U.S. patent application number 16/666214 was filed with the patent office on 2020-04-30 for respiratory syncytial virus (rsv) polyanhydride nanoparticle vaccine.
This patent application is currently assigned to University of Iowa Research Foundation. The applicant listed for this patent is University of Iowa Research Foundation. Invention is credited to Kevin L. Legge, Steven M. Varga.
Application Number | 20200129446 16/666214 |
Document ID | / |
Family ID | 70327551 |
Filed Date | 2020-04-30 |
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United States Patent
Application |
20200129446 |
Kind Code |
A1 |
Varga; Steven M. ; et
al. |
April 30, 2020 |
RESPIRATORY SYNCYTIAL VIRUS (RSV) POLYANHYDRIDE NANOPARTICLE
VACCINE
Abstract
Disclosed are compositions and methods for vaccinating
susceptible individuals against infection by respiratory syncytial
virus (RSV). The disclosed compositions include vaccine
compositions comprising an effective amount of respiratory
syncytial virus (RSV) F protein in a pre-fusion stabilized form
and/or M protein incorporated into biodegradable polyanhydride
polymer particles for inducing an immune response against RSV. The
vaccine compositions also may include a suitable adjuvant.
Inventors: |
Varga; Steven M.;
(Coralville, IA) ; Legge; Kevin L.; (North
Liberty, IA) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
University of Iowa Research Foundation |
Iowa City |
IA |
US |
|
|
Assignee: |
University of Iowa Research
Foundation
Iowa City
IA
|
Family ID: |
70327551 |
Appl. No.: |
16/666214 |
Filed: |
October 28, 2019 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
|
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62752006 |
Oct 29, 2018 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
A61P 31/14 20180101;
A61K 2039/55561 20130101; A61K 9/5146 20130101; A61K 39/39
20130101; C12N 7/00 20130101; C12N 2760/18534 20130101; A61K 39/155
20130101 |
International
Class: |
A61K 9/51 20060101
A61K009/51; A61K 39/155 20060101 A61K039/155; C12N 7/00 20060101
C12N007/00; A61K 39/39 20060101 A61K039/39; A61P 31/14 20060101
A61P031/14 |
Goverment Interests
STATEMENT REGARDING FEDERALLY SPONSORED RESEARCH OR DEVELOPMENT
[0002] This invention was made with government support under
AI124093 awarded by the National Institutes of Health. The
government has certain rights in the invention.
Claims
1. A vaccine composition comprising an effective amount of
respiratory syncytial virus (RSV) F protein in a pre-fusion
stabilized form and/or M protein incorporated into biodegradable
polyanhydride polymer particles for inducing an immune response
against RSV.
2. The vaccine composition of claim 1, comprising an effective
amount of RSV F protein in the pre-fusion stabilized form
incorporated into the biodegradable polyanhydride polymer particles
for inducing an immune response against RSV.
3. The vaccine composition of claim 1, wherein the F protein in a
pre-fusion stabilized form is selected from the group consisting of
DS-Cav1, DS-TriC, Vav-1-TriC, DX-Cav1-TriC, Pre-F-GCN4t, SC-DM, and
SC-TM.
4. The vaccine composition of claim 1, wherein the F protein in a
pre-fusion stabilized form is DS-Cav1.
5. The vaccine composition of claim 1, comprising an effective
amount of RSV M protein incorporated into the biodegradable
polyanhydride polymer particles for inducing an immune response
against RSV.
6. The vaccine composition of claim 1, further comprising an
adjuvant.
7. The vaccine composition of claim 6, wherein the adjuvant is
incorporated into the biodegradable polyanhydride polymer
particles.
8. The vaccine composition of claim 1, further comprising a CpG
oligonucleotide.
9. The vaccine composition of claim 8, wherein the CpG
oligonucleotide is incorporated into the biodegradable
polyanhydride polymer particles.
10. The vaccine composition of claim 8, wherein the CpG
oligonucleotide is a CpG oligodeoxynucleotide (ODN).
11. The vaccine composition of claim 10, wherein the CpG
oligonucleotide is incorporated into the biodegradable
polyanhydride polymer particles.
12. The vaccine composition of claim 1, wherein the biodegradable
polyanhydride polymer particles have an average effective diameter
of less than about 5 .mu.M.
13. The vaccine composition of claim 1, wherein the vaccine
composition induces an antibody response as well as a CD4 T cell
response when administered to a subject in need thereof.
14. The vaccine composition of claim 1, wherein the biodegradable
polyanhydride polymer particles comprise a polymer formed from a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)alkane, a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)dioxa-alkane, and
a (C.sub.5-C.sub.20)alkanoic diacid.
15. The vaccine composition of claim 1, wherein the biodegradable
polyanhydride polymer particles comprise a polymer formed from
1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA).
16. The vaccine composition of claim 1, wherein the biodegradable
polyanhydride polymer particles comprise a polymer formed from
1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA), wherein the polymer is formed from CPH and CPTEG at a
ratio range of CPH:CPTEG of 80-60:20-40.
17. The vaccine composition of claim 1, further comprising an RSV
protein selected from NS1, NS2, N, P, SH, G, M2-1, M2-2, L, or any
combinations thereof.
18. A method comprising administering the vaccine of claim 1 to a
subject who is at risk for infection by RSV.
19. The method of claim 18, wherein after the vaccine composition
is administered to the subject, the subject is protected against
infection by RSV.
20. The method of claim 18, wherein the vaccine composition is
administered by a route selected from intranasal, pulmonary, oral,
subcutaneous, intramuscular, or intravenous.
Description
CROSS-REFERENCE TO RELATED PATENT APPLICATIONS
[0001] The present application claims the benefit of priority under
35 U.S.C. .sctn. 119(e) to U.S. Provisional Application No.
62/752,006, filed on Oct. 29, 2018, the content of which is
incorporated herein by reference in its entirety.
BACKGROUND
[0003] The field of the invention relates to compositions and
methods for inducing an immune response against respiratory
syncytial virus (RSV). In particular, the field of the invention
relates to compositions and methods for vaccinating susceptible
individuals against infection by RSV by administering particulate
vaccines comprising RSV structural components or variants thereof
and optionally an adjuvant.
[0004] Respiratory syncytial virus (RSV) is the leading cause of
lower respiratory infections in young children, resulting in 34
million new RSV infections each year, and approximately 125,000
hospitalizations annually in the United States alone. RSV
reinfection is common in children, and even adults can be
susceptible to repeated infection due to short-lived and incomplete
protective immunity after natural infection. Especially vulnerable
populations include premature babies, the elderly, people with
heart or lung disease, and people with a very weak immune system.
There are no effective vaccines for RSV, and work in the field has
been slow since two children died during an RSV vaccine test in
1966.
[0005] RSV is an RNA virus with a genome that expresses eleven (11)
known proteins. One of these, F protein, causes the virion membrane
to fuse with the target cell's membrane. F proteins are targeted by
antibodies after infection and are the major target for antiviral
drug development. Fusion causes a confirmation change that obscures
the major F antigenic site, site 0. As such, RSV vaccines that
induce immune response against 0 and other antigens of RSV such as
M protein are desirable.
SUMMARY
[0006] Disclosed are compositions and methods for vaccinating
susceptible individuals against infection by respiratory syncytial
virus (RSV). The disclosed compositions include vaccine
compositions comprising an effective amount of respiratory
syncytial virus (RSV) F protein in a pre-fusion stabilized form
and/or M protein incorporated into biodegradable polyanhydride
polymer particles for inducing an immune response against RSV. The
vaccine compositions also may include a suitable adjuvant.
BRIEF DESCRIPTION OF THE FIGURES
[0007] FIG. 1. Prime/boost nanoparticle vaccination strategy with
prefusion RSV F protects against RSV-induced disease. BALB/c mice
were primed with 500 .mu.g of the indicated nanoparticle
formulation i.n. on day 0, and boosted with 500 .mu.g i.n. on day
28. Control mice (labeled RSV) were administered PBS i.n. on both
prime and boost days. On day 56, all mice were challenged with
4.8.times.10.sup.6 PFU RSV-A2 i.n. and assessed for (A) weight
loss, (B) Penh, and (C) EF50. Data are represented as mean.+-.SEM
of 3 independent experiments (n=1 mice for prefusionF+M+CpG, n=12
mice for RSV, CpG, M+CpG, and postfusion F+CpG, n=10 mice for
prefusion F+CpG). Asterisks represent significance between RSV and
prefusion F+M+CpG, pound symbols represent significance between RSV
and prefusion F+CpG, and $ represents significance between RSV and
postfusion F+CpG as determined by a 2-way ANOVA with a Dunnett's
post hoc test. .sup.*/#/.dagger-dbl.p<0.05,
.sup.**/##/.dagger-dbl..dagger-dbl.p<0.01,
.sup.***/###/.dagger-dbl..dagger-dbl..dagger-dbl.p<0.001
[0008] FIG. 2. Prime/boost nanoparticle vaccination with prefusion
RSV F reduces RSV N gene viral copy numbers. BALB/c mice were
primed with 500 .mu.g of the indicated nanoparticle formulation
i.n. on day 0, and boosted with 500 .mu.g i.n. on day 28. Control
mice (labeled RSV) were administered PBS i.n. on both prime and
boost days. On day 56, all mice were challenged with
4.8.times.10.sup.6 PFU RSV-A2 i.n. 4 days post-challenge lungs were
harvested for RNA. RT-PCR was performed to determine RSV N gene
copy numbers. Data represent mean.+-.SEM of 2 independent
experiments (n=8 mice for postfusion F+CpG, M+CpG, and prefusion
F+CpG, n=7 mice for RSV, n=6 mice for prefusion F+M+CpG, n=4 mice
for CpG). Statistical significance was determined by a one-way
ANOVA with a Tukey's post hoc test. *p<0.05, **p<0.01
[0009] FIG. 3. Initial priming vaccination with prefusion RSV F
induces lung-resident CD4 and CD8 T cells. BALB/c mice were primed
with 500 .mu.g of the indicated nanoparticle formulation or PBS
(naive) i.n. on day 0. Lungs and spleen were harvested on day 8 and
analyzed by flow cytometry. Frequency of (A) activated
(CD11a.sup.hiCD49d.sup.+) CD4 T cells and (B) activated
(CD11a.sup.hiCD810) CD8 T cells. Number of i.v..sup.- (C) CD4 and
(D) CD8 T cells. Number of activated i.v..sup.- (E)
CD103.sup.-CD69.sup.+CD4 T cells and (F) CD103.sup.+CD69.sup.+CD8 T
cells. (G) Representative flow cytometry plots of germinal center B
cells (CD19.sup.+CDB220.sup.+Fas.sup.+GL-7.sup.+). Data are
represented as mean.+-.SEM from a single experiment (n=4 mice for
naive, preF+CpG, preF+M+CpG, n=3 mice for CpG, PreF, PreF+M).
Statistical significance was determined by a 2-way ANOVA with
Tukey's post hoc test (A and B). *p<0.05, **p<0.01,
p<0.001
[0010] FIG. 4. Prime/boost nanoparticle vaccination induces
RSV-specific antibodies in serum. BALB/c mice were primed with 500
.mu.g of the indicated nanoparticle formulation i.n. on day 0, and
boosted with 500 .mu.g i.n. on day 28. Control mice (labeled naive)
were administered PBS i.n. on both prime and boost days. On day 14
and 56 serum was assessed for (A,D) total RSV-specific IgG, (B,E)
IgG1, or (C,F) IgG2a. Data are represented as mean.+-.SEM from a
single experiment (n=4 mice). Asterisks represent significance
between naive and prefusion F+M+CpG, and .dagger-dbl. represents
significance between naive and postfusion F+CpG as determined by a
2-way ANOVA with Dunnett's post hoc test.
.sup.*/#/.dagger-dbl.p<0.05,
.sup.**/##/.dagger-dbl..dagger-dbl.p<0.01,
***/###/.dagger-dbl..dagger-dbl..dagger-dbl.p<0.001
[0011] FIG. 5. Prime/boost nanoparticle vaccination with prefusion
RSV F induces lung-resident B cells, CD4, and CD8 T cells. BALB/c
mice were primed with 500 .mu.g of the indicated nanoparticle
formulation or PBS (naive) i.n. on day 0, and boosted with 500
.mu.g i.n. on day 28. Lung and spleen were harvested on day 42 and
analyzed by flow cytometry. (A) Number of i.v..sup.- B cells.
Number of activated i.v..sup.- (B) CD103.sup.-CD69.sup.+CD4 T cells
and (C) CD103.sup.+CD69.sup.+CD8 T cells. Number of activated (D)
IFN-.gamma..sup.+CD4 T cells and (E) IL-5.sup.+CD4 T cells
following stimulation with PMA/ionomycin. Data are represented as
mean.+-.SEM from a single experiment (n=4 mice). Asterisks
represent significance between naive and prefusion F+M+CpG, and
.dagger-dbl. represents significance between naive and postfusion
F+CpG as determined by a one-way ANOVA with Tukey's post hoc test.
*p<0.05, **p<0.01, ***p<0.001.
[0012] FIG. 6. Prime/boost nanoparticle vaccination with prefusion
RSV F protects against RSV-induced weight loss and pulmonary
dysfunction. (A-B) BALB/c mice were primed with 500 .mu.g of the
indicated nanoparticle formulation i.n. on day 0, and challenged
with 4.8.times.10.sup.6 PFU RSV-A2 i.n. on day 28. No vaccine mice
were administered PBS i.n. at the prime. Groups were monitored
daily for (A) weight loss and (B) airway obstruction (Penh). (C-D)
BALB/c mice were primed with 500 .mu.g of the indicated
nanoparticle formulation i.n. on day 0, and boosted with 500 .mu.g
i.n. on day 28. No vaccine mice were administered PBS i.n. on both
prime and boost days. All mice were challenged with
4.8.times.10.sup.6 PFU RSV-A2 i.n. on (C-D) day 56 or (E-F) day 100
and assessed for weight loss and airway obstruction (Penh).
Asterisks represent significance between no vaccine and preF+CpG
and pound symbols represent significance between CpG and preF+CpG
as determined by (A-B) Student t test, or (C-F) 2-way ANOVA with
Dunnett's post hoc test. .sup.*/# p<0.05, .sup.**/## p<0.01,
.sup.***/### p<0.001.
[0013] FIG. 7. Prime/boost nanoparticle vaccination with prefusion
RSV F reduces infectious RSV particles. (A-B) BALB/c mice were
primed with 500 .mu.g of the indicated nanoparticle formulation
i.n. on day 0, and boosted with 500 .mu.g i.n. on day 28. No
vaccine mice were administered PBS i.n. on both prime and boost
days. RSV immune mice received 4.8.times.10.sup.6 PFU RSV-A2 i.n.
at the prime and PBS i.n. at the boost. On (A) day 56 or (B) day
100, all mice were challenged with 4.8.times.10.sup.6 PFU RSV-A2
i.n and infectious plaque-forming units (pfu) were quantified in
the lung on (A) day 2 or (A and B) day 4 by plaque assay. (C)
BALB/c mice were primed with 500 .mu.g of the indicated
nanoparticle formulation i.n. on day 0, and challenged with
4.8.times.10.sup.6 PFU RSV-A2 i.n. on day 28. No vaccine mice were
administered PBS i.n., and RSV immune mice received
4.8.times.10.sup.6 PFU RSV-A2 i.n. at the prime. On day 28, all
mice were challenged with 4.8.times.10.sup.6 PFU RSV-A2 i.n and
infectious pfu were quantified in the lung on day 4 by plaque
assay. Statistical significance was determined by (A) 2-way ANOVA
or (B-C) one-way ANOVA with a Tukey's post hoc test. *p<0.05,
**p<0.01, ***p<0.001.
[0014] FIG. 8. Prime/boost nanoparticle vaccination with prefusion
RSV F induces activated T cells in the lungs. BALB/c mice were
primed with 500 .mu.g of the indicated nanoparticle formulation
i.n. on day 0, and boosted with 500 .mu.g i.n. on day 28. No
vaccine mice were administered PBS i.n. on both prime and boost
days. RSV immune mice received 4.8.times.10.sup.6 PFU RSV-A2 i.n.
at the prime and PBS i.n. at the boost. Lungs and spleens were
harvested on day 42 and analyzed by flow cytometry. Frequency of
(A) activated (CD11a.sup.hiCD49d.sup.+) CD4 T cells and (B)
activated (CD11a.sup.hiCD8.sup.lo) CD8 T cells. Statistical
significance was determined by 2-way ANOVA with Tukey's post hoc
test. **p<0.01, ***p<0.001.
[0015] FIG. 9. Prime/boost nanoparticle vaccination with prefusion
RSV F induces tissue-resident CD4 and CD8 T cells. BALB/c mice were
primed with 500 .mu.g of the indicated nanoparticle formulation
i.n. on day 0, and boosted with 500 .mu.g i.n. on day 28. No
vaccine mice were administered PBS i.n. on both prime and boost
days. RSV immune mice received 4.8.times.10.sup.6 PFU RSV-A2 i.n.
at the prime and PBS i.n. at the boost. Lungs were harvested on day
42 and analyzed by flow cytometry. Number of activated CD45
intravascular antibody (i.v..sup.-) (A) CD103.sup.-CD69.sup.+CD4 T
cells and (B) CD103.sup.+CD69.sup.+CD8 T cells. Number of activated
IFN-.gamma..sup.+ (C) CD4 and (D) CD8 T cells following stimulation
with PMA/ionomycin. Number of (E) activated F.sub.85-93
tetramer.sup.+CD8 T cells and (F) i.v..sup.- activated F.sub.85-93
tetramer.sup.+CD8 T cells. Statistical significance was determined
by one-way ANOVA (C-F) with Tukey's post hoc test. *p<0.05,
**p<0.01, **p<0.001.
[0016] FIG. 10. BALB/c mice were primed with 500 .mu.g of the
indicated nanoparticle formulation i.n. on day 0, and boosted with
500 .mu.g i.n. on day 28. No vaccine mice were administered PBS
i.n. on both prime and boost days. RSV immune mice received
4.8.times.10.sup.6 PFU RSV-A2 i.n. at the prime and PBS i.n. at the
boost. (A-B) On (A) day 56 or (B) day 100, all mice were challenged
with 4.8.times.10.sup.6 PFU RSV-A2 i.n and monitored daily for the
respiratory parameter EF50. (C) On day 56, all groups were
challenged with 4.8.times.10.sup.6 PFU RSV-A2 i.n and RSV N gene
copy numbers per lung on day 4 were determined by RT-PCR. Asterisks
represent significance between no vaccine and preF+CpG and pound
symbols represent significance between CpG and preF+CpG as
determined by (A-B) 2-way ANOVA or (C) one-way ANOVA with Tukey's
post hoc test. .sup.*/# p<0.05, .sup.**/## p<0.01,
.sup.***/### p<0.001.
[0017] FIG. 11. Illustration of Pre-F protein triggering,
fold-back, and facilitating membrane fusion between a target cell
and a virion.
[0018] FIG. 12. Illustrative vaccination schedule.
DETAILED DESCRIPTION
[0019] The disclosed subject matter further may be described
utilizing terms as defined below.
[0020] Unless otherwise specified or indicated by context, the
terms "a", "an", and "the" mean "one or more." For example, "a
protein" and "an adjuvant" should be interpreted to mean "one or
more proteins" and "adjuvants," respectively.
[0021] As used herein, "about", "approximately," "substantially,"
and "significantly" will be understood by persons of ordinary skill
in the art and will vary to some extent on the context in which
they are used. If there are uses of the term which are not clear to
persons of ordinary skill in the art given the context in which it
is used, "about" and "approximately" will mean plus or minus
.ltoreq.10% of the particular term and "substantially" and
"significantly" will mean plus or minus >10% of the particular
term.
[0022] As used herein, the terms "include" and "including" have the
same meaning as the terms "comprise" and "comprising." The terms
"comprise" and "comprising" should be interpreted as being "open"
transitional terms that permit the inclusion of additional
components further to those components recited in the claims. The
terms "consist" and "consisting of" should be interpreted as being
"closed" transitional terms that do not permit the inclusion
additional components other than the components recited in the
claims. The term "consisting essentially of" should be interpreted
to be partially closed and allowing the inclusion only of
additional components that do not fundamentally alter the nature of
the claimed subject matter.
[0023] The terms "subject," "patient," and "individual" may be used
interchangeably herein. A subject may be a human subject. A subject
may refer to a human subject having or at risk for infection by
respiratory syncytial virus (RSV). Human RSV (HRSV) is the leading
cause of severe respiratory infections in neonates and children.
HRSV belongs to the Orthopneumovirus genus within the Pneumoviridae
family of viruses. HRSV is enveloped and has a negative-sense,
single-stranded RNA genome of approximately 15 kb that encodes 11
viral proteins which include the F (fusion) protein that is a
transmembrane protein of the virus and the M (matrix) protein that
is a core protein of the virus. The HRSV-GNA435/11 strain has been
sequenced and includes 15,277 bp encoding 11 viral proteins. (See
Lee et al., Complete Genome Sequence of Human Respiratory Syncytial
Virus Genotype A with a 72-Nucleotide Duplication in the Attachment
Protein G Gene, J. Virol., December 2012, Vol. 86, No. 24, p.
13810-13811, the content of which is incorporated herein by
reference in its entirety). The corresponding DNA sequence of the
HRSV genome is provided herein as SEQ ID NO:1. The amino acid
sequences of the NS1, NS2, N, M, P, G, F, SH, MS-1, MS-2, and L
genes are provided herein as SEQ ID NOs: 2-12, respectively.
[0024] The disclosed compositions may include an effective amount
of respiratory syncytial virus (RSV) F protein in a pre-fusion
stabilized form incorporated into biodegradable polyanhydride
polymer particles. The RSV F protein is a class I viral fusion
glycoprotein that mediates membrane fusion between RSV and a host
cell during viral entry. The F protein undergoes a conformation
change from a "pre-fusion" to a "post-fusion" state during virus
entry. (See FIG. 11). Some neutralizing antibodies against RSV have
been shown to bind to a site called (O), which is present only in
the pre-fusion form of F protein. Recombinant stabilized pre-fusion
forms of F protein have been disclosed in the art and have been
shown to be more effective at inducing neutralizing antibodies.
(See Steff et al., Nat. Commun., 8:1085 (2017), pages 1-10; Blais
et al., J. Virol. 91, e02437-16 (2017); McLellan et al., Science
342, 593-598 (2013); Krarup et al., Nat. Commun. 6, 8143 (2015);
and Joyce et al., Nat. Struct. Mol. Biol. 23, 611-820 (2016); the
contents of which are incorporated herein by reference in their
entireties. Pre-fusion stabilized forms of F protein that are
disclosed in the art include forms called DS-Cav1, DS-TriC,
Cav-1-TriC, and DS-Cav1-TriC (see McLellan et al., Science 342,
593-598 (2013)), Pre-F-GCN4t (see Blais et al., J. Virol. 91,
e02437-16 (2017)), and SC-DM, and SC-TM Krarup et al., Nat. Commun.
6, 8143 (2015)).
[0025] The disclosed compositions may include an effective amount
of respiratory syncytial virus (RSV) M protein incorporated into
biodegradable polyanhydride polymer particles. The M protein of RSV
is a core protein that may be important for inducing a
cell-mediated response against RSV infection.
[0026] Optionally, the disclosed compositions may include an
effective amount of other respiratory syncytial virus (RSV)
proteins incorporated into biodegradable polyanhydride polymer
particles. Other proteins or RSV may include one or more of the RSV
proteins selected from NS1, NS2, N, P, SH, G, M2-1, M2-2, L, or any
combinations thereof.
[0027] As used herein, the phrase "effective amount" shall mean
that dosage that provides the specific immunological response for
which a composition comprising that effective amount is
administered in a significant number of subjects. For example, an
effective amount of an antigen may include that amount which when
administered to a vaccinee induces an immune response in the
vaccinee, preferably a protective immune response against the
pathogen from which the antigen is derived. An effective amount of
an antigen that is administered to a particular patient in a
particular instance will not always be effective in treating the
conditions/diseases described herein, even though such dosage is
deemed to be a therapeutically effective amount by those of skill
in the art.
[0028] The compositions disclosed herein may be formulated as
vaccine compositions for administration to a subject in need
thereof. Such compositions can be formulated and/or administered in
dosages and by techniques well known to those skilled in the
medical arts taking into consideration such factors as the age,
sex, weight, and condition of the particular patient, and the route
of administration.
[0029] The compositions may include pharmaceutical solutions
comprising carriers, diluents, excipients, and surfactants as known
in the art. Further, the compositions may include preservatives.
The compositions also may include buffering agents.
[0030] The disclosed compositions typically include biodegradable
particles. The biodegradable particles typically have an average
effective diameter of less than about 5, 4, 3, 2, 1, 0.5, 0.1,
0.05, or 0.01 .mu.M, or the biodegradable particles have an average
effective diameter within a range bounded by any of these values
(e.g., 0.1-2 .mu.M).
[0031] In some embodiments, the disclosed particles may be
phagocytosed by antigen presenting cells, such as macrophage and
dendritic cells, when the disclosed particles are administered as
an immunogenic composition or vaccine formulation to a subject in
need thereof. Preferably, the disclosed particles have an effective
average diameter to permit phagocytosis by antigen presenting
cells. Particles larger than about 5 microns are unlikely to be
phagocytosed by antigen presenting cells and preferably the
particles have an effective average diameter of less than about 4
microns or more preferably the particles have an effective average
diameter of less than about 3 microns.
[0032] The disclosed particles typically are biodegradable as would
be understood in the art. The term "biodegradable" describes a
material that is capable of being degraded in a physiological
environment into smaller basic components by biochemical reactions
and/or physical reactions. The term "biodegradable" may be used
herein interchangeably with the term "bioerodible." Preferably, the
biodegradable particles are degraded (or eroded) into smaller basic
components are innocuous. For example, a biodegradable polymer may
be degraded into basic components that include, but are not limited
to, water, carbon dioxide, sugars, organic acids (e.g.,
tricarboxylic or amino acids), and alcohols (e.g., glycerol or
polyethylene glycol).
[0033] The disclosed compositions typically include biodegradable
polyanhydride polymer particles which may include particles
comprising or formed from homopolymers or copolymers. Biodegradable
polyanhydride homopolymer and copolymer particles are known in the
art. (See, e.g., U.S. Pat. Nos. 8,173,104 and 7,858,093, the
contents of which are incorporated herein by reference in their
entireties). In some embodiments, the biodegradable polyanhydride
polymer particles comprise a polymer formed from a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)alkane, a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)dioxa-alkane, and
a (C.sub.5-C.sub.20)alkanoic diacid. In particular, the
biodegradable polyanhydride polymer particles may comprise a
polymer formed from 1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA). Where the biodegradable polyanhydride polymer particles
are comprised of a polymer formed from CPH and CPTEG, the ratio of
CPH and CPTEG may be modulated to prepare particles having a
suitable release profile. In some embodiments, the biodegradable
polyanhydride polymer particles comprise a polymer formed from CPH
and CPTEG at a ratio CPH:CPTEG selected from 10:90, 20:80, 30:70,
40:60, 50:50, 60:40, 70:30, 80:20, and 90:10, or within a range
bounded by any of these ratios (e.g., 80-60:20-40 CPH:CPTEG). In
some embodiments, the biodegradable polyanhydride polymer particles
may be formulated to enhance uptake by and activation of dendritic
cells. (See Carrillo-Conde et al., Acta Biomaterialia 8 (2012)
3618-3628; the content of which is incorporated herein by reference
in its entirety)
[0034] Other biodegradable materials that may be utilized to
prepare the particles contemplated herein may include materials
disclosed in one or more of U.S. Pat. Nos. 7,470,283; 7,390,333;
7,128,755; 7,094,260; 6,830,747; 6,709,452; 6,699,272; 6,527,801;
5,980,551; 5,788,979; 5,766,710; 5,670,161; and 5,443,458; and U.S.
Published Application Nos. 20090319041; 20090299465; 20090232863;
20090192588; 20090182415; 20090182404; 20090171455; 20090149568;
20090117039; 20090110713; 20090105352; 20090082853; 20090081270;
20090004243; 20080249633; 20080243240; 20080233169; 20080233168;
20080220048; 20080154351; 20080152690; 20080119927; 20080103583;
20080091262; 20080071357; 20080069858; 20080051880; 20080008735;
20070298066; 20070288088; 20070287987; 20070281117; 20070275033;
20070264307; 20070237803; 20070224247; 20070224244; 20070224234;
20070219626; 20070203564; 20070196423; 20070141100; 20070129793;
20070129790; 20070123973; 20070106371; 20070050018; 20070043434;
20070043433; 20070014831; 20070005130; 20060287710; 20060286138;
20060264531; 20060198868; 20060193892; 20060147491; 20060051394;
20060018948; 20060009839; 20060002979; 20050283224; 20050278015;
20050267565; 20050232971; 20050177246; 20050169968; 20050019404;
20050010280; 20040260386; 20040230316; 20030153972; 20030153971;
20030144730; 20030118692; 20030109647; 20030105518; 20030105245;
20030097173; 20030045924; 20030027940; 20020183830; 20020143388;
20020082610; and 0020019661; the contents of which are incorporated
herein by reference in their entireties.
[0035] Typically, the biodegradable particles disclosed herein are
degraded in vivo at a degradation rate such that the particles lose
no more than about 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or
99% of their initial mass (or within a range bounded by any of
these values) after about 1, 2, 3, 4, 5, 6, 7, or 8 weeks or more
post-administration (or within a range bounded by any of these
values). The particles may comprise or may be formed from polymeric
or non-polymeric biodegradable material. If the particles comprise
polymeric material, typically the particles are degraded into
biodegradable monomers. If the particles comprise non-polymeric
material, typically the particles are degraded into biodegradable
components.
[0036] The disclosed biodegradable particles may be prepared by
methods known in the art including, but not limited to,
spray-drying, precipitation, and grinding. In some embodiments, the
biodegradable particles may be formed from a solution or suspension
of a biodegradable material optionally in the presence of one or
more additional agents such as adjuvants, apoptosis inhibitors,
and/or antigens (e.g., by spray-drying the solution or suspension).
As such, the biodegradable particles may comprise biodegradable
material and optionally may comprise one or more additional agents
such as adjuvants, apoptosis inhibitors, and/or antigens.
[0037] The disclosed biodegradable particles may be administered by
various routes in order to induce a response in a subject. Routes
of administration may include, but are not limited to, intranasal,
pulmonary, oral, subcutaneous, intramuscular, and intravenous.
[0038] In some embodiments, the disclosed methods comprise
administering a composition comprising biodegradable particles to
induce an immune response in the subject. In other embodiments, the
disclosed methods consist of administering a composition consisting
of biodegradable particles to induce an immune response in the
subject. The induced immune response may include an antibody
response, a Th1 cell response and a CD8 CTL response.
[0039] The compositions disclosed herein optionally include an
adjuvant. The term "adjuvant" refers to a compound or mixture that
enhances an immune response. An adjuvant can serve as a tissue
depot that slowly releases the antigen and also as a lymphoid
system activator that non-specifically enhances the immune
response. Examples of adjuvants which may be utilized in the
disclosed compositions include but are not limited to, co-polymer
adjuvants (e.g., Pluronic L1219 brand poloxamer 401, CRL1005, or a
low molecular weight co-polymer adjuvant such as Polygen.RTM.
adjuvant), poly (I:C), R-848 (a Th1-like adjuvant), resiquimod,
imiquimod, PAM3CYS, aluminum phosphates (e.g., AlPO.sub.4),
loxoribine, potentially useful human adjuvants such as BCG (Bacille
Calmette-Guerin) and Corynebacterium parvum, CpG
oligodeoxynucleotides (ODN), cholera toxin derived antigens (e.g.,
CTA1-DD), lipopolysaccharide adjuvants, complete Freund's adjuvant,
incomplete Freund's adjuvant, saponin (e.g., Quil-A), mineral gels
such as aluminum hydroxide, surface active substances such as
lysolecithin, pluronic polyols, polyanions, peptides, oil or
hydrocarbon emulsions in water (e.g., MF59 available from Novartis
Vaccines or Montanide ISA 720), keyhole limpet hemocyanins, and
dinitrophenol.
[0040] The compositions disclosed herein may include pharmaceutical
compositions that are administered as vaccines. Typically, the
pharmaceutical composition comprises an effective amount or
concentration of an antigen for inducing a protective or
therapeutic immune response against a disease, which may include,
but is not limited to infection by a pathogen such as RSV. Inducing
a protective or therapeutic immune response may include inducing an
antibody response, as well as a CD4 and/or CD8 T cell immune
response to one or more epitopes of a protein associated with a
pathogen (e.g., a protein associated with RSV). Inducing a
protective or therapeutic immune response may include inducing an
antibody response, as well as a Th1 response and/or a CD8 T cell
response to one or more epitopes of a protein associated with the
pathogen. As utilized herein, a Th1-response may be characterized
by cytokine production such as interferons (e.g., IFN-.gamma.),
tumor necrosis factor (e.g., TNF), and interleukins (e.g., IL-2). A
Th1-response also may be characterized by increased killing
efficiency of macrophages with respect to a pathogen and the
proliferation of cytotoxic CD8.sup.+ cells against the pathogen. A
Th1 response also may be characterized by the presence of
opsonizing antibodies against the antigen.
[0041] Inducing a protective response may include inducing immunity
against the pathogen, and in some embodiments, inducing protective
immunity and/or sterilizing immunity against the pathogen. Inducing
a therapeutic response may include reducing the pathogenic load of
a subject, for example, as determined by measuring the amount of
circulating pathogen before and after administering the
composition. Inducing a therapeutic response may include reducing
the degree or severity of at least one symptom of infection by the
pathogen.
[0042] The presently disclosed methods may be utilized for inducing
a protective or therapeutic immune response against disease by
administering the pharmaceutical compositions disclosed herein
(e.g., as immunogenic compositions or vaccines) to a subject in
need thereof, which may include a human or non-human having or at
risk for acquiring the disease. The methods may include
administering a first pharmaceutical composition and optionally may
include administering a second pharmaceutical composition to
augment or boost an immunogenic response induced by the first
pharmaceutical composition. The first and second pharmaceutical
compositions may be the same or different. The optionally
administered second pharmaceutical composition may be administered
prior to, concurrently with, or after administering the first
pharmaceutical composition. In some embodiments, the first
composition is administered and then the second composition is
administered after waiting at least about 1, 2, 3, 4, 5, or 6
weeks. The first composition (and the second composition) may be
administered one or more times.
[0043] The presently disclosed compositions, kits, and methods may
be utilized to protect against or treat infection by a pathogen. As
used herein, a "pathogen" includes, but is not limited to a living
microorganism such as bacteria, viruses, and fungi that cause
disease in a host. As used herein, a "pathogen" includes
respiratory syncytial virus (RSV).
[0044] The presently disclosed composition may be administered to
potentiate or enhance an immune response. As used herein,
"potentiating" or "enhancing" an immune response means increasing
the magnitude and/or the breadth of the immune response. For
example, the number of cells that recognize a particular epitope
may be increased ("magnitude") and/or the numbers of epitopes that
are recognized may be increased ("breadth"). Preferably, an
enhanced antibody response as well as an enhancement in CD4 and/or
CD8 T-cell responses may be obtained by administering the
pharmaceutical composition disclosed herein.
ILLUSTRATIVE EMBODIMENTS
[0045] The following Embodiments are illustrative and should not be
interpreted to limit the scope of the claimed subject matter.
Embodiment 1
[0046] A vaccine composition comprising an effective amount of
respiratory syncytial virus (RSV) F protein in a pre-fusion
stabilized form and/or M protein incorporated into biodegradable
polyanhydride polymer particles for inducing an immune response
against RSV.
Embodiment 2
[0047] The vaccine composition of embodiment 1, comprising an
effective amount of RSV F protein in the pre-fusion stabilized form
incorporated into the biodegradable polyanhydride polymer particles
for inducing an immune response against RSV.
Embodiment 3
[0048] The vaccine composition of embodiment 1 or 2, wherein the F
protein in a pre-fusion stabilized form is selected from the group
consisting of DS-Cav1, DS-TriC, Vav-1-TriC, DX-Cav1-TriC,
Pre-F-GCN4t, SC-DM, and SC-TM.
Embodiment 4
[0049] The vaccine composition of any of the foregoing embodiments,
wherein the F protein in a pre-fusion stabilized form is
DS-Cav1.
Embodiment 5
[0050] The vaccine composition of embodiment 1, comprising an
effective amount of RSV M protein incorporated into the
biodegradable polyanhydride polymer particles for inducing an
immune response against RSV.
Embodiment 6
[0051] The vaccine composition of any of the foregoing embodiments,
further comprising an adjuvant, optionally wherein the adjuvant is
incorporated into the biodegradable polyanhydride polymer
particles.
Embodiment 7
[0052] The vaccine composition of any of the foregoing embodiments,
further comprising a CpG oligonucleotide, optionally wherein the
CpG oligonucleotide is incorporated into the biodegradable
polyanhydride polymer particles.
Embodiment 8
[0053] The vaccine composition of any of the foregoing embodiments,
further comprising a CpG oligodeoxynucleotide (ODN), optionally
wherein the CpG ODN is incorporated into the biodegradable
polyanhydride polymer particles.
Embodiment 9
[0054] The vaccine composition of any of the foregoing embodiments,
wherein the particles have an average effective diameter of less
than about 5, 4, 3, 2, 1, 0.5, 0.1, 0.05, or 0.01 .mu.M, or have an
average effective diameter within a range bounded by any of these
values (e.g., 2-0.1 .mu.M).
Embodiment 10
[0055] The vaccine composition of any of the foregoing embodiments,
wherein the vaccine composition induces an antibody response as
well as a CD4 T cell response (e.g., a Th1-type response), a CD8 T
cell response, or a combination thereof.
Embodiment 11
[0056] The vaccine composition of any of the foregoing embodiments,
wherein biodegradable polyanhydride polymer particles comprise a
polymer formed from a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)alkane, a
1,.omega.-bis(p-carboxyphenoxy)(C.sub.2-C.sub.12)dioxa-alkane, and
a (C.sub.5-C.sub.20)alkanoic diacid.
Embodiment 12
[0057] The vaccine composition of any of the foregoing embodiments,
wherein the biodegradable polyanhydride polymer particles comprise
a polymer formed from 1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA).
Embodiment 13
[0058] The vaccine composition of any of the foregoing embodiments,
wherein the biodegradable polyanhydride polymer particles comprise
a polymer formed from 1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA), wherein the polymer is formed from CPH and CPTEG at a
ratio CPH:CPTEG selected from 10:90, 20:80, 30:70, 40:60, 50:50,
60:40, 70:30, 80:20, and 90:10, or within a range bounded by any of
these ratios (e.g., 80-60:20-40 CPH:CPTEG).
Embodiment 14
[0059] The vaccine composition of any of the foregoing embodiments,
wherein the biodegradable polyanhydride polymer particles comprise
a polymer formed from 1,6-bis(p-carboxyphenoxy)hexane (CPH),
1,8-bis(p-carboxyphenoxy)-3,6-dioxaoctance (CPTEG), and sebacic
acid (SA), wherein the polymer is formed from CPH and CPTEG at a
ratio CPH:CPTEG of about 80:20.
Embodiment 15
[0060] The vaccine composition of any of the foregoing embodiments,
further comprising an RSV protein selected from NS1, NS2, N, P, SH,
G, M2-1, M2-2, L, or any combinations thereof.
Embodiment 16
[0061] A method comprising administering any of the foregoing
vaccine compositions to a subject who is at risk for infection by
RSV.
Embodiment 17
[0062] The method of embodiment 16, wherein after the vaccine
composition is administered to the subject, the subject is
protected against infection by RSV.
Embodiment 18
[0063] The method of embodiment 16 or 17, wherein the vaccine
composition is administered by a route selected from intranasal,
pulmonary, oral, subcutaneous, intramuscular, or intravenous.
EXAMPLES
[0064] The following Examples are illustrative and should not be
interpreted to limit the scope of the claimed subject matter.
[0065] Title--Evaluation of a Polyanhydride-Based Nanoparticle
Vaccine Utilizing RSV M and/or Prefusion F
[0066] Reference is made to the poster presentation entitled
"Evaluation of a polyanhydride-based nanoparticle vaccine utilizing
RSV M and/or prefusion F," presented at the 11th International
Respiratory Syncytial Virus Symposium, Oct. 31-Nov. 4, 2018, which
is incorporated herein by reference in its entirety.
[0067] Abstract
[0068] Respiratory syncytial virus (RSV) is the leading cause of
lower respiratory tract infections in young children, resulting in
34 million new RSV infections each year, and approximately 125,000
hospitalizations annually in the United States alone. RSV
reinfection is common in children, and even adults can be
susceptible to repeated infection due to short-lived and incomplete
protective immunity following natural infection. Despite the
critical need, there is currently no licensed vaccine for RSV. Here
we developed a polyanhydride nanoparticle-based vaccine utilizing
the RSV matrix (M) protein and/or a prefusion-stabilized variant of
the RSV fusion (F) protein (DS-Cav1). Our nanoparticle formulation
offers several advantages over current vaccine strategies as it
allows for continual, controlled release of the antigen and has
been shown to induce robust T and B cell responses when paired with
antigens from other pathogens. Inclusion of the prefusion
conformation of RSV F within the vaccine allows for better exposure
of the major RSV F antigenic site, termed site 0, while the RSV M
protein contains epitopes that are known targets of both CD4 and
CD8 T cell responses. The RSV nanovaccine is composed of 20:80
1,8-bis(p-carboxyphenoxy)-3,6-dioxoctane
(CPTEG):1,6-bis(p-carboxyphenoxy)hexane (CPH) copolymer
nanoparticles encapsulating the M and DS-Cav1 prefusion F proteins
with CpG 1668 ODN. Additional formulations include RSV F in its
postfusion conformation with CpG, and DS-Cav1 protein and CpG.
Controls consist of nanoparticles containing either pre-F or
postfusion RSV F without CpG, and nanoparticles loaded with CpG
alone. Here we evaluated the immunogenicity and the protective
capacity of our nanoparticle vaccine strategy against a primary RSV
infection.
[0069] Methods
[0070] BALB/c mice were vaccinated intranasally with 500 .mu.g of
the nanoparticles in PBS administered at day 0 and subsequently
boosted intranasally at day 28. (See FIG. 12). At day 56 the
protective capacity of the nanoparticles was assessed by
determining viral titers in the lungs of vaccinated mice following
an RSV challenge. Using whole body plethysmography, we also
measured airway function to determine the capacity of the RSV
nanovaccine to protect against RSV-induced pulmonary injury. Lungs
were harvested post-prime or post-boost to evaluate the T and B
cell responses elicited by the nanoparticle vaccination.
[0071] Results
[0072] The inventors are using the M+prefusion RSV F nanoparticle
vaccine to determine the optimal vaccine regimen to provide
protection against RSV-induced disease. Additionally, the inventors
are investigating the ideal mixture of humoral and cell-mediated
immunity necessary to establish long-term protective immunity
against RSV. Information from these studies will be critical to
establish optimal thresholds for protective immunity against
RSV.
[0073] The results in FIG. 1 illustrate that a prime/boost
nanoparticle vaccination strategy with prefusion RSV F protects
against RSV-induced disease. BALB/c mice were primed with 500 .mu.g
of the indicated nanoparticle formulation i.n. on day 0, and
boosted with 500 .mu.g i.n. on day 28. Control mice (labeled RSV)
were administered PBS i.n. on both prime and boost days. On day 56,
all mice were challenged with 4.8.times.10.sup.6 PFU RSV-A2 i.n.
and assessed for weight loss, Penh, and EF50.
[0074] FIG. 2 illustrates that prime/boost nanoparticle vaccination
with prefusion RSV F reduces RSV N gene viral copy numbers. BALB/c
mice were primed with 500 .mu.g of the indicated nanoparticle
formulation i.n. on day 0, and boosted with 500 .mu.g i.n. on day
28. Control mice (labeled RSV) were administered PBS i.n. on both
prime and boost days. On day 56, all mice were challenged with
4.8.times.10.sup.6 PFU RSV-A2 i.n. 4 days post-challenge lungs were
harvested for RNA. RT-PCR was performed to determine RSV N gene
copy numbers.
[0075] FIG. 3 illustrates that initial priming vaccination with
prefusion RSV F induces lung-resident CD4 and CD8 T cells. BALB/c
mice were primed with 500 .mu.g of the indicated nanoparticle
formulation or PBS (naive) i.n. on day 0. Lungs and spleen were
harvested on day 8 and analyzed by flow cytometry. The frequency of
activated (CD11a.sup.hiCD49d.sup.+) CD4 T cells and activated
(CD11a.sup.hiCD8.sup.lo) CD8 T cells was assessed as indicated in
FIGS. 3A and 3B. The number of i.v..sup.-CD4 and i.v..sup.-CD8 T
cells was assessed as indicated in FIGS. 3C and 3D. The number of
activated i.v..sup.- CD103.sup.-CD69.sup.+CD4 T cells and
CD103.sup.+CD69.sup.+CD8 T cells was assessed as indicated on FIGS.
3E and 3F. The representative flow cytometry plots of germinal
center B cells (CD19.sup.+CDB220.sup.+Fas.sup.+GL-7.sup.+) is
illustrated in FIG. 3G.
[0076] FIG. 4 illustrates that a prime/boost nanoparticle
vaccination induces RSV-specific antibodies in serum. BALB/c mice
were primed with 500 .mu.g of the indicated nanoparticle
formulation i.n. on day 0, and boosted with 500 .mu.g i.n. on day
28. Control mice (labeled naive) were administered PBS i.n. on both
prime and boost days. On day 14 and 56 serum was assessed for total
RSV-specific IgG, IgG1, or IgG2a.
[0077] FIG. 5 illustrates that a prime/boost nanoparticle
vaccination with prefusion RSV F induces lung-resident B cells,
CD4, and CD8 T cells. BALB/c mice were primed with 500 .mu.g of the
indicated nanoparticle formulation or PBS (naive) i.n. on day 0,
and boosted with 500 .mu.g i.n. on day 28. Lung and spleen were
harvested on day 42 and analyzed by flow cytometry. We assessed the
number of i.v..sup.- B cells, the number of activated i.v..sup.-
CD103.sup.-CD69.sup.+CD4 T cells and CD103.sup.+CD69.sup.+CD8 T
cells. We also assessed the number of activated
IFN-.gamma..sup.+CD4 T cells and IL-5.sup.+CD4 T cells following
stimulation with PMA/ionomycin.
CONCLUSION
[0078] Prime/boost nanoparticle vaccination with a prefusion RSV F
nanoparticle-based vaccine reduced weight loss, pulmonary
dysfunction, and viral copy numbers following an RSV challenge.
Priming vaccination alone was shown to be sufficient to elicit
i.v.sup.- tissue-resident CD4 and CD8 T cells. Prime/boost
nanoparticle vaccination generated RSV-specific antibodies in
serum, and prime/boost vaccination elicited IFN-.gamma..sup.+CD4 T
cells and tissue-resident T and B cells.
[0079] There are numerous benefits to the RSV vaccine as prepared
by the inventors. First, the inventors' nanoparticle formulation
allows for continual, controlled release of the antigen(s). Second,
the inventors' nanoparticle formulation includes the F protein in a
pre-fusion stabilized form, which allows for better exposure of the
major RSV F antigenic site (0) to a vaccinee's immune system.
Third, the inventors' nanoparticle formulation induces robust B and
T cell responses due to inclusion of both of the F protein in a
pre-fusion stabilized form and the M protein.
Example 2--Protection Against RSV-Induced Disease by Nanoparticle
Formulation Containing RSV Pre-F Protein and CpG Adjuvant
[0080] Our data demonstrate that a single prime only immunization
with the nanoparticle formulation containing RSV pre-F+CpG adjuvant
is sufficient to provide protection against RSV-induced disease
including weight loss and airway dysfunction (e.g Penh) as compared
to unimmunized control mice or mice immunized with nanoparticles
containing the CpG adjuvant only (without the PreF antigen). (See
FIG. 6). Prime only immunization is also sufficient to
significantly reduce virus replication in the lung as compared to
unimmunized mice or mice immunized with nanoparticles containing
the CpG adjuvant only (without the PreF antigen). Mice immunized
using a prime/boost immunization approach also exhibit significant
protection against RSV-induced disease including weight loss and
airway dysfunction (e.g Penh) as compared to unimmunized mice when
challenged either at 56 days post-prime (see FIGS. 6C and 6D) or
Day 100 post-prime (see FIGS. 6E and 6F).
[0081] Mice that received a prime/boost immunization exhibited
significantly reduced virus replication in the lung as compared to
unimmunized mice or mice immunized with nanoparticles containing
the CpG adjuvant only (without the PreF antigen) as shown in FIG.
7A (day 56 challenge) or FIG. 7B (day 100 challenge).
[0082] Our data indicate that prime/boost vaccination with PreF+CpG
nanoparticles elicits an increase in activated CD4 and CD8 T cells
as compared to mice immunized with nanoparticles containing only
CpG or unimmunized mice (FIGS. 8A and 8B). This data is consistent
with the induction of a T cell response following the nanoparticle
vaccination.
[0083] Additional data indicate that the activated CD4 and CD8 T
cells exhibit phenotypic cell surface markers (CD69.sup.+ for CD4 T
cells and CD69.sup.+CD103.sup.+ for CD8 T cells) that is consistent
with a tissue-resident population (e.g. Trm) that may be important
in providing protection (FIGS. 9A and 9B). In addition, the
activated CD4 and CD8 T cells make IFN-.gamma. following
stimulation indicating that they are of a Th1 and Tc1 phenotype,
respectively (FIGS. 9C and 9D).
[0084] Using MHC-class I tetramers to identify RSV-specific CD8 T
cells, we observed a significant increase in the total number of
RSV tetramer-specific CD8 T cells specific to the F85-93 CD8 T cell
epitope 2 weeks following the boost immunization (eg day 42
post-prime) as compared to unimmunized mice or mice immunized with
nanoparticles containing the CpG adjuvant only (without the PreF
antigen) as shown in FIG. 9E. FIG. 9F shows that these RSV
tetramer-staining cells are located in the lung tissue.
[0085] FIG. 10 represents additional data demonstrating that mice
immunized using a prime/boost immunization approach exhibit
significant protection against RSV-induced airway dysfunction (e.g
EF50) as compared to unimmunized mice when challenged either at 56
days post-prime (FIG. 5A) or at 100 days post-prime (FIG. 5B). FIG.
5C demonstrates additional data showing that mice immunized using a
prime/boost immunization approach using PreF+CpG nanoparticles
exhibit significant protection against RSV replication as measured
by RT-PCR for the RSV N gene as compared to mice immunized with
nanoparticles containing only CpG or unimmunized mice.
[0086] It will be readily apparent to one skilled in the art that
varying substitutions and modifications may be made to the
invention disclosed herein without departing from the scope and
spirit of the invention. The invention illustratively described
herein suitably may be practiced in the absence of any element or
elements, limitation or limitations which is not specifically
disclosed herein. The terms and expressions which have been
employed are used as terms of description and not of limitation,
and there is no intention in the use of such terms and expressions
of excluding any equivalents of the features shown and described or
portions thereof, but it is recognized that various modifications
are possible within the scope of the invention. Thus, it should be
understood that although the present invention has been illustrated
by specific embodiments and optional features, modification and/or
variation of the concepts herein disclosed may be resorted to by
those skilled in the art, and that such modifications and
variations are considered to be within the scope of this
invention.
[0087] Citations to a number of patent and non-patent references
are made herein. The cited references are incorporated by reference
herein in their entireties. In the event that there is an
inconsistency between a definition of a term in the specification
as compared to a definition of the term in a cited reference, the
term should be interpreted based on the definition in the
specification.
Sequence CWU 1
1
12115277DNAHuman Respiratory Syncytial Virus 1acgcgaaaaa atgcgtacaa
caaacttgcg taaaccaaaa aaatggggca aataagaatt 60tgataagtac cacttaaatt
taactccttt ggttagagat gggcagcaac tcattgagta 120tgataaaagt
tagattgcaa aatctgtttg acaatgatga agtagcattg ttaaaaataa
180catgctatac tgacaaatta atacagttaa ctaatgcttt ggctaaggca
gttatacata 240caatcaaatt gaatggcatt gtatttgtgc atgttattac
aagtagtgat atttgcccta 300ataataatat tgtagtgaaa tccaatttca
caacaatgcc agtattacaa aatggaggtt 360atatatggga aatgatggaa
ttaacacact gctctcaacc taatggccta atagatgaca 420attgtgaaat
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480aattatctga attacttgga tttgacctca atccataaat cataataaat
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gacacaacac acaatgatac cacaccacaa 660agactgatga tcacagacat
gagaccatta tcgcttgaga ctataataac atctctaacc 720agagatatca
taacacataa atttatatac ttgataaatc atgaatgcat agtgagaaaa
780cttgatgaaa gacaggccac atttacgttt ctggtcaact atgaaatgaa
actattgcac 840aaagtgggaa gcactaaata taaaaaatat actgaataca
acacaaaata tggcactttc 900cctatgccaa tatttatcaa tcatgatggg
ttcttagaat gcattggcat taagcctacc 960aagcacacac ccataatata
caagtatgat ctcaatccat gaatatcaaa ccaagattca 1020aacaatccga
aataacaact ttatgcataa tcacactcca tagtccagat ggagcctgaa
1080aattatagtt atttaaaatt aaggagagac ataagatgaa agatggggca
aatacaaaaa 1140tggctcctag caaagtcaag ttgaatgata cactcaacaa
agatcaacct ccatcatcca 1200gcaaatatac catccaacgg agcacaggag
acagcaccga cactcccaat tatgatgtgc 1260agaaacacac caataagcta
tgtggcatgt tattaatcac agaagatgct aatcataaat 1320tcactgggtt
aataggtatg ttatatgcta tgtctagatt aggaagagaa gacaccataa
1380aaatactcaa agatgcggga tatcatgtta aggcaaatgg agtggatgta
acaacacatc 1440gtcaagacat taatgggaaa gaaatgaaat ttgaagtgtt
aacattagca agcttaacaa 1500ctgaaattca aatcaacatt gagatagaat
ctagaaaatc ctacaaaaaa atgctaaaag 1560aaatgggaga ggtggctcca
gaatacaggc atgactctcc tgattgtggg atgataatat 1620tatgtatagc
agcattagta ataaccaaat tagcagcagg agatagatca ggtcttacag
1680ctgtgattag gagagctaat aatgtcctaa aaaatgaaat gaaacgttat
aaaggtttat 1740tacccaagga tatagccaac agcttctatg aagtgtttga
aaaatatcct cactttatag 1800atgtttttgt tcattttggt atagcacaat
cttctaccag aggtggcagt agagttgaag 1860ggatttttgc aggattgttt
atgaatgcct atggtgcagg gcaagtgatg ttacggtggg 1920gggtcttagc
aaaatcagtt aaaaacatta tgttaggaca cgctagtgta caagcagaaa
1980tggaacaagt tgtggaggtg tatgagtatg ctcagaaatt gggtggagaa
gcaggattct 2040accatatatt gaacaaccca aaagcatcac tattatcttt
gactcaattt cctcacttct 2100ctagtgtagt attgggcaat gctgctggcc
taggcataat gggagaatac agaggtacac 2160caaggaatca agatttatat
gatgctgcaa aagcatatgc tgaacaactc aaagaaaatg 2220gtgtgattaa
ctacagtgta ttagatttga cagcagaaga actagaggct atcaaacatc
2280agcttaatcc aaaagataat gatgtagagc tttgagttaa taaaaaggtg
gggcaaataa 2340atcatcatgg aaaagtttgc tcctgaattc catggagaag
atgcaaacaa cagagccacc 2400aaattcctag aatcaataaa gggcaaattc
acatcaccca aagatcccaa gaaaaaagat 2460agtatcatat ctgtcaactc
aatagatata gaagtaacca aagaaagccc tataacatca 2520aattcaacca
ttataaaccc aataaatgag acagatgata ctgtagggaa caagcccaat
2580tatcaaagaa agcctctagt aagtttcaaa gaagacccta cgccaagtga
taatcctttt 2640tcaaaactat acaaagaaac catagaaaca tttgataaca
atgaagaaga atctagctat 2700tcatatgaag aaataaatga tcagacaaac
gataatataa cagcaagatt agataggatt 2760gatgagaaat taagtgaaat
actaggaatg cttcacacat tagtagtagc gagtgcagga 2820cccacatctg
ctcgggatgg tataagagat gccatggttg gtttaagaga agaaatgata
2880gaaaaaatca gaactgaagc attaatgacc aatgacagac tagaagctat
ggcaagactc 2940aggaatgaag aaagtgaaaa gatggcaaaa gacacatcag
atgaagtgtc tctcaatcca 3000acatcagaga aactgaacaa cctgttggaa
gggaatgata gtgacaatga tctatcactt 3060gaagatttct gattagctac
caaactgtac atcaaaacac aacaccaata gaaaaccaac 3120aaacaaacca
actcacccat ccaaccaaac atctatctgc tgattagcca accagccaaa
3180aaacaaccag ccaatctaaa actagccacc cggaaaaaat cgatactata
gttacaaaaa 3240aagatggggc aaatatggaa acatacgtga ataaacttca
cgagggctcc acatacacag 3300ctgctgttca atacaatgtc ctagaaaaag
acgatgatcc tgcatcactt acaatatggg 3360tgcccatgtt ccaatcatcc
atgccagcag atctactcat aaaagaacta gccaatgtca 3420atatactagt
gaaacaaata tccacaccca agggaccctc attaagagtc atgataaact
3480caagaagtgc agtgctagca caaatgccca gcaaatttac catatgtgcc
aatgtgtcct 3540tggatgaaag aagcaagctg gcatatgatg taaccacacc
ctgtgaaatt aaggcatgca 3600gtctaacatg cctaaaatca aaaaatatgt
taactacagt taaagatctc actatgaaaa 3660cactcaaccc aacacatgac
atcattgctt tatgtgaatt tgaaaatata gtaacatcaa 3720aaaaagtcat
aataccaaca tacctaagat ctatcagcgt cagaaataaa gatctgaaca
3780cacttgaaaa tataacaacc actgaattca aaaatgccat tacaaatgca
aaaatcatcc 3840cttactcagg attactgtta gtcatcacag tgactgacaa
caaaggagca ttcaaataca 3900taaagccaca aagtcaattc atagtagatc
ttggagctta cctagaaaaa gaaagtatat 3960attatgttac aacaaattgg
aagcacacag ctacacgatt tgcaatcaaa cccatggaag 4020attaaccttt
ttcctctaca ttaatgagta gattcataca aactttctaa ctacattctt
4080cacttcacaa tcataatcac caaccctctg tggttcaatc aatcaaacaa
aactcatcag 4140gagttccaga tcatcccaag tcattgttca tcagatccag
tactcaaata agttaataaa 4200aaatccacat ggggcaaata atcattgagg
gtaatccaac taatcacaac atctgtcaac 4260atagacaagt caacacgcta
gataaaatca accaatggaa aatacatcca taactataga 4320attctcaagc
aaattctggc cttactttac actaatacac atgataacaa caataatctc
4380tttgataatc ataatctcca tcatgattgc aatactaaac aaactctgcg
aatataatgt 4440attccataac aaaacctttg agctaccaag agctcgagtc
aatacatagc atttaccaat 4500ctgatagctc aaaacagtaa ccttgcattt
gtaaatgaac taccctcact tcttcacaaa 4560accacatcaa catctcacca
tgcaagccat catctatacc ataaagtagt taattaaaaa 4620atagtcataa
caatgaacta ggatattaag accaaaaaca acgctggggc aaatgcaaac
4680atgtccaaaa ccaaggacca acgcaccgcc aagacactag aaaggacctg
ggacactctc 4740aatcatctat tattcatatc atcgtgctta tacaagttaa
atcttaaatc tatagcacaa 4800atcacattat ctattttggc aatgataatc
tcaacctcac ttataattgc agccatcata 4860ttcatagcct cggcaaacca
caaagtcaca ctaacaactg caatcataca agatgcaacg 4920aaccagatca
agaacacaac cccaacatac ctcactcaga atccccagct tggaatcagc
4980ttctccaatc tgtccggaac tacatcacaa tccaccacca tactagcttc
aacaacacca 5040agtgctgagt caaccccaca atccacaaca gtcaagatca
aaaacacaac aacaacccaa 5100atattaccta gcaaacccac cacaaaacaa
cgccaaaata aaccacaaaa caaacccaac 5160aatgattttc actttgaagt
gttcaatttt gtaccctgca gcatatgcag caacaatcca 5220acctgctggg
ccatctgcaa gagaatacca aacaaaaaac ctggaaagaa aaccaccacc
5280aagcccacaa aaaaaccaac cctcaagaca accaaaaaag atcccaaacc
tcaaaccaca 5340aaaccaaagg aagtactcac taccaagcct acaggaaagc
caaccatcaa caccactaaa 5400acaaacatca gaactacact gctcacctcc
aacaccaaag gaaatccaga acacacaagt 5460caagaggaaa ccctccactc
aaccacctcc gaaggctatc taagcccatc ccaagtctat 5520acaacatccg
gtcaagagga aaccctccac tcaaccacct ccgaaggcta tctaagccca
5580tcacaagtct atacaacatc cgagtaccta tcacaatctc tatcttcatc
caacacaaca 5640aaatgatagt cattaaaaag cgtattgttg caaaaagcca
tgaccaaatc aaacagaatc 5700aaaatcaact ctggggcaaa taacaatgga
gttgccaatc ctcaaaacaa atgctattac 5760cacaatcctt gctgcagtca
cactctgttt cgcttccagt caaaacatca ctgaagaatt 5820ttatcaatca
acatgcagtg cagttagcaa aggctatctt agtgctctaa gaactggttg
5880gtatactagt gttataacta tagaattaag taatatcaag gaaaataagt
gtaatggtac 5940agacgctaag gtaaaattaa taaaacaaga attagataaa
tataaaaatg ctgtaacaga 6000attgcagttg ctcatgcaaa gcacaccagc
agccaacagt cgagccagaa gagaactacc 6060aagatttatg aattatacac
tcaacaatac caaaaacacc aatgtaacat taagtaagaa 6120aaggaaaaga
agatttcttg gatttttgtt aggtgttgga tctgcaatcg ccagtggcat
6180tgccgtatcc aaggtcctgc acctagaagg ggaagtgaac aaaatcaaaa
gtgctctact 6240atccacaaac aaggctgtag tcagcttatc taatggagtc
agtgtcttaa ccagcaaggt 6300gttagacctc aaaaactata tagataaaca
gttgttacct attgttaaca agcaaagctg 6360cagcatatca aacattgaaa
ctgtgataga gttccaacaa aagaacaaca gactactaga 6420gattaccaga
gaatttagtg ttaatgcagg tgtaactaca cctgtaagca cttatatgtt
6480aactaatagt gagttattat cattaatcaa tgatatgcct ataacaaatg
atcagaaaaa 6540gttaatgtcc agcaatgttc aaatagttag acagcaaagt
tactctatca tgtcaataat 6600aaaagaggaa gtcttagcat atgtagtaca
attaccacta tatggtgtaa tagatactcc 6660ttgttggaaa ctacacacat
ctcctctatg tacaaccaac acaaaggaag gatccaacat 6720ctgcttaaca
agaaccgaca gaggatggta ctgtgacaat gcaggatcag tatccttttt
6780cccacaagct gaaacatgta aagttcaatc gaatcgggtg ttttgtgaca
caatgaacag 6840tttaacatta ccaagtgagg taaatctctg caacattgac
atattcaacc ccaaatatga 6900ttgcaaaatt atgacttcaa aaacagatgt
aagcagctcc gttatcacat ctctaggagc 6960cattgtgtca tgctatggca
aaaccaaatg tacagcatcc aataaaaatc gtgggatcat 7020aaagacattc
tctaacgggt gtgattatgt atcaaataag ggggtggata ctgtgtctgt
7080aggtaataca ttatattatg taaataagca agaaggcaaa agtctctatg
taaaaggtga 7140accaataata aatttctatg atccattagt gttcccctct
gatgaatttg atgcatcaat 7200atctcaagtc aatgagaaaa ttaatcagag
tctagcattt atccgtaaat cagatgaatt 7260attacataat gtaaatgctg
gtaaatccac cacaaatatc atgataacta ccataattat 7320agtaattata
gtaatattgt tagcattaat tgcagttgga ctgcttctat actgcaaggc
7380cagaagcaca ccagtcacat taggtaagga tcaactgagt ggtataaata
atattgcatt 7440taataactga ataaaaatag cacctaatca tattcttaca
atggttcgct atttgaccat 7500agataaccca tctatcatta gattatccta
aaatttgaac ttcatcacaa ctttcatcta 7560taaaccatct cacttacact
ttttaagtag attcctattt tatagttata taaaacaatt 7620gaataccaaa
ttaacttact atttgtaaaa atgagaactg gggcaaatat gtcacgaagg
7680aatccttgca aattcgaaat tcgaggtcat tgcttgaatg gtaaaaggtg
tcattttagt 7740cataattatt ttgaatggcc accccatgca ctgcttgtaa
gacaaaactt tatgttaaac 7800agaatactta agtctatgga taaaagcata
gatactttgt cagaaataag tggagctgca 7860gagttggaca gaacagaaga
gtatgccctc ggtgtagttg gagtgctaga gagttatata 7920ggatcaataa
ataatataac taaacaatca gcatgtgttg ccatgagcaa actccttact
7980gaactcaaca gcgatgacat caaaaaacta agggacaatg aagagccaaa
ctcacccaaa 8040gtaagagtgt acaatactgt catatcatat attgaaagca
acaggaagaa caataaacaa 8100actatccatc tgttaaaaag attgccagca
gacgtattga agaaaaccat caaaaacaca 8160ttggatatcc acaagagcat
aaccatcaat aacccaaaag aatcaactgt tagtgatacg 8220aacgaccatg
ccaaaaataa tgatactacc tgacaaatat ccttgtagta taaattccat
8280actaataaca agtaattgta gagtcactat gtataatcaa aaaaacacac
tatatatcaa 8340tcaaaacaac caaaataacc atatataccc accggatcaa
ccattcaatg aaatccattg 8400gacctctcaa gacttgattg atgcaactca
aaattttcta caacatctag gtattactga 8460tgatatatac acaatatata
tattagtgtc ataatactca atcctaatac ttaccacatc 8520atcaaattat
taactcaaac aattcaagct atgggacaaa atggatccca ttattagtgg
8580aaattctgct aatgtttatc taactgatag ttatttaaaa ggtgttattt
ctttctcaga 8640atgtaacgct ttaggaagtt acatattcaa tggtccttat
ctcaaaaatg attataccaa 8700cttaattagt agacaaaatc cattaataga
acacataaat ctaaagaaac taaatataac 8760acagtcctta atatctaagt
atcataaagg tgaaataaaa atagaagaac ctacttactt 8820tcagtcatta
cttatgacat acaagagtat gacctcgtca gaacagacta ctactactaa
8880tttacttaaa aagataataa gaagagctat agaaatcagt gatgtcaaag
tctatgctat 8940attgaataaa ctggggctca aagaaaaaga caagattaaa
tccaataatg gacaagatga 9000agacaactca gtcattacta ccataatcaa
agatgatata cttttagctg tcaaggataa 9060tcaatctcat cttaaagcag
acaaaaatca atccacaaaa caaaaagata caatcaaaac 9120aacacttttg
aagaaattaa tgtgttcaat gcaacatcct ccatcatggt taatacattg
9180gtttaattta tacacaaaat taaacagcat attaacacaa tatcgatcta
gtgaggtaaa 9240aaaccatggt tttatattga tagataatca tactcttagt
ggattccaat ttattttgaa 9300tcaatatggt tgtatagttt atcataagga
actcaaaaga attactgtga caacttataa 9360tcaattcttg acatggaaag
atattagcct tagtagatta aatgtttgtt tgattacatg 9420gattagtaac
tgtttgaaca cattaaacaa aagcttaggc ttaagatgtg gattcaataa
9480tgttatcttg acacaattat tcctttatgg agattgtata ctaaaactat
tccacaatga 9540ggggttctac ataataaaag agatagaggg atttattatg
tctctaattt taaatataac 9600agaagaagat caattcagaa aacggtttta
taatagtatg ctcaacaaca tcacagatgc 9660cgccaacaaa gctcaaaaaa
atctgctatc aagagtatgt catacattat tagataagac 9720aatatcagat
aatataataa atggcagatg gataattcta ttgagcaagt tcctaaaatt
9780aattaagctt gcaggtgaca ataacctcaa caatctgagt gaattatatt
ttttgttcag 9840gatatttgga cacccaatgg tagatgaaag acaagccatg
gatgctgtta aagttaattg 9900caacgagacc aaattttact tgttaagtag
tttgagtatg ttaagaggag cttttatata 9960tagaattata aaagggtttg
taaataatta caacagatgg cctactttaa gaaatgccat 10020tgtcttaccc
ttaagatggt taacttacta taaactaaac acttatcctt ccttgttgga
10080acttacagaa agagatttga ttgttctatc aggactacgt ttctatcgag
agtttcggtt 10140gcctaaaaaa gtggatcttg aaatgatcat aaatgataag
gctatatcac ctcctaaaaa 10200tttaatatgg actagtttcc ctagaaatta
tatgccgtca cacatacaaa attatataga 10260acatgaaaaa ttaaaattct
ctgatagtga taaatcaaga agagtattag agtattattt 10320aagagataac
aaattcaatg aatgtgattt acacaactgt gtagttaatc aaagttatct
10380taacaacccg aatcatgtgg tatcattgac aggcaaagaa agagaactca
gtgtaggtag 10440aatgtttgca atgcaaccag gaatgttcag acaagttcaa
atattagcag agaaaatgat 10500agcagaaaac atattacaat ttttccctga
aagtcttaca agatatggtg atctagaact 10560acagaaaata ttagaattga
aagcaggaat aagtaacaaa tcaaatcgtt acaatgataa 10620ttacaacaat
tacattagta agtgctctat catcacagat ctcagcaaat tcaatcaagc
10680atttcgatat gaaacatcat gtatttgtag tgatgtactg gatgaactgc
atggtgtaca 10740atctctattt tcctggttac atttaactat tcctcatgtc
acaataatat gcacatatag 10800gcatgcaccc ccctatataa aggatcatat
tgtagatctt aacaatgtag atgagcaaag 10860tggactatat agatatcata
tgggtggtat cgaagggtgg tgtcaaaaac tatggactat 10920agaagctata
tcactattag atctaatatc tctcaaaggg aaattctcaa ttactgcttt
10980aattaatggt gacaatcaat caatagatat aagtaaacca gtcagactca
tggaaggtca 11040aactcatgct caagcagatt atttgctagc attaaatagt
ctcaaattac tgtataaaga 11100gtatgcagga ataggccaca aattaaaagg
aactgagact tatatatcga gagatatgca 11160atttatgagt aaaacgatcc
aacataacgg tgtatattac ccagctagta taaagaaagt 11220cctaagagtg
ggaccgtgga taaacactat acttgatgac ttcaaagtga gtctagaatc
11280tataggtagt ttgacacaag aattagaata tagaggtgaa agtctattat
gcagtttaat 11340atttaggaat gtatggttat ataatcaaat tgcattacaa
cttaaaaatc atgcattatg 11400taacaacaaa ttatatttgg atatattaaa
agttctaaaa cacttaaaaa ccttttttaa 11460tcttgataac attgatacag
cattaacatt gtatatgaat ttgcccatgt tatttggtgg 11520tggtgatccc
aacttgttat atcgaagttt ctatagaaga actcctgatt tcctcacaga
11580ggctatagtt cactctgtgt tcatacttag ttattataca aaccatgatt
taaaagataa 11640acttcaagat ctgtcagatg atagattgaa taagttctta
acatgcataa tcacgtttga 11700caaaaacccc aatgctgaat tcgttacatt
gatgagagat cctcaagctt taggatctga 11760gaggcaagct aaaattacta
gcgaaatcaa tagactggca gttaccgagg ttttgagcac 11820agctccaaac
aaaatatttt ccaaaagtgc acaacactat accactacag agatagatct
11880taatgatatt atgcaaaata tagaacctac atatcctcac gggttaagag
ttgtttatga 11940aagtttaccc ttttataaag cagagaaaat agtaaatctt
atatccggta caaaatctat 12000aactaacata ctggaaaaga cttctgccat
agacttaaca gatattgata gagccactga 12060gatgatgagg aaaaacataa
ctttgcttat aaggatatta ccattagatt gtaacagaga 12120taaaagagaa
atattgagta tggaaaacct aagtattact gaattaagca aatacgttag
12180agaaagatct tggtctttat ccaatatagt tggtgttaca tcacccagta
tcatgtatac 12240aatggacata aaatatacaa caagcactat agctagtggc
ataatcatag agaaatataa 12300tgtcaacagt ttaacacgtg gtgagagagg
acccactaaa ccatgggttg gttcatctac 12360acaagagaaa aagacaatgc
cagtttataa tagacaagtt ttaaccaaaa aacagagaga 12420tcaaatagat
ctattagcaa aattggattg ggtgtatgca tctatagata acaaggatga
12480atttatggag gaacttagca taggaactct tgggttaaca tatgagaagg
ccaaaaaatt 12540attcccacaa tatttaagtg ttaactattt gcatcgtctt
acagtcagta gtagaccatg 12600tgaattccct gcatctatac cagcttatag
aactacaaat tatcactttg atactagccc 12660tattaatcgc atattaacag
aaaagtatgg tgatgaagat attgatatag tattccaaaa 12720ctgtataagc
tttggcctta gcttaatgtc tgtagtagaa caatttacta atgtgtgtcc
12780taacagaatt attctcatac ccaagcttaa tgagatacat ttgatgaaac
ctcccatatt 12840cacaggtgat gttgatattc acaagttaaa acaagtgata
caaaaacaac atatgttttt 12900accagacaaa ataagtttga ctcaatatgt
ggaattattc ttaagtaata aaacactcaa 12960atctggatct aatgttaatt
ctaatttaat attggcgcat aagatatctg actattttca 13020taatacttac
attttaagta ctaatttagc tggacattgg attcttatta tacaacttat
13080gaaagattct aagggtattt ttgaaaaaga ttggggagag ggatatataa
ctgatcatat 13140gttcattaat ttgaaagttt tcttcaatgc ttataagaca
tatctcttgt gttttcataa 13200aggttacggc agagcaaagc tggagtgtga
tatgaatact tcagatctcc tatgtgtatt 13260ggaattaata gacagtagtt
attggaagtc tatgtctaag gtgtttttag aacaaaaagt 13320tatcaaatac
attcttagcc aggatgcaag tttacataga gtaaaaggat gtcatagctt
13380caaactatgg tttcttaaac gtcttaatgt agcagaattc acggtttgcc
cttgggttgt 13440taacatagat tatcatccaa cacatatgaa agcaatatta
acttatattg atcttgttag 13500aatgggattg ataaatatag atagaatata
cattaaaaat aaacacaagt tcaatgatga 13560gttttatact tctaatctgt
tttacattaa ttataacttc tcagataata ctcatctatt 13620aactaaacat
ataaggattg ctaattccga attagaaagt aattacaaca aattatatca
13680tcccacacca gaaaccctag aaaatatact aaccaatccg gttaaaagta
atggaaaaaa 13740gacactgagt gactattgta taggtaaaaa tgttgactca
ataatgttac catcgttatc 13800taataagaag cttattaaat cgtctacaat
gattagaacc aattgcagca gacaagattt 13860gtataattta tttcctacgg
ttgtgattga taaaattata gatcattcag gyaatacagc 13920caaatctaac
caactttaca ctactacttc tcatcaaata tccttagtgc acaatagcac
13980atcactttat tgcatgcttc cttggcatca tattaataga ttcaattttg
tatttagttc 14040tacaggttgt aaaattagta tagagtatat tttaaaagat
cttaaaatta aggatcctaa 14100ttgtatagca ttcataggtg aaggagcagg
gaatttatta ttgcgtacag tagtggaact 14160tcatcctgat ataagatata
tttacagaag tctgaaagat tgcaatgatc atagtttacc 14220aattgagttt
ttaaggctgt acaatggaca tatcaacatt gattatggtg aaaatttgac
14280cattcctgct acagatgcaa ccaacaacat tcattggtct tatttacata
taaagtttgc 14340tgaacctatc agtctttttg tctgtgatgc tgaattgcct
gtaacagtca actggagtaa 14400gattataata gagtggagca agcatgtaag
aaaatgcaag tactgttctt cagttaataa 14460atgtacatta atagtaaaat
atcatgctca agatgatatc gatttcaaat tagacaacat 14520aactatatta
aaaacttatg tatgcttagg cagtaagtta aagggatctg aagtttactt
14580agtccttaca ataggtcctg caaatgtgtt cccagtattt aatgtagcac
aaaatgctaa 14640attgatacta tcaagaacca aaaatttcat catgcctaaa
aaagctgata aagagtctat 14700tgatgcaaat attaagagtt tgataccctt
tctttgttac cctataacaa aaaaaggaat 14760taataccgca ttgtctaaat
taaagagtgt tgttagtgga gatatactat catattctat 14820agctggacgt
aatgaagttt tcagcaataa acttataaat cataagcata tgaacatctt
14880aaagtggttc aatcatgttt taaatttcag atcaacagaa ttaaactata
atcatttata 14940tatggtagaa tctacttatc ctcatctaag tgaattgtta
aacagcttga ctaccaatga 15000acttaaaaaa ctgattaaaa
tcacaggtag tttgttatac aacttttata atgaataatg 15060agcaaaaatc
ttataacaaa aatagctaca cactaacatt gtattcaatt atagttattt
15120aaaattaata attatataat ttttaataac ttctagtgaa ctaatcctaa
aattatcatt 15180ttgatctagg aagaataagt ttaaatccaa atctaattgg
tttatatgta tattaactaa 15240attacgagat attagttttt gacacttttt ttctcgt
152772139PRTHuman Respiratory Syncytial Virus 2Met Gly Ser Asn Ser
Leu Ser Met Ile Lys Val Arg Leu Gln Asn Leu1 5 10 15Phe Asp Asn Asp
Glu Val Ala Leu Leu Lys Ile Thr Cys Tyr Thr Asp 20 25 30Lys Leu Ile
Gln Leu Thr Asn Ala Leu Ala Lys Ala Val Ile His Thr 35 40 45Ile Lys
Leu Asn Gly Ile Val Phe Val His Val Ile Thr Ser Ser Asp 50 55 60Ile
Cys Pro Asn Asn Asn Ile Val Val Lys Ser Asn Phe Thr Thr Met65 70 75
80Pro Val Leu Gln Asn Gly Gly Tyr Ile Trp Glu Met Met Glu Leu Thr
85 90 95His Cys Ser Gln Pro Asn Gly Leu Ile Asp Asp Asn Cys Glu Ile
Lys 100 105 110Phe Ser Lys Lys Leu Ser Asp Ser Thr Met Thr Asn Tyr
Met Asn Gln 115 120 125Leu Ser Glu Leu Leu Gly Phe Asp Leu Asn Pro
130 1353124PRTHuman Respiratory Syncytial Virus 3Met Asp Thr Thr
His Asn Asp Thr Thr Pro Gln Arg Leu Met Ile Thr1 5 10 15Asp Met Arg
Pro Leu Ser Leu Glu Thr Ile Ile Thr Ser Leu Thr Arg 20 25 30Asp Ile
Ile Thr His Lys Phe Ile Tyr Leu Ile Asn His Glu Cys Ile 35 40 45Val
Arg Lys Leu Asp Glu Arg Gln Ala Thr Phe Thr Phe Leu Val Asn 50 55
60Tyr Glu Met Lys Leu Leu His Lys Val Gly Ser Thr Lys Tyr Lys Lys65
70 75 80Tyr Thr Glu Tyr Asn Thr Lys Tyr Gly Thr Phe Pro Met Pro Ile
Phe 85 90 95Ile Asn His Asp Gly Phe Leu Glu Cys Ile Gly Ile Lys Pro
Thr Lys 100 105 110His Thr Pro Ile Ile Tyr Lys Tyr Asp Leu Asn Pro
115 1204391PRTHuman Respiratory Syncytial Virus 4Met Ala Pro Ser
Lys Val Lys Leu Asn Asp Thr Leu Asn Lys Asp Gln1 5 10 15Pro Pro Ser
Ser Ser Lys Tyr Thr Ile Gln Arg Ser Thr Gly Asp Ser 20 25 30Thr Asp
Thr Pro Asn Tyr Asp Val Gln Lys His Thr Asn Lys Leu Cys 35 40 45Gly
Met Leu Leu Ile Thr Glu Asp Ala Asn His Lys Phe Thr Gly Leu 50 55
60Ile Gly Met Leu Tyr Ala Met Ser Arg Leu Gly Arg Glu Asp Thr Ile65
70 75 80Lys Ile Leu Lys Asp Ala Gly Tyr His Val Lys Ala Asn Gly Val
Asp 85 90 95Val Thr Thr His Arg Gln Asp Ile Asn Gly Lys Glu Met Lys
Phe Glu 100 105 110Val Leu Thr Leu Ala Ser Leu Thr Thr Glu Ile Gln
Ile Asn Ile Glu 115 120 125Ile Glu Ser Arg Lys Ser Tyr Lys Lys Met
Leu Lys Glu Met Gly Glu 130 135 140Val Ala Pro Glu Tyr Arg His Asp
Ser Pro Asp Cys Gly Met Ile Ile145 150 155 160Leu Cys Ile Ala Ala
Leu Val Ile Thr Lys Leu Ala Ala Gly Asp Arg 165 170 175Ser Gly Leu
Thr Ala Val Ile Arg Arg Ala Asn Asn Val Leu Lys Asn 180 185 190Glu
Met Lys Arg Tyr Lys Gly Leu Leu Pro Lys Asp Ile Ala Asn Ser 195 200
205Phe Tyr Glu Val Phe Glu Lys Tyr Pro His Phe Ile Asp Val Phe Val
210 215 220His Phe Gly Ile Ala Gln Ser Ser Thr Arg Gly Gly Ser Arg
Val Glu225 230 235 240Gly Ile Phe Ala Gly Leu Phe Met Asn Ala Tyr
Gly Ala Gly Gln Val 245 250 255Met Leu Arg Trp Gly Val Leu Ala Lys
Ser Val Lys Asn Ile Met Leu 260 265 270Gly His Ala Ser Val Gln Ala
Glu Met Glu Gln Val Val Glu Val Tyr 275 280 285Glu Tyr Ala Gln Lys
Leu Gly Gly Glu Ala Gly Phe Tyr His Ile Leu 290 295 300Asn Asn Pro
Lys Ala Ser Leu Leu Ser Leu Thr Gln Phe Pro His Phe305 310 315
320Ser Ser Val Val Leu Gly Asn Ala Ala Gly Leu Gly Ile Met Gly Glu
325 330 335Tyr Arg Gly Thr Pro Arg Asn Gln Asp Leu Tyr Asp Ala Ala
Lys Ala 340 345 350Tyr Ala Glu Gln Leu Lys Glu Asn Gly Val Ile Asn
Tyr Ser Val Leu 355 360 365Asp Leu Thr Ala Glu Glu Leu Glu Ala Ile
Lys His Gln Leu Asn Pro 370 375 380Lys Asp Asn Asp Val Glu Leu385
3905241PRTHuman Respiratory Syncytial Virus 5Met Glu Lys Phe Ala
Pro Glu Phe His Gly Glu Asp Ala Asn Asn Arg1 5 10 15Ala Thr Lys Phe
Leu Glu Ser Ile Lys Gly Lys Phe Thr Ser Pro Lys 20 25 30Asp Pro Lys
Lys Lys Asp Ser Ile Ile Ser Val Asn Ser Ile Asp Ile 35 40 45Glu Val
Thr Lys Glu Ser Pro Ile Thr Ser Asn Ser Thr Ile Ile Asn 50 55 60Pro
Ile Asn Glu Thr Asp Asp Thr Val Gly Asn Lys Pro Asn Tyr Gln65 70 75
80Arg Lys Pro Leu Val Ser Phe Lys Glu Asp Pro Thr Pro Ser Asp Asn
85 90 95Pro Phe Ser Lys Leu Tyr Lys Glu Thr Ile Glu Thr Phe Asp Asn
Asn 100 105 110Glu Glu Glu Ser Ser Tyr Ser Tyr Glu Glu Ile Asn Asp
Gln Thr Asn 115 120 125Asp Asn Ile Thr Ala Arg Leu Asp Arg Ile Asp
Glu Lys Leu Ser Glu 130 135 140Ile Leu Gly Met Leu His Thr Leu Val
Val Ala Ser Ala Gly Pro Thr145 150 155 160Ser Ala Arg Asp Gly Ile
Arg Asp Ala Met Val Gly Leu Arg Glu Glu 165 170 175Met Ile Glu Lys
Ile Arg Thr Glu Ala Leu Met Thr Asn Asp Arg Leu 180 185 190Glu Ala
Met Ala Arg Leu Arg Asn Glu Glu Ser Glu Lys Met Ala Lys 195 200
205Asp Thr Ser Asp Glu Val Ser Leu Asn Pro Thr Ser Glu Lys Leu Asn
210 215 220Asn Leu Leu Glu Gly Asn Asp Ser Asp Asn Asp Leu Ser Leu
Glu Asp225 230 235 240Phe6256PRTHuman Respiratory Syncytial Virus
6Met Glu Thr Tyr Val Asn Lys Leu His Glu Gly Ser Thr Tyr Thr Ala1 5
10 15Ala Val Gln Tyr Asn Val Leu Glu Lys Asp Asp Asp Pro Ala Ser
Leu 20 25 30Thr Ile Trp Val Pro Met Phe Gln Ser Ser Met Pro Ala Asp
Leu Leu 35 40 45Ile Lys Glu Leu Ala Asn Val Asn Ile Leu Val Lys Gln
Ile Ser Thr 50 55 60Pro Lys Gly Pro Ser Leu Arg Val Met Ile Asn Ser
Arg Ser Ala Val65 70 75 80Leu Ala Gln Met Pro Ser Lys Phe Thr Ile
Cys Ala Asn Val Ser Leu 85 90 95Asp Glu Arg Ser Lys Leu Ala Tyr Asp
Val Thr Thr Pro Cys Glu Ile 100 105 110Lys Ala Cys Ser Leu Thr Cys
Leu Lys Ser Lys Asn Met Leu Thr Thr 115 120 125Val Lys Asp Leu Thr
Met Lys Thr Leu Asn Pro Thr His Asp Ile Ile 130 135 140Ala Leu Cys
Glu Phe Glu Asn Ile Val Thr Ser Lys Lys Val Ile Ile145 150 155
160Pro Thr Tyr Leu Arg Ser Ile Ser Val Arg Asn Lys Asp Leu Asn Thr
165 170 175Leu Glu Asn Ile Thr Thr Thr Glu Phe Lys Asn Ala Ile Thr
Asn Ala 180 185 190Lys Ile Ile Pro Tyr Ser Gly Leu Leu Leu Val Ile
Thr Val Thr Asp 195 200 205Asn Lys Gly Ala Phe Lys Tyr Ile Lys Pro
Gln Ser Gln Phe Ile Val 210 215 220Asp Leu Gly Ala Tyr Leu Glu Lys
Glu Ser Ile Tyr Tyr Val Thr Thr225 230 235 240Asn Trp Lys His Thr
Ala Thr Arg Phe Ala Ile Lys Pro Met Glu Asp 245 250 255764PRTHuman
Respiratory Syncytial Virus 7Met Glu Asn Thr Ser Ile Thr Ile Glu
Phe Ser Ser Lys Phe Trp Pro1 5 10 15Tyr Phe Thr Leu Ile His Met Ile
Thr Thr Ile Ile Ser Leu Ile Ile 20 25 30Ile Ile Ser Ile Met Ile Ala
Ile Leu Asn Lys Leu Cys Glu Tyr Asn 35 40 45Val Phe His Asn Lys Thr
Phe Glu Leu Pro Arg Ala Arg Val Asn Thr 50 55 608321PRTHuman
Respiratory Syncytial Virus 8Met Ser Lys Thr Lys Asp Gln Arg Thr
Ala Lys Thr Leu Glu Arg Thr1 5 10 15Trp Asp Thr Leu Asn His Leu Leu
Phe Ile Ser Ser Cys Leu Tyr Lys 20 25 30Leu Asn Leu Lys Ser Ile Ala
Gln Ile Thr Leu Ser Ile Leu Ala Met 35 40 45Ile Ile Ser Thr Ser Leu
Ile Ile Ala Ala Ile Ile Phe Ile Ala Ser 50 55 60Ala Asn His Lys Val
Thr Leu Thr Thr Ala Ile Ile Gln Asp Ala Thr65 70 75 80Asn Gln Ile
Lys Asn Thr Thr Pro Thr Tyr Leu Thr Gln Asn Pro Gln 85 90 95Leu Gly
Ile Ser Phe Ser Asn Leu Ser Gly Thr Thr Ser Gln Ser Thr 100 105
110Thr Ile Leu Ala Ser Thr Thr Pro Ser Ala Glu Ser Thr Pro Gln Ser
115 120 125Thr Thr Val Lys Ile Lys Asn Thr Thr Thr Thr Gln Ile Leu
Pro Ser 130 135 140Lys Pro Thr Thr Lys Gln Arg Gln Asn Lys Pro Gln
Asn Lys Pro Asn145 150 155 160Asn Asp Phe His Phe Glu Val Phe Asn
Phe Val Pro Cys Ser Ile Cys 165 170 175Ser Asn Asn Pro Thr Cys Trp
Ala Ile Cys Lys Arg Ile Pro Asn Lys 180 185 190Lys Pro Gly Lys Lys
Thr Thr Thr Lys Pro Thr Lys Lys Pro Thr Leu 195 200 205Lys Thr Thr
Lys Lys Asp Pro Lys Pro Gln Thr Thr Lys Pro Lys Glu 210 215 220Val
Leu Thr Thr Lys Pro Thr Gly Lys Pro Thr Ile Asn Thr Thr Lys225 230
235 240Thr Asn Ile Arg Thr Thr Leu Leu Thr Ser Asn Thr Lys Gly Asn
Pro 245 250 255Glu His Thr Ser Gln Glu Glu Thr Leu His Ser Thr Thr
Ser Glu Gly 260 265 270Tyr Leu Ser Pro Ser Gln Val Tyr Thr Thr Ser
Gly Gln Glu Glu Thr 275 280 285Leu His Ser Thr Thr Ser Glu Gly Tyr
Leu Ser Pro Ser Gln Val Tyr 290 295 300Thr Thr Ser Glu Tyr Leu Ser
Gln Ser Leu Ser Ser Ser Asn Thr Thr305 310 315 320Lys9574PRTHuman
Respiratory Syncytial Virus 9Met Glu Leu Pro Ile Leu Lys Thr Asn
Ala Ile Thr Thr Ile Leu Ala1 5 10 15Ala Val Thr Leu Cys Phe Ala Ser
Ser Gln Asn Ile Thr Glu Glu Phe 20 25 30Tyr Gln Ser Thr Cys Ser Ala
Val Ser Lys Gly Tyr Leu Ser Ala Leu 35 40 45Arg Thr Gly Trp Tyr Thr
Ser Val Ile Thr Ile Glu Leu Ser Asn Ile 50 55 60Lys Glu Asn Lys Cys
Asn Gly Thr Asp Ala Lys Val Lys Leu Ile Lys65 70 75 80Gln Glu Leu
Asp Lys Tyr Lys Asn Ala Val Thr Glu Leu Gln Leu Leu 85 90 95Met Gln
Ser Thr Pro Ala Ala Asn Ser Arg Ala Arg Arg Glu Leu Pro 100 105
110Arg Phe Met Asn Tyr Thr Leu Asn Asn Thr Lys Asn Thr Asn Val Thr
115 120 125Leu Ser Lys Lys Arg Lys Arg Arg Phe Leu Gly Phe Leu Leu
Gly Val 130 135 140Gly Ser Ala Ile Ala Ser Gly Ile Ala Val Ser Lys
Val Leu His Leu145 150 155 160Glu Gly Glu Val Asn Lys Ile Lys Ser
Ala Leu Leu Ser Thr Asn Lys 165 170 175Ala Val Val Ser Leu Ser Asn
Gly Val Ser Val Leu Thr Ser Lys Val 180 185 190Leu Asp Leu Lys Asn
Tyr Ile Asp Lys Gln Leu Leu Pro Ile Val Asn 195 200 205Lys Gln Ser
Cys Ser Ile Ser Asn Ile Glu Thr Val Ile Glu Phe Gln 210 215 220Gln
Lys Asn Asn Arg Leu Leu Glu Ile Thr Arg Glu Phe Ser Val Asn225 230
235 240Ala Gly Val Thr Thr Pro Val Ser Thr Tyr Met Leu Thr Asn Ser
Glu 245 250 255Leu Leu Ser Leu Ile Asn Asp Met Pro Ile Thr Asn Asp
Gln Lys Lys 260 265 270Leu Met Ser Ser Asn Val Gln Ile Val Arg Gln
Gln Ser Tyr Ser Ile 275 280 285Met Ser Ile Ile Lys Glu Glu Val Leu
Ala Tyr Val Val Gln Leu Pro 290 295 300Leu Tyr Gly Val Ile Asp Thr
Pro Cys Trp Lys Leu His Thr Ser Pro305 310 315 320Leu Cys Thr Thr
Asn Thr Lys Glu Gly Ser Asn Ile Cys Leu Thr Arg 325 330 335Thr Asp
Arg Gly Trp Tyr Cys Asp Asn Ala Gly Ser Val Ser Phe Phe 340 345
350Pro Gln Ala Glu Thr Cys Lys Val Gln Ser Asn Arg Val Phe Cys Asp
355 360 365Thr Met Asn Ser Leu Thr Leu Pro Ser Glu Val Asn Leu Cys
Asn Ile 370 375 380Asp Ile Phe Asn Pro Lys Tyr Asp Cys Lys Ile Met
Thr Ser Lys Thr385 390 395 400Asp Val Ser Ser Ser Val Ile Thr Ser
Leu Gly Ala Ile Val Ser Cys 405 410 415Tyr Gly Lys Thr Lys Cys Thr
Ala Ser Asn Lys Asn Arg Gly Ile Ile 420 425 430Lys Thr Phe Ser Asn
Gly Cys Asp Tyr Val Ser Asn Lys Gly Val Asp 435 440 445Thr Val Ser
Val Gly Asn Thr Leu Tyr Tyr Val Asn Lys Gln Glu Gly 450 455 460Lys
Ser Leu Tyr Val Lys Gly Glu Pro Ile Ile Asn Phe Tyr Asp Pro465 470
475 480Leu Val Phe Pro Ser Asp Glu Phe Asp Ala Ser Ile Ser Gln Val
Asn 485 490 495Glu Lys Ile Asn Gln Ser Leu Ala Phe Ile Arg Lys Ser
Asp Glu Leu 500 505 510Leu His Asn Val Asn Ala Gly Lys Ser Thr Thr
Asn Ile Met Ile Thr 515 520 525Thr Ile Ile Ile Val Ile Ile Val Ile
Leu Leu Ala Leu Ile Ala Val 530 535 540Gly Leu Leu Leu Tyr Cys Lys
Ala Arg Ser Thr Pro Val Thr Leu Gly545 550 555 560Lys Asp Gln Leu
Ser Gly Ile Asn Asn Ile Ala Phe Asn Asn 565 57010194PRTHuman
Respiratory Syncytial Virus 10Met Ser Arg Arg Asn Pro Cys Lys Phe
Glu Ile Arg Gly His Cys Leu1 5 10 15Asn Gly Lys Arg Cys His Phe Ser
His Asn Tyr Phe Glu Trp Pro Pro 20 25 30His Ala Leu Leu Val Arg Gln
Asn Phe Met Leu Asn Arg Ile Leu Lys 35 40 45Ser Met Asp Lys Ser Ile
Asp Thr Leu Ser Glu Ile Ser Gly Ala Ala 50 55 60Glu Leu Asp Arg Thr
Glu Glu Tyr Ala Leu Gly Val Val Gly Val Leu65 70 75 80Glu Ser Tyr
Ile Gly Ser Ile Asn Asn Ile Thr Lys Gln Ser Ala Cys 85 90 95Val Ala
Met Ser Lys Leu Leu Thr Glu Leu Asn Ser Asp Asp Ile Lys 100 105
110Lys Leu Arg Asp Asn Glu Glu Pro Asn Ser Pro Lys Val Arg Val Tyr
115 120 125Asn Thr Val Ile Ser Tyr Ile Glu Ser Asn Arg Lys Asn Asn
Lys Gln 130 135 140Thr Ile His Leu Leu Lys Arg Leu Pro Ala Asp Val
Leu Lys Lys Thr145 150 155 160Ile Lys Asn Thr Leu Asp Ile His Lys
Ser Ile Thr Ile Asn Asn Pro 165 170 175Lys Glu Ser Thr Val Ser Asp
Thr Asn Asp His Ala Lys Asn Asn Asp 180 185 190Thr Thr1188PRTHuman
Respiratory Syncytial Virus 11Met Pro Lys Ile Met Ile Leu Pro Asp
Lys Tyr Pro Cys Ser Ile Asn1 5 10 15Ser Ile Leu Ile Thr Ser Asn Cys
Arg Val Thr Met Tyr Asn Gln Lys 20 25 30Asn Thr Leu Tyr Ile Asn Gln
Asn Asn Gln Asn Asn His Ile Tyr Pro 35 40 45Pro Asp Gln Pro Phe Asn
Glu Ile His Trp Thr Ser Gln Asp Leu Ile 50 55 60Asp Ala Thr Gln Asn
Phe Leu Gln His Leu Gly Ile Thr Asp Asp Ile65 70 75
80Tyr Thr Ile Tyr Ile Leu Val Ser 85122165PRTHuman Respiratory
Syncytial Virus 12Met Asp Pro Ile Ile Ser Gly Asn Ser Ala Asn Val
Tyr Leu Thr Asp1 5 10 15Ser Tyr Leu Lys Gly Val Ile Ser Phe Ser Glu
Cys Asn Ala Leu Gly 20 25 30Ser Tyr Ile Phe Asn Gly Pro Tyr Leu Lys
Asn Asp Tyr Thr Asn Leu 35 40 45Ile Ser Arg Gln Asn Pro Leu Ile Glu
His Ile Asn Leu Lys Lys Leu 50 55 60Asn Ile Thr Gln Ser Leu Ile Ser
Lys Tyr His Lys Gly Glu Ile Lys65 70 75 80Ile Glu Glu Pro Thr Tyr
Phe Gln Ser Leu Leu Met Thr Tyr Lys Ser 85 90 95Met Thr Ser Ser Glu
Gln Thr Thr Thr Thr Asn Leu Leu Lys Lys Ile 100 105 110Ile Arg Arg
Ala Ile Glu Ile Ser Asp Val Lys Val Tyr Ala Ile Leu 115 120 125Asn
Lys Leu Gly Leu Lys Glu Lys Asp Lys Ile Lys Ser Asn Asn Gly 130 135
140Gln Asp Glu Asp Asn Ser Val Ile Thr Thr Ile Ile Lys Asp Asp
Ile145 150 155 160Leu Leu Ala Val Lys Asp Asn Gln Ser His Leu Lys
Ala Asp Lys Asn 165 170 175Gln Ser Thr Lys Gln Lys Asp Thr Ile Lys
Thr Thr Leu Leu Lys Lys 180 185 190Leu Met Cys Ser Met Gln His Pro
Pro Ser Trp Leu Ile His Trp Phe 195 200 205Asn Leu Tyr Thr Lys Leu
Asn Ser Ile Leu Thr Gln Tyr Arg Ser Ser 210 215 220Glu Val Lys Asn
His Gly Phe Ile Leu Ile Asp Asn His Thr Leu Ser225 230 235 240Gly
Phe Gln Phe Ile Leu Asn Gln Tyr Gly Cys Ile Val Tyr His Lys 245 250
255Glu Leu Lys Arg Ile Thr Val Thr Thr Tyr Asn Gln Phe Leu Thr Trp
260 265 270Lys Asp Ile Ser Leu Ser Arg Leu Asn Val Cys Leu Ile Thr
Trp Ile 275 280 285Ser Asn Cys Leu Asn Thr Leu Asn Lys Ser Leu Gly
Leu Arg Cys Gly 290 295 300Phe Asn Asn Val Ile Leu Thr Gln Leu Phe
Leu Tyr Gly Asp Cys Ile305 310 315 320Leu Lys Leu Phe His Asn Glu
Gly Phe Tyr Ile Ile Lys Glu Ile Glu 325 330 335Gly Phe Ile Met Ser
Leu Ile Leu Asn Ile Thr Glu Glu Asp Gln Phe 340 345 350Arg Lys Arg
Phe Tyr Asn Ser Met Leu Asn Asn Ile Thr Asp Ala Ala 355 360 365Asn
Lys Ala Gln Lys Asn Leu Leu Ser Arg Val Cys His Thr Leu Leu 370 375
380Asp Lys Thr Ile Ser Asp Asn Ile Ile Asn Gly Arg Trp Ile Ile
Leu385 390 395 400Leu Ser Lys Phe Leu Lys Leu Ile Lys Leu Ala Gly
Asp Asn Asn Leu 405 410 415Asn Asn Leu Ser Glu Leu Tyr Phe Leu Phe
Arg Ile Phe Gly His Pro 420 425 430Met Val Asp Glu Arg Gln Ala Met
Asp Ala Val Lys Val Asn Cys Asn 435 440 445Glu Thr Lys Phe Tyr Leu
Leu Ser Ser Leu Ser Met Leu Arg Gly Ala 450 455 460Phe Ile Tyr Arg
Ile Ile Lys Gly Phe Val Asn Asn Tyr Asn Arg Trp465 470 475 480Pro
Thr Leu Arg Asn Ala Ile Val Leu Pro Leu Arg Trp Leu Thr Tyr 485 490
495Tyr Lys Leu Asn Thr Tyr Pro Ser Leu Leu Glu Leu Thr Glu Arg Asp
500 505 510Leu Ile Val Leu Ser Gly Leu Arg Phe Tyr Arg Glu Phe Arg
Leu Pro 515 520 525Lys Lys Val Asp Leu Glu Met Ile Ile Asn Asp Lys
Ala Ile Ser Pro 530 535 540Pro Lys Asn Leu Ile Trp Thr Ser Phe Pro
Arg Asn Tyr Met Pro Ser545 550 555 560His Ile Gln Asn Tyr Ile Glu
His Glu Lys Leu Lys Phe Ser Asp Ser 565 570 575Asp Lys Ser Arg Arg
Val Leu Glu Tyr Tyr Leu Arg Asp Asn Lys Phe 580 585 590Asn Glu Cys
Asp Leu His Asn Cys Val Val Asn Gln Ser Tyr Leu Asn 595 600 605Asn
Pro Asn His Val Val Ser Leu Thr Gly Lys Glu Arg Glu Leu Ser 610 615
620Val Gly Arg Met Phe Ala Met Gln Pro Gly Met Phe Arg Gln Val
Gln625 630 635 640Ile Leu Ala Glu Lys Met Ile Ala Glu Asn Ile Leu
Gln Phe Phe Pro 645 650 655Glu Ser Leu Thr Arg Tyr Gly Asp Leu Glu
Leu Gln Lys Ile Leu Glu 660 665 670Leu Lys Ala Gly Ile Ser Asn Lys
Ser Asn Arg Tyr Asn Asp Asn Tyr 675 680 685Asn Asn Tyr Ile Ser Lys
Cys Ser Ile Ile Thr Asp Leu Ser Lys Phe 690 695 700Asn Gln Ala Phe
Arg Tyr Glu Thr Ser Cys Ile Cys Ser Asp Val Leu705 710 715 720Asp
Glu Leu His Gly Val Gln Ser Leu Phe Ser Trp Leu His Leu Thr 725 730
735Ile Pro His Val Thr Ile Ile Cys Thr Tyr Arg His Ala Pro Pro Tyr
740 745 750Ile Lys Asp His Ile Val Asp Leu Asn Asn Val Asp Glu Gln
Ser Gly 755 760 765Leu Tyr Arg Tyr His Met Gly Gly Ile Glu Gly Trp
Cys Gln Lys Leu 770 775 780Trp Thr Ile Glu Ala Ile Ser Leu Leu Asp
Leu Ile Ser Leu Lys Gly785 790 795 800Lys Phe Ser Ile Thr Ala Leu
Ile Asn Gly Asp Asn Gln Ser Ile Asp 805 810 815Ile Ser Lys Pro Val
Arg Leu Met Glu Gly Gln Thr His Ala Gln Ala 820 825 830Asp Tyr Leu
Leu Ala Leu Asn Ser Leu Lys Leu Leu Tyr Lys Glu Tyr 835 840 845Ala
Gly Ile Gly His Lys Leu Lys Gly Thr Glu Thr Tyr Ile Ser Arg 850 855
860Asp Met Gln Phe Met Ser Lys Thr Ile Gln His Asn Gly Val Tyr
Tyr865 870 875 880Pro Ala Ser Ile Lys Lys Val Leu Arg Val Gly Pro
Trp Ile Asn Thr 885 890 895Ile Leu Asp Asp Phe Lys Val Ser Leu Glu
Ser Ile Gly Ser Leu Thr 900 905 910Gln Glu Leu Glu Tyr Arg Gly Glu
Ser Leu Leu Cys Ser Leu Ile Phe 915 920 925Arg Asn Val Trp Leu Tyr
Asn Gln Ile Ala Leu Gln Leu Lys Asn His 930 935 940Ala Leu Cys Asn
Asn Lys Leu Tyr Leu Asp Ile Leu Lys Val Leu Lys945 950 955 960His
Leu Lys Thr Phe Phe Asn Leu Asp Asn Ile Asp Thr Ala Leu Thr 965 970
975Leu Tyr Met Asn Leu Pro Met Leu Phe Gly Gly Gly Asp Pro Asn Leu
980 985 990Leu Tyr Arg Ser Phe Tyr Arg Arg Thr Pro Asp Phe Leu Thr
Glu Ala 995 1000 1005Ile Val His Ser Val Phe Ile Leu Ser Tyr Tyr
Thr Asn His Asp 1010 1015 1020Leu Lys Asp Lys Leu Gln Asp Leu Ser
Asp Asp Arg Leu Asn Lys 1025 1030 1035Phe Leu Thr Cys Ile Ile Thr
Phe Asp Lys Asn Pro Asn Ala Glu 1040 1045 1050Phe Val Thr Leu Met
Arg Asp Pro Gln Ala Leu Gly Ser Glu Arg 1055 1060 1065Gln Ala Lys
Ile Thr Ser Glu Ile Asn Arg Leu Ala Val Thr Glu 1070 1075 1080Val
Leu Ser Thr Ala Pro Asn Lys Ile Phe Ser Lys Ser Ala Gln 1085 1090
1095His Tyr Thr Thr Thr Glu Ile Asp Leu Asn Asp Ile Met Gln Asn
1100 1105 1110Ile Glu Pro Thr Tyr Pro His Gly Leu Arg Val Val Tyr
Glu Ser 1115 1120 1125Leu Pro Phe Tyr Lys Ala Glu Lys Ile Val Asn
Leu Ile Ser Gly 1130 1135 1140Thr Lys Ser Ile Thr Asn Ile Leu Glu
Lys Thr Ser Ala Ile Asp 1145 1150 1155Leu Thr Asp Ile Asp Arg Ala
Thr Glu Met Met Arg Lys Asn Ile 1160 1165 1170Thr Leu Leu Ile Arg
Ile Leu Pro Leu Asp Cys Asn Arg Asp Lys 1175 1180 1185Arg Glu Ile
Leu Ser Met Glu Asn Leu Ser Ile Thr Glu Leu Ser 1190 1195 1200Lys
Tyr Val Arg Glu Arg Ser Trp Ser Leu Ser Asn Ile Val Gly 1205 1210
1215Val Thr Ser Pro Ser Ile Met Tyr Thr Met Asp Ile Lys Tyr Thr
1220 1225 1230Thr Ser Thr Ile Ala Ser Gly Ile Ile Ile Glu Lys Tyr
Asn Val 1235 1240 1245Asn Ser Leu Thr Arg Gly Glu Arg Gly Pro Thr
Lys Pro Trp Val 1250 1255 1260Gly Ser Ser Thr Gln Glu Lys Lys Thr
Met Pro Val Tyr Asn Arg 1265 1270 1275Gln Val Leu Thr Lys Lys Gln
Arg Asp Gln Ile Asp Leu Leu Ala 1280 1285 1290Lys Leu Asp Trp Val
Tyr Ala Ser Ile Asp Asn Lys Asp Glu Phe 1295 1300 1305Met Glu Glu
Leu Ser Ile Gly Thr Leu Gly Leu Thr Tyr Glu Lys 1310 1315 1320Ala
Lys Lys Leu Phe Pro Gln Tyr Leu Ser Val Asn Tyr Leu His 1325 1330
1335Arg Leu Thr Val Ser Ser Arg Pro Cys Glu Phe Pro Ala Ser Ile
1340 1345 1350Pro Ala Tyr Arg Thr Thr Asn Tyr His Phe Asp Thr Ser
Pro Ile 1355 1360 1365Asn Arg Ile Leu Thr Glu Lys Tyr Gly Asp Glu
Asp Ile Asp Ile 1370 1375 1380Val Phe Gln Asn Cys Ile Ser Phe Gly
Leu Ser Leu Met Ser Val 1385 1390 1395Val Glu Gln Phe Thr Asn Val
Cys Pro Asn Arg Ile Ile Leu Ile 1400 1405 1410Pro Lys Leu Asn Glu
Ile His Leu Met Lys Pro Pro Ile Phe Thr 1415 1420 1425Gly Asp Val
Asp Ile His Lys Leu Lys Gln Val Ile Gln Lys Gln 1430 1435 1440His
Met Phe Leu Pro Asp Lys Ile Ser Leu Thr Gln Tyr Val Glu 1445 1450
1455Leu Phe Leu Ser Asn Lys Thr Leu Lys Ser Gly Ser Asn Val Asn
1460 1465 1470Ser Asn Leu Ile Leu Ala His Lys Ile Ser Asp Tyr Phe
His Asn 1475 1480 1485Thr Tyr Ile Leu Ser Thr Asn Leu Ala Gly His
Trp Ile Leu Ile 1490 1495 1500Ile Gln Leu Met Lys Asp Ser Lys Gly
Ile Phe Glu Lys Asp Trp 1505 1510 1515Gly Glu Gly Tyr Ile Thr Asp
His Met Phe Ile Asn Leu Lys Val 1520 1525 1530Phe Phe Asn Ala Tyr
Lys Thr Tyr Leu Leu Cys Phe His Lys Gly 1535 1540 1545Tyr Gly Arg
Ala Lys Leu Glu Cys Asp Met Asn Thr Ser Asp Leu 1550 1555 1560Leu
Cys Val Leu Glu Leu Ile Asp Ser Ser Tyr Trp Lys Ser Met 1565 1570
1575Ser Lys Val Phe Leu Glu Gln Lys Val Ile Lys Tyr Ile Leu Ser
1580 1585 1590Gln Asp Ala Ser Leu His Arg Val Lys Gly Cys His Ser
Phe Lys 1595 1600 1605Leu Trp Phe Leu Lys Arg Leu Asn Val Ala Glu
Phe Thr Val Cys 1610 1615 1620Pro Trp Val Val Asn Ile Asp Tyr His
Pro Thr His Met Lys Ala 1625 1630 1635Ile Leu Thr Tyr Ile Asp Leu
Val Arg Met Gly Leu Ile Asn Ile 1640 1645 1650Asp Arg Ile Tyr Ile
Lys Asn Lys His Lys Phe Asn Asp Glu Phe 1655 1660 1665Tyr Thr Ser
Asn Leu Phe Tyr Ile Asn Tyr Asn Phe Ser Asp Asn 1670 1675 1680Thr
His Leu Leu Thr Lys His Ile Arg Ile Ala Asn Ser Glu Leu 1685 1690
1695Glu Ser Asn Tyr Asn Lys Leu Tyr His Pro Thr Pro Glu Thr Leu
1700 1705 1710Glu Asn Ile Leu Thr Asn Pro Val Lys Ser Asn Gly Lys
Lys Thr 1715 1720 1725Leu Ser Asp Tyr Cys Ile Gly Lys Asn Val Asp
Ser Ile Met Leu 1730 1735 1740Pro Ser Leu Ser Asn Lys Lys Leu Ile
Lys Ser Ser Thr Met Ile 1745 1750 1755Arg Thr Asn Cys Ser Arg Gln
Asp Leu Tyr Asn Leu Phe Pro Thr 1760 1765 1770Val Val Ile Asp Lys
Ile Ile Asp His Ser Gly Asn Thr Ala Lys 1775 1780 1785Ser Asn Gln
Leu Tyr Thr Thr Thr Ser His Gln Ile Ser Leu Val 1790 1795 1800His
Asn Ser Thr Ser Leu Tyr Cys Met Leu Pro Trp His His Ile 1805 1810
1815Asn Arg Phe Asn Phe Val Phe Ser Ser Thr Gly Cys Lys Ile Ser
1820 1825 1830Ile Glu Tyr Ile Leu Lys Asp Leu Lys Ile Lys Asp Pro
Asn Cys 1835 1840 1845Ile Ala Phe Ile Gly Glu Gly Ala Gly Asn Leu
Leu Leu Arg Thr 1850 1855 1860Val Val Glu Leu His Pro Asp Ile Arg
Tyr Ile Tyr Arg Ser Leu 1865 1870 1875Lys Asp Cys Asn Asp His Ser
Leu Pro Ile Glu Phe Leu Arg Leu 1880 1885 1890Tyr Asn Gly His Ile
Asn Ile Asp Tyr Gly Glu Asn Leu Thr Ile 1895 1900 1905Pro Ala Thr
Asp Ala Thr Asn Asn Ile His Trp Ser Tyr Leu His 1910 1915 1920Ile
Lys Phe Ala Glu Pro Ile Ser Leu Phe Val Cys Asp Ala Glu 1925 1930
1935Leu Pro Val Thr Val Asn Trp Ser Lys Ile Ile Ile Glu Trp Ser
1940 1945 1950Lys His Val Arg Lys Cys Lys Tyr Cys Ser Ser Val Asn
Lys Cys 1955 1960 1965Thr Leu Ile Val Lys Tyr His Ala Gln Asp Asp
Ile Asp Phe Lys 1970 1975 1980Leu Asp Asn Ile Thr Ile Leu Lys Thr
Tyr Val Cys Leu Gly Ser 1985 1990 1995Lys Leu Lys Gly Ser Glu Val
Tyr Leu Val Leu Thr Ile Gly Pro 2000 2005 2010Ala Asn Val Phe Pro
Val Phe Asn Val Ala Gln Asn Ala Lys Leu 2015 2020 2025Ile Leu Ser
Arg Thr Lys Asn Phe Ile Met Pro Lys Lys Ala Asp 2030 2035 2040Lys
Glu Ser Ile Asp Ala Asn Ile Lys Ser Leu Ile Pro Phe Leu 2045 2050
2055Cys Tyr Pro Ile Thr Lys Lys Gly Ile Asn Thr Ala Leu Ser Lys
2060 2065 2070Leu Lys Ser Val Val Ser Gly Asp Ile Leu Ser Tyr Ser
Ile Ala 2075 2080 2085Gly Arg Asn Glu Val Phe Ser Asn Lys Leu Ile
Asn His Lys His 2090 2095 2100Met Asn Ile Leu Lys Trp Phe Asn His
Val Leu Asn Phe Arg Ser 2105 2110 2115Thr Glu Leu Asn Tyr Asn His
Leu Tyr Met Val Glu Ser Thr Tyr 2120 2125 2130Pro His Leu Ser Glu
Leu Leu Asn Ser Leu Thr Thr Asn Glu Leu 2135 2140 2145Lys Lys Leu
Ile Lys Ile Thr Gly Ser Leu Leu Tyr Asn Phe Tyr 2150 2155 2160Asn
Glu 2165
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