U.S. patent application number 15/208851 was filed with the patent office on 2017-06-01 for myostatin inhibition for enhancing muscle and/or improving muscle function.
The applicant listed for this patent is NATIONWIDE CHILDREN'S HOSPITAL. Invention is credited to Brian K. Kaspar, Jerry R. Mendell.
Application Number | 20170151348 15/208851 |
Document ID | / |
Family ID | 39468723 |
Filed Date | 2017-06-01 |
United States Patent
Application |
20170151348 |
Kind Code |
A1 |
Kaspar; Brian K. ; et
al. |
June 1, 2017 |
MYOSTATIN INHIBITION FOR ENHANCING MUSCLE AND/OR IMPROVING MUSCLE
FUNCTION
Abstract
The present invention relates to methods for inhibitiing
myostatin, a regulator of muscle mass, for muscle enhancement
(including inducing hypertrophy and/or hyperplasia) as well as
improving muscle function (including decreasing atrophy and/or
increasing endurance, force and/or strength). Some of the methods
involve delivering genes to cells using gene delivery or other
delivery techniques known in the art in order to inhibit myostatin.
Examples of genes to be delivered are genes encoding proteins such
as Follistatin, Follistatin-related gene-1 (FLRG-1), growth
differentiation factor associated protein-1 (GASP-1) and myostatin
precursor propeptide. The genes can be delivered using, for
example, a recombinant Adeno-associated virus (rAAV), lentivirus or
equine-associated virus capable of infecting the cells. Following
introduction, the genes are expressed in the cell body of the
infected cell and the encoded proteins are secreted systemically.
In other methods of the invention, expression of proteins such as
activin IIb and myostatin is inhibited by oligonucleotide
techniques to effect muscle enhancement. All the methods have
applications in the treatment of musculoskeletal and
neurodegenerative disorders among others, as well as enhancing
muscle in livestock.
Inventors: |
Kaspar; Brian K.;
(Westerville, OH) ; Mendell; Jerry R.; (Columbus,
OH) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
NATIONWIDE CHILDREN'S HOSPITAL |
Columbus |
OH |
US |
|
|
Family ID: |
39468723 |
Appl. No.: |
15/208851 |
Filed: |
July 13, 2016 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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14551834 |
Nov 24, 2014 |
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15208851 |
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12516995 |
Mar 22, 2010 |
8895309 |
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PCT/US07/85960 |
Nov 29, 2007 |
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14551834 |
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60861602 |
Nov 29, 2006 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
C12N 7/00 20130101; A61K
9/0019 20130101; C12N 2750/14142 20130101; C12N 2750/14143
20130101; C07K 14/4703 20130101; C12N 2799/025 20130101; C12N 15/86
20130101; A61K 35/761 20130101; A61P 21/00 20180101; A61K 38/18
20130101; A61K 48/00 20130101; A61K 38/00 20130101 |
International
Class: |
A61K 48/00 20060101
A61K048/00; C12N 15/86 20060101 C12N015/86; A61K 9/00 20060101
A61K009/00 |
Goverment Interests
[0001] This invention was developed with partial government support
under grant number NS052530 from the National Institutes of Health
and Project A.L.S. The government may have certain rights in the
invention.
Claims
1. A method of delivering a myostatin inhibitor to an animal in
need thereof, comprising the step of intravenously administering to
the animal a composition comprising one or more infectious
encapsidated rAAVs, each comprising a recombinant AAV genome
comprising at least one AAV inverted terminal repeat flanking a
polynucleotide encoding a myostatin inhibitor, wherein the genome
lacks AAV rep and cap DNA
2. The method of claim 1 wherein the polynucleotide encodes a
myostatin inhibitor protein and is operatively linked to
transcriptional control DNA.
3. The method of claim 1 wherein the polynucleotide encodes a
myostatin inhibitor RNA.
4-12. (canceled)
13. The method of claim 1 wherein the musculoskeletal disease is a
muscular dystrophy or inclusion body myositis (IBM).
14. The method of claim 13 wherein the muscular dystrophy is
Duchenne muscular dystrophy.
15-17. (canceled)
18. The method of claim 1 wherein the neurodegenerative disease is
Amyotrophic Lateral Sclerosis, multiple sclerosis or spinal
muscular atrophy.
19-21. (canceled)
22. The method of claim 2 wherein the myostatin inhibitor protein
is follistatin, follistatin-related gene (FLRG), myostatin
precursor propeptide or growth differentiation factor associated
protein-1 (GASP-1).
23-25. (canceled)
26-29. (canceled)
30. The method of claim 22 wherein the myostatin inhibitor protein
binds to the myostatin receptor activin IIb.
31-34. (canceled)
35. A packaging cell producing an infectious encapsidated rAAV
comprising a recombinant AAV genome comprising at least one AAV
inverted terminal repeat flanking a polynucleotide encoding a
myostatin inhibitor , wherein the genome lacks AAV rep and cap
DNA.
36. A composition comprising one or more infectious encapsidated
rAAVs, each comprising a recombinant AAV genome comprising at least
one AAV inverted terminal repeat flanking a polynucleotide encoding
a myostatin inhibitor , wherein the genome lacks AAV rep and cap
DNA.
37. The composition of claim 36 wherein the polynucleotide encodes
a myostatin inhibitor protein and is operatively linked to
transcriptional control DNA.
38. The composition of claim 36 wherein the myostatin inhibitor
protein is follistatin, follistatin-related gene (FLRG), myostatin
precursor propeptide or growth differentiation factor associated
protein-1 (GASP-1).
39-42. (canceled)
43. The composition of claim 38 wherein the myostatin inhibitor
protein binds to the myostatin receptor activin IIb.
44. The composition of claim 36 wherein the polynucleotide encodes
a myostatin inhibitor RNA.
45-46. (canceled)
Description
FIELD OF THE INVENTION
[0002] The present invention relates to methods for inhibiting
myostatin, a regulator of muscle mass, for enhancing muscle
(including inducing hypertrophy and/or hyperplasia) as well as
improving muscle function (including decreasing atrophy and/or
increasing endurance, force and/or strength). Some of the methods
involve delivering genes to cells using gene delivery or other
delivery techniques known in the art in order to inhibit myostatin.
Examples of genes to be delivered are genes encoding proteins such
as Follistatin, Follistatin-related gene-1 (FLRG-1), growth
differentiation factor associated protein-1 (GASP-1) and myostatin
precursor propeptide. The genes can be delivered using, for
example, a recombinant Adeno-associated virus (rAAV), lentivirus or
equine-associated virus capable of infecting the cells. Following
introduction, the genes are expressed in the cell body of the
infected cell and the encoded proteins are secreted systemically.
In other methods of the invention, expression of proteins such as
activin IIb and myostatin is inhibited by oligonucleotide
techniques to effect muscle enhancement and/or improve muscle
function. All the methods have applications in the treatment of
musculoskeletal and neurodegenerative disorders among others, as
well as enhancing muscle in livestock.
BACKGROUND
[0003] Molecular advances have provided greater understanding of
skeletal muscle diseases, such as muscular dystrophy (MD),
beginning with the discovery of the dystrophin gene and its gene
product. There are nine types of MD, each a genetic degenerative
disease primarily affecting voluntary muscles. Duchenne muscular
dystrophy (DMD) affects 1 in 3500 live male births. The progressive
muscle weakness and degeneration usually lead to loss of ambulation
and wheelchair dependency in the early teens. Death occurs anytime
after age 18 due to respiratory infection usually complicated by
cardiac failure. The disease is caused by mutations in the
dystrophin gene, which encodes a large (427 kDa) cyto skeletal
protein in both skeletal and cardiac muscle. The dystrophin gene is
the largest gene identified to date. It shows one of the highest
sporadic mutation rates, with 1 of every 10,000 germ cells showing
de novo mutations. Thus, the high incidence ( 1/3500), de novo
mutations, early morbidity and fatality, and the lack of effective
treatment require urgency in the search for novel therapeutics.
Since DMD was described more than 140 years ago, the life-span of
the DMD patient has only been marginally prolonged and the quality
of life may not have changed significantly improved despite
tremendous advances in medicine. Few treatments have been added to
the current repertoire. In the muscular dystrophies, only
corticosteroids have altered the natural history of disease and
indeed the mechanism of action of corticosteroids in DMD remains
unknown. In fact, the known myopathic effects of steroids might
predict a deleterious effect but instead there is a paradoxical
response resulting in an increase in muscle mass contrasting with
the effects in normal muscle. Unfortunately the benefit of steroids
comes at a high cost in terms of side effects (bone loss,
cataracts, delayed puberty, weight gain and hypertension) providing
compelling reasons to find other approaches.
[0004] Amyotrophic Lateral Sclerosis (ALS) is another disease that
results in loss of muscle and/or muscle function. First
characterized by Charcot in 1869, it is a prevalent, adult-onset
neurodegenerative disease affecting nearly 5 out of 100,000
individuals. ALS occurs when specific nerve cells in the brain and
spinal cord that control voluntary movement gradually degenerate.
Within two to five years after clinical onset, the loss of these
motor neurons leads to progressive atrophy of skeletal muscles,
which results in loss of muscular function resulting in paralysis,
speech deficits, and death due to respiratory failure. The genetic
defects that cause or predispose ALS onset are unknown, although
missense mutations in the SOD-1 gene occurs in approximately 10% of
familial ALS cases, of which up to 20% have mutations in the gene
encoding Cu/Zn superoxide dismutase (SOD1), located on chromosome
21. SOD-1 normally functions in the regulation of oxidative stress
by conversion of free radical superoxide anions to hydrogen
peroxide and molecular oxygen. To date, over 90 mutations have been
identified spanning all exons of the SOD-1 gene. Some of these
mutations have been used to generate lines of transgenic mice
expressing mutant human SOD-1 to model the progressive motor neuron
disease and pathogenesis of ALS.
[0005] Another musculoskeletal disorder, inclusion body myositis
(IBM), was originally named by Yunis and Samaha in 1971 to describe
a patient with a chronic inflammatory myopathy who had intranuclear
and intracytoplasmic tubular filaments within muscle fibers on
electron microscopy. Many clinical and pathologic studies over more
than three decades have supported this condition as a disorder
distinct from other idiopathic inflammatory myopathies. Although
incidence and prevalence statistics need further refinement, it is
unequivocally the most common acquired muscle disease occurring
after age of 50, with an estimated prevalence at 4-9:1,000,000.
More men are affected than women by a ratio of greater than 2:1.
Typically IBM is a sporadic disorder with insidious onset, and
distinctive clinical and histopathological features (sIBM)
Inflammation is prominent, helping to distinguish it from the group
of inherited disorders (hIBM). These include autosomal recessive
and dominant conditions with pathologic features resembling sIBM
without inflammatory infiltration. Perhaps the best characterized
hIBM is associated with mutations of UDP-N-acetylglucosamine
2-epimerase/N-acetylmannosamine kinase (GNE) [6].
[0006] The clinical features of sIBM include an average time of
about 6 years from symptom onset to diagnosis. Difficulty with
ambulation and frequent falls can be attributed to weak knee
extensor muscles. Early involvement of the quadriceps and forearm
flexor muscle compartment is typical. This is accompanied by a
scooped-out appearance of the medial aspect of the forearms and
thin, atrophic quadriceps muscles. Quadriceps atrophy and weakness
is directly related to loss of safe ambulation. Frequent, sudden
falls occur in three-fourths of cases and are the prime reason for
wheelchair use. Only a minority are totally wheelchair dependent
(.about.15%). Mean time between symptom onset and wheelchair use
ranged from 13.+-.8 (6-32) years. Clinical dysphagia is common with
estimates reaching as high as 66%. Finger flexor weakness can be
detected early in the course of illness. About 40% of patients have
facial muscle weakness. In the only prospective study of decline of
muscle strength, the investigators documented a 4% decline in 6
months (0.66% per month) based on quantitative myometry using
maximal isometric contraction testing. A similar rate of decline
was also found in another study using manual muscle testing.
Natural history studies document a fairly consistent, slow rate of
decline in most patients with sIBM.
[0007] Therapy for sIBM has focused on the underlying inflammatory
response with either immunosuppressive or immunomodulating drugs.
Uncontrolled trials with corticosteroids, cyclophosphamide,
chlorambucil, azathioprine and cyclosporin, and methotrexate fail
to show convincing evidence of benefit. An initial pilot study of
IVIG in IBM showed encouraging results but a subsequent randomized
controlled trial with IVIG was negative. A prospective,
double-blind, placebo-controlled, 6 month trial of weekly IM
injections of 30 .mu.g of .beta.-interferon-1a showed no benefit. A
recently published open-label trial using etanercept showed
increased hand grip strength without any other functional benefits.
Considering the complexity of pathogenic factors, it may be
sometime before an effective treatment can target both autoimmune
and myodegenerative factors. Attention has shifted to growth
modulatory approaches. In a 3 month, randomized,
placebo-controlled, crossover study of oxandrolone, a synthetic
anabolic steroid, a borderline significant improvement in overall
strength was reported, as measured by quantitative myometry. The
study was limited by small sample size and short duration of
treatment. Exercise is another means of growth modulation and this
has been tried in inflammatory muscle diseases. An increase in
isometric torque and an improvement in functional activities was
reported in five patients with sIBM following a 12-week isotonic
training program for the knee extensors and flexors and the elbow
and wrist flexors. The small sample size disallows any conclusion
but exercise had no deleterious effects based on muscle biopsies
performed pre- and post-exercise.
[0008] Research has shown that skeletal muscle utilizes a
regulatory mechanism to control tissue mass. In a screen for novel
members of the transforming growth factor-.beta. (TGF-.beta.)
superfamily of growth and differentiation factors, myostatin
[previously called growth and differentiation factor-8 (GDF-8)] was
identified and has subsequently been shown to be a negative
regulator of muscle formation. Myostatin is expressed in the
myotome compartment of developing somites at E9.5 with expression
continuing throughout adulthood, predominantly in skeletal muscles
and adipose tissue. Myostatin is synthesized in a precursor form
that undergoes two proteolytic processing events to remove the
N-terminal signal sequence and the C-terminal fragment, which
possess receptor-binding activity. Following proteolytic
processing, the propeptide and the disulfide linked C-terminal
dimer remain bound noncovalently in a latent complex. Myostatin can
be activated by dissociation of the propeptide after proteolytic
cleavage by a metalloproteinase of the bone morphogenic
(BMP)/tolloid family. The dissociated C-terminal fragment is thus
the biologically active species. For a review of the biosynthesis
and signaling pathway of myostatin, see Lee, Ann Rev Cell Dev Biol,
20: 61-86 (2004).
[0009] Myostatin is conserved among species, especially in its
C-terminal fragment which is identical across human, rat, murine,
porcine, turkey and chicken species. Mutations within myostatin
have been shown to be linked to the double muscling phenotype in
cattle [Grobet et al., Nat Genet, 17: 71-74 (1997); Kambadur et
al., Genome Res, 7:910-915 (1997); and McPherron and Lee, Proc Natl
Acad Sci USA, 94:12457-12461 (1997)] and gross muscle hypertrophy
in human subjects [Schuelke et al., N Eng J Med, 350: 2682-2688
(2004)]. Forced muscle atrophy has even been achieved with
recombinant myostatin administration or over-expression of
myostatin [Zimmers et al., Science, 296(5572): 1486-1488 (2002)].
Histology of muscles from myostatin null mice shows increased
muscle mass resulting from hyperplasia and hypertrophy of the
muscle with less fat and connective tissues.
[0010] The hypothesis that it may be beneficial to block, remove,
or reduce myostatin to promote regeneration and reduce fibrosis in
MD has been explored in animal studies. Wagner et al., Ann Neurol,
52: 832-836 (2002) describes data obtained from crossing myostatin
null mutant mice with mdx mice (which are models for dystrophin
deficiency) showing that mdx mice lacking myostatin were stronger
and more muscular than their mdx counterparts. In addition,
Bogdanovich et al., Nature, 420: 418-421 (2002) report that when a
neutralizing antibody to myostatin was administered to 4 week old
mdx mice by intraperitoneal injection, an increase in body weight,
muscle mass, muscle size and absolute muscle strength along with a
significant decrease in muscle degeneration and concentrations of
serum creatine kinase was observed. Similarly, Whittemore et al.,
Biochem Biophys Res Commun, 300: 965-971 (2003) describes that
myostatin neutralizing antibodies increase muscle mass in adult
mice. Tobin and Celeste, Curr Opin Pharma, 5: 328-332 (2005)
reviews the myostatin pathway as well as studies testing the
effects of reducing myostatin expression/activity.
[0011] Another review article, Wagner, Curr Opin Rheumatol, 17:
720-724 (2005), lists various therapeutic approaches of inhibiting
myostatin that have been considered for treating human disease. For
example, Wyeth has developed a humanized, anti-myostatin antibody
called MYO-029 for clinical trials for treatment of muscular
dystrophy in adult patients. The review article states the antibody
or similar agent will hopefully be tested in other indications such
as inflammatory myopathies, cachexia and sarcopenia. The author
also notes that a number of endogenous inhibitors of myostatin,
including the myostatin propeptide, follistatin, FLRG and GASP-1
could be modified for use as therapeutic agents. The review refers
to two articles describing the effects of modified propeptide on
muscle in mice, Wolfman et al., Proc Natl Acad Sci US, 100:
15842-15846 (2003) and Bogdanovich et al., FASEB J, 19: 543-549
(2004).
[0012] The Wagner review article states that there is significant
data that follistatin is an in vivo inhibitor of myostatin and
refers to the results of studies described in Lee and McPherron,
Proc Natl Acad Sci USA, 98(16): 9306-9311 (2001) and Amthor et al.,
Developmental Biol., 270: 19-30 (2004) to support that statement.
Follistatin is a secreted protein that inhibits the activity of
TGF-.beta. family members such as GDF-11/BMP-11. Follistatin-344 is
a follistatin precursor that undergoes peptide cleavage to form the
circulating Follistatin-315 isoform which includes a C-terminal
acidic region. It circulates with myostatin propeptide in a complex
that includes two other proteins, follistatin related gene (FLRG)
and GDF associated serum protein (GASP-1). Follistatin-317 is
another follistatin precursor that undergoes peptide cleavage to
form the membrane-bound Follistatin-288 isoform. The DNA and amino
acid sequences of the follistatin-344 precursor are respectively
set out in SEQ ID NOs: 3 and 4. The Follistatin-288 isoform, which
lacks a C-terminal acidic region, exhibits strong affinity for
heparin-sulfate-proteoglycans, is a potent suppressor of pituitary
follicle stimulating hormone, is found in the follicular fluid of
the ovary, and demonstrates high affinity for the granulose cells
of the ovary. The testis also produce Follistatin-288. The DNA and
amino acid sequences of the follistatin-317 precursor are
respectively set out in SEQ ID NOs: 5 and 6. Lack of follistatin
results in reduced muscle mass at birth.
[0013] In the experiments described in the Lee and McPherron
article, follistatin was over-expressed in transgenic mice. The
mice showed increased muscling resulting from a combination of
hyperplasia (increased muscle fiber number) and hypertrophy
(increased muscle fiber diameter). The article proposes that
follistatin binds the C-terminal dimer of myostatin and, in turn,
inhibits the ability of myostatin to bind to activin type II
receptors. Transgenic mice expressing high levels of myostatin
propepetide or a dominant-negative form of activin type II receptor
(Act RIIB) were also shown to exhibit increased muscle mass in the
article.
[0014] The Amthor et al. article is stated to report that
follistatin directly binds myostatin with high affinity, is
co-expressed with myostatin in somites and prevents
myostatin-mediated inhibition of limb muscle development in chick
embryos. Indicating that the inhibitory effects of follistatin are
not specific to myostatin evening in regard to muscle growth, the
Wagner review article alternatively indicates that FLRG and GASP-1,
which bind to and inhibit circulating myostatin, may prove to be
specific inhibitors of myostatin for therapeutic use. FLRG is a
protein that exhibits homology to a 10-cysteine repeat in
follistatin. Hill et al., J Biol Chem, 277(43): 40735-40741 reports
that FLRG binds circulating myostatin in vivo.
[0015] Yet another review article addressing the regulation of
muscle mass by myostatin and clinical implications is Lee, Annu Rev
Cell Dev Biol., 20: 61-86 (2404).
[0016] Adeno-associated virus (AAV) is a replication-deficient
parvovirus, the single-stranded DNA genome of which is about 4.7 kb
in length including 145 nucleotide inverted terminal repeat (ITRs).
The nucleotide sequence of the AAV serotype 2 (AAV2) genome is
presented in Srivastava et al., J Virol, 45: 555-564 (1983) as
corrected by Ruffing et al., J Gen Virol, 75: 3385-3392 (1994).
Cis-acting sequences directing viral DNA replication (rep),
encapsidation/packaging and host cell chromosome integration are
contained within the ITRs. Three AAV promoters (named p5, p19, and
p40 for their relative map locations) drive the expression of the
two AAV internal open reading frames encoding rep and cap genes.
The two rep promoters (p5 and p19), coupled with the differential
splicing of the single AAV intron (at nucleotides 2107 and 2227),
result in the production of four rep proteins (rep 78, rep 68, rep
52, and rep 40) from the rep gene. Rep proteins possess multiple
enzymatic properties that are ultimately responsible for
replicating the viral genome. The cap gene is expressed from the
p40 promoter and it encodes the three capsid proteins VP1, VP2, and
VP3. Alternative splicing and non-consensus translational start
sites are responsible for the production of the three related
capsid proteins. A single consensus polyadenylation site is located
at map position 95 of the AAV genome. The life cycle and genetics
of AAV are reviewed in Muzyczka, Current Topics in Microbiology and
Immunology, 158: 97-129 (1992).
[0017] AAV possesses unique features that make it attractive as a
vector for delivering foreign DNA to cells, for example, in gene
therapy. AAV infection of cells in culture is noncytopathic, and
natural infection of humans and other animals is silent and
asymptomatic. Moreover, AAV infects many mammalian cells allowing
the possibility of targeting many different tissues in vivo.
Moreover, AAV transduces slowly dividing and non-dividing cells,
and can persist essentially for the lifetime of those cells as a
transcriptionally active nuclear episome (extrachromosomal
element). The AAV proviral genome is infectious as cloned DNA in
plasmids which makes construction of recombinant genomes feasible.
Furthermore, because the signals directing AAV replication, genome
encapsidation and integration are contained within the ITRs of the
AAV genome, some or all of the internal approximately 4.3 kb of the
genome (encoding replication and structural capsid proteins,
rep-cap) may be replaced with foreign DNA such as a gene cassette
containing a promoter, a DNA of interest and a polyadenylation
signal. The rep and cap proteins may be provided in trans. Another
significant feature of AAV is that it is an extremely stable and
hearty virus. It easily withstands the conditions used to
inactivate adenovirus (56.degree. to 65.degree. C. for several
hours), making cold preservation of AAV less critical. AAV may even
be lyophilized. Finally, AAV-infected cells are not resistant to
superinfection.
[0018] Multiple studies have demonstrated long-term (>1.5 years)
recombinant AAV-mediated protein expression in muscle. See, Clark
et al., Hum Gene Ther, 8: 659-669 (1997); Kessler et al., Proc Nat.
Acad Sc. USA, 93: 14082-14087 (1996); and Xiao et al., J Virol, 70:
8098-8108 (1996). See also, Chao et al., Mol Ther, 2:619-623 (2000)
and Chao et al., Mol Ther, 4:217-222 (2001). Moreover, because
muscle is highly vascularized, recombinant AAV transduction has
resulted in the appearance of transgene products in the systemic
circulation following intramuscular injection as described in
Herzog et al., Proc Natl Acad Sci USA, 94: 5804-5809 (1997) and
Murphy et al., Proc Natl Acad Sci USA, 94: 13921-13926 (1997).
Moreover, Lewis et al., J Virol, 76: 8769-8775 (2002) demonstrated
that skeletal myofibers possess the necessary cellular factors for
correct antibody glycosylation, folding, and secretion, indicating
that muscle is capable of stable expression of secreted protein
therapeutics.
BRIEF SUMMARY OF THE INVENTON
[0019] The present invention provides methods and materials useful
for muscle enhancement and/or improving muscle function. The
methods of the invention involve delivering inhibitors of
myostatin, a regulator of muscle mass, to muscle cells. Use of the
methods and materials is indicated, for example, for treating
musculoskeletal diseases/disorders and neurodegenerative
diseases/disorders in which muscle is adversely affected as well as
treating sarcopenia, cachexia, obesity, Type II diabetes, Pompe
disease and lysosomal storage disorders. The methods and materials
are also useful, for example, for muscle enhancement in livestock
including, but not limited to, cattle, pigs and fowl.
[0020] The terms "inhibitor of myostatin" and "myostatin inhibitor"
are intended to be interchangeable herein. The myostatin inhibitor
may be a protein or may be an oligonucleotide (RNA or DNA).The
terms "muscle enhancement" and "enhancing muscle" are also intended
to be interchangeable herein and include, but are not limited to,
inducement of hyperplasia (increased muscle fiber number),
inducement of hypertrophy (increased muscle fiber diameter) or
both. "Enhanced muscle performance" includes, but is not limited
to, one or more of decreased atrophy, increased muscle endurance,
increased muscle force and increased muscle strength.
[0021] Myostatin inhibitor proteins according to the invention may
be peptides or polypeptides. The proteins may inhibit myostatin by
binding myostatin [McPherron et al., Nature, 387(6628): 83-90
(1997)]or by binding the myostatin receptor activin IIb [McPherron
et al., Nat. Genet., 22(3): 260-264 (1999)]. Examples of proteins
that inhibit myostatin by binding to myostatin are myostatin
propeptide, follistatin [Shimasaki et al., U.S. Pat. No.
5,041,538], other follistatin-like proteins (U.S. Pat. Nos.
5,942,420; 6,410,232; 6,537,966; and 6,953,662), FLRG (SEQ ID NO:
8, the corresponding nucleotide sequence is SEQ ID NO: 7) [Hill et
al., J. Biol. Chem., 277(43): 40735-40741 (2002)]and GASP-1(SEQ ID
NO: 10, corresponding nucleotide sequence is SEQ ID NO: 9) [Hill et
al., Mol Endocrinol, 17: 1144-1154 (2003)] . Proteins that are
myostatin inhibitors according to the invention may be protein
fragments or may be chimeric (i.e., fusion) proteins.
[0022] Myostatin inhibitor oligonucleotides of the invention may be
antisense oligonucleotides [Eckstein, Antisense Nucleic Acid Drug
Dev., 10: 117-121 (2000); Crooke, Methods Enzymol., 313: 3-45
(2000); Guvakova et al., J. Biol. Chem., 270: 2620-2627 (1995);
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797-803 (2004); Gleave and Monia, Nat. Rev. Cancer, 5: 468-479
(2005) and Patil, AAPS J. 7: E61-E77 (2005], triplex
oligonucleotides [Francois et al., Nucleic Acids Res., 16:
11431-11440 (1988) and Moser and Dervan, Science, 238: 645-650
(1987)], ribozymes/deoxyribozymes(DNAzymes) [Kruger et al.,
Tetrahymena. Cell, 31: 147-157 (1982); Uhlenbeck, Nature, 328:
596-600 (1987); Sigurdsson and Eckstein, Trends Biotechnol., 13
286-289 (1995); Kumar et al., Gene Ther., 12: 1486-1493 (2005);
Breaker and Joyce, Chem. Biol., 1: 223-229 (1994); Khachigian,
Curr. Pharm. Biotechnol., 5: 337-339 (2004); Khachigian, Biochem.
Pharmacol., 68: 1023-1025 (2004) and Trulzsch and Wood, J.
Neurochem., 88: 257-265 (2004)], small-interfering RNAs/RNAi [Fire
et al., Nature, 391: 806-811 (1998); Montgomery et al., Proc. Natl.
Acad. Sci. U.S.A., 95: 15502-15507 (1998); Cullen, Nat. Immunol.,
3: 597-599 (2002); Hannon, Nature, 418: 244-251 (2002); Bernstein
et al., Nature, 409: 363-366 (2001); Nykanen et al., Cell, 107:
309-321 (2001); Gilmore et al., J. Drug Target., 12: 315-340
(2004); Reynolds et al., Nat. Biotechnol., 22: 326-330 (2004);
Soutschek et al., Nature, 432173-178 (2004); Ralph et al., Nat.
Med., 11: 429-433 (2005); Xia et al., Nat. Med., 10816-820 (2004)
and Miller et al., Nucleic Acids Res., 32: 661-668 (2004)],
aptamers [Ellington and Szostak, Nature, 346: 818-822 (1990);
Doudna et al., Proc. Natl. Acad. Sci. U.S.A., 92: 2355-2359 (1995);
Tuerk and Gold, Science, 249: 505-510 (1990); White et al., Mol.
Ther., 4: 567-573 (2001); Rusconi et al., Nature, 419: 90-94
(2002); Nimjee et al., Mol. Ther., 14: 408-415 (2006); Gragoudas et
al., N. Engl. J. Med., 351: 3805-2816 (2004); Vinores, Curr. Opin.
Mol. Ther., 5673-679 (2003) and Kourlas and Schiller et al., Clin.
Ther., 28 36-44 (2006)] or decoy oligonucleotides [Morishita et
al., Proc. Natl. Acad. Sci. U.S.A., 92: 5855-5859 (1995); Alexander
et al., J. Am. Med. Assoc., 294: 2446-2454 (2005); Mann and Dzau,
J. Clin. Invest., 106: 1071-1075 (2000) and Nimjee et al., Annu.
Rev. Med., 56: 555-583 (2005). The myostatin inhibitor
oligonucleotides inhibit the expression of myostatin or expression
of its receptor activin IIb. The foregoing documents are hereby
incorporated by reference in their entirety herein, with particular
emphasis on those sections of the documents relating to methods of
designing, making and using oligonucleotides.
[0023] Some embodiments of the invention exploit the unique
properties of AAV to deliver polynucleotides encoding myostatin
inhibitors to muscle cells. Other embodiments of the invention
utilize other vectors (for example, other viral vectors such as
adenovirus, retrovirus, lentivirus, equine-associated virus,
alphavirus, pox viruses, herpes virus, polio virus, sindbis virus
and vaccinia viruses) to deliver polynucleotides encoding myostatin
inhibitors.
DETAILED DESCRIPTION OF THE INVENTION
[0024] In one aspect, the invention provides rAAV genomes. The rAAV
genomes comprise one or more AAV ITRs flanking a polynucleotide
encoding one or more myostatin inhibitors. If the polynucleotide
encodes one or more myostatin inhibitor proteins the polynucleotide
is operatively linked to transcriptional control DNA, specifically
promoter DNA and polyadenylation signal sequence DNA that are
functional in target cells to form a gene cassette. The gene
cassette may also include intron sequences to facilitate processing
of the RNA transcript when expressed in mammalian cells.
Alternatively, the polynucleotide in the rAAV genome be a myostatin
inhibitor RNA or may encode one or more myostatin inhibitor RNAs.
The myostatin inhibitor RNAs may be antisense RNAS, ribozymes,
small interfering RNAs (RNAi) or aptamers that inhibit expression
of myostatin or its receptor activin IIb. For example, an antisense
RNA complementary to the translation initiation site of myostatin
or activin IIb may be encoded by the rAAV genome. As another
example, an RNA that binds to the myostatin or activin IIb
double-stranded DNA may be encoded that prevents DNA unwinding and
transcription. As yet another example, commercial providers such as
Ambion Inc. (Austin, Tex.), Darmacon Inc. (Lafayette, Colo.),
InvivoGen (San Diego, Calif.), and Molecular Research Laboratories,
LLC (Herndon, Va.) generate custom siRNA molecules. In addition,
commercially kits are available to produce custom siRNA molecules,
such as SILENCER.TM. siRNA Construction Kit (Ambion Inc., Austin,
Tex.) or psiRNA System (InvivoGen, San Diego, Calif.).
[0025] The rAAV genomes of the invention lack AAV rep and cap DNA.
AAV DNA in the rAAV genomes may be from any AAV serotype for which
a recombinant virus can be derived including, but not limited to,
AAV serotypes AAV-1, AAV-2, AAV-3, AAV-4, AAV-5, AAV-6, AAV-7,
AAV-8, AAV-9, AAV-10 and AAV-11.The nucleotide sequences of the
genomes of the AAV serotypes are known in the art. For example, the
complete genome of AAV-1 is provided in GenBank Accession No.
NC_002077; the complete genome of AAV-2 is provided in GenBank
Accession No. NC_001401 and Srivastava et al., J. Virol., 45:
555-564 11983); the complete genome of AAV-3 is provided in GenBank
Accession No. NC_1829; the complete genome of AAV-4 is provided in
GenBank Accession No. NC_001829; the AAV-5 genome is provided in
GenBank Accession No. AF085716; the complete genome of AAV-6 is
provided in GenBank Accession No. NC_00 1862; at least portions of
AAV-7 and AAV-8 genomes are provided in GenBank Accession Nos.
AX753246 and AX753249, respectively; the AAV -9 genome is provided
in Gao et al., J. Virol., 78: 6381-6388 (2004); the AAV-10 genome
is provided in Mol. Ther., 13(1): 67-76 (2006); and the AAV-11
genome is provided in Virology, 330(2): 375-383 (2004).
[0026] In another aspect, the invention provides DNA plasmids
comprising rAAV genomes of the invention. The DNA plasmids are
transferred to cells permissible for infection with a helper virus
of AAV (e.g., adenovirus, E1-deleted adenovirus or herpesvirus) for
assembly of the rAAV genome into infectious viral particles.
Techniques to produce rAAV particles, in which an AAV genome to be
packaged, rep and cap genes, and helper virus functions are
provided to a cell are standard in the art. Production of rAAV
requires that the following components are present within a single
cell (denoted herein as a packaging cell): a rAAV genome, AAV rep
and cap genes separate from (i.e., not in) the rAAV genome, and
helper virus functions. The AAV rep and cap genes may be from any
AAV serotype for which recombinant virus can be derived and may be
from a different AAV serotype than the rAAV genome ITRs, including,
but not limited to, AAV serotypes AAV-1, AAV-2, AAV-3, AAV-4,
AAV-5, AAV-6, AAV-7, AAV-8, AAV-9, AAV-10 and AAV-11. Production of
pseudotyped rAAV is disclosed in, for example, WO 01/83692 which is
incorporated by reference herein in its entirety.
[0027] A method of generating a packaging cell is to create a cell
line that stably expresses all the necessary components for AAV
particle production. For example, a plasmid (or multiple plasmids)
comprising a rAAV genome lacking AAV rep and cap genes, AAV rep and
cap genes separate from the rAAV genome, and a selectable marker,
such as a neomycin resistance gene, are integrated into the genome
of a cell. AAV genomes have been introduced into bacterial plasmids
by procedures such as GC tailing (Samulski et al., 1982, Proc.
Natl. Acad. S6. USA, 79:2077-2081), addition of synthetic linkers
containing restriction endonuclease cleavage sites (Laughlin et
al., 1983, Gene, 23:65-73) or by direct, blunt-end ligation
(Senapathy & Carter, 1984, J. Biol. Chem., 259:4661-4666). The
packaging cell line is then infected with a helper virus such as
adenovirus. The advantages of this method are that the cells are
selectable and are suitable for large-scale production of rAAV.
Other examples of suitable methods employ adenovirus or baculovirus
rather than plasmids to introduce rAAV genomes and/or rep and cap
genes into packaging cells.
[0028] General principles of rAAV production are reviewed in, for
example, Carter, 1992, Current Opinions in Biotechnology, 1533-539;
and Muzyczka, 1992, Curr. Topics in Microbial. and Immunol.,
158:97-129). Various approaches are described in Ratschin et al.,
Mol. Cell. Biol. 4:2072 (1984); Hermonat et al., Proc. Natl. Acad.
Sci. USA, 81:6466 (1984); Tratschin et al., Mol. Cell. Biol. 5:3251
(1985); McLaughlin et al., J. Virol., 62:1963 (1988); and Lebkowski
et al., 1988 Mol. Cell. Biol., 7:349 (1988). Samulski et al. (1989,
J. Virol., 63:3822-3828); U.S. Pat. No. 5,173,414; WO 95/13365 and
corresponding U.S. Pat. No. 5,658.776 ; WO 95/13392; WO 96/17947;
PCT/U598/18600; WO 97/09441 (PCT/US96/14423); WO 97/08298
(PCT/US96/13872); WO 97/21825 (PCT/US96/20777); WO 97/06243
(PCT/FR96/01064); WO 99/11764; Perrin et al. (1995) Vaccine
13:1244-1250; Paul et al. (1993) Human Gene Therapy 4:609-615;
Clark et al. (1996) Gene Therapy 3:1124-1132; U.S. Pat. No.
5,786,211; U.S. Pat. No. 5,871,982; and U.S. Pat. No. 6,258,595.
The foregoing documents are hereby incorporated by reference in
their entirety herein, with particular emphasis on those sections
of the documents relating to rAAV production.
[0029] The invention thus provides packaging cells that produce
infectious rAAV. In one embodiment packaging cells may be stably
transformed cancer cells such as HeLa cells, 293 cells and PerC.6
cells (a cognate 293 line). In another embodiment, packaging cells
are cells that are not transformed cancer cells such as low passage
293 cells (human fetal kidney cells transformed with E1 of
adenovirus), MRC-5 cells (human fetal fibroblasts), WI-38 cells
(human fetal fibroblasts), Vero cells (monkey kidney cells) and
FRhL-2 cells (rhesus fetal lung cells).
[0030] In another aspect, the invention provides rAAV (i.e.,
infectious encapsidated rAAV particles) comprising a rAAV genome of
the invention. Embodiments include, but are not limited to, the
exemplified rAAV named "rAAV follistatin-344" and "rAAV MCK
follistatin-344." The rAAV follistatin-344 genome includes in
sequence an AAV2 ITR, the CMV promoter, an intron from the human
13-globin gene, the follistatin DNA set out in SEQ ID NO: 11, a
polyadenylation signal sequence from the human 13-globin gene and
another AAV2 ITR. The rAAV MCK follistatin-344 genome includes in
sequence an AAV2 ITR, a truncated human muscle creatine kinase
(MCK) promoter, a chimeric intron, the follistatin DNA set out in
SEQ ID No: 11, the SV40 late polyadenylation signal and another
AAV2 ITR. The chimeric intron is composed of the 5' donor site from
the first intron of the human .beta.-globin gene and the
branchpoint and 3' splice acceptor site from the intron that is
between the leader and the body of an immunoglobulin gene heavy
chain variable region. The sequences of the donor and acceptor
sites, along with the branchpoint site, have been changed to match
the consensus sequences for splicing. The SV40 polyadenylation
signal is used for efficient transcription termination. Both
genomes lack AAV rep and cap DNA, that is, there is no AAV rep or
cap DNA between the ITRs of the genome.
[0031] The rAAV may be purified by methods standard in the art such
as by column chromatography or cesium chloride gradients. Methods
for purifying rAAV vectors from helper virus are known in the art
and include methods disclosed in, for example, Clark et al., Hum.
Gene Ther., 10(6): 1031-1039 (1999); Schenpp and Clark, Methods
Mol. Med., 69 427-443 (2002); U.S. Pat. No. 6,566,118 and WO
98/09657.
[0032] In another embodiment, the invention contemplates
compositions comprising rAAV of the present invention. These
compositions may be used to enhance muscle and/or improve muscle
function. In one embodiment, compositions of the invention comprise
a rAAV encoding a myostatin inhibitor of interest. In other
embodiments, compositions of the present invention may include two
or more rAAV encoding different myostatin inhibitors of
interest.
[0033] Compositions of the invention comprise rAAV in a
pharmaceutically acceptable carrier. The compositions may also
comprise other ingredients such as diluents and adjuvants.
Acceptable carriers, diluents and adjuvants are nontoxic to
recipients and are preferably inert at the dosages and
concentrations employed, and include buffers such as phosphate,
citrate, or other organic acids; antioxidants such as ascorbic
acid; low molecular weight polypeptides; proteins, such as serum
albumin, gelatin, or immunoglobulins; hydrophilic polymers such as
polyvinylpyrrolidone; amino acids such as glycine, glutamine,
asparagine, arginine or lysine; monosaccharides, disaccharides, and
other carbohydrates including glucose, mannose, or dextrins;
chelating agents such as EDTA; sugar alcohols such as mannitol or
sorbitol; salt-formig counterions such as sodium; and/or nonionic
surfactants such as Tween, pluronics or polyethylene glycol
(PEG).
[0034] Titers of rAAV to be administered in methods of the
invention will vary depending, for example, on the particular rAAV,
the mode of administration, the treatment goal, the individual, and
the cell type(s) being targeted, and may be determined by methods
standard in the art. Titers of rAAV may range from about
1.times.10.sup.6, about 1.times.10.sup.7, about 1.times.10.sup.8,
about 1.times.10.sup.9, about 1.times.10.sup.10, about
1.times.10.sup.11, about 1.times.10.sup.12, about 1.times.10.sup.13
to about 1.times.10.sup.14 or more DNase resistant particles (DRP)
per ml. Dosages may also be expressed in units of viral genomes
(vg).
[0035] Methods of transducing a target cell with rAAV, in vivo or
in vitro, are contemplated by the invention. The in vivo methods
comprise the step of administering an effective dose, or effective
multiple doses, of a composition comprising a rAAV of the invention
to an animal (including a human being) in need thereof. If the dose
is administered prior to development of a disorder/disease, the
administration is prophylactic. If the dose is administered after
the development of a disorder/disease, the administration is
therapeutic. In embodiments of the invention, an effective dose is
a dose that alleviates (eliminates or reduces) at least one symptom
associated with the disorder/disease state being treated,that slows
or prevents progression to a disorder/disease state,that slows or
prevents progression of a disorder/disease state, that diminishes
the extent of disease, that results in remission (partial or total)
of disease, and/or that prolongs survival. Examples of disease
states contemplated for treatment with methods of the invention are
musculoskeletal diseases/disorders [for example, muscular
dystrophies or inclusion body myositis (IBM)], neurodegenerative
diseases/disorders in which muscle is adversely affected (for
example, Amyotrophic Lateral Sclerosis multiple sclerosis and
spinal muscular atrophy), sarcopenia, cachexia, obesity, Type II
diabetes, Pompe disease and lysosomal storage disorders.
[0036] Combination therapies are also contemplated by the
invention. Combination as used herein includes both simultaneous
treatment or sequential treatments. Combinations of methods of the
invention with standard medical treatments (e.g., corticosteroids
for muscular dystrophies) are specifically contemplated, as are
combinations with novel therapies. For example, for treatment of
Muscular Dystrophies, methods of the invention may be combined with
follistatin administration, followed by simultaneous or concomitant
treatment to correct the genetic disorder. Correcting a genetic
disorder may involve, for example, replacing sarcoglycans in
sarcoglycan deficiency, correcting or replacing dystrophin in
disorders such as Duchenne's Muscular Dystrophy, treating ALS
patients with IGF-1 or mutant SOD1 interference strategies). Given
that in disorder contemplated for treatment by the present
invention, significant amount of muscle is lost, the prevention or
rescue of muscle will give a substrate (preserved or regenerated
muscle) for subsequent gene correction. In this respect, it may be
conceivable to inhibit myostatin to enhance muscle, increase muscle
size, and then provide the secondary treatment. Such secondary
treatments for Muscular Dystrophy may be IGF-1, interfering RNA
approaches, exon-skipping, calpain inhibition, dystrophin
upregulation, and dystroglycan expression. Further, there may be
additions to myostatin inhibition approaches to enhance the muscle
boosting effects. For example, addition of IGF-1 or other trophic
factors or muscle precursor injections could be performed.
Myostatin inhibition in concert with muscle precursor cells
(satellite cells, stem cells) may allow more of these cells to be
incorporated into the tissue.
[0037] Administration of an effective dose of the compositions may
be by routes standard in the art including, but not limited to,
intramuscular, parenteral, intravenous, oral, buccal, nasal,
pulmonary, intracranial, intraosseous, intraocular, rectal, or
vaginal. Route(s) of administration and serotype(s) of AAV
components of rAAV (in particular, the AAV ITRs and capsid protein)
of the invention may be chosen and/or matched by those skilled in
the art taking into account the infection and/or disease state
being treated and the target cells/tissue(s) that are to express
the myostatin inhibitor protein(s).
[0038] In particular, actual administration of rAAV of the present
invention may be accomplished by using any physical method that
will transport the rAAV recombinant vector into the target tissue
of an animal. Administration according to the invention includes,
but is not limited to, injection into muscle, the bloodstream
and/or directly into the liver. Simply resuspending a rAAV in
phosphate buffered saline has been demonstrated to be sufficient to
provide a vehicle useful for muscle tissue expression, and there
are no known restrictions on the carriers or other components that
can be co-administered with the rAAV (although compositions that
degrade DNA should be avoided in the normal manner with rAAV).
Capsid proteins of a rAAV may be modified so that the rAAV is
targeted to a particular target tissue of interest such as muscle.
See, for example, WO 02/053703, the disclosure of which is
incorporated by reference herein. Pharmaceutical compositions can
be prepared as injectable formulations or as topical formulations
to be delivered to the muscles by transdermal transport. Numerous
formulations for both intramuscular injection and transdermal
transport have been previously developed and can be used in the
practice of the invention. The rAAV can be used with any
pharmaceutically acceptable carrier for ease of administration and
handling.
[0039] For purposes of intramuscular injection, solutions in an
adjuvant such as sesame or peanut oil or in aqueous propylene
glycol can be employed, as well as sterile aqueous solutions. Such
aqueous solutions can be buffered, if desired, and the liquid
diluent first rendered isotonic with saline or glucose. Solutions
of rAAV as a free acid (DNA contains acidic phosphate groups) or a
pharmacologically acceptable salt can be prepared in water suitably
mixed with a surfactant such as hydroxpropylcellulose. A dispersion
of rAAV can also be prepared in glycerol, liquid polyethylene
glycols and mixtures thereof and in oils. Under ordinary conditions
of storage and use, these preparations contain a preservative to
prevent the growth of microorganisms. In this connection, the
sterile aqueous media employed are all readily obtainable by
standard techniques well-known to those skilled in the art.
[0040] The pharmaceutical forms suitable for injectable use include
sterile aqueous solutions or dispersions and sterile powders for
the extemporaneous preparation of sterile injectable solutions or
dispersions. In all cases the form must be sterile and must be
fluid to the extent that easy syringability exists. It must be
stable under the conditions of manufacture and storage and must be
preserved against the contaminating actions of microorganisms such
as bacteria and fungi. The carrier can be a solvent or dispersion
medium containing, for example, water, ethanol, polyol (for
example, glycerol, propylene glycol, liquid polyethylene glycol and
the like), suitable mixtures thereof, and vegetable oils. The
proper fluidity can be maintained, for example, by the use of a
coating such as lecithin, by the maintenance of the required
particle size in the case of a dispersion and by the use of
surfactants. The prevention of the action of microorganisms can be
brought about by various antibacterial and antifungal agents, for
example, parabens, chlorobutanol, phenol, sorbic acid, thimerosal
and the like. In many cases it will be preferable to include
isotonic agents, for example, sugars or sodium chloride. Prolonged
absorption of the injectable compositions can be brought about by
use of agents delaying absorption, for example, aluminum
monostearate and gelatin.
[0041] Sterile injectable solutions are prepared by incorporating
rAAV in the required amount in the appropriate solvent with various
other ingredients enumerated above, as required, followed by filter
sterilization. Generally, dispersions are prepared by incorporating
the sterilized active ingredient into a sterile vehicle which
contains the basic dispersion medium and the required other
ingredients from those enumerated above. In the case of sterile
powders for the preparation of sterile injectable solutions, the
preferred methods of preparation are vacuum drying and the freeze
drying technique that yield a powder of the active ingredient plus
any additional desired ingredient from the previously
sterile-filtered solution thereof.
[0042] Transduction with rAAV may also be carried out in vitro. In
one embodiment, desired target muscle cells are removed from the
subject, transduced with rAAV and reintroduced into the subject.
Alternatively, syngeneic or xenogeneic muscle cells can be used
where those cells will not generate an inappropriate immune
response in the subject.
[0043] Suitable methods for the transduction and reintroduction of
transduced cells into a subject are known in the art. In one
embodiment, cells can be transduced in vitro by combining rAAV with
muscle cells, e.g., in appropriate media, and screening for those
cells harboring the DNA of interest using conventional techniques
such as Southern blots and/or PCR, or by using selectable markers.
Transduced cells can then be formulated into pharmaceutical
compositions, and the composition introduced into the subject by
various techniques, such as by intramuscular, intravenous,
subcutaneous and intraperitoneal injection, or by injection into
smooth and cardiac muscle, using e.g., a catheter.
[0044] Transduction of cells with rAAV of the invention results in
sustained expression of myostatin inhibitors. The present invention
thus provides methods of administering/delivering rAAV which
express myostatin inhibitors to an animal, preferably a human
being. These methods include transducing tissues (including, but
not limited to, tissues such as muscle, organs such as liver and
brain, and glands such as salivary glands) with one or more rAAV of
the present invention. Transduction may be carried out with gene
cassettes comprising tissue specific control elements. For example,
one embodiment of the invention provides methods of transducing
muscle cells and muscle tissues directed by muscle specific control
elements, including, but not limited to, those derived from the
actin and myosin gene families, such as from the myoD gene family
[See Weintraub et al., Science, 251: 761-766 (1990], the
myocyte-specific enhancer binding factor MEF-2 [Cserjesi and Olson,
Mol Cell Biol 11: 4854-4862 (1990], control elements derived from
the human skeletal actin gene [Muscat et al., Mol Cell Biol, 7:
4089-4099 (1987)], the cardiac actin gene, muscle creatine kinase
sequence elements [See Johnson et al., Mol Cell Biol, 9:3393-3399
(1989)] and the murine creatine kinase enhancer (mCK) element,
control elements derived from the skeletal fast-twitch troponin C
gene, the slow-twitch cardiac troponin C gene and the slow-twitch
troponin I gene: hypozia-inducible nuclear factors [Semenza et al.,
Proc Natl Acad Sci USA, 88: 5680-5684 (1990], steroid-inducible
elements and promoters including the glucocorticoid response
element (GRE) [See Mader and White, Proc. Natl. Acad. Sci. USA 90:
5603-5607 (1993)], and other control elements.
[0045] Muscle tissue is an attractive target for in vivo gene
delivery and gene therapy, because it is not a vital organ and is
easy to access. The invention contemplates sustained expression of
biologically active myostatin inhibitor proteins from transduced
myofibers.
[0046] By "muscle cell" or "muscle tissue" is meant a cell or group
of cells derived from muscle of any kind (for example, skeletal
muscle and smooth muscle, e.g. from the digestive tract, urinary
bladder, blood vessels or cardiac tissue). Such muscle cells may be
differentiated or undifferentiated, such as myoblasts, myocytes,
myotubes, cardiomyocytes and cardiomyoblasts. Since muscle tissue
is readily accessible to the circulatory system, a protein produced
and secreted by muscle cells and tissue in vivo will logically
enter the bloodstream for systemic delivery, thereby providing
sustained, therapeutic levels of protein secretion from muscle.
[0047] The term "transduction" is used to refer to the
administration/delivery of myostatin inhibitor DNA to a recipient
cell either in vivo or in vitro, via a replication-deficient rAAV
of the invention resulting in expression of a functional myostatin
inhibitor by the recipient cell.
[0048] Thus, the invention provides methods of administering an
effective dose (or doses, administered essentially simultaneously
or doses given at intervals) of rAAV that encode inhibitors of
myostatin to a patient in need thereof.
BRIEF DESCRIPTION OF THE DRAWING
[0049] FIG. 1 demonstrates that AAV Follistatin induces gross body
mass increase in mice.
[0050] FIG. 2 depicts the dose response of AAV-Follistatin on motor
function tests in mice.
[0051] FIG. 3 shows that AAV-Follistatin induces muscle mass
increase in mice.
[0052] FIG. 4 depicts Succinate Dehydrogenase (SDH) staining on
tibialis anterior and triceps muscles in mice.
[0053] FIGS. 5-7 respectively represent the dark, intermediate and
light tibialis anterior (TA) muscle fiber diameters that result
from various doses of follistatin administration.
[0054] FIGS. 8-10 respectively represent the dark, intermediate and
light tricep muscle fiber diameters that result from various doses
of follistatin administration.
[0055] FIG. 11 demonstrates that follistatin treatment attenuates
the levels of serum creatine kinase.
[0056] FIG. 12 depicts histological examination of diaphragms at
10.times. from mdx animals stained with Masson's Trichrome.
[0057] FIG. 13 depicts histological examination of diaphragms at
20.times. from mdx animals stained with Masson's Trichrome.
[0058] FIG. 14 depicts histological examination of diaphragms at
40.times. from mdx animals stained with Masson's Trichrome.
[0059] FIG. 15 shows that follistatin induces hypertrophy in
diaphragm muscle fibers.
[0060] FIG. 16 shows that follistatin-treated animals demonstrate
higher numbers of revertant fibers in gastrocnemius.
[0061] FIG. 17 depicts studies done to assess muscle function of
8-week old animals that were forced to exercise daily on a
treadmill for 12 weeks.
[0062] FIG. 18 demonstrates that myostatin inhibitor proteins can
increase muscle mass and strength in wild type C57BL/6 mice.
[0063] FIG. 19 demonstrates that a single injection of AAV1-FS can
increase grip strength in aged mdx mice.
[0064] FIG. 20 depicts levels of FS in circulating plasma following
AAV-CMV-FS administration to non-human primates.
[0065] FIG. 21 depicts an analysis of fiber size showing muscle
hypertrophy in MCK-FS injected quads compared to non-injected
quads.
EXAMPLES OF THE INVENTION
[0066] Examples 1 and 2 below respectively describe the effect of a
rAAV-delivered myostatin inhibitor in animal models of Limb-girdle
muscular dystrophy Type 2D and Amyotrophic Lateral Sclerosis.
Example 3 describes the effect of a rAAV-delivered myostatin
inhibitor in the mdx animal model of muscular dystrophy. Example 4
describes a clinical protocol for treatment of inclusion body
myositis with a rAAV-delivered myostatin inhibitor. Example 5
describes the effect of a rAAV-delivered myostatin inhibitor in
wild type C57B1/6 mice. Example 6 describes the effect of a
rAAV-delivered myostatin inhibitor in older mdx animals. Example 7
describes the effect of a rAAV-delivered myostatin inhibitor in
non-human primates.
Example 1
[0067] Limb-girdle muscular dystrophy Type 2D (LGMD2D) is a
debilitating disease of children and young adults. Caused by a
mutation in any one of at least fifteen different genes, some types
of LGMD2D are autosomal dominant and others are autosomal
recessive. LGMD2D progresses slowly, resulting in weakness and
wasting first of the muscles around the shoulders and hips (limb
girdles) and sometimes later the muscles involved in
cardiopulmonary function. To date, there is no proven treatment to
delay the disease progression. Alpha-sarcoglycan knock-out mice are
animal models for LGMD2D [Duclos et al., J. Cell Biol., 142(6):
1461-1471 (1993)]. Experiments examining the effect of delivering
follistatin using a rAAV are described below.
[0068] An AAV serotype 1 recombinant virus was constructed to
encode a human follistatin DNA under the control of the strong
human cytomegalovirus promoter. The rAAV was designated "rAAV
follistatin UCSD". The human follistatin DNA (SEQ ID NO: 1) was a
kind gift from Dr. Shumazaki (University of California-San Diego,
La Jolla, Calif.). The amino acid sequence encoded by the DNA is
set out in SEQ ID NO: 2. The DNA was subcloned into the EcoRI site
of Bluescript containing a novel 5' Sfi I site and 3' Pme I site.
The cDNA was then subcloned directionally into these sites of an
AAV2-ITR-containing vector under the control of the human
cytomegalovirus promoter [Kaspar et al., Mol Ther, 5: 50-56
(2002)]. Recombinant AAV-1 vectors were produced by triple
transfection using calcium phosphate in human embryonic kidney
carcinoma 293 cells (HEK-293). Briefly, a plasmid containing the
Rep from serotype 2 and capsid from serotype 1 [Rabinowitz et al.,
J. Virol., 76: 791-801 (2002)] along with a helper adenoviral
plasmid (Stratagene, Palo Alto, Calif.) was used. Transfected
HEK293 cells were harvested 48 hours after transfection and
resuspended in a small volume of 20 mM Tris (pH 8.0), 1 mM MgCl2
and 150 mM NaCl (T20MIN150). Cells were frozen and thawed four
times and incubated with Benzonase (35 u/ml) for 30 minutes at
37.degree. C. Cell debris were pelleted by centrifugation at 3,000
rpm at 40.degree. C. for 15 minutes in a Beckmann GS-6R centrifuge.
The cleared lysate was purified by a CsCl gradient purification
process followed by anion exchange chromatography (POROS HQ-50). A
contract manufacturing company (Virapur LLC, San Diego, Calif.) was
used for some virus preparations and titers confirmed. Titer was
determined by QPCR techniques and titers were 3.times.10.sup.12
DNase Resistant Particles (DRP)/ml.
[0069] To test myostatin inhibition in vivo, 4-8 week old male
alpha-Sarcoglycan deficient mice were injected with a total of
1.times.10.sup.10 DNase Resistant Particles of the rAAV follistatin
UCSD or AAV-GFP (green fluorescent protein; control). The animals
had been tested for baseline motor function at 3 weeks of age.
[0070] Gross body mass increases were seen in mice following
administration of AAV-follistatin. (FIG. 1).
[0071] Motor functional tests included the accelerating Rotarod
test and hindlimb and forelimb grip strength measurements (Columbus
Instruments, Columbus, Ohio) (FIG. 2). Measurements were performed
weekly (same day and time of each week). Each weekly session
consisted of three trials on the elevated accelerating rotarod
beginning at 4 rpm/min. The time each mouse remained on the rod was
registered automatically. Grip strength meter testing was performed
by allowing the animals to grasp a platform followed by pulling the
animal until it release the platform, the force measurement
recorded in four separate trials.
[0072] These motor function tests showed improvements in muscle
strength in AAV-follistatin treated mice.
[0073] At 120 days, gross muscle evaluation and analysis of muscle
weight, fiber number and cross-sectional area (CSA) on HE sections
were performed as well as a follistatin ELISA assay. See Example 2
for procedures.
[0074] Increased serum follistatin levels accompanied by a local
and remote increase in muscle mass were observed in
rAAV-follistatin UCSD treated animals (p<0.05) (FIG. 3). Muscle
hyperplasia was observed in comparison to controls. The number of
central nucleated fibers was increased in AAV-follistatin treated
animals indicating enhanced muscle regeneration. In addition,
succinate dehydrogenase (SDH) staining was done on tibialis
anterior (TA) muscle histological sections from control, treated,
and wild type mice. SDH is a marker for oxidative, mitochondrial
metabolism and classifies myofibers into oxidative or glycolytic
fibers. This data supports a therapeutic effect of AAV-follistatin
treatment in MD. This approach represents a clinically applicable
gene delivery method to enhance muscle mass and function in LGMD2D
with potential for treatment for other forms of MD.
Example 2
[0075] Amyotrophic Lateral Sclerosis (ALS), also known as Lou
Gehrig's disease in the United States, is an adult onset disease
that causes degeneration of motor neurons. The loss of motor
neurons results in stiffness, atrophy of muscles, severe weakness
of limb muscles, inability to walk, speak or swallow, and death two
to five years after failure of the muscles that control
respirations. Ten percent of ALS is familial and one fifth of these
familial cases are caused by mutations in superoxide dismustase 1
(SOD1). Transgenic mice and rats expressing a mutant human SOD1
transgene develop an ALS phenotype [Gurney et al., Science, 264:
1772-1775 (1994)]. Experiments examining effect of delivering
follistatin using a rAAV are described below.
[0076] To test the ability for follistatin to reverse the
myostatin-dependent inhibition on myoblast proliferation, C2C12
myoblasts were incubated with a growth inhibitory dose of myostatin
(3 .mu.g/ml) in the presence or absence of conditioned media from
293 cells infected with rAAV follistatin UCSD (described in Example
1) or conditioned media from cells infected with rAAV encoding Red
Fluorescent Protein (RFP). The virus was produced as described for
the AAV-follistatin in Example 1 except virus was collected 72
hours post-transfection and processed on cesium chloride gradients
as previously described (Kaspar et al., 2002) C2C12 myoblasts were
grown in DMEM (Invitrogen, Temecula, Calif.) containing 10% FBS
(Invitrogen, Temecula, Calif.). Cell proliferation assays were
conducted in a 96-well Nunc Microtiter plates and seeded at 1000
cells per well. After attachment, myostatin (R&D Systems) was
added at a concentration of 3 .mu.g/ml in the presence or absence
of conditioned media. Conditioned media was created by infecting a
well of 12 well dish with either 109 viral particles of AAV-Red
Fluorescent Protein (RFP) or AAV-Follistatin (FS) and collecting
the media 48 hours after infection. Three-days following myostatin
inhibition, myoblast proliferation was assayed by the MTT assay.
MTT proliferation assay was performed using a commercially
available kit (Pierce Technologies). Data was collected in
quadruplicate and read on a microplate reader set for absorbance at
570 nM. Results were presented as means and standard errors.
[0077] Myoblasts cultured in growth media steadily increased in
cell number compared to myostatin-treated cultures, in which a
significant decrease in proliferation was seen.
Follistatin-conditioned media reversed the inhibition of
proliferation by myostatin, whereas control RFP conditioned media
did not.
[0078] To directly assess whether increased muscle proliferation
affected disease course in a mouse model of inherited ALS caused by
mutation in SOD1, rAAV follistatin UCSD or AAV-GFP (green
fluorescent protein; control) (1.times.10.sup.10 viral genomes per
injection) were injected bilaterally via intramuscular delivery
into the hindlimb quadriceps and tibialis muscles of 16 mice each
at 40 days of age (equal distribution of male and female
animals).
[0079] Mice were observed daily for survival. Survival analysis was
performed by Kaplan-Meier analysis which generates a .chi.2 value
to test for significance. The Kaplan-Meier test was performed using
the log-rank test equivalent to the Mantel-Haenszel test. In
addition, two tailed p values were calculated. When comparing
survival curves, median survival times were calculated with a 95%
confidence interval. All other statistical tests not involved in
survival analysis were performed by multi-way analysis of variance
followed by a Bonferroni post hoc analysis of means differences
between groups (GraphPad Prizm Software, San Diego, Calif.).
Testing of motor function using a rotarod device (Columbus
Instruments, Columbus, Ohio) began at 35-40 days of age. Each
weekly session consisted of three trials on the elevated
accelerating rotarod beginning at 5 rpm/min. The time each mouse
remained on the rod was registered. Grip Strength measurements for
forelimb and hindlimbs were tested weekly using a grip strength
meter (Columbus Instruments, Columbus, Ohio). Each weekly session
consisted of 4 tests per animal per limb. To determine mortality in
a reliable and humane fashion, we used an artificial end point,
defined by the inability of mice to right themselves 30 seconds
after being placed on their sides. The moribund mice were scored as
"dead" and were euthanized, and tissues were collected.
[0080] Both sets of animals reached end stage disease at .about.126
days. Despite this, follistatin treated muscles showed gross
changes including widespread increased muscle mass in compared to
the GFP treated animals. Easily seen from visual inspection, wet
weights of multiple muscles (n=10-15 animals each), including the
tibialis anterior, gastrocnemius, medial quadriceps and triceps
muscles were significantly (p<0.05) after injection of
AAV-follistatin. Increased muscle mass was not limited to the
hindlimb muscles injected. Using a commercially available ELISA
assay (R & D Systems) specific for human follistatin,
circulating blood levels of follistatin were found to be
significantly elevated (>10 ng/ml) at 100 days of age of
AAV-follistatin treated animals, but not AAV-GFP animals,
indicating that follistatin was acting in a paracrine manner on all
skeletal muscles. Data was collected in triplicate for each animal
and presented as means with standard error.
[0081] To determine whether the muscle weight increase was due to
hyperplasia, hypertrophy and/or muscle sparing in the ALS animals,
skeletal muscle hypertrophy and myofiber number were investigated.
Muscles were embedded in Optimal Cutting Temperature Compound (OCT)
and snap frozen in liquid nitrogen cooled isopentane. Transverse 10
.mu.m sections were cut through the middle of the muscle and
sections stained with H & E and trichrome stains. The sections
(4 sections each animal) were photographed on a Zeiss Axiovert
microscope connected to a Zeiss micrometer on a Dell Workstation.
The total area of the muscle cross section was calculated and
individual myofibers were counted and diameters measured. Graphs of
total fiber numbers per section and a percentage of fiber diameters
were plotted (FIGS. 5-10).
[0082] This revealed that at end stage (126-127 days) approximately
2 fold more myofibers were present in the gastrocnemius compared to
GFP-treated animals (n=8 animals) (p<0.01). Follistatin treated
muscles were also slightly hypertrophic based on measurements of
myofiber diameters in the quadriceps and gastrocnemius muscles
compared to AAV-GFP treated animals. Moreover, serum creatine
kinase levels were decreased in AAV-follistatin treated animals
versus AAV-GFP treated animals (FIG. 11).
[0083] Increased muscle mass, increased myofiber number, and
hypertrophy of muscle fibers translated, as expected, into
increased strength in the follistatin-treated animals. By 75 days
of age, follistatin-treated animals showed a 40% increase in
hindlimb strength compared with GFP treated littermates, remaining
comparable to the non-transgenic animals at 75 days. Strength in
the forelimbs was also increased from 60-120 days of age or
end-stage. The increased strength did not afford these mice better
performance with other measures, including a rotarod test,
presumably reflecting that strength is only one measure of
performance in this particular test. Despite maintenance of muscle
strength and increased muscle mass even through end stage, no
statistically significant increase in survival (defined by
paralysis so severe that the animal was unable to right itself
within 30 seconds) was seen in the follistatin-treated mice versus
untreated or AAV GFP treated cohorts (AAV-GFP 126, AAV-Follistatin
130; p value 0.06, Chi Square 3.504).
[0084] Enhancement of muscle mass and prevention of muscle atrophy
by inhibition of myostatin with virally delivered follistatin
yielded the expected increase in muscle mass and delayed atrophy.
It is contemplated that this result will translate into therapeutic
benefit in human patients treated with a myostatin inhibitor of the
invention.
Example 3
[0085] Another AAV serotype 1 recombinant virus was constructed to
encode a human follistatin DNA under the control of the strong
human cytomegalovirus promoter. The rAAV was designated "rAAV
follistatin-344". The DNA and amino acid sequences of the
follistatin encoded are respectively set out in SEQ ID NOs: 11 and
12. The rAAV follistatin-344 was administered to mdx mice
(Bogdanovich et al., supra) which are an animal model of MD.
[0086] Eighteen three-week old mice were injected with
1.times.10.sup.10 drp/limb of the rAAV while fifteen three-week old
mice received 1.times.10.sup.9 drp/limb. Twelve other mice received
1.times.10.sup.10 drp/limb AAV-GFP. Results of the treatment are
presented in FIGS. 1 through 17.
[0087] Treatment with rAAV follistatin-344 resulted in muscle
enhancement and improved muscle function in the treated animals and
it is contemplated that these results will translate into
therapeutic benefit in human MD patients treated with a myostatin
inhibitor of the invention.
Example 4
[0088] Inclusion body myositis (IBM) is an inflammatory muscle
disease characterized by progressive muscle weakness and wasting.
The disorder is similar to another inflammatory myopathy called
polymyositis. IBM is often the diagnosis for cases of polymyositis
that are unresponsive to therapy, but IBM has its own distinctive
features. The onset of muscle weakness in IBM is generally gradual
(over months or years). Falling and tripping are usually the first
noticeable symptoms. For some patients the disorder begins with
weakness in the hands causing difficulty with gripping, pinching,
and buttoning. IBM occurs more frequently in men than in women and
affects both the proximal (closest to the center of the body) and
distal (farthest from the center of the body) muscles. There may be
weakness of the wrist and finger muscles and atrophy of the
quadricep muscles in the legs. Atrophy or shrinking of the forearms
is also characteristic. Difficulty swallowing (dysphagia) occurs in
approximately half of IBM cases. Symptoms of the disease usually
begin after the age of 50, although the disease can occur earlier.
IBM is generally resistant to all therapies, and its rate of
progression appears to be unaffected by any currently available
treatments.
[0089] It is contemplated that muscle enhancement and particularly
quadriceps muscle enhancement will benefit patients suffering from
sporadic IBM (sIBM). Enhancement of muscle and/or improved muscle
function resulting from delivering follistatin using a rAAV may be
confirmed as described below where methods of treatment of mdx mice
and sIBM human patients are set out.
Treatment of mdx Mice
[0090] C57B1/10 (wild-type) and mdx animals (Bogdanovich et al.,
supra) receive bilateral injections using a 26 gauge Hamilton
needle of rAAV follistatin-344 into the quadriceps at 3 weeks of
age (n=8 animals/dosage/vector). Four doses are tested,
1.times.10.sup.11, 1.times.10.sup.10, 1.times.10.sup.9,
1.times.10.sup.8 viral particles per quadriceps. One group of
animals (n=8) will be injected with AAV.CMV.GFP (rAAV comprising
DNA encoding green fluorescent protein linked to the CMV promoter)
as a control using the high dosage; 1.times.10.sup.11 viral
particles. Tacrolimus and MMF were given daily to animals 1 week
prior to viral delivery and for 8 weeks following viral gene
delivery. Doses were based on comparable schedules to patient
dosing (0.2 mg/kg tacrolimus and 25 mg/kg MMF).
[0091] Levels of follistatin were measured monthly. Blood was
collected by retro-orbital eye bleeds (routinely performed in our
lab) and serum separated in serum-separator tubes. A commercially
available ELISA assay kit specific for human follistatin is
available (R&D Systems) and may be used to detect follistatin.
Animals were sacrificed at 4 months of age. The quadriceps,
tibialis anterior, extensor digitorum longus muscles,
gastrocnemius, soleus, plantaris, diaphragm and biceps femoris
muscles were dissected from each side of the animals. Muscles were
mounted and snap frozen in liquid nitrogen-cooled isopentane, and
cross-sectioned at 8-12 .mu.m on a cryostat at -18-20.degree. C.
followed by histopathology stains (trichrome and H&E). To
distinguish between hypertrophy and hyperplasia, morphometric
examination of the muscles was performed using systematic sampling
of unbiased counting frames using a semi-automatic stereology
system and morphometric analysis will be performed using Metamorph.
Pathologic irregularities including fibrosis, inflammation and
cytoplasmic bodies were noted (FIGS. 12-14). Muscle hypertrophy was
noted in those animals receiving follistatin treatment (FIG. 15),
and they also produce higher numbers of revertant fibers in
gastrocnemius muscle (FIG. 16).
[0092] Exercise studies done on 8-week old mdx animals that were
treated with AAV-follistatin were compared to non-exercised animals
as well as wild type non-exercised animals. The results show that
administration of AAV-follistatin mice could perform better than
both the non-exercised mdx and non-exercised wild type mice in
endurance as well as accelerating RotaRod tests (FIG. 17).
[0093] rAAV1-follistatin virus is produced in 293 cells by calcium
phosphate transient transfection using the AAV vector plasmid
containing the AAV1 inverted terminal repeats and using pXR1 helper
plasmid providing rep and cap serotype 1 in trans, and
pHelper-Adenoviral plasmid [Xiao and Samulski, J. Virol., 72(3):
2224-2232 (1998)]. Three days following transfection, cells are
harvested, freeze thawed and purified by cesium chloride density
gradient ultracentrifugation. Fractions containing virus are
dialyzed against Hepes buffered saline. Determination of viral
titer was determined using real time quantitative PCR as well as
functional testing of transgene expression by limiting dilutions of
virus on 293 cells using immunohistochemistry.
[0094] Statistical Analysis: Statistical analysis was performed by
multi-way ANOVA followed by a Bonferroni post-hoc analysis of means
differences between groups (InStat and GraphPad Software).
Treatment of sIBM Human Patients
[0095] Patients receive an immunosuppression regimen of tacrolimus
and MMF during the study period. One group of patients is injected
in the quadriceps with rAAV follistatin-344 and the other group
receives sham injections, Since the patients in the trial will
receive an immunosuppression regimen that could influence their
course, at minimum a separate group receiving tacrolimus and MMF
should be treated to distinguish the effects of the drug regimen
from gene transfer.
[0096] Six sIBM patients will be included based on the following
criteria. Subjects must fulfill the following characteristic
features of sIBM a) duration of illness >6 months, b) age of
onset >30 yrs; c) quadriceps muscle strength must be in the MRC
grade 4 range; d) muscle biopsy proven diagnosis of IBM: (including
mononuclear cell inflammation, vacuolated muscle fibers and either
intracellular amyloid deposits or 15-18 nm tubulofilaments by EM).
Sexually active patients must also be willing to practice a
reliable method of contraception during the study. Exclusion
Criteria will be active viral infection, concomitant illness or
requirement for chronic drug treatment that in the opinion of the
PI creates unnecessary risks for gene transfer or conflicts with
immunosuppressive regimen and pregnant women
[0097] Dose escalation study of rAAV1 carrying the human
follistatin gene under control of the CMV promoter (rAAV
follistatin-344) given as a multiple intramuscular injections to
the quadriceps muscles on both sides. The planned dose for cohort 1
(three patients) will be 3.times.10.sup.12 [in six divided
quadriceps muscle injections of 2.5.times.10.sup.11 viral genomes
(vg)] followed by cohort 2 receiving 3.times.10.sup.13 (in six
divided quadriceps muscle injections of 2.5.times.10.sup.12 vg).
Patients will be injected at six week intervals. Patients will
receive tacrolimus (0.2 mg) and mycophenolate mofetil (1 g BID)
daily starting one week prior to gene transfer and drug will
continue for at least six months post gene transfer. Patients may
opt to continue the drug depending on the discretion of the
principal investigator. At minimum a separate, parallel group of
IBM patients will receive immunosuppression using tacrolimus and
MMF will be compared to the gene transfer cohort.
[0098] Baseline measures to be taken prior to injection (day-7 to
day-1) are quantitative muscle testing (Maximum voluntary isometric
contractions or MVICT) to measure quadriceps (knee extensors)
muscle strength and hand strength will be assessed with a grip
dynamometer. MVICT on additional muscles including elbow flexion
and extension and knee flexion are also obtained. These will be the
muscles used to evaluate strength following gene transfer.
Functional testing will include time to climb four standard steps,
time to walk 30 feet, and time to get up from a chair. Baseline
laboratory work will include CBC, platelets, blood urea nitrogen
(BUN), GGT, bilirubin, alkaline phosphatase, creatinine, amylase,
serum protein electrophoresis, protime, and PTT, neutralizing
antibodies to AAV and western blot detection of antibodies to
follistatin. Patients will require hepatitis screening, chest
x-ray, echocardiogram, and EKG. Females of childbearing potential
will have a pregnancy test. Adult males will be asked to provide a
semen sample.
[0099] Patients will return to a designated monitored bed following
gene transfer and vital signs will be obtained hourly for four
hours following the injection and then every 4 hours for 3 days
prior to discharge. Patients will return for follow up visits on
days 7, 14, 30, 60, and 90. Muscle biopsies will be performed on
both quadriceps muscles on day 90. Blood will be taken for
neutralizing antibody to AAV1, and antibody to follistatin at each
visit. In addition, ELISpots will be performed using capsid
peptides to establish T cell responses to rAAV1 and follistatin. On
days 14, 30, 60, and 90, a more comprehensive battery of tests will
include GGT, bilirubin, BUN, alkaline phosphatase, creatinine, CBC,
platelets, amylase, cholesterol, triglycerides. Semen samples will
be requested on days 60 and 90. Muscle will be studied using
multiple serial sections. For leukocyte markers (CD45, CD3, CD4,
CD8, MAC 387). Muscle will also be examined for histological
appearance using modified trichrome, H & E, oxidative enzymes,
and ATPase. Muscle sections will also be pooled for PCR analysis
for viral DNA. Patients will be followed for every six months for
two years.
[0100] Muscle strength based on MVICT of each individual muscle
including quadriceps, knee extensors, elbow extensors, and elbow
flexors and hand grip dynamometer will be performed prior to gene
transfer and at six months (completion of study). The best of three
measures at each of these time points will be used for analysis. An
intermediate time point will be obtained at 3 months but used only
to evaluate as a safety measure in case of adverse effects of the
gene transfer. Muscle biopsy will be performed on both quadriceps
post gene transfer. This muscle will not undergo biopsy pre-gene
transfer for a variety of reasons. First, it will be too invasive
to do biopsies on both quadriceps muscles before and after. The
post gene transfer biopsy at six months will be necessary to
establish the size of individual muscle fibers and degree of
inflammation. Fiber size distribution histograms (#/mm2) will be
obtained from 5 randomly selected areas of the removed muscle (one
central and four peripheral). In addition, fiber type histograms
will be analyzed separately to determine if there is a preferential
effect. Muscle will also be analyzed for number and distribution of
T and B cells and macrophages, number of internal nuclei, number of
muscle fibers undergoing necrosis, and number of regenerating
muscle fibers. Vector titers in the muscle will be determined in
the tissue by quantitative PCR.
[0101] Outcome variables will include changes from baseline to 6
months with a two-way analysis of variance model with 24-week
change from baseline as the dependent variable and treatment group
as the independent variable. An F test will be performed for
significance of the difference in the adjusted treatment group
means, and a 95% CI for the difference will be constructed. This
analysis will apply mainly to MVICT but will also be applied to
variables in the muscle biopsies between treatment groups.
Example 5
[0102] To demonstrate the effect of AAV delivery of various
myostatin inhibitors in vivo, mice were treated with AAV1 according
to the present invention. Briefly, 1.times.10.sup.11 AAV1 viral
particles were administered per animal. Recombinant AAV
administered were: rAAV follistatin-344, rAAV encoding FLRG, rAAV
encoding GASP-1, or rAAV encoding GFP. The DNA and amino acid
sequences of FLRG are respectively set out in SEQ ID NOs: 7 and 8
while the DNA and amino acid sequences of GASP-1 are respectively
set out in SEQ ID NOs: 9 and 10. The rAAV were administered
bilaterally into the quadriceps and tibialis anterior muscles of
4-week-old wild-type C57B1/6 mice. Results are presented in FIG.
18.
[0103] All animals treated with the myostatin inhibitors
demonstrated an increase in body mass with an observable gross
enhancement of muscles when analyzed at 725-days of age compared to
GFP-treated controls (FIG. 18a,b). Evaluation of individual muscle
weights showed an increase in muscle mass for all myostatin
inhibitor-treated animals, with the greatest increase in FS-treated
animals compared to GFP controls. The increased muscle mass was
found in the injected hindlimb muscles as well as remote muscles to
the injection site, such as the triceps. Thus, these inhibitors
were secreted into the circulation from the site of muscle
injection, enhancing skeletal muscle mass at remote sites (FIG.
18c). The enlarged muscle mass was accompanied by functional
improvement demonstrated by an increase in hindlimb grip strength
(FIG. 18d). There was no effect on heart mass or histological
appearance of cardiomyocytes, indicating that myostatin inhibition
was selective to skeletal muscle tissue (data not shown). No change
in reproductive capacity in mice treated with rAAV follistatin-344
was found. Furthermore, no histological/pathological alterations in
the gonadal tissue of rAAV follistatin-344-treated mice was seen
compared to controls (data not shown).
[0104] The results discussed above demonstrate that administration
of AAV encoding myostatin inhibitors according to the invention
enhances muscle and improves muscle function in vivo.
Example 6
[0105] The ability of rAAV follistain-344 to increase muscle
strength in older mdx animals was also examined.
[0106] In experiments similar to those described in Example 3
and/or 4, at 210 days of age it was found that high dose
(1.times.10.sup.11 AAV1 particles) FS administration increased
muscle strength versus administration of AAV1-GFP in control
animals .about.60 days post administration (see FIG. 19). These
results demonstrated that myostatin inhibition by FS treatment was
beneficial in aged mdx animals that had undergone multiple rounds
of muscle degeneration and regeneration.
[0107] Translation to a clinical parallel suggests that
AAV-mediated FS gene therapy is indicated for the older DMD patient
independent of replacing a missing gene and is indicated in
combination therapy similar to that demonstrated for IGF-1 and
mini-dystrophin gene replacement [Abmayr et al., Mol Ther.,
12:441-450 (2005)].
Example 7
[0108] The effects of rAAV-follistatin-344 were studied in
non-human primates using cynomologous macaques.
[0109] The treatment included delivery of the follistatin sequences
either under the control of the CMV promoter (rAAV-follistatin-344)
or the mouse creatine kinase (MCK) promoter, to test the efficacy
of a stronger (CMV) promoter versus a muscle specific promoter. The
rAAV comprising the MCK promoter are designated "rAAV MCK
follistatin-344" herein. Animals were injected into the quadriceps
of one of their hindlimbs with 1.times.10.sup.13 viral genomes in a
total volume of 1.5 ml spread over three injections per quadriceps
muscle in a volume of 0.5 ml per injection. Studies conducted to
date have been accompanied by an immunosuppression regimen of
Tacrolimus (1.5 mg/kg body weight) and microphenylate (50 mg/kg
body weight) administered daily 1 week prior to vector delivery and
daily post-vector injection. Animals have been followed bi-weekly
for any evidence of toxicity, immune response and levels of
Follistatin. No adverse events have been noted in any of the
studies conducted to date, that includes a total of 6 animals (3
animals with CMV-, 3 animals with MCK-Follistatin). All animals
have had detectable levels of Follistatin detected in the plasma,
with the greatest amounts found in the CMV-Follistatin treated
animals (FIG. 20).
[0110] A biopsy of muscle from the rAAV MCK follistatin-344 treated
animals demonstrated a significant increase in the diameter of
myofibers in the injected muscles indicating that the lower
expressed MCK-Follistatin was having biological effect to induce
muscle hypertrophy in treated animals at 14-weeks post-injection
(FIG. 21).
[0111] While the present invention has been described in terms of
specific embodiments, it is understood that variations and
modifications will occur to those skilled in the art. Accordingly,
only such limitations as appear in the claims should be placed on
the invention.
[0112] All documents referred to in this application are hereby
incorporated by reference in their entirety.
Sequence CWU 1
1
1211189DNAHomo sapiensmisc_featureFollistatin UCSD 1atggtccgcg
cgaggcacca gccgggtggg ctttgcctcc tgctgctgct gctctgccag 60ttcatggagg
accgcagtgc ccaggctggg aactgctggc tccgtcaagc gaagaacggc
120cgctgccagg tcctgtacaa gaccgaactg agcaaggagg agtgctgcag
caccggccgg 180ctgagcacct cgtggaccga ggaggacgtg aatgacaaca
cactcttcaa gtggatgatt 240ttcaacgggg gcgcccccaa ctgcatcccc
tgtaaagaaa cgtgtgagaa cgtggactgt 300ggacctggga aaaaatgccg
aatgaacaag aagaacaaac cccgctgcgt ctgcgccccg 360gattgttcca
acatcacctg gaagggtcca gtctgcgggc tggatgggaa aacctaccgc
420aatgaatgtg cactcctaaa ggcaagatgt aaagagcagc cagaacaact
gaaagtccag 480taccaaggca gatgtaaaaa gacttgtcgg gatgttttct
gtccaggcag ctccacatgt 540gtggtggacc agaccaataa tgcctactgt
gtgacctgta atcggatttg cccagagcct 600gcttcctctg agcaatatct
ctgtgggaat gatggagtca cctactccag tgcctgccac 660ctgagaaagg
ctacctgcct gctgggcaga tctattggat tagcctatga gggaaagtgt
720atcaaagcaa agtcctgtga agatatccag tgcactggtg ggaaaaaatg
tttatgggat 780ttcaaggttg ggagaggccg gtgttccctc tgtgatgagc
tgtgccctga cagtaagtcg 840gatgagcctg tctgtgccag tgacaatgcc
acttatgcca gcgagtgtgc catgaaggaa 900gctgcctgct cctcaggtgt
gctactggaa gtaaagcact ccggatcttg caactgaatc 960tgcccgtaaa
acctgagcca ttgattcttc agaactttct gcagtttttg acttcataga
1020ttatgcttta aaaaaatttt tttaacttat tgcataacag cagatgccaa
aaacaaaaaa 1080agcatctcac tgcaagtcac ataaaaatgc aacgctgtaa
tatggctgta tcagagggct 1140ttgaaaacat acactgagct gcttctgcgc
tgttgttgtc cgtatttaa 11892391PRTHomo sapiensmisc_featureFollistatin
UCSD 2Met Val Arg Ala Arg His Gln Pro Gly Gly Leu Cys Leu Leu Leu
Leu 1 5 10 15 Leu Leu Cys Gln Phe Met Glu Asp Arg Ser Ala Gln Ala
Gly Asn Cys 20 25 30 Trp Leu Arg Gln Ala Lys Asn Gly Arg Cys Gln
Val Leu Tyr Lys Thr 35 40 45 Glu Leu Ser Lys Glu Glu Cys Cys Ser
Thr Gly Arg Leu Ser Thr Ser 50 55 60 Trp Thr Glu Glu Asp Val Asn
Asp Asn Thr Leu Phe Lys Trp Met Ile 65 70 75 80 Phe Asn Gly Gly Ala
Pro Asn Cys Ile Pro Cys Lys Glu Thr Cys Glu 85 90 95 Asn Val Asp
Cys Gly Pro Gly Lys Lys Cys Arg Met Asn Lys Lys Asn 100 105 110 Lys
Pro Arg Cys Val Cys Ala Pro Asp Cys Ser Asn Ile Thr Trp Lys 115 120
125 Gly Pro Val Cys Gly Leu Asp Gly Lys Thr Tyr Arg Asn Glu Cys Ala
130 135 140 Leu Leu Lys Ala Arg Cys Lys Glu Gln Pro Glu Gln Leu Lys
Val Gln 145 150 155 160 Tyr Gln Gly Arg Cys Lys Lys Thr Cys Arg Asp
Val Phe Cys Pro Gly 165 170 175 Ser Ser Thr Cys Val Val Asp Gln Thr
Asn Asn Ala Tyr Cys Val Thr 180 185 190 Cys Asn Arg Ile Cys Pro Glu
Pro Ala Ser Ser Glu Gln Tyr Leu Cys 195 200 205 Gly Asn Asp Gly Val
Thr Tyr Ser Ser Ala Cys His Leu Arg Lys Ala 210 215 220 Thr Cys Leu
Leu Gly Arg Ser Ile Gly Leu Ala Tyr Glu Gly Lys Cys 225 230 235 240
Ile Lys Ala Lys Ser Cys Glu Asp Ile Gln Cys Thr Gly Gly Lys Lys 245
250 255 Cys Leu Trp Asp Phe Lys Val Gly Arg Gly Arg Cys Ser Leu Cys
Asp 260 265 270 Glu Leu Cys Pro Asp Ser Lys Ser Asp Glu Pro Val Cys
Ala Ser Asp 275 280 285 Asn Ala Thr Tyr Ala Ser Glu Cys Ala Met Lys
Glu Ala Ala Cys Ser 290 295 300 Ser Gly Val Leu Leu Glu Val Lys His
Ser Gly Ser Cys Asn Ile Cys 305 310 315 320 Pro Asn Leu Ser His Phe
Phe Arg Thr Phe Cys Ser Phe Leu His Arg 325 330 335 Leu Cys Phe Lys
Lys Ile Phe Leu Thr Tyr Cys Ile Thr Ala Asp Ala 340 345 350 Lys Asn
Lys Lys Ser Ile Ser Leu Gln Val Thr Lys Cys Asn Ala Val 355 360 365
Ile Trp Leu Tyr Gln Arg Ala Leu Lys Thr Tyr Thr Glu Leu Leu Leu 370
375 380 Arg Cys Cys Cys Pro Tyr Leu 385 390 31035DNAHomo
sapiensmisc_featureFollistatin 344 precursor 3atggtccgcg cgaggcacca
gccgggtggg ctttgcctcc tgctgctgct gctctgccag 60ttcatggagg accgcagtgc
ccaggctggg aactgctggc tccgtcaagc gaagaacggc 120cgctgccagg
tcctgtacaa gaccgaactg agcaaggagg agtgctgcag caccggccgg
180ctgagcacct cgtggaccga ggaggacgtg aatgacaaca cactcttcaa
gtggatgatt 240ttcaacgggg gcgcccccaa ctgcatcccc tgtaaagaaa
cgtgtgagaa cgtggactgt 300ggacctggga aaaaatgccg aatgaacaag
aagaacaaac cccgctgcgt ctgcgccccg 360gattgttcca acatcacctg
gaagggtcca gtctgcgggc tggatgggaa aacctaccgc 420aatgaatgtg
cactcctaaa ggcaagatgt aaagagcagc cagaactgga agtccagtac
480caaggcagat gtaaaaagac ttgtcgggat gttttctgtc caggcagctc
cacatgtgtg 540gtggaccaga ccaataatgc ctactgtgtg acctgtaatc
ggatttgccc agagcctgct 600tcctctgagc aatatctctg tgggaatgat
ggagtcacct actccagtgc ctgccacctg 660agaaaggcta cctgcctgct
gggcagatct attggattag cctatgaggg aaagtgtatc 720aaagcaaagt
cctgtgaaga tatccagtgc actggtggga aaaaatgttt atgggatttc
780aaggttggga gaggccggtg ttccctctgt gatgagctgt gccctgacag
taagtcggat 840gagcctgtct gtgccagtga caatgccact tatgccagcg
agtgtgccat gaaggaagct 900gcctgctcct caggtgtgct actggaagta
aagcactccg gatcttgcaa ctccatttcg 960gaagacaccg aggaagagga
ggaagatgaa gaccaggact acagctttcc tatatcttct 1020attctagagt ggtaa
10354344PRTHomo sapiensmisc_featureFollistatin 344 precursor 4Met
Val Arg Ala Arg His Gln Pro Gly Gly Leu Cys Leu Leu Leu Leu 1 5 10
15 Leu Leu Cys Gln Phe Met Glu Asp Arg Ser Ala Gln Ala Gly Asn Cys
20 25 30 Trp Leu Arg Gln Ala Lys Asn Gly Arg Cys Gln Val Leu Tyr
Lys Thr 35 40 45 Glu Leu Ser Lys Glu Glu Cys Cys Ser Thr Gly Arg
Leu Ser Thr Ser 50 55 60 Trp Thr Glu Glu Asp Val Asn Asp Asn Thr
Leu Phe Lys Trp Met Ile 65 70 75 80 Phe Asn Gly Gly Ala Pro Asn Cys
Ile Pro Cys Lys Glu Thr Cys Glu 85 90 95 Asn Val Asp Cys Gly Pro
Gly Lys Lys Cys Arg Met Asn Lys Lys Asn 100 105 110 Lys Pro Arg Cys
Val Cys Ala Pro Asp Cys Ser Asn Ile Thr Trp Lys 115 120 125 Gly Pro
Val Cys Gly Leu Asp Gly Lys Thr Tyr Arg Asn Glu Cys Ala 130 135 140
Leu Leu Lys Ala Arg Cys Lys Glu Gln Pro Glu Leu Glu Val Gln Tyr 145
150 155 160 Gln Gly Arg Cys Lys Lys Thr Cys Arg Asp Val Phe Cys Pro
Gly Ser 165 170 175 Ser Thr Cys Val Val Asp Gln Thr Asn Asn Ala Tyr
Cys Val Thr Cys 180 185 190 Asn Arg Ile Cys Pro Glu Pro Ala Ser Ser
Glu Gln Tyr Leu Cys Gly 195 200 205 Asn Asp Gly Val Thr Tyr Ser Ser
Ala Cys His Leu Arg Lys Ala Thr 210 215 220 Cys Leu Leu Gly Arg Ser
Ile Gly Leu Ala Tyr Glu Gly Lys Cys Ile 225 230 235 240 Lys Ala Lys
Ser Cys Glu Asp Ile Gln Cys Thr Gly Gly Lys Lys Cys 245 250 255 Leu
Trp Asp Phe Lys Val Gly Arg Gly Arg Cys Ser Leu Cys Asp Glu 260 265
270 Leu Cys Pro Asp Ser Lys Ser Asp Glu Pro Val Cys Ala Ser Asp Asn
275 280 285 Ala Thr Tyr Ala Ser Glu Cys Ala Met Lys Glu Ala Ala Cys
Ser Ser 290 295 300 Gly Val Leu Leu Glu Val Lys His Ser Gly Ser Cys
Asn Ser Ile Ser 305 310 315 320 Glu Asp Thr Glu Glu Glu Glu Glu Asp
Glu Asp Gln Asp Tyr Ser Phe 325 330 335 Pro Ile Ser Ser Ile Leu Glu
Trp 340 5954DNAHomo sapiensmisc_featureFollistatin 317 precursor
5atggtccgcg cgaggcacca gccgggtggg ctttgcctcc tgctgctgct gctctgccag
60ttcatggagg accgcagtgc ccaggctggg aactgctggc tccgtcaagc gaagaacggc
120cgctgccagg tcctgtacaa gaccgaactg agcaaggagg agtgctgcag
caccggccgg 180ctgagcacct cgtggaccga ggaggacgtg aatgacaaca
cactcttcaa gtggatgatt 240ttcaacgggg gcgcccccaa ctgcatcccc
tgtaaagaaa cgtgtgagaa cgtggactgt 300ggacctggga aaaaatgccg
aatgaacaag aagaacaaac cccgctgcgt ctgcgccccg 360gattgttcca
acatcacctg gaagggtcca gtctgcgggc tggatgggaa aacctaccgc
420aatgaatgtg cactcctaaa ggcaagatgt aaagagcagc cagaactgga
agtccagtac 480caaggcagat gtaaaaagac ttgtcgggat gttttctgtc
caggcagctc cacatgtgtg 540gtggaccaga ccaataatgc ctactgtgtg
acctgtaatc ggatttgccc agagcctgct 600tcctctgagc aatatctctg
tgggaatgat ggagtcacct actccagtgc ctgccacctg 660agaaaggcta
cctgcctgct gggcagatct attggattag cctatgaggg aaagtgtatc
720aaagcaaagt cctgtgaaga tatccagtgc actggtggga aaaaatgttt
atgggatttc 780aaggttggga gaggccggtg ttccctctgt gatgagctgt
gccctgacag taagtcggat 840gagcctgtct gtgccagtga caatgccact
tatgccagcg agtgtgccat gaaggaagct 900gcctgctcct caggtgtgct
actggaagta aagcactccg gatcttgcaa ctga 9546317PRTHomo
sapiensmisc_featureFollistatin 317 precursor 6Met Val Arg Ala Arg
His Gln Pro Gly Gly Leu Cys Leu Leu Leu Leu 1 5 10 15 Leu Leu Cys
Gln Phe Met Glu Asp Arg Ser Ala Gln Ala Gly Asn Cys 20 25 30 Trp
Leu Arg Gln Ala Lys Asn Gly Arg Cys Gln Val Leu Tyr Lys Thr 35 40
45 Glu Leu Ser Lys Glu Glu Cys Cys Ser Thr Gly Arg Leu Ser Thr Ser
50 55 60 Trp Thr Glu Glu Asp Val Asn Asp Asn Thr Leu Phe Lys Trp
Met Ile 65 70 75 80 Phe Asn Gly Gly Ala Pro Asn Cys Ile Pro Cys Lys
Glu Thr Cys Glu 85 90 95 Asn Val Asp Cys Gly Pro Gly Lys Lys Cys
Arg Met Asn Lys Lys Asn 100 105 110 Lys Pro Arg Cys Val Cys Ala Pro
Asp Cys Ser Asn Ile Thr Trp Lys 115 120 125 Gly Pro Val Cys Gly Leu
Asp Gly Lys Thr Tyr Arg Asn Glu Cys Ala 130 135 140 Leu Leu Lys Ala
Arg Cys Lys Glu Gln Pro Glu Leu Glu Val Gln Tyr 145 150 155 160 Gln
Gly Arg Cys Lys Lys Thr Cys Arg Asp Val Phe Cys Pro Gly Ser 165 170
175 Ser Thr Cys Val Val Asp Gln Thr Asn Asn Ala Tyr Cys Val Thr Cys
180 185 190 Asn Arg Ile Cys Pro Glu Pro Ala Ser Ser Glu Gln Tyr Leu
Cys Gly 195 200 205 Asn Asp Gly Val Thr Tyr Ser Ser Ala Cys His Leu
Arg Lys Ala Thr 210 215 220 Cys Leu Leu Gly Arg Ser Ile Gly Leu Ala
Tyr Glu Gly Lys Cys Ile 225 230 235 240 Lys Ala Lys Ser Cys Glu Asp
Ile Gln Cys Thr Gly Gly Lys Lys Cys 245 250 255 Leu Trp Asp Phe Lys
Val Gly Arg Gly Arg Cys Ser Leu Cys Asp Glu 260 265 270 Leu Cys Pro
Asp Ser Lys Ser Asp Glu Pro Val Cys Ala Ser Asp Asn 275 280 285 Ala
Thr Tyr Ala Ser Glu Cys Ala Met Lys Glu Ala Ala Cys Ser Ser 290 295
300 Gly Val Leu Leu Glu Val Lys His Ser Gly Ser Cys Asn 305 310 315
7792DNAHomo sapiensmisc_featureFLRG 7atgcgtcccg gggcgccagg
gccactctgg cctctgccct ggggggccct ggcttgggcc 60gtgggcttcg tgagctccat
gggctcgggg aaccccgcgc ccggtggtgt ttgctggctc 120cagcagggcc
aggaggccac ctgcagcctg gtgctccaga ctgatgtcac ccgggccgag
180tgctgtgcct ccggcaacat tgacaccgcc tggtccaacc tcacccaccc
ggggaacaag 240atcaacctcc tcggcttctt gggccttgtc cactgccttc
cctgcaaaga ttcgtgcgac 300ggcgtggagt gcggcccggg caaggcgtgc
cgcatgctgg ggggccgccc gcgctgcgag 360tgcgcgcccg actgctcggg
gctcccggcg cggctgcagg tctgcggctc agacggcgcc 420acctaccgcg
acgagtgcga gctgcgcgcc gcgcgctgcc gcggccaccc ggacctgagc
480gtcatgtacc ggggccgctg ccgcaagtcc tgtgagcacg tggtgtgccc
gcggccacag 540tcgtgcgtcg tggaccagac gggcagcgcc cactgcgtgg
tgtgtcgagc ggcgccctgc 600cctgtgccct ccagccccgg ccaggagctt
tgcggcaaca acaacgtcac ctacatctcc 660tcgtgccaca tgcgccaggc
cacctgcttc ctgggccgct ccatcggcgt gcgccacgcg 720ggcagctgcg
caggcacccc tgaggagccg ccaggtggtg agtctgcaga agaggaagag
780aacttcgtgt ga 7928263PRTHomo sapiensmisc_featureFLRG 8Met Arg
Pro Gly Ala Pro Gly Pro Leu Trp Pro Leu Pro Trp Gly Ala 1 5 10 15
Leu Ala Trp Ala Val Gly Phe Val Ser Ser Met Gly Ser Gly Asn Pro 20
25 30 Ala Pro Gly Gly Val Cys Trp Leu Gln Gln Gly Gln Glu Ala Thr
Cys 35 40 45 Ser Leu Val Leu Gln Thr Asp Val Thr Arg Ala Glu Cys
Cys Ala Ser 50 55 60 Gly Asn Ile Asp Thr Ala Trp Ser Asn Leu Thr
His Pro Gly Asn Lys 65 70 75 80 Ile Asn Leu Leu Gly Phe Leu Gly Leu
Val His Cys Leu Pro Cys Lys 85 90 95 Asp Ser Cys Asp Gly Val Glu
Cys Gly Pro Gly Lys Ala Cys Arg Met 100 105 110 Leu Gly Gly Arg Pro
Arg Cys Glu Cys Ala Pro Asp Cys Ser Gly Leu 115 120 125 Pro Ala Arg
Leu Gln Val Cys Gly Ser Asp Gly Ala Thr Tyr Arg Asp 130 135 140 Glu
Cys Glu Leu Arg Ala Ala Arg Cys Arg Gly His Pro Asp Leu Ser 145 150
155 160 Val Met Tyr Arg Gly Arg Cys Arg Lys Ser Cys Glu His Val Val
Cys 165 170 175 Pro Arg Pro Gln Ser Cys Val Val Asp Gln Thr Gly Ser
Ala His Cys 180 185 190 Val Val Cys Arg Ala Ala Pro Cys Pro Val Pro
Ser Ser Pro Gly Gln 195 200 205 Glu Leu Cys Gly Asn Asn Asn Val Thr
Tyr Ile Ser Ser Cys His Met 210 215 220 Arg Gln Ala Thr Cys Phe Leu
Gly Arg Ser Ile Gly Val Arg His Ala 225 230 235 240 Gly Ser Cys Ala
Gly Thr Pro Glu Glu Pro Pro Gly Gly Glu Ser Ala 245 250 255 Glu Glu
Glu Glu Asn Phe Val 260 91716DNAHomo sapiensmisc_featureGASP-1
9atgtgtgccc cagggtatca tcggttctgg tttcactggg ggctgctgtt gctgctgctc
60ctcgaggctc cccttcgagg cctagcactg ccacccatcc gatactccca tgcgggcatc
120tgccccaacg acatgaaccc caacctctgg gtggatgccc agagcacctg
caagcgagag 180tgtgaaacag accaggaatg tgagacctat gagaaatgct
gccccaatgt gtgtgggacc 240aagagctgtg tggcagcccg ctacatggat
gtgaaaggga agaaggggcc tgtaggcatg 300cccaaggagg ccacatgtga
ccatttcatg tgcctgcagc agggctctga gtgtgacatc 360tgggacggcc
agcccgtgtg taagtgcaaa gatcgctgtg agaaggagcc cagcttcacc
420tgtgcctctg atggccttac ctactacaac cgttgcttca tggacgccga
agcctgctcc 480aagggcatca cactgtctgt ggtcacctgt cgttatcact
tcacctggcc taacaccagc 540cctccaccgc ctgagaccac ggtgcatccc
accaccgcct ctccggagac tctcgggctg 600gacatggcag ccccagccct
gctcaaccac cctgtccatc agtcagtcac cgtgggtgag 660actgtgagtt
tcctctgtga cgtggtaggc cggcctcggc cagagctcac ttgggagaaa
720cagctggagg accgagagaa tgttgtcatg aggcccaacc acgtgcgtgg
taatgtggtg 780gtcactaaca ttgcccagct ggtcatctac aacgtccagc
cccaggatgc tggcatatac 840acctgtacag ctcgaaatgt cgctggtgtc
ctgagggctg acttcccgtt gtcggtggtc 900aggggtggtc aggccagggc
cacttcagag agcagtctca atggcacagc ttttccagca 960acagagtgcc
tgaagccccc agacagtgag gactgtggag aggagcagac acgctggcac
1020ttcgacgccc aggctaacaa ctgcctcact ttcacctttg gccactgcca
ccacaatctc 1080aaccactttg agacctacga ggcctgtatg ctggcttgta
tgagtgggcc attggccacc 1140tgcagcctgc ctgccctgca agggccttgc
aaagcttatg tcccacgctg ggcctacaac 1200agccagacag gcctatgcca
gtccttcgtc tatggcggct gtgagggcaa cggtaacaac 1260tttgaaagcc
gtgaggcttg tgaggagtcg tgtcccttcc cgaggggtaa ccagcactgc
1320cgggcctgca agccccggca aaaacttgtt accagcttct gtcggagtga
ctttgtcatc 1380ctgggcaggg tctctgagct gaccgaggag caagactcgg
gccgtgccct ggtgaccgtg 1440gatgaggtct taaaagatga gaagatgggc
ctcaagtttc tgggccggga gcctctggaa 1500gtcaccctgc ttcatgtaga
ctggacctgt ccttgcccca acgtgacagt gggtgagaca 1560ccactcatca
tcatggggga ggtggacggc ggcatggcca tgctgagacc cgatagcttt
1620gtgggggcat cgagcacacg gcgggtcagg aagctccgtg aggtcatgta
caagaaaacc 1680tgtgacgtcc tcaaggactt cctgggcttg caatga
171610571PRTHomo sapiensmisc_featureGASP-1 10Met Cys Ala Pro Gly
Tyr His Arg Phe Trp Phe His Trp Gly Leu Leu 1 5 10 15 Leu Leu Leu
Leu Leu Glu Ala Pro Leu Arg Gly Leu Ala Leu Pro Pro 20 25 30 Ile
Arg
Tyr Ser His Ala Gly Ile Cys Pro Asn Asp Met Asn Pro Asn 35 40 45
Leu Trp Val Asp Ala Gln Ser Thr Cys Lys Arg Glu Cys Glu Thr Asp 50
55 60 Gln Glu Cys Glu Thr Tyr Glu Lys Cys Cys Pro Asn Val Cys Gly
Thr 65 70 75 80 Lys Ser Cys Val Ala Ala Arg Tyr Met Asp Val Lys Gly
Lys Lys Gly 85 90 95 Pro Val Gly Met Pro Lys Glu Ala Thr Cys Asp
His Phe Met Cys Leu 100 105 110 Gln Gln Gly Ser Glu Cys Asp Ile Trp
Asp Gly Gln Pro Val Cys Lys 115 120 125 Cys Lys Asp Arg Cys Glu Lys
Glu Pro Ser Phe Thr Cys Ala Ser Asp 130 135 140 Gly Leu Thr Tyr Tyr
Asn Arg Cys Phe Met Asp Ala Glu Ala Cys Ser 145 150 155 160 Lys Gly
Ile Thr Leu Ser Val Val Thr Cys Arg Tyr His Phe Thr Trp 165 170 175
Pro Asn Thr Ser Pro Pro Pro Pro Glu Thr Thr Val His Pro Thr Thr 180
185 190 Ala Ser Pro Glu Thr Leu Gly Leu Asp Met Ala Ala Pro Ala Leu
Leu 195 200 205 Asn His Pro Val His Gln Ser Val Thr Val Gly Glu Thr
Val Ser Phe 210 215 220 Leu Cys Asp Val Val Gly Arg Pro Arg Pro Glu
Leu Thr Trp Glu Lys 225 230 235 240 Gln Leu Glu Asp Arg Glu Asn Val
Val Met Arg Pro Asn His Val Arg 245 250 255 Gly Asn Val Val Val Thr
Asn Ile Ala Gln Leu Val Ile Tyr Asn Val 260 265 270 Gln Pro Gln Asp
Ala Gly Ile Tyr Thr Cys Thr Ala Arg Asn Val Ala 275 280 285 Gly Val
Leu Arg Ala Asp Phe Pro Leu Ser Val Val Arg Gly Gly Gln 290 295 300
Ala Arg Ala Thr Ser Glu Ser Ser Leu Asn Gly Thr Ala Phe Pro Ala 305
310 315 320 Thr Glu Cys Leu Lys Pro Pro Asp Ser Glu Asp Cys Gly Glu
Glu Gln 325 330 335 Thr Arg Trp His Phe Asp Ala Gln Ala Asn Asn Cys
Leu Thr Phe Thr 340 345 350 Phe Gly His Cys His His Asn Leu Asn His
Phe Glu Thr Tyr Glu Ala 355 360 365 Cys Met Leu Ala Cys Met Ser Gly
Pro Leu Ala Thr Cys Ser Leu Pro 370 375 380 Ala Leu Gln Gly Pro Cys
Lys Ala Tyr Val Pro Arg Trp Ala Tyr Asn 385 390 395 400 Ser Gln Thr
Gly Leu Cys Gln Ser Phe Val Tyr Gly Gly Cys Glu Gly 405 410 415 Asn
Gly Asn Asn Phe Glu Ser Arg Glu Ala Cys Glu Glu Ser Cys Pro 420 425
430 Phe Pro Arg Gly Asn Gln His Cys Arg Ala Cys Lys Pro Arg Gln Lys
435 440 445 Leu Val Thr Ser Phe Cys Arg Ser Asp Phe Val Ile Leu Gly
Arg Val 450 455 460 Ser Glu Leu Thr Glu Glu Gln Asp Ser Gly Arg Ala
Leu Val Thr Val 465 470 475 480 Asp Glu Val Leu Lys Asp Glu Lys Met
Gly Leu Lys Phe Leu Gly Arg 485 490 495 Glu Pro Leu Glu Val Thr Leu
Leu His Val Asp Trp Thr Cys Pro Cys 500 505 510 Pro Asn Val Thr Val
Gly Glu Thr Pro Leu Ile Ile Met Gly Glu Val 515 520 525 Asp Gly Gly
Met Ala Met Leu Arg Pro Asp Ser Phe Val Gly Ala Ser 530 535 540 Ser
Thr Arg Arg Val Arg Lys Leu Arg Glu Val Met Tyr Lys Lys Thr 545 550
555 560 Cys Asp Val Leu Lys Asp Phe Leu Gly Leu Gln 565 570
111035DNAHomo sapiensmisc_featureFollistatin 344 11atggtccgcg
cgaggcacca gccgggtggg ctttgcctcc tgctgctgct gctctgccag 60ttcatggagg
accgcagtgc ccaggctggg aactgctggc tccgtcaagc gaagaacggc
120cgctgccagg tcctgtacaa gaccgaactg agcaaggagg agtgctgcag
caccggccgg 180ctgagcacct cgtggaccga ggaggacgtg aatgacaaca
cactcttcaa gtggatgatt 240ttcaacgggg gcgcccccaa ctgcatcccc
tgtaaagaaa cgtgtgagaa cgtggactgt 300ggacctggga aaaaatgccg
aatgaacaag aagaacaaac cccgctgcgt ctgcgccccg 360gattgttcca
acatcacctg gaagggtcca gtctgcgggc tggatgggaa aacctaccgc
420aatgaatgtg cactcctaaa ggcaagatgt aaagagcagc cagaactgga
agtccagtac 480caaggcagat gtaaaaagac ttgtcgggat gttttctgtc
caggcagctc cacatgtgtg 540gtggaccaga ccaataatgc ctactgtgtg
acctgtaatc ggatttgccc agagcctgct 600tcctctgagc aatatctctg
tgggaatgat ggagtcacct actccagtgc ctgccacctg 660agaaaggcta
cctgcctgct gggcagatct attggattag cctatgaggg aaagtgtatc
720aaagcaaagt cctgtgaaga tatccagtgc actggtggga aaaaatgttt
atgggatttc 780aaggttggga gaggccggtg ttccctctgt gatgagctgt
gccctgacag taagtcggat 840gagcctgtct gtgccagtga caatgccact
tatgccagcg agtgtgccat gaaggaagct 900gcctgctcct caggtgtgct
actggaagta aagcactccg gatcttgcaa ctccatttcg 960gaagacaccg
aggaagagga ggaagatgaa gaccaggact acagctttcc tatatcttct
1020attctagagt ggtaa 103512344PRTHomo
sapiensmisc_featureFollistatin 344 12Met Val Arg Ala Arg His Gln
Pro Gly Gly Leu Cys Leu Leu Leu Leu 1 5 10 15 Leu Leu Cys Gln Phe
Met Glu Asp Arg Ser Ala Gln Ala Gly Asn Cys 20 25 30 Trp Leu Arg
Gln Ala Lys Asn Gly Arg Cys Gln Val Leu Tyr Lys Thr 35 40 45 Glu
Leu Ser Lys Glu Glu Cys Cys Ser Thr Gly Arg Leu Ser Thr Ser 50 55
60 Trp Thr Glu Glu Asp Val Asn Asp Asn Thr Leu Phe Lys Trp Met Ile
65 70 75 80 Phe Asn Gly Gly Ala Pro Asn Cys Ile Pro Cys Lys Glu Thr
Cys Glu 85 90 95 Asn Val Asp Cys Gly Pro Gly Lys Lys Cys Arg Met
Asn Lys Lys Asn 100 105 110 Lys Pro Arg Cys Val Cys Ala Pro Asp Cys
Ser Asn Ile Thr Trp Lys 115 120 125 Gly Pro Val Cys Gly Leu Asp Gly
Lys Thr Tyr Arg Asn Glu Cys Ala 130 135 140 Leu Leu Lys Ala Arg Cys
Lys Glu Gln Pro Glu Leu Glu Val Gln Tyr 145 150 155 160 Gln Gly Arg
Cys Lys Lys Thr Cys Arg Asp Val Phe Cys Pro Gly Ser 165 170 175 Ser
Thr Cys Val Val Asp Gln Thr Asn Asn Ala Tyr Cys Val Thr Cys 180 185
190 Asn Arg Ile Cys Pro Glu Pro Ala Ser Ser Glu Gln Tyr Leu Cys Gly
195 200 205 Asn Asp Gly Val Thr Tyr Ser Ser Ala Cys His Leu Arg Lys
Ala Thr 210 215 220 Cys Leu Leu Gly Arg Ser Ile Gly Leu Ala Tyr Glu
Gly Lys Cys Ile 225 230 235 240 Lys Ala Lys Ser Cys Glu Asp Ile Gln
Cys Thr Gly Gly Lys Lys Cys 245 250 255 Leu Trp Asp Phe Lys Val Gly
Arg Gly Arg Cys Ser Leu Cys Asp Glu 260 265 270 Leu Cys Pro Asp Ser
Lys Ser Asp Glu Pro Val Cys Ala Ser Asp Asn 275 280 285 Ala Thr Tyr
Ala Ser Glu Cys Ala Met Lys Glu Ala Ala Cys Ser Ser 290 295 300 Gly
Val Leu Leu Glu Val Lys His Ser Gly Ser Cys Asn Ser Ile Ser 305 310
315 320 Glu Asp Thr Glu Glu Glu Glu Glu Asp Glu Asp Gln Asp Tyr Ser
Phe 325 330 335 Pro Ile Ser Ser Ile Leu Glu Trp 340
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