U.S. patent application number 16/377019 was filed with the patent office on 2019-10-03 for artificial forisome bodies with seo-f fusion proteins, plant or yeast cells with vectors for encoding these proteins and vectors.
The applicant listed for this patent is Fraunhofer-Gesellschaft zur Foerderung der angewandten Forschung e.V.. Invention is credited to Rainer Fischer, Boje Mueller, Dirk Pruefer.
Application Number | 20190300586 16/377019 |
Document ID | / |
Family ID | 48446274 |
Filed Date | 2019-10-03 |
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United States Patent
Application |
20190300586 |
Kind Code |
A1 |
Mueller; Boje ; et
al. |
October 3, 2019 |
ARTIFICIAL FORISOME BODIES WITH SEO-F FUSION PROTEINS, PLANT OR
YEAST CELLS WITH VECTORS FOR ENCODING THESE PROTEINS AND VECTORS
FOR ENCODING SEO-F FUSION PROTEINS
Abstract
Artificial forisome bodies include a fusion protein of at least
one SEO-F protein or an at least 50-amino acid portion of an SEO-F
protein, and at least one additional protein or peptide, with the
exception of GFP and the Venus protein. The additional protein or
peptide has a mass of at most 30 kDa, or the forisome body further
includes an unfused SEO-F protein or a form of the protein having
C-terminal deletions of up to 45 amino acids and/or N-terminal
deletions of up to 13 amino acids, in which the unfused SEO-F
protein is a protein capable of forming homomeric forisome bodies
in the absence of additional SEO-F proteins.
Inventors: |
Mueller; Boje; (Muenster,
DE) ; Pruefer; Dirk; (Muenster, DE) ; Fischer;
Rainer; (Aachen, DE) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
Fraunhofer-Gesellschaft zur Foerderung der angewandten Forschung
e.V. |
Muenchen |
|
DE |
|
|
Family ID: |
48446274 |
Appl. No.: |
16/377019 |
Filed: |
April 5, 2019 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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14399472 |
Nov 6, 2014 |
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PCT/EP2013/059190 |
May 2, 2013 |
|
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16377019 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
C12N 9/1205 20130101;
C12Y 101/01049 20130101; C07K 14/445 20130101; C07K 2319/00
20130101; C12Y 207/01001 20130101; C12N 9/92 20130101; C12Y
503/01009 20130101; C12N 9/0006 20130101; C07K 14/415 20130101;
C12N 15/8242 20130101 |
International
Class: |
C07K 14/415 20060101
C07K014/415; C12N 9/04 20060101 C12N009/04; C12N 9/92 20060101
C12N009/92; C12N 9/12 20060101 C12N009/12; C07K 14/445 20060101
C07K014/445 |
Foreign Application Data
Date |
Code |
Application Number |
May 9, 2012 |
EP |
12167377.6 |
Claims
1. An artificial forisome body comprising a fusion protein of (A) a
SEO-F (Sieve Element Occlusion by Forisome) protein having an amino
acid sequence of SEQ ID NO: 4, 5, 6, 7 or 8, or a fragment of the
amino acid sequence of SEQ ID NO: 4, 5, 6, 7 or 8, wherein said
fragment results from deleting up to 45 amino acids from the
C-terminus and/or up to 13 amino acids from the N-terminus of the
amino acid sequence of SEQ ID NO: 4, 5, 6, 7 or 8, and (B) at least
one additional protein, wherein the at least one additional protein
is not a fluorescent protein, (a) wherein the additional protein
has a mass of at most 30 kDa, and wherein the artificial forisome
body does not contain an unfused SEO-F protein or an unfused SEO-F
protein having C-terminal deletions of up to 45 amino acids and/or
N-terminal deletions of up to 13 amino acids, or (b) wherein the
forisome body further comprises an unfused SEO-F protein, wherein
said unfused SEO-F protein is (i) a protein having the amino acid
sequence of SEQ ID NO: 4, 5, 6, 7 or 8, or (ii) a protein
comprising a fragment of the amino acid sequence of SEQ ID NO: 4,
5, 6, 7 or 8, wherein said fragment results from deleting up to 45
amino acids from the C-terminus and/or up to 13 amino acids from
the N-terminus of the amino acid sequence of SEQ ID NO: 4, 5, 6, 7
or 8, and wherein the unfused SEO-F protein has ability to form
homomeric forisome bodies in the absence of additional SEO-F
proteins.
2. The artificial forisome body according to claim 1, with the
exception of forisome bodies that are comprised entirely or partly
of a fusion protein that contains an artificial fluorescent variant
or a portion of a fluorescent portion of a green fluorescent
protein (GFP) or Venus protein.
3. The artificial forisome body according to claim 1, wherein the
artificial forisome body comprises a fusion protein of (A) a SEO-F
(Sieve Element Occlusion by Forisome) protein having the amino acid
sequence of SEQ ID NO: 4, or a fragment of the amino acid sequence
of SEQ ID NO: 4, wherein said fragment results from deleting up to
45 amino acids from the C-terminus and/or up to 13 amino acids from
the N-terminus of the amino acid sequence of SEQ ID NO: 4, and (B)
the at least one additional protein.
4. The artificial forisome body according to claim 1, wherein the
additional protein is selected from the group consisting of
proteins that contribute to metabolism, proteins capable of
triggering an immune response and/or proteins having a therapeutic
benefit, and proteins that are useful for biotechnological
applications.
5. The artificial forisome body according to claim 1, wherein the
additional protein is selected from the group consisting of
enzymes, antibodies, and antigens, wherein the additional protein
can be immobilized on a substrate due to their affinity reaction
with a substrate-bound biological or biochemically produced
material.
6. The artificial forisome body according to claim 1, wherein the
fusion protein contains an enzyme fused to the N-terminal end of
the SEO-F protein or a portion thereof, or wherein the fusion
protein comprises a protein that has a therapeutic benefit or is
useful for biotechnological applications, and which is fused to the
C-terminal end of the SEO-F protein or portion thereof.
7. The artificial forisome body according to claim 1, comprising at
least two fusion proteins, each comprising an enzyme, such that a
product of a reaction of one substrate with a first of said enzymes
can serve as a substrate for a second of said enzymes.
8. A plant cell or yeast cell comprising: a first vector encoding a
fusion protein of at least one SEO-F protein or a portion thereof
comprising at least 50 amino acids and at least one additional
protein, with the exception of a green fluorescent protein (GFP)
and Venus protein and artificial fluorescent variants or
fluorescent portions of the GFP protein or the Venus protein, and
optionally a second vector encoding a SEO-F protein or a form of
said protein having C-terminal deletions of up to 45 amino acids
and/or N-terminal deletions of up to 13 amino acids, wherein the
SEO-F protein is capable of forming forisome bodies in the absence
of further homomeric SEO-F proteins, with the proviso that
optionally any number of the four cysteines that are located in the
native SEO-F proteins in the C-terminal region between aa 600 and
aa 670, may be replaced by amino acids that are not capable for
forming an SS-bond.
9. The plant cell or yeast cell according to claim 8, wherein the
additional protein has a mass of at most 30 kDa.
10. The plant cell or yeast cell according to claim 8, wherein the
additional protein is a portion of a second SEO-F protein, with the
proviso that one of the two SEO-F proteins in unfused form is
capable of forming homomeric forisome bodies and the fusion protein
is comprised of an N-terminal SEO-F protein portion and a
C-terminal SEO-F protein portion, wherein the portions represent an
SEO-F protein that is complete or C-terminally deleted by up to
approximately 50 amino acids and/or N-terminally by up to 13 amino
acids.
11. The plant cell or yeast cell according to claim 8, wherein the
additional protein is selected from the group consisting of
proteins that contribute to metabolism, proteins capable of
triggering an immune response and/or proteins having a therapeutic
benefit, and proteins that are useful for biotechnological
applications.
12. The plant cell or yeast cell according to claim 8, wherein the
additional protein is selected from the group consisting of
enzymes, antibodies, and antigens, wherein the additional protein
can be immobilized on a substrate due to their affinity reaction
with a substrate-bound biological or biochemically produced
material.
13. The plant cell or yeast cell according to claim 8, wherein the
fusion protein comprises an enzyme which is fused to the N-terminal
end of the SEO-F protein or a portion thereof, or wherein the
fusion protein comprises a protein that has a therapeutic benefit
or is useful for biotechnological applications, and is fused to the
C-terminal end of the SEO-F protein or portion thereof.
14. The plant cell or yeast cell according to claim 8, wherein the
first vector encodes a fusion protein comprising an amino acid
sequence of a first enzyme, characterized in that the cell contains
at least one further vector encoding a fusion protein comprising
the amino acid sequence of a second enzyme, wherein a reaction
product of a substrate with the first enzyme is suitable as a
substrate for the second enzyme.
15. A vector capable of being amplified in the yeast cell according
to claim 8, comprising a region encoding a fusion protein comprised
of at least one SEO-F protein or a portion thereof comprising at
least 50 amino acids and at least one further protein or peptide,
with the exception of the GFP and the Venus protein.
16. The vector according to claim 15, wherein the additional
protein is selected from the group consisting of proteins that
contribute to metabolism, proteins capable of triggering an immune
response and/or proteins having a therapeutic benefit, and proteins
that are useful for biotechnological applications.
17. The vector according to claim 15, wherein the additional
protein or peptide is selected from the group consisting of
enzymes, antibodies, and antigens, wherein the additional protein
can be immobilized on a substrate due to their affinity reaction
with a substrate-bound biological or biochemically produced
material.
18. The vector according to claim 15, wherein the fusion protein
comprises an enzyme fused to the N-terminal end of the SEO-F
protein or a portion thereof, or wherein the fusion protein
comprises a protein that has a therapeutic benefit or can be used
for biotechnological applications, and is fused to the C-terminal
end of the SEO-F protein or the portion thereof.
19. A method for producing an artificial forisome body comprising a
fusion protein of at least one SEO-F (Sieve Element Occlusion by
Forisome) protein or an at least 50-amino acid portion thereof, and
at least one additional protein, with the exception of a green
fluorescent protein (GFP) and Venus protein, wherein (a) the
additional protein or peptide has a mass of at most 30 kDa, and the
artificial forisome body does not contain an unfused SEO-F protein
or a form of said protein having C-terminal deletions of up to 45
amino acids and/or N-terminal deletions of up to 13 amino acids, or
(b) the forisome body further comprises an unfused SEO-F protein or
a form of said protein having C-terminal deletions of up to 45
amino acids and/or N-terminal deletions of up to 13 amino acids,
wherein the unfused SEO-F protein is selected from proteins having
the capability of forming homomeric forisome bodies in the absence
of additional SEO-F proteins, or (c) the further protein or peptide
is a portion of a second SEO-F protein, with the proviso that one
of the two SEO-F proteins in its unfused form is capable of forming
homomeric forisome bodies, and the fusion protein is comprised of
an N-terminal SEO-F protein portion and a C-terminal SEO-F protein
portion, wherein the portions represent an SEO-F protein that is
complete or C-terminally deleted by up to 50 amino acids and/or
N-terminally deleted by up to 13 amino acids, with the proviso that
optionally any number of the four cysteines located in the
C-terminal portion between aa 600 and aa 670 of the native SEO-F
proteins, may be replaced by amino acids that are not capable of
forming an SS-bond.
20. The method according to claim 19, wherein the fusion protein
does not contain any artificial fluorescent variant and no
fluorescent portion of the GFP protein or the Venus fluorescent
protein.
21. The artificial forisome body according to claim 2, with the
exception of forisome bodies that are composed exclusively or
partly of a fluorescent fusion protein.
22. The method according to claim 20, wherein the fusion protein
does not comprise fluorescent protein portions.
Description
INCORPORATION BY REFERENCE TO ANY PRIORITY APPLICATIONS
[0001] Any and all applications for which a foreign or domestic
priority claim is identified in the Application Data Sheet as filed
with the present application are hereby incorporated by reference
under 37 CFR 1.57.
SEQUENCE LISTING IN ELECTRONIC FORMAT
[0002] The present application is being filed along with an
Electronic Sequence Listing as an ASCII text file via EFS-Web. The
Electronic Sequence Listing is provided as a file entitled
2019-04-02_SEQ-SWKC001001C1.txt created and last saved on Apr. 5,
2019, which is approximately 57 kilobytes in size. The information
in the Electronic Sequence Listing is incorporated herein by
reference in its entirety in accordance with 35 U.S.C. .sctn.
1.52(e).
BACKGROUND OF THE INVENTION
Field of the Invention
[0003] The present invention relates to artificial forisome bodies
having properties useful protein-chemistry, plant cells and yeast
cells with a combination of vectors that enable formation and
isolation of said forisome bodies in the cell, and novel vectors
encoding SEO-F fusion proteins.
Description of the Related Art
[0004] Forisomes are plant protein bodies (mechanoproteins), which
are found exclusively in the phloem of plants of the Fabaceae
family (legumes). They are located in the sieve plates of the
phloem system. When the phloem is wounded, forisomes undergo a
calcium-dependent conformational change that converts them from a
condensed state to a thickened, dispersed state that allows them to
plug the sieve elements and prevent the loss of valuable sugar
molecules. Forisomes exist as fibrillar substructures packed into
large, compact bundles. In vitro, divalent cations, pH changes, or
electrical stimuli can trigger forisomes to undergo numerous
ATP-independent repeatable cycles of contractions and alternating
expansions.
[0005] A forisome is comprised of several million subunits. These
subunits are homologous proteins that, according to their function,
are named "Sieve Element Occlusion by Forisomes" (SEO-F). The
thesis by Gundula Noll (2005) describes expression of several genes
that code for these proteins using bacterial expression vectors. It
was determined that in Medicago trunculata at least four subunits
(SEO-F1 to SEO-F4) exist (G. Noll et al., Plant Mol. Biol.
65:285-294 (2007), HC Pelissier et al., Plant Cell Physiol.
49:1699-1710 (2008)). All four subunits have meanwhile been
sequenced; their sequences are shown as SEQ-ID NO: 1-4 in Sequence
Listing. The sequences of SEO-F1 proteins of the species Dipteryx
panamensis, Lotus japonicus, Pisum sativum and Vicia faba are shown
as SEQ-ID NO: 5-8 in Sequence Listing. In plants, the different
SEO-F proteins assemble to forisome protein bodies. Expression of
the corresponding genes in foreign organisms (tobacco plants,
yeast) has meanwhile demonstrated that in Medicago trunculata each
of the two sub-units, namely SEO-F1 and SEO-F4, assemble into
homomeric artificial forisomes in the absence of other subunits,
see G. Noll et al., Bioengineered Bugs 2:2, 1-4 (2011), 2011 Landes
Bioscience. The SEO-F2 subunit, in contrast, cannot assemble into
homomeric forisomes, but can co-assemble both with the SEO-F1
subunit as well as with the SEO-F4 subunit.
[0006] Some SEO-F fusion proteins have previously been generated
for analytical purposes. Accordingly, G. Noll performed forisome
gene-enzyme coupling in the context of her dissertation (2005) for
the purpose of producing antibodies in E. coli. However, formation
of forisome bodies was hereby not detectable. H. C. Pelissier et
al. describe loc. cit. a fusion protein consisting of a forisome
subunit and the green fluorescent protein (GFP) that allowed them
to demonstrate the assembly of this subunit to a forisome body in
transgenic plants in which the fusion protein was stored. In Appl.
Microbiol. Biotechnol. (2010) 88:689-698 (2010) B. Muller et al.
describe the preparation of four fusion protein vectors that encode
one of the MtSEO1 to MtSE04 genes of Medicago truncatula and the
Venus yellow fluorescent protein gene. The fusion protein was
successfully expressed in epidermal cells of N. benthamiana; when
the respective MtSEO gene was co-expressed with MtSEO-F1 or
MtSEO-F4, protein complexes were formed that resembled a forisome
body but had a different phenotypes. Using the same experimental
approach, in the case of MtSEO-F2 and MtSEO-F3 protein was
detectable that was localized in the cytoplasm only. In addition,
MtSEO-F1/MtSEO-F1venus and MtSEO-F4/MtSEO-F4venus were coexpressed
in yeast to demonstrate the possibility of producing such
artificial forisome bodies in larger quantities. Furthermore, large
quantities of artificial forisomes can be produced by single
expression of MtSEO-F1 or MtSEO-F4.
[0007] In the past decades, great strides have been made in protein
biochemistry, however the purification of recombinant proteins
often still presents a substantial challenge, for example for
membrane-associated or toxic proteins. In particular with enzymes,
it is often observed that the quantity of the enzyme and/or its
activity is not within a desirable range making the cost of the
assay or the like unreasonably high because of the amount of enzyme
required. The expression of recombinant proteins itself may in turn
be problematic; some of these proteins may not be folded correctly
in the expression organism, or deposited in an inactive form as
inclusion bodies within the cell. A further requirement for
production is the re-usability of enzymes, which is often
accomplished by immobilization on support materials (agarose,
nylon). This immobilization often results in strongly reduced
enzyme activities, leading to disproportionately high costs of the
subsequent assays. Purification of polyclonal antibodies in
particular, which is usually performed by chromatographic methods,
also remains to be improved. The inventors have therefore set
themselves the task to remedy this situation by providing proteins
that, on the one hand, can be produced with reasonable effort and,
on the other hand, have a structure or form that facilitates the
use of these proteins for the afore-mentioned purposes, and/or
improves the results obtained with their use compared to results
obtained with known proteins or other materials previously used for
this purpose.
SUMMARY OF THE INVENTION
[0008] To solve this object, the invention proposes to provide
modified forisomes. They can improve and simplify many areas of
protein chemistry by the biochemically active structures that are
contained in the form of fusion proteins therein. When the fusion
introduces enzymatic functions to the forisomes, the forisomes can
serve as carrier proteins to which the enzymes are immovably
coupled, thus circumventing attachment to an external matrix. The
forisome may also provide a protective function to the foreign
coupled protein in the context of recombinant protein production,
e.g., by simplifying their purification: The foreign protein can be
easily isolated in the form of forisomes and, if needed,
subsequently excised by means of appropriate protease cleavage
sites and corresponding proteolytic enzymes. When antigenic
structures are introduced into the forisome by fusion, these
structures can be employed for purification of antibodies. In
addition, by selectively varying their binding properties or by
changing their conformation, the bodies according to the invention
may be used for micromechanical purposes.
[0009] From the above-cited work in combination with the analysis
of the SEO-F genes and proteins, it is known that a fusion protein
consisting of a SEO-F1 or SEO-F4 protein, a fluorescent tag, and a
corresponding native protein are capable of forming forisome
bodies. However, the inventors of the present invention found that
the assembly of forisomes from, or with, fusion proteins containing
any SEO-F unit fused to any protein is not possible. They were
nevertheless able to produce artificial forisome bodies containing
foreign proteins that were suitable for the purpose of the
invention. These forisome bodies can be expressed in yeast, thus
allowing large production of forisomes. The authors were successful
because it was shown that SEO-F proteins and/or fragments thereof
may be combined with either the C-terminus or the N-terminus of a
variety of proteins and, optionally, of peptides, whereby forisomes
are formed, provided one of the following conditions is met.
[0010] The object of the invention is accordingly achieved by
providing artificial forisome bodies comprising a fusion protein of
at least one SEO-F protein or an at least 50-amino acid portion
thereof, and at least one additional protein or peptide, wherein
[0011] (a) the additional protein or peptide has a mass of at most
30 kDa, preferably of at most 25 kDa, and/or [0012] (b) the
forisome body further comprises an unfused, often native SEO-F
protein or a form of said protein having C-terminal deletions of up
to approximately 50, in particular of up to 45, and preferably of
up to 43 amino acids and/or N-terminal deletions of up to 13 amino
acids, wherein the unfused SEO-F protein has the property of
forming homomeric forisome bodies in the absence of additional
SEO-F proteins, or [0013] (c) the additional protein or peptide is
a portion of a second SEO-F protein, with the proviso that one of
the two SEO-F proteins in its unfused form is capable of forming
homomeric forisome bodies, and the fusion protein is comprised of
an N-terminal SEO-F protein portion and a C-terminal SEO-F protein
portion, wherein the fusion is within a region that is identical or
approximately identical in both SEO-F proteins and is located
within an identical or substantially identical region of the
proteins relative to a region that is relevant for their function,
so that the fusion protein represents a complete SEO-F protein,
wherein however up to approximately 50 amino acids, in particular
up to 45 amino acids, and preferably up to 43 amino acids of the
C-terminus and/or 13 amino acids of the N-terminus may be
deleted.
[0014] Of course, the present invention also encompasses forisome
bodies that fulfill more than one of the conditions (a), (b) and
(c).
BRIEF DESCRIPTION OF THE DRAWINGS
[0015] FIG. 1 shows the schematic illustration of motif M1. Motif
M1 is characteristic for proteins of the SEO family and located
near their C-terminus in the SEO-CTD. Of special interest are the
four highly conserved cysteines of this motif. In the forisome
subunit MtSEO-F1, these cysteines are at the positions 615, 620,
633 and 634 of the amino acid sequence.
[0016] FIG. 2 shows an activity assay for the purified
MtSEO-F1/MtSEO-F2-G6PDH forizymes and MtSEO-F1 control forisomes
based on measuring the formation of NADPH by monitoring the
absorbance at 340 nm in a G6PDH enzyme assay.
[0017] FIG. 3 shows the recombinant protein purification of
MSP.sub.19, using protein bodies consisting of either one or two
forisome subunits.
[0018] FIG. 4 shows utilizing the interaction of the B-domain and
IgG antibodies for immobilizing artificial forisomes. For
visualization, the B-domain is fused to the SEO-F1 subunit of the
forisome body and detected by a fluorescence-coupled IgG
antibody.
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENT
[0019] As already mentioned above, forisome bodies assembled from
the combination of fusion proteins MtSEO-F1venus and MtSEO-F4venus
with corresponding native proteins such as MtSEO-F1/MtSEO-F1venus
and MtSEO-F4/MtSEO-F4venus are known from the prior art. These
shall be excluded from the scope of the patent. They were produced
for the purpose of forisome detection, while the present invention
is in no way aimed at detecting forisomes, but at solving specific
problems that occur in protein chemistry. Therefore, all such
forisome bodies shall fall outside the scope of the patent that
were generated from or with fusion proteins having a SEO-F protein
or SEO-F peptide fused to a GFP protein (see SEQ ID NO:9 in
Sequence Listing) or to a Venus protein (see SEQ ID NO:10 in
Sequence Listing) or a portion thereof, or fused to a (artificial)
variant thereof, provided the fusion protein is fluorescent,
optionally by use of excitation light (such as blue or ultraviolet
light). Those forisome bodies shall also not fall within the scope
of the patent that are constructed to contain fusion proteins fused
to other fluorescent or otherwise visually detectable peptides and
proteins, e.g., chemiluminescent proteins, provided said fusion
proteins are not biochemically active or activatable in the sense
hereinafter defined. In the broadest sense, this may optionally
apply to any forisome body assembled from or comprising fusion
proteins containing protein components of non-SEO-F molecules that
serve no other purpose, or are generally not intended to serve
another purpose than detecting the presence of the desired fusion.
The exceptions named of course extend to all products of this
invention that contain the above-mentioned forisome bodies or with
which said forisome bodies and/or corresponding fusion proteins can
be produced.
[0020] The invention is aimed at the production of forisome fusion
proteins that confer artificial biochemical activity or
activatability or altered mechanical properties to the forisomes.
Therefore, the additional peptide or protein is selected from the
group of biochemically active or activatable proteins or peptides,
and portions of a second SEO-F protein.
[0021] The term "biochemically active or activatable proteins or
peptides" according to the invention includes, among others, any
protein involved in metabolism such as enzymes-due to their
biocatalytic effects-, any protein capable of eliciting an immune
reaction, or proteins that are therapeutically beneficial such as
in particular antibodies and antigens, all peptides or proteins
having binding sites for foreign proteins or peptides, and other
biotechnologically useful proteins and peptides. The term
"biotechnologically useful" according to the invention includes for
example any protein and peptide whose synthesis may be of
significance for medical applications or diagnostic methods.
Several proteins can be immobilized due to their affinity reaction
with substrate-bound biological or biochemically-produced materials
in order to enable their re-usability. Such proteins or peptides
are also included in the term "biotechnologically useful." Not
covered by the term on the other hand are proteins or peptides that
are (exclusively) designed to detect the fusion protein formation
such as optically detectable, in particular fluorescent proteins,
especially when said proteins or peptides do not possess
biocatalytic activity or any other of the above-mentioned
properties.
[0022] The inventors have found that forisome bodies can generally
always be assembled in yeast when the fusion proteins of the
invention are co-expressed with an unfused, for example native
SEO-F protein, provided said SEO-F proteins has the property of
forming homomeric forisome bodies in the absence of other SEO-F
proteins, see condition (b). This is likely due to the fact that
because of the presence of homomer-forming SEO-F molecule, the
number and characteristics of the structures relevant for assembly
is relatively high.
[0023] Surprisingly, however, the inventors have found that the
above-defined fusion proteins assemble to forisome bodies even in
the absence of said unfused SEO-F proteins in yeast when the
proportion of foreign protein does not exceed a certain size. The
inventors have found that this occurs when the non-SEO-F-portion
has a mass of at most 30 kDa. It is more advantageous to limit the
size to approximately 25 kDa (condition (a)). The forisome bodies
thus obtainable are somewhat thinner and more fibrous, but can
still be purified.
[0024] In regards to the definition of artificial forisomes in
provision (c) it must be mentioned that in the context of the
invention it was determined that SEO-F fusion products having all
required properties of a SEO-F protein can be produced
artificially. This requires that at least a portion of the fusion
protein is derived from a SEO-F protein that is capable of forming
homomeric forisomes. It is believed that in these proteins the
structures that are required for assembly and thus contribute to
the formation of forisomes are more pronounced. The aforementioned
possibility that a certain deletion, which can be more extensive in
the C-terminal region than in the N-terminal region, is, according
to inventor's preliminary opinion without being absolutely bound
thereto, due to the fact that the structures relevant for assembly
are not located within these regions.
[0025] The inventor's discovery that according to conditions (c)
artificial SEO-F proteins can be obtained that have the ability of
assembling to homomeric forisomes, i.e., without additional, for
example unfused protein, enables the preparation of forisomes
having assembly properties that can be appropriately controlled,
e.g. increased. In this way the mechanical properties of such
forisomes can be adjusted to the desired applications. For example,
the conditions (Ca.sup.2+ concentration and/or pH and/or electrical
stimuli) required for conformational changes can be varied so that
the forisomes can also be technically used under conditions that
are not able capable of inducing conformational changes in native
forisomes.
[0026] According to the invention, the fusion protein may contain
the additional protein C-terminally i.e. based on the cloning
vector and the DNA reading frame, "upstream", or N-terminally, i.e.
based on the cloning vector and the DNA reading frame
"downstream."
[0027] Particular advantages of using the present invention can be
achieved in the following areas: [0028] a) Enzyme immobilization is
used for industrial enzymes as it offers the advantage of re-using
enzymes and minimizing contaminations in the enzyme product.
However, the carrier material generally reduces the stability and
activity of enzymes compared to their soluble forms. To date,
enzyme immobilization is conducted mainly by adsorption,
entrapment, cross-linking, or covalent binding of the enzyme to
substrate materials. Disadvantages of immobilization methods
include for example insufficient binding of the enzyme following
adsorption and inclusion, the use of toxic chemicals for
cross-linking, and blockage of essential functional amino acids
groups when covalent bonds are introduced. The support materials
used to date are synthetic polymers such as acrylic resins,
hydrogels and silica, smart polymers such as PNIPAM, or biopolymers
such as agarose, cellulose, starch, and chitosan. For example,
glucose-6-phosphate dehydrogenase immobilized to agarose beads with
an activity of 1000-1750 Units/gram agarose is commercially
available. The purification of the enzyme, and the subsequent
coupling of the enzyme to the carrier material thereby represent
two separate steps, wherein the enzyme activity after
immobilization is greatly reduced. [0029] b) Depending on the
properties of the protein, expression of recombinant proteins may
be problematic. For example toxic proteins affect the vitality of
the expression organism and reduce the amount of recombinant
protein produced. Other proteins are not properly folded or
deposited as inclusion bodies in inactive forms within the cell.
Other problems may occur during purification of the recombinant
protein. For example, the isolation of membrane proteins is
complicated by their interaction with membrane components, or
proteins may be degraded during the purification process.
Furthermore, the process of protein purification is usually very
expensive and often requires the use of large amounts of
environmentally harmful chemicals. In practice, even in industrial
manufacturing process, the purification consists of multiple steps.
The steps involved include precipitation, filtration, or
chromatographic methods. The most important criteria of these
methods are the purification efficiency, cost efficiency, and
biological sustainability. For example, precipitation is very
cost-effective, but delivers a low degree of purity and requires
use of large amounts of chemicals, while filtration or
chromatographic methods are often very expensive. For this reason,
the development of new purification methods that increase the
purity of the product, reduce costs, and minimize the use of
chemicals are of great interest to the industry. [0030] c)
Polyclonal antibodies are generated by injecting animals with
respective antigens (proteins or peptides). Several weeks later,
the polyclonal serum may be harvested from the blood of the animal.
For the generation of monoclonal antibodies, plasma cells from
spleen or lymph nodes of immunized animals are isolated, fused with
tumor cells, and grown in sterile culture. After several rounds of
selection, hybridoma cultures can be obtained that originate from a
single cell and secrete the desired monoclonal antibody. In
particular with polyclonal antibodies, more rarely with monoclonal
antibodies, the serum contains not only the desired antibodies but
also undesired antibodies (e.g., keratin antibodies) and/or
substances that interfere with detection (e.g., proteins that are
similar to the antigen used, or proteins that aggregate and
interfere with detection methods.) These substances must be removed
from the desired antibody. To date, this has been accomplished by
chromatographic methods wherein the antigen is bound to a column
matrix. The matrix is subsequently incubated with the "impure"
antibody solution, allowing the specific antibodies to bind to the
antigen, and thus to the matrix. After the matrix is washed, the
antibodies are eluted from the column (e.g., by a solution with an
acidic pH.) A simplification of this laborious method and increased
efficiency is extremely desirable. [0031] d) The advantages of the
invention, however, are not limited only to the manufacture and the
properties of foreign proteins; they can be advantageously used in
the field of forisomes itself: As mentioned above, forisomes are
plant mechanoproteins that can be employed e.g., as control modules
in microfluidic systems due to their calcium or pH-inducible
conformational changes. These properties allowed A. Q. Shen et al.
in Smart Struct. Syst. 2, 225-235 (2006) and K. Uhlig et al. in J.
Microelektromech. Sys. 17, 1322-1328 (2008) to demonstrate that the
flux of fluorescent particles in microchannels could be controlled
using forisomes integrated therein. However, targeted, permanent
attachment of forisomes can only be achieved to date manually with
the help of micromanipulation techniques that require a very large
amount of time and effort. Thus, Shen et al. and Uhlig et al. (loc.
cit.) took advantage of forisome's natural adhesion to glass.
Forisomes thereby adhere to surfaces when pressed against them.
However, the adhesion does not enable permanent attachment of the
forisomes in a fluid stream. In addition, the strength of the
forisome reaction is reduced upon their adhesion to surfaces (G. A.
Noll et al., Bioeng. Bugs 2, 111-114 (2011)).
[0032] The provision of forisomes with conformational properties
that can be altered by known stimuli (e.g., upon conversion from a
condensed to dispersed state and vice versa at a different pH or
with a different Ca.sup.2+ concentration) is also desirable.
[0033] The inventors of the present invention succeeded in
providing a material that has advantages in all four of the
mentioned areas. It was thereby found that expression of fusion
proteins is often possible when forisome proteins that can form
homomers independently of the presence of other forisome subunits
are co-expressed in the same cell. In contrast, the expression of
the fusion protein alone yields usable product only when small
foreign proteins are used, while in other cases forisome bodies are
not formed and instead the protein is present in soluble form or
deposited in the cell as "inclusion body."
[0034] When a fusion protein is co-expressed with a homomeric
forisome body forming SEO-F subunit and/or a when a fusion protein
of a relatively small foreign protein component is expressed,
stable forisome bodies can be expressed in plants and in yeast
having substantially the form of native forisomes, despite the
presence of a foreign protein or peptide. Thus, the invention
offers the possibility of producing individually modulatable
functionalized artificial forisomes. This was surprising in itself,
but also in particular the finding that the assembly of the
forisome bodies did not impede the functional activity of the
foreign protein. Using the example of enzymes fused to SEO-F units
it was shown that the forisome bodies reduced the activity of the
foreign proteins to a lesser extent than commercially applied
immobilization matrices; it may be assumed that this applies to all
fusion proteins, despite not having being demonstrated for a number
of other proteins due to lack of quantitative comparisons.
[0035] The use of MtSEO-F1 and MtSEO-F4 is particularly preferred;
however, SEO-F subunits from other sources may be used equally
well.
[0036] It has been found that it is not necessary for the entire
amino acid chain of a respective native SEO-F subunit to be present
in the fusion protein. Instead, even a relatively small amount
thereof suffices, for example, a region of approximately 60 to 250
amino acids in length, as the inventors were able to determine via
fusion with fluorescent proteins. This also corresponds to the
finding that the presence of homomer-forming proteins such as
SEO-F1 and/or SEO-F4 determines whether forisome are formed when
the foreign protein exceeds a certain size.
[0037] The SEO-F component of the fusion protein can be derived
from any SEO-F subunit; preferably, it is derived from the subunits
SEO-F1, SEO-F2 and SEO-F4, especially from MtSEO-F1, MtSEO-F2 and
MtSEO-F4.
[0038] The coexpressed, unfused SEO F protein, if present, should
be substantially or at least in large part complete in order to
ensure forisome formation. The inventors have found, however, that
it is not required for the entire chain of respective subunits to
be present. An N-terminal deletion of at least up to 13 amino acids
and/or C-terminal deletions of at least up to 43 amino acids,
optionally of up to 45 and possibly up to 50 amino acids are
acceptable without the forisome bodies of the present invention
being adversely affected.
[0039] The forisome bodies of the present invention may be
comprised of any number of subunits; generally, a species of a
non-fused SEO-F subunit in combination with a species of a fusion
protein is sufficient, or a species of the fusion protein alone,
provided the foreign protein component does not exceed the
mentioned size. The forisome bodies generally consist of from
approximately 10.sup.6-10.sup.7 individual protein chains, wherein
optionally the ratio of the number of unfused SEO-F subunits to the
number of fusion proteins is approximately between 4:1-1:1,
depending on the type and size of the foreign protein.
[0040] Individual forisome bodies of the invention are generally
comprised of only one type of fusion protein; however, they may
also contain several different fusion proteins. A specific,
particularly advantageous example thereof is illustrated below in
point 1).
[0041] The origin of the native source of the respective forisome
subunits is not significant for the invention. It was possible to
produce forisome bodies according to the invention with SEO-F
genes, for example, from the organisms Dipteryx panamensis, Pisum
sativum, Vicia faba, Canavalia gladiata and Lotus japonicus. This
suggests that it is possible to employ corresponding genes of any
plants of the Fabacea family in the invention. In addition,
genetically modified or synthetic SEO-F genes and/or forisomes
subunits may be employed provided all of the conserved regions of
genes of this plant family are preserved and/or present.
[0042] It has been suspected for some time that a sequence of four
cysteines in the amino acid sequence of the various forisomes
subunits greatly affects their structure and stability. These
cysteines are located in the C-terminal portion of the amino acid
sequence (following position 600) of all three forisomes subunits
SEO-F1, F2, and SEO-SEO-F4, in each case within a highly conserved
motif CPNPXCGRVMEVXSXXYKCC (where X denotes a variable amino acid).
This motif is highly conserved in all SEO genes (i.e., also in
those of other plant families). The corresponding sequence motif is
shown in FIG. 1. However, the inventors have shown that the
presence of this region is not essential for forisomes formation:
As mentioned above, it is possible to use a SEO-F-protein in form
of a coexpressed unfused SEO-F protein or a fusion protein
comprising two SEO-F components, having a C-terminal deletion of up
to 43, possibly even up to 45 or even 50 amino acids without the
inventive feature of protein chain aggregation being lost. However,
when the complete sequence of a SEO-F1 or SEO-F4 is used, or at
least a sequence in which at least a part or all of the said
conserved motif is present, the above cysteines obviously have a
significant role: It has been shown that when the mentioned
cysteines are partially or completely replaced, for example by
"site-directed mutagenesis," by amino acids which do not allow
disulfide bond formation, e.g., glycine or alanine, the
conformational states of the forisome bodies changes as follows: If
the last two of said cysteines (cysteines C21 and C22 in the
sequence motif) are mutated, the protein fibrils no longer assemble
in all cases to forisome bodies, but may form a random fiber
network. Without being bound by theory, it can therefore be assumed
that the disulfide bonds between said cysteines of two SEO-F
subunits are responsible for the ordered assembly of the protein
fibrils. If, in contrast, at least one of the first two said
cysteines (cysteines C3 and C8 in the sequence motif) is mutated, a
typical forisome body is assembled upon its expression which,
however, completely dissolves when calcium ions and NaHSO.sub.3 are
added. Calcium thereby triggers the protein fibrils to repel, while
the addition of NaHSO.sub.3 disrupts remaining disulfide bonds. It
can therefore be assumed that the C3 and C8 cysteines are involved
in the association of individual subunits to form fibers, which
allows the protein to adopt its soluble form upon mutagenesis.
[0043] The fibrous bodies may have advantageous properties and are
encompassed by the invention. The term "artificial forisome," as
used in the present invention, is therefore intended to also
encompass the fiber network in at least one embodiment of the
invention.
[0044] The production of soluble forisomes-bodies as described
above is particularly advantageous, as it may facilitate the
purification of proteins, as shown in the examples below.
[0045] As mentioned above, the preparation of forisome bodies is
preferably performed in cells of plants or yeast, with the use of
yeast cells being particularly beneficial because they enable the
production of large amounts of artificial forisome bodies. The
invention is therefore also directed to the corresponding
transformed cells. Finally, the invention also comprises novel
vector constructs by means of which forisome bodies according to
the invention can be produced.
[0046] The invention shall be detailed with reference to several
examples that demonstrate the breadth of application of the
invention on the one hand and on the other specify the individual
measures that enable the expert to carry out the invention. It
should therefore be clear that the above examples are not meant to
be limiting.
[0047] 1) Forisome Bodies with Enzyme-Linked Fusion Proteins
[0048] The linking of enzymes to SEO-F proteins allows the
artificial forisomes to be functionalized in such a manner that
they can serve as substrates for enzymes. Enzymes may thus be
immobilized. Enzyme-linked forisomes are constructed as follows:
They consist of a first, optionally shortened, SEO-F subunit that
is fused to an enzyme, and optionally a second SEO-F unit selected
from SEO-F1 and SEO-F4, which may be deleted as described above if
necessary or if desired. The enzyme may be fused to the C- or
N-terminus of the fusion protein. Fusions proteins can be generated
by coexpression in organisms suitable for expression such as yeast
(e.g., Saccharomyces cerevisiae), bacteria (e.g., Escherichia coli)
or plants (e.g., tobacco). The (co-) expression in yeast is
particularly preferred. The resulting enzyme-linked forisomes are
characterized by high stability. They are isolated from the
expression organism (e.g., by disruption of yeast cells) and are
separated from cell components, e.g., by centrifugation/density
gradient centrifugation. Appropriate enzyme activity assays are
used to verify the activity of the coupled enzyme. Using
glucose-6-phosphate dehydrogenase as an enzyme fused to the
N-terminus of a forisome subunit, a significantly higher enzymatic
activity was measured in comparison to the commercially available
immobilized enzyme (2700 Units/gram forisome compared to 1000-1750
U/g agarose, see SEQ ID NO:4 in Sequence Listing). The enzyme was
isolated directly in an immobilized form from the production
organism, thereby omitting the step of substrate coupling in the
enzyme production. This not only facilitates the procedure, but
obviously and surprising causes an extreme increase in activity.
Fusion proteins containing hexokinase and phosphoglucoisomerase
that were prepared in a similar manner yielded similar results.
[0049] When not only one, but two or even more fusion proteins are
coexpressed, wherein the fusion partners are selected so that the
reaction product of the first enzyme is a substrate for the second
enzyme and its reaction product is optionally a substrate for a
third protein, etc., reaction complexes can be generated that allow
certain reaction pathways to take place.
[0050] In the fusion protein, the enzyme can also be bound to the
C-terminus of the SEO-F protein.
[0051] 2) Purification of Recombinant Proteins
[0052] As mentioned above, the artificial forisome bodies of the
invention can also be used as purification systems for recombinant
proteins. Said proteins are thereby fused to a SEO-F subunit and
the fusion protein is optionally co-expressed with a second SEO-F
subunit that is able to form homomers in the absence of other
subunits, as described above, for example, in yeast or plant cells.
The recombinant protein may be present at the C-terminus or
N-terminus of the fusion protein, and optionally contain a protease
restriction site that enables the foreign protein to be cleaved
from the forisome body following purification. The isolation and
purification of the obtained artificial forisomes is performed by
cell disruption and e.g., centrifugation/density gradient
centrifugation. Alternatively, the protein polymer can be converted
from the solid state polymer to a soluble state, in particular
following mutation of one or more of the above-described C-terminal
conserved cysteines by means of high Ca.sup.2+ concentration (<2
mM), or by a combination of high Ca.sup.2+ concentration (<2 mM)
and reducing conditions (>18.5 .mu.M NaHSO.sub.3). Thus,
forisome technology presents an entirely new purification system
that completely omits traditional methods such as precipitation,
filtration, and chromatography, and instead is based on
centrifugation and the conformational state of the protein. Based
on this technology, purification of a variety of proteins can be
simplified and the cost reduced. In addition, the purification
system offers the advantage that toxic effects or interactions of
the proteins to be purified with the membrane can be minimized or
prevented by fusion to forisomes. Using this approach, the malaria
antigen MSP1.sub.19 for example was successfully purified by the
present invention; this is extremely difficult by other means due
to the strong interaction of MSP1.sub.19 with the membrane. The
purification is illustrated by immunological detection of the
antigen, which is shown in FIG. 3.
[0053] 3) Purification of Antibodies
[0054] The invention enables purification of polyclonal or
monoclonal antibodies to be performed using artificial forisomes,
thereby avoiding previous chromatographic separation steps. For
this purpose, the antigen is cloned upstream or downstream to a
forisome gene (MtSEO-F1 or MtSEO-F2 or MtSEO-F4 and/or a portion
thereof, as defined above) by the methods described previously. The
antigen-MtSEO-F-fusion product is subsequently expressed in yeast,
optionally together with MtSEO-F1 and MtSEO-F4 having C-terminal
and/or N-terminal deletions of up to 13 amino acids. This procedure
yields artificial forisomes that contain the antigen in the yeast
cells.
[0055] The yeast cells are grown, pelleted by centrifugation, and
the cells disrupted. The artificial forisomes carrying the antigen
are now free in solution and can be used to purify the polyclonal
or monoclonal antibodies as follows.
[0056] The antigen-containing artificial forisomes are incubated
with antibody serum, whereby the specific antibodies bind to the
artificial forisomes. The forisome are pelleted by centrifugation,
washed, and the antibodies subsequently eluted via a pH change. The
antibody solution is then neutralized and can now be used for
various applications (Western blot, immunoprecipitation, ELISA,
antibody therapy, etc.).
[0057] 4) Modification of Forisomes Properties
[0058] With the help of the invention, forisomes can be modified
artificially to acquire new, technologically useful properties. For
example, the binding of forisomes to surfaces can be improved by
including SEO-F subunits fused to protein or (protein or peptide)
tags in said forisomes. This approach enables their positioning and
immobilization in microchannels. Examples include the fusion with
the B-domain of the Staphylococcus aureus protein A, with
glutathione S-transferase or with biotin, which allows selective
surface functionalization of the artificial forisome produced in
the organism and subsequent isolation in a manner that enables
their covalent binding to surfaces coated with IgG, glutathione, or
streptavidin. As before, stable forisome can be obtained when a
SEO-F subunit capable of forming homomers in the absence of other
subunits is coexpressed with the fusion protein, or the foreign
protein component in the expression product is not too large. This
circumvents problems associated with accurate positioning of
forisomes employed as mechanoproteins to surfaces or to micro
channels. If a fusion is performed with a further SEO-F protein
instead of with a foreign protein, a mechanoprotein body is
obtained having conformational change properties that can be
modified by the Ca.sup.2+ concentration and pH.
[0059] The following examples of specific embodiments are intended
to deepen the understanding of the invention.
Example 1--Enzyme Immobilization Using Artificial Forisomes (Enzyme
Coupling)
[0060] I. The forisome genes MtSEO-F1 and MtSEO-F2 and MtSEO-F4
with and without translational stop codon were amplified from M.
truncatula cDNA using the following oligonucleotides (the
restriction sites are underlined):
TABLE-US-00001 MtSEO-F1 fw Ncol: 5'-AGA ACC ATG GGA TCA TTG TCC AAT
GGA ACT AAA C-3' MtSEO-F1 rev Xhol with stop: 5'-AGA CTC GAG TCA
TAT CTT GCC ATT CTG TGG AGC-3' MtSEO-F1 rev Xhol without stop:
5'-AGA CTC GAG CAT ATC TTG CCA TTC TGT GGA GC-3' MtSEO-F2 fw Ncol:
5'-AGA ACC ATG GGA TCC ACT GCA TTG TCC TAT AAT G-3' MtSEO-F2 rev
Xhol with stop: 5'-AGA CTC GAG TCA AAT GCA ACT ATC TGG-3' MtSEO-F2
rev Xhol without stop: 5'-AGA CTC GAG ATG CAG CAA CTA TCT GGA-3'
MtSEO-F4 fw Ncol: 5'-AGA ACC ATG GGA TCC CTT TCC AAC TTA GGA AG-3'
MtSEO-F4 rev Xhol with stop: 5'-AGA CTC GAG TCA AAC ACC AAG ATT GTT
TGG-3' MtSEO-F4 rev Xhol without stop: 5'- AGA CTC GAG ACA CCA AGA
TTG TTT GGT TC-3'
[0061] The amplicons were digested with the restriction enzymes
NcoI/XhoI and cloned into the corresponding restriction sites of
the pENTR4.TM. vector (Invitrogen, Germany). In this way,
pENTR4-MtSEO-F vectors with and without stop codons were
generated.
[0062] II. The genes of the enzymes hexokinase 2 (HXK2),
phosphoglucoisomerase (PGI) and glucose-6-phosphate dehydrogenase
(G6PDH) from Saccharomyces cerevisiae were amplified as cDNA using
the following oligonucleotides (the restriction sites are
underlined).
TABLE-US-00002 G6PDH fw Xhol: 5'-AGA CTC GAG AAT GAG TGA AGG CCC
CGT C-3' G6PDH rev Xhol: 5'-AGA CTC GAG CTA ATT ATC CTT CGT ATC
TTC-3' HXK2 fw Xhol: 5'-AGA CTC GAG AAT GGT TCA TTT AGG TCC AAA-3'
HXK2 rev Xhol: 5'-AG ACT CGA GTT AAG CAC CGA TGA TAC CA-3' PGI Xhol
fw: 5'-AGA CTC GAG AAT GTC CAA TAA CTC ATT CAC-3' PGI Xhol rev:
5'-AGA CTC GAG ATC ACA TCC ATT CCT TGA ATT G-3' Invertase Xhol fw:
5'-AGA CTC GAG AGC ATC AAT GAC AAA CGA AAC-3' Invertase Xhol rev:
5'-AGA CTC GAG CTA TTT TAC TTC CCT TAC TTG G-3'
[0063] The amplicons were digested with XhoI and cloned into the
corresponding restriction site of the pENTR4-MtSEO-F vectors
without stop (see a) I). In this way, the following vectors were
obtained: pENTR4-MtSEO-F1-G6PDH, pENTR4-MtSEO-F2-G6PDH,
pENTR4-MtSEO-F4-G6PDH, pENTR4-MtSEO-F1-HXK2, pENTR4-MtSEO-F2-HXK2,
pENTR4-MtSEO-F4-HXK2, pENTR4-MtSEO-F1-PGI, pENTR4-MtSEO-F2-PGI and
pENTR4-MtSEO-F4-PGI.
[0064] III. The vectors pENTR4-MtSEO-F1 with stop and
pENTR4-MtSEO-F4 with stop were recombined with the yeast vectors
425GPD-ccdB (Addgene, USA). The resulting expression constructs
425GPD-MtSEO-F1 and 425GPD-MtSEO-F4 were transformed into the yeast
strain InvSc1 (Invitrogen, Germany). For selection, the correction
of the yeast strain leucine auxotrophy was used. The resulting
yeast cells produce artificial forisomes of MtSEO-F1 or MtSEO-F4
that were used as the basis for enzyme coupling.
[0065] IV. The above-mentioned pENTR4 vectors with MtSEO-F-enzyme
fusions (see 1.II.) were recombined with the yeast vector
424GPD-ccdB (Addgene, USA). The resulting vectors
(424GPD-MtSEO-F1-G6PDH, 424GPD-MtSEO-F2-G6PDH,
424GPD-MtSEO-F4-G6PDH, 424GPD-MtSEO-F1-HXK2, 424GPD-MtSEO-F2-HXK2,
424GPD-MtSEO-F4-HXK2, 424GPD-MtSEO-F1-PGI, 424GPD-MtSEO-F2-PGI,
424GPD-MtSEO-F4-PGI) were each transformed into yeast that already
contained a plasmid (425GPD-MtSEO-F1 or 425GPD-MtSEO-F4) to
generate artificial forisomes of MtSEO-F1 or MtSEO-F4 (see a) III.)
The resulting double mutants (e.g.,
425GPD-MtSEO-F1/424GPD-MtSEO-F2-G6PDH) are therefore corrected for
their leucine as well as tryptophan auxotrophy.
[0066] V. Expression yeasts producing enzyme-coupled forisomes (see
a) I.-IV.) were grown in a volume of 50 ml until the OD.sub.600 nm
was between 5-7 and harvested by centrifugation (1000.times.g, 10
min). The yeast pellet was washed with 50 ml of V-medium (10 mM
Tris, 10 mM EDTA, 100 mM KCl, pH 7.4), centrifuged again
(1000.times.g, 10 min) and frozen at -20.degree. C. The frozen cell
pellet was resuspended in 1 ml V-medium, and approximately 500 mg
glass beads (425-600 .mu.m) were added. The cells were disrupted in
1.5 ml tubes at 30 Hz in the Mixer Mill MM400 (Retsch, Germany).
The artificial forisome with the insoluble cell components were
subsequently pelleted by centrifugation and resuspended in 0.5 ml
V-medium. The solution was loaded on a sucrose or Nycodenz density
gradient in which the sucrose or Nycodenz concentration increased
from 40% to 70%. The gradient was centrifuged in a Beckman
ultracentrifuge at 163,000.times.g at 4.degree. C. for 3 h.
[0067] The forisome-containing phase was subsequently removed from
the gradient with a pipette, diluted 1:2 with V-medium and divided
into 2 equal aliquots. The aliquots were centrifuged for 10 minutes
at 100.times.g and the supernatant removed. The forisomes of the
first aliquot were then taken up in 50 .mu.l V-medium and used to
determine the molecular mass and concentration of the
enzyme-coupled artificial forisomes by SDS-polyacrylamide gel
electrophoresis (SDS-PAGE). The second aliquot was taken up in 50
.mu.l enzyme buffer (for G6PDH-coupled forisomes: 250 mM
glycylglycine buffer, pH 7.4; HXK2-coupled forisomes: 0.05 M
Tris-HCl buffer with 13.3 mM MgCl.sub.2, pH 8; PGI-coupled
forisomes: 250 mM glycylglycine buffer, pH 7.4). This aliquot was
used to determine the activity of the forisomen-coupled enzymes
using specific enzyme assays.
[0068] VI. The molecular mass and concentration of enzyme-coupled,
artificial forisomes (see a) IV) were determined by SDS-PAGE
analysis. The different forisome proteins comprising the
enzyme-linked, artificial forisomes (e.g., MtSEO-F1 and MtSEO-F2
enzyme fusion protein) are thereby separated. The presence of the
individual proteins was determined by comparing the mass predicted
by bioinformatics (e.g., MtSEO-F2-G6PDH=124.7 kilodaltons) with the
actual mass of the protein in the gel (MtSEO-F2-G6PDH=approx. 130
kDa). The protein concentration was determined using a standard
series of defined protein amounts that was loaded simultaneously
and/or by using the protein marker Precision Plus Protein Standards
unstained (Bio-Rad). We were able to obtain a total amount of
protein (single MtSEO-F protein+MtSEO-F-enzyme fusion) between
56-124 .mu.g of artificial, enzyme-linked forisomes, depending on
the selected forisome protein and enzyme fusion, from a 50 ml yeast
expression culture. The proportion of MtSEO-F-enzyme fusion
relative to the total protein content is between 10%-50% depending
on the fusion partner. We obtained the largest quantities, both of
total protein (124 .mu.g/50 ml culture) and enzyme fusion protein
(37 .mu.g/50 ml culture) when PGI-coupled enzyme forisomes were
generated (MtSEO-F1/MtSEO-F2-PGI).
[0069] The activity of the forisome-immobilized enzymes was
determined by specific spectrophotometric enzyme assays. For
glucose-6-phosphate dehydrogenase, the protocol recommended by
Sigma-Aldrich (Germany) was used. The assay is based on the
G6PDH-catalyzed conversion of glucose-6-phosphate into
6-phosphogluconolactone. In this reaction, nicotinamide adenine
dinucleotide phosphate (NADP.sup.+) is reduced to NADPH:
##STR00001##
[0070] The absorbance of NADPH in the wavelength range of 340 nm
can be measured photometrically and used to calculate enzyme
activity. For this assay, the purified enzyme forisomes from the
second aliquot (see a) V.) were used. Using the determined
concentration of the enzyme-linked forisomes (see a)VI.) the
measured enzyme activities per gram of artificial forisome was
calculated. Depending on the construct (see a) III.) activities
between 2000-2700 Units per gram of artificial forisome were
obtained for forisome-immobilized glucose-6-phosphate
dehydrogenase. In comparison, glucose-6-phosphate dehydrogenase
immobilized to agarose beads that is commercially available from
Sigma-Aldrich (Germany) has only between 1000 to 1750 Units per
gram of agarose. Thus, the forisome-immobilized glucose-6-phosphate
dehydrogenase of the present invention exhibits a markedly higher
specific enzyme activity (enzyme activity based on the amount of
carrier material). FIG. 2 shows an enzyme activity assay of
glucose-6-phosphate dehydrogenase that is coupled to the forisome
bodies SEO-F1 and SEO-F2 of the invention.
[0071] The activity of forisome-immobilized hexokinase 2 and
phosphoglucoisomerase was determined using a similar assay
principle. In this case, only two successive enzyme reactions were
used to measure the enzyme activity based on the increase of NADPH
absorbance at 340 nm. For hexokinase 2, the protocol recommended by
Worthington (Lakewood, N.J., USA) was used, which is based on the
following reaction:
##STR00002##
[0072] Glucose-6-phosphate dehydrogenase required for the second
reaction was added to the assay in the form of commercially
available soluble enzyme with a defined activity. Depending on the
construct (see a) III.) activities between 6000-8000 Units per gram
of artificial forisome were obtained for forisome-immobilized
hexokinase 2. In contrast, agarose-immobilized hexokinase available
from Sigma-Aldrich has an activity of only 50-75 U.
[0073] For phosphoglucoisomerase, the protocol recommended by
Sigma-Aldrich (Germany) was used which is based on the following
reaction:
##STR00003##
[0074] Depending on the construct (see a) III.), activities between
6000-8000 Units per gram of artificial forisome were obtained for
forisome-immobilized phosphoglucoisomerase. In contrast,
agarose-immobilized phosphoglucoisomerase available from
Sigma-Aldrich has an activity of only 300-600 U.
Example 2--Purification of Proteins
[0075] 2.1 Purification of Recombinant Proteins Using Unmutated
Forisome Genes or in Absence of Unmutated Forisome Genes
[0076] I. The coding sequence of a fragment of the malaria surface
antigen MSP (MSP1.sub.19) was amplified from a sequence within a
vector using the following oligonucleotides (restriction sites are
underlined).
TABLE-US-00003 MSP1.sub.19 Ncol fw:
5'-AGACCATGGACCTGCGTATTTCTCAG-3' MSP1.sub.19 Ncol FaXa rev:
5'-AGACCATGGTACGACCTTCGATCC TGCATATAGAAATGCC-3' MSP1.sub.19 Xhol
FaXa fw: 5'-AGACTCGAGAATCGAAGGTCGTGAC CTGCGTATTTCTCAG-3'
MSP1.sub.19 Xbal rev: 5'-AGATCTAGATCACCTGCATATAGAAAT G-3'
[0077] The primers MSP1.sub.19 NcoI FaXa rev and MSP1.sub.19 XhoI
FaXa fw contain the coding sequence of the recognition site for the
protease Factor Xa (shown in italics) in addition to the
gene-specific sequences. The first amplicon was treated with the
restriction enzyme NcoI and cloned into the NcoI site of the
vectors pENTR4-MtSEO-F1 with stop codon, pENTR4-MtSEO-F2 with stop
codon and pENTR4-MtSEO-F4 with stop codon (see a)I.) to generate
the vectors pENTR4-MSP1.sub.19-MtSEO-F1,
pENTR4-MSP1.sub.19-MtSEO-F2 and pENTR4-MSP1.sub.19-MtSEO-F4. The
second amplicon was treated with the restriction enzymes XhoI and
XbaI, and cloned into the XhoI/XbaI-restriction sites of the
vectors pENTR4-MtSEO-F1 without stop codon, pENTR4-MtSEO-F2 without
stop codon and pENTR4-MtSEO-F4 without stop codon (see a)I.) to
generate the vectors pENTR4-MtSEO-F1-MSP1.sub.19,
pENTR4-MtSEO-F2-MSP1.sub.19 and pENTR4-MtSEO-F4-MSP1.sub.19. For
preparation of the expression vectors 424GPD-MSP1.sub.19-MtSEO-F1,
424GPD-MSP1.sub.19-MtSEO-F2, 424GPD-MSP1.sub.19-MtSEO-F4,
424GPD-MtSEO-F1-MSP1.sub.19, 424GPD-MtSEO-F2-MSP1.sub.19 and
424GPD-MtSEO-F4-MSP1.sub.19 the generated vectors were recombined
with the yeast vector 424GPD-ccdB (Addgene, USA).
[0078] II. The vectors 424GPD-MSP1.sub.19-MtSEO-F4 and
424GPD-MtSEO-F4-MSP.sub.19 were transformed into the yeast strain
InvSc1 (Invitrogen, Germany) using the correction of tryptophan
auxotrophy of the yeast strain for selection. The fusion proteins
comprised of MSP1.sub.19 and MtSEO-F4 form forisomes without
additional expression of an additional MtSEO-F protein.
[0079] The vectors 424GPD-MSP1.sub.19-MtSEO-F1,
424GPD-MSP1.sub.19-MtSEO-F2, 424GPD-MtSEO-F1-MSP1.sub.19 and
424GPD-MtSEO-F2-MSP1.sub.19 were transformed into yeast that
already contained a plasmid (425GPD-MtSEO-F1) to generate
artificial forisomes of MtSEO-F1 (see a) III.). The resulting yeast
(e.g., 425GPD-MtSEO-F1/424GPD-MSP1.sub.19-MtSEO-F1) are corrected
for their leucine and tryptophane auxotrophy and provide artificial
forisomes fused to the MSP1.sub.19 protein.
[0080] III. The artificial forisomes fused to MSP1.sub.19 were
purified as described in 1.V and detected and quantified by
SDS-PAGE and Western blotting. All constructs were suitable for
purification. However, the inventors obtained the highest
purification yield of 0.42 mg MSP1.sub.19 protein per liter of cell
culture with the 424GPD-MPS1.sub.19-Mt.SEO-F4 construct. Future
optimization by modifying culture and purification conditions will
lead to higher yields of protein available for purification.
Furthermore, the MSP1.sub.19 protein can be cleaved from the
artificial protein by incubation with Factor Xa protease. In
addition, the inventors have observed that certain reducing and
calcium-containing buffer conditions (4 mM CaCl.sub.2), 200 .mu.M
NaHSO.sub.3, 10 mM TRIS, 100 mM KCl, pH 7.2) can lead to
disassembly of artificial forisomes (especially when the cysteines
in position 615 and 620 of the MtSEO-F1 protein are mutated). This
conversion from the insoluble form to the soluble form may also be
used for protein isolation and purification. FIG. 3 shows the
purification of MSP1.sub.19 using forisome bodies of SEO-F1 or
SEO-F4. The immunological detection of MPS1.sub.19 is shown.
[0081] 2.1b Purification of Recombinant Proteins Using Forisome
Genes Containing Mutated Cysteines
[0082] The cysteines located at positions 3 and 8 in the sequence
motif (FIG. 1) of the MtSEO-F1gene were mutated to serines using
the QuikChange II Site-Directed Mutagenesis Kit from Agilent
Technologies (CA, USA) according to manufacturer's instructions.
The vector pENTR4-MtSEO-F1 with and without stop codons (Example 1)
served as a substrate. The cysteines at position 3 and position 8
correspond to amino acids 615 and 620 of the MtSEO-F1 protein. The
resulting mutated MtSEO-F1 gene is therefore hereinafter named
MtSEO-F1 (C615S/C620S).
[0083] The coding sequence of a fragment of the malaria surface
antigen MSP (MSP1.sub.19) was cloned into the vector pENTR4.TM.
(Invitrogen, Germany) upstream and downstream of MtSEO-F1
(C615S/C620S) as described in Example 2.1a.
[0084] By recombination of the vector pENTR4-MtSEO-F1 (C615S/C620S)
with the yeast vectors 425GPD-ccdB (Addgene, USA) and recombination
of the vectors pENTR4-MSP1.sub.19-MtSEO-F1 (C615S/C620S) and
pENTR4-MtSEO-F1 (C615S/C620S)-MSP1.sub.19 with the yeast vectors
424GPD-ccdB (Addgene, USA), the expression vectors 425GPD-MtSEO-F1
(C615S/C620S), 424GPD-MSP1.sub.19-MtSEO-F1 (C615S/C620S),
424GPD-MtSEO-F1 (C615S/C620S)-MSP1.sub.19 [were generated].
[0085] The following combinations of yeast vectors were transformed
into the yeast strain InvSc1 (Invitrogen, Germany)
425GPD-MtSEO-F1(C615S/C620S)+424GPD-MSP1.sub.19-MtSEO-F1(C615S/C620S)
and
425GPD-MtSEO-F1(C615S/C620S)+424GPD-MtSEO-F1(C615S/C620S)-MSP1.sub.19
[0086] The correction of the leucine and tryptophan auxotrophy of
the yeast strain was used for selection. The resulting yeasts
produce artificial forisomes comprised of MtSEO-F1 (C615S/C620S)
that contain MSP1.sub.19 protein.
[0087] Almost 100% of the resulting artificial forisomes can be
converted into the soluble form with reducing buffer containing
calcium ions (4 mM CaCl.sub.2), 200 .mu.M NaHSO.sub.3, 10 mM TRIS,
100 mM KCl, pH 7.2), while only a small proportion of the
non-mutated version converts to the soluble form.
[0088] The purification process can thereby be abbreviated. After
cultivation, the yeast cells containing artificial forisomes with
MSP1.sub.19 protein can be disrupted, the artificial forisome and
yeast components separated from soluble components by
centrifugation, and the protein-forisome-fusions products then
brought into solution.
[0089] 2.2 Purification of Antibodies Using Artificial
Forisomes
[0090] I. The coding sequence of the Small Rubber Particle Protein
3 (SRPP3) was amplified from sequences within a vector with the
following oligonucleotides (restriction sites are underlined).
TABLE-US-00004 SRPP3 Xhol fw: 5'-AGA CTCGAG A ATGACCGACGCTGCTT C-3'
SRPP 3 Xhol rev: 5'-AGA CTCGAG TCATGTTTCCTCCACAAT C-3'
[0091] The amplicon was treated with the restriction enzyme XhoI
and cloned into the XhoI site of the vector pENTR4-MtSEO-F1 without
stop codon (see a)I.) to generate the vector pENTR4-MtSEO-F1-SRPP3.
To generate the expression vector 424GPD-MtSEO-F1-SRPP3 the
resulting vector was recombined with the yeast vector 424GPD-ccdB
(Addgene, USA).
[0092] II. The vector 424GPD-MtSEO-F1-SRPP3 was transformed into
yeast cells that already contained a plasmid (425GPD-MtSEO-F1) to
produce artificial forisomes of MtSEO-F1 (see 1.III.). The
resulting yeasts (e.g., 425GPD-MtSEO-F1/424GPD-MtSEO-F1-SRPP3) are
corrected for their leucine and tryptophan auxotrophy and present
artificial forisomes fused to the SRPP3 protein. The yeasts were
grown in a volume of 50 ml to OD.sub.600, centrifuged and
resuspended in 1 ml V-medium (10 mM Tris, 10 mM EDTA, 100 mM KCl,
pH 7.4), and disrupted by means of a ball mill. The artificial
forisomes carrying the antigen were then free in solution and could
be used in the following for purification of polyclonal or
monoclonal antibodies.
[0093] III. The artificial forisomes containing antigen were
incubated for 30 minutes with 500 .mu.l of a polyclonal anti-SRPP3
serum that was produced in rabbit. The specific antibodies thereby
bound to the artificial forisomes. The forisomes were pelleted by
centrifugation (4000.times.g, 4 min), and washed three times with 1
ml PBS (137 mM NaCl, 2.7 mM KCl, 10 mM Na.sub.2HPO.sub.4, 2 mM
KH.sub.2PO.sub.4, pH 7.4). Then the antibodies were eluted with 450
.mu.l 0.1 M glycine-HCl solution (pH 2.7) for 5 min. Subsequently,
the antibody solution was neutralized with 50 .mu.l 1 M Tris-HCl
solution (pH 8.5). Subsequent blots demonstrated the high
specificity of the purified antibody was detectable (without serum
contamination). The antibodies purified by means of the forisome
technology were used for various purposes (Western Blot,
immunoprecipitation, ELISA, antibody therapy, etc.). The principle
of this purification is shown in FIG. 3; FIG. 4 shows the use of
the interaction between the B-domain and the IgG antibody for
immobilization of artificial forisomes. An artificial forisome
consisting of SEO-F1 subunits coupled to the B-domain binds
fluorescent IgG antibodies.
Example 3 Immobilization of Artificial Forisomes to Technical
Surfaces (Surface Coupling)
[0094] I. The coding sequence of glutathione-S-transferase (GST)
was amplified from sequences within the pGex-3X vector (GE
Healthcare, USA) using the following oligonucleotides
[0095] (restriction sites are underlined).
TABLE-US-00005 GST Ncol Xhol fw: 5'-AGA CCA TGG GAC TCG AGA ATG TCC
CCT ATA CTA GGT TA-3' GST Sall rev: 5'-AGA GTC GAC TTA ACG ACC TTC
GAT CAG ATC-3'
[0096] The fragment was treated with the restriction enzymes
NcoI/SalI and cloned into the NcoI/XhoI-digested pENTR4.TM. cloning
vector, resulting in the vector pENTR4-GST. Subsequently, the
amplicon containing the MtSEO-F1 gene with stop (see SEQ ID NO:1 in
Sequence Listing) was cloned into the NcoI/XhoI-sites of the
resulting vector to generate the vector pENTR4-GST-MtSEO-F1. To
generate the expression vector 424GPD-GST-MtSEO-F1, the vector
pENTR4-GST-MtSEO-F1 was recombined with the yeast vector
424GPD-ccdB (Addgene, USA). The expression vector was transformed
into yeasts cells that already contained a plasmid
(425GPD-MtSEO-F1) to produce artificial forisomes of MtSEO-F1 (see
a) III.). The resulting yeast (425GPD-MtSEO-F1/424GPD-GST-MtSEO-F1)
are corrected for their leucine and tryptophan auxotrophy and
present artificial forisomes with a GST-tag. They were purified as
described in a)V. and the presence of the respective proteins
(MtSEO-F1 and GST-MtSEO-F1) was detectable by SDS-PAGE. It was
further shown that the resulting artificial GST-coupled forisomes
bound to a glutathione-coupled matrix (Glutathione Sepharose 4B,
Amersham Bioscience, USA).
[0097] II. The coding sequence of the B domain of Staphylococcus
aureus protein A was amplified from sequences within the vector
424GPD-ccdB-TAP (Addgene, USA) using the following oligonucleotides
(restriction sites are underlined).
TABLE-US-00006 B domain Ncol fw: 5'-AGACCATGGCGGATAACAAATTCAAC A-3'
B domain Ncol rev: 5'-AGACCATGGCTTTTGGTGCTTGAGCA TC-3' B domain
Xhol fw: 5'-AGACTCGAGAGCGGATAACAAATTCAA C-3' B domain Xhol rev:
5'-AGACTCGAGTCATTTTGGTGCTTGAGC ATC-3'
[0098] The first amplicon was treated with the restriction enzyme
NcoI and cloned into the NcoI restriction site of pENTR4-MtSEO-F1
with stop codon and pENTR4-MtSEO-F4 with stop codon (see a) I) to
generate the vectors pENTR4-B-domain-MtSEO-F1 and
pENTR4-B-domain-MtSEO-F4. The second amplicon was treated with the
restriction enzyme XhoI and cloned into the XhoI restriction site
of the vector pENTR4-MtSEO-F1 without stop codon and
pENTR4-MtSEO-F4 without stop codon (see a)I.) to generate the
vectors pENTR4-MtSEO-F1-B-domain and pENTR4-MtSEO-F4-B-domain. To
produce the expression vectors 424GPD-B-domain-MtSEO-F1,
424GPD-B-domain-MtSEO-F4, 424GPD-MtSEO-F1-B-domain,
424GPD-MtSEO-F4-B domain, the vectors produced were recombined with
the yeast vector 424GPD-ccdB (Addgene, USA).
[0099] The vectors 424GPD-B-domain-MtSEO-F4 and
424GPD-MtSEO-F4-B-domain were transformed into the yeast strain
InvSc1 (Invitrogen, Germany). For selection, the correction of
tryptophan auxotrophy of the yeast strain was used. The fusion
proteins of the B domain and MtSEO-F4 assembled to forisome-like
structures without additional expression of another MtSEO-F
protein.
[0100] The vectors 424GPD-B-domain-MtSEO-F1 and
424GPD-MtSEO-F1-B-domain were transformed into yeast that already
contained a plasmid (425GPD-MtSEO-F1) to produce artificial
forisomes of MtSEO-F1 (see 1.III.). The resulting yeasts (e.g.,
425GPD-MtSEO-F1/424GPD-B-domain-MtSEO-F1) are corrected for their
leucine and tryptoph anauxotrophy and present artificial forisomes
fused to a B-domain. All of the artificial forisomes generated that
contained B-domains bound to IgG-coupled Sepharose (GE Healthcare,
USA).
[0101] 2.3 Preparation and Purification of Artificial SEO-F
Forisomes Containing Two Different SEO-F Proteins
[0102] 2.3.1: Fusion of Amino Acids 1-96 of MtSEO-F4 and Amino
Acids 73-648 of MtSEO-F1.
[0103] The N-terminal MtSEO-F4-fragment and the C-terminal MtSEO-F1
fragment were amplified with the oligonucleotides
TABLE-US-00007 MtSEO-F4 MSLSN Ncol fw 5'-AGACCATGGGATCCCTTTCCAAC
TTAGGAAGTG-3' MtSEO-F4 LISCQ Ncol rev 5'-AGACCATGGCCTGACAAGAAAT
CAGCTT-3' MtSEO-F1 MITTR Ncol fw 5'-AGACCATGGGAATGATAACCACC CCTC-3'
MtSEO-F1 QNGKI Xhol rev 5'-AGACTCGAGGTCATATCTTGCC
ATTCTGTGGAG-3'
[0104] and cloned into the NcoI/XhoI-digestion pENTR4 vector. The
resulting vector pENTR4-MtSEO-F4(1-288 bp)/MtSEO-F1 (219-1944 bp)
was subsequently recombined with the plant expression vector pBatTL
and the yeast expression vector 425GPD-ccdB. The resulting
pBatTL-MtSEO-F4(1-288 bp)/MtSEO-F1 (219-1944 bp) was transformed
into Agrobacterium, which was used to infiltrate N. benthamiana
plants (see Muller et al., 2010). The resulting vector
425GPD-MtSEO-F4(1-288 bp)/MtSEO-F1(219-1944 bp) was transformed
into the yeast strain InvSc1. In both systems, the development of
artificial forisomes was observed microscopically. The purification
was carried out as described above in Example 1 V.
[0105] 2.3.2: Fusion of Amino Acids 1-583 of MtSEO-F1 with Amino
Acids 620-670 of MtSEO-F2.
[0106] The N-terminal MtSEO-F1 fragment and the C-terminal MtSEO-F2
fragment were amplified using the oligonucleotides
TABLE-US-00008 MtSEO-F1 MSLNS Ncol fw 5'-AGACCATGGGATCATTGTCCAAT
GGAACTA-3' MtSEO-F1 FKEYY Xhol rev 5'-AGACTCGAGTGATAGTATTCTT
TGAATGCAAT-3' MtSEO-F2 DTKLS Xhol fw 5'-AGACTCGAGTGATACTAAGCTTT
CAGAGAT-3' MtSEO-F2 DSCCI Xhol 5'-rev AAACTCGAGTCAAATGCAGCAA
CTATCTGGATCATC-3'
[0107] and cloned into the NcoI/XhoI-digested vector pENTR4. The
resulting vector pENTR4-MtSEO-F1 (1-1749 bp)/MtSEO-F2(1860-2010 bp)
was recombined with the plant expression vector pBatTL and the
yeast expression vector 425GPD-ccdB. The generated pBatTL-MtSEO-F1
(1-1749 bp)/MtSEO-F2 (1860-2010 bp) was transformed into
Agrobacterium, which was used to infiltrate N. benthamiana plants
(see Muller et al., 2010). The resulting vector 425GPD-MtSEO-F1
(1-1749 bp)/MtSEO-F2(1860-2010 bp) was transformed into the yeast
strain InvSc1. In both systems, the formation of artificial
forisome could be observed microscopically. The purification was
carried out as described in Example 1 V above.
Sequence CWU 1
1
471647PRTMedicago truncatula 1Met Ser Leu Ser Asn Gly Thr Lys Leu
Pro Asn Pro Phe Asp Leu Asp1 5 10 15Glu Ser Gln Ile Leu Asp Lys Val
Tyr Leu Thr His Leu His Asp Asp 20 25 30Asp Lys Cys Asp Lys Asp Val
Leu Phe His Ile Leu Ser Asn Val Ile 35 40 45Leu Arg Thr Arg Leu Ala
Glu Ser Arg Ala Glu Phe Glu Pro Glu Phe 50 55 60Arg Thr Leu Lys Leu
Ile Ser Cys Gln Met Ile Thr Thr Pro Arg Gly65 70 75 80Glu Arg Tyr
Val His Gln Thr Thr Met Trp Ile Leu Gln Gln Leu Lys 85 90 95Thr Tyr
Ser Trp Asp Ala Lys Ala Leu Ile Ala Leu Ala Ala Phe Thr 100 105
110Leu Glu Tyr Gly Asn Leu Leu Tyr Leu Thr Glu Thr Ser Thr Ser Ser
115 120 125Asp Gln Leu Val Asn Ser Leu Lys Ile Leu Asn Gln Ile Gln
Asn Arg 130 135 140Lys Val Thr Val Pro Ala Thr Asp Leu Val Glu Leu
Ile Met Asp Val145 150 155 160Leu Leu His Ile His Glu Trp Ala Thr
Arg Ser Gly Val Gly Tyr Asn 165 170 175Thr Leu Asp Val Pro Ser Leu
Ser Asp Ala Leu Gln Asp Ile Pro Val 180 185 190Ala Val Tyr Trp Ile
Ile Ala Ser Thr Val Ala Ala Thr Gly Asn Ile 195 200 205Ile Gly Val
Ser Asp Tyr Thr Leu Ser Asp Phe Lys Glu Lys Leu Asn 210 215 220Phe
Val Asp Ser Lys Leu Lys Glu His Leu Lys Leu Ser Lys Trp Gln225 230
235 240Ile Asp Ser Val Glu Glu Tyr Leu Lys Arg Lys Lys Ala Ile Ser
Asn 245 250 255Pro Lys Asp Ile Ile Asp Phe Leu Lys Leu Leu Ile Gln
Arg Asn Gly 260 265 270Asp Asn Leu Leu Ile Tyr Asp Gly Thr Thr Lys
Asn Lys Thr Asp Ile 275 280 285Glu Val Phe Lys Asp Lys Tyr Val Leu
Leu Phe Ile Ser Ser Leu Asn 290 295 300Lys Val Asp Asp Glu Ile Leu
Leu Leu Asn Ser Ile His Asp Arg Leu305 310 315 320Gln Asp Asn Pro
Gln Val Ile Lys Gly Tyr Lys Lys Glu Asp Phe Lys 325 330 335Ile Leu
Trp Ile Pro Ile Trp Asp Val Asp Asp Gln Lys Ile Lys Phe 340 345
350Asp Ser Leu Lys Asn Lys Ile Arg Phe Tyr Ala Val Asp Tyr Phe Ser
355 360 365Glu Leu Pro Gly Ile Arg Leu Ile Arg Glu His Leu Asn Tyr
Ser Asp 370 375 380Lys Pro Ile Val Pro Val Leu Ser Pro Leu Gly Glu
Lys Met Asn Asp385 390 395 400Asp Ala Met Asp Leu Ile Phe Gln Trp
Gly Ile Asp Ala Leu Pro Phe 405 410 415Arg Lys Gln Asp Gly Tyr Asp
Leu Thr Gln Lys Trp Lys Trp Phe Trp 420 425 430Asp Val Thr Lys Arg
Val Asn Leu Gly Ile Gln Val Lys Gly Asp Arg 435 440 445Tyr Ile Phe
Ile Tyr Gly Gly Ser Asp Lys Lys Trp Ile Gln Asp Phe 450 455 460Thr
Leu Ala Leu Glu Lys Thr Lys Arg His Glu Thr Ile Leu Arg Ala465 470
475 480Asp Ala Ile Ile Glu His Tyr His Leu Gly Lys Asp Asp Pro Lys
Ile 485 490 495Val Pro Arg Phe Trp Ile Glu Ile Glu Ser Lys Arg Leu
Lys Lys His 500 505 510Gln Asp Gly Ile Asp Cys Glu Ile Gln Asp Ile
Val Lys Ser Leu Leu 515 520 525Cys Leu Lys Gln Asp Pro Gln Gly Trp
Val Ile Leu Thr Lys Gly Tyr 530 535 540Asn Val Lys Leu Leu Gly His
Gly Glu Pro Met Tyr Gln Thr Leu Ala545 550 555 560Asp Phe Asp Ile
Trp Lys Asp Arg Val Leu Gln Lys Glu Gly Phe Asp 565 570 575Ile Ala
Phe Lys Glu Tyr Tyr Asp Thr Lys Val Lys Asp Thr Tyr Val 580 585
590Lys Gln Pro Cys Glu Ile Ile Asn Val Asp Asn Asn Ile Asn Gly Asn
595 600 605Val Ile Ala Thr Ile Ser Cys Pro Asn Pro Thr Cys Gly Arg
Val Met 610 615 620Glu Val Ser Ser Val Asn Tyr Lys Cys Cys His Arg
Asp Asp Ala Ala625 630 635 640Ala Pro Gln Asn Gly Lys Ile
6452675PRTMedicago truncatula 2Met Ser Thr Ala Leu Ser Tyr Asn Val
Pro Ile Ser Gly Thr Thr Thr1 5 10 15Gln Lys Asn Asp Thr Ser Gln Gln
Gln Lys Ser Gln Leu Pro Asn Pro 20 25 30Phe Lys Leu Glu Asp Ile Glu
Ile Leu Asn Lys Val Tyr Leu Thr His 35 40 45Val Asn Asp Asn Met Lys
Tyr Asp Arg Asp Thr Leu Phe Asn Leu Val 50 55 60Ser Asn Ile Ile Ser
Ala Ser Thr Gln Thr Ser Gly Thr Asn Ser Gly65 70 75 80Leu Asn Thr
Gln Ile Ser Phe Lys Pro Asp Phe Ser Val Leu Lys Arg 85 90 95Ile Ser
Cys Gln Met Ile Thr Thr Arg Gly Thr Ala Glu Cys Ala His 100 105
110Gln Thr Thr Met Trp Val Leu His His Leu Arg Gly Phe Ser Trp Glu
115 120 125Ala Lys Ala Leu Ile Thr Leu Ala Ala Phe Ser Leu Glu Tyr
Gly Ala 130 135 140Ile Met His Leu His Arg Ile Gln Ser Ser Asp Thr
Leu Gly Asn Ser145 150 155 160Leu Lys Gln Leu Ser Gln Val Gln Phe
Arg Lys Val Pro Ala Asp Ile 165 170 175Thr Glu Leu Val Thr Phe Leu
Leu Gln Val Leu Gln Asp Ile Lys Thr 180 185 190Trp Ala Ala Trp Ser
Ala Phe Gly Tyr Asp Leu Asp Asp Val Asn Ser 195 200 205Leu Pro Asp
Ala Met Gln Trp Ile Pro Leu Val Val Tyr Trp Thr Val 210 215 220Ala
Thr Ile Val Ala Cys Thr Gly Asn Leu Val Gly Ile Ser Glu His225 230
235 240Lys Leu Ser Asp Tyr Val Lys Ser Leu Ser Asp Val Val Lys Glu
Leu 245 250 255Arg Arg His Leu Lys Ser Cys Glu Leu Glu Ile Gly Lys
Ile His Glu 260 265 270Asn Glu Asn Leu Leu Lys Asp Ser Asp Asn Ile
Lys Asp Val Val Ala 275 280 285Phe Leu Arg Leu Leu Ile Lys Gly Asn
Gly Thr Asp Gln Ile Pro Pro 290 295 300Ile Phe Ile Gly Asn Asp Gln
Val Lys Thr Gly Ile Glu Val Phe Lys305 310 315 320Lys Lys His Val
Leu Leu Phe Val Ser Gly Leu Asp Thr Leu Arg Asp 325 330 335Glu Ile
Leu Leu Leu Asn Ser Ile Tyr Lys Arg Leu Gln Asp Lys Pro 340 345
350Gln Glu Val Leu Lys Gly Ser Phe Lys Lys Glu Asp Phe Lys Ile Leu
355 360 365Trp Ile Pro Ile Val Asn Lys Trp Asp Glu Asp Arg Lys Lys
Glu Phe 370 375 380Lys Asn Leu Lys Glu Ser Met Lys Trp Tyr Val Leu
Glu His Phe Ser385 390 395 400Glu Leu Pro Gly Arg Gly Ile Ile Lys
Lys Lys Leu Asn Tyr Asp Ile 405 410 415Gly Tyr Pro Pro Ile Leu Ala
Val Ile Asn Pro Gln Gly Asp Ile Ile 420 425 430Asn Lys Asp Ala Met
Glu Ile Ile Phe Gln Trp Gly Ile Asp Ala Phe 435 440 445Pro Phe Arg
Ile Ser Asp Ala Glu Asp Ile Phe Lys Lys Trp Glu Trp 450 455 460Phe
Trp Lys Leu Met Lys Lys Val Asp Val Asn Ile Glu Lys Met Ser465 470
475 480Trp Asp Arg Tyr Ile Phe Ile Tyr Gly Gly Asn Asp Pro Lys Trp
Ile 485 490 495Gln Asp Phe Thr Arg Ala Ile Gly Ser Ile Lys Lys His
Gln Thr Ile 500 505 510Gln Asn Val Asp Val Asn Ile Asp Tyr His Gln
Leu Gly Lys Asn Asn 515 520 525Pro Thr Glu Ile Pro Tyr Phe Trp Met
Gly Ile Asp Gly Arg Lys Gln 530 535 540Gln Asn Lys Thr Cys Lys Asp
Ser Val Asp Cys Glu Ile Gln Thr Ala545 550 555 560Val Lys Lys Leu
Leu Cys Leu Lys Gln Asp Pro Leu Gly Trp Val Leu 565 570 575Leu Ser
Arg Gly Arg His Val Thr Val Phe Gly His Gly Glu Pro Met 580 585
590Tyr Gln Thr Val Ala Asp Phe Asp Lys Trp Lys Asn Asn Val Val Glu
595 600 605Lys Glu Ser Phe Asp Glu Ala Phe Lys Glu Tyr Tyr Asp Thr
Lys Leu 610 615 620Ser Glu Ile Ser Ser Ser Ala Ser Cys Ala Val Asn
Ser Ser Asp Val625 630 635 640Leu Ala Thr Ile Thr Cys Pro Asn Pro
Phe Cys Gly Arg Val Met Glu 645 650 655Val Thr Ser Val Asn Tyr Lys
Cys Cys His Arg Asp Asp Pro Asp Ser 660 665 670Cys Cys Ile
6753701PRTMedicago truncatula 3Met Ser Ser Ser Met Ala Pro Ser Ser
Leu Val Ser Asn Val Ser Ala1 5 10 15Tyr Ser Gln Gln Ala Arg Thr Ser
Asn Pro Leu Ala Trp Ser Asp Asp 20 25 30Lys Ile Leu Glu Thr Val Tyr
Leu Thr His Val His Thr Gly Glu Arg 35 40 45Tyr Asp Val Glu Ser Leu
Phe Asn Leu Thr Ser Asn Ile Leu Lys Arg 50 55 60Ser Thr Ala Val Ala
Asp Ser Val Ala Ser Lys Thr Gly Thr Pro Val65 70 75 80Gly Leu Val
Glu Asp Arg Leu Pro Leu Ser Gly Tyr Glu Pro Pro Ile 85 90 95Arg Lys
Leu Lys His Ile Ser Ala Gln Met Met Ser Thr Leu Pro Gly 100 105
110Glu His His Ala His Met Thr Thr Met Ser Ile Leu Asp Gln Leu Lys
115 120 125Ser His Thr Trp Asp Gly Lys Ala Ile Phe Ala Leu Ala Ala
Phe Ser 130 135 140Leu Glu Tyr Gly Asn Phe Trp His Leu Val Gln Thr
Pro Ser Gly Asp145 150 155 160Thr Leu Gly Arg Ser Leu Ala Thr Met
Asn Arg Val Gln Ser Val Asp 165 170 175Lys Asn Arg Gln Ala Ile Ala
Asp Tyr Asn Ser Leu Val Lys Asn Leu 180 185 190Leu Phe Ala Val Glu
Cys Ile Thr Glu Leu Glu Lys Leu Ser Thr Lys 195 200 205Gly Tyr Glu
His Lys Asp Val Pro Ala Leu Ser Glu Ala Met Gln Glu 210 215 220Ile
Pro Val Ala Val Tyr Trp Ala Ile Ile Thr Ala Ile Ile Cys Ala225 230
235 240Asn His Leu Asp Leu Leu Phe Gly Asp Ser Asp Asp Arg Tyr Glu
Leu 245 250 255Ser Ser Tyr Asp Val Lys Leu Ala Ser Ile Val Ser Lys
Leu Lys Ala 260 265 270His Leu Thr Arg Ser Arg Lys His Ile Gly Glu
Leu Glu Asp Tyr Trp 275 280 285Arg Arg Lys Arg Val Leu Gln Thr Pro
Thr Glu Ile Val Glu Val Leu 290 295 300Lys Val Leu Val Phe His Asn
Glu Ile Gln Asp Pro Leu Val Phe Asp305 310 315 320Gly Leu Asn Arg
Gln Met Val Ser Ile Glu Val Phe Arg Lys Lys His 325 330 335Val Leu
Val Phe Ile Ser Gly Leu Asp Ser Ile Arg Asp Glu Ile Arg 340 345
350Leu Leu Gln Ser Ile Tyr Val Gly Leu Gln Glu Glu Pro Arg Glu Leu
355 360 365Lys Gly Tyr Arg Lys Glu Asp Phe Lys Ile Leu Trp Ile Pro
Ile Val 370 375 380Asp Asp Trp Thr Leu Leu His Lys Ala Glu Phe Asp
Asn Leu Lys Leu385 390 395 400Glu Met Pro Trp Tyr Val Val Glu Tyr
Phe Tyr Pro Leu Ala Gly Ile 405 410 415Arg Leu Ile Arg Glu Asp Leu
Ser Tyr Lys Asn Lys Pro Ile Leu Pro 420 425 430Val Leu Asn Pro Leu
Gly Arg Ile Val Asn His Asn Ala Met His Met 435 440 445Ile Phe Val
Trp Gly Ile Asp Ala Phe Pro Phe Arg Pro Thr Asp Asp 450 455 460Glu
Ser Leu Thr Gln Lys Trp Asn Trp Phe Trp Ala Glu Met Lys Lys465 470
475 480Val Tyr Pro Arg Leu Gln Asp Leu Ile Lys Gly Asp Thr Phe Ile
Phe 485 490 495Ile Tyr Gly Gly Thr Asp Pro Lys Trp Thr Gln Asp Phe
Ala Leu Ala 500 505 510Ile Glu Lys Ile Lys Arg His Glu Ile Thr Arg
Lys Ala Asp Ala Val 515 520 525Ile Glu His Phe His Phe Gly Lys Glu
Asp Lys Arg Ile Val Pro Arg 530 535 540Phe Trp Ile Gly Ile Glu Ser
Leu Phe Ala Asn Met Ile Gln Lys Lys545 550 555 560His Lys Asp Pro
Thr Ile Asp Glu Ile Lys Ser Leu Leu Cys Leu Lys 565 570 575Gln Asp
Gln Pro Gly Trp Val Leu Leu Ser Lys Gly Pro Asn Val Lys 580 585
590Leu Leu Gly Arg Gly Asp Gln Met Tyr Ala Thr Ala Val Asp Phe Glu
595 600 605Ile Trp Lys Glu Lys Val Leu Glu Lys Ala Gly Phe Asp Val
Ala Phe 610 615 620Lys Glu Tyr Tyr Glu Arg Lys Arg Arg Glu Tyr Pro
Val Ala Cys Ala625 630 635 640Asn Met Gln Leu Ala Asn Tyr Pro Ser
Asp Ile Leu Asp Pro Ile Tyr 645 650 655Cys Pro Asp Ser Asn Cys Gly
Arg Ser Met Glu Ile Ala Ser Val Ser 660 665 670Tyr Lys Cys Cys His
Gly His Thr His Glu Asn Ala Glu Val Ala Pro 675 680 685Ala Glu Ser
Gly Gly Phe Val Gln Ile Glu Lys Arg Ser 690 695 7004671PRTMedicago
truncatula 4Met Ser Leu Ser Asn Leu Gly Ser Ala Thr Ala Thr Asn Ser
Ser Leu1 5 10 15Asn Gln Lys Asn Ala Thr Asn Ser Leu Gln Asn Lys Ala
Asn Phe Leu 20 25 30Pro Asn Pro Phe Asp Leu His Asp Pro Gln Ile Leu
Asp Arg Val Tyr 35 40 45Leu Thr His Val Thr Asp Asp Glu Phe Cys Asp
Thr Asn Ile Ile Phe 50 55 60Glu Leu Val Ser Ser Val Val Leu Gln Thr
Ile Pro Lys Ile Ser Val65 70 75 80Thr Ser Phe Lys Pro Glu Phe Pro
Thr Leu Lys Leu Ile Ser Cys Gln 85 90 95Met Ile Thr Thr Arg Asn Asp
Pro His Cys Val His Gln Thr Thr Leu 100 105 110Trp Ile Leu Gln Asn
Leu Arg Ser Tyr Ser Trp Asp Ala Lys Ala Leu 115 120 125Ile Thr Leu
Ala Ala Phe Thr Leu Glu Tyr Gly Asn Tyr Leu Gln Leu 130 135 140Asn
Arg Val Thr Thr Thr Asp Thr Leu Gly Asn Ser Leu Arg Val Leu145 150
155 160Asn Gln Val Gln Thr Arg Lys Ile Ser Asn Asp Val Thr Glu Leu
Val 165 170 175Lys Tyr Ile Val Asp Met Leu Ile His Leu Asn Val Trp
Ala Thr Trp 180 185 190Ser Ala Asp Gly Tyr Asp Pro Val Asp Val Pro
Ala Leu Thr Asp Ala 195 200 205Leu Gln Glu Ile Pro Val Phe Val Tyr
Trp Thr Ile Ala Ser Ile Val 210 215 220Ala Ser Thr Gly Asn Leu Val
Gly Val Ser Asp Tyr Lys Leu Ser Ala225 230 235 240Tyr Lys Glu Arg
Leu Ser Arg Val Val Glu Glu Leu Val Lys His Leu 245 250 255Ala Thr
Cys Glu Arg Gln Ile Arg Asn Val Asp Asp Leu Thr Ser Arg 260 265
270Thr Asn Asn Tyr Arg Lys Pro Lys Asp Ile Val Asp Cys Leu Lys Ala
275 280 285Leu Ile His Arg Asn Gly Thr Asp Ile Pro Gln Ile Tyr Gln
Gly Asn 290 295 300Val Gln Val Lys Ser Gly Leu Asp Ile Phe Lys Gln
Lys His Val Leu305 310 315 320Leu Phe Ile Ser Ser Leu Asp Arg Ile
Gln Asp Glu Ile Thr Leu Leu 325 330 335Asn Ser Ile Tyr Glu Arg Leu
Gln Glu Asn Pro Lys Glu Ser Lys Gly 340 345 350Phe Met Lys Glu Asp
Phe Lys Ile Leu Trp Ile Pro Ile Val Lys Lys 355 360 365Trp Asp Asp
Ile Gln Ile Glu Asn Phe Lys Ala Leu Lys Ser Gly Ile 370 375 380Lys
Trp Tyr Val Val Glu Tyr Phe Ser Glu Leu Pro Gly Leu Lys Ile385 390
395 400Ile Lys Asp Pro Glu Leu Ile Gly Tyr Ile Asp Asn Pro Ile Ile
Pro 405 410 415Val Phe Asn Pro Lys Gly Ile Ile Thr Asn Glu Asp Ala
Met Asp Leu 420 425 430Ile Phe Gln Trp Gly Ile Asp Ala Phe Pro Phe
Arg Lys Ser Asp Gly 435
440 445Asn Asp Leu Lys Leu Lys Trp Asn Trp Leu Trp Asp Val Ile Lys
Lys 450 455 460Ala Thr Pro Gly Leu Leu Val Lys Val Asp Arg Tyr Ile
Phe Ile Tyr465 470 475 480Gly Gly Thr Asn Lys Lys Trp Ile Gln Asp
Phe Thr Leu Glu Leu Glu 485 490 495Lys Ile Lys Arg His Glu Thr Ile
Lys Arg Ala Asp Val Ile Ile Glu 500 505 510Asn Tyr Gln Val Gly Lys
Asp Asp Pro Asn Arg Val Pro Ser Phe Trp 515 520 525Met Gly Ile Glu
Arg Lys Lys Gln Asn Lys Lys His Gln Glu Thr Val 530 535 540Asp Cys
Lys Ile Gln Glu Ile Val Lys Asp Leu Phe Cys Leu Arg Arg545 550 555
560Asp Pro Gln Gly Trp Ile Ile Leu Ser Lys Gly His Ser Ile Lys Leu
565 570 575Leu Gly His Gly Glu Pro Ala Tyr Gln Thr Leu Val Glu Phe
Gln Asn 580 585 590Trp Lys Asp Lys Val Leu Glu Lys Glu Gly Phe Asp
Ile Ala Phe Lys 595 600 605Glu Tyr Tyr Gln Met Lys Ala Lys Glu Ile
Ser Gly Arg Glu Pro Cys 610 615 620Glu Val Leu Asn Val Asp Thr Tyr
Ser Ser Asn Val Ile Gly Thr Ile625 630 635 640Ser Cys Pro Asn Pro
Met Cys Gly Arg Val Met Glu Val Ser Ser Ile 645 650 655His Tyr Lys
Cys Cys His Arg Asp Glu Pro Asn Asn Leu Gly Val 660 665
6705651PRTDipteryx panamensis 5Met Ser Leu Ser Asn Gly Ala Ser Ser
Thr Thr Leu Ser Gln Gln Lys1 5 10 15Thr Gln Leu Pro Asn Pro Phe Asp
Leu Thr Asp Ser Gln Ile Leu Asp 20 25 30Lys Val Tyr Leu Ser His Ala
His Asp Asp Glu Glu Cys Asp Arg Asp 35 40 45Thr Leu Leu Asp Leu Val
Ser Ile Ile Ile Leu Lys Ser Gln Arg Pro 50 55 60Ile Pro Leu Ala Lys
Tyr Lys Pro Glu Phe Pro Thr Leu Lys Leu Ile65 70 75 80Ser Cys Gln
Met Ile Thr Thr Arg Gly Val Val His Cys Ala His Gln 85 90 95Thr Thr
Met Trp Ile Leu Gln His Leu Arg Ser Phe Ser Trp Asp Ala 100 105
110Lys Ala Leu Ile Thr Val Ala Ala Phe Ser Leu Glu Tyr Gly Asn Phe
115 120 125Arg His Leu Gln Ile Pro Thr Ser Asp Gln Leu Gly Asn Ala
Leu Lys 130 135 140Gln Leu Asn Gln Val Asn Asn Gly Lys Leu Ser Asp
Asp Ile Thr Glu145 150 155 160Leu Ala Thr Val Thr Val Arg Val Leu
Gln His Leu Lys Glu Trp Ala 165 170 175Ala Trp Ser Ala Ala Gly Tyr
Asp Thr Glu Asp Val Pro Ala Leu Ser 180 185 190Asp Ala Leu Gln Val
Ile Pro Phe Val Val Tyr Trp Thr Ile Ala Ser 195 200 205Ile Val Ala
Ser Thr Gly Asn Leu Ile Gly Val Ser Asp Tyr Lys Leu 210 215 220Ser
Asp Phe Lys Asp Lys Leu Asp Arg Val Val Lys Thr Leu Asn Asp225 230
235 240His Leu Asp Glu Cys Lys Lys Gln Ile Asp Val Ile Asp Asn Tyr
Asn 245 250 255Trp Arg Arg Lys Ala Phe Glu Asn Pro Lys Asp Ile Val
Asp Leu Leu 260 265 270Lys Leu Leu Ile His Ser Lys Gly Ser Pro Ile
Pro Gln Ile Tyr Asp 275 280 285Gly Arg Thr Thr Thr Lys Thr Asp Ile
Glu Val Phe Lys Gln Lys Tyr 290 295 300Val Leu Leu Phe Ile Ser Ser
Leu Asp Ser Ile Asp Asp Glu Ile Arg305 310 315 320Leu Leu Asn Ser
Ile Tyr Asp Arg Leu Lys Glu Asp Pro Lys Glu Val 325 330 335Lys Gly
Phe Asn Lys Glu Asp Phe Lys Ile Leu Trp Ile Pro Ile Val 340 345
350Asp Ser Trp Asp Lys Asp Ser Val Glu Lys Tyr Lys Thr Leu Lys Thr
355 360 365Lys Ile Lys Trp Tyr Ala Val Glu Phe Leu Ser Leu Val Pro
Gly Ile 370 375 380Arg Leu Val Arg Glu Val Leu Lys Phe Glu Thr Lys
Pro Ile Ile Pro385 390 395 400Val Ile Ser Pro Gln Gly Lys Arg Ile
Asn Asp Asn Ala Met Asp Ile 405 410 415Ile Phe Glu Trp Gly Val Asp
Ala Phe Pro Phe Arg Lys Glu Asp Gly 420 425 430Asp Gln Leu Thr Gln
Lys Trp Lys Trp Phe Trp Asp Val Ile Lys Lys 435 440 445Val Asn Pro
Ala Ile Gln Val Glu Pro Glu Ser Tyr Ile Phe Ile Tyr 450 455 460Gly
Gly Thr Asp Asn Lys Trp Ile Gln Asp Phe Thr Leu Ala Val Asp465 470
475 480Lys Val Lys Arg His Asp Thr Ile Lys Arg Ala Asp Ala Ile Ile
Glu 485 490 495His His Gln Leu Ala Lys Asp Asp Ser Ile Val Pro Arg
Phe Trp Ile 500 505 510Gly Ile Glu Ser Lys Thr His Lys Lys His Gln
Glu Ala Val Asp Cys 515 520 525Gln Ile Gln Thr Ile Val Lys Ser Leu
Leu Cys Leu Lys Arg Asp Pro 530 535 540Gln Gly Trp Ala Ile Leu Ser
Lys Gly Asn Asn Val Lys Ile Leu Gly545 550 555 560His Gly Glu Pro
Met Leu Gln Thr Leu Thr Gln Phe Glu Ser Trp Lys 565 570 575Asp Lys
Val Leu Glu Lys Glu Gly Phe Asp Ile Ala Leu Lys Glu Phe 580 585
590Tyr Asp Gly Lys Val Glu Ser Leu Ser Tyr Arg Gln Pro Cys Glu Tyr
595 600 605Leu Asn Ile Asp Ser Gln Ser Ser Ser Val Ile Ala Thr Ile
Thr Cys 610 615 620Pro Asn Pro Thr Cys Gly Arg Val Met Glu Val Thr
Ser Val Asn Tyr625 630 635 640Arg Cys Cys His Arg Asp Gly Gln Lys
Ile Cys 645 6506668PRTLotus japonicus 6Met Ser His Val Pro Lys Ala
Ala Ser Asn Gly Ala Leu Ile Gln His1 5 10 15Ser Gly Thr Ser Pro Asn
Gln Lys Ala Tyr Leu Pro Ser Pro Phe Glu 20 25 30Leu Lys Asp Pro Gln
Ile Leu Asp Arg Val Tyr Leu Thr His Val Asn 35 40 45Asp Asp Glu Ile
Cys Asp Thr Lys Ile Leu Phe Asp Leu Val Ser Thr 50 55 60Val Val Leu
Gln Ser Val Ser Gln Ile Pro Ala Thr Ser Phe Lys Pro65 70 75 80Glu
Phe Ser Thr Leu Lys Leu Ile Ser Cys Gln Met Ile Thr Thr Arg 85 90
95Asn Ala Asp His Cys Val His Gln Thr Thr Met Trp Ile Leu Gln Asn
100 105 110Leu Arg Ser Tyr Ser Trp Asp Ala Lys Ala Ile Ile Thr Leu
Ala Ala 115 120 125Phe Thr Leu Glu Tyr Gly Asn Tyr Leu His Leu Ser
Arg Ala Ala Val 130 135 140Ala Asp Thr Leu Gly Ser Ser Leu Arg Gln
Leu Asn Gln Val His Thr145 150 155 160Arg Lys Val Pro Ala Asp Ile
Thr Lys Leu Val Thr Phe Ile Val His 165 170 175Ala Phe Gln His Leu
Lys Glu Trp Ala Thr Trp Ala Asp Glu Gly Tyr 180 185 190Glu Pro Glu
Glu Val Pro Ser Leu Thr Glu Ala Leu Gln His Val Pro 195 200 205Val
Ala Val Tyr Trp Thr Ile Ala Ala Ile Val Ala Ser Thr Gly Asn 210 215
220Leu Val Gly Val Ser Thr Tyr Asn Leu Gln Gly Tyr Ile Asp Arg
Leu225 230 235 240Asp Glu His Val Thr Lys Leu Ala Glu Gln Leu Asn
Ser Cys Lys Leu 245 250 255Gln Ile Gly His Val Asp Asp Tyr Phe Asn
Arg Arg Lys Ile Phe Asp 260 265 270Lys Pro Lys Asp Ile Val Asp Leu
Leu Lys Ala Leu Ile His Arg Asn 275 280 285Gly Ala Gln Gly Pro Gln
Ile Phe Glu Gly Gly Val Ile Val Lys Gln 290 295 300Gly Leu Glu Val
Phe Arg Gln Lys His Val Leu Leu Phe Ile Ser Gly305 310 315 320Leu
Asn Ser Ile Val Asp Glu Ile Leu Leu Leu Asn Ser Ile Tyr Asn 325 330
335Arg Leu Gln Asp Asn Pro Thr Glu Val Ile Lys Gly Phe Lys Lys Glu
340 345 350Asp Phe Lys Ile Leu Trp Val Pro Met Val Asp Arg Trp Asp
Glu Ala 355 360 365Ser Arg Glu Gln Tyr Leu Asn Thr Trp Lys Arg Gly
Ile Lys Trp Tyr 370 375 380Ile Val Glu Tyr Phe Phe Glu Leu Pro Gly
Arg Arg Ile Ile Thr Asp385 390 395 400Pro Glu Arg Leu Gly Tyr Glu
Gly Asn Pro Ile Ile Pro Val Phe Asn 405 410 415Pro Gln Gly Met Leu
Thr Asn Asp Asn Ala Met Asp Leu Ile Phe Gln 420 425 430Trp Gly Ile
Asp Ala Phe Pro Phe Arg Lys Ser Asp Gly Ile Asp Leu 435 440 445Thr
Leu Lys Trp Lys Trp Leu Trp Asp Ile Ile Lys Lys Ala Thr Pro 450 455
460Gly Leu Gln Val Lys Val Asp Arg Tyr Ile Phe Ile Phe Gly Ser
Thr465 470 475 480Asn Asn Lys Trp Ile Gln Asp Phe Thr Ile Glu Leu
Asp Lys Leu Lys 485 490 495Arg Asn Glu Thr Val Lys Arg Ala Asp Val
Ile Ile Glu Gln Tyr Gln 500 505 510Leu Gly Lys Asp Asp Pro Asn Arg
Val Pro Ser Phe Trp Met Gly Val 515 520 525Glu Arg Lys Lys Gln Asn
Lys Lys His Gln Glu Ala Val Asp Cys Glu 530 535 540Ile Gln Gly Ile
Val Lys Ser Leu Phe Cys Leu Lys Arg Asp Pro Gln545 550 555 560Gly
Trp Val Ile Leu Ser Lys Gly His Asn Ile Lys Leu Leu Gly His 565 570
575Gly Glu Ala Val Tyr Gln Thr Val Val Glu Phe Pro Asn Trp Lys Glu
580 585 590Lys Val Leu Glu Arg Glu Gly Phe Asp Ile Ala Phe Lys Glu
Tyr Tyr 595 600 605Asp Ile Lys Ala Lys Glu Ile Ser Ala Arg Gln Pro
Cys Glu Ile Ile 610 615 620Asn Val Asp Ser Tyr Ser Ala Asn Val Ile
Ala Thr Ile Thr Cys Pro625 630 635 640Asn Pro Met Cys Gly Arg Val
Met Glu Val Thr Ser Val Asn Tyr Lys 645 650 655Cys Cys His Ser Asp
Ala Pro Asn Gly Phe Gly Ile 660 6657685PRTPisum sativum 7Met Ser
Phe Ser Asn Ser Ala Ala Ala Ala Thr Gly Thr Leu Val Gln1 5 10 15His
Gly Gly Asn Ala Thr Asn Asn Asn Ser Leu Ile Gln Lys Asn Ala 20 25
30Thr Ser Pro His Ser His His Lys Ala Asn Asn Tyr Leu Pro Asn Pro
35 40 45Phe Glu Leu His Asp Ser Gln Ile Leu Asp Lys Val Tyr Leu Thr
His 50 55 60Val Thr Asp Asp Gln Phe Cys Asp Thr Asp Ile Ile Phe Asp
Leu Val65 70 75 80Ser Thr Leu Val Leu Gln Thr Asn Thr Gln Ile Pro
Val Thr Gly Phe 85 90 95Lys Pro Asp Phe Pro Thr Leu Lys Leu Ile Ser
Cys Gln Met Ile Thr 100 105 110Thr Arg Ser Ala Ala His Cys Val His
Gln Thr Thr Leu Trp Ile Leu 115 120 125Gln Asn Leu Arg Ser Tyr Ser
Trp Asp Ala Lys Ala Leu Ile Thr Leu 130 135 140Ala Ala Phe Thr Leu
Glu Tyr Gly Asn Tyr Leu His Leu Thr Arg Val145 150 155 160Thr Ala
Thr Asp Pro Ile Gly Asn Ser Leu Arg Gln Leu Asn Gln Ile 165 170
175Gln Thr Arg Asn Ile Ser Thr Asp Ile Thr Glu Leu Val Ser Phe Ile
180 185 190Val His Gln Leu Leu His Leu Lys Glu Trp Ala Thr Trp Ser
Ala Glu 195 200 205Gly Tyr Asp Pro Glu Asp Val Pro Ala Leu Thr Glu
Ala Leu Gln Glu 210 215 220Ile Pro Val Phe Val Tyr Trp Thr Ile Ala
Ser Ile Val Ala Ser Thr225 230 235 240Gly Asn Leu Val Gly Val Ser
Asp Tyr Lys Leu Ser Glu Tyr Arg Glu 245 250 255Arg Leu Ser Gly Ile
Val Gln Lys Leu Val Val His Leu Asn Asn Cys 260 265 270Lys Leu Gln
Ile Ser Tyr Ile Asp Asp Leu Phe Asn Arg Lys Lys Ile 275 280 285Phe
Asp Lys Pro Lys Asp Ile Val Asp Cys Leu Lys Ala Leu Ile His 290 295
300Arg Asn Gly Thr Asp Ser Pro Gln Ile Tyr Glu Gly Ala Ile His
Val305 310 315 320Lys Thr Gly Leu Glu Val Phe Arg Asn Lys His Val
Leu Val Phe Ile 325 330 335Ser Ser Leu Asp Ser Ile Glu Asp Glu Ile
Ser Leu Leu Asn Ser Ile 340 345 350Tyr Glu Arg Leu Gln Glu Asn Ser
Lys Glu Ser Ile Lys Gly Phe Lys 355 360 365Lys Glu Asp Phe Lys Ile
Leu Trp Ile Pro Ile Val Asn Asn Trp Asp 370 375 380Asp Ile Arg Lys
Glu Arg Phe Arg Ala Leu Lys Ser Gly Ile Lys Trp385 390 395 400Tyr
Ala Val Glu Tyr Phe Tyr Glu Leu Pro Gly His Arg Ile Ile Thr 405 410
415Asp Pro Glu Arg Ile Gly Tyr Ile Gly Asn Pro Ile Ile Pro Val Phe
420 425 430Asn Pro Gln Gly Tyr Ile Thr Asn Ile Asp Ala Met Asp Leu
Ile Phe 435 440 445Gln Trp Gly Ile Asp Ala Phe Pro Phe Arg Lys Ser
Asp Gly Ile Asp 450 455 460Leu Thr Leu Lys Trp Lys Trp Leu Trp Asp
Val Ile Lys Lys Ala Thr465 470 475 480Pro Gly Leu Gln Val Lys Gly
Asp Arg Tyr Ile Phe Ile Tyr Gly Gly 485 490 495Thr Asn Asn Lys Trp
Ile Gln Asp Phe Thr Leu Glu Leu Glu Lys Ile 500 505 510Lys Arg His
Glu Ile Leu Lys Arg Ala Asp Val Ile Ile Glu Asn Tyr 515 520 525Gln
Leu Gly Lys Glu Asp Pro Asn Arg Val Pro Ser Phe Trp Ile Gly 530 535
540Val Glu Arg Lys Lys Gln Asn Lys Lys His Gln Glu Ala Leu Asp
Cys545 550 555 560Glu Ile Gln Asp Ile Val Lys Ser Leu Phe Cys Leu
Lys Arg Asp Pro 565 570 575Gln Gly Trp Ile Ile Leu Ser Lys Gly Gln
Asn Ile Lys Leu Leu Gly 580 585 590His Gly Glu Pro Ala Tyr Gln Thr
Leu Ala Glu Phe Gln Asn Trp Lys 595 600 605Asp Arg Val Leu Glu Lys
Glu Gly Phe Asp Ile Ala Phe Lys Glu Tyr 610 615 620Tyr Glu Met Lys
Ala Lys Glu Leu Ser Gly Arg Gln Pro Cys Glu Val625 630 635 640Val
Asn Val Asp Thr Tyr Ser Ser Asn Val Ile Ala Thr Ile Ala Cys 645 650
655Pro Asn Pro Met Cys Gly Arg Val Met Glu Val Ser Ser Ala His Tyr
660 665 670Lys Cys Cys His Arg Asp Glu Pro Asn Asn Phe Gly Val 675
680 6858684PRTVicia faba 8Met Ser Phe Ser Asn Ser Pro Ala Ala Ala
Thr Gly Thr Leu Val Gln1 5 10 15His Gly Gly Asn Gly Thr Asn Asn Ser
Leu Ile Gln Lys Thr Ala Thr 20 25 30Ser Ser His Pro His His Lys Ala
Asn Asn Tyr Leu Pro Asn Pro Phe 35 40 45Glu Leu His Asp Ser His Ile
Leu Asp Lys Val Tyr Leu Thr His Val 50 55 60Thr Asp Asp Glu Phe Cys
Asp Thr Asp Ile Ile Phe Asp Leu Val Ser65 70 75 80Thr Leu Ile Leu
Gln Ser Asn Thr Gln Ile Pro Val Thr Gly Phe Lys 85 90 95Pro Asp Phe
Pro Thr Leu Lys Leu Ile Ser Cys Gln Met Ile Thr Thr 100 105 110Arg
Ser Val Ala His Cys Val His Gln Thr Thr Leu Trp Ile Leu Gln 115 120
125Asn Leu Arg Ser Tyr Ser Trp Asp Ala Lys Ala Leu Ile Thr Leu Ala
130 135 140Ala Phe Thr Leu Glu Tyr Gly Asn Tyr Leu Gln Leu Asn Arg
Val Thr145 150 155 160Ala Thr Asp Pro Ile Gly Asn Ser Leu Arg Gln
Leu Asn Gln Ile Gln 165 170 175Thr Arg Lys Ile Ser Thr Asp Ile Pro
Glu Leu Val Asn Phe Ile Val 180 185 190His Lys Leu Leu His Leu Lys
Glu Trp Ala Ala Trp Ser Ala Glu Gly 195 200 205Tyr Asp Pro Glu Asp
Val Pro Ala Leu Thr Glu Ala Leu Gln Glu Ile 210 215 220Pro Val Phe
Val Tyr Trp Thr Ile Ala Ser Ile Val Ala Ser Thr Gly225
230 235 240Asn Leu Val Gly Val Ser Asp Tyr Asn Leu Ser Glu Tyr Arg
Glu Arg 245 250 255Leu Ser Gly Ile Val Gln Lys Leu Val Val His Leu
Asn Asn Cys Lys 260 265 270Leu Gln Ile Ser Tyr Ile Asp Asp Leu Phe
Asn Arg Arg Lys Ile Phe 275 280 285Asp Lys Pro Lys Asp Ile Val Asp
Cys Leu Lys Ala Leu Ile His His 290 295 300Asn Gly Ala Asp Ser Pro
Gln Ile Tyr Glu Gly Ala Ile His Val Lys305 310 315 320Thr Gly Leu
Glu Val Phe Arg His Lys His Val Leu Met Phe Ile Ser 325 330 335Ser
Leu Asp Ser Ile Glu Asp Glu Ile Ser Leu Leu Asn Ser Ile Tyr 340 345
350Glu Arg Leu Gln Glu Asn Ser Lys Glu Ser Ile Lys Gly Phe Lys Lys
355 360 365Glu Asp Phe Lys Ile Leu Trp Ile Pro Ile Val Asn Asn Trp
Asp Asp 370 375 380Ile Arg Lys Glu Arg Phe Arg Ala Leu Lys Ser Gly
Ile Lys Trp Tyr385 390 395 400Ala Val Glu Tyr Phe Tyr Glu Leu Pro
Gly His Arg Ile Ile Thr Asp 405 410 415Pro Glu Arg Ile Gly Tyr Ile
Gly Asn Pro Ile Ile Pro Val Phe Asn 420 425 430Pro His Gly Tyr Ile
Thr Asn Ile Asp Ala Met Asp Leu Ile Phe Gln 435 440 445Trp Gly Ile
Asp Ala Phe Pro Phe Arg Lys Ser Asp Gly Ile Asp Leu 450 455 460Thr
Phe Lys Trp Lys Trp Leu Trp Asp Val Ile Lys Lys Ala Thr Pro465 470
475 480Gly Leu Gln Val Lys Gly Asp Arg Tyr Ile Phe Ile Tyr Gly Gly
Thr 485 490 495Asn Asn Lys Trp Ile Gln Asp Phe Thr Leu Glu Leu Glu
Lys Ile Lys 500 505 510Arg His Glu Thr Leu Lys Arg Ala Asp Val Ile
Ile Asp Asn Tyr Gln 515 520 525Leu Gly Lys Asp Asp Pro Asn Arg Val
Pro Ser Phe Trp Ile Gly Val 530 535 540Glu Arg Lys Lys Gln Asn Lys
Lys His Gln Glu Ala Val Asp Cys Glu545 550 555 560Ile Gln Asp Ile
Val Lys Ser Leu Phe Cys Leu Lys Arg Asp Pro Gln 565 570 575Gly Trp
Val Ile Leu Ser Lys Gly Gln Asn Ile Lys Leu Leu Gly His 580 585
590Gly Glu Pro Ala Tyr Gln Thr Leu Ala Glu Phe Gln Asn Trp Lys Asp
595 600 605Arg Val Leu Glu Lys Glu Gly Phe Asp Ile Ala Phe Lys Glu
Tyr Tyr 610 615 620Glu Met Lys Ala Lys Glu Leu Ser Gly Arg Glu Pro
Cys Glu Val Val625 630 635 640Asn Val Asp Thr Tyr Ser Ser Asn Val
Ile Ala Thr Ile Ala Cys Pro 645 650 655Asn Pro Met Cys Gly Arg Val
Met Glu Val Ser Ser Val His Tyr Lys 660 665 670Cys Cys His Arg Asp
Glu Pro Asn Asn Phe Gly Val 675 6809238PRTAequorea victoria 9Met
Ser Lys Gly Glu Glu Leu Phe Thr Gly Val Val Pro Ile Leu Val1 5 10
15Glu Leu Asp Gly Asp Val Asn Gly His Lys Phe Ser Val Ser Gly Glu
20 25 30Gly Glu Gly Asp Ala Thr Tyr Gly Lys Leu Thr Leu Lys Phe Ile
Cys 35 40 45Thr Thr Gly Lys Leu Pro Val Pro Trp Pro Thr Leu Val Thr
Thr Leu 50 55 60Thr Tyr Gly Val Gln Cys Phe Ser Arg Tyr Pro Asp His
Met Lys Gln65 70 75 80His Asp Phe Phe Lys Ser Ala Met Pro Glu Gly
Tyr Val Gln Glu Arg 85 90 95Thr Ile Phe Phe Lys Asp Asp Gly Asn Tyr
Lys Thr Arg Ala Glu Val 100 105 110Lys Phe Glu Gly Asp Thr Leu Val
Asn Arg Ile Glu Leu Lys Gly Ile 115 120 125Asp Phe Lys Glu Asp Gly
Asn Ile Leu Gly His Lys Leu Glu Tyr Asn 130 135 140Tyr Asn Ser His
Asn Val Tyr Ile Met Ala Asp Lys Gln Lys Asn Gly145 150 155 160Ile
Lys Val Asn Phe Lys Ile Arg His Asn Ile Glu Asp Gly Ser Val 165 170
175Gln Leu Ala Asp His Tyr Gln Gln Asn Thr Pro Ile Gly Asp Gly Pro
180 185 190Val Leu Leu Pro Asp Asn His Tyr Leu Ser Thr Gln Ser Ala
Leu Ser 195 200 205Lys Asp Pro Asn Glu Lys Arg Asp His Met Val Leu
Leu Glu Phe Val 210 215 220Thr Ala Ala Gly Ile Thr His Gly Met Asp
Glu Leu Tyr Lys225 230 23510239PRTAequorea victoria 10Met Val Ser
Lys Gly Glu Glu Leu Phe Thr Gly Val Val Pro Ile Leu1 5 10 15Val Glu
Leu Asp Gly Asp Val Asn Gly His Lys Phe Ser Val Ser Gly 20 25 30Glu
Gly Glu Gly Asp Ala Thr Tyr Gly Lys Leu Thr Leu Lys Leu Ile 35 40
45Cys Thr Thr Gly Lys Leu Pro Val Pro Trp Pro Thr Leu Val Thr Thr
50 55 60Phe Gly Tyr Gly Leu Gln Cys Phe Ala Arg Tyr Pro Asp His Met
Lys65 70 75 80Gln His Asp Phe Phe Lys Ser Ala Met Pro Glu Gly Tyr
Val Gln Glu 85 90 95Arg Thr Ile Phe Phe Lys Asp Asp Gly Asn Tyr Lys
Thr Arg Ala Glu 100 105 110Val Lys Phe Glu Gly Asp Thr Leu Val Asn
Arg Ile Glu Leu Lys Gly 115 120 125Ile Asp Phe Lys Glu Asp Gly Asn
Ile Leu Gly His Lys Leu Glu Tyr 130 135 140Asn Tyr Asn Ser His Asn
Val Tyr Ile Thr Ala Asp Lys Gln Lys Asn145 150 155 160Gly Ile Lys
Ala Asn Phe Lys Ile Arg His Asn Ile Glu Asp Gly Gly 165 170 175Val
Gln Leu Ala Asp His Tyr Gln Gln Asn Thr Pro Ile Gly Asp Gly 180 185
190Pro Val Leu Leu Pro Asp Asn His Tyr Leu Ser Tyr Gln Ser Ala Leu
195 200 205Ser Lys Asp Pro Asn Glu Lys Arg Asp His Met Val Leu Leu
Glu Phe 210 215 220Val Thr Ala Ala Gly Ile Thr Leu Gly Met Asp Glu
Leu Tyr Lys225 230 2351134DNAArtificial sequenceoligonucleotide
11agaaccatgg gatcattgtc caatggaact aaac 341233DNAArtificial
sequenceoligonucleotide 12agactcgagt catatcttgc cattctgtgg agc
331332DNAArtificial sequenceoligonucleotide 13agactcgagc atatcttgcc
attctgtgga gc 321434DNAArtificial sequenceoligonucleotide
14agaaccatgg gatccactgc attgtcctat aatg 341530DNAArtificial
sequenceoligonucleotide 15agactcgagt caaatgcagc aactatctgg
301627DNAArtificial sequenceoligonucleotide 16agactcgaga tgcagcaact
atctgga 271732DNAArtificial sequenceoligonucleotide 17agaaccatgg
gatccctttc caacttagga ag 321830DNAArtificial
sequenceoligonucleotide 18agactcgagt caaacaccaa gattgtttgg
301929DNAArtificial sequenceoligonucleotide 19agactcgaga caccaagatt
gtttggttc 292028DNAArtificial sequenceoligonucleotide 20agactcgaga
atgagtgaag gccccgtc 282130DNAArtificial sequenceoligonucleotide
21agactcgagc taattatcct tcgtatcttc 302230DNAArtificial
sequenceoligonucleotide 22agactcgaga atggttcatt taggtccaaa
302328DNAArtificial sequenceoligonucleotide 23agactcgagt taagcaccga
tgatacca 282430DNAArtificial sequenceoligonucleotide 24agactcgaga
atgtccaata actcattcac 302531DNAArtificial sequenceoligonucleotide
25agactcgaga tcacatccat tccttgaatt g 312630DNAArtificial
sequenceoligonucleotide 26agactcgaga gcatcaatga caaacgaaac
302731DNAArtificial sequenceoligonucleotide 27agactcgagc tattttactt
cccttacttg g 312826DNAArtificial sequenceoligonucleotide
28agaccatgga cctgcgtatt tctcag 262940DNAArtificial
sequenceoligonucleotide 29agaccatggt acgaccttcg atcctgcata
tagaaatgcc 403040DNAArtificial sequenceoligonucleotide 30agactcgaga
atcgaaggtc gtgacctgcg tatttctcag 403128DNAArtificial
sequenceoligonucleotide 31agatctagat cacctgcata tagaaatg
283227DNAArtificial sequenceoligonucleotide 32agactcgaga atgaccgacg
ctgcttc 273328DNAArtificial sequenceoligonucleotide 33agactcgagt
catgtttcct ccacaatc 283438DNAArtificial sequenceoligonucleotide
34agaccatggg actcgagaat gtcccctata ctaggtta 383530DNAArtificial
sequenceoligonucleotide 35agagtcgact taacgacctt cgatcagatc
303627DNAArtificial sequenceoligonucleotide 36agaccatggc ggataacaaa
ttcaaca 273728DNAArtificial sequenceoligonucleotide 37agaccatggc
ttttggtgct tgagcatc 283828DNAArtificial sequenceoligonucleotide
38agactcgaga gcggataaca aattcaac 283930DNAArtificial
sequenceoligonucleotide 39agactcgagt cattttggtg cttgagcatc
304033DNAArtificial sequenceoligonucleotide 40agaccatggg atccctttcc
aacttaggaa gtg 334128DNAArtificial sequenceoligonucleotide
41agaccatggc ctgacaagaa atcagctt 284227DNAArtificial
sequenceoligonucleotide 42agaccatggg aatgataacc acccctc
274333DNAArtificial sequenceoligonucleotide 43agactcgagg tcatatcttg
ccattctgtg gag 334430DNAArtificial sequenceoligonucleotide
44agaccatggg atcattgtcc aatggaacta 304532DNAArtificial
sequenceoligonucleotide 45agactcgagt gatagtattc tttgaatgca at
324630DNAArtificial sequenceoligonucleotide 46agactcgagt gatactaagc
tttcagagat 304736DNAArtificial sequenceoligonucleotide 47aaactcgagt
caaatgcagc aactatctgg atcatc 36
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