cap is Cap0 or Cap1. Exemplary cap structures
include m7G(5')ppp(5')G, m7,2' O-mG(5')ppsp(5')G, m7G(5')ppp(5')2'
O-mG and m7,3' O-mG(5')ppp(5')2' O-mA.
[0710] In some embodiments, the GM-CSF RNA comprises a 5'
untranslated region (UTR). In some embodiments, the 5' UTR is
upstream of the initiation codon. In some embodiments, the 5' UTR
regulates translation of the RNA. In some embodiments, the 5' UTR
is a stabilizing sequence. In some embodiments, the 5' UTR
increases the half-life of RNA. Any 5' UTR known in the art may be
used. In some embodiments, the 5' UTR RNA sequence is transcribed
from SEQ ID NOs: 1, 3, or 5. In some embodiments, the 5' UTR RNA
sequence comprises or consists of SEQ ID NOs: 2, 4, or 6. In some
embodiments, the 5' UTR RNA sequence is at least 70%, 75%, 80%,
85%, 90%, 95%, 96%, 97%, 98%, or 99% identical to SEQ ID NOs: 2, 4,
or 6.
[0711] In some embodiments, the GM-CSF RNA comprises a 3' UTR. In
some embodiments, the 3' UTR follows the translation termination
codon. In some embodiments, the 3' UTR regulates polyadenylation,
translation efficiency, localization, or stability of the RNA. In
some embodiments, the 3' UTR RNA sequence is transcribed from SEQ
ID NO: 7. In some embodiments, the 3' UTR RNA sequence comprises or
consists of SEQ ID NO: 8. In some embodiments, the 3' UTR RNA
sequence is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%,
or 99% identical to SEQ ID NO: 8.
[0712] In some embodiments, the GM-CSF composition comprises both a
5' UTR and a 3' UTR. In some embodiments, the composition comprises
only a 5' UTR. In some embodiments, the composition comprises only
a 3' UTR.
[0713] In some embodiments, the GM-CSF RNA comprises a poly-A tail.
In some embodiments, the RNA comprises a poly-A tail of at least
about 25, at least about 30, at least about 50 nucleotides, at
least about 70 nucleotides, or at least about 100 nucleotides. In
some embodiments, the poly-A tail comprises 200 or more
nucleotides. In some embodiments, the poly-A tail comprises or
consists of SEQ ID NO: 78.
[0714] In some embodiments, the GM-CSF RNA comprises a 5' cap, a 5'
UTR, nucleotides encoding GM-CSF, a 3' UTR, and a poly-A tail, in
that order.
[0715] In some embodiments, the GM-CSF composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence that
is at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 28 and at least 70%, 75%, 80%, 85%,
90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1,
3, or 5.
[0716] In some embodiments, the GM-CSF composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NO: 28 and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%,
98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5. The RNA may
also be recombinantly produced. In some embodiments, one or more
uridine in the GM-CSF RNA is replaced by a modified nucleoside as
described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.).
[0717] In some embodiments, the GM-CSF composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 28 and at least 70%, 75%, 80%, 85%, 90%,
95%, 96%, 97%, 98%, 99%, or 100% identical to SEQ ID NO: 7.
[0718] In some embodiments, the GM-CSF composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NO: 28 and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%,
98%, 99%, or 100% identical to SEQ ID NO: 7. The RNA may also be
recombinantly produced. In some embodiments, one or more uridine in
the GM-CSF RNA is replaced by a modified nucleoside as described
herein. In some embodiments, the modified nucleoside replacing
uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U). In some embodiments,
the RNA comprises a modified nucleoside in place of each uridine.
In some embodiments, the modified nucleoside is
N1-methyl-pseudouridine (m.sup.1.psi.).
[0719] In some embodiments, the GM-CSF composition comprises a DNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 28; at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5;
and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 7.
[0720] In some embodiments, the composition comprises an RNA
sequence that is, for example, transcribed from a DNA sequence
comprising or consisting of a nucleic acid sequence at least 70%,
75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical to
SEQ ID NO: 28; at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%,
98%, 99%, or 100% identical to SEQ ID NOs: 1, 3, or 5; and at least
70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical
to SEQ ID NO: 7. The RNA may also be recombinantly produced. In
some embodiments, one or more uridine in the GM-CSF RNA is replaced
by a modified nucleoside as described herein. In some embodiments,
the modified nucleoside replacing uridine is pseudouridine (.psi.),
N1-methyl-pseudouridine (m.sup.1.psi.) or 5-methyl-uridine
(m.sup.5U). In some embodiments, the RNA comprises a modified
nucleoside in place of each uridine. In some embodiments, the
modified nucleoside is N1-methyl-pseudouridine (m.sup.1.psi.).
[0721] In some embodiments, the GM-CSF composition comprises an RNA
sequence comprising or consisting of a nucleic acid sequence at
least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100%
identical to SEQ ID NO: 29; at least 70%, 75%, 80%, 85%, 90%, 95%,
96%, 97%, 98%, 99%, or 100% identical to SEQ ID NOs: 2, 4, or 6;
and at least 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or
100% identical to SEQ ID NO: 8. In some embodiments, one or more
uridine in the GM-CSF RNA is replaced by a modified nucleoside as
described herein. In some embodiments, the modified nucleoside
replacing uridine is pseudouridine (.psi.), N1-methyl-pseudouridine
(m.sup.1.psi.) or 5-methyl-uridine (m.sup.5U).
[0722] F. Modifications
[0723] Each of the RNAs and compositions described herein may be
modified in any way known to those of skill in the art. In some
embodiments, the modifications are "ModA" or "ModB" modified as
described herein.
[0724] In some embodiments, one or more uridine in the RNA is
replaced by a modified nucleoside. In some embodiments, the
modified nucleoside is a modified uridine.
[0725] In some embodiments, the modified uridine replacing uridine
is pseudouridine (.psi.), N1-methyl-pseudouridine (m1.psi.), or
5-methyl-uridine (m5U).
[0726] In some embodiments, one or more cytosine, adenine or
guanine in the RNA is replaced by modified nucleobase(s). In one
embodiment, the modified nucleobase replacing cytosine is
5-methylcytosine (m.sup.5C). In another embodiment, the modified
nucleobase replacing adenine is N.sup.6-methyladenine (m.sup.6A).
In another embodiment, any other modified nucleobase known in the
art for reducing the immunogenicity of the molecule can be
used.
[0727] The modified nucleoside replacing one or more uridine in the
RNA may be any one or more of 3-methyl-uridine (m.sup.3U),
5-methoxy-uridine (mo.sup.5U), 5-aza-uridine, 6-aza-uridine,
2-thio-5-aza-uridine, 2-thio-uridine (s.sup.2U), 4-thio-uridine
(s.sup.4U), 4-thio-pseudouridine, 2-thio-pseudouridine,
5-hydroxy-uridine (ho.sup.5U), 5-aminoallyl-uridine, 5-halo-uridine
(e.g., 5-iodo-uridineor 5-bromo-uridine), uridine 5-oxyacetic acid
(cmo.sup.5U), uridine 5-oxyacetic acid methyl ester (mcmo.sup.5U),
5-carboxymethyl-uridine (cm.sup.5U), 1-carboxymethyl-pseudouridine,
5-carboxyhydroxymethyl-uridine (chm.sup.5U),
5-carboxyhydroxymethyl-uridine methyl ester (mchm.sup.5U),
5-methoxycarbonylmethyl-uridine (mcm.sup.5U),
5-methoxycarbonylmethyl-2-thio-uridine (mcm.sup.5s.sup.2U),
5-aminomethyl-2-thio-uridine (nm.sup.5s.sup.2U),
5-methylaminomethyl-uridine (mnm.sup.5U), 1-ethyl-pseudouridine,
5-methylaminomethyl-2-thio-uridine (mnm.sup.5s.sup.2U),
5-methylaminomethyl-2-seleno-uridine (mnm.sup.5se.sup.2U),
5-carbamoylmethyl-uridine (ncm.sup.5U),
5-carboxymethylaminomethyl-uridine (cmnm.sup.5U),
5-carboxymethylaminomethyl-2-thio-uridine (cmnm.sup.5s.sup.2U),
5-propynyl-uridine, 1-propynyl-pseudouridine,
5-taurinomethyl-uridine (.tau.m.sup.5U),
1-taurinomethyl-pseudouridine, 5-taurinomethyl-2-thio-uridine
(.tau.m5s2U), 1-taurinomethyl-4-thio-pseudouridine),
5-methyl-2-thio-uridine (m.sup.5s.sup.2U),
1-methyl-4-thio-pseudouridine (m.sup.1s.sup.4.psi.)
4-thio-1-methyl-pseudouridine, 3-methyl-pseudouridine
(m.sup.3.psi.), 2-thio-1-methyl-pseudouridine,
1-methyl-1-deaza-pseudouridine,
2-thio-1-methyl-1-deaza-pseudouridine, dihydrouridine (D),
dihydropseudouridine, 5,6-dihydrouridine, 5-methyl-dihydrouridine
(m.sup.5D), 2-thio-dihydrouridine, 2-thio-dihydropseudouridine,
2-methoxy-uridine, 2-methoxy-4-thio-uridine,
4-methoxy-pseudouridine, 4-methoxy-2-thio-pseudouridine,
N1-methyl-pseudouridine, 3-(3-amino-3-carboxypropyl)uridine
(acp.sup.3U), 1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine
(acp.sup.3.psi.), 5-(isopentenylaminomethyl)uridine (inm.sup.5U),
5-(isopentenylaminomethyl)-2-thio-uridine (inm.sup.5s.sup.2U),
.alpha.-thio-uridine, 2'-O-methyl-uridine (Um),
5,2'-O-dimethyl-uridine (m.sup.5Um), 2'-O-methyl-pseudouridine
(.psi.m), 2-thio-2'-O-methyl-uridine (s.sup.2Um),
5-methoxycarbonylmethyl-2'-O-methyl-uridine (mcm.sup.5Um),
5-carbamoylmethyl-2'-O-methyl-uridine (ncm.sup.5Um),
5-carboxymethylaminomethyl-2'-O-methyl-uridine (cmnm.sup.5Um),
3,2'-O-dimethyl-uridine (m.sup.3Um),
5-(isopentenylaminomethyl)-2'-O-methyl-uridine (inm.sup.5Um),
1-thio-uridine, deoxythymidine, 2'-F-ara-uridine, 2'-F-uridine,
2'-OH-ara-uridine, 5-(2-carbomethoxyvinyl) uridine,
5-[3-(1-E-propenylamino)uridine, or any other modified uridine
known in the art.
[0728] G. Combination Compositions
[0729] In some embodiments, the invention comprises a composition
comprising more than one RNA as described herein. In some
embodiments, the composition comprises two RNAs. In some
embodiments, the composition comprises three RNAs. In some
embodiments, the composition comprises four RNAs. In some
embodiments, the composition comprises five RNAs. In some
embodiments, any or all of the RNAs encoding IL-2, IL12sc, IL-15
sushi, GM-CSF, or IFN.alpha. may be replaced by IL-2, IL12sc, IL-15
sushi, GM-CSF, and/or IFN.alpha. polypeptides, e.g., in any of the
compositions and formulations comprising these RNAs described
herein.
[0730] In some embodiments, the modified or unmodified RNAs
encoding IL-2, IL12sc, IL-15 sushi, GM-CSF, and/or IFN.alpha. may
be replaced by modified or unmodified polycistronic RNAs encoding
two or more polypeptides selected from IL-2, IL12sc, IL15 sushi,
GM-CSF and IFN.alpha. polypeptides, e.g., in any of the
compositions and formulations comprising these RNAs described
herein.
[0731] Any of the combination compositions may further comprise an
excipient or diluent. The excipient or diluent may be
pharmaceutically acceptable for administration to a subject.
[0732] In some embodiments, a combination composition comprises
RNAs with the same modifications. In some embodiments, a
combination composition comprises RNAs with different
modifications. In some embodiments, a combination composition
comprises RNAs with ModA modification. In some embodiments, a
combination composition comprises RNAs with ModB modification. In
some embodiments, a combination composition comprises RNAs with
ModA and ModB modifications.
[0733] In some embodiments, a composition comprising DNA or RNA
encoding IL-2 and one or more of a DNA or RNA encoding IL-12sc,
IFN.alpha., IL-15 sushi, and GM-CSF is encompassed. In some
embodiments, the composition comprises a DNA or RNA encoding IL-2
or codon-optimized IL-2 (SEQ ID NOs: 10-13) and one or more of a
DNA or RNA encoding IL-12sc or optimized IL-12sc (SEQ ID Nos:
15-18), IFN.alpha. or optimized IFN.alpha. (SEQ ID Nos: 20-23),
IL-15 sushi (SEQ ID NOs: 25-26), and GM-CSF (SEQ ID NOs: 28-29), as
described herein. In some embodiments, one or more uridine in the
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, one or more of
the RNAs in the composition further comprises a 5' cap, a 5' UTR, a
3' UTR, and a poly-A tail as described herein in the composition
section.
[0734] In some embodiments, a composition comprising DNA or RNA
encoding IL-12sc and one or more of a DNA or RNA encoding IL-2,
IFN.alpha., IL-15 sushi, and GM-CSF is encompassed. In some
embodiments, the composition comprises a DNA or RNA encoding
IL-12sc or codon-optimized IL-12sc (SEQ ID NOs: 15-18) and one or
more of a DNA or RNA encoding IL-2 or optimized IL-2 (SEQ ID NOs:
10-13), IFN.alpha. or optimized IFN.alpha. (SEQ ID NOs: 20-23),
IL-15 sushi (SEQ ID NOs: 25-26), and GM-CSF (SEQ ID NOs: 28-29), as
described herein. In some embodiments, one or more uridine in the
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U).
[0735] In some embodiments, one or more of the RNAs in the
composition further comprises a 5' cap, a 5' UTR, a 3' UTR, and a
poly-A tail, as described herein in the composition section.
[0736] In some embodiments, a composition comprising DNA or RNA
encoding IFN.alpha. and one or more of a DNA or RNA encoding IL-2,
IL-12sc, IL-15 sushi, and GM-CSF is encompassed. In some
embodiments, the composition comprises a DNA or RNA encoding
IFN.alpha. or codon-optimized IFN.alpha. (SEQ ID NOs: 20-23) and
one or more of a DNA or RNA encoding IL-12sc or optimized IL-12sc
(SEQ ID NOs: 15-18), IL-2 or optimized IL-2 (SEQ ID NOs: 10-13),
IL-15 sushi (SEQ ID NOs: 25-26), and GM-CSF (SEQ ID NOs: 28-29), as
described herein. In some embodiments, one or more uridine in the
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, one or more of
the RNAs in the composition further comprises a 5' cap, a 5' UTR, a
3' UTR, and a poly-A tail as described herein in the composition
section.
[0737] In some embodiments, a composition comprising DNA or RNA
encoding IL-15 sushi and one or more of a DNA or RNA encoding IL-2,
IL-12sc, IFN.alpha., and GM-CSF is encompassed. In some
embodiments, the composition comprises a DNA or RNA encoding IL-15
sushi (SEQ ID NOs: 25-26) and one or more of a DNA or RNA encoding
IL-12sc or optimized IL-12sc (SEQ ID NOs: 15-18), IFN.alpha. or
optimized IFN.alpha. (SEQ ID NOs: 20-23), IL-2 or optimized IL-2
(SEQ ID NOs: 10-13), and GM-CSF (SEQ ID NOs: 28-29), as described
herein. In some embodiments, one or more uridine in the RNA is
replaced by a modified nucleoside as described herein. In some
embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, one or more of
the RNAs in the composition further comprises a 5' cap, a 5' UTR, a
3' UTR, and a poly-A tail as described herein in the composition
section.
[0738] In some embodiments, a composition comprising DNA or RNA
encoding GM-CSF and one or more of a DNA or RNA encoding IL-2,
IL-12sc, IFN.alpha., and IL-15 sushi is encompassed. In some
embodiments, the composition comprises a DNA or RNA encoding GM-CSF
(SEQ ID NOs: 28-29) and one or more of a DNA or RNA encoding
IL-12sc or optimized IL-12sc (SEQ ID NOs: 15-18), IFN.alpha. or
optimized IFN.alpha. (SEQ ID NOs: 20-23), IL-2 or optimized IL-2
(SEQ ID NOs: 10-13), and IL-15 sushi (SEQ ID NOs: 25-26), as
described herein. In some embodiments, one or more uridine in the
RNA is replaced by a modified nucleoside as described herein. In
some embodiments, the modified nucleoside replacing uridine is
pseudouridine (.psi.), N1-methyl-pseudouridine (m.sup.1.psi.) or
5-methyl-uridine (m.sup.5U). In some embodiments, one or more of
the RNAs in the composition further comprises a 5' cap, a 5' UTR, a
3' UTR, and a poly-A tail as described herein in the composition
section.
[0739] In some embodiments, the composition comprises GM-CSF, IL-2,
and IL-12sc RNA. In some embodiments, the composition is modified,
for example, as ModA or ModB. In some embodiments, the IL-12sc RNA
is optimized as shown in SEQ ID NO: 18.
[0740] In some embodiments, the composition comprises GM-CSF, IL-15
sushi, and IL-12sc RNA. In some embodiments, the composition is
modified, for example, as ModA or ModB. In some embodiments, the
IL-12sc RNA is optimized as shown in SEQ ID NO: 18.
[0741] In some embodiments, the composition comprises GM-CSF, IL-2,
IL-12sc, and IFN.alpha. RNA. In some embodiments, the composition
is modified, for example, as ModA or ModB. In some embodiments, the
IL-12sc RNA and IFN.alpha. RNA is optimized as shown in SEQ ID NOs:
18 and 23, respectively.
[0742] In some embodiments, the composition comprises GM-CSF, IL-15
sushi, IL-12sc, and IFN.alpha. RNA. In some embodiments, the
composition is modified, for example, as ModA or ModB. In some
embodiments, the IL-12sc RNA and IFN.alpha. RNA is optimized as
shown in SEQ ID NOs: 18 and 23, respectively.
[0743] In some embodiments, the composition comprises GM-CSF, IL-15
sushi, IL-12sc, and IFN.alpha. RNA, wherein the RNAs comprise or
consist of the nucleotides shown in SEQ ID Nos: 18 (IL-12sc), 23
(IFN.alpha.), 26 (IL-15 sushi), or 29 (GM-CSF). In some
embodiments, the composition is modified, for example, as ModA or
ModB.
[0744] In some embodiments, combinations of RNA are administered as
a 1:1, 1:1:1, or 1:1:1:1 ratio based on equal RNA mass. For
example, 20 .mu.g of IL15-sushi, 20 .mu.g of IL-12sc, 20 .mu.g of
IFN.alpha.2b and 20 .mu.g GM-CSF. In some embodiments, the ratio is
adjusted so that different ratios by mass are administered, for
example, 1:10:1:10 ratio (20 .mu.g, 200 .mu.g, 20 .mu.g, 200
.mu.g). Likewise, in some embodiments, for example, a ratio of
1:2:3:4 (20 .mu.g, 40 .mu.g, 60 .mu.g, 80 .mu.g) is used.
Alternatively, rather than basing the ratio on the mass of the RNA,
the ratio may be based on the molarity of the RNA.
[0745] In some embodiments, a mixture of RNAs is administered with
an equal ratio of each RNA of the mixture.
[0746] In some embodiments, a mixture of RNAs is administered with
an unequal ratio of each RNA of the mixture. In some embodiments,
one or more RNAs are administered at a ratio that is 1, 2, 3, 4, 5,
6, 7, 8, 9, or 10 times greater than another RNA in the mixture. In
some embodiments, one or more RNAs are administered at a ratio that
is 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 times less than another RNA in
the mixture.
[0747] In some embodiments, the compositions described herein may
be a medical preparation. In some embodiments, the medical
preparation comprises a kit, wherein the included RNAs may be in
the same or separate vials. In some embodiments, the medical
preparation further comprising instructions for use of the
composition for treating or preventing a solid tumor.
[0748] In some embodiments, a kit comprising the compositions
described herein is provided, wherein the included RNAs may be in
the same or separate vials. In some embodiments, the kit further
comprising instructions for use of the composition for treating or
preventing a solid tumor.
[0749] H. Effect of IFN.alpha. Addition to Modified mRNA
Treatment
[0750] RNA can activate the immune system through stimulating
various pattern recognition receptors (PRR) leading to production
of Type I interferons (like IFN.alpha.). The incorporation of
various modified nucleotides, or other alterations like reducing
the amount of dsRNA administered, can reduce the immune stimulatory
effects of RNA. Unexpectedly, as described in the Examples,
inclusion of nucleotide-modified and dsRNA-reduced mRNA encoding
interferon alpha improved anti-tumor activity relative to that of
mRNA that was not nucleotide modified and dsRNA-reduced. The
addition of mRNA encoding interferon alpha restored a portion of
the immune stimulatory effects removed by the inclusion of modified
nucleotides and the dsRNA purification.
[0751] In some embodiments, RNA encoding IFN (in any form or
subtype) is provided, wherein the IFN RNA is altered to have
reduced immunogenicity compared to un-altered RNA. In certain
embodiments, the administration of this IFN improves the anti-tumor
response of non-IFN encoding RNA. In some embodiments, RNA encoding
IFN.alpha. improves the anti-tumor response of other RNAs, so long
as the other RNAs have been altered to reduce immunogenicity. In
one embodiment, the alteration to reduce immunogenicity is a
reduction in the amount of dsRNA. In some aspects, the alteration
to reduce immunogenicity is the replacement of one or more uridines
with a modified nucleoside. In some aspects, the alteration to
reduce immunogenicity is both a reduction in the amount of dsRNA
and the replacement of one or more uridines with modified
nucleoside. In some embodiments, the IFN is IFN.alpha..
[0752] In some embodiments, IFN RNA improves the anti-tumor
response of modified RNAs. In some embodiments, IFN RNA improves
the anti-tumor response of RNAs comprising modified nucleotides. In
some embodiments, IFN RNA improves the anti-tumor response of mRNAs
comprising pseudouridine. In some embodiments, IFN RNA improves the
anti-tumor response of RNAs with ModB modifications.
[0753] In some embodiments, IFN RNA improves the anti-tumor
response of RNAs of IL-2 (SEQ ID NO: 12 or 13), IL-12sc (SEQ ID NO:
17 or 18), IL-15 sushi (SEQ ID NO: 26) or GM-CSF (SEQ ID NO: 29).
In some embodiments, the RNAs comprise ModB modifications.
[0754] In some embodiments, the IFN is IFN.alpha..
[0755] In some embodiments, the IFN RNA construct is SEQ ID NO: 22
or 23.
III. Methods and Uses
[0756] Any of the RNAs, compositions, medical preparations and
combination compositions described herein may be administered to a
subject to treat cancer or a solid tumor. In some embodiments, the
cancer is a solid tumor. In some embodiments, the solid tumor is an
abnormal mass of tissue that does not contain cysts or liquid
areas. In some embodiments, the solid tumor may be benign or
malignant. In some embodiments, the solid tumor is a pre-cancerous
lesion. In some embodiments, the solid tumor occurs in lung, colon,
ovary, cervix, uterus, peritoneum, testicles, penis, tongue, lymph
node, pancreas, bone, breast, prostate, soft tissue, connective
tissue, kidney, liver, brain, thyroid, or skin.
[0757] In some embodiments, the solid tumor is a sarcoma,
carcinoma, or lymphoma. In some embodiments, the solid tumor is an
epithelial tumor, Hodgkin lymphoma (HL), non-Hodgkin lymphoma,
prostate tumor, ovarian tumor, renal cell tumor, gastrointestinal
tract tumor, hepatic tumor, colorectal tumor, tumor with
vasculature, mesothelioma tumor, pancreatic tumor, breast tumor,
sarcoma tumor, lung tumor, colon tumor, brain tumor, melanoma
tumor, basal cell carcinoma, squamous cell carcinoma, small cell
lung tumor, neuroblastoma tumor, testicular tumor, carcinoma tumor,
adenocarcinoma tumor, glioma tumor, seminoma tumor, retinoblastoma,
or osteosarcoma tumor. In some embodiments, the solid tumor is a
precancerous lesion such as actinic keratosis.
[0758] In some embodiments, the RNA compositions may be delivered
via injection into (e.g., intra-tumorally) or near (peri-tumorally)
the tumor. In some embodiments, the RNA compositions may be
delivered at or near the site of a tumor removal.
[0759] In some embodiments, the RNA compositions may be delivered
via a topical solution, ointment, or cream.
[0760] In some embodiments, the RNA compositions may be delivered
via a virus. In some embodiments, the RNA compositions may be
delivered by infection with a virus encoding the RNA compositions,
such as an oncolytic virus. In some embodiments, the RNA
compositions may be delivered by an oncolytic virus.
[0761] In some embodiments, more than one administration is
delivered. In some embodiments, a catheter is placed into or near
the site of the tumor for multiple administrations. In some
embodiments, a catheter is placed at the site of removal of a tumor
for multiple administrations.
[0762] In some embodiments, the subject is human. In some
embodiments, the subject is a non-human mammal such as a dog, cat,
mouse, rat, rabbit, sheep, cattle, horse and pig.
[0763] In some embodiments, RNA compositions are combined with
another therapy. In some embodiments, RNA compositions are combined
with more than one other therapy. In some embodiments, RNA
compositions are combined in a multi-modal therapy.
[0764] In some embodiments, the other therapy is surgery to excise,
resect, or debulk the tumor. In some embodiments, therapeutic RNA
compositions are administered during a surgery to excise, resect,
or debulk the tumor.
[0765] In some embodiments, the other therapy is radiotherapy. In
some embodiments, the radiotherapy is external beam radiation
therapy or particle beam radiation. In some embodiments, the
radiotherapy is brachytherapy involving temporary or permanent
implantation of radioactive isotopes directly into the tumor via
catheter or large bore needle. In some embodiments, the radioactive
isotope is 137Cesium, 192Iridium, or radioactive iodine. In some
embodiments, the radiotherapy is radioisotope preparations
administered intravenously. In some embodiments, the radioisotope
preparations are radioactive iodine (131I) Strontium (89Sr), or
Samarium (153Sm).
[0766] In some embodiments, the other therapy is chemotherapy. In
some embodiments, the chemotherapy is an alkylating agent, an
antimetabolite, an anti-microtubule agent, a topoisomerase
inhibitor, or a cytotoxic antibody.
[0767] In some embodiments, the chemotherapy comprises
anti-invasion agents (e.g., metalloproteinase inhibitors like
marimastat and inhibitors of urokinase plasminogen activator
receptor function). In some embodiments, the chemotherapy comprises
inhibitors of growth factor function (e.g., platelet derived growth
factor and hepatocyte growth factor), growth factor antibodies, or
growth factor receptor antibodies, (e.g., anti-erbb2 antibody
trastuzumab [Herceptin.TM.] and the anti-erbb1 antibody
Cetuximab.TM.). In some embodiments, the chemotherapy is a farnesyl
transferase inhibitor. In some embodiments, the chemotherapy is a
tyrosine kinase inhibitor such as inhibitors of the epidermal
growth factor family (e.g., EGFR family tyrosine kinase inhibitors
such as gefitinib (Iressa.TM.), erlotinib (Tarceva.TM.), and
Canertinib (CI 1033), or a serine/threonine kinase inhibitor).
[0768] In some embodiments, the chemotherapy comprises
antiproliferative/antineoplastic drugs such as antimetabolites
(e.g., antifolates like methotrexate, fluoropyrimidines like
5-fluorouracil, tegafur, purine and adenosine analogues, cytosine
arabinoside); antitumour antibiotics (e.g., anthracyclines like
adriamycin, bleomycin, doxorubicin, daunomycin, epirubicin and
idarubicin, mitomycin-C, dactinomycin, mithramycin); platinum
derivatives (e.g., cisplatin, carboplatin); alkylating agents
(e.g., nitrogen mustard, melphalan, chlorambucil, busulphan,
cyclophosphamide, ifosfamide, nitrosoureas, thiotepa); antimitotic
agents (e.g., vinca alkaloids like vincristine, vinblastine,
vindesine, vinorelbine, and taxoids like taxol, taxotere);
topoisomerase inhibitors (e.g., epipodophyllotoxins like etoposide
and teniposide, amsacrine, topotecan, camptothecin and also
irinotecan); or thymidylate synthase inhibitors (e.g.,
raltitrexed).
[0769] In some embodiments, the chemotherapy is an antibody-drug
conjugate (ADC). In some embodiments, the ADC is an antibody linked
to a cytotoxic (anticancer) drug. In some embodiments, the ADC
allows targeted delivery of cytotoxic drugs to tumor cells. In some
embodiments, the ADC allows preferential deliver of cytotoxic drugs
to tumor cells versus normal tissue.
[0770] In some embodiments, the chemotherapy is combination
chemotherapy with a combination of different agents. In some
embodiments, the combination comprises different agents that have
different mechanisms of action and/or different, non-overlapping
toxicities.
[0771] In some embodiments, the other therapy is an immune
stimulator or immunotherapy, such as, for example, a checkpoint
modulator/inhibitor. Checkpoint modulators/inhibitors are well
known in the art to prevent the host immune system from attacking
itself, and include, for example, CTLA-4, PD1, PDL1, GITR, OX40,
LAG-3, and TIM-3. In some embodiments, the immune stimulator,
immunotherapy, or checkpoint modulator/inhibitor is a monoclonal
antibody. In some embodiments, the monoclonal antibody is an
antibody against PD1, PDL1, CTLA-4, LAG3, OX40, CD40, CD40L, 41BB,
41BBL, GITR, CD3, CD28, CD38, or TGFbeta. In some embodiments, the
monoclonal antibody is a bispecific antibody. In some embodiments,
the immune stimulator is a cell-based immunotherapy. In some
embodiments, the immune stimulator is a cytokine or chemokine. In
some embodiments, the immune stimulator is a cancer vaccine. As a
wide range of immune stimulators would be known to scientists and
clinicians skilled in the art, the invention is not limited to a
specific combination with a particular immune stimulator.
[0772] In some instances, any of the RNAs, RNA compositions,
medical preparations, and RNA combination compositions described
herein may be administered in combination with an immune
stimulator, immunotherapy, or checkpoint modulator. In some
instances, the RNAs, RNA compositions, and RNA combination
compositions described herein are administered in combination with
an antibody to a subject to treat cancer, including solid tumors.
In some embodiments, the antibody is an anti-PD1 antibody, an
anti-CTLA4 antibody, or a combination of an anti-PD1 antibody and
anti-CTLA4 antibody. In some embodiments, the antibody is a
multi-specific antibody such as, for example, a tri-specific or
bi-specific antibody.
[0773] In some embodiments, the anti-PD1 antibody is a chimeric,
humanized or human antibody. In some embodiments, the anti-PD-1
antibody is isolated and/or recombinant. Examples of anti-PD-1
antibodies are nivolumab, pembrolizumab, cemiplimab, MEDI0608
(formerly AMP-514; see, e.g., WO 2012/145493 and U.S. Pat. No.
9,205,148), PDR001 (see, e.g., WO 2015/112900), PF-06801591 (see,
e.g., WO 2016/092419), BGB-A317 (see, e.g., WO 2015/035606).
[0774] In some embodiments, the anti-PD-1 antibody is one of those
disclosed in WO 2015/112800 (such as those referred to as H1M7789N,
H1M7799N, H1M7800N, H2M7780N, H2M7788N, H2M7790N, H2M7791N,
H2M7794N, H2M7795N, H2M7796N, H2M7798N, H4H9019P, H4xH9034P2,
H4xH9035P2, H4xH9037P2, H4xH9045P2, H4xH9048P2, H4H9057P2,
H4H9068P2, H4xH9119P2, H4xH9120P2, H4xH9128P2, H4xH9135P2,
H4xH9145P2, H4xH8992P, H4xH8999P and H4xH9008P in Table 1 of the
PCT publication, and those referred to as H4H7798N, H4H7795N2,
H4H9008P and H4H9048P2 in Table 3 of the PCT publication). The
disclosure of WO 2015/112800 is incorporated by reference herein in
its entirety. For example, the antibodies disclosed in WO
2015/112800 and related antibodies, including antibodies and
antigen-binding fragments having the CDRs, VH and VL sequences, or
heavy and light chain sequences disclosed in that PCT publication,
as well as antibodies and antigen-binding fragments binding to the
same PD-1 epitope as the antibodies disclosed in that PCT
publication, can be used in conjunction with the RNA compositions
of the present invention to treat and/or prevent cancer.
[0775] In related embodiments, the anti-PD-1 antibody may comprise
the heavy and light chain amino acid sequences shown below as SEQ
ID NOs: 79 and 80, respectively; the VH and VL sequences in SEQ ID
NOs: 87 and 88 (shown in italics), or one or more (e.g., all six)
CDRs in SEQ ID NOs: 79 and 80 (shown in bold boxes). In some
embodiments, an antibody comprising the following CDRs is
encompassed:
TABLE-US-00007 (SEQ ID NO: 81) HCDR1 = GFTFSNFG (SEQ ID NO: 82)
HCDR2 = ISGGGRDT (SEQ ID NO: 83) HCDR3 = VKWGNIYFDY (SEQ ID NO: 84)
LCDR1 = LSINTF (SEQ ID NO: 85) LCDR2 = AAS (SEQ ID NO: 86) LCDR3 =
QQSSNTPFT.
[0776] An exemplary antibody comprising a heavy chain comprising
the VH and VL sequences in SEQ ID NOs: 87 and 88 (shown in italics)
is the fully human anti-PD-1 antibody known as REGN2810
(cemiplimab).
TABLE-US-00008 Anti-PD-1 Mab heavy chain (SEQ ID NO: 79)
##STR00014## ##STR00015## KGPSVFPLAP CSRSTSESTA ALGCLVKDYF
PEPVTVSWNS GALTSGVHTF PAVLQSSGLY SLSSVVTVPS SSLGTKTYTC NVDHKPSNTK
VDKRVESKYG PPCPPCPAPE FLGGPSVFLF PPKPKDTLMI SRTPEVTCVV VDVSQEDPEV
QFNWYVDGVE VHNAKTKPRE EQFNSTYRVV SVLTVLHQDW LNGKEYKCKV SNKGLPSSIE
KTISKAKGQP REPQVYTLPP SQEEMTKNQV SLTCLVKGFY PSDIAVEWES NGQPENNYKT
TPPVLDSDGS FFLYSRLTVD KSRWQEGNVF SCSVMHEALH NHYTQKSLSL SLGK (SEQ ID
NO: 81) HCDR1 = GFTFSNFG (SEQ ID NO: 82) HCDR2 = ISGGGRDT (SEQ ID
NO: 83) HCDR3 = VKWGNIYFDY Anti-PD-1 Mab light chain (SEQ ID NO:
80) ##STR00016## ##STR00017## SDEQLKSGTA SVVCLLNNFY PREAKVQWKV
DNALQSGNSQ ESVTEQDSKD STYSLSSTLT LSKADYEKHK VYACEVTHQG LSSPVTKSFN
RGEC (SEQ ID NO: 84) LCDR1 = LSINTF (SEQ ID NO: 85) LCDR2 = AAS
(SEQ ID NO: 86) LCDR3 = QQ SSNTPFT
[0777] In some embodiments, the RNAs, RNA compositions, and RNA
combination compositions may be delivered via injection into the
tumor (e.g., intratumorally), near the tumor (peri-tumorally), or
near the site of a tumor removal, and the antibody may be delivered
in the same manner or systemically, such as, for example, enteral
or parenteral, including, via injection, infusion, and
implantation. "Administered in combination" includes simultaneous
or sequential administration. If sequential, administration can be
in any order and at any appropriate time interval known to those of
skill in the art.
[0778] In some embodiments, the other therapy is hormonal therapy.
In some embodiments, the hormonal therapy is antiestrogen drugs for
treatment of breast cancer or anti-androgen drugs for treating
prostate cancer. Example agents include antiestrogens (e.g.,
tamoxifen, toremifene, raloxifene, droloxifene, iodoxyfene),
estrogen receptor down regulators (e.g., fulvestrant), progestogens
(e.g., megestrol acetate), aromatase inhibitors (e.g., anastrozole,
letrazole, vorazole, exemestane), antiprogestogens, antiandrogens
(e.g., flutamide, nilutamide, bicalutamide, cyproterone acetate),
LHRH agonists and antagonists (e.g., goserelin acetate, luprolide,
buserelin), and inhibitors of 5-alpha-reductase (e.g.,
finasteride).
[0779] In some embodiments, the other therapy is a targeted
therapy. In some embodiments, the targeted therapy is a kinase
inhibitor. In some embodiments, the targeted therapy is one that
inhibits activity of a gene product of a proto-oncogene. In some
embodiments, the targeted therapy is an anti-angiogenic agent. In
some embodiments, the targeted therapy is one directed to modulate
activity of VEGF, BCR-ABL, BRAF, EGFR, c-Met, MEK, ERK, mTOR, or
ALK.
[0780] In some embodiments, the other therapy is stem cell
transplantation.
[0781] In some embodiments, therapeutic RNA compositions are
delivered at the same time as another therapy.
[0782] In some embodiments, therapeutic RNA compositions are
delivered before another therapy.
[0783] In some embodiments, therapeutic RNA compositions are
delivered after another therapy.
[0784] In some embodiments, therapeutic RNA compositions are
delivered directly into the tumor, or near the tumor or the site of
tumor removal together with another therapy. In some embodiments,
therapeutic RNA compositions are delivered directly into the tumor,
or near the tumor or site of tumor removal while another agent is
delivered systemically.
IV. Pharmaceutical Formulations
[0785] In some embodiments, any of the DNAs, RNAs, and compositions
described herein are pharmaceutical formulations. In some
embodiments, the pharmaceutical formulations comprise a diluent,
excipient, or other pharmaceutically acceptable carrier. Thus,
provided herein are pharmaceutical compositions comprising the DNA,
RNA, compositions, or combinations thereof provided herein, and a
pharmaceutically acceptable excipient. In certain embodiments, the
pharmaceutically acceptable excipient is an aqueous solution. In
certain embodiments, the aqueous solution is a saline solution. As
used herein, pharmaceutically acceptable excipients are understood
to be sterile. In some embodiments, a pharmaceutical composition is
administered in the form of a dosage unit. For example, in certain
embodiments, a dosage unit is in the form of a tablet, capsule,
implantable device, or a bolus injection.
[0786] In some embodiments, the pharmaceutical compositions
provided herein may additionally contain other adjunct components
conventionally found in pharmaceutical compositions. For example,
the compositions may contain additional, compatible,
pharmaceutically-active materials such as, for example,
antipruritics, astringents, local anesthetics or anti-inflammatory
agents. The compositions may also contain additional, compatible,
pharmaceutically-inactive materials such as excipients, diluents,
and carriers.
[0787] Certain pharmaceutical compositions for injection are
suspensions, solutions or emulsions in oily or aqueous vehicles,
and may contain formulatory agents such as suspending, stabilizing
and/or dispersing agents. Certain solvents suitable for use in
pharmaceutical compositions for injection include, but are not
limited to, lipophilic solvents and fatty oils, such as sesame oil,
synthetic fatty acid esters, such as ethyl oleate or triglycerides,
and liposomes. Aqueous injection suspensions may contain substances
that increase the viscosity of the suspension, such as sodium
carboxymethyl cellulose, sorbitol, or dextran. Optionally, such
suspensions may also contain suitable stabilizers or agents that
increase the solubility of the pharmaceutical agents to allow for
the preparation of highly concentrated solutions.
[0788] Lipid moieties may be used to deliver the RNAs provided
herein. In one method, the RNA is introduced into preformed
liposomes or lipoplexes made of mixtures of cationic lipids and
neutral lipids. In another method, RNA complexes with mono- or
poly-cationic lipids are formed without the presence of a neutral
lipid. In certain embodiments, a lipid moiety is selected to
increase distribution of a pharmaceutical agent to a particular
cell or tissue.
[0789] In some embodiments, a pharmaceutical composition provided
herein comprises a polyamine compound or a lipid moiety complexed
with the DNA or RNA provided herein.
[0790] In some embodiments, a pharmaceutical composition provided
herein comprises a delivery system. Examples of delivery systems
include, but are not limited to, liposomes and emulsions. Certain
delivery systems are useful for preparing certain pharmaceutical
compositions including those comprising hydrophobic compounds. In
certain embodiments, certain organic solvents such as
dimethylsulfoxide are used.
[0791] Certain pharmaceutical compositions for injection are
presented in unit dosage form, e.g., in ampoules or in multi-dose
containers. In certain embodiments, a pharmaceutical composition
provided herein comprises a RNA or combination of RNAs in a
therapeutically effective amount. In certain embodiments, the
therapeutically effective amount is sufficient to treat or prevent
cancer in the subject being treated.
[0792] The following clauses provide numerous embodiments and are
non-limiting: [0793] Clause 1. A composition comprising RNA
encoding an IL-12sc protein, RNA encoding an IL-15 sushi protein,
RNA encoding an IFN.alpha. protein, and RNA encoding a GM-CSF
protein. [0794] Clause 2. The composition of clause 1, wherein the
IFN.alpha. protein is an IFN.alpha.2b protein. [0795] Clause 3. The
composition of clause 1, wherein (i) the RNA encoding an IL-12sc
protein comprises the nucleotide sequence of SEQ ID NO: 17 or 18,
or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO:
17 or 18 and/or (ii) the IL-12sc protein comprises the amino acid
sequence of SEQ ID NO: 14, or an amino acid sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
amino acid sequence of SEQ ID NO: 14. [0796] Clause 4. The
composition of clause 1, wherein (i) the RNA encoding an IL-15
sushi protein comprises the nucleotide sequence of SEQ ID NO: 26,
or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO:
26 and/or (ii) the IL-15 sushi protein comprises the amino acid
sequence of SEQ ID NO: 24, or an amino acid sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
amino acid sequence of SEQ ID NO: 24. [0797] Clause 5. The
composition of clause 1, wherein (i) the RNA encoding an IFN.alpha.
protein comprises the nucleotide sequence of SEQ ID NO: 22 or 23,
or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%,
90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO:
22 or 23 and/or (ii) the IFN.alpha. protein comprises the amino
acid sequence of SEQ ID NO: 19, or an amino acid sequence having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the
amino acid sequence of SEQ ID NO: 19. [0798] Clause 6. The
composition of clause 1, wherein (i) the RNA encoding a GM-CSF
protein comprises the nucleotide sequence of SEQ ID NO: 29, or a
nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%,
85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 29
and/or (ii) the GM-CSF protein comprises the amino acid sequence of
SEQ ID NO: 27, or an amino acid sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence
of SEQ ID NO: 27. [0799] Clause 7. The composition of clause 1,
wherein at least one RNA comprises a modified nucleoside in place
of at least one uridine, wherein the modified nucleoside is
pseudouridine (.psi.), N1-methyl-pseudouridine (m1.psi.),
5-methyl-uridine (m5U), or a combination thereof. [0800] Clause 8.
The composition of clause 1, wherein each RNA comprises a modified
nucleoside in place of at least one uridine, wherein the modified
nucleoside is pseudouridine (.psi.), N1-methyl-pseudouridine
(m1.psi.), 5-methyl-uridine (m5U), or a combination thereof [0801]
Clause 9. The composition of clause 1, wherein at least one RNA
comprises the 5' cap) m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG,
or 3'-O-Me-m.sup.7G(5')ppp(5')G, or
m.sub.2.sup.7,3'-OGppp(m1.sup.2'-O)ApG, or
3'-O-Me-m.sup.7G(5')ppp(5')G. [0802] Clause 10. The composition of
clause 1, wherein at least one RNA comprises a 5' UTR comprising
(i) a nucleotide sequence selected from the group consisting of SEQ
ID NOs: 2, 4, and 6, or (ii) a nucleotide sequence having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to a nucleotide
sequence selected from the group consisting of SEQ ID NOs: 2, 4,
and 6 and/or a 3' UTR comprising (i) the nucleotide sequence of SEQ
ID NO: 8, or (ii) a nucleotide sequence having at least 99%, 98%,
97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence
of SEQ ID NO: 8. [0803] Clause 11. The composition of clause 1,
wherein at least one RNA comprises a poly-A tail of at least 100
nucleotides. [0804] Clause 12. The composition of clause 11,
wherein the poly-A tail comprises the poly-A tail shown in SEQ ID
NO: 78. [0805] Clause 13. The composition of clause 1, wherein one
or more RNA comprises: [0806] a 5' cap comprising
m.sub.2.sup.7,3'-OGppp(m.sub.1.sup.2'-O)ApG or
3'-O-Me-m.sup.7G(5')ppp(5')G; [0807] a 5' UTR comprising (i) a
nucleotide sequence selected from the group consisting of SEQ ID
NOs: 2, 4, and 6, or (ii) a nucleotide sequence having at least
99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to a nucleotide
sequence selected from the group consisting of SEQ ID NOs: 2, 4,
and 6; [0808] a 3' UTR comprising (i) the nucleotide sequence of
SEQ ID NO: 8, or (ii) a nucleotide sequence having at least 99%,
98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide
sequence of SEQ ID NO:8; and [0809] a poly-A tail comprising at
least 100 nucleotides. [0810] Clause 14. The composition of clause
13, wherein the poly-A tail comprises SEQ ID NO: 78. [0811] Clause
15. A pharmaceutical composition comprising the composition of
clause 1 and a pharmaceutically acceptable carrier, diluent and/or
excipient. [0812] Clause 16. A method for treating or reducing the
likelihood of a solid tumor comprising administering to a subject
in need thereof the composition of clause 1. [0813] Clause 17. A
method for treating or reducing the likelihood of a solid tumor
comprising administering to a subject in need thereof a first RNA,
wherein the first RNA encodes an IL-12sc protein, an IL-15 sushi
protein, an IFN.alpha. protein, or a GM-CSF protein, and additional
RNA, wherein: [0814] if the first RNA encodes an IL-12sc protein,
then the additional RNA encodes an IL-15 sushi protein, an
IFN.alpha. protein, and a GM-CSF protein; [0815] if the first RNA
encodes an IL-15 sushi protein, then the additional RNA encodes an
IL-12sc protein, an IFN.alpha. protein, and a GM-CSF protein;
[0816] if the first RNA encodes an IFN.alpha. protein, then the
additional RNA encodes an IL-15 sushi protein, an IL-12sc protein,
and a GM-CSF protein; and [0817] if the first RNA encodes a GM-CSF
protein, then the additional RNA encodes an IL-15 sushi protein, an
IFN.alpha. protein, and an IL-12sc protein. [0818] Clause 18. The
method of clause 17, wherein the first RNA is administered to the
subject at the same time as the additional RNA. [0819] Clause 19.
The method of clause 17, wherein the RNA is administered
intra-tumorally or peri-tumorally. [0820] Clause 20. The method of
clause 17, wherein the subject is further treated with an
additional therapy comprising (i) surgery to excise, resect, or
debulk a tumor, (ii) immunotherapy, (iii) radiotherapy, or (iv)
chemotherapy. [0821] Clause 21. The method of clause 17, wherein
the subject is further treated with a checkpoint modulator. [0822]
Clause 22. The method of clause 21, wherein the checkpoint
modulator is an anti-PD1 antibody, an anti-CTLA-4 antibody, or a
combination of an anti-PD1 antibody and an anti-CTLA-4 antibody.
[0823] Clause 23. The method of clause 21, wherein the RNA is
administered intra-tumorally or peri-tumorally via injection, and
the checkpoint modulator is administered systemically. [0824]
Clause 24. The method of clause 17, wherein the solid tumor is a
sarcoma, carcinoma, or lymphoma. [0825] Clause 25. The method of
clause 17, wherein the solid tumor is in the lung, colon, ovary,
cervix, uterus, peritoneum, testicles, penis, tongue, lymph node,
pancreas, bone, breast, prostate, soft tissue, connective tissue,
kidney, liver, brain, thyroid, or skin. [0826] Clause 26. The
method of clause 17, wherein the solid tumor is an epithelial
tumor, Hodgkin lymphoma (HL), non-Hodgkin lymphoma, prostate tumor,
ovarian tumor, renal cell tumor, gastrointestinal tract tumor,
hepatic tumor, colorectal tumor, tumor with vasculature,
mesothelioma tumor, pancreatic tumor, breast tumor, sarcoma tumor,
lung tumor, colon tumor, brain tumor, melanoma tumor, small cell
lung tumor, neuroblastoma tumor, testicular tumor, carcinoma tumor,
adenocarcinoma tumor, glioma tumor, seminoma tumor, retinoblastoma,
or osteosarcoma tumor. [0827] Clause 27. The method of clause 17,
wherein treating or reducing the likelihood of the solid tumor
comprises reducing the size of a tumor, reducing the likelihood of
a reoccurrence of cancer in remission, or reducing the likelihood
of cancer metastasis in the subject. [0828] Clause 28. A
combination therapy method for treating or reducing the likelihood
of a solid tumor, comprising administering to a subject in need
thereof RNAs and a further therapy, wherein the RNAs encode an
IL-12sc protein, an IL-15 sushi protein, an IFN.alpha. protein, and
a GM-CSF protein, and the further therapy comprises immunotherapy,
chemotherapy, or a checkpoint modulator. [0829] Clause 29. The
combination therapy method of clause 28, wherein the further
therapy comprises an anti-PD1 antibody, an anti-CTLA-4 antibody, or
a combination of an anti-PD1 antibody and an anti-CTLA-4 antibody.
[0830] Clause 30. An isolated nucleic acid comprising a sequence
encoding an IL-12sc protein, wherein: [0831] the sequence encoding
the IL-12sc protein comprises a) contiguous nucleotides having at
least 99%, 98%, 97%, 96%, 95%, 90%, 85%, 80%, or 78% identity to
nucleotides 1-984 of SEQ ID NO: 16 or 18, b) contiguous nucleotides
having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 81% identity
to nucleotides 1027-1623 of SEQ ID NO: 16 or 18, and c) nucleotides
encoding a linker between the nucleotides of a) and b). [0832]
Clause 31. The nucleic acid of clause 30, which is a DNA. [0833]
Clause 32. The nucleic acid of clause 30, which is an RNA. [0834]
Clause 33. An isolated nucleic acid comprising a sequence encoding
an IFN.alpha. protein, wherein: [0835] the sequence encoding the
IFN.alpha. protein has at least 99%, 98%, 97%, 96%, 95%, 90%, 85%,
or 80% identity to the nucleotide sequence of SEQ ID NO: 21 or 23.
[0836] Clause 34. The nucleic acid of clause 33, which is a DNA.
[0837] Clause 35. The nucleic acid of clause 33, which is an RNA.
[0838] Clause 36. A method for treating or reducing the likelihood
of a solid tumor comprising administering to a subject in need
thereof the RNA of clause 34, wherein: the subject is further
treated with additional RNA encoding an IL-15 sushi protein, an
IFN.alpha. protein, and a GM-CSF protein. [0839] Clause 37. A
method for treating or reducing the likelihood of a solid tumor
comprising administering to a subject in need thereof the RNA of
clause 35, wherein: the subject is further treated with additional
RNA encoding an IL-15 sushi protein, an IL-12sc protein, and a
GM-CSF protein. [0840] Clause 38. A method of producing an RNA
encoding IL-12sc, comprising contacting an expression construct
comprising the nucleic acid of clause 32 operably linked to a
promoter with an RNA polymerase under conditions permissive for
transcription. [0841] Clause 39. A method of producing an RNA
encoding IFN.alpha., comprising contacting an expression construct
comprising the nucleic acid of clause 35 operably linked to a
promoter with an RNA polymerase under conditions permissive for
transcription. [0842] Clause 40. A kit comprising the composition
of clause 1. [0843] Clause 41. A kit comprising RNA encoding an
IL-12sc protein, RNA encoding an IL-15 sushi protein, RNA encoding
an IFN.alpha. protein, and RNA encoding a GM-CSF protein, wherein
the RNAs are not in the same container. [0844] Clause 42. The kit
of clause 41, wherein each RNA is in a separate container. [0845]
Clause 43. The kit of any one of clause 40-42, further comprising
instructions for use of the composition or RNAs for treating or
reducing the likelihood of a solid tumor.
[0846] This description and exemplary embodiments should not be
taken as limiting. For the purposes of this specification and
appended claims, unless otherwise indicated, all numbers expressing
quantities, percentages, or proportions, and other numerical values
used in the specification and claims, are to be understood as being
modified in all instances by the term "about," to the extent they
are not already so modified. Accordingly, unless indicated to the
contrary, the numerical parameters set forth in the following
specification and attached claims are approximations that may vary
depending upon the desired properties sought to be obtained. At the
very least, and not as an attempt to limit the application of the
doctrine of equivalents to the scope of the claims, each numerical
parameter should at least be construed in light of the number of
reported significant digits and by applying ordinary rounding
techniques.
[0847] It is noted that, as used in this specification and the
appended claims, the singular forms "a," "an," and "the," and any
singular use of any word, include plural referents unless expressly
and unequivocally limited to one referent. As used herein, the term
"include" and its grammatical variants are intended to be
non-limiting, such that recitation of items in a list is not to the
exclusion of other like items that can be substituted or added to
the listed items.
EXAMPLES
[0848] The following examples are provided to illustrate certain
disclosed embodiments and are not to be construed as limiting the
scope of this disclosure in any way.
Example 1--Materials and Methods
[0849] B16F10 Tumor Model:
[0850] Female C57BL/6J mice (Jackson Laboratory; Bar Harbor, Me.),
6-8 weeks-old and weighing between 17.0 and 20.9 g were acclimated
for at least three days prior to study enrollment. Mice had free
access to food (Harlan 2916 rodent diet, Massachusetts, USA) and
sterile water and housed on 12 hours light/dark cycle at 22.degree.
C..+-.2.degree. C. with a relative humidity of 55%.+-.15%. B16F10
cells were obtained from the American Type Culture Collection
(ATCC) (Manassas, Va. USA) (Cat No. CRL-6475) and cultured in
Dulbecco's Modified Eagle's Medium (DMEM) (Life technologies, Cat
No. 11995) supplemented with 10% heat inactivated Fetal Bovine
Serum (HI FBS) (Life technologies, Cat No. 10082-147) in 5% CO2 at
37.degree. C. The cells were harvested using 0.25% Trypsin-EDTA
(Life technologies, Cat No. 25200-056), resuspended in Dulbecco's
phosphate-buffered saline (DPBS) (Life technologies, Cat No.
14190-144), and 0.5.times.10{circumflex over ( )}6 cells/200 .mu.l
per mouse subcutaneously (SC) implanted into the right flank of
female C57BL/6J mice. For dual flank tumor models on day 0,
0.5.times.10{circumflex over ( )}6 B16F10 cells/200 .mu.l per mouse
were subcutaneously (SC) implanted into the right flank and
0.25.times.10{circumflex over ( )}6 B16F10 cells/200 .mu.l per
mouse were SC implanted into the left flank. To test whether local
administration of cytokine mRNA can have distant effects (see FIG.
19), female C57BL/6JOlaHsd mice (Envigo, Rossdorf, Germany), 6-8
weeks of age, with a weight between 17 and 24 g, were acclimated
for at least six days prior to study enrollment. Mice had free
access to food (ssniff M-Z autoclavable Soest, Germany) and sterile
water and housed on 12 hours light/dark cycle at 22.degree.
C..+-.2.degree. C. with a relative humidity of 55%.+-.10%. B16F10
cells were obtained from the American Type Culture Collection
(ATCC.RTM. CRL-6475.TM.) and cultured in DMEM, high glucose,
GlutaMAX.TM. (Life technologies, Cat No. 31966047) supplemented
with 10% Fetal Bovine Serum (FBS) (Biochrom, Cat No. S 0115) in
7.5% CO2 at 37.degree. C. The cells were harvested using
StemPro.RTM. Accutase.RTM. Cell Dissociation Reagent (Life
technologies, Cat No. A1110501), re-suspended in Dulbecco's
phosphate-buffered saline (DPBS) (Life technologies, Cat No.
14190-169), and 0.3.times.10{circumflex over ( )}6 cells/100 .mu.l
per mouse subcutaneously (SC) were implanted into the right shaven
flank of female C57BL/6J mice. For seeding of distant lung tumors,
B16F10_luc-gfp cells were used. These cells were derived from
B16F10 by stable transfection with a plasmid coding for Luciferase
and GFP. B16F10_luc-gfp cells were cultured with the same
conditions as the B16F10; only 0.5 .mu.g/mL Puromycin was added to
the culture medium. One day after SC implantation
0.3.times.10{circumflex over ( )}6 cells/200 .mu.l of
B16F10_luc-gfp cells were injected per mouse intravenously (IV)
into the tail vein. Intratumoral mRNA injections were initiated
10-14 days after SC inoculation of the tumors. Tumor growth was
assessed by caliper measurements every 2-3 days and is expressed as
the product of the perpendicular diameters using the following
formula: a2*b/2, with a<b. Engraftment of luciferase-positive
tumor cells in the lung was analyzed by in vivo bioluminescence
imaging using the Xenogen IVIS Spectrum imaging system (Caliper
Life Sciences). An aqueous solution of L-luciferin (2500, 1.6 mg;
BD Biosciences) was injected intraperitoneally. Emitted photons
from live animals quantified 10 min later with an exposure time of
1 min. Regions of interest (ROI) were quantified as average
radiance (photons s.sup.-1 cm.sup.-2'sr.sup.-1, represented by as
color-scaled images superimposed on grayscale photos of mice using
the Living Image software from Caliper Life Sciences). For absolute
quantification, the bioluminescence signal was blotted as total
flux (photons s.sup.-1). For studies performed in FIGS. 20C-G and
21E-I the above described model of C57BL/6JOlaHsd mice (Envigo,
Rossdorf, Germany) without seeding of lung metastasis was used as
well.
[0851] CT26 Tumor Model:
[0852] For studies performed in FIGS. 2, 3, 7D-F, 8, 9, 12D and 21,
female Balb/c Rj mice (Janvier, Genest-St.-Isle, France), 6-8 weeks
of age, with a weight between 17 and 24 g, were acclimated for at
least six days prior to study enrollment. Mice had free access to
food (ssniff M-Z autoclavable Soest, Germany) and sterile water and
housed on 12 hours light/dark cycle at 22.degree. C..+-.2.degree.
C. with a relative humidity of 55%.+-.10%. CT26 cells were obtained
from the (ATCC.RTM. CRL-2638.TM.) and cultured in Roswell Park
Memorial Institute medium (RPMI) 1640 Medium, GlutaMAX.TM. (Life
technologies, Cat No. 61870-044) supplemented with 10% Fetal Bovine
Serum (FBS) (Biochrom, Cat No. S 0115) in 5% CO2 at 37.degree. C.
The cells were harvested using StemPro.RTM. Accutase.RTM. Cell
Dissociation Reagent (Life technologies, Cat No. A1110501),
resuspended in DPBS (Life technologies, Cat No. 14190-169), and
0.5.times.10{circumflex over ( )}6 cells/100 .mu.l per mouse SC
implanted into the right shaven flank of female Balb/c Rj mice.
Intratumoral RNA injections were initiated 13-19 days after
inoculation of the tumors. Tumor growth was assessed by caliper
measurements every 2-3 days and is expressed as the product of the
perpendicular diameters using the following formula: a2*b/2 where b
is the longer of the two diameters (a<b).
[0853] For studies performed in FIG. 6, and 7A-C female BALB/c mice
(Jackson Laboratory; Bar Harbor, Me.), 6-8 weeks-old and weighing
between 17.0 and 20.9 g were acclimated for at least three days
prior to study enrollment. Mice had free access to food (Harlan
2916 rodent diet, Massachusetts, USA) and sterile water and housed
on 12 hours light/dark cycle at a temperature (22.degree.
C..+-.2.degree. C.), relative humidity (55%.+-.15%). CT26 cells
were obtained from the ATCC (Manassas, Va. USA) (Cat No. CRL-2638)
and cultured in RPMI-1640 (Life technologies, Cat No. 11875-093)
supplemented with 10% HI FBS (Life technologies, Cat No. 10082-147)
in 5% CO2 at 37.degree. C. The cells were harvested using 0.25%
Trypsin-EDTA (Life technologies, Cat No. 25200-056), re-suspended
in DPBS (Life technologies, Cat No. 14190-144), and
0.5.times.10{circumflex over ( )}6 cells/200 .mu.l per mouse SC
implanted into the right flank of BALB/c female mice.
[0854] In CT26 tumor model in addition to tumor growth
gp70-reactive CD8+ T-cells were measured in blood where indicated.
Blood samples were taken using EDTA-coated tubes. 100 .mu.L of
blood was transferred to FACS tubes and antibody mixture was added
containing T-Select H-2Ld MuLV gp70 Tetramer-SPSYVYHQF-APC (MBL
(TS-M-521-2), 4 .mu.L for 100 .mu.L blood), anti-CD8a FITC (life
technologies (MCD801), 1 .mu.L for 100 blood)) and anti-CD45 V500
(BD (561487), 1 .mu.L for 100 .mu.L blood)). After 20 min
incubation at room temperature Blood Lysis Buffer (BD (349202), 300
.mu.L per tube) was added and incubated for further 6 min. Then
samples were washed twice with PBS-EDTA buffer. FACS samples were
analyzed on a FACS Canto II flow cytometer.
[0855] MC38 Tumor Model:
[0856] Female C57BL/6J mice (Jackson Laboratory; Bar Harbor, Me.),
6-8 weeks-old and weighing between 17.0 and 20.9 g were acclimated
for at least three days prior to study enrollment. Mice had free
access to food (Harlan 2916 rodent diet, Massachusetts, USA) and
sterile water and housed on 12 hours light/dark cycle at 22.degree.
C..+-.2.degree. C. with a relative humidity of 55%.+-.15%. MC38
cells were generous gifts from Dr S. A. Rosenberg (National
Institute of Health, Bethesda, Md., USA). The cell line was
cultured in RPMI-1640 with L-glutamine (Gibco, Cat No. 11875)
supplemented with 10% HI FBS (Gibco, Cat No. 100082) in 5% CO2 at
37.degree. C. The cells were harvested, re-suspended in DPBS
(Gibco, Cat No. 14190), and 1.times.10{circumflex over ( )}6
cells/200 .mu.l per mouse SC implanted into the right flank of
female C57BL/6J mice.
[0857] A375 Tumor Model:
[0858] Female severe combined immune deficiency (SCID) mice
(Jackson Laboratory; Bar Harbor, Me.), 6-8 weeks-old and weighing
between 17.0 and 20.9 g were acclimated for at least three days
prior to study enrollment. Mice had free access to food (Harlan
2916 rodent diet, Massachusetts, USA), sterile water and housed on
12 hours light/dark cycle at 22.degree. C..+-.2.degree. C. with a
relative humidity of 55%.+-.15%. A375 cells were obtained from the
ATCC (Manassas, Va. USA) (Cat No. CRL-1619). The cell line was
cultured in DMEM (Life technologies, Cat No. 11995) supplemented
with 10% HI FBS (Life technologies, Cat No. 10082-147) in 5% CO2 at
37.degree. C. The cells were harvested using 0.25% Trypsin-EDTA
(Life technologies, Cat No. 25200-056), re-suspended in DPBS (Life
technologies, Cat No. 14190-144), and 3.0.times.10.sup.6/100 .mu.l
PBS were mixed with 100 ul BD Matrigel Matrix (BD, Cat No. 354234)
and implanted SC into the right flank of female SCID mice.
[0859] KM12 (CRC) Xenograft Model: Female NOD.CB17-Prkdcscid/SCID
mice (Jackson Laboratory, Bar Harbor, Me.), 10-weeks-old and
weighing between 17.3 g and 21.9 g were acclimated for at least
three days prior to study enrollment. Mice had free access to food
(Harlan 2916 rodent diet, Massachusetts, USA), sterile water and
were housed on 12 hours light/dark cycle at (22.+-.2.degree. C.)
with a relative humidity (55.+-.15%). KM-12 cells were obtained
from the American National Cancer Institute (NCI) (Cat No. 507345).
The cells were grown in RPMI medium 1640 with L-glutamine (Gibco,
Cat No. 11875) supplemented with 10% HI FBS (Gibco, Cat No. 10082),
and incubated at 37.degree. C. with 5% CO2. The cells were
harvested using 0.25% Trypsin-EDTA (Gibco, Cat No. 25200),
re-suspended in DPBS (Gibco, Cat No. 14190), and for each mouse
5.0.times.106 cells in 200 .mu.l DPBS with 50% matrigel (BD, Cat
No. 356234) were SC implanted into the right flank of female SCID
mice.
[0860] RPMI8226 (Myeloma) Xenograft Model: Female NSG mice (Jackson
Laboratory, Bar Harbor, Me.), 12-weeks-old and weighing between
19.8 g and 26.6 g were acclimated for at least three days prior to
study enrollment. Mice had free access to food (Harlan 2916 rodent
diet, Massachusetts, USA), sterile water and were housed on 12
hours light/dark cycle at (22.+-.2.degree. C.) with a relative
humidity (55.+-.15%). RPMI8226 cells were obtained from the ATCC
(Cat No. CCL-155). The cells were grown in RPMI medium 1640 with
L-glutamine (Gibco, Cat No. 11875) supplemented with 10% HI FBS
(Gibco, Cat No. 10082), and incubated at 37.degree. C. with 5% CO2.
The cells were harvested using 0.25% Trypsin-EDTA (Gibco, Cat No.
25200), re-suspended in DPBS (Gibco, Cat No. 14190), and for each
mouse 5.0.times.106 cells in 200 .mu.l DPBS with 50% matrigel (BD,
Cat No. 356234) were SC implanted into the right flank of female
NSG mice.
[0861] NCI-N87 (Gastric) Xenograft Model: Female
NOD.CB17-Prkdcscid/SCID (Jackson Laboratory, Bar Harbor, Me.),
11-weeks-old and weighing between 18.3 and 22.7 g were acclimated
for at least three days before the study enrollment. Mice had free
access to food (Harlan 2916 rodent diet, Massachusetts, USA),
sterile water and were housed on 12 hours light/dark cycle at
(22.+-.2.degree. C.) with a relative humidity (55.+-.15%). NCI-N87
cells were obtained from the ATCC (Cat No. CRL-5822). The cells
were grown in RPMI medium 1640 with L-glutamine (Gibco, Cat No.
11875) supplemented with 10% HI FBS (Gibco, Cat No. 10082), and
incubated at 37.degree. C. with 5% CO2. The cells were harvested
using 0.25% Trypsin-EDTA (Gibco, Cat No. 25200), re-suspended in
DPBS (Gibco, Cat No. 14190), and for each mouse 3.0.times.106 cells
in 200 .mu.l DPBS with 50% matrigel (BD, Cat No. 356234) were SC
implanted into the right flank of female SCID mice.
[0862] NCI-H1975 (NSCLC) Xenograft Model: Female NSG mice (Jackson
Laboratory, Bar Harbor, Me.), 10-weeks-old and weighed between 18.8
g and 26.0 g were allowed to acclimate for at least three days
before study enrollment. Mice had free access to food (Harlan 2916
rodent diet, Massachusetts, USA), sterile water and were housed on
12 hours light/dark cycle at (22.+-.2.degree. C.) with a relative
humidity (55.+-.15%). NCI-H1975 cells were obtained from the ATCC
(Cat No. CRL-5908) and cultured in RPMI medium 1640 with
L-glutamine (Gibco, Cat No. 11875) supplemented with 10% HI FBS
(Gibco, Cat No. 10082), and incubated at 37.degree. C. with 5% CO2.
The cells were harvested using 0.25% Trypsin-EDTA (Gibco, Cat No.
25200), re-suspended in DPBS (Gibco, Cat No. 14190), and for each
mouse 5.0.times.106 cells in 200 .mu.l DPBS with 50% matrigel (BD,
Cat No. 356234) were SC implanted into the right flank of female
NSG mice.
[0863] Tumor Re-Challenge:
[0864] Female C57BL/6J mice were implanted with B16F10 cells as
described above. Mice were treated with 4 intratumoral injections
(80 .mu.g mRNA/20 .mu.g per target) on days 11, 13, 15, and 17 with
ModB cytokine mRNA mixture (IL-15sushi, IL-12sc, GM-CSF,
IFN.alpha.). After cytokine mRNA treatment 8 mice were tumor free.
Four weeks after the last cytokine mRNA treatment tumor free mice
were re-challenged with 0.5.times.10{circumflex over ( )}6 B16F10
cells/200 .mu.l per mouse by SC injection and tumor growth was
monitored.
[0865] Tumor Monitoring:
[0866] Tumors were measured with a caliper twice weekly until final
sacrifice. When a tumor size reached approximately 2000 mm.sup.3 or
there are animal health issues (20% area of a tumor ulcerated),
animals were euthanized. Tumor regression was defined as i) tumor
volume<20 mm3 at the end of the study or ii)
T.sup.F/T.sup.0<1, where the T.sup.F equals the final tumor
volume and T.sup.0 equals tumor volume on the day of the first
intratumoral mRNA injection.
[0867] mRNA Modification a (ModA):
[0868] Synthetic DNA fragments coding for the gene of interest were
cloned into a common starting vector, comprising a 5'-UTR
(corresponding in some cases to SEQ ID NO: 1), a 3' UTR consisting
of two elements called F and I (corresponding in some cases to SEQ
ID NO: 7), and a poly(A)-tail of 110 nucleotides in total
(A30-linker-A70 structure; corresponding in some cases to SEQ ID
NO: 78). Linearization of plasmid DNA was performed downstream of
the poly(dA:dT) with a classIIS restriction enzyme to generate a
template with no additional nucleotide beyond the poly(dA:dT) (see
Holtkamp et al., Blood 108(13):4009-172006 (2006)). Linearized
plasmid DNA was subjected to in vitro transcription with T7 RNA
polymerase (Thermo Fisher) as previously described (see
Grudzien-Nogalska E et al., Methods Mol Biol. 969:55-72 (2013)) in
the presence of 7.5 mM ATP, CTP, UTP, GTP and 6 mM D1, a
beta-S-antireverse cap analogue (beta-S-ARCA, Cap0) (see Kuhn A N
et al, Gene Ther. 17(8):961-71 (2010)). RNA was purified using
magnetic particles (see Berensmeier S. Appl Microbiol Biotechnol.
73(3):495-504 (2006)), and RNA concentration and quality were
assessed spectrophotometry and analyzed by capillary gel
electrophoresis systems, respectively.
[0869] mRNA Modification B (ModB):
[0870] Synthetic DNA fragments coding for the gene of interest were
cloned into a common starting vector, comprising a 5'-UTR
(corresponding in some cases to the Tobacco Etch Viral leader
sequences TEV, SEQ ID NO: 3), a 3' UTR consisting of two elements
called F and I (corresponding is some cases to SEQ ID NO: 7), and a
poly(A)-tail of 110 nucleotides in total (A30-Linker-A70
structure). Upon linearization of plasmid DNA as described above,
in vitro transcription with T7 RNA polymerase (Thermo Fisher) was
performed. This was carried out as described for ModA, but no cap
structure was added to the reaction and UTP was substituted for
N1-methyl-pseudouridinetriphosphate. RNA was then purified using
magnetic particles (Berensmeier 2006), and subsequently Cap1
structure was enzymatically introduced using a commercially
available system based on the Vaccinia virus capping enzyme (NEB)
and addition of mRNA Cap 2'-O-methyltransferase (NEB). Afterwards,
the RNA was subjected to a further purification procedure by
Cellulose-based chromatography to remove double-stranded RNA
impurities (see Day P R et al, Phytopathology 67:1393 (1977);
Morris T J et al., Phytopathology 69:854-858 (1979); and Castillo A
et al., Virol J. 8:38 (2011)). RNA concentration and quality were
assessed spectrophotometry and analyzed by capillary gel
electrophoresis systems, respectively. Presence of dsRNA was
assessed in a Northwestern dot-blot assay using dsRNA-specific J2
mAb (English & Scientific Consulting) as described in Kariko et
al. Nucleic Acids Res. 39(21):e142 (2011).
[0871] mRNA Codon Optimization:
[0872] The coding sequence of a protein may influence the
efficiency as well as the accuracy of protein translation (see
Bossi L et al., Nature. 286(5769):123-7 (1980) and Irwin et al., J
Biol Chem. 270(39):22801-6 (1995)).
[0873] Therefore, different codon variants of each target were
designed and tested. The design of the different codon variants for
each target utilized publicly available software from Life
Technologies GmbH GeneArt.RTM. (Regensburg, Germany) (see Raab D et
al., Syst Synth Biol. 4(3):215-25 (2010)) and Eurofins MWG Operon
(Ebersberg, Germany). In addition, codon optimization was performed
manually editing each codon separately. A GC-content comparable to
the wild type sequence was maintained during the optimization
process.
[0874] Evaluation and selection of constructs was determined by in
vitro expression performed using: (i) mRNA lipofection of
HEK293T/17 cells and (ii) mRNA electroporation K562 cells.
[0875] Forty thousand (40,000) HEK293T/17 cells (ATCC.RTM.
CRL-11268.TM.) were seeded in flat bottom 96-well plates (VWR
International, Cat No. 734-1794) in DMEM, high glucose,
GlutaMAX.TM. (Life technologies, Cat No. 31966047) containing 0.5%
FBS (Biochrom, Cat No. S 0115). Seeded cells in 96-well plates were
incubated at 37.degree. C., 7.5% CO2 for 16-18 hours. Adherent
HEK293T/17 cells were transfected with RNA using Lipofectamine
Messenger MAX Reagent (Invitrogen, Cat No. LMRNA) according to the
manufacturer's protocol by adding 1.2 .mu.l of the transfection
reagent to 20 .mu.l of OptiMEM (Thermo Fisher, Cat No. 31985070) in
an RNAse-free 1.5 ml Safe-Lock tube biopur (Eppendorf, Germany, Cat
No. 0030121589); in a second tube the indicated RNA was added to 20
.mu.l of OptiMEM. After 10 minutes of incubation the tube
containing the RNA was diluted into the tube containing the
Lipofectamine Messenger MAX and incubated an additional 5 minutes
prior to adding 10 .mu.l of the RNA-lipid-complex drop wise to one
well of the 96-well plate containing the HEK293T/17 cell layer in
100 .mu.l medium. The 10 .mu.l RNA-lipid-complex contained 5 ng, 25
ng and 100 ng of target RNA respectively. The plates were placed
into the incubator for 3 h before an additional 140 .mu.l of fresh
medium (DMEM+0.5% FBS) was added. The transfected cells were
incubated for 15-18 hours and the supernatants were collected and
analyzed for protein content by ELISA as described herein.
[0876] K562, a human cell line derived from chronic myeloid
leukemia (ATCC.RTM. CCL-243.TM.) was cultivated in RPMI 1640
Medium, GlutaMAX.TM. (Life technologies, Cat No. 61870-044)
supplemented with 5% FBS. K562 were electroporated in a 96-well
plate system as follows. Cells were washed once in X-VIVO15 medium
(Lonza, Cat No. BE02-060Q) and suspended to a final concentration
of two hundred fifty thousand (250,000) cells/150 .mu.l in
X-VIVO15. A 150 .mu.l of cell suspension was added per well of a
96-well plate containing 5 ng, 25 ng, or 100 ng of RNA. Cells and
RNA were mixed and electroporation was performed in a 96 well Gene
Pulser MX cell electroporation system from Biorad (250 V,
1.times.30 ms pulse). Immediately following electroporation, cells
were transferred into a new culture plate with fresh medium without
antibiotics and rested for 1 hour in the incubator at 37.degree. C.
The medium was exchanged for fresh RPMI 1640 GlutaMAX supplemented
with 0.5% FCS and incubated 15-18 hours. Supernatants were
harvested and analyzed for protein content by ELISA as described
herein.
[0877] Protein concentrations were determined by ELISAs specific
for the RNA encoded cytokine according to the manufacturer's
protocol. (i) Human IL-15 sushi/IL-15 sushi R alpha Complex DuoSet
ELISA (ii) Mouse IL-12sc Duo Set Development System (DY419-05)
(iii) Mouse GM-CSF DuoSet ELISA Development Systems (DY415), all
obtained from RnD systems, and mouse IFN.alpha. ELISA Kit (TCM)
(PBL assay science, 42120-2).
[0878] For each mRNA target, the protein expression was evaluated
for the wt-sequence and the different codon-optimized variants.
Both data sets from lipofection of HEK293T/17 and electroporation
of K562 each tested with the three different amounts of modified
RNA were considered for selection of the protein coding sequence. A
codon-optimized sequence was selected if an at least 1.5-fold
increase of protein expression compared to WT sequence was
measured. If this was not the case, the WT sequence was selected.
For all constructs Earl-restriction sequences were eliminated by
mutating the DNA recognition sequence (5'-CTCTTC-3'), while
preserving the WT amino acid.
[0879] Cell Lines:
[0880] HEK293 (ATCC CRL-1573) cell line and human melanoma cell
lines, A101D (ATCC CRL-7798), A375 (ATCC CRL-1619), A2058 (ATCC
CRL-11147), and Hs294T (ATCC HTB-140), were obtained from ATCC and
cultured in DMEM (ThermoFisher Scientific, Cat 11885-084)
supplemented with 10% FBS HI FBS Life Technologies, Cat. 10082) in
a humidified atmosphere of 5% CO2 at 37.degree. C.
[0881] mRNA Transfection:
[0882] Cells were transfected using Lipofectamine MessengerMAX
Reagent (Invitrogen, Cat # LMRNA001) according to the manufacturer
protocol. Briefly, for each well 0.3 .mu.l of the transfection
reagent was diluted with 5 .mu.l of the Opti-MEM media (Life
Technologies, Cat. 31985062) and incubated for 10 min at room
temperature; mRNA mixtures were diluted with Opti-MEM media (5
.mu.l per well) and mixed with diluted MessengerMax reagent,
incubated for 5 min at room temperature and aliquoted to the
96-well plate. Cells were diluted in complete growth media and
40,000 cells per well were added to the transfection mixtures.
Cells were incubated for 24 hours at 37.degree. C. in a CO2
incubator then media was collected and cytokine concentration was
determined by Meso Scale Discovery (MSD) assay.
[0883] Meso Scale Discovery Assay:
[0884] Cytokine concentration was determine using MSD assays:
Proinflammatory Panel 1 (human) MSD kit (catalog N05049A-1) for
IL12p70, Cytokine Panel 1 (human) MSD kit (catalog N05050A-1) for
GM-CSF and IL-15 sushi, and Human IFN-.alpha. 2a Ultra-sensitive
Kit (catalog N05050A-1) for IFN.alpha.. Data were analyzed using
MSD Discovery Workbench V. 4.0.12 software and GraphPad Prism
V.6.00 software.
[0885] PBMC Isolation and Treatment:
[0886] Peripheral Blood Mononuclear Cells (PBMCs) were isolated by
density gradient media (Ficoll-Paque) from a leukopak (Research
Blood Components). 600,000 PBMCs were added per well of a 96-well
plate. Cells were treated with a cytokine mixture for 24 hrs and
IFN.gamma. production was measured in the cell culture media using
Human IFN.gamma. 384-Tissue Culture MSD Assay.
[0887] Measuring CD8 Response:
[0888] B16F10 tumor bearing mice received a single intratumoral
injection of Immuno mRNA (IFN.alpha., IL-15 sushi, GM-CSF, and
IL-12sc, ModB) or control luciferase mRNA (Placebo). Seven days
after intratumoral mRNA injection tumors were excised, processed
for immunofluorescence and stained with an antibody for CD8 (gray).
As shown in FIG. 25, CD8 cells were present after cytokine mRNA
intratumoral injection.
[0889] Preparation of mRNA for In Vivo Studies:
[0890] The respective mRNA mixtures were prepared for in vivo
studies by mixing equal quantities (micrograms) of mRNA in water at
2.times. the intended dose. The mRNA mixture was frozen at -80 C
until the day of intratumoral injection. On the day of injection,
mRNA was thawed and mixed with an equal volume of 2.times. sterile
Ringer's solution. The resulting 1.times.mRNA/Ringer solution was
used for intratumoral injection.
[0891] Gene Expression Analysis:
[0892] A375 tumors were homogenized in the RLT Buffer (Qiagen)
using Precellys 24 homogenizer (Bertin Instruments). Total RNA was
isolated with the RNeasy-96 Kit (Qiagen), following the spin
protocol with the DNase treatment. RNA was eluted with
nuclease-free water and quantified by ultraviolet absorbance using
a NanoDrop 8000 (Thermo Scientific). cDNA synthesis was performed
with the High Capacity RNA to cDNA Kit (Applied Biosystems)
according to the manufacturer's recommendations. Real-time PCR were
performed on a ViiA.TM.7 (Applied Biosystems) according to standard
protocol. Amplification was performed using the TaqMan Gene
Expression Master Mix (Applied Biosystems) and predesigned Taqman
Assays (Applied Biosystems). Gene expression was normalized to the
endogenous control GAPDH. Comparative ddCT method was used to
evaluate gene expression.
TABLE-US-00009 TABLE 3 Gene Assay ID Lot Number Fluorescent dye
ISG15 Hs01921425_s1 1548867 FAM ISG54 Hs01922738_s1 1532771 FAM Mx1
Hs00895608 m1 1539223 FAM hGAPDH 4326317E 1311049 VIC
Example 2--Combinations of Three mRNAs Reduce Tumor Volume In
Vivo
[0893] A mixture of modified mRNAs encoding GM-CSF, IL-2, and
IL-12sc was injected into B16F10 tumor bearing mice and tumor
growth was monitored to day 41. As shown in FIG. 1, intratumoral
injection of a combination of three mRNAs encoding GM-CSF, IL-2,
and IL-12sc having ModA (SEQ ID NOs: 32, 38, and 56; FIG. 1A), or a
combination of three mRNAs encoding GM-CSF, IL-2, and IL-12sc
having ModB (SEQ ID NOs: 35, 41, and 59; FIG. 1B) induced
regression in 6 out of the 10 mice, while mice treated with a
control mRNA encoding luciferase (ModA) displayed tumor regression
in 1 of 10 animals (FIG. 1C). These data were confirmed in a repeat
study of similar design (FIG. 1D-1G). In the repeat experiment, a
mixture of cytokine mRNA (GM-CSF, IL-2, IL-12sc) with ModA or ModB
lead to tumor regression in 5 of 9 mice, while treatment with
control mRNA in ModA and ModB displayed 2 of 9 and 0 of 9 tumor
regressions, respectively.
[0894] The effects of cytokine mRNA treatment were evaluated in
CT26 tumors. Mice with established CT26 tumors were injected with a
cytokine mRNA mixture encoding GM-CSF, IL-2, and IL-12sc in ModA
and ModB formats, respectively. Two control groups were included:
i) mRNA Ringer's diluent and ii) ModA mRNA encoding firefly
luciferase. A total of 6 intratumoral injections were administered
on days 19, 21, 24, 26, 28 and 31. As shown in FIG. 2, both GM-CSF,
IL-2, and IL-12sc mRNA ModA (SEQ ID NOs: 56, 32, and 38; FIG. 2A)
and ModB (SEQ ID NOs: 59, 35, and 41; FIG. 2B) resulted in tumor
regression in 5 and 6 out of 8 mice, respectively, while no tumors
treated with control mRNA in ModA (FIG. 2C) or Ringer's solution
(FIG. 2D) displayed tumor regression.
[0895] The cytokine mRNA mixture encoding IL-15 sushi, GM-CSF and
IL-12sc (ModB; SEQ ID NOs: 53, 59, and 41) and IL-2, GM-CSF and
IL-12sc (ModB; SEQ ID NOs: 35, 59, and 41) were evaluated for
anti-tumor activity in the CT26 tumor model. Tumors received
intratumoral mRNA injections on days 13, 15, 18, 20 and 22 after
tumor inoculation. As shown in FIG. 3, intratumoral injection of
either the IL-2 mixture (FIG. 3A) or IL-15 sushi mixture (FIG. 3B)
resulted in tumor regression in 5 out of 10 or 11 tumor-bearing
animals, respectively (FIGS. 3A and B), whereas in the control
group injected with luciferase mRNA (ModB) no tumor regression was
observed (FIG. 3C).
[0896] Anti-tumor activity of the mRNA mixture of IL-2, IL-12sc,
and GM-CSF (FIG. 4A-ModA [SEQ ID NOs: 32, 38, and 56], 4B-ModB [SEQ
ID NOs: 35, 41, and 59]), or IL-15 sushi, IL-12sc, and GM-CSF or
(FIG. 4C-ModA [SEQ ID NOs: 50, 38, and 56], 4D-ModB [SEQ ID NOs:
53, 41, and 59) was further evaluated in the B16F10 tumor model.
Mice with B16F10 tumors were injected intratumorally with mRNA on
days 11, 13, 15, and 17. Treatment of B16F10 tumors with the
cytokine mRNA mixture that encoded IL-15 sushi, IL-12sc, GM-CSF
resulted in tumor regression in 3 and 4 of 8 mice in ModA and ModB,
respectively. Tumors treated with an mRNA mixture of IL-2, IL-12sc,
and GM-CSF (ModA or ModB) had tumor regression in 4 out of 8 mice,
while no tumor regression was noted for mice treated with ModA or
ModB mRNA encoding luciferase (FIG. 4E-ModA, FIG. 4F-ModB).
Example 3--Combinations of Four mRNAs Reduce Tumor Volume In
Vivo
[0897] We next tested the effect of adding a fourth mRNA to the
cytokine mRNA mixture. B16F10 tumor bearing mice received four
intratumoral injections of ModB cytokine mRNA mixture encoding: i)
GM-CSF, IL-2, IL-12sc (SEQ ID NOs: 59, 35, and 41; FIG. 5A), ii)
GM-CSF, IL-15 sushi, IL-12sc (SEQ ID NOs: 59, 53, and 41; FIG. 5B)
and iii) GM-CSF, IL-15 sushi, IL-12sc, IFN.alpha. (SEQ ID NOs: 59,
53, 41, and 47; FIG. 5C), and tumor growth was monitored to day 45.
Each of the cytokine mRNA mixtures had an anti-tumor effect with 4
out of 8 tumors regressing following intratumoral injection of
cytokine mRNA mixtures of GM-CSF, IL-2, and IL-12sc or GM-CSF,
IL-15 sushi, and IL-12sc, and 7 out of 8 tumors regressed upon
treatment with GM-CSF, IL-15 sushi, IL-12sc, and IFN.alpha.. Mice
treated with control mRNA (ModB) exhibited no tumor regression
(FIG. 5D).
[0898] The anti-tumor activity of GM-CSF, IL-2, IL-12sc, and
IFN.alpha. was examined in three different murine in vivo tumor
models, CT26, B16F10 and MC38. Tumor bearing mice received 4-6
intratumoral injections of ModB cytokine mRNA encoding IL-2,
IL-12sc, GM-CSF and IFN.alpha. (SEQ ID NOs: 35, 41, 59, and 47) or
a control ModB mRNA encoding firefly luciferase. Anti-tumor
activity was assessed in each tumor model. Mice treated with this
combination of cytokine mRNA had 4/8, 7/8 and 5/5 regressing tumors
in the CT26 (FIG. 6A), B16F10 (FIG. 6C) and MC38 (FIG. 6E) models,
respectively. No tumor regression was observed in the comparator
tumor bearing mice treated with luciferase mRNA (FIGS. 6B [CT26],
6D [B16F10], and 6F [MC38]).
[0899] The anti-tumor activity of a four-component cytokine mRNA
mixture encoding each of IL-2, IL-12sc, GM-CSF and IFN.alpha.
(ModB, SEQ ID NOs: 35, 41, 59, and 47) or IL-15 sushi, IL-12sc,
GM-CSF and IFN.alpha. (ModB, SEQ ID NOs: 53, 41, 59, and 47) was
evaluated in the CT26 tumor model. Tumor bearing mice were treated
with 6 intratumoral injections and tumor growth was monitored.
Treatment with both IL-2, IL-12sc, GM-CSF and IFN.alpha. (FIG. 7A)
and IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (FIG. 7B)
effectively induced tumor regression in 4/8 and 8/8 mice,
respectively, while no tumor regressions were observed for mice
treated with the control mRNA (FIG. 7C). These data were confirmed
in a repeat study of similar design (FIG. 7D-F).
[0900] A study in CT26 tumor model was conducted in which
individual components were systematically removed from the mRNA
mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB, SEQ
ID NOs: 53, 41, 59, and 47). CT26 tumors were injected with
cytokine mRNA on days 12, 15, 19 and 22 after inoculation. Tumors
treated with four injections of mRNA encoding IL-15 sushi, IL-12sc,
GM-CSF and IFN.alpha. induced regression in all 10 treated tumors
(FIG. 8A). Tumors treated with the ModB mRNA mixtures of i) IL-15
sushi, IL-12sc and IFN.alpha., ii) IL-15 sushi, GM-CSF and
IFN.alpha., iii) IL-12sc, GM-CSF and IFN.alpha., iv) IL-15 sushi,
IL-12sc, and GM-CSF resulted in regression of 8, 6, 8, 7 out of 10
tumors, respectively (FIG. 8B-E). No tumors treated with control
mRNA (ModB) displayed tumor regression (FIG. 8F). To analyze tumor
growth kinetics, mean tumor volumes were calculated for each
treatment group up to day 33 (FIG. 8G). The smallest mean tumor
volume was observed for mice treated with the mixture of IL-15
sushi, IL-12sc, GM-CSF and IFN.alpha., while the largest mean tumor
volume was observed in the luciferase treated animals. Tumor growth
repression T/C (Tumor/Control based on mean tumor volume) was
plotted to day 19 (FIG. 8H) for each of the treatment groups. The
four-component mixture of IL-15 sushi, IL-12sc, GM-CSF and
IFN.alpha. exhibited the largest T/C.
[0901] Analogous to the study shown in FIG. 8, a study was
conducted in which individual components were systematically
removed from the mRNA mixture of IL-2, IL-12sc, GM-CSF and
IFN.alpha. (ModB; SEQ ID NOs: 35, 41, 59, and 47). CT26 tumors
received 6 intratumoral mRNA injections on days 19, 21, 23, 26, 28
and 30. Treatment with the cytokine mRNA mixture of IL-2, IL-12sc,
GM-CSF and IFN.alpha. resulted in tumor regression in 4 of 10
animals led to complete tumor regression in 4 animals and stable
disease beyond day 40 in two individuals (FIG. 9A). Tumors treated
with the ModB 3-component mRNA mixtures of i) IL-2, IL-12sc, and
IFN.alpha., ii) IL-2, GM-CSF and IFN.alpha., iii) IL-12sc, GM-CSF
and IFN.alpha., and iv) IL-12sc, GM-CSF and IL-2 resulted in
regression of 2, 3, 3 and 4 tumors, respectively (FIG. 9B-E) and
CT26 tumors treated with a control luciferase mRNA displayed no
tumor regression (FIG. 9F).
[0902] To analyze tumor growth kinetics, mean tumor volumes were
calculated for each treatment group up to day 36. The smallest mean
tumor volume was observed for mice treated with the mixture of
IL-2, IL-12sc, GM-CSF and IFN.alpha., while the largest mean tumor
volume was observed in the luciferase treated animals (FIG. 10 A).
Tumor growth repression T/C (Tumor/Control based on mean tumor
volume) was plotted to day 30 (FIG. 10B) for each of the treatment
groups. The four-component mixture of IL-2, IL-12sc, GM-CSF and
IFN.alpha. exhibited the largest T/C.
[0903] The anti-tumor response from the different cytokine mRNA
mixtures in FIG. 9 were further analyzed as follows: The tumor
volume change (.DELTA.V) as defined by the difference in tumor
volume between the measurement at the end of experiment or
termination (V.sub.t) and the measurement at the beginning of the
experiment (V.sub.b) (.DELTA.V=V.sub.t-V.sub.b), was calculated for
all mice in each of the six treatment groups, including mice
treated with 4 component cytokine mRNA mixture (IL-2, IL-12sc,
GM-CSF and IFN.alpha.), mice treated with 3 component mixture
missing one of the four cytokines and mice treated with control
luciferase mRNA. Mean (.mu.) and standard deviation (.sigma.) of a
trimmed data (removing top and bottom 10% of the original data) on
tumor volume change was calculated for control luciferase group and
the Shapiro-Wilk normality test of this trimmed data showed it
approximately followed a normal distribution. A Z score
(Z=(.DELTA.V-.mu.)/.sigma.) was then calculated for tumor volume
change data in each individual mouse from all treatment groups. A
ratio (R) between each tumor volume change value and the trimmed
mean of control group was calculated (R=.DELTA.V/.mu.). Given the
definitions, we consider the Z score as "significance of tumor
volume reduction" and R as "extent of tumor volume reduction". To
identify a mouse that shows a significantly smaller tumor volume
increase than that in control luciferase group (in other words
"significant tumor reduction" as compared with control group), a
cutoff of Z<=-1.645 (p(Z<=-1.645)=0.05) and R<=0.15 was
applied. The results showed that the number of mice in each
treatment group that has significantly smaller tumor volume
increase than control group as follows: i) 6 out of 8 mice for the
cytokine mRNA mixture of IL-2, IL-12sc, GM-CSF and IFN.alpha.
(ModB). ii) 2 of 8 mice for IL-2, GM-CSF and IFN.alpha. (ModB),
iii) 3 of 8 for IL-12sc, GM-CSF and IFN.alpha. and IL-2, IL-12sc,
and IFN.alpha. and iv) 4 of 8 mice treated with the cytokine mRNA
mixture of IL-2, IL-12sc, and GM-CSF (ModB) (FIG. 11).
[0904] Female C57BL/6J mice were implanted with B16F10 cells as
described above. Mice were treated with 4 intratumoral injection (8
.mu.g mRNA/2 .mu.g per target) on days 11, 15, 19, and 23 with ModB
cytokine mRNA mixture (IL-15 sushi, IL-12sc, GM-CSF, IFN.alpha.) or
control luciferase mRNA. Treatment with the 4-component mixture of
cytokine mRNA resulted in tumor rejection in 6/10 treated mice.
See, FIG. 24B. In comparison, no tumor free mice were observed in
any of the groups treated with a single mRNA (FIGS. 24C-F). The
combination of IL-15 sushi, IL-12sc, GM-CSF, IFN.alpha. led to
increased overall survival with 60% of the mice tumor free at Day
70, while all tumors of mice treated with a single cytokine mRNA
progressing to the stage where the animals needed to be euthanized
(FIG. 24G). Luciferase control is shown in FIG. 24A.
Example 4--Cytokine mRNA Protects Against Tumor Re-Challenge
[0905] To evaluate the effect of the cytokine mRNA mixture on the
development of immunological memory, re-challenge experiments were
performed. Briefly, B16F10 tumor bearing mice were treated with a
cytokine mRNA mixture of IL-15sushi, IL-12sc, GM-CSF, and
IFN.alpha. (Mod B; SEQ ID NOs: 53, 41, 59, and 47). A portion of
the cytokine mRNA treatment B16F10 tumors completely regressed
leading to tumor free animals. These tumor free animals were then
re-challenged with B16F10 cells as a way to assess adaptive immune
memory and 9 naive mice were implanted with B16F10 tumor cells as a
positive control for tumor engraftment (FIG. 12A). All 9 naive mice
engrafted with B16F10 cells developed tumors, whereas all eight
tumor-free mice rejected the B16F10 cells and did not exhibit
growth of B16F10 tumors (FIG. 12B). A portion of mice previously
treated with cytokine mRNA develop localized vitiligo at the
original site of the tumor (FIG. 12C). This experiment was
essentially repeated and results are shown in FIG. 33.
[0906] To evaluate the effect of the cytokine mRNA mixture on the
development of immunological memory, a re-challenge experiment was
performed using the CT26 tumor model. Therefore, CT26 tumor bearing
mice were treated with a cytokine mRNA mixture of IL-15sushi,
IL-12sc, GM-CSF, and IFN.alpha. (Mod B; SEQ ID NOs: 53, 41, 59, and
47). A portion of the cytokine mRNA treatment CT26 tumors
completely regressed leading to tumor free animals. Three tumor
free animals were then re-challenged with CT26 tumor cells and
three tumor free animals were then re-challenged with CT26 tumor
cells, in which the gp70 epitope (CT26-.DELTA.gp70) was knocked
out. 9 and 10, respectively, naive mice were implanted with CT26
tumor cells and CT26-.DELTA.gp70 as a positive control for tumor
engraftment. On day 21 after tumor inoculation 8 out of 9 naive
mice had engrafted with CT26 tumor cells developed tumors and all
10 naive mice engrafted with CT26-.DELTA.gp70 tumor cells developed
tumors whereas all three tumor-free mice in each group rejected the
CT26 and CT26-.DELTA.gp70 cells and did not exhibit growth of CT26
tumors and CT26-.DELTA.gp70, respectively (FIG. 12D). This
experiment shows that immunological memory upon cytokine mRNA
injection in the CT26 tumor model is not restricted to T-cells
specific for the immunodominant epitope gp70.
Example 5--Systemic Anti-Tumor Activity of Cytokine mRNA
[0907] To evaluate the ability of local intratumoral cytokine mRNA
to exert a systemic anti-tumor response, mice were engrafted with
B16F10 tumor cells on both the left and right flanks (FIG. 13A).
Mice bearing bilateral B16F10 tumors received four intratumoral
injections with control mRNA encoding luciferase or a cytokine mRNA
mixture encoding IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB;
SEQ ID NOs: 53, 41, 59, and 47). The right tumor was injected with
mRNA at three different dose levels (80 .mu.g, 8 .mu.g, and 0.8
.mu.g mRNA corresponding to 20 .mu.g, 2 .mu.g and 0.2 .mu.g
mRNA/target), while tumors on the left flank were untreated. Dose
dependent anti-tumor activity was observed in both the injected
(FIG. 13B) and uninjected (FIG. 13C) tumors with tumor growth
inhibition ranging from 88% in the uninjected tumor to 96% in the
injected tumor. Groups treated with cytokine mRNA treatment had
increased median survival compared to groups treated with the
Luciferase control mRNA (FIG. 13D).
[0908] To further evaluate the ability of local intratumoral
cytokine mRNA to exert a systemic anti-tumor response, mice were
engrafted with B16F10 tumor cells on the right flank and received
an IV injection of Luciferase-expressing B16F10 cells for induction
of tumors in the lung (FIG. 19A). On day 11, 14 and 18 after SC
tumor implantation mice bearing B16F10 tumors received in total
three intratumoral injections with cytokine mRNA mixture of IL-15
sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB; SEQ ID NOs: 53, 41,
59, and 47) into the flank tumor only, while tumors in the lung
were untreated. The control group received intratumoral injection
of equal amounts of control mRNA without any coding sequence. Mice
were sacrificed for endpoint analysis on day 20, at which time
lungs were taken out and weighed. FIG. 19B shows exemplarily
bioluminescence measurements of four animals and pictures of the
according lungs taken out in order to visualize the dark tumor
nodes. Tumor growth of SC tumors was strongly suppressed by
injection of cytokine mRNA mixture, whereas tumors injected with
control mRNA grew progressively as depicted in FIG. 19C showing
mean tumor volume of 15 mice in each group. Lung tumor growth was
suppressed in animals which received intratumoral cytokine mRNA
injection in SC tumors when compared to animals treated with
control mRNA; FIG. 19D shows total flux analysis of bioluminescence
measurements of all 15 animals per group on day 20, which is a
correlate for tumor burden due to Luciferase-expressing tumor
cells; line indicates median and asterisk indicates p<0.05
analyzed by T-test. Additionally, lungs of animals treated with
cytokine mRNA had significantly less weight (FIG. 19E, line
indicates median). Higher weight of lungs of animals treated with
control RNA resulted from higher tumor burden.
Example 6--Human Cytokine mRNA
[0909] To evaluate in vitro expression of the human cytokine mRNA,
an mRNA mixture encoding the human cytokines IL-15 sushi, IL-12sc,
GM-CSF, and IFN.alpha.2b (SEQ ID Nos: 26, 18, 29, and 23) (ModB)
were transfected into the HEK293 cell line along with four melanoma
tumor cell lines (A375, A101D, A2058 and Hs294T) (FIG. 14A). The
cytokine mRNA mixture exhibited dose dependent expression and
secretion across a panel of five human cell lines (FIG. 14B-F).
[0910] The pharmacodynamic effects of the human mRNA mixture of
IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.2b were evaluated in
vitro with human peripheral blood mononuclear cells (PBMC). In
short, human cytokine mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF
and IFN.alpha.2b (ModB) or the individual cytokine mRNAs encoding
IL-12sc, IFN.alpha.2b, IL-15 sushi or GM-CSF (ModB) were
transfected in HEK293 cells and the conditioned media was collected
at 24 hrs, diluted and added to human PBMC (FIG. 15A). The median
IFN.gamma. levels from 6 donors treated with the cytokine mRNA
mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.2b was 5623
pg/mL, while treatment with the individual cytokine mRNA for
IL-12sc, IFN.alpha.2b, IL-15 sushi or GM-CSF induced median
IFN.gamma. levels of 534, 67, 17, and 4 pg/mL, respectively (FIG.
15B).
[0911] In vivo expression of the human cytokine mRNA mixture of
IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha.2b (ModB) and IL-2,
IL-12sc, GM-CSF and IFN.alpha.2b (ModB) was monitored in the A375
human melanoma xenograft. Tumor bearing mice received a single
injection of cytokine mRNA and tumor samples were collected at 2
hrs, 4 hrs, 8 hrs, 24 hrs, 48 hrs and 72 hrs after mRNA injection.
Tumor lysates were prepared and expression of the individual human
cytokines IFN.alpha.2b (FIG. 16A), IL-2 (FIG. 16B), IL-12sc (FIG.
16C), IL-15 sushi (FIG. 16D), GM-CSF (FIG. 16E) were evaluated.
[0912] Time dependent expression was observed for each of the
individual cytokines with the maximal concentration (Cmax)
occurring between 2-8 hrs for the mixtures of IL-15 sushi, IL-12sc,
GM-CSF and IFN.alpha.2b (Table 4) and IL-2, IL-12sc, GM-CSF and
IFN.alpha.2b (Table 5).
TABLE-US-00010 TABLE 4 Pharmacokinetic results for the IL-15 sushi
mixture Tumor GM-CSF IFN.alpha.2b IL-12sc IL-15sushi t.sub.1/2
(hrs) 12.4 9.59 15.2 10.2 Tmax (hrs) 4 4 8 4 Cmax (pg/mg) 1591 4862
3767 2639
TABLE-US-00011 TABLE 5 Pharmacokinetic results for the IL-2 mixture
Tumor GM-CSF IFN.alpha.2b IL-12sc IL-2 t.sub.1/2 (hrs) 14.8 10.2
15.5 12.8 Tmax (hrs) 2 2 8 2 Cmax (pg/mg) 2487 10685 4961 4271
[0913] Induction of the human interferon alpha genes ISG15, ISG54
and MX1 were monitored in the A375 tumors as a pharmacodynamics
marker at 2 h, 4 h, 8 h, 24 h, 48 h and 72 h following mRNA
injection of the cytokine mRNA mixtures of IL-15 sushi, IL-12sc,
GM-CSF and IFN.alpha.2b (ModB) and IL-2, IL-12sc, GM-CSF and
IFN.alpha.2b (ModB). Compared to control treated tumors, A375
tumors treated with cytokine mRNA displayed greater than 100-fold
induction of ISG15 (FIG. 17A), ISG54 (FIG. 17B) and MX1 (FIG. 17C)
with peak induction occurring by 8 hrs after intratumoral mRNA
injection.
Example 7--Interferon Effect
[0914] B16F10-tumor-bearing mice received intratumoral injections
of ModA ("standard") cytokine mRNA encoding IL-2, Flt3 ligand
(FLT3L), 41BBL (also known as CD137L or tumor necrosis factor
superfamily member 9), and CD27L-CD40L (this comprises a fusion
protein of the soluble domain of CD27L also known as CD70, and
CD40L; both the CD27L and the CD40L is comprised of three soluble
domains of either CD27L or CD40L, all separated by GS-Linker
sequences (FIG. 18A, SEQ ID NOs: 32, 62, 68, and 74) or ModB
("modified") cytokine mRNA encoding IL-2, FLT3L, 41BBL, and
CD27L-CD40L (FIG. 18B, SEQ ID NOs: 35, 65, 71, and 77). In
addition, either ModA mRNA encoding IFN.alpha. (SEQ ID NO: 44) or
ModB mRNA encoding IFN.alpha. (SEQ ID No: 47) was added to the ModA
or ModB mRNA mixes, respectively (FIGS. 18D and 18E). Anti-tumor
activity was assessed.
[0915] Mice treated with this combination of ModA mRNA had 4/9 mice
tumor-free without IFN.alpha. (FIG. 18B) and 3/9 mice tumor-free
with IFN.alpha. (FIG. 18D). Therefore, treatment with IFN.alpha.
mRNA did not appear to increase the response to the cytokines when
mRNA was dosed in the ModA form.
[0916] In contrast, mice treated with the combination of ModB mRNA
had 1/9 mice tumor-free without IFN.alpha. (FIG. 18C) and 7/9 mice
tumor-free with IFN.alpha. (FIG. 18E). Thus, treatment with
IFN.alpha. mRNA increased the response to the mixture of cytokines
when mRNA was dosed in the ModB form.
Example 8--Cytokine mRNA in Combination with Antibodies
[0917] To evaluate the effect of intratumoral injection of cytokine
mRNA in combination with systemic administration of antibodies,
mice were engrafted with B16F10 or MC38 tumor cells on both the
left and right flanks. Mice received four intratumoral injections
with cytokine mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF and
IFN.alpha. (ModB; SEQ ID NOs: 53, 41, 59, and 47) into only one of
the flank tumors on Days 11, 15, 19, 23, while the other flank
tumor was left untreated. Mice also received intraperitoneal
injection anti-PD1 antibody (Sanofi murinized version of rat IgG2a
anti-mouse PD-1 clone RMP1-14 at 5 mg/kg) on Days 10, 13, 16, 19,
22, 25. Groups were as follows: 1) control mRNA (80 .mu.g total
mRNA; 50 .mu.L intratumoral injection at 1.6 mg/mL plus control
isotype antibody (clone MOPC-21 (BioLegend); 5 mg/kg): 2) control
mRNA plus anti-PD1 antibody; 3) cytokine mRNA plus control isotype
antibody; and 4) cytokine mRNA plus anti-PD1. Overall survival was
monitored in both the B16F10 (FIG. 20A) and MC38 (FIG. 20B) tumor
models. In both tumor models the highest overall survival was
observed with the combination of cytokine mRNA and anti-PD-1
treatment with 60% of mice bearing B16F10 and 80% of MC38 bearing
mice tumor free at the end of the study. In the B16F10 tumor model
10% of mice treated with anti-PD-1 or cytokine mRNA alone were
tumor free, while in the MC38 model 40% of mice treated with
anti-PD-1 and 30% of mice treated with cytokine alone were tumor
free. The results indicate strong antitumor activity associated
with cytokine mRNA and PD-1 combination.
[0918] To further evaluate the ability of local intratumoral
cytokine mRNA in combination with the PD-1 antibody to exert a
systemic anti-tumor response, mice were engrafted with B16F10 tumor
cells on the right flank and received one day later an IV injection
of Luciferase-expressing B16F10 cells for induction of lung
metastasis. On day 11, 14 and 17 after IV tumor implantation mice
bearing B16F10 tumors received in total three intratumoral
injections with cytokine mRNA mixture of IL-15 sushi, IL-12sc,
GM-CSF and IFN.alpha. (ModB; SEQ ID NOs: 53, 41, 59, and 47) into
the flank tumor only, while tumors in the lung were untreated. On
the same day mice also received intraperitoneal (IP) injections of
PD-1 antibody (Sanofi murinized version of rat IgG2a anti-mouse
PD-1 clone RMP1-14 at 10 mg/kg). Groups were as follows: 1) control
mRNA (40 .mu.g total mRNA; 50 .mu.L intratumoral injection of
control isotype antibody (clone MOPC-21 (BioLegend); 10 mg/kg)
(FIG. 20C); 2) control mRNA plus anti-PD1 antibody (FIG. 20D); 3)
cytokine mRNA plus control isotype antibody (FIG. 20E); and 4)
cytokine mRNA plus anti-PD1 (FIG. 20F). Tumor growth of SC tumors
was monitored (FIGS. 20C-F) as well as survival (FIG. 20G). Overall
survival in this model was determined by tumor burden due to SC
tumors as well as lung pseudometastasis tumor (not shown in this
Figure); in some mice the SC tumor was rejected, while lung
metastasis grew progressively. The highest overall survival was
observed with the combination of cytokine mRNA and anti-PD-1
treatment. 6-7% of mice treated with cytokine mRNA alone were tumor
free, while mice that had received anti-PD-1 alone or control
mRNA+isotype antibody were all sacrificed at day 22 due to high
tumor burden. The results indicate strong antitumor activity
associated with cytokine mRNA and PD-1 combination in this B16F10
tumor model with lung pseudo-metastasis, while anti-PD-1 antibody
alone did not show any anti-tumor activity.
[0919] To further evaluate the effect of intratumoral injection of
cytokine mRNA in combination with systemic administration of
antibodies, mice were engrafted with CT26 tumor cells on right
flanks. Mice received four intratumoral injections with cytokine
mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB;
SEQ ID NOs: 53, 41, 59, and 47) on day 11, 14, 18 and 21 after
tumor inoculation. On the same day mice also received
intraperitoneal (IP) injections of an anti-CTLA-4 antibody (100
.mu.g/200 .mu.L per mouse; clone 9H10 from InVivoMAb) or the
isotype control antibody (100 .mu.g/200 .mu.L per mouse; Armenian
hamster IgG from BioXCell). Groups were as follows: 1) cytokine
mRNA plus anti-CTLA-4 antibody (FIG. 21A); 2) cytokine mRNA plus
isotype control antibody (FIG. 21B); 3) control mRNA plus
anti-CTLA-4 antibody (FIG. 21C) and 4) control mRNA plus isotype
control antibody (FIG. 21D). Combination therapy of intratumoral
cytokine mRNA and IP-injected anti-CTLA-4 resulted in strongest
anti-tumoral activity with 12 tumor-free mice out of 16 mice on day
55 after tumor inoculation (FIG. 21A). Treatment with either
cytokine mRNA plus isotype control antibody (FIG. 21B) or control
mRNA plus anti-CTLA-4 antibody (FIG. 21C) induced less anti-tumoral
activity with 5 and 7 tumor-free mice at the end of the study,
respectively. In comparison, in the group that received control
mRNA plus isotype control antibody (FIG. 21D), only one tumor-free
mouse remained at the conclusion of the study.
[0920] To further evaluate the effect of intratumoral injection of
cytokine mRNA in combination with an anti-CTLA-4 antibody, mice
were engrafted with B16F10 tumor cells on right flanks. Mice
received three intratumoral injections with cytokine mRNA mixture
of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB; SEQ ID NOs:
53, 41, 59, and 47) on day 13, 17 and 20 after tumor inoculation.
On day 13, 17, 20 and 24 after tumor inoculation mice also received
intraperitoneal (IP) injections of an anti-CTLA-4 antibody (100
.mu.g/200 .mu.L per mouse; clone 9H10 from InVivoMAb) or the
isotype control antibody (100 .mu.g/200 .mu.L per mouse; Armenian
hamster IgG from BioXCell). Tumor growth of SC tumors as well as
survival was monitored. Groups were as follows: 1) cytokine mRNA
plus anti-CTLA-4 antibody (FIG. 21 E); 2) cytokine mRNA plus
isotype control antibody (FIG. 21F); 3) control mRNA plus
anti-CTLA-4 antibody (FIG. 21G) and 4) control mRNA plus isotype
control antibody (FIG. 21H). Combination therapy of intratumoral
cytokine mRNA and IP-injected anti-CTLA-4 resulted in strongest
anti-tumoral activity with 6 tumor-free mice out of 9 mice on day
60 after tumor inoculation (FIG. 21E). Treatment with cytokine mRNA
plus isotype control antibody (FIG. 21F) induced less anti-tumoral
activity with 2 tumor-free mice out of 9 mice. In comparison, in
the two groups that either received control mRNA plus anti-CTLA-4
antibody (FIG. 21G) or control mRNA plus isotype control antibody
(FIG. 21H), no tumor-free mouse remained at the conclusion of the
study. Percent survival is depicted in FIG. 21I, showing the
highest overall survival in the combination of cytokine mRNA and
anti-CTLA-4 treatment with 67% of mice bearing tumors at the end of
the study (day 70), while 33% of mice treated with cytokine mRNA
alone were tumor free. The results indicate strong antitumor
activity associated with cytokine mRNA alone and cytokine mRNA and
anti-CTLA-4 antibody in this B16F10 tumor model, in which
anti-CTLA-4 antibody alone did not show any anti-tumor
activity.
Example 9--mRNA Cytokine Injection in Multiple Cancer Types
[0921] To evaluate the effect of intratumoral injection of cytokine
mRNA in various types of cancer, five xenograft mouse models--KM12
(CRC), RPMI8226 (Myeloma), NCI-N87 (Gastric), A375 (Melanoma), and
NCI-H1975 (NSCLC)--were tested as described in Example 1. Mice
bearing KM12 (CRC), RPMI8226 (Myeloma), NCI-N87 (Gastric), A375
(Melanoma), and NCI-H1975 (NSCLC) tumors received a single
intratumoral injection with 8 .mu.g (2 .mu.g/target) human cytokine
mRNA mixture of IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB;
SEQ ID NOs: 26, 18, 29, and 23) and the encoded cytokines were
assessed in the tumor at 24 hours. Expression of each of the 4
cytokines of IL-15 sushi (FIG. 22D), IL-12sc (FIG. 22A), GM-CSF
(FIG. 22C) and IFN.alpha. (FIG. 22B) was detected in all five of
the xenograft models with the highest cytokines levels observed in
NCI-H1975, followed by A375, NCI-N87, RPMI8226, and KM12.
Example 10--Dose Dependent Serum Expression of Cytokines after
Intratumoral mRNA Cytokine Injection
[0922] The effect of different intratumoral mRNA doses on the
expression of the encoded cytokines was examined in the serum of
mice engrafted with a single A375 tumor on the right flank. Mice
received a single intratumoral injection of a cytokine mRNA mixture
of human IL-15 sushi, IL-12sc, GM-CSF and IFN.alpha. (ModB; SEQ ID
NOs: 26, 18, 29, and 23). At 6 hours after intratumoral mRNA
injection, serum was collected and cytokine expression was analyzed
by Meso Scale Discovery assay. Dose dependent expression of each of
the mRNA encoded cytokines was observed in the serum from the
highest dose of 80 .mu.g (20 .mu.g) to the lowest dose of 0.0256
.mu.g (0.0064 .mu.g). Results are shown in FIGS. 23A-D.
Example 11--Cytokine mRNA Leads to Expansion of Gp70+CD8 T
Cells
[0923] Mice bearing a single CT26 tumor on one flank received a
four intratumoral injections of a cytokine mRNA mixture of IL-15
sushi, GM-CSF, IFN.alpha., and IL-12sc (ModB; SEQ ID NOs: 53, 41,
59, and 47). Blood was collected 13 days after first intratumoral
mRNA administration and T cells specific for the gp70 tumor antigen
were quantified by flow cytometry. Frequency of T cells specific
for the gp70 tumor antigen in blood were strongly increased in mice
upon intratumoral injection of mRNA cytokines compared to mice that
had received control RNA.
Example 12--Cytokine mRNA Induces Multiple Pro-Inflammatory
Pathways and Increases Immune Infiltrate in Both Treated and
Untreated Tumors
[0924] Mice bearing B16F10 tumors on the left and right flank
received a single intratumoral injection of 80 .mu.g of mRNA (20
.mu.g/target) into right tumor which was initiated with
0.5.times.10{circumflex over ( )}6 cells (treated), while the tumor
initiated with 0.25.times.10{circumflex over ( )}6 cells remained
untreated. At seven days after intratumoral injection of mRNA, both
tumors were collected, and RNA was isolated and subjected to RNA
sequencing analysis. As shown in FIGS. 27A-C, treatment with a
cytokine mRNA mixture of IL-15 sushi, GM-CSF, IFN.alpha., and
IL-12sc (SEQ ID NOs: 59, 53, 41, and 47) upregulated multiple
proinflammatory pathways including a range of IFNgamma response
genes. The upregulation of proinflammatory/IFNgamma related
pathways occurred in both the treated and untreated tumors,
supporting the notion that local intratumoral treatment has
systemic immune modulatory effects.
[0925] Causal network analysis (part of Ingenuity pathway analysis
tool) was performed on 3298 genes that were differentially
expressed (1699 up-regulated and 1599 down-regulated) between
cytokine mRNA treatment and control in injected flank and 4973
genes (2546 up-regulated and 2427 down-regulated) in un-injected
flank to identify changes in signaling pathways that could explain
the observed changes in gene expression. Z scores were calculated
to indicate the changes in pathways, with signs of score indicating
the direction of change (positive sign suggests the activation
whereas negative sign suggests inhibition).
[0926] Hierarchical clustering on expression of 328 genes regulated
by IFNG (295 up-regulation and 33 down-regulation) was performed in
both control and cytokine mRNA treated samples in both injected and
un-injected tumors. Expression of each gene across samples were
z-score normalized. The similarity metric is based on Pearson's
correlation coefficient and complete-linkage is used to generate
dendrogram. See, Table 6.
[0927] Relative abundance of infiltrated immune cells is determined
by calculating the average expression of immune cell-type specific
gene signatures.
TABLE-US-00012 TABLE 6 Treated_cytokine Treated_cytokine
Treated_cytokine Untreated_cytokine Untreated_cytokine
Untreated_cytokine mRNA mix/IgG1 mRNA mix/IgG1 mRNA mix/IgG1 mRNA
mix/IgG1 mRNA mix/IgG1 mRNA mix/IgG1 IFNG_reg- vs. Luc mRNA/ vs Luc
mRNA/ vs Luc mRNA/ vs Luc mRNA/ vs Luc mRNA/ vs Luc mRNA/ Gene
ulation IgG1.foldChange IgG1.RawPValue IgG1.FDR_BH IgG1.FoldChange
IgG1.RawPValue IgG1.FDR_BH ABI1 Activate 1.6776 0.0073 0.0995
1.5218 0.0354 0.1551 ACOD1 Activate 31.6293 3.9652E-06 0.0024
6.1017 0.0096 0.0911 ADGRG2 Activate 1.8174 0.0248 0.2076 1.3902
0.2293 0.4662 ADORA2B Activate 2.9657 0.0044 0.0752 1.4261 0.352
0.6138 AIF1 Activate 6.0406 0.0005 0.0201 4.7598 0.0032 0.057 AIM2
Activate 9.9707 0.000085324 0.0086 3.4835 0.0276 0.1361 ANGPTL4
Activate 2.0707 0.0293 0.2265 2.0904 0.0368 0.1586 APOL6 Activate
10.3994 0.0017 0.0418 10.1341 0.0031 0.0564 APP Activate 2.0312
0.0006 0.0238 2.2382 0.0003 0.0276 ARFGAP3 Activate 1.6535 0.0146
0.1517 1.0201 0.9237 1 ASS1 Activate 3.5414 0.0084 0.1093 -1.0202
0.9668 1 ATF3 Activate 5.5284 0.0006 0.0231 -1.1007 0.8409 1 B2M
Activate 4.7005 0.000092097 0.0089 2.7946 0.0085 0.0859 BACH1
Activate 2.2944 0.0098 0.1179 1.3281 0.3821 0.6482 BATF2 Activate
4.0479 0.0211 0.1885 1.6468 0.4201 0.6889 BCL2L11 Activate 4.2973
0.0057 0.0868 1.1465 0.7946 1 BCL3 Activate 4.4411 0.0167 0.1639
2.5676 0.1413 0.3455 BLNK Activate 4.2753 0.0003 0.0158 3.2008
0.0044 0.0643 BST1 Activate 16.9081 1.3371E-06 0.0016 6.6164 0.0007
0.0334 BTG1 Activate 3.5307 0.0001 0.0102 -1.1775 0.5968 0.8607
C1QA Activate 5.3999 0.0029 0.0588 1.3506 0.5911 0.8558 C1QB
Activate 5.955 0.0104 0.1219 3.531 0.0786 0.2408 C1QC Activate
6.2282 0.0009 0.0307 2.7013 0.0707 0.2284 C2 Activate 2.2866 0.0367
0.2598 2.5908 0.0242 0.1281 C3 Activate 10.2057 0.0043 0.0734
11.6428 0.0044 0.0648 C4B Activate 3.3143 0.0154 0.1562 1.3973
0.5045 0.7768 C5AR1 Activate 6.4343 0.000061281 0.0074 1.8122
0.1729 0.3925 CAMK4 Activate 2.5261 0.0011 0.0335 2.0726 0.012
0.1009 CASP1 Activate 8.2891 0.0079 0.1049 6.7759 0.0214 0.1263
CASP4 Activate 3.9281 0.0015 0.0389 1.2492 0.5969 0.8608 CCL11
Activate 6.225 0.0028 0.0579 9.5207 0.0007 0.0334 CCL17 Activate
3.9738 0.0268 0.2146 3.0432 0.0868 0.2549 CCL2 Activate 5.0444
0.0331 0.2446 1.9159 0.4045 0.6716 CCL22 Activate 5.4223
0.000050981 0.0069 3.6151 0.002 0.0467 CCL3 Activate 8.2215 0.0007
0.0259 4.7966 0.0129 0.1045 CCL4 Activate 8.7234 0.0008 0.0287
2.8285 0.1042 0.2846 CCL5 Activate 19.1375 0.000004935 0.0027
9.4224 0.0004 0.0299 CCL7 Activate 4.7053 0.0068 0.0952 -1.2497
0.6964 0.9457 CCL8 Activate 9.3589 0.0113 0.1283 3.9524 0.1286
0.3243 CCR1 Activate 5.333 0.0012 0.0349 1.7221 0.2823 0.5325 CCR2
Activate 5.8007 0.0025 0.0546 2.1931 0.1766 0.3975 CCR5 Activate
10.8409 0.000010504 0.004 4.8697 0.0025 0.0512 CCRL2 Activate
3.9822 0.002 0.0465 3.6428 0.0056 0.071 CD14 Activate 5.6413 0.0025
0.0546 1.413 0.5406 0.8104 CD2 Activate 13.539 0.0001 0.0095 5.0981
0.0138 0.1086 CD274 Activate 11.0684 0.000096803 0.0091 3.4411
0.038 0.1616 CD38 Activate 5.5697 0.0005 0.0212 1.4645 0.4221
0.6908 CD40 Activate 11.0285 0.0003 0.0158 1.2537 0.7201 0.9637
CD40LG Activate 3.1168 0.0068 0.0952 1.1976 0.6673 0.9224 CD68
Activate 6.1325 0.000040468 0.0063 3.6801 0.0029 0.0544 CD74
Activate 30.4664 0.000057089 0.0072 5.9291 0.0291 0.1392 CD80
Activate 4.1003 0.0005 0.0217 3.5579 0.0026 0.0517 CD86 Activate
6.3927 0.0008 0.027 8.2257 0.0004 0.0289 CDKN2A Activate 1.9017
0.0117 0.1312 -1.2679 0.3579 0.6202 CEBPB Activate 4.4389 0.0007
0.0253 2.1429 0.0784 0.2404 CELSR1 Activate 1.6953 0.0001 0.0107
1.1455 0.3001 0.5534 CERS6 Activate 2.2538 0.0064 0.0927 1.717
0.0763 0.2363 CFB Activate 9.003 0.0001 0.0109 6.2886 0.0018 0.0444
CH25H Activate 4.3757 0.007 0.097 1.9042 0.2435 0.4858 CHRNE
Activate 1.6587 0.0293 0.2263 1.0536 0.8254 1 CIITA Activate 6.2751
0.0008 0.0287 2.736 0.0651 0.2172 CLEC2D Activate 4.9639 0.0002
0.0135 2.6567 0.0223 0.1263 CLEC4E Activate 25.396 2.9823E-07 0.001
7.0201 0.0009 0.0355 CLIC4 Activate 2.2909 0.000025847 0.0053
1.4654 0.0399 0.1658 CMPK2 Activate 2.6988 0.0048 0.0785 1.9213
0.0687 0.2249 CORO1A Activate 5.8653 0.0076 0.1019 2.1612 0.2494
0.4929 CP Activate 2.7012 0.0222 0.1945 1.2703 0.5885 0.8544 CSF1
Activate 5.3648 0.0071 0.0977 2.9314 0.0916 0.2624 CSF2 Activate
2.4249 0.0053 0.0828 1.8261 0.0635 0.2145 CSF2RB Activate 7.8798
0.000014063 0.0041 3.3417 0.008 0.0833 CTSB Activate 2.9396 0.0192
0.1786 -1.5854 0.3271 0.5867 CTSD Activate 1.7662 0.0058 0.0873
1.5654 0.0351 0.1546 CTSH Activate 6.6723 0.0004 0.0189 3.0998
0.0341 0.1523 CTSS Activate 14.2913 0.000052305 0.0069 2.0554
0.2402 0.4813 CXCL1 Activate 2.4631 0.0443 0.2909 2.3701 0.0679
0.223 CXCL10 Activate 4.0615 0.0183 0.174 3.84 0.0314 0.1453 CXCL11
Activate 6.3825 0.0032 0.0623 2.1745 0.2167 0.4494 CXCL12 Activate
4.1992 0.0099 0.1191 3.9497 0.0188 0.1263 CXCL16 Activate 11.7476
0.000012898 0.0041 2.7724 0.052 0.1919 CXCL2 Activate 17.8737
0.000065478 0.0076 2.0435 0.2897 0.5414 CXCL3 Activate 2.5623
0.0157 0.1584 -1.1159 0.7808 1 CXCL9 Activate 10.5652 0.002 0.0475
6.7433 0.0152 0.1139 CYBB Activate 10.2429 0.0001 0.0102 2.4115
0.1288 0.3246 CYLD Activate 2.1952 0.0005 0.0217 1.0366 0.8685 1
CYSLTR2 Activate 4.6876 0.0015 0.0389 -1.3886 0.4896 0.7624 DAPK1
Activate 2.9566 0.0202 0.1837 2.3734 0.0752 0.2341 DAXX Activate
2.5923 0.0255 0.2101 2.7152 0.0271 0.1349 DDIT3 Activate 2.2027
0.0286 0.2233 2.4229 0.0212 0.1263 DDX58 Activate 2.2084 0.0054
0.084 1.2566 0.422 0.6908 DPP4 Activate 4.4101 0.047 0.3002 2.2805
0.2869 0.5383 DTX3L Activate 3.4716 0.000027857 0.0053 1.6387
0.0759 0.2356 EBI3 Activate 5.2118 0.0003 0.0153 2.8451 0.0203
0.1263 ECE1 Activate 3.9089 0.0033 0.0624 1.8673 0.1782 0.3996
EGLN3 Activate 2.9572 0.0465 0.2989 1.0391 0.9453 1 EGR2 Activate
2.4479 0.0155 0.157 2.5764 0.0158 0.1159 ERAP1 Activate 2.5669
0.0033 0.0634 2.2811 0.0134 0.1068 FAM26F Activate 14.7052 0.0008
0.0279 26.6887 0.0002 0.0227 FAS Activate 7.0896 0.0003 0.0169
4.7216 0.0052 0.0695 FCER1G Activate 6.7045 0.0007 0.0254 4.8631
0.0059 0.0728 FGF2 Activate 2.9272 0.0257 0.2106 1.8257 0.2249
0.4606 FGL2 Activate 12.456 9.3027E-06 0.0038 4.9116 0.0036 0.0599
FPR2 Activate 26.1833 0.000096227 0.0091 4.1758 0.0744 0.2328 FTH1
Activate 1.6855 0.0413 0.2791 2.2166 0.0045 0.0657 GBP2 Activate
7.2783 0.0007 0.0248 6.7229 0.0017 0.0437 GBP3 Activate 6.2795
0.0006 0.0222 3.0356 0.0358 0.156 GBP4 Activate 18.7632 0.0002
0.0139 6.7981 0.0154 0.1146 GBP5 Activate 18.254 0.0003 0.0157
7.5534 0.0118 0.1 GBP6 Activate 6.4537 0.0004 0.0187 8.0969 0.0002
0.0266 GBP7 Activate 4.3285 0.0017 0.0427 2.3295 0.0713 0.2296 GCH1
Activate 3.9933 0.0057 0.0867 -2.2318 0.1144 0.3009 GNA13 Activate
1.843 0.0129 0.1403 1.2404 0.3874 0.6539 GSDMD Activate 5.5069
0.000067203 0.0076 4.0075 0.0013 0.0403 GZMB Activate 10.9342 0.001
0.0323 11.0118 0.0018 0.0442 H2-M3 Activate 6.3613 0.0003 0.0169
-1.2831 0.6129 0.8754 H2-Q7 Activate 13.035 0.00007123 0.0078
13.2107 0.0001 0.0209 H2-T23 Activate 9.9835 0.0035 0.0651 1.093
0.9091 1 HCAR2 Activate 5.1405 0.0007 0.0254 3.0731 0.0206 0.1263
HCK Activate 7.0952 0.000025322 0.0053 4.1767 0.0019 0.0455 HIF1A
Activate 1.661 0.0261 0.2122 1.117 0.6345 0.8942 HMOX1 Activate
2.9191 0.0049 0.0797 2.2892 0.0345 0.1532 ICAM1 Activate 5.8185
0.0005 0.0217 4.9939 0.0023 0.0487 ICOSL Activate 1.9545 0.0086
0.1107 1.8592 0.0203 0.1263 IDO1 Activate 2.1676 0.007 0.097 1.5151
0.1535 0.3644 IFI27 Activate 2.1198 0.0058 0.088 1.1685 0.5669
0.8345 IFI44 Activate 10.2739 0.0001 0.0093 5.8893 0.0032 0.057
IFIH1 Activate 3.3922 0.0001 0.0093 1.8886 0.0369 0.1588 IFIT1
Activate 4.7651 0.000038724 0.0062 2.3488 0.0191 0.1263 IFIT2
Activate 2.6547 0.0381 0.266 1.6098 0.3269 0.5865 IFIT3 Activate
6.6433 0.0003 0.0153 2.3076 0.0981 0.2746 IFITM1 Activate 13.8818
0.0017 0.0427 4.0409 0.096 0.2703 IFITM3 Activate 5.3416
0.000049885 0.0069 4.6318 0.0003 0.0278 IFNG Activate 15.8295
0.000030559 0.0055 5.3984 0.0086 0.0862 IFNGR1 Activate 4.6529
0.0003 0.0169 1.1624 0.713 0.9579 IKBKE Activate 3.6191 0.000070796
0.0078 2.1509 0.0151 0.1135 IL10RA Activate 6.6362 0.0006 0.0225
2.2744 0.1259 0.3198 IL12B Activate 1.5869 0.0237 0.2019 1.3356
0.1698 0.3882 IL12RB1 Activate 3.6563 0.0032 0.0623 2.7374 0.0261
0.1323 IL12RB2 Activate 10.8737 0.0001 0.0105 2.7693 0.0898 0.2596
IL15RA Activate 5.6222 0.0002 0.0124 3.263 0.01 0.0929 IL18BP
Activate 13.3799 0.000016505 0.0045 2.6518 0.0808 0.2445 IL18R1
Activate 10.5794 0.0004 0.0172 4.1773 0.0288 0.1387 IL18RAP
Activate 12.8979 1.6368E-06 0.0016 3.9032 0.0058 0.0721 IL1A
Activate 5.0611 0.0002 0.014 2.016 0.1006 0.2792 IL1B Activate
7.1785 0.0017 0.0427 2.9628 0.0846 0.2505 IL1RL1 Activate 3.2501
0.0421 0.2825 2.7191 0.0999 0.2778 IL1RN Activate 11.4696
0.000016637 0.0045 3.5493 0.0183 0.1256 IL27 Activate 5.0377 0.0003
0.0145 2.9655 0.0136 0.1077 IL2RA Activate 12.629 0.000036735
0.0059 9.0232 0.0004 0.03 IL3RA Activate 2.0071 0.0463 0.2977
-2.3554 0.0222 0.1263 INHBA Activate 7.0079 0.0006 0.0238 8.1176
0.0005 0.0316 IRF1 Activate 4.8896 0.0002 0.0136 4.2429 0.0011
0.0383 IRF2 Activate 3.0856 0.0001 0.0102 2.3475 0.0038 0.0609 IRF4
Activate 3.6001 0.0009 0.0303 2.7396 0.0107 0.0955 IRF5 Activate
6.3959 0.0039 0.0697 6.2724 0.0066 0.0767 IRF7 Activate 4.6951
0.0016 0.0408 2.6708 0.0468 0.1806 IRGM1 Activate 3.5604 0.0205
0.1855 3.8887 0.0196 0.1263 ISG15 Activate 6.1635 0.0003 0.0158
2.64 0.0488 0.1845 ISG20 Activate 3.3567 0.0012 0.0349 3.9719
0.0006 0.0322 ITGA4 Activate 2.0304 0.0397 0.272 2.0083 0.055
0.1984 ITGAL Activate 16.3545 0.000032377 0.0056 6.1759 0.0055
0.0707 ITGAM Activate 8.5704 0.0093 0.1151 3.5033 0.1371 0.3385
ITGAX Activate 3.9189 0.0101 0.1202 2.0482 0.185 0.4084 ITGB2
Activate 7.7479 0.0002 0.0124 6.9547 0.0006 0.0332 JAK2 Activate
1.6647 0.0461 0.2976 1.3678 0.2378 0.4779 JUN Activate 1.7589
0.0035 0.0649 -1.1739 0.4037 0.6708 KLF4 Activate 1.907 0.0409
0.2778 1.156 0.6546 0.9116 KLF6 Activate 2.4625 0.0037 0.0672
2.1351 0.0182 0.125 KYNU Activate 3.8871 0.008 0.1057 4.8859 0.0039
0.061 LAG3 Activate 7.4221 0.0002 0.0114 2.156 0.1298 0.3262 LAT2
Activate 2.6441 0.028 0.2208 1.5322 0.3475 0.6094 LCN2 Activate
4.3524 0.0296 0.2275 16.3586 0.0003 0.0276 LCP2 Activate 8.4235
0.0004 0.0193 4.07 0.0205 0.1263 LGALS9 Activate 1.6825 0.0051
0.0817 1.6728 0.0085 0.086 LST1 Activate 7.6841 0.02 0.1832 1.6707
0.5648 0.8328 LTA Activate 2.7386 0.0055 0.0851 2.4968 0.0157
0.1157 LTB Activate 8.1723 0.0014 0.0379 2.3655 0.1846 0.4079 LY6E
Activate 5.1119 0.0028 0.0572 2.8148 0.061 0.2104 LY96 Activate
2.4218 0.0302 0.2305 1.5311 0.3103 0.5661 LYN Activate 5.1219 0.001
0.0325 1.6841 0.2851 0.536 MAP3K8 Activate 7.131 0.0009 0.0302
1.0205 0.9717 1 MEFV Activate 10.8378 0.000019758 0.0047 2.3756
0.0951 0.2688 MMP12 Activate 6.4662 0.0035 0.0647 5.0068 0.015
0.1131 MX1 Activate 6.1489 0.0128 0.1395 2.6469 0.1916 0.4171 MX2
Activate 3.9804 0.0005 0.0205 1.8666 0.1068 0.2889 NAMPT Activate
2.341 0.0066 0.0943 -1.4194 0.2673 0.514 NAPSA Activate 4.3452
0.0003 0.0149 4.7434 0.0003 0.0272 NEURL3 Activate 5.943 0.0009
0.0291 1.9354 0.2066 0.4363 NFKB1 Activate 1.8089 0.0051 0.0815
1.0738 0.7351 0.9751 NFKBIA Activate 4.9409 0.000013016 0.0041
2.4668 0.0097 0.0912 NFKBIZ Activate 2.328 0.0073 0.0995 2.0257
0.0308 0.1436 NGF Activate 3.1687 0.0065 0.0933 3.4968 0.0055
0.0706 NLRC5 Activate 3.4173 0.0109 0.1261 2.2706 0.0985 0.2752
NLRP3 Activate 5.11 0.0007 0.0254 3.4525 0.0111 0.0975 NMI Activate
2.0435 0.0228 0.1979 1.6117 0.1416 0.3459 NOD2 Activate 3.5157
0.000018135 0.0045 2.5449 0.0013 0.0396 NOS2 Activate 26.5216
2.2445E-06 0.0017 24.8128 7.9556E-06 0.0117 NOTCH1 Activate 2.2952
0.0301 0.2303 1.4949 0.3078 0.5625 NR1D1 Activate 1.7995 0.0049
0.0799 1.8784 0.0045 0.065 NUPR1 Activate 2.8421 0.001 0.0318
1.7353 0.0807 0.2444 OAS2 Activate 3.8997 0.0003 0.0154 2.3682
0.0204 0.1263 OAS3 Activate 14.5317 7.7153E-06 0.0034 4.0924 0.0123
0.1019 P2RY14 Activate 16.6314 0.0005 0.0204 4.8513 0.0471 0.1812
P2RY6 Activate 5.352 0.0001 0.0103 2.2094 0.0606 0.2093 PARP9
Activate 3.1267 0.0179 0.1716 -1.1573 0.7644 0.9977 PARVG Activate
6.3047 0.0025 0.0539 1.2154 0.7444 0.9822 PDCD1LG2 Activate 11.6201
2.1928E-06 0.0017 3.9612 0.0045 0.065 PF4 Activate 6.7372 0.0284
0.2226 -2.2437 0.3655 0.6285 PIM1 Activate 4.0708 0.0003 0.0169
2.0732 0.0575 0.2034 PLA2G16 Activate 4.8619 0.001 0.0309 1.3802
0.4886 0.7613 PLAU Activate 3.8214 0.00003401 0.0058 2.1662 0.0131
0.1056 PLEK Activate 5.9274 0.0049 0.0805 2.9561 0.0921 0.2632
PMAIP1 Activate 3.4224 0.0002 0.0134 2.6199 0.0041 0.0627 PRDM1
Activate 3.5702 0.0297 0.2283 4.0335 0.0251 0.13 PRKCD Activate
4.5574 2.2524E-07 0.001 2.0325 0.0066 0.0768 PRKCQ Activate 2.1379
0.0065 0.0932 2.1615 0.0089 0.087 PSMB10 Activate 3.6197 0.005
0.0807 1.4724 0.3976 0.6643 PSMB8 Activate 3.9093 0.0032 0.0615
2.652 0.0388 0.1637 PSMB9 Activate 7.4132 0.0005 0.0197 4.5308
0.009 0.0877 PSME1 Activate 6.1609 0.0001 0.0096 3.9584 0.0037 0.06
PTAFR Activate 8.5218 0.000052564 0.0069 2.2614 0.1024 0.2821 PTGES
Activate 3.3225 0.0241 0.2039 1.61 0.3819 0.6479 PTGS2 Activate
10.9036 0.0075 0.1017 3.9538 0.1309 0.3282 PTX3 Activate 5.271
0.0253 0.2091 1.8833 0.4052 0.672 RAB20 Activate 2.29 0.0257 0.2106
1.1261 0.7537 0.9893 RAC2 Activate 7.9519 0.000098427 0.0091 3.7008
0.0123 0.1021 RIPK1 Activate 1.6822 0.0456 0.2959 -1.1344 0.6373
0.8964 RSAD2 Activate 3.916 0.0003 0.0152 1.6141 0.184 0.407 RTP4
Activate 4.8033 0.0025 0.0537 2.5839 0.0696 0.2269 RUNX2 Activate
5.3191 0.0001 0.0095 2.2697 0.0491 0.185 RUNX3 Activate 5.5652
0.0012 0.0354 5.5875 0.002 0.0467 S100A10 Activate 2.1419 0.001
0.0318 -1.0647 0.7799 1 S100A8 Activate 10.9785 0.0065 0.0931
11.8118 0.0079 0.0832 S100A9 Activate 5.1245 0.0058 0.0879 4.0622
0.0228 0.1263 S1PR3 Activate 2.8084 0.0426 0.2844 4.3054 0.0083
0.0851 SAMHD1 Activate 6.8165 0.000028539 0.0053 5.2676 0.0004
0.0289 SELL Activate 9.0266 0.000036704 0.0059 2.6848 0.0503 0.1879
SEMA4A Activate 4.5461 0.0002 0.0134 7.1376 0.000014188 0.0118
SEPT3 Activate 1.9813 0.0021 0.0484 1.2827 0.2581 0.5036
SERPINB9 Activate 3.6968 0.0068 0.0955 1.3544 0.5306 0.8014
SERPINE1 Activate 2.7348 0.0131 0.142 1.0382 0.9268 1 SERPING1
Activate 8.5956 0.0003 0.0154 5.6206 0.0042 0.063 SHARPIN Activate
1.8222 0.0003 0.0169 -1.1856 0.2897 0.5414 SLAMF1 Activate 4.2282
0.000066073 0.0076 1.8422 0.0753 0.2344 SLC11A1 Activate 8.1631
0.0002 0.0114 6.6594 0.0009 0.0364 SLC15A3 Activate 13.0122 0.0001
0.0093 4.2688 0.0238 0.1278 SLC16A9 Activate 2.2466 0.0273 0.2172
1.6072 0.21 0.4406 SLC28A2 Activate 6.903 0.0001 0.0096 1.4304
0.4466 0.7176 SLFN5 Activate 3.7058 0.0022 0.0493 2.1361 0.0772
0.2383 SMAD7 Activate 3.1247 0.0209 0.187 -1.1526 0.7767 1 SOCS1
Activate 3.9437 0.011 0.1267 3.3365 0.0325 0.1481 SOD2 Activate
2.6759 0.0047 0.0774 3.1489 0.0021 0.0475 SOD3 Activate 2.1257
0.0158 0.1591 1.4255 0.2663 0.5128 SP100 Activate 4.8282 7.0055E-06
0.0032 2.8699 0.0019 0.0452 SP110 Activate 3.7976 0.0057 0.0867
1.1957 0.71 0.9556 SPI1 Activate 10.5793 0.000055966 0.0071 6.5856
0.0014 0.0409 SPP1 Activate 2.5268 0.0212 0.1893 2.4021 0.0384
0.1624 STAT1 Activate 4.2736 0.0089 0.1122 3.9844 0.0176 0.1229
STAT2 Activate 5.4847 0.000013182 0.0041 3.019 0.0035 0.0589 STAT4
Activate 6.3819 0.0038 0.069 1.1576 0.8175 1 STAT6 Activate 1.7399
0.0097 0.1171 1.7712 0.0116 0.0993 STX11 Activate 3.6303 0.0058
0.088 1.7593 0.2306 0.4679 TAP1 Activate 4.588 0.001 0.0323 2.7092
0.0329 0.1493 TAP2 Activate 2.8268 0.0148 0.1526 1.5315 0.3257
0.585 TAPBP Activate 2.5416 0.0274 0.2176 1.7971 0.1801 0.4019
TAPBPL Activate 3.0796 0.0031 0.0609 2.4014 0.0251 0.13 TBX21
Activate 3.8788 0.0008 0.0273 4.1566 0.0008 0.0354 TCIRG1 Activate
2.7899 0.0005 0.0217 1.2508 0.4321 0.7008 TGFBR2 Activate 1.9044
0.031 0.2346 1.2596 0.451 0.7222 THBS1 Activate 2.8135 0.005 0.0807
2.9522 0.0055 0.0707 THEMIS2 Activate 9.3368 0.0011 0.0339 6.5099
0.0079 0.0832 THY1 Activate 5.5745 0.0036 0.0666 3.0999 0.0597
0.2073 TLR1 Activate 3.9534 0.0044 0.0751 4.9709 0.002 0.0463 TLR2
Activate 4.2854 0.0004 0.0173 1.0613 0.8785 1 TLR7 Activate 3.6076
0.0317 0.2384 1.1789 0.7874 1 TLR8 Activate 7.9426 0.0012 0.0349
1.5453 0.4846 0.7574 TLR9 Activate 7.0125 0.0004 0.0182 5.5003
0.0026 0.052 TMEM50B Activate 2.2646 0.0029 0.0584 1.6005 0.089
0.2584 TNF Activate 15.5761 0.000001549 0.0016 3.6025 0.014 0.1094
TNFAIP2 Activate 4.2629 0.0043 0.0737 1.3184 0.5837 0.8504
TNFRSF11A Activate 3.7342 0.0089 0.1124 3.2927 0.0236 0.1273
TNFRSF14 Activate 3.3507 0.0151 0.1547 2.0443 0.1615 0.3761
TNFRSF1B Activate 6.9767 0.0004 0.0187 3.0014 0.0433 0.1723 TNFSF10
Activate 5.9466 0.0008 0.0286 2.8254 0.0505 0.1883 TNFSF12 Activate
4.0396 0.0003 0.0145 3.0636 0.0039 0.061 TNFSF13 Activate 3.7405
0.0229 0.1979 -1.7547 0.3434 0.6048 TNFSF13B Activate 4.2939
0.00009167 0.0089 1.0175 0.96 1 TRAFD1 Activate 7.5123 0.000066493
0.0076 1.4364 0.4415 0.7113 TRIM21 Activate 3.1067 0.0069 0.096
-1.1129 0.7984 1 TXK Activate 3.1599 0.0017 0.0418 1.8261 0.0992
0.2766 UBD Activate 39.4489 3.1101E-06 0.0021 20.5238 0.0001 0.0203
UBE2L6 Activate 3.418 0.002 0.0464 4.4962 0.0005 0.031 USP18
Activate 5.4886 0.0004 0.0192 1.697 0.258 0.5036 VCAM1 Activate
7.3103 0.0003 0.0163 1.2409 0.6812 0.9337 WARS Activate 1.5033
0.0098 0.1179 1.8802 0.0003 0.0284 ZFP36 Activate 3.0067 0.0051
0.0815 -1.1887 0.6585 0.9153 AHCY Inhibit -2.0639 0.0374 0.2628
-1.8643 0.0878 0.2566 AQP1 Inhibit -2.6893 0.0012 0.0354 -2.9843
0.0008 0.0346 AZGP1 Inhibit -3.6306 0.0039 0.0701 -3.72 0.0054
0.0705 CSE1L Inhibit -1.9528 0.0448 0.2931 -4.9001 0.000053442
0.0177 DHX9 Inhibit -1.9049 0.0192 0.1787 -1.3891 0.2439 0.4863
EMID1 Inhibit -2.5566 0.047 0.3003 -1.9661 0.1701 0.3887 FKBP6
Inhibit -4.1867 0.0043 0.0733 -2.2618 0.1075 0.2898 FLT4 Inhibit
-1.7478 0.0248 0.2076 -1.6367 0.0588 0.2058 GMPR Inhibit -2.9853
0.027 0.2154 -5.5877 0.0017 0.0432 GNAO1 Inhibit -2.2497 0.0179
0.1721 -1.0647 0.8565 1 HSP90AB1 Inhibit -1.9951 0.007 0.0974
-1.1404 0.6083 0.8715 IDI1 Inhibit -2.9218 0.004 0.0713 -2.402
0.023 0.1263 IGFBP4 Inhibit -3.3872 0.0211 0.1885 -3.0044 0.0473
0.1815 MIF Inhibit -3.5707 0.0052 0.0828 -1.3189 0.5425 0.8124 MSH2
Inhibit -1.909 0.0328 0.2435 -1.7932 0.0664 0.2198 MYC Inhibit
-1.8764 0.0225 0.1962 -1.5059 0.1507 0.36 PBK Inhibit -4.8198
0.0008 0.0287 -10.4275 0.000012076 0.0117 PCDH17 Inhibit -2.2868
0.0029 0.0588 -1.1447 0.6223 0.8835 PLCG1 Inhibit -1.6389 0.0439
0.2895 1.263 0.3564 0.6189 POLR2F Inhibit -1.7137 0.0139 0.1473
-2.1058 0.0019 0.0456 POMP Inhibit -1.5182 0.047 0.3002 -1.3884
0.1354 0.336 PRPF8 Inhibit -2.0788 0.0159 0.1593 -2.1397 0.0179
0.1239 PTGES2 Inhibit -1.9137 0.0278 0.2201 -1.0746 0.811 1 RAD18
Inhibit -2.1129 0.0032 0.0615 -1.7251 0.0354 0.1551 SF3A1 Inhibit
-1.598 0.0042 0.0729 -1.2281 0.2111 0.4418 SLC12A2 Inhibit -2.8366
0.0039 0.0697 -3.5987 0.0011 0.0373 SMTN Inhibit -1.8432 0.0398
0.2725 -1.2994 0.3927 0.6593 SQLE Inhibit -4.0941 0.0396 0.2717
-4.8892 0.0296 0.1404 SREBF2 Inhibit -2.3929 0.0032 0.0615 -3.5164
0.0001 0.0209 SSBP1 Inhibit -1.5752 0.0094 0.1156 1.0074 0.9665 1
TMEM158 Inhibit -1.6002 0.044 0.2897 1.4394 0.1352 0.3357 TYMP
Inhibit -2.6432 0.0448 0.2928 1.469 0.4412 0.7111 UNC5B Inhibit
-2.3093 0.0267 0.2143 -1.5396 0.2666 0.5132
Example 13--Cytokine mRNA Increases CD4+ and CD8+ T Cells in Both
Treated and Untreated Tumors
[0928] Mice bearing B16F10 tumors on the left and right flank
received a single intratumoral injection of 80 .mu.g of mRNA (20
.mu.g/target) into right tumor which was initiated with
0.5.times.10{circumflex over ( )}6 cells only one of the tumors
(treated), while the other tumor initiated with
0.25.times.10{circumflex over ( )}6 cells remained untreated. At
seven days post intratumoral mRNA injection, both the tumors were
collected and processed for IHC (Immunofluorescence microscopy)
staining with antibodies for CD4+, CD8+, and FoxP3+ cells. Mice
from tumors in FIGS. 28A and 28B were treated with cytokine mRNA,
while mice from tumors in FIGS. 28C and D were treated with control
mRNA. Panels A and C are from the tumors injected with mRNA, while
panels B and D are from the corresponding contralateral tumor not
injected. (FIGS. 28A-D). For both the cytokine mRNA treated and
control mRNA treated groups 5 tumors injected with RNA and the
corresponding 5 contralateral tumors uninjected were subjected to
immunofluorescent staining for CD4+, CD8+, FOXP3+ cells. The
relative frequency and ratio of cells are plotted in FIGS. 28E, F,
G. The results indicate that a cytokine mRNA mixture of IL-15
sushi, GM-CSF, IFN.alpha., and IL-12sc (SEQ ID NOs: 59, 53, 41, and
47) increases CD8+ and CD4+ T cells infiltration leading to
altering the CD8+/Treg ratio. An increase in immune infiltration
occurred in both the treated and untreated tumors, supporting the
notion that local intratumoral treatment has systemic immune
modulatory effects.
Example 14--mRNA is Expressed in Both Tumor and Infiltrating Immune
Cells
[0929] Mice bearing a single B16F10 tumor received a single
intratumoral injection with mRNA encoding the Thy1.1 protein (FIG.
29A-G). Approximately 18 hrs after intratumoral injection the tumor
was dissociated, stained with a panel of antibodies and flow
cytometry was performed to define cells expressing Thy1.1 protein.
The results indicate that both tumor and immune cells take up and
express the mRNA.
Example 15--Dose Dependent Tumor Expression and PD Response
Following Intratumoral Cytokine mRNA Injection
[0930] Mice bearing B16F10 tumors received a single mRNA injection
with 80, 8 or 0.8 .mu.g of a cytokine mRNA mixture of IL-15 sushi,
GM-CSF, IFN.alpha., and IL-12sc (SEQ ID Nos: 59, 53, 41, and 47).
Approximately 6 hrs after the intratumoral injection, the tumor was
removed and lysed, and levels of IL-15 sushi, GM-CSF, IFN.alpha.,
and IL-12sc, IFNgamma and IP-10 were quantified in the tumor
lysate. FIGS. 30A-F show that the cytokine mRNA was expressed
intratumorally in a dose-dependent manner.
[0931] In a separate experiment, mice bearing B16F10 tumors
received a single mRNA injection with 80, 8 or 0.8ug of a cytokine
mRNA mixture of IL-15 sushi, GM-CSF, IFN.alpha., and IL-12sc (SEQ
ID Nos: 59, 53, 41, and 47). At seven days following intratumoral
cytokine mRNA injection, the tumors were dissociated, stained with
a panel of antibodies, and analyzed by flow cytometry. The
antibodies used were against murine: CD45, CD4, CD3, CD8, CD279,
IFNgamma, TNFalpha, FOXP3, Granzyme B). The results indicate that
treatment with the cytokine mRNA mixture altered the CD8+/Treg
ratio (FIG. 31A-B), led to increased frequency of polyfunctional
CD8+ T cells in the tumor microenvironment (FIG. 31C-D), increased
PD-L1 on infiltrating myeloid cells (FIG. 31E), and increased
levels of PD-1 on infiltrating CD8+ T cells (FIG. 31F).
[0932] In a further experiment, mice bearing B16F10 tumors on the
left and right flank received a single intratumoral injection of a
cytokine mRNA mixture of IL-15 sushi, GM-CSF, IFN.alpha., and
IL-12sc (SEQ ID Nos: SEQ ID NOs: 59, 53, 41, and 47) or control
mRNA into only one of the tumors (treated), while the other tumor
remained untreated. At seven days post intratumoral mRNA injection,
the injected tumor was collected and processed for flow cytometry
staining with antibodies for CD45+, CD8+, CD3+, and Granzyme B. The
results indicate that the cytokine mRNA mixture increased the
frequency of intratumoral Granzyme B CD8+ T cells in the tumor
(FIG. 31G-H).
Example 16--Intratumorally Injected mRNA is Primarily Expressed in
the Tumor
[0933] Mice bearing B16F10 tumors received a single intratumoral
injection of 50 .mu.g mRNA encoding firefly luciferase. At 6 and
24-hour time points, 3 mice were sacrificed and tumor, liver,
spleen, tumor draining lymph node (TDLN) and non-tumor draining
lymph node (NDLN) were analyzed ex vivo for luciferase expression.
FIGS. 32A-B show that luciferase expression was highest in the
tumor, in which expression was greater than 100-fold above any
other tissue.
Example 17--CD4+, CD8+, and NK Cells Contribute to the Anti-Tumor
Activity of Cytokine mRNA in B16F10 Model
[0934] Groups of mice bearing B16F10 tumors were treated with 100
.mu.g of depleting antibodies (anti-CD4, anti-CD8, anti-NK1.1) by
intraperitoneal injection once a week for 4 weeks total. Antibody
mediated cellular depletion was initiated one day prior to
treatment with an 80 .mu.g cytokine mRNA mixture of IL-15 sushi,
GM-CSF, IFN.alpha., and IL-12sc (SEQ ID Nos: 59, 53, 41, and 47).
The effect of antibody depletion on overall survival was monitored.
The results, shown in FIG. 34, indicate that individual depletion
CD8+, CD4+, or NK cells reduced, to varying degrees, the anti-tumor
activity and overall survival of the cytokine mRNA.
Example 18--Antitumor Activity of Cytokine mRNAs is not Observed in
IFN-Gamma-Deficient Mice
[0935] WT C57BL6J mice and C57BL6J mice deficient for the murine
IFN.gamma. (IFN.gamma. KO) were implanted with B16F10 tumor cells
as described in Example 1. Mice were treated by intratumoral
injection with 80 .mu.g (20 .mu.g/target) cytokine mRNA mixture of
IL-15 sushi, GM-CSF, IFN.alpha., and IL-12sc (SEQ ID Nos: 59, 53,
41, and 47) or 80 .mu.g control mRNA, and overall survival was
monitored. The results, depicted in FIG. 35, indicate that mice
lacking IFN.gamma. did not exhibit a detectable antitumor response
when treated with the cytokine mRNA.
Sequence CWU 1
1
88152DNAArtificial sequenceModA 5' UTR 1gggcgaacta gtattcttct
ggtccccaca gactcagaga gaacccgcca cc 52252RNAArtificial sequenceModA
5' UTR 2gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca cc
523145DNAArtificial sequenceModB 5' UTR 3ggaataaact agtctcaaca
caacatatac aaaacaaacg aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat
ttaaatcatt tcttttaaag caaaagcaat tttctgaaaa 120ttttcaccat
ttacgaacga tagcc 1454145RNAArtificial sequenceModB 5' UTR
4ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc aaucaagcau
60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau uuucugaaaa
120uuuucaccau uuacgaacga uagcc 145552DNAArtificial
sequenceAlternative Mod 5' UTR 5agacgaacta gtattcttct ggtccccaca
gactcagaga gaacccgcca cc 52652RNAArtificial sequenceAlternative Mod
5' UTR 6agacgaacua guauucuucu gguccccaca gacucagaga gaacccgcca cc
527427DNAArtificial sequenceModA/B 3' UTR 7ctcgagctgg tactgcatgc
acgcaatgct agctgcccct ttcccgtcct gggtaccccg 60agtctccccc gacctcgggt
cccaggtatg ctcccacctc cacctgcccc actcaccacc 120tctgctagtt
ccagacacct cccaagcacg cagcaatgca gctcaaaacg cttagcctag
180ccacaccccc acgggaaaca gcagtgatta acctttagca ataaacgaaa
gtttaactaa 240gctatactaa ccccagggtt ggtcaatttc gtgccagcca
caccgagacc tggtccagag 300tcgctagccg cgtcgctaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaagca tatgactaaa 360aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 420aaaaaaa
4278427RNAArtificial sequenceModA/B 3' UTR 8cucgagcugg uacugcaugc
acgcaaugcu agcugccccu uucccguccu ggguaccccg 60agucuccccc gaccucgggu
cccagguaug cucccaccuc caccugcccc acucaccacc 120ucugcuaguu
ccagacaccu cccaagcacg cagcaaugca gcucaaaacg cuuagccuag
180ccacaccccc acgggaaaca gcagugauua accuuuagca auaaacgaaa
guuuaacuaa 240gcuauacuaa ccccaggguu ggucaauuuc gugccagcca
caccgagacc ugguccagag 300ucgcuagccg cgucgcuaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaagca uaugacuaaa 360aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 420aaaaaaa
4279153PRTHomo sapiens 9Met Tyr Arg Met Gln Leu Leu Ser Cys Ile Ala
Leu Ser Leu Ala Leu1 5 10 15Val Thr Asn Ser Ala Pro Thr Ser Ser Ser
Thr Lys Lys Thr Gln Leu 20 25 30Gln Leu Glu His Leu Leu Leu Asp Leu
Gln Met Ile Leu Asn Gly Ile 35 40 45Asn Asn Tyr Lys Asn Pro Lys Leu
Thr Arg Met Leu Thr Phe Lys Phe 50 55 60Tyr Met Pro Lys Lys Ala Thr
Glu Leu Lys His Leu Gln Cys Leu Glu65 70 75 80Glu Glu Leu Lys Pro
Leu Glu Glu Val Leu Asn Leu Ala Gln Ser Lys 85 90 95Asn Phe His Leu
Arg Pro Arg Asp Leu Ile Ser Asn Ile Asn Val Ile 100 105 110Val Leu
Glu Leu Lys Gly Ser Glu Thr Thr Phe Met Cys Glu Tyr Ala 115 120
125Asp Glu Thr Ala Thr Ile Val Glu Phe Leu Asn Arg Trp Ile Thr Phe
130 135 140Cys Gln Ser Ile Ile Ser Thr Leu Thr145 15010465DNAHomo
sapiens 10atgtacagga tgcaactcct gtcttgcatt gcactaagtc ttgcacttgt
cacaaacagt 60gcacctactt caagttctac aaagaaaaca cagctacaac tggagcattt
actgctggat 120ttacagatga ttttgaatgg aattaataat tacaagaatc
ccaaactcac caggatgctc 180acatttaagt tttacatgcc caagaaggcc
acagaactga aacatcttca gtgtctagaa 240gaagaactca aacctctgga
ggaagtgcta aatttagctc aaagcaaaaa ctttcactta 300agacccaggg
acttaatcag caatatcaac gtaatagttc tggaactaaa gggatctgaa
360acaacattca tgtgtgaata tgctgatgag acagcaacca ttgtagaatt
tctgaacaga 420tggattacct tttgtcaaag catcatctca acactgactt gatga
46511465DNAArtificial sequenceHuman optimized IL-2 11atgtacagaa
tgcagctgct gtcttgcatt gctctttctc ttgctcttgt gacaaattct 60gctccaacat
cttcttcaac aaagaaaaca cagcttcagc ttgaacacct tcttcttgat
120cttcagatga ttctgaatgg aatcaacaat tacaaaaatc caaaactgac
aagaatgctg 180acatttaaat tttacatgcc aaagaaagca acagaactga
aacaccttca gtgccttgaa 240gaagaactga aacctctgga agaagtgctg
aatctggctc agagcaaaaa ttttcacctg 300agaccaagag atctgatcag
caacatcaat gtgattgtgc tggaactgaa aggatctgaa 360acaacattca
tgtgtgaata tgctgatgaa acagcaacaa ttgtggaatt tctgaacaga
420tggatcacat tttgccagtc aatcatttca acactgacat gatga
46512465RNAHomo sapiens 12auguacagga ugcaacuccu gucuugcauu
gcacuaaguc uugcacuugu cacaaacagu 60gcaccuacuu caaguucuac aaagaaaaca
cagcuacaac uggagcauuu acugcuggau 120uuacagauga uuuugaaugg
aauuaauaau uacaagaauc ccaaacucac caggaugcuc 180acauuuaagu
uuuacaugcc caagaaggcc acagaacuga aacaucuuca gugucuagaa
240gaagaacuca aaccucugga ggaagugcua aauuuagcuc aaagcaaaaa
cuuucacuua 300agacccaggg acuuaaucag caauaucaac guaauaguuc
uggaacuaaa gggaucugaa 360acaacauuca ugugugaaua ugcugaugag
acagcaacca uuguagaauu ucugaacaga 420uggauuaccu uuugucaaag
caucaucuca acacugacuu gauga 46513465RNAArtificial sequenceHuman
optimized IL-2 13auguacagaa ugcagcugcu gucuugcauu gcucuuucuc
uugcucuugu gacaaauucu 60gcuccaacau cuucuucaac aaagaaaaca cagcuucagc
uugaacaccu ucuucuugau 120cuucagauga uucugaaugg aaucaacaau
uacaaaaauc caaaacugac aagaaugcug 180acauuuaaau uuuacaugcc
aaagaaagca acagaacuga aacaccuuca gugccuugaa 240gaagaacuga
aaccucugga agaagugcug aaucuggcuc agagcaaaaa uuuucaccug
300agaccaagag aucugaucag caacaucaau gugauugugc uggaacugaa
aggaucugaa 360acaacauuca ugugugaaua ugcugaugaa acagcaacaa
uuguggaauu ucugaacaga 420uggaucacau uuugccaguc aaucauuuca
acacugacau gauga 46514539PRTArtificial sequenceHuman IL-12sc 14Met
Cys His Gln Gln Leu Val Ile Ser Trp Phe Ser Leu Val Phe Leu1 5 10
15Ala Ser Pro Leu Val Ala Ile Trp Glu Leu Lys Lys Asp Val Tyr Val
20 25 30Val Glu Leu Asp Trp Tyr Pro Asp Ala Pro Gly Glu Met Val Val
Leu 35 40 45Thr Cys Asp Thr Pro Glu Glu Asp Gly Ile Thr Trp Thr Leu
Asp Gln 50 55 60Ser Ser Glu Val Leu Gly Ser Gly Lys Thr Leu Thr Ile
Gln Val Lys65 70 75 80Glu Phe Gly Asp Ala Gly Gln Tyr Thr Cys His
Lys Gly Gly Glu Val 85 90 95Leu Ser His Ser Leu Leu Leu Leu His Lys
Lys Glu Asp Gly Ile Trp 100 105 110Ser Thr Asp Ile Leu Lys Asp Gln
Lys Glu Pro Lys Asn Lys Thr Phe 115 120 125Leu Arg Cys Glu Ala Lys
Asn Tyr Ser Gly Arg Phe Thr Cys Trp Trp 130 135 140Leu Thr Thr Ile
Ser Thr Asp Leu Thr Phe Ser Val Lys Ser Ser Arg145 150 155 160Gly
Ser Ser Asp Pro Gln Gly Val Thr Cys Gly Ala Ala Thr Leu Ser 165 170
175Ala Glu Arg Val Arg Gly Asp Asn Lys Glu Tyr Glu Tyr Ser Val Glu
180 185 190Cys Gln Glu Asp Ser Ala Cys Pro Ala Ala Glu Glu Ser Leu
Pro Ile 195 200 205Glu Val Met Val Asp Ala Val His Lys Leu Lys Tyr
Glu Asn Tyr Thr 210 215 220Ser Ser Phe Phe Ile Arg Asp Ile Ile Lys
Pro Asp Pro Pro Lys Asn225 230 235 240Leu Gln Leu Lys Pro Leu Lys
Asn Ser Arg Gln Val Glu Val Ser Trp 245 250 255Glu Tyr Pro Asp Thr
Trp Ser Thr Pro His Ser Tyr Phe Ser Leu Thr 260 265 270Phe Cys Val
Gln Val Gln Gly Lys Ser Lys Arg Glu Lys Lys Asp Arg 275 280 285Val
Phe Thr Asp Lys Thr Ser Ala Thr Val Ile Cys Arg Lys Asn Ala 290 295
300Ser Ile Ser Val Arg Ala Gln Asp Arg Tyr Tyr Ser Ser Ser Trp
Ser305 310 315 320Glu Trp Ala Ser Val Pro Cys Ser Gly Ser Ser Gly
Gly Gly Gly Ser 325 330 335Pro Gly Gly Gly Ser Ser Arg Asn Leu Pro
Val Ala Thr Pro Asp Pro 340 345 350Gly Met Phe Pro Cys Leu His His
Ser Gln Asn Leu Leu Arg Ala Val 355 360 365Ser Asn Met Leu Gln Lys
Ala Arg Gln Thr Leu Glu Phe Tyr Pro Cys 370 375 380Thr Ser Glu Glu
Ile Asp His Glu Asp Ile Thr Lys Asp Lys Thr Ser385 390 395 400Thr
Val Glu Ala Cys Leu Pro Leu Glu Leu Thr Lys Asn Glu Ser Cys 405 410
415Leu Asn Ser Arg Glu Thr Ser Phe Ile Thr Asn Gly Ser Cys Leu Ala
420 425 430Ser Arg Lys Thr Ser Phe Met Met Ala Leu Cys Leu Ser Ser
Ile Tyr 435 440 445Glu Asp Leu Lys Met Tyr Gln Val Glu Phe Lys Thr
Met Asn Ala Lys 450 455 460Leu Leu Met Asp Pro Lys Arg Gln Ile Phe
Leu Asp Gln Asn Met Leu465 470 475 480Ala Val Ile Asp Glu Leu Met
Gln Ala Leu Asn Phe Asn Ser Glu Thr 485 490 495Val Pro Gln Lys Ser
Ser Leu Glu Glu Pro Asp Phe Tyr Lys Thr Lys 500 505 510Ile Lys Leu
Cys Ile Leu Leu His Ala Phe Arg Ile Arg Ala Val Thr 515 520 525Ile
Asp Arg Val Met Ser Tyr Leu Asn Ala Ser 530 535151623DNAArtificial
sequenceHuman non-optimized IL-12sc 15atgtgtcacc agcagttggt
catctcttgg ttttccctgg tttttctggc atctcccctc 60gtggccatat gggaactgaa
gaaagatgtt tatgtcgtag aattggattg gtatccggat 120gcccctggag
aaatggtggt cctcacctgt gacacccctg aagaagatgg tatcacctgg
180accttggacc agagcagtga ggtcttaggc tctggcaaaa ccctgaccat
ccaagtcaaa 240gagtttggag atgctggcca gtacacctgt cacaaaggag
gcgaggttct aagccattcg 300ctcctgctgc ttcacaaaaa ggaagatgga
atttggtcca ctgatatttt aaaggaccag 360aaagaaccca aaaataagac
ctttctaaga tgcgaggcca agaattattc tggacgtttc 420acctgctggt
ggctgacgac aatcagtact gatttgacat tcagtgtcaa aagcagcaga
480gggtcttctg acccccaagg ggtgacgtgc ggagctgcta cactctctgc
agagagagtc 540agaggggaca acaaggagta tgagtactca gtggagtgcc
aggaggacag tgcctgccca 600gctgctgagg agagtctgcc cattgaggtc
atggtggatg ccgttcacaa gctcaagtat 660gaaaactaca ccagcagctt
cttcatcagg gacatcatca aacctgaccc acccaagaac 720ttgcagctga
agccattaaa gaattctcgg caggtggagg tcagctggga gtaccctgac
780acctggagta ctccacattc ctacttctcc ctgacattct gcgttcaggt
ccagggcaag 840agcaagagag aaaagaaaga tagagtcttc acggacaaga
cctcagccac ggtcatctgc 900cgcaaaaatg ccagcattag cgtgcgggcc
caggaccgct actatagctc atcttggagc 960gaatgggcat ctgtgccctg
cagtggctct agcggagggg gaggctctcc tggcggggga 1020tctagcagaa
acctccccgt ggccactcca gacccaggaa tgttcccatg ccttcaccac
1080tcccaaaacc tgctgagggc cgtcagcaac atgctccaga aggccagaca
aactctagaa 1140ttttaccctt gcacttctga ggaaattgat catgaagata
tcacaaaaga taaaaccagc 1200acagtggagg cctgtttacc attggaatta
accaagaatg agagttgcct aaattccaga 1260gagacctctt tcataactaa
tgggagttgc ctggcctcca gaaagacctc ttttatgatg 1320gccctgtgcc
ttagtagtat ttatgaagac ttgaagatgt accaggtgga gttcaagacc
1380atgaatgcaa agcttctgat ggatcctaag aggcagatct ttctagatca
aaacatgctg 1440gcagttattg atgagctgat gcaggccctg aatttcaaca
gtgagactgt gccacaaaaa 1500tcctcccttg aagaaccgga tttttataaa
actaaaatca agctctgcat acttcttcat 1560gctttcagaa ttcgggcagt
gactattgat agagtgatga gctatctgaa tgcttcctga 1620tga
1623161623DNAArtificial sequenceHuman optimized IL-12sc
16atgtgtcacc agcagctggt gatctcatgg ttctccctgg tatttctggc atctcctctt
60gtcgcaatct gggaactgaa gaaagacgtg tatgtcgttg agctcgactg gtatccggat
120gcgcctggcg agatggtggt gctgacctgt gacaccccag aggaggatgg
gatcacttgg 180acccttgatc aatcctccga agtgctcggg tctggcaaga
ctctgaccat acaagtgaaa 240gagtttggcg atgccgggca gtacacttgc
cataagggcg gagaagttct gtcccactca 300ctgctgctgc tgcacaagaa
agaggacgga atttggagta ccgatatcct gaaagatcag 360aaagagccca
agaacaaaac cttcttgcgg tgcgaagcca agaactactc agggagattt
420acttgttggt ggctgacgac gatcagcacc gatctgactt tctccgtgaa
atcaagtagg 480ggatcatctg accctcaagg agtcacatgt ggagcggcta
ctctgagcgc tgaacgcgta 540agaggggaca ataaggagta cgagtatagc
gttgagtgcc aagaggatag cgcatgcccc 600gccgccgaag aatcattgcc
cattgaagtg atggtggatg ctgtacacaa gctgaagtat 660gagaactaca
caagctcctt cttcatccgt gacatcatca aaccagatcc tcctaagaac
720ctccagctta aacctctgaa gaactctaga caggtggaag tgtcttggga
gtatcccgac 780acctggtcta caccacattc ctacttcagt ctcacattct
gcgttcaggt acagggcaag 840tccaaaaggg agaagaagga tcgggtcttt
acagataaaa caagtgccac cgttatatgc 900cggaagaatg cctctatttc
tgtgcgtgcg caggacagat actatagcag ctcttggagt 960gaatgggcca
gtgtcccatg ttcagggtca tccggtggtg gcggcagccc cggaggcggt
1020agctccagaa atctccctgt ggctacacct gatccaggca tgtttccctg
tttgcaccat 1080agccaaaacc tcctgagagc agtcagcaac atgctccaga
aagctagaca aacactggaa 1140ttctacccat gcacctccga ggaaatagat
cacgaggata tcactaagga caaaacaagc 1200actgtcgaag catgccttcc
cttggaactg acaaagaacg agagttgcct taattcaaga 1260gaaacatctt
tcattacaaa cggtagctgc ttggcaagca gaaaaacatc ttttatgatg
1320gccctttgtc tgagcagtat ttatgaggat ctcaaaatgt accaggtgga
gtttaagacc 1380atgaatgcca agctgctgat ggacccaaag agacagattt
tcctcgatca gaatatgctg 1440gctgtgattg atgaactgat gcaggccttg
aatttcaaca gcgaaaccgt tccccagaaa 1500agcagtcttg aagaacctga
cttttataag accaagatca aactgtgtat tctcctgcat 1560gcctttagaa
tcagagcagt cactatagat agagtgatgt cctacctgaa tgcttcctga 1620tga
1623171623RNAArtificial sequenceHuman non-optimized IL-12sc
17augugucacc agcaguuggu caucucuugg uuuucccugg uuuuucuggc aucuccccuc
60guggccauau gggaacugaa gaaagauguu uaugucguag aauuggauug guauccggau
120gccccuggag aaaugguggu ccucaccugu gacaccccug aagaagaugg
uaucaccugg 180accuuggacc agagcaguga ggucuuaggc ucuggcaaaa
cccugaccau ccaagucaaa 240gaguuuggag augcuggcca guacaccugu
cacaaaggag gcgagguucu aagccauucg 300cuccugcugc uucacaaaaa
ggaagaugga auuuggucca cugauauuuu aaaggaccag 360aaagaaccca
aaaauaagac cuuucuaaga ugcgaggcca agaauuauuc uggacguuuc
420accugcuggu ggcugacgac aaucaguacu gauuugacau ucagugucaa
aagcagcaga 480gggucuucug acccccaagg ggugacgugc ggagcugcua
cacucucugc agagagaguc 540agaggggaca acaaggagua ugaguacuca
guggagugcc aggaggacag ugccugccca 600gcugcugagg agagucugcc
cauugagguc augguggaug ccguucacaa gcucaaguau 660gaaaacuaca
ccagcagcuu cuucaucagg gacaucauca aaccugaccc acccaagaac
720uugcagcuga agccauuaaa gaauucucgg cagguggagg ucagcuggga
guacccugac 780accuggagua cuccacauuc cuacuucucc cugacauucu
gcguucaggu ccagggcaag 840agcaagagag aaaagaaaga uagagucuuc
acggacaaga ccucagccac ggucaucugc 900cgcaaaaaug ccagcauuag
cgugcgggcc caggaccgcu acuauagcuc aucuuggagc 960gaaugggcau
cugugcccug caguggcucu agcggagggg gaggcucucc uggcggggga
1020ucuagcagaa accuccccgu ggccacucca gacccaggaa uguucccaug
ccuucaccac 1080ucccaaaacc ugcugagggc cgucagcaac augcuccaga
aggccagaca aacucuagaa 1140uuuuacccuu gcacuucuga ggaaauugau
caugaagaua ucacaaaaga uaaaaccagc 1200acaguggagg ccuguuuacc
auuggaauua accaagaaug agaguugccu aaauuccaga 1260gagaccucuu
ucauaacuaa ugggaguugc cuggccucca gaaagaccuc uuuuaugaug
1320gcccugugcc uuaguaguau uuaugaagac uugaagaugu accaggugga
guucaagacc 1380augaaugcaa agcuucugau ggauccuaag aggcagaucu
uucuagauca aaacaugcug 1440gcaguuauug augagcugau gcaggcccug
aauuucaaca gugagacugu gccacaaaaa 1500uccucccuug aagaaccgga
uuuuuauaaa acuaaaauca agcucugcau acuucuucau 1560gcuuucagaa
uucgggcagu gacuauugau agagugauga gcuaucugaa ugcuuccuga 1620uga
1623181623RNAArtificial sequenceHuman optimized IL-12sc
18augugucacc agcagcuggu gaucucaugg uucucccugg uauuucuggc aucuccucuu
60gucgcaaucu gggaacugaa gaaagacgug uaugucguug agcucgacug guauccggau
120gcgccuggcg agaugguggu gcugaccugu gacaccccag aggaggaugg
gaucacuugg 180acccuugauc aauccuccga agugcucggg ucuggcaaga
cucugaccau acaagugaaa 240gaguuuggcg augccgggca guacacuugc
cauaagggcg gagaaguucu gucccacuca 300cugcugcugc ugcacaagaa
agaggacgga auuuggagua ccgauauccu gaaagaucag 360aaagagccca
agaacaaaac cuucuugcgg ugcgaagcca agaacuacuc agggagauuu
420acuuguuggu ggcugacgac gaucagcacc gaucugacuu ucuccgugaa
aucaaguagg 480ggaucaucug acccucaagg agucacaugu ggagcggcua
cucugagcgc ugaacgcgua 540agaggggaca auaaggagua cgaguauagc
guugagugcc aagaggauag cgcaugcccc 600gccgccgaag aaucauugcc
cauugaagug augguggaug cuguacacaa gcugaaguau 660gagaacuaca
caagcuccuu cuucauccgu gacaucauca aaccagaucc uccuaagaac
720cuccagcuua aaccucugaa gaacucuaga cagguggaag ugucuuggga
guaucccgac 780accuggucua caccacauuc cuacuucagu cucacauucu
gcguucaggu acagggcaag 840uccaaaaggg agaagaagga ucgggucuuu
acagauaaaa caagugccac cguuauaugc 900cggaagaaug ccucuauuuc
ugugcgugcg caggacagau acuauagcag cucuuggagu 960gaaugggcca
gugucccaug uucaggguca uccgguggug gcggcagccc cggaggcggu
1020agcuccagaa aucucccugu ggcuacaccu gauccaggca uguuucccug
uuugcaccau 1080agccaaaacc uccugagagc agucagcaac augcuccaga
aagcuagaca aacacuggaa 1140uucuacccau gcaccuccga ggaaauagau
cacgaggaua ucacuaagga caaaacaagc 1200acugucgaag caugccuucc
cuuggaacug acaaagaacg agaguugccu uaauucaaga 1260gaaacaucuu
ucauuacaaa cgguagcugc uuggcaagca gaaaaacauc uuuuaugaug
1320gcccuuuguc ugagcaguau uuaugaggau cucaaaaugu accaggugga
guuuaagacc 1380augaaugcca agcugcugau ggacccaaag agacagauuu
uccucgauca gaauaugcug 1440gcugugauug augaacugau gcaggccuug
aauuucaaca gcgaaaccgu uccccagaaa 1500agcagucuug aagaaccuga
cuuuuauaag accaagauca aacuguguau ucuccugcau 1560gccuuuagaa
ucagagcagu cacuauagau agagugaugu ccuaccugaa ugcuuccuga 1620uga
162319188PRTHomo sapiens 19Met Ala Leu Thr Phe Ala Leu Leu Val Ala
Leu Leu Val Leu Ser Cys1 5 10 15Lys Ser Ser Cys Ser Val Gly Cys Asp
Leu Pro Gln Thr His Ser Leu 20 25 30Gly Ser Arg Arg Thr Leu Met Leu
Leu Ala Gln Met Arg Arg Ile Ser 35 40 45Leu Phe Ser Cys Leu Lys Asp
Arg His Asp Phe Gly Phe Pro Gln Glu 50 55 60Glu Phe Gly Asn Gln Phe
Gln Lys Ala Glu Thr Ile Pro Val Leu His65 70 75 80Glu Met Ile Gln
Gln Ile Phe Asn Leu Phe Ser Thr Lys Asp Ser Ser 85 90 95Ala Ala Trp
Asp Glu Thr Leu Leu Asp Lys Phe Tyr Thr Glu Leu Tyr 100 105 110Gln
Gln Leu Asn Asp Leu Glu Ala Cys Val Ile Gln Gly Val Gly Val 115 120
125Thr Glu Thr Pro Leu Met Lys Glu Asp Ser Ile Leu Ala Val Arg Lys
130 135 140Tyr Phe Gln Arg Ile Thr Leu Tyr Leu Lys Glu Lys Lys Tyr
Ser Pro145 150 155 160Cys Ala Trp Glu Val Val Arg Ala Glu Ile Met
Arg Ser Phe Ser Leu 165 170 175Ser Thr Asn Leu Gln Glu Ser Leu Arg
Ser Lys Glu 180 18520570DNAHomo sapiens 20atggccttga cctttgcttt
actggtggcc ctcctggtgc tcagctgcaa gtcaagctgc 60tctgtgggct gtgatctgcc
tcaaacccac agcctgggta gcaggaggac cttgatgctc 120ctggcacaga
tgaggagaat ctctcttttc tcctgcttga aggacagaca tgactttgga
180tttccccagg aggagtttgg caaccagttc caaaaggctg aaaccatccc
tgtcctccat 240gagatgatcc agcagatctt caaccttttc agcacaaagg
actcatctgc tgcttgggat 300gagaccctcc tagacaaatt ctacactgaa
ctctaccagc agctgaatga cctggaagcc 360tgtgtgatac agggggtggg
ggtgacagag actcccctga tgaaggagga ctccattctg 420gctgtgagga
aatacttcca aagaatcact ctctatctga aagagaagaa atacagccct
480tgtgcctggg aggttgtcag agcagaaatc atgagatctt tttctttgtc
aacaaacttg 540caagaaagtt taagaagtaa ggaatgatga
57021570DNAArtificial sequenceHuman optimized IFN-alpha-2b
21atggccctga cttttgccct tctcgtggct ttgttggtgc tgagttgcaa atcttcctgt
60agtgtcggat gtgatctgcc tcaaacccac agtctgggat ctaggagaac actgatgctg
120ttggcacaga tgaggagaat tagcctcttt tcctgcctga aggatagaca
tgacttcggc 180tttccccaag aggagtttgg caatcagttc cagaaagcgg
aaacgattcc cgttctgcac 240gagatgatcc agcagatctt caacctcttt
tcaaccaaag acagctcagc agcctgggat 300gagacactgc tggacaaatt
ctacacagaa ctgtatcagc agcttaacga tctggaggca 360tgcgtgatcc
aaggggttgg tgtgactgaa actccgctta tgaaggagga ctccattctg
420gctgtacgga agtacttcca gagaataacc ctctatctga aggagaagaa
gtactcacca 480tgtgcttggg aagtcgtgag agccgaaatc atgagatcct
tcagccttag caccaatctc 540caggaatctc tgagaagcaa agagtgatga
57022570RNAHomo sapiens 22auggccuuga ccuuugcuuu acugguggcc
cuccuggugc ucagcugcaa gucaagcugc 60ucugugggcu gugaucugcc ucaaacccac
agccugggua gcaggaggac cuugaugcuc 120cuggcacaga ugaggagaau
cucucuuuuc uccugcuuga aggacagaca ugacuuugga 180uuuccccagg
aggaguuugg caaccaguuc caaaaggcug aaaccauccc uguccuccau
240gagaugaucc agcagaucuu caaccuuuuc agcacaaagg acucaucugc
ugcuugggau 300gagacccucc uagacaaauu cuacacugaa cucuaccagc
agcugaauga ccuggaagcc 360ugugugauac aggggguggg ggugacagag
acuccccuga ugaaggagga cuccauucug 420gcugugagga aauacuucca
aagaaucacu cucuaucuga aagagaagaa auacagcccu 480ugugccuggg
agguugucag agcagaaauc augagaucuu uuucuuuguc aacaaacuug
540caagaaaguu uaagaaguaa ggaaugauga 57023570RNAArtificial
sequenceHuman optimized IFN-alpha-2b 23auggcccuga cuuuugcccu
ucucguggcu uuguuggugc ugaguugcaa aucuuccugu 60agugucggau gugaucugcc
ucaaacccac agucugggau cuaggagaac acugaugcug 120uuggcacaga
ugaggagaau uagccucuuu uccugccuga aggauagaca ugacuucggc
180uuuccccaag aggaguuugg caaucaguuc cagaaagcgg aaacgauucc
cguucugcac 240gagaugaucc agcagaucuu caaccucuuu ucaaccaaag
acagcucagc agccugggau 300gagacacugc uggacaaauu cuacacagaa
cuguaucagc agcuuaacga ucuggaggca 360ugcgugaucc aagggguugg
ugugacugaa acuccgcuua ugaaggagga cuccauucug 420gcuguacgga
aguacuucca gagaauaacc cucuaucuga aggagaagaa guacucacca
480ugugcuuggg aagucgugag agccgaaauc augagauccu ucagccuuag
caccaaucuc 540caggaaucuc ugagaagcaa agagugauga
57024241PRTArtificial sequenceHuman IL-15 sushi 24Met Ala Pro Arg
Arg Ala Arg Gly Cys Arg Thr Leu Gly Leu Pro Ala1 5 10 15Leu Leu Leu
Leu Leu Leu Leu Arg Pro Pro Ala Thr Arg Gly Ile Thr 20 25 30Cys Pro
Pro Pro Met Ser Val Glu His Ala Asp Ile Trp Val Lys Ser 35 40 45Tyr
Ser Leu Tyr Ser Arg Glu Arg Tyr Ile Cys Asn Ser Gly Phe Lys 50 55
60Arg Lys Ala Gly Thr Ser Ser Leu Thr Glu Cys Val Leu Asn Lys Ala65
70 75 80Thr Asn Val Ala His Trp Thr Thr Pro Ser Leu Lys Cys Ile Arg
Asp 85 90 95Pro Ala Leu Val His Gln Arg Pro Ala Pro Pro Gly Gly Gly
Ser Gly 100 105 110Gly Gly Gly Ser Gly Gly Gly Ser Gly Gly Gly Gly
Ser Leu Gln Asn 115 120 125Trp Val Asn Val Ile Ser Asp Leu Lys Lys
Ile Glu Asp Leu Ile Gln 130 135 140Ser Met His Ile Asp Ala Thr Leu
Tyr Thr Glu Ser Asp Val His Pro145 150 155 160Ser Cys Lys Val Thr
Ala Met Lys Cys Phe Leu Leu Glu Leu Gln Val 165 170 175Ile Ser Leu
Glu Ser Gly Asp Ala Ser Ile His Asp Thr Val Glu Asn 180 185 190Leu
Ile Ile Leu Ala Asn Asn Ser Leu Ser Ser Asn Gly Asn Val Thr 195 200
205Glu Ser Gly Cys Lys Glu Cys Glu Glu Leu Glu Glu Lys Asn Ile Lys
210 215 220Glu Phe Leu Gln Ser Phe Val His Ile Val Gln Met Phe Ile
Asn Thr225 230 235 240Ser25729DNAArtificial sequenceHuman IL-15
sushi 25atggccccgc ggcgggcgcg cggctgccgg accctcggtc tcccggcgct
gctactgctg 60ctgctgctcc ggccgccggc gacgcggggc atcacgtgcc ctccccccat
gtccgtggaa 120cacgcagaca tctgggtcaa gagctacagc ttgtactcca
gggagcggta catttgtaac 180tctggtttca agcgtaaagc cggcacgtcc
agcctgacgg agtgcgtgtt gaacaaggcc 240acgaatgtcg cccactggac
aacccccagt ctcaaatgca ttagagaccc tgccctggtt 300caccaaaggc
cagcgccacc cgggggagga tctggcggcg gtgggtctgg cgggggatct
360ggcggaggag gaagcttaca gaactgggtg aatgtaataa gtgatttgaa
aaaaattgaa 420gatcttattc aatctatgca tattgatgct actttatata
cggaaagtga tgttcacccc 480agttgcaaag taacagcaat gaagtgcttt
ctcttggagt tacaagttat ttcacttgag 540tccggagatg caagtattca
tgatacagta gaaaatctga tcatcctagc aaacaacagt 600ttgtcttcta
atgggaatgt aacagaatct ggatgcaaag aatgtgagga actggaggaa
660aaaaatatta aagaattttt gcagagtttt gtacatattg tccaaatgtt
catcaacact 720tcttgatga 72926729RNAArtificial sequenceHuman IL-15
sushi 26auggccccgc ggcgggcgcg cggcugccgg acccucgguc ucccggcgcu
gcuacugcug 60cugcugcucc ggccgccggc gacgcggggc aucacgugcc cuccccccau
guccguggaa 120cacgcagaca ucugggucaa gagcuacagc uuguacucca
gggagcggua cauuuguaac 180ucugguuuca agcguaaagc cggcacgucc
agccugacgg agugcguguu gaacaaggcc 240acgaaugucg cccacuggac
aacccccagu cucaaaugca uuagagaccc ugcccugguu 300caccaaaggc
cagcgccacc cgggggagga ucuggcggcg gugggucugg cgggggaucu
360ggcggaggag gaagcuuaca gaacugggug aauguaauaa gugauuugaa
aaaaauugaa 420gaucuuauuc aaucuaugca uauugaugcu acuuuauaua
cggaaaguga uguucacccc 480aguugcaaag uaacagcaau gaagugcuuu
cucuuggagu uacaaguuau uucacuugag 540uccggagaug caaguauuca
ugauacagua gaaaaucuga ucauccuagc aaacaacagu 600uugucuucua
augggaaugu aacagaaucu ggaugcaaag aaugugagga acuggaggaa
660aaaaauauua aagaauuuuu gcagaguuuu guacauauug uccaaauguu
caucaacacu 720ucuugauga 72927144PRTHomo sapiens 27Met Trp Leu Gln
Ser Leu Leu Leu Leu Gly Thr Val Ala Cys Ser Ile1 5 10 15Ser Ala Pro
Ala Arg Ser Pro Ser Pro Ser Thr Gln Pro Trp Glu His 20 25 30Val Asn
Ala Ile Gln Glu Ala Arg Arg Leu Leu Asn Leu Ser Arg Asp 35 40 45Thr
Ala Ala Glu Met Asn Glu Thr Val Glu Val Ile Ser Glu Met Phe 50 55
60Asp Leu Gln Glu Pro Thr Cys Leu Gln Thr Arg Leu Glu Leu Tyr Lys65
70 75 80Gln Gly Leu Arg Gly Ser Leu Thr Lys Leu Lys Gly Pro Leu Thr
Met 85 90 95Met Ala Ser His Tyr Lys Gln His Cys Pro Pro Thr Pro Glu
Thr Ser 100 105 110Cys Ala Thr Gln Ile Ile Thr Phe Glu Ser Phe Lys
Glu Asn Leu Lys 115 120 125Asp Phe Leu Leu Val Ile Pro Phe Asp Cys
Trp Glu Pro Val Gln Glu 130 135 14028438DNAHomo sapiens
28atgtggctcc agagcctgct gctcttgggc actgtggcct gctccatctc tgcacccgcc
60cgctcgccca gccccagcac gcagccctgg gagcatgtga atgccatcca ggaggcccgg
120cgtctgctga acctgagtag agacactgct gctgagatga atgaaacagt
agaagtcatc 180tcagaaatgt ttgacctcca ggagccgacc tgcctacaga
cccgcctgga gctgtacaag 240cagggcctgc ggggcagcct caccaagctc
aagggcccct tgaccatgat ggccagccac 300tacaagcagc actgccctcc
aaccccggaa acttcctgtg caacccagat tatcaccttt 360gaaagtttca
aagagaacct gaaggacttt ctgcttgtca tcccctttga ctgctgggag
420ccagtccagg agtgatga 43829438RNAHomo sapiens 29auguggcucc
agagccugcu gcucuugggc acuguggccu gcuccaucuc ugcacccgcc 60cgcucgccca
gccccagcac gcagcccugg gagcauguga augccaucca ggaggcccgg
120cgucugcuga accugaguag agacacugcu gcugagauga augaaacagu
agaagucauc 180ucagaaaugu uugaccucca ggagccgacc ugccuacaga
cccgccugga gcuguacaag 240cagggccugc ggggcagccu caccaagcuc
aagggccccu ugaccaugau ggccagccac 300uacaagcagc acugcccucc
aaccccggaa acuuccugug caacccagau uaucaccuuu 360gaaaguuuca
aagagaaccu gaaggacuuu cugcuuguca uccccuuuga cugcugggag
420ccaguccagg agugauga 43830161PRTArtificial sequenceModA IL-2
(human IL-2 in combination with a mouse optimized secretion
sequence) 30Met Arg Val Thr Ala Pro Arg Thr Leu Ile Leu Leu Leu Ser
Gly Ala1 5 10 15Leu Ala Leu Thr Glu Thr Trp Ala Gly Ser Gly Ser Ala
Pro Thr Ser 20 25 30Ser Ser Thr Lys Lys Thr Gln Leu Gln Leu Glu His
Leu Leu Leu Asp 35 40 45Leu Gln Met Ile Leu Asn Gly Ile Asn Asn Tyr
Lys Asn Pro Lys Leu 50 55 60Thr Arg Met Leu Thr Phe Lys Phe Tyr Met
Pro Lys Lys Ala Thr Glu65 70 75 80Leu Lys His Leu Gln Cys Leu Glu
Glu Glu Leu Lys Pro Leu Glu Glu 85 90 95Val Leu Asn Leu Ala Gln Ser
Lys Asn Phe His Leu Arg Pro Arg Asp 100 105 110Leu Ile Ser Asn Ile
Asn Val Ile Val Leu Glu Leu Lys Gly Ser Glu 115 120 125Thr Thr Phe
Met Cys Glu Tyr Ala Asp Glu Thr Ala Thr Ile Val Glu 130 135 140Phe
Leu Asn Arg Trp Ile Thr Phe Cys Gln Ser Ile Ile Ser Thr Leu145 150
155 160Thr31959DNAArtificial sequenceModA IL-2 (5'UTR-CDS-3'UTR)
31gggcgaacta gtattcttct ggtccccaca gactcagaga gaacccgcca ccatgagagt
60gaccgccccc agaaccctga tcctgctgct gtctggcgcc ctggccctga cagagacatg
120ggccggaagc ggatccgcac ctacttcaag ttctacaaag aaaacacagc
tacaactgga 180gcatttactt ctggatttac agatgatttt gaatggaatt
aataattaca agaatcccaa 240actcaccagg atgctcacat ttaagtttta
catgcccaag aaggccacag aactgaaaca 300tcttcagtgt ctagaagaag
aactcaaacc tctggaggaa gtgctaaatt tagctcaaag 360caaaaacttt
cacttaagac ccagggactt aatcagcaat atcaacgtaa tagttctgga
420actaaaggga tctgaaacaa cattcatgtg tgaatatgct gatgagacag
caaccattgt 480agaatttctg aacagatgga ttaccttttg tcaaagcatc
atctcaacac tgacttgact 540cgagagctcg ctttcttgct gtccaatttc
tattaaaggt tcctttgttc cctaagtcca 600actactaaac tgggggatat
tatgaagggc cttgagcatc tggattctgc ctaataaaaa 660acatttattt
tcattgctgc gtcgagagct cgctttcttg ctgtccaatt tctattaaag
720gttcctttgt tccctaagtc caactactaa actgggggat attatgaagg
gccttgagca 780tctggattct gcctaataaa aaacatttat tttcattgct
gcgtcgagac ctggtccaga 840gtcgctagca aaaaaaaaaa aaaaaaaaaa
aaaaaaaaag catatgacta aaaaaaaaaa 900aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 95932959RNAArtificial
sequenceModA IL-2 32gggcgaacua guauucuucu gguccccaca gacucagaga
gaacccgcca ccaugagagu 60gaccgccccc agaacccuga uccugcugcu gucuggcgcc
cuggcccuga cagagacaug 120ggccggaagc ggauccgcac cuacuucaag
uucuacaaag aaaacacagc uacaacugga 180gcauuuacuu cuggauuuac
agaugauuuu gaauggaauu aauaauuaca agaaucccaa 240acucaccagg
augcucacau uuaaguuuua caugcccaag aaggccacag aacugaaaca
300ucuucagugu cuagaagaag aacucaaacc ucuggaggaa gugcuaaauu
uagcucaaag 360caaaaacuuu cacuuaagac ccagggacuu aaucagcaau
aucaacguaa uaguucugga 420acuaaaggga ucugaaacaa cauucaugug
ugaauaugcu gaugagacag caaccauugu 480agaauuucug aacagaugga
uuaccuuuug ucaaagcauc aucucaacac ugacuugacu 540cgagagcucg
cuuucuugcu guccaauuuc uauuaaaggu uccuuuguuc ccuaagucca
600acuacuaaac ugggggauau uaugaagggc cuugagcauc uggauucugc
cuaauaaaaa 660acauuuauuu ucauugcugc gucgagagcu cgcuuucuug
cuguccaauu ucuauuaaag 720guuccuuugu ucccuaaguc caacuacuaa
acugggggau auuaugaagg gccuugagca 780ucuggauucu gccuaauaaa
aaacauuuau uuucauugcu gcgucgagac cugguccaga 840gucgcuagca
aaaaaaaaaa aaaaaaaaaa aaaaaaaaag cauaugacua aaaaaaaaaa
900aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
95933161PRTArtificial sequenceModB IL-2 33Met Gly Ala Met Ala Pro
Arg Thr Leu Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu Ala Pro Thr Gln
Thr Arg Ala Gly Pro Gly Ser Ala Pro Thr Ser 20 25 30Ser Ser Thr Lys
Lys Thr Gln Leu Gln Leu Glu His Leu Leu Leu Asp 35 40 45Leu Gln Met
Ile Leu Asn Gly Ile Asn Asn Tyr Lys Asn Pro Lys Leu 50 55 60Thr Arg
Met Leu Thr Phe Lys Phe Tyr Met Pro Lys Lys Ala Thr Glu65 70 75
80Leu Lys His Leu Gln Cys Leu Glu Glu Glu Leu Lys Pro Leu Glu Glu
85 90 95Val Leu Asn Leu Ala Gln Ser Lys Asn Phe His Leu Arg Pro Arg
Asp 100 105 110Leu Ile Ser Asn Ile Asn Val Ile Val Leu Glu Leu Lys
Gly Ser Glu 115 120 125Thr Thr Phe Met Cys Glu Tyr Ala Asp Glu Thr
Ala Thr Ile Val Glu 130 135 140Phe Leu Asn Arg Trp Ile Thr Phe Cys
Gln Ser Ile Ile Ser Thr Leu145 150 155 160Thr341039DNAArtificial
sequenceModB IL-2 (5'UTR-CDS-3'UTR) 34ggaataaact agtctcaaca
caacatatac aaaacaaacg aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat
ttaaatcatt tcttttaaag caaaagcaat tttctgaaaa 120ttttcaccat
ttacgaacga tagccatggg cgccatggcc cctagaacat tgctcctgct
180gctggccgct gccctggccc ctacacagac aagagctgga cctggatccg
cacctacttc 240aagttctaca aagaaaacac agctacaact ggagcattta
cttctggatt tacagatgat 300tttgaatgga attaataatt acaagaatcc
caaactcacc aggatgctca catttaagtt 360ttacatgccc aagaaggcca
cagaactgaa acatcttcag tgtctagaag aagaactcaa 420acctctggag
gaagtgctaa atttagctca aagcaaaaac tttcacttaa gacccaggga
480cttaatcagc aatatcaacg taatagttct ggaactaaag ggatctgaaa
caacattcat 540gtgtgaatat gctgatgaga cagcaaccat tgtagaattt
ctgaacagat ggattacctt 600ttgtcaaagc atcatctcaa cactgacttg
actcgacgtc ctggtactgc atgcacgcaa 660tgctagctgc ccctttcccg
tcctgggtac cccgagtctc ccccgacctc gggtcccagg 720tatgctccca
cctccacctg ccccactcac cacctctgct agttccagac acctcccaag
780cacgcagcaa tgcagctcaa aacgcttagc ctagccacac ccccacggga
aacagcagtg 840attaaccttt agcaataaac gaaagtttaa ctaagctata
ctaaccccag ggttggtcaa 900tttcgtgcca gccacaccct cgagctagca
aaaaaaaaaa aaaaaaaaaa aaaaaaaaag 960catatgacta aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1020aaaaaaaaaa
aaaaaaaaa 1039351039RNAArtificial sequenceModB IL-2 35ggaauaaacu
agucucaaca caacauauac aaaacaaacg aaucucaagc aaucaagcau 60ucuacuucua
uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau uuucugaaaa
120uuuucaccau uuacgaacga uagccauggg cgccauggcc ccuagaacau
ugcuccugcu 180gcuggccgcu gcccuggccc cuacacagac aagagcugga
ccuggauccg caccuacuuc 240aaguucuaca aagaaaacac agcuacaacu
ggagcauuua cuucuggauu uacagaugau 300uuugaaugga auuaauaauu
acaagaaucc caaacucacc aggaugcuca cauuuaaguu 360uuacaugccc
aagaaggcca cagaacugaa acaucuucag ugucuagaag aagaacucaa
420accucuggag gaagugcuaa auuuagcuca aagcaaaaac uuucacuuaa
gacccaggga 480cuuaaucagc aauaucaacg uaauaguucu ggaacuaaag
ggaucugaaa caacauucau 540gugugaauau gcugaugaga cagcaaccau
uguagaauuu cugaacagau ggauuaccuu 600uugucaaagc aucaucucaa
cacugacuug acucgacguc cugguacugc augcacgcaa 660ugcuagcugc
cccuuucccg uccuggguac cccgagucuc ccccgaccuc gggucccagg
720uaugcuccca ccuccaccug ccccacucac caccucugcu aguuccagac
accucccaag 780cacgcagcaa ugcagcucaa aacgcuuagc cuagccacac
ccccacggga aacagcagug 840auuaaccuuu agcaauaaac gaaaguuuaa
cuaagcuaua cuaaccccag gguuggucaa 900uuucgugcca gccacacccu
cgagcuagca aaaaaaaaaa aaaaaaaaaa aaaaaaaaag 960cauaugacua
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1020aaaaaaaaaa aaaaaaaaa 103936544PRTArtificial sequenceModA murine
IL-12 36Met Arg Val Thr Ala Pro Arg Thr Leu Ile Leu Leu Leu Ser Gly
Ala1 5 10 15Leu Ala Leu Thr Glu Thr Trp Ala Gly Ser Gly Ser Met Trp
Glu Leu 20 25 30Glu Lys Asp Val Tyr Val Val Glu Val Asp Trp Thr Pro
Asp Ala Pro 35 40 45Gly Glu Thr Val Asn Leu Thr Cys Asp Thr Pro Glu
Glu Asp Asp Ile 50 55 60Thr Trp Thr Ser Asp Gln Arg His Gly Val Ile
Gly Ser Gly Lys Thr65 70 75 80Leu Thr Ile Thr Val Lys Glu Phe Leu
Asp Ala Gly Gln Tyr Thr Cys 85 90 95His Lys Gly Gly Glu Thr Leu Ser
His Ser His Leu Leu Leu His Lys 100 105 110Lys Glu Asn Gly Ile Trp
Ser Thr Glu Ile Leu Lys Asn Phe Lys Asn 115 120 125Lys Thr Phe Leu
Lys Cys Glu Ala Pro Asn Tyr Ser Gly Arg Phe Thr 130 135 140Cys Ser
Trp Leu Val Gln Arg Asn Met Asp Leu Lys Phe Asn Ile Lys145 150 155
160Ser Ser Ser Ser Ser Pro Asp Ser Arg Ala Val Thr Cys Gly Met Ala
165 170 175Ser Leu Ser Ala Glu Lys Val Thr Leu Asp Gln Arg Asp Tyr
Glu Lys 180 185 190Tyr Ser Val Ser Cys Gln Glu Asp Val Thr Cys Pro
Thr Ala Glu Glu 195 200 205Thr Leu Pro Ile Glu Leu Ala Leu Glu Ala
Arg Gln Gln Asn Lys Tyr 210 215 220Glu Asn Tyr Ser Thr Ser Phe Phe
Ile Arg Asp Ile Ile Lys Pro Asp225 230 235 240Pro Pro Lys Asn Leu
Gln Met Lys Pro Leu Lys Asn Ser Gln Val Glu 245 250 255Val Ser Trp
Glu Tyr Pro Asp Ser Trp Ser Thr Pro His Ser Tyr Phe 260 265 270Ser
Leu Lys Phe Phe Val Arg Ile Gln Arg Lys Lys Glu Lys Met Lys 275 280
285Glu Thr Glu Glu Gly Cys Asn Gln Lys Gly Ala Phe Leu Val Glu Lys
290 295 300Thr Ser Thr Glu Val Gln Cys Lys Gly Gly Asn Val Cys Val
Gln Ala305 310 315 320Gln Asp Arg Tyr Tyr Asn Ser Ser Cys Ser Lys
Trp Ala Cys Val Pro 325 330 335Cys Arg Val Arg Ser Val Pro Gly Val
Gly Val Pro Gly Val Gly Arg 340 345 350Val Ile Pro Val Ser Gly Pro
Ala Arg Cys Leu Ser Gln Ser Arg Asn 355 360 365Leu Leu Lys Thr Thr
Asp Asp Met Val Lys Thr Ala Arg Glu Lys Leu 370 375 380Lys His Tyr
Ser Cys Thr Ala Glu Asp Ile Asp His Glu Asp Ile Thr385 390 395
400Arg Asp Gln Thr Ser Thr Leu Lys Thr Cys Leu Pro Leu Glu Leu His
405 410 415Lys Asn Glu Ser Cys Leu Ala Thr Arg Glu Thr Ser Ser Thr
Thr Arg 420 425 430Gly Ser Cys Leu Pro Pro Gln Lys Thr Ser Leu Met
Met Thr Leu Cys 435 440 445Leu Gly Ser Ile Tyr Glu Asp Leu Lys Met
Tyr Gln Thr Glu Phe Gln 450 455 460Ala Ile Asn Ala Ala Leu Gln Asn
His Asn His Gln Gln Ile Ile Leu465 470 475 480Asp Lys Gly Met Leu
Val Ala Ile Asp Glu Leu Met Gln Ser Leu Asn 485 490 495His Asn Gly
Glu Thr Leu Arg Gln Lys Pro Pro Val Gly Glu Ala Asp 500 505 510Pro
Tyr Arg Val Lys Met Lys Leu Cys Ile Leu Leu His Ala Phe Ser 515 520
525Thr Arg Val Val Thr Ile Asn Arg Val Met Gly Tyr Leu Ser Ser Ala
530 535 540372111DNAArtificial sequenceModA murine IL-12
(5'UTR-CDS-3'UTR) 37gggcgaacta gtattcttct ggtccccaca gactcagaga
gaacccgcca ccatgagagt 60gaccgccccc agaaccctga tcctgctgct gtctggcgcc
ctggccctga cagagacatg 120ggccggaagc ggatccatgt gggagctgga
gaaagacgtt tatgttgtag aggtggactg 180gactcccgat gcccctggag
aaacagtgaa cctcacctgt gacacgcctg aagaagatga 240catcacctgg
acctcagacc agagacatgg agtcataggc tctggaaaga ccctgaccat
300cactgtcaaa gagtttctag atgctggcca gtacacctgc cacaaaggag
gcgagactct 360gagccactca catctgctgc tccacaagaa ggaaaatgga
atttggtcca ctgaaatttt 420aaaaaatttc aaaaacaaga ctttcctgaa
gtgtgaagca ccaaattact ccggacggtt 480cacgtgctca tggctggtgc
aaagaaacat ggacttgaag ttcaacatca agagcagtag 540cagttcccct
gactctcggg cagtgacatg tggaatggcg tctctgtctg cagagaaggt
600cacactggac caaagggact atgagaagta ttcagtgtcc tgccaggagg
atgtcacctg 660cccaactgcc gaggagaccc tgcccattga actggcgttg
gaagcacggc agcagaataa 720atatgagaac tacagcacca gcttcttcat
cagggacatc atcaaaccag acccgcccaa 780gaacttgcag atgaagcctt
tgaagaactc acaggtggag gtcagctggg agtaccctga 840ctcctggagc
actccccatt cctacttctc cctcaagttc tttgttcgaa tccagcgcaa
900gaaagaaaag atgaaggaga cagaggaggg gtgtaaccag aaaggtgcgt
tcctcgtaga 960gaagacatct accgaagtcc aatgcaaagg cgggaatgtc
tgcgtgcaag ctcaggatcg 1020ctattacaat tcctcatgca gcaagtgggc
atgtgttccc tgcagagtcc gatcggttcc 1080tggagtaggg gtacctggag
tgggcagggt cataccggtc tctggacctg ccaggtgtct 1140tagccagtcc
cgaaacctgc tgaagaccac agatgacatg gtgaagacgg ccagagaaaa
1200gctgaaacat tattcctgca ctgctgaaga catcgatcat gaagacatca
cacgggacca 1260aaccagcaca ttgaagacct gtttaccact ggaactacac
aagaacgaga gttgcctggc 1320tactagagag acttcttcca caacaagagg
gagctgcctg cccccacaga agacgtcttt 1380gatgatgacc ctgtgccttg
gtagcatcta tgaggacttg aagatgtacc agacagagtt 1440ccaggccatc
aacgcagcac ttcagaatca caaccatcag cagatcattc tagacaaggg
1500catgctggtg gccatcgatg agctgatgca gtctctgaat cataatggcg
agactctgcg 1560ccagaaacct cctgtgggag aagcagaccc ttacagagtg
aaaatgaagc tctgcatcct 1620gcttcacgcc ttcagcaccc gcgtcgtgac
catcaacagg gtgatgggct atctgtccag 1680cgcctaatag ctcgagagct
cgctttcttg ctgtccaatt tctattaaag gttcctttgt 1740tccctaagtc
caactactaa actgggggat attatgaagg gccttgagca tctggattct
1800gcctaataaa aaacatttat tttcattgct gcgtcgagag ctcgctttct
tgctgtccaa 1860tttctattaa aggttccttt gttccctaag tccaactact
aaactggggg atattatgaa 1920gggccttgag catctggatt ctgcctaata
aaaaacattt attttcattg ctgcgtcgag 1980acctggtcca gagtcgctag
caaaaaaaaa aaaaaaaaaa aaaaaaaaaa agcatatgac 2040taaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2100aaaaaaaaaa a 2111382111RNAArtificial sequenceModA murine IL-12
38gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca ccaugagagu
60gaccgccccc agaacccuga uccugcugcu gucuggcgcc cuggcccuga cagagacaug
120ggccggaagc ggauccaugu gggagcugga gaaagacguu uauguuguag
agguggacug 180gacucccgau gccccuggag aaacagugaa ccucaccugu
gacacgccug aagaagauga 240caucaccugg accucagacc agagacaugg
agucauaggc ucuggaaaga cccugaccau 300cacugucaaa gaguuucuag
augcuggcca guacaccugc cacaaaggag gcgagacucu 360gagccacuca
caucugcugc uccacaagaa ggaaaaugga auuuggucca cugaaauuuu
420aaaaaauuuc aaaaacaaga cuuuccugaa gugugaagca ccaaauuacu
ccggacgguu 480cacgugcuca uggcuggugc aaagaaacau ggacuugaag
uucaacauca agagcaguag 540caguuccccu gacucucggg cagugacaug
uggaauggcg ucucugucug cagagaaggu 600cacacuggac caaagggacu
augagaagua uucagugucc ugccaggagg augucaccug 660cccaacugcc
gaggagaccc ugcccauuga acuggcguug gaagcacggc agcagaauaa
720auaugagaac uacagcacca gcuucuucau cagggacauc aucaaaccag
acccgcccaa 780gaacuugcag augaagccuu ugaagaacuc acagguggag
gucagcuggg aguacccuga 840cuccuggagc acuccccauu ccuacuucuc
ccucaaguuc uuuguucgaa uccagcgcaa 900gaaagaaaag augaaggaga
cagaggaggg guguaaccag aaaggugcgu uccucguaga 960gaagacaucu
accgaagucc aaugcaaagg cgggaauguc ugcgugcaag cucaggaucg
1020cuauuacaau uccucaugca gcaagugggc auguguuccc ugcagagucc
gaucgguucc 1080uggaguaggg guaccuggag ugggcagggu cauaccgguc
ucuggaccug ccaggugucu 1140uagccagucc cgaaaccugc ugaagaccac
agaugacaug gugaagacgg ccagagaaaa 1200gcugaaacau uauuccugca
cugcugaaga caucgaucau gaagacauca cacgggacca 1260aaccagcaca
uugaagaccu guuuaccacu ggaacuacac aagaacgaga guugccuggc
1320uacuagagag acuucuucca caacaagagg gagcugccug cccccacaga
agacgucuuu 1380gaugaugacc cugugccuug guagcaucua ugaggacuug
aagauguacc agacagaguu 1440ccaggccauc aacgcagcac uucagaauca
caaccaucag cagaucauuc uagacaaggg 1500caugcuggug gccaucgaug
agcugaugca gucucugaau cauaauggcg agacucugcg 1560ccagaaaccu
ccugugggag aagcagaccc uuacagagug aaaaugaagc ucugcauccu
1620gcuucacgcc uucagcaccc gcgucgugac caucaacagg gugaugggcu
aucuguccag 1680cgccuaauag cucgagagcu cgcuuucuug cuguccaauu
ucuauuaaag guuccuuugu 1740ucccuaaguc caacuacuaa acugggggau
auuaugaagg gccuugagca ucuggauucu 1800gccuaauaaa aaacauuuau
uuucauugcu gcgucgagag cucgcuuucu ugcuguccaa 1860uuucuauuaa
agguuccuuu guucccuaag uccaacuacu aaacuggggg auauuaugaa
1920gggccuugag caucuggauu cugccuaaua aaaaacauuu auuuucauug
cugcgucgag 1980accuggucca gagucgcuag caaaaaaaaa aaaaaaaaaa
aaaaaaaaaa agcauaugac 2040uaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2100aaaaaaaaaa a
211139544PRTArtificial sequenceModB murine IL-12 39Met Gly Ala Met
Ala Pro Arg Thr Leu Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu Ala Pro
Thr Gln Thr Arg Ala Gly Pro Gly Ser Met Trp Glu Leu 20 25 30Glu Lys
Asp Val Tyr Val Val Glu Val Asp Trp Thr Pro Asp Ala Pro 35 40 45Gly
Glu Thr Val Asn Leu Thr Cys Asp Thr Pro Glu Glu Asp Asp Ile 50 55
60Thr Trp Thr Ser Asp Gln Arg His Gly Val Ile Gly Ser Gly Lys Thr65
70 75 80Leu Thr Ile Thr Val Lys Glu Phe Leu Asp Ala Gly Gln Tyr Thr
Cys 85 90 95His Lys Gly Gly Glu Thr Leu Ser His Ser His Leu Leu Leu
His Lys 100 105 110Lys Glu Asn Gly Ile Trp Ser Thr Glu Ile Leu Lys
Asn Phe Lys Asn 115 120 125Lys Thr Phe Leu Lys Cys Glu Ala Pro Asn
Tyr Ser Gly Arg Phe Thr 130 135 140Cys Ser Trp Leu Val Gln Arg Asn
Met Asp Leu Lys Phe Asn Ile Lys145 150 155 160Ser Ser Ser Ser Ser
Pro Asp Ser Arg Ala Val Thr Cys Gly Met Ala 165 170 175Ser Leu Ser
Ala Glu Lys Val Thr Leu Asp Gln Arg Asp Tyr Glu Lys 180 185 190Tyr
Ser Val Ser Cys Gln Glu Asp Val Thr Cys Pro Thr Ala Glu Glu 195 200
205Thr Leu Pro Ile Glu Leu Ala Leu Glu Ala Arg Gln Gln Asn Lys Tyr
210 215 220Glu Asn Tyr Ser Thr Ser Phe Phe Ile Arg Asp Ile Ile Lys
Pro Asp225 230 235 240Pro Pro Lys Asn Leu Gln Met Lys Pro Leu Lys
Asn Ser Gln Val Glu 245 250 255Val Ser Trp Glu Tyr Pro Asp Ser Trp
Ser Thr Pro His Ser Tyr Phe 260 265 270Ser Leu Lys Phe Phe Val Arg
Ile Gln Arg Lys Lys Glu Lys Met Lys 275 280 285Glu Thr Glu Glu Gly
Cys Asn Gln Lys Gly Ala Phe Leu Val Glu Lys 290 295 300Thr Ser Thr
Glu Val Gln Cys Lys Gly Gly Asn Val Cys Val Gln Ala305 310 315
320Gln Asp Arg Tyr Tyr Asn Ser Ser Cys Ser Lys Trp Ala Cys Val Pro
325 330 335Cys Arg Val Arg Ser Val Pro Gly Val Gly Val Pro Gly Val
Gly Arg 340 345 350Val Ile Pro Val Ser Gly Pro Ala Arg Cys Leu Ser
Gln Ser Arg Asn 355 360 365Leu Leu Lys Thr Thr Asp Asp Met Val Lys
Thr Ala Arg Glu Lys Leu 370 375 380Lys His Tyr Ser Cys Thr Ala Glu
Asp Ile Asp His Glu Asp Ile Thr385 390 395 400Arg Asp Gln Thr Ser
Thr Leu Lys Thr Cys Leu Pro Leu Glu Leu His 405 410 415Lys Asn Glu
Ser Cys Leu Ala Thr Arg Glu Thr Ser Ser Thr Thr Arg 420 425 430Gly
Ser Cys Leu Pro Pro Gln Lys Thr Ser Leu Met Met Thr Leu Cys 435 440
445Leu Gly Ser Ile Tyr Glu Asp Leu Lys Met Tyr Gln Thr Glu Phe Gln
450 455 460Ala Ile Asn Ala Ala Leu Gln Asn His Asn His Gln Gln Ile
Ile Leu465 470 475 480Asp Lys Gly Met Leu Val Ala Ile Asp Glu Leu
Met Gln Ser Leu Asn 485 490 495His Asn Gly Glu Thr Leu Arg Gln Lys
Pro Pro Val Gly Glu Ala Asp 500 505 510Pro Tyr Arg Val Lys Met Lys
Leu Cys Ile Leu Leu His Ala Phe Ser 515 520 525Thr Arg Val Val Thr
Ile Asn Arg Val Met Gly Tyr Leu Ser Ser Ala 530 535
540402191DNAArtificial sequenceModB murine IL-12 (5'UTR-CDS-3'UTR)
40ggaataaact agtctcaaca caacatatac aaaacaaacg aatctcaagc aatcaagcat
60tctacttcta ttgcagcaat ttaaatcatt tcttttaaag caaaagcaat tttctgaaaa
120ttttcaccat ttacgaacga tagccatggg cgccatggcc cctagaacat
tgctcctgct 180gctggccgct gccctggccc ctacacagac aagagctgga
cctggatcca tgtgggagct 240ggagaaagac gtttatgttg tagaggtgga
ctggactccc gatgcccctg gagaaacagt 300gaacctcacc tgtgacacgc
ctgaagaaga tgacatcacc tggacctcag accagagaca 360tggagtcata
ggctctggaa agaccctgac catcactgtc aaagagtttc tagatgctgg
420ccagtacacc tgccacaaag gaggcgagac tctgagccac tcacatctgc
tgctccacaa 480gaaggaaaat ggaatttggt ccactgaaat tttaaaaaat
ttcaaaaaca agactttcct 540gaagtgtgaa gcaccaaatt actccggacg
gttcacgtgc tcatggctgg tgcaaagaaa 600catggacttg aagttcaaca
tcaagagcag tagcagttcc cctgactctc gggcagtgac 660atgtggaatg
gcgtctctgt ctgcagagaa ggtcacactg gaccaaaggg actatgagaa
720gtattcagtg tcctgccagg aggatgtcac ctgcccaact gccgaggaga
ccctgcccat 780tgaactggcg ttggaagcac ggcagcagaa taaatatgag
aactacagca ccagcttctt 840catcagggac atcatcaaac cagacccgcc
caagaacttg cagatgaagc ctttgaagaa 900ctcacaggtg gaggtcagct
gggagtaccc tgactcctgg agcactcccc attcctactt 960ctccctcaag
ttctttgttc gaatccagcg caagaaagaa aagatgaagg agacagagga
1020ggggtgtaac cagaaaggtg cgttcctcgt agagaagaca tctaccgaag
tccaatgcaa 1080aggcgggaat gtctgcgtgc aagctcagga tcgctattac
aattcctcat gcagcaagtg 1140ggcatgtgtt ccctgcagag tccgatcggt
tcctggagta ggggtacctg gagtgggcag 1200ggtcataccg gtctctggac
ctgccaggtg tcttagccag tcccgaaacc tgctgaagac 1260cacagatgac
atggtgaaga cggccagaga aaagctgaaa cattattcct gcactgctga
1320agacatcgat catgaagaca tcacacggga ccaaaccagc acattgaaga
cctgtttacc 1380actggaacta cacaagaacg agagttgcct ggctactaga
gagacttctt ccacaacaag 1440agggagctgc ctgcccccac agaagacgtc
tttgatgatg accctgtgcc ttggtagcat 1500ctatgaggac ttgaagatgt
accagacaga gttccaggcc atcaacgcag cacttcagaa 1560tcacaaccat
cagcagatca ttctagacaa gggcatgctg gtggccatcg atgagctgat
1620gcagtctctg aatcataatg gcgagactct gcgccagaaa cctcctgtgg
gagaagcaga 1680cccttacaga gtgaaaatga agctctgcat cctgcttcac
gccttcagca cccgcgtcgt 1740gaccatcaac agggtgatgg gctatctgtc
cagcgcctaa tagctcgacg tcctggtact 1800gcatgcacgc aatgctagct
gcccctttcc cgtcctgggt accccgagtc tcccccgacc 1860tcgggtccca
ggtatgctcc cacctccacc tgccccactc accacctctg ctagttccag
1920acacctccca agcacgcagc aatgcagctc aaaacgctta gcctagccac
acccccacgg 1980gaaacagcag tgattaacct ttagcaataa acgaaagttt
aactaagcta tactaacccc 2040agggttggtc aatttcgtgc cagccacacc
ctcgagctag caaaaaaaaa aaaaaaaaaa 2100aaaaaaaaaa agcatatgac
taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2160aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa a 2191412191RNAArtificial sequenceModB murine
IL-12 41ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc
aaucaagcau 60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau
uuucugaaaa 120uuuucaccau uuacgaacga uagccauggg cgccauggcc
ccuagaacau ugcuccugcu 180gcuggccgcu gcccuggccc cuacacagac
aagagcugga ccuggaucca ugugggagcu 240ggagaaagac guuuauguug
uagaggugga cuggacuccc gaugccccug gagaaacagu 300gaaccucacc
ugugacacgc cugaagaaga ugacaucacc uggaccucag accagagaca
360uggagucaua ggcucuggaa agacccugac caucacuguc aaagaguuuc
uagaugcugg 420ccaguacacc ugccacaaag gaggcgagac ucugagccac
ucacaucugc ugcuccacaa 480gaaggaaaau ggaauuuggu ccacugaaau
uuuaaaaaau uucaaaaaca agacuuuccu 540gaagugugaa gcaccaaauu
acuccggacg guucacgugc ucauggcugg ugcaaagaaa 600cauggacuug
aaguucaaca ucaagagcag uagcaguucc ccugacucuc gggcagugac
660auguggaaug gcgucucugu cugcagagaa ggucacacug gaccaaaggg
acuaugagaa 720guauucagug uccugccagg aggaugucac cugcccaacu
gccgaggaga cccugcccau 780ugaacuggcg uuggaagcac ggcagcagaa
uaaauaugag aacuacagca ccagcuucuu 840caucagggac aucaucaaac
cagacccgcc caagaacuug cagaugaagc cuuugaagaa 900cucacaggug
gaggucagcu gggaguaccc ugacuccugg agcacucccc auuccuacuu
960cucccucaag uucuuuguuc gaauccagcg caagaaagaa aagaugaagg
agacagagga 1020gggguguaac cagaaaggug cguuccucgu agagaagaca
ucuaccgaag uccaaugcaa 1080aggcgggaau gucugcgugc aagcucagga
ucgcuauuac aauuccucau gcagcaagug 1140ggcauguguu cccugcagag
uccgaucggu uccuggagua gggguaccug gagugggcag 1200ggucauaccg
gucucuggac cugccaggug ucuuagccag ucccgaaacc ugcugaagac
1260cacagaugac auggugaaga cggccagaga aaagcugaaa cauuauuccu
gcacugcuga 1320agacaucgau caugaagaca ucacacggga ccaaaccagc
acauugaaga ccuguuuacc 1380acuggaacua cacaagaacg agaguugccu
ggcuacuaga gagacuucuu ccacaacaag 1440agggagcugc cugcccccac
agaagacguc uuugaugaug acccugugcc uugguagcau 1500cuaugaggac
uugaagaugu accagacaga guuccaggcc aucaacgcag cacuucagaa
1560ucacaaccau cagcagauca
uucuagacaa gggcaugcug guggccaucg augagcugau 1620gcagucucug
aaucauaaug gcgagacucu gcgccagaaa ccuccugugg gagaagcaga
1680cccuuacaga gugaaaauga agcucugcau ccugcuucac gccuucagca
cccgcgucgu 1740gaccaucaac agggugaugg gcuaucuguc cagcgccuaa
uagcucgacg uccugguacu 1800gcaugcacgc aaugcuagcu gccccuuucc
cguccugggu accccgaguc ucccccgacc 1860ucggguccca gguaugcucc
caccuccacc ugccccacuc accaccucug cuaguuccag 1920acaccuccca
agcacgcagc aaugcagcuc aaaacgcuua gccuagccac acccccacgg
1980gaaacagcag ugauuaaccu uuagcaauaa acgaaaguuu aacuaagcua
uacuaacccc 2040aggguugguc aauuucgugc cagccacacc cucgagcuag
caaaaaaaaa aaaaaaaaaa 2100aaaaaaaaaa agcauaugac uaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2160aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa a 219142190PRTArtificial sequenceModA murine IFN-alpha-4
42Met Arg Val Thr Ala Pro Arg Thr Leu Ile Leu Leu Leu Ser Gly Ala1
5 10 15Leu Ala Leu Thr Glu Thr Trp Ala Gly Ser Gly Ser Cys Asp Leu
Pro 20 25 30His Thr Tyr Asn Leu Gly Asn Lys Arg Ala Leu Thr Val Leu
Glu Glu 35 40 45Met Arg Arg Leu Pro Pro Leu Ser Cys Leu Lys Asp Arg
Lys Asp Phe 50 55 60Gly Phe Pro Leu Glu Lys Val Asp Asn Gln Gln Ile
Gln Lys Ala Gln65 70 75 80Ala Ile Leu Val Leu Arg Asp Leu Thr Gln
Gln Ile Leu Asn Leu Phe 85 90 95Thr Ser Lys Asp Leu Ser Ala Thr Trp
Asn Ala Thr Leu Leu Asp Ser 100 105 110Phe Cys Asn Asp Leu His Gln
Gln Leu Asn Asp Leu Lys Ala Cys Val 115 120 125Met Gln Glu Pro Pro
Leu Thr Gln Glu Asp Ser Leu Leu Ala Val Arg 130 135 140Thr Tyr Phe
His Arg Ile Thr Val Tyr Leu Arg Lys Lys Lys His Ser145 150 155
160Leu Cys Ala Trp Glu Val Ile Arg Ala Glu Val Trp Arg Ala Leu Ser
165 170 175Ser Ser Thr Asn Leu Leu Ala Arg Leu Ser Glu Glu Lys Glu
180 185 190431049DNAArtificial sequenceModA murine IFN-alpha-4
(5'UTR-CDS-3'UTR) 43gggcgaacta gtattcttct ggtccccaca gactcagaga
gaacccgcca ccatgagagt 60gaccgccccc agaaccctga tcctgctgct gtctggcgcc
ctggccctga cagagacatg 120ggccggaagc ggatcctgtg acctgcctca
cacttataac ctcgggaaca agagggcctt 180gacagtcctg gaagaaatga
gaagactccc ccctctttcc tgcctgaagg acaggaagga 240ttttggattc
cccttggaga aggtggataa ccaacagatc cagaaggctc aagccatcct
300tgtgctaaga gatcttaccc agcagatttt gaacctcttc acatcaaaag
acttgtctgc 360tacttggaat gcaactctcc tagactcatt ctgcaatgac
ctccatcagc agctcaatga 420tctcaaagcc tgtgtgatgc aggaacctcc
tctgacccag gaagactccc tgctggctgt 480gaggacatac ttccacagga
tcactgtgta cctgagaaag aagaaacaca gcctctgtgc 540ctgggaggtg
atcagagcag aagtctggag agccctctct tcctcaacca acttgctggc
600aagactgagt gaggagaagg agtgataact cgagagctcg ctttcttgct
gtccaatttc 660tattaaaggt tcctttgttc cctaagtcca actactaaac
tgggggatat tatgaagggc 720cttgagcatc tggattctgc ctaataaaaa
acatttattt tcattgctgc gtcgagagct 780cgctttcttg ctgtccaatt
tctattaaag gttcctttgt tccctaagtc caactactaa 840actgggggat
attatgaagg gccttgagca tctggattct gcctaataaa aaacatttat
900tttcattgct gcgtcgagac ctggtccaga gtcgctagca aaaaaaaaaa
aaaaaaaaaa 960aaaaaaaaag catatgacta aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1020aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
1049441049RNAArtificial sequenceModA murine IFN-alpha-4
44gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca ccaugagagu
60gaccgccccc agaacccuga uccugcugcu gucuggcgcc cuggcccuga cagagacaug
120ggccggaagc ggauccugug accugccuca cacuuauaac cucgggaaca
agagggccuu 180gacaguccug gaagaaauga gaagacuccc cccucuuucc
ugccugaagg acaggaagga 240uuuuggauuc cccuuggaga agguggauaa
ccaacagauc cagaaggcuc aagccauccu 300ugugcuaaga gaucuuaccc
agcagauuuu gaaccucuuc acaucaaaag acuugucugc 360uacuuggaau
gcaacucucc uagacucauu cugcaaugac cuccaucagc agcucaauga
420ucucaaagcc ugugugaugc aggaaccucc ucugacccag gaagacuccc
ugcuggcugu 480gaggacauac uuccacagga ucacugugua ccugagaaag
aagaaacaca gccucugugc 540cugggaggug aucagagcag aagucuggag
agcccucucu uccucaacca acuugcuggc 600aagacugagu gaggagaagg
agugauaacu cgagagcucg cuuucuugcu guccaauuuc 660uauuaaaggu
uccuuuguuc ccuaagucca acuacuaaac ugggggauau uaugaagggc
720cuugagcauc uggauucugc cuaauaaaaa acauuuauuu ucauugcugc
gucgagagcu 780cgcuuucuug cuguccaauu ucuauuaaag guuccuuugu
ucccuaaguc caacuacuaa 840acugggggau auuaugaagg gccuugagca
ucuggauucu gccuaauaaa aaacauuuau 900uuucauugcu gcgucgagac
cugguccaga gucgcuagca aaaaaaaaaa aaaaaaaaaa 960aaaaaaaaag
cauaugacua aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1020aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 104945190PRTArtificial
sequenceModB murine IFN-alpha-4 45Met Gly Ala Met Ala Pro Arg Thr
Leu Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu Ala Pro Thr Gln Thr Arg
Ala Gly Pro Gly Ser Cys Asp Leu Pro 20 25 30His Thr Tyr Asn Leu Gly
Asn Lys Arg Ala Leu Thr Val Leu Glu Glu 35 40 45Met Arg Arg Leu Pro
Pro Leu Ser Cys Leu Lys Asp Arg Lys Asp Phe 50 55 60Gly Phe Pro Leu
Glu Lys Val Asp Asn Gln Gln Ile Gln Lys Ala Gln65 70 75 80Ala Ile
Leu Val Leu Arg Asp Leu Thr Gln Gln Ile Leu Asn Leu Phe 85 90 95Thr
Ser Lys Asp Leu Ser Ala Thr Trp Asn Ala Thr Leu Leu Asp Ser 100 105
110Phe Cys Asn Asp Leu His Gln Gln Leu Asn Asp Leu Lys Ala Cys Val
115 120 125Met Gln Glu Pro Pro Leu Thr Gln Glu Asp Ser Leu Leu Ala
Val Arg 130 135 140Thr Tyr Phe His Arg Ile Thr Val Tyr Leu Arg Lys
Lys Lys His Ser145 150 155 160Leu Cys Ala Trp Glu Val Ile Arg Ala
Glu Val Trp Arg Ala Leu Ser 165 170 175Ser Ser Thr Asn Leu Leu Ala
Arg Leu Ser Glu Glu Lys Glu 180 185 190461129DNAArtificial
sequenceModB murine IFN-alpha-4 (5'UTR-CDS-3'UTR) 46ggaataaact
agtctcaaca caacatatac aaaacaaacg aatctcaagc aatcaagcat 60tctacttcta
ttgcagcaat ttaaatcatt tcttttaaag caaaagcaat tttctgaaaa
120ttttcaccat ttacgaacga tagccatggg cgccatggcc cctagaacat
tgctcctgct 180gctggccgct gccctggccc ctacacagac aagagctgga
cctggatcct gtgacctgcc 240tcacacttat aacctcggga acaagagggc
cttgacagtc ctggaagaaa tgagaagact 300cccccctctt tcctgcctga
aggacaggaa ggattttgga ttccccttgg agaaggtgga 360taaccaacag
atccagaagg ctcaagccat ccttgtgcta agagatctta cccagcagat
420tttgaacctc ttcacatcaa aagacttgtc tgctacttgg aatgcaactc
tcctagactc 480attctgcaat gacctccatc agcagctcaa tgatctcaaa
gcctgtgtga tgcaggaacc 540tcctctgacc caggaagact ccctgctggc
tgtgaggaca tacttccaca ggatcactgt 600gtacctgaga aagaagaaac
acagcctctg tgcctgggag gtgatcagag cagaagtctg 660gagagccctc
tcttcctcaa ccaacttgct ggcaagactg agtgaggaga aggagtgata
720actcgacgtc ctggtactgc atgcacgcaa tgctagctgc ccctttcccg
tcctgggtac 780cccgagtctc ccccgacctc gggtcccagg tatgctccca
cctccacctg ccccactcac 840cacctctgct agttccagac acctcccaag
cacgcagcaa tgcagctcaa aacgcttagc 900ctagccacac ccccacggga
aacagcagtg attaaccttt agcaataaac gaaagtttaa 960ctaagctata
ctaaccccag ggttggtcaa tttcgtgcca gccacaccct cgagctagca
1020aaaaaaaaaa aaaaaaaaaa aaaaaaaaag catatgacta aaaaaaaaaa
aaaaaaaaaa 1080aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaa 1129471129RNAArtificial sequenceModB murine IFN-alpha-4
47ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc aaucaagcau
60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau uuucugaaaa
120uuuucaccau uuacgaacga uagccauggg cgccauggcc ccuagaacau
ugcuccugcu 180gcuggccgcu gcccuggccc cuacacagac aagagcugga
ccuggauccu gugaccugcc 240ucacacuuau aaccucggga acaagagggc
cuugacaguc cuggaagaaa ugagaagacu 300ccccccucuu uccugccuga
aggacaggaa ggauuuugga uuccccuugg agaaggugga 360uaaccaacag
auccagaagg cucaagccau ccuugugcua agagaucuua cccagcagau
420uuugaaccuc uucacaucaa aagacuuguc ugcuacuugg aaugcaacuc
uccuagacuc 480auucugcaau gaccuccauc agcagcucaa ugaucucaaa
gccuguguga ugcaggaacc 540uccucugacc caggaagacu cccugcuggc
ugugaggaca uacuuccaca ggaucacugu 600guaccugaga aagaagaaac
acagccucug ugccugggag gugaucagag cagaagucug 660gagagcccuc
ucuuccucaa ccaacuugcu ggcaagacug agugaggaga aggagugaua
720acucgacguc cugguacugc augcacgcaa ugcuagcugc cccuuucccg
uccuggguac 780cccgagucuc ccccgaccuc gggucccagg uaugcuccca
ccuccaccug ccccacucac 840caccucugcu aguuccagac accucccaag
cacgcagcaa ugcagcucaa aacgcuuagc 900cuagccacac ccccacggga
aacagcagug auuaaccuuu agcaauaaac gaaaguuuaa 960cuaagcuaua
cuaaccccag gguuggucaa uuucgugcca gccacacccu cgagcuagca
1020aaaaaaaaaa aaaaaaaaaa aaaaaaaaag cauaugacua aaaaaaaaaa
aaaaaaaaaa 1080aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaa 112948232PRTArtificial sequenceModA murine IL-15 sushi
48Met Gly Ala Met Ala Pro Arg Thr Leu Leu Leu Leu Leu Ala Ala Ala1
5 10 15Leu Ala Pro Thr Gln Thr Arg Ala Gly Pro Gly Ser Thr Thr Cys
Pro 20 25 30Pro Pro Val Ser Ile Glu His Ala Asp Ile Arg Val Lys Asn
Tyr Ser 35 40 45Val Asn Ser Arg Glu Arg Tyr Val Cys Asn Ser Gly Phe
Lys Arg Lys 50 55 60Ala Gly Thr Ser Thr Leu Ile Glu Cys Val Ile Asn
Lys Asn Thr Asn65 70 75 80Val Ala His Trp Thr Thr Pro Ser Leu Lys
Cys Ile Arg Asp Pro Ser 85 90 95Leu Ala Gly Gly Ser Gly Gly Ser Gly
Gly Ser Gly Gly Ser Gly Gly 100 105 110Ser Gly Gly Ser Gly Gly Asn
Trp Ile Asp Val Arg Tyr Asp Leu Glu 115 120 125Lys Ile Glu Ser Leu
Ile Gln Ser Ile His Ile Asp Thr Thr Leu Tyr 130 135 140Thr Asp Ser
Asp Phe His Pro Ser Cys Lys Val Thr Ala Met Asn Cys145 150 155
160Phe Leu Leu Glu Leu Gln Val Ile Leu His Glu Tyr Ser Asn Met Thr
165 170 175Leu Asn Glu Thr Val Arg Asn Val Leu Tyr Leu Ala Asn Ser
Thr Leu 180 185 190Ser Ser Asn Lys Asn Val Ala Glu Ser Gly Cys Lys
Glu Cys Glu Glu 195 200 205Leu Glu Glu Lys Thr Phe Thr Glu Phe Leu
Gln Ser Phe Ile Arg Ile 210 215 220Val Gln Met Phe Ile Asn Thr
Ser225 230491162DNAArtificial sequenceModA murine IL-15 sushi
(5'UTR-CDS-3'UTR) 49gggcgaacta gtattcttct ggtccccaca gactcagaga
gaacccgcca ccatgggcgc 60catggcccct agaacattgc tcctgctgct ggccgctgcc
ctggccccta cacagacaag 120agctggacct ggatccacca cgtgtccacc
tcccgtatct attgagcatg ctgacatccg 180ggtcaagaat tacagtgtga
actccaggga gaggtatgtc tgtaactctg gctttaagcg 240gaaagctgga
acatccaccc tgattgagtg tgtgatcaac aagaacacaa atgttgccca
300ctggacaact cccagcctca agtgcatcag agacccctcc ctagctggag
ggagcggagg 360ctctggcgga agcggcgggt ctggaggctc cgggggaagc
ggcggaaatt ggatcgacgt 420gcgctacgac ctggaaaaga tcgagagcct
gatccagagc atccacatcg acaccaccct 480gtacaccgac agcgacttcc
accccagctg caaagtgacc gctatgaact gcttcctgct 540ggaactgcaa
gtgatcctgc acgagtacag caacatgacc ctgaacgaga cagtgcggaa
600cgtgctgtac ctggccaaca gcaccctgag cagcaacaag aacgtggccg
agagcggctg 660caaagagtgc gaggaactgg aagaaaagac cttcaccgag
tttctgcaga gcttcatcag 720gatcgtgcag atgttcatca acacctcttg
atgagtcgac gtcctggtac tgcatgcacg 780caatgctagc tgcccctttc
ccgtcctggg taccccgagt ctcccccgac ctcgggtccc 840aggtatgctc
ccacctccac ctgccccact caccacctct gctagttcca gacacctccc
900aagcacgcag caatgcagct caaaacgctt agcctagcca cacccccacg
ggaaacagca 960gtgattaacc tttagcaata aacgaaagtt taactaagct
atactaaccc cagggttggt 1020caatttcgtg ccagccacac cctcgagcta
gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1080aagcatatga ctaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1140aaaaaaaaaa
aaaaaaaaaa aa 1162501162RNAArtificial sequenceModA murine IL-15
sushi 50gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca
ccaugggcgc 60cauggccccu agaacauugc uccugcugcu ggccgcugcc cuggccccua
cacagacaag 120agcuggaccu ggauccacca cguguccacc ucccguaucu
auugagcaug cugacauccg 180ggucaagaau uacaguguga acuccaggga
gagguauguc uguaacucug gcuuuaagcg 240gaaagcugga acauccaccc
ugauugagug ugugaucaac aagaacacaa auguugccca 300cuggacaacu
cccagccuca agugcaucag agaccccucc cuagcuggag ggagcggagg
360cucuggcgga agcggcgggu cuggaggcuc cgggggaagc ggcggaaauu
ggaucgacgu 420gcgcuacgac cuggaaaaga ucgagagccu gauccagagc
auccacaucg acaccacccu 480guacaccgac agcgacuucc accccagcug
caaagugacc gcuaugaacu gcuuccugcu 540ggaacugcaa gugauccugc
acgaguacag caacaugacc cugaacgaga cagugcggaa 600cgugcuguac
cuggccaaca gcacccugag cagcaacaag aacguggccg agagcggcug
660caaagagugc gaggaacugg aagaaaagac cuucaccgag uuucugcaga
gcuucaucag 720gaucgugcag auguucauca acaccucuug augagucgac
guccugguac ugcaugcacg 780caaugcuagc ugccccuuuc ccguccuggg
uaccccgagu cucccccgac cucggguccc 840agguaugcuc ccaccuccac
cugccccacu caccaccucu gcuaguucca gacaccuccc 900aagcacgcag
caaugcagcu caaaacgcuu agccuagcca cacccccacg ggaaacagca
960gugauuaacc uuuagcaaua aacgaaaguu uaacuaagcu auacuaaccc
caggguuggu 1020caauuucgug ccagccacac ccucgagcua gcaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1080aagcauauga cuaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1140aaaaaaaaaa aaaaaaaaaa aa
116251232PRTArtificial sequenceModB murine IL-15 sushi 51Met Gly
Ala Met Ala Pro Arg Thr Leu Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu
Ala Pro Thr Gln Thr Arg Ala Gly Pro Gly Ser Thr Thr Cys Pro 20 25
30Pro Pro Val Ser Ile Glu His Ala Asp Ile Arg Val Lys Asn Tyr Ser
35 40 45Val Asn Ser Arg Glu Arg Tyr Val Cys Asn Ser Gly Phe Lys Arg
Lys 50 55 60Ala Gly Thr Ser Thr Leu Ile Glu Cys Val Ile Asn Lys Asn
Thr Asn65 70 75 80Val Ala His Trp Thr Thr Pro Ser Leu Lys Cys Ile
Arg Asp Pro Ser 85 90 95Leu Ala Gly Gly Ser Gly Gly Ser Gly Gly Ser
Gly Gly Ser Gly Gly 100 105 110Ser Gly Gly Ser Gly Gly Asn Trp Ile
Asp Val Arg Tyr Asp Leu Glu 115 120 125Lys Ile Glu Ser Leu Ile Gln
Ser Ile His Ile Asp Thr Thr Leu Tyr 130 135 140Thr Asp Ser Asp Phe
His Pro Ser Cys Lys Val Thr Ala Met Asn Cys145 150 155 160Phe Leu
Leu Glu Leu Gln Val Ile Leu His Glu Tyr Ser Asn Met Thr 165 170
175Leu Asn Glu Thr Val Arg Asn Val Leu Tyr Leu Ala Asn Ser Thr Leu
180 185 190Ser Ser Asn Lys Asn Val Ala Glu Ser Gly Cys Lys Glu Cys
Glu Glu 195 200 205Leu Glu Glu Lys Thr Phe Thr Glu Phe Leu Gln Ser
Phe Ile Arg Ile 210 215 220Val Gln Met Phe Ile Asn Thr Ser225
230521255DNAArtificial sequenceModB murine IL-15 sushi
(5'UTR-CDS-3'UTR) 52ggaataaact agtctcaaca caacatatac aaaacaaacg
aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat ttaaatcatt tcttttaaag
caaaagcaat tttctgaaaa 120ttttcaccat ttacgaacga tagccatggg
cgccatggcc cctagaacat tgctcctgct 180gctggccgct gccctggccc
ctacacagac aagagctgga cctggatcca ccacgtgtcc 240acctcccgta
tctattgagc atgctgacat ccgggtcaag aattacagtg tgaactccag
300ggagaggtat gtctgtaact ctggctttaa gcggaaagct ggaacatcca
ccctgattga 360gtgtgtgatc aacaagaaca caaatgttgc ccactggaca
actcccagcc tcaagtgcat 420cagagacccc tccctagctg gagggagcgg
aggctctggc ggaagcggcg ggtctggagg 480ctccggggga agcggcggaa
attggatcga cgtgcgctac gacctggaaa agatcgagag 540cctgatccag
agcatccaca tcgacaccac cctgtacacc gacagcgact tccaccccag
600ctgcaaagtg accgctatga actgcttcct gctggaactg caagtgatcc
tgcacgagta 660cagcaacatg accctgaacg agacagtgcg gaacgtgctg
tacctggcca acagcaccct 720gagcagcaac aagaacgtgg ccgagagcgg
ctgcaaagag tgcgaggaac tggaagaaaa 780gaccttcacc gagtttctgc
agagcttcat caggatcgtg cagatgttca tcaacacctc 840ttgatgagtc
gacgtcctgg tactgcatgc acgcaatgct agctgcccct ttcccgtcct
900gggtaccccg agtctccccc gacctcgggt cccaggtatg ctcccacctc
cacctgcccc 960actcaccacc tctgctagtt ccagacacct cccaagcacg
cagcaatgca gctcaaaacg 1020cttagcctag ccacaccccc acgggaaaca
gcagtgatta acctttagca ataaacgaaa 1080gtttaactaa gctatactaa
ccccagggtt ggtcaatttc gtgccagcca caccctcgag 1140ctagcaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaagcata tgactaaaaa aaaaaaaaaa
1200aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
1255531255RNAArtificial sequenceModB murine IL-15 sushi
53ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc aaucaagcau
60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau uuucugaaaa
120uuuucaccau uuacgaacga uagccauggg cgccauggcc ccuagaacau
ugcuccugcu 180gcuggccgcu gcccuggccc cuacacagac aagagcugga
ccuggaucca ccacgugucc 240accucccgua ucuauugagc augcugacau
ccgggucaag aauuacagug ugaacuccag 300ggagagguau gucuguaacu
cuggcuuuaa gcggaaagcu ggaacaucca cccugauuga 360gugugugauc
aacaagaaca caaauguugc ccacuggaca acucccagcc ucaagugcau
420cagagacccc ucccuagcug gagggagcgg aggcucuggc ggaagcggcg
ggucuggagg 480cuccggggga agcggcggaa auuggaucga cgugcgcuac
gaccuggaaa agaucgagag 540ccugauccag
agcauccaca ucgacaccac ccuguacacc gacagcgacu uccaccccag
600cugcaaagug accgcuauga acugcuuccu gcuggaacug caagugaucc
ugcacgagua 660cagcaacaug acccugaacg agacagugcg gaacgugcug
uaccuggcca acagcacccu 720gagcagcaac aagaacgugg ccgagagcgg
cugcaaagag ugcgaggaac uggaagaaaa 780gaccuucacc gaguuucugc
agagcuucau caggaucgug cagauguuca ucaacaccuc 840uugaugaguc
gacguccugg uacugcaugc acgcaaugcu agcugccccu uucccguccu
900ggguaccccg agucuccccc gaccucgggu cccagguaug cucccaccuc
caccugcccc 960acucaccacc ucugcuaguu ccagacaccu cccaagcacg
cagcaaugca gcucaaaacg 1020cuuagccuag ccacaccccc acgggaaaca
gcagugauua accuuuagca auaaacgaaa 1080guuuaacuaa gcuauacuaa
ccccaggguu ggucaauuuc gugccagcca cacccucgag 1140cuagcaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaagcaua ugacuaaaaa aaaaaaaaaa
1200aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
125554141PRTArtificial sequenceModA murine GM-CSF 54Met Trp Leu Gln
Asn Leu Leu Phe Leu Gly Ile Val Val Tyr Ser Leu1 5 10 15Ser Ala Pro
Thr Arg Ser Pro Ile Thr Val Thr Arg Pro Trp Lys His 20 25 30Val Glu
Ala Ile Lys Glu Ala Leu Asn Leu Leu Asp Asp Met Pro Val 35 40 45Thr
Leu Asn Glu Glu Val Glu Val Val Ser Asn Glu Phe Ser Phe Lys 50 55
60Lys Leu Thr Cys Val Gln Thr Arg Leu Lys Ile Phe Glu Gln Gly Leu65
70 75 80Arg Gly Asn Phe Thr Lys Leu Lys Gly Ala Leu Asn Met Thr Ala
Ser 85 90 95Tyr Tyr Gln Thr Tyr Cys Pro Pro Thr Pro Glu Thr Asp Cys
Glu Thr 100 105 110Gln Val Thr Thr Tyr Ala Asp Phe Ile Asp Ser Leu
Lys Thr Phe Leu 115 120 125Thr Asp Ile Pro Phe Glu Cys Lys Lys Pro
Gly Gln Lys 130 135 14055908DNAArtificial sequenceModA murine
GM-CSF (5'UTR-CDS-3'UTR) 55gggcgaacta gtattcttct ggtccccaca
gactcagaga gaacccgcca ccatgtggct 60gcagaacctg ctgttcctgg gcatcgtggt
gtacagcctg agcgccccca ccaggagccc 120catcaccgtg accaggccct
ggaagcacgt ggaggccatc aaggaggccc tgaacctgct 180ggacgacatg
cccgtgaccc tgaacgagga ggtggaggtg gtgagcaacg agttcagctt
240caagaagctg acctgcgtgc agaccaggct gaagatcttc gagcagggcc
tgaggggcaa 300cttcaccaag ctgaagggcg ccctgaacat gaccgccagc
tactaccaga cctactgccc 360ccccaccccc gagaccgact gcgagaccca
ggtgaccacc tacgccgact tcatcgacag 420cctgaagacc ttcctgaccg
acatcccctt cgagtgcaag aagcccggcc agaagtgatg 480actcgagctg
gtactgcatg cacgcaatgc tagctgcccc tttcccgtcc tgggtacccc
540gagtctcccc cgacctcggg tcccaggtat gctcccacct ccacctgccc
cactcaccac 600ctctgctagt tccagacacc tcccaagcac gcagcaatgc
agctcaaaac gcttagccta 660gccacacccc cacgggaaac agcagtgatt
aacctttagc aataaacgaa agtttaacta 720agctatacta accccagggt
tggtcaattt cgtgccagcc acaccgagac ctggtccaga 780gtcgctagcc
gcgtcgctaa aaaaaaaaaa aaaaaaaaaa aaaaaaaagc atatgactaa
840aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa 900aaaaaaaa 90856908RNAArtificial sequenceModA murine
GM-CSF 56gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca
ccauguggcu 60gcagaaccug cuguuccugg gcaucguggu guacagccug agcgccccca
ccaggagccc 120caucaccgug accaggcccu ggaagcacgu ggaggccauc
aaggaggccc ugaaccugcu 180ggacgacaug cccgugaccc ugaacgagga
gguggaggug gugagcaacg aguucagcuu 240caagaagcug accugcgugc
agaccaggcu gaagaucuuc gagcagggcc ugaggggcaa 300cuucaccaag
cugaagggcg cccugaacau gaccgccagc uacuaccaga ccuacugccc
360ccccaccccc gagaccgacu gcgagaccca ggugaccacc uacgccgacu
ucaucgacag 420ccugaagacc uuccugaccg acauccccuu cgagugcaag
aagcccggcc agaagugaug 480acucgagcug guacugcaug cacgcaaugc
uagcugcccc uuucccgucc uggguacccc 540gagucucccc cgaccucggg
ucccagguau gcucccaccu ccaccugccc cacucaccac 600cucugcuagu
uccagacacc ucccaagcac gcagcaaugc agcucaaaac gcuuagccua
660gccacacccc cacgggaaac agcagugauu aaccuuuagc aauaaacgaa
aguuuaacua 720agcuauacua accccagggu uggucaauuu cgugccagcc
acaccgagac cugguccaga 780gucgcuagcc gcgucgcuaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaagc auaugacuaa 840aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 900aaaaaaaa
90857141PRTArtificial sequenceModB murine GM-CSF 57Met Trp Leu Gln
Asn Leu Leu Phe Leu Gly Ile Val Val Tyr Ser Leu1 5 10 15Ser Ala Pro
Thr Arg Ser Pro Ile Thr Val Thr Arg Pro Trp Lys His 20 25 30Val Glu
Ala Ile Lys Glu Ala Leu Asn Leu Leu Asp Asp Met Pro Val 35 40 45Thr
Leu Asn Glu Glu Val Glu Val Val Ser Asn Glu Phe Ser Phe Lys 50 55
60Lys Leu Thr Cys Val Gln Thr Arg Leu Lys Ile Phe Glu Gln Gly Leu65
70 75 80Arg Gly Asn Phe Thr Lys Leu Lys Gly Ala Leu Asn Met Thr Ala
Ser 85 90 95Tyr Tyr Gln Thr Tyr Cys Pro Pro Thr Pro Glu Thr Asp Cys
Glu Thr 100 105 110Gln Val Thr Thr Tyr Ala Asp Phe Ile Asp Ser Leu
Lys Thr Phe Leu 115 120 125Thr Asp Ile Pro Phe Glu Cys Lys Lys Pro
Gly Gln Lys 130 135 140581001DNAArtificial sequenceModB murine
GM-CSF (5'UTR-CDS-3'UTR) 58ggaataaact agtctcaaca caacatatac
aaaacaaacg aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat ttaaatcatt
tcttttaaag caaaagcaat tttctgaaaa 120ttttcaccat ttacgaacga
tagccatgtg gctgcagaac ctgctgttcc tgggcatcgt 180ggtgtacagc
ctgagcgccc ccaccaggag ccccatcacc gtgaccaggc cctggaagca
240cgtggaggcc atcaaggagg ccctgaacct gctggacgac atgcccgtga
ccctgaacga 300ggaggtggag gtggtgagca acgagttcag cttcaagaag
ctgacctgcg tgcagaccag 360gctgaagatc ttcgagcagg gcctgagggg
caacttcacc aagctgaagg gcgccctgaa 420catgaccgcc agctactacc
agacctactg cccccccacc cccgagaccg actgcgagac 480ccaggtgacc
acctacgccg acttcatcga cagcctgaag accttcctga ccgacatccc
540cttcgagtgc aagaagcccg gccagaagtg atgactcgag ctggtactgc
atgcacgcaa 600tgctagctgc ccctttcccg tcctgggtac cccgagtctc
ccccgacctc gggtcccagg 660tatgctccca cctccacctg ccccactcac
cacctctgct agttccagac acctcccaag 720cacgcagcaa tgcagctcaa
aacgcttagc ctagccacac ccccacggga aacagcagtg 780attaaccttt
agcaataaac gaaagtttaa ctaagctata ctaaccccag ggttggtcaa
840tttcgtgcca gccacaccga gacctggtcc agagtcgcta gccgcgtcgc
taaaaaaaaa 900aaaaaaaaaa aaaaaaaaaa agcatatgac taaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 960aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa a 1001591001RNAArtificial sequenceModB murine GM-CSF
59ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc aaucaagcau
60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau uuucugaaaa
120uuuucaccau uuacgaacga uagccaugug gcugcagaac cugcuguucc
ugggcaucgu 180gguguacagc cugagcgccc ccaccaggag ccccaucacc
gugaccaggc ccuggaagca 240cguggaggcc aucaaggagg cccugaaccu
gcuggacgac augcccguga cccugaacga 300ggagguggag guggugagca
acgaguucag cuucaagaag cugaccugcg ugcagaccag 360gcugaagauc
uucgagcagg gccugagggg caacuucacc aagcugaagg gcgcccugaa
420caugaccgcc agcuacuacc agaccuacug cccccccacc cccgagaccg
acugcgagac 480ccaggugacc accuacgccg acuucaucga cagccugaag
accuuccuga ccgacauccc 540cuucgagugc aagaagcccg gccagaagug
augacucgag cugguacugc augcacgcaa 600ugcuagcugc cccuuucccg
uccuggguac cccgagucuc ccccgaccuc gggucccagg 660uaugcuccca
ccuccaccug ccccacucac caccucugcu aguuccagac accucccaag
720cacgcagcaa ugcagcucaa aacgcuuagc cuagccacac ccccacggga
aacagcagug 780auuaaccuuu agcaauaaac gaaaguuuaa cuaagcuaua
cuaaccccag gguuggucaa 840uuucgugcca gccacaccga gaccuggucc
agagucgcua gccgcgucgc uaaaaaaaaa 900aaaaaaaaaa aaaaaaaaaa
agcauaugac uaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 960aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a 100160187PRTArtificial
sequenceModA FLT3L (human FLT3L in combination with a mouse
optimized secretion sequence) 60Met Gly Ala Met Ala Pro Arg Thr Leu
Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu Ala Pro Thr Gln Thr Arg Ala
Gly Pro Gly Ser Thr Gln Asp Cys 20 25 30Ser Phe Gln His Ser Pro Ile
Ser Ser Asp Phe Ala Val Lys Ile Arg 35 40 45Glu Leu Ser Asp Tyr Leu
Leu Gln Asp Tyr Pro Val Thr Val Ala Ser 50 55 60Asn Leu Gln Asp Glu
Glu Leu Cys Gly Gly Leu Trp Arg Leu Val Leu65 70 75 80Ala Gln Arg
Trp Met Glu Arg Leu Lys Thr Val Ala Gly Ser Lys Met 85 90 95Gln Gly
Leu Leu Glu Arg Val Asn Thr Glu Ile His Phe Val Thr Lys 100 105
110Cys Ala Phe Gln Pro Pro Pro Ser Cys Leu Arg Phe Val Gln Thr Asn
115 120 125Ile Ser Arg Leu Leu Gln Glu Thr Ser Glu Gln Leu Val Ala
Leu Lys 130 135 140Pro Trp Ile Thr Arg Gln Asn Phe Ser Arg Cys Leu
Glu Leu Gln Cys145 150 155 160Gln Pro Asp Ser Ser Thr Leu Pro Pro
Pro Trp Ser Pro Arg Pro Leu 165 170 175Glu Ala Thr Ala Pro Thr Ala
Pro Gln Pro Pro 180 185611027DNAArtificial sequenceModA FLT3L
(5'UTR-CDS-3'UTR) 61gggcgaacta gtattcttct ggtccccaca gactcagaga
gaacccgcca ccatgggcgc 60catggcccct agaacattgc tcctgctgct ggccgctgcc
ctggccccta cacagacaag 120agctggacct ggatccaccc aggactgcag
cttccagcac tcccctatct cctccgactt 180cgccgtgaag atccgggagc
tgtccgatta cctgctgcag gactaccctg tgaccgtggc 240cagcaacctg
caggacgaag aactgtgtgg cggcctgtgg cggctggtgc tggcccagcg
300gtggatggaa cggctgaaaa ccgtggccgg ctccaagatg cagggcctgc
tcgagcgggt 360gaacaccgag atccacttcg tgaccaagtg cgccttccag
cctcctcctt cctgcctgcg 420gttcgtgcag accaacatct cccggctgct
gcaggaaacc tccgagcagc tggtcgccct 480gaagccttgg atcacccggc
agaacttctc ccggtgtctg gaactccagt gtcagcccga 540ctcctccacc
ctgcctcctc cctggtcccc caggcctctg gaagccaccg cccctaccgc
600cccacagcct ccttgatagg tcgacgtcct ggtactgcat gcacgcaatg
ctagctgccc 660ctttcccgtc ctgggtaccc cgagtctccc ccgacctcgg
gtcccaggta tgctcccacc 720tccacctgcc ccactcacca cctctgctag
ttccagacac ctcccaagca cgcagcaatg 780cagctcaaaa cgcttagcct
agccacaccc ccacgggaaa cagcagtgat taacctttag 840caataaacga
aagtttaact aagctatact aaccccaggg ttggtcaatt tcgtgccagc
900cacaccctcg agctagcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagca
tatgactaaa 960aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1020aaaaaaa 1027621027RNAArtificial
sequenceModA FLT3L 62gggcgaacua guauucuucu gguccccaca gacucagaga
gaacccgcca ccaugggcgc 60cauggccccu agaacauugc uccugcugcu ggccgcugcc
cuggccccua cacagacaag 120agcuggaccu ggauccaccc aggacugcag
cuuccagcac uccccuaucu ccuccgacuu 180cgccgugaag auccgggagc
uguccgauua ccugcugcag gacuacccug ugaccguggc 240cagcaaccug
caggacgaag aacugugugg cggccugugg cggcuggugc uggcccagcg
300guggauggaa cggcugaaaa ccguggccgg cuccaagaug cagggccugc
ucgagcgggu 360gaacaccgag auccacuucg ugaccaagug cgccuuccag
ccuccuccuu ccugccugcg 420guucgugcag accaacaucu cccggcugcu
gcaggaaacc uccgagcagc uggucgcccu 480gaagccuugg aucacccggc
agaacuucuc ccggugucug gaacuccagu gucagcccga 540cuccuccacc
cugccuccuc ccuggucccc caggccucug gaagccaccg ccccuaccgc
600cccacagccu ccuugauagg ucgacguccu gguacugcau gcacgcaaug
cuagcugccc 660cuuucccguc cuggguaccc cgagucuccc ccgaccucgg
gucccaggua ugcucccacc 720uccaccugcc ccacucacca ccucugcuag
uuccagacac cucccaagca cgcagcaaug 780cagcucaaaa cgcuuagccu
agccacaccc ccacgggaaa cagcagugau uaaccuuuag 840caauaaacga
aaguuuaacu aagcuauacu aaccccaggg uuggucaauu ucgugccagc
900cacacccucg agcuagcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagca
uaugacuaaa 960aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1020aaaaaaa 102763187PRTArtificial
sequenceModB FLT3L (human FLT3L in combination with a mouse
optimized secretion sequence) 63Met Gly Ala Met Ala Pro Arg Thr Leu
Leu Leu Leu Leu Ala Ala Ala1 5 10 15Leu Ala Pro Thr Gln Thr Arg Ala
Gly Pro Gly Ser Thr Gln Asp Cys 20 25 30Ser Phe Gln His Ser Pro Ile
Ser Ser Asp Phe Ala Val Lys Ile Arg 35 40 45Glu Leu Ser Asp Tyr Leu
Leu Gln Asp Tyr Pro Val Thr Val Ala Ser 50 55 60Asn Leu Gln Asp Glu
Glu Leu Cys Gly Gly Leu Trp Arg Leu Val Leu65 70 75 80Ala Gln Arg
Trp Met Glu Arg Leu Lys Thr Val Ala Gly Ser Lys Met 85 90 95Gln Gly
Leu Leu Glu Arg Val Asn Thr Glu Ile His Phe Val Thr Lys 100 105
110Cys Ala Phe Gln Pro Pro Pro Ser Cys Leu Arg Phe Val Gln Thr Asn
115 120 125Ile Ser Arg Leu Leu Gln Glu Thr Ser Glu Gln Leu Val Ala
Leu Lys 130 135 140Pro Trp Ile Thr Arg Gln Asn Phe Ser Arg Cys Leu
Glu Leu Gln Cys145 150 155 160Gln Pro Asp Ser Ser Thr Leu Pro Pro
Pro Trp Ser Pro Arg Pro Leu 165 170 175Glu Ala Thr Ala Pro Thr Ala
Pro Gln Pro Pro 180 185641120DNAArtificial sequenceModB FLT3L
(5'UTR-CDS-3'UTR) 64ggaataaact agtctcaaca caacatatac aaaacaaacg
aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat ttaaatcatt tcttttaaag
caaaagcaat tttctgaaaa 120ttttcaccat ttacgaacga tagccatggg
cgccatggcc cctagaacat tgctcctgct 180gctggccgct gccctggccc
ctacacagac aagagctgga cctggatcca cccaggactg 240cagcttccag
cactccccta tctcctccga cttcgccgtg aagatccggg agctgtccga
300ttacctgctg caggactacc ctgtgaccgt ggccagcaac ctgcaggacg
aagaactgtg 360tggcggcctg tggcggctgg tgctggccca gcggtggatg
gaacggctga aaaccgtggc 420cggctccaag atgcagggcc tgctcgagcg
ggtgaacacc gagatccact tcgtgaccaa 480gtgcgccttc cagcctcctc
cttcctgcct gcggttcgtg cagaccaaca tctcccggct 540gctgcaggaa
acctccgagc agctggtcgc cctgaagcct tggatcaccc ggcagaactt
600ctcccggtgt ctggaactcc agtgtcagcc cgactcctcc accctgcctc
ctccctggtc 660ccccaggcct ctggaagcca ccgcccctac cgccccacag
cctccttgat aggtcgacgt 720cctggtactg catgcacgca atgctagctg
cccctttccc gtcctgggta ccccgagtct 780cccccgacct cgggtcccag
gtatgctccc acctccacct gccccactca ccacctctgc 840tagttccaga
cacctcccaa gcacgcagca atgcagctca aaacgcttag cctagccaca
900cccccacggg aaacagcagt gattaacctt tagcaataaa cgaaagttta
actaagctat 960actaacccca gggttggtca atttcgtgcc agccacaccc
tcgagctagc aaaaaaaaaa 1020aaaaaaaaaa aaaaaaaaaa gcatatgact
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1080aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1120651120RNAArtificial sequenceModB murine
FLT3L 65ggaauaaacu agucucaaca caacauauac aaaacaaacg aaucucaagc
aaucaagcau 60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag caaaagcaau
uuucugaaaa 120uuuucaccau uuacgaacga uagccauggg cgccauggcc
ccuagaacau ugcuccugcu 180gcuggccgcu gcccuggccc cuacacagac
aagagcugga ccuggaucca cccaggacug 240cagcuuccag cacuccccua
ucuccuccga cuucgccgug aagauccggg agcuguccga 300uuaccugcug
caggacuacc cugugaccgu ggccagcaac cugcaggacg aagaacugug
360uggcggccug uggcggcugg ugcuggccca gcgguggaug gaacggcuga
aaaccguggc 420cggcuccaag augcagggcc ugcucgagcg ggugaacacc
gagauccacu ucgugaccaa 480gugcgccuuc cagccuccuc cuuccugccu
gcgguucgug cagaccaaca ucucccggcu 540gcugcaggaa accuccgagc
agcuggucgc ccugaagccu uggaucaccc ggcagaacuu 600cucccggugu
cuggaacucc agugucagcc cgacuccucc acccugccuc cucccugguc
660ccccaggccu cuggaagcca ccgccccuac cgccccacag ccuccuugau
aggucgacgu 720ccugguacug caugcacgca augcuagcug ccccuuuccc
guccugggua ccccgagucu 780cccccgaccu cgggucccag guaugcuccc
accuccaccu gccccacuca ccaccucugc 840uaguuccaga caccucccaa
gcacgcagca augcagcuca aaacgcuuag ccuagccaca 900cccccacggg
aaacagcagu gauuaaccuu uagcaauaaa cgaaaguuua acuaagcuau
960acuaacccca ggguugguca auuucgugcc agccacaccc ucgagcuagc
aaaaaaaaaa 1020aaaaaaaaaa aaaaaaaaaa gcauaugacu aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 1080aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa 112066309PRTArtificial sequenceModA murine 41BBL 66Met
Asp Gln His Thr Leu Asp Val Glu Asp Thr Ala Asp Ala Arg His1 5 10
15Pro Ala Gly Thr Ser Cys Pro Ser Asp Ala Ala Leu Leu Arg Asp Thr
20 25 30Gly Leu Leu Ala Asp Ala Ala Leu Leu Ser Asp Thr Val Arg Pro
Thr 35 40 45Asn Ala Ala Leu Pro Thr Asp Ala Ala Tyr Pro Ala Val Asn
Val Arg 50 55 60Asp Arg Glu Ala Ala Trp Pro Pro Ala Leu Asn Phe Cys
Ser Arg His65 70 75 80Pro Lys Leu Tyr Gly Leu Val Ala Leu Val Leu
Leu Leu Leu Ile Ala 85 90 95Ala Cys Val Pro Ile Phe Thr Arg Thr Glu
Pro Arg Pro Ala Leu Thr 100 105 110Ile Thr Thr Ser Pro Asn Leu Gly
Thr Arg Glu Asn Asn Ala Asp Gln 115 120 125Val Thr Pro Val Ser His
Ile Gly Cys Pro Asn Thr Thr Gln Gln Gly 130 135 140Ser Pro Val Phe
Ala Lys Leu Leu Ala Lys Asn Gln Ala Ser Leu Cys145 150 155 160Asn
Thr Thr Leu Asn Trp His Ser Gln Asp Gly Ala Gly Ser Ser Tyr 165 170
175Leu Ser Gln Gly Leu Arg Tyr Glu Glu Asp Lys Lys Glu Leu Val Val
180 185 190Asp Ser Pro Gly Leu Tyr Tyr Val Phe Leu Glu Leu Lys
Leu
Ser Pro 195 200 205Thr Phe Thr Asn Thr Gly His Lys Val Gln Gly Trp
Val Ser Leu Val 210 215 220Leu Gln Ala Lys Pro Gln Val Asp Asp Phe
Asp Asn Leu Ala Leu Thr225 230 235 240Val Glu Leu Phe Pro Cys Ser
Met Glu Asn Lys Leu Val Asp Arg Ser 245 250 255Trp Ser Gln Leu Leu
Leu Leu Lys Ala Gly His Arg Leu Ser Val Gly 260 265 270Leu Arg Ala
Tyr Leu His Gly Ala Gln Asp Ala Tyr Arg Asp Trp Glu 275 280 285Leu
Ser Tyr Pro Asn Thr Thr Ser Phe Gly Leu Phe Leu Val Lys Pro 290 295
300Asp Asn Pro Trp Glu305671393DNAArtificial sequenceModA murine
41BBL (5'UTR-CDS-3'UTR) 67gggcgaacta gtattcttct ggtccccaca
gactcagaga gaacccgcca ccatggacca 60gcacacactt gatgtggagg ataccgcgga
tgccagacat ccagcaggta cttcgtgccc 120ctcggatgcg gcgctcctca
gagataccgg gctcctcgcg gacgctgcgc tcctctcaga 180tactgtgcgc
cccacaaatg ccgcgctccc cacggatgct gcctaccctg cggttaatgt
240tcgggatcgc gaggccgcgt ggccgcctgc actgaacttc tgttcccgcc
acccaaagct 300ctatggccta gtcgctttgg ttttgctgct tctgatcgcc
gcctgtgttc ctatcttcac 360ccgcaccgag cctcggccag cgctcacaat
caccacctcg cccaacctgg gtacccgaga 420gaataatgca gaccaggtca
cccctgtttc ccacattggc tgccccaaca ctacacaaca 480gggctctcct
gtgttcgcca agctactggc taaaaaccaa gcatcgttgt gcaatacaac
540tctgaactgg cacagccaag atggagctgg gagctcatac ctatctcaag
gtctgaggta 600cgaagaagac aaaaaggagt tggtggtaga cagtcccggg
ctctactacg tatttttgga 660actgaagctc agtccaacat tcacaaacac
aggccacaag gtgcagggct gggtctctct 720tgttttgcaa gcaaagcctc
aggtagatga ctttgacaac ttggccctga cagtggaact 780gttcccttgc
tccatggaga acaagttagt ggaccgttcc tggagtcaac tgttgctcct
840gaaggctggc caccgcctca gtgtgggtct gagggcttat ctgcatggag
cccaggatgc 900atacagagac tgggagctgt cttatcccaa caccaccagc
tttggactct ttcttgtgaa 960acccgacaac ccatgggaat gatagggatc
cgatctggta ctgcatgcac gcaatgctag 1020ctgccccttt cccgtcctgg
gtaccccgag tctcccccga cctcgggtcc caggtatgct 1080cccacctcca
cctgccccac tcaccacctc tgctagttcc agacacctcc caagcacgca
1140gcaatgcagc tcaaaacgct tagcctagcc acacccccac gggaaacagc
agtgattaac 1200ctttagcaat aaacgaaagt ttaactaagc tatactaacc
ccagggttgg tcaatttcgt 1260gccagccaca ccctcgagct agcaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaagcatatg 1320actaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1380aaaaaaaaaa aaa
1393681393RNAArtificial sequenceModA murine 41BBL 68gggcgaacua
guauucuucu gguccccaca gacucagaga gaacccgcca ccauggacca 60gcacacacuu
gauguggagg auaccgcgga ugccagacau ccagcaggua cuucgugccc
120cucggaugcg gcgcuccuca gagauaccgg gcuccucgcg gacgcugcgc
uccucucaga 180uacugugcgc cccacaaaug ccgcgcuccc cacggaugcu
gccuacccug cgguuaaugu 240ucgggaucgc gaggccgcgu ggccgccugc
acugaacuuc uguucccgcc acccaaagcu 300cuauggccua gucgcuuugg
uuuugcugcu ucugaucgcc gccuguguuc cuaucuucac 360ccgcaccgag
ccucggccag cgcucacaau caccaccucg cccaaccugg guacccgaga
420gaauaaugca gaccagguca ccccuguuuc ccacauuggc ugccccaaca
cuacacaaca 480gggcucuccu guguucgcca agcuacuggc uaaaaaccaa
gcaucguugu gcaauacaac 540ucugaacugg cacagccaag auggagcugg
gagcucauac cuaucucaag gucugaggua 600cgaagaagac aaaaaggagu
uggugguaga cagucccggg cucuacuacg uauuuuugga 660acugaagcuc
aguccaacau ucacaaacac aggccacaag gugcagggcu gggucucucu
720uguuuugcaa gcaaagccuc agguagauga cuuugacaac uuggcccuga
caguggaacu 780guucccuugc uccauggaga acaaguuagu ggaccguucc
uggagucaac uguugcuccu 840gaaggcuggc caccgccuca gugugggucu
gagggcuuau cugcauggag cccaggaugc 900auacagagac ugggagcugu
cuuaucccaa caccaccagc uuuggacucu uucuugugaa 960acccgacaac
ccaugggaau gauagggauc cgaucuggua cugcaugcac gcaaugcuag
1020cugccccuuu cccguccugg guaccccgag ucucccccga ccucgggucc
cagguaugcu 1080cccaccucca ccugccccac ucaccaccuc ugcuaguucc
agacaccucc caagcacgca 1140gcaaugcagc ucaaaacgcu uagccuagcc
acacccccac gggaaacagc agugauuaac 1200cuuuagcaau aaacgaaagu
uuaacuaagc uauacuaacc ccaggguugg ucaauuucgu 1260gccagccaca
cccucgagcu agcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaagcauaug
1320acuaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa 1380aaaaaaaaaa aaa 139369309PRTArtificial sequenceModB
murine 41BBL 69Met Asp Gln His Thr Leu Asp Val Glu Asp Thr Ala Asp
Ala Arg His1 5 10 15Pro Ala Gly Thr Ser Cys Pro Ser Asp Ala Ala Leu
Leu Arg Asp Thr 20 25 30Gly Leu Leu Ala Asp Ala Ala Leu Leu Ser Asp
Thr Val Arg Pro Thr 35 40 45Asn Ala Ala Leu Pro Thr Asp Ala Ala Tyr
Pro Ala Val Asn Val Arg 50 55 60Asp Arg Glu Ala Ala Trp Pro Pro Ala
Leu Asn Phe Cys Ser Arg His65 70 75 80Pro Lys Leu Tyr Gly Leu Val
Ala Leu Val Leu Leu Leu Leu Ile Ala 85 90 95Ala Cys Val Pro Ile Phe
Thr Arg Thr Glu Pro Arg Pro Ala Leu Thr 100 105 110Ile Thr Thr Ser
Pro Asn Leu Gly Thr Arg Glu Asn Asn Ala Asp Gln 115 120 125Val Thr
Pro Val Ser His Ile Gly Cys Pro Asn Thr Thr Gln Gln Gly 130 135
140Ser Pro Val Phe Ala Lys Leu Leu Ala Lys Asn Gln Ala Ser Leu
Cys145 150 155 160Asn Thr Thr Leu Asn Trp His Ser Gln Asp Gly Ala
Gly Ser Ser Tyr 165 170 175Leu Ser Gln Gly Leu Arg Tyr Glu Glu Asp
Lys Lys Glu Leu Val Val 180 185 190Asp Ser Pro Gly Leu Tyr Tyr Val
Phe Leu Glu Leu Lys Leu Ser Pro 195 200 205Thr Phe Thr Asn Thr Gly
His Lys Val Gln Gly Trp Val Ser Leu Val 210 215 220Leu Gln Ala Lys
Pro Gln Val Asp Asp Phe Asp Asn Leu Ala Leu Thr225 230 235 240Val
Glu Leu Phe Pro Cys Ser Met Glu Asn Lys Leu Val Asp Arg Ser 245 250
255Trp Ser Gln Leu Leu Leu Leu Lys Ala Gly His Arg Leu Ser Val Gly
260 265 270Leu Arg Ala Tyr Leu His Gly Ala Gln Asp Ala Tyr Arg Asp
Trp Glu 275 280 285Leu Ser Tyr Pro Asn Thr Thr Ser Phe Gly Leu Phe
Leu Val Lys Pro 290 295 300Asp Asn Pro Trp
Glu305701486DNAArtificial sequenceModB murine 41BBL
(5'UTR-CDS-3'UTR) 70ggaataaact agtctcaaca caacatatac aaaacaaacg
aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat ttaaatcatt tcttttaaag
caaaagcaat tttctgaaaa 120ttttcaccat ttacgaacga tagccatgga
ccagcacaca cttgatgtgg aggataccgc 180ggatgccaga catccagcag
gtacttcgtg cccctcggat gcggcgctcc tcagagatac 240cgggctcctc
gcggacgctg cgctcctctc agatactgtg cgccccacaa atgccgcgct
300ccccacggat gctgcctacc ctgcggttaa tgttcgggat cgcgaggccg
cgtggccgcc 360tgcactgaac ttctgttccc gccacccaaa gctctatggc
ctagtcgctt tggttttgct 420gcttctgatc gccgcctgtg ttcctatctt
cacccgcacc gagcctcggc cagcgctcac 480aatcaccacc tcgcccaacc
tgggtacccg agagaataat gcagaccagg tcacccctgt 540ttcccacatt
ggctgcccca acactacaca acagggctct cctgtgttcg ccaagctact
600ggctaaaaac caagcatcgt tgtgcaatac aactctgaac tggcacagcc
aagatggagc 660tgggagctca tacctatctc aaggtctgag gtacgaagaa
gacaaaaagg agttggtggt 720agacagtccc gggctctact acgtattttt
ggaactgaag ctcagtccaa cattcacaaa 780cacaggccac aaggtgcagg
gctgggtctc tcttgttttg caagcaaagc ctcaggtaga 840tgactttgac
aacttggccc tgacagtgga actgttccct tgctccatgg agaacaagtt
900agtggaccgt tcctggagtc aactgttgct cctgaaggct ggccaccgcc
tcagtgtggg 960tctgagggct tatctgcatg gagcccagga tgcatacaga
gactgggagc tgtcttatcc 1020caacaccacc agctttggac tctttcttgt
gaaacccgac aacccatggg aatgataggg 1080atccgatctg gtactgcatg
cacgcaatgc tagctgcccc tttcccgtcc tgggtacccc 1140gagtctcccc
cgacctcggg tcccaggtat gctcccacct ccacctgccc cactcaccac
1200ctctgctagt tccagacacc tcccaagcac gcagcaatgc agctcaaaac
gcttagccta 1260gccacacccc cacgggaaac agcagtgatt aacctttagc
aataaacgaa agtttaacta 1320agctatacta accccagggt tggtcaattt
cgtgccagcc acaccctcga gctagcaaaa 1380aaaaaaaaaa aaaaaaaaaa
aaaaaagcat atgactaaaa aaaaaaaaaa aaaaaaaaaa 1440aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa 1486711486RNAArtificial
sequenceModB murine 41BBL 71ggaauaaacu agucucaaca caacauauac
aaaacaaacg aaucucaagc aaucaagcau 60ucuacuucua uugcagcaau uuaaaucauu
ucuuuuaaag caaaagcaau uuucugaaaa 120uuuucaccau uuacgaacga
uagccaugga ccagcacaca cuugaugugg aggauaccgc 180ggaugccaga
cauccagcag guacuucgug ccccucggau gcggcgcucc ucagagauac
240cgggcuccuc gcggacgcug cgcuccucuc agauacugug cgccccacaa
augccgcgcu 300ccccacggau gcugccuacc cugcgguuaa uguucgggau
cgcgaggccg cguggccgcc 360ugcacugaac uucuguuccc gccacccaaa
gcucuauggc cuagucgcuu ugguuuugcu 420gcuucugauc gccgccugug
uuccuaucuu cacccgcacc gagccucggc cagcgcucac 480aaucaccacc
ucgcccaacc uggguacccg agagaauaau gcagaccagg ucaccccugu
540uucccacauu ggcugcccca acacuacaca acagggcucu ccuguguucg
ccaagcuacu 600ggcuaaaaac caagcaucgu ugugcaauac aacucugaac
uggcacagcc aagauggagc 660ugggagcuca uaccuaucuc aaggucugag
guacgaagaa gacaaaaagg aguugguggu 720agacaguccc gggcucuacu
acguauuuuu ggaacugaag cucaguccaa cauucacaaa 780cacaggccac
aaggugcagg gcugggucuc ucuuguuuug caagcaaagc cucagguaga
840ugacuuugac aacuuggccc ugacagugga acuguucccu ugcuccaugg
agaacaaguu 900aguggaccgu uccuggaguc aacuguugcu ccugaaggcu
ggccaccgcc ucaguguggg 960ucugagggcu uaucugcaug gagcccagga
ugcauacaga gacugggagc ugucuuaucc 1020caacaccacc agcuuuggac
ucuuucuugu gaaacccgac aacccauggg aaugauaggg 1080auccgaucug
guacugcaug cacgcaaugc uagcugcccc uuucccgucc uggguacccc
1140gagucucccc cgaccucggg ucccagguau gcucccaccu ccaccugccc
cacucaccac 1200cucugcuagu uccagacacc ucccaagcac gcagcaaugc
agcucaaaac gcuuagccua 1260gccacacccc cacgggaaac agcagugauu
aaccuuuagc aauaaacgaa aguuuaacua 1320agcuauacua accccagggu
uggucaauuu cgugccagcc acacccucga gcuagcaaaa 1380aaaaaaaaaa
aaaaaaaaaa aaaaaagcau augacuaaaa aaaaaaaaaa aaaaaaaaaa
1440aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
148672935PRTArtificial sequenceModA murine CD27L-CD40L 72Met Arg
Val Thr Ala Pro Arg Thr Leu Ile Leu Leu Leu Ser Gly Ala1 5 10 15Leu
Ala Leu Thr Glu Thr Trp Ala Gly Ser Gly Ser His Pro Glu Pro 20 25
30His Thr Ala Glu Leu Gln Leu Asn Leu Thr Val Pro Arg Lys Asp Pro
35 40 45Thr Leu Arg Trp Gly Ala Gly Pro Ala Leu Gly Arg Ser Phe Thr
His 50 55 60Gly Pro Glu Leu Glu Glu Gly His Leu Arg Ile His Gln Asp
Gly Leu65 70 75 80Tyr Arg Leu His Ile Gln Val Thr Leu Ala Asn Cys
Ser Ser Pro Gly 85 90 95Ser Thr Leu Gln His Arg Ala Thr Leu Ala Val
Gly Ile Cys Ser Pro 100 105 110Ala Ala His Gly Ile Ser Leu Leu Arg
Gly Arg Phe Gly Gln Asp Cys 115 120 125Thr Val Ala Leu Gln Arg Leu
Thr Tyr Leu Val His Gly Asp Val Leu 130 135 140Cys Thr Asn Leu Thr
Leu Pro Leu Leu Pro Ser Arg Asn Ala Asp Glu145 150 155 160Thr Phe
Phe Gly Val Gln Trp Ile Cys Pro Gly Gly Gly Ser Gly Gly 165 170
175Gly His Pro Glu Pro His Thr Ala Glu Leu Gln Leu Asn Leu Thr Val
180 185 190Pro Arg Lys Asp Pro Thr Leu Arg Trp Gly Ala Gly Pro Ala
Leu Gly 195 200 205Arg Ser Phe Thr His Gly Pro Glu Leu Glu Glu Gly
His Leu Arg Ile 210 215 220His Gln Asp Gly Leu Tyr Arg Leu His Ile
Gln Val Thr Leu Ala Asn225 230 235 240Cys Ser Ser Pro Gly Ser Thr
Leu Gln His Arg Ala Thr Leu Ala Val 245 250 255Gly Ile Cys Ser Pro
Ala Ala His Gly Ile Ser Leu Leu Arg Gly Arg 260 265 270Phe Gly Gln
Asp Cys Thr Val Ala Leu Gln Arg Leu Thr Tyr Leu Val 275 280 285His
Gly Asp Val Leu Cys Thr Asn Leu Thr Leu Pro Leu Leu Pro Ser 290 295
300Arg Asn Ala Asp Glu Thr Phe Phe Gly Val Gln Trp Ile Cys Pro
Gly305 310 315 320Gly Gly Ser Gly Gly Gly His Pro Glu Pro His Thr
Ala Glu Leu Gln 325 330 335Leu Asn Leu Thr Val Pro Arg Lys Asp Pro
Thr Leu Arg Trp Gly Ala 340 345 350Gly Pro Ala Leu Gly Arg Ser Phe
Thr His Gly Pro Glu Leu Glu Glu 355 360 365Gly His Leu Arg Ile His
Gln Asp Gly Leu Tyr Arg Leu His Ile Gln 370 375 380Val Thr Leu Ala
Asn Cys Ser Ser Pro Gly Ser Thr Leu Gln His Arg385 390 395 400Ala
Thr Leu Ala Val Gly Ile Cys Ser Pro Ala Ala His Gly Ile Ser 405 410
415Leu Leu Arg Gly Arg Phe Gly Gln Asp Cys Thr Val Ala Leu Gln Arg
420 425 430Leu Thr Tyr Leu Val His Gly Asp Val Leu Cys Thr Asn Leu
Thr Leu 435 440 445Pro Leu Leu Pro Ser Arg Asn Ala Asp Glu Thr Phe
Phe Gly Val Gln 450 455 460Trp Ile Cys Pro Gly Gly Gly Gly Ser Gly
Gly Gly Gly Ser Gly Gly465 470 475 480Gly Gly Ser Gly Asp Glu Asp
Pro Gln Ile Ala Ala His Val Val Ser 485 490 495Glu Ala Asn Ser Asn
Ala Ala Ser Val Leu Gln Trp Ala Lys Lys Gly 500 505 510Tyr Tyr Thr
Met Lys Ser Asn Leu Val Met Leu Glu Asn Gly Lys Gln 515 520 525Leu
Thr Val Lys Arg Glu Gly Leu Tyr Tyr Val Tyr Thr Gln Val Thr 530 535
540Phe Cys Ser Asn Arg Glu Pro Ser Ser Gln Arg Pro Phe Ile Val
Gly545 550 555 560Leu Trp Leu Lys Pro Ser Ser Gly Ser Glu Arg Ile
Leu Leu Lys Ala 565 570 575Ala Asn Thr His Ser Ser Ser Gln Leu Cys
Glu Gln Gln Ser Val His 580 585 590Leu Gly Gly Val Phe Glu Leu Gln
Ala Gly Ala Ser Val Phe Val Asn 595 600 605Val Thr Glu Ala Ser Gln
Val Ile His Arg Val Gly Phe Ser Ser Phe 610 615 620Gly Leu Leu Lys
Leu Gly Gly Gly Ser Gly Gly Gly Gly Asp Glu Asp625 630 635 640Pro
Gln Ile Ala Ala His Val Val Ser Glu Ala Asn Ser Asn Ala Ala 645 650
655Ser Val Leu Gln Trp Ala Lys Lys Gly Tyr Tyr Thr Met Lys Ser Asn
660 665 670Leu Val Met Leu Glu Asn Gly Lys Gln Leu Thr Val Lys Arg
Glu Gly 675 680 685Leu Tyr Tyr Val Tyr Thr Gln Val Thr Phe Cys Ser
Asn Arg Glu Pro 690 695 700Ser Ser Gln Arg Pro Phe Ile Val Gly Leu
Trp Leu Lys Pro Ser Ser705 710 715 720Gly Ser Glu Arg Ile Leu Leu
Lys Ala Ala Asn Thr His Ser Ser Ser 725 730 735Gln Leu Cys Glu Gln
Gln Ser Val His Leu Gly Gly Val Phe Glu Leu 740 745 750Gln Ala Gly
Ala Ser Val Phe Val Asn Val Thr Glu Ala Ser Gln Val 755 760 765Ile
His Arg Val Gly Phe Ser Ser Phe Gly Leu Leu Lys Leu Gly Gly 770 775
780Gly Ser Gly Gly Gly Gly Asp Glu Asp Pro Gln Ile Ala Ala His
Val785 790 795 800Val Ser Glu Ala Asn Ser Asn Ala Ala Ser Val Leu
Gln Trp Ala Lys 805 810 815Lys Gly Tyr Tyr Thr Met Lys Ser Asn Leu
Val Met Leu Glu Asn Gly 820 825 830Lys Gln Leu Thr Val Lys Arg Glu
Gly Leu Tyr Tyr Val Tyr Thr Gln 835 840 845Val Thr Phe Cys Ser Asn
Arg Glu Pro Ser Ser Gln Arg Pro Phe Ile 850 855 860Val Gly Leu Trp
Leu Lys Pro Ser Ser Gly Ser Glu Arg Ile Leu Leu865 870 875 880Lys
Ala Ala Asn Thr His Ser Ser Ser Gln Leu Cys Glu Gln Gln Ser 885 890
895Val His Leu Gly Gly Val Phe Glu Leu Gln Ala Gly Ala Ser Val Phe
900 905 910Val Asn Val Thr Glu Ala Ser Gln Val Ile His Arg Val Gly
Phe Ser 915 920 925Ser Phe Gly Leu Leu Lys Leu 930
935733281DNAArtificial sequenceModA murine CD27L-CD40L
(5'UTR-CDS-3'UTR) 73gggcgaacta gtattcttct ggtccccaca gactcagaga
gaacccgcca ccatgagagt 60gaccgccccc agaaccctga tcctgctgct gtctggcgcc
ctggccctga cagagacatg 120ggccggaagc ggatcccacc ccgagcccca
caccgccgaa ctgcagctga acctgaccgt 180gcccagaaag gaccccaccc
tgagatgggg agctggccct gctctgggca gatcctttac 240acacggcccc
gagctggaag aaggccacct gagaatccac caggacggcc tgtacagact
300gcacatccaa gtgaccctgg ccaactgcag cagccctggc tctaccctgc
agcacagagc 360cacactggcc gtgggcatct gtagccctgc tgctcacgga
atcagcctgc tgagaggcag 420attcggccag gactgtaccg tggccctgca
gaggctgacc tatctggtgc atggcgacgt 480gctgtgcacc aacctgacac
tgcctctgct gcccagcaga aacgccgacg aaacattctt 540tggagtgcag
tggatttgtc ctggcggagg gtccggggga ggacacccag aacctcatac
600agctgaactg cagctgaacc tgaccgtgcc
cagaaaggac cccaccctga gatggggagc 660tggccctgct ctgggcagat
cctttacaca cggccccgag ctggaagaag gccacctgag 720aatccaccag
gacggcctgt acagactgca catccaagtg accctggcca actgcagcag
780ccctggctct accctgcagc acagagccac actggccgtg ggcatctgta
gccctgctgc 840tcacggaatc agcctgctga gaggcagatt cggccaggac
tgtaccgtgg ccctgcagag 900gctgacctat ctggtgcatg gcgacgtgct
gtgcaccaac ctgacactgc ctctgctgcc 960cagcagaaac gccgacgaaa
cattctttgg agtgcagtgg atttgtcctg ggggaggctc 1020cggaggcgga
caccctgaac ctcatacagc tgaactgcag ctgaacctga ccgtgcccag
1080aaaggacccc accctgagat ggggagctgg ccctgctctg ggcagatcct
ttacacacgg 1140ccccgagctg gaagaaggcc acctgagaat ccaccaggac
ggcctgtaca gactgcacat 1200ccaagtgacc ctggccaact gcagcagccc
tggctctacc ctgcagcaca gagccacact 1260ggccgtgggc atctgtagcc
ctgctgctca cggaatcagc ctgctgagag gcagattcgg 1320ccaggactgt
accgtggccc tgcagaggct gacctatctg gtgcatggcg acgtgctgtg
1380caccaacctg acactgcctc tgctgcccag cagaaacgcc gacgagacct
tcttcggcgt 1440ccagtggatc tgccccggag gcggtggtag tggaggtggc
gggtccggtg gaggtggaag 1500cggcgacgag gacccccaga tcgccgccca
cgtggtgtct gaggccaaca gcaacgccgc 1560ctctgtgctg cagtgggcca
agaaaggcta ctacaccatg aagtccaacc tcgtgatgct 1620ggaaaacggc
aagcagctga ccgtgaagcg cgagggcctg tactatgtgt acacccaagt
1680gacattctgc agcaaccgcg agcccagcag ccagaggcct tttatcgtgg
gcctgtggct 1740gaagcctagc agcggcagcg agagaatcct gctgaaggcc
gccaacaccc acagcagctc 1800tcagctgtgc gagcagcagt ctgtgcacct
gggaggcgtg ttcgagctgc aagctggcgc 1860ttccgtgttc gtgaacgtga
ccgaggccag ccaagtgatc cacagagtgg gcttcagcag 1920ctttggactg
ctcaaactgg gcggagggtc cggcggaggc ggagatgaag atcctcagat
1980tgctgcccac gtggtgtctg aggccaacag caacgccgcc tctgtgctgc
agtgggccaa 2040gaaaggctac tacaccatga agtccaacct cgtgatgctg
gaaaacggca agcagctgac 2100cgtgaagcgc gagggcctgt actatgtgta
cacccaagtg acattctgca gcaaccgcga 2160gcccagcagc cagaggcctt
ttatcgtggg cctgtggctg aagcctagca gcggcagcga 2220gagaatcctg
ctgaaggccg ccaacaccca cagcagctct cagctgtgcg agcagcagtc
2280tgtgcacctg ggaggcgtgt tcgagctgca agctggcgct tccgtgttcg
tgaacgtgac 2340cgaggccagc caagtgatcc acagagtggg cttcagcagc
tttggactgc tcaaactggg 2400aggcggctcc ggaggcggag gagatgaaga
tcctcagatt gctgcccacg tggtgtctga 2460ggccaacagc aacgccgcct
ctgtgctgca gtgggccaag aaaggctact acaccatgaa 2520gtccaacctc
gtgatgctgg aaaacggcaa gcagctgacc gtgaagcgcg agggcctgta
2580ctatgtgtac acccaagtga cattctgcag caaccgcgag cccagcagcc
agaggccttt 2640tatcgtgggc ctgtggctga agcctagcag cggcagcgag
agaatcctgc tgaaggccgc 2700caacacccac agcagctctc agctgtgcga
gcagcagtct gtgcacctgg gaggcgtgtt 2760cgagctgcaa gctggcgctt
ccgtgttcgt gaacgtgacc gaggccagcc aagtgatcca 2820cagagtgggc
ttctcctcct tcggcctcct gaagctgtga ctcgagagct cgctttcttg
2880ctgtccaatt tctattaaag gttcctttgt tccctaagtc caactactaa
actgggggat 2940attatgaagg gccttgagca tctggattct gcctaataaa
aaacatttat tttcattgct 3000gcgtcgagag ctcgctttct tgctgtccaa
tttctattaa aggttccttt gttccctaag 3060tccaactact aaactggggg
atattatgaa gggccttgag catctggatt ctgcctaata 3120aaaaacattt
attttcattg ctgcgtcgag acctggtcca gagtcgctag caaaaaaaaa
3180aaaaaaaaaa aaaaaaaaaa agcatatgac taaaaaaaaa aaaaaaaaaa
aaaaaaaaaa 3240aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
3281743281RNAArtificial sequenceModA murine CD27L-CD40L
74gggcgaacua guauucuucu gguccccaca gacucagaga gaacccgcca ccaugagagu
60gaccgccccc agaacccuga uccugcugcu gucuggcgcc cuggcccuga cagagacaug
120ggccggaagc ggaucccacc ccgagcccca caccgccgaa cugcagcuga
accugaccgu 180gcccagaaag gaccccaccc ugagaugggg agcuggcccu
gcucugggca gauccuuuac 240acacggcccc gagcuggaag aaggccaccu
gagaauccac caggacggcc uguacagacu 300gcacauccaa gugacccugg
ccaacugcag cagcccuggc ucuacccugc agcacagagc 360cacacuggcc
gugggcaucu guagcccugc ugcucacgga aucagccugc ugagaggcag
420auucggccag gacuguaccg uggcccugca gaggcugacc uaucuggugc
auggcgacgu 480gcugugcacc aaccugacac ugccucugcu gcccagcaga
aacgccgacg aaacauucuu 540uggagugcag uggauuuguc cuggcggagg
guccggggga ggacacccag aaccucauac 600agcugaacug cagcugaacc
ugaccgugcc cagaaaggac cccacccuga gauggggagc 660uggcccugcu
cugggcagau ccuuuacaca cggccccgag cuggaagaag gccaccugag
720aauccaccag gacggccugu acagacugca cauccaagug acccuggcca
acugcagcag 780cccuggcucu acccugcagc acagagccac acuggccgug
ggcaucugua gcccugcugc 840ucacggaauc agccugcuga gaggcagauu
cggccaggac uguaccgugg cccugcagag 900gcugaccuau cuggugcaug
gcgacgugcu gugcaccaac cugacacugc cucugcugcc 960cagcagaaac
gccgacgaaa cauucuuugg agugcagugg auuuguccug ggggaggcuc
1020cggaggcgga cacccugaac cucauacagc ugaacugcag cugaaccuga
ccgugcccag 1080aaaggacccc acccugagau ggggagcugg cccugcucug
ggcagauccu uuacacacgg 1140ccccgagcug gaagaaggcc accugagaau
ccaccaggac ggccuguaca gacugcacau 1200ccaagugacc cuggccaacu
gcagcagccc uggcucuacc cugcagcaca gagccacacu 1260ggccgugggc
aucuguagcc cugcugcuca cggaaucagc cugcugagag gcagauucgg
1320ccaggacugu accguggccc ugcagaggcu gaccuaucug gugcauggcg
acgugcugug 1380caccaaccug acacugccuc ugcugcccag cagaaacgcc
gacgagaccu ucuucggcgu 1440ccaguggauc ugccccggag gcggugguag
uggagguggc ggguccggug gagguggaag 1500cggcgacgag gacccccaga
ucgccgccca cguggugucu gaggccaaca gcaacgccgc 1560cucugugcug
cagugggcca agaaaggcua cuacaccaug aaguccaacc ucgugaugcu
1620ggaaaacggc aagcagcuga ccgugaagcg cgagggccug uacuaugugu
acacccaagu 1680gacauucugc agcaaccgcg agcccagcag ccagaggccu
uuuaucgugg gccuguggcu 1740gaagccuagc agcggcagcg agagaauccu
gcugaaggcc gccaacaccc acagcagcuc 1800ucagcugugc gagcagcagu
cugugcaccu gggaggcgug uucgagcugc aagcuggcgc 1860uuccguguuc
gugaacguga ccgaggccag ccaagugauc cacagagugg gcuucagcag
1920cuuuggacug cucaaacugg gcggaggguc cggcggaggc ggagaugaag
auccucagau 1980ugcugcccac guggugucug aggccaacag caacgccgcc
ucugugcugc agugggccaa 2040gaaaggcuac uacaccauga aguccaaccu
cgugaugcug gaaaacggca agcagcugac 2100cgugaagcgc gagggccugu
acuaugugua cacccaagug acauucugca gcaaccgcga 2160gcccagcagc
cagaggccuu uuaucguggg ccuguggcug aagccuagca gcggcagcga
2220gagaauccug cugaaggccg ccaacaccca cagcagcucu cagcugugcg
agcagcaguc 2280ugugcaccug ggaggcgugu ucgagcugca agcuggcgcu
uccguguucg ugaacgugac 2340cgaggccagc caagugaucc acagaguggg
cuucagcagc uuuggacugc ucaaacuggg 2400aggcggcucc ggaggcggag
gagaugaaga uccucagauu gcugcccacg uggugucuga 2460ggccaacagc
aacgccgccu cugugcugca gugggccaag aaaggcuacu acaccaugaa
2520guccaaccuc gugaugcugg aaaacggcaa gcagcugacc gugaagcgcg
agggccugua 2580cuauguguac acccaaguga cauucugcag caaccgcgag
cccagcagcc agaggccuuu 2640uaucgugggc cuguggcuga agccuagcag
cggcagcgag agaauccugc ugaaggccgc 2700caacacccac agcagcucuc
agcugugcga gcagcagucu gugcaccugg gaggcguguu 2760cgagcugcaa
gcuggcgcuu ccguguucgu gaacgugacc gaggccagcc aagugaucca
2820cagagugggc uucuccuccu ucggccuccu gaagcuguga cucgagagcu
cgcuuucuug 2880cuguccaauu ucuauuaaag guuccuuugu ucccuaaguc
caacuacuaa acugggggau 2940auuaugaagg gccuugagca ucuggauucu
gccuaauaaa aaacauuuau uuucauugcu 3000gcgucgagag cucgcuuucu
ugcuguccaa uuucuauuaa agguuccuuu guucccuaag 3060uccaacuacu
aaacuggggg auauuaugaa gggccuugag caucuggauu cugccuaaua
3120aaaaacauuu auuuucauug cugcgucgag accuggucca gagucgcuag
caaaaaaaaa 3180aaaaaaaaaa aaaaaaaaaa agcauaugac uaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 3240aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa a 328175935PRTArtificial sequenceModB murine CD27L-CD40L
75Met Gly Ala Met Ala Pro Arg Thr Leu Leu Leu Leu Leu Ala Ala Ala1
5 10 15Leu Ala Pro Thr Gln Thr Arg Ala Gly Pro Gly Ser His Pro Glu
Pro 20 25 30His Thr Ala Glu Leu Gln Leu Asn Leu Thr Val Pro Arg Lys
Asp Pro 35 40 45Thr Leu Arg Trp Gly Ala Gly Pro Ala Leu Gly Arg Ser
Phe Thr His 50 55 60Gly Pro Glu Leu Glu Glu Gly His Leu Arg Ile His
Gln Asp Gly Leu65 70 75 80Tyr Arg Leu His Ile Gln Val Thr Leu Ala
Asn Cys Ser Ser Pro Gly 85 90 95Ser Thr Leu Gln His Arg Ala Thr Leu
Ala Val Gly Ile Cys Ser Pro 100 105 110Ala Ala His Gly Ile Ser Leu
Leu Arg Gly Arg Phe Gly Gln Asp Cys 115 120 125Thr Val Ala Leu Gln
Arg Leu Thr Tyr Leu Val His Gly Asp Val Leu 130 135 140Cys Thr Asn
Leu Thr Leu Pro Leu Leu Pro Ser Arg Asn Ala Asp Glu145 150 155
160Thr Phe Phe Gly Val Gln Trp Ile Cys Pro Gly Gly Gly Ser Gly Gly
165 170 175Gly His Pro Glu Pro His Thr Ala Glu Leu Gln Leu Asn Leu
Thr Val 180 185 190Pro Arg Lys Asp Pro Thr Leu Arg Trp Gly Ala Gly
Pro Ala Leu Gly 195 200 205Arg Ser Phe Thr His Gly Pro Glu Leu Glu
Glu Gly His Leu Arg Ile 210 215 220His Gln Asp Gly Leu Tyr Arg Leu
His Ile Gln Val Thr Leu Ala Asn225 230 235 240Cys Ser Ser Pro Gly
Ser Thr Leu Gln His Arg Ala Thr Leu Ala Val 245 250 255Gly Ile Cys
Ser Pro Ala Ala His Gly Ile Ser Leu Leu Arg Gly Arg 260 265 270Phe
Gly Gln Asp Cys Thr Val Ala Leu Gln Arg Leu Thr Tyr Leu Val 275 280
285His Gly Asp Val Leu Cys Thr Asn Leu Thr Leu Pro Leu Leu Pro Ser
290 295 300Arg Asn Ala Asp Glu Thr Phe Phe Gly Val Gln Trp Ile Cys
Pro Gly305 310 315 320Gly Gly Ser Gly Gly Gly His Pro Glu Pro His
Thr Ala Glu Leu Gln 325 330 335Leu Asn Leu Thr Val Pro Arg Lys Asp
Pro Thr Leu Arg Trp Gly Ala 340 345 350Gly Pro Ala Leu Gly Arg Ser
Phe Thr His Gly Pro Glu Leu Glu Glu 355 360 365Gly His Leu Arg Ile
His Gln Asp Gly Leu Tyr Arg Leu His Ile Gln 370 375 380Val Thr Leu
Ala Asn Cys Ser Ser Pro Gly Ser Thr Leu Gln His Arg385 390 395
400Ala Thr Leu Ala Val Gly Ile Cys Ser Pro Ala Ala His Gly Ile Ser
405 410 415Leu Leu Arg Gly Arg Phe Gly Gln Asp Cys Thr Val Ala Leu
Gln Arg 420 425 430Leu Thr Tyr Leu Val His Gly Asp Val Leu Cys Thr
Asn Leu Thr Leu 435 440 445Pro Leu Leu Pro Ser Arg Asn Ala Asp Glu
Thr Phe Phe Gly Val Gln 450 455 460Trp Ile Cys Pro Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly Gly465 470 475 480Gly Gly Ser Gly Asp
Glu Asp Pro Gln Ile Ala Ala His Val Val Ser 485 490 495Glu Ala Asn
Ser Asn Ala Ala Ser Val Leu Gln Trp Ala Lys Lys Gly 500 505 510Tyr
Tyr Thr Met Lys Ser Asn Leu Val Met Leu Glu Asn Gly Lys Gln 515 520
525Leu Thr Val Lys Arg Glu Gly Leu Tyr Tyr Val Tyr Thr Gln Val Thr
530 535 540Phe Cys Ser Asn Arg Glu Pro Ser Ser Gln Arg Pro Phe Ile
Val Gly545 550 555 560Leu Trp Leu Lys Pro Ser Ser Gly Ser Glu Arg
Ile Leu Leu Lys Ala 565 570 575Ala Asn Thr His Ser Ser Ser Gln Leu
Cys Glu Gln Gln Ser Val His 580 585 590Leu Gly Gly Val Phe Glu Leu
Gln Ala Gly Ala Ser Val Phe Val Asn 595 600 605Val Thr Glu Ala Ser
Gln Val Ile His Arg Val Gly Phe Ser Ser Phe 610 615 620Gly Leu Leu
Lys Leu Gly Gly Gly Ser Gly Gly Gly Gly Asp Glu Asp625 630 635
640Pro Gln Ile Ala Ala His Val Val Ser Glu Ala Asn Ser Asn Ala Ala
645 650 655Ser Val Leu Gln Trp Ala Lys Lys Gly Tyr Tyr Thr Met Lys
Ser Asn 660 665 670Leu Val Met Leu Glu Asn Gly Lys Gln Leu Thr Val
Lys Arg Glu Gly 675 680 685Leu Tyr Tyr Val Tyr Thr Gln Val Thr Phe
Cys Ser Asn Arg Glu Pro 690 695 700Ser Ser Gln Arg Pro Phe Ile Val
Gly Leu Trp Leu Lys Pro Ser Ser705 710 715 720Gly Ser Glu Arg Ile
Leu Leu Lys Ala Ala Asn Thr His Ser Ser Ser 725 730 735Gln Leu Cys
Glu Gln Gln Ser Val His Leu Gly Gly Val Phe Glu Leu 740 745 750Gln
Ala Gly Ala Ser Val Phe Val Asn Val Thr Glu Ala Ser Gln Val 755 760
765Ile His Arg Val Gly Phe Ser Ser Phe Gly Leu Leu Lys Leu Gly Gly
770 775 780Gly Ser Gly Gly Gly Gly Asp Glu Asp Pro Gln Ile Ala Ala
His Val785 790 795 800Val Ser Glu Ala Asn Ser Asn Ala Ala Ser Val
Leu Gln Trp Ala Lys 805 810 815Lys Gly Tyr Tyr Thr Met Lys Ser Asn
Leu Val Met Leu Glu Asn Gly 820 825 830Lys Gln Leu Thr Val Lys Arg
Glu Gly Leu Tyr Tyr Val Tyr Thr Gln 835 840 845Val Thr Phe Cys Ser
Asn Arg Glu Pro Ser Ser Gln Arg Pro Phe Ile 850 855 860Val Gly Leu
Trp Leu Lys Pro Ser Ser Gly Ser Glu Arg Ile Leu Leu865 870 875
880Lys Ala Ala Asn Thr His Ser Ser Ser Gln Leu Cys Glu Gln Gln Ser
885 890 895Val His Leu Gly Gly Val Phe Glu Leu Gln Ala Gly Ala Ser
Val Phe 900 905 910Val Asn Val Thr Glu Ala Ser Gln Val Ile His Arg
Val Gly Phe Ser 915 920 925Ser Phe Gly Leu Leu Lys Leu 930
935763361DNAArtificial sequenceModB murine CD27L-CD40L
(5'UTR-CDS-3'UTR) 76ggaataaact agtctcaaca caacatatac aaaacaaacg
aatctcaagc aatcaagcat 60tctacttcta ttgcagcaat ttaaatcatt tcttttaaag
caaaagcaat tttctgaaaa 120ttttcaccat ttacgaacga tagccatggg
cgccatggcc cctagaacat tgctcctgct 180gctggccgct gccctggccc
ctacacagac aagagctgga cctggatccc accccgagcc 240ccacaccgcc
gaactgcagc tgaacctgac cgtgcccaga aaggacccca ccctgagatg
300gggagctggc cctgctctgg gcagatcctt tacacacggc cccgagctgg
aagaaggcca 360cctgagaatc caccaggacg gcctgtacag actgcacatc
caagtgaccc tggccaactg 420cagcagccct ggctctaccc tgcagcacag
agccacactg gccgtgggca tctgtagccc 480tgctgctcac ggaatcagcc
tgctgagagg cagattcggc caggactgta ccgtggccct 540gcagaggctg
acctatctgg tgcatggcga cgtgctgtgc accaacctga cactgcctct
600gctgcccagc agaaacgccg acgaaacatt ctttggagtg cagtggattt
gtcctggcgg 660agggtccggg ggaggacacc cagaacctca tacagctgaa
ctgcagctga acctgaccgt 720gcccagaaag gaccccaccc tgagatgggg
agctggccct gctctgggca gatcctttac 780acacggcccc gagctggaag
aaggccacct gagaatccac caggacggcc tgtacagact 840gcacatccaa
gtgaccctgg ccaactgcag cagccctggc tctaccctgc agcacagagc
900cacactggcc gtgggcatct gtagccctgc tgctcacgga atcagcctgc
tgagaggcag 960attcggccag gactgtaccg tggccctgca gaggctgacc
tatctggtgc atggcgacgt 1020gctgtgcacc aacctgacac tgcctctgct
gcccagcaga aacgccgacg aaacattctt 1080tggagtgcag tggatttgtc
ctgggggagg ctccggaggc ggacaccctg aacctcatac 1140agctgaactg
cagctgaacc tgaccgtgcc cagaaaggac cccaccctga gatggggagc
1200tggccctgct ctgggcagat cctttacaca cggccccgag ctggaagaag
gccacctgag 1260aatccaccag gacggcctgt acagactgca catccaagtg
accctggcca actgcagcag 1320ccctggctct accctgcagc acagagccac
actggccgtg ggcatctgta gccctgctgc 1380tcacggaatc agcctgctga
gaggcagatt cggccaggac tgtaccgtgg ccctgcagag 1440gctgacctat
ctggtgcatg gcgacgtgct gtgcaccaac ctgacactgc ctctgctgcc
1500cagcagaaac gccgacgaga ccttcttcgg cgtccagtgg atctgccccg
gaggcggtgg 1560tagtggaggt ggcgggtccg gtggaggtgg aagcggcgac
gaggaccccc agatcgccgc 1620ccacgtggtg tctgaggcca acagcaacgc
cgcctctgtg ctgcagtggg ccaagaaagg 1680ctactacacc atgaagtcca
acctcgtgat gctggaaaac ggcaagcagc tgaccgtgaa 1740gcgcgagggc
ctgtactatg tgtacaccca agtgacattc tgcagcaacc gcgagcccag
1800cagccagagg ccttttatcg tgggcctgtg gctgaagcct agcagcggca
gcgagagaat 1860cctgctgaag gccgccaaca cccacagcag ctctcagctg
tgcgagcagc agtctgtgca 1920cctgggaggc gtgttcgagc tgcaagctgg
cgcttccgtg ttcgtgaacg tgaccgaggc 1980cagccaagtg atccacagag
tgggcttcag cagctttgga ctgctcaaac tgggcggagg 2040gtccggcgga
ggcggagatg aagatcctca gattgctgcc cacgtggtgt ctgaggccaa
2100cagcaacgcc gcctctgtgc tgcagtgggc caagaaaggc tactacacca
tgaagtccaa 2160cctcgtgatg ctggaaaacg gcaagcagct gaccgtgaag
cgcgagggcc tgtactatgt 2220gtacacccaa gtgacattct gcagcaaccg
cgagcccagc agccagaggc cttttatcgt 2280gggcctgtgg ctgaagccta
gcagcggcag cgagagaatc ctgctgaagg ccgccaacac 2340ccacagcagc
tctcagctgt gcgagcagca gtctgtgcac ctgggaggcg tgttcgagct
2400gcaagctggc gcttccgtgt tcgtgaacgt gaccgaggcc agccaagtga
tccacagagt 2460gggcttcagc agctttggac tgctcaaact gggaggcggc
tccggaggcg gaggagatga 2520agatcctcag attgctgccc acgtggtgtc
tgaggccaac agcaacgccg cctctgtgct 2580gcagtgggcc aagaaaggct
actacaccat gaagtccaac ctcgtgatgc tggaaaacgg 2640caagcagctg
accgtgaagc gcgagggcct gtactatgtg tacacccaag tgacattctg
2700cagcaaccgc gagcccagca gccagaggcc ttttatcgtg ggcctgtggc
tgaagcctag 2760cagcggcagc gagagaatcc tgctgaaggc cgccaacacc
cacagcagct ctcagctgtg 2820cgagcagcag tctgtgcacc tgggaggcgt
gttcgagctg caagctggcg cttccgtgtt 2880cgtgaacgtg accgaggcca
gccaagtgat ccacagagtg ggcttctcct ccttcggcct 2940cctgaagctg
tgactcgacg tcctggtact gcatgcacgc aatgctagct gcccctttcc
3000cgtcctgggt accccgagtc tcccccgacc tcgggtccca ggtatgctcc
cacctccacc 3060tgccccactc accacctctg ctagttccag acacctccca
agcacgcagc aatgcagctc 3120aaaacgctta gcctagccac acccccacgg
gaaacagcag tgattaacct ttagcaataa 3180acgaaagttt aactaagcta
tactaacccc agggttggtc aatttcgtgc cagccacacc
3240ctcgagctag caaaaaaaaa aaaaaaaaaa aaaaaaaaaa agcatatgac
taaaaaaaaa 3300aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa 3360a 3361773361RNAArtificial sequenceModB
murine CD27L-CD40L 77ggaauaaacu agucucaaca caacauauac aaaacaaacg
aaucucaagc aaucaagcau 60ucuacuucua uugcagcaau uuaaaucauu ucuuuuaaag
caaaagcaau uuucugaaaa 120uuuucaccau uuacgaacga uagccauggg
cgccauggcc ccuagaacau ugcuccugcu 180gcuggccgcu gcccuggccc
cuacacagac aagagcugga ccuggauccc accccgagcc 240ccacaccgcc
gaacugcagc ugaaccugac cgugcccaga aaggacccca cccugagaug
300gggagcuggc ccugcucugg gcagauccuu uacacacggc cccgagcugg
aagaaggcca 360ccugagaauc caccaggacg gccuguacag acugcacauc
caagugaccc uggccaacug 420cagcagcccu ggcucuaccc ugcagcacag
agccacacug gccgugggca ucuguagccc 480ugcugcucac ggaaucagcc
ugcugagagg cagauucggc caggacugua ccguggcccu 540gcagaggcug
accuaucugg ugcauggcga cgugcugugc accaaccuga cacugccucu
600gcugcccagc agaaacgccg acgaaacauu cuuuggagug caguggauuu
guccuggcgg 660aggguccggg ggaggacacc cagaaccuca uacagcugaa
cugcagcuga accugaccgu 720gcccagaaag gaccccaccc ugagaugggg
agcuggcccu gcucugggca gauccuuuac 780acacggcccc gagcuggaag
aaggccaccu gagaauccac caggacggcc uguacagacu 840gcacauccaa
gugacccugg ccaacugcag cagcccuggc ucuacccugc agcacagagc
900cacacuggcc gugggcaucu guagcccugc ugcucacgga aucagccugc
ugagaggcag 960auucggccag gacuguaccg uggcccugca gaggcugacc
uaucuggugc auggcgacgu 1020gcugugcacc aaccugacac ugccucugcu
gcccagcaga aacgccgacg aaacauucuu 1080uggagugcag uggauuuguc
cugggggagg cuccggaggc ggacacccug aaccucauac 1140agcugaacug
cagcugaacc ugaccgugcc cagaaaggac cccacccuga gauggggagc
1200uggcccugcu cugggcagau ccuuuacaca cggccccgag cuggaagaag
gccaccugag 1260aauccaccag gacggccugu acagacugca cauccaagug
acccuggcca acugcagcag 1320cccuggcucu acccugcagc acagagccac
acuggccgug ggcaucugua gcccugcugc 1380ucacggaauc agccugcuga
gaggcagauu cggccaggac uguaccgugg cccugcagag 1440gcugaccuau
cuggugcaug gcgacgugcu gugcaccaac cugacacugc cucugcugcc
1500cagcagaaac gccgacgaga ccuucuucgg cguccagugg aucugccccg
gaggcggugg 1560uaguggaggu ggcggguccg guggaggugg aagcggcgac
gaggaccccc agaucgccgc 1620ccacguggug ucugaggcca acagcaacgc
cgccucugug cugcaguggg ccaagaaagg 1680cuacuacacc augaagucca
accucgugau gcuggaaaac ggcaagcagc ugaccgugaa 1740gcgcgagggc
cuguacuaug uguacaccca agugacauuc ugcagcaacc gcgagcccag
1800cagccagagg ccuuuuaucg ugggccugug gcugaagccu agcagcggca
gcgagagaau 1860ccugcugaag gccgccaaca cccacagcag cucucagcug
ugcgagcagc agucugugca 1920ccugggaggc guguucgagc ugcaagcugg
cgcuuccgug uucgugaacg ugaccgaggc 1980cagccaagug auccacagag
ugggcuucag cagcuuugga cugcucaaac ugggcggagg 2040guccggcgga
ggcggagaug aagauccuca gauugcugcc cacguggugu cugaggccaa
2100cagcaacgcc gccucugugc ugcagugggc caagaaaggc uacuacacca
ugaaguccaa 2160ccucgugaug cuggaaaacg gcaagcagcu gaccgugaag
cgcgagggcc uguacuaugu 2220guacacccaa gugacauucu gcagcaaccg
cgagcccagc agccagaggc cuuuuaucgu 2280gggccugugg cugaagccua
gcagcggcag cgagagaauc cugcugaagg ccgccaacac 2340ccacagcagc
ucucagcugu gcgagcagca gucugugcac cugggaggcg uguucgagcu
2400gcaagcuggc gcuuccgugu ucgugaacgu gaccgaggcc agccaaguga
uccacagagu 2460gggcuucagc agcuuuggac ugcucaaacu gggaggcggc
uccggaggcg gaggagauga 2520agauccucag auugcugccc acgugguguc
ugaggccaac agcaacgccg ccucugugcu 2580gcagugggcc aagaaaggcu
acuacaccau gaaguccaac cucgugaugc uggaaaacgg 2640caagcagcug
accgugaagc gcgagggccu guacuaugug uacacccaag ugacauucug
2700cagcaaccgc gagcccagca gccagaggcc uuuuaucgug ggccuguggc
ugaagccuag 2760cagcggcagc gagagaaucc ugcugaaggc cgccaacacc
cacagcagcu cucagcugug 2820cgagcagcag ucugugcacc ugggaggcgu
guucgagcug caagcuggcg cuuccguguu 2880cgugaacgug accgaggcca
gccaagugau ccacagagug ggcuucuccu ccuucggccu 2940ccugaagcug
ugacucgacg uccugguacu gcaugcacgc aaugcuagcu gccccuuucc
3000cguccugggu accccgaguc ucccccgacc ucggguccca gguaugcucc
caccuccacc 3060ugccccacuc accaccucug cuaguuccag acaccuccca
agcacgcagc aaugcagcuc 3120aaaacgcuua gccuagccac acccccacgg
gaaacagcag ugauuaaccu uuagcaauaa 3180acgaaaguuu aacuaagcua
uacuaacccc aggguugguc aauuucgugc cagccacacc 3240cucgagcuag
caaaaaaaaa aaaaaaaaaa aaaaaaaaaa agcauaugac uaaaaaaaaa
3300aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
aaaaaaaaaa 3360a 336178110RNAArtificial sequencePoly-A 78aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa gcauaugacu aaaaaaaaaa aaaaaaaaaa 60aaaaaaaaaa
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 11079444PRTArtificial
sequenceAnti-PD1 Mab heavy chain 79Glu Val Gln Leu Leu Glu Ser Gly
Gly Val Leu Val Gln Pro Gly Gly1 5 10 15Ser Leu Arg Leu Ser Cys Ala
Ala Ser Gly Phe Thr Phe Ser Asn Phe 20 25 30Gly Met Thr Trp Val Arg
Gln Ala Pro Gly Lys Gly Leu Glu Trp Val 35 40 45Ser Gly Ile Ser Gly
Gly Gly Arg Asp Thr Tyr Phe Ala Asp Ser Val 50 55 60Lys Gly Arg Phe
Thr Ile Ser Arg Asp Asn Ser Lys Asn Thr Leu Tyr65 70 75 80Leu Gln
Met Asn Ser Leu Lys Gly Glu Asp Thr Ala Val Tyr Tyr Cys 85 90 95Val
Lys Trp Gly Asn Ile Tyr Phe Asp Tyr Trp Gly Gln Gly Thr Leu 100 105
110Val Thr Val Ser Ser Ala Ser Thr Lys Gly Pro Ser Val Phe Pro Leu
115 120 125Ala Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr Ala Ala Leu
Gly Cys 130 135 140Leu Val Lys Asp Tyr Phe Pro Glu Pro Val Thr Val
Ser Trp Asn Ser145 150 155 160Gly Ala Leu Thr Ser Gly Val His Thr
Phe Pro Ala Val Leu Gln Ser 165 170 175Ser Gly Leu Tyr Ser Leu Ser
Ser Val Val Thr Val Pro Ser Ser Ser 180 185 190Leu Gly Thr Lys Thr
Tyr Thr Cys Asn Val Asp His Lys Pro Ser Asn 195 200 205Thr Lys Val
Asp Lys Arg Val Glu Ser Lys Tyr Gly Pro Pro Cys Pro 210 215 220Pro
Cys Pro Ala Pro Glu Phe Leu Gly Gly Pro Ser Val Phe Leu Phe225 230
235 240Pro Pro Lys Pro Lys Asp Thr Leu Met Ile Ser Arg Thr Pro Glu
Val 245 250 255Thr Cys Val Val Val Asp Val Ser Gln Glu Asp Pro Glu
Val Gln Phe 260 265 270Asn Trp Tyr Val Asp Gly Val Glu Val His Asn
Ala Lys Thr Lys Pro 275 280 285Arg Glu Glu Gln Phe Asn Ser Thr Tyr
Arg Val Val Ser Val Leu Thr 290 295 300Val Leu His Gln Asp Trp Leu
Asn Gly Lys Glu Tyr Lys Cys Lys Val305 310 315 320Ser Asn Lys Gly
Leu Pro Ser Ser Ile Glu Lys Thr Ile Ser Lys Ala 325 330 335Lys Gly
Gln Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro Pro Ser Gln 340 345
350Glu Glu Met Thr Lys Asn Gln Val Ser Leu Thr Cys Leu Val Lys Gly
355 360 365Phe Tyr Pro Ser Asp Ile Ala Val Glu Trp Glu Ser Asn Gly
Gln Pro 370 375 380Glu Asn Asn Tyr Lys Thr Thr Pro Pro Val Leu Asp
Ser Asp Gly Ser385 390 395 400Phe Phe Leu Tyr Ser Arg Leu Thr Val
Asp Lys Ser Arg Trp Gln Glu 405 410 415Gly Asn Val Phe Ser Cys Ser
Val Met His Glu Ala Leu His Asn His 420 425 430Tyr Thr Gln Lys Ser
Leu Ser Leu Ser Leu Gly Lys 435 44080214PRTArtificial
sequenceAnti-PD1 Mab light chain 80Asp Ile Gln Met Thr Gln Ser Pro
Ser Ser Leu Ser Ala Ser Val Gly1 5 10 15Asp Ser Ile Thr Ile Thr Cys
Arg Ala Ser Leu Ser Ile Asn Thr Phe 20 25 30Leu Asn Trp Tyr Gln Gln
Lys Pro Gly Lys Ala Pro Asn Leu Leu Ile 35 40 45Tyr Ala Ala Ser Ser
Leu His Gly Gly Val Pro Ser Arg Phe Ser Gly 50 55 60Ser Gly Ser Gly
Thr Asp Phe Thr Leu Thr Ile Arg Thr Leu Gln Pro65 70 75 80Glu Asp
Phe Ala Thr Tyr Tyr Cys Gln Gln Ser Ser Asn Thr Pro Phe 85 90 95Thr
Phe Gly Pro Gly Thr Val Val Asp Phe Arg Arg Thr Val Ala Ala 100 105
110Pro Ser Val Phe Ile Phe Pro Pro Ser Asp Glu Gln Leu Lys Ser Gly
115 120 125Thr Ala Ser Val Val Cys Leu Leu Asn Asn Phe Tyr Pro Arg
Glu Ala 130 135 140Lys Val Gln Trp Lys Val Asp Asn Ala Leu Gln Ser
Gly Asn Ser Gln145 150 155 160Glu Ser Val Thr Glu Gln Asp Ser Lys
Asp Ser Thr Tyr Ser Leu Ser 165 170 175Ser Thr Leu Thr Leu Ser Lys
Ala Asp Tyr Glu Lys His Lys Val Tyr 180 185 190Ala Cys Glu Val Thr
His Gln Gly Leu Ser Ser Pro Val Thr Lys Ser 195 200 205Phe Asn Arg
Gly Glu Cys 210818PRTArtificial sequenceHCDR1 81Gly Phe Thr Phe Ser
Asn Phe Gly1 5828PRTArtificial sequenceHCDR2 82Ile Ser Gly Gly Gly
Arg Asp Thr1 58310PRTArtificial sequenceHCDR3 83Val Lys Trp Gly Asn
Ile Tyr Phe Asp Tyr1 5 10846PRTArtificial sequenceLCDR1 84Leu Ser
Ile Asn Thr Phe1 5853PRTArtificial sequenceLCDR2 85Ala Ala
Ser1869PRTArtificial sequenceLCDR3 86Gln Gln Ser Ser Asn Thr Pro
Phe Thr1 587117PRTArtificial sequenceAnti-PD1 Mab VH 87Glu Val Gln
Leu Leu Glu Ser Gly Gly Val Leu Val Gln Pro Gly Gly1 5 10 15Ser Leu
Arg Leu Ser Cys Ala Ala Ser Gly Phe Thr Phe Ser Asn Phe 20 25 30Gly
Met Thr Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu Trp Val 35 40
45Ser Gly Ile Ser Gly Gly Gly Arg Asp Thr Tyr Phe Ala Asp Ser Val
50 55 60Lys Gly Arg Phe Thr Ile Ser Arg Asp Asn Ser Lys Asn Thr Leu
Tyr65 70 75 80Leu Gln Met Asn Ser Leu Lys Gly Glu Asp Thr Ala Val
Tyr Tyr Cys 85 90 95Val Lys Trp Gly Asn Ile Tyr Phe Asp Tyr Trp Gly
Gln Gly Thr Leu 100 105 110Val Thr Val Ser Ser
11588107PRTArtificial sequenceAnti-PD1 Mab VL 88Asp Ile Gln Met Thr
Gln Ser Pro Ser Ser Leu Ser Ala Ser Val Gly1 5 10 15Asp Ser Ile Thr
Ile Thr Cys Arg Ala Ser Leu Ser Ile Asn Thr Phe 20 25 30Leu Asn Trp
Tyr Gln Gln Lys Pro Gly Lys Ala Pro Asn Leu Leu Ile 35 40 45Tyr Ala
Ala Ser Ser Leu His Gly Gly Val Pro Ser Arg Phe Ser Gly 50 55 60Ser
Gly Ser Gly Thr Asp Phe Thr Leu Thr Ile Arg Thr Leu Gln Pro65 70 75
80Glu Asp Phe Ala Thr Tyr Tyr Cys Gln Gln Ser Ser Asn Thr Pro Phe
85 90 95Thr Phe Gly Pro Gly Thr Val Val Asp Phe Arg 100 105
* * * * *