U.S. patent application number 14/804756 was filed with the patent office on 2016-02-04 for neisseria meningitidis antigens and compositions.
This patent application is currently assigned to GLAXOSMITHKLINE BIOLOGICALS SA. The applicant listed for this patent is GlaxoSmithKline Biologicals SA. Invention is credited to Claire FRASER, Cesira GALEOTTI, Guido GRANDI, Erin HICKEY, Vega MASIGNANI, Marirosa MORA, Jeremy PETERSEN, Mariagrazia PIZZA, Rino RAPPUOLI, Giulio RATTI, Vincenzo SCARLATO, Maria SCARSELLI, Herve TETTELIN, J. Craig VENTER.
Application Number | 20160030545 14/804756 |
Document ID | / |
Family ID | 27574612 |
Filed Date | 2016-02-04 |
United States Patent
Application |
20160030545 |
Kind Code |
A1 |
FRASER; Claire ; et
al. |
February 4, 2016 |
NEISSERIA MENINGITIDIS ANTIGENS AND COMPOSITIONS
Abstract
The invention provides proteins from Neisseria meningitidis,
including the amino acid sequences and the corresponding nucleotide
sequences. The proteins are predicted to be useful antigens for
vaccines and/or diagnostics.
Inventors: |
FRASER; Claire; (Potomac,
MD) ; GALEOTTI; Cesira; (Poggibonsi, IT) ;
GRANDI; Guido; (Segrate, IT) ; HICKEY; Erin;
(Palatine, IL) ; MASIGNANI; Vega; (Siena, IT)
; MORA; Marirosa; (Siena, IT) ; PETERSEN;
Jeremy; (Arlington, VA) ; PIZZA; Mariagrazia;
(Siena, IT) ; RAPPUOLI; Rino; (Vagliagli, IT)
; RATTI; Giulio; (Siena, IT) ; SCARLATO;
Vincenzo; (Colle Val D'Elsa, IT) ; SCARSELLI;
Maria; (Siena, IT) ; TETTELIN; Herve;
(Gaithersburg, MD) ; VENTER; J. Craig; (Potomac,
MD) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
GlaxoSmithKline Biologicals SA |
Rixensart |
|
BE |
|
|
Assignee: |
GLAXOSMITHKLINE BIOLOGICALS
SA
Rixensart
BE
|
Family ID: |
27574612 |
Appl. No.: |
14/804756 |
Filed: |
July 21, 2015 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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14450082 |
Aug 1, 2014 |
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14804756 |
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13359442 |
Jan 26, 2012 |
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14450082 |
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13070448 |
Mar 23, 2011 |
9139621 |
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13359442 |
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12013047 |
Jan 11, 2008 |
7988979 |
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13070448 |
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09674546 |
Nov 4, 2002 |
7576176 |
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PCT/US99/09346 |
Apr 30, 1999 |
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12013047 |
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60083758 |
May 1, 1998 |
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60094869 |
Jul 31, 1998 |
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60098994 |
Sep 2, 1998 |
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60099062 |
Sep 2, 1998 |
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60103749 |
Oct 9, 1998 |
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60103794 |
Oct 9, 1998 |
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60103796 |
Oct 9, 1998 |
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60121528 |
Feb 25, 1999 |
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Current U.S.
Class: |
424/190.1 ;
530/350 |
Current CPC
Class: |
Y10S 530/825 20130101;
A61P 37/04 20180101; A61K 39/095 20130101; A61K 39/00 20130101;
A61K 2039/55505 20130101; A61P 31/04 20180101; Y10S 530/806
20130101; C07K 14/22 20130101; A61P 37/02 20180101; A61K 38/00
20130101 |
International
Class: |
A61K 39/095 20060101
A61K039/095; C07K 14/22 20060101 C07K014/22 |
Claims
1. (canceled)
2. A protein comprising (i) a fragment of at least seven
consecutive amino acids from an amino acid sequence selected from
the group consisting of SEQ ID NO: 2916; SEQ ID NO: 2918, and SEQ
ID NO: 2920, or (ii) an amino acid sequence having at least 80%
identity to one of SEQ ID NO: 2916; SEQ ID NO: 2918, and SEQ ID NO:
2920.
3. The protein of claim 2 comprising the fragment, wherein the
fragment comprises at least ten consecutive amino acids from an
amino acid sequence selected from the group consisting of SEQ ID
NO: 2916; SEQ ID NO: 2918, and SEQ ID NO: 2920.
4. The protein of claim 3, wherein the fragment comprises at least
fourteen consecutive amino acids from an amino acid sequence
selected from the group consisting of SEQ ID NO: 2916; SEQ ID NO:
2918, and SEQ ID NO: 2920.
5. The protein of claim 3, wherein the fragment comprises at least
twenty consecutive amino acids from an amino acid sequence selected
from the group consisting of SEQ ID NO: 2916; SEQ ID NO: 2918, and
SEQ ID NO: 2920.
6. The protein of claim 2 comprising the amino acid sequence having
at least 80% identity to one of SEQ ID NO: 2916; SEQ ID NO: 2918,
and SEQ ID NO: 2920.
7. The protein of claim 6, wherein the amino acid sequence has at
least 85% identity to one of SEQ ID NO: 2916; SEQ ID NO: 2918, and
SEQ ID NO: 2920.
8. A composition comprising the protein of claim 2 and a
pharmaceutically acceptable excipient.
9. The composition of claim 8, further comprising an adjuvant.
10. The composition of claim 9, wherein the adjuvant is an aluminum
salt adjuvant.
11. The composition of claim 10, wherein the aluminum salt adjuvant
comprises aluminum hydroxide.
12. The composition of claim 9, wherein the protein comprises the
fragment and the fragment comprises at least ten consecutive amino
acids from an amino acid sequence selected from the group
consisting of SEQ ID NO: 2916; SEQ ID NO: 2918, and SEQ ID NO:
2920.
13. The composition of claim 12, wherein the fragment comprises at
least fourteen consecutive amino acids from an amino acid sequence
selected from the group consisting of SEQ ID NO: 2916; SEQ ID NO:
2918, and SEQ ID NO: 2920.
14. The composition of claim 12, wherein the fragment comprises at
least twenty consecutive amino acids from an amino acid sequence
selected from the group consisting of SEQ ID NO: 2916; SEQ ID NO:
2918, and SEQ ID NO: 2920.
15. The composition of claim 9, wherein the protein comprises the
amino acid sequence having at least 80% identity to one of SEQ ID
NO: 2916; SEQ ID NO: 2918, and SEQ ID NO: 2920.
16. The composition of claim 15, wherein the amino acid sequence
has at least 85% identity to one of SEQ ID NO: 2916; SEQ ID NO:
2918, and SEQ ID NO: 2920.
17. A method of inducing an immune response in a subject comprising
administering the composition of claim 9 to the subject.
Description
RELATED APPLICATIONS
[0001] This application is a Continuation of U.S. patent
application Ser. No. 14/450,082, filed Aug. 1, 2014; which is a
Continuation of U.S. patent application Ser. No. 13/359,442, filed
Jan. 26, 2012; which is a Continuation of U.S. patent application
Ser. No. 13/070,448, filed Mar. 23, 2011; which is Divisional of
U.S. patent application Ser. No. 12/013,047, filed Jan. 11, 2008,
now U.S. Pat. No. 7,988,979; which is Continuation of U.S. patent
application Ser. No. 09/674,546, which claims an international
filing date of Apr. 30, 1999, now U.S. Pat. No. 7,576,176; which is
the National Stage of International Application No. PCT/US99/09346,
filed Apr. 30, 1999; which claims the benefit under 35 U.S.C.
.sctn.119(e) of U.S. Provisional Patent Application Nos.
60/121,528, filed Feb. 25, 1999; 60/103,749, filed Oct. 9, 1998;
60/103,794, filed Oct. 9, 1998; 60/103,796, filed Oct. 9, 1998;
60/098,994, filed Sep. 2, 1998; 60/099,062, filed Sep. 2, 1998;
60/094,869, filed Jul. 31, 1998 and 60/083,758, filed May 1, 1998,
the disclosures of which are herein incorporated by reference in
their entirety.
SUBMISSION OF SEQUENCE LISTING ON ASCII TEXT FILE
[0002] The content of the following submission on ASCII text file
is incorporated herein by reference in its entirety: a computer
readable form (CRF) of the Sequence Listing (file name:
303822000405SubSeqList.txt, date recorded: Aug. 26, 2015, size:
6317 KB).
FIELD OF THE INVENTION
[0003] This invention relates to antigens from the bacterial
species: Neisseria meningitidis and Neisseria gonorrhoeae.
BACKGROUND
[0004] Neisseria meningitidis is a non-motile, gram negative
diplococcus human pathogen. It colonizes the pharynx, causing
meningitis and, occasionally, septicaemia in the absence of
meningitis. It is closely related to N. gonorrhoea, although one
feature that clearly differentiates meningococcus from gonococcus
is the presence of a polysaccharide capsule that is present in all
pathogenic meningococci.
[0005] N. meningitidis causes both endemic and epidemic disease. In
the United States the attack rate is 0.6-1 per 100,000 persons per
year, and it can be much greater during outbreaks. (see Lieberman
et al. (1996) Safety and Immunogenicity of a Serogroups A/C
Neisseria meningitidis Oligosaccharide-Protein Conjugate Vaccine in
Young Children. JAMA 275(19):1499-1503; Schuchat et al (1997)
Bacterial Meningitis in the United States in 1995. N Engl J Med
337(14):970-976). In developing countries, endemic disease rates
are much higher and during epidemics incidence rates can reach 500
cases per 100,000 persons per year. Mortality is extremely high, at
10-20% in the United States, and much higher in developing
countries. Following the introduction of the conjugate vaccine
against Haemophilus influenzae, N. meningitidis is the major cause
of bacterial meningitis at all ages in the United States (Schuchat
et al (1997) supra).
[0006] Based on the organism's capsular polysaccharide, 12
serogroups of N. meningitidis have been identified. Group A is the
pathogen most often implicated in epidemic disease in sub-Saharan
Africa. Serogroups B and C are responsible for the vast majority of
cases in the United States and in most developed countries.
Serogroups W135 and Y are responsible for the rest of the cases in
the United States and developed countries. The meningococcal
vaccine currently in use is a tetravalent polysaccharide vaccine
composed of serogroups A, C, Y and W135. Although efficacious in
adolescents and adults, it induces a poor immune response and short
duration of protection, and cannot be used in infants [eg.
Morbidity and Mortality weekly report, Vol. 46, No. RR-5 (1997)].
This is because polysaccharides are T-cell independent antigens
that induce a weak immune response that cannot be boosted by
repeated immunization. Following the success of the vaccination
against H.influenzae, conjugate vaccines against serogroups A and C
have been developed and are at the final stage of clinical testing
(Zollinger W D "New and Improved Vaccines Against Meningococcal
Disease". In: New Generation Vaccines, supra, pp. 469-488;
Lieberman et al (1996) supra; Costantino et al (1992) Development
and phase I clinical testing of a conjugate vaccine against
meningococcus A and C. Vaccine 10:691-698).
[0007] Meningococcus B (menB) remains a problem, however. This
serotype currently is responsible for approximately 50% of total
meningitis in the United States, Europe, and South America. The
polysaccharide approach cannot be used because the menB capsular
polysaccharide is a polymer of .alpha.(2-8)-linked N-acetyl
neuraminic acid that is also present in mammalian tissue. This
results in tolerance to the antigen; indeed, if an immune response
were elicited, it would be anti-self, and therefore undesirable. In
order to avoid induction of autoimmunity and to induce a protective
immune response, the capsular polysaccharide has, for instance,
been chemically modified substituting the N-acetyl groups with
N-propionyl groups, leaving the specific antigenicity unaltered
(Romero & Outschoorn (1994) Current status of Meningococcal
group B vaccine candidates: capsular or non-capsular? Clin
Microbiol Rev 7(4):559-575).
[0008] Alternative approaches to menB vaccines have used complex
mixtures of outer membrane proteins (OMPs), containing either the
OMPs alone, or OMPs enriched in porins, or deleted of the class 4
OMPs that are believed to induce antibodies that block bactericidal
activity. This approach produces vaccines that are not well
characterized. They are able to protect against the homologous
strain, but are not effective at large where there are many
antigenic variants of the outer membrane proteins. To overcome the
antigenic variability, multivalent vaccines containing up to nine
different porins have been constructed (eg. Poolman J T (1992)
Development of a meningococcal vaccine. Infect. Agents Dis.
4:13-28). Additional proteins to be used in outer membrane vaccines
have been the opa and opc proteins, but none of these approaches
have been able to overcome the antigenic variability (eg. Ala'
Aldeen & Borriello (1996) The meningococcal transferrin-binding
proteins 1 and 2 are both surface exposed and generate bactericidal
antibodies capable of killing homologous and heterologous strains.
Vaccine 14(1):49-53).
[0009] A certain amount of sequence data is available for
meningococcal and gonoccocal genes and proteins (eg. EP-A-0467714,
WO96/29412), but this is by no means complete. The provision of
further sequences could provide an opportunity to identify secreted
or surface-exposed proteins that are presumed targets for the
immune system and which are not antigenically variable. For
instance, some of the identified proteins could be components of
efficacious vaccines against meningococcus B, some could be
components of vaccines against all meningococcal serotypes, and
others could be components of vaccines against all pathogenic
Neisseriae including Neisseria meningitidis or Neisseria
gonorrhoeae. Those sequences specific to N. meningitidis or N.
gonorrhoeae that are more highly conserved are further preferred
sequences.
[0010] It is thus an object of the invention is to provide
Neisserial DNA sequences which encode proteins that are antigenic
or immunogenic.
BRIEF DESCRIPTION OF THE DRAWINGS
[0011] FIG. 1A through FIG. 1E illustrate the products of (FIG. 1B)
protein expression and (FIG. 1A) purification, (FIG. 1C) FACs
analysis, (FIG. 1D) bactericidal assay, and (FIG. 1E) western blot.
The result of the ELISA assay of the predicted ORF 919 as cloned
and expressed in E. coli was positive.
[0012] FIG. 2A through FIG. 2D illustrate the products of (FIG. 2A)
protein expression and purification, (FIG. 2B) western blot, (FIG.
2C) FACs analysis, and (FIG. 2D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 279 as cloned and expressed in
E. coli was positive.
[0013] FIG. 3A through FIG. 3D illustrate the products of (FIG. 3A)
protein expression and purification, (FIG. 3B) western blot, (FIG.
3C) FACs analysis, and (FIG. 3D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 576-1 as cloned and expressed
in E. coli was positive.
[0014] FIG. 4A through FIG. 4D illustrate the products of (FIG. 4A)
protein expression and purification, (FIG. 4B) western blot, (FIG.
4C) FACs analysis, and (FIG. 4D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 519-1 as cloned and expressed
in E. coli was positive.
[0015] FIG. 5A through FIG. 5D illustrate the products of (FIG. 5A)
protein expression and purification, (FIG. 5B) western blot, (FIG.
5C) FACs analysis, and (FIG. 5D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 121-1 as cloned and expressed
in E. coli was positive.
[0016] FIG. 6A through FIG. 6D illustrate the products of (FIG. 6A)
protein expression and purification, (FIG. 6B) western blot, (FIG.
6C) FACs analysis, and (FIG. 6D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 128-1 as cloned and expressed
in E. coli was positive.
[0017] FIG. 7A through FIG. 7D illustrate the products of (FIG. 7A)
protein expression and purification, (FIG. 7B) western blot, (FIG.
7C) FACs analysis, and (FIG. 7D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 206 as cloned and expressed in
E. coli was positive.
[0018] FIG. 8A through FIG. 8C illustrate the products of (FIG. 8A)
protein expression and purification, (FIG. 8B) FACs analysis, and
(FIG. 8C) bactericidal assay. The result of the ELISA assay of the
predicted ORF 287 as cloned and expressed in E. coli was
positive.
[0019] FIG. 9A through FIG. 9D illustrate the products of (FIG. 9A)
protein expression and purification, (FIG. 9B) western blot, (FIG.
9C) FACs analysis, and (FIG. 9D) bactericidal assay. The result of
the ELISA assay of the predicted ORF 406 as cloned and expressed in
E. coli was positive.
[0020] FIG. 10 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 919 as cloned and expressed in E. coli.
[0021] FIG. 11 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 279 as cloned and expressed in E. coli.
[0022] FIG. 12 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 576-1 as cloned and expressed in E. coli.
[0023] FIG. 13 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 519-1 as cloned and expressed in E. coli.
[0024] FIG. 14 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 121-1 as cloned and expressed in E. coli.
[0025] FIG. 15 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 128-1 as cloned and expressed in E. coli.
[0026] FIG. 16 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 206 as cloned and expressed in E. coli.
[0027] FIG. 17 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 287 as cloned and expressed in E. coli.
[0028] FIG. 18 illustrates the hydrophilicity plot, antigenic index
and AMPHI regions of the products of protein expression the
predicted ORF 406 as cloned and expressed in E. coli.
[0029] FIG. 19A, FIG. 19B, and FIG. 19C show an alignment
comparison of amino acid sequences for ORF 225 for several strains
of Neisseria. Dark shading indicates regions of homology, and gray
shading indicates the conservation of amino acids with similar
characteristics. The Figure demonstrates a high degree of
conservation among the various strains, further confirming its
utility as an antigen for both vaccines and diagnostics. The
sequences in the Figure have the following SEQ ID NOs: FA1090 SEQ
ID 3115; Z2491 SEQ ID 3116; ZO01.sub.--225 SEQ ID 3117;
ZO02.sub.--225 SEQ ID 3118; ZO03.sub.--225 SEQ ID 3119;
ZO04.sub.--225 SEQ ID 3120; ZO05225 SEQ ID 3121; ZO06.sub.--225 SEQ
ID 3122; ZO07.sub.--225 SEQ ID 3123; ZO08.sub.--225 SEQ ID 3124;
ZO09.sub.--225 SEQ ID 3125; ZO10.sub.--225 SEQ ID 3126;
ZO11.sub.--225 SEQ ID 3127; ZO12.sub.--225 SEQ ID 3128;
ZO13.sub.--225 SEQ ID 3129; ZO14.sub.--225 SEQ ID 3130;
ZO15.sub.--225<SEQ ID 3131; ZO16.sub.--225 SEQ ID 3132;
ZO17.sub.--225 SEQ ID 3133; ZO18.sub.--225 SEQ ID 3134;
ZO19.sub.--225 SEQ ID 3135; ZO20.sub.--225 SEQ ID 3136;
ZO21.sub.--225 SEQ ID 3137; ZO22.sub.--225 SEQ ID 3138;
ZO23.sub.--225 SEQ ID 3139; ZO24.sub.--225 SEQ ID 3140;
ZO25.sub.--225 SEQ ID 3141; ZO26.sub.--225 SEQ ID 3142;
ZO27.sub.--225 SEQ ID 3143; ZO28.sub.--225 SEQ ID 3144;
ZO29.sub.--225 SEQ ID 3145; ZO32.sub.--225 SEQ ID 3146;
ZO33.sub.--225 SEQ ID 3147; and ZO96.sub.--225 SEQ ID 3148.
[0030] FIG. 20A and FIG. 20B show an alignment comparison of amino
acid sequences for ORF 235 for several strains of Neisseria. Dark
shading indicates regions of homology, and gray shading indicates
the conservation of amino acids with similar characteristics. The
Figure demonstrates a high degree of conservation among the various
strains, further confirming its utility as an antigen for both
vaccines and diagnostics. The sequences in the Figure have the
following SEQ ID NOs: FA1090 SEQ ID 3149; GNMZQ01 SEQ ID 3150;
GNMZQ02 SEQ ID 3151; GNMZQ03 SEQ ID 31521; GNMZQ04 SEQ ID 3153;
GNMZQ05 SEQ ID 3154; GNMZQ07 SEQ ID 3155; GNMZQ08 SEQ ID 3156;
GNMZQ09 SEQ ID 3157; GNMZQ10 SEQ ID 3158; GNMZQ11 SEQ ID 3159;
GNMZQ13 SEQ ID 3160; GNMZQ14 SEQ ID 3161; GNMZQ15 SEQ ID 3162;
GNMZQ16 SEQ ID 3163; GNMZQ17 SEQ ID 3164; GNMZQ18 SEQ ID 3165;
GNMZQ19 SEQ ID 3166; GNMZQ21 SEQ ID 3166; GNMZQ22 SEQ ID 3167;
GNMZQ23 SEQ ID 3168; GNMZQ24 SEQ ID 3169; GNMZQ25 SEQ ID 3170;
GNMZQ26 SEQ ID 3171; GNMZQ27 SEQ ID 3172; GNMZQ28 SEQ ID 3173;
GNMZQ29 SEQ ID 3174; GNMZQ31 SEQ ID 3175; GNMZQ32 SEQ ID 3176;
GNMZQ33 SEQ ID 3177; and Z2491 SEQ ID 3178.
[0031] FIG. 21A and FIG. 21B show an alignment comparison of amino
acid sequences for ORF 287 for several strains of Neisseria. Dark
shading indicates regions of homology, and gray shading indicates
the conservation of amino acids with similar characteristics. The
Figure demonstrates a high degree of conservation among the various
strains, further confirming its utility as an antigen for both
vaccines and diagnostics. The sequences in the Figure have the
following SEQ ID NOs: 287.sub.--14 SEQ ID 3179; 287.sub.--2 SEQ ID
3180; 28721 SEQ ID 3181; 287.sub.--9 SEQ ID 3182; FA1090 SEQ ID
3183; and Z2491 SEQ ID 3184.
[0032] FIG. 22A and FIG. 22B show an alignment comparison of amino
acid sequences for ORF 519 for several strains of Neisseria. Dark
shading indicates regions of homology, and gray shading indicates
the conservation of amino acids with similar characteristics. The
Figure demonstrates a high degree of conservation among the various
strains, further confirming its utility as an antigen for both
vaccines and diagnostics. The sequences in the Figure have the
following SEQ ID NOs: FA1090.sub.--519 SEQ ID 3185; Z2491.sub.--519
SEQ ID 3186; ZV01.sub.--519 SEQ ID 3187; ZV02.sub.--519 SEQ ID
3188; ZV03.sub.--519 SEQ ID 3189; ZV04.sub.--519 SEQ ID 3190;
ZV05.sub.--519 SEQ ID 3191; ZV06.sub.--519 ASS SEQ ID 3192;
ZV07.sub.--519 SEQ ID 3193; ZV11.sub.--519 SEQ ID 3194;
ZV12.sub.--519 SEQ ID 3195; ZV18.sub.--519 SEQ ID 3196;
ZV19.sub.--519 SEQ ID 3197; ZV20.sub.--519 ASS SEQ ID 3198;
ZV21.sub.--519 ASS SEQ ID 3199; ZV22.sub.--519 ASS SEQ ID 3200;
ZV26.sub.--519 SEQ ID 3201; ZV27.sub.--519 SEQ ID 3202;
ZV28.sub.--519 SEQ ID 3203; ZV29.sub.--519 ASS SEQ ID 3204;
ZV32.sub.--519 SEQ ID 3205; and ZV96.sub.--519 SEQ ID 3206.
[0033] FIG. 23A, FIG. 23B, FIG. 23C, and FIG. 23D show an alignment
comparison of amino acid sequences for ORF 919 for several strains
of Neisseria. Dark shading indicates regions of homology, and gray
shading indicates the conservation of amino acids with similar
characteristics. The Figure demonstrates a high degree of
conservation among the various strains, further confirming its
utility as an antigen for both vaccines and diagnostics. The
sequences in the Figure have the following SEQ ID NOs: FA1090 SEQ
ID 3207; Z2491<SEQ ID 3208; ZM01 SEQ ID 3209; ZM02 SEQ ID 3210;
ZM03 SEQ ID 3211; ZM04 SEQ ID 3212; ZM05 SEQ ID 3213; ZM06 SEQ ID
3214; ZM07 SEQ ID 3215; ZM08N SEQ ID 3216; ZM09 SEQ ID 3217; ZM10
SEQ ID 3218; ZM11ASBC SEQ ID 3219; ZM12 SEQ ID 3220; ZM13 SEQ ID
3221; ZM14 SEQ ID 3222; ZM15 SEQ ID 3223; ZM16 SEQ ID 3224; ZM17
SEQ ID 3225; ZM18 SEQ ID 3226; ZM19 SEQ ID 3227; ZM20 SEQ ID 3228;
ZM21 SEQ ID 3229; ZM22 SEQ ID 3230; ZM23ASBC SEQ ID 3231; ZM24 SEQ
ID 3232; ZM25 SEQ ID 3233; ZM26 SEQ ID 3234; ZM27BC SEQ ID 3235;
ZM28 SEQ ID 3236; ZM29ASBC SEQ ID 3237; ZM31ASBC SEQ ID 3238;
ZM32ASBC SEQ ID 3239; ZM33ASBC SEQ ID 3240; ZM96 SEQ ID 3241.
THE INVENTION
[0034] The invention provides proteins comprising the N.
meningitidis amino acid sequences and N. gonorrhoeae amino acid
sequences disclosed in the examples.
[0035] It also provides proteins comprising sequences homologous
(i.e., those having sequence identity) to the N. meningitidis amino
acid sequences disclosed in the examples. Depending on the
particular sequence, the degree of homology (sequence identity) is
preferably greater than 50% (eg. 60%, 70%, 80%, 90%, 95%, 99% or
more). These proteins include mutants and allelic variants of the
sequences disclosed in the examples. Typically, 50% identity or
more between two proteins is considered to be an indication of
functional equivalence. Identity between proteins is preferably
determined by the Smith-Waterman homology search algorithm as
implemented in MPSRCH program (Oxford Molecular) using an affine
gap search with parameters:gap penalty 12, gap extension penalty
1.
[0036] The invention further provides proteins comprising fragments
of the N. meningitidis amino acid sequences and N. gonorrhoeae
amino acid sequences disclosed in the examples. The fragments
should comprise at least n consecutive amino acids from the
sequences and, depending on the particular sequence, n is 7 or more
(eg. 8, 10, 12, 14, 16, 18, 20 or more). Preferably the fragments
comprise an epitope from the sequence.
[0037] The proteins of the invention can, of course, be prepared by
various means (eg. recombinant expression, purification from cell
culture, chemical synthesis etc.) and in various forms (eg. native,
fusions etc.). They are preferably prepared in substantially pure
or isolated form (ie. substantially free from other N. meningitidis
or N. gonorrhoeae host cell proteins)
[0038] According to a further aspect, the invention provides
antibodies which bind to these proteins. These may be polyclonal or
monoclonal and may be produced by any suitable means.
[0039] According to a further aspect, the invention provides
nucleic acid comprising the N. meningitidis nucleotide sequences
and N. gonorrhoeae nucleotide sequences disclosed in the
examples.
[0040] According to a further aspect, the invention comprises
nucleic acids having sequence identity of greater than 50% (e.g.,
60%, 70%, 80%, 90%, 95%, 99% or more) to the nucleic acid sequences
herein. Sequence identity is determined as above-discussed.
[0041] According to a further aspect, the invention comprises
nucleic acid that hybridizes to the sequences provided herein.
Conditions for hybridization are set forth herein.
[0042] Nucleic acid comprising fragments of these sequences are
also provided. These should comprise at least n consecutive
nucleotides from the N. meningitidis sequences or N. gonorrhoeae
sequences and depending on the particular sequence, n is 10 or more
(eg 12, 14, 15, 18, 20, 25, 30, 35, 40 or more).
[0043] According to a further aspect, the invention provides
nucleic acid encoding the proteins and protein fragments of the
invention.
[0044] It should also be appreciated that the invention provides
nucleic acid comprising sequences complementary to those described
above (eg. for antisense or probing purposes).
[0045] Nucleic acid according to the invention can, of course, be
prepared in many ways (eg. by chemical synthesis, in part or in
whole, from genomic or cDNA libraries, from the organism itself
etc.) and can take various forms (eg. single stranded, double
stranded, vectors, probes etc.).
[0046] In addition, the term "nucleic acid" includes DNA and RNA,
and also their analogues, such as those containing modified
backbones, and also protein nucleic acids (PNA) etc.
[0047] According to a further aspect, the invention provides
vectors comprising nucleotide sequences of the invention (eg.
expression vectors) and host cells transformed with such
vectors.
[0048] According to a further aspect, the invention provides
compositions comprising protein, antibody, and/or nucleic acid
according to the invention. These compositions may be suitable as
vaccines, for instance, or as diagnostic reagents or as immunogenic
compositions.
[0049] The invention also provides nucleic acid, protein, or
antibody according to the invention for use as medicaments (eg. as
vaccines) or as diagnostic reagents. It also provides the use of
nucleic acid, protein, or antibody according to the invention in
the manufacture of (I) a medicament for treating or preventing
infection due to Neisserial bacteria (ii) a diagnostic reagent for
detecting the presence of Neis serial bacteria or of antibodies
raised against Neis serial bacteria or (iii) for raising
antibodies. Said Neisserial bacteria may be any species or strain
(such as N. gonorrhoeae) but are preferably N. meningitidis,
especially strain B or strain C.
[0050] The invention also provides a method of treating a patient,
comprising administering to the patient a therapeutically effective
amount of nucleic acid, protein, and/or antibody according to the
invention.
[0051] According to further aspects, the invention provides various
processes.
[0052] A process for producing proteins of the invention is
provided, comprising the step of culturing a host cell according to
the invention under conditions which induce protein expression.
[0053] A process for detecting polynucleotides of the invention is
provided, comprising the steps of: (a) contacting a nucleic probe
according to the invention with a biological sample under
hybridizing conditions to form duplexes; and (b) detecting said
duplexes.
[0054] A process for detecting proteins of the invention is
provided, comprising the steps of: (a) contacting an antibody
according to the invention with a biological sample under
conditions suitable for the formation of an antibody-antigen
complexes; and (b) detecting said complexes.
[0055] A summary of standard techniques and procedures which may be
employed in order to perform the invention (eg. to utilize the
disclosed sequences for vaccination or diagnostic purposes) is
attached as an Appendix to the application. This summary is not a
limitation on the invention but, rather, gives examples that may be
used, but are not required.
[0056] Having now generally described the invention, the same will
be more readily understood through reference to the following
examples which are provided by way of illustration, and are not
intended to be limiting of the present invention, unless
specified.
[0057] Methodology--Summary of Standard Procedures and
Techniques.
[0058] General This invention provides Neisseria meningitidis menB
nucleotide sequences, amino acid sequences encoded therein. With
these disclosed sequences, nucleic acid probe assays and expression
cassettes and vectors can be produced. The expression vectors can
be transformed into host cells to produce proteins. The purified or
isolated polypeptides (which may also be chemically synthesized)
can be used to produce antibodies to detect menB proteins. Also,
the host cells or extracts can be utilized for biological assays to
isolate agonists or antagonists. In addition, with these sequences
one can search to identify open reading frames and identify amino
acid sequences. The proteins may also be used in immunogenic
compositions, antigenic compositions and as vaccine components.
[0059] The practice of the present invention will employ, unless
otherwise indicated, conventional techniques of molecular biology,
microbiology, recombinant DNA, and immunology, which are within the
skill of the art. Such techniques are explained fully in the
literature e.g., Sambrook Molecular Cloning; A Laboratory Manual,
Second Edition (1989); DNA Cloning, Volumes I and ii (D. N Glover
ed. 1985); Oligonucleotide Synthesis (M. J. Gait ed, 1984); Nucleic
Acid Hybridization (B. D. Hames & S. J. Higgins eds. 1984);
Transcription and Translation (B. D. Hames & S. J. Higgins eds.
1984); Animal Cell Culture (R. I. Freshney ed. 1986); Immobilized
Cells and Enzymes (IRL Press, 1986); B. Perbal, A Practical Guide
to Molecular Cloning (1984); the Methods in Enzymology series
(Academic Press, Inc.), especially volumes 154 & 155; Gene
Transfer Vectors for Mammalian Cells (J. H. Miller and M. P. Calos
eds. 1987, Cold Spring Harbor Laboratory); Mayer and Walker, eds.
(1987), Immunochemical Methods in Cell and Molecular Biology
(Academic Press, London); Scopes, (1987) Protein Purification:
Principles and Practice, Second Edition (Springer-Verlag, N.Y.),
and Handbook of Experimental Immunology, Volumes I-IV (D. M. Weir
and C. C. Blackwell eds 1986).
[0060] Standard abbreviations for nucleotides and amino acids are
used in this specification.
[0061] All publications, patents, and patent applications cited
herein are incorporated in full by reference.
[0062] Expression Systems
[0063] The Neisseria menB nucleotide sequences can be expressed in
a variety of different expression systems; for example those used
with mammalian cells, plant cells, baculoviruses, bacteria, and
yeast.
[0064] i. Mammalian Systems
[0065] Mammalian expression systems are known in the art. A
mammalian promoter is any DNA sequence capable of binding mammalian
RNA polymerase and initiating the downstream (3') transcription of
a coding sequence (e.g., structural gene) into mRNA. A promoter
will have a transcription initiating region, which is usually
placed proximal to the 5' end of the coding sequence, and a TATA
box, usually located 25-30 base pairs (bp) upstream of the
transcription initiation site. The TATA box is thought to direct
RNA polymerase II to begin RNA synthesis at the correct site. A
mammalian promoter will also contain an upstream promoter element,
usually located within 100 to 200 bp upstream of the TATA box. An
upstream promoter element determines the rate at which
transcription is initiated and can act in either orientation
(Sambrook et al. (1989) "Expression of Cloned Genes in Mammalian
Cells." In Molecular Cloning: A Laboratory Manual, 2nd ed.).
[0066] Mammalian viral genes are often highly expressed and have a
broad host range; therefore sequences encoding mammalian viral
genes provide particularly useful promoter sequences. Examples
include the SV40 early promoter, mouse mammary tumor virus LTR
promoter, adenovirus major late promoter (Ad MLP), and herpes
simplex virus promoter. In addition, sequences derived from
non-viral genes, such as the murine metallothionein gene, also
provide useful promoter sequences. Expression may be either
constitutive or regulated (inducible). Depending on the promoter
selected, many promotes may be inducible using known substrates,
such as the use of the mouse mammary tumor virus (MMTV) promoter
with the glucocorticoid responsive element (GRE) that is induced by
glucocorticoid in hormone-responsive transformed cells (see for
example, U.S. Pat. No. 5,783,681).
[0067] The presence of an enhancer element (enhancer), combined
with the promoter elements described above, will usually increase
expression levels. An enhancer is a regulatory DNA sequence that
can stimulate transcription up to 1000-fold when linked to
homologous or heterologous promoters, with synthesis beginning at
the normal RNA start site. Enhancers are also active when they are
placed upstream or downstream from the transcription initiation
site, in either normal or flipped orientation, or at a distance of
more than 1000 nucleotides from the promoter (Maniatis et al.
(1987) Science 236:1237; Alberts et al. (1989) Molecular Biology of
the Cell, 2nd ed.). Enhancer elements derived from viruses may be
particularly useful, because they usually have a broader host
range. Examples include the SV40 early gene enhancer (Dijkema et al
(1985) EMBO J. 4:761) and the enhancer/promoters derived from the
long terminal repeat (LTR) of the Rous Sarcoma Virus (Gorman et al.
(1982b) Proc. Natl. Acad. Sci. 79:6777) and from human
cytomegalovirus (Boshart et al. (1985) Cell 41:521). Additionally,
some enhancers are regulatable and become active only in the
presence of an inducer, such as a hormone or metal ion
(Sassone-Corsi and Borelli (1986) Trends Genet. 2:215; Maniatis et
al. (1987) Science 236:1237).
[0068] A DNA molecule may be expressed intracellularly in mammalian
cells. A promoter sequence may be directly linked with the DNA
molecule, in which case the first amino acid at the N-terminus of
the recombinant protein will always be a methionine, which is
encoded by the ATG start codon. If desired, the N-terminus may be
cleaved from the protein by in vitro incubation with cyanogen
bromide.
[0069] Alternatively, foreign proteins can also be secreted from
the cell into the growth media by creating chimeric DNA molecules
that encode a fusion protein comprised of a leader sequence
fragment that provides for secretion of the foreign protein in
mammalian cells. Preferably, there are processing sites encoded
between the leader fragment and the foreign gene that can be
cleaved either in vivo or in vitro. The leader sequence fragment
usually encodes a signal peptide comprised of hydrophobic amino
acids which direct the secretion of the protein from the cell. The
adenovirus tripartite leader is an example of a leader sequence
that provides for secretion of a foreign protein in mammalian
cells.
[0070] Usually, transcription termination and polyadenylation
sequences recognized by mammalian cells are regulatory regions
located 3' to the translation stop codon and thus, together with
the promoter elements, flank the coding sequence. The 3' terminus
of the mature mRNA is formed by site-specific post-transcriptional
cleavage and polyadenylation (Birnstiel et al. (1985) Cell 41:349;
Proudfoot and Whitelaw (1988) "Termination and 3' end processing of
eukaryotic RNA. In Transcription and splicing (ed. B. D. Hames and
D. M. Glover); Proudfoot (1989) Trends Biochem. Sci. 14:105). These
sequences direct the transcription of an mRNA which can be
translated into the polypeptide encoded by the DNA. Examples of
transcription terminator/polyadenylation signals include those
derived from SV40 (Sambrook et al (1989) "Expression of cloned
genes in cultured mammalian cells." In Molecular Cloning: A
Laboratory Manual).
[0071] Usually, the above described components, comprising a
promoter, polyadenylation signal, and transcription termination
sequence are put together into expression constructs. Enhancers,
introns with functional splice donor and acceptor sites, and leader
sequences may also be included in an expression construct, if
desired. Expression constructs are often maintained in a replicon,
such as an extrachromosomal element (e.g., plasmids) capable of
stable maintenance in a host, such as mammalian cells or bacteria.
Mammalian replication systems include those derived from animal
viruses, which require trans-acting factors to replicate. For
example, plasmids containing the replication systems of
papovaviruses, such as SV40 (Gluzman (1981) Cell 23:175) or
polyomavirus, replicate to extremely high copy number in the
presence of the appropriate viral T antigen. Additional examples of
mammalian replicons include those derived from bovine
papillomavirus and Epstein-Barr virus. Additionally, the replicon
may have two replication systems, thus allowing it to be
maintained, for example, in mammalian cells for expression and in a
prokaryotic host for cloning and amplification. Examples of such
mammalian-bacteria shuttle vectors include pMT2 (Kaufman et al.
(1989) Mol. Cell. Biol. 9:946) and pHEBO (Shimizu et al. (1986)
Mol. Cell. Biol. 6:1074).
[0072] The transformation procedure used depends upon the host to
be transformed. Methods for introduction of heterologous
polynucleotides into mammalian cells are known in the art and
include dextran-mediated transfection, calcium phosphate
precipitation, polybrene mediated transfection, protoplast fusion,
electroporation, encapsulation of the polynucleotide(s) in
liposomes, and direct microinjection of the DNA into nuclei.
[0073] Mammalian cell lines available as hosts for expression are
known in the art and include many immortalized cell lines available
from the American Type Culture Collection (ATCC), including but not
limited to, Chinese hamster ovary (CHO) cells, HeLa cells, baby
hamster kidney (BHK) cells, monkey kidney cells (COS), human
hepatocellular carcinoma cells (e.g., Hep G2), and a number of
other cell lines.
[0074] ii. Plant Cellular Expression Systems
[0075] There are many plant cell culture and whole plant genetic
expression systems known in the art. Exemplary plant cellular
genetic expression systems include those described in patents, such
as: U.S. Pat. No. 5,693,506; U.S. Pat. No. 5,659,122; and U.S. Pat.
No. 5,608,143. Additional examples of genetic expression in plant
cell culture has been described by Zenk, Phytochemistry
30:3861-3863 (1991). Descriptions of plant protein signal peptides
may be found in addition to the references described above in
Vaulcombe et al., Mol. Gen. Genet. 209:33-40 (1987); Chandler et
al., Plant Molecular Biology 3:407-418 (1984); Rogers, J. Biol.
Chem. 260:3731-3738 (1985); Rothstein et al., Gene 55:353-356
(1987); Whittier et al., Nucleic Acids Research 15:2515-2535
(1987); Wirsel et al., Molecular Microbiology 3:3-14 (1989); Yu et
al., Gene 122:247-253 (1992). A description of the regulation of
plant gene expression by the phytohormone, gibberellic acid and
secreted enzymes induced by gibberellic acid can be found in R. L.
Jones and J. MacMillin, Gibberellins: in: Advanced Plant
Physiology, Malcolm B. Wilkins, ed., 1984 Pitman Publishing
Limited, London, pp. 21-52. References that describe other
metabolically-regulated genes: Sheen, Plant Cell, 2:1027-1038
(1990); Maas et al., EMBO J. 9:3447-3452 (1990); Benkel and Hickey,
Proc. Natl. Acad. Sci. 84:1337-1339 (1987)
[0076] Typically, using techniques known in the art, a desired
polynucleotide sequence is inserted into an expression cassette
comprising genetic regulatory elements designed for operation in
plants. The expression cassette is inserted into a desired
expression vector with companion sequences upstream and downstream
from the expression cassette suitable for expression in a plant
host. The companion sequences will be of plasmid or viral origin
and provide necessary characteristics to the vector to permit the
vectors to move DNA from an original cloning host, such as
bacteria, to the desired plant host. The basic bacterial/plant
vector construct will preferably provide a broad host range
prokaryote replication origin; a prokaryote selectable marker; and,
for Agrobacterium transformations, T DNA sequences for
Agrobacterium-mediated transfer to plant chromosomes. Where the
heterologous gene is not readily amenable to detection, the
construct will preferably also have a selectable marker gene
suitable for determining if a plant cell has been transformed. A
general review of suitable markers, for example for the members of
the grass family, is found in Wilmink and Dons, 1993, Plant Mol.
Biol. Reptr, 11(2):165-185.
[0077] Sequences suitable for permitting integration of the
heterologous sequence into the plant genome are also recommended.
These might include transposon sequences and the like for
homologous recombination as well as Ti sequences which permit
random insertion of a heterologous expression cassette into a plant
genome. Suitable prokaryote selectable markers include resistance
toward antibiotics such as ampicillin or tetracycline. Other DNA
sequences encoding additional functions may also be present in the
vector, as is known in the art.
[0078] The nucleic acid molecules of the subject invention may be
included into an expression cassette for expression of the
protein(s) of interest. Usually, there will be only one expression
cassette, although two or more are feasible. The recombinant
expression cassette will contain in addition to the heterologous
protein encoding sequence the following elements, a promoter
region, plant 5' untranslated sequences, initiation codon depending
upon whether or not the structural gene comes equipped with one,
and a transcription and translation termination sequence. Unique
restriction enzyme sites at the 5' and 3' ends of the cassette
allow for easy insertion into a pre-existing vector.
[0079] A heterologous coding sequence may be for any protein
relating to the present invention. The sequence encoding the
protein of interest will encode a signal peptide which allows
processing and translocation of the protein, as appropriate, and
will usually lack any sequence which might result in the binding of
the desired protein of the invention to a membrane. Since, for the
most part, the transcriptional initiation region will be for a gene
which is expressed and translocated during germination, by
employing the signal peptide which provides for translocation, one
may also provide for translocation of the protein of interest. In
this way, the protein(s) of interest will be translocated from the
cells in which they are expressed and may be efficiently harvested.
Typically secretion in seeds are across the aleurone or scutellar
epithelium layer into the endosperm of the seed. While it is not
required that the protein be secreted from the cells in which the
protein is produced, this facilitates the isolation and
purification of the recombinant protein.
[0080] Since the ultimate expression of the desired gene product
will be in a eucaryotic cell it is desirable to determine whether
any portion of the cloned gene contains sequences which will be
processed out as introns by the host's splicosome machinery. If so,
site-directed mutagenesis of the "intron" region may be conducted
to prevent losing a portion of the genetic message as a false
intron code, Reed and Maniatis, Cell 41:95-105, 1985.
[0081] The vector can be microinjected directly into plant cells by
use of micropipettes to mechanically transfer the recombinant DNA.
Crossway, Mol. Gen. Genet, 202:179-185, 1985. The genetic material
may also be transferred into the plant cell by using polyethylene
glycol, Krens, et al., Nature, 296, 72-74, 1982. Another method of
introduction of nucleic acid segments is high velocity ballistic
penetration by small particles with the nucleic acid either within
the matrix of small beads or particles, or on the surface, Klein,
et al., Nature, 327, 70-73, 1987 and Knudsen and Muller, 1991,
Planta, 185:330-336 teaching particle bombardment of barley
endosperm to create transgenic barley. Yet another method of
introduction would be fusion of protoplasts with other entities,
either minicells, cells, lysosomes or other fusible lipid-surfaced
bodies, Fraley, et al., Proc. Natl. Acad. Sci. USA, 79, 1859-1863,
1982.
[0082] The vector may also be introduced into the plant cells by
electroporation. (Fromm et al., Proc. Natl Acad. Sci. USA 82:5824,
1985). In this technique, plant protoplasts are electroporated in
the presence of plasmids containing the gene construct. Electrical
impulses of high field strength reversibly permeabilize
biomembranes allowing the introduction of the plasmids.
Electroporated plant protoplasts reform the cell wall, divide, and
form plant callus.
[0083] All plants from which protoplasts can be isolated and
cultured to give whole regenerated plants can be transformed by the
present invention so that whole plants are recovered which contain
the transferred gene. It is known that practically all plants can
be regenerated from cultured cells or tissues, including but not
limited to all major species of sugarcane, sugar beet, cotton,
fruit and other trees, legumes and vegetables. Some suitable plants
include, for example, species from the genera Fragaria, Lotus,
Medicago, Onobrychis, Trifolium, Trigonella, Vigna, Citrus, Linum,
Geranium, Manihot, Daucus, Arabidopsis, Brassica, Raphanus,
Sinapis, Atropa, Capsicum, Datura, Hyoscyamus, Lycopersion,
Nicotiana, Solanum, Petunia, Digitalis, Majorana, Cichorium,
Helianthus, Lactuca, Bromus, Asparagus, Antirrhinum, Hererocallis,
Nemesia, Pelargonium, Panicum, Pennisetum, Ranunculus, Senecio,
Salpiglossis, Cucumis, Browaalia, Glycine, Lolium, Zea, Triticum,
Sorghum, and Datura.
[0084] Means for regeneration vary from species to species of
plants, but generally a suspension of transformed protoplasts
containing copies of the heterologous gene is first provided.
Callus tissue is formed and shoots may be induced from callus and
subsequently rooted. Alternatively, embryo formation can be induced
from the protoplast suspension. These embryos germinate as natural
embryos to form plants. The culture media will generally contain
various amino acids and hormones, such as auxin and cytokinins. It
is also advantageous to add glutamic acid and proline to the
medium, especially for such species as corn and alfalfa. Shoots and
roots normally develop simultaneously. Efficient regeneration will
depend on the medium, on the genotype, and on the history of the
culture. If these three variables are controlled, then regeneration
is fully reproducible and repeatable.
[0085] In some plant cell culture systems, the desired protein of
the invention may be excreted or alternatively, the protein may be
extracted from the whole plant. Where the desired protein of the
invention is secreted into the medium, it may be collected.
Alternatively, the embryos and embryoless-half seeds or other plant
tissue may be mechanically disrupted to release any secreted
protein between cells and tissues. The mixture may be suspended in
a buffer solution to retrieve soluble proteins. Conventional
protein isolation and purification methods will be then used to
purify the recombinant protein. Parameters of time, temperature pH,
oxygen, and volumes will be adjusted through routine methods to
optimize expression and recovery of heterologous protein.
[0086] iii. Baculovirus Systems
[0087] The polynucleotide encoding the protein can also be inserted
into a suitable insect expression vector, and is operably linked to
the control elements within that vector. Vector construction
employs techniques which are known in the art. Generally, the
components of the expression system include a transfer vector,
usually a bacterial plasmid, which contains both a fragment of the
baculovirus genome, and a convenient restriction site for insertion
of the heterologous gene or genes to be expressed; a wild type
baculovirus with a sequence homologous to the baculovirus-specific
fragment in the transfer vector (this allows for the homologous
recombination of the heterologous gene in to the baculovirus
genome); and appropriate insect host cells and growth media.
[0088] After inserting the DNA sequence encoding the protein into
the transfer vector, the vector and the wild type viral genome are
transfected into an insect host cell where the vector and viral
genome are allowed to recombine. The packaged recombinant virus is
expressed and recombinant plaques are identified and purified.
Materials and methods for baculovirus/insect cell expression
systems are commercially available in kit form from, inter alia,
Invitrogen, San Diego Calif. ("MAXBAC.TM." kit). These techniques
are generally known to those skilled in the art and fully described
in Summers and Smith, Texas Agricultural Experiment Station
Bulletin No. 1555 (1987) (hereinafter "Summers and Smith").
[0089] Prior to inserting the DNA sequence encoding the protein
into the baculovirus genome, the above described components,
comprising a promoter, leader (if desired), coding sequence of
interest, and transcription termination sequence, are usually
assembled into an intermediate transplacement construct (transfer
vector). This construct may contain a single gene and operably
linked regulatory elements; multiple genes, each with its owned set
of operably linked regulatory elements; or multiple genes,
regulated by the same set of regulatory elements. Intermediate
transplacement constructs are often maintained in a replicon, such
as an extrachromosomal element (e.g., plasmids) capable of stable
maintenance in a host, such as a bacterium. The replicon will have
a replication system, thus allowing it to be maintained in a
suitable host for cloning and amplification.
[0090] Currently, the most commonly used transfer vector for
introducing foreign genes into AcNPV is pAc373. Many other vectors,
known to those of skill in the art, have also been designed. These
include, for example, pVL985 (which alters the polyhedrin start
codon from ATG to ATT, and which introduces a BamHI cloning site 32
basepairs downstream from the ATT; see Luckow and Summers, Virology
(1989) 17:31.
[0091] The plasmid usually also contains the polyhedrin
polyadenylation signal (Miller et al. (1988) Ann. Rev. Microbiol.,
42:177) and a prokaryotic ampicillin-resistance (amp) gene and
origin of replication for selection and propagation in E. coli.
[0092] Baculovirus transfer vectors usually contain a baculovirus
promoter. A baculovirus promoter is any DNA sequence capable of
binding a baculovirus RNA polymerase and initiating the downstream
(5' to 3') transcription of a coding sequence (e.g., structural
gene) into mRNA. A promoter will have a transcription initiation
region which is usually placed proximal to the 5' end of the coding
sequence. This transcription initiation region usually includes an
RNA polymerase binding site and a transcription initiation site. A
baculovirus transfer vector may also have a second domain called an
enhancer, which, if present, is usually distal to the structural
gene. Expression may be either regulated or constitutive.
[0093] Structural genes, abundantly transcribed at late times in a
viral infection cycle, provide particularly useful promoter
sequences. Examples include sequences derived from the gene
encoding the viral polyhedron protein, Friesen et al., (1986) "The
Regulation of Baculovirus Gene Expression," in: The Molecular
Biology of Baculoviruses (ed. Walter Doerfler); EPO Publ. Nos. 127
839 and 155 476; and the gene encoding the p10 protein, Vlak et
al., (1988), J. Gen. Virol. 69:765.
[0094] DNA encoding suitable signal sequences can be derived from
genes for secreted insect or baculovirus proteins, such as the
baculovirus polyhedrin gene (Carbonell et al. (1988) Gene, 73:409).
Alternatively, since the signals for mammalian cell
posttranslational modifications (such as signal peptide cleavage,
proteolytic cleavage, and phosphorylation) appear to be recognized
by insect cells, and the signals required for secretion and nuclear
accumulation also appear to be conserved between the invertebrate
cells and vertebrate cells, leaders of non-insect origin, such as
those derived from genes encoding human (alpha) .alpha.-interferon,
Maeda et al., (1985), Nature 315:592; human gastrin-releasing
peptide, Lebacq-Verheyden et al., (1988), Molec. Cell. Biol.
8:3129; human IL-2, Smith et al., (1985) Proc. Nat'l Acad. Sci.
USA, 82:8404; mouse IL-3, (Miyajima et al., (1987) Gene 58:273; and
human glucocerebrosidase, Martin et al. (1988) DNA, 7:99, can also
be used to provide for secretion in insects.
[0095] A recombinant polypeptide or polyprotein may be expressed
intracellularly or, if it is expressed with the proper regulatory
sequences, it can be secreted. Good intracellular expression of
nonfused foreign proteins usually requires heterologous genes that
ideally have a short leader sequence containing suitable
translation initiation signals preceding an ATG start signal. If
desired, methionine at the N-terminus may be cleaved from the
mature protein by in vitro incubation with cyanogen bromide.
[0096] Alternatively, recombinant polyproteins or proteins which
are not naturally secreted can be secreted from the insect cell by
creating chimeric DNA molecules that encode a fusion protein
comprised of a leader sequence fragment that provides for secretion
of the foreign protein in insects. The leader sequence fragment
usually encodes a signal peptide comprised of hydrophobic amino
acids which direct the translocation of the protein into the
endoplasmic reticulum.
[0097] After insertion of the DNA sequence and/or the gene encoding
the expression product precursor of the protein, an insect cell
host is co-transformed with the heterologous DNA of the transfer
vector and the genomic DNA of wild type baculovirus--usually by
co-transfection. The promoter and transcription termination
sequence of the construct will usually comprise a 2-5 kb section of
the baculovirus genome. Methods for introducing heterologous DNA
into the desired site in the baculovirus virus are known in the
art. (See Summers and Smith supra; Ju et al. (1987); Smith et al.,
Mol. Cell. Biol. (1983) 3:2156; and Luckow and Summers (1989)). For
example, the insertion can be into a gene such as the polyhedrin
gene, by homologous double crossover recombination; insertion can
also be into a restriction enzyme site engineered into the desired
baculovirus gene. Miller et al., (1989), Bioessays 4:91. The DNA
sequence, when cloned in place of the polyhedrin gene in the
expression vector, is flanked both 5' and 3' by polyhedrin-specific
sequences and is positioned downstream of the polyhedrin
promoter.
[0098] The newly formed baculovirus expression vector is
subsequently packaged into an infectious recombinant baculovirus.
Homologous recombination occurs at low frequency (between about 1%
and about 5%); thus, the majority of the virus produced after
cotransfection is still wild-type virus. Therefore, a method is
necessary to identify recombinant viruses. An advantage of the
expression system is a visual screen allowing recombinant viruses
to be distinguished. The polyhedrin protein, which is produced by
the native virus, is produced at very high levels in the nuclei of
infected cells at late times after viral infection. Accumulated
polyhedrin protein forms occlusion bodies that also contain
embedded particles. These occlusion bodies, up to 15 .mu.m in size,
are highly refractile, giving them a bright shiny appearance that
is readily visualized under the light microscope. Cells infected
with recombinant viruses lack occlusion bodies. To distinguish
recombinant virus from wild-type virus, the transfection
supernatant is plagued onto a monolayer of insect cells by
techniques known to those skilled in the art. Namely, the plaques
are screened under the light microscope for the presence
(indicative of wild-type virus) or absence (indicative of
recombinant virus) of occlusion bodies. Current Protocols in
Microbiology Vol. 2 (Ausubel et al. eds) at 16.8 (Supp. 10, 1990);
Summers and Smith, supra; Miller et al. (1989).
[0099] Recombinant baculovirus expression vectors have been
developed for infection into several insect cells. For example,
recombinant baculoviruses have been developed for, inter alia:
Aedes aegypti, Autographa californica, Bombyx mori, Drosophila
melanogaster, Spodoptera frugiperda, and Trichoplusia ni (PCT Pub.
No. WO 89/046699; Carbonell et al., (1985) J. Virol. 56:153; Wright
(1986) Nature 321:718; Smith et al., (1983) Mol. Cell. Biol.
3:2156; and see generally, Fraser, et al. (1989) In Vitro Cell.
Dev. Biol. 25:225).
[0100] Cells and cell culture media are commercially available for
both direct and fusion expression of heterologous polypeptides in a
baculovirus/expression system; cell culture technology is generally
known to those skilled in the art. See, e.g., Summers and Smith
supra.
[0101] The modified insect cells may then be grown in an
appropriate nutrient medium, which allows for stable maintenance of
the plasmid(s) present in the modified insect host. Where the
expression product gene is under inducible control, the host may be
grown to high density, and expression induced. Alternatively, where
expression is constitutive, the product will be continuously
expressed into the medium and the nutrient medium must be
continuously circulated, while removing the product of interest and
augmenting depleted nutrients. The product may be purified by such
techniques as chromatography, e.g., HPLC, affinity chromatography,
ion exchange chromatography, etc.; electrophoresis; density
gradient centrifugation; solvent extraction, or the like. As
appropriate, the product may be further purified, as required, so
as to remove substantially any insect proteins which are also
secreted in the medium or result from lysis of insect cells, so as
to provide a product which is at least substantially free of host
debris, e.g., proteins, lipids and polysaccharides.
[0102] In order to obtain protein expression, recombinant host
cells derived from the transformants are incubated under conditions
which allow expression of the recombinant protein encoding
sequence. These conditions will vary, dependent upon the host cell
selected. However, the conditions are readily ascertainable to
those of ordinary skill in the art, based upon what is known in the
art.
[0103] iv. Bacterial Systems
[0104] Bacterial expression techniques are known in the art. A
bacterial promoter is any DNA sequence capable of binding bacterial
RNA polymerase and initiating the downstream (3') transcription of
a coding sequence (e.g. structural gene) into mRNA. A promoter will
have a transcription initiation region which is usually placed
proximal to the 5' end of the coding sequence. This transcription
initiation region usually includes an RNA polymerase binding site
and a transcription initiation site. A bacterial promoter may also
have a second domain called an operator, that may overlap an
adjacent RNA polymerase binding site at which RNA synthesis begins.
The operator permits negative regulated (inducible) transcription,
as a gene repressor protein may bind the operator and thereby
inhibit transcription of a specific gene. Constitutive expression
may occur in the absence of negative regulatory elements, such as
the operator. In addition, positive regulation may be achieved by a
gene activator protein binding sequence, which, if present is
usually proximal (5') to the RNA polymerase binding sequence. An
example of a gene activator protein is the catabolite activator
protein (CAP), which helps initiate transcription of the lac operon
in Escherichia coli (E. coli) (Raibaud et al. (1984) Annu. Rev.
Genet. 18:173). Regulated expression may therefore be either
positive or negative, thereby either enhancing or reducing
transcription.
[0105] Sequences encoding metabolic pathway enzymes provide
particularly useful promoter sequences. Examples include promoter
sequences derived from sugar metabolizing enzymes, such as
galactose, lactose (lac) (Chang et al. (1977) Nature 198:1056), and
maltose. Additional examples include promoter sequences derived
from biosynthetic enzymes such as tryptophan (trp) (Goeddel et al.
(1980) Nuc. Acids Res. 8:4057; Yelverton et al. (1981) Nucl. Acids
Res. 9:731; U.S. Pat. No. 4,738,921; EPO Publ. Nos. 036 776 and 121
775). The beta-lactamase (bla) promoter system (Weissmann (1981)
"The cloning of interferon and other mistakes." In Interferon 3
(ed. I. Gresser)), bacteriophage lambda PL (Shimatake et al. (1981)
Nature 292:128) and T5 (U.S. Pat. No. 4,689,406) promoter systems
also provide useful promoter sequences.
[0106] In addition, synthetic promoters which do not occur in
nature also function as bacterial promoters. For example,
transcription activation sequences of one bacterial or
bacteriophage promoter may be joined with the operon sequences of
another bacterial or bacteriophage promoter, creating a synthetic
hybrid promoter (U.S. Pat. No. 4,551,433). For example, the tac
promoter is a hybrid trp-lac promoter comprised of both trp
promoter and lac operon sequences that is regulated by the lac
repressor (Amann et al. (1983) Gene 25:167; de Boer et al. (1983)
Proc. Natl. Acad. Sci. 80:21). Furthermore, a bacterial promoter
can include naturally occurring promoters of non-bacterial origin
that have the ability to bind bacterial RNA polymerase and initiate
transcription. A naturally occurring promoter of non-bacterial
origin can also be coupled with a compatible RNA polymerase to
produce high levels of expression of some genes in prokaryotes. The
bacteriophage T7 RNA polymerase/promoter system is an example of a
coupled promoter system (Studier et al. (1986) J. Mol. Biol.
189:113; Tabor et al. (1985) Proc Natl. Acad. Sci. 82:1074). In
addition, a hybrid promoter can also be comprised of a
bacteriophage promoter and an E. coli operator region (EPO Publ.
No. 267 851).
[0107] In addition to a functioning promoter sequence, an efficient
ribosome binding site is also useful for the expression of foreign
genes in prokaryotes. In E. coli, the ribosome binding site is
called the Shine-Dalgarno (SD) sequence and includes an initiation
codon (ATG) and a sequence 3-9 nucleotides in length located 3-11
nucleotides upstream of the initiation codon (Shine et al. (1975)
Nature 254:34). The SD sequence is thought to promote binding of
mRNA to the ribosome by the pairing of bases between the SD
sequence and the 3' end of E. coli 16S rRNA (Steitz et al. (1979)
"Genetic signals and nucleotide sequences in messenger RNA." In
Biological Regulation and Development: Gene Expression (ed. R. F.
Goldberger)). To express eukaryotic genes and prokaryotic genes
with weak ribosome-binding site, it is often necessary to optimize
the distance between the SD sequence and the ATG of the eukaryotic
gene (Sambrook et al. (1989) "Expression of cloned genes in
Escherichia coli." In Molecular Cloning: A Laboratory Manual).
[0108] A DNA molecule may be expressed intracellularly. A promoter
sequence may be directly linked with the DNA molecule, in which
case the first amino acid at the N-terminus will always be a
methionine, which is encoded by the ATG start codon. If desired,
methionine at the N-terminus may be cleaved from the protein by in
vitro incubation with cyanogen bromide or by either in vivo or in
vitro incubation with a bacterial methionine N-terminal peptidase
(EPO Publ. No. 219 237).
[0109] Fusion proteins provide an alternative to direct expression.
Usually, a DNA sequence encoding the N-terminal portion of an
endogenous bacterial protein, or other stable protein, is fused to
the 5' end of heterologous coding sequences. Upon expression, this
construct will provide a fusion of the two amino acid sequences.
For example, the bacteriophage lambda cell gene can be linked at
the 5' terminus of a foreign gene and expressed in bacteria. The
resulting fusion protein preferably retains a site for a processing
enzyme (factor Xa) to cleave the bacteriophage protein from the
foreign gene (Nagai et al. (1984) Nature 309:810). Fusion proteins
can also be made with sequences from the lacZ (Jia et al. (1987)
Gene 60:197), trpE (Allen et al. (1987) J. Biotechnol. 5:93; Makoff
et al. (1989) J. Gen. Microbiol. 135:11), and Chey (EPO Publ. No.
324 647) genes. The DNA sequence at the junction of the two amino
acid sequences may or may not encode a cleavable site. Another
example is a ubiquitin fusion protein. Such a fusion protein is
made with the ubiquitin region that preferably retains a site for a
processing enzyme (e.g. ubiquitin specific processing-protease) to
cleave the ubiquitin from the foreign protein. Through this method,
native foreign protein can be isolated (Miller et al. (1989)
Bio/Technology 7:698).
[0110] Alternatively, foreign proteins can also be secreted from
the cell by creating chimeric DNA molecules that encode a fusion
protein comprised of a signal peptide sequence fragment that
provides for secretion of the foreign protein in bacteria (U.S.
Pat. No. 4,336,336). The signal sequence fragment usually encodes a
signal peptide comprised of hydrophobic amino acids which direct
the secretion of the protein from the cell. The protein is either
secreted into the growth media (gram-positive bacteria) or into the
periplasmic space, located between the inner and outer membrane of
the cell (gram-negative bacteria). Preferably there are processing
sites, which can be cleaved either in vivo or in vitro encoded
between the signal peptide fragment and the foreign gene.
[0111] DNA encoding suitable signal sequences can be derived from
genes for secreted bacterial proteins, such as the E. coli outer
membrane protein gene (ompA) (Masui et al. (1983), in: Experimental
Manipulation of Gene Expression; Ghrayeb et al. (1984) EMBO J.
3:2437) and the E. coli alkaline phosphatase signal sequence (phoA)
(Oka et al. (1985) Proc. Natl. Acad. Sci. 82:7212). As an
additional example, the signal sequence of the alpha-amylase gene
from various Bacillus strains can be used to secrete heterologous
proteins from B. subtilis (Palva et al. (1982) Proc. Natl. Acad.
Sci. USA 79:5582; EPO Publ. No. 244 042).
[0112] Usually, transcription termination sequences recognized by
bacteria are regulatory regions located 3' to the translation stop
codon, and thus together with the promoter flank the coding
sequence. These sequences direct the transcription of an mRNA which
can be translated into the polypeptide encoded by the DNA.
Transcription termination sequences frequently include DNA
sequences of about 50 nucleotides capable of forming stem loop
structures that aid in terminating transcription. Examples include
transcription termination sequences derived from genes with strong
promoters, such as the trp gene in E. coli as well as other
biosynthetic genes.
[0113] Usually, the above described components, comprising a
promoter, signal sequence (if desired), coding sequence of
interest, and transcription termination sequence, are put together
into expression constructs. Expression constructs are often
maintained in a replicon, such as an extrachromosomal element
(e.g., plasmids) capable of stable maintenance in a host, such as
bacteria. The replicon will have a replication system, thus
allowing it to be maintained in a prokaryotic host either for
expression or for cloning and amplification. In addition, a
replicon may be either a high or low copy number plasmid. A high
copy number plasmid will generally have a copy number ranging from
about 5 to about 200, and usually about 10 to about 150. A host
containing a high copy number plasmid will preferably contain at
least about 10, and more preferably at least about 20 plasmids.
Either a high or low copy number vector may be selected, depending
upon the effect of the vector and the foreign protein on the
host.
[0114] Alternatively, the expression constructs can be integrated
into the bacterial genome with an integrating vector. Integrating
vectors usually contain at least one sequence homologous to the
bacterial chromosome that allows the vector to integrate.
Integrations appear to result from recombinations between
homologous DNA in the vector and the bacterial chromosome. For
example, integrating vectors constructed with DNA from various
Bacillus strains integrate into the Bacillus chromosome (EPO Publ.
No. 127 328). Integrating vectors may also be comprised of
bacteriophage or transposon sequences.
[0115] Usually, extrachromosomal and integrating expression
constructs may contain selectable markers to allow for the
selection of bacterial strains that have been transformed.
Selectable markers can be expressed in the bacterial host and may
include genes which render bacteria resistant to drugs such as
ampicillin, chloramphenicol, erythromycin, kanamycin (neomycin),
and tetracycline (Davies et al. (1978) Annu. Rev. Microbiol.
32:469). Selectable markers may also include biosynthetic genes,
such as those in the histidine, tryptophan, and leucine
biosynthetic pathways.
[0116] Alternatively, some of the above described components can be
put together in transformation vectors. Transformation vectors are
usually comprised of a selectable market that is either maintained
in a replicon or developed into an integrating vector, as described
above.
[0117] Expression and transformation vectors, either
extra-chromosomal replicons or integrating vectors, have been
developed for transformation into many bacteria. For example,
expression vectors have been developed for, inter alia, the
following bacteria: Bacillus subtilis (Palva et al. (1982) Proc.
Natl. Acad. Sci. USA 79:5582; EPO Publ. Nos. 036 259 and 063 953;
PCT Publ. No. WO 84/04541), Escherichia coli (Shimatake et al.
(1981) Nature 292:128; Amann et al. (1985) Gene 40:183; Studier et
al. (1986) J. Mol. Biol. 189:113; EPO Publ. Nos. 036 776, 136 829
and 136 907), Streptococcus cremoris (Powell et al. (1988) Appl.
Environ. Microbiol. 54:655); Streptococcus lividans (Powell et al.
(1988) Appl. Environ. Microbiol. 54:655), Streptomyces lividans
(U.S. Pat. No. 4,745,056).
[0118] Methods of introducing exogenous DNA into bacterial hosts
are well-known in the art, and usually include either the
transformation of bacteria treated with CaCl.sub.2 or other agents,
such as divalent cations and DMSO. DNA can also be introduced into
bacterial cells by electroporation. Transformation procedures
usually vary with the bacterial species to be transformed. (See
e.g., use of Bacillus: Masson et al. (1989) FEMS Microbiol. Lett.
60:273; Palva et al. (1982) Proc. Natl. Acad. Sci. USA 79:5582; EPO
Publ. Nos. 036 259 and 063 953; PCT Publ. No. WO 84/04541; use of
Campylobacter: Miller et al. (1988) Proc. Natl. Acad. Sci. 85:856;
and Wang et al. (1990) J. Bacteriol. 172:949; use of Escherichia
coli: Cohen et al. (1973) Proc. Natl. Acad. Sci. 69:2110; Dower et
al. (1988) Nucleic Acids Res. 16:6127; Kushner (1978) "An improved
method for transformation of Escherichia coli with ColE1-derived
plasmids. In Genetic Engineering: Proceedings of the International
Symposium on Genetic Engineering (eds. H. W. Boyer and S. Nicosia);
Mandel et al. (1970) J. Mol. Biol. 53:159; Taketo (1988) Biochim.
Biophys. Acta 949:318; use of Lactobacillus: Chassy et al. (1987)
FEMS Microbiol. Lett. 44:173; use of Pseudomonas: Fiedler et al.
(1988) Anal. Biochem 170:38; use of Staphylococcus: Augustin et al.
(1990) FEMS Microbiol. Lett. 66:203; use of Streptococcus: Barany
et al. (1980) J. Bacteriol. 144:698; Harlander (1987)
"Transformation of Streptococcus lactis by electroporation, in:
Streptococcal Genetics (ed. J. Ferretti and R. Curtiss III); Perry
et al. (1981) Infect. Immun. 32:1295; Powell et al. (1988) Appl.
Environ. Microbiol. 54:655; Somkuti et al. (1987) Proc. 4th Evr.
Cong. Biotechnology 1:412.
[0119] v. Yeast Expression
[0120] Yeast expression systems are also known to one of ordinary
skill in the art. A yeast promoter is any DNA sequence capable of
binding yeast RNA polymerase and initiating the downstream (3')
transcription of a coding sequence (e.g. structural gene) into
mRNA. A promoter will have a transcription initiation region which
is usually placed proximal to the 5' end of the coding sequence.
This transcription initiation region usually includes an RNA
polymerase binding site (the "TATA Box") and a transcription
initiation site. A yeast promoter may also have a second domain
called an upstream activator sequence (UAS), which, if present, is
usually distal to the structural gene. The UAS permits regulated
(inducible) expression. Constitutive expression occurs in the
absence of a UAS. Regulated expression may be either positive or
negative, thereby either enhancing or reducing transcription.
[0121] Yeast is a fermenting organism with an active metabolic
pathway, therefore sequences encoding enzymes in the metabolic
pathway provide particularly useful promoter sequences. Examples
include alcohol dehydrogenase (ADH) (EPO Publ. No. 284 044),
enolase, glucokinase, glucose-6-phosphate isomerase,
glyceraldehyde-3-phosphate-dehydrogenase (GAP or GAPDH),
hexokinase, phosphofructokinase, 3-phosphoglycerate mutase, and
pyruvate kinase (PyK) (EPO Publ. No. 329 203). The yeast PHO5 gene,
encoding acid phosphatase, also provides useful promoter sequences
(Myanohara et al. (1983) Proc. Natl. Acad. Sci. USA 80:1).
[0122] In addition, synthetic promoters which do not occur in
nature also function as yeast promoters. For example, UAS sequences
of one yeast promoter may be joined with the transcription
activation region of another yeast promoter, creating a synthetic
hybrid promoter. Examples of such hybrid promoters include the ADH
regulatory sequence linked to the GAP transcription activation
region (U.S. Pat. Nos. 4,876,197 and 4,880,734). Other examples of
hybrid promoters include promoters which consist of the regulatory
sequences of either the ADH2, GAL4, GAL10, OR PHO5 genes, combined
with the transcriptional activation region of a glycolytic enzyme
gene such as GAP or PyK (EPO Publ. No. 164 556). Furthermore, a
yeast promoter can include naturally occurring promoters of
non-yeast origin that have the ability to bind yeast RNA polymerase
and initiate transcription. Examples of such promoters include,
inter alia, (Cohen et al. (1980) Proc. Natl. Acad. Sci. USA
77:1078; Henikoff et al. (1981) Nature 283:835; Hollenberg et al.
(1981) Curr. Topics Microbiol. Immunol. 96:119; Hollenberg et al.
(1979) "The Expression of Bacterial Antibiotic Resistance Genes in
the Yeast Saccharomyces cerevisiae," in: Plasmids of Medical,
Environmental and Commercial Importance (eds. K. N. Timmis and A.
Puhler); Mercerau-Puigalon et al. (1980) Gene 11:163; Panthier et
al. (1980) Curr. Genet. 2:109;).
[0123] A DNA molecule may be expressed intracellularly in yeast. A
promoter sequence may be directly linked with the DNA molecule, in
which case the first amino acid at the N-terminus of the
recombinant protein will always be a methionine, which is encoded
by the ATG start codon. If desired, methionine at the N-terminus
may be cleaved from the protein by in vitro incubation with
cyanogen bromide.
[0124] Fusion proteins provide an alternative for yeast expression
systems, as well as in mammalian, plant, baculovirus, and bacterial
expression systems. Usually, a DNA sequence encoding the N-terminal
portion of an endogenous yeast protein, or other stable protein, is
fused to the 5' end of heterologous coding sequences. Upon
expression, this construct will provide a fusion of the two amino
acid sequences. For example, the yeast or human superoxide
dismutase (SOD) gene, can be linked at the 5' terminus of a foreign
gene and expressed in yeast. The DNA sequence at the junction of
the two amino acid sequences may or may not encode a cleavable
site. See e.g., EPO Publ. No. 196056. Another example is a
ubiquitin fusion protein. Such a fusion protein is made with the
ubiquitin region that preferably retains a site for a processing
enzyme (e.g. ubiquitin-specific processing protease) to cleave the
ubiquitin from the foreign protein. Through this method, therefore,
native foreign protein can be isolated (e.g., WO88/024066).
[0125] Alternatively, foreign proteins can also be secreted from
the cell into the growth media by creating chimeric DNA molecules
that encode a fusion protein comprised of a leader sequence
fragment that provide for secretion in yeast of the foreign
protein. Preferably, there are processing sites encoded between the
leader fragment and the foreign gene that can be cleaved either in
vivo or in vitro. The leader sequence fragment usually encodes a
signal peptide comprised of hydrophobic amino acids which direct
the secretion of the protein from the cell.
[0126] DNA encoding suitable signal sequences can be derived from
genes for secreted yeast proteins, such as the yeast invertase gene
(EPO Publ. No. 012 873; JPO Publ. No. 62:096,086) and the A-factor
gene (U.S. Pat. No. 4,588,684). Alternatively, leaders of non-yeast
origin, such as an interferon leader, exist that also provide for
secretion in yeast (EPO Publ. No. 060 057).
[0127] A preferred class of secretion leaders are those that employ
a fragment of the yeast alpha-factor gene, which contains both a
"pre" signal sequence, and a "pro" region. The types of
alpha-factor fragments that can be employed include the full-length
pre-pro alpha factor leader (about 83 amino acid residues) as well
as truncated alpha-factor leaders (usually about 25 to about 50
amino acid residues) (U.S. Pat. Nos. 4,546,083 and 4,870,008; EPO
Publ. No. 324 274). Additional leaders employing an alpha-factor
leader fragment that provides for secretion include hybrid
alpha-factor leaders made with a presequence of a first yeast, but
a pro-region from a second yeast alphafactor. (See e.g., PCT Publ.
No. WO 89/02463.)
[0128] Usually, transcription termination sequences recognized by
yeast are regulatory regions located 3' to the translation stop
codon, and thus together with the promoter flank the coding
sequence. These sequences direct the transcription of an mRNA which
can be translated into the polypeptide encoded by the DNA. Examples
of transcription terminator sequence and other yeast-recognized
termination sequences, such as those coding for glycolytic
enzymes.
[0129] Usually, the above described components, comprising a
promoter, leader (if desired), coding sequence of interest, and
transcription termination sequence, are put together into
expression constructs. Expression constructs are often maintained
in a replicon, such as an extrachromosomal element (e.g., plasmids)
capable of stable maintenance in a host, such as yeast or bacteria.
The replicon may have two replication systems, thus allowing it to
be maintained, for example, in yeast for expression and in a
prokaryotic host for cloning and amplification. Examples of such
yeast-bacteria shuttle vectors include YEp24 (Botstein et al.
(1979) Gene 8:17-24), pC1/1 (Brake et al. (1984) Proc. Natl. Acad.
Sci USA 81:4642-4646), and YRp17 (Stinchcomb et al. (1982) J. Mol.
Biol. 158:157). In addition, a replicon may be either a high or low
copy number plasmid. A high copy number plasmid will generally have
a copy number ranging from about 5 to about 200, and usually about
10 to about 150. A host containing a high copy number plasmid will
preferably have at least about 10, and more preferably at least
about 20. Enter a high or low copy number vector may be selected,
depending upon the effect of the vector and the foreign protein on
the host. See e.g., Brake et al., supra.
[0130] Alternatively, the expression constructs can be integrated
into the yeast genome with an integrating vector. Integrating
vectors usually contain at least one sequence homologous to a yeast
chromosome that allows the vector to integrate, and preferably
contain two homologous sequences flanking the expression construct.
Integrations appear to result from recombinations between
homologous DNA in the vector and the yeast chromosome (Orr-Weaver
et al. (1983) Methods in Enzymol. 101:228-245). An integrating
vector may be directed to a specific locus in yeast by selecting
the appropriate homologous sequence for inclusion in the vector.
See Orr-Weaver et al., supra. One or more expression construct may
integrate, possibly affecting levels of recombinant protein
produced (Rine et al. (1983) Proc. Natl. Acad. Sci. USA 80:6750).
The chromosomal sequences included in the vector can occur either
as a single segment in the vector, which results in the integration
of the entire vector, or two segments homologous to adjacent
segments in the chromosome and flanking the expression construct in
the vector, which can result in the stable integration of only the
expression construct.
[0131] Usually, extrachromosomal and integrating expression
constructs may contain selectable markers to allow for the
selection of yeast strains that have been transformed. Selectable
markers may include biosynthetic genes that can be expressed in the
yeast host, such as ADE2, HIS4, LEU2, TRP1, and ALG7, and the G418
resistance gene, which confer resistance in yeast cells to
tunicamycin and G418, respectively. In addition, a suitable
selectable marker may also provide yeast with the ability to grow
in the presence of toxic compounds, such as metal. For example, the
presence of CUP1 allows yeast to grow in the presence of copper
ions (Butt et al. (1987) Microbiol, Rev. 51:351).
[0132] Alternatively, some of the above described components can be
put together into transformation vectors. Transformation vectors
are usually comprised of a selectable marker that is either
maintained in a replicon or developed into an integrating vector,
as described above.
[0133] Expression and transformation vectors, either
extrachromosomal replicons or integrating vectors, have been
developed for transformation into many yeasts. For example,
expression vectors and methods of introducing exogenous DNA into
yeast hosts have been developed for, inter alia, the following
yeasts: Candida albicans (Kurtz, et al. (1986) Mol. Cell. Biol.
6:142); Candida maltosa (Kunze, et al. (1985) J. Basic Microbiol.
25:141); Hansenula polymorpha (Gleeson, et al. (1986) J. Gen.
Microbiol. 132:3459; Roggenkamp et al. (1986) Mol. Gen. Genet.
202:302); Kluyveromyces fragilis (Das, et al. (1984) J. Bacteriol.
158:1165); Kluyveromyces lactis (De Louvencourt et al. (1983) J.
Bacteriol. 154:737; Van den Berg et al. (1990) Bio/Technology
8:135); Pichia guillerimondii (Kunze et al. (1985) J. Basic
Microbiol. 25:141); Pichia pastoris (Cregg, et al. (1985) Mol.
Cell. Biol. 5:3376; U.S. Pat. Nos. 4,837,148 and 4,929,555);
Saccharomyces cerevisiae (Hinnen et al. (1978) Proc. Natl. Acad.
Sci. USA 75:1929; Ito et al. (1983) J. Bacteriol. 153:163);
Schizosaccharomyces pombe (Beach and Nurse (1981) Nature 300:706);
and Yarrowia lipolytica (Davidow, et al. (1985) Curr. Genet.
10:380471 Gaillardin, et al. (1985) Curr. Genet. 10:49).
[0134] Methods of introducing exogenous DNA into yeast hosts are
well-known in the art, and usually include either the
transformation of spheroplasts or of intact yeast cells treated
with alkali cations. Transformation procedures usually vary with
the yeast species to be transformed. See e.g., [Kurtz et al. (1986)
Mol. Cell. Biol. 6:142; Kunze et al. (1985) J. Basic Microbiol.
25:141; Candida]; [Gleeson et al. (1986) J. Gen. Microbiol.
132:3459; Roggenkamp et al. (1986) Mol. Gen. Genet. 202:302;
Hansenula]; [Das et al. (1984) J. Bacteriol. 158:1165; De
Louvencourt et al. (1983) J. Bacteriol. 154:1165; Van den Berg et
al. (1990) Bio/Technology 8:135; Kluyveromyces]; [Cregg et al.
(1985) Mol. Cell. Biol. 5:3376; Kunze et al. (1985) J. Basic
Microbiol. 25:141; U.S. Pat. Nos. 4,837,148 and 4,929,555; Pichia];
[Hinnen et al. (1978) Proc. Natl. Acad. Sci. USA 75; 1929; Ito et
al. (1983) J. Bacteriol. 153:163 Saccharomyces]; [Beach and Nurse
(1981) Nature 300:706; Schizosaccharomyces]; [Davidow et al. (1985)
Curr. Genet. 10:39; Gaillardin et al. (1985) Curr. Genet. 10:49;
Yarrowia].
DEFINITIONS
[0135] A composition containing X is "substantially free of" Y when
at least 85% by weight of the total X+Y in the composition is X.
Preferably, X comprises at least about 90% by weight of the total
of X+Y in the composition, more preferably at least about 95% or
even 99% by weight.
[0136] A "conserved" Neisseria amino acid fragment or protein is
one that is present in a particular Neisserial protein in at least
x % of Neisseria. The value of x may be 50% or more, e.g., 66%,
75%, 80%, 90%, 95% or even 100% (i.e. the amino acid is found in
the protein in question in all Neisseria). In order to determine
whether an amino acid is "conserved" in a particular Neisserial
protein, it is necessary to compare that amino acid residue in the
sequences of the protein in question from a plurality of different
Neisseria (a reference population). The reference population may
include a number of different Neisseria species or may include a
single species. The reference population may include a number of
different serogroups of a particular species or a single serogroup.
A preferred reference population consists of the 5 most common
Neisseria The term "heterologous" refers to two biological
components that are not found together in nature. The components
may be host cells, genes, or regulatory regions, such as promoters.
Although the heterologous components are not found together in
nature, they can function together, as when a promoter heterologous
to a gene is operably linked to the gene. Another example is where
a Neisserial sequence is heterologous to a mouse host cell.
[0137] An "origin of replication" is a polynucleotide sequence that
initiates and regulates replication of polynucleotides, such as an
expression vector. The origin of replication behaves as an
autonomous unit of polynucleotide replication within a cell,
capable of replication under its own control. An origin of
replication may be needed for a vector to replicate in a particular
host cell. With certain origins of replication, an expression
vector can be reproduced at a high copy number in the presence of
the appropriate proteins within the cell. Examples of origins are
the autonomously replicating sequences, which are effective in
yeast; and the viral T-antigen, effective in COS-7 cells.
[0138] A "mutant" sequence is defined as a DNA, RNA or amino acid
sequence differing from but having homology with the native or
disclosed sequence. Depending on the particular sequence, the
degree of homology (sequence identity) between the native or
disclosed sequence and the mutant sequence is preferably greater
than 50% (e.g., 60%, 70%, 80%, 90%, 95%, 99% or more) which is
calculated as described above. As used herein, an "allelic variant"
of a nucleic acid molecule, or region, for which nucleic acid
sequence is provided herein is a nucleic acid molecule, or region,
that occurs at essentially the same locus in the genome of another
or second isolate, and that, due to natural variation caused by,
for example, mutation or recombination, has a similar but not
identical nucleic acid sequence. A coding region allelic variant
typically encodes a protein having similar activity to that of the
protein encoded by the gene to which it is being compared. An
allelic variant can also comprise an alteration in the 5' or 3'
untranslated regions of the gene, such as in regulatory control
regions. (see, for example, U.S. Pat. No. 5,753,235).
[0139] Antibodies
[0140] As used herein, the term "antibody" refers to a polypeptide
or group of polypeptides composed of at least one antibody
combining site. An "antibody combining site" is the
three-dimensional binding space with an internal surface shape and
charge distribution complementary to the features of an epitope of
an antigen, which allows a binding of the antibody with the
antigen. "Antibody" includes, for example, vertebrate antibodies,
hybrid antibodies, chimeric antibodies, humanized antibodies,
altered antibodies, univalent antibodies, Fab proteins, and single
domain antibodies.
[0141] Antibodies against the proteins of the invention are useful
for affinity chromatography, immunoassays, and
distinguishing/identifying Neisseria menB proteins. Antibodies
elicited against the proteins of the present invention bind to
antigenic polypeptides or proteins or protein fragments that are
present and specifically associated with strains of Neisseria
meningitidis menB. In some instances, these antigens may be
associated with specific strains, such as those antigens specific
for the menB strains. The antibodies of the invention may be
immobilized to a matrix and utilized in an immunoassay or on an
affinity chromatography column, to enable the detection and/or
separation of polypeptides, proteins or protein fragments or cells
comprising such polypeptides, proteins or protein fragments.
Alternatively, such polypeptides, proteins or protein fragments may
be immobilized so as to detect antibodies bindably specific
thereto.
[0142] Antibodies to the proteins of the invention, both polyclonal
and monoclonal, may be prepared by conventional methods. In
general, the protein is first used to immunize a suitable animal,
preferably a mouse, rat, rabbit or goat. Rabbits and goats are
preferred for the preparation of polyclonal sera due to the volume
of serum obtainable, and the availability of labeled anti-rabbit
and anti-goat antibodies. Immunization is generally performed by
mixing or emulsifying the protein in saline, preferably in an
adjuvant such as Freund's complete adjuvant, and injecting the
mixture or emulsion parenterally (generally subcutaneously or
intramuscularly). A dose of 50-200 .mu.g/injection is typically
sufficient. Immunization is generally boosted 2-6 weeks later with
one or more injections of the protein in saline, preferably using
Freund's incomplete adjuvant. One may alternatively generate
antibodies by in vitro immunization using methods known in the art,
which for the purposes of this invention is considered equivalent
to in vivo immunization. Polyclonal antisera is obtained by
bleeding the immunized animal into a glass or plastic container,
incubating the blood at 25.degree. C. for one hour, followed by
incubating at 4.degree. C. for 2-18 hours. The serum is recovered
by centrifugation (e.g., 1,000 g for 10 minutes). About 20-50 ml
per bleed may be obtained from rabbits.
[0143] Monoclonal antibodies are prepared using the standard method
of Kohler & Milstein (Nature (1975) 256:495-96), or a
modification thereof. Typically, a mouse or rat is immunized as
described above. However, rather than bleeding the animal to
extract serum, the spleen (and optionally several large lymph
nodes) is removed and dissociated into single cells. If desired,
the spleen cells may be screened (after removal of nonspecifically
adherent cells) by applying a cell suspension to a plate or well
coated with the protein antigen. B-cells that express
membrane-bound immunoglobulin specific for the antigen bind to the
plate, and are not rinsed away with the rest of the suspension.
Resulting B-cells, or all dissociated spleen cells, are then
induced to fuse with myeloma cells to form hybridomas, and are
cultured in a selective medium (e.g., hypoxanthine, aminopterin,
thymidine medium, "HAT"). The resulting hybridomas are plated by
limiting dilution, and are assayed for the production of antibodies
which bind specifically to the immunizing antigen (and which do not
bind to unrelated antigens). The selected MAb-secreting hybridomas
are then cultured either in vitro (e.g., in tissue culture bottles
or hollow fiber reactors), or in vivo (as ascites in mice).
[0144] If desired, the antibodies (whether polyclonal or
monoclonal) may be labeled using conventional techniques. Suitable
labels include fluorophores, chromophores, radioactive atoms
(particularly .sup.32P and .sup.125I), electron-dense reagents,
enzymes, and ligands having specific binding partners. Enzymes are
typically detected by their activity. For example, horseradish
peroxidase is usually detected by its ability to convert
3,3',5,5'-tetramethylbenzidine (TMB) to a blue pigment,
quantifiable with a spectrophotometer. "Specific binding partner"
refers to a protein capable of binding a ligand molecule with high
specificity, as for example in the case of an antigen and a
monoclonal antibody specific therefor. Other specific binding
partners include biotin and avidin or streptavidin, IgG and protein
A, and the numerous receptor-ligand couples known in the art. It
should be understood that the above description is not meant to
categorize the various labels into distinct classes, as the same
label may serve in several different modes. For example, .sup.125I
may serve as a radioactive label or as an electron-dense reagent.
HRP may serve as enzyme or as antigen for a MAb. Further, one may
combine various labels for desired effect. For example, MAbs and
avidin also require labels in the practice of this invention: thus,
one might label a MAb with biotin, and detect its presence with
avidin labeled with .sup.125I, or with an anti-biotin MAb labeled
with HRP. Other permutations and possibilities will be readily
apparent to those of ordinary skill in the art, and are considered
as equivalents within the scope of the instant invention.
[0145] Antigens, immunogens, polypeptides, proteins or protein
fragments of the present invention elicit formation of specific
binding partner antibodies. These antigens, immunogens,
polypeptides, proteins or protein fragments of the present
invention comprise immunogenic compositions of the present
invention. Such immunogenic compositions may further comprise or
include adjuvants, carriers, or other compositions that promote or
enhance or stabilize the antigens, polypeptides, proteins or
protein fragments of the present invention. Such adjuvants and
carriers will be readily apparent to those of ordinary skill in the
art.
[0146] Pharmaceutical Compositions
[0147] Pharmaceutical compositions can comprise (include) either
polypeptides, antibodies, or nucleic acid of the invention. The
pharmaceutical compositions will comprise a therapeutically
effective amount of either polypeptides, antibodies, or
polynucleotides of the claimed invention.
[0148] The term "therapeutically effective amount" as used herein
refers to an amount of a therapeutic agent to treat, ameliorate, or
prevent a desired disease or condition, or to exhibit a detectable
therapeutic or preventative effect. The effect can be detected by,
for example, chemical markers or antigen levels. Therapeutic
effects also include reduction in physical symptoms, such as
decreased body temperature, when given to a patient that is
febrile. The precise effective amount for a subject will depend
upon the subject's size and health, the nature and extent of the
condition, and the therapeutics or combination of therapeutics
selected for administration. Thus, it is not useful to specify an
exact effective amount in advance. However, the effective amount
for a given situation can be determined by routine experimentation
and is within the judgment of the clinician.
[0149] For purposes of the present invention, an effective dose
will be from about 0.01 mg/kg to 50 mg/kg or 0.05 mg/kg to about 10
mg/kg of the DNA constructs in the individual to which it is
administered.
[0150] A pharmaceutical composition can also contain a
pharmaceutically acceptable carrier. The term "pharmaceutically
acceptable carrier" refers to a carrier for administration of a
therapeutic agent, such as antibodies or a polypeptide, genes, and
other therapeutic agents. The term refers to any pharmaceutical
carrier that does not itself induce the production of antibodies
harmful to the individual receiving the composition, and which may
be administered without undue toxicity. Suitable carriers may be
large, slowly metabolized macromolecules such as proteins,
polysaccharides, polylactic acids, polyglycolic acids, polymeric
amino acids, amino acid copolymers, and inactive virus particles.
Such carriers are well known to those of ordinary skill in the
art.
[0151] Pharmaceutically acceptable salts can be used therein, for
example, mineral acid salts such as hydrochlorides, hydrobromides,
phosphates, sulfates, and the like; and the salts of organic acids
such as acetates, propionates, malonates, benzoates, and the like.
A thorough discussion of pharmaceutically acceptable excipients is
available in Remington's Pharmaceutical Sciences (Mack Pub. Co.,
N.J. 1991).
[0152] Pharmaceutically acceptable carriers in therapeutic
compositions may contain liquids such as water, saline, glycerol
and ethanol. Additionally, auxiliary substances, such as wetting or
emulsifying agents, pH buffering substances, and the like, may be
present in such vehicles. Typically, the therapeutic compositions
are prepared as injectables, either as liquid solutions or
suspensions; solid forms suitable for solution in, or suspension
in, liquid vehicles prior to injection may also be prepared.
Liposomes are included within the definition of a pharmaceutically
acceptable carrier.
[0153] Delivery Methods
[0154] Once formulated, the compositions of the invention can be
administered directly to the subject. The subjects to be treated
can be animals; in particular, human subjects can be treated.
[0155] Direct delivery of the compositions will generally be
accomplished by injection, either subcutaneously,
intraperitoneally, intravenously or intramuscularly or delivered to
the interstitial space of a tissue. The compositions can also be
administered into a lesion. Other modes of administration include
oral and pulmonary administration, suppositories, and transdermal
and transcutaneous applications, needles, and gene guns or
hyposprays. Dosage treatment may be a single dose schedule or a
multiple dose schedule.
[0156] Vaccines
[0157] Vaccines according to the invention may either be
prophylactic (i.e., to prevent infection) or therapeutic (i.e., to
treat disease after infection).
[0158] Such vaccines comprise immunizing antigen(s) or
immunogen(s), immunogenic polypeptide, protein(s) or protein
fragments, or nucleic acids (e.g., ribonucleic acid or
deoxyribonucleic acid), usually in combination with
"pharmaceutically acceptable carriers," which include any carrier
that does not itself induce the production of antibodies harmful to
the individual receiving the composition. Suitable carriers are
typically large, slowly metabolized macromolecules such as
proteins, polysaccharides, polylactic acids, polyglycolic acids,
polymeric amino acids, amino acid copolymers, lipid aggregates
(such as oil droplets or liposomes), and inactive virus particles.
Such carriers are well known to those of ordinary skill in the art.
Additionally, these carriers may function as immunostimulating
agents ("adjuvants"). Furthermore, the immunogen or antigen may be
conjugated to a bacterial toxoid, such as a toxoid from diphtheria,
tetanus, cholera, H. pylori, etc. pathogens.
[0159] Preferred adjuvants to enhance effectiveness of the
composition include, but are not limited to: (1) aluminum salts
(alum), such as aluminum hydroxide, aluminum phosphate, aluminum
sulfate, etc; (2) oil-in-water emulsion formulations (with or
without other specific immunostimulating agents such as muramyl
peptides (see below) or bacterial cell wall components), such as
for example (a) MF59 (PCT Publ. No. WO 90/14837), containing 5%
Squalene, 0.5% TWEEN 80.TM., and 0.5% SPAN 85.TM. (optionally
containing various amounts of MTP-PE (see below), although not
required) formulated into submicron particles using a
microfluidizer such as Model 110Y microfluidizer (Microfluidics,
Newton, Mass.), (b) SAF, containing 10% Squalane, 0.4% Tween 80, 5%
PLURONIC.TM.-blocked polymer L121, and thr-MDP (see below) either
microfluidized into a submicron emulsion or vortexed to generate a
larger particle size emulsion, and (c) RIBI.TM. adjuvant system
(RAS), (Ribi Immunochem, Hamilton, Mont.) containing 2% Squalene,
0.2% TWEEN 80.TM., and one or more bacterial cell wall components
from the group consisting of monophosphorylipid A (MPL), trehalose
dimycolate (TDM), and cell wall skeleton (CWS), preferably MPL+CWS
(DETOX.TM.); (3) saponin adjuvants, such as STIMULON.TM. (Cambridge
Bioscience, Worcester, Mass.) may be used or particles generated
therefrom such as ISCOMs (immunostimulating complexes); (4)
Complete Freund's Adjuvant (CFA) and Incomplete Freund's Adjuvant
(IFA); (5) cytokines, such as interleukins (e.g., IL-1, IL-2, IL-4,
IL-5, IL-6, IL-7, IL-12, etc.), interferons (e.g., gamma
interferon), macrophage colony stimulating factor (M-CSF), tumor
necrosis factor (TNF), etc; and (6) other substances that act as
immunostimulating agents to enhance the effectiveness of the
composition. Alum and MF59 are preferred.
[0160] As mentioned above, muramyl peptides include, but are not
limited to, N-acetyl-muramyl-L-threonyl-D-isoglutamine (thr-MDP),
N-acetyl-normuramyl-L-alanyl-D-isoglutamine (nor-MDP),
N-acetylmuramyl-L-alanyl-D-isoglutaminyl-L-alanine-2-(1'-2'-dipalmitoyl-s-
n-glycero-3-huydroxyphosphoryloxy)-ethylamine (MTP-PE), etc.
[0161] The vaccine compositions comprising immunogenic compositions
(e.g., which may include the antigen, pharmaceutically acceptable
carrier, and adjuvant) typically will contain diluents, such as
water, saline, glycerol, ethanol, etc. Additionally, auxiliary
substances, such as wetting or emulsifying agents, pH buffering
substances, and the like, may be present in such vehicles.
Alternatively, vaccine compositions comprising immunogenic
compositions may comprise an antigen, polypeptide, protein, protein
fragment or nucleic acid in a pharmaceutically acceptable
carrier.
[0162] More specifically, vaccines comprising immunogenic
compositions comprise an immunologically effective amount of the
immunogenic polypeptides, as well as any other of the
above-mentioned components, as needed. By "immunologically
effective amount", it is meant that the administration of that
amount to an individual, either in a single dose or as part of a
series, is effective for treatment or prevention. This amount
varies depending upon the health and physical condition of the
individual to be treated, the taxonomic group of individual to be
treated (e.g., nonhuman primate, primate, etc.), the capacity of
the individual's immune system to synthesize antibodies, the degree
of protection desired, the formulation of the vaccine, the treating
doctor's assessment of the medical situation, and other relevant
factors. It is expected that the amount will fall in a relatively
broad range that can be determined through routine trials.
[0163] Typically, the vaccine compositions or immunogenic
compositions are prepared as injectables, either as liquid
solutions or suspensions; solid forms suitable for solution in, or
suspension in, liquid vehicles prior to injection may also be
prepared. The preparation also may be emulsified or encapsulated in
liposomes for enhanced adjuvant effect, as discussed above under
pharmaceutically acceptable carriers.
[0164] The immunogenic compositions are conventionally administered
parenterally, e.g., by injection, either subcutaneously or
intramuscularly. Additional formulations suitable for other modes
of administration include oral and pulmonary formulations,
suppositories, and transdermal and transcutaneous applications.
Dosage treatment may be a single dose schedule or a multiple dose
schedule. The vaccine may be administered in conjunction with other
immunoregulatory agents.
[0165] As an alternative to protein-based vaccines, DNA vaccination
may be employed (e.g., Robinson & Torres (1997) Seminars in
Immunology 9:271-283; Donnelly et al. (1997) Annu Rev Immunol
15:617-648).
[0166] Gene Delivery Vehicles
[0167] Gene therapy vehicles for delivery of constructs, including
a coding sequence of a therapeutic of the invention, to be
delivered to the mammal for expression in the mammal, can be
administered either locally or systemically. These constructs can
utilize viral or non-viral vector approaches in in vivo or ex vivo
modality. Expression of such coding sequence can be induced using
endogenous mammalian or heterologous promoters. Expression of the
coding sequence in vivo can be either constitutive or
regulated.
[0168] The invention includes gene delivery vehicles capable of
expressing the contemplated nucleic acid sequences. The gene
delivery vehicle is preferably a viral vector and, more preferably,
a retroviral, adenoviral, adeno-associated viral (AAV), herpes
viral, or alphavirus vector. The viral vector can also be an
astrovirus, coronavirus, orthomyxovirus, papovavirus,
paramyxovirus, parvovirus, picornavirus, poxvirus, or togavirus
viral vector. See generally, Jolly (1994) Cancer Gene Therapy
1:51-64; Kimura (1994) Human Gene Therapy 5:845-852; Connelly
(1995) Human Gene Therapy 6:185-193; and Kaplitt (1994) Nature
Genetics 6:148-153.
[0169] Retroviral vectors are well known in the art, including B, C
and D type retroviruses, xenotropic retroviruses (for example,
NZB-X1, NZB-X2 and NZB9-1 (see O'Neill (1985) J. Virol. 53:160)
polytropic retroviruses e.g., MCF and MCF-MLV (see Kelly (1983) J.
Virol. 45:291), spumaviruses and lentiviruses. See RNA Tumor
Viruses, Second Edition, Cold Spring Harbor Laboratory, 1985.
[0170] Portions of the retroviral gene therapy vector may be
derived from different retroviruses. For example, retrovector LTRs
may be derived from a Murine Sarcoma Virus, a tRNA binding site
from a Rous Sarcoma Virus, a packaging signal from a Murine
Leukemia Virus, and an origin of second strand synthesis from an
Avian Leukosis Virus.
[0171] These recombinant retroviral vectors may be used to generate
transduction competent retroviral vector particles by introducing
them into appropriate packaging cell lines (see U.S. Pat. No.
5,591,624). Retrovirus vectors can be constructed for site-specific
integration into host cell DNA by incorporation of a chimeric
integrase enzyme into the retroviral particle (see WO96/37626). It
is preferable that the recombinant viral vector is a replication
defective recombinant virus.
[0172] Packaging cell lines suitable for use with the
above-described retrovirus vectors are well known in the art, are
readily prepared (see WO95/30763 and WO92/05266), and can be used
to create producer cell lines (also termed vector cell lines or
"VCLs") for the production of recombinant vector particles.
Preferably, the packaging cell lines are made from human parent
cells (e.g., HT1080 cells) or mink parent cell lines, which
eliminates inactivation in human serum.
[0173] Preferred retroviruses for the construction of retroviral
gene therapy vectors include Avian Leukosis Virus, Bovine Leukemia
Virus, Murine Leukemia Virus, Mink-Cell Focus-Inducing Virus,
Murine Sarcoma Virus, Reticuloendotheliosis Virus and Rous Sarcoma
Virus. Particularly preferred Murine Leukemia Viruses include 4070A
and 1504A (Hartley and Rowe (1976) J Virol 19:19-25), Abelson (ATCC
No. VR-999), Friend (ATCC No. VR-245), Graffi, Gross (ATCC Nol
VR-590), Kirsten, Harvey Sarcoma Virus and Rauscher (ATCC No.
VR-998) and Moloney Murine Leukemia Virus (ATCC No. VR-190). Such
retroviruses may be obtained from depositories or collections such
as the American Type Culture Collection ("ATCC") or isolated from
known sources using commonly available techniques.
[0174] Exemplary known retroviral gene therapy vectors employable
in this invention include those described in patent applications
GB2200651, EP0415731, EP0345242, EP0334301, WO89/02468; WO89/05349,
WO89/09271, WO90/02806, WO90/07936, WO94/03622, WO93/25698,
WO93/25234, WO93/11230, WO93/10218, WO91/02805, WO91/02825,
WO95/07994, U.S. Pat. No. 5,219,740, U.S. Pat. No. 4,405,712, U.S.
Pat. No. 4,861,719, U.S. Pat. No. 4,980,289, U.S. Pat. No.
4,777,127, U.S. Pat. No. 5,591,624. See also Vile (1993) Cancer Res
53:3860-3864; Vile (1993) Cancer Res 53:962-967; Ram (1993) Cancer
Res 53 (1993) 83-88; Takamiya (1992) J Neurosci Res 33:493-503;
Baba (1993) J Neurosurg 79:729-735; Mann (1983) Cell 33:153; Cane
(1984) Proc Natl Acad Sci 81:6349; and Miller (1990) Human Gene
Therapy 1.
[0175] Human adenoviral gene therapy vectors are also known in the
art and employable in this invention. See, for example, Berkner
(1988) Biotechniques 6:616 and Rosenfeld (1991) Science 252:431,
and WO93/07283, WO93/06223, and WO93/07282. Exemplary known
adenoviral gene therapy vectors employable in this invention
include those described in the above referenced documents and in
WO94/12649, WO93/03769, WO93/19191, WO94/28938, WO95/11984,
WO95/00655, WO95/27071, WO95/29993, WO95/34671, WO96/05320,
WO94/08026, WO94/11506, WO93/06223, WO94/24299, WO95/14102,
WO95/24297, WO95/02697, WO94/28152, WO94/24299, WO95/09241,
WO95/25807, WO95/05835, WO94/18922 and WO95/09654. Alternatively,
administration of DNA linked to killed adenovirus as described in
Curiel (1992) Hum. Gene Ther. 3:147-154 may be employed. The gene
delivery vehicles of the invention also include adenovirus
associated virus (AAV) vectors. Leading and preferred examples of
such vectors for use in this invention are the AAV-2 based vectors
disclosed in Srivastava, WO93/09239. Most preferred AAV vectors
comprise the two AAV inverted terminal repeats in which the native
D-sequences are modified by substitution of nucleotides, such that
at least 5 native nucleotides and up to 18 native nucleotides,
preferably at least 10 native nucleotides up to 18 native
nucleotides, most preferably 10 native nucleotides are retained and
the remaining nucleotides of the D-sequence are deleted or replaced
with non-native nucleotides. The native D-sequences of the AAV
inverted terminal repeats are sequences of 20 consecutive
nucleotides in each AAV inverted terminal repeat (i.e., there is
one sequence at each end) which are not involved in HP formation.
The non-native replacement nucleotide may be any nucleotide other
than the nucleotide found in the native D-sequence in the same
position. Other employable exemplary AAV vectors are pWP-19, pWN-1,
both of which are disclosed in Nahreini (1993) Gene 124:257-262.
Another example of such an AAV vector is psub201 (see Samulski
(1987) J. Virol. 61:3096). Another exemplary AAV vector is the
Double-D ITR vector. Construction of the Double-D ITR vector is
disclosed in U.S. Pat. No. 5,478,745. Still other vectors are those
disclosed in Carter U.S. Pat. No. 4,797,368 and Muzyczka U.S. Pat.
No. 5,139,941, Chartejee U.S. Pat. No. 5,474,935, and Kotin
WO94/288157. Yet a further example of an AAV vector employable in
this invention is SSV9AFABTKneo, which contains the AFP enhancer
and albumin promoter and directs expression predominantly in the
liver. Its structure and construction are disclosed in Su (1996)
Human Gene Therapy 7:463-470. Additional AAV gene therapy vectors
are described in U.S. Pat. No. 5,354,678, U.S. Pat. No. 5,173,414,
U.S. Pat. No. 5,139,941, and U.S. Pat. No. 5,252,479.
[0176] The gene therapy vectors comprising sequences of the
invention also include herpes vectors. Leading and preferred
examples are herpes simplex virus vectors containing a sequence
encoding a thymidine kinase polypeptide such as those disclosed in
U.S. Pat. No. 5,288,641 and EP0176170 (Roizman). Additional
exemplary herpes simplex virus vectors include HFEM/ICP6-LacZ
disclosed in WO95/04139 (Wistar Institute), pHSVlac described in
Geller (1988) Science 241:1667-1669 and in WO90/09441 and
WO92/07945, HSV Us3:pgC-lacZ described in Fink (1992) Human Gene
Therapy 3:11-19 and HSV 7134, 2 RH 105 and GAL4 described in EP
0453242 (Breakefield), and those deposited with the ATCC as
accession numbers ATCC VR-977 and ATCC VR-260.
[0177] Also contemplated are alpha virus gene therapy vectors that
can be employed in this invention. Preferred alpha virus vectors
are Sindbis viruses vectors. Togaviruses, Semliki Forest virus
(ATCC VR-67; ATCC VR-1247), Middleberg virus (ATCC VR-370), Ross
River virus (ATCC VR-373; ATCC VR-1246), Venezuelan equine
encephalitis virus (ATCC VR923; ATCC VR-1250; ATCC VR-1249; ATCC
VR-532), and those described in U.S. Pat. Nos. 5,091,309,
5,217,879, and WO92/10578. More particularly, those alpha virus
vectors described in U.S. Ser. No. 08/405,627, filed Mar. 15, 1995,
WO94/21792, WO92/10578, WO95/07994, U.S. Pat. No. 5,091,309 and
U.S. Pat. No. 5,217,879 are employable. Such alpha viruses may be
obtained from depositories or collections such as the ATCC or
isolated from known sources using commonly available techniques.
Preferably, alphavirus vectors with reduced cytotoxicity are used
(see U.S. Ser. No. 08/679,640).
[0178] DNA vector systems such as eukarytic layered expression
systems are also useful for expressing the nucleic acids of the
invention. See WO95/07994 for a detailed description of eukaryotic
layered expression systems. Preferably, the eukaryotic layered
expression systems of the invention are derived from alphavirus
vectors and most preferably from Sindbis viral vectors.
[0179] Other viral vectors suitable for use in the present
invention include those derived from poliovirus, for example ATCC
VR-58 and those described in Evans, Nature 339 (1989) 385 and Sabin
(1973) J. Biol. Standardization 1:115; rhinovirus, for example ATCC
VR-1110 and those described in Arnold (1990) J Cell Biochem L401;
pox viruses such as canary pox virus or vaccinia virus, for example
ATCC VR-111 and ATCC VR-2010 and those described in Fisher-Hoch
(1989) Proc Natl Acad Sci 86:317; Flexner (1989) Ann NY Acad Sci
569:86, Flexner (1990) Vaccine 8:17; in U.S. Pat. No. 4,603,112 and
U.S. Pat. No. 4,769,330 and WO89/01973; SV40 virus, for example
ATCC VR-305 and those described in Mulligan (1979) Nature 277:108
and Madzak (1992) J Gen Virol 73:1533; influenza virus, for example
ATCC VR-797 and recombinant influenza viruses made employing
reverse genetics techniques as described in U.S. Pat. No. 5,166,057
and in Enami (1990) Proc Natl Acad Sci 87:3802-3805; Enami &
Palese (1991) J Virol 65:2711-2713 and Luytjes (1989) Cell 59:110,
(see also McMichael (1983) NEJ Med 309:13, and Yap (1978) Nature
273:238 and Nature (1979) 277:108); human immunodeficiency virus as
described in EP-0386882 and in Buchschacher (1992) J. Virol.
66:2731; measles virus, for example ATCC VR-67 and VR-1247 and
those described in EP-0440219; Aura virus, for example ATCC VR-368;
Bebaru virus, for example ATCC VR-600 and ATCC VR-1240; Cabassou
virus, for example ATCC VR-922; Chikungunya virus, for example ATCC
VR-64 and ATCC VR-1241; Fort Morgan Virus, for example ATCC VR-924;
Getah virus, for example ATCC VR-369 and ATCC VR-1243; Kyzylagach
virus, for example ATCC VR-927; Mayaro virus, for example ATCC
VR-66; Mucambo virus, for example ATCC VR-580 and ATCC VR-1244;
Ndumu virus, for example ATCC VR-371; Pixuna virus, for example
ATCC VR-372 and ATCC VR-1245; Tonate virus, for example ATCC
VR-925; Triniti virus, for example ATCC VR-469; Una virus, for
example ATCC VR-374; Whataroa virus, for example ATCC VR-926;
Y-62-33 virus, for example ATCC VR-375; O'Nyong virus, Eastern
encephalitis virus, for example ATCC VR-65 and ATCC VR-1242;
Western encephalitis virus, for example ATCC VR-70, ATCC VR-1251,
ATCC VR-622 and ATCC VR-1252; and coronavirus, for example ATCC
VR-740 and those described in Hamre (1966) Proc Soc Exp Biol Med
121:190.
[0180] Delivery of the compositions of this invention into cells is
not limited to the above mentioned viral vectors. Other delivery
methods and media may be employed such as, for example, nucleic
acid expression vectors, polycationic condensed DNA linked or
unlinked to killed adenovirus alone, for example see U.S. Ser. No.
08/366,787, filed Dec. 30, 1994 and Curiel (1992) Hum Gene Ther
3:147-154 ligand linked DNA, for example see Wu (1989) J Biol Chem
264:16985-16987, eucaryotic cell delivery vehicles cells, for
example see U.S. Ser. No. 08/240,030, filed May 9, 1994, and U.S.
Ser. No. 08/404,796, deposition of photopolymerized hydrogel
materials, hand-held gene transfer particle gun, as described in
U.S. Pat. No. 5,149,655, ionizing radiation as described in U.S.
Pat. No. 5,206,152 and in WO92/11033, nucleic charge neutralization
or fusion with cell membranes. Additional approaches are described
in Philip (1994) Mol Cell Biol 14:2411-2418 and in Woffendin (1994)
Proc Natl Acad Sci 91:1581-1585.
[0181] Particle mediated gene transfer may be employed, for example
see U.S. Ser. No. 60/023,867. Briefly, the sequence can be inserted
into conventional vectors that contain conventional control
sequences for high level expression, and then incubated with
synthetic gene transfer molecules such as polymeric DNA-binding
cations like polylysine, protamine, and albumin, linked to cell
targeting ligands such as asialoorosomucoid, as described in Wu
& Wu (1987) J. Biol. Chem. 262:4429-4432, insulin as described
in Hucked (1990) Biochem Pharmacol 40:253-263, galactose as
described in Plank (1992) Bioconjugate Chem 3:533-539, lactose or
transferrin.
[0182] Naked DNA may also be employed to transform a host cell.
Exemplary naked DNA introduction methods are described in WO
90/11092 and U.S. Pat. No. 5,580,859. Uptake efficiency may be
improved using biodegradable latex beads. DNA coated latex beads
are efficiently transported into cells after endocytosis initiation
by the beads. The method may be improved further by treatment of
the beads to increase hydrophobicity and thereby facilitate
disruption of the endosome and release of the DNA into the
cytoplasm.
[0183] Liposomes that can act as gene delivery vehicles are
described in U.S. Pat. No. 5,422,120, WO95/13796, WO94/23697,
WO91/14445 and EP-524,968. As described in U.S. Ser. No.
60/023,867, on non-viral delivery, the nucleic acid sequences
encoding a polypeptide can be inserted into conventional vectors
that contain conventional control sequences for high level
expression, and then be incubated with synthetic gene transfer
molecules such as polymeric DNA-binding cations like polylysine,
protamine, and albumin, linked to cell targeting ligands such as
asialoorosomucoid, insulin, galactose, lactose, or transferrin.
Other delivery systems include the use of liposomes to encapsulate
DNA comprising the gene under the control of a variety of
tissue-specific or ubiquitously-active promoters. Further non-viral
delivery suitable for use includes mechanical delivery systems such
as the approach described in Woffendin et al (1994) Proc. Natl.
Acad. Sci. USA 91(24):11581-11585. Moreover, the coding sequence
and the product of expression of such can be delivered through
deposition of photopolymerized hydrogel materials. Other
conventional methods for gene delivery that can be used for
delivery of the coding sequence include, for example, use of
hand-held gene transfer particle gun, as described in U.S. Pat. No.
5,149,655; use of ionizing radiation for activating transferred
gene, as described in U.S. Pat. No. 5,206,152 and WO92/11033.
[0184] Exemplary liposome and polycationic gene delivery vehicles
are those described in U.S. Pat. Nos. 5,422,120 and 4,762,915; in
WO 95/13796; WO94/23697; and WO91/14445; in EP-0524968; and in
Stryer, Biochemistry, pages 236-240 (1975) W.H. Freeman, San
Francisco; Szoka (1980) Biochem Biophys Acta 600:1; Bayer (1979)
Biochem Biophys Acta 550:464; Rivnay (1987) Meth Enzymol 149:119;
Wang (1987) Proc Natl Acad Sci 84:7851; Plant (1989) Anal Biochem
176:420.
[0185] A polynucleotide composition can comprises therapeutically
effective amount of a gene therapy vehicle, as the term is defined
above. For purposes of the present invention, an effective dose
will be from about 0.01 mg/kg to 50 mg/kg or 0.05 mg/kg to about 10
mg/kg of the DNA constructs in the individual to which it is
administered.
Delivery Methods
[0186] Once formulated, the polynucleotide compositions of the
invention can be administered (1) directly to the subject; (2)
delivered ex vivo, to cells derived from the subject; or (3) in
vitro for expression of recombinant proteins. The subjects to be
treated can be mammals or birds. Also, human subjects can be
treated.
[0187] Direct delivery of the compositions will generally be
accomplished by injection, either subcutaneously,
intraperitoneally, intravenously or intramuscularly or delivered to
the interstitial space of a tissue. The compositions can also be
administered into a tumor or lesion. Other modes of administration
include oral and pulmonary administration, suppositories, and
transdermal applications, needles, and gene guns or hyposprays.
Dosage treatment may be a single dose schedule or a multiple dose
schedule.
[0188] Methods for the ex vivo delivery and reimplantation of
transformed cells into a subject are known in the art and described
in eg. WO93/14778. Examples of cells useful in ex vivo applications
include, for example, stem cells, particularly hematopoetic, lymph
cells, macrophages, dendritic cells, or tumor cells.
[0189] Generally, delivery of nucleic acids for both ex vivo and in
vitro applications can be accomplished by the following procedures,
for example, dextran-mediated transfection, calcium phosphate
precipitation, polybrene mediated transfection, protoplast fusion,
electroporation, encapsulation of the polynucleotide(s) in
liposomes, and direct microinjection of the DNA into nuclei, all
well known in the art.
Polynucleotide and Polypeptide Pharmaceutical Compositions
[0190] In addition to the pharmaceutically acceptable carriers and
salts described above, the following additional agents can be used
with polynucleotide and/or polypeptide compositions.
A. Polypeptides
[0191] One example are polypeptides which include, without
limitation: asioloorosomucoid (ASOR); transferrin;
asialoglycoproteins; antibodies; antibody fragments; ferritin;
interleukins; interferons, granulocyte, macrophage colony
stimulating factor (GM-CSF), granulocyte colony stimulating factor
(G-CSF), macrophage colony stimulating factor (M-CSF), stem cell
factor and erythropoietin. Viral antigens, such as envelope
proteins, can also be used. Also, proteins from other invasive
organisms, such as the 17 amino acid peptide from the
circumsporozoite protein of plasmodium falciparum known as RII.
B. Hormones, Vitamins, Etc.
[0192] Other groups that can be included are, for example:
hormones, steroids, androgens, estrogens, thyroid hormone, or
vitamins, folic acid.
C. Polyalkylenes, Polysaccharides, Etc.
[0193] Also, polyalkylene glycol can be included with the desired
polynucleotides or polypeptides. In a preferred embodiment, the
polyalkylene glycol is polyethlylene glycol. In addition, mono-,
di-, or polysaccarides can be included. In a preferred embodiment
of this aspect, the polysaccharide is dextran or DEAE-dextran.
Also, chitosan and poly(lactide-co-glycolide)
D. Lipids, and Liposomes
[0194] The desired polynucleotide or polypeptide can also be
encapsulated in lipids or packaged in liposomes prior to delivery
to the subject or to cells derived therefrom.
[0195] Lipid encapsulation is generally accomplished using
liposomes which are able to stably bind or entrap and retain
nucleic acid. The ratio of condensed polynucleotide or polypeptide
to lipid preparation can vary but will generally be around 1:1 (mg
DNA:micromoles lipid), or more of lipid. For a review of the use of
liposomes as carriers for delivery of nucleic acids, see, Hug and
Sleight (1991) Biochim. Biophys. Acta. 1097:1-17; Straubinger
(1983) Meth. Enzymol. 101:512-527.
[0196] Liposomal preparations for use in the present invention
include cationic (positively charged), anionic (negatively charged)
and neutral preparations. Cationic liposomes have been shown to
mediate intracellular delivery of plasmid DNA (Felgner (1987) Proc.
Natl. Acad. Sci. USA 84:7413-7416); mRNA (Malone (1989) Proc. Natl.
Acad. Sci. USA 86:6077-6081); and purified transcription factors
(Debs (1990) J. Biol. Chem. 265:10189-10192), in functional
form.
[0197] Cationic liposomes are readily available. For example,
N[1-2,3-dioleyloxy)propyl]-N,N,N-triethylammonium (DOTMA) liposomes
are available under the trademark Lipofectin, from GIBCO BRL, Grand
Island, N.Y. (See, also, Felgner supra). Other commercially
available liposomes include transfectace (DDAB/DOPE) and DOTAP/DOPE
(Boerhinger). Other cationic liposomes can be prepared from readily
available materials using techniques well known in the art. See,
eg. Szoka (1978) Proc. Natl. Acad. Sci. USA 75:4194-4198;
WO90/11092 for a description of the synthesis of DOTAP
(1,2-bis(oleoyloxy)-3-(trimethylammonio)propane) liposomes.
[0198] Similarly, anionic and neutral liposomes are readily
available, such as from Avanti Polar Lipids (Birmingham, Ala.), or
can be easily prepared using readily available materials. Such
materials include phosphatidyl choline, cholesterol, phosphatidyl
ethanolamine, dioleoylphosphatidyl choline (DOPC),
dioleoylphosphatidyl glycerol (DOPG), dioleoylphoshatidyl
ethanolamine (DOPE), among others. These materials can also be
mixed with the DOTMA and DOTAP starting materials in appropriate
ratios. Methods for making liposomes using these materials are well
known in the art.
[0199] The liposomes can comprise multilammelar vesicles (MLVs),
small unilamellar vesicles (SUVs), or large unilamellar vesicles
(LUVs). The various liposome-nucleic acid complexes are prepared
using methods known in the art. See eg. Straubinger (1983) Meth.
Immunol. 101:512-527; Szoka (1978) Proc. Natl. Acad. Sci. USA
75:4194-4198; Papahadjopoulos (1975) Biochim. Biophys. Acta
394:483; Wilson (1979) Cell 17:77); Deamer & Bangham (1976)
Biochim. Biophys. Acta 443:629; Ostro (1977) Biochem. Biophys. Res.
Commun. 76:836; Fraley (1979) Proc. Natl. Acad. Sci. USA 76:3348);
Enoch & Strittmatter (1979) Proc. Natl. Acad. Sci. USA 76:145;
Fraley (1980) J. Biol. Chem. (1980) 255:10431; Szoka &
Papahadjopoulos (1978) Proc. Natl. Acad. Sci. USA 75:145; and
Schaefer-Ridder (1982) Science 215:166.
E. Lipoproteins
[0200] In addition, lipoproteins can be included with the
polynucleotide or polypeptide to be delivered. Examples of
lipoproteins to be utilized include: chylomicrons, HDL, IDL, LDL,
and VLDL. Mutants, fragments, or fusions of these proteins can also
be used. Also, modifications of naturally occurring lipoproteins
can be used, such as acetylated LDL. These lipoproteins can target
the delivery of polynucleotides to cells expressing lipoprotein
receptors. Preferably, if lipoproteins are including with the
polynucleotide to be delivered, no other targeting ligand is
included in the composition.
[0201] Naturally occurring lipoproteins comprise a lipid and a
protein portion. The protein portion are known as apoproteins. At
the present, apoproteins A, B, C, D, and E have been isolated and
identified. At least two of these contain several proteins,
designated by Roman numerals, AI, AII, AIV; CI, CII, CIII.
[0202] A lipoprotein can comprise more than one apoprotein. For
example, naturally occurring chylomicrons comprises of A, B, C, and
E, over time these lipoproteins lose A and acquire C and E
apoproteins. VLDL comprises A, B, C, and E apoproteins, LDL
comprises apoprotein B; and HDL comprises apoproteins A, C, and
E.
[0203] The amino acid of these apoproteins are known and are
described in, for example, Breslow (1985) Annu Rev. Biochem 54:699;
Law (1986) Adv. Exp Med. Biol. 151:162; Chen (1986) J Biol Chem
261:12918; Kane (1980) Proc Natl Acad Sci USA 77:2465; and Utermann
(1984) Hum Genet 65:232.
[0204] Lipoproteins contain a variety of lipids including,
triglycerides, cholesterol (free and esters), and phopholipids. The
composition of the lipids varies in naturally occurring
lipoproteins. For example, chylomicrons comprise mainly
triglycerides. A more detailed description of the lipid content of
naturally occurring lipoproteins can be found, for example, in
Meth. Enzymol. 128 (1986). The composition of the lipids are chosen
to aid in conformation of the apoprotein for receptor binding
activity. The composition of lipids can also be chosen to
facilitate hydrophobic interaction and association with the
polynucleotide binding molecule.
[0205] Naturally occurring lipoproteins can be isolated from serum
by ultracentrifugation, for instance. Such methods are described in
Meth. Enzymol. (supra); Pitas (1980) J. Biochem. 255:5454-5460 and
Mahey (1979) J Clin. Invest 64:743-750.
[0206] Lipoproteins can also be produced by in vitro or recombinant
methods by expression of the apoprotein genes in a desired host
cell. See, for example, Atkinson (1986) Annu Rev Biophys Chem
15:403 and Radding (1958) Biochim Biophys Acta 30: 443.
[0207] Lipoproteins can also be purchased from commercial
suppliers, such as Biomedical Techniologies, Inc., Stoughton,
Mass., USA.
[0208] Further description of lipoproteins can be found in
Zuckermann et al., PCT. Appin. No. US97/14465.
F. Polycationic Agents
[0209] Polycationic agents can be included, with or without
lipoprotein, in a composition with the desired polynucleotide or
polypeptide to be delivered.
[0210] Polycationic agents, typically, exhibit a net positive
charge at physiological relevant pH and are capable of neutralizing
the electrical charge of nucleic acids to facilitate delivery to a
desired location. These agents have both in vitro, ex vivo, and in
vivo applications. Polycationic agents can be used to deliver
nucleic acids to a living subject either intramuscularly,
subcutaneously, etc.
[0211] The following are examples of useful polypeptides as
polycationic agents: polylysine, polyarginine, polyornithine, and
protamine. Other examples include histones, protamines, human serum
albumin, DNA binding proteins, non-histone chromosomal proteins,
coat proteins from DNA viruses, such as (X174, transcriptional
factors also contain domains that bind DNA and therefore may be
useful as nucleic aid condensing agents. Briefly, transcriptional
factors such as C/CEBP, c-jun, c-fos, AP-1, AP-2, AP-3, CPF,
Prot-1, Sp-1, Oct-1, Oct-2, CREP, and TFIID contain basic domains
that bind DNA sequences.
[0212] Organic polycationic agents include: spermine, spermidine,
and purtrescine.
[0213] The dimensions and of the physical properties of a
polycationic agent can be extrapolated from the list above, to
construct other polypeptide polycationic agents or to produce
synthetic polycationic agents.
[0214] Synthetic Polycationic Agents
[0215] Synthetic polycationic agents which are useful include, for
example, DEAE-dextran, polybrene. LIPOFECTIN.TM., and
LIPOFECTAMINE.TM. are monomers that form polycationic complexes
when combined with polynucleotides or polypeptides.
Immunodiagnostic Assays
[0216] Neis serial antigens of the invention can be used in
immunoassays to detect antibody levels (or, conversely,
anti-Neisserial antibodies can be used to detect antigen levels).
Immunoassays based on well defined, recombinant antigens can be
developed to replace invasive diagnostics methods. Antibodies to
Neis serial proteins within biological samples, including for
example, blood or serum samples, can be detected. Design of the
immunoassays is subject to a great deal of variation, and a variety
of these are known in the art. Protocols for the immunoassay may be
based, for example, upon competition, or direct reaction, or
sandwich type assays. Protocols may also, for example, use solid
supports, or may be by immunoprecipitation. Most assays involve the
use of labeled antibody or polypeptide; the labels may be, for
example, fluorescent, chemiluminescent, radioactive, or dye
molecules. Assays which amplify the signals from the probe are also
known; examples of which are assays which utilize biotin and
avidin, and enzyme-labeled and mediated immunoassays, such as ELISA
assays.
[0217] Kits suitable for immunodiagnosis and containing the
appropriate labeled reagents are constructed by packaging the
appropriate materials, including the compositions of the invention,
in suitable containers, along with the remaining reagents and
materials (for example, suitable buffers, salt solutions, etc.)
required for the conduct of the assay, as well as suitable set of
assay instructions.
Nucleic Acid Hybridisation
[0218] "Hybridization" refers to the association of two nucleic
acid sequences to one another by hydrogen bonding. Typically, one
sequence will be fixed to a solid support and the other will be
free in solution. Then, the two sequences will be placed in contact
with one another under conditions that favor hydrogen bonding.
Factors that affect this bonding include: the type and volume of
solvent; reaction temperature; time of hybridization; agitation;
agents to block the non-specific attachment of the liquid phase
sequence to the solid support (Denhardt's reagent or BLOTTO);
concentration of the sequences; use of compounds to increase the
rate of association of sequences (dextran sulfate or polyethylene
glycol); and the stringency of the washing conditions following
hybridization. See Sambrook et al. [supra] Volume 2, chapter 9,
pages 9.47 to 9.57.
[0219] "Stringency" refers to conditions in a hybridization
reaction that favor association of very similar sequences over
sequences that differ. For example, the combination of temperature
and salt concentration should be chosen that is approximately 120
to 200.degree. C. below the calculated Tm of the hybrid under
study. The temperature and salt conditions can often be determined
empirically in preliminary experiments in which samples of genomic
DNA immobilized on filters are hybridized to the sequence of
interest and then washed under conditions of different
stringencies. See Sambrook et al. at page 9.50.
[0220] Variables to consider when performing, for example, a
Southern blot are (1) the complexity of the DNA being blotted and
(2) the homology between the probe and the sequences being
detected. The total amount of the fragment(s) to be studied can
vary a magnitude of 10, from 0.1 to 1 .mu.g for a plasmid or phage
digest to 10.sup.-9 to 10.sup.-8 g for a single copy gene in a
highly complex eukaryotic genome. For lower complexity
polynucleotides, substantially shorter blotting, hybridization, and
exposure times, a smaller amount of starting polynucleotides, and
lower specific activity of probes can be used. For example, a
single-copy yeast gene can be detected with an exposure time of
only 1 hour starting with 1 .mu.g of yeast DNA, blotting for two
hours, and hybridizing for 4-8 hours with a probe of 10.sup.8
cpm/.mu.g. For a single-copy mammalian gene a conservative approach
would start with 10 .mu.g of DNA, blot overnight, and hybridize
overnight in the presence of 10% dextran sulfate using a probe of
greater than 10.sup.8 cpm/.mu.g, resulting in an exposure time of
-24 hours.
[0221] Several factors can affect the melting temperature (Tm) of a
DNA-DNA hybrid between the probe and the fragment of interest, and
consequently, the appropriate conditions for hybridization and
washing. In many cases the probe is not 100% homologous to the
fragment. Other commonly encountered variables include the length
and total G+C content of the hybridizing sequences and the ionic
strength and formamide content of the hybridization buffer. The
effects of all of these factors can be approximated by a single
equation:
Tm=81+16.6(log.sub.10Ci)+0.4[%(G+C)]-0.6(% formamide)-600/n-1.5(%
mismatch).
[0222] where Ci is the salt concentration (monovalent ions) and n
is the length of the hybrid in base pairs (slightly modified from
Meinkoth & Wahl (1984) Anal. Biochem. 138: 267-284).
[0223] In designing a hybridization experiment, some factors
affecting nucleic acid hybridization can be conveniently altered.
The temperature of the hybridization and washes and the salt
concentration during the washes are the simplest to adjust. As the
temperature of the hybridization increases (ie. stringency), it
becomes less likely for hybridization to occur between strands that
are nonhomologous, and as a result, background decreases. If the
radiolabeled probe is not completely homologous with the
immobilized fragment (as is frequently the case in gene family and
interspecies hybridization experiments), the hybridization
temperature must be reduced, and background will increase. The
temperature of the washes affects the intensity of the hybridizing
band and the degree of background in a similar manner. The
stringency of the washes is also increased with decreasing salt
concentrations.
[0224] In general, convenient hybridization temperatures in the
presence of 50% formamide are 42.degree. C. for a probe with is 95%
to 100% homologous to the target fragment, 37.degree. C. for 90% to
95% homology, and 32.degree. C. for 85% to 90% homology. For lower
homologies, formamide content should be lowered and temperature
adjusted accordingly, using the equation above. If the homology
between the probe and the target fragment are not known, the
simplest approach is to start with both hybridization and wash
conditions which are nonstringent. If non-specific bands or high
background are observed after autoradiography, the filter can be
washed at high stringency and reexposed. If the time required for
exposure makes this approach impractical, several hybridization
and/or washing stringencies should be tested in parallel.
Nucleic Acid Probe Assays
[0225] Methods such as PCR, branched DNA probe assays, or blotting
techniques utilizing nucleic acid probes according to the invention
can determine the presence of cDNA or mRNA. A probe is said to
"hybridize" with a sequence of the invention if it can form a
duplex or double stranded complex, which is stable enough to be
detected.
[0226] The nucleic acid probes will hybridize to the Neis serial
nucleotide sequences of the invention (including both sense and
antisense strands). Though many different nucleotide sequences will
encode the amino acid sequence, the native Neis serial sequence is
preferred because it is the actual sequence present in cells. mRNA
represents a coding sequence and so a probe should be complementary
to the coding sequence; single-stranded cDNA is complementary to
mRNA, and so a cDNA probe should be complementary to the non-coding
sequence.
[0227] The probe sequence need not be identical to the Neisserial
sequence (or its complement)--some variation in the sequence and
length can lead to increased assay sensitivity if the nucleic acid
probe can form a duplex with target nucleotides, which can be
detected. Also, the nucleic acid probe can include additional
nucleotides to stabilize the formed duplex. Additional Neisserial
sequence may also be helpful as a label to detect the formed
duplex. For example, a non-complementary nucleotide sequence may be
attached to the 5' end of the probe, with the remainder of the
probe sequence being complementary to a Neisserial sequence.
Alternatively, non-complementary bases or longer sequences can be
interspersed into the probe, provided that the probe sequence has
sufficient complementarity with the a Neis serial sequence in order
to hybridize therewith and thereby form a duplex which can be
detected.
[0228] The exact length and sequence of the probe will depend on
the hybridization conditions, such as temperature, salt condition
and the like. For example, for diagnostic applications, depending
on the complexity of the analyte sequence, the nucleic acid probe
typically contains at least 10-20 nucleotides, preferably 15-25,
and more preferably at least 30 nucleotides, although it may be
shorter than this. Short primers generally require cooler
temperatures to form sufficiently stable hybrid complexes with the
template.
[0229] Probes may be produced by synthetic procedures, such as the
triester method of Matteucci et al. [J. Am. Chem. Soc. (1981)
103:3185], or according to Urdea et al. [Proc. Natl. Acad. Sci. USA
(1983) 80: 7461], or using commercially available automated
oligonucleotide synthesizers.
[0230] The chemical nature of the probe can be selected according
to preference. For certain applications, DNA or RNA are
appropriate. For other applications, modifications may be
incorporated eg. backbone modifications, such as phosphorothioates
or methylphosphonates, can be used to increase in vivo half-life,
alter RNA affinity, increase nuclease resistance etc. [eg. see
Agrawal & Iyer (1995) Curr Opin Biotechnol 6:12-19; Agrawal
(1996) TIBTECH 14:376-387]; analogues such as peptide nucleic acids
may also be used [eg. see Corey (1997) TIBTECH 15:224-229; Buchardt
et al. (1993) TIBTECH 11:384-386].
[0231] One example of a nucleotide hybridization assay is described
by Urdea et al. in international patent application WO92/02526 [see
also U.S. Pat. No. 5,124,246].
[0232] Alternatively, the polymerase chain reaction (PCR) is
another well-known means for detecting small amounts of target
nucleic acids. The assay is described in: Mullis et al. [Meth.
Enzymol. (1987) 155: 335-350]; U.S. Pat. No. 4,683,195; and U.S.
Pat. No. 4,683,202. Two "primer" nucleotides hybridize with the
target nucleic acids and are used to prime the reaction. The
primers can comprise sequence that does not hybridize to the
sequence of the amplification target (or its complement) to aid
with duplex stability or, for example, to incorporate a convenient
restriction site. Typically, such sequence will flank the desired
Neisserial sequence.
[0233] A thermostable polymerase creates copies of target nucleic
acids from the primers using the original target nucleic acids as a
template. After a threshold amount of target nucleic acids are
generated by the polymerase, they can be detected by more
traditional methods, such as Southern blots. When using the
Southern blot method, the labelled probe will hybridize to the
Neisserial sequence (or its complement).
[0234] Also, mRNA or cDNA can be detected by traditional blotting
techniques described in Sambrook et al [supra]. mRNA, or cDNA
generated from mRNA using a polymerase enzyme, can be purified and
separated using gel electrophoresis. The nucleic acids on the gel
are then blotted onto a solid support, such as nitrocellulose. The
solid support is exposed to a labelled probe and then washed to
remove any unhybridized probe. Next, the duplexes containing the
labeled probe are detected. Typically, the probe is labelled with a
radioactive moiety.
EXAMPLES
[0235] The examples describe nucleic acid sequences which have been
identified in N. meningitidis, and N. gonorrhoeae along with their
respective and putative translation products. Not all of the
nucleic acid sequences are complete ie. they encode less than the
full-length wild-type protein.
[0236] The examples are generally in the following format: [0237] a
nucleotide sequence which has been identified in N. meningitidis
[0238] the putative translation product of said N. meningitidis
sequence [0239] a computer analysis of said translation product
based on database comparisons [0240] a corresponding nucleotide
sequence identified from N. gonorrhoeae [0241] the putative
translation product of said N. gonorrhoeae sequence [0242] a
comparision of the percentage of identity between the translation
product of the N. meningitidis sequence and the N. gonorrhoeae
sequence [0243] a description of the characteristics of the protein
which indicates that it might be suitably antigenic or
immunogenic.
[0244] Sequence comparisons were performed at NCBI
(ncbi.nlm.nih.gov) using the algorithms BLAST, BLAST2, BLASTn,
BLASTp, tBLASTn, BLASTx, & tBLASTx [eg. see also Altschul et
al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein
database search programs. Nucleic Acids Research 25:2289-3402].
Searches were performed against the following databases:
non-redundant GenBank+EMBL+DDBJ+PDB sequences and non-redundant
GenBank CDS translations+PDB+SwissProt+SPupdate+PIR sequences.
[0245] Dots within nucleotide sequences represent nucleotides which
have been arbitrarily introduced in order to maintain a reading
frame. In the same way, double-underlined nucleotides were removed.
Lower case letters represent ambiguities which arose during
alignment of independent sequencing reactions (some of the
nucleotide sequences in the examples are derived from combining the
results of two or more experiments).
[0246] Nucleotide sequences were scanned in all six reading frames
to predict the presence of hydrophobic domains using an algorithm
based on the statistical studies of Esposti et al. [Critical
evaluation of the hydropathy of membrane proteins (1990) Eur J
Biochem 190:207-219]. These domains represent potential
transmembrane regions or hydrophobic leader sequences.
[0247] Open reading frames were predicted from fragmented
nucleotide sequences using the program ORFFINDER (NCBI).
[0248] Underlined amino acid sequences indicate possible
transmembrane domains or leader sequences in the ORFs, as predicted
by the PSORT algorithm (psort.nibb.ac.jp). Functional domains were
also predicted using the MOTIFS program (GCG Wisconsin &
PROSITE).
[0249] For each of the following examples: based on the presence of
a putative leader sequence and/or several putative transmembrane
domains (single-underlined) in the gonococcal protein, it is
predicted that the proteins from N. meningitidis and N.
gonorrhoeae, and their respective epitopes, could be useful
antigens or immunogenic compositions for vaccines or
diagnostics.
[0250] The standard techniques and procedures which may be employed
in order to perform the invention (e.g. to utilize the disclosed
sequences for vaccination or diagnostic purposes) were summarized
above. This summary is not a limitation on the invention but,
rather, gives examples that may be used, but are not required.
[0251] In particular, the following methods were used to express,
purify and biochemically characterize the proteins of the
invention.
Chromosomal DNA Preparation
[0252] N. meningitidis strain 2996 was grown to exponential phase
in 100 ml of GC medium, harvested by centrifugation, and
resuspended in 5 ml buffer (20% Sucrose, 50 mM Tris-HCl, 50 mM
EDTA, pH 8.0). After 10 minutes incubation on ice, the bacteria
were lysed by adding 10 ml lysis solution (50 mM NaCl, 1%
Na-SARKOSYL.TM., 50 .mu.g/ml Proteinase K), and the suspension was
incubated at 37.degree. C. for 2 hours. Two phenol extractions
(equilibrated to pH 8) and one CHCl.sub.3/isoamylalcohol (24:1)
extraction were performed. DNA was precipitated by addition of 0.3M
sodium acetate and 2 volumes ethanol, and was collected by
centrifugation. The pellet was washed once with 70% ethanol and
redissolved in 4.0 ml TE buffer (10 mM Tris-HCl, 1 mM EDTA, pH 8).
The DNA concentration was measured by reading the OD at 260 nm.
Oligonucleotide Design
[0253] Synthetic oligonucleotide primers were designed on the basis
of the coding sequence of each ORF, using (a) the meningococcus B
sequence when available, or (b) the gonococcus/meningococcus A
sequence, adapted to the codon preference usage of meningococcus as
necessary. Any predicted signal peptides were omitted, by designing
the 5' primers to sequence immediately downstream from the
predicted leader sequence.
[0254] For most ORFs, the 5' primers included two restriction
enzyme recognition sites (BamHI-NdeI, BamHI-NheI, EcoRI-NdeI or
EcoRI-NheI), depending on the restriction pattern of the gene of
interest. The 3' primers included a XhoI or a HindIII restriction
site (table 1). This procedure was established in order to direct
the cloning of each amplification product (corresponding to each
ORF) into two different expression systems: pGEX-KG (using either
BamHI-XhoI, BamHI-HindIII, EcoRI-XhoI, or EcoRI-HindIII), and
pET21b+(using either NdeI-XhoI, NheI-XhoI, NdeI-HindIII, or
NheI-HindIII).
TABLE-US-00001 5'-end primer tail: CGCGGATCCCATATG (BamHI-NdeI)
CGCGGATCCGCTAGC (BamHI-NheI) CCGGAATTCTAGATATC (EcoRI-NdeI)
CCGGAATTCTAGCTAGC (EcoRI-NheI) 3'-end primer tail: CCCGCTCGAG
(XhoI) CCCGCTCGAG (HindIII)
[0255] For cloning ORFs into the pGEX-His Vector, the 5' and 3'
primers contained only one restriction enzyme site (EcoRI, KpnI or
SalI for the 5' primers and PstI, XbaI, SphI or SalI for the 3'
primers). Again restriction sites were chosen according to the
particular restriction pattern of the gene (table 1).
TABLE-US-00002 5'-end primer tail: (AAA)AAAGAATTC (EcoRI)
(AAA)AAAGGATCC (KpnI) 3'-end primer tail: (AAA)AAACTGCAG (PstI)
(AAA)AAATCTAGA (XbaI) AAAGCATGC (SphI) 5' or 3'-end primer tail:
AAAAAAGAATCC (PstI)
[0256] As well as containing the restriction enzyme recognition
sequences, the primers included nucleotides which hybridized to the
sequence to be amplified. The melting temperature depended on the
number and type of hybridizing nucleotides in the whole primer, and
was determined for each primer using the formulae:
T.sub.m=4(G+C)+2(A+T) (tail excluded)
T.sub.m=64.9+0.41(% GC)-600/N (whole primer)
The melting temperature of the selected oligonucleotides were
usually 65-70.degree. C. for the whole oligo and 50-55.degree. C.
for the hybridising region alone.
[0257] Table 1 shows the forward and reverse primers used for each
amplification. In certain cases, the sequences of the primer does
not match exactly the sequence of the predicted ORF. This is
because when initial amplifications were performed, the complete 5'
and/or 3' sequences for some meningococcal B ORFs were not be
known. However, the corresponding sequences had been identified in
Gonococcus or in Meningococcus A. Hence, when the Meningococcus B
sequence was incomplete or uncertain, Gonococcus or in
Meningococcus A sequences were used as the basis for the primer
design. These sequences were altered to take account of codon
preference. It can be appreciated that, once the complete sequence
is identified, this approach will no longer be necessary.
[0258] Oligonucleotides were synthesized using a Perkin Elmer 394
DNA/RNA SYNTHESIZER.TM., eluted from the columns in 2.0 ml
NH.sub.4OH, and deprotected by 5 hours incubation at 56.degree. C.
The oligos were precipitated by addition of 0.3M Na-Acetate and 2
volumes ethanol. The samples were centrifuged and the pellets
resuspended in either 100 .mu.l or 1.0 ml of water. The OD.sub.260
was determined using a Perkin Elmer LAMBDA BIO.TM. spectophotometer
and the concentration adjusted to 2-10 pmol/.mu.l.
Amplification
[0259] The standard PCR protocol was as follows: 50-200 ng of
genomic DNA was used as a template in the presence of 20-40 .mu.M
of each oligonucleotide primer, 400-800 .mu.M dNTPs solution,
1.times.PCR buffer (including 1.5 mM MgCl.sub.2), 2.5 units TaqI
DNA polymerase (using Perkin-Elmer AMPLITAQ.TM., GIBCO Platinum,
Pwo DNA polymerase, or Tahara Shuzo Taq polymerase). In some cases,
PCR was optimised by the addition of 10 .mu.l of DMSO or 50 .mu.l
of 2M Betaine.
[0260] After a hot start (adding the polymerase during a
preliminary 3 minute incubation of the whole mix at 95.degree. C.),
each sample underwent a two-step amplification. The first 5 cycles
were performed using the hybridization temperature that excluded
the restriction enzyme tail of the primer (see above). This was
followed by 30 cycles using the hybridization temperature
calculated for the whole length oligos. The cycles were followed by
a final 10 minute extension step at 72.degree. C. The standard
cycles were as follows:
TABLE-US-00003 Denaturation Hybridisation Elongation First 5 cycles
30 seconds 30 seconds 30-60 seconds 95.degree. C. 50-55.degree. C.
72.degree. C. Last 30 cycles 30 seconds 30 seconds 30-60 seconds
95.degree. C. 65-70.degree. C. 72.degree. C.
[0261] The elongation time varied according to the length of the
ORF to be amplified. Amplifications were performed using either a
9600 or a 2400 Perkin Elmer GeneAmp PCR System. To check the
results, 1/10 of the amplification volume was loaded onto a 1-1.5%
(w/v) agarose gel and the size of each amplified fragment compared
with a DNA molecular weight marker.
[0262] The amplified DNA was either loaded directly on a 1% agarose
gel or first precipitated with ethanol and resuspended in a volume
suitable to be loaded on a 1.0% agarose gel. The DNA fragment
corresponding to the band of the correct size was purified using
the Qiagen Gel Extraction Kit, following the manufacturer's
protocol. DNA fragments were eluted in a volume of 30 .mu.l or 50
.mu.l of either H2O or 10 mM Tris, pH 8.5.
Digestion of PCR Fragments
[0263] The purified DNA corresponding to the amplified fragment was
double-digested with the appropriate restriction enzymes for;
cloning into pET-21b+ and expressing the protein as a C-terminus
His-tagged fusion, for cloning into pGEX-KG and expressing the
protein as a N-terminus GST-fusion, and for cloning into pGEX-His
and expressing the protein as a N-terminus GST-his tagged
fusion.
[0264] Each purified DNA fragment was incubated at 37.degree. C.
for 3 hours to overnight with 20 units of appropriate restriction
enzyme (New England Biolabs) in a either 30 or 40 .mu.l in the
presence of suitable digestion buffer. Digested products were
purified using the QIAquick PCR purification kit (following the
manufacturer's instructions) and eluted in a final volume of 30 or
50 .mu.l of either H2O or 10 mM Tris, pH 8.5. The DNA concentration
was determined by quantitative agarose gel electrophoresis (1.0%
gel) in the presence of a titrated molecular weight marker.
Digestion of the Cloning Vectors (pET22B, pGEX-KG, pTRC-his A,
pET21b+, pGEX-KG, and pGEX-His)
[0265] The vector pGEX-His is a modified pGEX-2T vector carrying a
region encoding six histidine residues upstream of the thrombin
cleavage site and containing the multiple cloning site of the
vector pTRC99 (Pharmacia). 10 .mu.g plasmid was double-digested
with 50 units of each restriction enzyme in 200 .mu.l reaction
volume in the presence of appropriate buffer by overnight
incubation at 37.degree. C. After loading the whole digestion on a
1% agarose gel, the band corresponding to the digested vector was
purified from the gel using the Qiagen QIAquick Gel Extraction Kit
and the DNA was eluted in 50 .mu.l of 10 mM Tris-HCl, pH 8.5. The
DNA concentration was evaluated by measuring OD.sub.260 of the
sample, and adjusted to 50 .mu.g/.mu.l 1 .mu.l of plasmid was used
for each cloning procedure.
[0266] 10 .mu.g plasmid was double-digested with 50 units of each
restriction enzyme in 200 .mu.l reaction volume in the presence of
appropriate buffer by overnight incubation at 37.degree. C. The
digest was loaded onto a 1% agarose gel and the band corresponding
to the digested vector purified using the Qiagen QIAquick Gel
Extraction Kit. DNA was eluted in 50 .mu.l of 10 mM Tris-HCl, pH
8.5. The DNA concentration was evaluated by measuring OD.sub.260
and the concentration adjusted to 50 .mu.g/.mu.l. 1 .mu.l of
plasmid was used for each cloning procedure.
Cloning
[0267] For some ORFs, the fragments corresponding to each ORF,
previously digested and purified, were ligated in both pET22b and
pGEX-KG. In a final volume of 20 .mu.l, a molar ratio of 3:1
fragment/vector was ligated using 0.5 .mu.l of NEB T4 DNA ligase
(400 units/.mu.l), in the presence of the buffer supplied by the
manufacturer. The reaction was incubated at room temperature for 3
hours. In some experiments, ligation was performed using the
Boheringer "Rapid Ligation Kit", following the manufacturer's
instructions.
[0268] In order to introduce the recombinant plasmid in a suitable
strain, 100 .mu.l E. coli DH5 competent cells were incubated with
the ligase reaction solution for 40 minutes on ice, then at
37.degree. C. for 3 minutes, then, after adding 800 .mu.l LB broth,
again at 37.degree. C. for 20 minutes. The cells were then
centrifuged at maximum speed in an Eppendorf microfuge and
resuspended in approximately 200 .mu.l of the supernatant. The
suspension was then plated on LB ampicillin (100 mg/ml).
[0269] The screening of the recombinant clones was performed by
growing 5 randomly-chosen colonies overnight at 37.degree. C. in
either 2 ml (pGEX or pTC clones) or 5 ml (pET clones) LB broth+100
.mu.g/ml ampicillin. The cells were then pelletted and the DNA
extracted using the Qiagen QIAprep Spin Miniprep Kit, following the
manufacturer's instructions, to a final volume of 30 .mu.l. 5 .mu.l
of each individual miniprep (approximately 1 g) were digested with
either NdeI/XhoI or BamHI/XhoI and the whole digestion loaded onto
a 1-1.5% agarose gel (depending on the expected insert size), in
parallel with the molecular weight marker (1Kb DNA Ladder, GIBCO).
The screening of the positive clones was made on the base of the
correct insert size.
[0270] For other ORFs, the fragments corresponding to each ORF,
previously digested and purified, were ligated in both pET21b+ and
pGEX-KG. A molar ratio of 3:1 fragment/vector was used in a final
volume of 20 .mu.l, that included 0.5 .mu.l of T4 DNA ligase (400
units/.mu.l, NEB) and ligation buffer supplied by the manufacturer.
The reaction was performed at room temperature for 3 hours. In some
experiments, ligation was performed using the Boheringer "Rapid
Ligation Kit" and the manufacturer's protocol.
[0271] Recombinant plasmid was transformed into 100 .mu.l of
competent E. coli DH5 or HB101 by incubating the ligase reaction
solution and bacteria for 40 minutes on ice then at 37.degree. C.
for 3 minutes. This was followed by addition of 800 .mu.l LB broth
and incubation at 37.degree. C. for 20 minutes. The cells were then
centrifuged at maximum speed in an Eppendorf microfuge, resuspended
in approximately 200 .mu.l of the supernatant, and plated on LB
ampicillin (100 mg/ml) agar.
[0272] Screening for recombinant clones was performed by growing 5
randomly selected colonies overnight at 37.degree. C. in either 2.0
ml (pGEX-KG clones) or 5.0 ml (pET clones) LB broth+100 .mu.g/ml
ampicillin. Cells were pelleted and plasmid DNA extracted using the
Qiagen QIAprep Spin Miniprep Kit, following the manufacturer's
instructions. Approximately 1 .mu.g of each individual miniprep was
digested with the appropriate restriction enzymes and the digest
loaded onto a 1-1.5% agarose gel (depending on the expected insert
size), in parallel with the molecular weight marker (1 kb DNA
Ladder, GIBCO). Positive clones were selected on the basis of the
size of the insert.
[0273] ORFs were cloned in PGEX-His, by doubly-digesting the PC
product and ligating into similarly digested vector. After cloning,
recombinant plasmids were transformed into the E. coli host W3110.
Individual clones were grown overnight at 37.degree. C. in LB broth
with 50 .mu.g/ml ampicillin.
[0274] Certain ORFs may be cloned into the pGEX-HIS vector using
EcoRI-PstI cloning sites, or EcoRI-SalI, or SalI-PstI. After
cloning, the recombinant plasmids may be introduced in the E. coli
host W3110.
Expression
[0275] Each ORF cloned into the expression vector may then be
transformed into the strain suitable for expression of the
recombinant protein product. 1 .mu.l of each construct was used to
transform 30 .mu.l of E. coli BL21 (pGEX vector), E. coli TOP 10
(pTRC vector) or E. coli BL21-DE3 (pET vector), as described above.
In the case of the pGEX-His vector, the same E. coli strain (W3110)
was used for initial cloning and expression. Single recombinant
colonies were inoculated into 2 ml LB+Amp (100 .mu.g/ml), incubated
at 37.degree. C. overnight, then diluted 1:30 in 20 ml of LB+Amp
(100 vs/nal) in 100 ml flasks, making sure that the OD.sub.600
ranged between 0.1 and 0.15. The flasks were incubated at
30.degree. C. into gyratory water bath shakers until OD indicated
exponential growth suitable for induction of expression (0.4-0.8 OD
for pET and pTRC vectors; 0.8-1 OD for pGEX and pGEX-His vectors).
For the pET, pTRC and pGEX-His vectors, the protein expression was
induced by addiction of 1 mM IPTG, whereas in the case of pGEX
system the final concentration of IPTG was 0.2 mM. After 3 hours
incubation at 30.degree. C., the final concentration of the sample
was checked by OD. In order to check expression, 1 ml of each
sample was removed, centrifuged in a microfuge, the pellet
resuspended in PBS, and analysed by 12% SDS-PAGE with Coomassie
Blue staining. The whole sample was centrifuged at 6000 g and the
pellet resuspended in PBS for further use.
GST-Fusion Proteins Large-Scale Purification.
[0276] For some ORFs, a single colony was grown overnight at
37.degree. C. on LB+Amp agar plate. The bacteria were inoculated
into 20 ml of LB+Amp liquid culture in a water bath shaker and
grown overnight. Bacteria were diluted 1:30 into 600 ml of fresh
medium and allowed to grow at the optimal temperature
(20-37.degree. C.) to OD.sub.550 0.8-1. Protein expression was
induced with 0.2 mM IPTG followed by three hours incubation. The
culture was centrifuged at 8000 rpm at 4.degree. C. The supernatant
was discarded and the bacterial pellet was resuspended in 7.5 ml
cold PBS. The cells were disrupted by sonication on ice for 30 sec
at 40 W using a Branson sonifier B-15, frozen and thawed two times
and centrifuged again. The supernatant was collected and mixed with
150 .mu.l GLUTATHIONE-SEPHAROSE 4B.TM. resin (Pharmacia)
(previously washed with PBS) and incubated at room temperature for
30 minutes. The sample was centrifuged at 700 g for 5 minutes at
4C. The resin was washed twice with 10 ml cold PBS for 10 minutes,
resuspended in 1 ml cold PBS, and loaded on a disposable column.
The resin was washed twice with 2 ml cold PBS until the
flow-through reached OD.sub.280 of 0.02-0.06. The GST-fusion
protein was eluted by addition of 700 .mu.l cold Glutathione
elution buffer (10 mM reduced glutathione, 50 mM Tris-HCl) and
fractions collected until the OD.sub.280 was 0.1. 21 .mu.l of each
fraction were loaded on a 12% SDS gel using either Biorad SDS-PAGE
Molecular weight standard broad range (M1) (200, 116.25, 97.4,
66.2, 45, 31, 21.5, 14.4, 6.5 kDa) or Amersham Rainbow Marker (M'')
(220, 66, 46, 30, 21.5, 14.3 kDa) as standards. As the MW of GST is
26 kDa, this value must be added to the MW of each GST-fusion
protein.
[0277] For other ORFs, for each clone to be purified as a
GST-fusion, a single colony was streaked out and grown overnight at
37.degree. C. on LB/Amp (100 .mu.g/ml) agar plate. An isolated
colony from this plate was inoculated into 20 ml of LB/Amp (100
.mu.g/ml) liquid medium and grown overnight at 37.degree. C. with
shaking. The overnight culture was diluted 1:30 into 600 ml of
LB/Amp (100 .mu.g/ml) liquid medium and allowed to grow at the
optimal temperature (20-37.degree. C.) until the OD.sub.550 reached
0.6-0.8. Recombinant protein expression was induced by addition of
IPTG (final concentration 0.2 mM) and the culture incubated for a
further 3 hours. The bacteria were harvested by centrifugation at
8000.times.g for 15 min at 4.degree. C.
[0278] The bacterial pellet was resuspended in 7.5 ml cold PBS.
Cells were disrupted by sonication on ice for 30 sec at 40 W using
a Branson sonifier 450 and centrifuged at 13 000.times.g for 30 min
at 4.degree. C. The supernatant was collected and mixed with 150
.mu.l GLUTATHIONE-SEPHAROSE 4B.TM. resin (Pharmacia), previously
equilibrated with PBS, and incubated at room temperature with
gentle agitation for 30 min. The batch-wise preparation was
centrifuged at 700.times.g for 5 min at 4.degree. C. and the
supernatant discarded. The resin was washed twice (batchwise) with
10 ml cold PBS for 10 min, resuspended in 1 ml cold PBS, and loaded
onto a disposable column. The resin continued to be washed twice
with cold PBS, until the OD.sub.280nm of the flow-through reached
0.02-0.01. The GST-fusion protein was eluted by addition of 700
.mu.l cold glutathione elution buffer (10 mM reduced glutathione,
50 mM Tris-HCl pH 8.0) and fractions collected, until the
OD.sub.280nm of the eluate indicated all the recombinant protein
was obtained. 20 .mu.l aliquots of each elution fraction were
analyzed by SDS-PAGE using a 12% gel. The molecular mass of the
purified proteins was determined using either the Bio-Rad broad
range molecular weight standard (M1) (200, 116, 97.4, 66.2, 45.0,
31.0, 21.5, 14.4, 6.5 kDa) or the Amersham Rainbow Marker (M2)
(220, 66.2, 46.0, 30.0, 21.5, 14.3 kDa). The molecular weights of
GST-fusion proteins are a combination of the 26 kDa GST protein and
its fusion partner. Protein concentrations were estimated using the
Bradford assay.
His-Fusion Soluble Proteins Large-Scale Purification.
[0279] For some ORFs, a single colony was grown overnight at
37.degree. C. on a LB+Amp agar plate. The bacteria were inoculated
into 20 ml of LB+Amp liquid culture and incubated overnight in a
water bath shaker. Bacteria were diluted 1:30 into 600 ml fresh
medium and allowed to grow at the optimal temperature
(20-37.degree. C.) to OD.sub.550 0.6-0.8. Protein expression was
induced by addition of 1 mM IPTG and the culture further incubated
for three hours. The culture was centrifuged at 8000 rpm at
4.degree. C., the supernatant was discarded and the bacterial
pellet was resuspended in 7.5 ml cold 10 mM imidazole buffer (300
mM NaCl, 50 mM phosphate buffer, 10 mM imidazole, pH 8). The cells
were disrupted by sonication on ice for 30 sec at 40 W using a
Branson sonifier B-15, frozen and thawed two times and centrifuged
again. The supernatant was collected and mixed with 150
.mu.Ni.sup.2+-resin (Pharmacia) (previously washed with 10 mM
imidazole buffer) and incubated at room temperature with gentle
agitation for 30 minutes. The sample was centrifuged at 700 g for 5
minutes at 4.degree. C. The resin was washed twice with 10 ml cold
10 mM imidazole buffer for 10 minutes, resuspended in 1 ml cold 10
mM imidazole buffer and loaded on a disposable column. The resin
was washed at 4.degree. C. with 2 ml cold 10 mM imidazole buffer
until the flow-through reached the O.D.sub.280 of 0.02-0.06. The
resin was washed with 2 ml cold 20 mM imidazole buffer (300 mM
NaCl, 50 mM phosphate buffer, 20 mM imidazole, pH 8) until the
flow-through reached the O.D.sub.280 of 0.02-0.06. The His-fusion
protein was eluted by addition of 700 .mu.l cold 250 mM imidazole
buffer (300 mM NaCl, 50 mM phosphate buffer, 250 mM imidazole, pH
8) and fractions collected until the O.D.sub.280 was 0.1. 21 .mu.l
of each fraction were loaded on a 12% SDS gel.
His-Fusion Insoluble Proteins Large-Scale Purification.
[0280] A single colony was grown overnight at 37.degree. C. on a
LB+Amp agar plate. The bacteria were inoculated into 20 ml of
LB+Amp liquid culture in a water bath shaker and grown overnight.
Bacteria were diluted 1:30 into 600 ml fresh medium and let to grow
at the optimal temperature (37.degree. C.) to O.D.sub.550 0.6-0.8.
Protein expression was induced by addition of 1 mM IPTG and the
culture further incubated for three hours. The culture was
centrifuged at 8000 rpm at 4.degree. C. The supernatant was
discarded and the bacterial pellet was resuspended in 7.5 ml buffer
B (urea 8M, 10 mM Tris-HCl, 100 mM phosphate buffer, pH 8.8). The
cells were disrupted by sonication on ice for 30 sec at 40 W using
a Branson sonifier B-15, frozen and thawed twice and centrifuged
again. The supernatant was stored at -20.degree. C., while the
pellets were resuspended in 2 ml guanidine buffer (6M guanidine
hydrochloride, 100 mM phosphate buffer, 10 mM Tris-HCl, pH 7.5) and
treated in a homogenizer for 10 cycles. The product was centrifuged
at 13000 rpm for 40 minutes. The supernatant was mixed with 150
.mu.l Ni.sup.2+-resin (Pharmacia) (previously washed with buffer B)
and incubated at room temperature with gentle agitation for 30
minutes. The sample was centrifuged at 700 g for 5 minutes at
4.degree. C. The resin was washed twice with 10 ml buffer B for 10
minutes, resuspended in 1 ml buffer B, and loaded on a disposable
column. The resin was washed at room temperature with 2 ml buffer B
until the flow-through reached the OD.sub.280 of 0.02-0.06. The
resin was washed with 2 ml buffer C (urea 8M, 10 mM Tris-HCl, 100
mM phosphate buffer, pH 6.3) until the flow-through reached the
O.D.sub.280 of 0.02-0.06. The His-fusion protein was eluted by
addition of 700 g elution buffer (urea 8M, 10 mM Tris-HCl, 100 mM
phosphate buffer, pH 4.5) and fractions collected until the
OD.sub.280 was 0.1. 21 .mu.l of each fraction were loaded on a 12%
SDS gel.
Purification of His-Fusion Proteins.
[0281] For each clone to be purified as a His-fusion, a single
colony was streaked out and grown overnight at 37.degree. C. on
LB/Amp (100 .mu.g/ml) agar plate. An isolated colony from this
plate was inoculated into 20 ml of LB/Amp (100 .mu.g/ml) liquid
medium and grown overnight at 37.degree. C. with shaking. The
overnight culture was diluted 1:30 into 600 ml of LB/Amp (100
.mu.g/ml) liquid medium and allowed to grow at the optimal
temperature (20-37.degree. C.) until the OD.sub.550 reached
0.6-0.8. Expression of recombinant protein was induced by addition
of IPTG (final concentration 1.0 mM) and the culture incubated for
a further 3 hours. The bacteria were harvested by centrifugation at
8000.times.g for 15 min at 4.degree. C.
[0282] The bacterial pellet was resuspended in 7.5 ml either (i)
cold buffer A (300 mM NaCl, 50 mM phosphate buffer, 10 mM
imidazole, pH 8.0) for soluble proteins or (ii) buffer B (8M urea,
10 mM TrisHCl, 100 mM phosphate buffer, pH 8.8) for insoluble
proteins. Cells were disrupted by sonication on ice four times for
30 sec at 40 W using a Branson sonifier 450 and centrifuged at 13
000.times.g for 30 min at 4.degree. C. For insoluble proteins,
pellets were resuspended in 2.0 ml buffer C (6M guanidine
hydrochloride, 100 mM phosphate buffer, 10 mM Tris-HCl, pH 7.5) and
treated with a Dounce homogenizer for 10 cycles. The homogenate was
centrifuged at 13 000.times.g for 40 min and the supernatant
retained.
[0283] Supernatants for both soluble and insoluble preparations
were mixed with 150 .mu.l Ni.sup.2+-resin (previously equilibrated
with either buffer A or buffer B, as appropriate) and incubated at
room temperature with gentle agitation for 30 min. The resin was
CHELATING SEPHAROSE FAST FLOW.TM. (Pharmacia), prepared according
to the manufacturers protocol. The batch-wise preparation was
centrifuged at 700.times.g for 5 min at 4.degree. C. and the
supernatant discarded. The resin was washed twice (batch-wise) with
10 ml buffer A or B for 10 min, resuspended in 1.0 ml buffer A or B
and loaded onto a disposable column. The resin continued to be
washed with either (i) buffer A at 4.degree. C. or (ii) buffer B at
room temperature, the OD.sub.280nm of the flow-through reached
0.02-0.01. The resin was further washed with either (i) cold buffer
C (300 mM NaCl, 50 mM phosphate buffer, 20 mM imidazole, pH 8.0) or
(ii) buffer D (8M urea, 10 mM Tris-HCl, 100 mM phosphate buffer, pH
6.3) until the OD.sub.280nm of the flow-through reached 0.02-0.01.
The His-fusion protein was eluted by addition of 700 .mu.l of
either (1) cold elution buffer A (300 mM NaCl, 50 mM phosphate
buffer, 250 mM imidazole, pH 8.0) or (ii) elution buffer B (8 M
urea, 10 mM Tris-HCl, 100 mM phosphate buffer, pH 4.5) and
fractions collected until the O.D.sub.280nm indicated all the
recombinant protein was obtained. 20 .mu.l aliquots of each elution
fraction were analyzed by SDS-PAGE using a 12% gel. Protein
concentrations were estimated using the Bradford assay.
His-Fusion Proteins Renaturation
[0284] In the cases where denaturation was required to solubilize
proteins, a renaturation step was employed prior to immunization.
Glycerol was added to the denatured fractions obtained above to a
final concentration of 10%(v/v). The proteins were then diluted to
200 m/ml using dialysis buffer I (10%(v/v) glycerol, 0.5M arginine,
50 mM phosphate buffer, 5 mM reduced glutathione, 0.5 mM oxidised
glutathione, 2M urea, pH 8.8) and dialysed against the same buffer
for 12-14 hours at 4.degree. C. Further dialysis was performed with
buffer II (10% (v/v) glycerol, 0.5M arginine, 50 mM phosphate
buffer, 50 mM reduced glutathione, 5.0 mM oxidised glutathione, pH
8.8) for 12-14 hours at 4.degree. C.
[0285] Alternatively, 10% glycerol was added to the denatured
proteins. The proteins were then diluted to 20 m/ml using dialysis
buffer I (10% glycerol, 0.5M arginine, 50 mM phosphate buffer, 5 mM
reduced glutathione, 0.5 mM oxidised glutathione, 2M urea, pH 8.8)
and dialysed against the same buffer at 4.degree. C. for 12-14
hours. The protein was further dialysed against dialysis buffer II
(10% glycerol, 0.5M arginine, 50 mM phosphate buffer, 5 mM reduced
glutathione, 0.5 mM oxidised glutathione, pH 8.8) for 12-14 hours
at 4.degree. C.
[0286] Protein concentration was evaluated using the formula:
Protein (mg/ml)=(1.55.times.OD.sub.280)-(0.76.times.OD.sub.260)
Purification of Proteins
[0287] To analyse the solubility, pellets obtained from 3.0 ml
cultures were resuspended in 500 .mu.l buffer M1 (PBS pH 7.2). 25
.mu.l of lysozyme (10 mg/ml) was added and the bacteria incubated
for 15 min at 4.degree. C. Cells were disrupted by sonication on
ice four times for 30 sec at 40 W using a Branson sonifier 450 and
centrifuged at 13 000.times.g for 30 min at 4.degree. C. The
supernatant was collected and the pellet resuspended in buffer M2
[8M urea, 0.5M NaCl, 20 mM imidazole and 0.1 M NaH.sub.2PO.sub.4]
and incubated for 3 to 4 hours at 4.degree. C. After
centrifugation, the supernatant was collected and the pellet
resuspended in buffer M3 [6M guanidinium-HCl, 0.5M NaCl, 20 mM
imidazole and 0.1 M NaH.sub.2PO.sub.4] overnight at 4.degree. C.
The supernatants from all steps were analysed by SDS-PAGE. Some
proteins were found to be soluble in PBS, others needed urea or
guanidinium-HCl for solubilization.
[0288] For preparative scale purification, 500 ml cultures were
induced and fusion proteins solubilized in either buffer M1, M2, or
M3 using the procedure described above. Crude extracts were loaded
onto a Ni-NTA superflow column (Qiagen) equilibrated with buffer
M1, M2, or M3 depending on the solubilization buffer employed.
Unbound material was eluted with the corresponding buffer
containing 500 mM imidazole then dialysed against the same buffer
in the absence of imidazole.
Mice Immunisations
[0289] 20 .mu.g of each purified protein are used to immunise mice
intraperitoneally. In the case of some ORFs, Balb-C mice were
immunised with Al(OH).sub.3 as adjuvant on days 1, 21 and 42, and
immune response was monitored in samples taken on day 56. For other
ORFs, CD1 mice could be immunised using the same protocol. For ORFs
25 and 40, CD1 mice were immunised using Freund's adjuvant, and the
same immunisation protocol was used, except that the immune
response was measured on day 42, rather than 56. Similarly, for
still other ORFs, CD1 mice were immunised with Freund's adjuvant,
but the immune response was measured on day 49. Alternatively, 20
.mu.g of each purified protein was mixed with Freund's adjuvant and
used to immunize CD1 mice intraperitoneally. For many of the
proteins, the immunization was performed on days 1, 21 and 35, and
immune response was monitored in samples taken on days 34 and 49.
For some proteins, the third immunization was performed on day 28,
rather than 35, and immune response was measured on days 20 and 42,
rather than 34 and 49.
ELISA Assay (Sera Analysis)
[0290] The acapsulated MenB M7 strain was plated on chocolate agar
plates and incubated overnight at 37.degree. C. Bacterial colonies
were collected from the agar plates using a sterile dracon swab and
inoculated into 7 ml of Mueller-Hinton Broth (Difco) containing
0.25% Glucose. Bacterial growth was monitored every 30 minutes by
following OD.sub.620. The bacteria were let to grow until the OD
reached the value of 0.3-0.4. The culture was centrifuged for 10
minutes at 10000 rpm. The supernatant was discarded and bacteria
were washed once with PBS, resuspended in PBS containing 0.025%
formaldehyde, and incubated for 2 hours at room temperature and
then overnight at 4.degree. C. with stirring. 100 .mu.l bacterial
cells were added to each well of a 96 well Greiner plate and
incubated overnight at 4.degree. C. The wells were then washed
three times with PBT washing buffer (0.1% TWEEN-20.TM. in PBS). 200
.mu.l of saturation buffer (2.7% Polyvinylpyrrolidone 10 in water)
was added to each well and the plates incubated for 2 hours at
37.degree. C. Wells were washed three times with PBT. 200 .mu.l of
diluted sera (Dilution buffer: 1% BSA, 0.1% TWEEN-20.TM., 0.1%
NaN.sub.3 in PBS) were added to each well and the plates incubated
for 90 minutes at 37.degree. C. Wells were washed three times with
PBT. 100 .mu.l of HRP-conjugated rabbit anti-mouse (Dako) serum
diluted 1:2000 in dilution buffer were added to each well and the
plates were incubated for 90 minutes at 37.degree. C. Wells were
washed three times with PBT buffer. 100 .mu.l of substrate buffer
for HRP (25 ml of citrate buffer pH5, 10 mg of O-phenildiamine and
10 .mu.l of H.sub.2O) were added to each well and the plates were
left at room temperature for 20 minutes. 100 .mu.l H.sub.2SO.sub.4
was added to each well and OD.sub.490 was followed. The ELISA was
considered positive when OD490 was 2.5 times the respective
pre-immune sera.
[0291] Alternatively, The acapsulated MenB M7 strain was plated on
chocolate agar plates and incubated overnight at 37.degree. C.
Bacterial colonies were collected from the agar plates using a
sterile dracon swab and inoculated into Mueller-Hinton Broth
(Difco) containing 0.25% Glucose. Bacterial growth was monitored
every 30 minutes by following OD.sub.620. The bacteria were let to
grow until the OD reached the value of 0.3-0.4. The culture was
centrifuged for 10 minutes at 10 000 rpm. The supernatant was
discarded and bacteria were washed once with PBS, resuspended in
PBS containing 0.025% formaldehyde, and incubated for 1 hour at
37.degree. C. and then overnight at 4.degree. C. with stirring. 100
.mu.l bacterial cells were added to each well of a 96 well Greiner
plate and incubated overnight at 4.degree. C. The wells were then
washed three times with PBT washing buffer (0.1% TWEEN-20.TM. in
PBS). 200 .mu.l of saturation buffer (2.7% Polyvinylpyrrolidone 10
in water) was added to each well and the plates incubated for 2
hours at 37.degree. C. Wells were washed three times with PBT. 200
.mu.l of diluted sera (Dilution buffer: 1% BSA, 0.1% TWEEN-20.TM.,
0.1% NaN.sub.3 in PBS) were added to each well and the plates
incubated for 2 hours at 37.degree. C. Wells were washed three
times with PBT. 100 .mu.l of HRP-conjugated rabbit anti-mouse
(Dako) serum diluted 1:2000 in dilution buffer were added to each
well and the plates were incubated for 90 minutes at 37.degree. C.
Wells were washed three times with PBT buffer. 100 .mu.l of
substrate buffer for HRP (25 ml of citrate buffer pH5, 10 mg of
O-phenildiamine and 10 .mu.l of H.sub.2O.sub.2) were added to each
well and the plates were left at room temperature for 20 minutes.
100 .mu.l H.sub.2SO.sub.4 was added to each well and OD.sub.490 was
followed. The ELISA titers were calculated arbitrarily as the
dilution of sera which gave an OD.sub.490 value of 0.4 above the
level of preimmune sera. The ELISA was considered positive when the
dilution of sera with OD.sub.490 of 0.4 was higher than 1:400.
FACScan Bacteria Binding Assay Procedure.
[0292] The acapsulated MenB M7 strain was plated on chocolate agar
plates and incubated overnight at 37.degree. C. Bacterial colonies
were collected from the agar plates using a sterile dracon swab and
inoculated into 4 tubes containing 8 ml each Mueller-Hinton Broth
(Difco) containing 0.25% glucose. Bacterial growth was monitored
every 30 minutes by following OD.sub.620. The bacteria were let to
grow until the OD reached the value of 0.35-0.5. The culture was
centrifuged for 10 minutes at 4000 rpm. The supernatant was
discarded and the pellet was resuspended in blocking buffer (1%
BSA, 0.4% NaN.sub.3) and centrifuged for 5 minutes at 4000 rpm.
Cells were resuspended in blocking buffer to reach OD.sub.620 of
0.07. 100 .mu.l bacterial cells were added to each well of a Costar
96 well plate. 100 .mu.l of diluted (1:200) sera (in blocking
buffer) were added to each well and plates incubated for 2 hours at
4.degree. C. Cells were centrifuged for 5 minutes at 4000 rpm, the
supernatant aspirated and cells washed by addition of 200
.mu.l/well of blocking buffer in each well. 100 .mu.l of
R-Phicoerytrin conjugated F(ab).sub.2 goat anti-mouse, diluted
1:100, was added to each well and plates incubated for 1 hour at
4.degree. C. Cells were spun down by centrifugation at 4000 rpm for
5 minutes and washed by addition of 200 .mu.l/well of blocking
buffer. The supernatant was aspirated and cells resuspended in 200
.mu.l/well of PBS, 0.25% formaldehyde. Samples were transferred to
FACScan tubes and read. The condition for FACScan setting were: FL1
on, FL2 and FL3 off; FSC-H Treshold:92; FSC PMT Voltage: E 02; SSC
PMT: 474; Amp. Gains 7.1; FL-2 PMT: 539. Compensation values:
0.
OMV Preparations
[0293] Bacteria were grown overnight on 5 GC plates, harvested with
a loop and resuspended in 10 ml 20 mM Tris-HCl. Heat inactivation
was performed at 56.degree. C. for 30 minutes and the bacteria
disrupted by sonication for 10' on ice (50% duty cycle, 50%
output). Unbroken cells were removed by centrifugation at 5000 g
for 10 minutes and the total cell envelope fraction recovered by
centrifugation at 50000 g at 4.degree. C. for 75 minutes. To
extract cytoplasmic membrane proteins from the crude outer
membranes, the whole fraction was resuspended in 2% sarkosyl
(Sigma) and incubated at room temperature for 20 minutes. The
suspension was centrifuged at 10000 g for 10 minutes to remove
aggregates, and the supernatant further ultracentrifuged at 50000 g
for 75 minutes to pellet the outer membranes. The outer membranes
were resuspended in 10 mM Tris-HCl, pH8 and the protein
concentration measured by the Bio-Rad Protein assay, using BSA as a
standard.
Whole Extracts Preparation
[0294] Bacteria were grown overnight on a GC plate, harvested with
a loop and resuspended in 1 ml of 20 mM Tris-HCl. Heat inactivation
was performed at 56.degree. C. for 30' minutes.
Western Blotting
[0295] Purified proteins (500 ng/lane), outer membrane vesicles (5
.mu.g) and total cell extracts (25 .mu.g) derived from MenB strain
2996 were loaded onto a 12% SDS-polyacrylamide gel and transferred
to a nitrocellulose membrane. The transfer was performed for 2
hours at 150 mA at 4.degree. C., using transfer buffer (0.3% Tris
base, 1.44% glycine, 20% (v/v) methanol). The membrane was
saturated by overnight incubation at 4.degree. C. in saturation
buffer (10% skimmed milk, 0.1% TRITON X100.TM. in PBS). The
membrane was washed twice with washing buffer (3% skimmed milk,
0.1% TRITON X100.TM. in PBS) and incubated for 2 hours at
37.degree. C. with mice sera diluted 1:200 in washing buffer. The
membrane was washed twice and incubated for 90 minutes with a
1:2000 dilution of horseradish peroxidase labeled anti-mouse Ig.
The membrane was washed twice with 0.1% TRITON X100.TM. in PBS and
developed with the OPTI-4CN SUBSTRATE KIT.TM. (Bio-Rad). The
reaction was stopped by adding water.
Bactericidal Assay
[0296] MC58 and 2996 strains were grown overnight at 37.degree. C.
on chocolate agar plates. 5-7 colonies were collected and used to
inoculate 7 ml Mueller-Hinton broth. The suspension was incubated
at 37.degree. C. on a nutator and let to grow until OD.sub.620 was
in between 0.5-0.8. The culture was aliquoted into sterile 1.5 ml
Eppendorf tubes and centrifuged for 20 minutes at maximum speed in
a microfuge. The pellet was washed once in Gey's buffer (Gibco) and
resuspended in the same buffer to an OD.sub.620 of 0.5, diluted
1:20000 in Gey's buffer and stored at 25.degree. C.
[0297] 50 .mu.l of Gey's buffer/1% BSA was added to each well of a
96-well tissue culture plate. 25 .mu.l of diluted (1:100) mice sera
(dilution buffer: Gey's buffer/0.2% BSA) were added to each well
and the plate incubated at 4.degree. C. 25 .mu.l of the previously
described bacterial suspension were added to each well. 25 .mu.l of
either heat-inactivated (56.degree. C. waterbath for 30 minutes) or
normal baby rabbit complement were added to each well. Immediately
after the addition of the baby rabbit complement, 22 .mu.l of each
sample/well were plated on Mueller-Hinton agar plates (time 0). The
96-well plate was incubated for 1 hour at 37.degree. C. with
rotation and then 22 .mu.l of each sample/well were plated on
Mueller-Hinton agar plates (time 1). After overnight incubation the
colonies corresponding to time 0 and time 1 h were counted.
Gene Variability
[0298] The ORF4 and 919 genes were amplified by PCR on chromosomal
DNA extracted from various Neisseria strains (see list of strains).
The following oligonucleotides used as PCR primers were designed in
the upstream and downstream regions of the genes:
TABLE-US-00004 orf 4.1 (forward) (SEQ ID NO: 3266)
CGAATCCGGACGGCAGGACTC orf 4.3 (reverse) (SEQ ID NO: 3267)
GGCAGGGAATGGCGGATTAAAG 919.1 (forward) (SEQ ID NO: 3268)
AAAATGCCTCTCCACGGCTG or (SEQ ID NO: 3269) CTGCGCCCTGTGTTAAAATCCCCT
919.6 (reverse) (SEQ ID NO: 3270) CAAATAAGAAAGGAATTTTG or (SEQ ID
NO: 3271) GGTATCGCAAAACTTCGCCTTAATGCG
The PCR cycling conditions were:
TABLE-US-00005 1 cycle 2 min. at 94.degree. 30 cycles 30 sec. at
94.degree. 30 sec. at ~54.degree.or ~60.degree. (in according to Tm
of the primers) 40 sec. at 72.degree. 1 cycle 7 min. at
72.degree.
The PCR products were purified from 1% agarose gel and sequenced
using the following primers:
TABLE-US-00006 orf 4.1 (forward) (SEQ ID NO: 3272)
CGAATCCGGACGGCAGGACTC orf 4.2 (forward) (SEQ ID NO: 3273)
CGACCGCGCCTTTGGGACTG orf 4.3 (reverse) (SEQ ID NO: 3274)
GGCAGGGAATGGCGGATTAAAG orf 4.4 (reverse) (SEQ ID NO: 3275)
TCTTTGAGTTTGATCCAACC 919.1 (forward) (SEQ ID NO: 3276)
AAAATGCCTCTCCACGGCTG or (SEQ ID NO: 3277) CTGCGCCCTGTGTTAAAATCCCCT
919.2 (forward) (SEQ ID NO: 3278) ATCCTTCCGCCTCGGCTGCG 919.3
(forward) (SEQ ID NO: 3279) AAAACAGCGGCACAATCGAC 919.4 (forward)
(SEQ ID NO: 3280) ATAAGGGCTACCTCAAACTC 919.5 (forward) (SEQ ID NO:
3281) GCGCGTGGATTATTTTTGGG 919.6 (reverse) (SEQ ID NO: 3282)
CAAATAAGAAAGGAATTTTG or (SEQ ID NO: 3283)
GGTATCGCAAAACTTCGCCTTAATGCG 919.7 (reverse) (SEQ ID NO: 3284)
CCCAAGGTAATGTAGTGCCG 919.8 (reverse) (SEQ ID NO: 3285)
TAAAAAAAAGTTCGACAGGG 919.9 (reverse) (SEQ ID NO: 3286)
CCGTCCGCCTGTCGTCGCCC 919.10 (reverse) (SEQ ID NO: 3287)
TCGTTCCGGCGGGGTCGGGG
[0299] All documents cited herein are incorporated by reference in
their entireties.
[0300] The following Examples are presented to illustrate, not
limit, the invention.
Example 1
[0301] Using the above-described procedures, the following
oligonucleotide primers were employed in the polymerase chain
reaction (PCR) assay in order to clone the ORFs as indicated:
TABLE-US-00007 TABLE 1 Oligonucleotides used for PCR for Examples
2-10 ORF Primer Sequence Restriction sites 279 Forward
CGCGGATCCCATATG-TTGCCTGCAATCACGATT BamHI-NdeI <SEQ ID 3021>
Reverse CCCGCTCGAG-TTTAGAAGCGGGCGGCAA <SEQ XhoI ID 3022> 519
Forward CGCGGATCCCATATG-TTCAAATCCTTTGTCGTCA BamHI-NdeI <SEQ ID
3023> Reverse CCCGCTCGAG-TTTGGCGGTTTTGCTGC <SEQ ID XhoI
3024> 576 Forward CGCGGATCCCATATG-GCCGCCCCCGCATCT BamHI-NdeI
<SEQ ID 3025> Reverse CCCGCTCGAG-ATTTACTTTTTTGATGTCGAC XhoI
<SEQ ID 3026> 919 Forward CGCGGATCCCATATG-TGCCAAAGCAAGAGCATC
BamHI-NdeI <SEQ ID 3027> Reverse CCCGCTCGAG-CGGGCGGTATTCGGG
<SEQ ID XhoI 3028> 121 Forward
CGCGGATCCCATATG-GAAACACAGCTTTACAT BamHI-NdeI <SEQ ID 3029>
Reverse CCCGCTCGAG-ATAATAATATCCCGCGCCC <SEQ XhoI ID 3030> 128
Forward CGCGGATCCCATATG-ACTGACAACGCACT <SEQ BamHI-NdeI ID
3031> Reverse CCCGCTCGAG-GACCGCGTTGTCGAAA <SEQ ID XhoI
3032> 206 Forward CGCGGATCCCATATG-AAACACCGCCAACCGA BamHI-NdeI
<SEQ ID 3033> Reverse CCCGCTCGAG-TTCTGTAAAAAAAGTATGTGC XhoI
<SEQ ID 3034> 287 Forward CCGGAATTCTAGCTAGC-CTTTCAGCCTGCGGG
EcoRI-NheI <SEQ ID 3035> Reverse
CCCGCTCGAG-ATCCTGCTCTTTTTTGCC <SEQ ID XhoI 3036> 406 Forward
CGCGGATCCCATATG-TGCGGGACACTGACAG BamHI-NdeI <SEQ ID 3037>
Reverse CCCGCTCGAG-AGGTTGTCCTTGTCTATG <SEQ XhoI ID 3038>
Localization of the ORFs
[0302] The following DNA and amino acid sequences are identified by
titles of the following form: [g, m, or a] [#].[seq or pep], where
"g" means a sequence from N. gonorrhoeae, "m" means a sequence from
N. meningitidis B, and "a" means a sequence from N. meningitidis A;
"#" means the number of the sequence; "seq" means a DNA sequence,
and "pep" means an amino acid sequence. For example, "g001.seq"
refers to an N. gonorrhoeae DNA sequence, number 1. The presence of
the suffix "-1" to these sequences indicates an additional sequence
found for the same ORF, thus, data for an ORF having both an
unsuffixed and a suffixed sequence designation applies to both such
designated sequences. Further, open reading frames are identified
as ORF #, where "#" means the number of the ORF, corresponding to
the number of the sequence which encodes the ORF, and the ORF
designations may be suffixed with ".ng" or ".a", indicating that
the ORF corresponds to a N. gonorrhoeae sequence or a N.
meningitidis A sequence, respectively. The word "partial" before a
sequence indicates that the sequence may be partial or a complete
ORF. Computer analysis was performed for the comparisons that
follow between "g", "m", and "a" peptide sequences; and therein the
"pep" suffix is implied where not expressly stated. Further, in the
event of a conflict between the text immediately preceding and
describing which sequences are being compared, and the designated
sequences being compared, the designated sequence controls and is
the actual sequence being compared
TABLE-US-00008 ORF: contig: 279 gnm4.seq
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3039>:
TABLE-US-00009 m279.seq 1 ATAACGCGGA TTTGCGGCTG CTTGATTTCA
ACGGTTTTCA GGGCTTCGGC 51 AAGTTTGTCG GCGGCGGGTT TCATCAGGCT
GCAATGGGAA GGTACGGACA 101 CGGGCAGCGG CAGGGCGCGT TTGGCACCGG
CTTCTTTGGC GGCAGCCATG 151 GCGCGTCCGA CGGCGGCGGC GTTGCCTGCA
ATCACGATTT GTCCGGGTGA 201 GTTGAAGTTG ACGGCTTCGA CCACTTCGCT
TTGGGCGGCT TCGGCACAAA 251 TGGCTTTAAC CTGCTCATCT TCCAAGCCGA
GAATCGCCGC CATTGCGCCC 301 ACGCCTTGCG GTACGGCGGA CTGCATCAGT
TCGGCGCGCA GGCGCACGAG 351 TTTGACCGCG TCGGCAAAAT TCAATGCGCC
GGCGGCAACG AGTGCGGTGT 401 ATTCGCCGAG GCTGTGTCCG GCAACGGCGG
CAGGCGTTTT GCCGCCCGCT 451 TCTAAATAG
This corresponds to the amino acid sequence <SEQ ID 3040; ORF
279>:
TABLE-US-00010 m279.pep 1 ITRICGCLIS TVFRASASLS AAGFIRLQWE
GTDTGSGRAR LAPASLAAAM 51 ARPTAAALPA ITICPGELKL TASTTSLWAA
SAQMALTCSS SKPRIAAIAP 101 TPCGTADCIS SARRRTSLTA SAKFNAPAAT
SAVYSPRLCP ATAAGVLPPA 151 SK*
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 3041>:
TABLE-US-00011 g279.seq 1 atgacgcgga tttgcggctg cttgatttca
acggttttga gtgtttcggc 51 aagtttgtcg gcggcgggtt tcatcaggct
gcaatgggaa ggaacggata 101 ccggcagcgg cagggcgcgt ttggctccgg
cttctttggc ggcagccatg 151 gtgcgtccga cggcggcggc gttgcctgca
atcacgactt gtccgggcga 201 gttgaagttg acggcttcga ccacttcgcc
ctgtgcggat tcggcacaaa 251 tctgcctgac ctgttcatct tccaaaccca
aaatggccgc cattgcgcct 301 acgccttgcg gtacggcgga ctgcatcagt
tcggcgcgca ggcggacgag 351 tttgacggca tcggcaaaat ccaatgcttc
ggcggcgaca agcgcggtgt 401 attcgccgag gctgtgtccg gcaacggcgg
caggcgtttt gccgcccact 451 tccaaatag
This corresponds to the amino acid sequence <SEQ ID 3042; ORF
279.ng>:
TABLE-US-00012 g279.pep 1 MTRICGCLIS TVLSVSASLS AAGFIRLQWE
GTDTGSGRAR LAPASLAAAM 51 VRPTAAALPA ITTCPGELKL TASTTSPCAD
SAQICLTCSS SKPKMAAIAP 101 TPCGTADCIS SARRRTSLTA SAKSNASAAT
SAVYSPRLCP ATAAGVLPPT 151 SK*
ORF 279 shows 89.5% identity over a 152 aa overlap with a predicted
ORF (ORF 279.ng) from N. gonorrhoeae:
TABLE-US-00013 10 20 30 40 50 60 m279.pep
ITRICGCLISTVFRASASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMARPTAAALPA
:|||||||||||: :|||||||||||||||||||||||||||||||||||:||||||||| g279
MTRICGCLISTVLSVSASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMVRPTAAALPA 10 20
30 40 50 60 70 80 90 100 110 120 m279.pep
ITICPGELKLTASTTSLWAASAQMALTCSSSKPRIAAIAPTPCGTADCISSARRRTSLTA ||
||||||||||||| | |||: ||||||||::||||||||||||||||||||||||| g279
ITTCPGELKLTASTTSPCADSAQICLTCSSSKPKMAAIAPTPCGTADCISSARRRTSLTA 70 80
90 100 110 120 130 140 150 m279.pep
SAKFNAPAATSAVYSPRLCPATAAGVLPPASKX ||| || ||||||||||||||||||||||:|||
g279 SAKSNASAATSAVYSPRLCPATAAGVLPPTSKX 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3043>:
TABLE-US-00014 a279.seq 1 ATGACNCNGA TTTGCGGCTG CTTGATTTCA
ACGGTTTNNA GGGCTTCGGC 51 GAGTTTGTCG GCGGCGGGTT TCATGAGGCT
GCAATGGGAA GGTACNGACA 101 CNGGCAGCGG CAGGGCGCGT TTGGCGCCGG
CTTCTTTGGC GGCAAGCATA 151 GCGCGCTCGA CGGCGGCGGC ATTGCCTGCA
ATCACGACTT GTCCGGGCGA 201 GTTGAAGTTG ACGGCTTCAA CCACTTCATC
CTGTGCGGAT TCGGCGCAAA 251 TTTGTTTTAC CTGTTCATCT TCCAAGCCGA
GAATCGCCGC CATTGCGCCC 301 ACGCCTTGCG GTACGGCGGA CTGCATCAGT
TCGGCGCGCA NGCGCACGAG 351 TTTGACCGCG TCGGCAAAAT CCAATGCGCC
GGCGGCAACN AGTGCGGTGT 401 ATTCGCCGAN GCTGTGTCCG GCAACGGCGG
CAGGCGTTTT GCCGCCCGCT 451 TCCGAATAG
This corresponds to the amino acid sequence <SEQ ID 3044; ORF
279.a>:
TABLE-US-00015 a279.pep 1 MTXICGCLIS TVXRASASLS AAGFMRLQWE
GTDTGSGRAR LAPASLAASI 51 ARSTAAALPA ITTCPGELKL TASTTSSCAD
SAQICFTCSS SKPRIAAIAP 101 TPCGTADCIS SARXRTSLTA SAKSNAPAAT
SAVYSPXLCP ATAAGVLPPA 151 SE*
m279/a279 ORFs 279 and 279.a showed a 88.2% identity in 152 aa
overlap
TABLE-US-00016 10 20 30 40 50 60 m279.pep
ITRICGCLISTVFRASASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMARPTAAALPA :|
||||||||| |||||||||||:|||||||||||||||||||||||::|| ||||||| a279
MTXICGCLISTVXRASASLSAAGFMRLQWEGTDTGSGRARLAPASLAASIARSTAAALPA 10 20
30 40 50 60 70 80 90 100 110 120 m279.pep
ITICPGELKLTASTTSLWAASAQMALTCSSSKPRIAAIAPTPCGTADCISSARRRTSLTA ||
||||||||||||| | |||: :||||||||||||||||||||||||||| |||||| a279
ITTCPGELKLTASTTSSCADSAQICFTCSSSKPRIAAIAPTPCGTADCISSARXRTSLTA 70 80
90 100 110 120 130 140 150 m279.pep
SAKFNAPAATSAVYSPRLCPATAAGVLPPASKX ||| |||||||||||| ||||||||||||||:|
a279 SAKSNAPAATSAVYSPXLCPATAAGVLPPASEX 130 140 150
519 and 519-1 gnm7.seq The following partial DNA sequence was
identified in N. meningitidis <SEQ ID 3045>:
TABLE-US-00017 m519.seq (partial) 1 ..TCCGTTATCG GGCGTATGGA
GTTGGACAAA ACGTTTGAAG AACGCGACGA 51 AATCAACAGT ACTGTTGTTG
CGGCTTTGGA CGAGGCGGCC GGGgCTTgGG 101 GTGTGAAGGT TTTGCGTTAT
GAGATTAAAG ACTTGGTTCC GCCGCAAGAA 151 ATCCTTCGCT CAATGCAGGC
GCAAATTACT GCCGAACGCG AAAAACGCGC 201 CCGTATCGCC GAATCCGAAG
GTCGTAAAAT CGAACAAATC AACCTTGCCA 251 GTGGTCAGCG CGAAGCCGAA
ATCCAACAAT CCGAAGGCGA GGCTCAGGCT 301 GCGGTCAATG CGTCAAATGC
CGAGAAAATC GCCCGCATCA ACCGCGCCAA 351 AGGTGAAGCG GAATCCTTGC
GCCTTGTTGC CGAAGCCAAT GCCGAAGCCA 401 TCCGTCAAAT TGCCGCCGCC
CTTCAAACCC AAGGCGGTGC GGATGCGGTC 451 AATCTGAAGA TTGCGGAACA
ATACGTCGCT GCGTTCAACA ATCTTGCCAA 501 AGAAAGCAAT ACGCTGATTA
TGCCCGCCAA TGTTGCCGAC ATCGGCAGCC 551 TGATTTCTGC CGGTATGAAA
ATTATCGACA GCAGCAAAAC CGCCAAaTAA
This corresponds to the amino acid sequence <SEQ ID 3046; ORF
519>:
TABLE-US-00018 m519.pep (partial) 1 ..SVIGRMELDK TFEERDEINS
TVVAALDEAA GAWGVKVLRY EIKDLVPPQE 51 ILRSMQAQIT AEREKRARIA
ESEGRKIEQI NLASGQREAE IQQSEGEAQA 101 AVNASNAEKI ARINRAKGEA
ESLRLVAEAN AEAIRQIAAA LQTQGGADAV 151 NLKIAEQYVA AFNNLAKESN
TLIMPANVAD IGSLISAGMK IIDSSKTAK*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3047>:
TABLE-US-00019 g519.seq 1 atggaatttt tcattatctt gttggcagcc
gtcgccgttt tcggcttcaa 51 atcctttgtc gtcatccccc agcaggaagt
ccacgttgtc gaaaggctcg 101 ggcgtttcca tcgcgccctg acggccggtt
tgaatatttt gattcccttt 151 atcgaccgcg tcgcctaccg ccattcgctg
aaagaaatcc ctttagacgt 201 acccagccag gtctgcatca cgcgcgataa
tacgcaattg actgttgacg 251 gcatcatcta tttccaagta accgatccca
aactcgcctc atacggttcg 301 agcaactaca ttatggcaat tacccagctt
gcccaaacga cgctgcgttc 351 cgttatcggg cgtatggagt tggacaaaac
gtttgaagaa cgcgacgaaa 401 tcaacagtac cgtcgtctcc gccctcgatg
aagccgccgg ggcttggggt 451 gtgaaagtcc tccgttacga aatcaaggat
ttggttccgc cgcaagaaat 501 ccttcgcgca atgcaggcac aaattaccgc
cgaacgcgaa aaacgcgccc 551 gtattgccga atccgaaggc cgtaaaatcg
aacaaatcaa ccttgccagt 601 ggtcagcgtg aagccgaaat ccaacaatcc
gaaggcgagg ctcaggctgc 651 ggtcaatgcg tccaatgccg agaaaatcgc
ccgcatcaac cgcgccaaag 701 gcgaagcgga atccctgcgc cttgttgccg
aagccaatgc cgaagccaac 751 cgtcaaattg ccgccgccct tcaaacccaa
agcggggcgg atgcggtcaa 801 tctgaagatt gcgggacaat acgttaccgc
gttcaaaaat cttgccaaag 851 aagacaatac gcggattaag cccgccaagg
ttgccgaaat cgggaaccct 901 aattttcggc ggcatgaaaa attttcgcca
gaagcaaaaa cggccaaata 951 a
This corresponds to the amino acid sequence <SEQ ID 3048; ORF
519.ng>:
TABLE-US-00020 g519.pep 1 MEFFIILLAA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRA MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAN 251 RQIAAALQTQ SGADAVNLKI AGQYVTAFKN
LAKEDNTRIK PAKVAEIGNP 301 NFRRHEKFSP EAKTAK*
ORF 519 shows 87.5% identity over a 200 aa overlap with a predicted
ORF (ORF 519.ng) from N. gonorrhoeae:
TABLE-US-00021 m519/g519 10 20 30 m519.pep
SVIGRMELDKTFEERDEINSTVVAALDEAA |||||||||||||||||||||||:|||||| g519
YFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAA 90 100
110 120 130 140 40 50 60 70 80 90 m519.pep
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| g519
GAWGVKVLRYEIKDLVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLASGQREAE 150
160 170 180 190 200 100 110 120 130 140 150 m519.pep
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV
||||||||||||||||||||||||||||||||||||||||||| ||||||||||:||||| g519
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEANRQIAAALQTQSGADAV 210
220 230 240 250 260 160 170 180 190 200 m519.pep
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL-ISAGMKIIDSSKTAK |||||
|||:||:|||||:|| | ||:||:||: : |: :|||| g519
NLKIAGQYVTAFKNLAKEDNTRIKPAKVAEIGNPNFRRHEKFSPEAKTAK 270 280 290 300
310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3049>:
TABLE-US-00022 a519.seq 1 ATGGAATTTT TCATTATCTT GCTGGCAGCC
GTCGTTGTTT TCGGCTTCAA 51 ATCCTTTGTT GTCATCCCAC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GTATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAAT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGCAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG AGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
TGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 3050; ORF
519.a>:
TABLE-US-00023 a519.pep 1 MEFFIILLAA VVVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519/a519 ORFs 519 and
519.a showed a 99.5% identity in 199 aa overlap 10 20 30 m519.pep
SVIGRMELDKTFEERDEINSTVVAALDEAA |||||||||||||||||||||||:|||||| a519
YFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAA 90 100
110 120 130 140 40 50 60 70 80 90 m519.pep
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a519
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE 150
160 170 180 190 200 100 110 120 130 140 150 m519.pep
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a519
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV 210
220 230 240 250 260 160 170 180 190 200 m519.pep
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAKX
|||||||||||||||||||||||||||||||||||||||||||||||||| a519
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAKX 270 280 290 300
310
Further work revealed the DNA sequence identified in N.
meningitidis <SEQ ID 3051>:
TABLE-US-00024 m519-1.seq 1 ATGGAATTTT TCATTATCTT GTTGGTAGCC
GTCGCCGTTT TCGGTTTCAA 51 ATCCTTTGTT GTCATCCCAC AACAGGAAGT
CCACGTTGTC GAAAGGCTGG 101 GGCGTTTCCA TCGCGCCCTG ACGGcCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GCATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAGT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGTAC TGTTGTTGCG GCTTTGGACG
AGGCGGCCGG GGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
CGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCTGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 3052; ORF
519-1>:
TABLE-US-00025 m519-1. 1 MEFFIILLVA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVA ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3053>:
TABLE-US-00026 g519-1.seq 1 ATGGAATTTT TCATTATCTT GTTGGCAGCC
GTCGCCGTTT TCGGCTTCAA 51 ATCCTTTGTC GTCATCCCCC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGATAA
TACGCAATTG ACTGTTGACG 251 GCATCATCTA TTTCCAAGTA ACCGATCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCAAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAGT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGTAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG GGCTTGGGGT 451 GTGAAAGTCC TCCGTTACGA AATCAAGGAT
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCGCA ATGCAGGCAC AAATTACCGC
CGAACGCGAA AAACGCGCCC 551 GTATTGCCGA ATCCGAAGGC CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGTG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCCAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GCGAAGCGGA ATCCCTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGGGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTAGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GCATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 3054; ORF
519-1.ng>:
TABLE-US-00027 g519-1.pep 1 MEFFIILLAA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRA MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519-1/g519-1 99.0%
identity in 315 aa overlap 10 20 30 40 50 60 g519-1.pep
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 10 20
30 40 50 60 70 80 90 100 110 120 g519-1.pep
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVIDPKLASYGSSNYIMAITQLAQTTLRSVIG 70 80
90 100 110 120 130 140 150 160 170 180 g519-1.pep
RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRAMQAQITAERE
|||||||||||||||||||:|||||||||||||||||||||||||||||:|||||||||| m519-1
RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 130
140 150 160 170 180 190 200 210 220 230 240 g519-1.pep
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR 190
200 210 220 230 240 250 260 270 280 290 300 g519-1.pep
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL 250
260 270 280 290 300 310 g519-1.pep ISAGMKIIDSSKTAKX
|||||||||||||||| m519-1 ISAGMKIIDSSKTAKX 310
The following DNA sequence was identified in N. meningitidis
<SEQ ID 3055>:
TABLE-US-00028 a519-1.seq 1 ATGGAATTTT TCATTATCTT GCTGGCAGCC
GTCGTTGTTT TCGGCTTCAA 51 ATCCTTTGTT GTCATCCCAC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GTATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAAT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGCAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG AGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
TGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 3056; ORF
519-1.a>:
TABLE-US-00029 a519-1.pep. 1 MEFFIILLAA VVVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519-1/a519-1 ORFs
519-1 and 519-1.a showed a 99.0% identity in 315 aa overlap 10 20
30 40 50 60 a519-1.pep
MEFFIILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL
||||||||:||:|||||||||||||||||||||||||||||||||||||||||||||||| m519-1
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 10 20
30 40 50 60 70 80 90 100 110 120 a519-1.pep
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 70 80
90 100 110 120 130 140 150 160 170 180 a519-1.pep
RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| m519-1
RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 130
140 150 160 170 180 190 200 210 220 230 240 a519-1.pep
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR 190
200 210 220 230 240 250 260 270 280 290 300 a519-1.pep
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL 250
260 270 280 290 300 310 a519-1.pep ISAGMKIIDSSKTAKX
|||||||||||||||| m519-1 ISAGMKIIDSSKTAKX 310
576 and 576-1 gnm22.seq The following partial DNA sequence was
identified in N. meningitidis <SEQ ID 3057>:
TABLE-US-00030 m576.seq.. (partial) 1 ..ATGCAGCAGG CAAGCTATGC
GATGGGCGTG GACATCGGAC GCTCCCTGAA 51 GCAAATGAAG GAACAGGGCG
CGGAAATCGA TTTGAAAGTC TTTACCGAAG 101 CCATGCAGGC AGTGTATGAC
GGCAAAGAAA TCAAAATGAC CGAAGAGCAG 151 GCTCAGGAAG TCATGATGAA
ATTCCTTCAG GAACAACAGG CTAAAGCCGT 201 AGAAAAACAC AAGGCGGACG
CGAAGGCCAA TAAAGAAAAA GGCGAAGCCT 251 TTCTGAAAGA AAATGCCGCC
AAAGACGGCG TGAAGACCAC TGCTTCCGGC 301 CTGCAATACA AAATCACCAA
ACAGGGCGAA GGCAAACAGC CGACCAAAGA 351 CGACATCGTT ACCGTGGAAT
ACGAAGGCCG CCTGATTGAC GGTACGGTAT 401 TCGACAGCAG CAAAGCCAAC
GGCGGCCCGG TCACCTTCCC TTTGAGCCAA 451 GTGATTCCGG GTTGGACCGA
AGgCGTACAG CTTCTGAAAG AAGGCGGCGA 501 AGCCACGTTC TACATCCCGT
CCAACCTTGC CTACCGCGAA CAGGGTGCGG 551 GCGACAAAAT CGGTCCGAAC
GCCACTTTGG TATTTGATGT GAAACTGGTC 601 AAAATCGGCG CACCCGAAAA
CGCGCCCGCC AAGCAGCCGG CTCAAGTCGA 651 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 3058; ORF
576>:
TABLE-US-00031 m576.pep.. (partial) 1 ..MQQASYAMGV DIGRSLKQMK
EQGAEIDLKV FTEAMQAVYD GKEIKMTEEQ 51 AQEVMMKFLQ EQQAKAVEKH
KADAKANKEK GEAFLKENAA KDGVKTTASG 101 LQYKITKQGE GKQPTKDDIV
TVEYEGRLID GTVFDSSKAN GGPVTFPLSQ 151 VIPGWTEGVQ LLKEGGEATF
YIPSNLAYRE QGAGDKIGPN ATLVFDVKLV 201 KIGAPENAPA KQPAQVDIKK VN*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3059>:
TABLE-US-00032 g576.seq.. (partial) 1 ..atgggcgtgg acatcggacg
ctccctgaaa caaatgaagg aacagggcgc 51 ggaaatcgat ttgaaagtct
ttaccgatgc catgcaggca gtgtatgacg 101 gcaaagaaat caaaatgacc
gaagagcagg cccaggaagt gatgatgaaa 151 ttcctgcagg agcagcaggc
taaagccgta gaaaaacaca aggcggatgc 201 gaaggccaac aaagaaaaag
gcgaagcctt cctgaaggaa aatgccgccg 251 aagacggcgt gaagaccact
gcttccggtc tgcagtacaa aatcaccaaa 301 cagggtgaag gcaaacagcc
gacaaaagac gacatcgtta ccgtggaata 351 cgaaggccgc ctgattgacg
gtaccgtatt cgacagcagc aaagccaacg 401 gcggcccggc caccttccct
ttgagccaag tgattccggg ttggaccgaa 451 ggcgtacggc ttctgaaaga
aggcggcgaa gccacgttct acatcccgtc 501 caaccttgcc taccgcgaac
agggtgcggg cgaaaaaatc ggtccgaacg 551 ccactttggt atttgacgtg
aaactggtca aaatcggcgc acccgaaaac 601 gcgcccgcca agcagccgga
tcaagtcgac atcaaaaaag taaattaa
This corresponds to the amino acid sequence <SEQ ID 3060; ORF
576.ng>:
TABLE-US-00033 g576.pep.. (partial) 1 ..MGVDIGRSLK QMKEQGAEID
LKVFTDAMQA VYDGKEIKMT EEQAQEVMMK 51 FLQEQQAKAV EKHKADAKAN
KEKGEAFLKE NAAEDGVKTT ASGLQYKITK 101 QGEGKQPTKD DIVTVEYEGR
LIDGTVFDSS KANGGPATFP LSQVIPGWTE 151 GVRLLKEGGE ATFYIPSNLA
YREQGAGEKI GPNATLVFDV KLVKIGAPEN 201 APAKQPDQVD IKKVN*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00034 m576/g576 97.2% identity in 215 aa overlap 10 20 30
40 50 60 m576.pep
MQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQ
|||||||||||||||||||||||||:||||||||||||||||||||||||||| g576
MGVDIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQEVMMKFLQ 10 20 30 40
50 70 80 90 100 110 120 m576.pep
EQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIV
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||| g576
EQQAKAVEKHKADAKANKEKGEAFLKENAAEDGVKTTASGLQYKITKQGEGKQPTKDDIV 60 70
80 90 100 110 130 140 150 160 170 180 m576.pep
TVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYRE
|||||||||||||||||||||||:|||||||||||||||:|||||||||||||||||||| g576
TVEYEGRLIDGTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEATFYIPSNLAYRE 120
130 140 150 160 170 190 200 210 220 m576.pep
QGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX
||||:|||||||||||||||||||||||||||| ||||||||| g576
QGAGEKIGPNATLVFDVKLVKIGAPENAPAKQPDQVDIKKVNX 180 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3061>:
TABLE-US-00035 a576.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCTGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGCCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 3062; ORF
576.a>:
TABLE-US-00036 a576.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VILGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN* m576/a576 99.5%
identity in 222 aa overlap 10 20 30 m576.pep
MQQASYAMGVDIGRSLKQMKEQGAEIDLKV |||||||||||||||||||||||||||||| a576
CGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKV 30 40
50 60 70 80 40 50 60 70 80 90 m576.pep
FTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
FTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAA 90 100
110 120 130 140 100 110 120 130 140 150 m576.pep
KDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
KDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQ 150
160 170 180 190 200 160 170 180 190 200 210 m576.pep
VIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPA ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
VILGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPA 210
220 230 240 250 260 220 m576.pep KQPAQVDIKKVNX ||||||||||||| a576
KQPAQVDIKKVNX 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3063>:
TABLE-US-00037 m576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCCGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGTCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 3064; ORF
576-1>:
TABLE-US-00038 m576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VIPGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3065>:
TABLE-US-00039 g576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTGCCGCG CAGGGCGACA
CCTCTTCAAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC AATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 ACAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGATG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCCCAGGAAG TGATGATGAA ATTCCTGCAG
GAGCAGCAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGATG CGAAGGCCAA
CAAAGAAAAA GGCGAAGCCT 401 TCCTGAAGGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGT 451 CTGCAGTACA AAATCACCAA ACAGGGTGAA
GGCAAACAGC CGACAAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACCGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
CCACCTTCCC TTTGAGCCAA 601 GTGATTCCGG GTTGGACCGA AGGCGTACGG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGAAAAAAT CGGTCCGAAC GCCACTTTGG
TATTTGACGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG ATCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 3066; ORF
576-1.ng>:
TABLE-US-00040 g576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASAA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTDAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPATFPLSQ 201 VIPGWTEGVR LLKEGGEATF YIPSNLAYRE
QGAGEKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPDQVDIKK VN* g576-1/m576-1
ORFa 576-1 and 567-1.a showed a 97.8% identity in 272 aa overlap 10
20 30 40 50 60 g576-1.pep
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDTSSIGSTMQQASYAMGV
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m576-1
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV 10 20
30 40 50 60 70 80 90 100 110 120 g576-1.pep
DIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| m576-1
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH 70 80
90 100 110 120 130 140 150 160 170 180 g576-1.pep
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID 130
140 150 160 170 180 190 200 210 220 230 240 g576-1.pep
GTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEATFYIPSNLAYREQGAGEKIGPN
|||||||||||||:|||||||||||||||:||||||||||||||||||||||||:||||| m576-1
GTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN 190
200 210 220 230 240 250 260 270 g576-1.pep
ATLVFDVKLVKIGAPENAPAKQPDQVDIKKVNX ||||||||||||||||||||||| |||||||||
m576-1 ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX 250 260 270
The following DNA sequence was identified in N. meningitidis
<SEQ ID 3067>:
TABLE-US-00041 a576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCTGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGCCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 3068; ORF
576-1.a>:
TABLE-US-00042 a576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VILGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN* a576-1/m576-1
99.6% identity in 272 aa overlap 10 20 30 40 50 60 a576-1.pep
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV 10 20
30 40 50 60 70 80 90 100 110 120 a576-1.pep
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH 70 80
90 100 110 120 130 140 150 160 170 180 a576-1.pep
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID 130
140 150 160 170 180 190 200 210 220 230 240 a576-1.pep
GTVFDSSKANGGPVTFPLSQVILGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| m576-1
GTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN 190
200 210 220 230 240 250 260 270 a576-1.pep
ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX |||||||||||||||||||||||||||||||||
m576-1 ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX 250 260 270
919 gnm43.seq The following partial DNA sequence was identified in
N. meningitidis <SEQ ID 3069>:
TABLE-US-00043 m919.seq 1 ATGAAAAAAT ACCTATTCCG CGCCGCCCTG
TACGGCATCG CCGCCGCCAT 51 CCTCGCCGCC TGCCAAAGCA AGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
TCGGCATCCC CGACCCCGCC 151 GGAACGACGG TCGGCGGCGG CGGGGCCGTC
TATACCGTTG TACCGCACCT 201 GTCCCTGCCC CACTGGGCGG CGCAGGATTT
CGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTCCAT
TCCTTTCAGG CAAAACAGTT 351 TTTTGAACGC TATTTCACGC CGTGGCAGGT
TGCAGGCAAC GGAAGCCTTG 401 CCGGTACGGT TACCGGCTAT TACGAACCGG
TGCTGAAGGG CGACGACAGG 451 CGGACGGCAC AAGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCC CTGCCTGCCG GTTTGCGGAG
CGGAAAAGCC CTTGTCCGCA 551 TCAGGCAGAC GGGAAAAAAC AGCGGCACAA
TCGACAATAC CGGCGGCACA 601 CATACCGCCG ACCTCTCCcG ATTCCCCATC
ACCGCGCGCA CAACAGCAAT 651 CAAAGGCAGG TTTGAAGGAA GCCGCTTCCT
CCCCTACCAC ACGCGCAACC 701 AAATCAACGG CGGCGCGCTT GACGGCAAAG
CCCCGATACT CGGTTACGCC 751 GAAGACCCTG TCGAACTTTT TTTTATGCAC
ATCCAAGGCT CGGGCCGTCT 801 GAAAACCCCG TCCGGCAAAT ACATCCGCAT
CGGCTATGCC GACAAAAACG 851 AACATCCyTA CGTTTCCATC GGACGCTATA
TGGCGGATAA GGGCTACCTC 901 AAACTCGGAC AAACCTCCAT GCAGGGCATT
AAGTCTTATA TGCGGCAAAA 951 TCCGCAACGC CTCGCCGAAG TTTTGGGTCA
AAACCCCAGC TATATCTTTT 1001 TCCGCGAGCT TGCCGGAAGC AGCAATGACG
GCCCTGTCGG CGCACTGGGC 1051 ACGCCGCTGA TGGGGGAATA TGCCGGCGCA
GTCGACCGGC ACTACATTAC 1101 CTTGGGTGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CCGGCAGCGC GATTAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGATAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATATGT
CTGGCAGCTC CTACCCAACG 1301 GTATGAAGCC CGAATACCGc CCGTAA
This corresponds to the amino acid sequence <SEQ ID 3070; ORF
919>:
TABLE-US-00044 m919.pep 1 MKKYLFRAAL YGIAAAILAA CQSKSIQTFP
QPDTSVINGP DRPVGIPDPA 51 GTTVGGGGAV YTVVPHLSLP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SFQAKQFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDDR 151 RTAQARFPIY GIPDDFISVP LPAGLRSGKA
LVRIRQTGKN SGTIDNTGGT 201 HTADLSRFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KSYMRQNPQR LAEVLGQNPS
YIFFRELAGS SNDGPVGALG 351 TPLMGEYAGA VDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG 401 AVRVDYFWGY GDEAGELAGK QKTTGYVWQL
LPNGMKPEYR P*
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 3071>:
TABLE-US-00045 g919.seq 1 ATGAAAAAAC ACCTGCTCCG CTCCGCCCTG
TACGGcatCG CCGCCgccAT 51 CctcgCCGCC TGCCAAAgca gGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
CCGGCATCCC CGACCCCGCC 151 GGAACGACGG TTGCCGGCGG CGGGGCCGTC
TATACCGTTG TGCCGCACCT 201 GTCCATGCCC CACTGGGCGG CGCaggATTT
TGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTGCAT
TCCTTTCAGG CAAAGcGgTT 351 TTTTGAACGC TATTTCACGC cgtGGCaggt
tgcaggcaAC GGAAGcCTTG 401 Caggtacggt TACCGGCTAT TACGAACCGG
TGCTGAAGGG CGACGGCAGG 451 CGGACGGAAC GGGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCG CTGCCTGCCG GTTTGCGGGG
CGGAAAAAAC CTTGTCCGCA 551 TCAGGCAGac ggGGAAAAAC AGCGGCACGA
TCGACAATGC CGGCGGCACG 601 CATACCGCCG ACCTCTCCCG ATTCCCCATC
ACCGCGCGCA CAACGGcaat 651 caaaGGCAGG TTTGAaggAA GCCGCTTCCT
CCCTTACCAC ACGCGCAACC 701 AAAtcaacGG CGGCgcgcTT GACGGCAAag
cccCCATCCT CggttacgcC 751 GAagaccCcG tcgaacttTT TTTCATGCAC
AtccaaggCT CGGGCCGCCT 801 GAAAACCCcg tccggcaaat acatCCGCAt
cggaTacgcc gacAAAAACG 851 AACAtccgTa tgtttccatc ggACGctaTA
TGGCGGACAA AGGCTACCTC 901 AAGctcgggc agACCTCGAT GCAGGgcatc
aaagcCTATA TGCGGCAAAA 951 TCCGCAACGC CTCGCCGAAG TTTTGGGTCA
AAACCCCAGC TATATCTTTT 1001 TCCGCGAGCT TGCCGGAAGC GGCAATGAGG
GCCCCGTCGG CGCACTGGGC 1051 ACGCCACTGA TGGGGGAATA CGCCGGCGCA
ATCGACCGGC ACTACATTAC 1101 CTTGGGCGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CAGGCAGCGC GATCAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGTTAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATACGT
CTGGCAGCTC CTGCCCAACG 1301 GCATGAAGCC CGAATACCGC CCGTGA
This corresponds to the amino acid sequence <SEQ ID 3072; ORF
919.ng>:
TABLE-US-00046 g919.pep 1 MKKHLLRSAL YGIAAAILAA CQSRSIQTFP
QPDTSVINGP DRPAGIPDPA 51 GTTVAGGGAV YTVVPHLSMP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SFQAKRFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDGR 151 RTERARFPIY GIPDDFISVP LPAGLRGGKN
LVRIRQTGKN SGTIDNAGGT 201 HTADLSRFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KAYMRQNPQR LAEVLGQNPS
YIFFRELAGS GNEGPVGALG 351 TPLMGEYAGA IDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG 401 AVRVDYFWGY GDEAGELAGK QKTTGYVWQL
LPNGMKPEYR P*
ORF 919 shows 95.9% identity over a 441 aa overlap with a predicted
ORF (ORF 919.ng) from N. gonorrhoeae:
TABLE-US-00047 m919/g919 10 20 30 40 50 60 m919.pep
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAV
|||:|:|:|||||||||||||||:|||||||||||||||||||:||||||||||:||||| g919
MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPAGIPDPAGTIVAGGGAV 10 20
30 40 50 60 70 80 90 100 110 120 m919.pep
YTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKQFFER
||||||||:||||||||||||||||||||||||||||||||||||||||||||||:|||| g919
YTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKRFFER 70 80
90 100 110 120 130 140 150 160 170 180 m919.pep
YFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKA
|||||||||||||||||||||||||||| ||| :||||||||||||||||||||||:|| g919
YFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKN 130
140 150 160 170 180 190 200 210 220 230 240 m919.pep
LVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g919
LVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL 190
200 210 220 230 240 250 260 270 280 290 300 m919.pep
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g919
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL 250
260 270 280 290 300 310 320 330 340 350 360 m919.pep
KLGQISMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALGTPLMGEYAGA
|||||||||||:||||||||||||||||||||||||||||:|:||||||||||||||||| g919
KLGQISMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGNEGPVGALGTPLMGEYAGA 310
320 330 340 350 360 370 380 390 400 410 420 m919.pep
VDRHYITLGAPLFVATAHPVIRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g919
IDRHYITLGAPLFVATAHPVIRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK 370
380 390 400 410 420 430 440 m919.pep QKTTGYVWQLLPNGMKPEYRPX
|||||||||||||||||||||| g919 QKTTGYVWQLLPNGMKPEYRPX 430 440
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3073>:
TABLE-US-00048 a919.seq 1 ATGAAAAAAT ACCTATTCCG CGCCGCCCTG
TGCGGCATCG CCGCCGCCAT 51 CCTCGCCGCC TGCCAAAGCA AGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
TCGGCATCCC CGACCCCGCC 151 GGAACGACGG TCGGCGGCGG CGGGGCCGTT
TATACCGTTG TGCCGCACCT 201 GTCCCTGCCC CACTGGGCGG CGCAGGATTT
CGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTCCAT
TCCGTTCAGG CAAAACAGTT 351 TTTTGAACGC TATTTCACGC CGTGGCAGGT
TGCAGGCAAC GGAAGCCTTG 401 CCGGTACGGT TACCGGCTAT TACGAGCCGG
TGCTGAAGGG CGACGACAGG 451 CGGACGGCAC AAGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCC CTGCCTGCCG GTTTGCGGAG
CGGAAAAGCC CTTGTCCGCA 551 TCAGGCAGAC GGGAAAAAAC AGCGGCACAA
TCGACAATAC CGGCGGCACA 601 CATACCGCCG ACCTCTCCCA ATTCCCCATC
ACTGCGCGCA CAACGGCAAT 651 CAAAGGCAGG TTTGAAGGAA GCCGCTTCCT
CCCCTACCAC ACGCGCAACC 701 AAATCAACGG CGGCGCGCTT GACGGCAAAG
CCCCGATACT CGGTTACGCC 751 GAAGACCCCG TCGAACTTTT TTTTATGCAC
ATCCAAGGCT CGGGCCGTCT 801 GAAAACCCCG TCCGGCAAAT ACATCCGCAT
CGGCTATGCC GACAAAAACG 851 AACATCCCTA CGTTTCCATC GGACGCTATA
TGGCGGACAA AGGCTACCTC 901 AAGCTCGGGC AGACCTCGAT GCAGGGCATC
AAAGCCTATA TGCAGCAAAA 951 CCCGCAACGC CTCGCCGAAG TTTTGGGGCA
AAACCCCAGC TATATCTTTT 1001 TCCGAGAGCT TACCGGAAGC AGCAATGACG
GCCCTGTCGG CGCACTGGGC 1051 ACGCCGCTGA TGGGCGAGTA CGCCGGCGCA
GTCGACCGGC ACTACATTAC 1101 CTTGGGCGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CCGGCAGCGC GATTAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGATAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATATGT
CTGGCAGCTT CTGCCCAACG 1301 GTATGAAGCC CGAATACCGC CCGTAA
This corresponds to the amino acid sequence <SEQ ID 3074; ORF
919.a>:
TABLE-US-00049 a919.pep 1 MKKYLFRAAL CGIAAAILAA CQSKSIQTFP
QPDTSVINGP DRPVGIPDPA 51 GTTVGGGGAV YTVVPHLSLP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SVQAKQFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDDR 151 RTAQARFPIY GIPDDFISVP LPAGLRSGKA
LVRIRQTGKN SGTIDNTGGT 201 HTADLSQFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KAYMQQNPQR LAEVLGQNPS
YIFFRELTGS SNDGPVGALG 351 TPLMGEYAGA VDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG 401 AVRVDYFWGY GDEAGELAGK QKTTGYVWQL
LPNGMKPEYR P* m919/a919 98.6% identity in 441 aa overlap 10 20 30
40 50 60 m919.pep
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAV
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| a919
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAV 10 20
30 40 50 60 70 80 90 100 110 120 m919.pep
YTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKQFFER
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| a919
YTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSVQAKQFFER 70 80
90 100 110 120 130 140 150 160 170 180 m919.pep
YFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
YFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKA 130
140 150 160 170 180 190 200 210 220 230 240 m919.pep
LVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a919
LVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL 190
200 210 220 230 240 250 260 270 280 290 300 m919.pep
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL 250
260 270 280 290 300 310 320 330 340 350 360 m919.pep
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALGTPLMGEYAGA
|||||||||||:||:||||||||||||||||||||||:|||||||||||||||||||||| a919
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALGTPLMGEYAGA 310
320 330 340 350 360 370 380 390 400 410 420 m919.pep
VDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
VDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK 370
380 390 400 410 420 430 440 m919.pep QKTTGYVWQLLPNGMKPEYRPX
|||||||||||||||||||||| a919 QKTTGYVWQLLPNGMKPEYRPX 430 440
121 and 121-1 The following partial DNA sequence was identified in
N. meningitidis <SEQ ID 3075>:
TABLE-US-00050 m121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CCAATTGCTG 151 GATTTGCAGG ACACAGGCGC AGACGAACTG
CACCGCAGCA GGATTTTGTC 201 GCAAGAACTC AGCCGCCTAT ATGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCACCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTTAC
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 401 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 451 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 501 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 551 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 601 xxxxxxCAGC TTCCTTACGA CAAAAACGGT
GCAAAGTCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACGCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCAT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGTTTT ACCGCGCAAA CCGTTTGCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGACG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAC CTGAACCTCG ATCCGCAATG
GGTGGAAGCC GCCGnATTTG 1001 CGTGGTTGGC GGCGTGTTGG ATTAATCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
AnCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 3076; ORF
121>:
TABLE-US-00051 m121.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRQLL 51 DLQDTGADEL HRSRILSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL Axxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 151 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 201 xxQLPYDKNG AKSAQGNILP QLLDRLLAHP
YFAQRHPKST GRELFAINWL 251 ETYLDGGENR YDVLRTLSRF TAQTVCDAVS
HAAADARQMY ICDGGIRNPV 301 LMADLAECFG TRVSLHSTAD LNLDPQWVEA
AXFAWLAACW INRIPGSPHK 351 ATGASKPCIL XAGYYY*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3077>:
TABLE-US-00052 g121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATTATG
TCGGGAACCA GTATGGACGG 51 GGCGGATGCC GTGCTGGTAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCTGACC
GGTTGCGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCAC AGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCTCCGTGC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTtac
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACTGa cgcggatttT
TACCGTCggc gacttcCGCA 401 GCCGCGACCT TGCTGCCGGC GGacaAGGTG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA TGACAGGGAA
ACACGCGTGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGGCGCA CCCGCCTTCG 551 GCTTCGACAC AGGGCCGGGC AATATGCTGA
TGGAcgcgtg gacgcaggca 601 cacTGGcagc TGCCTTACGA CAAAAacggt
gcAAAGgcgg cacAAGGCAA 651 catatTGCcg cAACTGCTCG gcaggctGCT
CGCCcaccCG TATTTCTCAC 701 AACCCcaccc aaAAAGCACG GGgcGCGaac
TgtttgcccT AAattggctc 751 gaaacctAcc ttgacggcgg cgaaaaccga
tacgacgtat tgcggacgct 801 ttcccgattc accgcgcaaA ccgTttggga
cgccgtctca CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCTCAATG
GGTGGAGGCG gccgCATTtg 1001 cgtggttggC GGCGTGTTGG ATTAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCGACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 3078; ORF
121.ng>:
TABLE-US-00053 g121.pep 1 METQLYIGIM SGTSMDGADA VLVRMDGGKW
LGAEGHAFTP YPDRLRRKLL 51 DLQDTGTDEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPC DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL AELTRIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRVVLNIGGI ANISVLPPGA
PAFGFDTGPG NMLMDAWTQA 201 HWQLPYDKNG AKAAQGNILP QLLGRLLAHP
YFSQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVWDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWLAACW INRIPGSPHK 351 ATGASKPCIL GAGYYY*
ORF 121 shows 73.5% identity over a 366 aa overlap with a predicted
ORF (ORF121.ng) from N. gonorrhoeae:
TABLE-US-00054 m121/g121 10 20 30 40 50 60 m121.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
||||||||||||||||||||||:||||||||||||||||||| ||||:||||||||:||| g121
METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDRLRRKLLDLQDTGTDEL 10 20
30 40 50 60 70 80 90 100 110 120 m121.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||| |||||||||||||||||||||||||||||| g121
HRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTVRHAPEHGYSIQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121.pep
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | : :
: g121 AELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRVVLNIGGIANISVLPPGA
130 140 150 160 170 180 190 200 210 220 230 240 m121.pep
XXXXXXXXXXXXXXXXXXXXXXQLPYDKNGAKSAQGNILPQLLDRLLAHPYFAQRHPKST : :
||||||||||:|||||||||| ||||||||:| ||||| g121
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLGRLLAHPYFSQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121.pep
GRELFAINWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICDGGIRNPV
||||||:|||||||||||||||||||||||||||| |||||||||||||||| ||||||| g121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVWDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||||||||||||||||||||||||||| g121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWLAACWINRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121.pep XAGYYYX |||||| g121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3079>:
TABLE-US-00055 a121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCGC GGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCGCCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCAGAC ACGCGCCGGA ACACAGTTAC
AGCGTACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CTCAGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CGACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGACCGGGC AATATGCTGA
TGGACGCGTG GATGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGATTC ACCGCGCAAA CCGTTTTCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCGCAATG
GGTAGAAGCC GCCGCGTTCG 1001 CATGGATGGC GGCGTGTTGG GTCAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 3080; ORF
121.a>:
TABLE-US-00056 a121.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRKLL 51 DLQDTGADEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHSY SVQLADLPLL AERTQIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWMQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVFDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWMAACW VNRIPGSPHK 351 ATGASKPCIL GAGYYY* m121/a121 74.0%
identity in 366 aa overlap 10 20 30 40 50 60 m121.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a121
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRKLLDLQDTGADEL 10 20
30 40 50 60 70 80 90 100 110 120 m121.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||||||||||||||||||||||:||:|||||||| a121
HRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHSYSVQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121.pep
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | : :
: a121 AERTQIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRAVLNIGGIANISVLPPDA
130 140 150 160 170 180 190 200 210 220 230 240 m121.pep
XXXXXXXXXXXXXXXXXXXXXXQLPYDKNGAKSAQGNILPQLLDRLLAHPYFAQRHPKST :
||||||||||:||||||||||||||||||||| ||||| a121
PAFGFDTGPGNMLMDAWMQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121.pep
GRELFAINWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICDGGIRNPV
||||||:|||||||||||||||||||||||||||| |||||||||||||||| ||||||| a121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVFDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||:||||:||||||||||||||||||| a121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWMAACWVNRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121.pep XAGYYYX |||||| a121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3081>:
TABLE-US-00057 m121-1.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CCAATTGCTG 151 GATTTGCAGG ACACAGGCGC AGACGAACTG
CACCGCAGCA GGATTTTGTC 201 GCAAGAACTC AGCCGCCTAT ATGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCACCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTTAC
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CGCGGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCACTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CAACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGGCCGGGC AATATGCTGA
TGGACGCGTG GACGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGTTTT ACCGCGCAAA CCGTTTGCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAC CTGAACCTCG ATCCGCAATG
GGTGGAAGCC GCCGNATTTG 1001 CGTGGTTGGC GGCGTGTTGG ATTAATCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
ANCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 3082; ORF
121-1>:
TABLE-US-00058 m121-1.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRQLL 51 DLQDTGADEL HRSRILSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL AERTRIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDNRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWTQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVCDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAD LNLDPQWVEA
AXFAWLAACW INRIPGSPHK 351 ATGASKPCIL XAGYYY* m121-1/g121 95.6%
identity in 366 aa overlap 10 20 30 40 50 60 m121-1.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
||||||||||||||||||||||:||||||||||||||||||| ||||:||||||||:||| g121
METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDRLRRKLLDLQDTGTDEL 10 20
30 40 50 60 70 80 90 100 110 120 m121-1.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||| |||||||||||||||||||||||||||||| g121
HRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTVRHAPEHGYSIQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121-1.pep
AERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRETRAVLNIGGIANISVLPPDA ||
||||||||||||||||||||||||||||||||||:||||:||||||||||||||| | g121
AELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRVVLNIGGIANISVLPPGA 130
140 150 160 170 180 190 200 210 220 230 240 m121-1.pep
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST
||||||||||||||||||||||||||||||||||||||||||| ||||||||:||||||| g121
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLGRLLAHPYFSQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121-1.pep
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICGGGIRNPV
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| g121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVWDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121-1.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||||||||||||||||||||||||||| g121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWLAACWINRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121-1.pep XAGYYYX |||||| g121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3083>:
TABLE-US-00059 a121-1.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCGC GGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCGCCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCAGAC ACGCGCCGGA ACACAGTTAC
AGCGTACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CTCAGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CGACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGACCGGGC AATATGCTGA
TGGACGCGTG GATGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGATTC ACCGCGCAAA CCGTTTTCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCGCAATG
GGTAGAAGCC GCCGCGTTCG 1001 CATGGATGGC GGCGTGTTGG GTCAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 3084; ORF
121-1.a>:
TABLE-US-00060 a121-1.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRKLL 51 DLQDTGADEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHSY SVQLADLPLL AERTQIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWMQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVFDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWMAACW VNRIPGSPHK 351 ATGASKPCIL GAGYYY* m121-1/a121-1 96.4%
identity in 366 aa overlap 10 20 30 40 50 60 m121-1.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a121-1
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRKLLDLQDTGADEL 10 20
30 40 50 60 70 80 90 100 110 120 m121-1.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||||||||||||||||||||||:||:|||||||| a121-1
HRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHSYSVQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121-1.pep
AERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRETRAVLNIGGIANISVLPPDA
||||:||||||||||||||||||||||||||||||||:|||||||||||||||||||||| a121-1
AERTQIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRAVLNIGGIANISVLPPDA 130
140 150 160 170 180 190 200 210 220 230 240 m121-1.pep
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| a121-1
PAFGFDTGPGNMLMDAWMQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121-1.pep
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICGGGIRNPV
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| a121-1
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVFDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121-1.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||:||||:||||||||||||||||||| a121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWMAACWVNRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121-1.pep XAGYYYX |||||| a121 GAGYYYX
128 and 128-1 The following partial DNA sequence was identified in
N. meningitidis <SEQ ID 3085>:
TABLE-US-00061 m128.seq (partial) 1 ATGACTGACA ACGCACTGCT
CCATTTGGGC GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA
AACCCGCCCT GCAAACCGCC ATCGCCGAAG 101 CGCGCGAACA AATCGCCGCC
ATCAAAGCCC AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC
CGGCATCACC GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA
ACTGCGTCGC CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG
CCCGAAATCA CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA
CAACCGCTTC AAAACCATCA AAAATTCCCC 351 CGAATTCGAC ACCCTCTCCC
CCGCACAAAA AACCAAACTC AACCAC 1 TACGCCAGCG AAAAACTGCG CGAAGCCAAA
TACGCGTTCA GCGAAACCGA 51 wGTCAAAAAA TAyTTCCCyG TCGGCAAwGT
ATTAAACGGA CTGTTCGCCC 101 AAmTCAAAAA ACTmTACGGC ATCGGATTTA
CCGAAAAAAC yGTCCCCGTC 151 TGGCACAAAG ACGTGCGCTA TTkTGAATTG
CAACAAAACG GCGAAmCCAT 201 AGGCGGCGTT TATATGGATT TGTACGCACG
CGAAGGCAAA CGCGGCGGCG 251 CGTGGATGAA CGACTACAAA GGCCGCCGCC
GTTTTTCAGA CGGCACGCTG 301 CAAyTGCCCA CCGCCTACCT CGTCTGCAAC
TTCGCCCCAC CCGTCGGCGG 351 CAGGGAAGCC CGCyTGAGCC ACGACGAAAT
CCTCATCCTC TTCCACGAAA 401 CCGGACACGG GCTGCACCAC CTGCTTACCC
AAGTGGACGA ACTGGGCGTA 451 TCCGGCATCA ACGGCGTAkA ATGGGACGCG
GTCGAACTGC CCAGCCAGTT 501 TATGGAAAAT TTCGTTTGGG AATACAATGT
CTTGGCACAA mTGTCAGCCC 551 ACGAAGAAAC CGGcgTTCCC yTGCCGAAAG
AACTCTTsGA CAAAwTGCTC 601 GCCGCCAAAA ACTTCCAAsG CGGCATGTTC
yTsGTCCGGC AAwTGGAGTT 651 CGCCCTCTTT GATATGATGA TTTACAGCGA
AGACGACGAA GGCCGTCTGA 701 AAAACTGGCA ACAGGTTTTA GACAGCGTGC
GCAAAAAAGT CGCCGTCATC 751 CAGCCGCCCG AATACAACCG CTTCGCCTTG
AGCTTCGGCC ACATCTTCGC 801 AGGCGGCTAT TCCGCAGCTn ATTACAGCTA
CGCGTGGGCG GAAGTATTGA 851 GCGCGGACGC ATACGCCGCC TTTGAAGAAA
GCGACGATGT CGCCGCCACA 901 GGCAAACGCT TTTGGCAGGA AATCCTCGCC
GTCGGGGnAT CGCGCAGCGG 951 nGCAGAATCC TTCAAAGCCT TCCGCGGCCG
CGAACCGAGC ATAGACGCAC 1001 TCTTGCGCCA CAGCGGTTTC GACAACGCGG
TCTGA
This corresponds to the amino acid sequence <SEQ ID 3086; ORF
128>:
TABLE-US-00062 m128.pep (partial) 1 MTDNALLHLG EEPRFDQIKT
EDIKPALQTA IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV
SHLNCVADTP ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD
TLSPAQKTKL NH // 1 YASEKLREAK YAFSETXVKK YFPVGXVLNG LFAQXKKLYG
IGFTEKTVPV 51 WHKDVRYXEL QQNGEXIGGV YMDLYAREGK RGGAWMNDYK
GRRRFSDGTL 101 QLPTAYLVCN FAPPVGGREA RLSHDEILIL FHETGHGLHH
LLTQVDELGV 151 SGINGVXWDA VELPSQFMEN FVWEYNVLAQ XSAHEETGVP
LPKELXDKXL 201 AAKNFQXGMF XVRQXEFALF DMMIYSEDDE GRLKNWQQVL
DSVRKKVAVI 251 QPPEYNRFAL SFGHIFAGGY SAAXYSYAWA EVLSADAYAA
FEESDDVAAT 301 GKRFWQEILA VGXSRSGAES FKAFRGREPS IDALLRHSGF
DNAV*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3087>:
TABLE-US-00063 g128.seq 1 atgattgaca acgCActgct ccacttgggc
gaagaaccCC GTTTTaatca 51 aatccaaacc gaagACAtca AACCCGCCGT
CCAAACCGCC ATCGCCGAAG 101 CGCGCGGACA AATCGCCGCC GTCAAAGCGC
AAACGCACAC CGGCTGGGCG 151 AACACCGTCG AGCGTCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTCGTG TCCCATCTCA ACTCCGTCGT
CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG CCTGAAATCA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAACTGTA CAACCGCTTC
AAAACCATCA AAAATTCCCC 351 CGAATTTGCA ACGCTTTCCC CCGCACAAAA
AACCAAGCTC GATCACGACC 401 TGCGCGATTT CGTATTGAGC GGCGCGGAAC
TGCCGCCCGA ACGGCAGGCA 451 GAACTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAGGCAA AACAGGTTAC
AAAATCGGCT TGCAGATTCC 651 GCACTACCTT GCCGTTATCC AATACGCCGG
CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGTGCCA
GCGAACTTTC AAACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCATTGAA 801 AACCGccaaa cTGCTCGGCT TTAAAAATTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC GAACAGGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAACACCTCG GTCTCGCCGA
CCCGCAGCCG TGGGACTTGA 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTTCTGGCAG GCCTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
CGCCGAAAAA ACCGTTCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCAAAACC 1201 ATCGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACtaca AAGGCCGCCG
CCGCTTTGCC GACGgcacGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCGCCCC GCCCGTCGGC 1351 GGCAAAGAAG CGCGTTTAAG CCACGACGAA
ATCCTCACCC TCTTCCACGA 1401 AacCGGCCAC GGACTGCACC ACCTGCTTAC
CCAAGTGGAC GAACTGGGCG 1451 TGTCCGGCAT CAAcggcgtA GAATGGGACG
CGGTCGAACT GCCCAGCCAG 1501 TTTATGGAAA ACTTCGTTTG GGAATACAAT
GTATTGGCAC AAATGTCCGC 1551 CCACGAAGAA AccgGCGAGC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TcgcCGCCAA AAACTTCCAG CGCGGTATGT
TCCTCGTCCG GCAAATGGAG 1651 TTCGCCCTCT TCGATATGAT GATTTACAGT
GAAAGCGACG AATGCCGTCT 1701 GAAAAACTGG CAGCAGGTTT TAGACAGCGT
GCGCAAAGAA GTcGCCGTCA 1751 TCCAACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCacatctTC 1801 GCcggcGGCT ATTCCGCAGG CTATTACAGC
TACGCATGGG CCGAAGTCCt 1851 cAGCACCGAT GCCTACGCCG CCTTTGAAGA
AAGcGACGac gtcGCCGCCA 1901 CAGGCAAACG CTTCTGGCAA GAAAtccttg
ccgtcggcgg ctCCCGCAGC 1951 gcgGCGGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTGCTGCGC CAaagcggtT TCGACAACGC
gGCttgA
This corresponds to the amino acid sequence <SEQ ID 3088; ORF
128.ng>:
TABLE-US-00064 g128.pep 1 MIDNALLHLG EEPRFNQIQT EDIKPAVQTA
IAEARGQIAA VKAQTHTGWA 51 NTVERLTGIT ERVGRIWGVV SHLNSVVDTP
ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFA TLSPAQKTKL
DHDLRDFVLS GAELPPERQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYAGNRE
LREQIYRAYV TRASELSNDG 251 KFDNTANIDR TLENALKTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR EHLGLADPQP
WDLSYAGEKL REAKYAFSET 351 EVKKYFPVGK VLAGLFAQIK KLYGIGFAEK
TVPVWHKDVR YFELQQNGKT 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFA
DGTLQLPTAY LVCNFAPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGEPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS ESDECRLKNW QQVLDSVRKE
VAVIQPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSTD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR QSGFDNAA*
ORF 128 shows 91.7% identity over a 475 aa overlap with a predicted
ORF (ORF 128.ng) from N. gonorrhoeae:
TABLE-US-00065 m128/g128 10 20 30 40 50 60 g128.pep
MIDNALLHLGEEPRFNQIQTEDIKPAVQTAIAEARGQIAAVKAQTHTGWANTVERLTGIT |
|||||||||||||:||:|||||||:|||||||| ||||:||||||||||||| ||||| m128
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 g128.pep
ERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFA
|||||||||||||| |:|||||||||||||||||||||||||||||||||||||||||| m128
ERVGRIWGVVSHLNCVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 g128.pep
TLSPAQKTKLDHDLRDFVLSGAELPPERQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY
||||||||||:| m128 TLSPAQKTKLNH 130 // 340 350 360 g128.pep
YAGEKLREAKYAFSETEVKKYFPVGKVLAG ||:||||||||||||| |||||||| || | m128
YASEKLREAKYAFSETXVKKYFPVGXVLNG 10 20 30 370 380 390 400 410 420
g128.pep
LFAQIKKLYGIGFAEKTVPVWHKDVRYFELQQNGKTIGGVYMDLYAREGKRGGAWMNDYK ||||
||||||||:||||||||||||| ||||||::|||||||||||||||||||||||| m128
LFAQXKKLYGIGFTEKTVPVWHKDVRYXELQQNGEXIGGVYMDLYAREGKRGGAWMNDYK 40 50
60 70 80 90 430 440 450 460 470 480 g128.pep
GRRRFADGTLQLPTAYLVCNFAPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVDELGV
|||||:|||||||||||||||||||||:|||||||||| ||||||||||||||||||||| m128
GRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVDELGV 100
110 120 130 140 150 490 500 510 520 530 540 g128.pep
SGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGEPLPKELFDKMLAAKNFQRGMF ||||||
||||||||||||||||||||||| ||||||| |||||| || ||||||| ||| m128
SGINGVXWDAVELPSQFMENFVWEYNVLAQXSAHEETGVPLPKELXDKXLAAKNFQXGMF 160
170 180 190 200 210 550 560 570 580 590 600 g128.pep
LVRQMEFALFDMMIYSESDECRLKNWQQVLDSVRKEVAVIQPPEYNRFANSFGHIFAGGY |||
||||||||||||:|| ||||||||||||||:||||||||||||| |||||||||| m128
XVRQXEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIFAGGY 220
230 240 250 260 270 610 620 630 640 650 660 g128.pep
SAGYYSYAWAEVLSTDAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPS ||:
||||||||||:||||||||||||||||||||||||||| |||:||||||||||||| m128
SAAXYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGXSRSGAESFKAFRGREPS 280
290 300 310 320 330 670 679 g128.pep IDALLRQSGFDNAAX ||||||:||||||:
m128 IDALLRHSGFDNAVX 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3089>:
TABLE-US-00066 a128.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATTGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCAC
CGACACGCCC GAACTGCGCG 251 CCGCCTACAA TGAATTAATG CCCGAAATTA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAACTCCCC 351 CGAGTTCGAC ACCCTCTCCC ACGCGCAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAATTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCT 601 GCCGCGCAAA GCGAAGGCAA AACAGGCTAC
AAAATCGGTT TGCAGATTCC 651 GCACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCAAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAGCTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACCCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTCG GCCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCACCCC GCCCGTCGGC 1351 GGCAAAGAAG CCCGCTTGAG CCATGACGAA
ATCCTCACCC TCTTCCACGA 1401 AACCGGACAC GGCCTGCACC ACCTGCTTAC
CCAAGTCGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CAGTCGAACT GCCCAGTCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCGC AAATGTCCGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGAATGT
TCCTCGTCCG CCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAGAA GTCGCCGTCG 1751 TCCGACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGCT TCGACAACGC
GGCTTGA
This corresponds to the amino acid sequence <SEQ ID 3090; ORF
128.a>:
TABLE-US-00067 a128.pep 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVTDTP
ELRAAYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSHAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYADNRK
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLENALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLGLADLQP
WDLGYAGEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFTPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKE
VAVVRPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAA* m128/a128
66.0% identity in 677 aa overlap 10 20 30 40 50 60 m128.pep
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a128
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 m128.pep
ERVGRIWGVVSHLNCVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD
|||||||||||||| |:|||||||:||||||||||||||||||||||||||||||||||| a128
ERVGRIWGVVSHLNSVTDTPELRAAYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 m128.pep
TLSPAQKTKLNH------------------------------------------------ |||
|||||||| a128
TLSHAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 m128.pep
------------------------------------------------------------ a128
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQIYRAYV 190
200 210 220 230 240 m128.pep
------------------------------------------------------------ a128
TRASELSDDGKFDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 140 150 m128.pep
----------------------------------YASEKLREAKYAFSETXVKKYFPVGX
||:||||||||||||| |||||||| a128
ARRAKPYAEKDLAEVKAFARESLGLADLQPWDLGYAGEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 160 170 180 190 200 210 m128.pep
VLNGLFAQXKKLYGIGFTEKTVPVWHKDVRYXELQQNGEXIGGVYMDLYAREGKRGGAWM
|||||||| |||||||||||||||||||||| |||||||:|||||||||||||||||||| a128
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 220 230 240 250 260 270 m128.pep
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD
|||||||||||||||||||||||||:|||||:|||||||||| ||||||||||||||||| a128
NDYKGRRRFSDGTLQLPTAYLVCNFTPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD 430
440 450 460 470 480 280 290 300 310 320 330 m128.pep
ELGVSGINGVXWDAVELPSQFMENFVWEYNVLAQXSAHEETGVPLPKELXDKXLAAKNFQ
|||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||| a128
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540 340 350 360 370 380 390 m128.pep
XGMFXVRQXEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIF |||
||| ||||||||||||||||||||||||||||||:|||::|||||||| |||||| a128
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIF 550
560 570 580 590 600 400 410 420 430 440 450 m128.pep
AGGYSAAXYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGXSRSGAESFKAFRG
||||||: |||||||||||||||||||||||||||||||||||||| |||:||||||||| a128
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG 610
620 630 640 650 660 460 470 m128.pep REPSIDALLRHSGFDNAVX
|||||||||||||||||: a128 REPSIDALLRHSGFDNAAX 670
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3091>:
TABLE-US-00068 m128-1.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATCGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCGC
CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG CCCGAAATCA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAATTCCCC 351 CGAATTCGAC ACCCTCTCCC CCGCACAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAACTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAAGCAA AACAGGCTAC
AAAATCGGCT TGCAGATTCC 651 ACACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAACTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGCAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTGA ACCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCAG CGAAAAACTG CGCGAAGCCA
AATACGCGTT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCGCCCC ACCCGTCGGC 1351 GGCAGGGAAG CCCGCCTGAG CCACGACGAA
ATCCTCATCC TCTTCCACGA 1401 AACCGGACAC GGGCTGCACC ACCTGCTTAC
CCAAGTGGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CGGTCGAACT GCCCAGCCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCAC AAATGTCAGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGCATGT
TCCTCGTCCG GCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAAAA GTCGCCGTCA 1751 TCCAGCCGCC CGAATACAAC CGCTTCGCCT
TGAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGC
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGTT TCGACAACGC
GGTCTGA
This corresponds to the amino acid sequence <SEQ ID 3092; ORF
128-1>:
TABLE-US-00069 m128-1.pep. 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVADTP
ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSPAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSESKTGY KIGLQIPHYL AVIQYADNRE
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLANALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLNLADLQP
WDLGYASEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFAPPVG 451 GREARLSHDE ILILFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKK
VAVIQPPEYN RFALSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAV*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3093>:
TABLE-US-00070 g128-1.seq (partial) 1 ATGATTGACA ACGCACTGCT
CCACTTGGGC GAAGAACCCC GTTTTAATCA 51 AATCAAAACC GAAGACATCA
AACCCGCCGT CCAAACCGCC ATCGCCGAAG 101 CGCGCGGACA AATCGCCGCC
GTCAAAGCGC AAACGCACAC CGGCTGGGCG 151 AACACCGTCG AGCGTCTGAC
CGGCATCACC GAACGCGTCG GCAGGATTTG 201 GGGCGTCGTG TCCCATCTCA
ACTCCGTCGT CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG
CCTGAAATCA CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAACTGTA
CAACCGCTTC AAAACCATCA AAAATTCCCC 351 CGAATTTGCA ACGCTTTCCC
CCGCACAAAA AACCAAGCTC GATCACGACC 401 TGCGCGATTT CGTATTGAGC
GGCGCGGAAC TGCCGCCCGA ACGGCAGGCA 451 GAACTGGCAA AACTGCAAAC
CGAAGGCGCG CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA
CCGACGCGTT CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT
CCCGAAGACG CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAGGCAA
AACAGGTTAC AAAATCGGCT TGCAGATTCC 651 GCACTACCTT GCCGTTATCC
AATACGCCGG CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT
ACCCGTGCCA GCGAACTTTC AAACGACGGC 751 AAATTCGACA ACACCGCCAA
CATCGACCGC ACGCTCGAAA ACGCATTGAA 801 AACCGCCAAA CTGCTCGGCT
TTAAAAATTA CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC
GAACAGGTTT TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA
CGCCGAAAAA GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAACACCTCG
GTCTCGCCGA CCCGCAGCCG TGGGACTTGA 1001 GCTACGCCGG CGAAAAACTG
CGCGAAGCCA AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC
CGTCGGCAAA GTTCTGGCAG GCCTGTTCGC 1101 CCAAATCAAA AAACTCTACG
GCATCGGATT CGCCGAAAAA ACCGTTCCCG 1151 TCTGGCACAA AGACGTGCGC
TATTTTGAAT TGCAACAAAA CGGCAAAACC 1201 ATCGGCGGCG TTTATATGGA
TTTGTACGCA CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA
AAGGCCGCCG CCGCTTTGCC GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC
CTCGTCTGCA ACTTCGCCCC GCCCGTCGGC 1351 GGCAAAGAAG CGCGTTTAAG
CCACGACGAA ATCCTCACCC TCTTCCACGA 1401 AACCGGCCAC GGACTGCACC
ACCTGCTTAC CCAAGTGGAC GAACTGGGCG 1451 TGTCCGGCAT CAACGGCGTA AAA
This corresponds to the amino acid sequence <SEQ ID 3094; ORF
128-1.ng>:
TABLE-US-00071 g128-1.pep (partial) 1 MIDNALLHLG EEPRFNQIKT
EDIKPAVQTA IAEARGQIAA VKAQTHTGWA 51 NTVERLTGIT ERVGRIWGVV
SHLNSVVDTP ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFA
TLSPAQKTKL DHDLRDFVLS GAELPPERQA 151 ELAKLQTEGA QLSAKFSQNV
LDATDAFGIY FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL
AVIQYAGNRE LREQIYRAYV TRASELSNDG 251 KFDNTANIDR TLENALKTAK
LLGFKNYAEL SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR
EHLGLADPQP WDLSYAGEKL REAKYAFSET 351 EVKKYFPVGK VLAGLFAQIK
KLYGIGFAEK TVPVWHKDVR YFELQQNGKT 401 IGGVYMDLYA REGKRGGAWM
NDYKGRRRFA DGTLQLPTAY LVCNFAPPVG 451 GKEARLSHDE ILTLFHETGH
GLHHLLTQVD ELGVSGINGV K m128-1/g128-1 94.5% identity in 491 aa
overlap 10 20 30 40 50 60 g128-1.pep
MIDNALLHLGEEPRFNQIKTEDIKPAVQTAIAEARGQIAAVKAQTHTGWANTVERLTGIT |
|||||||||||||:||||||||||:|||||||| ||||:||||||||||||| ||||| m128-1
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 g128-1.pep
ERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFA
||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| m128-1
ERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 g128-1.pep
TLSPAQKTKLDHDLRDFVLSGAELPPERQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY
||||||||||:||||||||||||||||:|||||||||||||||||||||||||||||||| m128-1
TLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 190 200 210 220 230 240 g128-1.pep
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYAGNRELREQIYRAYV
|||||||||||||||||||||||||:|||||||||||||||||||| ||||||||||||| m128-1
FDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPHYLAVIQYADNRELREQIYRAYV 190
200 210 220 230 240 250 260 270 280 290 300 g128-1.pep
TRASELSNDGKFDNTANIDRTLENALKTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL
|||||||:|||||||||||||| |||:||||||||||||||||||||||||||||||||| m128-1
TRASELSDDGKFDNTANIDRTLANALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 310 320 330 340 350 360 g128-1.pep
ARRAKPYAEKDLAEVKAFAREHLGLADPQPWDLSYAGEKLREAKYAFSETEVKKYFPVGK
||||||||||||||||||||| |:||| |||||:||:||||||||||||||||||||||| m128-1
ARRAKPYAEKDLAEVKAFARESLNLADLQPWDLGYASEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 370 380 390 400 410 420 g128-1.pep
VLAGLFAQIKKLYGIGFAEKTVPVWHKDVRYFELQQNGKTIGGVYMDLYAREGKRGGAWM ||
||||||||||||||:||||||||||||||||||||:||||||||||||||||||||| m128-1
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 430 440 450 460 470 480 g128-1.pep
NDYKGRRRFADGTLQLPTAYLVCNFAPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD
|||||||||:|||||||||||||||||||||:|||||||||| ||||||||||||||||| m128-1
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD 430
440 450 460 470 480 490 g128-1.pep ELGVSGINGVK ||||||||||: m128-1
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3095>:
TABLE-US-00072 a128-1.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATTGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCAC
CGACACGCCC GAACTGCGCG 251 CCGCCTACAA TGAATTAATG CCCGAAATTA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAACTCCCC 351 CGAGTTCGAC ACCCTCTCCC ACGCGCAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAATTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCT 601 GCCGCGCAAA GCGAAGGCAA AACAGGCTAC
AAAATCGGTT TGCAGATTCC 651 GCACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCAAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAGCTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACCCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTCG GCCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCACCCC GCCCGTCGGC 1351 GGCAAAGAAG CCCGCTTGAG CCATGACGAA
ATCCTCACCC TCTTCCACGA 1401 AACCGGACAC GGCCTGCACC ACCTGCTTAC
CCAAGTCGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CAGTCGAACT GCCCAGTCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCGC AAATGTCCGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGAATGT
TCCTCGTCCG CCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAGAA GTCGCCGTCG 1751 TCCGACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGCT TCGACAACGC
GGCTTGA
This corresponds to the amino acid sequence <SEQ ID 3096; ORF
128-1.a>:
TABLE-US-00073 a128-1.pep 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVTDTP
ELRAAYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSHAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYADNRK
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLENALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLGLADLQP
WDLGYAGEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFTPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKE
VAVVRPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAA*
m128-1/a128-1 97.8% identity in 677 aa overlap 10 20 30 40 50 60
a128-1.pep
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
MIDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHIGWANTVEPLIGIT 10 20
30 40 50 60 70 80 90 100 110 120 a128-1.pep
ERVGRIWGVVSHLNSVTDTPELRAAYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD
||||||||||||||||:|||||||:||||||||||||||||||||||||||||||||||| m128-1
ERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 a128-1.pep
TLSHAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
TLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 190 200 210 220 230 240 a128-1.pep
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQIYRAYV
|||||||||||||||||||||||||:|||||||||||||||||||||||:|||||||||| m128-1
FDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPHYLAVIQYADNRELREQIYRAYV 190
200 210 220 230 240 250 260 270 280 290 300 a128-1.pep
TRASELSDDGKFDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| m128-1
TRASELSDDGKFDNTANIDRTLANALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 310 320 330 340 350 360 a128-1.pep
ARRAKPYAEKDLAEVKAFARESLGLADLQPWDLGYAGEKLREAKYAFSETEVKKYFPVGK
|||||||||||||||||||||||:||||||||||||:||||||||||||||||||||||| m128-1
ARRAKPYAEKDLAEVKAFARESLNLADLQPWDLGYASEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 370 380 390 400 410 420 a128-1.pep
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 430 440 450 460 470 480 a128-1.pep
NDYKGRRRFSDGTLQLPTAYLVCNFTPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD
|||||||||||||||||||||||||:|||||:|||||||||| ||||||||||||||||| m128-1
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD 430
440 450 460 470 480 490 500 510 520 530 540 a128-1.pep
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540 550 560 570 580 590 600 a128-1.pep
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIF
|||||||||||||||||||||||||||||||||||||||:|||::|||||||| |||||| m128-1
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIF 550
560 570 580 590 600 610 620 630 640 650 660 a128-1.pep
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG 610
620 630 640 650 660 670 679 a128-1.pep REPSIDALLRHSGFDNAAX
|||||||||||||||||: m128-1 REPSIDALLRHSGFDNAVX 670
206 The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3097>:
TABLE-US-00074 m206.seq 1 ATGTTTCCCC CCGACAAAAC CCTTTTCCTC
TGTCTCAGCG CACTGCTCCT 51 CGCCTCATGC GGCACGACCT CCGGCAAACA
CCGCCAACCG AAACCCAAAC 101 AGACAGTCCG GCAAATCCAA GCCGTCCGCA
TCAGCCACAT CGACCGCACA 151 CAAGGCTCGC AGGAACTCAT GCTCCACAGC
CTCGGACTCA TCGGCACGCC 201 CTACAAATGG GGCGGCAGCA GCACCGCAAC
CGGCTTCGAT TGCAGCGGCA 251 TGATTCAATT CGTTTACAAr AACGCCCTCA
ACGTCAAGCT GCCGCGCACC 301 GCCCGCGACA TGGCGGCGGC AAGCCGsAAA
ATCCCCGAcA GCCGCyTCAA 351 GGCCGGCGAC CTCGTATTCT TCAACACCGG
CGGCGCACAC CGCTACTCAC 401 ACGTCGGACT CTACATCGGC AACGGCGAAT
TCATCCATGC CCCCAGCAGC 451 GGCAAAACCA TCAAAACCGA AAAACTCTCC
ACACCGTTTT ACGCCAAAAA 501 CTACCTCGGC GCACATACTT TTTTTACAGA ATGA
This corresponds to the amino acid sequence <SEQ ID 3098; ORF
206>:
TABLE-US-00075 m206.pep.. 1 MFPPDKTLFL CLSALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIDRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQFVYK NALNVKLPRT 101 ARDMAAASRK IPDSRXKAGD LVFFNTGGAH
RYSHVGLYIG NGEFIHAPSS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3099>:
TABLE-US-00076 g206.seq 1 atgttttccc ccgacaaaac ccttttcctc
tgtctcggcg cactgctcct 51 cgcctcatgc ggcacgacct ccggcaaaca
ccgccaaccg aaacccaaac 101 agacagtccg gcaaatccaa gccgtccgca
tcagccacat cggccgcaca 151 caaggctcgc aggaactcat gctccacagc
ctcggactca tcggcacgcc 201 ctacaaatgg ggcggcagca gcaccgcaac
cggcttcgac tgcagcggca 251 tgattcaatt ggtttacaaa aacgccctca
acgtcaagct gccgcgcacc 301 gcccgcgaca tggcggcggc aagccgcaaa
atccccgaca gccgcctcaa 351 ggccggcgac atcgtattct tcaacaccgg
cggcgcacac cgctactcac 401 acgtcggact ctacatcggc aacggcgaat
tcatccatgc ccccggcagc 451 ggcaaaacca tcaaaaccga aaaactctcc
acaccgtttt acgccaaaaa 501 ctaccttgga gcgcatacgt tttttacaga atga
This corresponds to the amino acid sequence <SEQ ID 3100; ORF
206.ng>:
TABLE-US-00077 g206.pep 1 MFSPDKTLFL CLGALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIGRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQLVYK NALNVKLPRT 101 ARDMAAASRK IPDSRLKAGD IVFFNTGGAH
RYSHVGLYIG NGEFIHAPGS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE*
ORF 206 shows 96.0% identity over a 177 aa overlap with a predicted
ORF (ORF 206.ng) from N. gonorrhoeae:
TABLE-US-00078 m206/g206 10 20 30 40 50 60 m206.pep
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS ||
|||||||||:|||||||||||||||||||||||||||||||||| |||||||||||| g206
MFSPDKTLFLCLGALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIGRTQGSQELMLHS 10 20
30 40 50 60 70 80 90 100 110 120 m206.pep
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRXKAGD
||||||||||||||||||||||||||:|||||||||||||||||||||||||||| |||| g206
LGLIGTPYKWGGSSTATGFDCSGMIQLVYKNALNVKLPRTARDMAAASRKIPDSRLKAGD 70 80
90 100 110 120 130 140 150 160 170 m206.pep
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX
:|||||||||||||||||||||||||||:|||||||||||||||||||||||||||| g206
IVFFNTGGAHRYSHVGLYIGNGEFIHAPGSGKTIKTEKLSTPFYAKNYLGAHTFFTE 130 140
150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3101>:
TABLE-US-00079 a206.seq 1 ATGTTTCCCC CCGACAAAAC CCTTTTCCTC
TGTCTCAGCG CACTGCTCCT 51 CGCCTCATGC GGCACGACCT CCGGCAAACA
CCGCCAACCG AAACCCAAAC 101 AGACAGTCCG GCAAATCCAA GCCGTCCGCA
TCAGCCACAT CGACCGCACA 151 CAAGGCTCGC AGGAACTCAT GCTCCACAGC
CTCGGACTCA TCGGCACGCC 201 CTACAAATGG GGCGGCAGCA GCACCGCAAC
CGGCTTCGAT TGCAGCGGCA 251 TGATTCAATT CGTTTACAAA AACGCCCTCA
ACGTCAAGCT GCCGCGCACC 301 GCCCGCGACA TGGCGGCGGC AAGCCGCAAA
ATCCCCGACA GCCGCCTTAA 351 GGCCGGCGAC CTCGTATTCT TCAACACCGG
CGGCGCACAC CGCTACTCAC 401 ACGTCGGACT CTATATCGGC AACGGCGAAT
TCATCCATGC CCCCAGCAGC 451 GGCAAAACCA TCAAAACCGA AAAACTCTCC
ACACCGTTTT ACGCCAAAAA 501 CTACCTCGGC GCACATACTT TCTTTACAGA ATGA
This corresponds to the amino acid sequence <SEQ ID 3102; ORF
206.a>:
TABLE-US-00080 a206.pep 1 MFPPDKTLFL CLSALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIDRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQFVYK NALNVKLPRT 101 ARDMAAASRK IPDSRLKAGD LVFFNTGGAH
RYSHVGLYIG NGEFIHAPSS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE* m206/a206
99.4% identity in 177 aa overlap 10 20 30 40 50 60 m206.pep
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a206
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS 10 20
30 40 50 60 70 80 90 100 110 120 m206.pep
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRXKAGD
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| a206
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRLKAGD 70 80
90 100 110 120 130 140 150 160 170 m206.pep
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a206
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX 130 140
150 160 170
287 The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3103>:
TABLE-US-00081 m287.seq 1 ATGTTTAAAC GCAGCGTAAT CGCAATGGCT
TGTATTTTTG CCCTTTCAGC 51 CTGCGGGGGC GGCGGTGGCG GATCGCCCGA
TGTCAAGTCG GCGGACACGC 101 TGTCAAAACC TGCCGCCCCT GTTGTTTCTG
AAAAAGAGAC AGAGGCAAAG 151 GAAGATGCGC CACAGGCAGG TTCTCAAGGA
CAGGGCGCGC CATCCGCACA 201 AGGCAGTCAA GATATGGCGG CGGTTTCGGA
AGAAAATACA GGCAATGGCG 251 GTGCGGTAAC AGCGGATAAT CCCAAAAATG
AAGACGAGGT GGCACAAAAT 301 GATATGCCGC AAAATGCCGC CGGTACAGAT
AGTTCGACAC CGAATCACAC 351 CCCGGATCCG AATATGCTTG CCGGAAATAT
GGAAAATCAA GCAACGGATG 401 CCGGGGAATC GTCTCAGCCG GCAAACCAAC
CGGATATGGC AAATGCGGCG 451 GACGGAATGC AGGGGGACGA TCCGTCGGCA
GGCGGGCAAA ATGCCGGCAA 501 TACGGCTGCC CAAGGTGCAA ATCAAGCCGG
AAACAATCAA GCCGCCGGTT 551 CTTCAGATCC CATCCCCGCG TCAAACCCTG
CACCTGCGAA TGGCGGTAGC 601 AATTTTGGAA GGGTTGATTT GGCTAATGGC
GTTTTGATTG ACGGGCCGTC 651 GCAAAATATA ACGTTGACCC ACTGTAAAGG
CGATTCTTGT AGTGGCAATA 701 ATTTCTTGGA TGAAGAAGTA CAGCTAAAAT
CAGAATTTGA AAAATTAAGT 751 GATGCAGACA AAATAAGTAA TTACAAGAAA
GATGGGAAGA ATGATAAATT 801 TGTCGGTTTG GTTGCCGATA GTGTGCAGAT
GAAGGGAATC AATCAATATA 851 TTATCTTTTA TAAACCTAAA CCCACTTCAT
TTGCGCGATT TAGGCGTTCT 901 GCACGGTCGA GGCGGTCGCT TCCGGCCGAG
ATGCCGCTGA TTCCCGTCAA 951 TCAGGCGGAT ACGCTGATTG TCGATGGGGA
AGCGGTCAGC CTGACGGGGC 1001 ATTCCGGCAA TATCTTCGCG CCCGAAGGGA
ATTACCGGTA TCTGACTTAC 1051 GGGGCGGAAA AATTGCCCGG CGGATCGTAT
GCCCTTCGTG TTCAAGGCGA 1101 ACCGGCAAAA GGCGAAATGC TTGCGGGCGC
GGCCGTGTAC AACGGCGAAG 1151 TACTGCATTT CCATACGGAA AACGGCCGTC
CGTACCCGAC CAGGGGCAGG 1201 TTTGCCGCAA AAGTCGATTT CGGCAGCAAA
TCTGTGGACG GCATTATCGA 1251 CAGCGGCGAT GATTTGCATA TGGGTACGCA
AAAATTCAAA GCCGCCATCG 1301 ATGGAAACGG CTTTAAGGGG ACTTGGACGG
AAAATGGCAG CGGGGATGTT 1351 TCCGGAAAGT TTTACGGCCC GGCCGGCGAG
GAAGTGGCGG GAAAATACAG 1401 CTATCGCCCG ACAGATGCGG AAAAGGGCGG
ATTCGGCGTG TTTGCCGGCA 1451 AAAAAGAGCA GGATTGA
This corresponds to the amino acid sequence <SEQ ID 3104; ORF
287>:
TABLE-US-00082 m287.pep 1 MFKRSVIAMA CIFALSACGG GGGGSPDVKS
ADTLSKPAAP VVSEKETEAK 51 EDAPQAGSQG QGAPSAQGSQ DMAAVSEENT
GNGGAVTADN PKNEDEVAQN 101 DMPQNAAGTD SSTPNHTPDP NMLAGNMENQ
ATDAGESSQP ANQPDMANAA 151 DGMQGDDPSA GGQNAGNTAA QGANQAGNNQ
AAGSSDPIPA SNPAPANGGS 201 NFGRVDLANG VLIDGPSQNI TLTHCKGDSC
SGNNFLDEEV QLKSEFEKLS 251 DADKISNYKK DGKNDKFVGL VADSVQMKGI
NQYIIFYKPK PTSFARFRRS 301 ARSRRSLPAE MPLIPVNQAD TLIVDGEAVS
LTGHSGNIFA PEGNYRYLTY 351 GAEKLPGGSY ALRVQGEPAK GEMLAGAAVY
NGEVLHFHTE NGRPYPTRGR 401 FAAKVDFGSK SVDGIIDSGD DLHMGTQKFK
AAIDGNGFKG TWTENGSGDV 451 SGKFYGPAGE EVAGKYSYRP TDAEKGGFGV
FAGKKEQD*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3105>:
TABLE-US-00083 g287.seq 1 atgtttaaac gcagtgtgat tgcaatggct
tgtatttttc ccctttcagc 51 ctgtgggggc ggcggtggcg gatcgcccga
tgtcaagtcg gcggacacgc 101 cgtcaaaacc ggccgccccc gttgttgctg
aaaatgccgg ggaaggggtg 151 ctgccgaaag aaaagaaaga tgaggaggca
gcgggcggtg cgccgcaagc 201 cgatacgcag gacgcaaccg ccggagaagg
cagccaagat atggcggcag 251 tttcggcaga aaatacaggc aatggcggtg
cggcaacaac ggacaacccc 301 aaaaatgaag acgcgggggc gcaaaatgat
atgccgcaaa atgccgccga 351 atccgcaaat caaacaggga acaaccaacc
cgccggttct tcagattccg 401 cccccgcgtc aaaccctgcc cctgcgaatg
gcggtagcga ttttggaagg 451 acgaacgtgg gcaattctgt tgtgattgac
ggaccgtcgc aaaatataac 501 gttgacccac tgtaaaggcg attcttgtaa
tggtgataat ttattggatg 551 aagaagcacc gtcaaaatca gaatttgaaa
aattaagtga tgaagaaaaa 601 attaagcgat ataaaaaaga cgagcaacgg
gagaattttg tcggtttggt 651 tgctgacagg gtaaaaaagg atggaactaa
caaatatatc atcttctata 701 cggacaaacc acctactcgt tctgcacggt
cgaggaggtc gcttccggcc 751 gagattccgc tgattcccgt caatcaggcc
gatacgctga ttgtggatgg 801 ggaagcggtc agcctgacgg ggcattccgg
caatatcttc gcgcccgaag 851 ggaattaccg gtatctgact tacggggcgg
aaaaattgcc cggcggatcg 901 tatgccctcc gtgtgcaagg cgaaccggca
aaaggcgaaa tgcttgttgg 951 cacggccgtg tacaacggcg aagtgctgca
tttccatatg gaaaacggcc 1001 gtccgtaccc gtccggaggc aggtttgccg
caaaagtcga tttcggcagc 1051 aaatctgtgg acggcattat cgacagcggc
gatgatttgc atatgggtac 1101 gcaaaaattc aaagccgcca tcgatggaaa
cggctttaag gggacttgga 1151 cggaaaatgg cggcggggat gtttccggaa
ggttttacgg cccggccggc 1201 gaggaagtgg cgggaaaata cagctatcgc
ccgacagatg ctgaaaaggg 1251 cggattcggc gtgtttgccg gcaaaaaaga
tcgggattga
This corresponds to the amino acid sequence <SEQ ID 3106; ORF
287.ng>:
TABLE-US-00084 g287.pep 1 MFKRSVIAMA CIFPLSACGG GGGGSPDVKS
ADTPSKPAAP VVAENAGEGV 51 LPKEKKDEEA AGGAPQADTQ DATAGEGSQD
MAAVSAENTG NGGAATTDNP 101 KNEDAGAQND MPQNAAESAN QTGNNQPAGS
SDSAPASNPA PANGGSDFGR 151 TNVGNSVVID GPSQNITLTH CKGDSCNGDN
LLDEEAPSKS EFEKLSDEEK 201 IKRYKKDEQR ENFVGLVADR VKKDGTNKYI
IFYTDKPPTR SARSRRSLPA 251 EIPLIPVNQA DTLIVDGEAV SLTGHSGNIF
APEGNYRYLT YGAEKLPGGS 301 YALRVQGEPA KGEMLVGTAV YNGEVLHFHM
ENGRPYPSGG RFAAKVDFGS 351 KSVDGIIDSG DDLHMGTQKF KAAIDGNGFK
GTWTENGGGD VSGRFYGPAG 401 EEVAGKYSYR PTDAEKGGFG VFAGKKDRD*
m287/g287 70.1% identity in 499 aa overlap 10 20 30 40 49 m287.pep
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE-----------KETEA
||||||||||||| ||||||||||||||||||| ||||||||:| |: || g287
MFKRSVIAMACIFPLSACGGGGGGSPDVKSADTPSKPAAPVVAENAGEGVLPKEKKDEEA 10 20
30 40 50 60 50 60 70 80 90 100 109 m287.pep
KEDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQNDMPQNAAGT ||||
:| | :::||||||||| ||||||||:|:||||||| |||||||||| g287
AGGAPQADTQD--ATAGEGSQDMAAVSAENTGNGGAATTDNPKNEDAGAQNDMPQNAA-- 70 80
90 100 110 110 120 130 140 150 160 169 m287.pep
DSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAADGMQGDDPSAGGQNAGNTA g287
------------------------------------------------------------ 170
180 190 200 210 220 229 m287.pep
AQGANQAGNNQAAGSSDPIPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLTHCKGDS
::|||:|||| ||||| ||||||||||||:|||::::|:|:||||||||||||||||| g287
-ESANQTGNNQPAGSSDSAPASNPAPANGGSDFGRTNVGNSVVIDGPSQNITLTHCKGDS 120
130 140 150 160 170 230 240 250 260 270 280 289 m287.pep
CSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKP
|:|:|:||||: ||||||||| :||: |||| : ::||||||| |: | |:||||| g287
CNGDNLLDEEAPSKSEFEKLSDEEKIKRYKKDEQRENFVGLVADRVKKDGTNKYIIFYTD 180
190 200 210 220 230 290 300 310 320 330 340 349 m287.pep
KPTSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLT || :
||||||||||||:|||||||||||||||||||||||||||||||||||||| g287
KPPT-----RSARSRRSLPAEIPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLT 240
250 260 270 280 290 350 360 370 380 390 400 409 m287.pep
YGAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGRFAAKVDFGS
|||||||||||||||||||||||||:|:||||||||||| |||||||: ||||||||||| g287
YGAEKLPGGSYALRVQGEPAKGEMLVGTAVYNGEVLHFHMENGRPYPSGGRFAAKVDFGS 300
310 320 330 340 350 410 420 430 440 450 460 469 m287.pep
KSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDVSGKFYGPAGEEVAGKYSYR
|||||||||||||||||||||||||||||||||||||:|||||:|||||||||||||||| g287
KSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRFYGPAGEEVAGKYSYR 360
370 380 390 400 410 470 480 489 m287.pep PTDAEKGGFGVFAGKKEQDX
||||||||||||||||::|| g287 PTDAEKGGFGVFAGKKDRDX 420 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3107>:
TABLE-US-00085 a287.seq 1 ATGTTTAAAC GCAGTGTGAT TGCAATGGCT
TGTATTGTTG CCCTTTCAGC 51 CTGTGGGGGC GGCGGTGGCG GATCGCCCGA
TGTTAAGTCG GCGGACACGC 101 TGTCAAAACC TGCCGCCCCT GTTGTTACTG
AAGATGTCGG GGAAGAGGTG 151 CTGCCGAAAG AAAAGAAAGA TGAGGAGGCG
GTGAGTGGTG CGCCGCAAGC 201 CGATACGCAG GACGCAACCG CCGGAAAAGG
CGGTCAAGAT ATGGCGGCAG 251 TTTCGGCAGA AAATACAGGC AATGGCGGTG
CGGCAACAAC GGATAATCCC 301 GAAAATAAAG ACGAGGGACC GCAAAATGAT
ATGCCGCAAA ATGCCGCCGA 351 TACAGATAGT TCGACACCGA ATCACACCCC
TGCACCGAAT ATGCCAACCA 401 GAGATATGGG AAACCAAGCA CCGGATGCCG
GGGAATCGGC ACAACCGGCA 451 AACCAACCGG ATATGGCAAA TGCGGCGGAC
GGAATGCAGG GGGACGATCC 501 GTCGGCAGGG GAAAATGCCG GCAATACGGC
AGATCAAGCT GCAAATCAAG 551 CTGAAAACAA TCAAGTCGGC GGCTCTCAAA
ATCCTGCCTC TTCAACCAAT 601 CCTAACGCCA CGAATGGCGG CAGCGATTTT
GGAAGGATAA ATGTAGCTAA 651 TGGCATCAAG CTTGACAGCG GTTCGGAAAA
TGTAACGTTG ACACATTGTA 701 AAGACAAAGT ATGCGATAGA GATTTCTTAG
ATGAAGAAGC ACCACCAAAA 751 TCAGAATTTG AAAAATTAAG TGATGAAGAA
AAAATTAATA AATATAAAAA 801 AGACGAGCAA CGAGAGAATT TTGTCGGTTT
GGTTGCTGAC AGGGTAGAAA 851 AGAATGGAAC TAACAAATAT GTCATCATTT
ATAAAGACAA GTCCGCTTCA 901 TCTTCATCTG CGCGATTCAG GCGTTCTGCA
CGGTCGAGGC GGTCGCTTCC 951 GGCCGAGATG CCGCTGATTC CCGTCAATCA
GGCGGATACG CTGATTGTCG 1001 ATGGGGAAGC GGTCAGCCTG ACGGGGCATT
CCGGCAATAT CTTCGCGCCC 1051 GAAGGGAATT ACCGGTATCT GACTTACGGG
GCGGAAAAAT TGTCCGGCGG 1101 ATCGTATGCC CTCAGTGTGC AAGGCGAACC
GGCAAAAGGC GAAATGCTTG 1151 CGGGCACGGC CGTGTACAAC GGCGAAGTGC
TGCATTTCCA TATGGAAAAC 1201 GGCCGTCCGT CCCCGTCCGG AGGCAGGTTT
GCCGCAAAAG TCGATTTCGG 1251 CAGCAAATCT GTGGACGGCA TTATCGACAG
CGGCGATGAT TTGCATATGG 1301 GTACGCAAAA ATTCAAAGCC GTTATCGATG
GAAACGGCTT TAAGGGGACT 1351 TGGACGGAAA ATGGCGGCGG GGATGTTTCC
GGAAGGTTTT ACGGCCCGGC 1401 CGGCGAAGAA GTGGCGGGAA AATACAGCTA
TCGCCCGACA GATGCGGAAA 1451 AGGGCGGATT CGGCGTGTTT GCCGGCAAAA
AAGAGCAGGA TTGA
This corresponds to the amino acid sequence <SEQ ID 3108; ORF
287.a>:
TABLE-US-00086 a287.pep 1 MFKRSVIAMA CIVALSACGG GGGGSPDVKS
ADTLSKPAAP VVTEDVGEEV 51 LPKEKKDEEA VSGAPQADTQ DATAGKGGQD
MAAVSAENTG NGGAATTDNP 101 ENKDEGPQND MPQNAADTDS STPNHTPAPN
MPTRDMGNQA PDAGESAQPA 151 NQPDMANAAD GMQGDDPSAG ENAGNTADQA
ANQAENNQVG GSQNPASSTN 201 PNATNGGSDF GRINVANGIK LDSGSENVTL
THCKDKVCDR DFLDEEAPPK 251 SEFEKLSDEE KINKYKKDEQ RENFVGLVAD
RVEKNGTNKY VIIYKDKSAS 301 SSSARFRRSA RSRRSLPAEM PLIPVNQADT
LIVDGEAVSL TGHSGNIFAP 351 EGNYRYLTYG AEKLSGGSYA LSVQGEPAKG
EMLAGTAVYN GEVLHFHMEN 401 GRPSPSGGRF AAKVDFGSKS VDGIIDSGDD
LHMGTQKFKA VIDGNGFKGT 451 WTENGGGDVS GRFYGPAGEE VAGKYSYRPT
DAEKGGFGVF AGKKEQD* m287/a287 77.2% identity in 501 aa overlap 10
20 30 40 49 m287.pep
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE-----------KETEA
|||||||||||| |||||||||||||||||||||||||||||:| |: || a287
MFKRSVIAMACIVALSACGGGGGGSPDVKSADTLSKPAAPVVTEDVGEEVLPKEKKDEEA 10 20
30 40 50 60 50 60 70 80 90 100 109 m287.pep
KEDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQNDMPQNAAGT ||||
:| | :::|:||||||| ||||||||:|:|||:|:|| ||||||||| | a287
VSGAPQADTQ--DATAGKGGQDMAAVSAENTGNGGAATTDNPENKDEGPQNDMPQNAADT 70 80
90 100 110 110 120 130 140 150 160 169 m287.pep
DSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAADGMQGDDPSAGGQNAGNTA
||||||||| ||| : :| ||| |||||:||||||||||||||||||||||| :|||||| a287
DSSTPNHTPAPNMPTRDMGNQAPDAGESAQPANQPDMANAADGMQGDDPSAG-ENAGNTA 120
130 140 150 160 170 170 180 190 200 210 220 229 m287.pep
AQGANQAGNNQAAGSSDPIPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLTHCKGDS |:||||
|||::||::| ::|| :||||:|||:::|||: :|: |:|:|||||| a287
DQAANQAENNQVGGSQNPASSTNPNATNGGSDFGRINVANGIKLDSGSENVTLTHCKDKV 180
190 200 210 220 230 230 240 250 260 270 280 289 m287.pep
CSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKP |:
:|||||: ||||||||| :||::|||| : ::||||||| |: :| |:|:|:|| a287
CD-RDFLDEEAPPKSEFEKLSDEEKINKYKKDEQRENFVGLVADRVEKNGTNKYVIIYKD 240
250 260 270 280 290 290 300 310 320 330 340 m287.pep
KP--TSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRY | :|
||||||||||||||||||||||||||||||||||||||||||||||||||||| a287
KSASSSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRY 300
310 320 330 340 350 350 360 370 380 390 400 m287.pep
LTYGAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGRFAAKVDF
|||||||| |||||| |||||||||||||:||||||||||| ||||| |: ||||||||| a287
LTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHMENGRPSPSGGRFAAKVDF 360
370 380 390 400 410 410 420 430 440 450 460 m287.pep
GSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDVSGKFYGPAGEEVAGKYS
||||||||||||||||||||||||:||||||||||||||:|||||:|||||||||||||| a287
GSKSVDGIIDSGDDLHMGTQKFKAVIDGNGFKGTWTENGGGDVSGRFYGPAGEEVAGKYS 420
430 440 450 460 470 470 480 489 m287.pep YRPTDAEKGGFGVFAGKKEQDX
|||||||||||||||||||||| a287 YRPTDAEKGGFGVFAGKKEQDX 480 490
406 The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3109>:
TABLE-US-00087 m406.seq 1 ATGCAAGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGTAAACGCT 101 TTGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 CACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGTGGC GAATACATAA
ACAGCCCTGC CGTCCGTACC 301 GATTACACCT ATCCACGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACAGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CTCGCACCCA ATCAGACGGT AGCGGAAGTA
AAAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CTAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTACA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACAGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCAA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGGCCGTATA AAGTAAGCAA 801 AGGAATTAAA CCGACGGAAG GATTAATGGT
CGATTTCTCC GATATCCGAC 851 CATACGGCAA TCATACGGGT AACTCCGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GTAGTGCGAC AACATAGACA 951 AGGACAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 3110; ORF
406>:
TABLE-US-00088 m406.pep 1 MQARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSKSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIRPYGNHTG NSAPSVEADN 301 SHEGYGYSDE VVRQHRQGQP *
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3111>:
TABLE-US-00089 g406.seq 1 ATGCGGGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGCAAACGCT 101 TCGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 AACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGCGGC GAATACATAA
ACAGCCCTGC CGTCCGCACC 301 GATTACACCT ATCCGCGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACGGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CGCGCACCCA ATCAGACGGT AGCGGAAGTA
GGAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CCAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTGCA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACAGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCCA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGGCCGTATA AAGTAAGCAA 801 AGGAATCAAA CCGACGGAAG GATTGATGGT
CGATTTCTCC GATATCCAAC 851 CATACGGCAA TCATACGGGT AACTCCGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GCAGTGCGAC AACATAGACA 951 AGGGCAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 3112; ORF
406>:
TABLE-US-00090 g406.pep 1 MRARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSRSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIQPYGNHTG NSAPSVEADN 301 SHEGYGYSDE AVRQHRQGQP *
ORF 406 shows 98.8% identity over a 320 aa overlap with a predicted
ORF (ORF406.a) from N. gonorrhoeae:
TABLE-US-00091 g406/m406 10 20 30 40 50 60 g406.pep
MRARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR 10 20
30 40 50 60 70 80 90 100 110 120 g406.pep
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG 70 80
90 100 110 120 130 140 150 160 170 180 g406.pep
LTTSLSTLNAPALSRTQSDGSGSRSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m406
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF 130
140 150 160 170 180 190 200 210 220 230 240 g406.pep
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL 190
200 210 220 230 240 250 260 270 280 290 300 g406.pep
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIQPYGNHTGNSAPSVEADN
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| m406
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIRPYGNHTGNSAPSVEADN 250
260 270 280 290 300 310 320 g406.pep SHEGYGYSDEAVRQHRQGQPX
||||||||||:|||||||||| m406 SHEGYGYSDEVVRQHRQGQPX 310 320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3113>:
TABLE-US-00092 a406.seq 1 ATGCAAGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGTAAACGCT 101 TCGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 AACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGTGGC GAATACATAA
ACAGCCCTGC CGTCCGTACC 301 GATTACACCT ATCCACGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACAGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CGCGCACCCA ATCAGACGGT AGCGGAAGTA
AAAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CTAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTACA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACGGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCAA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGACCGTATA AAGTAAGCAA 801 AGGAATTAAA CCGACAGAAG GATTAATGGT
CGATTTCTCC GATATCCAAC 851 CATACGGCAA TCATATGGGT AACTCTGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GCAGTGCGAC GACATAGACA 951 AGGGCAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 3114; ORF
406.a>:
TABLE-US-00093 a406.pep 1 MQARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSKSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIQPYGNHMG NSAPSVEADN 301 SHEGYGYSDE AVRRHRQGQP * m406/a406 98.8%
identity in 320 aa overlap 10 20 30 40 50 60 m406.pep
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR 10 20
30 40 50 60 70 80 90 100 110 120 m406.pep
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG 70 80
90 100 110 120 130 140 150 160 170 180 m406.pep
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF 130
140 150 160 170 180 190 200 210 220 230 240 m406.pep
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL 190
200 210 220 230 240 250 260 270 280 290 300 m406.pep
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIRPYGNHTGNSAPSVEADN
||||||||||||||||||||||||||||||||||||||||||:||||| ||||||||||| a406
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIQPYGNHMGNSAPSVEADN 250
260 270 280 290 300 310 320 m406.pep SHEGYGYSDEVVRQHRQGQPX
||||||||||:||:||||||| a406 SHEGYGYSDEAVRRHRQGQPX 310 320
Example 2
Expression of ORF 919
[0303] The primer described in Table 1 for ORF 919 was used to
locate and clone ORF 919. The predicted gene 919 was cloned in pET
vector and expressed in E. coli. The product of protein expression
and purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 919-His fusion protein purification. Mice were
immunized with the purified 919-His and sera were used for Western
blot (panel B), FACS analysis (panel C), bactericidal assay (panel
D), and ELISA assay (panel E). Symbols: M1, molecular weight
marker; PP, purified protein, TP, N. meningitidis total protein
extract; OMV, N. meningitidis outer membrane vesicle preparation.
Arrows indicate the position of the main recombinant protein
product (A) and the N. meningitidis immunoreactive band (B). These
experiments confirm that 919 is a surface-exposed protein and that
it is a useful immunogen. The hydrophilicity plots, antigenic
index, and amphipatic regions of ORF 919 are provided in FIG. 10.
The AMPHI program is used to predict putative T-cell epitopes (Gao
et al 1989, J. Immunol 143:3007; Roberts et al. 1996, AIDS Res
Human Retroviruses 12:593; Quakyi et al. 1992, Scand J Immunol
Suppl 11:9). The nucleic acid sequence of ORF 919 and the amino
acid sequence encoded thereby is provided in Example 1.
Example 3
Expression of ORF 279
[0304] The primer described in Table 1 for ORF 279 was used to
locate and clone ORF 279. The predicted gene 279 was cloned in pGex
vector and expressed in E. coli. The product of protein expression
and purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 279-GST purification. Mice were immunized with the
purified 279-GST and sera were used for Western blot analysis
(panel B), FACS analysis (panel C), bactericidal assay (panel D),
and ELISA assay (panel E). Symbols: M1, molecular weight marker;
TP, N. meningitidis total protein extract; OMV, N. meningitidis
outer membrane vescicle preparation. Arrows indicate the position
of the main recombinant protein product (A) and the N. meningitidis
immunoreactive band (B). These experiments confirm that 279 is a
surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 279 are provided in FIG. 11. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 279 and the amino acid sequence encoded thereby is
provided in Example 1.
Example 4
Expression of ORF 576 and 576-1
[0305] The primer described in Table 1 for ORF 576 was used to
locate and clone ORF 576. The predicted gene 576 was cloned in pGex
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 576-GST fusion protein purification. Mice were
immunized with the purified 576-GST and sera were used for Western
blot (panel B), FACS analysis (panel C), bactericidal assay (panel
D), and ELISA assay (panel E). Symbols: M1, molecular weight
marker; TP, N. meningitidis total protein extract; OMV, N.
meningitidis outer membrane vescicle preparation. Arrows indicate
the position of the main recombinant protein product (A) and the N.
meningitidis immunoreactive band (B). These experiments confirm
that ORF 576 is a surface-exposed protein and that it is a useful
immunogen. The hydrophilicity plots, antigenic index, and
amphipatic regions of ORF 576 are provided in FIG. 12. The AMPHI
program is used to predict putative T-cell epitopes (Gao et al
1989, J. Immunol 143:3007; Roberts et al. 1996, AIDS Res Human
Retroviruses 12:593; Quakyi et al. 1992, Scand J Immunol Suppl
11:9). The nucleic acid sequence of ORF 576 and the amino acid
sequence encoded thereby is provided in Example 1.
Example 5
Expression of ORF 519 and 519-1
[0306] The primer described in Table 1 for ORF 519 was used to
locate and clone ORF 519. The predicted gene 519 was cloned in pET
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 519-His fusion protein purification. Mice were
immunized with the purified 519-His and sera were used for Western
blot (panel B), FACS analysis (panel C), bactericidal assay (panel
D), and ELISA assay (panel E). Symbols: M1, molecular weight
marker; TP, N. meningitidis total protein extract; OMV, N.
meningitidis outer membrane vesicle preparation. Arrows indicate
the position of the main recombinant protein product (A) and the N.
meningitidis immunoreactive band (B). These experiments confirm
that 519 is a surface-exposed protein and that it is a useful
immunogen. The hydrophilicity plots, antigenic index, and
amphipatic regions of ORF 519 are provided in FIG. 13. The AMPHI
program is used to predict putative T-cell epitopes (Gao et al
1989, J. Immunol 143:3007; Roberts et al. 1996, AIDS Res Human
Retroviruses 12:593; Quakyi et al. 1992, Scand J Immunol Suppl
11:9). The nucleic acid sequence of ORF 519 and the amino acid
sequence encoded thereby is provided in Example 1.
Example 6
Expression of ORF 121 and 121-1
[0307] The primer described in Table 1 for ORF 121 was used to
locate and clone ORF 121. The predicted gene 121 was cloned in pET
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 121-His fusion protein purification. Mice were
immunized with the purified 121-His and sera were used for Western
blot analysis (panel B), FACS analysis (panel C), bactericidal
assay (panel D), and ELISA assay (panel E). Results show that 121
is a surface-exposed protein. Symbols: M1, molecular weight marker;
TP, N. meningitidis total protein extract; OMV, N. meningitidis
outer membrane vescicle preparation. Arrows indicate the position
of the main recombinant protein product (A) and the N. meningitidis
immunoreactive band (B). These experiments confirm that 121 is a
surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 121 are provided in FIG. 14. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 121 and the amino acid sequence encoded thereby is
provided in Example 1.
Example 7
Expression of ORF 128 and 128-1
[0308] The primer described in Table 1 for ORF 128 was used to
locate and clone ORF 128. The predicted gene 128 was cloned in pET
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 128-His purification. Mice were immunized with the
purified 128-His and sera were used for Western blot analysis
(panel B), FACS analysis (panel C), bactericidal assay (panel D)
and ELISA assay (panel E). Results show that 128 is a
surface-exposed protein. Symbols: M1, molecular weight marker; TP,
N. meningitidis total protein extract; OMV, N. meningitidis outer
membrane vesicle preparation. Arrows indicate the position of the
main recombinant protein product (A) and the N. meningitidis
immunoreactive band (B). These experiments confirm that 128 is a
surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 128 are provided in FIG. 15. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 128 and the amino acid sequence encoded thereby is
provided in Example 1.
Example 8
Expression of ORF 206
[0309] The primer described in Table 1 for ORF 206 was used to
locate and clone ORF 206. The predicted gene 206 was cloned in pET
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 206-His purification. Mice were immunized with the
purified 206-His and sera were used for Western blot analysis
(panel B). It is worthnoting that the immunoreactive band in
protein extracts from meningococcus is 38 kDa instead of 17 kDa
(panel A). To gain information on the nature of this antibody
staining we expressed ORF 206 in E. coli without the His-tag and
including the predicted leader peptide. Western blot analysis on
total protein extracts from E. coli expressing this native form of
the 206 protein showed a recative band at a position of 38 kDa, as
observed in meningococcus. We conclude that the 38 kDa band in
panel B) is specific and that anti-206 antibodies, likely recognize
a multimeric protein complex. In panel C is shown the FACS
analysis, in panel D the bactericidal assay, and in panel E) the
ELISA assay. Results show that 206 is a surface-exposed protein.
Symbols: M1, molecular weight marker; TP, N. meningitidis total
protein extract; OMV, N. meningitidis outer membrane vesicle
preparation. Arrows indicate the position of the main recombinant
protein product (A) and the N. meningitidis immunoreactive band
(B). These experiments confirm that 206 is a surface-exposed
protein and that it is a useful immunogen. The hydrophilicity
plots, antigenic index, and amphipatic regions of ORF 519 are
provided in FIG. 16. The AMPHI program is used to predict putative
T-cell epitopes (Gao et al 1989, J. Immunol 143:3007; Roberts et
al. 1996, AIDS Res Human Retroviruses 12:593; Quakyi et al. 1992,
Scand J Immunol Suppl 11:9). The nucleic acid sequence of ORF 206
and the amino acid sequence encoded thereby is provided in Example
1.
Example 9
Expression of ORF 287
[0310] The primer described in Table 1 for ORF 287 was used to
locate and clone ORF 287. The predicted gene 287 was cloned in pGex
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 287-GST fusion protein purification. Mice were
immunized with the purified 287-GST and sera were used for FACS
analysis (panel B), bactericidal assay (panel C), and ELISA assay
(panel D). Results show that 287 is a surface-exposed protein.
Symbols: M1, molecular weight marker. Arrow indicates the position
of the main recombinant protein product (A). These experiments
confirm that 287 is a surface-exposed protein and that it is a
useful immunogen. The hydrophilicity plots, antigenic index, and
amphipatic regions of ORF 287 are provided in FIG. 17. The AMPHI
program is used to predict putative T-cell epitopes (Gao et al
1989, J. Immunol 143:3007; Roberts et al. 1996, AIDS Res Human
Retroviruses 12:593; Quakyi et al. 1992, Scand J Immunol Suppl
11:9). The nucleic acid sequence of ORF 287 and the amino acid
sequence encoded thereby is provided in Example 1.
Example 10
Expression of ORF 406
[0311] The primer described in Table 1 for ORF 406 was used to
locate and clone ORF 406. The predicted gene 406 was cloned in pET
vector and expressed in E. coli. The product of protein
purification was analyzed by SDS-PAGE. In panel A) is shown the
analysis of 406-His fusion protein purification. Mice were
immunized with the purified 406-His and sera were used for Western
blot analysis (panel B), FACS analysis (panel C), bactericidal
assay (panel D), and ELISA assay (panel E). Results show that 406
is a surface-exposed protein. Symbols: M1, molecular weight marker;
TP, N. meningitidis total protein extract; OMV, N. meningitidis
outer membrane vescicle preparation. Arrows indicate the position
of the main recombinant protein product (A) and the N. meningitidis
immunoreactive band (B). These experiments confirm that 406 is a
surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 406 are provided in FIG. 18. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 406 and the amino acid sequence encoded thereby is
provided in Example 1.
Example 11
[0312] Table 2 lists several Neisseria strains which were used to
assess the conservation of the sequence of ORF 225 among different
strains.
TABLE-US-00094 TABLE 2 225 gene variability: List of used Neisseria
strains Identification number Strains Source/reference Group B
zo01_225 NG6/88 R. Moxon/Seiler et al., 1996 zo02_225 BZ198 R.
Moxon/Seiler et al., 1996 zo03_225 NG3/88 R. Moxon/Seiler et al.,
1996 zo04_225 297-0 R. Moxon/Seiler et al., 1996 zo05_225 1000 R.
Moxon/Seiler et al., 1996 zo06_225 BZ147 R. Moxon/Seiler et al.,
1996 zo07_225 BZ169 R. Moxon/Seiler et al., 1996 zo08_225 528 R.
Moxon/Seiler et al., 1996 zo09_225 NGP165 R. Moxon/Seiler et al.,
1996 zo10_225 BZ133 R. Moxon/Seiler et al., 1996 zo11_225 NGE31 R.
Moxon/Seiler et al., 1996 zo12_225 NGF26 R. Moxon/Seiler et al.,
1996 zo13_225 NGE28 R. Moxon/Seiler et al., 1996 zo14_225 NGH38 R.
Moxon/Seiler et al., 1996 zo15_225 SWZ107 R. Moxon/Seiler et al.,
1996 zo16_225 NGH15 R. Moxon/Seiler et al., 1996 zo17_225 NGH36 R.
Moxon/Seiler et al., 1996 zo18_225 BZ232 R. Moxon/Seiler et al.,
1996 zo19_225 BZ83 R. Moxon/Seiler et al., 1996 zo20_225 44/76 R.
Moxon/Seiler et al., 1996 zo21_225 MC58 R. Moxon zo96_225 2996 Our
collection Group A zo22_225 205900 R. Moxon zo23_225 F6124 R. Moxon
z2491 Z2491 R. Moxon/Maiden et al., 1998 Group C zo24_225 90/18311
R. Moxon zo25_225 93/4286 R. Moxon Others zo26_225 A22 (group W) R.
Moxon/Maiden et al., 1998 zo27_225 E26 (group X) R. Moxon/Maiden et
al., 1998 zo28_225 860800 (group Y) R. Moxon/Maiden et al., 1998
zo29_225 E32 (group Z) R. Moxon/Maiden et al., 1998 Gonococcus
zo32_225 Ng F62 R. Moxon/Maiden et al., 1998 zo33_225 Ng SN4 R.
Moxon fa1090 FA1090 R. Moxon References: Seiler A. et al., Mol.
Microbiol., 1996, 19(4): 841-856. Maiden et al., Proc. Natl. Acad.
Sci. USA, 1998, 95: 3140-3145.
[0313] The amino acid sequences for each listed strain are as
follows:
TABLE-US-00095 >FA1090 <SEQ ID 3115>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
VNRAPARRAGNADELIGSAMGLNEQPVLPVNRAPARRAGNADELIGSAMG
LLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGAPVA
RSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHK
YWSGKYAFARRVKKNDPSRFLN* Z2491 <SEQ ID 3116>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRVPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNAD
ELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAMGINLPRTSAEQ
ARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNI
EITSLSHKYWSGKYAFARRVKKNDPSRFLN* ZO01_225 <SEQ ID 3117>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO02_225
<SEQ ID 3118>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO03_225
<SEQ ID 3119>
MDSFFKPAVWAVLWLMFAVRLALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO04_225
<SEQ ID 3120>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO05_225
<SEQ ID 3121>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGSAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO06_225
<SEQ ID 3122>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO07_225
<SEQ ID 3123>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO08_225
<SEQ ID 3124>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGSAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO09_225
<SEQ ID 3125>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO10_225
<SEQ ID 3126>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO11_225
<SEQ ID 3127>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNAD
ELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQ
ARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNI
EITSLSHKYWSGKYAFARRVKKNDPSRFLN* ZO12_225 <SEQ ID 3128>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO13_225
<SEQ ID 3129>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
VNRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FIQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO14_225
<SEQ ID 3130>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO15_225
<SEQ ID 3131>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGTPVA
RSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHK
YWSGKYAFARRVKKNDPSRFLN* ZO16_225 <SEQ ID 3132>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO17_225
<SEQ ID 3133>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO18_225
<SEQ ID 3134>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO19_225
<SEQ ID 3135>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO20_225
<SEQ ID 3136>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPINRAPARRAGNADELIGSAMG
LNEQPVLPVNRVPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNAD
ELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQ
ARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNI
EITSLSHKYWSGKYAFARRVKKNDPSRFLN* ZO21_225 <SEQ ID 3137>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO22_225
<SEQ ID 3138>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO23_225
<SEQ ID 3139>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO24_225
<SEQ ID 3140>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO25_225
<SEQ ID 3141>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO26_225
<SEQ ID 3142>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO27_225
<SEQ ID 3143>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO28_225
<SEQ ID 3144>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO29_225
<SEQ ID 3145>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N* ZO32_225
<SEQ ID 3146>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
VNRAPARRAGNADELIGSAMGLNEQPVLPVNRAPARRAGNADELIGSAMG
LLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGAPVA
RSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHK
YWSGKYAFARRVKKNDPSRFLN* ZO33_225 <SEQ ID 3147>
MDSFFKPAVWAVLWLMFAVRSALADELTNLLSSREQILRQFAEDEQPVLP
VNRAPARRAGNADELIGSAMGLNEQPVLPVNRAPARRAGNADELIGSAMG
LLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGAPVA
RSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHK
YWSGKYAFARRIKKNDPSRFLN* ZO96_225 <SEQ ID 3148>
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLP
INRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMG
LNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSG
FMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRIS
HVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFL N*
[0314] FIG. 19 shows the results of aligning the sequences of each
of these strains. Dark shading indicates regions of homology, and
gray shading indicates the conservation of amino acids with similar
characteristics. As is readily discernible, there is significant
conservation among the various strains of ORF 225, further
confirming its utility as an antigen for both vaccines and
diagnostics.
Example 12
[0315] Table 3 lists several Neisseria strains which were used to
assess the conservation of the sequence of ORF 235 among different
strains.
TABLE-US-00096 TABLE 3 235 gene variability: List of used Neisseria
strains Identification number Strains Reference Group B gnmzq01
NG6/88 Seiler et al., 1996 gnmzq02 BZ198 Seiler et al., 1996
gnmzq03 NG3/88 Seiler et al., 1996 gnmzq04 1000 Seiler et al., 1996
gnmzq05 1000 Seiler et al., 1996 gnmzq07 BZ169 Seiler et al., 1996
gnmzq08 528 Seiler et al., 1996 gnmzq09 NGP165 Seiler et al., 1996
gnmzq10 BZ133 Seiler et al., 1996 gnmzq11 NGE31 Seiler et al., 1996
gnmzq13 NGE28 Seiler et al., 1996 gnmzq14 NGH38 Seiler et al., 1996
gnmzq15 SWZ107 Seiler et al., 1996 gnmzq16 NGH15 Seiler et al.,
1996 gnmzq17 NGH36 Seiler et al., 1996 gnmzq18 BZ232 Seiler et al.,
1996 gnmzq19 BZ83 Seiler et al., 1996 gnmzq21 MC58 Virji et al.,
1992 Group A gnmzq22 205900 Our collection gnmzq23 F6124 Our
collection z2491 Z2491 Maiden et al., 1998 Group C gnmzq24 90/18311
Our collection gnmzq25 93/4286 Our collection Others gnmzq26 A22
(group W) Maiden et al., 1998 gnmzq27 E26 (group X) Maiden et al.,
1998 gnmzq28 860800 (group Y) Maiden et al., 1998 gnmzq29 E32
(group Z) Maiden et al., 1998 gnmzq31 N. lactamica Our collection
Gonococcus gnmzq32 Ng F62 Maiden et al., 1998 gnmzq33 Ng SN4 Our
collection fa1090 FA1090 Dempsey et al. 1991 References: Seiler A.
et al., Mol. Microbiol., 1996, 19(4): 841-856. Maiden R. et al.,
Proc. Natl. Acad. Sci. USA, 1998, 95: 3140-3145. Virji M. et al.,
Mol. Microbiol., 1992, 6: 1271-1279 Dempsey J. F. et al., J.
Bacteriol., 1991, 173: 5476-5486
[0316] The amino acid sequences for each listed strain are as
follows:
TABLE-US-00097 FA1090 <SEQ ID 3149>
MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPLNESPDV
NGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSR NGILKGPRFVEEQPK*
GNMZQ01 <SEQ ID 3150>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANNLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ02 <SEQ ID 3151>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ03 <SEQ ID 3152>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ04 <SEQ ID 3153>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ05 <SEQ ID 3154>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANNLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ07 <SEQ ID 3155>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ08 <SEQ ID 3156>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANNLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ09 <SEQ ID 3157>
MKPLILGLAAALVLSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGMLASTAEPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVQPEKL
HQIFGNDAVLYITITEYGTSYQILDSVTTVSARARLVDSRNGKVLWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ10 <SEQ ID 3158>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ11 <SEQ ID 3159>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ13 <SEQ ID 3160>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ14 <SEQ ID 3161>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ15 <SEQ ID 3162>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ16 <SEQ ID 3163>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ17 <SEQ ID 3164>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ18 <SEQ ID 3165>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ19 <SEQ ID 3166>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ21 <SEQ ID 3166>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ22 <SEQ ID 3167>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ23 <SEQ ID 3168>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH
NGILKGPRFVEEQPK* GNMZQ24 <SEQ ID 3169>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ25 <SEQ ID 3170>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ26 <SEQ ID 3171>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGMLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ27 <SEQ ID 3172>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ28 <SEQ ID 3173>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ29 <SEQ ID 3174>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH NGILKGPRFVEEQPK*
GNMZQ31 <SEQ ID 3175>
MKPLILGLAAVLALSACQVQKAPDFDYTAFKESKPASILVVPPLNESPDV
NGTWGMLASTAEPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITITEYGTSYQILDSVTTVSARARLVDSRNGKVLWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKAAAYDLLSPYSH NGILKGPRFVEEQPK*
GNMZQ32 <SEQ ID 3176>
MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPLNESPDV
NGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSR NGILKGPRFVEEQPK*
GNMZQ33 <SEQ ID 3177>
MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPLNESPDV
NGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSR NGILKGPRFVEEQPK*
Z2491 <SEQ ID 3178>
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDV
NGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKL
HQIFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA
SIREGSNNSNSGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSH
NGILKGPRFVEEQPK*
[0317] FIG. 20 shows the results of aligning the sequences of each
of these strains. Dark shading indicates regions of homology, and
gray shading indicates the conservation of amino acids with similar
characteristics. As is readily discernible, there is significant
conservation among the various strains of ORF 235, further
confirming its utility as an antigen for both vaccines and
diagnostics.
Example 13
[0318] Table 4 lists several Neisseria strains which were used to
assess the conservation of the sequence of ORF 287 among different
strains.
TABLE-US-00098 TABLE 4 287 gene variability: List of used Neisseria
strains Identification number Strains Reference Group B 287_2 BZ198
Seiler et al., 1996 287_9 NGP165 Seiler et al., 1996 287_14 NGH38
Seiler et al., 1996 287_21 MC58 Virji et al., 1992 Group A z2491
Z2491 Maiden et al., 1998 Gonococcus fa1090 FA1090 Dempsey et al.
1991 References: Seiler A. et al., Mol. Microbiol., 1996, 19(4):
841-856. Maiden R. et al., Proc. Natl. Acad. Sci. USA, 1998, 95:
3140-3145. Virji M. et al., Mol. Microbiol., 1992, 6: 1271-1279
Dempsey J. F. et al., J. Bacteriol., 1991, 173: 5476-5486
[0319] The amino acid sequences for each listed strain are as
follows:
TABLE-US-00099 287_14 <SEQ ID 3179>
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAK
EDAPQAGSQGQGAPSAQGGQDMAAVSEENTGNGGAAATDKPKNEDEGAQN
DMPQNAADTDSLTPNHTPASNMPAGNMENQAPDAGESEQPANQPDMANTA
DGMQGDDPSAGGENAGNTAAQGTNQAENNQTAGSQNPASSTNPSATNSGG
DFGRTNVGNSVVIDGPSQNITLTHCKGDSCSGNNFLDEEVQLKSEFEKLS
DADKISNYKKDGKNDGKNDKFVGLVADSVQMKGINQYIIFYKPKPTSFAR
FRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYR
YLTYGAEKLPGGSYALRVQGEPSKGEMLAGTAVYNGEVLHFHTENGRPSP
SRGRFAAKVDFGSKSVDGIIDSGDGLHMGTQKFKAAIDGNGFKGTWTENG
GGDVSGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD* 287_2 <SEQ ID
3180> MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAK
EDAPQAGSQGQGAPSAQGGQDMAAVSEENTGNGGAAATDKPKNEDEGAQN
DMPQNAADTDSLTPNHTPASNMPAGNMENQAPDAGESEQPANQPDMANTA
DGMQGDDPSAGGENAGNTAAQGTNQAENNQTAGSQNPASSTNPSATNSGG
DFGRTNVGNSVVIDGPSQNITLTHCKGDSCSGNNFLDEEVQLKSEFEKLS
DADKISNYKKDGKNDGKNDKFVGLVADSVQMKGINQYIIFYKPKPTSFAR
FRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYR
YLTYGAEKLPGGSYALRVQGEPSKGEMLAGTAVYNGEVLHFHTENGRPSP
SRGRFAAKVDFGSKSVDGIIDSGDGLHMGTQKFKAAIDGNGFKGTWTENG
GGDVSGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD* 287_21. <SEQ ID
3181> MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAK
EDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQN
DMPQNAAGTDSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAA
DGMQGDDPSAGGQNAGNTAAQGANQAGNNQAAGSSDPIPASNPAPANGGS
NFGRVDLANGVLIDGPSQNITLTHCKGDSCSGNNFLDEEVQLKSEFEKLS
DADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKPKPTSFARFRRS
ARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLTY
GAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGR
FAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDV
SGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD* 287_9 <SEQ ID 3182>
MFKRSVIAMACIVALSACGGGGGGSPDVKSADTLSKPAAPVVTEDVGEEV
LPKEKKDEEAVSGAPQADTQDATAGKGGQDMAAVSAENTGNGGAATTDNP
ENKDEGPQNDMPQNAADTDSSTPNHTPAPNMPTRDMGNQAPDAGESAQPA
NQPDMANAADGMQGDDPSAGENAGNTADQAANQAENNQVGGSQNPASSTN
PNATNGGSDFGRINVANGIKLDSGSENVTLTHCKDKVCDRDFLDEEAPPK
SEFEKLSDEEKINKYKKDEQRENFVGLVADRVEKNGTNKYVIIYKDKSAS
SSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAP
EGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHMEN
GRPSPSGGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAVIDGNGFKGT
WTENGGGDVSGRFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD* FA1090 <SEQ ID
3183> MFKRSVIAMACIFPLSACGGGGGGSPDVKSADTPSKPAAPVVAENAGEGV
LPKEKKDEEAAGGAPQADTQDATAGEGSQDMAAVSAENTGNGGAATTDNP
KNEDAGAQNDMPQNAAESANQTGNNQPAGSSDSAPASNPAPANGGSDFGR
TNVGNSVVIDGPSQNITLTHCKGDSCNGDNLLDEEAPSKSEFEKLSDEEK
IKRYKKDEQRENFVGLVADRVKKDGTNKYIIFYTDKPPTRSARSRRSLPA
EIPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLTYGAEKLPGGS
YALRVQGEPAKGEMLVGTAVYNGEVLHFHMENGRPYPSGGRFAAKVDFGS
KSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRFYGPAG
EEVAGKYSYRPTDAEKGGFGVFAGKKDRD* Z2491 <SEQ ID 3184>
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSEKETEAK
EDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQN
DMPQNAAGTDSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAA
DGMQGDDPSAGGQNAGNTAAQGANQAGNNQAAGSSDPIPASNPAPANGGS
NFGRVDLANGVLIDGPSQNITLTHCKGDSCSGNNFLDEEVQLKSEFEKLS
DADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKPKPTSFARFRRS
ARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLTY
GAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGR
FAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDV
SGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD*
[0320] FIG. 21 shows the results of aligning the sequences of each
of these strains. Dark shading indicates regions of homology, and
gray shading indicates the conservation of amino acids with similar
characteristics. As is readily discernible, there is significant
conservation among the various strains of ORF 225, further
confirming its utility as an antigen for both vaccines and
diagnostics.
Example 14
[0321] Table 5 lists several Neisseria strains which were used to
assess the conservation of the sequence of ORF 519 among different
strains.
TABLE-US-00100 TABLE 5 519 gene variability: List of used Neisseria
strains Identification number Strains Source/reference Group B
zv01_519 NG6/88 R. Moxon/Seiler et al., 1996 zv02_519 BZ198 R.
Moxon/Seiler et al., 1996 zv03_519ass NG3/88 R. Moxon/Seiler et
al., 1996 zv04_519 297-0 R. Moxon/Seiler et al., 1996 zv05_519 1000
R. Moxon/Seiler et al., 1996 zv06_519ass BZ147 R. Moxon/Seiler et
al., 1996 zv07_519 BZ169 R. Moxon/Seiler et al., 1996 zv11_519
NGE31 R. Moxon/Seiler et al., 1996 zv12_519 NGF26 R. Moxon/Seiler
et al., 1996 zv18_519 BZ232 R. Moxon/Seiler et al., 1996 zv19_519
BZ83 R. Moxon/Seiler et al., 1996 zv20_519ass 44/76 R. Moxon/Seiler
et al., 1996 zv21_519ass MC58 R. Moxon zv96_519 2996 Our collection
Group A zv22_519ass 205900 R. Moxon z2491_519 Z2491 R. Moxon/Maiden
et al., 1998 Others zv26_519 A22 (group W) R. Moxon/Maiden et al.,
1998 zv27_519 E26 (group X) R. Moxon/Maiden et al., 1998 zv28_519
860800 (group Y) R. Moxon/Maiden et al., 1998 zv29_519ass E32
(group Z) R. Moxon/Maiden et al., 1998 Gonococcus zv32_519 Ng F62
R. Moxon/Maiden et al., 1998 fa1090_519 FA1090 R. Moxon References:
Seiler A. et al., Mol. Microbiol., 1996, 19(4): 841-856. Maiden et
al., Proc. Natl. Acad. Sci. USA, 1998, 95: 3140-3145.
[0322] The amino acid sequences for each listed strain are as
follows:
TABLE-US-00101 FA1090_519 <SEQ ID 3185>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
Z2491_519 <SEQ ID 3186>
MEFFIILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV01_519 <SEQ ID 3187>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV02_519 <SEQ ID 3188>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV03_519 <SEQ ID 3189>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV04_519 <SEQ ID 3190>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV05_519 <SEQ ID 3191>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV06_519ASS <SEQ ID 3192>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVFSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAERKKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV07_519 <SEQ ID 3193>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV11_519 <SEQ ID 3194>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV12_519 <SEQ ID 3195>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV18_519 <SEQ ID 3196>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV19_519 <SEQ ID 3197>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV20_519ASS <SEQ ID 3198>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSM ISAGMKIIDSSKTAK*
ZV21_519ASS <SEQ ID 3199>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV22_519ASS <SEQ ID 3200>
MEFFIILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAKIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV26_519 <SEQ ID 3201>
MEFFIILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV27_519 <SEQ ID 3202>
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV28_519 <SEQ ID 3203>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV29_519ASS <SEQ ID 3204>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSIVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREPEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSNKTAK*
ZV32_519 <SEQ ID 3205>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWG
VKVLRYEIKDLVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL ISAGMKIIDSSKTAK*
ZV96_519 <SEQ ID 3206>
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPF
IDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGS
SNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWG
VKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLAS
GQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAI
RQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL
ISAGMKIIDSSKTAK*
[0323] FIG. 22 shows the results of aligning the sequences of each
of these strains. Dark shading indicates regions of homology, and
gray shading indicates the conservation of amino acids with similar
characteristics. As is readily discernible, there is significant
conservation among the various strains of ORF 225, further
confirming its utility as an antigen for both vaccines and
diagnostics.
Example 15
[0324] Table 6 lists several Neisseria strains which were used to
assess the conservation of the sequence of ORF 919 among different
strains.
TABLE-US-00102 TABLE 6 919 gene variability: List of used Neisseria
strains Identification number Strains Source/reference Group B zm01
NG6/88 R. Moxon/Seiler et al., 1996 zm02 BZ198 R. Moxon/Seiler et
al., 1996 zm03 NG3/88 R. Moxon/Seiler et al., 1996 zm04 297-0 R.
Moxon/Seiler et al., 1996 zm05 1000 R. Moxon/Seiler et al., 1996
zm06 BZ147 R. Moxon/Seiler et al., 1996 zm07 BZ169 R. Moxon/Seiler
et al., 1996 zm08n 528 R. Moxon/Seiler et al., 1996 zm09 NGP165 R.
Moxon/Seiler et al., 1996 zm10 BZ133 R. Moxon/Seiler et al., 1996
zm11asbc NGE31 R. Moxon/Seiler et al., 1996 zm12 NGF26 R.
Moxon/Seiler et al., 1996 zm13 NGE28 R. Moxon/Seiler et al., 1996
zm14 NGH38 R. Moxon/Seiler et al., 1996 zm15 SWZ107 R. Moxon/Seiler
et al., 1996 zm16 NGH15 R. Moxon/Seiler et al., 1996 zm17 NGH36 R.
Moxon/Seiler et al., 1996 zm18 BZ232 R. Moxon/Seiler et al., 1996
zm19 BZ83 R. Moxon/Seiler et al., 1996 zm20 44/76 R. Moxon/Seiler
et al., 1996 zm21 MC58 R. Moxon zm96 2996 Our collection Group A
zm22 205900 R. Moxon zm23asbc F6124 R. Moxon z2491 Z2491 R.
Moxon/Maiden et al., 1998 Group C zm24 90/18311 R. Moxon zm25
93/4286 R. Moxon Others zm26 A22 (group W) R. Moxon/Maiden et al.,
1998 zm27bc E26 (group X) R. Moxon/Maiden et al., 1998 zm28 860800
(group Y) R. Moxon/Maiden et al., 1998 zm29asbc E32 (group Z) R.
Moxon/Maiden et al., 1998 zm31asbc N. lactamica R. Moxon Gonococcus
zm32asbc Ng F62 R. Moxon/Maiden et al., 1998 zm33asbc Ng SN4 R.
Moxon fa1090 FA1090 R. Moxon References: Seiler A. et al., Mol.
Microbiol., 1996, 19(4): 841-856. Maiden et al., Proc. Natl. Acad.
Sci. USA, 1998, 95: 3140-3145.
[0325] The amino acid sequences for each listed strain are as
follows:
TABLE-US-00103 FA1090 <SEQ ID 3207>
MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPAGIPDPA
GTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGR
RTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGNEGPVGALG
TPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* Z2491 <SEQ ID
3208> MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSVQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM01 <SEQ ID 3209>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM02 <SEQ ID 3210>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM03 <SEQ ID 3211>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM04 <SEQ ID 3212>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM05 <SEQ ID 3213>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLSCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM06 <SEQ ID 3214>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM07 <SEQ ID 3215>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM08N <SEQ ID
3216> MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM09 <SEQ ID 3217>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM10 <SEQ ID 3218>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM11ASBC <SEQ ID
3219> MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSVQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM12 <SEQ ID 3220>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM13 <SEQ ID 3221>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAEQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM14 <SEQ ID 3222>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSRNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM15 <SEQ ID 3223>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDLA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNHQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM16 <SEQ ID 3224>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPGRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM17 <SEQ ID 3225>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM18 <SEQ ID 3226>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM19 <SEQ ID 3227>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM20 <SEQ ID 3228>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM21 <SEQ ID 3229>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM22 <SEQ ID 3230>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSVQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM23ASBC <SEQ ID
3231> MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTSKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGETAGKMKEPGYVWQLLPNGMKPEYRP* ZM24
<SEQ ID 3232>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM25 <SEQ ID 3233>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPAPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGKYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM26 <SEQ ID 3234>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSVQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM27BC <SEQ ID
3235> MKKYLFRAALYGISAAILAACQSKSIQTFPQPDTSVINGPDRPAGIPDPA
GTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGETAGKMKEPGYVWQLLPNGMKPEYRP* ZM28 <SEQ ID 3236>
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM29ASBC <SEQ ID
3237> MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELTGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATTHPITRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM31ASBC <SEQ ID
3238> MKKHLFRAALYGIAAAILAACQSKSIQTFPQPDTSIIKGPDRPAGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYVFFRELAGSGNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM32ASBC <SEQ ID
3239> MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPAGIPDPA
GTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGR
RTERARFPIYGIPDDFISVPLPAGLRGGKALVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGGDGPVGALG
TPLMGGYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM33ASBC <SEQ ID
3240> MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPAGIPDPA
GTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGR
RTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKSYMRQNPHKLAEVLGQNPSYIFFRELAGSGNEGPVGALG
TPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP* ZM96 <SEQ ID 3241>
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPA
GTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDV
CAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDR
RTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGT
HTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYA
EDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
KLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKG
AVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP*
[0326] FIG. 23 shows the results of aligning the sequences of each
of these strains. Dark shading indicates regions of homology, and
gray shading indicates the conservation of amino acids with similar
characteristics. As is readily discernible, there is significant
conservation among the various strains of ORF 225, further
confirming its utility as an antigen for both vaccines and
diagnostics.
Example 16
[0327] Using the above-described procedures, the following
oligonucleotide primers were employed in the polymerase chain
reaction (PCR) assay in order to clone the ORFs as indicated:
TABLE-US-00104 TABLE 7 Oligonucleotides used for PCR to amplify
complete or partial ORFs Restriction ORF primer Sequence sites 001
Forward CGCGGATCCCATATG-TGGATGGTGCTGGTCAT BamHI- NdeI Reverse
CCCGCTCGAG-TGCCGTCTTGTCCCAC XhoI 003 Forward
CGCGGATCCCATATG-GTCGTATTCGTGGC BamHI- NdeI Reverse
CCCGCTCGAG-AAAATCATGAACACGCGC XhoI 005 Forward
CGCGGATCCCATATG-GACAATATTGACATGT BamHI- NdeI Reverse
CCCGCTCGAG-CATCACATCCGCCCG XhoI 006 Forward
CGCGGATCCCATATG-CTGCTGGTGCTGG BamHI- NdeI Reverse
CCCGCTCGAG-AGTTCCGGCTTTGATGT XhoI 007 Forward
CGCGGATCCCATATG-GCCGACAACAGCATCAT BamHI- NdeI Reverse
CCCGCTCGAG-AAGGCGTTCATGATATAAG XhoI 008 Forward
CGCGGATCCCATATG-AACAACAGACATTTTG BamHI- NdeI Reverse
CCCGCTCGAG-CCTGTCCGGTAAAAGAC XhoI 009 Forward
CGCGGATCCCATATG-CCCCGCGCTGCT BamHI- NdeI Reverse
CCCGCTCGAG-TGGCTTTTGCCACGTTTT XhoI 011 Forward
CGCGGATCCCATATG-AAGACACACCGCAAG BamHI- NdeI Reverse
CCCGCTCGAG-GGCGGTCAGTACGGT XhoI 012 Forward
CGCGGATCCCATATG-CTCGCCCGTTGCC BamHI- NdeI Reverse
CCCGCTCGAG-AGCGGGGAAGAGGCAC XhoI 013 Forward
CGCGGATCCCATATG-CCTTTGACCATGCT BamHI- NdeI Reverse
CCCGCTCGAG-CTGATTCGGCAAAAAAATCT XhoI 018 Forward
CGCGGATCCCATATG-CAGCAGAGGCAGTT BamHI- NdeI Reverse
CCCGCTCGAG-GACGAGGCGAACGCC XhoI 019 Forward
AAAGAATTC-CTGCCAGCCGGCAAGACCCCGGC Eco RI Reverse
AAACTGCAG-TCAGCGGGCGGGGACAATGCCCAT Pst I 023 Forward
AAAGAATTC-AAAGAATATTCGGCATGGCAGGC Eco RI Reverse
AAACTGCAG-TTACCCCCAAATCACTTTAACTGA Pst I 025 Forward
AAAGAATTC-TGCGCCACCCAACAGCCTGCTCC Eco RI Reverse
AAACTGCAG-TCAGAACGCGATATAGCTGTTCGG Pst I 031 Forward
CGCGGATCCCATATG-GTCTCCCTTCGCTT BamHI- NdeI Reverse
CCCGCTCGAG-ATGTAAGACGGGGACAAC XhoI 032 Forward
CGCGGATCCCATATG-CGGCGAAACGTGC BamHI- NdeI Reverse
CCCGCTCGAG-CTGGTTTTTTGATATTTGTG XhoI 033 Forward
CGCGGATCCCATATG-GCGGCGGCAGACA BamHI- NdeI Reverse
CCCGCTCGAG-ATTTGCCGCATCCCGAT XhoI 034 Forward
CGCGGATCCCATATG-GCCGAAAACAGCTACGG BamHI- NdeI Reverse
CCCGCTCGAG-TTTGACGATTTGGTTCAATT XhoI 036 Forward
CGCGGATCCCATATG-CTGAAGCCGTGCG BamHI- NdeI Reverse
CCCGCTCGAG-CCGGACTGCGTATCGG XhoI 038 Forward
CGCGGATCCCATATG-ACCGATTTCCGCCA BamHI- NdeI Reverse
CCCGCTCGAG-TTCTACGCCGTACTGCC XhoI 039 Forward
CGCGGATCCCATATG-CCGTCCGAACCGC BamHI- NdeI Reverse
CCCGCTCGAG-TAGGATGACGAGGTAGG XhoI 041 Forward
CGCGGATCCCATATG-TTCGTGCGCGAACCGC BamHI- NdeI Reverse
CCCGCTCGAG-GCCCAAAAACTCTTTCAAA XhoI 042 Forward
CGCGGATCCCATATG-ACGATGATTTGCTTGC BamHI- NdeI Reverse
CCCGCTCGAG-TTTGCAGCCTGCATTTGAC XhoI 043 Forward
AAAAAAGGTACC-ATGGTTGTTTCAAATCAAAATATC Kpn I Reverse
AAACTGCAG-TTATTGCGCTTCACCTTCCGCCGC Pst I 043a Forward
AAAAAAGGTACC-GCAAAAGTGCATGGCGGCTTGGACGGTGC Kpn I Reverse
AAAAAACTGCAG- Pst I TTAATCCTGCAACACGAATTCGCCCGTCCG 044 Forward
CGCGGATCCCATATG-CCGTCCGACTAGAG BamHI- NdeI Reverse
CCCGCTCGAG-ATGCGCTACGGTAGCCA XhoI 046 Forward
AAAGAATTC-ATGTCGGCAATGCTCCCGACAAG Eco RI Reverse
AAACTGCAG-TCACTCGGCGACCCACACCGTGAA Pst I 047 Forward
CGCGGATCCCATATG-GTCATCATACAGGCG BamHI- NdeI Reverse
CCCGCTCGAG-TCCGAAAAAGCCCATTTTG XhoI 048 Forward
AAAGAATTC-ATGCTCAACAAAGGCGAAGAATTGCC Eco RI Reverse
AAACTGCAG-TCAAGATTCGACGGGGATGATGCC Pst I 049 Forward
AAAGAATTC-ATGCGGGCGCAGGCGTTTGATCAGCC Eco RI Reverse
AAACTGCAG-AAGGCGTATCTGAAAAAATGGCAG Pst I 050 Forward
CGCGGATCCCATATG-GGCGCGGGCTGG BamHI- NdeI Reverse
CCCGCTCGAG-AATCGGGCCATCTTCGA XhoI 052 Forward
AAAAAAGAATTC-ATGGCTTTGGTGGCGGAGGAAAC Eco RI Reverse
AAAAAAGTCGAC-TCAGGCGGCGTTTTTCACCTTCCT Sal I 052a Forward
AAAAAAGAATTC-GTGGCGGAGGAAACGGAAATATCCGC Eco RI Reverse
AAAAAACTGCAG-TTAGCTGTTTTTGGAAACGCCGTCCAACCC Pst I 073 Forward
CGCGGATCCCATATG-TGTATGCCATATAAGAT BamHI- NdeI Reverse
CCCGCTCGAG-CACCGGATTGTCCGAC XhoI 075 Forward
CGCGGATCCCATATG-CCGTCTTACTTCATC BamHI- NdeI Reverse
CCCGCTCGAG-ATCACCAATGCCGATTATTT XhoI 077a Forward
AAAAAAGAATTC-GGCGGCATTTTCATCGACACCTTCCT Eco RI Reverse
AAAAAACTGCAG-TCAGACGAACATCTGCACAAACGCAAT Pst I 080 Forward
AAAGAATTC-GCGTCCGGGCTGGTTTGGTTTTACAATTC Eco RI Reverse
AAACTGCAG-CTATTCTTCGGATTCTTTTTCGGG Pst I 081 Forward
AAAGAATTC-ATGAAACCACTGGACCTAAATTTCATCTG Eco RI Reverse
AAACTGCAG-TCACTTATCCTCCAATGCCTC Pst I 082 Forward
AAAGAATTC-ATGTGGTTGTTGAAGTTGCCTGC Eco RI Reverse
AAACTGCAG-TTACGCGGATTCGGCAGTTGG Pst I 084 Forward
AAAGAATTC-TATCACCCAGAATATGAATACGGCTACCG Eco RI Reverse
AAACTGCAG-TTATACTTGGGCGCAACATGA Pst I 085 Forward
CGCGGATCCCATATG-GGTAAAGGGCAGGACT BamHI- NdeI Reverse
CCCGCTCGAG-CAAAGCCTTAAACGCTTCG XhoI 086 Forward
AAAAAAGGTACC-TATTTGGCATCAAAAGAAGGCGG Kpn I Reverse
AAACTGCAG-TTACTCCACCCGATAACCGCG Pst I 087 Forward
AAAGAATTC-ATGGGCGGTAAAACCTTTATGC Eco RI Reverse
AAACTGCAG-TTACGCCGCACACGCAATCGC Pst I 087a Forward
AAAAAAGAATTC-AAGCTATTAGGCGTGCCGATTGTGATTCA Eco RI Reverse
AAAAAACTGCAG-TTACGCCTGCAAGATGCCCAGCTTGCC Pst I 088 Forward
AAAAAAGAATTC-ATGTTTTTATGGCTCGCACATTTCAG Eco RI Reverse
AAAAAACTGCAG-TCAGCGGATTTTGAGGGTACTCAAACC Pst I 089 Forward
CGCGGATCCCATATG-CCGCCCAAAATCAC BamHI- NdeI Reverse
CCCGCTCGAG-TGCGCATACCAAAGCCA XhoI 090 Forward
CGCGGATCCCATATG-CGCATAGTCGAGCA BamHI- NdeI Reverse
CCCGCTCGAG-AGCAAAACGGCGGTACG XhoI 091 Forward
AAAGAATTC-ATGGAAATACCCGTACCGCCGAGTCC Eco RI Reverse
AAACTGCAG-TCAGCGCAGGGGGTAGCCCAAGCC Pst I 092 Forward
AAAGAATTC-ATGTTTTTTATTTCAATCCG Eco RI Reverse
AAACTGCAG-TCAAATCTGTTTCGACAATGC Pst I 093 Forward
AAAGAATTC-ATGCAGAATTTTGGCAAAGTGGC Eco RI Reverse
AAACTGCAG-CTATGGCTCGTCATACCGGGC Pst I 094 Forward
AAAGAATTC-ATGCCGTCACGGAAGCGCATCAACTC Eco RI Reverse
AAACTGCAG-TTATCCCGGCCATACCGCCGAACA Pst I 095 Forward
AAAGAATTC-ATGTCCTTTCATTTGAACATGGACGG Eco RI Reverse
AAACTGCAG-TCAACGCCGCAGGCACTAACGCCC Pst I 096 Forward
AAAGAATTC-ATGGCTCGTCATACCGGGCAGGG Eco RI Reverse
AAACTGCAG-TCAAAGGAAAAGGCCGTCTGAAAAGCG Pst I 097 Forward
AAAGAATTC-ATGGACACTTCAAAACAAACACTGTTG Eco RI Reverse
AAACTGCAG-TCAGCCCAAATACCAGAATTTCAG Pst I 098 Forward
AAAGAATTC-GATGAACGCAGCCCAGCATGGATACG Eco RI Reverse
AAACTGCAG-TTACGACATTCTGATTTGGCA Pst I 102 Forward
AAAAAAGAATTC-GGCCTGATGATTTTGGAAGTCAACAC Eco RI Reverse
AAAAAACTGCAG-TTATCCTTTAAATACGGGGACGAGTTC Pst I 105 Forward
CGCGGATCCCATATG-TCCGCAAACGAATACG BamHI- NdeI Reverse
CCCGCTCGAG-GTGTTCTGCCAGTTTCAG XhoI 107 Forward AAAAAAGAATTC- Eco RI
CTGATGATTTTGGAAGTCAACACCCATTATCC Reverse
AAAAAACTGCAG-TTATCCTTTAAATACGGGGACGAGTTC Pst I 107b Forward
AAAAAAGAATTC- Eco RI GATACCCAAGCCCCCGCCGGCACAAACTACTG Reverse
AAAAAACTGCAG- Pst I TTACGCGTCGCCTTTAAAGTATTTGAGCAGGCTGGAGAC 108
Forward AAAGAATTC-ATGTTGCCGGGCTTCAACCG Eco RI Reverse
AAACTGCAG-TTAGCGGTACAGGTGTTTGAAGCA Pst I 108a Forward
AAAAAAGAATTC-GGTAACACATTCGGCAGCTTAGACGGTGG Eco RI Reverse
AAACTGCAG-TTAGCGGTACAGGTGTTTGAAGCA Pst I 109 Forward
AAAGAATTC-ATGTATTATCGCCGGGTTATGGG Eco RI Reverse
AAACTGCAG-CTAGCCCAAAGATTTGAAGTGTTC Pst I 111 Forward
CGCGGATCCCATATG-TGTTCGGAACAAACCGC BamHI- NdeI Reverse
CCCGCTCGAG-GCGGAGCAGTTTTTCAAA XhoI 114 Forward
CGCGGATCCCATATG-GCTTCCATCACTTCGC BamHI- NdeI Reverse
CCCGCTCGAG-CATCCGCGAAATCGTC XhoI 117 Forward
AAAAAAGGTACC-ATGGTCGAAGAACTGGAACTGCTG Kpn I Reverse
AAACTGCAG-TTAAAGCCGGGTAACGCTCAATAC Pst I 118 Forward
AAAGTCGACATGTGTGAGTTCAAGGATATTATAAG Sal I Reverse
AAAGCATGC-CTATTTTTTGTTGTAATAATCAAATC Sph I 121 Forward
CGCGGATCCCATATG-GAAACACAGCTTTACAT BamHI- NdeI Reverse
CCCGCTCGAG-ATAATAATATCCCGCGCCC XhoI 122 Forward
CGCGGATCCCATATG-GTCATGATTAAAATCCGCA BamHI- NdeI Reverse
CCCGCTCGAG-AATCTTGGTAGATTGGATTT XhoI 125 Forward
AAAGAATTC-ATGTCGGGCAATGCCTCCTCTCC Eco RI Reverse
AAACTGCAG-TCACGCCGTTTCAAGACG Pst I
125a Forward AAAAAAGAATTC-ACGGCAGGCAGCACCGCCGCACAGGTTTC Eco RI
Reverse AAAAAACTGCAG- Pst I TTATTTTGCCACGTCGGTTTCTCCGGTGAACAACGC
126 Forward CGCGGATCCCATATG-CCGTCTGAAACCC BamHI- NdeI Reverse
CCCGCTCGAG-ATATTCCGCCGAATGCC XhoI 127 Forward
AAAGAATTC-ATGGAAATATGGAATATGTTGGACACTTG Eco RI Reverse
AAACTGCAG-TTAAAGTGTTTCGGAGCCGGC Pst I 127a Forward
AAAAAAGAATTC-AAGGAACTGATTATGTGTCTGTCGGG Eco RI Reverse
AAACTGCAG-TTAAAGTGTTTCGGAGCCGGC Pst I 128 Forward
CGCGGATCCCATATG-ACTGACAACGCACT BamHI- NdeI Reverse
CCCGCTCGAG-GACCGCGTTGTCGAAA XhoI 130 Forward
CGCGGATCCCATATG-AAACAACTCCGCGA BamHI- NdeI Reverse
CCCGCTCGAG-GAATTTTGCACCGGATTG XhoI 132 Forward
AAAGAATTC-ATGGAACCCTTCAAAACCTTAATTTG Eco RI Reverse
AAAAAACTGCAG-TCACCATGTCGGCATTTGAAAAAC Pst I 134 Forward
CGCGGATCCCATATG-TCCCAAGAAATCCTC BamHI- NdeI Reverse
CCCGCTCGAG-CAGTTTGACCGAATGTTC XhoI 135 Forward
CGCGGATCCCATATG-AAATACAAAAGAATCGTATT BamHI- NdeI Reverse
CCCGCTCGAG-AAATTCGGTCAGAAGCAGG XhoI 137 Forward
AAAAAAGGTACC-ATGATTACCCATCCCCAATTCGATCC Kpn I Reverse
AAAAAACTGCAG-TCAGTGCTGTTTTTTCATGCCGAA Pst I 137a Forward
AAAAAAGAATTC-GGCCGCAAACACGGCATCGGCTTCCT Eco RI Reverse
AAAAAACTGCAG-TTAAGCGGGATGACGCGGCAGCATACC Pst I 138 Forward
AAAAAAGAATTC-AACTCAGGCGAAGGAGTGCTTGTGGC Eco RI Reverse
AAAAAATCTAGA-TCAGTTTAGGGATAGCAGGCGTAC Xba I 141 Forward
AAAGAATTC-ATGAGCTTCAAAACCGATGCCGAAATCGC Eco RI Reverse
AAACTGCAG-TCAGAACAAGCCGTGAATCACGCC Pst I 142 Forward
CGCGGATCCCATATG-CGTGCCGATTTCATG BamHI- NdeI Reverse
CCCGCTCGAG-AAACTGCTGCACATGGG XhoI 143 Forward AAAAAAGAATTC- Eco RI
ATGCTCAGTTTCGGCTTTCTCGGCGTTCAGAC Reverse
AAAAAACTGCAG-TCAAACCCCGCCGTGTGTTTCTTTAAT Pst I 144 Forward
AAAAAAGAATTC-GGTCTGATCGACGGGCGTGCCGTAAC Eco RI Reverse
AAAAAATCTAGA-TCGGCATCGGCCGGCATATGTCCG Xba I 146 Forward
AAAAAAGAATTC- Eco RI CGCCAAGTCGTCATTGACCACGACAAAGTC Reverse
AAAAAACTGCAG-TTAGGCATCGGCAAATAGGAAACTGGG Pst I 147 Forward
AAAAAAGAATTC-ACTGAGCAATCGGTGGATTTGGAAAC Eco RI Reverse
AAAAAATCTAGA-TTAGGTAAAGCTGCGGCCCATTTGCGG Xba I 148 Forward
AAAAAAGAATTC- Eco RI ATGGCGTTAAAAACATCAAACTTGGAACACGC Reverse
AAAAAATCTAGA-TCAGCCCTTCATACAGCCTTCGTTTTG Xba I 149 Forward
CGCGGATCCCATATG-CTGCTTGACAACAAAGT BamHI- NdeI Reverse
CCCGCTCGAG-AAACTTCACGTTCACGCC XhoI 150 Forward
CGCGGATCCCATATG-CAGAACACAAATCCG BamHI- NdeI Reverse
CCCGCTCGAG-ATAAACATCACGCTGATAGC XhoI 151 Forward AAAAAAGAATTC- Eco
RI ATGAAACAAATCCGCAACATCGCCATCATCGC Reverse
AAAAAACTGCAG-TCAATCCAGCTTTTTAAAGTGGCGGCG Pst I 152 Forward
AAAAAAGAATTC- Eco RI ATGAAAAACAAAACCAAAGTCTGGGACCTCCC Reverse
AAAAAACTGCAG-TCAGGACAGGAGCAGGATGGCGGC Pst I 153 Forward
AAAAAAGAATTC-ATGGCGTTTGCTTACGGTATGAC Eco RI Reverse
AAAAAACTGCAG-TCAGTCATGTTTTTCCGTTTCATT Pst I 153a Forward
AAAAAAGAATTC-CGGACTTCGGTATCGGTTCCCCAGCATTG Eco RI Reverse
AAAAAACTGCAG- Pst I TTACGCCGACGAAATACTCAGACTTTTCGG 154 Forward
CGCGGATCCCATATG-ACTGACAACAGCCC BamHI- NdeI Reverse
CCCGCTCGAG-TCGGCTTCCTTTCGGG XhoI 155 Forward
AAAAAAGAATTC-ATGAAAATCGGTATCCCACGCGAGTC Eco RI Reverse
AAAAAACTGCAG-TTACCCTTTCTTAAACATATTCAGCAT Pst I 156 Forward
AAAAAAGAATTC-GCACAGCAAAACGGTTTTGAAGC Eco RI Reverse
AAAAAACTGCAG-TCAAGCAGCCGCGACAAACAGCCC Pst I 157 Forward
CGCGGATCCCATATG-AGGAACGAGGAAAAAC BamHI- NdeI Reverse
CCCGCTCGAG-AAAACACAATATCCCCGC XhoI 158 Forward
AAAAAAGAATTC-GCGGAGCAGTTGGCGATGGCAAATTCTGC Eco RI Reverse
AAAAAATCTAGA-TTATCCACAGAGATTGTTTCCCAGTTC Xba I 160 Forward
CGCGGATCCCATATG-GACATTCTGGACAAAC BamHI- NdeI Reverse
CCCGCTCGAG-TTTTTGCCCGCCTTCTTT XhoI 163 Forward
AAAAAAGGTACC-ACCGTGCCGGATCAGGTGCAGATGTG Kpn I Reverse
AAAAAATCTAGA-TTACTCTGCCAATTCCACCTGCTCGTG Xba I 163a Forward
AAAAAAGAATTC-CGGCTGGTGCAGATAATGAGCCAGAC Eco RI Reverse
AAAAAATCTAGA-TTACTCTGCCAATTCCACCTGCTCGTG Xba I 164 Forward
CGCGGATCCCATATG-AACCGGACTTATGCC BamHI- NdeI Reverse
CCCGCTCGAG-TTTGTTTCCGTCAAACTGC XhoI 165 Forward
CGCGGATCCGCTAGC-GCTGAAGCGACAGACG BamHI- NheI Reverse
CCCGCTCGAG-AATATCCAATACTTTCGCG XhoI 206 Forward
CGCGGATCCCATATG-AAACACCGCCAACCGA BamHI- NdeI Reverse
CCCGCTCGAG-TTCTGTAAAAAAAGTATGTGC XhoI 209 Forward
CGCGGATCCCATATG-CTGCGGCATTTAGGA BamHI- NdeI Reverse
CCCGCTCGAG-TACCCCTGAAGGCAAC XhoI 211 Forward
AAAAAAGAATTC-ATGTTGCGGGTTGCTGCTGC Eco RI Reverse
AAAAAACTGCAG-CTATCCTGCGGATTGGCATTGAAA Pst I 212 Forward
CGCGGATCCCATATG-GACAATCTCGTATGG BamHI- NdeI Reverse
CCCGCTCGAG-AGGGGTTAGATCCTTCC XhoI 215 Forward
CGCGGATCCCATATG-GCATGGTTGGGTCGT BamHI- NdeI Reverse
CCCGCTCGAG-CATATCTTTTGTATCATAAATC XhoI 216 Forward
CGCGGATCCCATATG-GCAATGGCAGAAAACG BamHI- NdeI Reverse
CCCGCTCGAG-TACAATCCGTGCCGCC XhoI 217 Forward
CGCGGATCCCATATG-GCGGATGACGGTGTG BamHI- NdeI Reverse
CCCGCTCGAG-ACCCCGAATATCGAATCC XhoI 218 Forward
CGCGGATCCCATATG-GTCGCGGTCGATC BamHI- NdeI Reverse
CCCGCTCGAG-TAACTCATAGAATCCTGC XhoI 219 Forward
CGCGGATCCGCTAGC-ACGGCAAGGTTAAG BamHI- NheI Reverse
CCCGCTCGAG-TTTAAACCATCTCCTCAAAAC XhoI 223 Forward
CGCGGATCCCATATG-GAATTCAGGCACCAAGTA BamHI- NdeI Reverse
CCCGCTCGAG-GGCTTCCCGCGTGTC XhoI 225 Forward
CGCGGATCCCATATG-GACGAGTTGACCAACC BamHI- NdeI Reverse
CCCGCTCGAG-GTTCAGAAAGCGGGAC XhoI 226 Forward
AAAGAATTC-CTTGCGATTATCGTGCGCACGCG Eco RI Reverse
AAACTGCAG-TCAAAATCCCAAAACGGGGAT Pst I 228 Forward
CGCGGATCCCATATG-TCGCAAGAAGCCAAACAG BamHI- NdeI Reverse
CCCGCTCGAG-TTTGGCGGCATCTTTCAT XhoI 229 Forward
CGCGGATCCCATATG-CAAGAGGTTTTGCCC BamHI- NdeI Reverse
CCCGCTCGAG-ACACAATATAGCGGATGAAC XhoI 230 Forward
CGCGGATCCCATATG-CATCCGGGTGCCGAC BamHI- NdeI Reverse
CCCGCTCGAG-AAGTTTGGCGGCTTCGG XhoI 232 Forward
AAAAAAGAATTC-ATGTACGCTAAAAAAGGCGGTTTGGG Eco RI Reverse
AAAAAACTGCAG-TCAAGGTTTTTTCCTGATTGCCGCCGC Pst I 232a Forward
AAAAAAGAATTC-GCCAAGGCTGCCGATACACAAATTGA Eco RI Reverse
AAAAAACTGCAG-TTAAACATTGTCGTTGCCGCCCAGATG Pst I 233 Forward
CGCGGATCCCATATG-GCGGACAAACCCAAG BamHI- NdeI Reverse
CCCGCTCGAG-GACGGCATTGAGCAG XhoI 234 Forward
CGCGGATCCCATATG-GCCGTTTCACTGACCG BamHI- NdeI Reverse
GCCCAAGCTT-ACGGTTGGATTGCCATG Hind III 235 Forward
CGCGGATCCCATATG-GCCTGCCAAGTTCAAA BamHI- NdeI Reverse
CCCGCTCGAG-TTTGGGCTGCTCTTC XhoI 236 Forward
CGCGGATCCCATATG-GCGCGTTTCGCCTT BamHI- NdeI Reverse
CCCGCTCGAG-ATGGGTCGCGCGCCGT XhoI 238 Forward
CGCGGATCCGCTAGC-AACGGTTTGGATGCCCG BamHI- NheI Reverse
CCCGCTCGAG-TTTGTCTAAGTTCCTGATATG XhoI 239 Forward
CCGGAATTCTACATATG-CTCCACCATAAAGGTATTG EcoRI- NdeI Reverse
CCCGCTCGAG-TGGTGAAGAGCGGTTTAG XhoI 240 Forward
CGCGGATCCCATATG-GACGTTGGACGATTTC BamHI- NdeI Reverse
CCCGCTCGAG-AAACGCCATTACCCGATG XhoI 241 Forward
CCGGAATTCTACATATG-CCAACACGTCCAACT EcoRI- NdeI Reverse
CCCGCTCGAG-GAATGCGCCTGTAATTAATC XhoI 242 Forward
CGCGGATCCCATATG-ATCGGCAAACTTGTTG BamHI- NdeI Reverse
GCCCAAGCTT-ACCGATACGGTCGCAG HindIII 243 Forward
CGCGGATCCCATATG-ACGATTTTTTCGATGCTGC BamHI- NdeI Reverse
CCCGCTCGAG-CGACTTGGTTACCGCG XhoI 244 Forward
CGCGGATCCCATATG-CCGTCTGAAGCCC BamHI- NdeI Reverse
CCCGCTCGAG-TTTTTTCGGTAGGGGATTT XhoI 246 Forward
CGCGGATCCCATATG-GACATCGGCAGTGC BamHI- NdeI Reverse
CCCGCTCGAG-CCCGCGCTGCTGGAG XhoI 247 Forward
CGCGGATCCCATATG-GTCGGATCGAGTTAC BamHI- NdeI Reverse
CCCGCTCGAG-AAGTGTTCTGTTTGCGCA XhoI 248 Forward
CGCGGATCCCATATG-CGCAAACAGAACACT BamHI- NdeI Reverse
CCCGCTCGAG-CTCATCATTATTGCTAACA XhoI 249 Forward
CGCGGATCCCATATG-AAGAATAATGATTGCTTC BamHI- NdeI Reverse
CCCGCTCGAG-TTCCCGACCTCCGAC XhoI 251 Forward
CGCGGATCCCATATG-CGTGCTGCGGTAGT BamHI-
NdeI Reverse CCCGCTCGAG-TACGAAAGCCGGTCGTG XhoI 253 Forward
AAAAAAGAATTC-ATGATTGACAGGAACCGTATGCTGCG Eco RI Reverse
AAAAAACTGCAG-TTATTGGTCTTTCAAACGCCCTTCCTG Pst I 253a Forward
AAAAAAGAATTC-AAAATCCTTTTGAAAACAAGCGAAAACGG Eco RI Reverse
AAAAAACTGCAG-TTATTGGTCTTTCAAACGCCCTTCCTG Pst I 254 Forward
AAAAAAGAATTC-ATGTATACAGGCGAACGCTTCAATAC Eco RI Reverse
AAAAAATCTAGA-TCAGATTACGTAACCGTACACGCTGAC Xba I 255 Forward
CGCGGATCCCATATG-GCCGCGTTGCGTTAC BamHI- NdeI Reverse
CCCGCTCGAG-ATCCGCAATACCGACCAG XhoI 256 Forward
CGCGGATCCGCTAGC-TTTTAACACCGCCGGAC BamHI- NheI Reverse
CCCGCTCGAG-ACGCCTGTTTGTGCGG XhoI 257 Forward
CGCGGATCCCATATG-GCGGTTTCTTTCCTG BamHI- NdeI Reverse
CCCGCTCGAG-GCGCGTGAATATCGCG XhoI 258 Forward
AAAAAAGAATTC-GATTATTTCTGGTGGATTGTTGCGTTCAG Eco RI Reverse
AAAAAACTGCAG-CTACGCATAAGTTTTTACCGTTTTTGG Pst I 258a Forward
AAAAAAGAATTC-GCGAAGGCGGTGGCGCAAGGCGA Eco RI Reverse
AAAAAACTGCAG-CTACGCATAAGTTTTTACCGTTTTTGG Pst I 259 Forward
CGCGGATCCCATATG-GAAGAGCTGCCTCCG BamHI- NdeI Reverse
CCCGCTCGAG-GGCTTTTCCGGCGTTT XhoI 260 Forward
CGCGGATCCCATATG-GGTGCGGGTATGGT BamHI- NdeI Reverse
CCCGCTCGAG-AACAGGGCGACACCCT XhoI 261 Forward
AAAAAAGAATTC-CAAGATACAGCTCGGGCATTCGC Eco RI Reverse
AAAAAACTGCAG-TCAAACCAACAAGCCTTGGTCACT Pst I 263 Forward
CGCGGATCCCATATG-GCACGTTTAACCGTA BamHI- NdeI Reverse
CCCGCTCGAG-GGCGTAAGCCTGCAATT XhoI 264 Forward
AAAAAAGGTACC-GCCGACGCAGTGGTCAAGGCAGAA Kpn I Reverse
AAACTGCAG-TCAGCCGGCGGTCAATACCGCCCG Pst I 265 Forward
AAAAAAGAATTC-GCGGAGGTCAAGAGAAGGTGTTTG Eco RI Reverse
AAAAAACTGCAG-TTACGAATACGTCGTCAAAATGGG Pst I 266 Forward
AAAGAATTC-CTCATCTTTGCCAACGCCCCCTTC Eco RI Reverse
AAACTGCAG-CTATTCCCTGTTGCGCGTGTGCCA Pst I 267 Forward
AAAGAATTC-TTCTTCCGATTCGATGTTAATCG Eco RI Reverse
AAACTGCAG-TTAGTAAAAACCTTTCTGCTTGGC Pst I 269 Forward
AAAGAATTC-TGCAAACCTTGCGCCACGTGCCC Eco RI Reverse
AAACTGCAG-TTACGAAGACCGCAACGAAAGGCAGAG Pst I 269a Forward
AAAAAAGAATTC-GACTTTATCCAAAACACGGCTTCGCC Eco RI Reverse
AAACTGCAG-TTACGAAGACCGCAACGAAAGGCAGAG Pst I 270 Forward
AAAGAATTC-GCCGTCAAGCTCGTTTTGTTGCAATG Eco RI Reverse
AAACTGCAG-TTATTCGGCGGTAAATGCCGTCTG Pst I 271 Forward
CGCGGATCCCATATG-CCTGTGTGCAGCTCGAC BamHI- NdeI Reverse
CCCGCTCGAG-TCCCAGCCCCGTGGAG XhoI 272 Forward
AAAGAATTC-ATGACCGCAAAGGAAGAACTGTTCGC Eco RI Reverse
AAACTGCAG-TCAGAGCAGTTCCAAATCGGGGCT Pst I 273 Forward
AAAGAATTC-ATGAGTCTTCAGGCGGTATTTATATACCC Eco RI Reverse
AAACTGCAG-TTACGCGTAAGAAAAAACTGC Pst I 274 Forward
CGCGGATCCCATATG-ACAGATTTGGTTACGGAC BamHI- NdeI Reverse
CCCGCTCGAG-TTTGCTTTCAGTATTATTGAA XhoI 276 Forward AAAAAAGAATTC- Eco
RI ATGATTTTGCCGTCGTCCATCACGATGATGCG Reverse
AAAAAACTGCAG-CTACACCACCATCGGCGAATTTATGGC Pst I 277 Forward
AAAAAAGAATTC-ATGCCCCGCTTTGAGGACAAGCTCGTAGG Eco RI Reverse
AAAAAACTGCAG-TCATAAGCCATGCTTACCTTCCAACAA Pst I 277a Forward
AAAAAAGAATTC-GGGGCGGCGGCTGGGTTGGACGTAGG Eco RI Reverse
AAAAAACTGCAG-TCATAAGCCATGCTTACCTTCCAACAA Pst I 278 Forward
AAAAAAGGTACC-GTCAAAGTTGTATTAATCGGGCCTTTGCC Kpn I Reverse
AAAAAACTGCAG-TCATTCAACCATATCAAATCTGCC Pst I 278a Forward
AAAAAAGAATTC-AAAACTCTCCTAATTCGTCATAGTCG Eco RI Reverse
AAAAAACTGCAG-TCATTCAACCATATCAAATCTGCC Pst I 279 Forward
CGCGGATCCCATATG-TTGCCTGCAATCACGATT BamHI- NdeI Reverse
CCCGCTCGAG-TTTAGAAGCGGGCGGCAA XhoI 280 Forward
AAAAAAGGTACC-GCCCCCCTGCCGGTTGTAACCAG Kpn I Reverse
AAAAAACTGCAG-TTATTGCTTCATCGCGTTGGTCAAGGC Pst I 281 Forward
AAAAAAGAATTC-GCACCCGTCGGCGTATTCCTCGTCATGCG Eco RI Reverse
AAAAAATCTAGA-GGTCAGAATGCCGCCTTCTTTGCCGAG Xba I 281a Forward
AAAAAAGAATTC-TCCTACCACATCGAAATTCCTTCCGG Eco RI Reverse
AAAAAATCTAGA-GGTCAGAATGCCGCCTTCTTTGCCGAG Xba I 282 Forward
AAAAAAGAATTC-CTTTACCTTGACCTGACCAACGGGCACAG Eco RI Reverse
AAAAAACTGCAG-TCAACCTGCCAGTTGCGGGAATATCGT Pst I 283 Forward
CGCGGATCCCATATG-GCCGTCTTTACTTGGAAG BamHI- NdeI Reverse
CCCGCTCGAG-ACGGCAGTATTTGTTTACG XhoI 284 Forward
CGCGGATCCCATATG-TTTGCCTGCAAAAGAATCG BamHI- NdeI Reverse
CCCGCTCGAG-CCGACTTTGCAAAAACTG XhoI 286 Forward
CGCGGATCCCATATG-GCCGACCTTTCCGAAAA BamHI- NdeI Reverse
CCCGCTCGAG-GAAGCGCGTTCCCAAG XhoI 287 Forward
CCGGAATTCTAGCTAGC-CTTTCAGCCTGCGGG EcoRI- NheI Reverse
CCCGCTCGAG-ATCCTGCTCTTTTTTGCC XhoI 288 Forward
CGCGGATCCCATATG-CACACCGGACAGG BamHI- NdeI Reverse
CCCGCTCGAG-CGTATCAAAGACTTGCGT XhoI 290 Forward
CGCGGATCCCATATG-GCGGTTTGGGGCGGA BamHI- NdeI Reverse
CCCGCTCGAG-TCGGCGCGGCGGGC XhoI 292 Forward
CGCGGATCCCATATG-TGCGGGCAAACGCCC BamHI- NdeI Reverse
CCCGCTCGAG-TTGATTTTTGCGGATGATTT XhoI 294 Forward
AAAAAAGAATTC-GTCTGGTCGATTCGGGTTGTCAGAAC Eco RI Reverse
AAAAAACTGCAG-TTACCAGCTGATATAAAACATCGCTTT Pst I 295 Forward
CGCGGATCCCATATG-AACCGGCCGGCCTCC BamHI- NdeI Reverse
CCCGCTCGAG-CGATATTTGATTCCGTTGC XhoI 297 Forward
AAAAAAGAATTC-GCATACATTGCTTCGACAGAGAG Eco RI Reverse
AAAAAACTGCAG-TCAATCCGATTGCGACACGGT Pst I 298 Forward
AAAAAAGAATTC-CTGATTGCCGTGTGGTTCAGCCAAAACCC Eco RI Reverse
AAAAAACTGCAG-TCATGGCTGTGTACTTGATGGTTGCGT Pst I 299 Forward
CGCGGATCCGCTAGC-CTACCTGTCGCCTCCG BamHI- NheI Reverse
CCCGCTCGAG-TTGCCTGATTGCAGCGG XhoI 302 Forward
AAAAAAGAATTC-ATGAGTCAAACCGATACGCAACG Eco RI Reverse
AAAAAACTGCAG-TTAAGGTGCGGGATAGAATGTGGGCGC Pst I 305 Forward
AAAAAAGGTACC-GAATTTTTACCGATTTCCAGCACCGGA Kpn I Reverse
AAAAAACTGCAG-TCATTCCCAACTTATCCAGCCTGACAG Pst I 305a Forward
AAAAAAGGTACC-TCCCGTTCGGGCAGTACGATTATGGG Kpn I Reverse
AAAAAACTGCAG-TTACAAACCGACATCATGCAGGGTGAA Pst I 306 Forward
CGCGGATCCCATATG-TTTATGAACAAATTTTCCC BamHI- NdeI Reverse
CCCGCTCGAG-CCGCATCGGCAGAC XhoI 308 Forward
CGCGGATCCCATATG-TTAAATCGGGTATTTTATC BamHI- NdeI Reverse
CCCGCTCGAG-ATCCGCCATTCCCTGC XhoI 311 Forward
AAAAAAGGTACC-ATGTTCAGTTTTGGCTGGGTGTTT Kpn I Reverse
AAACTGCAG-ATGTTCATATTCCCTGCCTTCGGC Pst I 312 Forward
AAAAAAGGTACC-ATGAGTATCCCATCCGGCGAAATT Kpn I Reverse
AAACTGCAG-TCAGTTTTTCATCGATTGAACCGG Pst I 313 Forward
AAAAAAGAATTC-ATGGACGACCCGCGCACCTACGGATC Eco RI Reverse
AAAAAACTGCAG-TCAGCGGCTGCCGCCGATTTTGCT Pst I 401 Forward
CGCGGATCCCATATG-AAGGCGGCAACACAGC BamHI- NdeI Reverse
CCCGCTCGAG-CCTTACGTTTTTCAAAGCC XhoI 402 Forward
AAAAAAGAATTC-GTGCCTCAGGCATTTTCATTTACCCTTGC Eco RI Reverse
AAAAAATCTAGA-TTAAATCCCTCTGCCGTATTTGTATTC Xba I 402a Forward
AAAAAAGAATTC-AGGCTGATTGAAAACAAACACGG Eco RI Reverse
AAAAAATCTAGA-TTAAATCCCTCTGCCGTATTTGTATTC Xba I 406 Forward
CGCGGATCCCATATG-TGCGGGACACTGACAG BamHI- NdeI Reverse
CCCGCTCGAG-AGGTTGTCCTTGTCTATG XhoI 501 Forward
CGCGGATCCCATATG-GCAGGCGGAGATGGC BamHI- NdeI Reverse
CCCGCTCGAG-GGTGTGATGTTCACCC XhoI 502 Forward
CGCGGATCCCATATG-GTAGACGCGCTTAAGCA BamHI- NdeI Reverse
CCCGCTCGAG-AGCTGCATGGCGGCG XhoI 503 Forward
CGCGGATCCCATATG-TGTTCGGGGAAAGGCG BamHI- NdeI Reverse
CCCGCTCGAG-CCGCGCATTCCTCGCA XhoI 504 Forward
CGCGGATCCCATATG-AGCGATATTGAAGTGACG BamHI- NdeI Reverse
GCCCAAGCTT-TGATTCAAGTCCTTGCCG HindIII 505 Forward
CGCGGATCCCATATG-TTTCGTTTACAATTCAGG BamHI- NdeI Reverse
CCCGCTCGAG-CGGCGTTTTATAGCGG XhoI 510 Forward
CGCGGATCCCATATG-CCTTCGCGGACAC BamHI- NdeI Reverse
CCCGCTCGAG-GCGCACTGGCAGCG XhoI 512 Forward
CGCGGATCCCATATG-GGACATGAAGTAACGGT BamHI- NdeI Reverse
CCCGCTCGAG-AGGAATAGCCTTTGACG XhoI 515 Forward
CGCGGATCCCATATG-GAGGAAATAGCCTTCGA BamHI- NdeI Reverse
CCCGCTCGAG-AAATGCCGCAAAGCATC XhoI 516 Forward
CGCGGATCCCATATG-TGTACGTTGATGTTGTGG BamHI- NdeI Reverse
CCCGCTCGAG-TTTGCGGGCGGCATC XhoI 517 Forward
CGCGGATCCCATATG-GGTAAAGGTGTGGAAATA BamHI- NdeI Reverse
CCCGCTCGAG-GTGCGCCCAGCCGT XhoI 518 Forward
AAAGAATTC-GCTTTTTTACTGCTCCGACCGGAAGG Eco RI Reverse
AAACTGCAG-TCAAATTTCAGACTCTGCCAC Pst I 519 Forward
CGCGGATCCCATATG-TTCAAATCCTTTGTCGTCA BamHI- NdeI Reverse
CCCGCTCGAG-TTTGGCGGTTTTGCTGC XhoI 520 Forward
CGCGGATCCCATATG-CCTGCGCTTCTTTCA BamHI- NdeI Reverse
CCCGCTCGAG-ATATTTACATTTCAGTCGGC XhoI 521 Forward
CGCGGATCCCATATG-GCCAAAATCTATACCTGC BamHI- NdeI Reverse
CCCGCTCGAG-CATACGCCCCAGTTCC XhoI
522 Forward CGCGGATCCCATATG-ACTGAGCCGAAACAC BamHI- NdeI Reverse
GCCCAAGCTT-TTCTGATTTCAAATCGGCA HindIII 523 Forward
CGCGGATCCCATATG-GCTCTGCTTTCCGCG BamHI- NdeI Reverse
CCCGCTCGAG-AGGGTGTGTGATAATAAGAAG XhoI 525 Forward
CGCGGATCCCATATG-GCCGAAATGGTTCAAATC BamHI- NdeI Reverse
CCCGCTCGAG-GCCCGTGCATATCATAAA XhoI 527 Forward
AAAGAATTC-TTCCCTCAATGTTGCCGTTTTCG Eco RI Reverse
AAACTGCAG-TTATGCTAAACTCGAAACAAATTC Pst I 529 Forward
CGCGGATCCGCTAGC-TGCTCCGGCAGCAAAAC BamHI- NheI Reverse
GCCCAAGCTT-ACGCAGTTCGGAATGGAG HindIII 530 Forward
CGCGGATCCCATATG-AGTGCGAGCGCGG BamHI- NdeI Reverse
CCCGCTCGAG-ACGACCGACTGATTCCG XhoI 531 Forward
AAAAAAGAATTC-TATGCCGCCGCCTACCAAATCTACGG Eco RI Reverse
AAAAAACTGCAG-TTAAAACAGCGCCGTGCCGACGACAAG Pst I 532 Forward
AAAAAAGAATTC-ATGAGCGGTCAGTTGGGCAAAGGTGC Eco RI Reverse
AAAAAACTGCAG-TCAGTGTTCCAAGTGGTCGGTATCAAA Pst I 532a Forward
AAAAAAGAATTC-TTGGGTGTCGCGTTTGAGCCGGAAGT Eco RI Reverse
AAAAAACTGCAG-TCAGTGTTCCAAGTGGTCGGTATCAAA Pst I 535 Forward
AAAGAATTC-ATGCCCTTTCCCGTTTTCAGAC Eco RI Reverse
AAACTGCAG-TCAGACGACCCCGCCTTCCCC Pst I 537 Forward
CGCGGATCCCATATG-CATACCCAAAACCAATCC BamHI- NdeI Reverse
CCCGCTCGAG-ATCCTGCAAATAAAGGGTT XhoI 538 Forward
CGCGGATCCCATATG-GTCGAGCTGGTCAAAGC BamHI- NdeI Reverse
CCCGCTCGAG-TGGCATTTCGGTTTCGTC XhoI 539 Forward
CGCGGATCCGCTAGC-GAGGATTTGCAGGAAA BamHI- NheI Reverse
CCCGCTCGAG-TACCAATGTCGGCAAATC XhoI 542 Forward
AAAGAATTC-ATGCCGTCTGAAACCGTGTC Eco RI Reverse
AAACTGCAG-TTACCGCGAACCGGTCAGGAT Pst I 543 Forward
AAAAAAGAATTC-GCCTTCGATGGCGACGTTGTAGGTAC Eco RI Reverse
AAAAAATCTAGA- Xba I TTAATGAAGAAGAACATATTGGAATTTTGG 543a Forward
AAAAAAGAATTC-GGCAAAACTCGTCATGAATTTGC Eco RI Reverse AAAAAATCTAGA-
Xba I TTAATGAAGAAGAACATATTGGAATTTTGG 544 Forward
AAAGAATTC-GCGCCCGCCTTCTCCCTGCCCGACCTGCACGG Eco RI Reverse
AAACTGCAG-CTATTGCGCCACGCGCGTATCGAT Pst I 544a Forward AAAAAAGAATTC-
Eco RI GCAAATGACTATAAAAACAAAAACTTCCAAGTACTTGC Reverse
AAACTGCAG-CTATTGCGCCACGCGCGTATCGAT Pst I 547 Forward
AAAGAATTC-ATGTTCGTAGATAACGGATTTAATAAAAC Eco RI Reverse
AAACTGCAG-TTAACAACAAAAAACAAACCGCTT Pst I 548 Forward
AAAGAATTC-GCCTGCAAACCTCAAGACAACAGTGCGGC Eco RI Reverse
AAACTGCAG-TCAGAGCAGGGTCCTTACATCGGC Pst I 550 Forward AAAAAAGTCGAC-
Sal I ATGATAACGGACAGGTTTCATCTCTTTCATTTTCC Reverse
AAACTGCAG-TTACGCAAACGCTGCAAAATCCCC Pst I 550a Forward
AAAAAAGAATTC-GTAAATCACGCCTTTGGAGTCGCAAACGG Eco RI Reverse
AAACTGCAG-TTACGCAAACGCTGCAAAATCCCC Pst I 552 Forward
AAAAAAGAATTC-TTGGCGCGTTGGCTGGATAC Eco RI Reverse
AAACTGCAG-TTATTTCTGATGCCTTTTCCCAAC Pst I 554 Forward
CGCGGATCCCATATG-TCGCCCGCGCCCAAC BamHI- NdeI Reverse
CCCGCTCGAG-CTGCCCTGTCAGACAC XhoI 556 Forward
AAAGAATTC-GCGGGCGGTTTTGTTTGGACATCCCG Eco RI Reverse
AAACTGCAG-TTAACGGTGCGGACGTTTCTGACC Pst I 557 Forward
CGCGGATCCCATATG-TGCGGTTTCCACCTGAA BamHI- NdeI Reverse
CCCGCTCGAG-TTCCGCCTTCAGAAAGG XhoI 558 Forward
AAAGAATTC-GAGCTTTATATGTTTCAACAGGGGACGGC Eco RI Reverse
AAACTGCAG-CTAAACAATGCCGTCTGAAAGTGGAGA Pst I 558a Forward
AAAAAAGAATTC-ATTAGATTCTATCGCCATAAACAGACGGG Eco RI Reverse
AAAAAACTGCAG-CTAAACAATGCCGTCTGAAAGTGGAGA Pst I 560 Forward
AAAAAAGAATTC- Eco RI TCGCCTTTCCGGGACGGGGCGCACAAGATGGC Reverse
AAAAAACTGCAG-TCATGCGGTTTCAGACGGCATTTTGGC Pst I 561 Forward
CCGGAATTCTACATATG-ATACTGCCAGCCCGT EcoRI- NdeI Reverse
CCCGCTCGAG-TTTCAAGCTTTCTTCAGATG XhoI 562 Forward
CGCGGATCCCATATG-GCAAGCCCGTCGAG BamHI- NdeI Reverse
CCCGCTCGAG-AGACCAACTCCAACTCGT XhoI 565 Forward
CGCGGATCCCATATG-AAGTCGAGCGCGAAATAC BamHI- NdeI Reverse
CCCGCTCGAG-GGCATTGATCGGCGGC XhoI 566 Forward
CGCGGATCCCATATG-GTCGGTGGCGAAGAGG BamHI- NdeI Reverse
CCCGCTCGAG-CGCATGGGCGAAGTCA XhoI 567 Forward
CCGGAATTCTACATATG-AGTGCGAACATCCTTG EcoRI- NdeI Reverse
CCCGCTCGAG-TTTCCCCGACACCCTCG XhoI 568 Forward
CGCGGATCCCATATG-CTCAGGGTCAGACC BamHI- NdeI Reverse
CCCGCTCGAG-CGGCGCGGCGTTCAG XhoI 569 Forward
AAAAAAGAATTC-CTGATTGCCTTGTGGGAATATGCCCG Eco RI Reverse
AAAAAACTGCAG-TTATGCATAGACGCTGATAACGGCAAT Pst I 570 Forward
CGCGGATCCCATATG-GACACCTTCCAAAAAATCG BamHI- NdeI Reverse
CCCGCTCGAG-GCGGGCGTTCATTTCTTT XhoI 571 Forward AAAAAAGAATTC- Eco RI
ATGGGTATTGCCGGCGCCGTAAATGTTTTGAACCC Reverse
AAAAAACTGCAG-TTATGGCCGACGCGCGGCTACCTGACG Pst I 572 Forward
CGCGGATCCCATATG-GCGCAAAAAGGCAAAACC BamHI- NdeI Reverse
CCCGCTCGAG-GCGCAGTGTGCCGATA XhoI 573 Forward
CGCGGATCCCATATG-CCCTGTTTGTGCCG BamHI- NdeI Reverse
CCCGCTCGAG-GACGGTGTCATTTCGCC XhoI 574 Forward
CGCGGATCCCATATG-TGGTTTGCCGCCCGC BamHI- NdeI Reverse
CCCGCTCGAG-AACTTCGATTTTATTCGGG XhoI 575 Forward
CGCGGATCCCATATG-GTTTCGGGCGAGG BamHI- NdeI Reverse
CCCGCTCGAG-CATTCCGAATCTGAACAG XhoI 576 Forward
CGCGGATCCCATATG-GCCGCCCCCGCATCT BamHI- NdeI Reverse
CCCGCTCGAG-ATTTACTTTTTTGATGTCGAC XhoI 577 Forward
CGCGGATCCCATATG-GAAAGGAACGGTGTATTT BamHI- NdeI Reverse
CCCGCTCGAG-AGGCTGTTTGGTAGATTCG XhoI 578 Forward
CGCGGATCCCATATG-AGAAGGTTCGTACAG BamHI- NdeI Reverse
CCCGCTCGAG-GCCAACGCCTCCACG XhoI 579 Forward
CGCGGATCCCATATG-AGATTGGGCGTTTCCAC BamHI- NdeI Reverse
CCCGCTCGAG-AGAATTGATGATGTGTATGT XhoI 580 Forward
CGCGGATCCCATATG-AGGCAGACTTCGCCGA BamHI- NdeI Reverse
CCCGCTCGAG-CACTTCCCCCGAAGTG XhoI 581 Forward
CGCGGATCCCATATG-CACTTCGCCCAGC BamHI- NdeI Reverse
CCCGCTCGAG-CGCCGTTTGGCTTTGG XhoI 582 Forward
AAAAAAGAATTC-TTTGGAGAGACCGCGCTGCAATGCGC Eco RI Reverse
AAAAAATCTAGA-TCAGATGCCGTCCCAGTCGTTGAA Xba I 583 Forward
AAAAAAGAATTC-ACTGCCGGCAATCGACTGCATAATCG Eco RI Reverse
AAAAAACTGCAG-TTAACGGAGGTCAATATGATGAAATTG Pst I 584 Forward
AAAAAAGAATTC- Eco RI GCGGCTGAAGCATTGAATTACAATATTGTC Reverse
AAAAAACTGCAG-TCAGAACTGAACCGTCCCATTGACGCT Pst I 585 Forward
AAAAAAGGTACC-TCTTTCTGGCTGGTGCAGAACACCCTTGC Eco RI Reverse
AAAAAACTGCAG-TCAGTTCGCACTTTTTTCTGTTTTGGA Pst I 586 Forward
CGCGGATCCCATATG-GCAGCCCATCTCG BamHI- NdeI Reverse
CCCGCTCGAG-TTTCAGCGAATCAAGTTTC XhoI 587 Forward
CGCGGATCCCATATG-GACCTGCCCTTGACGA BamHI- NdeI Reverse
CCCGCTCGAG-AAATGTATGCTGTACGCC XhoI 588 Forward
AAAAAAGAATTC-GCCGTCCTGACTTCCTATCAAGAACCAGG Eco RI Reverse
AAAAAACTGCAG-TTATTTGTTTTTGGGCAGTTTCACTTC Pst I 589 Forward
AAAAAAGAATTC- Eco RI ATGCAACAAAAAATCCGTTTCCAAATCGAAGG Reverse
AAAAAACTGCAG-CTAATCGATTTTTACCCGTTTCAGGCG Pst I 590 Forward
AAAAAAGAATTC-ATGAAAAAACCTTTGATTTCAGTTGCGGC Eco RI Reverse
AAAAAACTGCAG-TTACTGCTGCGGCTCTGAAACCAT Pst I 591 Forward
AAAAAAGAATTC-CACTACATCGTTGCCAGATTGTGCGG Eco RI Reverse
AAAAAACTGCAG-CTAACCGAGCAGCCGGGTAACGTCGTT Pst I 592a Forward
AAAAAAGAATTC-CGCGATTACACCGCCAAGCTGAAAATGGG Eco RI Reverse
AAAAAACTGCAG-TTACCAAACGTCGGATTTGATACG Pst I 593 Forward
CGCGGATCCGCTAGC-CTTGAACTGAACGGACTC BamHI- NheI Reverse
CCCGCTCGAG-GCGGAAGCGGACGATT XhoI 594a Forward
AAAAAAGAATTC-GGTAAGTTCGCCGTTCAGGCCTTTCA Eco RI Reverse
AAAAAACTGCAG-TTACGCCGCCGTTTCCTGACACTCGCG Pst I 595 Forward
AAAAAAGAATTC-TGCCAGCCGCCGGAGGCGGAGAAAGC Eco RI Reverse
AAAAAACTGCAG-TTATTTCAAGCCGAGTATGCCGCG Pst I 596 Forward
CGCGGATCCCATATG-TCCCAACAATACGTC BamHI- NdeI Reverse
CCCGCTCGAG-ACGCGTTACCGGTTTGT XhoI 597 Forward
CGCGGATCCCATATG-CTGCTTCATGTCAGC BamHI- NdeI Reverse
GCCCAAGCTT-ACGTATCCAGCTCGAAG HindIII 601 Forward
CGCGGATCCCATATG-ATATGTTCCCAACCGGCAAT BamHI- NdeI Reverse
CCCGCTCGAG-AAAACAATCCTCAGGCAC XhoI 602 Forward
CGCGGATCCGCTAGC-TTGCTCCATCAATGC BamHI- NheI Reverse
CCCGCTCGAG-ATGCAGCTGCTAAAAGCG XhoI 603 Forward
AAAAAAGAATTC-CTGTCCTCGCGTAGGCGGGGACGGGG Eco RI Reverse
AAAAAACTGCAG-CTACAAGATGCCGGCAAGTTCGGC Pst I 604 Forward
CGCGGATCCGCTAGC-CCCGAAGCGCACTT BamHI- NheI Reverse
CCCGCTCGAG-GACGGCATCTGCACGG XhoI 606a Forward
AAAAAAGAATTC-CGCGAATACCGCGCCGATGCGGGCGC Eco RI Reverse
AAAAAACTGCAG-TTAAAGCGATTTGAGGCGGGCGATACG Pst I
607 Forward AAAAAAGAATTC-ATGCTGCTCGACCTCAACCGCTTTTC Eco RI Reverse
AAAAAACTGCAG-TCAGACGGCCTTATGCGATCTGAC Pst I 608 Forward
AAAAAAGAATTC-ATGTCCGCCCTCCTCCCCATCATCAACCG Eco RI Reverse
AAAAAACTGCAG-TTAGTCTATCCAAATGTCGCGTTC Pst I 609 Forward
CGCGGATCCCATATG-GTTGTGGATAGACTCG BamHI- NdeI Reverse
CCCGCTCGAG-CTGGATTATGATGTCTGTC XhoI 610 Forward
CGCGGATCCCATATG-ATTGGAGGGCTTATGCA BamHI- NdeI Reverse
CCCGCTCGAG-ACGCTTCAACATCTTTGCC XhoI 611 Forward
CGCGGATCCCATATG-CCGTCTCAAAACGGG BamHI- NdeI Reverse
CCCGCTCGAG-AACGACTTTGAACGCGCAA XhoI 613 Forward
CGCGGATCCCATATG-TCGCGTTCGAGCCG3 BamHI- NdeI Reverse
CCCGCTCGAG-AGCCTGTAAAATAAGCGGC XhoI 614 Forward
CGCGGATCCCATATG-TCCGTCGTGAGCGGC BamHI- NdeI Reverse
CCCGCTCGAG-CCATACTGCGGCGTTC XhoI 616 Forward
AAAAAAGAATTC-ATGTCAAACACAATCAAAATGGTTGTCGG Eco RI Reverse
AAAAAATCTAGA-TTAGTCCGGGCGGCAGGCAGCTCG Xba I 619a Forward
AAAAAAGAATTC-GGGCTTCTCGCCGCCTCGCTTGC Eco RI Reverse
AAAAAACTGCAG-TCATTTTTTGTGTTTTAAAACGAGATA Pst I 622 Forward
CGCGGATCCCATATG-GCCGCCCTGCCTAAAG BamHI- NdeI Reverse
CCCGCTCGAG-TTTGTCCAAATGATAAATCTG XhoI 624 Forward
CGCGGATCCCATATG-TCCCCGCGCTTTTACCG BamHI- NdeI Reverse
CCCGCTCGAG-AGATTCGGGCCTGCGC XhoI 625 Forward
CGCGGATCCCATATG-TTTGCAACCAGGAAAATG BamHI- NdeI Reverse
CCCGCTCGAG-CGGCAAAATTACCGCCTT XhoI 627a Forward
AAAAAAGAATTC-AAAGCAGGCGAGGCAGGCGCGCTGGG Eco RI Reverse
AAAAAACTGCAG- Pst I TTACGAATGAAACAGGGTACCCGTCATCAAGGC 628 Forward
AAAAAAGGTACC-GCCTTACAAACATGGATTTTGCGTTC Kpn I Reverse
AAAAAACTGCAG-CTACGCACCTGAAGCGCTGGCAAA Pst I 629a Forward
AAAAAAGAATTC-GCCACCTTTATCGCGTATGAAAACGA Eco RI Reverse
AAAAAACTGCAG-TTACAACACCGCCGTCCGGTTCAAACC Pst I 630a Forward
AAAAAAGAATTC-GCGGCTTTGGGTATTTCTTTCGG Eco RI Reverse
AAAAAACTGCAG-TTAGGAGACTTCGCCAATGGAGCCGGG Pst I 635 Forward
AAAAAAGAATTC- Eco RI ATGACCCAGCGACGGGTCGGCAAGCAAAACCG Reverse
AAAAAACTGCAG-TTAATCCACTATAATCCTGTTGCT Pst I 638 Forward
AAAAAAGAATTC-ATGATTGGCGAAAAGTTTATCGTAGTTGG Eco RI Reverse
AAAAAACTGCAG-TCACGAACCGATTATGCTGATCGG Pst I 639 Forward
CGCGGATCCCATATG-ATGCTTTATTTTGTTCG BamHI- NdeI Reverse
CCCGCTCGAG-ATCGCGGCTGCCGAC XhoI 642 Forward
CGCGGATCCCATATG-CGGTATCCGCCGCAAT BamHI- NdeI Reverse
CCCGCTCGAG-AGGATTGCGGGGCATTA XhoI 643 Forward
CGCGGATCCCATATG-GCTTCGCCGTCGGCAG BamHI- NdeI Reverse
CCCGCTCGAG-AACCGAAAAACAGACCGC XhoI 644 Forward AAAAAAGAATTC- Eco RI
ATGCCGTCTGAAAGGTCGGCGGATTGTTGCCC Reverse
AAAAAATCTAGA-CTACCCGCAATATCGGCAGTCCAATAT Pst I 645 Forward
AAAAAAGAATTC-GTGGAACAGAGCAACACGTTAAATCG Eco RI Reverse
AAAAAACTGCAG-CTACGAGGAAACCGAAGACCAGGCCGC Pst I 647 Forward
AAAAAAGAATTC-ATGCAAAGGCTCGCCGCAGACGG Eco RI Reverse
AAAAAACTGCAG-TTAGATTATCAGGGATATCCGGTAGAA Pst I 648 Forward
AAAAAAGAATTC- Eco RI ATGAACAGGCGCGACGCGCGGATCGAACG Reverse
AAAAAACTGCAG-TCAAGCTGTGTGCTGATTGAATGCGAC Pst I 649 Forward
AAAAAAGAATTC-GGTACGTCAGAACCCGCCCACCG Eco RI Reverse
AAAAAACTGCAG-TTAACGGCGGAAACTGCCGCCGTC Pst I 650 Forward
AAAAAAGAATTC-ATGTCCAAACTCAAAACCATCGC Eco RI Reverse
AAAAAACTGCAG-TCAGACGGCATGGCGGTCTGTTTT Pst I 652 Forward
AAAAAAGGTACC- Kpn I GCTGCCGAAGACTCAGGCCTGCCGCTTTACCG Reverse
AAAAAACTGCAG-TTATTTGCCCAGTTGGTAGAATGCGGC Pst I 653 Forward
AAAAAAGAATTC-GCGGCTTTGCCGGTAATTTTCATCGG Eco RI Reverse
AAAAAACTGCAG-CTATGCCGGTCTGGTTGCCGGCGGCGA Pst I 656a Forward
AAAAAAGAATTC-CGGCCGACGTCGTTGCGTCCTAAGTC Eco RI Reverse
AAAAAACTGCAG-CTACGATTTCGGCGATTTCCACATCGT Pst I 657 Forward
AAAAAAGAATTC-GCAGAATTTGCCGACCGCCATTTGTGCGC Eco RI Reverse
AAAAAACTGCAG-TTATAGGGACTGATGCAGTTTTTTTGC Pst I 658 Forward
CGCGGATCCCATATG-GTGTCCGGAATTGTG BamHI- NdeI Reverse
CCCGCTCGAG-GGCAGAATGTTTACCGTT XhoI 661 Forward AAAAAAGAATTC- Eco RI
ATGCACATCGGCGGCTATTTTATCGACAACCC Reverse
AAAAAACTGCAG-TCACGACGTGTCTGTTCGCCGTCGGGC Pst I 663 Forward
CGCGGATCCCATATG-TGTATCGAGATGAAATT BamHI- NdeI Reverse
CCCGCTCGAG-GTAAAAATCGGGGCTGC XhoI 664 Forward
CGCGGATCCCATATG-GCGGCTGGCGCGGT BamHI- NdeI Reverse
CCCGCTCGAG-AAATCGAGTTTTACACCAC XhoI 665 Forward
AAAAAAGAATTC-ATGAAATGGGACGAAACGCGCTTCGG Eco RI Reverse
AAAAAACTGCAG-TCAATCCAAAATTTTGCCGACGATTTC Pst I 666 Forward
AAAAAAGAATTC-AACTCAGGCGAAGGAGTGCTTGTGGC Eco RI Reverse
AAAAAATCTAGA-TCAGTTTAGGGATAGCAGGCGTAC Xba I 667 Forward
AAAAAAGAATTC- Eco RI CCGCATCCGTTTGATTTCCATTTCGTATTCGTCCG Reverse
AAAAAACTGCAG-TTAATGACACAATAGGCGCAAGTC Pst I 669 Forward
AAAAAAGAATTC-ATGCGCCGCATCATTAAAAAACACCAGCC Eco RI Reverse
AAAAAACTGCAG-TTACAGTATCCGTTTGATGTCGGC Pst I 670a Forward
AAAAAAGAATTC-AAAAACGCTTCGGGCGTTTCGTCTTC Eco RI Reverse
AAAAAACTGCAG- Pst I TTAGGAGCTTTTGGAACGCGTCGGACTGGC 671 Forward
CGCGGATCCCATATG-ACCAGCAGGGTAAC BamHI- NdeI Reverse
CCCGCTCGAG-AGCAACTATAAAAACGCAAG XhoI 672 Forward
CGCGGATCCCATATG-AGGAAAATCCGCACC BamHI- NdeI Reverse
CCCGCTCGAG-ACGGGATAGGCGGTTG XhoI 673 Forward
AAAAAAGAATTC-ATGGATATTGAAACCTTCCTTGCAGG Eco RI Reverse
AAAAAACTGCAG-CTACAAACCCAGCTCGCGCAGGAA Pst I 674 Forward
AAAAAAGAATTC-ATGAAAACAGCCCGCCGCCGTTCCCG Eco RI Reverse
AAAAAACTGCAG-TCAACGGCGTTTGGGCTCGTCGGG Pst I 675 Forward
CGCGGATCCCATATG-AACACCATCGCCCC BamHI- NdeI Reverse
CCCGCTCGAG-TTCTTCGTCTTCAAACTGT XhoI 677a Forward
AAAAAAGAATTC-AGACGGCATTCCCGATCAGTCGATTTTGA Eco RI Reverse
AAAAAACTGCAG-TTACGTATGCGCGAAATCGACCGCCGC Pst I 680 Forward
CGCGGATCCGCTAGC-ACGAAGGGCAGTTCGG BamHI- NheI Reverse
CCCGCTCGAG-CATCAAAAACCTGCCGC XhoI 681 Forward
AAAAAAGAATTC-ATGACGACGCCGATGGCAATCAGTGC Eco RI Reverse
AAAAAACTGCAG-TTACCGTCTTCCGCAAAAAACAGC Pst I 683 Forward
CGCGGATCCCATATG-TGCAGCACACCGGACAA BamHI- NdeI Reverse
CCCGCTCGAG-GAGTTTTTTTCCGCATACG XhoI 684 Forward
CGCGGATCCCATATG-TGCGGTACTGTGCAAAG BamHI- NdeI Reverse
CCCGCTCGAG-CTCGACCATCTGTTGCG XhoI 685 Forward
CGCGGATCCCATATG-TGTTTGCTTAATAATAAACATT BamHI- NdeI Reverse
CCCGCTCGAG-CTTTTTCCCCGCCGCA XhoI 686 Forward
CGCGGATCCCATATG-TGCGGCGGTTCGGAAG BamHI- NdeI Reverse
CCCGCTCGAG-CATTCCGATTCTGATGAAG XhoI 687 Forward
CGCGGATCCCATATG-TGCGACAGCAAAGTCCA BamHI- NdeI Reverse
CCCGCTCGAG-CTGCGCGGCTTTTTGTT XhoI 690 Forward
CGCGGATCCCATATG-TGTTCTCCGAGCAAAGAC BamHI- NdeI Reverse
CCCGCTCGAG-TATTCGCCCCGTGTTTGG XhoI 691 Forward
CGCGGATCCCATATG-GCCACGGCTTATATCCC BamHI- NdeI Reverse
CCCGCTCGAG-TTTGAGGCAGGAAGAAAG XhoI 694 Forward
CGCGGATCCCATATG-TTGGTTTCCGCATCCGG BamHI- NdeI Reverse
CCCGCTCGAG-TCTGCGTCGGTGCGGT XhoI 695 Forward
CGCGGATCCCATATG-TTGCCTCAAACTCGTCCG BamHI- NdeI Reverse
CCCGCTCGAG-TCGTTTGCGCACGGCT XhoI 696 Forward
CGCGGATCCCATATG-TTGGGTTGCCGGCAGG BamHI- NdeI Reverse
CCCGCTCGAG-TTGATTGCCGCAATGATG XhoI 700a Forward
AAAAAAGAATTC-GCATCGACAGACGGTGTGTCGTGGAC Eco RI Reverse
AAAAAACTGCAG-TTACGCTACCGGCACGACTTCCAAACC Pst I 701 Forward
CGCGGATCCCATATG-AAGACTTGTTTGGATACTTC BamHI- NdeI Reverse
CCCGCTCGAG-TGCCGACAACAGCCTC XhoI 702 Forward
AAAAAAGAATTC-ATGCCGTGTTCCAAAGCCAGTTGGATTTC Eco RI Reverse
AAAAAACTGCAG-TTAACCCCATTCCACCCGGAGAACCGA Pst I 703 Forward
CGCGGATCCGCTAGC-CAAACGCTGGCAACCG BamHI- NheI Reverse
CCCGCTCGAG-TTTTGCAGGTTTGATGTTTG XhoI 704a Forward
AAAAAAGAATTC-GCTTCTACCGGTACGCTGGCGCG Eco RI Reverse AAAAAACTGCAG-
Pst I TTAGTTTTGCCGGATAATATGGCGGGTGCG 707 Forward
CGCGGATCCGCTAGC-GAAATTATTAACGATGCAGA BamHI- NheI Reverse
CCCGCTCGAG-GAAACTGTAATTCAAGTTGA XhoI 708 Forward
CGCGGATCCGCTAGC-CCTTTTAAGCCATCCAAAA BamHI- NheI Reverse
CCCGCTCGAG-TTGACCGGTGAGGACG XhoI 710 Forward
CGCGGATCCCATATG-GAAACCCACGAAAAAATC BamHI- NdeI Reverse
CCCGCTCGAG-AACGGTTTCGGTCAG XhoI 714 Forward
CGCGGATCCCATATG-AGCTATCAAGACATCTT BamHI- NdeI Reverse
CCCGCTCGAG-GCGGTAGGTAAATCGGAT XhoI 716 Forward
CGCGGATCCCATATG-GCCAACAAACCGGCAAG BamHI- NdeI Reverse
CCCGCTCGAG-TTTAGAACCGCATTTGCC XhoI 718 Forward
CGCGGATCCCATATG-GAGCCGATAATGGCAAA BamHI- NdeI Reverse
CCCGCTCGAG-GGCGCGGGCATGGTCTTGTCC XhoI
720 Forward CGCGGATCCCATATG-AGCGGATGGCATACC BamHI- NdeI Reverse
CCCGCTCGAG-TTTTGCATAGCTGTTGACCA XhoI 723 Forward
CGCGGATCCCATATG-CGACCCAAGCCCC BamHI- NdeI Reverse
CCCGCTCGAG-AATGCGAATCCGCCGCC XhoI 725 Forward
CGCGGATCCCATATG-GTGCGCACGGTTAAA BamHI- NdeI Reverse
CCCGCTCGAG-TTGCTTATCCTTAAGGGTTA XhoI 726 Forward
CGCGGATCCCATATG-ACCATCTATTTCAAAAAC BamHI- NdeI Reverse
CCCGCTCGAG-GCCGATGTTTAGCGTCC XhoI 728 Forward
CGCGGATCCCATATG-TTTTGGCTGGGAACGGG BamHI- NdeI Reverse
CCCGCTCGAG-GTGAGAAAGGTCGCGC XhoI 729 Forward
CGCGGATCCCATATG-TGCACCATGATTCCCCA BamHI- NdeI Reverse
GCCCAAGCTT-TTTGTCGGTTTGGGTATC HindIII 731 Forward
CGCGGATCCGCTAGC-GCCGTGCCGGAGG BamHI- NheI Reverse
CCCGCTCGAG-ACGGGCGCGGCAG XhoI 732 Forward
CCGGAATTCTACATATG-TCGAAACCTGTTTTTAAGAA EcoRI- NdeI Reverse
CCCGCTCGAG-CTTCTTATCTTTTTTATCTTTC XhoI 733 Forward
CGCGGATCCCATATG-GCCTGCGGCGGCAA BamHI- NdeI Reverse
CCCGCTCGAG-TCGCTTGCCTCCTTTAC XhoI 734 Forward
CGCGGATCCCATATG-GCCGATACTTACGGCTAT BamHI- NdeI Reverse
CCCGCTCGAG-TTTGAGATTTTGAATCAAAGAG XhoI 735 Forward
CGCGGATCCCATATG-AAGCAGCAGGCGGTCA BamHI- NdeI Reverse
CCCGCTCGAG-ATTTCCGTAGCCGAGGG XhoI 737 Forward
CGCGGATCCCATATG-CACCACGACGGACACG BamHI- NdeI Reverse
CCCGCTCGAG-GTCGTCGCGGCGGGA XhoI 739 Forward
CGCGGATCCCATATG-GCAAAAAAACCGAACA BamHI- NdeI Reverse
CCCGCTCGAG-GAAGAGTTTGTCGAGAATT XhoI 740 Forward
CGCGGATCCCATATG-GCCAATCCGCCCGAAG BamHI- NdeI Reverse
CCCGCTCGAG-AAACGCGCCAAAATAGTG XhoI 741 Forward
CGCGGATCCCATATG-TGCAGCAGCGGAGGG BamHI- NdeI Reverse
CCCGCTCGAG-TTGCTTGGCGGCAAGGC XhoI 743 Forward
CGCGGATCCCATATG-GACGGTGTTGTGCCTGTT BamHI- NdeI Reverse
CCCGCTCGAG-CTTACGGATCAAATTGACG XhoI 745 Forward
CGCGGATCCCATATG-TTTTGGCAACTGACCG BamHI- NdeI Reverse
CCCGCTCGAG-CAAATCAGATGCCTTTAGG XhoI 746 Forward
CGCGGATCCCATATG-TCCGAAAACAAACAAAAC BamHI- NdeI Reverse
CCCGCTCGAG-TTCATTCGTTACCTGACC XhoI 747 Forward
CCGGAATTCTAGCTAGC-CTGACCCCTTGGG EcoRI- NheI Reverse
GCCCAAGCTT-TTTTGATTTTAATTGACTATAGAAC HindIII 749 Forward
CGCGGATCCCATATG-TGCCAGCCGCCG BamHI- NdeI Reverse
CCCGCTCGAG-TTTCAAGCCGAGTATGC XhoI 750 Forward
CGCGGATCCCATATG-TGTTCGCCCGAACCTG BamHI- NdeI Reverse
CCCGCTCGAG-CTTTTTCCCCGCCGCAA XhoI 758 Forward
CGCGGATCCCATATG-AACAATCTGACCGTGTT BamHI- NdeI Reverse
CCCGCTCGAG-TGGCTCAATCCTTTCTGC XhoI 759 Forward
CGCGGATCCGCTAGC-CGCTTCACACACACCAC BamHI- NheI Reverse
CCCGCTCGAG-CCAGTTGTAGCCTATTTTG XhoI 763 Forward
CGCGGATCCCATATG-CTGCCTGAAGCATGGCG BamHI- NdeI Reverse
CCCGCTCGAG-TTCCGCAAATACCGTTTCC XhoI 764 Forward
CGCGGATCCCATATG-TTTTTCTCCGCCCTGA BamHI- NdeI Reverse
CCCGCTCGAG-TCGCTCCCTAAAGCTTTC XhoI 765 Forward
CGCGGATCCCATATG-TTAAGATGCCGTCCG BamHI- NdeI Reverse
CCCGCTCGAG-ACGCCGACGTTTTTTATTAA XhoI 767 Forward
CGCGGATCCCATATG-CTGACGGAAGGGGAAG BamHI- NdeI Reverse
CCCGCTCGAG-TTTCTGTACAGCAGGGG XhoI 768 Forward
CGCGGATCCCATATG-GCCCCGCAAAAACCCG BamHI- NdeI Reverse
CCCGCTCGAG-TTTCATCCCTTTTTTGAGC XhoI 770 Forward
CGCGGATCCCATATG-TGCGGCAGCGGCGAA BamHI- NdeI Reverse
CCCGCTCGAG-GCGTTTGTCGAGATTTTC XhoI 771 Forward
CGCGGATCCCATATG-TCCGTATATCGCACCTTC BamHI- NdeI Reverse
CCCGCTCGAG-CGGTTCTTTAGGTTTGAG XhoI 772 Forward
CGCGGATCCCATATG-TTTGCGGCGTTGGTGG BamHI- NdeI Reverse
CCCGCTCGAG-CAATGCCGACATCAAACG XhoI 774 Forward
CGCGGATCCCATATG-TCCGTTTCACCCGTTCC BamHI- NdeI Reverse
CCCGCTCGAG-TCGTTTGCGCACGGCT XhoI 790 Forward
CGCGGATCCCATATG-GCAAGAAGGTCAAAAAC BamHI- NdeI Reverse
CCCGCTCGAG-GGCGTTGTTCGGATTTCG XhoI 900 Forward
CGCGGATCCCATATG-CCGTCTGAAATGCCG BamHI- NdeI Reverse
CCCGCTCGAG-ATATGGAAAAGTCTGTTGTC XhoI 901 Forward
CGCGGATCCCATATG-CCCGATTTTTCGATG BamHI- NdeI Reverse
CCCGCTCGAG-AAAATGGAACAATACCAGG XhoI 902 Forward.2
CCGGAATTCTACATATG-TTGCACTTTCAAAGGATAATC EcoRI- NdeI Reverse
CCCGCTCGAG-AAAAATGTACAATGGCGTAC XhoI 903 Forward
CCGGAATTCTAGCTAGC-CAGCGTCAGCAGCACAT EcoRI- NheI Reverse
CCCGCTCGAG-GAAACTGTAATTCAAGTTGAA XhoI 904 Forward
AAAAAAGGTACC-ATGATGCAGCACAATCGTTTC Kpn I Reverse
AAACTGCAG-TTAATATCGATAGGTTATATG Pst I 904a Forward
AAAAAAGAATTC-CGGCTCGGCATTGTGCAGATGTTGCA Eco RI Reverse
AAACTGCAG-TTAATATCGATAGGTTATATG Pst I 905 Forward
CGCGGATCCCATATG-AACAAAATATACCGCATC BamHI- NdeI Reverse
CCCGCTCGAG-CCACTGATAACCGACAGAT XhoI 907 Forward
CGCGGATCCCATATG-GGCGCGCAACGTGAG BamHI- NdeI Reverse
CCCGCTCGAG-ACGCCACTGCCAGCG XhoI 908 Forward
AAAGAATTC-GCAGAGTTAGTAGGCGTTAATAAAAATAC Eco RI Reverse
AAACTGCAG-TTAATATGGTTTTGTCGTTCG Pst I 909 Forward
CGCGGATCCCATATG-TGCGCGTGGGAAACTTAT BamHI- NdeI Reverse
CCCGCTCGAG-TCGGTTTTGAAACTTTGGTTTT XhoI 910 Forward
AAAGAATTC-GCATTTGCCGGCGACTCTGCCGAGCG Eco RI Reverse
AAACTGCAG-TCAGCGATCGAGCTGCTCTTT Pst I 911 Forward
AAAGAATTC-GCTTTCCGCGTGGCCGGCGGTGC Eco RI Reverse
AAAAAACTGCAG-GTCGACTTATTCGGCGGCTTTTTCCGC Pst I 912 Forward
AAAAAAGAATTC- Eco RI CAAATCCGTCAAAACGCCACTCAAGTATTGAG Reverse
AAAAAACTGCAG-TTACAGTCCGTCCACGCCTTTCGC Pst I 913 Forward
CGCGGATCCCATATG-GAAACCCGCCCCGC BamHI- NdeI Reverse
CCCGCTCGAG-AGGTTGTGTTCCAGGTTG XhoI 915 Forward
CGCGGATCCCATATG-TGCCGGCAGGCGGAA BamHI- NdeI Reverse
CCCGCTCGAG-TTTGAAAATATAGGTATCAGG XhoI 914 Forward
AAAGAATTC-GACAGAATCGGCGATTTGGAAGCACG Eco RI Reverse
AAACTGCAG-CTATATGCGCGGCAGGACGCTCAACGG Pst I 916 Forward
CGCGGATCCCATATG-GCAATGATGGCGGCTG BamHI- NdeI Reverse
CCCGCTCGAG-TTTGGCGGCATCTTTCAT XhoI 917 Forward
AAAAAAGAATTC-CCTGCCGAAAAACCGGCACCGGC Eco RI Reverse
AAAAAACTGCAG-TTATTTCCCCGCCTTCACATCCTG Pst I 919 Forward
CGCGGATCCCATATG-TGCCAAAGCAAGAGCATC BamHI- NdeI Reverse
CCCGCTCGAG-CGGGCGGTATTCGGG XhoI 920 Forward
CGCGGATCCCATATG-CACCGCGTCTGGGTC BamHI- NdeI Reverse
CCCGCTCGAG-ATGGTGCGAATGACCGA XhoI 921 Forward
AAAAAAGAATTC-TTGACGGAAATCCCCGTGAATCC Eco RI Reverse
AAAAAACTGCAG-TCATTTCAAGGGCTGCATCTTCAT Pst I 922 Forward.2
CGCGGATCCGCTAGC-TGTACGGCGATGGAGGC BamHI- NheI Reverse
CCCGCTCGAG-CAATCCCGGGCCGCC XhoI 923 Forward
CGCGGATCCCATATG-TGTTACGCAATATTGTCCC BamHI- NheI Reverse
CCCGCTCGAG-GGACAAGGCGACGAAG XhoI 925 Forward
CGCGGATCCCATATG-AAACAAATGCTTTTAGCCG BamHI- NdeI Reverse
CCCGCTCGAG-GCCGTTGCATTTGATTTC XhoI 926 Forward
CGCGGATCCCATATG-TGCGCGCAATTACCTC BamHI- NdeI Reverse
CCCGCTCGAG-TCTCGTGCGCGCCG XhoI 927 Forward
CGCGGATCCCATATG-TGCAGCCCCGCAGC BamHI- NdeI Reverse
CCCGCTCGAG-GTTTTTTGCTGACGTAGT XhoI 929a Forward
AAAAAAGAATTC-CGCGGTTTGCTCAAAACAGGGCTGGG Eco RI Reverse
AAAAAATCTAGA-TTAAGAAAGACGGAAACTACTGCC Xba I 931 Forward
AAAAAAGAATTC-GCAACCCATGTTTTGATGGAAAC Eco RI Reverse
AAAAAACTGCAG-TTACTGCCCGACAACAACGCGACG Pst I 935 Forward
AAAAAAGAATTC- Eco RI GCGGATGCGCCCGCGATTTTGGATGACAAGGC Reverse
AAAAAACTGCAG-TCAAAACCGCCAATCCGCCGACAC Pst I 936 Forward
CGCGGATCCCATATG-GCCGCCGTCGGCGC BamHI- NdeI Reverse
CCCGCTCGAG-GCGTTGGACGTAGTTTTG XhoI 937 Forward
AAAAAAGAATTC-CCGGTTTACATTCAAACCGGCGCAAC Eco RI Reverse
AAAAAACTGCAG-TTAAAATGTATGCTGTACGCCAAA Pst I 939a Forward
AAAAAAGAATTC-GGTTCGGCAGCTGTGATGAAACC Eco RI Reverse
AAAAAACTGCAG-TTAACGCAAACCTTGGATAAAGTTGGC Pst I 950 Forward
CGCGGATCCCATATG-GCCAACAAACCGGCAAG BamHI- NdeI
Reverse CCCGCTCGAG-TTTAGAACCGCATTTGCC XhoI 953 Forward
CGCGGATCCCATATG-GCCACCTACAAAGTGGAC BamHI- NdeI Reverse
CCCGCTCGAG-TTGTTTGGCTGCCTCGAT XhoI 957 Forward
CGCGGATCCCATATG-TTTTGGCTGGGAACGGG BamHI- NdeI Reverse
CCCGCTCGAG-GTGAGAAAGGTCGCGC XhoI 958 Forward
CGCGGATCCCATATG-GCCGATGCCGTTGCG BamHI- NdeI Reverse
GCCCAAGCTT-GGGTCGTTTGTTGCGTC HindIII 959 Forward
CGCGGATCCCATATG-CACCACGACGGACACG BamHI- NdeI Reverse
CCCGCTCGAG-GTCGTCGCGGCGGGA XhoI 961 Forward
CGCGGATCCCATATG-GCCACAAGCGACGACG BamHI- NdeI Reverse
CCCGCTCGAG-CCACTCGTAATTGACGC XhoI 972 Forward AAAAAAGAATTC- Eco RI
TTGACTAACAGGGGGGGAGCGAAATTAAAAAC Reverse
AAAAAATCTAGA-TTAAAAATAATCATAATCTACATTTTG Xba I 973 Forward
AAAAAAGAATTC-ATGGACGGCGCACAACCGAAAAC Eco RI Reverse
AAAAAACTGCAG-TTACTTCACGCGGGTCGCCATCAGCGT Pst I 982 Forward
CGCGGATCCCATATG-GCAGCAAAAGACGTAC BamHI- NdeI Reverse
CCCGCTCGAG-CATCATGCCGCCCATCC XhoI 983 Forward
CGCGGATCCCATATG-TTAGCTGTTGCAACAACAC BamHI- NdeI Reverse
CCCGCTCGAG-GAACCGGTAGCCTACG XhoI 987 Forward
CGCGGATCCCATATG-CCCCCACTGGAAGAAC BamHI- NdeI Reverse
CCCGCTCGAG-TAATAAACCTTCTATGGGC XhoI 988 Forward
CGCGGATCCCATATG-TCTTTAAATTTACGGGAAAAAG BamHI- NdeI Reverse
GCCCAAGCTT-TGATTTGCCTTTCCGTTTT HindIII 989 Forward
CCGGAATTCTACATATG-GTCCACGCATCCGGCTA EcoRI- NdeI Reverse
CCCGCTCGAG-TTTGAATTTGTAGGTGTATTGC XhoI 990 Forward.2
CGCGGATCCGCTAGC-TTCAGAGCTCAGCTT BamHI- NheI Reverse
CCCGCTCGAG-AAACAGCCATTTGAGCGA XhoI 992 Forward
CGCGGATCCCATATG-GACGCGCCCGCCCG BamHI- NdeI Reverse
CCCGCTCGAG-CCAAATGCCCAACCATTC XhoI 993 Forward
CGCGGATCCCATATG-GCAATGCTGATTGAAATCA BamHI- NdeI Reverse
CCCGCTCGAG-GAACACATCGCGCCCG XhoI 996 Forward
CGCGGATCCCATATG-TGCGGCAGAAAATCCGC BamHI- NdeI Reverse
CCCGCTCGAG-TCTAAACCCCTGTTTTCTC XhoI 997 Forward
CCGGAATTCTAGCTAGC-CGGCACGCCGACGTT EcoRI- NheI Reverse
CCCGCTCGAG-GACGGCATCGCTCAGG XhoI
Underlined sequences indicate restriction recognition sites.
[0328] The following DNA and amino acid sequences are identified by
titles of the following form: [g, m, or a] [#].[seq or pep], where
"g" means a sequence from N. gonorrhoeae, "m" means a sequence from
N. meningitidis B, and "a" means a sequence from N. meningitidis A;
"#" means the number of the sequence; "seq" means a DNA sequence,
and "pep" means an amino acid sequence. For example, "g001.seq"
refers to an N. gonorrohoeae DNA sequence, number 1. The presence
of the suffix "-1" to these sequences indicates an additional
sequence found for the same ORF. Further, open reading frames are
identified as ORF #, where "#" means the number of the ORF,
corresponding to the number of the sequence which encodes the ORF,
and the ORF designations may be suffixed with ".ng" or ".a",
indicating that the ORF corresponds to a N. gonorrhoeae sequence or
a N. meningitidis A sequence, respectively. Computer analysis was
performed for the comparisons that follow between "g", "m", and "a"
peptide sequences; and therein the "pep" suffix is implied where
not expressly stated.
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1>:
TABLE-US-00105 g001.seq 1 ATGCTGCCGC AGGGGAAGGC GGCGCGGAGG
GTGTCGGCGA ACGAGGTGTC 51 CGGCAGGGCT TGCGCCCGGA TGGTGCTGGT
CATCTGCCAG ACGCTGCCGA 101 AACGCGATAC TTTAAACGGC TCGGGTACGC
ATACTTTACC GGTTTGGGCG 151 ATTTTGCCGA GGTCGTTGCG CAGCAAATCG
ACAATCATCA CGTTTTCGGC 201 GCGGTTTTTC GGGTCGGTTT GTAACTCGGC
GGCGCGGCGT TCGTCTTGTC 251 CGTCGCCCAA AATCGGCGCG GTGCCTTTCA
TCGGTTCGGT GCTGATGGTG 301 CCGTCTGAAG CGATGTTGAG GAAGAGTTCG
GGCGAGAAAC ACAGCGTCCA 351 CGCGGATTGC CCGGCTTCAT CGGGCAGGTG
GGACAATACG GCATAG
This corresponds to the amino acid sequence <SEQ ID 2; ORF
001.ng>:
TABLE-US-00106 g001.pep 1 MLPQGKAARR VSANEVSGRA CARMVLVICQ
TLPKRDTLNG SGTHTLPVWA 51 ILPRSLRSKS TIITFSARFF GSVCNSAARR
SSCPSPKIGA VPFIGSVLMV 101 PSEAMLRKSS GEKHSVHADC PASSGRWDNT A*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3>:
TABLE-US-00107 m001.seq 1 ATGCTGCCGC AGGGGAAGGC GGCGCGGAGG
ATGTCGGCGA ACGAGGTGTG 51 CGGcAssCTT ss.GCTTGGA yGGTGCTGGT
CATCTGCCAA ACGCTGCCGA 101 AACGCGATAC TTTAAACGGT TCGGGTACGC
ATACTGTGCC GGTTTGGGCG 151 ATTTTGCCGA GATCGTTACG CAGCAAATCG
ACAATCATCA CGTTTTCGGC 201 GCGGTTTTTC GGGTCTGCTT GCAACTCGGC
GGCGCGGCGT TCGTCTTGTC 251 CGTCGCCCAA AATCGGCGCG GTGCCTTTCA
TCGGTTCGGT GCTGATGGTG 301 CCGTCCGAAC CGATTTTGAG GAAGAGTTCG
GGCGAGAAAC ACAGCGTCCA 351 CGCGGATTGC CCCTCCGCAT CGGGCAGGTG
GGACAAGACG GCATAG
This corresponds to the amino acid sequence <SEQ ID 4; ORF
001>:
TABLE-US-00108 m001.pep 1 MLPQGKAARR MSANEVCGXL XAWXVLVICQ
TLPKRDTLNG SGTHTVPVWA 51 ILPRSLRSKS TIITFSARFF GSACNSAARR
SSCPSPKIGA VPFIGSVLMV 101 PSEPILRKSS GEKHSVHADC PSASGRWDKT A*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 5>:
TABLE-US-00109 a001.seq 1 ATGCTGCCGC AGGGGAAGGC GGCGCGGAGG
ATGTCGGCGA ACGAGGTGTG 51 CGGCAAGGCT TGGGCTTGGA TGGTGCTGGT
CATCTGCCAA ACGCTGCCGA 101 AACGCGATAC TTTAAACGGT TCGGGTACGC
ATACTGTGCC GGTTTGGGCG 151 ATTTTGCCGA GGTCGTTACG CAGCAAATCG
ACAATCATCA CGTTTTCGGC 201 GCGGTTTTTC GGGTCTGCTT GCAACTCGGC
GGCGCGGCGT TCGTCTTGTC 251 CGTCGCCCAA AATCGGCGCG GTGCCTTTCA
TCGGTTCGGT GCTGATGGTG 301 CCGTCCGAAC CGATTTTGAG GAAGAGTTCG
GGCGAGAAAC ACAGCGTCCA 351 CGCGGATTGC CCTTGTGCAT CGGGCAGGTG
GGACAAAACG GCATAG
This corresponds to the amino acid sequence <SEQ ID 6; ORF
001.a>:
TABLE-US-00110 a001.pep 1 MLPQGKAARR MSANEVCGKA WAWMVLVICQ
TLPKRDTLNG SGTHTVPVWA 51 ILPRSLRSKS TIITFSARFF GSACNSAARR
SSCPSPKIGA VPFIGSVLMV 101 PSEPILRKSS GEKHSVHADC PCASGRWDKT A*
m001/a001 96.2% identity over a 131 aa overlap 10 20 30 40 50 60
m001.pep
MLPQGKAARRMSANEVCGXLXAWXVLVICQTLPKRDTLNGSGTHTVPVWAILPRSLRSKS
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||| a001.pep
MLPQGKAARRMSANEVCGKAWAWMVLVICQTLPKRDTLNGSGTHTVPVWAILPRSLRSKS 10 20
30 40 50 60 70 80 90 100 110 120 m001.pep
TIITFSARFFGSACNSAARRSSCPSPKIGAVPFIGSVLMVPSEPILRKSSGEKHSVHADC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
a001.pep
TIITFSARFFGSACNSAARRSSCPSPKIGAVPFIGSVLMVPSEPILRKSSGEKHSVHADC 70 80
90 100 110 120 130 m001.pep PSASGRWDKTAX | |||||||||| a001.pep
PCASGRWDKTAX 130
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 001
shows 89.3% identity over a 131 aa overlap with a predicted ORF
(ORF 001.ng) from N. gonorrhoeae:
TABLE-US-00111 m001/g001 10 20 30 40 50 60 m001.pep
MLPQGKAARRMSANEVCGXLXAWXVLVICQTLPKRDTLNGSGTHTVPVWAILPRSLRSKS
||||||||||:||||| | | |||||||||||||||||||||:|||||||||||||| g001
MLPQGKAARRVSANEVSGRACARMVLVICQTLPKRDTLNGSGTHTLPVWAILPRSLRSKS 10 20
30 40 50 60 70 80 90 100 110 120 m001.pep
TIITFSARFFGSACNSAARRSSCPSPKIGAVPFIGSVLMVPSEPILRKSSGEKHSVHADC
||||||||||||:|||||||||||||||||||||||||||||| :||||||||||||||| g001
TIITFSARFFGSVCNSAARRSSCPSPKIGAVPFIGSVLMVPSEAMLRKSSGEKHSVHADC 70 80
90 100 110 120 130 m001.pep PSASGRWDKTAX |::|||||:||| g001
PASSGRWDNTAX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 7>:
TABLE-US-00112 g003.seq 1 ATGGTCGTAT TCGTGGCTGA AGGCGTATTC
GGTCGCGCTG TTTTGGGTCA 51 CTTGGTATTG CTCTTCGGTC AGGGTGCGTT
TGAGTTCGGC GTCACTCGGT 101 TTTTTATACG TTGCCGCGTC GAAGCCTTTG
CCTTGCGGTG CGGCTTTGGT 151 TTTGCCCGGC AGCGGTTCGT CGGCTTTGCG
GATGTCGATG TGGCAGTAGC 201 CGTTGGGGTT TTTAATCAGG TAGTCCTGAT
GGTATTCCTC GGCGTCGTAG 251 AAGTTTTTCA GCGGTTCGTT TTCAACAACG
AGGGGCAGTT GGTATTTTTG 301 CTGCTCGCGT TTGAGGGCGG CGGCGATGAC
GGCTTTTTCG GCGGGGTCGG 351 TGTAGTACAC GCCGCTGCGG TATTGCGTGC
CGGTGTCGTT ACCCTGTTTG 401 TTGAGGCTGG TCGGATCAAC GACGCGGAAA
TAATATTGCA GGATGTCGTC 451 CAGgCTGagt TTGTCGGCAT CGTaggtcac
tTTGACGGTC TCGGCATGAC 501 CCGTATGGCG GTaggacact tctTCgtanc
TcGGGtTTTC CGTGttGCCG 551 TTGGCgttac cGGATACCGC gtcaACCACG
CCGTcgatgc gttggaAATa 601 ggCTTCCAAg ccccaaaagc agccgccggc
gaagtaaatg gtgcccgtgt 651 tcatgattGC TGa
This corresponds to the amino acid sequence <SEQ ID 8; ORF
003.ng>:
TABLE-US-00113 g003.pep 1 MVVFVAEGVF GRAVLGHLVL LFGQGAFEFG
VTRFFIRCRV EAFALRCGFG 51 FARQRFVGFA DVDVAVAVGV FNQVVLMVFL
GVVEVFQRFV FNNEGQLVFL 101 LLAFEGGGDD GFFGGVGVVH AAAVLRAGVV
TLFVEAGRIN DAEIILQDVV 151 QAEFVGIVGH FDGLGMTRMA VGHFFVRVFR
VAVGVTGYRV NHAVDALEIG 201 FQAPKAAAGE VNGARVHDC
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 9>:
TABLE-US-00114 m003.seq 1 ATGGTCGTAT TCGTGGCTGA AGGCATATTC
GGTCGCGCTG TTTTGGGTAA 51 CTTGsTATTG CTCTTCGGTC AGGGTGCGTT
TGAGTTCGGC GTCACTCGGT 101 TTTTTATACG TTGCCGCGTC GAAGCCTTTG
CCTTGCGGGG CGGTCTTGGT 151 TTTGCCCGGC AGCGGTTCGT CAGCkTTGCG
GATGTCGATG TGGCAGTAGC 201 CGTTGGGGTT TTTAATCAAG TAGTCCTGAT
GGTATTCCTC GGCATCGTAG 251 AAGTTTTtCA GCGGCTCGTT TTCAACAACG
AGGGGCAGTT GGTATTTTTG 301 CTGCTCGCGT TTGAGGGCGk CGGCGATGAC
GGCTTTTTCG kCGGGGTCGG 351 TGTAGTACAC GCCGCTGCGG TATTGCGTAC
CGGTGTCGTT GCCCTGTTTG 401 TTGAGGCTGG TCGGATCAAC GACGCGGAAG
AAATATTGCA GGATGTCGTC 451 TAGGCTGAGT TTGTCGGCAT CGTAGGTCAC
TTTGACGGTT TCGGCGTGGC 501 CCGTATGGCG GTAGGACACG TCTTCATAGC
TCGGATTTTT CGTGTTGCCG 551 TTGGCGTAGC CGGATACCGC GTCAACCACG
CCGTCGATGC GTTGGAAATA 601 GGCTTCCAAG CCCCAGAAGC AGCg.CCGGC
GAGGTAAATG GTGCGCGTGT 651 TCATGATTTT TGA
This corresponds to the amino acid sequence <SEQ ID 10; ORF
003>:
TABLE-US-00115 m003.pep Length: 221 1 MVVFVAEGIF GRAVLGNLXL
LFGQGAFEFG VTRFFIRCRV EAFALRGGLG 51 FARQRFVSXA DVDVAVAVGV
FNQVVLMVFL GIVEVFQRLV FNNEGQLVFL 101 LLAFEGXGDD GFFXGVGVVH
AAAVLRTGVV ALFVEAGRIN DAEEILQDVV 151 *AEFVGIVGH FDGFGVARMA
VGHVFIARIF RVAVGVAGYR VNHAVDALEI 201 GFQAPEAAXG EVNGARVHDF *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 11>:
TABLE-US-00116 a003.seq 1 ATGGTCGTAT TCGTGGCTGA AGGCATATTC
GGTCGCGCTG TTTTGGGTAA 51 CTTGGTATTG CTCTTCGGTC AGGGTGCGTT
TGAGTTCGGC GTCACTCGGT 101 TTTTTATACG TTGCCGCGTC GAAGCCTTTG
CCTTGCGGTG CGGTCTTGGT 151 TTTGCCCGGC AGCGGTTCGT CGGCTTTGCG
GATATCGATG TGGCAGTAGC 201 CGTTGGGGTT TTTAATCAAG TAGTCCTGAT
GGTATTCCTC GGCATCGTAG 251 AAGTTTTTCA GCGGCTCGTT TTCAACAACG
AGGGGCAGTT GGTATTTTTG 301 CTGCTCGCGT TTGAGGGCGG CGGCGATGAC
GGCTTTTTCG GCGGGGTCGG 351 TGTAGTACAC GCCGCTGCGG TATTGCGTAC
CGGTGTCGTT GCCCTGTTTG 401 TTGAGGCTGG TCGGATCAAC GACGCGGAAG
AAATATTGCA GGATGTCGTC 451 TAGGCTGAGT TTGTCGGCAT CGTAGGTCAC
TTTGACGGTT TCGGCGTGGC 501 CCGTATGGCG GTAGGACACG TCTTCATAGC
TCGGATTTTT CGTGTTGCCG 551 TTGGCGTAGC CGGATACCGC GTCAACCACG
CCGTCGATGC GTTGGAAATA 601 GGCTTCCAAG CCCCAGAAGC AGCCGCCGGC
GAGGTAGATG GTGCGCGTGT 651 TCATGATTTT TGA
This corresponds to the amino acid sequence <SEQ ID 12; ORF
003.a>:
TABLE-US-00117 a003.pep 1 MVVFVAEGIF GRAVLGNLVL LFGQGAFEFG
VTRFFIRCRV EAFALRCGLG 51 FARQRFVGFA DIDVAVAVGV FNQVVLMVFL
GIVEVFQRLV FNNEGQLVFL 101 LLAFEGGGDD GFFGGVGVVH AAAVLRTGVV
ALFVEAGRIN DAEEILQDVV 151 *AEFVGIVGH FDGFGVARMA VGHVFIARIF
RVAVGVAGYR VNHAVDALEI 201 GFQAPEAAAG EVDGARVHDF * m003/a003 95.9%
identity over a 220 aa overlap 10 20 30 40 50 60 m003.pep
MVVFVAEGIFGRAVLGNLXLLFGQGAFEFGVTRFFIRCRVEAFALRGGLGFARQRFVSXA
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||: | a003
MVVFVAEGIFGRAVLGNLVLLFGQGAFEFGVTRFFIRCRVEAFALRCGLGFARQRFVGFA 10 20
30 40 50 60 70 80 90 100 110 120 m003.pep
DVDVAVAVGVFNQVVLMVFLGIVEVFQRLVFNNEGQLVFLLLAFEGXGDDGFFXGVGVVH
|:|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| a003
DIDVAVAVGVFNQVVLMVFLGIVEVFQRLVFNNEGQLVFLLLAFEGGGDDGFFGGVGVVH 70 80
90 100 110 120 130 140 150 160 170 180 m003.pep
AAAVLRTGVVALFVEAGRINDAEEILQDVVXAEFVGIVGHFDGFGVARMAVGHVFIARIF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a003
AAAVLRTGVVALFVEAGRINDAEEILQDVVXAEFVGIVGHFDGFGVARMAVGHVFIARIF 130
140 150 160 170 180 190 200 210 220 m003.pep
RVAVGVAGYRVNHAVDALEIGFQAPEAAXGEVNGARVHDFX
|||||||||||||||||||||||||||| |||:|||||||| a003
RVAVGVAGYRVNHAVDALEIGFQAPEAAAGEVDGARVHDFX 190 200 210 220
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 003
shows 88.6% identity over a 219 aa overlap with a predicted ORF
(ORF 003.ng) from N. gonorrhoeae:
TABLE-US-00118 m003/g003 10 20 30 40 50 60 m003.pep
MVVFVAEGIFGRAVLGNLXLLFGQGAFEFGVTRFFIRCRVEAFALRGGLGFARQRFVSXA
||||||||:|||||||:| ||||||||||||||||||||||||||| |:||||||||: | g003
MVVFVAEGVFGRAVLGHLVLLFGQGAFEFGVTRFFIRCRVEAFALRCGFGFARQRFVGFA 10 20
30 40 50 60 70 80 90 100 110 120 m003.pep
DVDVAVAVGVFNQVVLMVFLGIVEVFQRLVFNNEGQLVFLLLAFEGXGDDGFFXGVGVVH
|||||||||||||||||||||:||||||:||||||||||||||||| |||||| |||||| g003
DVDVAVAVGVFNQVVLMVFLGVVEVFQRFVFNNEGQLVFLLLAFEGGGDDGFFGGVGVVH 70 80
90 100 110 120 130 140 150 160 170 180 m003.pep
AAAVLRTGVVALFVEAGRINDAEEILQDVVXAEFVGIVGHFDGFGVARMAVGHVFIARIF
||||||:|||:|||||||||||| |||||| ||||||||||||:|::|||||| |: |:| g003
AAAVLRAGVVILFVEAGRINDAEIILQDVVQAEFVGIVGHFDGLGMTRMAVGHFFV-RVF 130
140 150 160 170 180 190 200 210 220 m003.pep
RVAVGVAGYRVNHAVDALEIGFQAPEAAXGEVNGARVHDFX
||||||:||||||||||||||||||:|| |||||||||| g003
RVAVGVTGYRVNHAVDALEIGFQAPKAAAGEVNGARVHDC 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 13>:
TABLE-US-00119 g004.seq 1 ATGgtagAAC GGCATATCCA GCATTTGCGG
AACGGTCATC TTCATTTGAT 51 GCGCCCATGC CAACAagtga gccaAAtgtT
CGGCGGCAGG GCCTacgatT 101 TCCGCGCCGA TAAagcggcc gGTGgctTTT
tcgGCataca ggcgcaTatg 151 gCCTTTGTTT ACCAgcatca cgcggctgcg
accttgaTTT TTGAACGATA 201 CTTCGCCgaT GACAAATTCG TCGGCTTGGT
ATTGCGCGGC AACCTGCGCG 251 TATTTCAAAC CGACAAAGCC GATTTGCgga
ctggtaaACA CCACGCCAAT 301 GGTgctgcgg cGCAAACCGC TGCCGATATt
cgGgtagcgg ccccgcgtta 351 ttgcccggca atcttacctt ggtcggcggc
ttcatGCAGC AGGGGCagtt 401 ggttggacgc gtcgcccgca ataAAGATAT
GCGGAATgct ggtCTGCATg 451 gtCAGCGGAT CGGCAACGGG tacgccgcgc
gcgtctttgT CGATATTGAT 501 GTTTTCCAAA CCGATATtgT CAACGTTCGG
ACGGCgACCT ACGGCTGCCA 551 ACATATATTC GGCAACAAAT ACGCCTTTTT
CGCCATCCTG CTCCCAATGG 601 ACTtctACAT TGCCGTCTGC GTCGAGTTTG
ACCTCGGTTT TAGCATCCAG 651 ATGCAGTTTC AATtctTCTC CGAACACGGC
TTTCGCCTCG TCTGAAACAA 701 CGGGGTCGGA AATGCCGCCG ATGATTCCGC
CCAAACCGAA AATTTCAACT 751 TTCACACCCA AACGGTGCAA TGCCTGA
This corresponds to the amino acid sequence <SEQ ID 14; ORF
004.ng>:
TABLE-US-00120 g004.pep 1 MVERHIQHLR NGHLHLMRPC QQVSQMFGGR
AYDFRADKAA GGFFGIQAHM 51 AFVYQHHAAA TLIFERYFAD DKFVGLVLRG
NLRVFQTDKA DLRTGKHHAN 101 GAAAQTAADI RVAAPRYCPA ILPWSAASCS
RGSWLDASPA IKICGMLVCM 151 VSGSATGTPR ASLSILMFSK PILSTFGRRP
TAANIYSATN TPFSPSCSQW 201 TSTLPSASSL TSVLASRCSF NSSPNTAFAS
SETTGSEMPP MIPPKPKIST 251 FTPKRCNA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 15>:
TABLE-US-00121 m004.seq 1 ATGGTAGAAC GGCATATCCA GCATTTGCGG
AACGGTCATC TTCATTTGAT 51 GTGCCCAAGC CAACAGGTGC GCCAAATGTT
CGGCGGCAGG GCCTACGATT 101 TCCGCGCCGA TAAAGCGGCC GGTGGCTTTT
TCGGCATACA GGCGCATATG 151 GCCTTTGTTC ACCAGCATCA CGCGGCTGCG
GCCTTGGTTT TTGAACGATA 201 CTTCGCCGAT GACAAATTCG TCGGCTTGGT
ATTGCGCGGC AACCTGCGCG 251 TATTTCAGAC CGACAAAGCC GATTTGCGGA
CTGGTAAACA CCACGCCGAT 301 GGTGCTGCGC CGCAAACCGC CGCCGATATT
CGGGTAGCGG CCGCGTTATC 351 GCCGGCAATC TTGCCTTGGT CGGCAGCTTC
ATGCAGCAGA GGCAGTTGGT 401 TGGACGCATC GCCTGCGATG AAGATATGCG
GAATACTGGT CTGCATGGTC 451 AGCGGGTCGG CAACAGGTAC GCCGCGCGCA
TCTTTTTCGA TATTGATATT 501 TTCCAAACCG ATATTGTCAA CGTTCGGACG
GCGGCCCACG GCTGCCAGCA 551 TATATTCGGC AACAAATACG CCTTTTTCGC
CATCCTGCTC CCAATGGACT 601 TCTACATTGC CGTCTGCATC GAGTTTGACC
TCGGTTTTAG CATCCAGATG 651 CAGTTTCAAT TCTTCGCCGA ACACGGCGTT
CGCCTCGTCT GAAACGACGG 701 GGTCGGAAAT GCCGCCGATG ATTCCGCCCA
AACCGAAAAT TTCAACTTTC 751 ACGCCCAAAC GGTGCAATGC CTGA
This corresponds to the amino acid sequence <SEQ ID 16; ORF
004>:
TABLE-US-00122 m004.pep 1 MVERHIQHLR NGHLHLMCPS QQVRQMFGGR
AYDFRADKAA GGFFGIQAHM 51 AFVHQHHAAA ALVFERYFAD DKFVGLVLRG
NLRVFQTDKA DLRTGKHHAD 101 GAAPQTAADI RVAAALSPAI LPWSAASCSR
GSWLDASPAM KICGILVCMV 151 SGSATGTPRA SFSILIFSKP ILSTFGRRPT
AASIYSATNT PFSPSCSQWT 201 STLPSASSLT SVLASRCSFN SSPNTAFASS
ETTGSEMPPM IPPKPKISTF 251 TPKRCNA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 17>:
TABLE-US-00123 a004.seq 1 ATGGTAGAAC GGCATATCCA GCATTTGCGG
AACGGTCATC TTCATTTGAT 51 GTGCCCAAGC CAACAGGTGC GCCAAATGTT
CGGCGGCCGG ACCTACGATT 101 TCTGCGCCGA TGAAGCGGCC GGTGGCTTTT
TCGGCATACA GGCGCATATG 151 GCCTTTGTTT ACCAGCATCA CGCGGCTGCG
GCCTTGGTTT TTGAACGATA 201 CTTCGCCGAT GACAAATTCG TCGGCTTGGT
ATTGCGCGGC AACCTGCGCG 251 TATTTCAAAC CGACAAAGCC GATTTGCGGA
CTGGTGAACA CTACGCCGAT 301 GGTGCTGCGG CGCAAACCGC CGCCGATATT
CGGGTAGCGG CCGCGTTATC 351 GCCGGCAATC TTGCCTTGGT CGGCGGCTTC
ATGCAGCAGG GGCAGTTGGT 401 TGGACGCGTC GCCCGCAATA AAGATATGCG
GAATACTGGT CTGCATAGTC 451 AGCGGATCGG CAACGGGTAC GCCGCGCGCA
TCTTTTTCGA TATTGATGTT 501 TTCCAAACCG ATATTGTCAA CGTTCGGACG
GCGGCCTACG GCTGCCAGCA 551 TATATTCGGC AACAAATACG CCTTTTTCGC
CATCCTGCTC CCAATGGACT 601 TCTACATTGC CGTCTGCGTC GAGTTTGGCC
TCGGTTTTAG CATCCAAATG 651 CAGTTTCAAT TCTTCACCGA ACACGGCTTT
CGCCTCGTCT GAAACGACGG 701 GGTCGGAAAT GCCGCCGATG ATGCCACCCA
AACCGAAAAT TTCAACTTTC 751 ACGCCCAAAC GGTGCAATGC CTGA
This corresponds to the amino acid sequence <SEQ ID 18; ORF
004.a>:
TABLE-US-00124 a004.pep 1 MVERHIQHLR NGHLHLMCPS QQVRQMFGGR
TYDFCADEAA GGFFGIQAHM 51 AFVYQHHAAA ALVFERYFAD DKFVGLVLRG
NLRVFQTDKA DLRTGEHYAD 101 GAAAQTAADI RVAAALSPAI LPWSAASCSR
GSWLDASPAI KICGILVCIV 151 SGSATGTPRA SFSILMFSKP ILSTFGRRPT
AASIYSATNT PFSPSCSQWT 201 STLPSASSLA SVLASKCSFN SSPNTAFASS
ETTGSEMPPM MPPKPKISTF 251 TPKRCNA* m004/a004 94.9% identity over a
257 aa overlap 10 20 30 40 50 60 m004.pep
MVERHIQHLRNGHLHLMCPSQQVRQMFGGRAYDFRADKAAGGFFGIQAHMAFVHQHHAAA
||||||||||||||||||||||||||||||:||| ||:|||||||||||||||:|||||| a004
MVERHIQHLRNGHLHLMCPSQQVRQMFGGRTYDFCADEAAGGFFGIQAHMAFVYQHHAAA 10 20
30 40 50 60 70 80 90 100 110 120 m004.pep
ALVFERYFADDKFVGLVLRGNLRVFQTDKADLRTGKHHADGAAPQTAADIRVAAALSPAI
|||||||||||||||||||||||||||||||||||:|:||||| |||||||||||||||| a004
ALVFERYFADDKFVGLVLRGNLRVFQTDKADLRTGEHYADGAAAQTAADIRVAAALSPAI 70 80
90 100 110 120 130 140 150 160 170 180 m004.pep
LPWSAASCSRGSWLDASPAMKICGILVCMVSGSATGTPRASFSILIFSKPILSTFGRRPT
|||||||||||||||||||:||||||||:||||||||||||||||:|||||||||||||| a004
LPWSAASCSRGSWLDASPAIKICGILVCIVSGSATGTPRASFSILMFSKPILSTFGRRPT 130
140 150 160 170 180 190 200 210 220 230 240 m004.pep
AASIYSATNTPFSPSCSQWTSTLPSASSLTSVLASRCSFNSSPNTAFASSETTGSEMPPM
|||||||||||||||||||||||||||||:|||||:|||||||||||||||||||||||| a004
AASIYSATNTPFSPSCSQWTSTLPSASSLASVLASKCSFNSSPNTAFASSETTGSEMPPM 190
200 210 220 230 240 250 m004.pep IPPKPKISTFTPKRCNAX
:||||||||||||||||| a004 MPPKPKISTFTPKRCNAX 250
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 004
shows 93.4% identity over a 258 aa overlap with a predicted ORF
(ORF 004.ng) from N. gonorrhoeae:
TABLE-US-00125 m004/g004 10 20 30 40 50 60 m004.pep
MVERHIQHLRNGHLHLMCPSQQVRQMFGGRAYDFRADKAAGGFFGIQAHMAFVHQHHAAA
||||||||||||||||| | ||| |||||||||||||||||||||||||||||:|||||| g004
MVERHIQHLRNGHLHLMRPCQQVSQMFGGRAYDFRADKAAGGFFGIQAHMAFVYQHHAAA 10 20
30 40 50 60 70 80 90 100 110 119 m004.pep
ALVFERYFADDKFVGLVLRGNLRVFQTDKADLRTGKHHADGAAPQTAADIRVAAA-LSPA
:|:||||||||||||||||||||||||||||||||||||:||| |||||||||| || g004
TLIFERYFADDKFVGLVLRGNLRVFQTDKADLRTGKHHANGAAAQTAADIRVAAPRYCPA 70 80
90 100 110 120 120 130 140 150 160 170 179 m004.pep
ILPWSAASCSRGSWLDASPAMKICGILVCMVSGSATGTPRASFSILIFSKPILSTFGRRP
||||||||||||||||||||:||||:||||||||||||||||:|||:||||||||||||| g004
ILPWSAASCSRGSWLDASPAIKICGMLVCMVSGSATGTPRASLSILMFSKPILSTFGRRP 130
140 150 160 170 180 180 190 200 210 220 230 239 m004.pep
TAASIYSATNTPFSPSCSQWTSTLPSASSLTSVLASRCSFNSSPNTAFASSETTGSEMPP
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g004
TAANIYSATNTPFSPSCSQWTSTLPSASSLTSVLASRCSFNSSPNTAFASSETTGSEMPP 190
200 210 220 230 240 240 250 m004.pep MIPPKPKISTFTPKRCNAX
|||||||||||||||||| g004 MIPPKPKISTFTPKRCNA 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 19>:
TABLE-US-00126 g005.seq 1 ATGGGGATGG ACAATATTGA TATGTTCATG
CCTGAACAAG AGGAAATCCA 51 ATCAATGTGG AAAGAAATTT TACTGAATTA
CGGTATTTTC CTGCTCGAAC 101 TGCTTACCGT GTTCGGCGCA ATTGCGCTGA
TTGTGTTGGC TATCGTACAG 151 AGTAAGAAAC AGTCGGAAAG CGGCAGTGTC
GTACTGACAG ATTTTTCGGA 201 AAATTATAAA AAACAGCGGC AATCGTTTGA
AACATTCTTT TTAAGCGAGG 251 AAGAGACAAA ACATCAGGAA AAAAAAGAAA
AGAAAAAGGA AAAGGCGGAA 301 GCCAAAGCAG AGAAAAAGCG TTTGAAGGAG
GGCGGGGAGA AATCTGCCGA 351 AACGCAAAAA TCCCGCCTTT TTGTGTTGGA
TTTTGACGGC GATTTGTATG 401 CACACGCCGT AGAATCCTTG CGTCATGAGA
TTACGGCGGT GCTTTTGATT 451 GCCAAGCCTG AAGATGAGGT TCTGCTCAGA
TTGGAAAGTC CGGGCGGCGT 501 GGTTCACGGT TACGGTTTGG CGGCTTCGCA
GCTTAGGCGT TTGCGCGAAC 551 GCAATATTCC GCTGAccgtc gccgTCGATA
AGGTCGCGGC AAGCGgcggc 601 tatatgatgg cgtgtgtgGC GGATAAAATT
GTTTCCGCtc cgtttgcggt 651 catcggttcg gtgggtgtgg tgGcggaagt
gcCGAATATC CAccgCctGT 701 TGAAAAAACA TGATATTGAT GTGGATGTGA
TGACGGCGGG CGAATTTAAG 751 CGCACGGTTA CTTTTATGGG TGAAAATACG
GAAAAGGGCA AACAGAAATT 801 CCGGCAGGAA CTGGAGGAAA CGCATCAGTT
GTTCAAGCAG TTTGTCAGTG 851 AAAACCGCCC CGGGTTGGAT ATTGAAAAAA
TAGCGACGGG CGAGCATTGG 901 TTCGGCCGGC AGGCGTTGGC GTTGAACTTG
ATTGACGAGA TTTCGACCAG 951 TGATGATTTG TTGTTGAAAG CGTTTGAAAA
CAAACAGGtt aTCGAAGTGA 1001 AATATCAGGA GAAGCGAAGC CTGATCCAGC
GCATTGGTTT GCAGGCGGAA 1051 GCTTCCGTTG AAAAGTTGTT TGCCAAACTT
GTCAACCGGC GAGCGGATGT 1101 GATGTAG
This corresponds to the amino acid sequence <SEQ ID 20; ORF
005.ng>:
TABLE-US-00127 g005.pep 1 MGMDNIDMFM PEQEEIQSMW KEILLNYGIF
LLELLTVFGA IALIVLAIVQ 51 SKKQSESGSV VLTDFSENYK KQRQSFETFF
LSEEETKHQE KKEKKKEKAE 101 AKAEKKRLKE GGEKSAETQK SRLFVLDFDG
DLYAHAVESL RHEITAVLLI 151 AKPEDEVLLR LESPGGVVHG YGLAASQLRR
LRERNIPLTV AVDKVAASGG 201 YMMACVADKI VSAPFAVIGS VGVVAEVPNI
HRLLKKHDID VDVMTAGEFK 251 RTVTFMGENT EKGKQKFRQE LEETHQLFKQ
FVSENRPGLD IEKIATGEHW 301 FGRQALALNL IDEISTSDDL LLKAFENKQV
IEVKYQEKRS LIQRIGLQAE 351 ASVEKLFAKL VNRRADVM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 21>:
TABLE-US-00128 m005.seq 1 ATGGACAATA TTGACATGTT CATGCCTGAA
CAAGAGGAAA TCCAATCAAT 51 GTGGAAAGAA ATTTTACTGA ATTACGGTAT
TTTCCTGCTC GAACTGCTTA 101 CCGTGTTCGG CGCAATTGCG CTGATTGTGT
TGGCTATCGT ACAGAGTAAG 151 AAACAGTCGG AwAGCGGCAG TGTCGTACTG
ACGGATTTTT CGGAAAATTA 201 TAAAAAACAG CGGCAATCGT TTGAAGCATT
CTTTTTAAGC GGGGAAGAGG 251 CACAACATCA GGAAAAAGAG GAAAAGAAAA
AGGAAAAGGC GGAAGCCAAA 301 GCAGAGAAAA A.CGTTTGAA GGAGGGTGGG
GAGAAATCTG CCGAAACGCA 351 nAAATCACGC CTTTTTGTGT TGGANNNNNN
NNNNNNNNNN NNNNNNNNNN 401 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
NNNNNNNNNN NNNNNNNNNN 451 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
NNNNNNNNNN NNNNNNNNNN 501 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
NNNNNNNNNN NNNNNNNNNN 551 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
NNGCGAGCGG CGGTTATATG 601 ATGGCGTGTG TGGCGGATAA AATTGCTTCC
GCTCCGTTTG CGATTGTCGG 651 TTCGGTGGGT GTGGTGGCGG AAGTACCGAA
TATCCACCGC CTGTTGAAAA 701 AACATGATAT TGATGTGGAT GTGATGACGG
CGGGCGAATT TAAGCGCACG 751 GTTACTTTTA TGGGTGAAAA TACGGAAAAG
GGCAAACAGA AATTCCGACA 801 GGAACTGGAG GAAACGCATC AGTTGTTCAA
GCAGTTTGTC AGCGAGAACC 851 GCCCTCAATT GGATATTGAG GAAGTGGCAA
CGGGCGAGCA TTGGTTCGGT 901 CGGCAGGCGT TGGCGTTGAA CTTGATTGAC
GAGATTTCGA CCAGTGATGA 951 TTTGTTGTTG AAAGCGTTTG AAAACAAACA
GGTTATCGAA GTGAAATATC 1001 AGGAGAAGCA AAGCCTGATC CAGCGCATTG
GTTTGCAGGC GGAAGCTTCT 1051 GTTGAAAAGT TGTTTGCCAA ACTTGTCAAC
CGGCGGGCGG ATGTGATGTA 1101 G
This corresponds to the amino acid sequence <SEQ ID 22; ORF
005>:
TABLE-US-00129 m005.pep 1 MDNIDMFMPE QEEIQSMWKE ILLNYGIFLL
ELLTVFGAIA LIVLAIVQSK 51 KQSXSGSVVL TDFSENYKKQ RQSFEAFFLS
GEEAQHQEKE EKKKEKAEAK 101 AEKXRLKEGG EKSAETXKSR LFVLXXXXXX
XXXXXXXXXX XXXXXXXXXX 151 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXASGGYM 201 MACVADKIAS APFAIVGSVG VVAEVPNIHR
LLKKHDIDVD VMTAGEFKRT 251 VTFMGENTEK GKQKFRQELE ETHQLFKQFV
SENRPQLDIE EVATGEHWFG 301 RQALALNLID EISTSDDLLL KAFENKQVIE
VKYQEKQSLI QRIGLQAEAS 351 VEKLFAKLVN RRADVM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 23>:
TABLE-US-00130 a005.seq 1 ATGGACAATA TTGACATGTT CATGCCTGAA
CAAGAGGAAA TCCAATCAAT 51 GTGGAAAGAA ATTTTACTGA ATTACGGTAT
TTTCCTGCTC GAACTGCTTA 101 CCGTGTTCGG CGCAATTGCG CTGATTGTGT
TGGCTATCGT ACAGAGTAAG 151 AAACAGTCGG AAAGCGGCAG TGTCGTACTG
ACGGATTTTT CGGAAAATTA 201 TAAAAAACAG CGGCAATCGT TTGAAGCATT
CTTTTTAAGC GGGGAAGAGG 251 CAAAACATCA GGAAAAAGAG GAAAAGAAAA
AGGAAAAGGC GGAAGCCAAA 301 GCAGAGAAAA AGCGTTTGAA GGAGGGTGGG
GAGAAATCTT CCGAAACGCA 351 AAAATCCCGC CTTTTTGTGT TGGATTTTGA
CGGCGATTTG TATGCACACG 401 CCGTAGAATC CTTGCGTCAT GAGATTACGG
CGGTGCTTTT GATTGCCAAG 451 CCTGAAGATG AGGTTCTGCT TAGATTGGAA
AGTCCGGGCG GCGTGGTTCA 501 CGGTTACGGT TTGGCGGCTT CGCAGCTTAG
GCGTTTGCGC GAACGCAATA 551 TTCCGCTGAC CGTCGCCGTC GATAAGGTGG
CGGCGAGCGG TGGTTATATG 601 ATGGCGTGTG TGGCGGATAA AATTGTTTCC
GCTCCGTTTG CGATTGTCGG 651 TTCGGTGGGT GTTGTAGCGG AAGTACCGAA
TATCCACCGC CTGTTGAAAA 701 AACATGATAT TGATGTGGAT GTGATGACGG
CGGGCGAATT TAAGCGCACG 751 GTTACTTTTA TGGGTGAAAA TACGGAAAAG
GGCAAACAGA AATTCCGACA 801 GGAACTGGAG GAAACGCATC AGTTGTTCAA
GCAGTTTGTC AGCGAGAACC 851 GCCCTCAATT GGATATTGAG GAAGTGGCAA
CGGGCGAGCA TTGGTTCGGT 901 CGGCAGGCGT TGGCGTTGAA CTTGATTGAC
GAGATTTCGA CCAGTGATGA 951 TTTGTTGTTG AAAGCGTTTG AAAACAAACA
GGTTATCGAA GTGAAATATC 1001 AGGAGAAGCA AAGCCTGATC CAGCGCATTG
GTTTGCAGGC GGAAGCTTCT 1051 GTTGAAAAGT TGTTTGCCAA ACTTGTCAAC
CGGCGGGCGG ATGTGATGTA 1101 G
This corresponds to the amino acid sequence <SEQ ID 24; ORF
005.a>:
TABLE-US-00131 a005.pep 1 MDNIDMFMPE QEEIQSMWKE ILLNYGIFLL
ELLTVFGAIA LIVLAIVQSK 51 KQSESGSVVL TDFSENYKKQ RQSFEAFFLS
GEEAKHQEKE EKKKEKAEAK 101 AEKKRLKEGG EKSSETQKSR LFVLDFDGDL
YAHAVESLRH EITAVLLIAK 151 PEDEVLLRLE SPGGVVHGYG LAASQLRRLR
ERNIPLTVAV DKVAASGGYM 201 MACVADKIVS APFAIVGSVG VVAEVPNIHR
LLKKHDIDVD VMTAGEFKRT 251 VTFMGENTEK GKQKFRQELE ETHQLFKQFV
SENRPQLDIE EVATGEHWFG 301 RQALALNLID EISTSDDLLL KAFENKQVIE
VKYQEKQSLI QRIGLQAEAS 351 VEKLFAKLVN RRADVM* m005/a005 79.2%
identity over a 366 aa overlap 10 20 30 40 50 60 m005.pep
MDNIDMFMPEQEEIQSMWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSXSGSVVL
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| a005
MDNIDMFMPEQEEIQSMWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL 10 20
30 40 50 60 70 80 90 100 110 120 m005.pep
TDFSENYKKQRQSFEAFFLSGEEAQHQEKEEKKKEKAEAKAEKXRLKEGGEKSAETXKSR
||||||||||||||||||||||||:|||||||||||||||||| |||||||||:|| ||| a005
TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQKSR 70 80
90 100 110 120 130 140 150 160 170 180 m005.pep
LFVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |||| :
a005 LFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQLRRLR
130 140 150 160 170 180 190 200 210 220 230 240 m005.pep
XXXXXXXXXXXXXXASGGYMMACVADKIASAPFAIVGSVGVVAEVPNIHRLLKKHDIDVD :
||||||||||||||:||||||||||||||||||||||||||||||| a005
ERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKKHDIDVD 190
200 210 220 230 240 250 260 270 280 290 300 m005.pep
VMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEVATGEHWFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a005
VMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEVATGEHWFG 250
260 270 280 290 300 310 320 330 340 350 360 m005.pep
RQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEASVEKLFAKLVN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a005
RQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEASVEKLFAKLVN 310
320 330 340 350 360 m005.pep RRADVMX ||||||| a005 RRADVMX
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 005
shows 77.0% identity over a 366 aa overlap with a predicted ORF
(ORF 005.ng) from N. gonorrhoeae:
TABLE-US-00132 m005/g005 10 20 30 40 50 m005.pep
MDNIDMFMPEQEEIQSMWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSXSGSV
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| g005
MGMDNIDMFMPEQEEIQSMWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSV 10 20
30 40 50 60 60 70 80 90 100 110 m005.pep
VLTDFSENYKKQRQSFEAFFLSGEEAQHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETXK
|||||||||||||||||:|||| ||::||||:|||||||||||||||||||||||||| | g005
VLTDFSENYKKQRQSFETFFLSEEETKHQEKKEKKKEKAEAKAEKKRLKEGGEKSAETQK 70 80
90 100 110 120 120 130 140 150 160 170 m005.pep
SRLFVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ||||||
: g005 SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQLRR
130 140 150 160 170 180 180 190 200 210 220 230 m005.pep
XXXXXXXXXXXXXXXXASGGYMMACVADKIASAPFAIVGSVGVVAEVPNIHRLLKKHDID :
||||||||||||||:|||||::|||||||||||||||||||||| g005
LRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSVGVVAEVPNIHRLLKKHDID 190
200 210 220 230 240 240 250 260 270 280 290 m005.pep
VDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEVATGEHW
||||||||||||||||||||||||||||||||||||||||||||||| ||||::|||||| g005
VDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPGLDIEKIATGEHW 250
260 270 280 290 300 300 310 320 330 340 350 m005.pep
FGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEASVEKLFAKL
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| g005
FGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKRSLIQRIGLQAEASVEKLFAKL 310
320 330 340 350 360 360 m005.pep VNRRADVMX ||||||||| g005
VNRRADVMX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 25>:
TABLE-US-00133 g006.seq 1 ATGCTGCTGG TGCTggaatt ttggttCGGc
gtGtCGGCGG TGGGCatact 51 tgCGTTGTTT TTATGGCttt TGCCACGTTT
TGCCGCCATC AGCGAAAACC 101 TGTATTTCCG CCTGAACAAC AGCTTGGAAC
gcgACAACCA CTTTATCCGA 151 AAAGGCGACG AGCGGCAGCT GTACCGCCAT
TACGGACTGG TTTCGCGCCT 201 GCGTGTGCTG ATTTCCAACC GCGAAGCCTT
CGGCTATCTC TGCGTCGGCG 251 CGGCGATGGG TATTTTGTTC GGCTTTGCTT
TTGTGATGAT GACGCTCAAA 301 GGCTACGGCA GCGCGGGGCA TATTTATTCG
GTCGGCACTT ATCTGTGGAT 351 GTTTGCCATG AGTTTGGACG ATGTGCCGCG
ATTGGTCGAA CAATATTCCA 401 ATTTGAAAGA CATCGGACAA CGGATAGAGT
GGTCGGAACG GAACATCAAA 451 GCCGGAACTT GA
This corresponds to the amino acid sequence <SEQ ID 26. ORF
006.ng>.
TABLE-US-00134 g006.pep 1 MLLVLEFWFG VSAVGILALF LWLLPRFAAI
SENLYFRLNN SLERDNHFIR 51 KGDERQLYRH YGLVSRLRVL ISNREAFGYL
CVGAAMGILF GFAFVMMTLK 101 GYGSAGHIYS VGTYLWMFAM SLDDVPRLVE
QYSNLKDIGQ RIEWSERNIK 151 AGT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 27>:
TABLE-US-00135 m006.seq 1 ATGCTGCTGG TGCTGGAATT TTGGGTCGGC
GTGTCGGCGG TGGGCATACT 51 TGCGTTGTTT TTATGGCTTT TGCCACGTTT
TGCCGCCATC AGCGAAAACC 101 TGTATTTCCG CCTGAACAAC AGCTTGGAAC
GCGACAACCA CTTTATCCGA 151 AAAGGCGACC GGCGGCAGCT GTACCGCCAT
TACGGACTGC TTGCGCGCCT 201 GCGTGTGCTG ATTTCCAACC GCGAAGCCTT
CGGCTATCTC TGCGTCGGCA 251 CGGCGATGGG TATTTTGTTC GGCTTTGCTT
TTGTGATGAT GACGCTCAAA 301 GGCTACAGCA GCGCGGGGCA TGTCTATTCG
GTCGGCACTT ATCTGTGGAT 351 GTTTGCCATG AGTTTGGACG ACGTGCCGCG
ATTGGTCGAA CAATATTCCA 401 ATTTGAAAGA CATCGGACAA CGGATAGAGT
GGTCGGAACG GAACATCAAA 451 GCCGGAACTTGA
This corresponds to the amino acid sequence <SEQ ID 28; ORF
006>:
TABLE-US-00136 m006.pep 1 MLLVLEFWVG VSAVGILALF LWLLPRFAAI
SENLYFRLNN SLERDNHFIR 51 KGDRRQLYRH YGLLARLRVL ISNREAFGYL
CVGTAMGILF GFAFVMMTLK 101 GYSSAGHVYS VGTYLWMFAM SLDDVPRLVE
QYSNLKDIGQ RIEWSERNIK 151 AGT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 29>:
TABLE-US-00137 a006.seq 1 ATGCTGCTGG TGCTGGAATT TTGGGTCGGC
GTGTCGGCGG TGGGCATACT 51 TGCGTTGTTT TTATGGCTTT TGCCACGTTT
TGCCGCCATC AGCGAAAACC 101 TGTATTTCCG CCTGAAGAAC AGCTTGGAAC
GCGACAACCA CTTTATCCGA 151 AAAGGCGACG AGCGGCAGCT GGACCGCCAT
TACGGACTGC TTGCGCGCCT 201 GCGTGTGCTG ATTTCCAACC GCGAAGCCTT
CGGCTATCTC TGCGTCGGCA 251 CGGCGATGGG TATTTTGTTC GGCTTTGCTT
TTGTGATGAT GACGCTCAAA 301 GGCTACAGCA GCGCGGGGCA TGTCTATTCG
GTCGGCACTT ATCTGTGGAT 351 GTTTGCCATA AGTTTGGACG ACGTGCCGCG
ATTGGTCGAA CAATATTCCA 401 ATTTGAAAGA CATCGGACAA CGGATAGAGT
GGTCGAAACG GAACATCAAA 451 GCCGGAACTT GA
This corresponds to the amino acid sequence <SEQ ID 30; ORF
006.a>:
TABLE-US-00138 a006.pep 1 MLLVLEFWVG VSAVGILALF LWLLPRFAAI
SENLYFRLKN SLERDNHFIR 51 KGDERQLDRH YGLLARLRVL ISNREAFGYL
CVGTAMGILF GFAFVMMTLK 101 GYSSAGHVYS VGTYLWMFAI SLDDVPRLVE
QYSNLKDIGQ RIEWSKRNIK 151 AGT* m006/a006 96.7% identity over a 153
aa overlap 10 20 30 40 50 60 m006.pep
MLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERDNHFIRKGDRRQLYRH
||||||||||||||||||||||||||||||||||||||:||||||||||||||:||| || a006
MLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLKNSLERDNHFIRKGDERQLDRH 10 20
30 40 50 60 70 80 90 100 110 120 m006.pep
YGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a006
YGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAI 70 80
90 100 110 120 130 140 150 m006.pep
SLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGTX
|||||||||||||||||||||||||:|||||||| a006
SLDDVPRLVEQYSNLKDIGQRIEWSKRNIKAGTX 130 140 150
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 006
shows 95.4% identity over a 153 aa overlap with a predicted ORF
(ORF 006.ng) from N. gonorrhoeae:
TABLE-US-00139 m006/g006 10 20 30 40 50 60 m006.pep
MLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERDNHFIRKGDRRQLYRH
|||||||| ||||||||||||||||||||||||||||||||||||||||||||:|||||| g006
MLLVLEFWFGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERDNHFIRKGDERQLYRH 10 20
30 40 50 60 70 80 90 100 110 120 m006.pep
YGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAM
|||::||||||||||||||||||:||||||||||||||||||:||||:|||||||||||| g006
YGLVSRLRVLISNREAFGYLCVGAAMGILFGFAFVMMTLKGYGSAGHIYSVGTYLWMFAM 70 80
90 100 110 120 130 140 150 m006.pep
SLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGTX
||||||||||||||||||||||||||||||||| g118
SLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGT 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 31>:
TABLE-US-00140 g006-1.seq 1 ATGTGGAAAA TGTTGAAACA CATAGCCAAA
ACCCACCGCA AGCGATTGAT 51 TGGCACATTT TCCCCGGTCG GACTGGAAAA
CCTTTTGATG CTGGGGTATC 101 CGGTGTTTGG CGGCTGGGCG ATTAATGCCG
TGATTGCGGG GAGGGTGTGG 151 CAGGCGTTGC TGTACGCTTT GGTTGTATTT
TTGATGTGGC TGGTCGGTGC 201 GGCACGGCGG ATTGCCGATA CGCGCACGTT
TACGCGGATT TATACCGAAA 251 TCGCCGTGCC GGTTGTGTTG GAACAACGGC
AGCGGCAAGT CCCGCATTCA 301 GCGGTAACTG CACGGGTTGC CCTGTCGCGT
GAATTTGTCA GCTTTTTTGA 351 AGAACACCTG CCGATTGCCG CGACATCCGT
CGTATCCATA TTCGGCGCGT 401 GCATCATGCT GCTGGTGCTG GAATTTTGGG
TCGGCGTGTC GGCGGTGGGC 451 ATACTTGCGT TGTTTTTATG GCTTTTGCCA
CGTTTTGCCG CCATCAGCGA 501 AAACCTGTAT TTCCGCCTGA ACAACAGCTT
GGAACGCGAC AACCACTTTA 551 TCCGAAAAGG CGACGAGCGG CAGCTGTACC
GCCATTACGG ACTGGTTTCG 601 CGCCTGCGTG TGCTGATTTC CAACCGCGAA
GCCTTCGGCT ATCTCTGCGT 651 CGGCGCGGCG ATGGGTATTT TGTTCGGCTT
TGCTTTTGTG ATGATGACGC 701 TCAAAGGCTA CGGCAGCGCG GGGCATATTT
ATTCGGTCGG CACTTATCTG 751 TGGATGTTTG CCATGAGTTT GGACGATGTG
CCGCGATTGG TCGAACAATA 801 TTCCAATTTG AAAGACATCG GACAACGGAT
AGAGTGGTCG GAACGGAACA 851 TCAAAGCCGG AACTTGA
This corresponds to the amino acid sequence <SEQ ID 32; ORF
006-1.ng>:
TABLE-US-00141 g006-1.pep 1 MWKMLKHIAK THRKRLIGTF SPVGLENLLM
LGYPVFGGWA INAVIAGRVW 51 QALLYALVVF LMWLVGAARR IADTRTFTRI
YTEIAVPVVL EQRQRQVPHS 101 AVTARVALSR EFVSFFEEHL PIAATSVVSI
FGACIMLLVL EFWVGVSAVG 151 ILALFLWLLP RFAAISENLY FRLNNSLERD
NHFIRKGDER QLYRHYGLVS 201 RLRVLISNRE AFGYLCVGAA MGILFGFAFV
MMTLKGYGSA GHIYSVGTYL 251 WMFAMSLDDV PRLVEQYSNL KDIGQRIEWS
ERNIKAGT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 33>:
TABLE-US-00142 m006-1.seq 1 ATGTGGAAAA TGTTGAAACA CATAGCCCAA
ACCCACCGCA AGCGATTGAT 51 TGGCACATTT TCCCTGGTCG GACTGGAAAA
CCTTTTGATG CTGGTGTATC 101 CGGTGTTTGG CGGCCGGGCG ATCAATGCCG
TGATTGCGGG GGAGGTGTGG 151 CAGGCGTTGC TGTACGCTTT GGTTGTGCTT
TTGATGTGGC TGGTCGGTGC 201 GGTGCGGCGG ATTGCCGATA CGCGCACGTT
TACGCGGATT TATACCGAAA 251 TCGCCGTGCC GGTCGTGTTG GAACAGCGGC
AGCGACAAGT CCCGCATTCG 301 GCGGTAACTG CGCGGGTTGC CCTGTCGCGT
GAGTTTGTCA GCTTTTTTGA 351 AGAACACCTG CCGATTGCCG CGACATCCGT
CGTATCCATA TTCGGCGCGT 401 GCATCATGCT GCTGGTGCTG GAATTTTGGG
TCGGCGTGTC GGCGGTGGGC 451 ATACTTGCGT TGTTTTTATG GCTTTTGCCA
CGTTTTGCCG CCATCAGCGA 501 AAACCTGTAT TTCCGCCTGA ACAACAGCTT
GGAACGCGAC AACCACTTTA 551 TCCGAAAAGG CGACCGGCGG CAGCTGTACC
GCCATTACGG ACTGCTTGCG 601 CGCCTGCGTG TGCTGATTTC CAACCGCGAA
GCCTTCGGCT ATCTCTGCGT 651 CGGCACGGCG ATGGGTATTT TGTTCGGCTT
TGCTTTTGTG ATGATGACGC 701 TCAAAGGCTA CAGCAGCGCG GGGCATGTCT
ATTCGGTCGG CACTTATCTG 751 TGGATGTTTG CCATGAGTTT GGACGACGTG
CCGCGATTGG TCGAACAATA 801 TTCCAATTTG AAAGACATCG GACAACGGAT
AGAGTGGTCG GAACGGAACA 851 TCAAAGCCGG AACTTGA
This corresponds to the amino acid sequence <SEQ ID 34; ORF
006-1>:
TABLE-US-00143 m006-1.pep 1 MWKMLKHIAQ THRKRLIGTF SLVGLENLLM
LVYPVFGGRA INAVIAGEVW 51 QALLYALVVL LMWLVGAVRR IADTRTFTRI
YTEIAVPVVL EQRQRQVPHS 101 AVTARVALSR EFVSFFEEHL PIAATSVVSI
FGACIMLLVL EFWVGVSAVG 151 ILALFLWLLP RFAAISENLY FRLNNSLERD
NHFIRKGDRR QLYRHYGLLA 201 RLRVLISNRE AFGYLCVGTA MGILFGFAFV
MMTLKGYSSA GHVYSVGTYL 251 WMFAMSLDDV PRLVEQYSNL KDIGQRIEWS
ERNIKAGT* m006-1/g006-1 95.5% identity in 288 aa overlap 10 20 30
40 50 60 m006-1.pep
MWKMLKHIAQTHRKRLIGTFSLVGLENLLMLVYPVFGGRAINAVIAGEVWQALLYALVVL
|||||||||:||||||||||| ||||||||| |||||| ||||||||:|||||||||||: g006-1
MWKMLKHIAKTHRKRLIGTFSPVGLENLLMLGYPVFGGWAINAVIAGRVWQALLYALVVF 10 20
30 40 50 60 70 80 90 100 110 120 m006-1.pep
LMWLVGAVRRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVTARVALSREFVSFFEEHL
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| g006-1
LMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVTARVALSREFVSFFEEHL 70 80
90 100 110 120 130 140 150 160 170 180 m006-1.pep
PIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g006-1
PIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERD 130
140 150 160 170 180 190 200 210 220 230 240 m006-1.pep
NHFIRKGDRRQLYRHYGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSA
||||||||:|||||||||::||||||||||||||||||:||||||||||||||||||:|| g006-1
NHFIRKGDERQLYRHYGLVSRLRVLISNREAFGYLCVGAAMGILFGFAFVMMTLKGYGSA 190
200 210 220 230 240 250 260 270 280 289 m006-1.pep
GHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGTX
||:|||||||||||||||||||||||||||||||||||||||||||||| g006-1
GHIYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGTX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 35>:
TABLE-US-00144 a006-1.seq (partial) 1 ..AGCCAAAACC ACCGCAAGCG
ATTGATTGGC ACATTTTTTC TGGTCGGACT 51 GGAAAACCTT TTGATGCTGG
TGTATCCGGT GTTTGGCGGC TGGGCGATTA 101 ATGCCGTGAT TGCGGGGCAG
GCGTGGCAGG CGTTGCTGTA CGCTTTGGTT 151 GTGCTTTTGA TGTGGCTGGT
CGGTGCGGCG CGGCGGATTG CCGATACGCG 201 CACGTTTACG CGGATTTATA
CCGAAATCGC CGTGCCGGTT GTGTTGGAAC 251 AGCGGCAGCG GCAAGTCCCG
CATTCGGCGG TAACTGCGCG GGTTGCCCTG 301 TCGCGTGAGT TTGTCAGCTT
TTTTGAAGAA CACCTGCCGA TTGCCGCGAC 351 ATCCGTCGTA TCCATATTCG
GCGCGTGCAT CATGCTGCTG GTGCTGGAAT 401 TTTGGGTCGG CGTGTCGGCG
GTGGGCATAC TTGCGTTGTT TTTATGGCTT 451 TTGCCACGTT TTGCCGCCAT
CAGCGAAAAC CTGTATTTCC GCCTGAAGAA 501 CAGCTTGGAA CGCGACAACC
ACTTTATCCG AAAAGGCGAC GAGCGGCAGC 551 TGGACCGCCA TTACGGACTG
CTTGCGCGCC TGCGTGTGCT GATTTCCAAC 601 CGCGAAGCCT TCGGCTATCT
CTGCGTCGGC ACGGCGATGG GTATTTTGTT 651 CGGCTTTGCT TTTGTGATGA
TGACGCTCAA AGGCTACAGC AGCGCGGGGC 701 ATGTCTATTC GGTCGGCACT
TATCTGTGGA TGTTTGCCAT AAGTTTGGAC 751 GACGTGCCGC GATTGGTCGA
ACAATATTCC AATTTGAAAG ACATCGGACA 801 ACGGATAGAG TGGTCGAAAC
GGAACATCAA AGCCGGAACT TGA
This corresponds to the amino acid sequence <SEQ ID 36; ORF
006-1.a>:
TABLE-US-00145 a006-1.pep (partial) 1 ..SQNHRKRLIG TFFLVGLENL
LMLVYPVFGG WAINAVIAGQ AWQALLYALV 51 VLLMWLVGAA RRIADTRTFT
RIYTEIAVPV VLEQRQRQVP HSAVTARVAL 101 SREFVSFFEE HLPIAATSVV
SIFGACIMLL VLEFWVGVSA VGILALFLWL 151 LPRFAAISEN LYFRLKNSLE
RDNHFIRKGD ERQLDRHYGL LARLRVLISN 201 REAFGYLCVG TAMGILFGFA
FVMMTLKGYS SAGHVYSVGT YLWMFAISLD 251 DVPRLVEQYS NLKDIGQRIE
WSKRNIKAGT * a006-1/m006-1 95.7% identity in 280 aa overlap 10 20
30 40 50 a006-1.pep
SQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVIAGQAWQALLYALVVL :|:|||||||||
||||||||||||||||| ||||||||::||||||||||| m006-1
MWKMLKHIAQTHRKRLIGTFSLVGLENLLMLVYPVFGGRAINAVIAGEVWQALLYALVVL 10 20
30 40 50 60 60 70 80 90 100 110 a006-1.pep
LMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVTARVALSREFVSFFEEHL
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| m006-1
LMWLVGAVRRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVTARVALSREFVSFFEEHL 70 80
90 100 110 120 120 130 140 150 160 170 a006-1.pep
PIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLKNSLERD
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| m006-1
PIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPRFAAISENLYFRLNNSLERD 130
140 150 160 170 180 180 190 200 210 220 230 a006-1.pep
NHFIRKGDERQLDRHYGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSA
||||||||:||| ||||||||||||||||||||||||||||||||||||||||||||||| m006-1
NHFIRKGDRRQLYRHYGLLARLRVLISNREAFGYLCVGTAMGILFGFAFVMMTLKGYSSA 190
200 210 220 230 240 240 250 260 270 280 a006-1.pep
GHVYSVGTYLWMFAISLDDVPRLVEQYSNLKDIGQRIEWSKRNIKAGTX
||||||||||||||:|||||||||||||||||||||||||:|||||||| m006-1
GHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRIEWSERNIKAGTX 250 260 270
280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 37>:
TABLE-US-00146 g007.seq 1 atgaACACAA CCCGACTGCC GACCGCCTTC
ATCTTGTGCT GCCTCTGcgC 51 CGCcGCTTCT GCCGccgaca acAGCatcat
gaCaAAAGGG CAAAAAGTGT 101 ACGAATCcAa ctGCATCGCC TGCCACGGCA
AGAAAGGGGA AGGGCGCGGC 151 ACTGCGtTTC CTccgctTTT CCggtcgGac
tgtattatga acaAACCGCa 201 cgTCCtgctg cacagcatgg tcaaaggcAt
cgacgggaca ttcaaagtgg 251 agcggcaaaa cctacgacgg atttatgCcc
gcaaccgcca tcagcgATGC 301 GGACATTGCC GCCGTCGCCA CTTATATCAT
GAACGCCTTT GA
This corresponds to the amino acid sequence <SEQ ID 38; ORF
007.ng>:
TABLE-US-00147 g007.pep 1 MNTTRLPTAF ILCCLCAAAS AADNSIMTKG
QKVYESNCIA CHGKKGEGRG 51 TAFPPLFRSD CIMNKPHVLL HSMVKGIDGT
FKVERQNLRR IYARNRHQRC 101 GHCRRRHLYH ERL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 39>:
TABLE-US-00148 m007.seq 1 ATGAACACAA CCCGACTGCC GACCGCCCTC
GTCTTGGGCT GCTTCTGCGC 51 CGCCGCTTCT GCCGCCGACA ACAGCATCAT
GACAAAAGGG CAAAAAGTGT 101 ACGAATCCAA CTGCGTCGCC TGCCACGGCA
AAAAGGGCGA AGGCCGCGGA 151 ACCATGTTTC CGCCGCTCTA CCGCTCCGAC
TTCATCATGA AAAAACCGCA 201 GGTGCTGCTG CACAGCATGG TCAAAGGCAT
CAACGGTACA ATCAAAGTC. 251 AACGGCAAAA CCTACAACGG ATTCATGCCC
GCAACCGCCA TCAGCGATGC 301 GGACATTGCC GCCGTCGCCA CTTATATCAT
GAACGCCTTT GA
This corresponds to the amino acid sequence <SEQ ID 40; ORF
007>:
TABLE-US-00149 m007.pep 1 MNTTRLPTAL VLGCFCAAAS AADNSIMTKG
QKVYESNCVA CHGKKGEGRG 51 TMFPPLYRSD FIMKKPQVLL HSMVKGINGT
IKVXRQNLQR IHARNRHQRC 101 GHCRRRHLYH ERL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 41>:
TABLE-US-00150 a007.seq 1 ATGAACACAA CCCGACTGCC GACCGCCCTC
GTCTTGGGCT GCCTCTGCGC 51 CGCCGCTTCT GCCGCCGACA ACAGCATCAT
GACAAAAGGG CAAAAAGTGT 101 ACGAATCCAA CTGCGTCGCC TGCCACGGCA
AAAAGGGCGA AGGCCGCGGA 151 ACCATGTTTC CGCCGCTCTA CCGCTCCGAC
TTCATCATGA AAAAACCGCA 201 GGTGCTGCTG CACAGCATGG TCAAAGGCAT
CAACGGTACA ATCAAAGTC. 251 AACGGCAAAA CCTACAACGG ATTCATGCCC
GCCACTGCCA TCAGCGATGC 301 GGACATTGCC GCCGTCGCCA CTTATATCAT
GAACGCCTTT GA
This corresponds to the amino acid sequence <SEQ ID 42; ORF
007.a>:
TABLE-US-00151 a007.pep 1 MNTTRLPTAL VLGCLCAAAS AADNSIMTKG
QKVYESNCVA CHGKKGEGRG 51 TMFPPLYRSD FIMKKPQVLL HSMVKGINGT
IKVXRQNLQR IHARHCHQRC 101 GHCRRRHLYH ERL* m007/a007 97.3% identity
over a 113 aa overlap 10 20 30 40 50 60 m007.pep
MNTTRLPTALVLGCFCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| a007
MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD 10 20
30 40 50 60 70 80 90 100 110 m007.pep
FIMKKPQVLLHSMVKGINGTIKVXRQNLQRIHARNRHQRCGHCRRRHLYHERLX
||||||||||||||||||||||||||||||||||: |||||||||||||||||| a007
FIMKKPQVLLHSMVKGINGTIKVXRQNLQRIHARHCHQRCGHCRRRHLYHERLX 70 80 90 100
110
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 007
shows 86.7% identity over a 113 aa overlap with a predicted ORF
(ORF 007.ng) from N. gonorrhoeae:
TABLE-US-00152 m007/g007 10 20 30 40 50 60 m007.pep
MNTTRLPTALVLGCFCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD
|||||||||::| |:|||||||||||||||||||||||:|||||||||||| ||||:||| g007
MNTTRLPTAFILCCLCAAASAADNSIMTKGQKVYESNCIACHGKKGEGRGTAFPPLFRSD 10 20
30 40 50 60 70 80 90 100 110 m007.pep
FIMKKPQVLLHSMVKGINGTIKVXRQNLQRIHARNRHQRCGHCRRRHLYHERLX
||:||:||||||||||:||:|| ||||:||:||||||||||||||||||||| g007
CIMNKPHVLLHSMVKGIDGTFKVERQNLRRIYARNRHQRCGHCRRRHLYHERL 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 43>:
TABLE-US-00153 g007-1.seq (partial) 1 ATGAACACAA CCCGACTGCC
GACCGCCTTC ATCTTGTGCT GCCTCTGCGC 51 CGCCGCTTCT GCCGCCGACA
ACAGCATCAT GACAAAAGGG CAAAAAGTGT 101 ACGAATCCAA CTGCATCGCC
TGCCACGGCA AGAAAGGGGA AGGGCGCGGC 151 ACTGCGTTTC CTCCGCTTTT
CCGGTCGGAC TATATTATGA ACAAACCGCA 201 CGTCCTGCTG CACAGCATGG
TCAAAGGCAT CAACGGTACA ATCAAAGTCA 251 ACGGCAAAAC CTACAACGGA
TTCATGCCCG CAACCGCCAT CAGCGATGCG 301 GACATTGCCG CCGTCGCCAC
TTATATCATG AACGCCTTTG ACAACGGCGG 351 CGGAAGCGTT ACCGAAAAAG
ACGTAAAACA GGCAAAAGGC AAAAAAAAC.
This corresponds to the amino acid sequence <SEQ ID 44; ORF
007-1.ng>:
TABLE-US-00154 g007-1.pep (partial) 1 MNTTRLPTAF ILCCLCAAAS
AADNSIMTKG QKVYESNCIA CHGKKGEGRG 51 TAFPPLFRSD YIMNKPHVLL
HSMVKGINGT IKVNGKTYNG FMPATAISDA 101 DIAAVATYIM NAFDNGGGSV
TEKDVKQAKG KKN...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 45>:
TABLE-US-00155 m007-1.seq 1 ATGAACACAA CCCGACTGCC GACCGCCCTC
GTCTTGGGCT GCTTCTGCGC 51 CGCCGCTTCT GCCGCCGACA ACAGCATCAT
GACAAAAGGG CAAAAAGTGT 101 ACGAATCCAA CTGCGTCGCC TGCCACGGCA
AAAAGGGCGA AGGCCGCGGA 151 ACCATGTTTC CGCCGCTCTA CCGCTCCGAC
TTCATCATGA AAAAACCGCA 201 GGTGCTGCTG CACAGCATGG TCAAAGGCAT
CAACGGTACA ATCAAAGTCA 251 ACGGCAAAAC CTACAACGGA TTCATGCCCG
CAACCGCCAT CAGCGATGCG 301 GACATTGCCG CCGTCGCCAC TTATATCATG
AACGCCTTTG ACAACGGCGG 351 CGGAAGCGTT ACCGAAAAAG ACGTAAAACA
GGCAAAAAGC AAAAAAAACT 401 AA
This corresponds to the amino acid sequence <SEQ ID 46; ORF
007-1>
TABLE-US-00156 m007-1.pep 1 MNTTRLPTAL VLGCFCAAAS AADNSIMTKG
QKVYESNCVA CHGKKGEGRG 51 TMFPPLYRSD FIMKKPQVLL HSMVKGINGT
IKVNGKTYNG FMPATAISDA 101 DIAAVATYIM NAFDNGGGSV TEKDVKQAKS KKN*
m007-1/g007-1 91.7% identity in 133 aa overlap 10 20 30 40 50 60
m007-1.pep
MNTTRLPTALVLGCFCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD
|||||||||::| |:|||||||||||||||||||||||:|||||||||||| ||||:||| g007-1
MNTTRLPTAFILCCLCAAASAADNSIMTKGQKVYESNCIACHGKKGEGRGTAFPPLFRSD 10 20
30 40 50 60 70 80 90 100 110 120 m007-1.pep
FIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADIAAVATYIMNAFDNGGGSV
:||:||:||||||||||||||||||||||||||||||||||||||||||||||||||||| g007-1
YIMNKPHVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADIAAVATYIMNAFDNGGGSV 70 80
90 100 110 120 130 m007-1.pep TEKDVKQAKSKKNX |||||||||:||| g007-1
TEKDVKQAKGKKN 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 47>:
TABLE-US-00157 a007-1.seq (partial) 1 ATGAACACAA CCCGACTGCC
GACCGCCCTC GTCTTGGGCT GCCTCTGCGC 51 CGCCGCTTCT GCCGCCGACA
ACAGCATCAT GACAAAAGGG CAAAAAGTGT 101 ACGAATCCAA CTGCGTCGCC
TGCCACGGCA AAAAGGGCGA AGGCCGCGGA 151 ACCATGTTTC CGCCGCTCTA
CCGCTCCGAC TTCATCATGA AAAAACCGCA 201 GGTGCTGCTG CACAGCATGG
TCAAAGGCAT CAACGGTACA ATCAAAGTCA 251 ACGGCAAAAC CTACAACGGA
TTCATGCCCG CCACTGCCAT CAGCGATGCG 301 GACATTGCCG CCGTCGCCAC
TTATATCATG AACGCCTTTG ACAACGGCGG 351 CGGAAGCGTT ACCGAAAAAG
ACGTAAAACA GGCAAAAAAC AAAAAA..
This corresponds to the amino acid sequence <SEQ ID 48; ORF
007-1.a>:
TABLE-US-00158 a007-1.pep (partial) 1 MNTTRLPTAL VLGCLCAAAS
AADNSIMTKG QKVYESNCVA CHGKKGEGRG 51 TMFPPLYRSD FIMKKPQVLL
HSMVKGINGT IKVNGKTYNG FMPATAISDA 101 DIAAVATYIM NAFDNGGGSV
TEKDVKQAKN KK.. m007-1/a007-1 98.5% identity in 132 aa overlap 10
20 30 40 50 60 m007-1.pep
MNTTRLPTALVLGCFCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| a007-1
MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGKKGEGRGTMFPPLYRSD 10 20
30 40 50 60 70 80 90 100 110 120 m007-1.pep
FIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADIAAVATYIMNAFDNGGGSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a007-1
FIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADIAAVATYIMNAFDNGGGSV 70 80
90 100 110 120 130 m007-1.pep TEKDVKQAKSKKNX |||||||||:|| a007-1
TEKDVKQAKNKK 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 49>:
TABLE-US-00159 g008.seq 1 ATGAACAACA GACATTTTGC CGTCAtcgCC
TTGGGCAGCA ACCTTGACAA 51 CCCCGCACAA CAAATacgcg gcgcattaga
cgcgctctcg tcccatcctg 101 acatccggct tgaaCaggtt tcctcactgt
aTatgaccgc acctgtcggt 151 tacgAcaaTC agcccgATTT CATCaatgcc
gTCTgcaccg TTTCCACCAC 201 CtTGGACGGC ATTGcccTGC TTGCCgaACT
CAAccgTATC GAAGCCGATT 251 TCGGACGCGA aCGCAGTTTC CGCAATGCAC
CGCGCACATT GGATTTGGAC 301 ATTATCGACT TTGACGGCAT CTCCAGCGAC
GACCCCCGCC TTACCCTGCC 351 GCATCCGCGC GCGCACGAAC GCAGTTTCGT
CATACGCCCT TTGGCAGAAA 401 TCCTCCCTGA TTTTATTTTG GGAAAATACG
GAAAGGTTGT CGAATTGTCA 451 AAACGGCTGG GCAATCAAGG CATCCGTCTT
TTACCGGACA GGTAA
This corresponds to the amino acid sequence <SEQ ID 50; ORF
008.ng>:
TABLE-US-00160 g008.pep 1 MNNRHFAVIA LGSNLDNPAQ QIRGALDALS
SHPDIRLEQV SSLYMTAPVG 51 YDNQPDFINA VCTVSTTLDG IALLAELNRI
EADFGRERSF RNAPRTLDLD 101 IIDFDGISSD DPRLTLPHPR AHERSFVIRP
LAEILPDFIL GKYGKVVELS 151 KRLGNQGIRL LPDR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 51>:
TABLE-US-00161 m008.seq 1 ATGAACAACA GACATTTTGC CGTCATCGCC
CTGGGCAGTA ATCTTGAAAA 51 CCCTGCTCAA CAGGTACGCG CCGCATTGGA
CACGCTGTCG TCCCATCCTG 101 ACATCCGTCT TAAACAGGCT TCCTCACTGT
ATATGACCGC GCCCGTCGGT 151 TACGACAATC AGCCCGATTT TGTCAATGCC
GTCTGCACCG TTTCCACCAC 201 TCTGGACGGC ATTGCCyTGC TTGCCGAACT
CAACCGTATC GAGGCTGATT 251 TCGGACGCGA ACGCAGCTTC CGCAACGCGC
CGCGCACATT GkATTTGGAC 301 ATTATCGACT TTGACGGCAT CTCCAGCGAC
GACACsCGAC TcACCtTGCC 351 GCATCCGCGC GCGCACGAAC GCAGTTTCGT
CATCCGCCCT TTGGCAGAAA 401 TCCTCCCTGA TTTTGTTTTA GGAAAACACG
GAAAGGTTGC CGAATTGTCA 451 AAACGGyTGG GCAATCAAGG TATCCGTCTT
TTACCGGACA GGTAATT
This corresponds to the amino acid sequence <SEQ ID 52; ORF
008>:
TABLE-US-00162 m008.pep 1 MNNRHFAVIA LGSNLENPAQ QVRAALDTLS
SHPDIRLKQA SSLYMTAPVG 51 YDNQPDFVNA VCTVSTTLDG IALLAELNRI
EADFGRERSF RNAPRTLXLD 101 IIDFDGISSD DTRLTLPHPR AHERSFVIRP
LAEILPDFVL GKHGKVAELS 151 KRLGNQGIRL LPDR*
The following partial DNA sequence was identified in N.
meningitidis<SEQ ID 53>:
TABLE-US-00163 a008.seq 1 ATGAACAACA GACATTTTGC CGTCATCGCC
CTGGGCAGTA ATCTTGAAAA 51 CCCTGCCCAA CAGGTACGCG CCGCATTGGA
CACGCTGTCG TCCCATCCTG 101 ACATCCGTCT TAAACAGGCT TCCTCACTGT
ATATGACCGC GCCCGTCGGT 151 TACGACAATC AGCCCGATTT CGTCAATGCC
GTCTGCACCG TTTCCACCAC 201 CTTGGACGGC ATTGCCCTGC TTGCCGAACT
CAACCGTATC GAAGCCGATT 251 TCGGACGCGA ACGCAGCTTC CGCAACGCGC
CGCGCACATT GGATTTGGAC 301 ATTATCGACT TTGACGGCAT CTCCAGCGAC
GACCCCCGAC TCACCCTGCC 351 GCATCCGCGC GCGCACGAAC GCAGTTTCGT
CATACGCCCT TTGGCAGAAA 401 TCCTCCCTGA TTTTATTTTG GGAAAACACG
GAAAGGTTGC CGAATTGTCA 451 AAACGGCTGG GCAATCAAGG CATCCGTCTT
TTACCGGATA AGTAA
This corresponds to the amino acid sequence <SEQ ID 54; ORF
008.a>:
TABLE-US-00164 a008.pep 1 MNNRHFAVIA LGSNLENPAQ QVRAALDTLS
SHPDIRLKQA SSLYMTAPVG 51 YDNQPDFVNA VCTVSTTLDG IALLAELNRI
EADFGRERSF RNAPRTLDLD 101 IIDFDGISSD DPRLTLPHPR AHERSFVIRP
LAEILPDFIL GKHGKVAELS 151 KRLGNQGIRL LPDK* m008/a008 97.6% identity
over a 164 aa overlap 10 20 30 40 50 60 m008.pep
MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLYMTAPVGYDNQPDFVNA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a008
MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLYMTAPVGYDNQPDFVNA 10 20
30 40 50 60 70 80 90 100 110 120 m008.pep
VCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLXLDIIDFDGISSDDTRLTLPHPR
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| a008
VCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDIIDFDGISSDDPRLTLPHPR 70 80
90 100 110 120 130 140 150 160 m008.pep
AHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRLLPDRX
||||||||||||||||||:||||||||||||||||||||||||:| a008
AHERSFVIRPLAEILPDFILGKHGKVAELSKRLGNQGIRLLPDKX 130 140 150 160
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 008
shows 92.7% identity over a 164 aa overlap with a predicted ORF
(ORF008.ng) from N. gonorrhoeae:
TABLE-US-00165 m008/g008 10 20 30 40 50 60 m008.pep
MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLYMTAPVGYDNQPDFVNA
|||||||||||||||:|||||:|:|||:|||||||||:|:|||||||||||||||||:|| g008
MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQVSSLYMTAPVGYDNQPDFINA 10 20
30 40 50 60 70 80 90 100 110 120 m008.pep
VCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLXLDIIDFDGISSDDTRLTLPHPR
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| g008
VCIVSTILDGIALLAELNRIEADFGRERSFRNAPRILDLDIIDFDGISSDDPRLTLPHPR 70 80
90 100 110 120 130 140 150 160 m008.pep
AHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRLLPDRX
||||||||||||||||||:|||:|||:|||||||||||||||||| g008
AHERSFVIRPLAEILPDFILGKYGKVVELSKRLGNQGIRLLPDRX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 55>:
TABLE-US-00166 g009.seq 1 ATGCCCCGCG CTGCCGTAGC CTTTGAGCGT
CATCATCACA AAAGCAAAGC 51 CGAACAAAAT ACCCATCGCC GCGCCGACGC
AGAGATAGCC GAAGGCTTCG 101 CGGTTGGAAA TCAGCACACG CAGGCGCGAA
ACCAGTCCGT AATGGCGGTA 151 CAGCTGCCGC TCGTCGCCTT TTCGGATAAA
GTGGTTGTcg cGTTCCAAGC 201 TGTTGTTCAG GCGGAAATAC AGGTTTTCGC
TGATGGCGGC AAAACGTGGC 251 AaaaGCCATA A
This corresponds to the amino acid sequence <SEQ ID 56; ORF
009.ng>:
TABLE-US-00167 g009.pep 1 MPRAAVAFER HHHKSKAEQN THRRADAEIA
EGFAVGNQHT QARNQSVMAV 51 QLPLVAFSDK VVVAFQAVVQ AEIQVFADGG
KTWQKP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 57>:
TABLE-US-00168 m009.seq 1 ATGCCCCGCG CTGCTGTAGC CTTTGAGCGT
CATCATCACA AAAGCAAAGC 51 CGAACAAAAT ACCCATCGCC GTGCCGACGC
AGAGATAGCC GAAGGCTTCG 101 CGGTTGGAAA TCAGCACACG CAGGCGCGCA
AGCAGTCCGT AATGGCGGTA 151 CAGCTGCCGC CGGTCGCCTT TTCGGATAAA
GTGGTTGTCG CGTTCCAAGC 201 TGTTGTTCAG GCGGAAATAC AGGTTTTCGC
TGATGGCGGC AAAACGTGGC 251 AAAAGCCATA A
This corresponds to the amino acid sequence <SEQ ID 58; ORF
009>:
TABLE-US-00169 m009.pep 1 MPRAAVAFER HHHKSKAEQN THRRADAEIA
EGFAVGNQHT QARKQSVMAV 51 QLPPVAFSDK VVVAFQAVVQ AEIQVFADGG
KTWQKP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 009
shows 97.7% identity over a 86 aa overlap with a predicted ORF (ORF
009.ng) from N. gonorrhoeae:
TABLE-US-00170 m009/g009 10 20 30 40 50 60 m009.pep
MPRAAVAFERHHHKSKAEQNTHRRADAEIAEGFAVGNQHTQARKQSVMAVQLPPVAFSDK
|||||||||||||||||||||||||||||||||||||||||||:||||||||| |||||| g009
MPRAAVAFERHHHKSKAEQNTHRRADAEIAEGFAVGNQHTQARNQSVMAVQLPLVAFSDK 10 20
30 40 50 60 70 80 m009.pep VVVAFQAVVQAEIQVFADGGKTWQKPX
||||||||||||||||||||||||||| g009 VVVAFQAVVQAEIQVFADGGKTWQKPX 70
80
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 59>:
TABLE-US-00171 a009.seq 1 ATGCCCCGCG CTGCTGTAGC CTTTGAGCGT
CATCATCACA AAAGCAAAGC 51 CGAACAAAAT ACCCATCGCC GTGCCGACGC
AGAGATAGCC GAAGGCTTCG 101 CGGTTGGAAA TCAGCACACG CAGGCGCGCA
AGCAGTCCGT AATGGCGGTC 151 CAGCTGCCGC TCGTCGCCTT TTCGGATAAA
GTGGTTGTCG CGTTCCAAGC 201 TGTTCTTCAG GCGGAAATAC AGGTTTTCGC
TGATGGCGGC AAAACGTGGC 251 AAAAGCCATA A
This corresponds to the amino acid sequence <SEQ ID 60; ORF
009.a>:
TABLE-US-00172 a009.pep 1 MPRAAVAFER HHHKSKAEQN THRRADAEIA
EGFAVGNQHT QARKQSVMAV 51 QLPLVAFSDK VVVAFQAVLQ AEIQVFADGG KTWQKP*
m009/a009 97.7% identity over a 86 aa overlap 10 20 30 40 50 60
m009.pep
MPRAAVAFERHHHKSKAEQNTHRRADAEIAEGFAVGNQHTQARKQSVMAVQLPPVAFSDK
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| a009
MPRAAVAFERHHHKSKAEQNTHRRADAEIAEGFAVGNQHTQARKQSVMAVQLPLVAFSDK 10 20
30 40 50 60 70 80 m009.pep VVVAFQAVVQAEIQVFADGGKTWQKPX
||||||||:|||||||||||||||||| a009 VVVAFQAVLQAEIQVFADGGKTWQKPX 70
80
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 61>:
TABLE-US-00173 g010.seq 1 ATGGGTTTTC CTGTTCGCAA GTTTGATGCC
GTGATTGTCG GCGGTGGCGG 51 TGCAGGTTTA CGTGCAGCCC TCCAATTATC
CAAATCCGGT TTGAATTGTG 101 CCGTTTTGTC TAAAGTGTTC CCGACCCGCT
CGCATACCGT AGCGGCGCAG 151 GGCGGTATTT CCGCCTCTCT GGGTAATGTG
CAGGAGGACC GTTGGGACTG 201 GCACATGTAC GATACCGTGA AAGGTTCCGA
CTGGCTGGGC GACCAAGATG 251 CGATTGAGTT TATGTGTCGC GCTGCGCCTG
AAGCGGTGAT TGAGTTGGAA 301 CACATGGGTA TGCCTTTTGA CCGCGTTGAA
AGCGGCAAAA TTTATCAGCG 351 TCCTTTCGGC GGACATACTG CCGAACATGG
TAAACGTGCG GTAGAACGTG 401 CATGTGCGGT TGCCGACCGT ACCGGTCATG
CGATGTTGCA TACTTTGTAC 451 CAACAAAACG TCCGTGCCAA TACACAATTC
TTTGTGGAAT GGACGGCGCA 501 AGATTTGATT CGTGATGAAA ACGGCGATGT
CGTCGGCGTA ACCGCCATGG 551 AAATGGAAAC GGGCGAAGTT TATATTTTCC
ACGCCAAGGC CGTGATGTTT 601 GCTACCGGTG GCGGCGGTCG TATTTATGCT
TCTTCTACCA ATGCTTATAT 651 GAATACCGGT GACGGTTTGG GCATTTGCGC
CCGTGCGGGC ATTCCGTTGG 701 AAGATATGGA ATTCTGGCAA TTCCACCCGA
CCGGCGTGGC GGGTGCGGGC 751 GTGTTGATTA CCGAAGGCGT ACGCGGCGAG
GGCGGTATTC TGTTGAacgc 801 cgacggcgaA cgcTTTATGG AAcgctatgc
GCcgACCGta aAagaCTTGG 851 CTTCTCGCga cgtGGTTTCA CgcgcGatgG
CGatggaAAt ctatgaaggt 901 cgcggctgTG GtaaAAAcaA agaCCacgtC
TTACTGAAAA TCGACcAtAt 951 cggtGCAGAA AAAATTATGG AAAAACTGCC
GGGCATCCGC GAGATTTCCA 1001 TTCagtttgc cGGTATCGAT CCGATTAAAG
ACCCGATTcc ggttgTGCCG 1051 ACTACCCACT ATATGATGGG CGGCATTCcg
aCCAATTATC ACGGTGAAGT 1101 TGTTGTTCCG CAAGGCGACG AGTACGAAGT
ACCTGTAAAA GGCCTGTATG 1151 CCGCAGGTGA GTGCGCCTGT GCTTCCGTAC
ACGGTGCGAA CCGTTTGGGT 1201 ACGAACTCCC TGCTGGACTT GGTGGTGTTC
cgcccaaccc cccggtga
This corresponds to the amino acid sequence <SEQ ID 62; ORF
010.ng>:
TABLE-US-00174 g010.pep 1 MGFPVRKFDA VIVGGGGAGL RAALQLSKSG
LNCAVLSKVF PTRSHTVAAQ 51 GGISASLGNV QEDRWDWHMY DTVKGSDWLG
DQDAIEFMCR AAPEAVIELE 101 HMGMPFDRVE SGKIYQRPFG GHTAEHGKRA
VERACAVADR TGHAMLHTLY 151 QQNVRANTQF FVEWTAQDLI RDENGDVVGV
TAMEMETGEV YIFHAKAVMF 201 ATGGGGRIYA SSTNAYMNTG DGLGICARAG
IPLEDMEFWQ FHPTGVAGAG 251 VLITEGVRGE GGILLNADGE RFMERYAPTV
KDLASRDVVS RAMAMEIYEG 301 RGCGKNKDHV LLKIDHIGAE KIMEKLPGIR
EISIQFAGID PIKDPIPVVP 351 TTHYMMGGIP TNYHGEVVVP QGDEYEVPVK
GLYAAGECAC ASVHGANRLG 401 TNSLLDLVVF RPTPR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 63>:
TABLE-US-00175 m010.seq (PARTIAL) 1 ..nTCCAATTAT CCAAATCCGG
TCTGAATTGT GCCGTTTTGT CTAAAGTGTT 51 CCCGACCCGT TCGCATACCG
TAGCGGCGCA GGGCGGTATT TCCGCCTCTn 101 TGGGTAATGT GCAGGAAGAC
CGTTGGGACT GGCACATGTA CGATACCGTG 151 AAAGGTTCCG ACTGGTTGGG
CGACCAAGAT GCGATTGAGT TTATGTGCCG 201 CGCCGCGCCT GAAGCCGTAA
TTGAGTTGGA ACACATGGGT ATGCCTTTTG 251 ACCGTGTGGA AAGCGGTAAA
ATTTATCAGC GTCCTTTCGG CGGCCATACT 301 GCCGAACACG GTAAACGCGC
GGTAGAACGC GyCTGTGCGG TTGCCGACCG 351 TACAGGTCAT GCGATGCTGC
ATACTTTGTA CCAACAAAAC GTCCGTGCCA 401 ATACGCAATT CTTTGTGGAA
TGGACGGCAC AAGATTTGAT TCGTGATGAA 451 AACGGCGATG TCGTCGGCGT
AACCGCCATG GAAATGGAAA CCGGCGAAgT 501 TTATATTTTC CACGCTAAAG
CTGTGATGTT TGCTACCGGC GGCGGCGGTC 551 GTATTTATGC GTCTTCTACC
AATGCCTATA TGAATACCGG CGATGGTTTG 601 GGTATTTGTG CGCGTGCAGG
TATCCCGTTG GAAGACATGG AATTCTGGCA 651 ATTCCAGCCG ACCGGCGTGG
CGGGTGCGGG CGTGTTGATT ACCGAA....
This corresponds to the amino acid sequence <SEQ ID 64; ORF
010>:
TABLE-US-00176 m010.pep (PARTIAL) 1 ..XQLSKSGLNC AVLSKVFPTR
SHTVAAQGGI SASXGNVQED RWDWHMYDTV 51 KGSDWLGDQD AIEFMCRAAP
EAVIELEHMG MPFDRVESGK IYQRPFGGHT 101 AEHGKRAVER XCAVADRTGH
AMLHTLYQQN VRANTQFFVE WTAQDLIRDE 151 NGDVVGVTAM EMETGEVYIF
HAKAVMFATG GGGRIYASST NAYMNTGDGL 201 GICARAGIPL EDMEFWQFQP
TGVAGAGVLI TE...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 65>:
TABLE-US-00177 a010.seq 1 ATGGGCTTTC CTGTTCGCAA GTTTGATGCC
GTGATTGTCG GCGGTGGTGG 51 TGCAGGTTTA CGCGCANCCC TCCAATTATC
CAAATCCGGT CTGAATTGTG 101 CCGTTTTGTC TAAAGTGTTC CCGACCCGTT
CGCATACCGT AGCGGCGCAG 151 GGCGGTATTT CCGCCTCTCT GGGTAATGTG
CAGGAAGACC GTTGGGACTG 201 GCACATGTAC GATACCGTGA AAGGTTCCGA
CTGGTTGGGC GACCAAGATG 251 CGATTGAGTT TATGTGCCGC GCCGCGCCTG
AAGCCGTAAT TGAGTTGGAA 301 CACATGGGTA TGCCTTTTGA CCGTGTGGAA
AGCGGTAAAA TTTATCAGCG 351 TCCTTTCGGC GGCCATACTG CCGAACACGG
TAAACGCGCG GTAGAACGCG 401 CCTGTGCNGT TGCCGACCGT ACAGGTCATG
CGATGCTGCA TACTTTGTAC 451 CAACAAAATG TCCGTGCCAA TACGCAATTC
TTTGTGGAAT GGACGGCACA 501 AGATTTGATT CGTGATGAAA ACGGCGATGT
CGTCGGCGTA ACCGCCATGG 551 AAATGGAAAC CGGCGAAGTT TATATTTTCC
ACGCTAAAGC TGTGATGTTT 601 GCTACCGGCG GCGGCGGCCG TATTTATGCG
TCTTCTACCA ATGCCTATAT 651 GAATACCGGC GATGGTTTGG GTATTTGTGC
GCGTGCAGGT ATCCCGTTGG 701 AAGACATGGA ATTCTGGCAA TTCCACCCGA
CCGGCGTGGC AGGTGCGGGC 751 GTGTTGATTA CCGAAGGCGT ACGCGGCGAG
GGCGGTATTC TGTTGAATGC 801 CGACGGCGAA CGCTTTATGG AACGCTATGC
GCCGACCGTA AAAGACTTGG 851 CTTCTCGCGA CGTTGTTTCC CGCGCGATGG
CGATGGAAAT CTACGAAGGT 901 CGCGGCTGCG GTAAAAACAA AGACCATGTC
TTACTGAAAA TCGACCATAT 951 CGGCGCAGAA AAAATTATGG AAAAACTGCC
GGGCATCCGC GAGATTTCCA 1001 TTCAGTTCGC CGGTATCGAT CCGATTAAAG
ACCCGATTCC CGTTGTGCCG 1051 ACTACCCACT ATATGATGGG CGGTATTCCG
ACCAACTACC ATGGCGAAGT 1101 TGTCGTTCCT CAAGGCGACG AATACGAAGT
GCCTGTAAAA GGTCTGTATG 1151 CGGCAGGTGA GTGCGCCTGT GCTTCCGTAC
ACGGTGCGAA CCGCTTGGGT 1201 ACGAACTCCC TGCTGGACTT AGTGGTATTC
GGTAAAGCTG CCGGCGACAG 1251 CATGATTAAA TTCATCAAAG AGCAAAGCGA
CTGGAAACCT TTGCCTGCTA 1301 ATGCCGGCGA ACTGACCCGC CAACGTATCG
AGCGTTTGGA CAATCAAACT 1351 GATGGTGAAA ACGTTGATGC ATTGCGCCGC
GAACTGCAAC GCTCCGTACA 1401 ATTGCACGCC GGCGTGTTCC GTACTGATGA
GATTCTGAGC AAAGGCGTTC 1451 GAGAAGTCAT GGCGATTGCC GAGCGTGTGA
AACGTACCGA AATCAAAGAC 1501 AAGAGCAAAG TGTGGAATAC CGCGCGTATC
GAGGCTTTGG AATTGGATAA 1551 CCTAATTGAA GTGGCGAAAG CGACTTTGGT
GTCTGCCGAA GCACGTAAAG 1601 AATCACGCGG TGCGCACGCT TCAGACGACC
ATCCTGAGCG CGATGATGAA 1651 AACTGGATGA AACATACGCT GTACCATTCA
GATGCCAATA CCTTGTCCTA 1701 CAAACCGGTG CACACCAAGC CTTTGAGCGT
GGAATACATC AAACCGGCCA 1751 AGCGCGTTTA TTGA
This corresponds to the amino acid sequence <SEQ ID 66; ORF
010.a>:
TABLE-US-00178 a010.pep 1 MGFPVRKFDA VIVGGGGAGL RAXLQLSKSG
LNCAVLSKVF PTRSHTVAAQ 51 GGISASLGNV QEDRWDWHMY DTVKGSDWLG
DQDAIEFMCR AAPEAVIELE 101 HMGMPFDRVE SGKIYQRPFG GHTAEHGKRA
VERACAVADR TGHAMLHTLY 151 QQNVRANTQF FVEWTAQDLI RDENGDVVGV
TAMEMETGEV YIFHAKAVMF 201 ATGGGGRIYA SSTNAYMNTG DGLGICARAG
IPLEDMEFWQ FHPTGVAGAG 251 VLITEGVRGE GGILLNADGE RFMERYAPTV
KDLASRDVVS RAMAMEIYEG 301 RGCGKNKDHV LLKIDHIGAE KIMEKLPGIR
EISIQFAGID PIKDPIPVVP 351 TTHYMMGGIP TNYHGEVVVP QGDEYEVPVK
GLYAAGECAC ASVHGANRLG 401 TNSLLDLVVF GKAAGDSMIK FIKEQSDWKP
LPANAGELTR QRIERLDNQT 451 DGENVDALRR ELQRSVQLHA GVFRTDEILS
KGVREVMAIA ERVKRTEIKD 501 KSKVWNTARI EALELDNLIE VAKATLVSAE
ARKESRGAHA SDDHPERDDE 551 NWMKHTLYHS DANTLSYKPV HTKPLSVEYI KPAKRVY*
m010/a010 98.7% identity over a 231 aa overlap 10 20 30 m010.pep
XQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASXGNV
|||||||||||||||||||||||||||||||| ||| a010
MGFPVRKFDAVIVGGGGAGLRAXLQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV 10 20
30 40 50 60 40 50 60 70 80 90 m010.pep
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a010
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG 70 80
90 100 110 120 100 110 120 130 140 150 m010.pep
GHTAEHGKRAVERXCAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| a010
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV 130
140 150 160 170 180 160 170 180 190 200 210 m010.pep
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a010
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ 190
200 210 220 230 240 220 230 m010.pep FQPTGVAGAGVLITE
|:||||||||||||| a010
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG 250
260 270 280 290 300
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 010
shows 98.7% identity over a 231 aa overlap with a predicted ORF
(ORF 010.ng) from N. gonorrhoeae:
TABLE-US-00179 m010.pep/g010.pep 10 20 30 m010.pep
XQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASXGNV
|||||||||||||||||||||||||||||||| ||| g010
MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV 10 20
30 40 50 60 40 50 60 70 80 90 m010.pep
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG 70 80
90 100 110 120 100 110 120 130 140 150 m010.pep
GHTAEHGKRAVERXCAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| g010
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV 130
140 150 160 170 180 160 170 180 190 200 210 m010.pep
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ 190
200 210 220 230 240 220 230 m010.pep FQPTGVAGAGVLITE
|:||||||||||||| g010
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG 250
260 270 280 290 300
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 67>:
TABLE-US-00180 g010-1.seq.. 1 ATGGGTTTTC CTGTTCGCAA GTTTGATGCC
GTGATTGTCG GCGGTGGCGG 51 TGCAGGTTTA CGTGCAGCCC TCCAATTATC
CAAATCCGGT TTGAATTGTG 101 CCGTTTTGTC TAAAGTGTTC CCGACCCGCT
CGCATACCGT AGCGGCGCAG 151 GGCGGTATTT CCGCCTCTCT GGGTAATGTG
CAGGAGGACC GTTGGGACTG 201 GCACATGTAC GATACCGTGA AAGGTTCCGA
CTGGCTGGGC GACCAAGATG 251 CGATTGAGTT TATGTGTCGC GCTGCGCCTG
AAGCGGTGAT TGAGTTGGAA 301 CACATGGGTA TGCCTTTTGA CCGCGTTGAA
AGCGGCAAAA TTTATCAGCG 351 TCCTTTCGGC GGACATACTG CCGAACATGG
TAAACGTGCG GTAGAACGTG 401 CATGTGCGGT TGCCGACCGT ACCGGTCATG
CGATGTTGCA TACTTTGTAC 451 CAACAAAACG TCCGTGCCAA TACACAATTC
TTTGTGGAAT GGACGGCGCA 501 AGATTTGATT CGTGATGAAA ACGGCGATGT
CGTCGGCGTA ACCGCCATGG 551 AAATGGAAAC GGGCGAAGTT TATATTTTCC
ACGCCAAGGC CGTGATGTTT 601 GCTACCGGTG GCGGCGGTCG TATTTATGCT
TCTTCTACCA ATGCTTATAT 651 GAATACCGGT GACGGTTTGG GCATTTGCGC
CCGTGCGGGC ATTCCGTTGG 701 AAGATATGGA ATTCTGGCAA TTCCACCCGA
CCGGCGTGGC GGGTGCGGGC 751 GTGTTGATTA CCGAAGGCGT ACGCGGCGAG
GGCGGTATTC TGTTGAACGC 801 CGACGGCGAA CGCTTTATGG AACGCTATGC
GCCGACCGTA AAAGACTTGG 851 CTTCTCGCGA CGTGGTTTCA CGCGCGATGG
CGATGGAAAT CTATGAAGGT 901 CGCGGCTGTG GTAAAAACAA AGACCACGTC
TTACTGAAAA TCGACCATAT 951 CGGTGCAGAA AAAATTATGG AAAAACTGCC
GGGCATCCGC GAGATTTCCA 1001 TTCAGTTTGC CGGTATCGAT CCGATTAAAG
ACCCGATTCC GGTTGTGCCG 1051 ACTACCCACT ATATGATGGG CGGCATTCCG
ACCAATTATC ACGGTGAAGT 1101 TGTTGTTCCG CAAGGCGACG AGTACGAAGT
ACCTGTAAAA GGCCTGTATG 1151 CCGCAGGTGA GTGCGCCTGT GCTTCCGTAC
ACGGTGCGAA CCGTTTGGGT 1201 ACGAACTCCC TGCTGGACTT GGTGGTGTTC
cgcccaaccc cccggtga
This corresponds to the amino acid sequence <SEQ ID 68; ORF
010-1.ng>:
TABLE-US-00181 g010-1.pep 1 MGFPVRKFDA VIVGGGGAGL RAALQLSKSG
LNCAVLSKVF PTRSHTVAAQ 51 GGISASLGNV QEDRWDWHMY DTVKGSDWLG
DQDAIEFMCR AAPEAVIELE 101 HMGMPFDRVE SGKIYQRPFG GHTAEHGKRA
VERACAVADR TGHAMLHTLY 151 QQNVRANTQF FVEWTAQDLI RDENGDVVGV
TAMEMETGEV YIFHAKAVMF 201 ATGGGGRIYA SSTNAYMNTG DGLGICARAG
IPLEDMEFWQ FHPTGVAGAG 251 VLITEGVRGE GGILLNADGE RFMERYAPTV
KDLASRDVVS RAMAMEIYEG 301 RGCGKNKDHV LLKIDHIGAE KIMEKLPGIR
EISIQFAGID PIKDPIPVVP 351 TTHYMMGGIP TNYHGEVVVP QGDEYEVPVK
GLYAAGECAC ASVHGANRLG 401 TNSLLDLVVF RPTPR* g010-1/P10444
sp|P10444|DHSA_ECOLI SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT
gnl|PID|d1015210 (D90711) Succinate dehydrogenase, flavoprotein
[Escherichia coli] gi|1786942 (AE000175) succinate dehydrogenase
flavoprotein subunit [Escherichia coli] Length = 588 Score = 1073
(495.6 bits), Expect = 6.7e-169, Sum P(2) = 6.7e-169 Identities =
191/303 (63%), Positives = 238/303 (78%) Query: 1
MGFPVRKFDAVIVXXXXXXXXXXXXXSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV 60 M
PVR+FDAV++ S+SG CA+LSKVFPTRSHTV+AQGGI+ +LGN Sbjct: 1
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT 60
Query: 61
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG 120 ED
W+WHMYDTVKGSD++GDQDAIE+MC+ PEA++ELEHMG+PF R++ G+IYQRPFG Sbjct: 61
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG 120
Query: 121
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV 180 G
+ G R A ADRTGHA+LHTLYQQN++ +T F EW A DL+++++G VVG Sbjct: 121
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC 180
Query: 181
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ 240
TA+ +ETGEV F A+A + ATGG GRIY S+TNA++NTGDG+G+ RAG+P++DME WQ Sbjct:
181 TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
240 Query: 241
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG 300
FHPTG+AGAGVL+TEG RGEGG LLN GERFMERYAP KDLA RDVV+R++ +EI EG Sbjct:
241 FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
300 Query: 301 RGC 303 RGC Sbjct: 301 RGC 303 Score = 249 (115.0
bits), Expect = 6.7e-169, Sum P(2) = 6.7e-169 Identities = 53/102
(51%), Positives = 62/102 (60%) Query: 309
HVLLKIDHIGAEKIMEKLPGIREISIQFAGXXXXXXXXXXXXTTHYMMGGIPTNYHGEVV 368 H
LK+DH+G E + +LPGI E+S FA T HYMMGGIPT G+ + Sbjct: 310
HAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAL 369
Query: 369 VPQGDEYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVF 410 +V V GL+A
GE AC SVHGANRLG NSLLDLVVF Sbjct: 370
TVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVF 411
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 69>:
TABLE-US-00182 m010-1.seq.. 1 ATGGGTTTTC CTGTTCGCAA GTTTGATGCC
GTGATTGTCG GCGGTGGTGG 51 TGCAGGTTTA CGCGCAGCCC TCCAATTATC
CAAATCCGGT CTGAATTGTG 101 CCGTTTTGTC TAAAGTGTTC CCGACCCGTT
CGCATACCGT AGCGGCGCAg 151 GGCGGTATTT CCGCCTCTCT GGGTAATGTG
CAGGAAGACC GTTGGGACTG 201 GCACATGTAC GATACCGTGA AAGGTTCCGA
CTGGTTGGGC GACCAAGATG 251 CGATTGAGTT TATGTGCCGC GCCGCGCCTG
AAGCCGTAAT TGAGTTGGAA 301 CACATGGGTA TGCCTTTTGA CCGTGTGGAA
AGCGGTAAAA TTTATCAGCG 351 TCCTTTCGGC GGCCATACTG CCGAACACGG
TAAACGCGCG GTAGAACGCG 401 CCTGTGCGGT TGCCGACCGT ACAGGTCATG
CGATGCTGCA TACTTTGTAC 451 CAACAAAACG TCCGTGCCAA TACGCAATTC
TTTGTGGAAT GGACGGCACA 501 AGATTTGATT CGTGATGAAA ACGGCGATGT
CGTCGGCGTA ACCGCCATGG 551 AAATGGAAAC CGGCGAAGTT TATATTTTCC
ACGCTAAAGC TGTGATGTTT 601 GCTACCGGCG GCGGCGGTCG TATTTATGCG
TCTTCTACCA ATGCCTATAT 651 GAATACCGGC GATGGTTTGG GTATTTGTGC
GCGTGCAGGT ATCCCGTTGG 701 AAGACATGGA ATTCTGGCAA TTCCACCCGA
CCGGCGTGGC GGGTGCGGGC 751 GTGTTGATTA CCGAAGGCGT ACGCGGCGAG
GGCGGTATTC TGTTGAATGC 801 CGACGGCGAA CGCTTTATGG AACGCTATGC
GCCGACCGTA AAAGACTTGG 851 CTTCTCGCGA CGTTGTTTCC CGCGCGATGG
CGATGGAAAT CTACGAAGGT 901 CGCGGCTGCG GTAAAAACAA AGACCATGTC
TTACTGAAAA TCGACCATAT 951 CGGCGCAGAA AAAATTATGG AAAAACTGCC
GGGCATCCGC GAGATTTCCA 1001 TTCAGTTCGC CGGTATCGAT CCGATTAAAG
ACCCGATTCC CGTTGTGCCG 1051 ACTACCCACT ATATGATGGG CGGCATTCCG
ACCAATTACC ACGGCGAAGT 1101 TGTCGTTCCG CAAGGTGAAG ATTACGAAGT
GCCTGTAAAA GGTCTGTATG 1151 CGGCAGGTGA GTGCGCTTGT GCTTCCGTAC
ACGGTGCGAA CCGCTTGGGT 1201 ACCAACTCCC TGTTGGACTT GGTGGTATTC
GGTAAAGCTG CCGGCGACAG 1251 CATGATTAAA TTCATCAAAG AGCAAAGCGA
CTGGAAACCT TTGCCTGCTA 1301 ATGCAGGTGA GTTGACCCGC CAACGTATCG
AGCGTTTGGA CAACCAAACC 1351 GATGGTGAAA ACGTTGATGC ATTGCGTCGC
GAACTGCAAC GCTCTGTACA 1401 ACTGCACGCC GGCGTGTTCC GTACTGATGA
GATTCTGAGC AAAGGCGTTC 1451 GAGAAGTCAT GGCGATTGCC GAGCGTGTGA
AACGTACCGA AATCAAAGAC 1501 AAGAGCAAAG TGTGGAATAC CGCGCGTATC
GAGGCTTTGG AATTGGATAA 1551 CCTGATTGAA GTGGCGAAAG CGACTTTGGT
GTCTGCCGAA GCACGTAAAG 1601 AATCACGCGG TGCGCACGCT TCAGACGACC
ATCCTGAGCG CGATGATGAA 1651 AACTGGATGA AACATACGCT GTACCATTCA
GATATCAATA CCTTGTCCTA 1701 CAAACCGGTG CACACCAAGC CTTTGAGCGT
GGAATACATC AAACCGGCCA 1751 AGCGCGTTTA TTGATGA
This corresponds to the amino acid sequence <SEQ ID 70; ORF
010-1>:
TABLE-US-00183 m010-1.pep.. 1 MGFPVRKFDA VIVGGGGAGL RAALQLSKSG
LNCAVLSKVF PTRSHTVAAQ 51 GGISASLGNV QEDRWDWHMY DTVKGSDWLG
DQDAIEFMCR AAPEAVIELE 101 HMGMPFDRVE SGKIYQRPFG GHTAEHGKRA
VERACAVADR TGHAMLHTLY 151 QQNVRANTQF FVEWTAQDLI RDENGDVVGV
TAMEMETGEV YIFHAKAVMF 201 ATGGGGRIYA SSTNAYMNTG DGLGICARAG
IPLEDMEFWQ FHPTGVAGAG 251 VLITEGVRGE GGILLNADGE RFMERYAPTV
KDLASRDVVS RAMAMEIYEG 301 RGCGKNKDHV LLKIDHIGAE KIMEKLPGIR
EISIQFAGID PIKDPIPVVP 351 TTHYMMGGIP TNYHGEVVVP QGEDYEVPVK
GLYAAGECAC ASVHGANRLG 401 TNSLLDLVVF GKAAGDSMIK FIKEQSDWKP
LPANAGELTR QRIERLDNQT 451 DGENVDALRR ELQRSVQLHA GVFRTDEILS
KGVREVMAIA ERVKRTEIKD 501 KSKVWNTARI EALELDNLIE VAKATLVSAE
ARKESRGAHA SDDHPERDDE 551 NWMKHTLYHS DINTLSYKPV HTKPLSVEYI KPAKRVY*
m010-1/g010-1 99.5% identity in 410 aa overlap 10 20 30 40 50 60
m010-1.pep
MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV 10 20
30 40 50 60 70 80 90 100 110 120 m010-1.pep
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG 70 80
90 100 110 120 130 140 150 160 170 180 m010-1.pep
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV 130
140 150 160 170 180 190 200 210 220 230 240 m010-1.pep
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ 190
200 210 220 230 240 250 260 270 280 290 300 m010-1.pep
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG 250
260 270 280 290 300 310 320 330 340 350 360 m010-1.pep
RGCGKNKDHVILKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g010-1
RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP 310
320 330 340 350 360 370 380 390 400 410 420 m010-1.pep
TNYHGEVVVPQGEDYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK
||||||||||||::|||||||||||||||||||||||||||||||||||| g010-1
TNYHGEVVVPQGDEYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFRPTPRX 370 380
390 400 410 430 440 450 460 470 480 m010-1.pep
FIKEQSDWKPLPANAGELTRQRIERLDNQTDGENVDALRRELQRSVQLHAGVFRTDEILS
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 71>:
TABLE-US-00184 a010-1.seq.. 1 ATGGGCTTTC CTGTTCGCAA GTTTGATGCC
GTGATTGTCG GCGGTGGTGG 51 TGCAGGTTTA CGCGCANCCC TCCAATTATC
CAAATCCGGT CTGAATTGTG 101 CCGTTTTGTC TAAAGTGTTC CCGACCCGTT
CGCATACCGT AGCGGCGCAG 151 GGCGGTATTT CCGCCTCTCT GGGTAATGTG
CAGGAAGACC GTTGGGACTG 201 GCACATGTAC GATACCGTGA AAGGTTCCGA
CTGGTTGGGC GACCAAGATG 251 CGATTGAGTT TATGTGCCGC GCCGCGCCTG
AAGCCGTAAT TGAGTTGGAA 301 CACATGGGTA TGCCTTTTGA CCGTGTGGAA
AGCGGTAAAA TTTATCAGCG 351 TCCTTTCGGC GGCCATACTG CCGAACACGG
TAAACGCGCG GTAGAACGCG 401 CCTGTGCNGT TGCCGACCGT ACAGGTCATG
CGATGCTGCA TACTTTGTAC 451 CAACAAAATG TCCGTGCCAA TACGCAATTC
TTTGTGGAAT GGACGGCACA 501 AGATTTGATT CGTGATGAAA ACGGCGATGT
CGTCGGCGTA ACCGCCATGG 551 AAATGGAAAC CGGCGAAGTT TATATTTTCC
ACGCTAAAGC TGTGATGTTT 601 GCTACCGGCG GCGGCGGCCG TATTTATGCG
TCTTCTACCA ATGCCTATAT 651 GAATACCGGC GATGGTTTGG GTATTTGTGC
GCGTGCAGGT ATCCCGTTGG 701 AAGACATGGA ATTCTGGCAA TTCCACCCGA
CCGGCGTGGC AGGTGCGGGC 751 GTGTTGATTA CCGAAGGCGT ACGCGGCGAG
GGCGGTATTC TGTTGAATGC 801 CGACGGCGAA CGCTTTATGG AACGCTATGC
GCCGACCGTA AAAGACTTGG 851 CTTCTCGCGA CGTTGTTTCC CGCGCGATGG
CGATGGAAAT CTACGAAGGT 901 CGCGGCTGCG GTAAAAACAA AGACCATGTC
TTACTGAAAA TCGACCATAT 951 CGGCGCAGAA AAAATTATGG AAAAACTGCC
GGGCATCCGC GAGATTTCCA 1001 TTCAGTTCGC CGGTATCGAT CCGATTAAAG
ACCCGATTCC CGTTGTGCCG 1051 ACTACCCACT ATATGATGGG CGGTATTCCG
ACCAACTACC ATGGCGAAGT 1101 TGTCGTTCCT CAAGGCGACG AATACGAAGT
GCCTGTAAAA GGTCTGTATG 1151 CGGCAGGTGA GTGCGCCTGT GCTTCCGTAC
ACGGTGCGAA CCGCTTGGGT 1201 ACGAACTCCC TGCTGGACTT AGTGGTATTC
GGTAAAGCTG CCGGCGACAG 1251 CATGATTAAA TTCATCAAAG AGCAAAGCGA
CTGGAAACCT TTGCCTGCTA 1301 ATGCCGGCGA ACTGACCCGC CAACGTATCG
AGCGTTTGGA CAATCAAACT 1351 GATGGTGAAA ACGTTGATGC ATTGCGCCGC
GAACTGCAAC GCTCCGTACA 1401 ATTGCACGCC GGCGTGTTCC GTACTGATGA
GATTCTGAGC AAAGGCGTTC 1451 GAGAAGTCAT GGCGATTGCC GAGCGTGTGA
AACGTACCGA AATCAAAGAC 1501 AAGAGCAAAG TGTGGAATAC CGCGCGTATC
GAGGCTTTGG AATTGGATAA 1551 CCTAATTGAA GTGGCGAAAG CGACTTTGGT
GTCTGCCGAA GCACGTAAAG 1601 AATCACGCGG TGCGCACGCT TCAGACGACC
ATCCTGAGCG CGATGATGAA 1651 AACTGGATGA AACATACGCT GTACCATTCA
GATGCCAATA CCTTGTCCTA 1701 CAAACCGGTG CACACCAAGC CTTTGAGCGT
GGAATACATC AAACCGGCCA 1751 AGCGCGTTTA TTGA
This corresponds to the amino acid sequence <SEQ ID 72; ORF
010-1.a>:
TABLE-US-00185 a010-1.pep.. 1 MGFPVRKFDA VIVGGGGAGL RAXLQLSKSG
LNCAVLSKVF PTRSHTVAAQ 51 GGISASLGNV QEDRWDWHMY DTVKGSDWLG
DQDAIEFMCR AAPEAVIELE 101 HMGMPFDRVE SGKIYQRPFG GHTAEHGKRA
VERACAVADR TGHAMLHTLY 151 QQNVRANTQF FVEWTAQDLI RDENGDVVGV
TAMEMETGEV YIFHAKAVMF 201 ATGGGGRIYA SSTNAYMNTG DGLGICARAG
IPLEDMEFWQ FHPTGVAGAG 251 VLITEGVRGE GGILLNADGE RFMERYAPTV
KDLASRDVVS RAMAMEIYEG 301 RGCGKNKDHV LLKIDHIGAE KIMEKLPGIR
EISIQFAGID PIKDPIPVVP 351 TTHYMMGGIP TNYHGEVVVP QGDEYEVPVK
GLYAAGECAC ASVHGANRLG 401 TNSLLDLVVF GKAAGDSMIK FIKEQSDWKP
LPANAGELTR QRIERLDNQT 451 DGENVDALRR ELQRSVQLHA GVFRTDEILS
KGVREVMAIA ERVKRTEIKD 501 KSKVWNTARI EALELDNLIE VAKATLVSAE
ARKESRGAHA SDDHPERDDE 551 NWMKHTLYHS DANTLSYKPV HTKPLSVEYI KPAKRVY*
m010-1/a010-1 99.3% identity in 587 aa overlap 10 20 30 40 50 60
a010-1.pep
MGFPVRKFDAVIVGGGGAGLRAXLQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| a010-1
MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV 10 20
30 40 50 60 70 80 90 100 110 120 a010-1.pep
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG 70 80
90 100 110 120 130 140 150 160 170 180 a010-1.pep
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV 130
140 150 160 170 180 190 200 210 220 230 240 a010-1.pep
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ 190
200 210 220 230 240 250 260 270 280 290 300 a010-1.pep
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG 250
260 270 280 290 300 310 320 330 340 350 360 a010-1.pep
RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP 310
320 330 340 350 360 370 380 390 400 410 420 a010-1.pep
TNYHGEVVVPQGDEYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK
||||||||||||::|||||||||||||||||||||||||||||||||||||||||||||| m010-1
TNYHGEVVVPQGEDYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK 370
380 390 400 410 420 430 440 450 460 470 480 a010-1.pep
FIKEQSDWKPLPANAGELTRQRIERLDNQTDGENVDALRRELQRSVQLHAGVFRTDEILS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
FIKEQSDWKPLPANAGELTRQRIERLDNQTDGENVDALRRELQRSVQLHAGVFRTDEILS 430
440 450 460 470 480 490 500 510 520 530 540 a010-1.pep
KGVREVMAIAERVKRTEIKDKSKVWNTARIEALELDNLIEVAKATLVSAEARKESRGAHA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m010-1
KGVREVMAIAERVKRTEIKDKSKVWNTARIEALELDNLIEVAKATLVSAEARKESRGAHA 490
500 510 520 530 540 550 560 570 580 a010-1.pep
SDDHPERDDENWMKHTLYHSDANTLSYKPVHTKPLSVEYIKPAKRVYX
||||||||||||||||||||| |||||||||||||||||||||||||| m010-1
SDDHPERDDENWMKHTLYHSDINTLSYKPVHTKPLSVEYIKPAKRVYX 550 560 570
580
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 73>:
TABLE-US-00186 g011.seq 1 ATGAAGACAC ACCGCAAGAC CTGCTCTGCG
GTGTGTTTTG CTTTTCAGAC 51 GGCATCGAAA CCCGCCGTTT CCATCCGACA
TCCCAGCGAG GACATCATGA 101 GCCTGAAAAC CCGCCTTACC GAAGATATGA
AAACCGCGAT GCGCGCCAAA 151 GATCAAGTTT CCCTCGGCAC CATCCGCCTC
ATCAATGCCG CCGTCAAACA 201 GTTTGAAGTA GACGAACGCA CCGAAGCCGA
CGATGCCAAA ATCACCGCCA 251 TCCTGACCAA AATGGTCAAA CAGCGCAAAG
ACGGCGCGAA AATCTACACT 301 GAAGCCGGCC GTCAGGATTT GGCAGACAAA
GAAAACGCCG AAATCGACGT 351 GCTGCACCGC TACCTGCCGC AAATGCTCTC
CGCCGGCGAA ATCCGCACCG 401 CCGTCGAAGC AGCCGTTGCC GAAACCGGCG
CGGCAGGTAT GGCGGATATG 451 GGCAAAGTGA TGGTCGTATT GAAAAcccGC
CTCGCCGGCA AAGccgATAT 501 GGGCGAAGTC AACAAAATCT TGAAAAccGt
aCTGACCGCC tga
This corresponds to the amino acid sequence <SEQ ID 74; ORF
011.ng>:
TABLE-US-00187 g011.pep 1 MKTHRKTCSA VCFAFQTASK PAVSIRHPSE
DIMSLKTRLT EDMKTAMRAK 51 DQVSLGTIRL INAAVKQFEV DERTEADDAK
ITAILTKMVK QRKDGAKIYT 101 EAGRQDLADK ENAEIDVLHR YLPQMLSAGE
IRTAVEAAVA ETGAAGMADM 151 GKVMVVLKTR LAGKADMGEV NKILKTVLTA *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 75>:
TABLE-US-00188 m011.seq (partial) 1 ATGAGGACAC ACCGCAAGAC
CTGCTCTGCG GTGTGTTTTG CTTTTCAGAC 51 GGCATCGAAA CCCGCCGTTT
CCATCCGACA TCCCAGCGAG GACATCATGA 101 GCCTGAAAAT CCGCCTTACC
GAAGACATGA AAACCGCGAT GCGCGCCAAA 151 GACCAAGTTT CCCTCGGCAC
CATCCGCCTC ATCAACGCCG CCGTCAAACA 201 GTTTGAAGTG GACGAACGCA
CCGAAGCCGA CGATGCCAAA ATCACCGCCA 251 TCCTGACCAA AATGGTCAAA
CAGCGAAAAG ACAGCGCGAA AATCTACACT 301 GAAGCCGGCC GTCAGGATTT
GGCAGACAAA GAAAACGCCG AAATCGAGGT 351 ACTGCACCGC TACCTTCCCC
AAATGCTTTC CGCCGGCGAA ATCCGTACCG 401 AGGTCGAAGC TGCCGTTGCC
GAAACCGGCG CGGCAGGTAT GGCGGATATG 451 GGTAAAGTCA TGGGGCTGCT
GAAAACCCGC CTCGCAGGTA AAGCCGA...
This corresponds to the amino acid sequence <SEQ ID 76; ORF
011>:
TABLE-US-00189 m011.pep (partial) 1 MRTHRKTCSA VCFAFQTASK
PAVSIRHPSE DIMSLKIRLT EDMKTAMRAK 51 DQVSLGTIRL INAAVKQFEV
DERTEADDAK ITAILTKMVK QRKDSAKIYT 101 EAGRQDLADK ENAEIEVLHR
YLPQMLSAGE IRTEVEAAVA ETGAAGMADM 151 GKVMGLLKTR LAGKA.....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 011
shows 95.8% identity over a 165 aa overlap with a predicted ORF
(ORF 011.ng) from N. gonorrhoeae:
TABLE-US-00190 m011/g011 10 20 30 40 50 60 m011.pep
MRTHRKTCSAVCFAFQTASKPAVSIRHPSEDIMSLKIRLTEDMKTAMRAKDQVSLGTIRL
|:|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| g011
MKTHRKTCSAVCFAFQTASKPAVSIRHPSEDIMSLKTRLTEDMKTAMRAKDQVSLGTIRL 10 20
30 40 50 60 70 80 90 100 110 120 m011.pep
INAAVKQFEVDERTEADDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHR
||||||||||||||||||||||||||||||||||:||||||||||||||||||||:|||| g011
INAAVKQFEVDERTEADDAKITAILTKMVKQRKDGAKIYTEAGRQDLADKENAEIDVLHR 70 80
90 100 110 120 130 140 150 160 m011.pep
YLPQMLSAGEIRTEVEAAVAETGAAGMADMGKVMGLLKTRLAGKA |||||||||||||
|||||||||||||||||||| :||||||||| g011
YLPQMLSAGEIRTAVEAAVAETGAAGMADMGKVMVVLKTRLAGKADMGEVNKILKTVLTA 130
140 150 160 170 180 g011 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 77>:
TABLE-US-00191 g012.seq 1 ATGCTCGCCC GTCGCTATTT TTTCAATATC
CAACCCGGGG CGGTTTTCAC 51 TGACAAACTG CTTGAACAAC TGATGCGTTT
CCTCCAGTTC CTGCCGGAAT 101 TTCTGTTTGC CCTTTTCCGT ATTTTCACCC
ATAAAAGTAA CCGTGCGCTT 151 AAATTCGCCC GCCGTCATCA CATCCACATC
AATATCATGT TTTTTCAACa 201 gGcggTGGAT ATTCGgcact tccgCcacca
cacccaccga accgatgacc 251 gcaaacggaG CGGAAACAAT TTTATCCGCc
acacacgcca tcatatagcc 301 gcCGCTTGCC GCGACCTTAT CGAcggcgac
ggTCAGCGGA ATATTGCGTT 351 CGCGCAAACG CCTAAGCTGC GAAGCCGCCA
AACCGTAACC GTGAACCACG 401 CCGCCCGGAC TTTCCAATCT GAGCAGAACC
TCATCTTCAG GCTTGGCAAT 451 CAAAAGCACC GCCGTAATCT CATGACGCAA
GGATTCTACG GCGTGTGCAT 501 ACAAATCGCC GTCAAAATCC AACACAAAAA
GGCGGGATTT TTGCGTTTCG 551 GCAGATTTCT CCCCGCCCTC CTTCAAACGC
TTTTTCTCTG CTTTGGCTTC 601 CGCCTTTTCC TTTTTCTTTT CTTTTTTTTC
CTGATGTTTT GTCTCTTCCT 651 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 78; ORF
012.ng>:
TABLE-US-00192 g012.pep 1 MLARRYFFNI QPGAVFTDKL LEQLMRFLQF
LPEFLFALFR IFTHKSNRAL 51 KFARRHHIHI NIMFFQQAVD IRHFRHHTHR
TDDRKRSGNN FIRHTRHHIA 101 AACRDLIDGD GQRNIAFAQT PKLRSRQTVT
VNHAARTFQS EQNLIFRLGN 151 QKHRRNLMTQ GFYGVCIQIA VKIQHKKAGF
LRFGRFLPAL LQTLFLCFGF 201 RLFLFLFFFF LMFCLFLA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 79>:
TABLE-US-00193 m012.seq 1 ATGCTCGCCC GTTGCCACTT CCTCAATATC
CAATTGAGGG CGGTTCTCGC 51 TGACAAACTG CTTGAACAAC TGATGCGTTT
CCTCCAGTTC CTGTCGGAAT 101 TTCTGTTTGC CCTTTTCCGT ATTTTCACCC
ATAAAAGTAA CCGTGCGCTT 151 AAATTCGCCC GCCGTCATCA CATCCACATC
AATATCATGT TTTTTCAACA 201 GGCGGTGGAT ATTCGGTACT TCCGCCACCA
CACCCACCGA ACCGACAATC 251 GCAAACGGAG CGGAAGCAAT TTTATCCGCC
ACACACGCCA TCATATAACC 301 GCCGCTCGCn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 351 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 451 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 501 nnnnnnnnnn nnnnnnnnnC AACACAAAAA
GGCGTGATTT nTGCGTTTCG 551 GCAGATTTCT CCCCACCCTC CTTCAAACGT
TTTTCcTCTG CTTTGGCTTC 601 CGCCTTTTCC TTTTTCTTTT CCTCTTTTTC
CTGATGTTGT GCCTCTTCCC 651 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 80; ORF
012>:
TABLE-US-00194 m012.pep 1 MLARCHFLNI QLRAVLADKL LEQLMRFLQF
LSEFLFALFR IFTHKSNRAL 51 KFARRHHIHI NIMFFQQAVD IRYFRHHTHR
TDNRKRSGSN FIRHTRHHIT 101 AARXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX 151 XXXXXXXXXX XXXXXXXXXX XXXQHKKA*F
XRFGRFLPTL LQTFFLCFGF 201 RLFLFLFLFF LMLCLFPA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 81>:
TABLE-US-00195 a012.seq 1 ATGCTCGCCC GTTGCCACTT CCTCAATATC
CAATTGAGGG CGGTTCTCGC 51 TGACAAACTG CTTGAACAAC TGATGCGTTT
CCTCCAGTTC CTGTCGGAAT 101 TTCTGTTTGC CCTTTTCCGT ATTTTCACCC
ATAAAAGTAA CCGTGCGCTT 151 AAATTCGCCC GCCGTCATCA CATCCACATC
AATATCATGT TTTTTCAACA 201 GGCGGTGGAT ATTCGGTACT TCCGCTACAA
CACCCACCGA ACCGACAATC 251 GCAAACGGAG CGGAAACAAT TTTATCCGCC
ACACACGCCA TCATATAACC 301 ACCGCTCGCC GCCACCTTAT CGACGGCGAC
GGTCAGCGGA ATATTGCGTT 351 CGCGCAAACG CCTAAGCTGC GAAGCCGCCA
AACCGTAACC GTGAACCACG 401 CCGCCCGGAC TTTCCAATCT AAGCAGAACC
TCATCTTCAG GCTTGGCAAT 451 CAAAAGCACC GCCGTAATCT CATGACGCAA
GGATTCTACG GCGTGTGCAT 501 ACAAATCGCC GTCAAAATCC AACACAAAAA
GGCGGGATTT TTGCGTTTCG 551 GAAGATTTCT CCCCACCCTC CTTCAAACGC
TTTTTCTCTG CTTTGGCTTC 601 CGCCTTTTCC TTTTTCTTTT CCTCTTTTTC
CTGATGTTTT GCCTCTTCCC 651 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 82; ORF
012.a>:
TABLE-US-00196 a012.pep 1 MLARCHFLNI QLRAVLADKL LEQLMRFLQF
LSEFLFALFR IFTHKSNRAL 51 KFARRHHIHI NIMFFQQAVD IRYFRYNTHR
TDNRKRSGNN FIRHTRHHIT 101 TARRHLIDGD GQRNIAFAQT PKLRSRQTVT
VNHAARTFQS KQNLIFRLGN 151 QKHRRNLMTQ GFYGVCIQIA VKIQHKKAGF
LRFGRFLPTL LQTLFLCFGF 201 RLFLFLFLFF LMFCLFPA* m012/a012 64.2%
identity over a 218 aa overlap 10 20 30 40 50 60 m012.pep
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a012
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI 10 20
30 40 50 60 70 80 90 100 110 120 m012.pep
NIMFFQQAVDIRYFRHHTHRTDNRKRSGSNFIRHTRHHITAARXXXXXXXXXXXXXXXXX
|||||||||||||||::|||||||||||:|||||||||||:|| a012
NIMFFQQAVDIRYFRYNTHRTDNRKRSGNNFIRHTRHHITTARRHLIDGDGQRNIAFAQT 70 80
90 100 110 120 130 140 150 160 170 180 m012.pep
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHKKAXF : : :
: ||||| | a012
PKLRSRQTVTVNHAARTFQSKQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF 130
140 150 160 170 180 190 200 210 219 m012.pep
XRFGRFLPTLLQTFFLCFGFRLFLFLFLFFLMLCLFPAX
||||||||||||:||||||||||||||||||:|||||| a012
LRFGRFLPTLLQTLFLCFGFRLFLFLFLFFLMFCLFPAX 190 200 210
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 012
shows 58.7% identity over a 218 aa overlap with a predicted ORF
(ORF 012.ng) from N. gonorrhoeae:
TABLE-US-00197 m012/g012 10 20 30 40 50 60 m012.pep
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI ||||
:|:||| ||::|||||||||||||| |||||||||||||||||||||||||||| g012
MLARRYFFNIQPGAVFTDKLLEQLMRFLQFLPEFLFALFRIFTHKSNRALKFARRHHIHI 10 20
30 40 50 60 70 80 90 100 110 120 m012.pep
NIMFFQQAVDIRYFRHHTHRTDNRKRSGSNFIRHTRHHITAARXXXXXXXXXXXXXXXXX
||||||||||||:|||||||||:|||||:||||||||||:|| g012
NIMFFQQAVDIRHFRHHTHRTDDRKRSGNNFIRHTRHHIAAACRDLIDGDGQRNIAFAQT 70 80
90 100 110 120 130 140 150 160 170 180 m012.pep
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHKKAXF : : :
: ||||| | g012
PKLRSRQTVTVNHAARTFQSEQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF 130
140 150 160 170 180 190 200 210 219 m012.pep
XRFGRFLPTLLQTFFLCFGFRLFLFLFLFFLMLCLFPAX
|||||||:||||:|||||||||||||:||||:||| || g012
LRFGRFLPALLQTLFLCFGFRLFLFLFFFFLMFCLFLAX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 83>:
TABLE-US-00198 m012-1.seq 1 ATGCTCGCCC GTTGCCACTT CCTCAATATC
CAATTGAGGG CGGTTCTCGC 51 TGACAAACTG CTTGAACAAC TGATGCGTTT
CCTCCAGTTC CTGTCGGAAT 101 TTCTGTTTGC CCTTTTCCGT ATTTTCACCC
ATAAAAGTAA CCGTGCGCTT 151 AAATTCGCCC GCCGTCATCA CATCCACATC
AATATCATGT TTTTTCAACA 201 GGCGGTGGAT ATTCGGTACT TCCGCCACCA
CACCCACCGA ACCGACAATC 251 GCAAACGGAG CGGAAGCAAT TTTATCCGCC
ACACACGCCA TCATATAACC 301 GCCGCTCGCC GCCACCTTAT CGACGGCGAC
GGTCAGCGGA ATATTGCGTT 351 CGCGCAAACG CyTAAGCTGC GAAGCCGCCA
AACCGTAACC GTGAACCACG 401 CCGCCCGGAC TTTCCAATCT GAGCAGAACC
TCATCTTCAG GCTTGGCAAT 451 CAAAAGCACC GCCGTAATCT CATGACGCAA
GGATTCTACG GCGTGTGCAT 501 ACAAATCGCC GTCAAAATCC AACACAAAAA
GGCGGGATTT TTGCGTTTCG 551 GCAGATTTCT CCCCACCCTC CTTCAAACGC
TTTTTCTCTG CTTTGGCTTC 601 CGCCTTTTCC TTTTTCTTTT CCTCTTTTTC
CTGATGTTTT GCCTCTTCCC 651 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 84; ORF
012-1>:
TABLE-US-00199 m012-1.pep 1 MLARCHFLNI QLRAVLADKL LEQLMRFLQF
LSEFLFALFR IFTHKSNRAL 51 KFARRHHIHI NIMFFQQAVD IRYFRHHTHR
TDNRKRSGSN FIRHTRHHIT 101 AARRHLIDGD GQRNIAFAQT XKLRSRQTVT
VNHAARTFQS EQNLIFRLGN 151 QKHRRNLMTQ GFYGVCIQIA VKIQHKKAGF
LRFGRFLPTL LQTLFLCFGF 201 RLFLFLFLFF LMFCLFPA* m012-1/g012 91.7%
identity in 218 aa overlap 10 20 30 40 50 60 m012-1.pep
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI ||||
:|:||| ||::|||||||||||||| |||||||||||||||||||||||||||| g012
MLARRYFFNIQPGAVFTDKLLEQLMRFLQFLPEFLFALFRIFTHKSNRALKFARRHHIHI 10 20
30 40 50 60 70 80 90 100 110 120 m012-1.pep
NIMFFQQAVDIRYFRHHTHRTDNRKRSGSNFIRHTRHHITAARRHLIDGDGQRNIAFAQT
||||||||||||:|||||||||:|||||:||||||||||:|| | ||||||||||||||| g012
NIMFFQQAVDIRHFRHHTHRTDDRKRSGNNFIRHTRHHIAAACRDLIDGDGQRNIAFAQT 70 80
90 100 110 120 130 140 150 160 170 180 m012-1.pep
XKLRSRQTVTVNHAARTFQSEQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g012
PKLRSRQTVTVNHAARTFQSEQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF 130
140 150 160 170 180 190 200 210 219 m012-1.pep
LRFGRFLPTLLQTLFLCFGFRLFLFLFLFFLMFCLFPAX
||||||||:||||||||||||||||||:|||||||| || g012
LRFGRFLPALLQTLFLCFGFRLFLFLFFFFLMFCLFLAX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 85>:
TABLE-US-00200 a012-1.seq 1 ATGCTCGCCC GTTGCCACTT CCTCAATATC
CAATTGAGGG CGGTTCTCGC 51 TGACAAACTG CTTGAACAAC TGATGCGTTT
CCTCCAGTTC CTGTCGGAAT 101 TTCTGTTTGC CCTTTTCCGT ATTTTCACCC
ATAAAAGTAA CCGTGCGCTT 151 AAATTCGCCC GCCGTCATCA CATCCACATC
AATATCATGT TTTTTCAACA 201 GGCGGTGGAT ATTCGGTACT TCCGCTACAA
CACCCACCGA ACCGACAATC 251 GCAAACGGAG CGGAAACAAT TTTATCCGCC
ACACACGCCA TCATATAACC 301 ACCGCTCGCC GCCACCTTAT CGACGGCGAC
GGTCAGCGGA ATATTGCGTT 351 CGCGCAAACG CCTAAGCTGC GAAGCCGCCA
AACCGTAACC GTGAACCACG 401 CCGCCCGGAC TTTCCAATCT AAGCAGAACC
TCATCTTCAG GCTTGGCAAT 451 CAAAAGCACC GCCGTAATCT CATGACGCAA
GGATTCTACG GCGTGTGCAT 501 ACAAATCGCC GTCAAAATCC AACACAAAAA
GGCGGGATTT TTGCGTTTCG 551 GAAGATTTCT CCCCACCCTC CTTCAAACGC
TTTTTCTCTG CTTTGGCTTC 601 CGCCTTTTCC TTTTTCTTTT CCTCTTTTTC
CTGATGTTTT GCCTCTTCCC 651 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 86; ORF
012-1.a>:
TABLE-US-00201 a012-1.pep 1 MLARCHFLNI QLRAVLADKL LEQLMRFLQF
LSEFLFALFR IFTHKSNRAL 51 KFARRHHIHI NIMFFQQAVD IRYFRYNTHR
TDNRKRSGNN FIRHTRHHIT 101 TARRHLIDGD GQRNIAFAQT PKLRSRQTVT
VNHAARTFQS KQNLIFRLGN 151 QKHRRNLMTQ GFYGVCIQIA VKIQHKKAGF
LRFGRFLPTL LQTLFLCFGF 201 RLFLFLFLFF LMFCLFPA* a012-1/m012-1 97.2%
identity in 218 aa overlap 10 20 30 40 50 60 a012-1.pep
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m012-1
MLARCHFLNIQLRAVLADKLLEQLMRFLQFLSEFLFALFRIFTHKSNRALKFARRHHIHI 10 20
30 40 50 60 70 80 90 100 110 120 a012-1.pep
NIMFFQQAVDIRYFRYNTHRTDNRKRSGNNFIRHTRHHITTARRHLIDGDGQRNIAFAQT
|||||||||||||||::|||||||||||:|||||||||||:||||||||||||||||||| m012-1
NIMFFQQAVDIRYFRHHTHRTDNRKRSGSNFIRHTRHHITAARRHLIDGDGQRNIAFAQT 70 80
90 100 110 120 130 140 150 160 170 180 a012-1.pep
PKLRSRQTVTVNHAARTFQSKQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF
|||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| m012-1
XKLRSRQTVTVNHAARTFQSEQNLIFRLGNQKHRRNLMTQGFYGVCIQIAVKIQHKKAGF 130
140 150 160 170 180 190 200 210 219 a012-1.pep
LRFGRFLPTLLQTLFLCFGFRLFLFLFLFFLMFCLFPAX
||||||||||||||||||||||||||||||||||||||| m012-1
LRFGRFLPTLLQTLFLCFGFRLFLFLFLFFLMFCLFPAX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 87>:
TABLE-US-00202 g013.seq 1 aTgcctttga ccatgctgtg cagcaGGAcg
tGCGGTTtgt tcataataca 51 gtCcgaccGG AAAagcggAG GAAaCGCAGT
GCCGCGCCCT TCCCCTTTCT 101 TGCCGTGGCA GGCGATGCag tTgGATTCGT
ACACTTTTTG CCCTTTtGtc 151 atgatGCTgt tgtcggCGGC AGAAGCgGCG
GcgCAGAGGC AGCACAAGAT 201 GAAGGCGGTC GGCAGTCGGG TTGTGTtcat
tGgcgTTTCC cctaatgttt 251 tgaaaccttg ttttttgatt Ttgcctttac
ggggtgaaaa gtttttTtgg 301 cccaaatccg gaatttag
This corresponds to the amino acid sequence <SEQ ID 88; ORF
013.ng:
TABLE-US-00203 g013.pep 1 MPLTMLCSRT CGLFIIQSDR KSGGNAVPRP
SPFLPWQAMQ LDSYTFCPFV 51 MMLLSAAEAA AQRQHKMKAV GSRVVFIGVS
PNVLKPCFLI LPLRGEKFFW 101 PKSGI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 89>:
TABLE-US-00204 m013.seq 1 ATGCCTTTGA CCATGCTGTG CAGCAGCACC
TGCGGTTTTT TCATGATGAA 51 GTCGGAGCGG TAGAGCGGCG GAAACATGGT
TCCGCGGCCT TCGCCCTTTT 101 TGCCGTGGCA GGCGACGCAG TTGGATTCGT
ACACTTTTTG CCCTTTTGTC 151 ATGATGCTGT TGTCGGCGGC AGAAGCGGCG
GCGCAGAAGC AGCCCAAGAC 201 GAGGGCGGTC GGCAGTCGGG TTGTGTTCAT
TGGTGTTTCC TTCATGTTTG 251 AAACCTTGTT GTTGATTTTG CGTAGCGGGT
GAAAGATTTT TTTGCCGAAT 301 CAGTAG
This corresponds to the amino acid sequence <SEQ ID 90; ORF
013>:
TABLE-US-00205 m013.pep 1 MPLTMLCSST CGFFMMKSER XSGGNMVPRP
SPFLPWQATQ LDSYTFCPFV 51 MMLLSAAEAA AQKQPKTRAV GSRVVFIGVS
FMFETLLLIL RSGXKIFLPN 101 Q*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 91>:
TABLE-US-00206 a013.seq 1 ATGCCTTTGA CCATGCTGTG CAGCAGCACC
TGCGGTTTTT TCATGATGAA 51 GTCGGAGCGG TAGAGCGGCG GAAACATGGT
TCCGCGGCCT TCGCCCTTTT 101 TGCCGTGGCA GGCGACGCAG TTGGATTCGT
ACACTTTTTG CCCTTTTGTC 151 ATGATGCTGT TGTCGGCGGC AGAAGCGGCG
GCGCAGAGGC AGCCCAAGAC 201 GAGGGCGGTC GGCAGTCGGG TTGTGTTCAT
TGGTGTTTCC TTAATGTTTG 251 AAACCTTGTT GTTGATTTTG CGTAGCGGGT
GAAAGATTTT CTTGCCGAAT 301 CGGTAG
This corresponds to the amino acid sequence <SEQ ID 92; ORF
013.a>:
TABLE-US-00207 a013.pep 1 MPLTMLCSST CGFFMMKSER *SGGNMVPRP
SPFLPWQATQ LDSYTFCPFV 51 MMLLSAAEAA AQRQPKTRAV GSRVVFIGVS
LMFETLLLIL RSG*KIFLPN 101 R* m013/a013 97.0% identity over a 101 aa
overlap 10 20 30 40 50 60 m013.pep
MPLTMLCSSTCGFFMMKSERXSGGNMVPRPSPFLPWQATQLDSYTFCPFVMMLLSAAEAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a013
MPLTMLCSSTCGFFMMKSERXSGGNMVPRPSPFLPWQATQLDSYTFCPFVMMLLSAAEAA 10 20
30 40 50 60 70 80 90 100 m013.pep
AQKQPKTRAVGSRVVFIGVSFMFETLLLILRSGXKIFLPNQX
||:|||||||||||||||||:|||||||||||||||||||:| a013
AQRQPKTRAVGSRVVFIGVSLMFETLLLILRSGXKIFLPNRX 70 80 90 100
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 013
shows 73.3% identity over a 101 aa overlap with a predicted ORF
(ORF 013.ng) from N. gonorrhoeae:
TABLE-US-00208 m013/g013 10 20 30 40 50 60 m013.pep
MPLTMLCSSTCGFFMMKSERXSGGNMVPRPSPFLPWQATQLDSYTFCPFVMMLLSAAEAA
|||||||| |||:|:::|:| |||| |||||||||||| ||||||||||||||||||||| g013
MPLTMLCSRTCGLFIIQSDRKSGGNAVPRPSPFLPWQAMQLDSYTFCPFVMMLLSAAEAA 10 20
30 40 50 60 70 80 90 100 m013.pep
AQKQPKTRAVGSRVVFIGVSF-MFETLLLILR-SGXKIFLPNQX ||:| | :||||||||||||
::: :||| | |:| |: g013
AQRQHKMKAVGSRVVFIGVSPNVLKPCFLILPLRGEKFFWPKSGIX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 93>:
TABLE-US-00209 g015.seq 1 ATGCAGTATC TGATTGTCAA ATACAGCCAT
CAAATCTTCG TTACCATCAC 51 CATTTTGGTA TTCAACATCC GTTTTTTCCT
ACTTTGGAAA AATCCAGAAA 101 AGCCCTTGGT CGGCTTTTGG AAAGCACTGC
CCCACCTCAA CGACACGATG 151 CTGCTGTTTA CGGGATTGTG GCTGATGAAG
ATTACCCATT TCTCCCCGTT 201 CAACGCGCCT TGGCTCGGCA CAAAAATCCT
GCTCCTGTTC GCCTACATCG 251 CACTGGGCAT GGTAATGATG CGCGCCCGTC
CGCGTTCGAC CAAGTTCTAC 301 ACCGTTTACC TGCTCGCTAT GTGTTGCATC
GCCTGCATCG TTTACCTTGC 351 CAAAACCAAA GTCCTGCCAT TCTGA
This corresponds to the amino acid sequence <SEQ ID 94; ORF
015.ng>:
TABLE-US-00210 g015.pep 1 MQYLIVKYSH QIFVTITILV FNIRFFLLWK
NPEKPLVGFW KALPHLNDTM 51 LLFTGLWLMK ITHFSPFNAP WLGTKILLLF
AYIALGMVMM RARPRSTKFY 101 TVYLLAMCCI ACIVYLAKTK VLPF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 95>:
TABLE-US-00211 m015.seq (partial) 1 ..AAAATCAGAA AAGCCTTGGC
GGGCTTTTGG AAGGCACTGC CCCACCTTAA 51 CGACACCATG CTGCTGTTTA
CGGGATTGTG GCTGATGAAA ATTACCCATT 101 TCTCCCCGTT CAACGCGCCT
TGGCTCGGTA CAAAAATCCT GCTTCTGCTC 151 GCCTATATCG CATTGGGTAT
GATGATGATG CGCGCCCGTC CGCGTTCGAC 201 CAAGTTCTAC ACCGTTTACC
TGCTCGCCAT GTGTTGCGTC GCCTGCATCG 251 TTTACCTTGC CAAAACCAAA
GTCCTGCCTT TCTGA
This corresponds to the amino acid sequence <SEQ ID 96; ORF
015:
TABLE-US-00212 m015.pep (partial) 1 ..KIRKALAGFW KALPHLNDTM
LLFTGLWLMK ITHFSPFNAP WLGTKILLLL 51 AYIALGMMMM RARPRSTKFY
TVYLLAMCCV ACIVYLAKTK VLPF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 97>:
TABLE-US-00213 a015.seq 1 ATGCAGTATC TGATTGTCAA ATACAGCCAT
CAAATCTTCG TTACCATCAC 51 CATTTTGGTA TTCAACATCC GTGTTTTCNT
ACTTTGGAAA AATCCAGAAA 101 AGCCCTTGGC GGGCTTTTGG AAGGCACTGC
CCCACCTTAA CGACACCATG 151 CTGCTGTTTA CGGGATTGTG GCTGATGAAA
ATTACCCATT TCTCCCCGTT 201 CAACGCGCCT TGGCTCGGTA CAAAAATCCT
GCTTCTGCTC GCCTATATCG 251 CATTGGGTAT GATGATGATG CGCGCCCGTC
CGCGTTCGAC CAAGTTCTAC 301 ACCGTTTACC TGCTCGCCAT GTGTTGCCTC
ACCTGCATCG TTTACCTTGC 351 CAAAACCAAA GTCCTGCCTT TCTGA
This corresponds to the amino acid sequence <SEQ ID 98; ORF
015.a>:
TABLE-US-00214 a015.pep 1 MQYLIVKYSH QIFVTITILV FNIRVFXLWK
NPEKPLAGFW KALPHLNDTM 51 LLFTGLWLMK ITHFSPFNAP WLGTKILLLL
AYIALGMMMM RARPRSTKFY 101 TVYLLAMCCL TCIVYLAKTK VLPF* m015/a015
96.7% identity over a 91 aa overlap 10 20 30 m015.pep
KIRKALAGFWKALPHLNDTMLLFTGLWLMKITH | ||||||||||||||||||||||||||||
a015 LIVKYSHQIFVTITILVFNIRVFXLWKNPEKPLAGFWKALPHLNDTMLLFTGLWLMKITH
10 20 30 40 50 60 40 50 60 70 80 90 m015.pep
FSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTVYLLAMCCVACIVYLAKTKVLP
||||||||||||||||||||||||||||||||||||||||||||||::|||||||||||| a015
FSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTVYLLAMCCLTCIVYLAKTKVLP 70 80
90 100 110 120 m015.pep FX || a015 FX
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 015
shows 94.5% identity over a 91 aa overlap with a predicted ORF (ORF
015.ng) from N. gonorrhoeae:
TABLE-US-00215 m015/g015 10 20 30 m015.pep
KIRKALAGFWKALPHLNDTMLLFTGLWLMKITH | |:||||||||||||||||||||||||||
g015 LIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALPHLNDTMLLFTGLWLMKITH
10 20 30 40 50 60 40 50 60 70 80 90 m015.pep
FSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTVYLLAMCCVACIVYLAKTKVLP
||||||||||||||||:|||||||:|||||||||||||||||||||:||||||||||||| g015
FSPFNAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTVYLLAMCCIACIVYLAKTKVLP 70 80
90 100 110 120 m015.pep FX || g015 FX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 99>:
TABLE-US-00216 g018.seq 1 atGCAGCAGG GGCagttggt tggacgcgtc
gcccgcaata AAGATATGCG 51 GAATgctggt CTGCATggtC AGCGGATCGG
CAACGGGtac gccgcgcgcg 101 tctttgTCGA TATTGATGTT TTCCAAACCG
ATATtgTCAA CGTTCGGACG 151 GCgACCTACG GCTGCCAACA TATATTCGGC
AACAAATACG CCTTTTTCGC 201 CATCCTGCTC CCAATGGACT tctACATTGC
CGTCTGCGTC GAGTTTGACC 251 TCGGTTTTAG CATCCAGATG CAGTTTCAAT
tctTCTCCGA ACACGGCTTT 301 CGCCTCGTCT GA
This corresponds to the amino acid sequence <SEQ ID 100; ORF
018.ng>:
TABLE-US-00217 g018.pep 1 MQQGQLVGRV ARNKDMRNAG LHGQRIGNGY
AARVFVDIDV FQTDIVNVRT 51 ATYGCQHIFG NKYAFFAILL PMDFYIAVCV
EFDLGFSIQM QFQFFSEHGF 101 RLV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 101>:
TABLE-US-00218 m018.seq 1 ATGCAGCAGA GGCAGTTGGT TGGACGCATC
GCCTGCGATG AAGATATGCG 51 GAATACTGGT CTGCATGGTC AGCGGGTCGG
CAACAGGTAC GCCGCGCGCA 101 TCTTTTTCGA TATTGATATT TTCCAAACCG
ATATTGTCAA CGTTCGGACG 151 GCGGCCCACG GCTGCCAGCA TATATTCGGC
AACAAATACG CCTTTTTCGC 201 CATCCTGCTC CCAATGGACT TCTACATTGC
CGTCTGCATC GAGTTTGACC 251 TCGGTTTTAG CATCCAGATG CAGTTTCAAT
TCTTCGCCGA ACACGGCGTT 301 CGCCTCGTCT GA
This corresponds to the amino acid sequence <SEQ ID 102; ORF
018>:
TABLE-US-00219 m018.pep 1 MQQRQLVGRI ACDEDMRNTG LHGQRVGNRY
AARIFFDIDI FQTDIVNVRT 51 AAHGCQHIFG NKYAFFAILL PMDFYIAVCI
EFDLGFSIQM QFQFFAEHGV 101 RLV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 103>:
TABLE-US-00220 a018.seq 1 ATGCAGCAGG GGCAGTTGGT TGGACGCGTC
GCCCGCAATA AAGATATGCG 51 GAATACTGGT CTGCATAGTC AGCGGATCGG
CAACGGGTAC GCCGCGCGCA 101 TCTTTTTCGA TATTGATGTT TTCCAAACCG
ATATTGTCAA CGTTCGGACG 151 GCGGCCTACG GCTGCCAGCA TATATTCGGC
AACAAATACG CCTTTTTCGC 201 CATCCTGCTC CCAATGGACT TCTACATTGC
CGTCTGCGTC GAGTTTGGCC 251 TCGGTTTTAG CATCCAAATG CAGTTTCAAT
TCTTCACCGA ACACGGCTTT 301 CGCCTCGTCT GA
This corresponds to the amino acid sequence <SEQ ID 104; ORF
018.a>:
TABLE-US-00221 a018.pep 1 MQQGQLVGRV ARNKDMRNTG LHSQRIGNGY
AARIFFDIDV FQTDIVNVRT 51 AAYGCQHIFG NKYAFFAILL PMDFYIAVCV
EFGLGFSIQM QFQFFTEHGF 101 RLV* m018/a018 86.4% identity over a 103
aa overlap 10 20 30 40 50 60 m018.pep
MQQRQLVGRIACDEDMRNTGLHGQRVGNRYAARIFFDIDIFQTDIVNVRTAAHGCQHIFG |||
|||||:| ::||||||||:||:|| ||||||||||:||||||||||||:||||||| a018
MQQGQLVGRVARNKDMRNTGLHSQRIGNGYAARIFFDIDVFQTDIVNVRTAAYGCQHIFG 10 20
30 40 50 60 70 80 90 100 m018.pep
NKYAFFAILLPMDFYIAVCIEFDLGFSIQMQFQFFAEHGVRLVX |||||||||||||||||||:||
||||||||||||:||| |||| a018
NKYAFFAILLPMDFYIAVCVEFGLGFSIQMQFQFFTEHGFRLVX 70 80 90 100
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 018
shows 84.5% identity over a 103 aa overlap with a predicted ORF
(ORF 018.ng) from N. gonorrhoeae:
TABLE-US-00222 m018/g018 10 20 30 40 50 60 m018.pep
MQQRQLVGRIACDEDMRNTGLHGQRVGNRYAARIFFDIDIFQTDIVNVRTAAHGCQHIFG |||
|||||:| ::||||:||||||:|| ||||:| |||:|||||||||||::||||||| g018
MQQGQLVGRVARNKDMRNAGLHGQRIGNGYAARVFVDIDVFQTDIVNVRTATYGCQHIFG 10 20
30 40 50 60 70 80 90 100 m018.pep
NKYAFFAILLPMDFYIAVCIEFDLGFSIQMQFQFFAEHGVRLVX
|||||||||||||||||||:|||||||||||||||:||| |||| g018
NKYAFFAILLPMDFYIAVCVEFDLGFSIQMQFQFFSEHGFRLVX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 105>:
TABLE-US-00223 g019.seq (partial) 1 ..ctgctggcgg ccctggtgct
tgccgcgtgt tcttcgACAA ACAcacTGCC 51 AGCCGGCAAG ACCCCGGCAG
ACAATATAGA AActgcCgAC CTTTCGGCAA 101 GCGTTCCCAC ccgcCCTGCC
GAACCGGAAG GAAAAACGCT GGCAGATTAC 151 GGCGGCTACC CGTCCGCACT
GGATGCAGTG AAACAGAACA ACGATGCGGC 201 AGCCGCCGCC TATTTGGAAA
Acgcaggaga cagCGcgatg gcGGAAAatg 251 tccgcaagga gtgGCTGa
This corresponds to the amino acid sequence <SEQ ID 106; ORF
019.ng>:
TABLE-US-00224 g019.pep (partial) 1 ..LLAALVLAAC SSTNTLPAGK
TPADNIETAD LSASVPTRPA EPEGKTLADY 51 GGYPSALDAV KQNNDAAAAA
YLENAGDSAM AENVRKEWL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 107>:
TABLE-US-00225 m019.seq (partial) 1 ATGTACCTAC CCTCTATGAA
GCATTCCCTG CCGCTGCTGG CGGCCCTGGT 51 GCTTGCCGCG TGTTCTTCGA
CAAACACACT GCCAGCCGGC AAGACCCCGG 101 CAGACAATAT AGAAACTGCC
GACCTTTCGG CAAGCGTTCC CACCCGCCCT 151 GCCGAACCCG AAAGAAAAAC
GCTGGCAGAT TACGGCGGCT ACCCGTCCGC 201 ACTGGATGCA GTGAAACAGA
AAAACGATGC CGCCGTCGCC GCCTATTTGG 251 AAAACGCCGG CGACAGCGCG
ATGGCGGAAA ATGTCCGCAA CGAGTGGCTG 301 AAGTCTTTGG GCGCACGCAG
ACAGTGGACG CTGTTTGCAC AGGAATACGC 351 CAAACTCGAA CCGGCAGGGC
GCGCCCAAGA AGTCGAATGC TACGCCGATT 401 CGAGCCGCAA CGACTATACG
CGTGCCGCTG AACTGGTCAA AAATACGGGC 451 AAACTGCCTT CGGGCTGCAC
CAAACTGTTG GAACAGGCAG CCGCATCCGG 501 CTTGTTGGAC GGCAACGACG
CCTGGAGGCG CGTGCGCGGA CTGCTGGCCG 551 GCCGCCAAAC CACAGACGCA
CGCAACCTTG CCGCCGCATT GGGCAGCCCG 601 TTTGACGGCG GTACACAAGG
TTCGCGCGAA TATGCCCTGT TGAACGTCAT 651 CGGCAAAGAA GCACGCAAAT
CGCCGAATGC CGCCGCCCTG CTGTCCGAAA 701 TGGAAAGCGG TTTAAGCCTC
GAACAACGCA GTTTCGCGTG GGGCGTATTG 751 GGGCATTATC AGTCGCAAAA
CCTCAATGTG CCTGCCGCCT TGGACTATTA 801 CGGCAAGGTT GCCGACCGCC
GCCAACTGAC CGACGACCAA ATCGAGTGGT 851 ACGCCCGCGC CGCCTTGCGC
GCCCGACGTT GGGACGAGCT GGCCTCCGTT 901 ATCTCGCATA TGCCCGAAAA
ACTGCAAAAA AGCCCGACCT GGCTCTACTG 951 GCTGGCACGC AGCCGCGCCG
CAACGGGCAA CACGCAAGAG GCGGAAAAAC 1001 TTTACAAACA GGCGGCAGCG
ACGGGCAGGA ATTTTTATGC GGTGCTGGCA 1051 GGGGAAGAAT TGGGTCGGAA
AATCGATACG CGCAACAATG TGCCCGATGC 1101 CGGCAAAAAC AGCGTCCGCC
GCATGGCGGA AGACGGTGCA GTCAAACGCG 1151 CACTGGTACT GTTCCAAAAC
AGCCAATCTG CCGGTGATGC AAAAATGCGC 1201 CGTCAGGCTC AGGCGGAATG
GCGTTTTGCC ACACGCGGCT TTGACGAAGA 1251 CAAGCTGCTG ACCGCCGCGC
AAACCGCGTT CGACCACGGT TTTTACGATA 1301 TGGCGGTCAA CAGCGCGGAA
CGCACCGACC GCAAACTCAA CTACACCTTG 1351 CGCTATATTT CGCCGTTTAA
AGACACGGTA ATCCGCCACG CGCAAAATGT 1401 TAATGTCGAT CCGGCTTGGG
TTTATGGGCT GATTCGTCAG GAAAGCCGCT 1451 TCGTTATAGG CGCGCAATCC
CGCGTAGGCG CGCAGGGGCT GATGCAGGTT 1501 ATGCCTGCCA CCGCGCGCGA
AATCGCCGGC AAAATCGGTA TGGATGCCGC 1551 ACAACTTTAC ACCGCCGACG
GG...
This corresponds to the amino acid sequence <SEQ ID 108; ORF
019>:
TABLE-US-00226 m019.pep (partial) 1 MYLPSMKHSL PLLAALVLAA
CSSTNTLPAG KTPADNIETA DLSASVPTRP 51 AEPERKTLAD YGGYPSALDA
VKQKNDAAVA AYLENAGDSA MAENVRNEWL 101 KSLGARRQWT LFAQEYAKLE
PAGRAQEVEC YADSSRNDYT RAAELVKNTG 151 KLPSGCTKLL EQAAASGLLD
GNDAWRRVRG LLAGRQTTDA RNLAAALGSP 201 FDGGTQGSRE YALLNVIGKE
ARKSPNAAAL LSEMESGLSL EQRSFAWGVL 251 GHYQSQNLNV PAALDYYGKV
ADRRQLTDDQ IEWYARAALR ARRWDELASV 301 ISHMPEKLQK SPTWLYWLAR
SRAATGNTQE AEKLYKQAAA TGRNFYAVLA 351 GEELGRKIDT RNNVPDAGKN
SVRRMAEDGA VKRALVLFQN SQSAGDAKMR 401 RQAQAEWRFA TRGFDEDKLL
TAAQTAFDHG FYDMAVNSAE RTDRKLNYTL 451 RYISPFKDTV IRHAQNVNVD
PAWVYGLIRQ ESRFVIGAQS RVGAQGLMQV 501 MPATAREIAG KIGMDAAQLY
TADG...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 109>:
TABLE-US-00227 a019.seq 1 ATGTACCCAC CCTCTCTGAA GCATTCCCTG
CCGCTGCTGG TGGNCCTGGT 51 GCTTGCCGCG TGTTCTTNGA CAAACACACT
GTCAGCCGAC AAGACCCCGG 101 CAGACAATAT AGAAACTGCC GACCTTTCGG
CAAGCGTTCC CACCNGCCCT 151 GCCGAACCCG AANGAAAAAC GTNGGCAGAT
TACGGCGGCT ACCCGTCCGC 201 ACTGGATGCA GTGAAACAGA AAAACGATGC
CGCCGTCGCC GCCTATTTGG 251 AAAACGCCGG CGACAGCGCG ATGGCGGAAA
ATGTCCGCAA CGAGTGGCTG 301 AAGTCTTTGG GCGCGCGCAG ACAGTGGACG
CTGTNTGCAC ANGAATATGC 351 NAAACTCGAA CCGGCANGGC GCGCCCAAGA
AGTCGAATGC TACGCCGATT 401 CGAGCCGCAA CGACTATACG CGTGCCGCCG
AACTGGTCAA AAATACGGGC 451 AAACTGCCTT CGGGCTGCAC CAAACTGTTG
GAACAGGCAG CCGCATCCGG 501 CTTGTTGGAC GGCAACGACG CCTGGAGGCG
CGTGCGCGGA CTGCTGGCCG 551 GCCGCCAAAC CACAGACGCA CGCAACCTTG
CCGCCGCATT GGGCAGCCCG 601 TTTGACGGCG GTACACAAGG TTCGCGCGAA
TATGCCCTGT TGAACGTCAT 651 CGGCAAAGAA GCACGCAAAT CGCCGAATGC
CGCCGCCCTG CTGTCCGAAA 701 TGGAAAGCGG TTTAAGCCTC GAACAACGCA
GTTTCGCGTG GGGCGTATTG 751 GGGCATTATC AGTCGCAAAA CCTCAATGTG
CCTGCCGCCT TGGACTATTA 801 NGGCAAGGTT GCCGACCGCC GCCAACTGAC
CGACGACCAA ATCGAGTGGT 851 ACGCCCGCGC CGCNNTNNGC NNNCGNNGTT
NGNANGANNT GGCNNCCGNN 901 ANCNCGNNNN TGCNNGANAA ACNNNNNNAN
AGNCNNANNT NGNTNNANTG 951 NNTGGCACGC AGCCGCGCCG CNACGGGCAA
CACGCAANAN GCGGANAAAC 1001 TNTACAAACA GGCGGCAGCA NCGGGCANGA
ATTTTTATGC NGTGCTGNCN 1051 GGGGAAGAGT TGGGGCGCAN AATCGATACG
CGCAACAATG TGCCCGATGC 1101 CGGCAAAANC AGCGTCCTCC GTATGGCGGA
AGACGGCGCG ATTAAGCGCG 1151 CGCTGGTGCT GTTCCGAAAC AGCCGAACCG
CCGGCGATGC GAAAATGCGC 1201 CGTCNGGCTC AGGCGGAATG GCGTTTCGCC
ACACGCGGCT TCGATGAAGA 1251 CAAGCTGCTG ACCGCCGCGC AAACCGCGTT
CGACCACGGT TTTTACGATA 1301 TGGCGGTCAA CAGCGCGGAA CGCACCGACC
GCAAACTCAA CTACACCTTG 1351 CGCTACATTT CGNNNNNTNA NGACACGGTA
ATCCGCCACG CGCAAAATGT 1401 TAATGTCGAT CCGGCGTGGG TTTACGGGCT
GATTCGTCAG GAAAGCCGCT 1451 TCGTTATGGG CGCGCAATCC CGCGTAGGCG
CGCAGGGGCT GATGCAGGTT 1501 ATGCCTGCCA CCGCGCGCGA AATCGCCGGC
AAAATCGGTA TGGATGCCGC 1551 ACAACTTTAC ACCGCCGACG GCAATATCCG
TATGGGGACG TGGTATATGG 1601 CGGACACCAA ACGCCGCCTG CAAAACAACG
AAGTCCTCGC CACCGCAGGC 1651 TATAACGCCG GTCCCGGCAG GGCGCGCCGA
TGGCAGGCGG ACACGCCCCT 1701 CGAAGGCGCG GTATATGCCG AAACCATCCC
GTTTTCCGAA ACGCGCGACT 1751 ATGTCAAAAA AGTGATGGCC AATGCCGCCT
ACTACGCCTC CCTCTTCGGC 1801 GCGCCGCACA TCCCGCTCAA ACAGCGTATG
GGCATTGTCC CCGCCCGCTG 1851 A
This corresponds to the amino acid sequence <SEQ ID 110; ORF
019.a>:
TABLE-US-00228 a019.pep 1 MYPPSLKHSL PLLVXLVLAA CSXTNTLSAD
KTPADNIETA DLSASVPTXP 51 AEPEXKTXAD YGGYPSALDA VKQKNDAAVA
AYLENAGDSA MAENVRNEWL 101 KSLGARRQWT LXAXEYAKLE PAXRAQEVEC
YADSSRNDYT RAAELVKNTG 151 KLPSGCTKLL EQAAASGLLD GNDAWRRVRG
LLAGRQTTDA RNLAAALGSP 201 FDGGTQGSRE YALLNVIGKE ARKSPNAAAL
LSEMESGLSL EQRSFAWGVL 251 GHYQSQNLNV PAALDYXGKV ADRRQLTDDQ
IEWYARAAXX XRXXXXXAXX 301 XXXXXXKXXX XXXXXXXXAR SRAATGNTQX
AXKLYKQAAA XGXNFYAVLX 351 GEELGRXIDT RNNVPDAGKX SVLRMAEDGA
IKRALVLFRN SRTAGDAKMR 401 RXAQAEWRFA TRGFDEDKLL TAAQTAFDHG
FYDMAVNSAE RTDRKLNYTL 451 RYISXXXDTV IRHAQNVNVD PAWVYGLIRQ
ESRFVMGAQS RVGAQGLMQV 501 MPATAREIAG KIGMDAAQLY TADGNIRMGT
WYMADTKRRL QNNEVLATAG 551 YNAGPGRARR WQADTPLEGA VYAETIPFSE
TRDYVKKVMA NAAYYASLFG 601 APHIPLKQRM GIVPAR* m019/a019 88.9%
identity over a 524 aa overlap 10 20 30 40 50 60 m019.pep
MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSASVPTRPAEPERKTLAD ||
||:|||||||: ||||||| |||| | |||||||||||||||||| ||||| || || a019
MYPPSLKHSLPLLVXLVLAACSXTNTLSADKTPADNIETADLSASVPTXPAEPEXKTXAD 10 20
30 40 50 60 70 80 90 100 110 120 m019.pep
YGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSLGARRQWTLFAQEYAKLE
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| a019
YGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSLGARRQWTLXAXEYAKLE 70 80
90 100 110 120 130 140 150 160 170 180 m019.pep
PAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLEQAAASGLLDGNDAWRRVRG ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a019
PAXRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLEQAAASGLLDGNDAWRRVRG 130
140 150 160 170 180 190 200 210 220 230 240 m019.pep
LLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGKEARKSPNAAALLSEMESGLSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a019
LLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGKEARKSPNAAALLSEMESGLSL 190
200 210 220 230 240 250 260 270 280 290 300 m019.pep
EQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLTDDQIEWYARAALRARRWDELASV
|||||||||||||||||||||||||| ||||||||||||||||||||| | | a019
EQRSFAWGVLGHYQSQNLNVPAALDYXGKVADRRQLTDDQIEWYARAAXXXRXXXXXAXX 250
260 270 280 290 300 310 320 330 340 350 360 m019.pep
ISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLYKQAAATGRNFYAVLAGEELGRKIDT | :
||||||||||| | ||||||||:| |||||| |||||| ||| a019
XXXXXXKXXXXXXXXXXXARSRAATGNTQXAXKLYKQAAAXGXNFYAVLXGEELGRXIDT 310
320 330 340 350 360 370 380 390 400 410 420 m019.pep
RNNVPDAGKNSVRRMAEDGAVKRALVLFQNSQSAGDAKMRRQAQAEWRFATRGFDEDKLL
||||||||| || |||||||:|||||||:||::|||||||| |||||||||||||||||| a019
RNNVPDAGKXSVLRMAEDGAIKRALVLFRNSRTAGDAKMRRXAQAEWRFATRGFDEDKLL 370
380 390 400 410 420 430 440 450 460 470 480 m019.pep
TAAQTAFDHGFYDMAVNSAERTDRKLNYTLRYISPFKDTVIRHAQNVNVDPAWVYGLIRQ
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| a019
TAAQTAFDHGFYDMAVNSAERTDRKLNYTLRYISXXXDTVIRHAQNVNVDPAWVYGLIRQ 430
440 450 460 470 480 490 500 510 520 m019.pep
ESRFVIGAQSRVGAQGLMQVMPATAREIAGKIGMDAAQLYTADG
|||||:|||||||||||||||||||||||||||||||||||||| a019
ESRFVMGAQSRVGAQGLMQVMPATAREIAGKIGMDAAQLYTADGNIRMGTWYMADTKRRL 490
500 510 520 530 540 a019
QNNEVLATAGYNAGPGRARRWQADTPLEGAVYAETIPFSETRDYVKKVMANAAYYASLFG 550
560 570 580 590 600
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 019
shows 95.5% identity over a 89 aa overlap with a predicted ORF (ORF
019.ng) from N. gonorrhoeae:
TABLE-US-00229 g019/m019 10 20 30 40 49 g019.pep
LLAALVLAACSSTNTLPAGKTPADNIETADLSASVPTRPAEPEGKTLAD
||||||||||||||||||||||||||||||||||||||||||| ||||| m019
MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSASVPTRPAEPERKTLAD 10 20
30 40 50 60 50 60 70 80 89 g019.pep
YGGYPSALDAVKQNNDAAAAAYLENAGDSAMAENVRKEWL
|||||||||||||:||||:|||||||||||||||||:||| m019
YGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSLGARRQWTLFAQEYAKLE 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 111>:
TABLE-US-00230 g023.seq 1 ATGGTAGAAC GTAAATTGAC CGGTGCCCAT
TACGGTTTGC GCGATTGGGT 51 AATGCAGCGT GCGACTGCGG TTATTATGTT
GATTTATACC GTTGCACTTT 101 TAGTGGTTCT ATTTGCCCTG CCTAAAGAAT
ATCCGGCATG GCAGGCATTT 151 TTTAGTCAAG CTTGGGTAAA AGTATTTACC
CAAGTGAGCT TTATCGCCGT 201 ATTCTTGCAC GCTTGGGTGG GTATCCGCGA
TTTGTGGATG GACTATATCA 251 AACCCTTCGG CGTGCGTTTG TTTTTGCAGG
TTGCCACCAT TGtctGGCTG 301 GTCGGCTGCC TCGTGTATTC AGTTAAAGTG
ATTTGGGGGT AA
This corresponds to the amino acid sequence <SEQ ID 112; ORF
023.ng>:
TABLE-US-00231 g023.pep 1 MVERKLTGAH YGLRDWVMQR ATAVIMLIYT
VALLVVLFAL PKEYPAWQAF 51 FSQAWVKVFT QVSFIAVFLH AWVGIRDLWM
DYIKPFGVRL FLQVATIVWL 101 VGCLVYSVKV IWG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 113>:
TABLE-US-00232 m023.seq 1 ATGGTAGAAC GTAAATTGAC CGGTGCCCAT
TACGGTTTGC GCGATTGGGT 51 GATGCAACGT GCGACTGCGG TTATTATGTT
GATTTATACC GTTGCACTTT 101 TAGTGGTTCT ATTTTCCCTG CCTAAAGAAT
ATTCGGCATG GCAGGCATTT 151 TTTAGTCAAA CTTGGGTAAA AGTATTTACC
CAAGTGAGCT TCATCGCCGT 201 ATTCTTGCAC GCTTGGGTGG GTATCCGCGA
TTTGTGGATG GACTATATCA 251 AACCCTTCGG CGTGCGTTTG TTTTTGCAGG
TTGCCACCAT CGTTTGGCTG 301 GTCGGCTGTC TCGTGTATTC AGTTAAAGTG
ATTTGGGGGT AA
This corresponds to the amino acid sequence <SEQ ID 114; ORF
023>:
TABLE-US-00233 m023.pep 1 MVERKLTGAH YGLRDWVMQR ATAVIMLIYT
VALLVVLFSL PKEYSAWQAF 51 FSQTWVKVFT QVSFIAVFLH AWVGIRDLWM
DYIKPFGVRL FLQVATIVWL 101 VGCLVYSVKV IWG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 115>:
TABLE-US-00234 a023.seq 1 ATGGTAGAAC GTAAATTGAC CGGTGCCCAT
TACGGTTTGC GGGATTGGGC 51 GATGCAACGT GCGACCGCGG TTATTATGTT
GATTTATACC GTTGCACTTT 101 TAGTGGTTCT ATTTGCTCTG CCTAAAGAAT
ATTCGGCATG GCAGGCATTT 151 TTTAGTCAAA CTTGGGTAAA AGTATTTACC
CAAGTGAGCT TCATCGCCGT 201 ATTCTTGCAC GCTTGGGTGG GTATCCGCGA
TTTGTGGATG GACTATATNA 251 AACCCTTCGG CGTGCGTTTG TTTTTGCAGG
TTGCCACCAT CGTCTGGCTG 301 GTCGGCTGCT TGGTGTATTC AATTAAAGTA
ATTTGGGGGT AA
This corresponds to the amino acid sequence <SEQ ID 116; ORF
023.a>:
TABLE-US-00235 a023.pep 1 MVERKLTGAH YGLRDWAMQR ATAVIMLIYT
VALLVVLFAL PKEYSAWQAF 51 FSQTWVKVFT QVSFIAVFLH AWVGIRDLWM
DYXKPFGVRL FLQVATIVWL 101 VGCLVYSIKV IWG* m023/a023 96.5% identity
over a 113 aa overlap 10 20 30 40 50 60 m023.pep
MVERKLIGAHYGLRDWVMQRATAVIMLIYIVALLVVLFSLPKEYSAWQAFFSQTWVKVFT
||||||||||||||||:|||||||||||||||||||||:||||||||||||||||||||| a023
MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALPKEYSAWQAFFSQTWVKVFT 10 20
30 40 50 60 70 80 90 100 110 m023.pep
QVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSVKVIWGX
|||||||||||||||||||||| ||||||||||||||||||||||||:|||||| a023
QVSFIAVFLHAWVGIRDLWMDYXKPFGVRLFLQVATIVWLVGCLVYSIKVIWGX 70 80 90 100
110
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 023
shows 97.3% identity over a 113 aa overlap with a predicted ORF
(ORF 023.ng) from N. gonorrhoeae:
TABLE-US-00236 g023/m023 10 20 30 40 50 60 g023.pep
MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALPKEYPAWQAFFSQAWVKVFT
||||||||||||||||||||||||||||||||||||||:||||| ||||||||:|||||| m023
MVERKLIGAHYGLRDWVMQRATAVIMLIYIVALLVVLFSLPKEYSAWQAFFSQTWVKVFT 10 20
30 40 50 60 70 80 90 100 110 g023.pep
QVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSVKVIWGX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m023
QVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVGCLVYSVKVIWGX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 117>:
TABLE-US-00237 g025.seq 1 ATGTTGAAAC AAAcgACACT TTTGGCAGCT
TGTACCGCCG TTGCCGCTCT 51 GTTGGGCGGT TGcgCCACCC AACAGCCTGC
TccTGTCATT GCAGGCAATT 101 CAGGTATGCA GACCGTATCG TCTGCGCCGG
TTTACAATCC TTATGGCGCA 151 ACGCCGTACA ATGCCGCTCC TGCCGCCAac
gatgcGCCgT ATGTGCCGCC 201 CGTGCAAact gcgccggttT ATTCGCCTCC
TGCTTATGTT CCGCcgtCTG 251 CACCTGCCGT TTCGGgtaca tatgtTCCTT
CTTACGCACC CgtcgACATC 301 aacgCGGCGa cgCataCTAT TGTGCGTGGC
GACACgGtgt acaACATTTc 351 caaAcgCtac CATATCTCTC AAGACGATTT
CCGTGCGTGG AACGGCATGA 401 CCGACAATAC GTTGAGCATC GGTCAGATTG
TTAAAGTCAA ACCGGCaggA 451 TATGCCGCAC CGAAAACCGC AGCCGTAGAA
AGCAGGCCCG CCGTACCGGC 501 TGCCGCGCAA ACCCCTGTGA AACCCGCCGC
gcaACCGCCC GTTCAGTCCG 551 CGCCGCAACC TGCCGCGCCC GCTGCGGAAA
ATAAAGCGGT TCCCGCCCCC 601 GCGCCCGCCC CGCAATCTCC TGCCGCTTCG
CCTTCCGGCA CGCGTTCGGT 651 CGGCGGCATT GTTTGGCAGC GTCCGACCCA
AGGTAAAGTG GTTGCCGATT 701 TCGGCGGCGG CAACAAGGGT GTCGATATTG
CCGGCAATGC CGGACAACCC 751 GTTTTGGCGG CGGCTGACGG CAAAGTGGTT
TATGCCGGTT CAGGTTTGAG 801 GGGATACGGA AACTTGGTCA TCATCCAGCA
CAATTCCTCT TTCCTGACCG 851 CGTACGGGCA CAACCAAAAA TTGCTGGTCG
GCGAAGGTCA GCAGGTCAAA 901 CGCGGTCAGC AGGTTGCTTT GATGGGTAAT
ACCGATGCTT CCAGAACGCA 951 GCTTCATTTC GAGGTGCGTC AAAACGGCAA
ACCGGTTAAC CCGAACAGCT 1001 ATATCGCGTT CTGA
This corresponds to the amino acid sequence <SEQ ID 118; ORF
025.ng>:
TABLE-US-00238 g025.pep 1 MLKQTTLLAA CTAVAALLGG CATQQPAPVI
AGNSGMQTVS SAPVYNPYGA 51 TPYNAAPAAN DAPYVPPVQT APVYSPPAYV
PPSAPAVSGT YVPSYAPVDI 101 NAATHTIVRG DTVYNISKRY HISQDDFRAW
NGMTDNTLSI GQIVKVKPAG 151 YAAPKTAAVE SRPAVPAAAQ TPVKPAAQPP
VQSAPQPAAP AAENKAVPAP 201 APAPQSPAAS PSGTRSVGGI VWQRPTQGKV
VADFGGGNKG VDIAGNAGQP 251 VLAAADGKVV YAGSGLRGYG NLVIIQHNSS
FLTAYGHNQK LLVGEGQQVK 301 RGQQVALMGN TDASRTQLHF EVRQNGKPVN
PNSYIAF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 119>:
TABLE-US-00239 m025.seq (partial) 1 ..GTGCCGCCGG TGCAAAGCGC
GCCGGTTTAT ACGCCTCCTG CTTATGTTCC 51 GCCGTCTGCA CCTGCCGTTT
CGGGTACATA CGTTCCTTCT TACGCACCCG 101 TCGACATCAA CGCGGCGACG
CATACTATTG TGCGCGGCGA CACGGTGTAC 151 AACATTTCCA AACGCTACCA
TATCTCTCAA GACGATTTCC GTGCGTGGAA 201 CGGCATGACC GACAATACGT
TGAGCATCGG TCAGATTGTT AAAGTCAAAC 251 CGGCAGGATA TGCCGCACCG
AAAGCCGCAG CCGTAAAAAG CAGGCCCGCC 301 GTACCGGCTG CCGCGCAACC
GCCCGTACAG TCCGCACCCG TCGACATTAA 351 CGCGGCGACG CATACTATTG
TGCGCGGCGA CACGGTGTAC AACATTTCCA 401 AACGCTACCA TATCTCTCAA
GACGATTTCC GTGCGTGGAA CGGCATGACC 451 GACAATATGT TGAGCATCGG
TCAGATTGTT AAAGTCAAAC CGGCAGGATA 501 TGCCGCACCG AAAACCGCAG
CCGTAGAAAG CAGGCCCGCC GTACCGGCTG 551 CCGTGCAAAC CCCTGTGAAA
CCCGCCGCGC AACCGCCTGT GCAGTCCGCG 601 CCGCAACCTG CCGCGCCCGC
TGCGGAAAAT AAAGCGGTTC CCGCGCCCGC 651 CCCGCAATCT CCTGCCGCTT
CGCCTTCCGG CACGCGTTCG GTCGGCGGCA 701 TTGTTTGGCA GCGTCCGACG
CAAGGTAAAG TGGTTGCCGA TTTCGGCGGC 751 AACAACAAGG GTGTCGATAT
TGCCGGTAAT GCGGGACAGC CCGTTTTGGC 801 GGCGGCTGAC GGCAAAGTGG
TTTATGCCGG TTCAGGTTTG AGGGGATACG 851 GAAACTTGGT CATCATCCAG
CATAATTCTT CTTTCCTGAC CGCATACGGG 901 CACAACCAAA AATTGCTGGT
CGGCGAGGGG CAGCAGGTCA AACGCGGTCA 951 GCAGGTTGCT TTGATGGGCA
ATACCGATGC TTCCAGAACG CAGCTTCATT 1001 TCGAGGTGCG TCAAAACGGC
AAACCGGTTA ACCCGAACAG CTATATCGCG 1051 TTCTGA
This corresponds to the amino acid sequence <SEQ ID 110; ORF
025>:
TABLE-US-00240 m025.pep (partial) 1 ..VPPVQSAPVY TPPAYVPPSA
PAVSGTYVPS YAPVDINAAT HTIVRGDTVY 51 NISKRYHISQ DDFRAWNGMT
DNTLSIGQIV KVKPAGYAAP KAAAVKSRPA 101 VPAAAQPPVQ SAPVDINAAT
HTIVRGDTVY NISKRYHISQ DDFRAWNGMT 151 DNMLSIGQIV KVKPAGYAAP
KTAAVESRPA VPAAVQTPVK PAAQPPVQSA 201 PQPAAPAAEN KAVPAPAPQS
PAASPSGTRS VGGIVWQRPT QGKVVADFGG 251 NNKGVDIAGN AGQPVLAAAD
GKVVYAGSGL RGYGNLVIIQ HNSSFLTAYG 301 HNQKLLVGEG QQVKRGQQVA
LMGNTDASRT QLHFEVRQNG KPVNPNSYIA 351 F*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 111>:
TABLE-US-00241 a025.seq 1 ATGTTGACAC CAACAACACT TTAGGTAGCT
TGTACCGCCC TTGCCGCTCA 51 GTTGGGCGGA TGCCCCACCC AACACCCTTC
TCCTGTCATT GCAGGCAATT 101 CAGGTATGCA GACCGTACCG TCTGCGCCGG
TTTACAATCC TTATGGCGCA 151 ACGCCGTACA ATGCCGCTCC TGCCGCCAAC
GATGCGCCGT ATGTGCCGCC 201 GGTGCAAAGC GCGCCGGTTT ATANGCCTCC
TGCTTATGTT CCGCCGTCTG 251 CACCTGCCGT TTCGGGTACA TACGTTCCTT
CTTACGCANC CGTCGACATC 301 AACGCGGCGA CCCATACTAT TGTGCGCGGC
GACACCGTGT ACAAGATTTC 351 CAAATGCTAC CATATCTCTC AAGACGATTT
CCGTGCGTGG AACGGCATGA 401 CCGACAATAC GTTGAGCATC GGTCAGATTG
TTAAAGTCAA ACCGGCAGGA 451 TATGCCGCAC CGAAAGCCGC AGCCGTAAAA
AGCAGGCCCG CCGTACCGGC 501 TGCCGCGCAA CCGCTCGTAC AGTCCGCACC
CGTCGACATC AACGCGGCGA 551 CGCATACTAT TGTGCGCGGC GACACGGTGT
ACAACATTTC CAAACGCTAC 601 CATATCTCTC AAGACGATTT CCGTGCGTGG
AACGGCATGA CCGACAATAC 651 GTTGAGCATC GGTCAGATTG TTAAAGTCAA
ACCGGCAGGA TATGCCGCAC 701 CGAAAGCCGC AGCCGTAAAA AGCAGGCCCG
CCGTACCGGC TGCCGTGCAA 751 ACCCCTGTGA AACCCGCCGC GCAACCGCCT
GTGCAGTCCG CGCCGCAACC 801 TGCCGCGCCC GCTGCGGAAA ATAAAGCGGT
TCCCGCGCCC GCCCCGCAAT 851 CTCCTGCCGC TTCGCCTTCC GGCACGCGTT
CGGTCGGCGG CATTGTTTGG 901 CAGCGTCCGA CGCAAGGTAA AGTGGTTGCC
GATTTCGGCG GCAACAACAA 951 GGGTGTCGAT ATTGCAGGAA ATGCGGGACA
GCCCGTTTTG GCGGCGGCTG 1001 ACGGCAAAGT GGTTTATGCA GGTTCCGGTT
TGAGGGGATA CGGCAATTTG 1051 GTCATCATCC AGCATAATTC TTCCTTCCTG
ACCGCATACG GGCACAACCA 1101 AAAATTGCTG GTCGGCGAAG GCCAGCAGGT
CAAACGCGGG CAGCAGGTCG 1151 CTTTGATGGG CAATACCGAG GCTTCTAGAA
CGCAGCTTCA TTTCGAGGTG 1201 CGGCAAAACG GCAAACCGGT TAATCCGAAC
AGCTATATCG CGTTCTGA
This corresponds to the amino acid sequence <SEQ ID 112; ORF
025.a>:
TABLE-US-00242 a025.pep 1 MLTPTTL*VA CTALAAQLGG CPTQHPSPVI
AGNSGMQTVP SAPVYNPYGA 51 TPYNAAPAAN DAPYVPPVQS APVYXPPAYV
PPSAPAVSGT YVPSYAXVDI 101 NAATHTIVRG DTVYKISKCY HISQDDFRAW
NGMTDNTLSI GQIVKVKPAG 151 YAAPKAAAVK SRPAVPAAAQ PLVQSAPVDI
NAATHTIVRG DTVYNISKRY 201 HISQDDFRAW NGMTDNTLSI GQIVKVKPAG
YAAPKAAAVK SRPAVPAAVQ 251 TPVKPAAQPP VQSAPQPAAP AAENKAVPAP
APQSPAASPS GTRSVGGIVW 301 QRPTQGKVVA DFGGNNKGVD IAGNAGQPVL
AAADGKVVYA GSGLRGYGNL 351 VIIQHNSSFL TAYGHNQKLL VGEGQQVKRG
QQVALMGNTE ASRTQLHFEV 401 RQNGKPVNPN SYIAF* m025/a025 97.4%
identity over a 351 aa overlap 10 20 30 m025.pep
VPPVQSAPVYTPPAYVPPSAPAVSGTYVPS ||||||||||:||||||||||||||||||| a025
GMQTVPSAPVYNPYGATPYNAAPAANDAPYVPPVQSAPVYXPPAYVPPSAPAVSGTYVPS 40 50
60 70 80 90 40 50 60 70 80 90 m025.pep
YAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAP ||
|||||||||||||||||:||| ||||||||||||||||||||||||||||||||||| a025
YAXVDINAATHTIVRGDTVYKISKCYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAP 100
110 120 130 140 150 100 110 120 130 140 150 m025.pep
KAAAVKSRPAVPAAAQPPVQSAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMT
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| a025
KAAAVKSRPAVPAAAQPLVQSAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMT 160
170 180 190 200 210 160 170 180 190 200 210 m025.pep
DNMLSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAEN ||
||||||||||||||||||:|||:|||||||||||||||||||||||||||||||||| a025
DNTLSIGQIVKVKPAGYAAPKAAAVKSRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAEN 220
230 240 250 260 270 220 230 240 250 260 270 m025.pep
KAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a025
KAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAAD 280
290 300 310 320 330 280 290 300 310 320 330 m025.pep
GKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDASRT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a025
GKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTEASRT 340
350 360 370 380 390 340 350 m025.pep QLHFEVRQNGKPVNPNSYIAFX
|||||||||||||||||||||| a025 QLHFEVRQNGKPVNPNSYIAFX 400 410
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 025
shows 75.6% identity over a 353 aa overlap with a predicted ORF
(ORF 025.ng) from N. gonorrhoeae:
TABLE-US-00243 m025/g025 10 20 30 m025.pep
VPPVQSAPVYTPPAYVPPSAPAVSGTYVPS |||||:||||:||||||||||||||||||| g025
GMQTVSSAPVYNPYGATPYNAAPAANDAPYVPPVQTAPVYSPPAYVPPSAPAVSGTYVPS 40 50
60 70 80 90 40 50 60 70 80 90 m025.pep
YAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g025
YAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAP 100
110 120 130 140 150 100 110 120 130 140 150 m025.pep
KAAAVKSRPAVPAAAQPPVQSAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMT | g025
K----------------------------------------------------------- 160
170 180 190 200 210 m025.pep
DNMLSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAEN
|||||||||||||:||||||||||||||||||||||||| g025
---------------------TAAVESRPAVPAAAQTPVKPAAQPPVQSAPQPAAPAAEN 160
170 180 190 220 230 240 250 260 m025.pep
KAVPAPAP--QSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAA
|||||||| ||||||||||||||||||||||||||||||||:||||||||||||||||| g025
KAVPAPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGGNKGVDIAGNAGQPVLAA 200
210 220 230 240 250 270 280 290 300 310 320 m025.pep
ADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g025
ADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDAS 260
270 280 290 300 310 330 340 350 m025.pep RTQLHFEVRQNGKPVNPNSYIAFX
|||||||||||||||||||||||| g025 RTQLHFEVRQNGKPVNPNSYIAFX 320 330
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 113>:
TABLE-US-00244 g031.seq 1 ATGGTGTCCC TCCGCTTCAG ATTCGGCAAC
CACTTTAAAC GCCGACATTC 51 TGACAATTTC CTTTTCCGCC AGCCAAATAT
CATGCGTATC TTTCGGTTCG 101 GGCTTGTTGG GCATGGCAAC CTTCAACAGC
CGCGCCATCA CAGGAATCGT 151 CGTTCCCTGA ATCAGCAGCG ACAGCACCAC
CACGGCAAAC GCCACATCAA 201 ACAGCAGGTG CGAATTGGGA ACGCCCATCA
CCAGCGGCAT CATCGCCAGC 251 GAAATCGGTA CGGCTCCTCG CAAGCCCAAC
CAACTGATAT ACGCCTTTTC 301 ACGCAGGCTG TAATTGAATT TCCACAAACC
GCCGAACACT GCCAGCGGAC 351 GCGCGACCAG CATCAGGAAC GCCGCAATCG
CCAAGGCTTC CGCCGCCCTG 401 TCCAACACGC CGGCGGGAGA AACCAGCAGA
CCGAGCATGA CGAACAAAGT 451 TGCCTGCGCC AGCCAAGCCA AACCGTCCAT
CACACGCAAA ACGTGTTCCG 501 TcgcACGGTT GCGCTGGTTA CCGACAATGA
TGCCGGCAAG GTAAACCGCC 551 AAAAAGCCGC TGCCGCCTAT GGTATTGGTA
AACGCAAACA CAAGCAGCCC 601 GCCCGACACA ATCATCAGCG CGTACAGACC
TTCCGtacac acctccaatt 651 cccaatcaac gtcatagctg tctcccgtgt
taaaatgttc ttcacttcag 701 aatccccccc ttcttcccag cccgaaacct
tcatgtgtta naccctgggg 751 tgccccaacg gatttagtaa cctcccaatg
actctgcttg tcgccccctt 801 cgcccgcttt ctccttccgg gaaaacttgt
tgtccccgtc ttacattaa
This corresponds to the amino acid sequence <SEQ ID 114; ORF
031.ng>:
TABLE-US-00245 g031.pep 1 MVSLRFRFGN HFKRRHSDNF LFRQPNIMRI
FRFGLVGHGN LQQPRHHRNR 51 RSLNQQRQHH HGKRHIKQQV RIGNAHHQRH
HRQRNRYGSS QAQPTDIRLF 101 TQAVIEFPQT AEHCQRTRDQ HQERRNRQGF
RRPVQHAGGR NQQTEHDEQS 151 CLRQPSQTVH HTQNVFRRTV ALVTDNDAGK
VNRQKAAAAY GIGKRKHKQP 201 ARHNHQRVQT FRTHLQFPIN VIAVSRVKMF
FTSESPPSSQ PETFMCXTLG 251 CPNGFSNLPM TLLVAPFARF LLPGKLVVPV LH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 115>:
TABLE-US-00246 m031.seq (partial) 1 ...CGCCTGAAGC ACGGTGTCGG
ACTGCATTTC TATTCGGCTA TACGCCTTTT 51 CACGCAGGCT GTAATTGAAT
TTCCACAAAC CGCCGAACAC TGCCGACGGA 101 CGCGCGACCA GCATCAGGAA
CGCCGCAATC GCCAAgGCTT CCGCCGCCCT 151 GTCCAACACG TTGGCAGGAG
AAACCAGCAG CAAAGGCATT CCCAAACGTG 201 CGGACAAAGT GGTCGAAACC
ACGCTCAGAA ACAACAGTGC GCCACCCGGC 251 AG....
This corresponds to the amino acid sequence <SEQ ID 116; ORF
031>:
TABLE-US-00247 m031.pep (partial) 1 ...RLKHGVGLHF YSAIRLFTQA
VIEFPQTAEH CRRTRDQHQE RRNRQGFRRP 51 VQHVGRRNQQ QRHSQTCGQS
GRNHAQKQQC ATRQ....
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 117>:
TABLE-US-00248 a031.seq 1 ATACGCCTTT TCACGCAGGC TGTAATTGAA
TTTCCACAAA CCGCCGAACA 51 CTGCCGGCGG ACGCGCGACC AGCATCAGGA
ACGCCGCAAT CGCCAAGGCT 101 TCCGCCGCCC CGTCCAACAC GTTGGCAGGA
GAAACCAGCA GCAAAGGCAT 151 TCCCAAACGT GCGGACAAAG TGGTCGAAAC
CACGCTCAGA AACAACAGTG 201 CGCCACCCGG CAG
This corresponds to the amino acid sequence <SEQ ID 118; ORF
031.a>:
TABLE-US-00249 a031.pep (partial) 1 IRLFTQAVIE FPQTAEHCRR
TRDQHQERRN RQGFRRPVQH VGRRNQQQRH 51 SQTCGQSGRN HAQKQQCATR Q
m031/a031 100.0% identity over a 71 aa overlap 10 20 30 40 50 60
m031.pep
RLKHGVGLHFYSAIRLFTQAVIEFPQTAEHCRRTRDQHQERRNRQGFRRPVQHVGRRNQQ
||||||||||||||||||||||||||||||||||||||||||||||| a03
IRLFTQAVIEFPQTAEHCRRTRDQHQERRNRQGFRRPVQHVGRRNQQ 10 20 30 40 70 80
m031.pep QRHSQTCGQSGRNHAQKQQCATRQ |||||||||||||||||||||||| a031
QRHSQTCGQSGRNHAQKQQCATRQ 50 60 70
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 031
shows 60.0% identity over a 85 aa overlap with a predicted ORF (ORF
031.ng) from N. gonorrhoeae:
TABLE-US-00250 m031/g031 10 20 30 m031.pep
RLKHGVGLHFYSAIRLFTQAVIEFPQTAEH | ::| : : ||||||||||||||||| g031
NQQRQHHHGKRHIKQQVRIGNAHHQRHHRQRNRYGSSQAQPTDIRLFTQAVIEFPQTAEH 60 70
80 90 100 110 40 50 60 70 80 m031.pep
CRRTRDQHQERRNRQGFRRPVQHVGRRNQQQRHS-QTCGQSGRNHAQKQQCATRQ
|:|||||||||||||||||||||:| |||| :|: |:| :: : ::: | : |: g031
CQRTRDQHQERRNRQGFRRPVQHAGGRNQQTEHDEQSCLRQPSQTVHHTQNVFRRTVALV 120
130 140 150 160 170 g031
TDNDAGKVNRQKAAAAYGIGKRKHKQPARHNHQRVQTFRTHLQFPINVIAVSRVKMFFTS 180
190 200 210 220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 119>:
TABLE-US-00251 g032.seq 1 ATGCGGCGAA ACGTGCCTGC CGTCGCCGTA
TTGCGCCGCC CACGATTCGA 51 GGCGTTTTTG GATTTGGCGT TGGCTCAGGC
GCGTGCCGTT CCTGCCGGTA 101 AACAGGGCTT TGCCGTCCGA TGCCGTCTGA
CGCAGCGGCA GATAGTTTTT 151 CAAGGCTTCC ACGCTTTTGC CGGTCAGCGG
AACCTGACGC TGCTTGCGCC 201 CTTTGCCGGT AACGTGTACC CACGCTTCGT
CCAAATATAC ATCATCTGCA 251 TTCAAGCCGT GTATCTCGCT CACGCGCAAA
CCGCTGCCGT ACATCAGCTC 301 GAACAGCGCG TGGTCGCGCA CCGCCAGCGG
GTCGCCGCCG TCCACGGGCA 351 AATCCAACAT CCGGTTCAGC CATTCCTGCG
GCAGGGCTTT GGGTACGCGC 401 TCGGGCTGCT TCGGCGGTTT GATGTCGGCG
GTCGGGTCGG CGCGCATCAG 451 CCCGCGTTTG ACCAGCCAGG CGCAATACTG
CCGCCACGCC GACAGCTTGC 501 GCGCCAGCGT CCGACCGTCC AAACCGCGCT
GCGACAGCCG CCGCAACGCC 551 GccgTAAAAT CGCGCCGCGA CAAGTCCTGC
GGCACGCcgc ctgcaTCTTC 601 AGACGGCATT TGTGCCAACA GTGCAAACAG
TTCTTCCAAA TCGCGCCGGT 651 ATGCCGCAAC CGTGTGCTCC GACTTGCCCT
CGCGCACGAT GTTTTCCAAA 701 TAAGCGTCAA AATacgccgC AAACccgTCC
AAAACCATAA CCGTCCCACA 751 CAAATATCAA AAAACCAGTG A
This corresponds to the amino acid sequence <SEQ ID 110; ORF
032.ng>:
TABLE-US-00252 g032.pep 1 MRRNVPAVAV LRRPRFEAFL DLALAQARAV
PAGKQGFAVR CRLTQRQIVF 51 QGFHAFAGQR NLTLLAPFAG NVYPRFVQIY
IICIQAVYLA HAQTAAVHQL 101 EQRVVAHRQR VAAVHGQIQH PVQPFLRQGF
GYALGLLRRF DVGGRVGAHQ 151 PAFDQPGAIL PPRRQLARQR PTVQTALRQP
PQRRRKIAPR QVLRHAACIF 201 RRHLCQQCKQ FFQIAPVCRN RVLRLALAHD
VFQISVKIRR KPVQNHNRPT 251 QISKNQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 111>:
TABLE-US-00253 m032.seq (partial) 1 ATGCGGCGAA ACGTGCmTGC
mGTCGCCGTT kTGCGCCGCC CATTGCGCCA 51 AACGTTTTTG GATTTGGCGT
TGGCTCAGGC GCGTGCCGTT CCTGCCGGTA 101 AACAGGGCTT TGCCGTCCGA
TGCCGTCTGA CGCAGCGGCA GATAGTTTTT 151 CAGGGCTTCC ACGCTTTTGC
CGACCAGCGG CACCTGCCGC TgTT.GCGCC 201 CTTTGCCGAT AAcGTGTACC
CACGCyTCGT CCAAATAGAC ATCATCTGCA 251 TTCAAGCCGT GTATCTCGCT
CACGCGCAAA CCGCTGCCGT ACATCAGTTC 301 GAACAGGGCG TGGTCGCGCA
CCGCCAGCGG GTCGCCGCCG TCCACGGGCA 351 AATCCAGCAT CCGGTTCAGC
CATTCCTGCG GCAGGGCTTT GGGTACGCGC 401 TCGGGCTGCT TCGGCGGTTT
GATGTCGGCG GTCGGGTCGG CGTGCATCAG 451 GCCGCGCTTT ACCAGCCAAA
CGCAATACTG CCGCCAAGAC GAAAGCTTGC 501 GAGCCAGCGT CCGTTCCCCC
AAACCGCG...
This corresponds to the amino acid sequence <SEQ ID 112; ORF
032>:
TABLE-US-00254 m032.pep (partial) 1 MRRNVXAVAV XRRPLRQTFL
DLALAQARAV PAGKQGFAVR CRLTQRQIVF 51 QGFHAFADQR HLPLXAPFAD
NVYPRXVQID IICIQAVYLA HAQTAAVHQF 101 EQGVVAHRQR VAAVHGQIQH
PVQPFLRQGF GYALGLLRRF DVGGRVGVHQ 151 AALYQPNAIL PPRRKLASQR
PFPQTA...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 113>:
TABLE-US-00255 a032.seq 1 ATGCGGCGAA ACGTGCCTGC CGTCGCCGTT
TTGCGCCGCC CATTGCGCCA 51 AACGTTTTTG GATTTGGCGT TGGCTCAGGC
GCGTGCCGTT CCTGCCGGTA 101 AACAGGGCTT TGCCGTCCGA TGCCGTCTGA
CGCAGCGGCA GATAGTTTTT 151 CAGGGCTTCC ACGCTTTTGC CGGTCAGCGG
AACCTGCCGC TGCTTGCGTC 201 CTTTGCCGGT AACGTGTACC CACGCCTCGT
CCAAATATAC ATCATCTGCA 251 TTCAAGCCGT GTATCTCGCT CACGCGCAAA
CCGCTGCCGT ACATCAGTTC 301 GAACAGCGCG TGATCGCGCA CCGCCAGCGG
GTCGCCGCCG TCCACGGGCA 351 AATCCAGCAT CCGGTTCAGC CATTCCTGCG
GCAGGGCTTT GGGTACGCGC 401 TCGGGCTGCT TCGGCGGTTT GATGTCGGCG
GTCGGGTCGG TATGCAGCAG 451 ACCGCGTTTG ACCAGCCAGG CGCAATACTG
CCGCCAAGAC GACAGCTTGC 501 GCGCCAGCGT CCGCGCATTC AAACCGCGCT
GCGACAGCCG CCGCAACGCC 551 GCCGTAAAAT CGCGCTGCGA CAAGCCCTGC
GGCACGCCGC CTGCATCTTC 601 AGACGGCATT TGTGCCAACA GCGCAAACAG
TTCTTCCAAA TCGCGCCGGT 651 ATGCCGCCAC CGTGTGCTCC GACTTGCCCT
CGCGCACGAT GTTTTCCAAA 701 TAAGCGTCAA AATGCGCCGC AAACCCGTCC
AAAACCATAA CCGCCCCACA 751 CAAATATCAA AAAAACAGTG A
This corresponds to the amino acid sequence <SEQ ID 114; ORF
032.a>:
TABLE-US-00256 a032.pep 1 MRRNVPAVAV LRRPLRQTFL DLALAQARAV
PAGKQGFAVR CRLTQRQIVF 51 QGFHAFAGQR NLPLLASFAG NVYPRLVQIY
IICIQAVYLA HAQTAAVHQF 101 EQRVIAHRQR VAAVHGQIQH PVQPFLRQGF
GYALGLLRRF DVGGRVGMQQ 151 TAFDQPGAIL PPRRQLARQR PRIQTALRQP
PQRRRKIALR QALRHAACIF 201 RRHLCQQRKQ FFQIAPVCRH RVLRLALAHD
VFQISVKMRR KPVQNHNRPT 251 QISKKQ* m032/a032 88.1% identity over a
176 aa overlap 10 20 30 40 50 60 m032.pep
MRRNVXAVAVXRRPLRQTFLDLALAQARAVPAGKQGFAVRCRLTQRQIVFQGFHAFADQR |||||
|||| |||||||||||||||||||||||||||||||||||||||||||||| || a032
MRRNVPAVAVLRRPLRQTFLDLALAQARAVPAGKQGFAVRCRLTQRQIVFQGFHAFAGQR 10 20
30 40 50 60 70 80 90 100 110 120 m032.pep
HLPLXAPFADNVYPRXVQIDIICIQAVYLAHAQTAAVHQFEQGVVAHRQRVAAVHGQIQH :||| |
|| ||||| ||| |||||||||||||||||||||| |:||||||||||||||| a032
NLPLLASFAGNVYPRLVQIYIICIQAVYLAHAQTAAVHQFEQRVIAHRQRVAAVHGQIQH 70 80
90 100 110 120 130 140 150 160 170 m032.pep
PVQPFLRQGFGYALGLLRRFDVGGRVGVHQAALYQPNAILPPRRKLASQRPFPQTA
|||||||||||||||||||||||||||::|:|: ||:|||||||:|| ||| ||| a032
PVQPFLRQGFGYALGLLRRFDVGGRVGMQQTAFDQPGAILPPRRQLARQRPRIQTALRQP 130
140 150 160 170 180 a032
PQRRRKIALRQALRHAACIFRRHLCQQRKQFFQIAPVCRHRVLRLALAHDVFQISVKMRR 190
200 210 220 230 240
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 032
shows 86.4% identity over a 176 aa overlap with a predicted ORF
(ORF 032.ng) from N. gonorrhoeae:
TABLE-US-00257 m032/g032 10 20 30 40 50 60 m032.pep
MRRNVXAVAVXRRPLRQTFLDLALAQARAVPAGKQGFAVRCRLTQRQIVFQGFHAFADQR |||||
|||| ||| ::||||||||||||||||||||||||||||||||||||||| || g032
MRRNVPAVAVLRRPRFEAFLDLALAQARAVPAGKQGFAVRCRLTQRQIVFQGFHAFAGQR 10 20
30 40 50 60 70 80 90 100 110 120 m032.pep
HLPLXAPFADNVYPRXVQIDIICIQAVYLAHAQTAAVHQFEQGVVAHRQRVAAVHGQIQH :| |
|||| ||||| ||| |||||||||||||||||||:|| ||||||||||||||||| g032
NLTLLAPFAGNVYPRFVQIYIICIQAVYLAHAQTAAVHQLEQRVVAHRQRVAAVHGQIQH 70 80
90 100 110 120 130 140 150 160 170 m032.pep
PVQPFLRQGFGYALGLLRRFDVGGRVGVHQAALYQPNAILPPRRKLASQRPFPQTA
|||||||||||||||||||||||||||:|| |: ||:|||||||:|| ||| ||| g032
PVQPFLRQGFGYALGLLRRFDVGGRVGAHQPAFDQPGAILPPRRQLARQRPTVQTALRQP 130
140 150 160 170 180 g032
PQRRRKIAPRQVLRHAACIFRRHLCQQCKQFFQIAPVCRNRVLRLALAHDVFQISVKIRR 190
200 210 220 230 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 115>:
TABLE-US-00258 g033.seq 1 ATGGCGGCGG CGGACAAACT CTTGGGCGGC
GACCGCCGCA GCGTCGCCAT 51 CATCGGAGAC GGCGCGATGA CGGCGGGGCA
GGCGTTTGAA GCCTTGAATT 101 GCGCGGGCGA TATGGATGTG GATTTGCTGG
TCGTCCTCAA CGACAACGAA 151 ATGTCGATTT CCCCCAACGT CGGCGCGTTG
CCCAAATATC TTGCCAGCAA 201 CGTCGTGCGC GATATGCACG GACTGTTGAG
TACCGTCAAA GCGCAAAcgg 251 GCAAGGTATT AGACAAAATA CCCGGCGCGA
TGGagtTTGC CCAAAAAGTC 301 GAACAcaaaA TCAAAACCCT TGCCGAAGAA
GCCGAACACG CCAAACAGTC 351 GCTGTCGCTG TTTGAAAATT TCGGCTTCCG
CTACACCGGC CCCGTGGACG 401 GACACAACGT CGAGAATCTG GTGGACGTAT
TGAAAGACTT GCGCAGCCGC 451 AAAGGCCCTC AGTTGCTGCA CGTCATCACC
AAAAAGGGCA ACGGCTACAA 501 ACTCGCCGAA AACGACCCcg tcaAATACCA
CGCCGTCGCc aACCTGCcta 551 AAGAAGGCGG GGCGCAAATg ccGTCTGAAA
AAGAACCCAA GCCCGCCgCc 601 aaaccgACCT ATACCCAAGT ATTCGGCAAA
TGGCTGTGCG ACCGGGCGGC 651 GGCAGATTCC CGACTGGTTG CGATTACCCC
CGCCATGCGC GAGGGCAGCG 701 GACTGGTGGA GTTTGAACAA CGATTCCCCG
ACCGCTATTT CGATGTCGGC 751 ATCGCCGAGC AGCACGCCGT tacCTTTGCC
GGCGGTTTGG CGTGCGAAGG 801 CATGAAGCCC GTCGTGGCGA TTTATTCCAC
CTTTTTACAA CGCGCCTACG 851 ACCAACTGGT GCACGACATC GCCCTGCAAA
ACCTGCCCGT TTTGTTTGCC 901 GTCGACCGTG CGGGCATCGT CGGCGCGGAC
GGTCCGACCC ATGCCGGCTT 951 GTACGATTTG AGCTTCTTGC GCTGTGTGCC
GAACATGATT GTTGCCGCGC 1001 CGAGCGATGA AAACGAATGC CGCCTGCTGC
TTTCGACCTG CTATCAGGCG 1051 GATGCGCCCG CCGCCGTCCG CTATCCGCGC
GGCACGGGTA CGGGCGCGCC 1101 GGTTTCAGAC GGCATGGAAA CCGTGGAAAT
CGGCAAGGGC ATTATCCGCC 1151 GCGAAGGTGA GAAAACCGCC TTcatTGCCT
TCGGCAGTAT GGTCGCCACC 1201 GCATTGGCGG TTGCCGAAAA ACTGAACGCC
ACCGTCGCCG ATATGCGCTt 1251 cgtcaaacCG ATAGACGAAG AGTTGATTGT
CCGCCTTGCC CGAAGCCAcg 1301 accGCATCGT TACCCTTGAA GAAAACGCCG
AACAGGGCGG CGCAGGCGGC 1351 GCGGTCTTGG AAGTGTTGGC GAAACACGGC
ATCTGCAAAC CCGTTTTGCT 1401 TTTGGGCGTT GCCGATACCG TAACCGAACA
CGGCGATCCG AAAAAACTTT 1451 TGGACGATTT GGGTTTGAGT GCCGAAGCGG
TGGAACGCCG GGTGCGCGAG 1501 TGGCTGCCGG ACCGTGATGC GGCAAATTAA
This corresponds to the amino acid sequence <SEQ ID 116; ORF
033.ng>:
TABLE-US-00259 g033.pep 1 MAAADKLLGG DRRSVAIIGD GAMTAGQAFE
ALNCAGDMDV DLLVVLNDNE 51 MSISPNVGAL PKYLASNVVR DMHGLLSTVK
AQTGKVLDKI PGAMEFAQKV 101 EHKIKTLAEE AEHAKQSLSL FENFGFRYTG
PVDGHNVENL VDVLKDLRSR 151 KGPQLLHVIT KKGNGYKLAE NDPVKYHAVA
NLPKEGGAQM PSEKEPKPAA 201 KPTYTQVFGK WLCDRAAADS RLVAITPAMR
EGSGLVEFEQ RFPDRYFDVG 251 IAEQHAVTFA GGLACEGMKP VVAIYSTFLQ
RAYDQLVHDI ALQNLPVLFA 301 VDRAGIVGAD GPTHAGLYDL SFLRCVPNMI
VAAPSDENEC RLLLSTCYQA 351 DAPAAVRYPR GTGTGAPVSD GMETVEIGKG
IIRREGEKTA FIAFGSMVAT 401 ALAVAEKLNA TVADMRFVKP IDEELIVRLA
RSHDRIVTLE ENAEQGGAGG 451 AVLEVLAKHG ICKPVLLLGV ADTVTEHGDP
KKLLDDLGLS AEAVERRVRE 501 WLPDRDAAN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 117>:
TABLE-US-00260 m033.seq 1 ATGGCGGCGG CAGACAAACT CTTGGGCAGC
GACCGCCGCA GCGTCGCCAT 51 CATCGGCGAC GGCGCGATGA CGGCGGGGCA
GGCGTTTGAA GCCTTGAATT 101 GCGCaG.CGA TATGGATGTr GATTTGCTrG
TCGTCCTCAA CGACAACGAA 151 ATGTCGATTT CCCCCAACGT CGGCGCGCTG
CCGAAATACC TTGCCAGCAA 201 CGTCGTGCGC GATATGCACG GCCTGTTGAG
TACCGTCAAA GCGCAAACGG 251 GCAAGGTATT AGACAAAATA CCCGGCGCGA
TGGAGTTTGC CCAAAAAGTC 301 GAACACAAAA TCAAAACCCT TGCCGAAGAA
GCCGAACACG CCAAACAGTC 351 GCTGTCTTTG TTTGAAAACT TCGGCTTCCG
CTACACCGGC CCCGTGGACG 401 GACACAACGT CGAAAATCTG GTGGACGTAT
TGAAAGACTT GCGCAGCCGC 451 AAAGGCCCTC AGTTGCTGCA CGTCATCACC
AAAAAGGGCA ACGGCTACAA 501 ACTCGCCGAA AACGACCCCG TCAAATACCA
CGCCGTCGCC AACCTGCCTA 551 AAGAAAGCGC GGCGCAAATG CCGTCTGAAA
AAGAACCCAA GCCCGCCGCC 601 AAACCGACCT ATACCCAAGT GTTCGGCAAA
TGGCTGTGCG ACCGGGCGGC 651 GGCAGATTCC CGACTGGTTG CGATTACCCC
CGCCATGCGC GAGGGCAGCG 701 GCTTGGTTGA GTTTGAACAA CGATTCCCCG
ACCGCTATTT CGATGTCGGC 751 ATCGCCGAGC AGCACGCCGT TACCTTTGCC
GGCGGTTTGG CTTGCGAAGG 801 GATGAAGCCC GTCGTGGCGA TTTATTCCAC
CTTTTTACAA CGCGCCTACG 851 ACCAACTGGT GCACGACATC GCCCTGCAAA
ACCTACCCGT TTTGTTTGCC 901 GTCGACCGCG CGGGCATCGT CGGCGCGGAC
GGCCCGACCC ATGCCGGTCT 951 GTACGATTTG AGCTTTTTGC GCTGCGTGCC
GAACATGATT GTCGCCGCGC 1001 CGAGCGATGA AAACGAATGC CGCCTGTTGC
TTTCGACCTG CTATCAGGCA 1051 GACGCGCCCG CCGCCGTCCG CTATCCGCGC
GGCACGGGTA CGGGCGCGCC 1101 GGTTTCAGAC GGCATGGAAA CCGTGGAAAT
CGGCAAGGGC ATTATCCGCC 1151 GCGAAGGTGA GAAAACCGCA TTCATTGCCT
TCGGCAGTAT GGTCGCCCCC 1201 GCATTGGCGG TTGCCGAAAA ACTGAACGCC
ACCGTCGCCG ATATGCGCTT 1251 CGTCAAACCG ATAGACGAAG AGTTGATTGT
CCGCCTTGCC CGAAGCCACG 1301 ACCGCATCGT TACCCTTGAA GAAAACGCCG
AACAGGGCGG CGCAGGCGGC 1351 GCGGTGCTGG AAGTATTGGC GAAACACGGC
ATCTGCAAAC CCGTTTTGCT 1401 TTTGGGCGTT GCCGATACCG TAACCGGACA
CGGCGATCCG AAAAAACTTT 1451 TAGACGATTT GGGCTTGAGT GCCGAAGCGG
TGGAACGGCG TGTGCGCGCG 1501 TGGCTGTCGG ATCGGGATGC GGCAAATTAA
This corresponds to the amino acid sequence <SEQ ID 118; ORF
033>:
TABLE-US-00261 m033.pep 1 MAAADKLLGS DRRSVAIIGD GAMTAGQAFE
ALNCAXDMDV DLLVVLNDNE 51 MSISPNVGAL PKYLASNVVR DMHGLLSTVK
AQTGKVLDKI PGAMEFAQKV 101 EHKIKTLAEE AEHAKQSLSL FENFGFRYTG
PVDGHNVENL VDVLKDLRSR 151 KGPQLLHVIT KKGNGYKLAE NDPVKYHAVA
NLPKESAAQM PSEKEPKPAA 201 KPTYTQVFGK WLCDRAAADS RLVAITPAMR
EGSGLVEFEQ RFPDRYFDVG 251 IAEQHAVTFA GGLACEGMKP VVAIYSTFLQ
RAYDQLVHDI ALQNLPVLFA 301 VDRAGIVGAD GPTHAGLYDL SFLRCVPNMI
VAAPSDENEC RLLLSTCYQA 351 DAPAAVRYPR GTGTGAPVSD GMETVEIGKG
IIRREGEKTA FIAFGSMVAP 401 ALAVAEKLNA TVADMRFVKP IDEELIVRLA
RSHDRIVTLE ENAEQGGAGG 451 AVLEVLAKHG ICKPVLLLGV ADTVTGHGDP
KKLLDDLGLS AEAVERRVRA 501 WLSDRDAAN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 119>:
TABLE-US-00262 a033.seq 1 ATGGCGGCGG CGGACAAACA GTTGGGCAGC
GACCGCCGCA GCGTCGCCAT 51 CATCGGCGAC GGCGCGATGA CGGCGGGTCA
GGCGTTTGAA GCCTTGAACT 101 GCGCGGGCGA TATGGATGTG GATTTGCTGG
TCGTCCTCAA CGACAACGAA 151 ATGTCGATTT CCCCCAACGT CGGTGCGTTG
CCCAAATACC TTGCCAGCAA 201 CGTCGTGCGC GATATGCACG GACTGTTGAG
TACCGTCAAA GCGCAAACGG 251 GCAAGGTATT AGACAAAATA CCCGGCGCGA
TGGAGTTTGC CCAAAAAGTC 301 GAACATAAAA TCAAAACCCT TGCCGAAGAA
GCCGAACACG CCAAACAGTC 351 ACTGTCTTTG TTTGAAAACT TCGGCTTCCG
CTATACCGGC CCCGTGGACG 401 GACACAACGT CGAAAATCTG GTCGATGTAT
TGGAAGACCT GCGCGGACGC 451 AAAGGCCCGC AGCTTCTGCA CGTCATCACC
AAAAAGGGCA ACGGCTACAA 501 ACTCGCCGAA AACGATCCCG TCAAATACCA
CGCCGTCGCC AACCTGCCTA 551 AAGAAAGCGC GGCGCAAATG CCGTCTGAAA
AAGAACCCAA GCCCGCCGCC 601 AAACCGACCT ATACCCAAGT GTTCGGCAAA
TGGCTGTGCG ACCGGGCGGC 651 GGCAGATTCC CGACTGGTTG CGATTACCCC
CGCCATGCGC GAGGGCAGCG 701 GCTTGGTTGA GTTTGAACAA CGATTCCCCG
ACCGCTATTT CGATGTCGGC 751 ATCGCCGAGC AGCACGCCGT TACCTTTGCC
GGCGGTTTGG CTTGCGAAGG 801 GATGAAGCCC GTCGTGGCGA TTTATTCCAC
CTTTTTACAA CGCGCCTACG 851 ACCAACTGGT GCACGACATC GCCCTGCAAA
ACCTGCCCGT TTTGTTTGCC 901 GTCGACCGCG CGGGCATCGT CGGCGCGGAC
GGCCCGACCC ATGCCGGTTT 951 GTACGATTTA AGCTTTTTGC GCTGCATTCC
GAATATGATT GTCGCCGCGC 1001 CGAGCGATGA AAATGAATGC CGCCTGCTGC
TTTCGACCTG CTATCAGGCA 1051 GACGCGCCCG CCGCCGTCCG CTATCCGCGC
GGCACGGGTA CGGGCGTGCC 1101 GGTTTCAGAC GGCATGGAAA CCGTGGAAAT
CGGCAAGGGC ATTATCCGCC 1151 GCGAAGGTGA GAAAACCGCA TTCATTGCCT
TCGGCAGTAT GGTCGCCCCT 1201 GCATTGGCGG TCGCCGGAAA ACTGAACGCC
ACCGTCGCCG ATATGCGCTT 1251 CGTCAAACCG ATAGACGAAG AGTTGATTGT
CCGCCTTGCC CGAAGCCACG 1301 ACCGCATCGT TACCCTTGAA GAAAACGCCG
AACAGGGCGG CGCAGGCAGC 1351 GCGGTGCTGG AAGTGTTGGC GAAACACGGC
ATCTGCAAAC CCGTCTTGCT 1401 TTTGGGCGTT GCCGATACCG TAACCGGACA
CGGCGATCCG AAAAAACTTT 1451 TAGACGATTT GGGCTTGAGT GCCGAAGCGG
TGGAACGGCG TGTGCGCGCG 1501 TGGCTGTCGG ATCGGGATGC GGCAAATTAA
This corresponds to the amino acid sequence <SEQ ID 120; ORF
033.a>:
TABLE-US-00263 a033.pep 1 MAAADKQLGS DRRSVAIIGD GAMTAGQAFE
ALNCAGDMDV DLLVVLNDNE 51 MSISPNVGAL PKYLASNVVR DMHGLLSTVK
AQTGKVLDKI PGAMEFAQKV 101 EHKIKTLAEE AEHAKQSLSL FENFGFRYTG
PVDGHNVENL VDVLEDLRGR 151 KGPQLLHVIT KKGNGYKLAE NDPVKYHAVA
NLPKESAAQM PSEKEPKPAA 201 KPTYTQVFGK WLCDRAAADS RLVAITPAMR
EGSGLVEFEQ RFPDRYFDVG 251 IAEQHAVTFA GGLACEGMKP VVAIYSTFLQ
RAYDQLVHDI ALQNLPVLFA 301 VDRAGIVGAD GPTHAGLYDL SFLRCIPNMI
VAAPSDENEC RLLLSTCYQA 351 DAPAAVRYPR GTGTGVPVSD GMETVEIGKG
IIRREGEKTA FIAFGSMVAP 401 ALAVAGKLNA TVADMRFVKP IDEELIVRLA
RSHDRIVTLE ENAEQGGAGS 451 AVLEVLAKHG ICKPVLLLGV ADTVTGHGDP
KKLLDDLGLS AEAVERRVRA 501 WLSDRDAAN* m033/a033 98.4% identity over
a 509 aa overlap 10 20 30 40 50 60 m033.pep
MAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAXDMDVDLLVVLNDNEMSISPNVGAL ||||||
|||||||||||||||||||||||||||| |||||||||||||||||||||||| a033
MAAADKQLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGAL 10 20
30 40 50 60 70 80 90 100 110 120 m033.pep
PKYLASNVVRDMHGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a033
PKYLASNVVRDMHGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSL 70 80
90 100 110 120 130 140 150 160 170 180 m033.pep
FENFGFRYTGPVDGHNVENLVDVLKDLRSRKGPQLLHVITKKGNGYKLAENDPVKYHAVA
||||||||||||||||||||||||:|||:||||||||||||||||||||||||||||||| a033
FENFGFRYTGPVDGHNVENLVDVLEDLRGRKGPQLLHVITKKGNGYKLAENDPVKYHAVA 130
140 150 160 170 180 190 200 210 220 230 240 m033.pep
NLPKESAAQMPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a033
NLPKESAAQMPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQ 190
200 210 220 230 240 250 260 270 280 290 300 m033.pep
RFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a033
RFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFA 250
260 270 280 290 300 310 320 330 340 350 360 m033.pep
VDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPR
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a033
VDRAGIVGADGPTHAGLYDLSFLRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPR 310
320 330 340 350 360 370 380 390 400 410 420 m033.pep
GTGTGAPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAPALAVAEKLNATVADMRFVKP
|||||:||||||||||||||||||||||||||||||||||||||| |||||||||||||| a033
GTGTGVPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAPALAVAGKLNATVADMRFVKP 370
380 390 400 410 420 430 440 450 460 470 480 m033.pep
IDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDP
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| a033
IDEELIVRLARSHDRIVTLEENAEQGGAGSAVLEVLAKHGICKPVLLLGVADTVTGHGDP 430
440 450 460 470 480 490 500 510 m033.pep
KKLLDDLGLSAEAVERRVRAWLSDRDAANX |||||||||||||||||||||||||||||| a033
KKLLDDLGLSAEAVERRVRAWLSDRDAANX 490 500 510
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 033
shows 98.4% identity over a 509 aa overlap with a predicted ORF
(ORF 033.ng) from N. gonorrhoeae:
TABLE-US-00264 m033/g033 m033.pep
MAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAXDMDVDLLVVLNDNEMSISPNVGAL 60
|||||||||:||||||||||||||||||||||||| |||||||||||||||||||||||| g033
MAAADKLLGGDRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGAL 60
m033.pep
PKYLASNVVRDMHGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSL 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g033
PKYLASNVVRDMHGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSL 120
m033.pep
FENFGFRYTGPVDGHNVENLVDVLKDLRSRKGPQLLHVITKKGNGYKLAENDPVKYHAVA 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g033
FENFGFRYTGPVDGHNVENLVDVLKDLRSRKGPQLLHVITKKGNGYKLAENDPVKYHAVA 180
m033.pep
NLPKESAAQMPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQ 240
|||||::||||||||||||||||||||||||||||||||||||||||||||||||||||| g033
NLPKEGGAQMPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQ 240
m033.pep
RFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFA 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g033
RFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFA 300
m033.pep
VDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPR 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g033
VDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPR 360
m033.pep
GTGTGAPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAPALAVAEKLNATVADMRFVKP 420
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| g033
GTGTGAPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVATALAVAEKLNATVADMRFVKP 420
m033.pep
IDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDP 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| g033
IDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTEHGDP 480
m033.pep KKLLDDLGLSAEAVERRVRAWLSDRDAANX 510 ||||||||||||||||||| ||
||||||| g033 KKLLDDLGLSAEAVERRVREWLPDRDAANX 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 121>:
TABLE-US-00265 g034.seq 1 ATGAGCCGTT TATGGTTTTT TGCCGTAAAA
AACATTATAA TCCGCCTTAT 51 TTACCTATTG CCCAAGGAGA CACAAATGGC
ACTCGTATCC ATGCGCCAAC 101 TGCTTGACCA CGCCGCCGAA AACAGCTACG
GCCTGCCCGC GTTCAACGTC 151 AACAACCTCG AACAAATGCG CGCCATTATG
GAAGCCGCCG ACCAAGTCAA 201 CGCGCCCGTC ATCGTACAGG CGAGCGCAGG
TGCGCGCAAA TACGcggGCG 251 CGCCGTTTTT GCGCCACCTG ATTCTGGCGG
CAGTCGAAGA ATTTCCGCAC 301 ATCCCCGTCG TGATGCACCA AGACCACGGC
GCATCGCCCG ACGTgtgCCA 351 ACGCTCCATC CAACTGGGCT TCTCCTCCGT
GATGATGGAC GGCTCTTTGC 401 TCGAAGACGG CAAAACCCCT TCTTCTTACG
AATACAACGT CAACGCCACC 451 CGTACCGTCG TCAACTTCTC CCACGCCTGC
GGCGTGTCCG TCGAAGGCGA 501 AATCGGCGTA TTGGGCAACC TCGAAACCGG
CGAAGCAGGC GAAGAAGACG 551 GAGTGGGCGC GGCAGGCAAA CTCTCACACG
ACCAAATGCT CACCAGCGTT 601 GAAGATGCCG TGCGTTTCGT TAAAGATACC
GGCGTTGACG CATTGGCGAT 651 TGCCGTCGGC ACCAGCCACG GCGCATACAA
ATTCACCCGT CCGCCCACAG 701 GCGACGTATT GCGTATCGAC CGCATCAAGG
AAATCCACCA AGCCCTGCCC 751 AATACACACA TCGTGATGCA CGgctCCAGC
TCCGTTCCGC AAGAatgGCT 801 GAAAGTCATC AACGAATACG GCGGCAATAT
CGGCGAAACC TACGGCGTGC 851 CGGTTGAAGA AATCGTCGAA GGCATCAAAC
ACGGCGTGCG CAAAGTCAAC 901 ATCGATACCG ACCTGCGCCT CGCTTCCACC
GGCGCGGTAC GCCGCTACCT 951 TGCCGAAAAC CCGTCCGACT TTGATCCGCG
CAAATACTTG GGCAAAACCA 1001 TTGAAGCGAT GAAGCAAATC TGCCTCGACC
GTTATCTTGC GTTCGGTTGC 1051 GAAGGTCAGG CAGGCAAAAT CAAACCTGTT
TCGTTGGAAA AAATGGCAAG 1101 CCGTTATGCC AAGGGCGAAT TGAACCAAAT
CGTCAAATAA
This corresponds to the amino acid sequence <SEQ ID 122; ORF
034.ng>:
TABLE-US-00266 g034.pep 1 MSRLWFFAVK NIIIRLIYLL PKETQMALVS
MRQLLDHAAE NSYGLPAFNV 51 NNLEQMRAIM EAADQVNAPV IVQASAGARK
YAGAPFLRHL ILAAVEEFPH 101 IPVVMHQDHG ASPDVCQRSI QLGFSSVMMD
GSLLEDGKTP SSYEYNVNAT 151 RTVVNFSHAC GVSVEGEIGV LGNLETGEAG
EEDGVGAAGK LSHDQMLTSV 201 EDAVRFVKDT GVDALAIAVG TSHGAYKFTR
PPTGDVLRID RIKEIHQALP 251 NTHIVMHGSS SVPQEWLKVI NEYGGNIGET
YGVPVEEIVE GIKHGVRKVN 301 IDTDLRLAST GAVRRYLAEN PSDFDPRKYL
GKTIEAMKQI CLDRYLAFGC 351 EGQAGKIKPV SLEKMASRYA KGELNQIVK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 123>:
TABLE-US-00267 m034.seq (partial) 1 ATGAGCTGTT TATGGTTTTT
TGCTGTAAAA AACATTATAA TCCGCCTTAT 51 TTACCTATTG CCCAAGGAGA
CACAAATGGC ACTCGTATCC ATGCGCCAAC 101 TGCTTGATCA TGCTGCCGAA
wACAGCTACG GCyTGCCGGC GTTCAACGTC 151 AACAACCTCG wACAGATGCG
CGCCATCATG GAGGCTGCAG ACCAAGTCGA 201 CGCCCCCGTC ATCGTACAGG
CGAGTGCCGG TGCGCGCAAA TATGCGGGTG 251 CGCCGTTTTT ACGCCACCTG
ATTTTGGCGG CTGTCGAAGT ATTTCCACAC 301 ATCCCCGTCG TCATGCACCA
AGACCACGGC GCATCACCCG ACGTGTGCCA 351 ACGCTCCATC CAACTGGGCT
TCTCCTCTGT AATGATGGAC GGCTCGCTGA 401 TGGAAGACGG CAAAACCCCT
TCTTCTTACG AATACAACGT CAACGCCACA 451 CGTACCGTGG TTAACTTCTC
CCACGCTTGC GGCGTATCCG TTGAAGGCGA 501 AATCGGCGTA TTGGGCAACC
TCGAAACCGG CGATGCAGGC GAAGAAGACG 551 GTGTAGGCGC AGTGGGCAAA
CTTTCCCACG ACCAAATGCT GACCAGCGTC 601 GAAGATGCCG TATGTTTCGT
TAAAGATACC GGCGTTGACG CATTGGCTAT 651 TGCCGTCGGC ACCAGCCACG
GCGCATACAA ATTCACCCGT CCGCCCACAG 701 GCGATGTATT ACGTATCGAC
CGCATCAAAG AAATCCACCA AGCCCTGCCC 751 AATACACACA TCGTGATGCA C...
This corresponds to the amino acid sequence <SEQ ID 124; ORF
034>:
TABLE-US-00268 m034.pep (partial) 1 MSCLWFFAVK NIIIRLIYLL
PKETQMALVS MRQLLDHAAE XSYGLPAFNV 51 NNLXQMRAIM EAADQVDAPV
IVQASAGARK YAGAPFLRHL ILAAVEVFPH 101 IPVVMHQDHG ASPDVCQRSI
QLGFSSVMMD GSLMEDGKTP SSYEYNVNAT 151 RTVVNFSHAC GVSVEGEIGV
LGNLETGDAG EEDGVGAVGK LSHDQMLTSV 201 EDAVCFVKDT GVDALAIAVG
TSHGAYKFTR PPTGDVLRID RIKEIHQALP 251 NTHIVMH...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 125>:
TABLE-US-00269 a034.seq 1 ATGAGCCGTT TATGGTTTTT TGCCGCAAAA
AACATTATAA TCCGCCTTAT 51 TTACCTATTG CCCAAGGAGA CACAAATGGC
ACTCGTATCC ATGCGCCAAC 101 TGCTTGATCA TGCTGCCGAA AACAGCTACG
GCCTGCCCGC GTTCAACGTC 151 AACAACCTCG AACAAATGCG CGCCATTATG
GAAGCCGCCG ACCAAGTCAA 201 CGCGCCCGTC ATCGTACAGG CGAGCGCAGG
TGCGCGCAAA TACGCGGGCG 251 CGCCGTTTTT GCGCCACCTG ATTTTGGCGG
CTGTCGAAGA ATTTCCGCAC 301 ATCCCCGTCG TGATGCACCA AGACCACGGC
GCATCGCCCG ACGTGTGCCA 351 ACGCTCCATC CAACTGGGCT TTTCCTCCGT
GATGATGGAC GGCTCGCTGA 401 TGGAAGACGG CAAAACCCCT TCTTCTTATG
AATACAACGT CAACGCCACC 451 CGTACCGTGG TTAATTTCTC CCACGCCTGC
GGCGTATCCG TTGAAGGCGA 501 AATCGGCGTA TTGGGCAACC TCGAAACTGG
CGAAGCCGGC GAAGAAGACG 551 GTGTAGGCGC AGTGGGCAAA CTTTCCCACG
ACCAAATGCT CACCAGCGTC 601 GAAGATGCCG TGCGTTTCGT TAAAGATACC
GGCGTTGACG CATTGGCGAT 651 TGCCGTCGGC ACCAGCCACG GCGCGTACAA
ATTCACCCGT CCGCCCACAG 701 GCGACGTGTT GCGTATCGAC CGCATCAAAG
AAATCCACCA AGCCCTGCCC 751 AATACACACA TCGTGATGCA CGGCTCCAGC
TCCGTTCCGC AAGAATGGCT 801 GAAAGTCATC AACGAATACG GCGGCAATAT
CGGCGAAACC TACGGCGTGC 851 CGGTTGAAGA AATCGTCGAA GGCATCAAAC
ACGGCGTGCG TAAAGTCAAC 901 ATCGATACCG ACTTGCGCCT TGCTTCCACC
GGCGCGGTAC GCCGCTACCT 951 TGCCGAAAAC CCGTCCGACT TCGATCCGCG
CAAATATTTG AGCAAAACCA 1001 TTGAAGCGAT GAAGCAAATC TGCCTCGACC
GCTACCTCGC GTTCGGTTGC 1051 GAAGGTCAGG CAGGCAAAAT CAAACCGGTT
TCCTTGGAAA AAATGGCAAA 1101 CCGTTATGCC AAGGGCGAAT TGAACCAAAT
CGTCAAATAA
This corresponds to the amino acid sequence <SEQ ID 126; ORF
034.a>:
TABLE-US-00270 a034.pep 1 MSRLWFFAAK NIIIRLIYLL PKETQMALVS
MRQLLDHAAE NSYGLPAFNV 51 NNLEQMRAIM EAADQVNAPV IVQASAGARK
YAGAPFLRHL ILAAVEEFPH 101 IPVVMHQDHG ASPDVCQRSI QLGFSSVMMD
GSLMEDGKTP SSYEYNVNAT 151 RTVVNFSHAC GVSVEGEIGV LGNLETGEAG
EEDGVGAVGK LSHDQMLTSV 201 EDAVRFVKDT GVDALAIAVG TSHGAYKFTR
PPTGDVLRID RIKEIHQALP 251 NTHIVMHGSS SVPQEWLKVI NEYGGNIGET
YGVPVEEIVE GIKHGVRKVN 301 IDTDLRLAST GAVRRYLAEN PSDFDPRKYL
SKTIEAMKQI CLDRYLAFGC 351 EGQAGKIKPV SLEKMANRYA KGELNQIVK*
m034/a034 96.9% identity over a 257 aa overlap 10 20 30 40 50 60
m034.pep
MSCLWFFAVKNIIIRLIYLLPKETQMALVSMRQLLDHAAEXSYGLPAFNVNNLXQMRAIM ||
|||||:||||||||||||||||||||||||||||||| |||||||||||| |||||| a034
MSRLWFFAAKNIIIRLIYLLPKETQMALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIM 10 20
30 40 50 60 70 80 90 100 110 120 m034.pep
EAADQVDAPVIVQASAGARKYAGAPFLRHLILAAVEVFPHIPVVMHQDHGASPDVCQRSI
||||||:||||||||||||||||||||||||||||| ||||||||||||||||||||||| a034
EAADQVNAPVIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSI 70 80
90 100 110 120 130 140 150 160 170 180 m034.pep
QLGFSSVMMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGDAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a034
QLGFSSVMMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAG 130
140 150 160 170 180 190 200 210 220 230 240 m034.pep
EEDGVGAVGKLSHDQMLTSVEDAVCFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRID
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| a034
EEDGVGAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRID 190
200 210 220 230 240 250 m034.pep RIKEIHQALPNTHIVMH
||||||||||||||||| a034
RIKEIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVN 250
260 270 280 290 300
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 034
shows 96.5% identity over a 257 aa overlap with a predicted ORF
(ORF 034.ng) from N. gonorrhoeae:
TABLE-US-00271 m034/g034 m034.pep
MSCLWFFAVKNIIIRLIYLLPKETQMALVSMRQLLDHAAEXSYGLPAFNVNNLXQMRAIM 60 ||
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| g034
MSRLWFFAVKNIIIRLIYLLPKETQMALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIM 60
m034.pep
EAADQVDAPVIVQASAGARKYAGAPFLRHLILAAVEVFPHIPVVMHQDHGASPDVCQRSI 120
||||||:||||||||||||||||||||||||||||| ||||||||||||||||||||||| g034
EAADQVNAPVIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSI 120
m034.pep
QLGFSSVMMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGDAG 180
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||:|| g034
QLGFSSVMMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAG 180
m034.pep
EEDGVGAVGKLSHDQMLTSVEDAVCFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRID 240
|||||||:|||||||||||||||| ||||||||||||||||||||||||||||||||||| g034
EEDGVGAAGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRID 240
m034.pep RIKEIHQALPNTHIVMH 257 ||||||||||||||||| g034
RIKEIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVN
300
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 127>:
TABLE-US-00272 g036.seq 1 ATGCTGAAGC CGTGTTTGGT ATACAGTGCC
TGTGCGGCGG cgttgcCTGC 51 GCGGACTTCG AGCAGCAGGC GTTGCGTGCC
TTCGGGCAGA TGTGCGTACC 101 AATATTCGAG CAGGGCGGAC GCAACGCCCC
GTCGGCGGCA TTCGGGCGCG 151 GTGGCAATCA GGTGCAGTTC GGATTCGTCG
GGCAGGTTCT GCCAAACGAT 201 AAAGGCGGCA ATCCTGCCGT CTTTTTCCGC
AAGGAAAACC TGTTCGGACG 251 GCGAAACAAG CGCGGACTCA AATTGGCGTT
GCGTCCACGC GGACGGGTTG 301 CAGACGGTAT CGAGCGCGGC CAGTGCGGCG
CAGTCGGACG GTGAGGCTGG 351 GCGGATGTTC ATGTTCGTGC CTTCCGTTCC
GCCTGTTCTT TGGCAGTCAG 401 GGCGATTTTG TTGCGGACGT AGAGCAGTTC
GGCGTGTGCC GCGCCAGTTG 451 CGGGATAGCC GCCGCCGAGG GCGAGCGCGA
GAAAATCGGC GGCGGTCGGC 501 ATATCGGGTT TGCCTGAGAA GGGCGGACGG
TTTTCCAGTG CGAACGCACT 551 GCCGATGCCG TCTGAAAAGA CGTACCCCTC
GGGGAGGGCA ATGTCTGCCG 601 CCCTACCGAC TTGATAATCG CTCAAACGGC
GGCGGTTCAG CGTGTCGAAC 651 CACGCATAAA ACACTTCGCC CATACGCGCG
TCCGCAGCGG CGAGTATGCA 701 GCTTTGCGGC GGCGGCAGCG AGGCGGCGGC
ATCGAGCGTG GGGATGCCGA 751 TTAAAGGCGT GTCGAACGGC GTTGCCAAAC
CTTGCGCCAC GCCGATGCCG 801 ATACGCAGTC CGGTAA
This corresponds to the amino acid sequence <SEQ ID 128; ORF
036.ng>:
TABLE-US-00273 g036.pep 1 MLKPCLVYSA CAAALPARTS SSRRCVPSGR
CAYQYSSRAD ATPRRRHSGA 51 VAIRCSSDSS GRFCQTIKAA ILPSFSARKT
CSDGETSADS NWRCVHADGL 101 QTVSSAASAA QSDGEAGRMF MFVPSVPPVL
WQSGRFCCGR RAVRRVPRQL 151 RDSRRRGRAR ENRRRSAYRV CLRRADGFPV
RTHCRCRLKR RTPRGGQCLP 201 PYRLDNRSNG GGSACRTTHK TLRPYARPQR
RVCSFAAAAA RRRHRAWGCR 251 LKACRTALPN LAPRRCRYAV R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 129>:
TABLE-US-00274 m036.seq 1 ATGCTGAAGC CGTGCGCCGT GTACAGTGCC
TGTGCGGCGG TGTTGCCTGC 51 ACGGACTTCG AGCAGCAGGC GTTGCGTGTC
TTCGGGCAGA TGTGTGAACC 101 AATATTCGAG CAGGGCGGAC GCAATTCCTT
GGCGGCGGCA TTCGGGCGCG 151 GTGGCAATCA GGTGCAGTTC GGATTCGTCG
GGCAGGTTCT GCCAAACGAT 201 AAAGGCGGCA ATCCCg.CGT CTTTTTCCGC
AAGGAAAACC TGTTCGGACG 251 GCGAAACCAG TGCGGACTCA AATTGGCGTT
GCGTCCATGC GGACGGGTTG 301 CAGACGGCAT CGAGTGCGGC CAGCTCCTCA
CAATCGGCAC AAACGGCACG 351 GCGGATGTTC ACGGGCGCGC TCTCCGTTCG
GCCTGTTCTT TGGCAGTCAG 401 GGCGATTTTG TTGCGGACGT AGAGCAAACC
GGCGTGTGCG GCATGGACGG 451 CAGGATAACC GCCCTTGGCT GCCAATGCGA
GAAAGTCGGC GGCAGTCGGC 501 ATATCCGGTC TGCCTGAGAA CGGCGGAGCT
TCTTCCAGCG CGAACGCGCT 551 GCCTATGCCG TCTGAAAAGG CGCATCCCTC
CGGCAGCCGG ATGTCTGCCG 601 CCCGCCCGAC CTGATAATCG CTCAAACGGT
GGCAGTTCAG CGTATCGAAC 651 CATGCATAAA ACACTTCGCC CATACGAGCG
TCCGTAGCGG CAAGGATGCA 701 GCTTTGCGGC GGCGGCAGCG AGGCGGCGGC
ATCGAGCGAG GGTACGCCGA 751 TTAAGGGGGT ATCAAACGGC GTTGCCAAAC
CCTGAGCTAC ACCGATGCCG 801 ATACGCAGTC CGGTAA
This corresponds to the amino acid sequence <SEQ ID 130; ORF
036>:
TABLE-US-00275 m036.pep 1 MLKPCAVYSA CAAVLPARTS SSRRCVSSGR
CVNQYSSRAD AIPWRRHSGA 51 VAIRCSSDSS GRFCQTIKAA IPXSFSARKT
CSDGETSADS NWRCVHADGL 101 QTASSAASSS QSAQTARRMF TGALSVRPVL
WQSGRFCCGR RANRRVRHGR 151 QDNRPWLPMR ESRRQSAYPV CLRTAELLPA
RTRCLCRLKR RIPPAAGCLP 201 PARPDNRSNG GSSAYRTMHK TLRPYERP*R
QGCSFAAAAA RRRHRARVRR 251 LRGYQTALPN PELHRCRYAV R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 131>:
TABLE-US-00276 a036.seq 1 ATGCTGAAGC CGTGCGCCGT GTACAGTGCC
TGTGCGGCGG TGTTGCCTGC 51 ACGGACTTCG AGCAGCAGGC GTTGCGTGTC
TTCGGGCAGA TGTGTGAACC 101 AATATTCGAG CAGGGCGGAC GCAATTCCTT
GGCGGCGGCA TTCGGGCGCG 151 GTGGCAATCA GGTGCAGTTC GGATTCGTCG
GGCAGGTTCT GCCAAACGAT 201 AAAGGCGGCA ATCCCGCCGT CTTTTTCCGC
AAGGAAAACC TGTTCGGACG 251 GCGAAACCAG TGCGGACTCA AATTGGCGTT
GCGTCCACGC GGACGGGTTG 301 CAGACGGCAT CGAGCGCGGC GAGTGCGGCG
CAATCGGCAT AAACGGCGCG 351 GCGGATGTTC ACAGGCGCGC CCTCCGTTCC
GCCTGTTCTT TGGCAGTCAA 401 GGCGATTTTG TTGCGGACGT AGAGCAGCTC
GGCGTGTGCC GCAGCGACGG 451 CGGGAAAACC GCCTTCAGCC GCCAGATTGA
GGAAGTCGGC GGCGGTCGGC 501 ATATCGGGTT TGCCTGAGAA GGGCGGACGG
TTTTCCAGCG CGAACGCATT 551 GCCGATGCCG TCTGAAAAGG CGCATCCTTC
CGGCAGCCGG ATGTCTGCCG 601 CCCGACCGAC CTGATAATCG CTCAAACGGC
GGCGGTTCAG CGTGTCGAAC 651 CATGCATAAA ACACTTCGCC CATACGTGCG
TCCGCAGCGG CAAGGATGCA 701 GCTTTGCGGC GGCGGCAGCG AGGCGGCGGC
ATCGAGCGAG GGTACGCCGA 751 TTAAAGGAGT ATCAAACGGC GTTGCCAAAC
CTTGCGCCAC GCCGATGCCG 801 ATACGCAGTC CCGTAA
This corresponds to the amino acid sequence <SEQ ID 132; ORF
036.a>:
TABLE-US-00277 a036.pep 1 MLKPCAVYSA CAAVLPARTS SSRRCVSSGR
CVNQYSSRAD AIPWRRHSGA 51 VAIRCSSDSS GRFCQTIKAA IPPSFSARKT
CSDGETSADS NWRCVHADGL 101 QTASSAASAA QSA*TARRMF TGAPSVPPVL
WQSRRFCCGR RAARRVPQRR 151 RENRLQPPD* GSRRRSAYRV CLRRADGFPA
RTHCRCRLKR RILPAAGCLP 201 PDRPDNRSNG GGSACRTMHK TLRPYVRPQR
QGCSFAAAAA RRRHRARVRR 251 LKEYQTALPN LAPRRCRYAV P* m036/a036 85.6%
identity over a 270 aa overlap 10 20 30 40 50 60 m036.pep
MLKPCAVYSACAAVLPARTSSSRRCVSSGRCVNQYSSRADAIPWRRHSGAVAIRCSSDSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a036
MLKPCAVYSACAAVLPARTSSSRRCVSSGRCVNQYSSRADAIPWRRHSGAVAIRCSSDSS 10 20
30 40 50 60 70 80 90 100 110 120 m036.pep
GRFCQTIKAAIPXSFSARKTCSDGETSADSNWRCVHADGLQTASSAASSSQSAQTARRMF
|||||||||||| |||||||||||||||||||||||||||||||||||::||| |||||| a036
GRFCQTIKAAIPPSFSARKTCSDGETSADSNWRCVHADGLQTASSAASAAQSAXTARRMF 70 80
90 100 110 120 130 140 150 160 170 180 m036.pep
TGALSVRPVLWQSGRFCCGRRANRRVRHGRQDNRPWLPMRESRRQSAYPVCLRTAELLPA ||| ||
|||||| |||||||| ||| : |::|| | |||:||| |||| |: :|| a036
TGAPSVPPVLWQSRRFCCGRRAARRVPQRRRENRLQPPDXGSRRRSAYRVCLRRADGFPA 130
140 150 160 170 180 190 200 210 220 230 240 m036.pep
RTRCLCRLKRRIPPAAGCLPPARPDNRSNGGSSAYRTMHKTLRPYERPXRQGCSFAAAAA ||:|
||||||| |||||||| |||||||||:|| |||||||||| || ||||||||||| a036
RTHCRCRLKRRILPAAGCLPPDRPDNRSNGGGSACRTMHKTLRPYVRPQRQGCSFAAAAA 190
200 210 220 230 240 250 260 270 m036.pep
RRRHRARVRRLRGYQTALPNPELHRCRYAVRX |||||||||||: ||||||| :|||||| a036
RRRHRARVRRLKEYQTALPNLAPRRCRYAVPX 250 260 270
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 036
shows 74.9% identity over a 271 aa overlap with a predicted ORF
(ORF 036.ng) from N. gonorrhoeae:
TABLE-US-00278 m036/g036 10 20 30 40 50 60 m036.pep
MLKPCAVYSACAAVLPARTSSSRRCVSSGRCVNQYSSRADAIPWRRHSGAVAIRCSSDSS |||||
|||||||:|||||||||||| ||||: |||||||| | |||||||||||||||| g036
MLKPCLVYSACAAALPARTSSSRRCVPSGRCAYQYSSRADATPRRRHSGAVAIRCSSDSS 10 20
30 40 50 60 70 80 90 100 110 120 m036.pep
GRFCQTIKAAIPXSFSARKTCSDGETSADSNWRCVHADGLQTASSAASSSQSAQTARRMF
||||||||||| |||||||||||||||||||||||||||||:|||||::|| | ||| g036
GRFCQTIKAAILPSFSARKTCSDGETSADSNWRCVHADGLQTVSSAASAAQSDGEAGRMF 70 80
90 100 110 120 130 140 150 160 170 180 m036.pep
TGALSVRPVLWQSGRFCCGRRANRRVRHGRQDNRPWLPMRESRRQSAYPVCLRTAELLPA : ||
||||||||||||||| ||| : :|:| ||:||:||| |||| |: :|: g036
MFVPSVPPVLWQSGRFCCGRRAVRRVPRQLRDSRRRGRARENRRRSAYRVCLRRADGFPV 130
140 150 160 170 180 190 200 210 220 230 240 m036.pep
RTRCLCRLKRRIPPAAGCLPPARPDNRSNGGSSAYRTMHKTLRPYERPXRQGCSFAAAAA ||:|
|||||| | :: |||| | |||||||:|| || ||||||| || |: |||||||| g036
RTHCRCRLKRRTPRGGQCLPPYRLDNRSNGGGSACRTTHKTLRPYARPQRRVCSFAAAAA 190
200 210 220 230 240 250 260 270 m036.pep
RRRHRARVRRLRGYQTALPNPELHRCRYAVRX |||||| ||:: :||||| :|||||||| g036
RRRHRAWGCRLKACRTALPNLAPRRCRYAVRX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 133>:
TABLE-US-00279 m036-1.seq 1 ATGCTGAAGC CGTGCGCCGT GTACAGTGCC
TGTGCGGCGG TGTTGCCTGC 51 ACGGACTTCG AGCAGCAGGC GTTGCGTGTC
TTCGGGCAGA TGTGTGAACC 101 AATATTCGAG CAGGGCGGAC GCAATTCCTT
GGCGGCGGCA TTCGGGCGCG 151 GTGGCAATCA GGTGCAGTTC GGATTCGTCG
GGCAGGTTCT GCCAAACGAT 201 AAAGGCGGCA ATCCCGCCGT CTTTTTCCGC
AAGGAAAACC TGTTCGGACG 251 GCGAAACCAG TGCGGACTCA AATTGGCGTT
GCGTCCATGC GGACGGGTTG 301 CAGACGGCAT CGAGTGCGGC CAGCTCCTCA
CAATCGGCAC AAACGGCACG 351 GCGGATGTTC ACGGGCGCGC TCTCCGTTCG
GCCTGTTCTT TGGCAGTCAG 401 GGCGATTTTG TTGCGGACGT AGAGCAAACC
GGCGTGTGCG GCATGGACGG 451 CAGGATAACC GCCCTTGGCT GCCAATGCGA
GAAAGTCGGC GGCAGTCGGC 501 ATATCCGGTC TGCCTGAGAA CGGCGGAGCT
TCTTCCAGCG CGAACGCGCT 551 GCCTATGCCG TCTGAAAAGG CGCATCCCTC
CGGCAGCCGG ATGTCTGCCG 601 CCCGCCCGAC CTGATAATCG CTCAAACGGT
GGCAGTTCAG CGTATCGAAC 651 CATGCATAAA ACACTTCGCC CATACGAGCG
TCCGTAG
This corresponds to the amino acid sequence <SEQ ID 134; ORF
0036-1>:
TABLE-US-00280 m036-1.pep 1 MLKPCAVYSA CAAVLPARTS SSRRCVSSGR
CVNQYSSRAD AIPWRRHSGA 51 VAIRCSSDSS GRFCQTIKAA IPPSFSARKT
CSDGETSADS NWRCVHADGL 101 QTASSAASSS QSAQTARRMF TGALSVRPVL
WQSGRFCCGR RANRRVRHGR 151 QDNRPWLPMR ESRRQSAYPV CLRTAELLPA
RTRCLCRLKR RIPPAAGCLP 201 PARPDNRSNG GSSAYRTMHK TLRPYERP*
m036-1/g036 76.8% identity in 228 aa overlap 10 20 30 40 50 60
m036-1.pep
MLKPCAVYSACAAVLPARTSSSRRCVSSGRCVNQYSSRADAIPWRRHSGAVAIRCSSDSS |||||
|||||||:|||||||||||| ||||: |||||||| | |||||||||||||||| g036
MLKPCLVYSACAAALPARTSSSRRCVPSGRCAYQYSSRADATPRRRHSGAVAIRCSSDSS 10 20
30 40 50 60 70 80 90 100 110 120 m036-1.pep
GRFCQTIKAAIPPSFSARKTCSDGETSADSNWRCVHADGLQTASSAASSSQSAQTARRMF
||||||||||| ||||||||||||||||||||||||||||||:|||||::|| | ||| g036
GRFCQTIKAAILPSFSARKTCSDGETSADSNWRCVHADGLQTVSSAASAAQSDGEAGRMF 70 80
90 100 110 120 130 140 150 160 170 180 m036-1.pep
TGALSVRPVLWQSGRFCCGRRANRRVRHGRQDNRPWLPMRESRRQSAYPVCLRTAELLPA : ||
||||||||||||||| ||| : :|:| ||:||:||| |||| |: :|: g036
MFVPSVPPVLWQSGRFCCGRRAVRRVPRQLRDSRRRGRARENRRRSAYRVCLRRADGFPV 130
140 150 160 170 180 190 200 210 220 229 m036-1.pep
RTRCLCRLKRRIPPAAGCLPPARPDNRSNGGSSAYRTMHKTLRPYERPX ||:| |||||| | ::
|||| | |||||||:|| || ||||||| || g036
RTHCRCRLKRRTPRGGQCLPPYRLDNRSNGGGSACRTTHKTLRPYARPQRRVCSFAAAAA 190
200 210 220 230 240 g036 RRRHRAWGCRLKACRTALPNLAPRRCRYAVRX 250 260
270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 135>:
TABLE-US-00281 g038.seq 1 ATGACTGATT TCCGCCAAGA TTTCCTCAAA
TTCTCCCTCG CCCAAAATGT 51 TTTGAAATTC GGCGAATTTA CCACCAAAGC
CGGACGGCGG TCGCCCTATT 101 TCTTCAATGC CGGCCTCTTC AACGACGGCG
CGTCCACGCT GCAACTGGCA 151 AAATTCTATG CACAATCCAT CATTGAAAGC
GGCATCCGAT TCGATATGCT 201 GTTCGGCCCC GCCTACAAAG GCATTATTTT
GGCGGCGGCA ACCGCGATGA 251 TGCTGGCGGA AAAAGGCGTG AACGTCCCGT
TTGCCTACAA CCGCAAAGAA 301 GCCAAAGACC GCGGCGAAGG CGGCGTGTTG
GTCGGCGCGC CGCTTAAAGG 351 GCGCGTGCTG ATTATCGACG ACGTGATTTC
CGCCGGCACA TCCGTACGCG 401 AATCAATCAA ACTGATTGAA GCGGAGGGTG
CAACCCCCGC CGGTGTCGCC 451 ATCGCGCTCG ACCGCATGGA AAAAGGCACG
GGTAAATTGT CCGCCGTTCA 501 GGAAGTGGAA AAACAATACG GCCTGCCCGT
CGCCCCCATC GCCAGCCTGA 551 ACGATTTGTT TATCCTGTTG CAAAACAACC
CCGAATTCGG ACAGTTCCTC 601 GAACCCGTCC GCACCTACCG CCGGCAGTAC
GGCGTAGAAT AA
This corresponds to the amino acid sequence <SEQ ID 136; ORF
038.ng>:
TABLE-US-00282 g038.pep 1 MTDFRQDFLK FSLAQNVLKF GEFTTKAGRR
SPYFFNAGLF NDGASTLQLA 51 KFYAQSIIES GIRFDMLFGP AYKGIILAAA
TAMMLAEKGV NVPFAYNRKE 101 AKDRGEGGVL VGAPLKGRVL IIDDVISAGT
SVRESIKLIE AEGATPAGVA 151 IALDRMEKGT GKLSAVQEVE KQYGLPVAPI
ASLNDLFILL QNNPEFGQFL 201 EPVRTYRRQY GVE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 137>:
TABLE-US-00283 m038.seq 1 ATGACCGATT TCCGCCAAGA TTTCCTCAAA
TTCTCCCTCG CCCAAAATGT 51 TTTGAAATTC GGCGAATTTA CCACCAAGGC
AGGACGGCGG TCGCCCTATT 101 TCTTCAATGC CGGCCTCTTT AACGACGGCT
TGTCCACGCT GCAACTGGCA 151 AAATTTTACG CACAATCCAT CATTGAAAGC
GGCATCCGAT TCGATATGCT 201 GTTCGGTCCC GCCTACAAAG GCATTATTTT
GGCGGCGGCA ACCGCGATGA 251 TGCTGGCGGA AAAAGGCGTG AACGTCCCGT
TTGCCTACAA CCGCAAAGAA 301 GCCAAAGACC ACGGCGAAGG CGGCGTGTTG
GTCGGCGCGC CGCTTAAAGG 351 GCGCGTGCTG ATTATCGACG ACGTGATTTC
CGCCGGCACA TCCGTACGCG 401 AATCGATCAA ACTGATTGAA GCGGAGGGTG
CAACCCCcGC CGGTGTCGCC 451 ATCGCGCTCG ATCGCATGGA AAAAGGCACG
GGTGAATTGA GCGCGGTTCA 501 GGAAGTGGAr AAACAATACG GkCTGCCCGT
CGCCCCCATC GCCAGCCTGA 551 ACGATTTGTT TATTCTGTTG CAAAACAACC
CCGAATTCGG ACAGTTCCTC 601 GAACCCGTCC GAGCCTACCG TCGGCAGTAC
GGCGTAGAAT AA
This corresponds to the amino acid sequence <SEQ ID 138; ORF
038>:
TABLE-US-00284 m038.pep 1 MTDFRQDFLK FSLAQNVLKF GEFTTKAGRR
SPYFFNAGLF NDGLSTLQLA 51 KFYAQSIIES GIRFDMLFGP AYKGIILAAA
TAMMLAEKGV NVPFAYNRKE 101 AKDHGEGGVL VGAPLKGRVL IIDDVISAGT
SVRESIKLIE AEGATPAGVA 151 IALDRMEKGT GELSAVQEVE KQYGLPVAPI
ASLNDLFILL QNNPEFGQFL 201 EPVRAYRRQY GVE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 139>:
TABLE-US-00285 a038.seq 1 ATGACCGATT TCCGCCAAGA TTTCCTCAAA
TTCTCCCTCG CCCAAAATGT 51 TTTGAAATTC GGCGAATTCA CCACCAAAGC
CGGACGGCGG TCGCCCTATT 101 TCTTCAATGC CGGCCTCTTT AACGACGGCT
TGTCCACGCT GCAACTGGCA 151 AAATTTTACG CACAATCCAT CATTGAAAGC
GGCATCCGAT TCGATATGCT 201 GTTCGGCCCC GCCTACAAAG GCATTATTTT
GGCGGCGGCA ACCGCGATGA 251 TGCTGGCGGA AAAAGGCGTG AACGTCCCGT
TTGCCTACAA CCGCAAAGAA 301 GCCAAAGACC ACGGCGAAGG CGGCGTGTTG
GTCGGCGCGC CGCTTAAAGG 351 GCGCGTGCTG ATTATCGACG ACGTGATTTC
CGCCGGCACA TCCGTACGCG 401 AATCGATCAA ACTGATTGAA GCGGAGGGTG
CAACCCCCGC CGGTGTCGCC 451 ATCGCGCTCG ACCGCATGGA AAAAGGCACG
GGTGAATTGA GCGCGGTTCA 501 GGAAGTGGAA AAACAATACG GCCTGCCCGT
CGCCCCCATC GCCAGCCTGA 551 ACGATTTGTT TATTCTGTTG CAAAACAACC
CCGAATTCGG ACAGTTCCTC 601 GAACCCGTCC GAGCCTACCG TCGGCAGTAC
GGCGTAGAAT AA
This corresponds to the amino acid sequence <SEQ ID 140; ORF
038.a>:
TABLE-US-00286 a038.pep 1 MTDFRQDFLK FSLAQNVLKF GEFTTKAGRR
SPYFFNAGLF NDGLSTLQLA 51 KFYAQSIIES GIRFDMLFGP AYKGIILAAA
TAMMLAEKGV NVPFAYNRKE 101 AKDHGEGGVL VGAPLKGRVL IIDDVISAGT
SVRESIKLIE AEGATPAGVA 151 IALDRMEKGT GELSAVQEVE KQYGLPVAPI
ASLNDLFILL QNNPEFGQFL 201 EPVRAYRRQY GVE* m038/a038 100.0% identity
over a 213 aa overlap 10 20 30 40 50 60 m038.pep
MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGLSTLQLAKFYAQSIIES
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a038
MIDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGLSTLQLAKFYAQSIIES 10 20
30 40 50 60 70 80 90 100 110 120 m038.pep
GIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a038
GIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL 70 80
90 100 110 120 130 140 150 160 170 180 m038.pep
IIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGTGELSAVQEVEKQYGLPVAPI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a038
IIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGTGELSAVQEVEKQYGLPVAPI 130
140 150 160 170 180 190 200 210 m038.pep
ASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVEX
|||||||||||||||||||||||||||||||||| a038
ASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVEX 190 200 210
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 038
shows 98.1% identity over a 213 aa overlap with a predicted ORF
(ORF 038.ng) from N. gonorrhoeae:
TABLE-US-00287 m038/g038 10 20 30 40 50 60 m038.pep
MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGLSTLQLAKFYAQSIIES
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| g038
MIDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGASTLQLAKFYAQSIIES 10 20
30 40 50 60 70 80 90 100 110 120 m038.pep
GIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| g038
GIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDRGEGGVLVGAPLKGRVL 70 80
90 100 110 120 130 140 150 160 170 180 m038.pep
IIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGTGELSAVQEVEKQYGLPVAPI
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| g038
IIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGIGKLSAVQEVEKQYGLPVAPI 130
140 150 160 170 180 190 200 210 m038.pep
ASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVEX
||||||||||||||||||||||||:||||||||| g038
ASLNDLFILLQNNPEFGQFLEPVRTYRRQYGVEX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 141>:
TABLE-US-00288 g039.seq 1 ATGCCGTCCG AACCACCTGC CGCTTCAGAC
GGCATCAAAC CGACACACAC 51 CGAGAAAACA TCATGCCCGC CTGTTTCTGT
CCGCACTGCA AAACCCGCCT 101 CTGGGTCAAA GAAAcccagC TCAAcgtCgC
ccaagGCTTC GTCGTCTgcc 151 aaAAAtgcga agGGCTgttt aaAgccaaaG
accAtctggc aaGcacGAAA 201 gaacctatat tcaacgattg gcccgaagct
gtttcgggat gTcaaaCTCG 251 TCcaccgcaT cggcacgcac gccattagca
aGAaacagat gtcccgcgac 301 gaaatCgccg atatcctcaa cggcggtaca
acCCTGCACG ATACGCCGCC 351 CGCAACCGCC GCTGCCGCac ctGCCGCCGC
ACCGCaggTT TCCGTACCGC 401 CCGCCCGTCA GGAAGGGCTC AACTGGACTA
TTGCAACCCT GTTCGCACTT 451 ATCGTCCTCA TTATGCAGCT TTCCTACCTC
TTCATCCTAT GA
This corresponds to the amino acid sequence <SEQ ID 142; ORF
039.ng>:
TABLE-US-00289 g039.pep 1 MPSEPPAASD GIKPTHTEKT SCPPVSVRTA
KPASGSKKPS STSPKASSSA 51 KNAKGCLKPK TIWQARKNLY STIGPKLFRD
VKLVHRIGTH AISKKQMSRD 101 EIADILNGGT TLHDTPPATA AAAPAAAPQV
SVPPARQEGL NWTIATLFAL 151 IVLIMQLSYL FIL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 143>:
TABLE-US-00290 m039.seq 1 ATGCCGTCCG AACCGCCTTA CGCCTCAGAC
GGCATCAAAC CTGACACACA 51 CGAGGAAATA CCATGCCCGC CTGTTTCTGC
CCCCACTGCA AAACCCGTCT 101 CTGGGTCAAA GAAACCCAAC TCAATGTCGC
CGnnnnnnnn nnnnnnnnnn 151 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnCCC GAGGCTGTTT 251 CGGATGTCAA ACTCGTTCAC CGTATCGGCA
CGCGCGCCAT CGGCAAGAAA 301 CAGATTTCCC GTGACGAAAT CGCCGGCATC
CTCAACGGCG GTACAACCCA 351 GCCCGATATT CCGCCCGCAA CCGCCGCCAC
CCCTGCTGCC GCACCGCAGG 401 TTACCGTACC GCCCGCCGCG CCCGCCCGTC
AGGATGGGTT CAACTGGACG 451 ATTGCAACCC TGTTTGCCCT TATCGTCCTC
ATTATGCAGC TTTCCTACCT 501 CGTCATCCTA TGA
This corresponds to the amino acid sequence <SEQ ID 144; ORF
039>:
TABLE-US-00291 m039.pep 1 MPSEPPYASD GIKPDTHEEI PCPPVSAPTA
KPVSGSKKPN SMSPXXXXXX 51 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXP
EAVSDVKLVH RIGTRAIGKK 101 QISRDEIAGI LNGGTTQPDI PPATAATPAA
APQVTVPPAA PARQDGFNWT 151 IATLFALIVL IMQLSYLVIL *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 145>:
TABLE-US-00292 a039.seq 1 ATGCCGTCTG AACCGCCTTA CGCCTCAGAC
GGCATCAAAC CTGACACACA 51 CGAGGAAATA CCATGCCCGC CTGTTTCTGC
CCCCACTGCA AAACCCGTCT 101 CTGGGTCAAA GAAACCCAAC TCAATGTCGC
CCAAGGCTTC GTCGTCTGCC 151 AAAAATGCGA AGGAATGTTT AAAGCCAAAG
ACCATCTGGC AAGCACGAAA 201 GAACCCATAT TCAACGATT. TGCCCGAAGC
TGTTTCGGAT GTCAAACTCG 251 TTCACCGCAT CGGCACGAGC GCCATCGGCA
AGAAACAGAT TTCCCGTGAC 301 GAAATCGCCG GCATCCTCAA CGGCGGCACA
ACCCAGCCCG ATATTCCGCC 351 CGCAACCGCC GCCACCCCTG CTGCCGCACC
GCAGGTTACC GTACCGCCCG 401 CCGCGCCCGC CCGTCAGGAT GGGTTCAACT
GGACGATTGC AACCCTGTTT 451 GCCCTTATCG TCCTCATTAT GCAGCTTTCC
TACCTCGTCA TCCTATGA
This corresponds to the amino acid sequence <SEQ ID 146; ORF
039.a>:
TABLE-US-00293 a039.pep 1 MPSEPPYASD GIKPDTHEEI PCPPVSAPTA
KPVSGSKKPN SMSPKASSSA 51 KNAKECLKPK TIWQARKNPY STIXPEAVSD
VKLVHRIGTS AIGKKQISRD 101 EIAGILNGGT TQPDIPPATA ATPAAAPQVT
VPPAAPARQD GFNWTIATLF 151 ALIVLIMQLS YLVIL* m039/a039 79.4%
identity over a 170 aa overlap 10 20 30 40 50 60 m039.pep
MPSEPPYASDGIKPDTHEEIPCPPVSAPTAKPVSGSKKPNSMSPXXXXXXXXXXXXXXXX
|||||||||||||||||||||||||||||||||||||||||||| a039
MPSEPPYASDGIKPDTHEEIPCPPVSAPTAKPVSGSKKPNSMSPKASSSAKNAKECLKPK 10 20
30 40 50 60 70 80 90 100 110 120 m039.pep
XXXXXXXXXXXXXXXXXXXPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDI : : |
||||||||||||||| ||||||||||||||||||||||||| a039
TIWQARKNPYSTIX-----PEAVSDVKLVHRIGTSAIGKKQISRDEIAGILNGGTTQPDI 70 80
90 100 110 130 140 150 160 170 m039.pep
PPATAATPAAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVILX
||||||||||||||||||||||||||||||||||||||||||||||||||| a039
PPATAATPAAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVILX 120 130 140 150
160
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 039
shows 60.8% identity over a 171 aa overlap with a predicted ORF
(ORF 039.ng) from N. gonorrhoeae:
TABLE-US-00294 m039/g039 10 20 30 40 50 60 m039.pep
MPSEPPYASDGIKPDTHEEIPCPPVSAPTAKPVSGSKKPNSMSPXXXXXXXXXXXXXXXX ||||||
||||||| |: |||||: ||||:||||||:| || g039
MPSEPPAASDGIKPTHTEKTSCPPVSVRTAKPASGSKKPSSTSPKASSSAKNAKGCLKPK 10 20
30 40 50 60 70 80 90 100 110 120 m039.pep
XXXXXXXXXXXXXXXXXXXPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDI : : |:
||||||||||:||:|||:|||||| ||||||| | g039
TIWQARKNLYSTIG-----PKLFRDVKLVHRIGTHAISKKQMSRDEIADILNGGTTLHDT 70 80
90 100 110 130 140 150 160 170 m039.pep
PPATAAT-PAAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVILX ||||||:
|||||||:|||| ||:|:|||||||||||||||||||| ||| g039
PPATAAAAPAAAPQVSVPPA---RQEGLNWTIATLFALIVLIMQLSYLFILX 120 130 140
150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 147>:
TABLE-US-00295 g040.seq 1 ATGAACGCGC CCGACAGCTT TGTCGCCCAC
TTCCGCGAAG CCGCCCCCTA 51 CATCCGCCAA ATGCGCGGCA CGACACTGGT
CGCCGGCATA GAcggCCGCC 101 TGCTCGAAGG CGGCACCTTA AATAAGCTCG
CCGCCGACAT CGGGCTGTTG 151 TCGCAACTGG GCATCCGACT CGTCCTCATC
CACGGCGCGT ACCACTTCCT 201 CGAccgCCTC GCCGCCGCGC AAGgccGCAC
GCCGCATTAT TGCCGgggtt 251 tGCGCGTTAC CGACGaAACc tcGctcgGAC
AGGCGCAGCA GtttGCCGGC 301 AccgTCCGCA GCCGTTTTGA agcCGCATTG
tgcggcagCG tttcaggatt 351 cgcgCGCGCG CCTTCCGTCC CGCTCGTAtc
gggcaacttc ctgacCGCCC 401 GTCcgatggg cgtgattgac ggaACCGata
tggaatacgc gggggttatc 451 cgcaaaaccg ACACCGCCGC CCTCCGTTTC
CAACTCGACG CGGGCAATAT 501 CGTCTGGATG CCGCCGCTCG GGCATTCCTA
CGGCGGCAAA ACCTTCAATC 551 TCGATATGGT GCAGGCCGCC GCTTCCGTCG
CCGTCTCGCT TCAGGCCGAA 601 AAACTCGTTT ACCTGACCCT TTCAGACGGC
ATTTCCCGCC CCGACGGCAC 651 GCTCGCCGAA ACCCTCTCGG CACAGGAAGC
GCAATCGCTG GCGGAACACG 701 CCGCCAGCGA AACCCGACGA CTGATTTCGT
CCGCCGTTGC CGCGCTCGAA 751 GGCGGCGTGC ATCGCGTCCA AATCCTCAAC
GGGGCCGCCG ACGGCAGCCT 801 GCTGCAAGAA CTCTTCACCC GCAACGGCAT
CGGCACGTCC ATTGCCAAAG 851 AAGCCTTCGT CTCCATCCGG CAGGCGCACA
GCGGCGACAT CCCGCACATC 901 GCCGCCCTCA TCCGCCCGCT GGAAGAACAG
GGCGTCCTAT TGCACCGCAG 951 CCGCGAATAC CTCGAAAACC ACATTTCCGA
ATTTTCCATC CTCGAACACG 1001 ACGGCGACCT GTACGGCTGT GCCGCACTCA
AAACCTTTGC CGAAGCCGAT 1051 TGCGGCGAAA TCGCCTGCCT TGCCGTCTCG
CCGCAGGCAC AGGACGGCGg 1101 ctACGGCGAA CGCCTGCTTG CCCACATTAT
CGATAAGGCG CGCGGCATAG 1151 GCATAAGCAG GCTGTTCGCA CTGTCCACAA
ATACCGGCGA ATGGTTTGCC 1201 GAACGCGGCT TTCAGACGGC ATCGGAAGAC
GAGCTGCCCG AAACGCGGCG 1251 CAAAGACTAC CGCAGCAACG GACGAAACCC
GCATATTCTG GTGCGTCGCC 1301 TGCACCGCTG A
This corresponds to the amino acid sequence <SEQ ID 148; ORF
040.ng>:
TABLE-US-00296 g040.pep 1 MNAPDSFVAH FREAAPYIRQ MRGTTLVAGI
DGRLLEGGTL NKLAADIGLL 51 SQLGIRLVLI HGAYHFLDRL AAAQGRTPHY
CRGLRVTDET SLGQAQQFAG 101 TVRSRFEAAL CGSVSGFARA PSVPLVSGNF
LTARPMGVID GTDMEYAGVI 151 RKTDTAALRF QLDAGNIVWM PPLGHSYGGK
TFNLDMVQAA ASVAVSLQAE 201 KLVYLTLSDG ISRPDGTLAE TLSAQEAQSL
AEHAASETRR LISSAVAALE 251 GGVHRVQILN GAADGSLLQE LFTRNGIGTS
IAKEAFVSIR QAHSGDIPHI 301 AALIRPLEEQ GVLLHRSREY LENHISEFSI
LEHDGDLYGC AALKTFAEAD 351 CGEIACLAVS PQAQDGGYGE RLLAHIIDKA
RGIGISRLFA LSTNTGEWFA 401 ERGFQTASED ELPETRRKDY RSNGRNPHIL
VRRLHR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 149>:
TABLE-US-00297 m040.seq 1 ATGAGCGCGC CCGACCTCTT TGTCGCCCAC
TTCCGCGAAG CCGTCCCCTA 51 CATCCGCCAA ATGCGCGGCA AAACGCTGGT
CGCCGGCATA GACGACCGCC 101 TGCTCGAAGG TGATACCTTA AACAAGCTCG
CCGCCGACAT CGGGCTGTTG 151 TCGCAACTGG GCATCAGGCT CGTCCTCATC
CACGGCGCGC GCCACTTCCT 201 CGACCGCCAC GCCGCCGCTC AAGGCCGCAC
GCCGCATTAT TGCCGGGGCT 251 TGCGCGTTAC CGACGAAACC TCGCTCGAAC
AGGCGCAgCA GTTTGCCGGC 301 ACCGTCCGCA GCCGTTTTGA AGCCGCATTG
TGCGGCAGCG TTTCCGGGTT 351 CGCGCGCGCG CCTTCCGTCC CGCTCGTATC
GGGCAACTTC CTGACCGCCC 401 GTCCGATAGG TGTGATTGAC GGAACCGATA
TGGAATACGC GGGCGTTATC 451 CGCAAAACCG ACACCGCCGC CCTCCGTTTC
CAACTCGACG CGGGCAATAT 501 CGTCTGGCTG CCGCCGCTCG GACATTCCTA
CAGCGGCAAG ACCTTCTATC 551 TCGATATGCT TCAAACCGCC GCCTCCGCCG
CCGTCTCGCT TCAGGCCGAA 601 AAACTCGTTT ACCTGACCCT TTCAGACGGC
ATTTCCCGCC CCGACGGCAC 651 GCTCGCCGAA ACCCTCTCGG CACAGGAAGC
GCAATCGCTG GCGGAACACG 701 CCGGCGGGCA AACGCGACGG CTGATTTCGT
CCGCCGAACT CTTCACCCGC 751 AACGGCATCG GCACGTCCAT TGCCAAAGAA
GCCTTCGTCT CCATCCGGCA 801 rGCGCAywgG G.CGACATCC CGCACATCGC
CGCCCTCATC CGCCCGCTGG 851 AAGAACAGGG CATCCTGCTG CACCGCAs.c
GCGAATACCT CGAAAACCAC 901 ATTTCCGAAT TTTCCATCCT CGAACACGAC
GGCAACCTGT ACGGTTGCGC 951 CGCCCTGAAA ACCTTTGCCG AAGCCGATTG
CGGCGAAATC GCCTGCCTTG 1001 CCGTCTCGCC GCag.cACAG GACGGCGGCT
ACGGCGAACG CnTGCTTGCC 1051 CACATTATCG ATAAGGCGCG CGGCATAGGC
ATAAGCAGGC TGTTCGCACT 1101 GTCCACAAAT ACCGGCGAAT GGTTTGCCGA
ACGCGGCTTT CAGACGGCAT 1151 CGGAAGACGA GTTGCCCGAA ACGCGGCGCA
AAGACTACCG CAGCAACGGA 1201 CGGAACTCGC ATATTCTGGT ACGTCGCCTG
CACCGCTGA
This corresponds to the amino acid sequence <SEQ ID 150; ORF
040>:
TABLE-US-00298 m040.pep 1 MSAPDLFVAH FREAVPYIRQ MRGKTLVAGI
DDRLLEGDTL NKLAADIGLL 51 SQLGIRLVLI HGARHFLDRH AAAQGRTPHY
CRGLRVTDET SLEQAQQFAG 101 TVRSRFEAAL CGSVSGFARA PSVPLVSGNF
LTARPIGVID GTDMEYAGVI 151 RKTDTAALRF QLDAGNIVWL PPLGHSYSGK
TFYLDMLQTA ASAAVSLQAE 201 KLVYLTLSDG ISRPDGTLAE TLSAQEAQSL
AEHAGGQTRR LISSAELFTR 251 NGIGTSIAKE AFVSIRQAHX XDIPHIAALI
RPLEEQGILL HRXREYLENH 301 ISEFSILEHD GNLYGCAALK TFAEADCGEI
ACLAVSPQXQ DGGYGERXLA 351 HIIDKARGIG ISRLFALSTN TGEWFAERGF
QTASEDELPE TRRKDYRSNG 401 RNSHILVRRL HR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 151>:
TABLE-US-00299 a040.seq 1 ATGATCGTGC CCGACCTCTT TGTCGCCCAC
TTCCGCGAAG CCGCCCCCTA 51 CATCCGCCAA ATGCGCGGCA AAACGCTGGT
CGCCGGCATA GACGACCGCC 101 TGCTCGAAGG TGATACCTTA AACAAGTTCG
CCGCCGACAT CGGGCTTTTG 151 TCGCAACTGG GCATCAGGCT CGTCCTCATC
CACGGCGCGC GCCACTTCCT 201 CGACCGCCAC GCCGCCGCGC AAGGCCGCAC
GCCGCATTAT TGCCGGGGCT 251 TGCGCGTTAC CGACGAAACC TCGCTCGAAC
AGGCGCAGCA GTTTGCCGGC 301 ACCGTCCGCA GCCGTTTTGA AGCCGCATTG
TGCGGCAGCG TTTCCGGGTT 351 CGCGCGCGCG CCTTCCGTCC CGCTCGTATC
GGGCAACTTC CTGACCGCCC 401 GTCCGATAGG TGTGATTGAC GGAACCGATA
TGGAATACGC GGGCGTTATC 451 CGCAAAACCG ACACCGCCGC CCTCCGTTTC
CAACTCGACG CGGGCAATAT 501 CGTCTGGCTG CCGCCGCTCG GACATTCCTA
CAGCGGCAAG ACCTTCCATC 551 TCGATATGCT TCAAACCGCC GCCTCCGTCG
CCGTCTCGCT TCAGGCCGAA 601 AAACTCGTTT ACCTGACCCT TTCAGACGGC
ATTTCCCGCC CCGACGGCAC 651 GCTCGCCGTA ACCCTCTCGG CACAGGAAGC
GCAATCGCTG GCGGAACACG 701 CCGGCGGCGA AACGCGACGG CTGATTTCGT
CCGCCGTTGC CGCGCTCGAA 751 GGCGGCGTGC ATCGCGTCCA AATCCTCAAC
GGAGCCGCCG ACGGCAGCCT 801 GCTGCAAGAA CTCTTCACCC GCAACGGCAT
CGGCACGTCC ATTGCCAAAG 851 AAGCCTTCGT CTCCATCCGG CAGGCGCACA
GCGGCGACAT CCCGCACATT 901 GCCGCCCTCA TCCGCCCGCT GGAAGAACAG
GGCATCCTGC TGCACCGCAG 951 CCGCGAATAC CTCGAAAACC ACATTTCCGA
ATTTTCCATC CTCGAACACG 1001 ACGGCAACCT GTACGGTTGC GCCGCCCTGA
AAACCTTTGC CGAAGCCGAT 1051 TGCGGCGAAA TCGCCTGCCT TGCCGTCTCG
CCGCAGGCAC AGGACGGCGG 1101 CTACGGCGAA CGCCTGCTTG CCCACATTAT
CGATAAGGCG CGCGGCATAG 1151 GCATAAGCAG GCTGTTCGCA CTGTCCACAA
ATACCGGCGA ATGGTTTGCC 1201 GAACGCGGCT TTCAGACGGC ATCGGAAGAC
GAGTTGCCCG AAACGCGGCG 1251 CAAAGACTAC CGCAGCAACG GACGGAACTC
GCATATTCTG GTGCGTCGCC 1301 TGCACCGCTG A
This corresponds to the amino acid sequence <SEQ ID 152; ORF
040.a>:
TABLE-US-00300 a040.pep 1 MIVPDLFVAH FREAAPYIRQ MRGKTLVAGI
DDRLLEGDTL NKFAADIGLL 51 SQLGIRLVLI HGARHFLDRH AAAQGRTPHY
CRGLRVTDET SLEQAQQFAG 101 TVRSRFEAAL CGSVSGFARA PSVPLVSGNF
LTARPIGVID GTDMEYAGVI 151 RKTDTAALRF QLDAGNIVWL PPLGHSYSGK
TFHLDMLQTA ASVAVSLQAE 201 KLVYLTLSDG ISRPDGTLAV TLSAQEAQSL
AEHAGGETRR LISSAVAALE 251 GGVHRVQILN GAADGSLLQE LFTRNGIGTS
IAKEAFVSIR QAHSGDIPHI 301 AALIRPLEEQ GILLHRSREY LENHISEFSI
LEHDGNLYGC AALKTFAEAD 351 CGEIACLAVS PQAQDGGYGE RLLAHIIDKA
RGIGISRLFA LSTNTGEWFA 401 ERGFQTASED ELPETRRKDY RSNGRNSHIL VRRLHR*
m040/a040 91.5% identity in 436 aa overlap 10 20 30 40 50 60
m040.pep
MSAPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLAADIGLLSQLGIRLVLI |
:|||||||||||:|||||||||||||||||||||||||||:||||||||||||||||| a040
MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKFAADIGLLSQLGIRLVLI 10 20
30 40 50 60 70 80 90 100 110 120 m040.pep
HGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTVRSRFEAALCGSVSGFARA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a040
HGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTVRSRFEAALCGSVSGFARA 70 80
90 100 110 120 130 140 150 160 170 180 m040.pep
PSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWLPPLGHSYSGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a040
PSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWLPPLGHSYSGK 130
140 150 160 170 180 190 200 210 220 230 240 m040.pep
TFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAGGQTRR
||:|||||||||:|||||||||||||||||||||||||| ||||||||||||||||:||| a040
TFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTLAVTLSAQEAQSLAEHAGGETRR 190
200 210 220 230 240 250 260 270 m040.pep
LISSA------------------------ELFTRNGIGTSIAKEAFVSIRQAHXXDIPHI |||||
|||||||||||||||||||||||| ||||| a040
LISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHI 250
260 270 280 290 300 280 290 300 310 320 330 m040.pep
AALIRPLEEQGILLHRXREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVS
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| a040
AALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVS 310
320 330 340 350 360 340 350 360 370 380 390 m040.pep
PQXQDGGYGERXLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDY ||
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a040
PQAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDY 370
380 390 400 410 420 400 410 m040.pep RSNGRNSHILVRRLHRX
||||||||||||||||| a040 RSNGRNSHILVRRLHRX 430
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 040
shows 88.3% identity over a 436 aa overlap with a predicted ORF
(ORF 040.ng) from N. gonorrhoeae:
TABLE-US-00301 m040/g040 m040.pep
MSAPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLAADIGLLSQLGIRLVLI 60
|:||| ||||||||:|||||||| ||||||| ||||| |||||||||||||||||||||| g040
MNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLI 60
m040.pep
HGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTVRSRFEAALCGSVSGFARA 120
||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| g040
HGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALCGSVSGFARA 120
m040.pep
PSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWLPPLGHSYSGK 180
|||||||||||||||:|||||||||||||||||||||||||||||||||:|||||||:|| g040
PSVPLVSGNFLTARPMGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGK 180
m040.pep
TFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAGGQTRR 240 ||
|||:|:|||:|||||||||||||||||||||||||||||||||||||||||:::||| g040
TFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAASETRR 240
m040.pep
LISSA------------------------ELFTRNGIGTSIAKEAFVSIRQAHXXDIPHI 276
||||| |||||||||||||||||||||||| ||||| g040
LISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHI 300
m040.pep
AALIRPLEEQGILLHRXREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVS 336
|||||||||||:|||| ||||||||||||||||||:|||||||||||||||||||||||| g040
AALIRPLEEQGVLLHRSREYLENHISEFSILEHDGDLYGCAALKTFAEADCGEIACLAVS 360
m040.pep
PQXQDGGYGERXLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDY 396 ||
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| g040
PQAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDY 420
m040.pep RSNGRNSHILVRRLHRX 413 |||||| |||||||||| g040
RSNGRNPHILVRRLHRX 437
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 153>:
TABLE-US-00302 g041.seq 1 ATGAGTTCGC CCAAACACAT CGGCTTGCAG
GGCGGCAGCA ACGGCGGCCT 51 GATTACCGCC GCCGCCTTCG TGCGCGAACC
GCAAAGCATC GGTGCGCTGG 101 TGTGCGAAGT ACCGCTGACC GATATGATCC
GTTATCCGCT GCTGTCCGCC 151 GGTTCAAGTT GGACGGACGA ATACGGCAAT
CCGCAGAAAT ACGAAGCCTG 201 CAAACGCCGG CTGGGCGAAT TGTCGCCGTA
TCACAATCTT TCAGACGGCA 251 TCGATTATCC GCCCGCACTC ATTACCACCA
GCCTCAGCGA CGACCGCGTC 301 CATCCCGCCC ACGCGCTCAA ATTCTACGCC
AAACTGCGCG AAACCTCGCC 351 GCAATCTTGG CTCTACTCGC CTGACGGCGG
CGGCCATACC GGCAACGGCA 401 CCCAACGCGA ATCCGCCGAC AAACTCGCCT
GCGTGTTGCT GTTTTTGAAA 451 GAATTTTTGG GATAA
This corresponds to the amino acid sequence <SEQ ID 154; ORF
041.ng>:
TABLE-US-00303 g041.pep 1 MSSPKHIGLQ GGSNGGLITA AAFVREPQSI
GALVCEVPLT DMIRYPLLSA 51 GSSWTDEYGN PQKYEACKRR LGELSPYHNL
SDGIDYPPAL ITTSLSDDRV 101 HPAHALKFYA KLRETSPQSW LYSPDGGGHT
GNGTQRESAD KLACVLLFLK 151 EFLG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 155>:
TABLE-US-00304 m041.seq 1 ATCAGTTCGC CCGAACACAT CGGCTTGCAG
GGCGGCAGCA ACGGCGGACT 51 GATTACTGCC GCCGCCTTCG TGCGCGAACC
GCAAAGCATC GGCGCGCTGG 101 TGTGCGAAGT GCCGCTGACC GACATGATCC
GTTATCCGCT GCTCTCCGCC 151 GGTTCAAGCT GGACAGACGA ATACGGCAAT
CCGCAAAAAT ACGAAGTCTG 201 CAAACGCCGG TTGGGCGAAT TGTCGCCGTA
TCACAATCTT TCAGACGGCA 251 TCGATTATCC GCCCGCGCTC ATTACCACCA
GCCTGTCCGA CGATCGCGTC 301 CATCCCGCCC ACGCGCTCAA GTTCTACGCC
AAACTGCGCG AAACCTCCGC 351 GCAATCTTGG CTCTACTCGC CTGACGGCGG
CGGCCATACC GGCAACGGCA 401 CCCAACGCGA ATCCGCCGAC GAACTCGCCT
GCGTCTTGCT GTTTTTGAAA 451 GAGTTTTTGG GCTAA
This corresponds to the amino acid sequence <SEQ ID 156; ORF
041>:
TABLE-US-00305 m041.pep 1 ISSPEHIGLQ GGSNGGLITA AAFVREPQSI
GALVCEVPLT DMIRYPLLSA 51 GSSWTDEYGN PQKYEVCKRR LGELSPYHNL
SDGIDYPPAL ITTSLSDDRV 101 HPAHALKFYA KLRETSAQSW LYSPDGGGHT
GNGTQRESAD ELACVLLFLK 151 EFLG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 157>:
TABLE-US-00306 a041.seq 1 ATCAGTTCGC CCGAACACAT CGGCTTGCAG
GGCGGCAGCA ACGGCGGACT 51 GATTACTGCC GCCGCCTTCG TGCGCGAACC
GCAAAGCATA GGCGCGCTGG 101 TGTGCGAAGT GCCGCTGACC GACATGATCC
GTTATCCGCT GCTCTCCGCC 151 GGTTCAAGCT GGACAGACGA ATACGGCAAT
CCGCAAAAAT ACGAAGTCTG 201 CAAACGCCGG TTGGGCGAAT TGTCGCCGTA
TCACAATCTT TCAGACGGCA 251 TCGATTATCC GCCCGCGCTC ATTACCACCA
GCCTGTCCGA CGATCGCGTC 301 CATCCCGCCC ACGCGCTCAA GTTCTACGCC
AAACTGCGCG AAACCTCGCC 351 GCAATCTTGG CTCTACTCGC CTGACGGCGG
CGGCCATACC GGCAACGGCA 401 CGCAGCGCGA AGCCGCCGAC GAACTCGCCT
GCGTGTTGCT GTTTTTGAAA 451 GAGTTTTTGG GCTAA
This corresponds to the amino acid sequence <SEQ ID 158; ORF
041.a>:
TABLE-US-00307 a041.pep 1 ISSPEHIGLQ GGSNGGLITA AAFVREPQSI
GALVCEVPLT DMIRYPLLSA 51 GSSWTDEYGN PQKYEVCKRR LGELSPYHNL
SDGIDYPPAL ITTSLSDDRV 101 HPAHALKFYA KLRETSPQSW LYSPDGGGHT
GNGTQREAAD ELACVLLFLK 151 EFLG* m041/a041 98.7% identity over a 154
aa overlap 10 20 30 40 50 60 m041.pep
ISSPEHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a041
ISSPEHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGN 10 20
30 40 50 60 70 80 90 100 110 120 m041.pep
PQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| a041
PQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALKFYAKLRETSPQSW 70 80
90 100 110 120 130 140 150 m041.pep
LYSPDGGGHTGNGTQRESADELACVLLFLKEFLGX
|||||||||||||||||:||||||||||||||||| a041
LYSPDGGGHTGNGTQREAADELACVLLFLKEFLGX 130 140 150
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 041
shows 96.8% identity over a 154 aa overlap with a predicted ORF
(ORF 041.ng) from N. gonorrhoeae:
TABLE-US-00308 m041/g041 10 20 30 40 50 60 m041.pep
ISSPEHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGN
:|||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| g041
MSSPKHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGN 10 20
30 40 50 60 70 80 90 100 110 120 m041.pep
PQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSW
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||| ||| g041
PQKYEACKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALKFYAKLRETSPQSW 70 80
90 100 110 120 130 140 150 m041.pep
LYSPDGGGHTGNGTQRESADELACVLLFLKEFLGX
||||||||||||||||||||:|||||||||||||| g041
LYSPDGGGHTGNGTQRESADKLACVLLFLKEFLGX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 159>:
TABLE-US-00309 g041-1.seq 1 ATGAAATCCT ACCCCGACCC CTACCGCCAT
TTTGAAAACC TCGATTCCGC 51 CGAAACGCAA AACTTCGCTG CTGAAGCGAA
TGCCGAAACG CGCGCGCGTT 101 TTTTAAACAA CGACAAGGCG CGCGCACTTT
CAGACGGCAT TTTGAATCAA 151 ATGCAGGACA CGCGGCAGAT TCCGTTTTGT
CAGGAACACC GCGCGCGGAT 201 GTACCATTTC CATCAGAATG CGGAATATCC
GAAGGGCGTG TACCGCATGT 251 GTACGGCGGC GACCTACCGT TCCGGCTATC
CCGAGTGGAA AATCCTGTTT 301 TCGGTGGCGG ATTTCGATGA GTTGCTCGGC
GACGATGTGT ATTTGGGCGG 351 CGTGTCGCAC TTGGTGGAGC AGCCCAACCG
CGCGCTGCTG ACTTTGAACA 401 AATCGGGCGG CGATACGGCG TATACGCTGG
AAGTGGATTT GGAAGCAGGG 451 GAATTGGTAG AGGGCGGTTT TCACTTTCCG
GCAGGCAAAA ACCATGTGTC 501 GTGGCGCGAT GAAAACAGCG TGTGGGTGTG
TCCGGCTTGG GACGAACGCC 551 AGTTGACCGA ATCGGGCTAT CCGCGCGAAG
TGTGGCTGGT GGAACGCGGC 601 AAGAGTTTCG AGGAAAGCCT GCCGGCGTAC
CAAATCGATA AAGGCGCGAT 651 GATGGTAAAC GCGTGGCGTT ACCTCGATCC
GCAGGGTTCG CCGATTGATT 701 TGATTGAAGC GTCGGACGGT TTTTACACCA
AGACGTATTT GCAGGTGTCG 751 TCCGAAGGCG GGGCGAAACC GTTGAACCTG
CCTAATGATT GCGATGTGGT 801 CGGCTATCTG GCGGGACATC TTTTGCTGAC
GCTGCGCAAG GACTGGCACC 851 GCGCGAACCA AAGCTATCCG AGTGGCGCGT
TGGTGGCGGT GAAACTGAAT 901 CGGGGCGAAC TCGGGGCGGC GCAGCTTTTG
TTTGCGCCCG ATGAAACGCA 951 GGCATTGGAA AGCGTGGAAA CGACCAAGCG
TTTTGTGGTG GCAAGCCTGC 1001 TGGAGAATGT ACAAGGCCGT CTGAAAGCGT
GGCGGTTTGC CGACAGCAAA 1051 TGGCAGGAAG CCGAGTTGCC GCACCTGCCC
TCGGGCGCGT TGGAAATGAC 1101 CGACCAACCG TGGGGCGGCG ACGTGGTTTA
TCTTGCCGCC AGCGATTTCA 1151 CCACGCCGCT GACGCTGTTT GCGCTGGATT
TGAACGTGAT GGAACTGACC 1201 GTCATGCGCC TCCAGCCGCA GCAGTTTGTT
TCAGACGGCA TCGAAGTGCG 1251 GCAGTTTTGG GCGGTGTCGT CCGACGGCGA
ACGCATTCCT TATTTCCACG 1301 TCGGCAAAAA CGCCGCGCCC GACACGCCGA
CCTTAGTCTA TGCTTACGGA 1351 GGTTTCGGCA TTCCTGAATT GCCGCATTAT
CTGGGCAGCG TCGGCAAATA 1401 TTGGCTGGAA GAGGGCAATG CCTTTGTATT
GGCAAACATC CGCGGCGGCG 1451 GAGAATTCGG CCCGCGCTGG CATCAGGCGG
CGCAGGGAAT CAGCAAACAC 1501 AAAAGCGTTG ATGATTTGTT GGCAGTCGTG
CGTGATTTGT CCGAACGCGG 1551 CATGAGTTCG CCCAAACACA TCGGCTTGCA
GGGCGGCAGC AACGGCGGCC 1601 TGATTACCGC CGCCGCCTTC GTGCGCGAAC
CGCAAAGCAT CGGTGCGCTG 1651 GTGTGCGAAG TACCGCTGAC CGATATGATC
CGTTATCCGC TGCTGTCCGC 1701 CGGTTCAAGT TGGACGGACG AATACGGCAA
TCCGCAGAAA TACGAAGCCT 1751 GCAAACGCCG GCTGGGCGAA TTGTCGCCGT
ATCACAATCT TTCAGACGGC 1801 ATCGATTATC CGCCCGCACT CATTACCACC
AGCCTCAGCG ACGACCGCGT 1851 CCATCCCGCC CACGCGCTCA AATTCTACGC
CAAACTGCGC GAAACCTCGC 1901 CGCAATCTTG GCTCTACTCG CCTGACGGCG
GCGGCCATAC CGGCAACGGC 1951 ACCCAACGCG AATCCGCCGA CAAACTCGCC
TGCGTGTTGC TGTTTTTGAA 2001 AGAATTTTTG GGATAA
This corresponds to the amino acid sequence <SEQ ID 160; ORF
041-1.ng>:
TABLE-US-00310 g041-1.pep 1 MKSYPDPYRH FENLDSAETQ NFAAEANAET
RARFLNNDKA RALSDGILNQ 51 MQDTRQIPFC QEHRARMYHF HQNAEYPKGV
YRMCTAATYR SGYPEWKILF 101 SVADFDELLG DDVYLGGVSH LVEQPNRALL
TLNKSGGDTA YTLEVDLEAG 151 ELVEGGFHFP AGKNHVSWRD ENSVWVCPAW
DERQLTESGY PREVWLVERG 201 KSFEESLPAY QIDKGAMMVN AWRYLDPQGS
PIDLIEASDG FYTKTYLQVS 251 SEGGAKPLNL PNDCDVVGYL AGHLLLTLRK
DWHRANQSYP SGALVAVKLN 301 RGELGAAQLL FAPDETQALE SVETTKRFVV
ASLLENVQGR LKAWRFADSK 351 WQEAELPHLP SGALEMTDQP WGGDVVYLAA
SDFTTPLTLF ALDLNVMELT 401 VMRLQPQQFV SDGIEVRQFW AVSSDGERIP
YFHVGKNAAP DTPTLVYAYG 451 GFGIPELPHY LGSVGKYWLE EGNAFVLANI
RGGGEFGPRW HQAAQGISKH 501 KSVDDLLAVV RDLSERGMSS PKHIGLQGGS
NGGLITAAAF VREPQSIGAL 551 VCEVPLTDMI RYPLLSAGSS WTDEYGNPQK
YEACKRRLGE LSPYHNLSDG 601 IDYPPALITT SLSDDRVHPA HALKFYAKLR
ETSPQSWLYS PDGGGHTGNG 651 TQRESADKLA CVLLFLKEFL G*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 161>:
TABLE-US-00311 m041-1.seq 1 ATGAAATCCT ACCCCGACCC CTACCGCCAT
TTTGAAAACC TCGATTCCGC 51 CGAAACGCAA AACTTCGCTG CTGAAGCGAA
TGCCGAAACG CGCGCGCGTT 101 TTTTAGAAAA CGACAAGGCG CGCGCGCTTT
CAGACGGCAT TTTGGCGCAG 151 TTGCAGGACA CGCGGCAGAT TCCGTTTTGT
CAGGAACACC GCGCGCGGAT 201 GTACCATTTC CATCAGGACG CGGAGTATCC
GAAGGGCGTG TACCGCGTGT 251 GTACCGCGGC GACGTATCGT TCCGGCTATC
CCGAGTGGAA AATCCTGTTT 301 TCGGTGGCGG ATTTCGACGA ATTGCTTGGC
GACGATGTGT ATTTGGGCGG 351 CGTGTCGCAC TTGGTGGAAC AGCCCAACCG
CGCGTTGTTA ACACTGAGCA 401 AATTGGGCAG CGATACGGCG TACACGCTGG
AAGTGGATTT GGAAGCAGGG 451 GAGTTGGTCG AAGGCGGTTT TCACTTTCCG
GCAGGCAAAA ACCATGTGTC 501 GTGGCGCGAT GAAAACAGCG TGTGGGTGTG
TCCGGCTTGG AACGAACGCC 551 AGTTGACCCA ATCGGGCTAT CCGCGCGAAG
TATGGCTGGT GGAACGCGGC 601 AAGAGTTTCG AGGAAAGCCT GCCTGTGTAT
CAAATCGGCG AAGACGGCAT 651 GATGGTGAAC GCGTGGCGTT ATCTCGATCC
GCAGGGTTCG CCGATTGATT 701 TGATTGAAGC GTCGGACGGT TTTTACACCA
AAACCTATTT GCGGGTCTCA 751 GCCGAAGGCG AGGCGAAACC GTTAAACCTG
CCCAACGATT GCGACGTGGT 801 CGGCTATCTG GCGGGGCATC TTTTGCTGAC
GCTGCGCAAG GACTGGAACC 851 GCGCGAACCA AAGCTATCCG AGCGGCGCGC
TGGTGGCGGT GAAGCTGAAT 901 CGGGGCGAAC TCGGGGCGGC GCAGCTTTTG
TTTGCGCCCG ATGAAACGCA 951 GGCATTGGAA AGCGTGGAAA CGACCAAGCG
TTTTGTGGTG GCGAGCCTGT 1001 TGGAGAACGT ACAAGGCCGT CTGAAAGCAT
GGCGGTTTGC CGACGGCAAA 1051 TGGCAGGAAG TCGAATTGCC GCGCCTGCCT
TCGGGCGCGT TGGAAATGAC 1101 CGACCAACCT TGGGGCGGCG ACGTGGTTTA
CCTTGCCGCC AGCGATTTCA 1151 CCACGCCGCT GACGCTGTTT GCGCTGGATT
TGAACGTGAT GGAACTGACC 1201 GTCATGCGCC GCCAGCCGCA GCAGTTTGAT
TCAGACGGCA TTAACGTGCA 1251 GCAGTTTTGG ACGACTTCGG CTGACGGCGA
GCGCATTCCT TATTTCCACG 1301 TCGGCAAAAA CGCCGCGCCC GACATGCCGA
CGCTGGTCTA TGCCTACGGC 1351 GGTTTCGGCA TTCCCGAATT GCCGCATTAT
CTGGGCAGCA TTGGCAAATA 1401 TTGGCTGGAA GAGGGCAATG CCTTTGTATT
GGCGAACATC CGCGGCGGCG 1451 GCGAGTTCGG CCCGCGCTGG CATCAGGCGG
CGCAGGGAAT CAGCAAACAT 1501 AAAAGCGTTG ATGATTTATT GGCAGTCGTG
CGCGATTTGT CCGAACGCGG 1551 TATCAGTTCG CCCGAACACA TCGGCTTGCA
GGGCGGCAGC AACGGCGGAC 1601 TGATTACTGC CGCCGCCTTC GTGCGCGAAC
CGCAAAGCAT CGGCGCGCTG 1651 GTGTGCGAAG TGCCGCTGAC CGACATGATC
CGTTATCCGC TGCTCTCCGC 1701 CGGTTCAAGC TGGACAGACG AATACGGCAA
TCCGCAAAAA TACGAAGTCT 1751 GCAAACGCCG GTTGGGCGAA TTGTCGCCGT
ATCACAATCT TTCAGACGGC 1801 ATCGATTATC CGCCCGCGCT CATTACCACC
AGCCTGTCCG ACGATCGCGT 1851 CCATCCCGCC CACGCGCTCA AGTTCTACGC
CAAACTGCGC GAAACCTCCG 1901 CGCAATCTTG GCTCTACTCG CCTGACGGCG
GCGGCCATAC CGGCAACGGC 1951 ACCCAACGCG AATCCGCCGA CGAACTCGCC
TGCGTCTTGC TGTTTTTGAA 2001 AGAGTTTTTG GGCTAA
This corresponds to the amino acid sequence <SEQ ID 162; ORF
041-1>:
TABLE-US-00312 m041-1.pep 1 MKSYPDPYRH FENLDSAETQ NFAAEANAET
RARFLENDKA RALSDGILAQ 51 LQDTRQIPFC QEHRARMYHF HQDAEYPKGV
YRVCTAATYR SGYPEWKILF 101 SVADFDELLG DDVYLGGVSH LVEQPNRALL
TLSKLGSDTA YTLEVDLEAG 151 ELVEGGFHFP AGKNHVSWRD ENSVWVCPAW
NERQLTQSGY PREVWLVERG 201 KSFEESLPVY QIGEDGMMVN AWRYLDPQGS
PIDLIEASDG FYTKTYLRVS 251 AEGEAKPLNL PNDCDVVGYL AGHLLLTLRK
DWNRANQSYP SGALVAVKLN 301 RGELGAAQLL FAPDETQALE SVETTKRFVV
ASLLENVQGR LKAWRFADGK 351 WQEVELPRLP SGALEMTDQP WGGDVVYLAA
SDFTTPLTLF ALDLNVMELT 401 VMRRQPQQFD SDGINVQQFW TTSADGERIP
YFHVGKNAAP DMPTLVYAYG 451 GFGIPELPHY LGSIGKYWLE EGNAFVLANI
RGGGEFGPRW HQAAQGISKH 501 KSVDDLLAVV RDLSERGISS PEHIGLQGGS
NGGLITAAAF VREPQSIGAL 551 VCEVPLTDMI RYPLLSAGSS WTDEYGNPQK
YEVCKRRLGE LSPYHNLSDG 601 IDYPPALITT SLSDDRVHPA HALKFYAKLR
ETSAQSWLYS PDGGGHTGNG 651 TQRESADELA CVLLFLKEFL G* m041-1/g041-1
94.6% identity in 671 aa overlap 10 20 30 40 50 60 m041-1.pep
MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALSDGILAQLQDTRQIPFC
|||||||||||||||||||||||||||||||||||:|||||||||||| |:||||||||| g041-1
MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALSDGILNQMQDTRQIPFC 10 20
30 40 50 60 70 80 90 100 110 120 m041-1.pep
QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH
||||||||||||:|||||||||:||||||||||||||||||||||||||||||||||||| g041-1
QEHRARMYHFHQNAEYPKGVYRMCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH 70 80
90 100 110 120 130 140 150 160 170 180 m041-1.pep
LVEQPNRALLTLSKLGSDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW
||||||||||||:| |:||||||||||||||||||||||||||||||||||||||||||| g041-1
LVEQPNRALLTLNKSGGDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW 130
140 150 160 170 180 190 200 210 220 230 240 m041-1.pep
NERQLTQSGYPREVWLVERGKSFEESLPVYQIGEDGMMVNAWRYLDPQGSPIDLIEASDG
:|||||:|||||||||||||||||||||:||| : :|||||||||||||||||||||||| g041-1
DERQLTESGYPREVWLVERGKSFEESLPAYQIDKGAMMVNAWRYLDPQGSPIDLIEASDG 190
200 210 220 230 240 250 260 270 280 290 300 m041-1.pep
FYTKTYLRVSAEGEAKPLNLPNDCDVVGYLAGHLLLTLRKDWNRANQSYPSGALVAVKLN
|||||||:||:|| ||||||||||||||||||||||||||||:||||||||||||||||| g041-1
FYTKTYLQVSSEGGAKPLNLPNDCDVVGYLAGHLLLTLRKDWHRANQSYPSGALVAVKLN 250
260 270 280 290 300 310 320 330 340 350 360 m041-1.pep
RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFADGKWQEVELPRLP
||||||||||||||||||||||||||||||||||||||||||||||||:||||:|||:|| g041-1
RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFADSKWQEAELPHLP 310
320 330 340 350 360 370 380 390 400 410 420 m041-1.pep
SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFDSDGINVQQFW
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||:|:||| g041-1
SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRLQPQQFVSDGIEVRQFW 370
380 390 400 410 420 430 440 450 460 470 480 m041-1.pep
TTSADGERIPYFHVGKNAAPDMPTLVYAYGGFGIPELPHYLGSIGKYWLEEGNAFVLANI
::|:||||||||||||||||| |||||||||||||||||||||:|||||||||||||||| g041-1
AVSSDGERIPYFHVGKNAAPDTPTLVYAYGGFGIPELPHYLGSVGKYWLEEGNAFVLANI 430
440 450 460 470 480 490 500 510 520 530 540 m041-1.pep
RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGISSPEHIGLQGGSNGGLITAAAF
|||||||||||||||||||||||||||||||||||||:|||:|||||||||||||||||| g041-1
RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGMSSPKHIGLQGGSNGGLITAAAF 490
500 510 520 530 540 550 560 570 580 590 600 m041-1.pep
VREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDG
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| g041-1
VREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEACKRRLGELSPYHNLSDG 550
560 570 580 590 600 610 620 630 640 650 660 m041-1.pep
IDYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSWLYSPDGGGHTGNGTQRESADELA
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||:|| g041-1
IDYPPALITTSLSDDRVHPAHALKFYAKLRETSPQSWLYSPDGGGHTGNGTQRESADKLA 610
620 630 640 650 660 670 m041-1.pep CVLLFLKEFLGX |||||||||||| g041-1
CVLLFLKEFLGX 670 m041-1/P55577 sp|P55577|Y4NA_RHISN PROBABLE
PEPTIDASE Y4NA >gi|2182536 (AE000086) Y4nA [Rhizobium sp.
NGR234] Length = 726 Score = 370 bits (940), Expect = e-101
Identities = 217/682 (31%), Positives = 331/682 (47%), Gaps =
22/682 (3%) Query: 2
KSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALSDGILAQLQDTRQIPFCQ 61 K
DP + +D + + N T + ++ + L LQ T +I Sbjct: 42
KDASDPRAYLNEIDGDKAMTWVEAHNLSTVDKLSKDPRYSEYQADALTILQATDRIASPS 101
Query: 62
EHRARMY-HFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH 120 R
M +F QD + +G++R T +YRSG P+W+ + V + G G Sbjct: 102
FARDGMIDNFWQDGTHVQGLWRRTTWESYRSGNPQWRTILDVDALSKAEGKTWVFEGGDC 161
Query: 121
LVEQPNRALLTLSKLGSDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW 180 L
N L+ LS G D E D+ GE V+ GF P GK V+W DEN+++V W Sbjct: 162
LPPTSNLCLIRLSDGGKDADVVREFDIAKGEFVKEGFVLPEGKQSVTWVDENTIYVTREW 221
Query: 181
NERQLTQSGYPREVWLVERGKSFEESLPVYQ------IGEDGMM--VNAWRYLDPQGSPI 232
++T SGY +V+RG+S ++++ +++ E G++ ++ +D + Sbjct: 222
TPGEVTSSGYAYVTKVVKRGQSLDQAVEIFRGQKKDVSAERGVLRDIDGKYVMDTSYRGL 281
Query: 233
DLIEASDGFYTKTYLRVSAEGEAKPLNLPNDCDVVGYLAGHLLLTLRKDWNRANQS-YPS 291 D
FY + + L LP GY G + L+ DW A + + + Sbjct: 282
DFFNTELAFYPNGH----PDTRKVVLPLPTTAVFSGYYKGQAIYWLKSDWTSAKGTVFHN 337
Query: 292
GALVAVKLNRGELGAAQL----LFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFA 347
GA++A L A++ LF P+E Q++ TK +V S+L NV ++++ F Sbjct: 338
GAIIAFDLKAALADPARVEPLVLFMPNEHQSVAGTTQTKNRLVLSILSNVTSEVRSFDFG 397
Query: 348
DGKWQEVELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQ 407 G
W +L + L +T D +++ + F P TLF D ++ + P Sbjct: 398
KGGWSSFKLALPENSTLSLTSSDDESDQLFVFSEGFLEPSTLFCADAATGQVEKITSTPA 457
Query: 408
QFDSDGINVQQFWTTSADGERIPYFHVGKNAAP---DMPTLVYAYGGFGIPELPHYLGSI 464
+FD+ G+ QQFW TS DG ++PYF V + PT++YAYGGF IP P Y + Sbjct: 458
RFDAGGLQAQQFWATSKDGTKVPYFLVARKDVKLDGTNPTILYAYGGFQIPMQPSYSAVL 517
Query: 465
GKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGISSPEHI 524 GK
WLE+G A+ LANIRGGGEFGP+WH A ++ + DD AV +DL + ++S H+ Sbjct: 518
GKLWLEKGGAYALANIRGGGEFGPKWHDAGLKTNRQRVYDDFQAVAQDLIAKKVTSTPHL 577
Query: 525
GLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEVC 584 G+
GGSNGGL+ ++ P A+V +VPL DM+ + +SAG+SW EYG+P V Sbjct: 578
GIMGGSNGGLLMGVQMIQRPDLWNAVVIQVPLLDMVNFTRMSAGASWQAEYGSPDD-PVE 636
Query: 585
KRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSWLYSPDGG 644 L
+SPYHN+ G+ YP TS DDRV P HA K A + + Y G Sbjct: 637
GAFLRSISPYHNVKAGVAYPEPFFETSTKDDRVGPVHARKMAALFEDMGLPFYYYENIEG 696
Query: 645 GHTGNGTQRESADELACVLLFL 666 GH +E A A +++ Sbjct: 697
GHAAAANLQEHARRYALEYIYM 718
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 163>:
TABLE-US-00313 a041-1.seq 1 ATGAAATCCT ACCCCGACCC CTACCGCCAT
TTTGAAAACC TCGATTCCGC 51 CGAAACGCAA AACTTCGCTG CTGAAGCGAA
TGCCGAAACG CGCGCGCGTT 101 TTTTAAACAA CGACAAGGCA CGCGCATTGT
CTGACGGCAT TTTGGCGCAG 151 TTGCAGGACA CGCGGCAAAT TCCGTTTTGT
CAGGAACACC GCGCGCGGAT 201 GTACCATTTC CATCAAGATG CGGAATATCC
GAAAGGCGTG TACCGCGTGT 251 GTACCGCGGC GACTTACCGT TCGGGCTATC
CTGAGTGGAA AATCCTGTTT 301 TCGGTGGCGG ATTTCGACGA ATTGCTCGGT
GACGATGTAT ATCTAGGCGG 351 CGTGTCGCAC CTGGTGGAAC AGCCCAACCG
CGCGTTGTTA ACACTGAGCA 401 AATCGGGCGG CGATACCGCG TACACGCTGG
AAGTGGATTT GGAAGCAGGG 451 GAGTTGGTAG AAGGCGGTTT TCACTTTCCG
GCAGGCAAAA ACCATGTGTC 501 GTGGCGCGAT GAAAACAGCG TGTGGGTGTG
TCCGGCTTGG GACGAACGCC 551 AGTTGACCGA ATCGGGCTAT CCGCGCGAGG
TGTGGCTGGT GGAACGCGGC 601 AAGAGTTTCG AGGAAAGCCT GCCGGTGTAC
CAAATTGCTG AAGACGGCAT 651 GATGGTGAAC GCGTGGCGTT ACCTCGATCC
GCAGGGTTCG CCGATTGATT 701 TGATTGAAGC GTCTGACGGT TTTTACACCA
AAACCTATTT GCAGGTCTCA 751 GCCGAAGGCG AAGCGAAACC GTTAAACCTG
CCCAACGATT GCGACGTAGT 801 CGGCTATCTG GCCGGACATC TTTTGCTGAC
CTTGCGTAAA GACTGGCACC 851 GCGCGAACCA AAGCTATCCG AGTGGCGCAT
TGGTAGCAGT AAAATTAAAC 901 CGCGGCGAAT TGGGCGCGGC GCAGCTTTTG
TTTGCGCCCA ATGAAACGCA 951 GGCATTGGAA AGCGTGGAAA CGACCAAGCG
TTTTGTCGTG GCGAGCCTGC 1001 TGGAAAACGT ACAGGGTCGT CTGAAAGCGT
GGCGTTTTAC TGATGGCAAA 1051 TGGCAGGAAA CCGAGTTGCC GCGCCTGCCT
TCGGGCGCGT TGGAAATGAC 1101 CGACCAACCG TGGGGGGGCG ACGTAGTTTA
CCTTGCCGCC AGCGATTTCA 1151 CCACGCCGCT GACGCTGTTT GCATTGGATT
TGAACGTGAT GGAACTGACC 1201 GTCATGCGCC GCCAGCCGCA GCAGTTTGAT
TCAGACGGCA TTAACGTGCA 1251 GCAGTTTTGG ACGACTTCGG CTGACGGCGA
GCGCATTCCT TATTTCCACG 1301 TCGGCAAAAA CGCCGCGCCC GACATGCCGA
CGCTGGTCTA TGCCTACGGC 1351 GGTTTCGGCA TTCCCGAATT GCCGCATTAT
CTGGGCAGCA TTGGCAAATA 1401 TTGGCTGGAA GAGGGCAATG CCTTTGTATT
GGCGAACATC CGCGGCGGCG 1451 GCGAGTTCGG CCCGCGCTGG CATCAGGCGG
CGCAGGGAAT CAGCAAACAT 1501 AAAAGCGTTG ATGATTTATT GGCAGTCGTG
AGCGATTTGT CCGAACGCGG 1551 TATCAGTTCG CCCGAACACA TCGGCTTGCA
GGGCGGCAGC AACGGCGGAC 1601 TGATTACTGC CGCCGCCTTC GTGCGCGAAC
CGCAAAGCAT AGGCGCGCTG 1651 GTGTGCGAAG TGCCGCTGAC CGACATGATC
CGTTATCCGC TGCTCTCCGC 1701 CGGTTCAAGC TGGACAGACG AATACGGCAA
TCCGCAAAAA TACGAAGTCT 1751 GCAAACGCCG GTTGGGCGAA TTGTCGCCGT
ATCACAATCT TTCAGACGGC 1801 ATCGATTATC CGCGCGCGCT CATTACCACC
AGCCTGTCCG ACGATCGCGT 1851 CCATCCCGCC CACGCGCTCA AGTTCTACGC
CAAACTGCGC GAAACCTCGC 1901 CGCAATCTTG GCTCTACTCG CCTGACGGCG
GCGGCCATAC CGGCAACGGC 1951 ACGCAGCGCG AAGCCGCCGA CGAACTCGCC
TGCGTGTTGC TGTTTTTGAA 2001 AGAGTTTTTG GGCTAA
This corresponds to the amino acid sequence <SEQ ID 164; ORF
041-1.a>:
TABLE-US-00314 a041-1.pep 1 MKSYPDPYRH FENLDSAETQ NFAAEANAET
RARFLNNDKA RALSDGILAQ 51 LQDTRQIPFC QEHRARMYHF HQDAEYPKGV
YRVCTAATYR SGYPEWKILF 101 SVADFDELLG DDVYLGGVSH LVEQPNRALL
TLSKSGGDTA YTLEVDLEAG 151 ELVEGGFHFP AGKNHVSWRD ENSVWVCPAW
DERQLTESGY PREVWLVERG 201 KSFEESLPVY QIAEDGMMVN AWRYLDPQGS
PIDLIEASDG FYTKTYLQVS 251 AEGEAKPLNL PNDCDVVGYL AGHLLLTLRK
DWHRANQSYP SGALVAVKLN 301 RGELGAAQLL FAPNETQALE SVETTKRFVV
ASLLENVQGR LKAWRFTDGK 351 WQETELPRLP SGALEMTDQP WGGDVVYLAA
SDFTTPLTLF ALDLNVMELT 401 VMRRQPQQFD SDGINVQQFW TTSADGERIP
YFHVGKNAAP DMPTLVYAYG 451 GFGIPELPHY LGSIGKYWLE EGNAFVLANI
RGGGEFGPRW HQAAQGISKH 501 KSVDDLLAVV SDLSERGISS PEHIGLQGGS
NGGLITAAAF VREPQSIGAL 551 VCEVPLTDMI RYPLLSAGSS WTDEYGNPQK
YEVCKRRLGE LSPYHNLSDG 601 IDYPPALITT SLSDDRVHPA HALKFYAKLR
ETSPQSWLYS PDGGGHTGNG 651 TQREAADELA CVLLFLKEFL G* a041-1/m041-1
97.9% identity in 671 aa overlap 10 20 30 40 50 60 a041-1.pep
MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALSDGILAQLQDTRQIPFC
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| m041-1
MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALSDGILAQLQDTRQIPFC 10 20
30 40 50 60 70 80 90 100 110 120 a041-1.pep
QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m041-1
QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH 70 80
90 100 110 120 130 140 150 160 170 180 a041-1.pep
LVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW
|||||||||||||| |:||||||||||||||||||||||||||||||||||||||||||| m041-1
LVEQPNRALLTLSKLGSDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW 130
140 150 160 170 180 190 200 210 220 230 240 a041-1.pep
DERQLTESGYPREVWLVERGKSFEESLPVYQIAEDGMMVNAWRYLDPQGSPIDLIEASDG
:|||||:|||||||||||||||||||||||||:||||||||||||||||||||||||||| m041-1
NERQLTQSGYPREVWLVERGKSFEESLPVYQIGEDGMMVNAWRYLDPQGSPIDLIEASDG 190
200 210 220 230 240 250 260 270 280 290 300 a041-1.pep
FYTKTYLQVSAEGEAKPLNLPNDCDVVGYLAGHLLLTLRKDWHRANQSYPSGALVAVKLN
|||||||:||||||||||||||||||||||||||||||||||:||||||||||||||||| m041-1
FYTKTYLRVSAEGEAKPLNLPNDCDVVGYLAGHLLLTLRKDWNRANQSYPSGALVAVKLN 250
260 270 280 290 300 310 320 330 340 350 360 a041-1.pep
RGELGAAQLLFAPNETQALESVETTKRFVVASLLENVQGRLKAWRFTDGKWQETELPRLP
|||||||||||||:||||||||||||||||||||||||||||||||:||||||:|||||| m041-1
RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFADGKWQEVELPRLP 310
320 330 340 350 360 370 380 390 400 410 420 a041-1.pep
SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFDSDGINVQQFW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m041-1
SGALEMTDQPWGGDVVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFDSDGINVQQFW 370
380 390 400 410 420 430 440 450 460 470 480 a041-1.pep
TTSADGERIPYFHVGKNAAPDMPTLVYAYGGFGIPELPHYLGSIGKYWLEEGNAFVLANI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m041-1
TTSADGERIPYFHVGKNAAPDMPTLVYAYGGFGIPELPHYLGSIGKYWLEEGNAFVLANI 430
440 450 460 470 480 490 500 510 520 530 540 a041-1.pep
RGGGEFGPRWHQAAQGISKHKSVDDLLAVVSDLSERGISSPEHIGLQGGSNGGLITAAAF
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| m041-1
RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGISSPEHIGLQGGSNGGLITAAAF 490
500 510 520 530 540 550 560 570 580 590 600 a041-1.pep
VREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m041-1
VREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDG 550
560 570 580 590 600 610 620 630 640 650 660 a041-1.pep
IDYPPALITTSLSDDRVHPAHALKFYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELA
||||||||||||||||||||||||||||||||| ||||||||||||||||||||:||||| m041-1
IDYPPALITTSLSDDRVHPAHALKFYAKLRETSAQSWLYSPDGGGHTGNGTQRESADELA 610
620 630 640 650 660 670 a041-1.pep CVLLFLKEFLGX |||||||||||| m041-1
CVLLFLKEFLGX 670
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 165>:
TABLE-US-00315 g042.seq 1 ATGACGATGA TTTGCTTGCG CTTCCAagcG
TTCGTGCCGC ATACCAGCGC 51 GTTATCCAAC ACTTCCACGG CAGCCGGCCC
TTCCTGCCCG ATGGCGGCGG 101 TGCGGTCGAT GATGAAAATC CAGCCGGGGT
TTTTCTCTTT GATGTATTCG 151 AAGGAAACGG GCTGCCCGTG CCCTTCGTTG
CGTAAAGATT CGTCCACGGG 201 CGGCAGGCCG ATGTCGCCGT GTATCCAACT
TGCCAACCGC GATTGCGTGC 251 CGAAGGCGGA CACCTTGTTG CCTGTAACCG
ACAGCACCAG CCCGCGTCCT 301 TTGCCTTTGG cggCTTCGCG CTTTTGGGCG
AACAGCGCGT CAATCTGCGC 351 ATTCAATTCC GCCACGCGCG CTTCCTTACC
GAAAATCCGC GACAGGGTCT 401 CCATCTGCTT CTCGCCGCTG GTGCGGATAT
TGCCGTTGTC CACCGTCAAA 451 TCTATGgtgG TCGCGTTTTT CGCCAACTGT
TCATACGCTT CCGCACCCGG 501 CCCGCCGGTA ATGACAAACT GCGGATTGTG
GCGGTGCAGG GATTCGCAAT 551 CGGGCTCAAA CAGCGTCCCC ACCGTTGCCG
CCTTGTCAAA TGCAGGCTGC 601 AAATAG
This corresponds to the amino acid sequence <SEQ ID 166; ORF
042.ng>:
TABLE-US-00316 g042.pep 1 MTMICLRFQA FVPHTSALSN TSTAAGPSCP
MAAVRSMMKI QPGFFSLMYS 51 KETGCPCPSL RKDSSTGGRP MSPCIQLANR
DCVPKADTLL PVTDSTSPRP 101 LPLAASRFWA NSASICAFNS ATRASLPKIR
DRVSICFSPL VRILPLSTVK 151 SMVVAFFANC SYASAPGPPV MTNCGLWRCR
DSQSGSNSVP TVAALSNAGC 201 K*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 167>:
TABLE-US-00317 m042.seq 1 ATGACGATGA TTTGCTTGCG CTTCCAAGCG
TTCGTGCCGC GTACCAGCGC 51 GTTATCCAmT ACTTCGACAG CCGcCGGCCy
TTCyTGCCCG ATGGCGGCGG 101 TACGGTCGAT GATGAAAATC CAATCGGGGT
TTTTCTCTTT GATGTATTCG 151 AAGGAAACAG GCTGCCCGTG CCCCTCGTTG
CGTAAAGATT CGTCTACAGG 201 CGGTAGGCCG ATGTCGCCGT GTATCCAACT
TGCCAACCGC GACTGCGTGC 251 CGAAGGCGGA CACCTTGTTG CCCGTAACCG
ACAGCACCAG CCCGCGTCCT 301 TTGCCTTTGG CGGCTTCGCG CGTTTGGGCG
AACAGCGCGT CAATCTGCGC 351 CTTCAATTCC GCCGCGCGCG CTTCCTTGCC
GAAAATCCGC GCCAAGGTCT 401 CCATCTGCTT TTCGCCGCTG GTGCGGATAT
TGCCGTTGTC CACCGTCAGA 451 TCTATGGTGG TCGCGTTTTT CGCTAACTGT
TCATACGCTT CCGCGCCCGG 501 CCCGCCGGTA ATGACAAGCT GAGGATTGTA
GCGGTGCAGG GCTTCGTAAT 551 CGGGCTCGAA CAGCGTCCCC ACCGTTGCCG
CCTTGTCAAA TGCAGGCTGC 601 AAATAA
This corresponds to the amino acid sequence <SEQ ID 168; ORF
042>:
TABLE-US-00318 m042.pep 1 MTMICLRFQA FVPRTSALSX TSTAAGXSCP
MAAVRSMMKI QSGFFSLMYS 51 KETGCPCPSL RKDSSTGGRP MSPCIQLANR
DCVPKADTLL PVTDSTSPRP 101 LPLAASRVWA NSASICAFNS AARASLPKIR
AKVSICFSPL VRILPLSTVR 151 SMVVAFFANC SYASAPGPPV MTSXGLXRCR
ASXSGSNSVP TVAALSNAGC 201 K*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 169>:
TABLE-US-00319 a042.seq 1 ATGACGATGA TTTGCTTGCG CTTCCAAGCG
TTCGTGCCGC GTACCAGCGC 51 GTTATCCAAT ACTTCGACAG CCGCCGGCCC
TTCCTGCCCG ATGGCGGCGG 101 TACGGTCGAT GATGAAAATC CAATCGGGGT
TTTTCTCTTT GATGTATTCG 151 AAGGAAACAG GCTGCCCGTG CCCCTCGTTG
CGTAAAGATT CGTCTACAGG 201 CGGTAGGCCG ATGTCGCCGT GTATCCAACT
TGCCAACCGC GACTGCGTGC 251 CGAAGGCGGA CACCTTGTTG CCCGTAACCG
ACAGCACCAG CCCGCGTCCT 301 TTGCCTTTGG CGGCTTCGCG CGTTTGGGCG
AACAGCGCGT CAATCTGCGC 351 CTTCAATTCC GCCGCGCGCG CTTCCTTGCC
GAAAATCCGC GCCAAGGTCT 401 CCATCTGCTT TTCGCCGCTG GTGCGGATAT
TGCCGTTGTC CACCGTCAGA 451 TCTATGGTGG TCGCGTTTTT CGCCAACTGT
TCATACGCTT CCGCGCCCGG 501 CCCGCCGGTA ATGACAAGCT GAGGATTGTA
GCGGTGCAGG GCTTCGTAAT 551 CGGGCTCGAA CAGCGTCCCC ACCGTTGCCG
CCTTGTCAAA TGCAGGCTGC 601 AAATAA
This corresponds to the amino acid sequence <SEQ ID 170; ORF
042.a>:
TABLE-US-00320 a042.pep 1 MTMICLRFQA FVPRTSALSN TSTAAGPSCP
MAAVRSMMKI QSGFFSLMYS 51 KETGCPCPSL RKDSSTGGRP MSPCIQLANR
DCVPKADTLL PVTDSTSPRP 101 LPLAASRVWA NSASICAFNS AARASLPKIR
AKVSICFSPL VRILPLSTVR 151 SMVVAFFANC SYASAPGPPV MTS*GL*RCR
AS*SGSNSVP TVAALSNAGC 201 K* m042/a042 99.0% identity over a 201 aa
overlap 10 20 30 40 50 60 m042.pep
MTMICLRFQAFVPRTSALSXTSTAAGXSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| a042
MTMICLRFQAFVPRTSALSNTSTAAGPSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL 10 20
30 40 50 60 70 80 90 100 110 120 m042.pep
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a042
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS 70 80
90 100 110 120 130 140 150 160 170 180 m042.pep
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSXGLXRCR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a042
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSXGLXRCR 130
140 150 160 170 180 190 200 m042.pep ASXSGSNSVPTVAALSNAGCKX
|||||||||||||||||||||| a042 ASXSGSNSVPTVAALSNAGCKX 190 200
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 042
shows 93.0% identity over a 201 aa overlap with a predicted ORF
(ORF 042.ng) from N. gonorrhoeae:
TABLE-US-00321 m042/g042 10 20 30 40 50 60 m042.pep
MTMICLRFQAFVPRTSALSXTSTAAGXSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL
|||||||||||||:||||| |||||| |||||||||||||| |||||||||||||||||| g042
MTMICLRFQAFVPHTSALSNTSTAAGPSCPMAAVRSMMKIQPGFFSLMYSKETGCPCPSL 10 20
30 40 50 60 70 80 90 100 110 120 m042.pep
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| g042
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRFWANSASICAFNS 70 80
90 100 110 120 130 140 150 160 170 180 m042.pep
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSXGLXRCR
|:|||||||| :|||||||||||||||||:||||||||||||||||||||||: || ||| g042
ATRASLPKIRDRVSICFSPLVRILPLSTVKSMVVAFFANCSYASAPGPPVMTNCGLWRCR 130
140 150 160 170 180 190 200 m042.pep ASXSGSNSVPTVAALSNAGCKX |
||||||||||||||||||| g042 DSQSGSNSVPTVAALSNAGCKX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 171>:
TABLE-US-00322 m042-1.seq 1 ATGACGATGA TTTGCTTGCG CTTCCAAGCG
TTCGTGCCGC GTACCAGCGC 51 GTTATCCAAT ACTTCGACAG CCGCCGGCCC
TTCCTGCCCG ATGGCGGCGG 101 TACGGTCGAT GATGAAAATC CAATCGGGGT
TTTTCTCTTT GATGTATTCG 151 AAGGAAACAG GCTGCCCGTG CCCCTCGTTG
CGTAAAGATT CGTCTACAGG 201 CGGTAGGCCG ATGTCGCCGT GTATCCAACT
TGCCAACCGC GACTGCGTGC 251 CGAAGGCGGA CACCTTGTTG CCCGTAACCG
ACAGCACCAG CCCGCGTCCT 301 TTGCCTTTGG CGGCTTCGCG CGTTTGGGCG
AACAGCGCGT CAATCTGCGC 351 CTTCAATTCC GCCGCGCGCG CTTCCTTGCC
GAAAATCCGC GCCAAGGTCT 401 CCATCTGCTT TTCGCCGCTG GTGCGGATAT
TGCCGTTGTC CACCGTCAGA 451 TCTATGGTGG TCGCGTTTTT CGCTAACTGT
TCATACGCTT CCGCGCCCGG 501 CCCGCCGGTA A
This corresponds to the amino acid sequence <SEQ ID 172; ORF
42-1>:
TABLE-US-00323 m042-1.pep 1 MTMICLRFQA FVPRTSALSN TSTAAGPSCP
MAAVRSMMKI QSGFFSLMYS 51 KETGCPCPSL RKDSSTGGRP MSPCIQLANR
DCVPKADTLL PVTDSTSPRP 101 LPLAASRVWA NSASICAFNS AARASLPKIR
AKVSICFSPL VRILPLSTVR 151 SMVVAFFANC SYASAPGPPV MTS* m042-1/g042
95.4% identity in 173 aa overlap 10 20 30 40 50 60 m042-1.pep
MTMICLRFQAFVPRTSALSNTSTAAGPSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL
|||||||||||||:||||||||||||||||||||||||||| |||||||||||||||||| g042
MTMICLRFQAFVPHTSALSNTSTAAGPSCPMAAVRSMMKIQPGFFSLMYSKETGCPCPSL 10 20
30 40 50 60 70 80 90 100 110 120 m042-1.pep
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| g042
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRFWANSASICAFNS 70 80
90 100 110 120 130 140 150 160 170 m042-1.pep
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSX |:||||||||
:|||||||||||||||||:||||||||||||||||||||||: g042
ATRASLPKIRDRVSICFSPLVRILPLSTVKSMVVAFFANCSYASAPGPPVMTNCGLWRCR 130
140 150 160 170 180 g042 DSQSGSNSVPTVAALSNAGCKX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 173>:
TABLE-US-00324 a042-1.seq 1 ATGACGATGA TTTGCTTGCG CTTCCAAGCG
TTCGTGCCGC GTACCAGCGC 51 GTTATCCAAT ACTTCGACAG CCGCCGGCCC
TTCCTGCCCG ATGGCGGCGG 101 TACGGTCGAT GATGAAAATC CAATCGGGGT
TTTTCTCTTT GATGTATTCG 151 AAGGAAACAG GCTGCCCGTG CCCCTCGTTG
CGTAAAGATT CGTCTACAGG 201 CGGTAGGCCG ATGTCGCCGT GTATCCAACT
TGCCAACCGC GACTGCGTGC 251 CGAAGGCGGA CACCTTGTTG CCCGTAACCG
ACAGCACCAG CCCGCGTCCT 301 TTGCCTTTGG CGGCTTCGCG CGTTTGGGCG
AACAGCGCGT CAATCTGCGC 351 CTTCAATTCC GCCGCGCGCG CTTCCTTGCC
GAAAATCCGC GCCAAGGTCT 401 CCATCTGCTT TTCGCCGCTG GTGCGGATAT
TGCCGTTGTC CACCGTCAGA 451 TCTATGGTGG TCGCGTTTTT CGCCAACTGT
TCATACGCTT CCGCGCCCGG 501 CCCGCCGGTA A
This corresponds to the amino acid sequence <SEQ ID 174; ORF
042-1.a>:
TABLE-US-00325 a042-1.pep 1 MTMICLRFQA FVPRTSALSN TSTAAGPSCP
MAAVRSMMKI QSGFFSLMYS 51 KETGCPCPSL RKDSSTGGRP MSPCIQLANR
DCVPKADTLL PVTDSTSPRP 101 LPLAASRVWA NSASICAFNS AARASLPKIR
AKVSICFSPL VRILPLSTVR 151 SMVVAFFANC SYASAPGPPV MTS* m042-1/a042-1
100.0% identity in 173 aa overlap 10 20 30 40 50 60 m042-1.pep
MTMICLRFQAFVPRTSALSNTSTAAGPSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a042-1
MTMICLRFQAFVPRTSALSNTSTAAGPSCPMAAVRSMMKIQSGFFSLMYSKETGCPCPSL 10 20
30 40 50 60 70 80 90 100 110 120 m042-1.pep
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a042-1
RKDSSTGGRPMSPCIQLANRDCVPKADTLLPVTDSTSPRPLPLAASRVWANSASICAFNS 70 80
90 100 110 120 130 140 150 160 170 m042-1.pep
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a042-1
AARASLPKIRAKVSICFSPLVRILPLSTVRSMVVAFFANCSYASAPGPPVMTSX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 175>:
TABLE-US-00326 g043.seq 1 ATGGTTGTTT CAAATCAAAA TATCTATGCC
GTCGGCCCAT CAGCACTTTT 51 TCACATCCGA AGGCAAAAAT CCGTAATGCC
GCCTGAACGC TTCgttgaAC 101 CGTCCCGCGT ggcggtagcc gcAAAAGTGC
ATcGCGGCTT GGATGGTGCT 151 GCCCGATTCG ATGAGGGcga gcGCGTGTTC
CAGCCGCAGG CGGCGCAGGC 201 GTCCGGCGAC GGTTTCGCCG GTTTGCGCTT
TGAAATAGCG TTTCAGGTAG 251 CATTCGTTCA GCCCGACGCG GCGGGCGATT
TCGGCGATGG TCAGCGGGCG 301 GGCGAATTCG CTGTTCAAAA TATCGGCGGC
TTCGTCTATG CGCCGGCGGC 351 GGTAGCCGTT GTCGTGGCGG CGGAAGGTGA
AGCGTAA
This corresponds to the amino acid sequence <SEQ ID 176; ORF
043.ng>:
TABLE-US-00327 g043.pep 1 MVVSNQNIYA VGPSALFHIR RQKSVMPPER
FVEPSRVAVA AKVHRGLDGA 51 ARFDEGERVF QPQAAQASGD GFAGLRFEIA
FQVAFVQPDA AGDFGDGQRA 101 GEFAVQNIGG FVYAPAAVAV VVAAEGEA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 177>:
TABLE-US-00328 m043.seq 1 ATGGTTGTTT CAAATCAAAA TATCTATGCC
GCCGGCCCCT CAGCACTTCT 51 TCACATCCGA AGGCAAAAAT CCGTAATGCC
GTCTGAACGC TTCGTTGAAC 101 CGTCCCGCGT GGCGGTAGCC GCAAAAGTGC
ATGGCGGCTT GGACGGTGCT 151 GCCGGATTCG ATGAGGGCGA GCGCGTGTTC
CAGCCGCAGG CGGCGCAgGC 201 ATCCGGCGAC GGTTTCGCCG GTTTGCGCTT
TGAAATAGCG TTTCAGGTAG 251 CATTCGTTCA GTCCGACGCG GCGGGCGATT
TCGGCGATGG TCAGCGGACG 301 GGCGAATTCG TGTTGCAGGA TGTCGGCGGC
TTCGTCTATG CGCCGACGGC 351 GGTAACCGTT GTCGTGGCGG CGGAAGGTGA
AGCGCAATAA
This corresponds to the amino acid sequence <SEQ ID 178; ORF
043>:
TABLE-US-00329 m043.pep 1 MVVSNQNIYA AGPSALLHIR RQKSVMPSER
FVEPSRVAVA AKVHGGLDGA 51 AGFDEGERVF QPQAAQASGD GFAGLRFEIA
FQVAFVQSDA AGDFGDGQRT 101 GEFVLQDVGG FVYAPTAVTV VVAAEGEAQ*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 043 shows 89.8% identity over a 128 aa overlap with a
predicted ORF (ORF043.a) from N. gonorrhoeae:
TABLE-US-00330 m043/g043 10 20 30 40 50 60 m043.pep
MVVSNQNIYAAGPSALLHIRRQKSVMPSERFVEPSRVAVAAKVHGGLDGAAGFDEGERVF
||||||||||:|||||:|||||||||| |||||||||||||||| |||||| |||||||| g043
MVVSNQNIYAVGPSALFHIRRQKSVMPPERFVEPSRVAVAAKVHRGLDGAARFDEGERVF 10 20
30 40 50 60 70 80 90 100 110 120 m043.pep
QPQAAQASGDGFAGLRFEIAFQVAFVQSDAAGDFGDGQRTGEFVLQDVGGFVYAPTAVTV
||||||||||||||||||||||||||| |||||||||||:|||::|::|||||||:||:| g043
QPQAAQASGDGFAGLRFEIAFQVAFVQPDAAGDFGDGQRAGEFAVQNIGGFVYAPAAVAV 70 80
90 100 110 120 130 m043.pep VVAAEGEAQX |||||||| g043 VVAAEGEAXX
130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 179>:
TABLE-US-00331 a043.seq 1 ATGGTTGTTT CAAATCAAAA TATCTATGCC
GCCGGCCCCT CAGCACTTCT 51 TCACATCCGA AGGCAAAAAT CCGTAATGCC
GTCTGAACGC TTCGTTGAAC 101 CGTCCCGCGT GGCGGTAGCC GCAAAAGTGC
ATGGCGGCTT GGACGGTGCT 151 GCCGGATTCG ATGAGGGCGA GCGCGTGTTC
CAGCCGCAGG CGGCGCAGGC 201 ATCCGGCGAC GGTTTCGCCG GTTTGCGCTT
TGAAATAGCG TTTCAGGTAG 251 CATTCGTTCA GTCCGACGCG GCGGGCGATT
TCGGCGATGG TCAGCGGACG 301 GGCGAATTCG TGTTGCAGGA TGTCGGCGGC
TTCGTCTATG CGCCGACGGC 351 GGTAACCGTT GTCGTGGCGG CGGAAGGTGA
AGCGCAATAA
This corresponds to the amino acid sequence <SEQ ID 180; ORF
043.a>:
TABLE-US-00332 a043.pep 1 MVVSNQNIYA AGPSALLHIR RQKSVMPSER
FVEPSRVAVA AKVHGGLDGA 51 AGFDEGERVF QPQAAQASGD GFAGLRFEIA
FQVAFVQSDA AGDFGDGQRT 101 GEFVLQDVGG FVYAPTAVTV VVAAEGEAQ*
m043/a043 100.0% identity in 129 aa overlap 10 20 30 40 50 60
m043.pep
MVVSNQNIYAAGPSALLHIRRQKSVMPSERFVEPSRVAVAAKVHGGLDGAAGFDEGERVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a043
MVVSNQNIYAAGPSALLHIRRQKSVMPSERFVEPSRVAVAAKVHGGLDGAAGFDEGERVF 10 20
30 40 50 60 70 80 90 100 110 120 m043.pep
QPQAAQASGDGFAGLRFEIAFQVAFVQSDAAGDFGDGQRTGEFVLQDVGGFVYAPTAVTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a043
QPQAAQASGDGFAGLRFEIAFQVAFVQSDAAGDFGDGQRTGEFVLQDVGGFVYAPTAVTV 70 80
90 100 110 120 130 m043.pep VVAAEGEAQX |||||||||| a043 VVAAEGEAQX
130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 181>:
TABLE-US-00333 g044.seq 1 ATGCTGCCCG ACCAGAGCGT CGAGTTCTTG
CCACAAGTCG TCGTTTTTGA 51 CGGGCTGTTT GGCGGCGGTT TTCCAGCCGT
TGCGCTTCCA ACCGTGTATC 101 CAGTTTTCCA TGCCGTTTTT GACGTATTGC
GAGTCGGTGC AGATGATGAC 151 GGTGCAGCGG CGTTTGAGCG ATTTCAGCCC
TTCGATAACG GCGGTCAGCT 201 CCATGCGGTT GTTGGTGGTT TGCGCTTCGC
CGCCGAAAAG TTCTTTTTCG 251 CGGCTGCCGT AGCGCATTAA
This corresponds to the amino acid sequence <SEQ ID 182; ORF
044.ng>:
TABLE-US-00334 g044.pep 1 MLPDQSVEFL PQVVVFDGLF GGGFPAVALP
TVYPVFHAVF DVLRVGADDD 51 GAAAFERFQP FDNGGQLHAV VGGLRFAAEK
FFFAAAVAH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 183>:
TABLE-US-00335 m044.seq 1 ATGCCGTCCG ACTAGAGCGT CGAGTTCTTT
CCAGAAGTCG TCGTTTTTGA 51 CGGGCTGTTT GGAGGCGGTT TTCCAGCCGT
TGCGCTTCCA ACCGTGTATC 101 CAGTTTTCCA TGCCATTTTT GACGTATTGC
GAGTCGGTGC AGATGATGAC 151 GGTGCAGCGG CGTTTGAGCG ATTTCAGTCC
TTCGATGACG GCAGTCAGTT 201 CCATGCGGTT GTTGGTGGTT TGCGCTTCGC
CGCCGAAAAG TTCTTTTTCG 251 TGGCTACCGT AGCGCAyTAa
This corresponds to the amino acid sequence <SEQ ID 184; ORF
044>:
TABLE-US-00336 m044.pep 1 MPSDXSVEFF PEVVVFDGLF GGGFPAVALP
TVYPVFHAIF DVLRVGADDD 51 GAAAFERFQS FDDGSQFHAV VGGLRFAAEK
FFFVATVAH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 185>:
TABLE-US-00337 a044.seq 1 GTGCCGTCCG ACCAGCGCGT CGAGTTCTTT
CCACAAGTCG TCGTTTTTGA 51 CGGGCTGTTT GGCGGCGGTT TTCCAGCCGT
TGCGCTTCCA ACCGTGTATC 101 CAGTTTTCCA TGCCGTTTTT GACGTATTGC
GAGTCGGTGC AGATGATGAC 151 GGTGCAGCGG CGTTTGAGCG ATTTCAGTCC
TTCGATGACG GCGGTCAGTT 201 CCATACGGTT GTTGGTGGTT TGCGCTTCGC
CGCCGAAAAG TTCTTTTTCG 251 TGGCTGCCGT AGCGCATTAA
This corresponds to the amino acid sequence <SEQ ID 186; ORF
044.a>:
TABLE-US-00338 a044.pep 1 VPSDQRVEFF PQVVVFDGLF GGGFPAVALP
TVYPVFHAVF DVLRVGADDD 51 GAAAFERFQS FDDGGQFHTV VGGLRFAAEK
FFFVAAVAH* m044/a044 91.0% identity over a 89 aa overlap 10 20 30
40 50 60 m044.pep
MPSDXSVEFFPEVVVFDGLFGGGFPAVALPTVYPVFHAIFDVLRVGADDDGAAAFERFQS :|||
|||||:||||||||||||||||||||||||||:||||||||||||||||||||| a044
VPSDQRVEFFPQVVVFDGLFGGGFPAVALPTVYPVFHAVFDVLRVGADDDGAAAFERFQS 10 20
30 40 50 60 70 80 90 m044.pep FDDGSQFHAVVGGLRFAAEKFFFVATVAHX
||||:|||:||||||||||||||||:|||| a044 FDDGGQFHTVVGGLRFAAEKFFFVAAVAHX
70 80 90
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 044
shows 86.5% identity over a 89 aa overlap with a predicted ORF (ORF
044.ng) from N. gonorrhoeae:
TABLE-US-00339 m044/g044 10 20 30 40 50 60 m044.pep
MPSDXSVEFFPEVVVFDGLFGGGFPAVALPTVYPVFHAIFDVLRVGADDDGAAAFERFQS | |
||||:|:||||||||||||||||||||||||||:|||||||||||||||||||| g044
MLPDQSVEFLPQVVVFDGLFGGGFPAVALPTVYPVFHAVFDVLRVGADDDGAAAFERFQP 10 20
30 40 50 60 70 80 90 m044.pep FDDGSQFHAVVGGLRFAAEKFFFVATVAHX
||:|:|:||||||||||||||||:|:|||| g044 FDNGGQLHAVVGGLRFAAEKFFFAAAVAHX
70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 187>:
TABLE-US-00340 g046.seq 1 ATGTCGGCAA TGCTGCGTCC GACAAGCAGC
CCGCCGCgcc gCGCCTGTAT 51 GATGACCATC CGCACGCGGT CGTCTGCAAA
ACGTAAAACC TGCAATGCGC 101 CCGGGCAGTC TATCAGGCCG GCAAGCTGTT
CGGTAACGAG CTGTTCGGGG 151 CTGATGGTTT CGGTTATGCC gaATATGGAA
AGGCTGCCGt TTTcGTTGTT 201 TTCGAGCTTG GGGCTGAGGT ATTCGAGGTA
TtcgctGGAA CGGACGCGCG 251 CGATGCGGCC GGGGATGTTG AACAGGTCGG
CGGCAACTTT GCAGGCGACG 301 ATGTTGGTTT CGTCGCTGCG GGagaGCGCG
AGcagcaagt cggcatcttC 351 CgcgccggcG Cgttataatg tgAAGGGGGA
TGCGccgttg ccgaAAACGG 401 TTTGGacatc gaggcggctg CCTGTTTCCT
GCAATGCTTT TTCGTCGATG 451 TCGATAAcgg TTACGTCGTT GTTGGTGATG
GCGGCAAGGT TTTGCGCGAC 501 GGTAGAACCT ACCTGCCCGT TGCCTAAAAT
GAGGATTTTC ACGGTATGGG 551 TCGCCGGGTG A
This corresponds to the amino acid sequence <SEQ ID 188; ORF
046.ng>:
TABLE-US-00341 g046.pep 1 MSAMLRPTSS PPRRACMMTI RTRSSAKRKT
CNAPGQSIRP ASCSVTSCSG 51 LMVSVMPNME RLPFSLFSSL GLRYSRYSLE
RTRAMRPGML NRSAATLQAT 101 MLVSSLRESA SSKSASSAPA RYNVKGDAPL
PKTVWTSRRL PVSCNAFSSM 151 SITVTSLLVM AARFCATVEP TCPLPKMRIF
TVWVAG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 189>:
TABLE-US-00342 m046.seq 1 ATGTCGGCAA TGCTGCGTCC GACAAGCAsT
CCGC.r.sGC gCGcCTGTAT 51 GATGACCATC CGCACGCGGT CGTCTGCAAA
ACGTAAAACC TGCAATGCGC 101 CCGGGCAGTC TATCAGGCCG GCAAGCTGTT
CGGTAACGAG CTGTTCGGGG 151 CTGATGGTTT CGGTTATGCC GAATATGGAA
AGGCTGCCGT TTTCGTTGTT 201 TTCGAGCTTG GGGCTGAGGT ATTCGAGGTA
TTCGCTGGAA CGGACGCGCG 251 CGATGCGGCC GGGGATGTTG AACAGGTCGG
CGGCAACTTT GCAGGCGACG 301 ATGTTGGTTT CGTCGCTGCG GGAGAGCGCG
AGCAGCAAGT CGGCATCTTC 351 CGCGCCGGCG CGTTCTAATG TGAAGGGGGA
TGCGCCGTTG CCGAAAACGG 401 TTTGGACATC GAGGCGGCTG CCTGTTTCCT
GCAATGCTTT TTCGTCGATG 451 TCGATAACGG TTACGTCGTT GTTGGGTATG
GCGGCAAGGT TTTGTGCGAC 501 GGTAGAACCT ACCTGTCCGT TGCCTAAAAT
GAGGATTTTC ACGGTGTGGG 551 TCGCCGAGTG A
This corresponds to the amino acid sequence <SEQ ID 190; ORF
046>:
TABLE-US-00343 m046.pep 1 MSAMLRPTSX PXXRACMMTI RTRSSAKRKT
CNAPGQSIRP ASCSVTSCSG 51 LMVSVMPNME RLPFSLFSSL GLRYSRYSLE
RTRAMRPGML NRSAATLQAT 101 MLVSSLRESA SSKSASSAPA RSNVKGDAPL
PKTVWTSRRL PVSCNAFSSM 151 SITVTSLLGM AARFCATVEP TCPLPKMRIF
TVWVAE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 191>:
TABLE-US-00344 a046.seq 1 ATGTCGGCAA TGCTGCGTCC GACAAGCAGT
CCGCCGCGCC GCGCCTGTAT 51 GATGACCATC CGCACGCGGT CGTCTGCAAA
ACGTAAAACC TGCAATGCGC 101 CCGGGCAGTC TATCAGGCCG GCAAGCTGTT
CGGTAACGAG CTGTTCGGGG 151 CTGATGGTTT CGGTTATGCC GAATATGGAA
AGGCTGCCGT TTTCGTTGTT 201 TTCGAGCTTG GGGCTGAGGT ATTCGAGGTA
TTCGCTGGAA CGGACGCGCG 251 CGATGCGGCC GGGGATGTTG AACAGGTCGG
CGGCAACTTT GCAGGCGACG 301 ATGTTGGTTT CGTCGCTGCG GGAGAGCGCG
AGCAGCAAGT CGGCATCTTC 351 CGCGCCGGCG CGTTCTAATG TGAAGGGGGA
TGCGCCGTTG CCGAAAACGG 401 TTTGGACATC GAGGCGGCTG CCTGTTTCCT
GCAATGCTTT TTCGTCGATG 451 TCGATAACGG TTACGTCGTT GTTGGGTATG
GCGGCAAGGT TTTGTGCGAC 501 GGTAGAACCT ACCTGTCCGT TGCCTAAAAT
GAGGATTTTC ACGGTGTGGG 551 TCGCCGAGTG A
This corresponds to the amino acid sequence <SEQ ID 192; ORF
046.a>:
TABLE-US-00345 a046.pep 1 MSAMLRPTSS PPRRACMMTI RTRSSAKRKT
CNAPGQSIRP ASCSVTSCSG 51 LMVSVMPNME RLPFSLFSSL GLRYSRYSLE
RTRAMRPGML NRSAATLQAT 101 MLVSSLRESA SSKSASSAPA RSNVKGDAPL
PKTVWTSRRL PVSCNAFSSM 151 SITVTSLLGM AARFCATVEP TCPLPKMRIF TVWVAE*
m046/a046 98.4% identity over a 186 aa overlap 10 20 30 40 50 60
m046.pep
MSAMLRPTSXPXXRACMMTIRTRSSAKRKTCNAPGQSIRPASCSVTSCSGLMVSVMPNME
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| a046
MSAMLRPTSSPPRRACMMTIRTRSSAKRKTCNAPGQSIRPASCSVTSCSGLMVSVMPNME 10 20
30 40 50 60 70 80 90 100 110 120 m046.pep
RLPFSLFSSLGLRYSRYSLERTRAMRPGMLNRSAATLQATMLVSSLRESASSKSASSAPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a046
RLPFSLFSSLGLRYSRYSLERTRAMRPGMLNRSAATLQATMLVSSLRESASSKSASSAPA 70 80
90 100 110 120 130 140 150 160 170 180 m046.pep
RSNVKGDAPLPKTVWTSRRLPVSCNAFSSMSITVTSLLGMAARFCATVEPTCPLPKMRIF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a046
RSNVKGDAPLPKTVWTSRRLPVSCNAFSSMSITVTSLLGMAARFCATVEPTCPLPKMRIF 130
140 150 160 170 180 m046.pep TVWVAEX ||||||| a046 TVWVAEX
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 046
shows 97.3% identity over a 185 aa overlap with a predicted ORF
(ORF 046.ng) from N. gonorrhoeae:
TABLE-US-00346 m046/g046 10 20 30 40 50 60 m046.pep
MSAMLRPTSXPXXRACMMTIRTRSSAKRKTCNAPGQSIRPASCSVTSCSGLMVSVMPNME
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| g046
MSAMLRPTSSPPRRACMMTIRTRSSAKRKTCNAPGQSIRPASCSVTSCSGLMVSVMPNME 10 20
30 40 50 60 70 80 90 100 110 120 m046.pep
RLPFSLFSSLGLRYSRYSLERTRAMRPGMLNRSAATLQATMLVSSLRESASSKSASSAPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g046
RLPFSLFSSLGLRYSRYSLERTRAMRPGMLNRSAATLQATMLVSSLRESASSKSASSAPA 70 80
90 100 110 120 130 140 150 160 170 180 m046.pep
RSNVKGDAPLPKTVWTSRRLPVSCNAFSSMSITVTSLLGMAARFCATVEPTCPLPKMRIF |
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| g046
RYNVKGDAPLPKTVWTSRRLPVSCNAFSSMSITVTSLLVMAARFCATVEPTCPLPKMRIF 130
140 150 160 170 180 m046.pep TVWVAEX ||||| g046 TVWVAGX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 193>:
TABLE-US-00347 g047.seq 1 ATGGTCATCA TACAGGCGcg gcGCGGCGGG
CTGCTTGTCG GACGCAGCAT 51 TGCCGACATC GCCCAAGATT TGCCCGACGG
GGCCGACTGC CAAATCTGCG 101 CCGTTTACCG CAACAACCGC CTCATCGTCC
CCGCGCCGCA AACCGTCATC 151 ATCGAAGGCG ACGAAATCCT GTTTGCCGCC
GCCGCCGAAA ACATCGGGGC 201 GGTCATACCc gaATTGCGCC CCAAAGAAAC
CAGCACCCGC CGCATCATGA 251 TTGCCGGCGG CGGCAACATc tgctACCGCC
TCGCCAAGCA GCTCGAACAC 301 GCATAcaacG TCAAAATCAT CGAATGCCGG
CCGCGCcgtg ccgaATGGAT 351 AGCCGAAAAC ctcgAcaaCA CCCTCGTCCT
GCAAGGTTCG Gcaaccgacg 401 aAaccctgct cgAcaacgaa tacatcgacg
aaatcgaCGT ATTCTGCGCC 451 CTGACCAACG ACGACGAAAG CAACATTAtg
tCCGCCCTTT TGGCGAAAAA 501 CCTcggcgCG AAGCgcgtca tcggCATCGT
CAACCGCTCA AGCTACGTCG 551 ATTTGCTCGA AGGCAACAAA ATCGACATCG
TCGTCTCCCC CCACCTCATC 601 ACCATCGGCT CGATACTCGC CCACATCCGG
CGCGGCGACA TCGTTGCCGT 651 CCACCCCATC CGGCGCGGCA CGGCGGAAGC
CATCGAAGTC GTCGCGCACG 701 GCGACAAAAA AACTTCCGCC ATCATCGGCA
GGCGCATCAG CGGCATCAAA 751 TGGCCCGAAG GCTGCCACAT TGCCGCCGTC
GTCCGCGCCG GAACCGGCGA 801 AACCATTATG GGACACCATA CCGAAACCGT
CATCCAAGAC GGTGACCACA 851 TCATCTTTTT CGTCTCGCGC CGGCGCATCC
TGAACGAACT GGAGAAACTC 901 ATCCAAGTCA AAATGGGCTT TTTCGGATAA
This corresponds to the amino acid sequence <SEQ ID 194; ORF
047.ng>:
TABLE-US-00348 g047.pep 1 MVIIQARRGG LLVGRSIADI AQDLPDGADC
QICAVYRNNR LIVPAPQTVI 51 IEGDEILFAA AAENIGAVIP ELRPKETSTR
RIMIAGGGNI CYRLAKQLEH 101 AYNVKIIECR PRRAEWIAEN LDNTLVLQGS
ATDETLLDNE YIDEIDVFCA 151 LTNDDESNIM SALLAKNLGA KRVIGIVNRS
SYVDLLEGNK IDIVVSPHLI 201 TIGSILAHIR RGDIVAVHPI RRGTAEAIEV
VAHGDKKTSA IIGRRISGIK 251 WPEGCHIAAV VRAGTGETIM GHHTETVIQD
GDHIIFFVSR RRILNELEKL 301 IQVKMGFFG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 195>:
TABLE-US-00349 m047.seq 1 ATGGTCATCA TACAGgCGcG C..syGCGGA
sTGCTTGTCG GACGCAGCAT 51 TGCCGACATC GCCCAAGATT TGCCCGACGG
GGCCGACTGC CAAATCTGCG 101 CCGTTTACCG CAACAACCGC CTCATCGTCC
CCGCGCCGCA AACCGTCATC 151 ATCGAAGGCG ACGAAATCCT ATTTGCCGCC
GCCGCCGAAA ACATCGGCGC 201 GGTCATACCC GAATTGCGCC CCAAAGAAAC
CCAAAGAAAC CAGCcCmgmm 251 GcATCATGAT TkCCGGCGGC GGCAACATCG
GCTACCGTCT CGCCAAGCAG 301 CTCGAACACG CATACAACGT yAAAATCATC
GAATGCCGGC CGCGCCGTGC 351 CGAATGGATA GCCGAAAACC TCGACAACAC
CCTCGTCyTG CAAGGTTCGG 401 CAACCGACGA AACCCTGCTC GACAACGAAT
ACATCGACGA AATCGACGTA 451 TTCTGCGCCC TGACCAACGA CGACGAAAGC
AACATTATGT CCGCCCTTTT 501 GGCGAaAAAC CTCGGCGCGA AGCGCGTCAT
CGGCATCGTC AACCGCTCAA 551 GCTACGTCGA TTTGCTCGAA GGCAACAAAA
TCGACATCGT CGTCTCCCCC 601 CACCTCATCA CCATCGGCTC GATACTCGCC
CACATCCGGC GCGGCGACAT 651 CGTTGCCGTC CACCCCATCC GGCGCGGCAC
GGCGGAAGCC ATCGAAGTCG 701 TCGCACACGG CGACAAAAAA ACTTCCGCCA
TCATCGGCAG GCGCATCAGC 751 GGCATCAAAT GGCCCGAAGG CTGCCACATT
GCCGCCGTCG TCCGCGCCGG 801 AACCGGCGAA ACCATTATGG GACACCATAC
CGAAACCGTC ATCCAAGACG 851 GCGACCACAT CATCTTTTTC GTCTCGCGCC
GGCGCATCCT GAACGAACTG 901 GAAAAACTCA TCCAGGTCAA AATGGGCTTT
TTCGGATAA
This corresponds to the amino acid sequence <SEQ ID 196; ORF
047>:
TABLE-US-00350 m047.pep 1 MVIIQARXXG XLVGRSIADI AQDLPDGADC
QICAVYRNNR LIVPAPQTVI 51 IEGDEILFAA AAENIGAVIP ELRPKETQRN
QPXXIMIXGG GNIGYRLAKQ 101 LEHAYNVKII ECRPRRAEWI AENLDNTLVL
QGSATDETLL DNEYIDEIDV 151 FCALTNDDES NIMSALLAKN LGAKRVIGIV
NRSSYVDLLE GNKIDIVVSP 201 HLITIGSILA HIRRGDIVAV HPIRRGTAEA
IEVVAHGDKK TSAIIGRRIS 251 GIKWPEGCHI AAVVRAGTGE TIMGHHTETV
IQDGDHIIFF VSRRRILNEL 301 EKLIQVKMGF FG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 197>:
TABLE-US-00351 a047.seq 1 ATGGTCATCA TACAGGCGCG GCGCGGCGGA
CTGCTTGTCG GACGCAGCAT 51 TGCCGACATC GCCCAAGATT TGCCCGACGG
GGCCGACTGC CAAATCTGCG 101 CCGTTTACCG CAACAACCGC CTCATCGTCC
CCGCGCCGCA AACCGTCATC 151 ATCGAAGGCG ACGAAATCCT ATTTGCCGCC
GCCGCCGAAA ACATCGGCGC 201 GGTCATACCC GAATTGCGCC CCAAAGAAAC
CAGCACCCGC CGCATCATGA 251 TTGCCGGCGG CGGCAACATC GGCTACCGTC
TCGCCAAGCA GCTCGAACAC 301 GCATACAACG TCAAAATCAT CGAATGCCGG
CCGCGCCGTG CCGAATGGAT 351 AGCCGAAAAC CTCGACAACA CCCTCGTCCT
GCAAGGTTCG GCAACCGACG 401 AAACCCTGCT CGACAACGAA TACATCGACG
AAATCGACGT ATTCTGCGCC 451 CTGACCAACG ACGACGAAAG CAACATTATG
TCCGCCCTTT TGGCGAAAAA 501 CCTCGGCGCG AAGCGCGTCA TCGGCATCGT
CAACCGCTCA AGCTACGTCG 551 ATTTGCTCGA AGGCAACAAA ATCGACATCG
TCGTCTCCCC CCACCTCATC 601 ACCATCGGCT CGATACTCGC CCACATCCGG
CGCGGCGACA TCGTTGCCGT 651 CCACCCCATC CGGCGCGGCA CGGCGGAAGC
CATCGAAGTC GTCGCACACG 701 GCGACAAAAA AACTTCCGCC ATCATCGGCA
GGCGCATCAG CGGCATCAAA 751 TGGCCCGAAG GCTGCCACAT TGCCGCCGTC
GTCCGCGCCG GAACCGGCGA 801 AACCATTATG GGACACCATA CCGAAACCGT
CATCCAAGAC GGCGACCACA 851 TCATCTTTTT CGTCTCGCGC CGGCGCATCC
TGAACGAACT GGAAAAACTC 901 ATCCAAGTCA AAATGGGCTT TTTCGGATAA
This corresponds to the amino acid sequence <SEQ ID 198; ORF
047.a>:
TABLE-US-00352 a047.pep 1 MVIIQARRGG LLVGRSIADI AQDLPDGADC
QICAVYRNNR LIVPAPQTVI 51 IEGDEILFAA AAENIGAVIP ELRPKETSTR
RIMIAGGGNI GYRLAKQLEH 101 AYNVKIIECR PRRAEWIAEN LDNTLVLQGS
ATDETLLDNE YIDEIDVFCA 151 LTNDDESNIM SALLAKNLGA KRVIGIVNRS
SYVDLLEGNK IDIVVSPHLI 201 TIGSILAHIR RGDIVAVHPI RRGTAEAIEV
VAHGDKKTSA IIGRRISGIK 251 WPEGCHIAAV VRAGTGETIM GHHTETVIQD
GDHIIFFVSR RRILNELEKL 301 IQVKMGFFG* m047/a047 96.5% identity over
a 312 aa overlap 10 20 30 40 50 60 m047.pep
MVIIQARXXGXLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEILFAA
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| a047
MVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEILFAA 10 20
30 40 50 60 70 80 90 100 110 120 m047.pep
AAENIGAVIPELRPKETQRNQPXXIMIXGGGNIGYRLAKQLEHAYNVKIIECRPRRAEWI
|||||||||||||||||: : ||| |||||||||||||||||||||||||||||||| a047
AAENIGAVIPELRPKETSTRR---IMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAEWI 70 80
90 100 110 130 140 150 160 170 180 m047.pep
AENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRVIGIV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a047
AENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRVIGIV 120
130 140 150 160 170 190 200 210 220 230 240 m047.pep
NRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVVAHGDKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a047
NRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVVAHGDKK 180
190 200 210 220 230 250 260 270 280 290 300 m047.pep
TSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVSRRRILNEL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a047
TSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVSRRRILNEL 240
250 260 270 280 290 310 m047.pep EKLIQVKMGFFGX ||||||||||||| a047
EKLIQVKMGFFGX 300 310
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 047
shows 96.2% identity over a 312 aa overlap with a predicted ORF
(ORF 047.ng) from N. gonorrhoeae:
TABLE-US-00353 m047/g045 m047.pep
MVIIQARXXGXLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEILFAA 60
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| g047
MVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEILFAA 60
m047.pep
AAENIGAVIPELRPKETQRNQPXXIMIXGGGNIGYRLAKQLEHAYNVKIIECRPRRAEWI 120
|||||||||||||||||: : ||| ||||| |||||||||||||||||||||||||| g047
AAENIGAVIPELRPKETSTRR---IMIAGGGNICYRLAKQLEHAYNVKIIECRPRRAEWI 117
m047.pep
AENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRVIGIV 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g047
AENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRVIGIV 177
m047.pep
NRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVVAHGDKK 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g047
NRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVVAHGDKK 237
m047.pep
TSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVSRRRILNEL 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g047
TSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVSRRRILNEL 297
m047.pep EKLIQVKMGFFGX 313 ||||||||||||| g047 EKLIQVKMGFFGX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 199>:
TABLE-US-00354 g048.seq 1 ATGCTCGACA AAGGCGAGGA GTTGCCCGTC
GATTTCACCA ACCGCCTGAT 51 TTACTACGTc ggcCCcgTCG ATCCGGTCGG
CGATGAAGTC GTCGGTCCCG 101 CAGGTCCGAC CACAGCCACC CGCATGGACA
AATTTACCCG CCAAATGCTC 151 AAACAAACCG GCCTCTTGGG CATGATCGGC
AAATCCGagc gcgGcgcggc 201 cacctGCGAA GCcatCGCCG ACAACAAGGC
CGTGTACCTC ATGGCAGTCG 251 GCGGCGCGGC ATACCTCGTG GCAAAAGCCA
TCAAATCTTC CAAAGTCTTG 301 GCGTTCCCCG AATTGGGTAT GGAAGCCGTT
TACGAATTTG AAGTCAAAGA 351 TATGCCCGTA ACCGTCGCCG TGGACAGCAA
AGGCGAATCC ATCCACGCCA 401 CCGCCCCGCG CAAATGGCAG GCGAAAATCG
GCATCATCCC CGTCGAGTCT 451 TGA
This corresponds to the amino acid sequence <SEQ ID 200; ORF
048.ng>:
TABLE-US-00355 g048.pep 1 MLDKGEELPV DFTNRLIYYV GPVDPVGDEV
VGPAGPTTAT RMDKFTRQML 51 KQTGLLGMIG KSERGAATCE AIADNKAVYL
MAVGGAAYLV AKAIKSSKVL 101 AFPELGMEAV YEFEVKDMPV TVAVDSKGES
IHATAPRKWQ AKIGIIPVES 151 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 201>:
TABLE-US-00356 m048.seq 1 ATGCTCAACA AAGGCGAAGA ATTGCCCGTC
GATTTCACCA ACCGCCTGAT 51 TTACTACGTC GGCCCCGTCG ATCCGGTCGG
CGATGAAGTC GTCGGTCCGG 101 CAGGTCCGAC CACAGCCACC CGCATGGACA
AATTCACCCG CCAAATGCTC 151 GAACAAACCG ACCTCTTGGG CATGATCGGC
AAATCCGAGC GCGGCGTGGC 201 CACCTGCGAA GCCATCGCCG ACAACAAAGC
CGTGTACCTC ATGGCAGTCG 251 GCGGCGCGGC GTATCTCGTG GCAAAAGCCA
TCAAATCTTC CAAAGTCTTG 301 GCGTTCCCCG AATTGGGCAT GGAAGCCATT
TACGAATTTG AAGTCAAAGA 351 CATGCCCGTA ACCGTCGCCG TAGATAGCAA
AGGCGAATCC ATCCACGCCA 401 CCGCCCCGCG CAAATGGCAG GCGAAAATCG
GCATCATCCC CGTCGAATCT 451 TGA
This corresponds to the amino acid sequence <SEQ ID 202; ORF
048>:
TABLE-US-00357 m048.pep 1 MLNKGEELPV DFTNRLIYYV GPVDPVGDEV
VGPAGPTTAT RMDKFTRQML 51 EQTDLLGMIG KSERGVATCE AIADNKAVYL
MAVGGAAYLV AKAIKSSKVL 101 AFPELGMEAI YEFEVKDMPV TVAVDSKGES
IHATAPRKWQ AKIGIIPVES 151 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 203>:
TABLE-US-00358 a048.seq 1 ATGCTCGACA AAGGCGAAGA ATTGCCCGTC
GATTTCACCA ACCGCCTGAT 51 TTACTACGTC GGCCCCGTCG ATCCGGTCGG
CGACGAAATC GTCGGCCCAG 101 CAGGTCCGAC CACCGCCACC CGCATGGACA
AATTCACCCG CCAAATGCTC 151 GAACAAACCG ACCTCTTGGG CATGATCGGC
AAATCCGAGC GCGGCGCGGC 201 CACCTGCGAA GCCATCGCCG ACAACAAAGC
CGTGTACCTC ATGGCAGTCG 251 GCGGCGCGGC GTATCTCGTG GCAAAAGCCA
TCAAATCTTC CAAAGTCTTG 301 GCGTTCCCCG AATTGGGCAT GGAAGCCATT
TACGAATTTG AAGTCAAAGA 351 CATGCCCGTA ACCGTCGCCG TAGACAGCAA
AGGCGAATCC ATCCACGCCA 401 CCGCCCCGCC CCAATGGCAG GCGAAAATCG
GCATCATCCC CGTCAAATCT 451 TGA
This corresponds to the amino acid sequence <SEQ ID 204; ORF
048.a>:
TABLE-US-00359 a048.pep 1 MLDKGEELPV DFTNRLIYYV GPVDPVGDEI
VGPAGPTTAT RMDKFTRQML 51 EQTDLLGMIG KSERGAATCE AIADNKAVYL
MAVGGAAYLV AKAIKSSKVL 101 AFPELGMEAI YEFEVKDMPV TVAVDSKGES
IHATAPPQWQ AKIGIIPVKS 151 * m048/a048 96.0% identity over a 150 aa
overlap 10 20 30 40 50 60 m048.pep
MLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTDLLGMIG
||:||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| a048
MLDKGEELPVDFTNRLIYYVGPVDPVGDEIVGPAGPTTATRMDKFTRQMLEQTDLLGMIG 10 20
30 40 50 60 70 80 90 100 110 120 m048.pep
KSERGVATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPV
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| a048
KSERGAATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPV 70 80
90 100 110 120 130 140 150 m048.pep TVAVDSKGESIHATAPRKWQAKIGIIPVESX
|||||||||||||||| :||||||||||:|| a048
TVAVDSKGESIHATAPPQWQAKIGIIPVKSX 130 140 150
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 048
shows 96.4% identity over a 150 aa overlap with a predicted ORF
(ORF 048.ng) from N. gonorrhoeae:
TABLE-US-00360 m048/g048 10 20 30 40 50 60 m048.pep
MLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTDLLGMIG
||:|||||||||||||||||||||||||||||||||||||||||||||||:|| |||||| g048
MLDKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLKQTGLLGMIG 10 20
30 40 50 60 70 80 90 100 110 120 m048.pep
KSERGVATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPV
|||||:|||||||||||||||||||||||||||||||||||||||||||:|||||||||| g048
KSERGAATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAVYEFEVKDMPV 70 80
90 100 110 120 130 140 150 m048.pep TVAVDSKGESIHATAPRKWQAKIGIIPVESX
||||||||||||||||||||||||||||||| g048
TVAVDSKGESIHATAPRKWQAKIGIIPVESX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 205>:
TABLE-US-00361 g049.seq 1 ATGCGGGCGC AGGCGTTTGA TCAACCGTTC
GGTCAGCTCC TGTTCGGACA 51 GGCAGAACAC TTCGCGCCGG TTGACGGCTT
TCGGGTTCAG GATATTGATT 101 TGGACGGGCA TCAACGCCTC TTCCGCACCG
CCTTCGCCGT TTTCCGCAAC 151 CCCGTCTGCC GCCGTACCGG ATTCTGCCGC
ATCGGCGTTT TCCCCGCCCT 201 CAATCTGTGC GGTTTCAAAT TCGGCACTGT
CTTTTTTGGC ATCGAACCGG 251 ATTCTCCGCC GCGATTCGAT GTGTTTTTCC
GAAAccggca tTTGCAGGGA 301 AGCCTgcgcg TTGAGCCAGT TTTCCTGAAG
GACGATCATC GGGTCGGTTT 351 CGACTTCCTC GCCGCAATCG GCAACGGCgc
tGTTGTGTTC TTCCTGCCAT 401 TTCTTCAGAT ACGCCTTTAA
This corresponds to the amino acid sequence <SEQ ID 206; ORF
049.ng>:
TABLE-US-00362 g049.pep 1 MRAQAFDQPF GQLLFGQAEH FAPVDGFRVQ
DIDLDGHQRL FRTAFAVFRN 51 PVCRRTGFCR IGVFPALNLC GFKFGTVFFG
IEPDSPPRFD VFFRNRHLQG 101 SLRVEPVFLK DDHRVGFDFL AAIGNGAVVF
FLPFLQIRL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 207>:
TABLE-US-00363 m049.seq (partial) 1 ATGCGGGCGC AGGCGTTTGA
TCAGCCGTTC GGTCAGCTCC TGTTCGGACA 51 GGCAGAACAC TTCGCGCCGG
TTGACGGCTT TCGGGTTCAG GATATTGATT 101 TGGACGGGCA TCAACGTTTC
TTCCGCATCG TTTTCCCCGT TTTCCGAAAC 151 CGCCGGCTCA TTCGTGCCGG
ATTCTGCCTC GTCGGCGTTT TCCCCGCTTT 201 CAATCTGTCC GGTTTCAAAT
TCGACACTGT CTTTTTTGGT ATCAAACCGG 251 ATTCTCCGCC GCGATTCGAT
GTGTTTTTCC GAAACCGACA TTTGCAGGGA 301 AGCCTGCGCG TTGAGCCAGT
TTTCCTGAAG GACGATCATC GGGTCGGTTT 351 CGACTTCCTC GCCGCAATCG
GCAACGGCGG CATTGTGTTC CTCCTGCCAT 401 TTTTTCAGAT ACGCCTT...
This corresponds to the amino acid sequence <SEQ ID 208; ORF
049>:
TABLE-US-00364 m049.pep (partial) 1 MRAQAFDQPF GQLLFGQAEH
FAPVDGFRVQ DIDLDGHQRF FRIVFPVFRN 51 RRLIRAGFCL VGVFPAFNLS
GFKFDTVFFG IKPDSPPRFD VFFRNRHLQG 101 SLRVEPVFLK DDHRVGFDFL
AAIGNGGIVF LLPFFQIRL...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 209>:
TABLE-US-00365 a049.seq 1 ATGCGGGCGC AGGCGTTTGA TCAGCCGTTC
GGTCAGCTCC TGTTCGGACA 51 GGCAGAACAC TTCGCGCCGG TTGACGGCTT
TCGGGTTCAG AATATTGATT 101 TGGACGGGCA TCAACGCTTC TTCCGCACCG
CCTTCGCCGT TTTCCGCAAC 151 CCCGTCTGCC GCCGTACCCG ATTCTGCCGC
ATCGGCGTTT TCCCCGCCTT 201 CAATCTGTCC GGTTTCAAAT TCGGCACTGT
CTTTTTTGGC ATCAAACCGG 251 ATTCTCCGCC GCGATTCGAT GTGTTTTTCC
GAAACCGACA TTTGCAGGGA 301 AGCCTGCGCG TTGAGCCAGT TTTCCTGAAG
GACGATCATC GGGTCGGTTT 351 CGACTTCCTC GCCGCAATCG GCAACGGCGG
CATTGTGTTC CTCCTGCCAT 401 TTTTTCAGAT ACGCCTT
This corresponds to the amino acid sequence <SEQ ID 210; ORF
049.a>:
TABLE-US-00366 a049.pep 1 MRAQAFDQPF GQLLFGQAEH FAPVDGFRVQ
NIDLDGHQRF FRTAFAVFRN 51 PVCRRTRFCR IGVFPAFNLS GFKFGTVFFG
IKPDSPPRFD VFFRNRHLQG 101 SLRVEPVFLK DDHRVGFDFL AAIGNGGIVF
LLPFFQIRL m049/a049 90.6% identity over a 139 aa overlap 10 20 30
40 50 60 m049.pep
MRAQAFDQPFGQLLFGQAEHFAPVDGFRVQDIDLDGHQRFFRIVFPVFRNRRLIRAGFCL
||||||||||||||||||||||||||||||:||||||||||| :| |||| |: || a049
MRAQAFDQPFGQLLFGQAEHFAPVDGFRVQNIDLDGHQRFFRTAFAVFRNPVCRRTRFCR 10 20
30 40 50 60 70 80 90 100 110 120 m049.pep
VGVFPAFNLSGFKFDTVFFGIKPDSPPRFDVFFRNRHLQGSLRVEPVFLKDDHRVGFDFL
:||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| a049
IGVFPAFNLSGFKFGTVFFGIKPDSPPRFDVFFRNRHLQGSLRVEPVFLKDDHRVGFDFL 70 80
90 100 110 120 130 139 m049.pep AAIGNGGIVFLLPFFQIRL
||||||||||||||||||| a049 AAIGNGGIVFLLPFFQIRL 130
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 049
shows 86.3% identity over a 139 aa overlap with a predicted ORF
(ORF 049.ng) from N. gonorrhoeae:
TABLE-US-00367 m049/g049 10 20 30 40 50 60 m049.pep
MRAQAFDQPFGQLLFGQAEHFAPVDGFRVQDIDLDGHQRFFRIVFPVFRNRRLIRAGFCL
|||||||||||||||||||||||||||||||||||||||:|| :| |||| |:||| g049
MRAQAFDQPFGQLLFGQAEHFAPVDGFRVQDIDLDGHQRLFRTAFAVFRNPVCRRIGFCR 10 20
30 40 50 60 70 80 90 100 110 120 m049.pep
VGVFPAFNLSGFKFDTVFFGIKPDSPPRFDVFFRNRHLQGSLRVEPVFLKDDHRVGFDFL
:|||||:|| |||| ||||||:|||||||||||||||||||||||||||||||||||||| g049
IGVFPALNLCGFKFGTVFFGIEPDSPPRFDVFFRNRHLQGSLRVEPVFLKDDHRVGFDFL 70 80
90 100 110 120 130 139 m049.pep AAIGNGGIVFLLPFFQIRL
||||||::||:|||:|||| g049 AAIGNGAVVFFLPFLQIRLX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 211>:
TABLE-US-00368 g050.seq 1 atgggcgCGG GCTGGTGTCC TCCCGGCATC
TTGGGCATCG GCATCGGCGg 51 cacgcccGAA AAAGccgtgt TGATGGcaaA
AGAATCCCTG ATGAGCCACA 101 TCGAcatCca aGaATTGCAG GAAAAAGCCG
CGTccggggc ggaattgtcc 151 accaccgaAG ccCTGCGCCT cGAACTCTTT
GAAAAGGTCA ACGCGCTGGG 201 CATCGGCGCG CAAGGCTTGG GCGGTCTGAC
CACCGTGTTG GACGTGAAAA 251 TCCTCGATTA CCCGACCCAT GCCGCCTCCA
AACCGATTGC CATGATTCCC 301 AACTGTGCcg ccacCCGcca cgtcgAATTT
GAATTGgACG GCTCAGGtcc 351 TGTCGAactc acgccGCcgc gtgtCGAAGA CTGA
This corresponds to the amino acid sequence <SEQ ID 212; ORF
050.ng>:
TABLE-US-00369 g050.pep 1 MGAGWCPPGI LGIGIGGTPE KAVLMAKESL
MSHIDIQELQ EKAASGAELS 51 TTEALRLELF EKVNALGIGA QGLGGLTTVL
DVKILDYPTH AASKPIAMIP 101 NCAATRHVEF ELDGSGPVEL TPPRVED*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 213>:
TABLE-US-00370 m050.seq 1 ATGGGCGCGG GCTGGTGTCC TCCCGGCATC
TTGGGTATCG GCATCGGCGG 51 C..agCCgAA AAAGCCGTGC TGATGGCAAA
AGAGTCCCTG ATGAGCCACA 101 TCGACATTCA AGAATTGCAG GAAAAGGCCG
CGTCCGGCGC GgAATTGTCC 151 ACCACCGAAG CCCTGCGCCT CGAACTCTTT
GAAAAAGTCA ACGCGCTGGG 201 CATCGGCGCA CAAGGCTTGG GCGGACTGAC
CACCGTGTTG GACGTGAAAA 251 TCCTCGATTA TCCGACCCAC GCCGCCTCCA
AACCGATTGC CATGATTCCG 301 AACTGCGCCG CCACCCGCCA CGTCGAATTT
GAATTGGACG GCTCAGGCCC 351 TGTCGAACTC ACGCCGCCGC GCGTCGAAGA
TGGCCCGATT TGA
This corresponds to the amino acid sequence <SEQ ID 214; ORF
050>:
TABLE-US-00371 m050.pep 1 MGAGWCPPGI LGIGIGGXAE KAVLMAKESL
MSHIDIQELQ EKAASGAELS 51 TTEALRLELF EKVNALGIGA QGLGGLTTVL
DVKILDYPTH AASKPIAMIP 101 NCAATRHVEF ELDGSGPVEL TPPRVEDGPI *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 215>:
TABLE-US-00372 a050.seq 1 ATGGGCGCGG GCTGGTGTCC TCCCGGCATC
TTGGGCATCG GCATCGGCGG 51 TACGCCCGAA AAAGCCGTGT TGATGGCGAA
AGAATCCCTG ATGAGCCACA 101 TCGACATCCA AGAATTGCAG GAAAAAGCCG
CGTCCGGCGC GGAATTGTCC 151 ACCACCGAAG CCCTGCGCCT CGAACTCTTT
GAAAAAGTCA ACGCGCTAGG 201 CATCGGCGCG CAAGGCTTGG GCGGTCTGAC
CACCGTGTTG GACGTGAAAA 251 TCCTCGATTA CCCGACCCAC GCCGCCTCCA
AACCGATTGC CATGATTCCG 301 AACTGCGCCG CCACCCGCCA CGTCGAATTT
GAATTGGACG GCTCAGGCCC 351 TGTCGAACTC ACGCCGCCGC GCGTCGAAGA
CTGGCCC
This corresponds to the amino acid sequence <SEQ ID 216; ORF
050.a>:
TABLE-US-00373 a050.pep 1 MGAGWCPPGI LGIGIGGTPE KAVLMAKESL
MSHIDIQELQ EKAASGAELS 51 TTEALRLELF EKVNALGIGA QGLGGLTTVL
DVKILDYPTH AASKPIAMIP 101 NCAATRHVEF ELDGSGPVEL TPPRVEDWP m050/a050
97.7% identity over a 129 aa overlap 10 20 30 40 50 60 m050.pep
MGAGWCPPGILGIGIGGXAEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELF
|||||||||||||||||: ||||||||||||||||||||||||||||||||||||||||| a050
MGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELF 10 20
30 40 50 60 70 80 90 100 110 120 m050.pep
EKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVEL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a050
EKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVEL 70 80
90 100 110 120 130 m050.pep TPPRVEDGPIX ||||||| | a050
TPPRVEDWP
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 050
shows 98.4% identity over a 127 aa overlap with a predicted ORF
(ORF 050.ng) from N. gonorrhoeae:
TABLE-US-00374 m050/g050 10 20 30 40 50 60 m050.pep
MGAGWCPPGILGIGIGGXAEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELF
|||||||||||||||||: ||||||||||||||||||||||||||||||||||||||||| g050
MGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELF 10 20
30 40 50 60 70 80 90 100 110 120 m050.pep
EKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVEL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g050
EKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVEL 70 80
90 100 110 120 130 m050.pep TPPRVEDGPIX ||||||| g050 TPPRVEDX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 217>:
TABLE-US-00375 g050-1.seq 1 ATGACCGTTA TCAAGCAAGA AGACTTTATT
CAAAGTATCT GCGATGCCTT 51 CCAATTCATC AGCTACTACC ATCCAAAAGA
CTACATCGAC GCGCTTTATA 101 AGGCGTGGCA GAAGGAAGAA AATCCCGCCG
CCAAAGACGC GATGACGCAG 151 ATTTTGGTCA ACAGCCGTAT GTGTGCCGAA
AACAACCGCC CCATCTGCCA 201 AGACACAGGT ATCGCAACCG TCTTCCTCAA
AGTCGGTATG GATGTGCAAT 251 GGGATGCGGA CATGAGCGTG GAAAAGATGG
TTAACGAAGG CGTACGCCGC 301 GCCTACACTT GGGAAGGCAA CACCCTGCGC
GCTTCCGTCC TCGCCGATCC 351 GGCCGGCAAA CGCCAAAACA CCAAAGACAA
CACCCCCGCC GTCATCCACA 401 TGAGCATCGT GCCGGGCGGT AAAGTCGAAG
TAACCTGCGC GGCAAAAGGC 451 GGCGGCTCTG AAAACAAATC CAAACTCGCT
ATGCTCAACC CTTCCGACAA 501 CATCGTCGAT TGGGTATTGA AAACCATCCC
GACGATGGGC GCGGGCTGGT 551 GTCCTCCCGG CATCTTGGGC ATCGGCATCG
GCGGCAcgcC CGAAAAAGCC 601 GTGTTGATGG cgaAAGAATC CCTGATGAGC
CACATCGACA TCCAAGAATT 651 GCAGGAAAAA GCCGCGTCCG GCGCGGAATT
GTCCACCACC GAAGCCCTGC 701 GCCTCGAACT CTTTGAAAAG GTCAACGCGC
TGGGCATCGG CGCGCAAGGC 751 TTGGGCGGTC TGACCACCGT GTTGGACGTG
AAAATCCTCG ATTACCCGAC 801 CCATGCCGCC TCCAAACCGA TTGCCATGAT
TCCCAACTGT GCCGCCACCC 851 GCCACGTCGA ATTTGAATTG GACGGCTCAG
GTCCTGTCGA ACTCACGCCG 901 CCGCGCGTCG AAGACTGACC CGATCTGACT
TACAGCCCCG ACAACGGCAA 951 ACGCGTCGAT GTCGATAAGC TGACCAAAGA
AGAAGTGGCA AGCTGGAAAA 1001 CCGGCGACGT ATTGCTGTTG AACGGCAAAA
TCCTCACCGG CCGCGATGCC 1051 GCGCACAAAC GCCTCGTCAA TATGCTCGAC
AAAGGCGAGG AGTTGCCCGT 1101 CGATTTCACC AACCGCCTGA TTTACTACGT
CGGCCCCGTC GATCCGGTCG 1151 GCGATGAAGT CGTCGGTCCC GCAGGTCCGA
CCACAGCCAC CCGCATGGAC 1201 AAATTTACCC GCCAAATGCT CAAACAAACC
GGCCTCTTGG GCATGATCGG 1251 CAAATCCGAG CGCGGCGCGG CCACCTGCGA
AGCCATCGCC GACAACAAGG 1301 CCGTGTACCT CATGGCAGTC GGCGGCGCGG
CATACCTCGT GGCAAAAGCC 1351 ATCAAATCTT CCAAAGTCTT GGCGTTCCCC
GAATTGGGTA TGGAAGCCGT 1401 TTACGAATTT GAAGTCAAAG ATATGCCCGT
AACCGTCGCC GTGGACAGCA 1451 AAGGCGAATC CATCCACGCC ACCGCCCCGC
GCAAATGGCA GGCGAAAATC 1501 GGCATCATCC CCGTCGAGTC TTGA
This corresponds to the amino acid sequence <SEQ ID 218; ORF
050-1.ng>:
TABLE-US-00376 g050-1.pep 1 MTVIKQEDFI QSICDAFQFI SYYHPKDYID
ALYKAWQKEE NPAAKDAMTQ 51 ILVNSRMCAE NNRPICQDTG IATVFLKVGM
DVQWDADMSV EKMVNEGVRR 101 AYTWEGNTLR ASVLADPAGK RQNTKDNTPA
VIHMSIVPGG KVEVTCAAKG 151 GGSENKSKLA MLNPSDNIVD WVLKTIPTMG
AGWCPPGILG IGIGGTPEKA 201 VLMAKESLMS HIDIQELQEK AASGAELSTT
EALRLELFEK VNALGIGAQG 251 LGGLTTVLDV KILDYPTHAA SKPIAMIPNC
AATRHVEFEL DGSGPVELTP 301 PRVED*PDLT YSPDNGKRVD VDKLTKEEVA
SWKTGDVLLL NGKILTGRDA 351 AHKRLVNMLD KGEELPVDFT NRLIYYVGPV
DPVGDEVVGP AGPTTATRMD 401 KFTRQMLKQT GLLGMIGKSE RGAATCEAIA
DNKAVYLMAV GGAAYLVAKA 451 IKSSKVLAFP ELGMEAVYEF EVKDMPVTVA
VDSKGESIHA TAPRKWQAKI 501 GIIPVES* g050-1/p14407
sp|P14407|FUMB_ECOLI FUMARATE HYDRATASE CLASS I, ANAEROBIC
(FUMARASE) >gi|280063|pir||B44511 fumarate hydratase (EC
4.2.1.2) fumB, iron-dependent - Escherichia coli >gi|146048
(M27058) anaerobic class I fumarase (EC 4.2.1.2) [Escherichia coli]
Length = 548 Score = 172 bits (432), Expect = 4e-42 Identities =
138/488 (28%), Positives = 216/488 (43%), Gaps = 22/488 (4%) Query:
11 QSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAENNRPICQDTG 70
Q+ DA + H K L+ E + K Q L NS + A+ P CQDTG Sbjct: 53
QAFHDASFMLRPAHQKQVAAILHDPEASEND---KYVALQFLRNSEIAAKGVLPTCQDTG 109
Query: 71
IATVFLKVGMDVQWDADMSVEKMVNEGVRRAYTWEGNTLRASVLADPAGKRQNTKDNTPA 130 A
+ K G V W E+ +++GV Y E N + A K NT N PA Sbjct: 110
TAIIVGKKGQRV-WTGGGD-EETLSKGVYNTYI-EDNLRYSQNAALDMYKEVNTGTNLPA 166
Query: 131
VIHMSIVPGGKVEVTCAAKGGGSENKSKL-----AMLNPSDNIVDWVLKTIPTMGAGWCP 185 I
+ V G + + C AKGGGS NK+ L A+L P + +++++ + T+G CP Sbjct: 167
QIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPG-KLKNFLVEKMRTLGTAACP 225
Query: 186
PXXXXXXXXXTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEKVNXXX 245 P
T + L + +H EL + + L EL E+ Sbjct: 226
PYHIAFVIGGTSAETNLKTVKLASAHY-YDELPTEGNEHGQAFRDVQLEQELLEEAQKLG 284
Query: 246
XXXXXXXXXTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSG----PVELTPP 301
D++++ P H AS P+ M +C+A R+++ +++ G +E P Sbjct: 285
LGAQFGGKYFAH-DIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPG 343
uery: 302
RVEDXPDLTYSPDNGKRVDVDKLTKE---EVASWKTGDVLLLNGKILTGRDAAHKRLVNM 358 +
+VD+++ KE +++ + L L G I+ GRD AH +L + Sbjct: 344
QYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKEL 403
Query: 359
LDKGEELPVDFTNRLIYYXXXXXXXXXXXXXXXXXTTATRMDKFTRQMLKQTGLLGMIGK 418 +D
G+ELP + IYY TTA RMD + + G + M+ K Sbjct: 404
IDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAK 463
Query: 419
SERGAATCEAIADNKAVYLMAVGG-AAYLVAKAIKSSKVLAFPELGMEAVYEFEVKDMPV 477 R
+A + YL ++GG AA L ++IK + +A+PELGMEA+++ EV+D P Sbjct: 464
GNRSQQVTDACHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPA 523
Query: 478 TVAVDSKG 485 + VD KG Sbjct: 524 FILVDDKG 531
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 219>:
TABLE-US-00377 m050-1.seq 1 ATGACCGTCA TCAAACAGGA AGACTTTATC
CAAAGCATTT GCGATGCCTT 51 CCAATTCATC AGCTACTATC ATCCCAAAGA
CTACATCGAC GCGCTTTATA 101 AGGCGTGGCA GAAGGAAGAA AATCCTGCCG
CCAAAGACGC GATGACGCAG 151 ATTTTGGTCA ACAGCCGTAT GTGTGCGGAA
AACAACCGCC CCATCTGCCA 201 AGACACAGGT ATCGCAACCG TCTTCCTCAA
AGTCGGTATG AACGTCCAAT 251 GGGATGCGGA CATGAGCGTG GAAGAGATGG
TTAACGAAGG CGTACGCCGC 301 GCCTACACTT GGGAAGGCAA TACGCTGCGC
GCTTCCGTCC TCGCCGATCC 351 GGCCGGCAAA CGCCAAAACA CCAAAGACAA
CACCCCCGCC GTCATCCATA 401 TGAGCATCGT GCCGGGCGGT AAAGTCGAAG
TAACCTGCGC GGCAAAAGGC 451 GGCGGCTCTG AAAACAAATC CAAACTCGCC
ATGCTCAATC CTTCCGACAA 501 CATCGTCGAT TGGGTATTGA AAACCATCCC
GACCATGGGC GCGGGCTGGT 551 GTCCTCCCGG CATCTTGGGT ATCGGCATCG
GCGGCACGCC CGAAAAAGCC 601 GTGCTGATGG CAAAAGAGTC CCTGATGAGC
CACATCGACA TTCAAGAATT 651 GCAGGAAAAG GCCGCGTCCG GCGCGGAATT
GTCCACCACC GAAGCCCTGC 701 GCCTCGAACT CTTTGAAAAA GTCAACGCGC
TGGGCATCGG CGCACAAGGC 751 TTGGGCGGAC TGACCACCGT GTTGGACGTG
AAAATCCTCG ATTATCCGAC 801 CCACGCCGCC TCCAAACCGA TTGCCATGAT
TCCGAACTGC GCCGCCACCC 851 GCCACGTCGA ATTTGAATTG GACGGCTCAG
GCCCTGTCGA ACTCACGCCG 901 CCGCGCGTCG AAGACTGGCC CGATTTGACT
TACAGCCCCG ACAACGGCAA 951 ACGCGTCGAT GTCGACAAGC TGACCAAAGA
AGAAGTGGCA AGCTGGAAAA 1001 CCGGCGACGT ATTGCTGTTG AACGGCAAAA
TCCTCACCGG CCGCGATGCC 1051 GCACACAAAC GCCTCGTCGA TATGCTCAAC
AAAGGCGAAG AATTGCCCGT 1101 CGATTTCACC AACCGCCTGA TTTACTACGT
CGGCCCCGTC GATCCGGTCG 1151 GCGATGAAGT CGTCGGTCCG GCAGGTCCGA
CCACAGCCAC CCGCATGGAC 1201 AAATTCACCC GCCAAATGCT CGAACAAACC
GACCTCTTGG GCATGATCGG 1251 CAAATCCGAG CGCGGCGTGG CCACCTGCGA
AGCCATCGCC GACAACAAAG 1301 CCGTGTACCT CATGGCAGTC GGCGGCGCGG
CGTATCTCGT GGCAAAAGCC 1351 ATCAAATCTT CCAAAGTCTT GGCGTTCCCC
GAATTGGGCA TGGAAGCCAT 1401 TTACGAATTT GAAGTCAAAG ACATGCCCGT
AACCGTCGCC GTAGATAGCA 1451 AAGGCGAATC CATCCACGCC ACCGCCCCGC
GCAAATGGCA GGCGAAAATC 1501 GGCATCATCC CCGTCGAATC TTGA
This corresponds to the amino acid sequence <SEQ ID 220; ORF
050-1>:
TABLE-US-00378 m050-1.pep 1 MTVIKQEDFI QSICDAFQFI SYYHPKDYID
ALYKAWQKEE NPAAKDAMTQ 51 ILVNSRMCAE NNRPICQDTG IATVFLKVGM
NVQWDADMSV EEMVNEGVRR 101 AYTWEGNTLR ASVLADPAGK RQNTKDNTPA
VIHMSIVPGG KVEVTCAAKG 151 GGSENKSKLA MLNPSDNIVD WVLKTIPTMG
AGWCPPGILG IGIGGTPEKA 201 VLMAKESLMS HIDIQELQEK AASGAELSTT
EALRLELFEK VNALGIGAQG 251 LGGLTTVLDV KILDYPTHAA SKPIAMIPNC
AATRHVEFEL DGSGPVELTP 301 PRVEDWPDLT YSPDNGKRVD VDKLTKEEVA
SWKTGDVLLL NGKILTGRDA 351 AHKRLVDMLN KGEELPVDFT NRLIYYVGPV
DPVGDEVVGP AGPTTATRMD 401 KFTRQMLEQT DLLGMIGKSE RGVATCEAIA
DNKAVYLMAV GGAAYLVAKA 451 IKSSKVLAFP ELGMEAIYEF EVKDMPVTVA
VDSKGESIHA TAPRKWQAKI 501 GIIPVES* m050-1/g050-1 98.2% identity in
507 aa overlap 10 20 30 40 50 60 m050-1.pep
MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g050-1
MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAE 10 20
30 40 50 60 70 80 90 100 110 120 m050-1.pep
NNRPICQDTGIATVFLKVGMNVQWDADMSVEEMVNEGVRRAYTWEGNTLRASVLADPAGK
||||||||||||||||||||:||||||||||:|||||||||||||||||||||||||||| g050-1
NNRPICQDTGIATVFLKVGMDVQWDADMSVEKMVNEGVRRAYTWEGNTLRASVLADPAGK 70 80
90 100 110 120 130 140 150 160 170 180 m050-1.pep
RQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g050-1
RQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMG 130
140 150 160 170 180 190 200 210 220 230 240 m050-1.pep
AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g050-1
AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEK 190
200 210 220 230 240 250 260 270 280 290 300 m050-1.pep
VNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g050-1
VNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTP 250
260 270 280 290 300 310 320 330 340 350 360 m050-1.pep
PRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVDMLN |||||
||||||||||||||||||||||||||||||||||||||||||||||||||:||: g050-1
PRVEDXPDLTYSPDNGKRVDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVNMLD 310
320 330 340 350 360 370 380 390 400 410 420 m050-1.pep
KGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTDLLGMIGKSE
|||||||||||||||||||||||||||||||||||||||||||||||:|| ||||||||| g050-1
KGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLKQTGLLGMIGKSE 370
380 390 400 410 420 430 440 450 460 470 480 m050-1.pep
RGVATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPVTVA
||:|||||||||||||||||||||||||||||||||||||||||||:||||||||||||| g050-1
RGAATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAVYEFEVKDMPVTVA 430
440 450 460 470 480 490 500 m050-1.pep VDSKGESIHATAPRKWQAKIGIIPVESX
|||||||||||||||||||||||||||| g050-1 VDSKGESIHATAPRKWQAKIGIIPVESX
490 500
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 221>:
TABLE-US-00379 a050-1.seq 1 ATGACCGTCA TCAAACAGGA AGACTTTATC
CAAAGCATTT GCGATGCCTT 51 CCAATTCATC AGCTACTACC ATCCCAAAGA
CTACATCGAC GCGCTTTATA 101 AGGCGTGGCA GAAGGAAGAA AACCCCGCCG
CCAAAGACGC GATGACGCAG 151 ATTTTGGTCA ACAGCCGCAT GTGTGCCGAA
AACAACCGCC CCATCTGCCA 201 AGATACCGGT ATCGCGACCG TGTTTTTGAA
AGTCGGTATG GATGTGCAAT 251 GGGATGCAGA CATGAGCGTC GAAGAGATGG
TTAACGAAGG CGTGCGCCGC 301 GCCTACACTT GGGAAGGCAA TACGCTGCGC
GCTTCCGTTC TCGCCGACCC 351 CGCCGGCAAA CGCCAAAATA CCAAAGACAA
CACGCCCGCC GTCATCCATA 401 TGAGCATCGT GCCGGGCGAC AAAGTCGAAG
TAACCTGCGC GGCAAAAGGC 451 GGCGGTTCTG AAAACAAATC CAAACTCGCC
ATGCTCAACC CTTCCGACAA 501 CATCGTCGAT TGGGTATTGA AAACCATTCC
GACCATGGGC GCGGGCTGGT 551 GTCCTCCCGG CATCTTGGGC ATCGGCATCG
GCGGTACGCC CGAAAAAGCC 601 GTGTTGATGG CGAAAGAATC CCTGATGAGC
CACATCGACA TCCAAGAATT 651 GCAGGAAAAA GCCGCGTCCG GCGCGGAATT
GTCCACCACC GAAGCCCTGC 701 GCCTCGAACT CTTTGAAAAA GTCAACGCGC
TAGGCATCGG CGCGCAAGGC 751 TTGGGCGGTC TGACCACCGT GTTGGACGTG
AAAATCCTCG ATTACCCGAC 801 CCACGCCGCC TCCAAACCGA TTGCCATGAT
TCCGAACTGC GCCGCCACCC 851 GCCACGTCGA ATTTGAATTG GACGGCTCAG
GCCCTGTCGA ACTCACGCCG 901 CCGCGCGTCG AAGACTGGCC CGATTTGACT
TACAGCCCCG ACAACGGCAA 951 ACGCGTCGAT GTCGACAAGC TGACCAAAGA
AGAAGTGGCA AGCTGGAAAA 1001 CCGGCGACGT ATTGCTGTTG AACGGCAAAA
TCCTCACCGG CCGCGATGCC 1051 GCACACAAAC GCCTCGTCGA TATGCTCGAC
AAAGGCGAAG AATTGCCCGT 1101 CGATTTCACC AACCGCCTGA TTTACTACGT
CGGCCCCGTC GATCCGGTCG 1151 GCGACGAAAT CGTCGGCCCA GCAGGTCCGA
CCACCGCCAC CCGCATGGAC 1201 AAATTCACCC GCCAAATGCT CGAACAAACC
GACCTCTTGG GCATGATCGG 1251 CAAATCCGAG CGCGGCGCGG CCACCTGCGA
AGCCATCGCC GACAACAAAG 1301 CCGTGTACCT CATGGCAGTC GGCGGCGCGG
CGTATCTCGT GGCAAAAGCC 1351 ATCAAATCTT CCAAAGTCTT GGCGTTCCCC
GAATTGGGCA TGGAAGCCAT 1401 TTACGAATTT GAAGTCAAAG ACATGCCCGT
AACCGTCGCC GTAGACAGCA 1451 AAGGCGAATC CATCCACGCC ACCGCCCCGC
CCCAATGGCA GGCGAAAATC 1501 GGCATCATCC CCGTCAAATC TTGA
This corresponds to the amino acid sequence <SEQ ID 222; ORF
050-1.a>:
TABLE-US-00380 a050-1.pep 1 MTVIKQEDFI QSICDAFQFI SYYHPKDYID
ALYKAWQKEE NPAAKDAMTQ 51 ILVNSRMCAE NNRPICQDTG IATVFLKVGM
DVQWDADMSV EEMVNEGVRR 101 AYTWEGNTLR ASVLADPAGK RQNTKDNTPA
VIHMSIVPGD KVEVTCAAKG 151 GGSENKSKLA MLNPSDNIVD WVLKTIPTMG
AGWCPPGILG IGIGGTPEKA 201 VLMAKESLMS HIDIQELQEK AASGAELSTT
EALRLELFEK VNALGIGAQG 251 LGGLTTVLDV KILDYPTHAA SKPIAMIPNC
AATRHVEFEL DGSGPVELTP 301 PRVEDWPDLT YSPDNGKRVD VDKLTKEEVA
SWKTGDVLLL NGKILTGRDA 351 AHKRLVDMLD KGEELPVDFT NRLIYYVGPV
DPVGDEIVGP AGPTTATRMD 401 KFTRQMLEQT DLLGMIGKSE RGAATCEAIA
DNKAVYLMAV GGAAYLVAKA 451 IKSSKVLAFP ELGMEAIYEF EVKDMPVTVA
VDSKGESIHA TAPPQWQAKI 501 GIIPVKS* a050-1/m050-1 98.4% identity in
507 aa overlap 10 20 30 40 50 60 a050-1.pep
MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m050-1
MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAAKDAMTQILVNSRMCAE 10 20
30 40 50 60 70 80 90 100 110 120 a050-1.pep
NNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAYTWEGNTLRASVLADPAGK
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| m050-1
NNRPICQDTGIATVFLKVGMNVQWDADMSVEEMVNEGVRRAYTWEGNTLRASVLADPAGK 70 80
90 100 110 120 130 140 150 160 170 180 a050-1.pep
RQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMG
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| m050-1
RQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLAMLNPSDNIVDWVLKTIPTMG 130
140 150 160 170 180 190 200 210 220 230 240 a050-1.pep
AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m050-1
AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQEKAASGAELSTTEALRLELFEK 190
200 210 220 230 240 250 260 270 280 290 300 a050-1.pep
VNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m050-1
VNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAMIPNCAATRHVEFELDGSGPVELTP 250
260 270 280 290 300 310 320 330 340 350 360 a050-1.pep
PRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVDMLD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: m050-1
PRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKTGDVLLLNGKILTGRDAAHKRLVDMLN 310
320 330 340 350 360 370 380 390 400 410 420 a050-1.pep
KGEELPVDFTNRLIYYVGPVDPVGDEIVGPAGPTTATRMDKFTRQMLEQTDLLGMIGKSE
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| m050-1
KGEELPVDFTNRLIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQMLEQTDLLGMIGKSE 370
380 390 400 410 420 430 440 450 460 470 480 a050-1.pep
RGAATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPVTVA
||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m050-1
RGVATCEAIADNKAVYLMAVGGAAYLVAKAIKSSKVLAFPELGMEAIYEFEVKDMPVTVA 430
440 450 460 470 480 490 500 a050-1.pep VDSKGESIHATAPPQWQAKIGIIPVKSX
||||||||||||| :||||||||||:|| m050-1 VDSKGESIHATAPRKWQAKIGIIPVESX
490 500
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 223>:
TABLE-US-00381 g052.seq 1 ATGGCTTTGG TGGCGGAGGA AACGGAAATA
TCCGCGCCGT GTTTCAAAGG 51 CTGCGAGCCG ACGGGCGACA GCAGGCTGTT
GTCCACCACC AAGAGCGCGC 101 CGATGCCGTG CGCCAATTCC GCCAAGGCTT
CCAAGTCGGC CACTTCGCCC 151 AAGGGGTTGG ACGGCGTTTC CAAAAACAGC
AGTTTGGTGT TGGCTTTGAC 201 GGCGGCTTTC CATTCATTTA TATCAGTCGG
CGACACGCGG CTCACTCCGA 251 TGCCGAATTT GGTAACGATG TTATTGATAA
AGCCGACGGT CGTGCCGAAC 301 AGGCTGCGGC TGGAAACCAC ATGGTCGCCC
GCCTGCAGGA AGGTGAAAAA 351 CGCCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 224; ORF
052.ng>:
TABLE-US-00382 g052.pep 1 MALVAEETEI SAPCFKGCEP TGDSRLLSTT
KSAPMPCANS AKASKSATSP 51 KGLDGVSKNS SLVLALTAAF HSFISVGDTR
LTPMPNLVTM LLIKPTVVPN 101 RLRLETTWSP ACRKVKNAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 225>:
TABLE-US-00383 m052.seq 1 ATGGCTTTGG TGGCGGAGGA AACGGAAATA
TCCGCGCCGT GTTTCAAAGG 51 CTGCGAGCCG ACGGGCGACA GCAGGCTGTT
GTCCACCACC AAGAGCGCGC 101 CGATGCCGTG CGCCAATTCC GCCAAGGCTT
CCAAGTCGGC CACTTCGCCC 151 AAGGGGTTGG ACGGCGTTTC CAAAAACAGC
AGTTTGGTGT TGGCTTTGAC 201 GGCGGCTTTC CATTCATTTA TATCAGTCGG
CGACACGCGG CTCACTCCGA 251 TGCCGAATTT GGTAACGATG TTATTGATAA
AGCCGACGGT CGTGCCGAAC 301 AGGCTGCGGC TGGAAACCAC ATGGTCGCCC
GCCTGCAGGA AGGTGAAAAA 351 CGCCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 226; ORF
052>:
TABLE-US-00384 m052.pep 1 MALVAEETEI SAPCFKGCEP TGDSRLLSTT
KSAPMPCANS AKASKSATSP 51 KGLDGVSKNS SLVLALTAAF HSFISVGDTR
LTPMPNLVTM LLIKPTVVPN 101 RLRLETTWSP ACRKVKNAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 227>:
TABLE-US-00385 a052.seq 1 ATGGCTTTGG TCGCGGAGGA AACGGAAATA
TCCGCGCCGT GTTTCAAAGG 51 CTGAGAGCCG ACAGGCGACA GCAGGCTGTT
GTCCACCACC AAGAGCGCGC 101 CGATGCCGTG CGCCAATTCC GCCAAGGCTT
CCAAGTCGGC CACTTCTCCC 151 AAGGGATTGG ACGGCGTTTC CAAAAACAGC
AGTTTGGTGT TGGCTTTGAC 201 GGCGGCTTTC CATTCGTTTA TATCAGTCGG
CGACACGTGA CTCACTTCGA 251 TGCCGAATTT GGTAACGATG TTATTGATAA
AGCCGACGGT CGTGCCGAAC 301 AGGCTGCGGC TGGAAATCAC ATGGTCGCCC
GCCTGCAAAA AGGTGAAAAA 351 CGCCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 228; ORF
052.a>:
TABLE-US-00386 a052.pep 1 MALVAEETEI SAPCFKG*EP TGDSRLLSTT
KSAPMPCANS AKASKSATSP 51 KGLDGVSKNS SLVLALTAAF HSFISVGDT*
LTSMPNLVTM LLIKPTVVPN 101 RLRLEITWSP ACKKVKNAA* m052/a052 95.8%
identity over a 119 aa overlap 10 20 30 40 50 60 m052.pep
MALVAEETEISAPCFKGCEPTGDSRLLSTTKSAPMPCANSAKASKSATSPKGLDGVSKNS
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| a052
MALVAEETEISAPCFKGXEPTGDSRLLSTTKSAPMPCANSAKASKSATSPKGLDGVSKNS 10 20
30 40 50 60 70 80 90 100 110 120 m052.pep
SLVLALTAAFHSFISVGDTRLTPMPNLVTMLLIKPTVVPNRLRLETTWSPACRKVKNAAX
||||||||||||||||||| || |||||||||||||||||||||| ||||||:||||||| a052
SLVLALTAAFHSFISVGDTXLTSMPNLVTMLLIKPTVVPNRLRLEITWSPACKKVKNAAX 70 80
90 100 110 120
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 052
shows 95.8% identity over a 119 aa overlap with a predicted ORF
(ORF 052.ng) from N. gonorrhoeae:
TABLE-US-00387 m052/g052 10 20 30 40 50 60 m052.pep
MALVAEETEISAPCFKGCEPTGDSRLLSTTKSAPMPCANSAKASKSATSPKGLDGVSKNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g052
MALVAEETEISAPCFKGCEPTGDSRLLSTTKSAPMPCANSAKASKSATSPKGLDGVSKNS 10 20
30 40 50 60 70 80 90 100 110 120 m052.pep
SLVLALTAAFHSFISVGDTWLTSMPNLATMLLIKPTVVPNRLRLEITWSPACKKVKNAAX
||||||||||||||||||| || ||||:||||||||||||||||| ||||||:||||||| g052
SLVLALTAAFHSFISVGDTRLTPMPNLVTMLLIKPTVVPNRLRLETTWSPACRKVKNAAX 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 229>:
TABLE-US-00388 g073.seq 1 ATGTGTATGC CATACGCAAT AAGGGTTTCA
GACGGCATCT GCCGCATTTT 51 TCCGCCGATG CCGTCTGAAA CACGCAATCA
GCGCGCGAGT GCCTGTTTCA 101 AATCGTCAAT CAAATCGCCA ACATATTCCA
AACCGACCGA CAGGCGCACC 151 AGTCCGGGGC GGatacCGGC GGCGAGTTTT
TCTTCGGGCT GCATCCTGCC 201 GTGCGTGGTT GTCCACGGAT TGGTGATGGT
CGAGCGCACG TCGCCGAGGT 251 TGGCGGTACG GGAAAAGAGT TCCACGACTT
TCCACGCGGC TGCTTGGTCG 301 GCGACTTCAA AACCGATGAC GATGCCGCCG
CCGTTTTGCT GTTTGCGGAT 351 AAGCTCCGCC TGCGGATGGT CGGGCAATCC
GGTGTAG
This corresponds to the amino acid sequence <SEQ ID 230; ORF
073.ng>:
TABLE-US-00389 g073.pep 1 MCMPYAIRVS DGICRIFPPM PSETRNQRAS
ACFKSSIKSP TYSKPTDRRT 51 SPGRIPAASF SSGCILPCVV VHGLVMVERT
SPRLAVREKS STTFHAAAWS 101 ATSKPMTMPP PFCCLRISSA CGWSGNPV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 231>:
TABLE-US-00390 m073.seq 1 ATGTGTATGC CATATAAGAT AAGGGTTTCA
GACGGCATCT GCTGTCCAAT 51 GCCGTCTGAA ACACGCAATC AGCGTGCGAG
TGCCTGTTTC AAATCGTCAA 101 TCAAATCGCC AACATATTCC AAACCGACCG
ACAGGCGCAC CAATCCGGGG 151 CGGATGTTGG CGGCGAGTTT TTCTTCGGGC
TGCATCCTGC CGTGCGTGGT 201 TGTCCACGGG TGGGTAATGG TCGAGCGCAC
GTCACCGAGG TTGGCGGTGC 251 GGGAAAAGAG TTCCACGCCG TCCACAACTT
TCCACGCCGC TTCTTGATCG 301 GCAACTTCAA AGCCGATGAC GATGCCGCCG
CCGTTTTGCT GTTTGCGGAT 351 AAGCGCCGCC TGAGGATGGT CGGACAATCC
GGTGTAG
This corresponds to the amino acid sequence <SEQ ID 232; ORF
073>:
TABLE-US-00391 m073.pep 1 MCMPYKIRVS DGICCPMPSE TRNQRASACF
KSSIKSPTYS KPTDRRTNPG 51 RMLAASFSSG CILPCVVVHG WVMVERTSPR
LAVREKSSTP STTFHAASXS 101 ATSKPMTMPP PFCCLRISAA XGWSDNPV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 233>:
TABLE-US-00392 a073.seq 1 ACGTGTATGT CATATAAGAT AAGGGTTTCA
GACGGCATTT GCGGTGTTTT 51 TCCGCCGATG CCGTCTGAA. CACGCAATCA
GCGCGCGAGT GCCTGTTTCA 101 AATCGTCAAT CAAATCGCCA ACATATTCCA
AACCGACCGA CAGGCGCACC 151 AATCCGGGGC GGATGTTGGC GGCGAGTTTT
TCTTCGGGCT GCATCCTGCC 201 GTGCGTGGTT GTCCACGGAT GGGTAATGGT
CGAGCGCACG TCGCCGAGGT 251 TGGCGGTACG GGAGAAAAGT TCGACGCCGT
CCACGACTTT CCACGCGGCT 301 GCTTGGTCGG CGACTTCAAA GCCGATGACG
ATGCCGCCGC CGTTTTGCTG 351 TTTGCGGATA AGCTCCGCCT GAGGATGGTC
GGGTAATCCG GTGTAA
This corresponds to the amino acid sequence <SEQ ID 234; ORF
073.a>:
TABLE-US-00393 a073.pep 1 TCMSYKIRVS DGICGVFPPM PSEXRNQRAS
ACFKSSIKSP TYSKPTDRRT 51 NPGRMLAASF SSGCILPCVV VHGWVMVERT
SPRLAVREKS STPSTTFHAA 101 AWSATSKPMT MPPPFCCLRI SSA*GWSGNP V*
m073/a073 92.3% identity over a 130 aa overlap 10 20 30 40 50
m073.pep
MCMPYKIRVSDGICC---PMPSETRNQRASACFKSSIKSPTYSKPTDRRTNPGRMLAASF ||
|||||||||| |||||:|||||||||||||||||||||||||||||||||||| a073
TCMSYKIRVSDGICGVFPPMPSEXRNQRASACFKSSIKSPTYSKPTDRRTNPGRMLAASF 10 20
30 40 50 60 60 70 80 90 100 110 m073.pep
SSGCILPCVVVHGWVMVERTSPRLAVREKSSTPSTTFHAASXSATSKPMTMPPPFCCLRI
||||||||||||||||||||||||||||||||||||||||: |||||||||||||||||| a073
SSGCILPCVVVHGWVMVERTSPRLAVREKSSTPSTTFHAAAWSATSKPMTMPPPFCCLRI 70 80
90 100 110 120 120 129 m073.pep SAAXGWSDNPVX |:||||| |||| a073
SSAXGWSGNPVX 130
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 073
shows 87.0% identity over a 131 aa overlap with a predicted ORF
(ORF 073.ng) from N. gonorrhoeae:
TABLE-US-00394 m073/g073 10 20 30 40 50 m073.pep
MCMPYKIRVSDGICC---PMPSETRNQRASACFKSSIKSPTYSKPTDRRTNPGRMLAASF |||||
|||||||| ||||||||||||||||||||||||||||||||:|||: |||| g073
MCMPYAIRVSDGICRIFPPMPSETRNQRASACFKSSIKSPTYSKPTDRRTSPGRIPAASF 10 20
30 40 50 60 60 70 80 90 100 110 m073.pep
SSGCILPCVVVHGWVMVERTSPRLAVREKSSTPSTTFHAASXSATSKPMTMPPPFCCLRI
||||||||||||| |||||||||||||||||| |||||: |||||||||||||||||| g073
SSGCILPCVVVHGLVMVERTSPRLAVREKSST---TFHAAAWSATSKPMTMPPPFCCLRI 70 80
90 100 110 120 129 m073.pep SAAXGWSDNPVX |:| ||| |||| g073
SSACGWSGNPVX 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 235>:
TABLE-US-00395 g075.seq 1 ATGCCGCCTT ACTTCATCAC CCTCTTAACG
ATGGAAAATA CAAAAAGCGC 51 GGCGAAAACG CCCACTACAA TCCAACCGGC
TTCCATACCG TCCGCTTTTG 101 CGGCTTCCAA AGCGTTTTTT GCCGTTTCGG
GCAACGCTGC GTTTGCCTGT 151 GCCGCCAAAG CCAGCGGGGC GGCTGTTACA
ACAGCCAGTT TTGCGCCGTA 201 TTTACGGCAG GTGTTAATAA ATTTCATGAT
ATTTTCCTTT ACGAAATTTT 251 TAAAAAAATG TGTTTGCGGG CTTTGTGAAG
GTTTTAGAGA CCGCCTGCCG 301 GGCCTCTTAA ACTTAATCTT CTTTTTCGTA
GAATCCGAAA ATTACAAATT 351 CCCCGCCTAT CTCTTCCAAT GCCGAGCTAA
AAGCGTCTTC ATAGCTGTCA 401 TATTTACCGG CTGA
This corresponds to the amino acid sequence <SEQ ID 236; ORF
075.ng>:
TABLE-US-00396 g075.pep 1 MPPYFITLLT MENTKSAAKT PTTIQPASIP
SAFAASKAFF AVSGNAAFAC 51 AAKASGAAVT TASFAPYLRQ VLINFMIFSF
TKFLKKCVCG LCEGFRDRLP 101 GLLNLIFFFV ESENYKFPAY LFQCRAKSVF
IAVIFTG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 237>:
TABLE-US-00397 m075.seq 1 ATGCCGTCTT ACTTCATCAC TCTCTTAACG
ATGGAAAATA CAAAAAGCGC 51 GGCGAAAATG CCCACTACAA TCCAACCGGC
TTCCATACCG TCCGCTTTTG 101 CGGCTTCCAA AGCGTTTTTT GCCGTATCGG
GCAACGTTGC ATTTGCATGT 151 GCGGCCAAAG CCAGGGGAGC AGCTGTTACA
ACAGCCAGTT TTGCGCCGTA 201 TTTACGGCAG GTGTTAATAA ATTTCATGAT
ATTTTCCTTC AAAAAGTGTT 251 TGGCGGTAAT GGATGGAGCG TTTTTCAGAC
GACCGCCGAA CATCCGAAAA 301 TCAGTCTTTC AAAAATCCGA ATACGACAAA
TTCGTATTGG TTGCCGATTT 351 CTTCCAAACC TGCGTTAATC GCTTCTTCGA
AGTCGTAGAA ATAATCGGCA 401 TTGGTGATTA A
This corresponds to the amino acid sequence <SEQ ID 238; ORF
075>:
TABLE-US-00398 m075.pep 1 MPSYFITLLT MENTKSAAKM PTTIQPASIP
SAFAASKAFF AVSGNVAFAC 51 AAKARGAAVT TASFAPYLRQ VLINFMIFSF
KKCLAVMDGA FFRRPPNIRK 101 SVFQKSEYDK FVLVADFFQT CVNRFFEVVE
IIGIGD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 075
shows 65.7% identity over a 137 aa overlap with a predicted ORF
(ORF 075.ng) from N. gonorrhoeae:
TABLE-US-00399 m075/g075 10 20 30 40 50 60 m075.pep
MPSYFITLLTMENTKSAAKMPTTIQPASIPSAFAASKAFFAVSGNVAFACAAKARGAAVT ||
|||||||||||||||| |||||||||||||||||||||||||:|||||||| ||||| g075
MPPYFITLLTMENTKSAAKTPTTIQPASIPSAFAASKAFFAVSGNAAFACAAKASGAAVT 10 20
30 40 50 60 70 80 90 100 110 m075.pep
TASFAPYLRQVLINFMIFSF----KKCLAVMDGAFFRRPPNIRKSVFQKSEYDKFVLVAD
|||||||||||||||||||| |||: : :| | |:: : :| | ::: : | g075
TASFAPYLRQVLINFMIFSFTKFLKKCVCGLCEGFRDRLPGLLNLIFFFVESENYKFPAY 70 80
90 100 110 120 120 130 m075.pep FFQTCVNRFFEVVEIIGIGDX :|| :: | :| :
| g075 LFQCRAKSVFIAVIFTGX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 239>:
TABLE-US-00400 a075.seq 1 ATGCCGTCTT ACTTCATCAC TCTCTTAACG
ATGGAAAAGA CAAAAAGCGC 51 GGCGAAAACG CCCACTACAA TCCAACCGGC
TTCCATACCG TCCGCTTTTG 101 CGGCTTCCAA AGCGTTTTTT GCTGTATCGG
GCAACGTTGC ATTTGCATGT 151 GCGGCCAAAG CCAGGGGAGC AGCTGTTACA
ACAGCCAGTT TTGCGCCGTA 201 TTTACGGCAG GTGTTAATAA ATTTCATGAT
ATTTTCCTTC AAAAAGTGTT 251 TGGCGGTAAT GGATGGAGCG TTTTTCAGAC
GACCGCCGAA CATCCGAAAA 301 TCAGTCTTTC AAAAATCCGA ATACGACAAA
TTCGTATTGG TTGCCGATTT 351 CTTCCAAACC TGCGTTAATC GCTTCTTCGA
AGTCGTAGAA ATAATCGGCA 401 TTGGTGATTA A
This corresponds to the amino acid sequence <SEQ ID 240; ORF
075.a>:
TABLE-US-00401 a075.pep 1 MPSYFITLLT MEKTKSAAKT PTTIQPASIP
SAFAASKAFF AVSGNVAFAC 51 AAKARGAAVT TASFAPYLRQ VLINFMIFSF
KKCLAVMDGA FFRRPPNIRK 101 SVFQKSEYDK FVLVADFFQT CVNRFFEVVE IIGIGD*
m075/a075 98.5% identity over a 136 aa overlap 10 20 30 40 50 60
m075.pep
MPSYFITLLTMENTKSAAKMPTTIQPASIPSAFAASKAFFAVSGNVAFACAAKARGAAVT
||||||||||||:|||||| |||||||||||||||||||||||||||||||||||||||| a075
MPSYFITLLTMEKTKSAAKTPTTIQPASIPSAFAASKAFFAVSGNVAFACAAKARGAAVT 10 20
30 40 50 60 70 80 90 100 110 120 m075.pep
TASFAPYLRQVLINFMIFSFKKCLAVMDGAFFRRPPNIRKSVFQKSEYDKFVLVADFFQT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a075
TASFAPYLRQVLINFMIFSFKKCLAVMDGAFFRRPPNIRKSVFQKSEYDKFVLVADFFQT 70 80
90 100 110 120 130 m075.pep CVNRFFEVVEIIGIGDX |||||||||||||||||
a075 CVNRFFEVVEIIGIGDX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 241>:
TABLE-US-00402 g080.seq 1 ATGTGGGATA ATGCCGAAGC GATGGAACGG
CTGACGCGCT GGCTGCTTGT 51 CATGATGGCG ATGCTGCTTG CTGCGTCCGG
GCTGGTTTGG TTTTACAATT 101 CGAATCATCT GCCCGTCAAG CAGGTGTCGC
TGAAGGGCAA CCTGGTTTAT 151 TCCGATAAGA AGGCATTGGG CAGTTTGGCG
AAAGAATACA TCCATGGGAA 201 TATTTTGAGG ACGGACATCA ATGGCGCACA
GGAAGCCTAC CGCCGGTATC 251 CGTGGATTGC GTCGGTCATG GTGCGCCGCC
GTTTTCCCGA TACGGTTGAG 301 GTCGTCCTGA CCGAGCGCAA GCCGGTTGCA
CGTTGGGGCG ACCATGCCTT 351 GGTGGACGGC GAAGGCAATG TTTTTGAAGC
CCGCTTGGAC AGACCCGGAA 401 TGCCGGTATT CAGAGGCGCG GAAGGAACGT
CTGCCGAAAT GCTCCGCCGT 451 TATGACGAAT TTTCGACTGT TTTGGCAAAA
CAGGGTTTGG GCATCAAAGA 501 GATGACCTAT ACGGCACGTT CGGCGTGGAA
TGTCGTTTTG GACAACGGCA 551 TCACCGTCAG GCTCGGACGG GAAAAcgaGA
TGAAACGCCT CCgGCTTTTT 601 ACcgAAGCGT GGCAGCATCT gttgcGTAAG
AATAAAAATC GGTTATCCTA 651 TGTGGATATG Aggtataagg acggatttTC
agtcccccat gctCCCGACG 701 GTTTACCCGA AAAAGAATcc gAAGAATatt
gggaacaggt ttgggacata 751 ttacggcctg gcgtcggaaa cggttcgacg
caaatttcaa tcagttatAA 801 GGGCAGacga acaatggaac AGcagtaa
This corresponds to the amino acid sequence <SEQ ID 242; ORF
080.ng>:
TABLE-US-00403 g080.pep 1 MWDNAEAMER LTRWLLVMMA MLLAASGLVW
FYNSNHLPVK QVSLKGNLVY 51 SDKKALGSLA KEYIHGNILR TDINGAQEAY
RRYPWIASVM VRRRFPDTVE 101 VVLTERKPVA RWGDHALVDG EGNVFEARLD
RPGMPVFRGA EGTSAEMLRR 151 YDEFSTVLAK QGLGIKEMTY TARSAWNVVL
DNGITVRLGR ENEMKRLRLF 201 TEAWQHLLRK NKNRLSYVDM RYKDGFSVPH
APDGLPEKES EEYWEQVWDI 251 LRPGVGNGST QISISYKGRR TMEQQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 243>:
TABLE-US-00404 m080.seq 1 ATGTGGGATA ATGCCGAAGC GATGGAACGG
CTGACGCGCT GGCTGCTTGT 51 CATGATGGCG ATGCTGCTTG CTGCGTCCGG
GCTGGTTTGG TTTTACAATT 101 CGAATCATCT GCCCGTCAAG CAGGTGTCGC
TGAAGGGCAA CCTGGTTTAT 151 TCCGATAAGA AGACATTGGG CAGTTTGGCG
AAAGAATACA TCCATGGGAA 201 TATTTTGAGG ACGGACATCA ATGGCGCACA
GGAGGCCTAC CGCCGGTATC 251 CGTGGATTGC GTCGGTCATG GTGCGCCGCC
GTTTTCCCGA CACGGTTGAG 301 GTCGTCCTGA CCGAGCGCAA GCCGGTCGCG
CGTTGGGGCG ACCATGCCTT 351 GGTGGACGGC GAAGGCAATG TTTTTGAAGC
CCGCTTGGAC AGACCCGGAA 401 TGCCGGTATT CAGAGGCGCG GAAGGAACGT
CTGCCGAAAT GCTCCGCCGT 451 TATGACGAAT TTTCGACTGT TTTGGCAAAA
CAGGGTTTGG GCATCAAAGA 501 GATGACCTAT ACGGCACGTT CGGCGTGGAT
TGTCGTTTTG GACAACGGCA 551 TCACCGTCAG GCTCGGACGG GAAAACGAGA
TGAAACGCCT CCGGCTTTTT 601 ACCGAAGCGT GGCAGCATCT GTTGCGTAAA
AATAAAAATC GGTTATCCTA 651 TGTGGATATG AGGTATAAGG ACGGATTTTC
AGTCCGCTAT GCTTCCGACG 701 GTTTACCCGA AAAAGAATCC GAAGAATAG
This corresponds to the amino acid sequence <SEQ ID 2441; ORF
080>:
TABLE-US-00405 m080.pep 1 MWDNAEAMER LTRWLLVMMA MLLAASGLVW
FYNSNHLPVK QVSLKGNLVY 51 SDKKTLGSLA KEYIHGNILR TDINGAQEAY
RRYPWIASVM VRRRFPDTVE 101 VVLTERKPVA RWGDHALVDG EGNVFEARLD
RPGMPVFRGA EGTSAEMLRR 151 YDEFSTVLAK QGLGIKEMTY TARSAWIVVL
DNGITVRLGR ENEMKRLRLF 201 TEAWQHLLRK NKNRLSYVDM RYKDGFSVRY
ASDGLPEKES EE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 080
shows 97.9% identity over a 242 aa overlap with a predicted ORF
(ORF 080.ng) from N. gonorrhoeae:
TABLE-US-00406 m080/g080 10 20 30 40 50 60 m080.pep
MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSLKGNLVYSDKKTLGSLA
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| 080
MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSLKGNLVYSDKKALGSLA 10 20
30 40 50 60 70 80 90 100 110 120 m080.pep
KEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVVLTERKPVARWGDHALVDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 080
KEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVVLTERKPVARWGDHALVDG 70 80
90 100 110 120 130 140 150 160 170 180 m080.pep
EGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAKQGLGIKEMTYTARSAWIVVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 080
EGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAKQGLGIKEMTYTARSAWNVVL 130
140 150 160 170 180 190 200 210 220 230 240 m080.pep
DNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYVDMRYKDGFSVRYASDGLPEKES
|||||||||||||||||||||||||||||||||||||||||||||||| :| |||||||| 080
DNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYVDMRYKDGFSVPHAPDGLPEKES 190
200 210 220 230 240 m080.pep EEX || 080
EEYWEQVWDILRPGVGNGSTQISISYKGRRTMEQQX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 245>:
TABLE-US-00407 a080.seq 1 ATGTGGGATA ATGCCGAAGC GATGGAACGG
CTGACGCGCT GGCTGCTTGT 51 CATGATGGCG ATGCTGCTTG CTGCGTCCGG
GCTGGTTTGG TTTTACAATT 101 CGAATCATCT GCCCGTCAAG CAGGTGTCGC
TGAAGGGCAA CCTAGTTTAT 151 TCCGATAAGA AAGCATTGGG CAGTTTGGCG
AAAGAATACA TCCATGGGAA 201 TATTTTGAGG ACGGACATCA ATGGCGCACA
GGAGGCCTAC CGCCGGTATC 251 CGTGGATTGC GTCGGTCATG GTGCGCCGCC
GTTTTCCCGA CACGGTTGAG 301 GTCGTCCTGA CCGAGCGCAA GCCGGTCGCG
CGTTGGGGCG ACCATGCCTT 351 GGTGGACGGC GAAGGCAATG TTTTTGAAGC
CCGTTTGGAC AGACCCGGAA 401 TGCCGGTATT CAGAGGCGCG GAAGGAACGT
CTGCCGAAAT GCTCCGCCGT 451 TATGACGAAT TTTCGACTGT TTTGGCAAAA
CAGGGTTTGG GCATCAAAGA 501 GATGACCTAT ACGGCACGTT CGGCGTGGAT
TGTCGTTTTG GACAACGGCA 551 TCACCGTCAG GCTCGGACGG GAAAACGAGA
TGAAACGCCT CCGGCTTTTT 601 ACCGAAGCGT GGCAACATCT GTTGCGTAAA
AATAAAAATC GGTTATCCTA 651 TGTGGATATG AGGTATAAGG ACGGATTTTC
AGTCCGCTAT GCTCCCGACG 701 GTTTACCCGA AAAAGAATCC GAAGAATAG
This corresponds to the amino acid sequence <SEQ ID 246; ORF
080.a>:
TABLE-US-00408 a080.pep 1 MWDNAEAMER LTRWLLVMMA MLLAASGLVW
FYNSNHLPVK QVSLKGNLVY 51 SDKKALGSLA KEYIHGNILR TDINGAQEAY
RRYPWIASVM VRRRFPDTVE 101 VVLTERKPVA RWGDHALVDG EGNVFEARLD
RPGMPVFRGA EGTSAEMLRR 151 YDEFSTVLAK QGLGIKEMTY TARSAWIVVL
DNGITVRLGR ENEMKRLRLF 201 TEAWQHLLRK NKNRLSYVDM RYKDGFSVRY
APDGLPEKES EE* m080/a080 99.2% identity over a 242 aa overlap 10 20
30 40 50 60 m080.pep
MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSLKGNLVYSDKKTLGSLA
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a080
MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSLKGNLVYSDKKALGSLA 10 20
30 40 50 60 70 80 90 100 110 120 m080.pep
KEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVVLTERKPVARWGDHALVDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a080
KEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVVLTERKPVARWGDHALVDG 70 80
90 100 110 120 130 140 150 160 170 180 m080.pep
EGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAKQGLGIKEMTYTARSAWIVVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a080
EGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAKQGLGIKEMTYTARSAWIVVL 130
140 150 160 170 180 190 200 210 220 230 240 m080.pep
DNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYVDMRYKDGFSVRYASDGLPEKES
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| a080
DNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYVDMRYKDGFSVRYAPDGLPEKES 190
200 210 220 230 240 m080.pep EEX ||| a080 EEX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 247>:
TABLE-US-00409 g081.seq 1 ATGAAACCAC TGGACCTAAA TTTCATCTGC
CAAGCCCTCA AGCTTCCGAT 51 GCCGTCTGAA AACAAACCCG TGTCGCGCAT
CGTAACCGAC AGCCGCGATA 101 TTCGGGAAGG CGATGTGTTT TTCGCATTGG
CGGGCGGGCG GTTTGACGCG 151 CATGATTTTG TTGGAGGCGT ATTGTCTGCG
GGCGCGGCGG CGGTTGTGGT 201 TTCGCGCGAA GATTGCGCGG CTTTGGGCGG
CGCGTTGAAA GTCGATGACA 251 CGCTTGCCGC GTTGCAAACG TTGGCGAAGG
CGTGGCGCGA TAATGTGAAC 301 CCGTTTGTGT TCGGCATTAC CGGTTCGGGC
GGCAAGACGA CGGTGAAGGA 351 GATGCTGGCT GCGGTATTGC GCCGCCGTTT
CGGCGATGAT GCCGTTTCGG 401 CGACGGCAGG CAACTTCAAC AACCACAtcg
gaTTGCCGCT GACTTTATTG 451 AAATtaaAcg aAAAACACCG CTATGCCGTG
ATTGAAATGG GCATGAACCA 501 TTTTGGcgaa ctggcggtTt taacgcaaaT
CGCCAAACCC GATGCCGCTT 551 TGGtcaACAA CGCCCTGCGC GCCCATGTCG
GATGCGGTTt cgacggagtg 601 GGCGATATTG CCAAAGcgaa aagcGAGATT
TatgcagGct tATGTTCAGA 651 CGGCATGGCA CTGATTCCTC AAGAAGATGC
CAATATGGCT GTCTTCAAAA 701 CGGCAACGTT TAATTTGAAT ACGTGCACTT
TCGGCGTCGA TAGCGGCGAT 751 GTCCGCGCGG AAAATATCGT GCTGAAACCT
TTGTCGTGCG AATTTGATTT 801 GGTGTGCGGC GACGAGCGCA CTGCCGTGGT
GCTGCCTGTT CCCGGCCGCC 851 ACAATGTCCA CAACGCCGCC GCTGCCGCCG
CGCTGGCTTT GGCTGCCGGT 901 TTGAGTTTGA ACGATGTGGC GGAAGGTTTG
CAAGGCTTCA GCAACATCAA 951 AGGCCGTCTG AACGTCAAAG CCGGCATCAA
GGGCGCAACC CTGATTGACG 1001 ATACTTATAA TGCGAATCCC GACAGTATGA
AAGCCGCGGT TGACGTGTTG 1051 GCGCGTATGC CTGCGCCGCG CATTTTCGTG
ATGGGCGATA TGGGCGAACT 1101 GGGCGAGGAc gaAGCCGCCG CCATGCACGC
CGAagtcgGC GCGTACGCCC 1151 GCGACCAAGG CATCGAAGCG GCTTATTTTG
TCGGCGACAA CAGCGTCGAA 1201 GCGGcggaAA AATTTGGCGC GGACGGTTTG
TGGTTCGCCG CCAAAGACCC 1251 GTTGATTCAA GTGTTGAGCC ACGATTTGCC
CGAACGCGCC ACCGTGTTGG 1301 TGAAAGGTTC GCGCTTTATG CAGAtggAAG
AAGTGGTCGA GGCATTGGAG 1351 GATAAGTga
This corresponds to the amino acid sequence <SEQ ID 248; ORF
081.ng>:
TABLE-US-00410 g081.pep 1 MKPLDLNFIC QALKLPMPSE NKPVSRIVTD
SRDIREGDVF FALAGGRFDA 51 HDFVGGVLSA GAAAVVVSRE DCAALGGALK
VDDTLAALQT LAKAWRDNVN 101 PFVFGITGSG GKTTVKEMLA AVLRRRFGDD
AVSATAGNFN NHIGLPLTLL 151 KLNEKHRYAV IEMGMNHFGE LAVLTQIAKP
DAALVNNALR AHVGCGFDGV 201 GDIAKAKSEI YAGLCSDGMA LIPQEDANMA
VFKTATFNLN TCTFGVDSGD 251 VRAENIVLKP LSCEFDLVCG DERTAVVLPV
PGRHNVHNAA AAAALALAAG 301 LSLNDVAEGL QGFSNIKGRL NVKAGIKGAT
LIDDTYNANP DSMKAAVDVL 351 ARMPAPRIFV MGDMGELGED EAAAMHAEVG
AYARDQGIEA AYFVGDNSVE 401 AAEKFGADGL WFAAKDPLIQ VLSHDLPERA
TVLVKGSRFM QMEEVVEALE 451 DK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 249>:
TABLE-US-00411 m081.seq 1 ATGAAACCAC TGGACCTAAA TTTCATCTGC
CAAGCCCTCA AGCTTCCGAT 51 GCCGTCTGAA AGCAAACCCG TGTCGCGCAT
CGTAACCGAC AGCCGCGACA 101 TCCGCGCGGG CGATGTGTTT TTCGCATTGG
CGGGCGAGCG GTTTGACGCG 151 CATGATTTTG TTGAAGACGT ATTGGCTGCT
GGTGCGGCGG CGGTTGTGGT 201 TTCGCGCGAA GATTGTGCTG CAATGGATGG
CGCGTTGAAA GTCGATGACA 251 CGCTTGCCGC ATTGCAAACG CTGGCAAAGG
CGTGGCGTGA AAATGTGAAT 301 CCGTTTGTGT TCGGCATTAC CGGTTCGGGC
GGCAAGACGA CGGTGAAGGA 351 AATGCTGGCT GCGGTATTGC GCCgCCGTTT
CGGCGATGAT GCCGTGTTGG 401 CGACGGCAGG CAACTTCAAC AACCATATCG
GATTGCCGCT GACTTTGTTG 451 AAGTTAAACG AAAAACACCG CTATGCCGTG
ATTGAAATGG GCATGAACCA 501 TTTCGGCGAA CTGGCGGTTT TAACGCAmAT
CGCCAAACCA AATGCCGCAT 551 TGGTCAACAA CGCCATGCGC GCCCATGTCG
GCTGCGGTTT CGACGGAGTG 601 GGCGATATTG CCAAAGCGAA AAGCGAGATT
TACCAAGGTT TATGTTCAGA 651 CGGCATTGCA CTGATTCCTC AAGAAGATGC
CAATATGGCT GTCTTCAAAA 701 CGGCAACGCT TAATTTGAAT ACGCGCACTT
TCGGCATCGA TAGCGGCGAT 751 GTTCACGCGG AAAATATTGT GCTGAAACCG
TTGTCGTGCG AATTTGATTT 801 GGTGTGCGGC GATGAGCGCG CCGCCGTGGT
GCTGCCTGTT CCCGGCCGCC 851 ACAATGTCCA CAACGCCGCC GCTGCCGCCG
CGCTGGCTTT GGCTGCGGGT 901 TTGAGTTTGA ACGATGTGGC GGAAGGTTTG
AAAGGCTTCA GCAATATCAA 951 AGGCCGTCTG AACGTCAAAT CCGGAATCAA
GGGCGCAACC CTGATTGACG 1001 ATACTTATAA TGCGAACCCT GACAGCATGA
AAGCTGCGAT TGACGTGTTG 1051 GCGCGTATGC CTGCGCCGCG TATTTTCGTG
ATGGGCGATA TGGGCGAACT 1101 GGGCGAACTG GGCGAGGACG AAGCCGCCGC
TATGCACGCC GAAGTCGGCG 1151 CGTATGCCCG CGACCAAGGC ATCGAAGCGG
CTTATTTTGT CGGCGACAAC 1201 AGCGTCGAAG CGGCGGAAAA ATTTGGCGCG
GACGGTTTGT GGTTCGCCGC 1251 CAAAGACCCG TTGATTCAAG TGTTGCGCCA
CGATTTGCCC GAACGCGCCA 1301 CCGTGTTGGT GAAAGGTTCG CGCTTTATGC
AGATGGAAGA AGTGGTCGAG 1351 GCATTGGAGG ATAAGTGA
This corresponds to the amino acid sequence <SEQ ID 250; ORF
081>:
TABLE-US-00412 m081.pep 1 MKPLDLNFIC QALKLPMPSE SKPVSRIVTD
SRDIRAGDVF FALAGERFDA 51 HDFVEDVLAA GAAAVVVSRE DCAAMDGALK
VDDTLAALQT LAKAWRENVN 101 PFVFGITGSG GKTTVKEMLA AVLRRRFGDD
AVLATAGNFN NHIGLPLTLL 151 KLNEKHRYAV IEMGMNHFGE LAVLTXIAKP
NAALVNNAMR AHVGCGFDGV 201 GDIAKAKSEI YQGLCSDGIA LIPQEDANMA
VFKTATLNLN TRTFGIDSGD 251 VHAENIVLKP LSCEFDLVCG DERAAVVLPV
PGRHNVHNAA AAAALALAAG 301 LSLNDVAEGL KGFSNIKGRL NVKSGIKGAT
LIDDTYNANP DSMKAAIDVL 351 ARMPAPRIFV MGDMGELGEL GEDEAAAMHA
EVGAYARDQG IEAAYFVGDN 401 SVEAAEKFGA DGLWFAAKDP LIQVLRHDLP
ERATVLVKGS RFMQMEEVVE 451 ALEDK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 081
shows 94.1% identity over a 455 aa overlap with a predicted ORF
(ORF 081.ng) from N. gonorrhoeae:
TABLE-US-00413 m081/g081 10 20 30 40 50 60 m081.pep
MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALAGERFDAHDFVEDVLAA
||||||||||||||||||||:|||||||||||||| ||||||||| |||||||| ||:| g081
MKPLDLNFICQALKLPMPSENKPVSRIVTDSRDIREGDVFFALAGGRFDAHDFVGGVLSA 10 20
30 40 50 60 70 80 90 100 110 120 m081.pep
GAAAVVVSREDCAAMDGALKVDDTLAALQTLAKAWRENVNPFVFGITGSGGKTTVKEMLA
||||||||||||||: ||||||||||||||||||||:||||||||||||||||||||||| g081
GAAAVVVSREDCAALGGALKVDDTLAALQTLAKAWRDNVNPFVFGITGSGGKTTVKEMLA 70 80
90 100 110 120 130 140 150 160 170 180 m081.pep
AVLRRRFGDDAVLATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELAVLTXIAKP
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| g081
AVLRRRFGDDAVSATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELAVLTQIAKP 130
140 150 160 170 180 190 200 210 220 230 240 m081.pep
NAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDGIALIPQEDANMAVFKTATLNLN
:|||||||:|||||||||||||||||||||| ||||||:|||||||||||||||||:||| g081
DAALVNNALRAHVGCGFDGVGDIAKAKSEIYAGLCSDGMALIPQEDANMAVFKTATFNLN 190
200 210 220 230 240 250 260 270 280 290 300 m081.pep
TRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAVVLPVPGRHNVHNAAAAAALALAAG |
|||:|||||:|||||||||||||||||||||:|||||||||||||||||||||||||| g081
TCTFGVDSGDVRAENIVLKPLSCEFDLVCGDERTAVVLPVPGRHNVHNAAAAAALALAAG 250
260 270 280 290 300 310 320 330 340 350 360 m081.pep
LSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDDTYNANPDSMKAAIDVLARMPAPRIFV
||||||||||:||||||||||||:||||||||||||||||||||||:||||||||||||| g081
LSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDDTYNANPDSMKAAVDVLARMPAPRIFV 310
320 330 340 350 360 370 380 390 400 410 420 m081.pep
MGDMGELGELGEDEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAEKFGADGLWFAAKDP
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| g081
MGDMGELGE---DEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAEKFGADGLWFAAKDP 370
380 390 400 410 430 440 450 m081.pep
LIQVLRHDLPERATVLVKGSRFMQMEEVVEALEDKX |||||
|||||||||||||||||||||||||||||| g081
LIQVLSHDLPERATVLVKGSRFMQMEEVVEALEDKX 420 430 440 450
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 251>:
TABLE-US-00414 a081.seq 1 ATGAAACCAC TGGACCTAAA TTTCATCTGC
CAAGCCCTCA AGCTTCCGAT 51 GCCGTCTGAA AGCAAACCCG TGTCGCGCAT
CGTAACCGAC AGCCGCGACA 101 TCCGCGCGGG CGATGTGTTT TTCGCATTGG
CGGGCGGGCG GTTTGATGCG 151 CATGATTTTG TTGAAGACGT ATTGGCTGCG
GGTGCGGCGG CGGTTGTGGT 201 TTCGCGCGAA GATTGCGTTG CAATGGATGG
CGCGTTGAAA GTCGATGACA 251 CGCTTACCGC GTTGCAAATG TTGGCGAAGG
CGTGGCGCGA GAATGTGAAC 301 CCGTTTGTGT TCGGTATTAC CGGCTCGGGC
GGCAAGACGA CGGTGAAGGA 351 AATGTTGGCT GCGGTATTGC GCCGCCGTTT
CGGCGATAAT GCCGTTTTGG 401 CGACGGCAGG CAACTTCAAC AACCACATCG
GATTGCCGTT GACTTTGTTG 451 AAATTAAACG AAAAACACCG CTATGCCGTG
ATTGAAATGG GTATGAACCA 501 TTTTGGCGAA CTGGCGGTTT TGACACAAAT
CGCCAAACCC GATGCCGCAT 551 TGGTCAACAA CGCCATGCGC GCCCATGTCG
GCTGCGGTTT CGACGGAGTG 601 GGCGATATTG CCAAAGCGAA AAGCGAGATT
TATCAAGGCT TATGTTCAGA 651 CGGCATGGCG CTGATTCCTC AAGAAGATGC
CAATATGGCT GTCTTCAAAA 701 CGGCAACGCT TAATTTGAAT ACGCGCACTT
TCGGCATCGA TAGCGGCGAT 751 GTCCACGCGG AAAATATCGT GCTGAAACCG
TTGTCGTGCG AATTTGATTT 801 GGTGTGCGGC AACGAGTGCG CAGCCGTGGT
TCTGCCCGTT CCCGGCCGCC 851 ACAATGTCCA CAACGCCGCC GCCGCCGCCG
CGCTGTCTTT GGCTGCAGGT 901 TTGAGTTTGA ACGATGTGGC GGAAGGTTTG
AAAGGCTTCA GCAATATCAA 951 AGGCCGTCTG AACGTCAAAT CCGGAATCAA
GGGCGCAACC CTGATTGACG 1001 ATACTTATAA TGCGAACCCT GACAGCATGA
AAGCTGCGGT TGACGTGTTG 1051 GCGCGTATGC CTGCGCCGCG TATTTTCGTG
ATGGGCGATA TGGGCGAACT 1101 GGGTGAGGAC GAAGCCGCCG CCATGCACGC
CGAAGTCGGC GCGTACGCCC 1151 GCGACCAAGG CATCGAAGCG GCTTATTTTG
TCGGCGACAA CAGCGTCGAA 1201 GCGGCGGAAA AATTTGGCGC GGACGGTTTG
TGGTTCGCCG CCAAAGACCC 1251 GTTGATTCAA GTGTTGCGCC ACGATTTGCC
CGAACGCGCC ACCGTGTTGG 1301 TGAAAGGTTC GCGCTTTATG CAGATGGAAG
AAGTGGTCGA GGCATTGGAG 1351 GATAAGTGA
This corresponds to the amino acid sequence <SEQ ID 252; ORF
081.a>:
TABLE-US-00415 a081.pep 1 MKPLDLNFIC QALKLPMPSE SKPVSRIVTD
SRDIRAGDVF FALAGGRFDA 51 HDFVEDVLAA GAAAVVVSRE DCVAMDGALK
VDDTLTALQM LAKAWRENVN 101 PFVFGITGSG GKTTVKEMLA AVLRRRFGDN
AVLATAGNFN NHIGLPLTLL 151 KLNEKHRYAV IEMGMNHFGE LAVLTQIAKP
DAALVNNAMR AHVGCGFDGV 201 GDIAKAKSEI YQGLCSDGMA LIPQEDANMA
VFKTATLNLN TRTFGIDSGD 251 VHAENIVLKP LSCEFDLVCG NECAAVVLPV
PGRHNVHNAA AAAALSLAAG 301 LSLNDVAEGL KGFSNIKGRL NVKSGIKGAT
LIDDTYNANP DSMKAAVDVL 351 ARMPAPRIFV MGDMGELGED EAAAMHAEVG
AYARDQGIEA AYFVGDNSVE 401 AAEKFGADGL WFAAKDPLIQ VLRHDLPERA
TVLVKGSRFM QMEEVVEALE 451 DK* m081/a081 96.7% identity over a 455
aa overlap 10 20 30 40 50 60 m081.pep
MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALAGERFDAHDFVEDVLAA
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| a081
MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALAGGRFDAHDFVEDVLAA 10 20
30 40 50 60 70 80 90 100 110 120 m081.pep
GAAAVVVSREDCAAMDGALKVDDTLAALQTLAKAWRENVNPFVFGITGSGGKTTVKEMLA
||||||||||||:||||||||||||:||| |||||||||||||||||||||||||||||| a081
GAAAVVVSREDCVAMDGALKVDDTLTALQMLAKAWRENVNPFVFGITGSGGKTTVKEMLA 70 80
90 100 110 120 130 140 150 160 170 180 m081.pep
AVLRRRFGDDAVLATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELAVLTXIAKP
|||||||||:||||||||||||||||||||||||||||||||||||||||||||| |||| a081
AVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELAVLTQIAKP 130
140 150 160 170 180 190 200 210 220 230 240 m081.pep
NAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDGIALIPQEDANMAVFKTATLNLN
:|||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| a081
DAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDGMALIPQEDANMAVFKTATLNLN 190
200 210 220 230 240 250 260 270 280 290 300 m081.pep
TRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAVVLPVPGRHNVHNAAAAAALALAAG
||||||||||||||||||||||||||||||:| ||||||||||||||||||||||:|||| a081
TRTFGIDSGDVHAENIVLKPLSCEFDLVCGNECAAVVLPVPGRHNVHNAAAAAALSLAAG 250
260 270 280 290 300 310 320 330 340 350 360 m081.pep
LSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDDTYNANPDSMKAAIDVLARMPAPRIFV
||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| a081
LSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDDTYNANPDSMKAAVDVLARMPAPRIFV 310
320 330 340 350 360 370 380 390 400 410 420 m081.pep
MGDMGELGELGEDEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAEKFGADGLWFAAKDP
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a081
MGDMGELGE---DEAAAMHAEVGAYARDQGIEAAYFVGDNSVEAAEKFGADGLWFAAKDP 370
380 390 400 410 430 440 450 m081.pep
LIQVLRHDLPERATVLVKGSRFMQMEEVVEALEDKX
|||||||||||||||||||||||||||||||||||| a081
LIQVLRHDLPERATVLVKGSRFMQMEEVVEALEDKX 420 430 440 450
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 253>:
TABLE-US-00416 g082.seq 1 aTGTGGTTGT TGAAGTTGCC TGCCGTCGCC
GAAACGGCAT CATCGCCGAA 51 ACGGCGGCGC AATACCGCAG CCAGCATCTC
CTTCACCGTC GTCTTGCCGC 101 CCGAACCGGT AATGCCGAAC ACAAACGGGT
TCACATTATC GCGCCACGCC 151 TTCGCCAACG TTTGCAACGC GGCAAGCGTG
TCATCGACTT TCAACGCGCC 201 GCCCAAAGCC GCGCAATCTT CGCGCGAAAC
CACAACCGCC GCCGCGCCCG 251 CAGACAATAC GCCTCCAACA AAATCATGCG
CGTCAAACCG CCCGCCCGCC 301 AATGCGAAAA ACACATCGCC TTCCCGAATA
TCGCGGCTGT CGGTTACGAT 351 GCGCGACACG GGTTTGTTTT CAGACGGCAT
CGGAAGCTTG AGGGCTTGGC 401 AGATGAAATT TAGGTCCAGT GGTTTCATAT
TTGCTTTCGT TAATATTCGG 451 GCGGCGGACA CATCGGTAGC GGCTGATTTT
TTTATCGCCT GTTTTGCTGT 501 GGTAAAACAC AGATTATTTT CCCATTCTCA
TTCGGCATTT TTTCTGTACG 551 TATCATTTTT TAGACGTATT TTTAGCCGAT
TTGCCTTTTC CCGCATACCA 601 CGGCGCGGGG TCGTCGGACT GTCTGTCGAT
AAAGGCAAGG TTATTGCCTT 651 CGCCCGGCAC ATCGGGGACA TTCCCCCAAA
AATCATAGCC GTCATCGGGC 701 AACTCGTCGG TTTCGATACC CGTCCAACTG
CCGAATCCGC GTAA
This corresponds to the amino acid sequence <SEQ ID 254; ORF
082.ng>:
TABLE-US-00417 g082.pep 1 MWLLKLPAVA ETASSPKRRR NTAASISFTV
VLPPEPVMPN TNGFTLSRHA 51 FANVCNAASV SSTFNAPPKA AQSSRETTTA
AAPADNTPPT KSCASNRPPA 101 NAKNTSPSRI SRLSVTMRDT GLFSDGIGSL
RAWQMKFRSS GFIFAFVNIR 151 AADTSVAADF FIACFAVVKH RLFSHSHSAF
FLYVSFFRRI FSRFAFSRIP 201 RRGVVGLSVD KGKVIAFARH IGDIPPKIIA
VIGQLVGFDT RPTAESA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 255>:
TABLE-US-00418 m082.seq 1 ATGnnGTTGT TGAAGTTGCC TGCCGTCGCC
AACACGGCAT CATCGCCGAA 51 ACGGcGGCGC AATACCGCAG CCAGCATTTC
CTTCACCGTC GTCTTGCCGC 101 CCGAACCGGT AATGCCGAAC ACAAACGGAT
TCACATTTTC ACGCCACGCC 151 TTTGCCAGCG TTTGCAATGC GGCAAGCGTG
TCATCGACTT TCAACGCGCC 201 ATCCATTGCA GCACAATCTT CGCGCGAAAC
CACAACCGCC GCCGCACCAG 251 CAGCCAATAC GTCTTCAACA AAATCATGCG
CGTCAAACCG CTCGCCCGCC 301 AATGCGAAAA ACACATCGCC CGCGCGGATG
TCGCGGCTGT CGGTTACGAT 351 GCGCGACACG GGTTTGCTTT CAGACGGCAT
CGGAAGCTTG AGGGCTTGGC 401 AGATGAAATT TAGGTCCAGT GGTTTCATAT
TTACTTTCGT TAATATTCGG 451 GCGGCGGACA CATCGGTAGC GGCTGATTTT
TTTATCGCCT GTTTTGCTGT 501 GGTAAAACAC AGATTATTTT CCCATTCTCA
TTCGGsATTT TTTCTGTACG 551 TATCATTTTT TAGACGTATT TTTAGTCGAT
TTGCCTTTTC CCGCATACCA 601 CGGCGCGGGG TCGTCGGGCA GTCCGTCGAT
AAAGGCAAGG TTATTGCCTT 651 CGCCCTGCAC ATCGGGAACA TTCCCCCAAA
AATCATAGCC GTCATCGGGC 701 AACTCGTCGG TTTCGATACC CGTCCAACTG
CCGAATCCGC GTAA
This corresponds to the amino acid sequence <SEQ ID 256; ORF
082>:
TABLE-US-00419 m082.pep 1 MXLLKLPAVA NTASSPKRRR NTAASISFTV
VLPPEPVMPN TNGFTFSRHA 51 FASVCNAASV SSTFNAPSIA AQSSRETTTA
AAPAANTSST KSCASNRSPA 101 NAKNTSPARM SRLSVTMRDT GLLSDGIGSL
RAWQMKFRSS GFIFTFVNIR 151 AADTSVAADF FIACFAVVKH RLFSHSHSXF
FLYVSFFRRI FSRFAFSRIP 201 RRGVVGQSVD KGKVIAFALH IGNIPPKIIA
VIGQLVGFDT RPTAESA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 082
shows 92.7% identity over a 247 aa overlap with a predicted ORF
(ORF 082.ng) from N. gonorrhoeae:
TABLE-US-00420 m082/g082 10 20 30 40 50 60 m082.pep
MXLLKLPAVANTASSPKRRRNTAASISFTVVLPPEPVMPNTNGFTFSRHAFASVCNAASV |
||||||||:||||||||||||||||||||||||||||||||||:||||||:||||||| g082
MWLLKLPAVAETASSPKRRRNTAASISFTVVLPPEPVMPNTNGFTLSRHAFANVCNAASV 10 20
30 40 50 60 70 80 90 100 110 120 m082.pep
SSTFNAPSIAAQSSRETTTAAAPAANTSSTKSCASNRSPANAKNTSPARMSRLSVTMRDT
||||||| ||||||||||||||| || |||||||| |||||||||:|:|||||||||| g082
SSTFNAPPKAAQSSRETTTAAAPADNTPPTKSCASNRPPANAKNTSPSRISRLSVTMRDT 70 80
90 100 110 120 130 140 150 160 170 180 m082.pep
GLLSDGIGSLRAWQMKFRSSGFIFTFVNIRAADTSVAADFFIACFAVVKHRLFSHSHSXF
||:|||||||||||||||||||||:||||||||||||||||||||||||||||||||| | g082
GLFSDGIGSLRAWQMKFRSSGFIFAFVNIRAADTSVAADFFIACFAVVKHRLFSHSHSAF 130
140 150 160 170 180 190 200 210 220 230 240 m082.pep
FLYVSFFRRIFSRFAFSRIPRRGVVGQSVDKGKVIAFALHIGNIPPKIIAVIGQLVGFDT
|||||||||||||||||||||||||| ||||||||||| |||:||||||||||||||||| g082
FLYVSFFRRIFSRFAFSRIPRRGVVGLSVDKGKVIAFARHIGDIPPKIIAVIGQLVGFDT 190
200 210 220 230 240 m082.pep RPTAESAX |||||||| g082 RPTAESAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 257>:
TABLE-US-00421 a082.seq 1 ATGTGGTTGT TGAAGTTGCC TGCCGTCGCC
AAAACGGCAT TATCGCCGAA 51 ACGGCGGCGC AATACCGCAG CCAACATTTC
CTTCACCGTC GTCTTGCCGC 101 CCGAGCCGGT AATACCGAAC ACAAACGGGT
TCACATTCTC GCGCCACGCC 151 TTCGCCAACA TTTGCAACGC GGTAAGCGTG
TCATCGACTT TCAACGCGCC 201 ATCCATTGCA ACGCAATCTT CGCGCGAAAC
CACAACCGCC GCCGCACCCG 251 CAGCCAATAC GTCTTCAACA AAATCATGCG
CATCAAACCG CCCGCCCGCC 301 AATGCGAAAA ACACATCGCC CGCGCGGATG
TCGCGGCTGT CGGTTACGAT 351 GCGCGACACG GGTTTGCTTT CAGACGGCAT
CGGAAGCTTG AGGGCTTGGC 401 AGATGAAATT TAGGTCCAGT GGTTTCATAT
TTACTTTCGT TAATATTCGG 451 GCGGCGGACA CATCGGTAGC GGCTGATTTT
TTTATCGCCT GTTTTGCTGT 501 GGTAAAACAC AGATTATTTT CCCATTCTCA
TTCGGCATTT TTTCTGTACG 551 TATCATTTTT TAGACGTATT TTTAGTCGAT
TTGCCTTTTC CCGCATACCA 601 CGGCGCGGGG TCGTCGGGCA GTCCGTCGAT
AAAGGCAAGG TTATTGCCTT 651 CGCCCTGCAC ATCGGGAACA TTCCCCCAAA
AATCATAGCC GTCATCGGGC 701 AACTCGTCGG TTTCGATACC CGTCCAACTG
CCGAATCCGC GTAA
This corresponds to the amino acid sequence <SEQ ID 258; ORF
082.a>:
TABLE-US-00422 a082.pep 1 MWLLKLPAVA KTALSPKRRR NTAANISFTV
VLPPEPVIPN TNGFTFSRHA 51 FANICNAVSV SSTFNAPSIA TQSSRETTTA
AAPAANTSST KSCASNRPPA 101 NAKNTSPARM SRLSVTMRDT GLLSDGIGSL
RAWQMKFRSS GFIFTFVNIR 151 AADTSVAADF FIACFAVVKH RLFSHSHSAF
FLYVSFFRRI FSRFAFSRIP 201 RRGVVGQSVD KGKVIAFALH IGNIPPKIIA
VIGQLVGFDT RPTAESA* m082/a082 95.5% identity over a 247 aa overlap
10 20 30 40 50 60 m082.pep
MXLLKLPAVANTASSPKRRRNTAASISFTVVLPPEPVMPNTNGFTFSRHAFASVCNAASV |
||||||||:|| ||||||||||:||||||||||||:||||||||||||||::|||:|| a082
MWLLKLPAVAKTALSPKRRRNTAANISFTVVLPPEPVIPNTNGFTFSRHAFANICNAVSV 10 20
30 40 50 60 70 80 90 100 110 120 m082.pep
SSTFNAPSIAAQSSRETTTAAAPAANTSSTKSCASNRSPANAKNTSPARMSRLSVTMRDT
||||||||||:|||||||||||||||||||||||||| |||||||||||||||||||||| a082
SSTFNAPSIATQSSRETTTAAAPAANTSSTKSCASNRPPANAKNTSPARMSRLSVTMRDT 70 80
90 100 110 120 130 140 150 160 170 180 m082.pep
GLLSDGIGSLRAWQMKFRSSGFIFTFVNIRAADTSVAADFFIACFAVVKHRLFSHSHSXF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | a082
GLLSDGIGSLRAWQMKFRSSGFIFTFVNIRAADTSVAADFFIACFAVVKHRLFSHSHSAF 130
140 150 160 170 180 190 200 210 220 230 240 m082.pep
FLYVSFFRRIFSRFAFSRIPRRGVVGQSVDKGKVIAFALHIGNIPPKIIAVIGQLVGFDT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a082
FLYVSFFRRIFSRFAFSRIPRRGVVGQSVDKGKVIAFALHIGNIPPKIIAVIGQLVGFDT 190
200 210 220 230 240 m082.pep RPTAESAX |||||||| a082 RPTAESAX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 259>:
TABLE-US-00423 g084.seq 1 ATGAAacaAT CCGcccgaat aAAAAATATG
GATCAGACAT TAAAAAATAc 51 attgggcatt tGCGCGcttt tagcctTTTG
TTTTggcgcG gccaTCGCAT 101 CAGGTTATCA CTTGGAATAT GAATACGGCT
ACCGTTATTC TGCCGTGGGC 151 GCTTTGGCTT CGGTTGTATT TTTATTATTA
TTGGCACGCG GCTTCCCGCG 201 CGTTTCTTCA GTTGTTTTAC TGATTTACGT
CGGCACAACC GCCCTATATT 251 TGCCGGTCGG CTGGCTGTAT GGTGCGCCTT
CTTATCAGAT AGTCGGTTCG 301 ATATTGGAAA GCAATCCTGC CGAGGCGCGT
GAATTTGTCG GCAATCTTCC 351 CGGGTCGCTT TATTTTGTGC AGGCATTATT
TTTCATTTTT GGCTTGACAG 401 TTTGGAAATA TTGTGTATCT GTGGGGGTAT
TTGCTGACGT AAAAAACTAT 451 AAACGTCGCA GCAAAATATG GCTGACCATA
TTATTGACTT TGATTTTGTC 501 CTGCGCGGTG ATGGAGAAAA TCGccggcga
taaAGATTGG CGAGaacctg 551 atgccggcct gttgttgaat ATTTTcgacc
tgtattaCga cttggctttc 601 cgcgccggca cAATATGCCG CCAAGCGCGC
CCAcattttg gaagCagcaa 651 aaaaagcgtC AACATGGCAt atccgccaac
ttgcgcccaa gTAtaa
This corresponds to the amino acid sequence <SEQ ID 260; ORF
084.ng>:
TABLE-US-00424 g084.pep 1 MKQSARIKNM DQTLKNTLGI CALLAFCFGA
AIASGYHLEY EYGYRYSAVG 51 ALASVVFLLL LARGFPRVSS VVLLIYVGTT
ALYLPVGWLY GAPSYQIVGS 101 ILESNPAEAR EFVGNLPGSL YFVQALFFIF
GLTVWKYCVS VGVFADVKNY 151 KRRSKIWLTI LLTLILSCAV MEKIAGDKDW
REPDAGLLLN IFDLYYDLAF 201 RAGTICRQAR PHFGSSKKSV NMAYPPTCAQ V*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 261>:
TABLE-US-00425 m084.seq 1 ATGAAACAAT CCGCCcGAAT AAAa.ATATG
AATCAGACAT TACTTTATAC 51 ATTGGGCATT TGCGCGCTTT TAACCTTTnn
nnnnnnnnnn nnnnnnnnnn 101 nnnnnTATCA CCCnGAATAT GAATACGGCT
ACCGTTATTC TGCCGTGGGT 151 GCTTTGGCTT CGGTTGTATT TTTATTATTA
TTGGCACGCG GTTTCCCGCG 201 CGTTTCTTCA GTTGTTTTAC TGATTTACGT
CGGCACAACC GCCCTATATT 251 TGCCGGTCGG CTGGCTGTAT GGTGCGCCGT
CTTATCAGAT AGTCGGTTCG 301 ATATTGGAAA GCAATCCTGC CGAGGCGCGT
GAATTTGTCG GCAATCTTCC 351 CGGGTCGCTT TATTTTGTGC AGGCATTATT
TTTCATTTTT GGCTTGACAG 401 TTTGGAAATA TTGTGTATCG GGGGGGGTAT
TTGCTGACGT AAAAAACTAT 451 AAACGCCGCA GCAAAATATG GCTGACTATA
TTATTGACTT TGATTTTGTC 501 CTGCGCGGTG ATGGATAAAA TCGCCAGCGA
TAAAGATTTG CGAGAACCTG 551 ATGCCGGCCT GTTGTTGAAT ATTTTCGACC
TGTATTACGA TTTGGCT.TC 601 CGCGCCGGCA CAATATGCCG CCAAGCGCGC
CCACATTTTG GAAGCAGCAA 651 AAAAAGCGTC AACATGGCAT ATCCGTCATG
TTGCGCCCAA GTATAA
This corresponds to the amino acid sequence <SEQ ID 262; ORF
084>:
TABLE-US-00426 m084.pep 1 MKQSARIKXM NQTLLYTLGI CALLTFXXXX
XXXXXYHPEY EYGYRYSAVG 51 ALASVVFLLL LARGFPRVSS VVLLIYVGTT
ALYLPVGWLY GAPSYQIVGS 101 ILESNPAEAR EFVGNLPGSL YFVQALFFIF
GLTVWKYCVS GGVFADVKNY 151 KRRSKIWLTI LLTLILSCAV MDKIASDKDL
REPDAGLLLN IFDLYYDLAX 201 RAGTICRQAR PHFGSSKKSV NMAYPSCCAQ V*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 084
shows 90.5% identity over a 231 aa overlap with a predicted ORF
(ORF 084.ng) from N. gonorrhoeae:
TABLE-US-00427 m084/g084 10 20 30 40 50 m084.pep
MKQSARIKXMNQTLLYTLGICALLTF---------YHPEYEYGYRYSAVGALASVVFLLL
|||||||| |:||| ||||||||:| || |||||||||||||||||||||| g084
MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGYRYSAVGALASVVFLLL 10 20
30 40 50 60 60 70 80 90 100 110 m084.pep
LARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSILESNPAEAREFVGNLPGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g084
LARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSILESNPAEAREFVGNLPGSL 70 80
90 100 110 120 120 130 140 150 160 170 m084.pep
YFVQALFFIFGLTVWKYCVSGGVFADVKNYKRRSKIWLTILLTLILSCAVMDKIASDKDL
|||||||||||||||||||| ||||||||||||||||||||||||||||||:|||:||| g084
YFVQALFFIFGLTVWKYCVSVGVFADVKNYKRRSKIWLTILLTLILSCAVMEKIAGDKDW 130
140 150 160 170 180 180 190 200 210 220 m084.pep
REPDAGLLLNIFDLYYDLAXRAGTICRQARPHFGSSKKSVNMAYPSCCAQVX
||||||||||||||||||| ||||||||||||||||||||||||| ||||| g084
REPDAGLLLNIFDLYYDLAFRAGTICRQARPHFGSSKKSVNMAYPPTCAQVX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 263>:
TABLE-US-00428 a084.seq 1 ATGAAACAAT CCGCCCGAAT AAAAAATATG
GATCAGACAT TAAAAAATAC 51 ATTGGGCATT TGCGCGCTTT TAGCCTTTTG
TTTTGGCGCG GCCATCGCAT 101 CAGGTTATCA CTTGGAATAT GAATACGGCT
ACCGTTATTC TGCCGTGGGT 151 GCTTTGGCTT CGGTTGTATT TTTATTATTA
TTGGCACGCG GTTTCCCGCG 201 CGTTTCTTCA GTTGTTTTAC TGATTTACGT
CGGCACAACC GCCCTATATT 251 TGCCGGTCGG CTGGCTGTAT GGTGCGCCGT
CTTATCAGAT AGTCGGTTCG 301 ATATTGGAAA GCAATCCTGC CGAGGCGCGT
GAATTTGTCG GCAATCTTCC 351 CGGGTCGCTT TATTTTGTGC AGGCATTATT
TTTCATTTTT GGCTTGACAG 401 TTTGGAGATA TTGTGTATCG GGGGGGGTAT
TTGCTGACGT AAAAAACTAT 451 AAACGCCGCA GCAAAATATG GCTGACTATA
TTATTGACTT TGATTTTGTC 501 CTGCGCGGTG ATGGATAAAA TCGCCAGCGA
TAAAGATTTG CGAGAACCTG 551 ATGCCGGCCT GTTGTTGAAT ATTTTCGACC
TGTATTACGA TTTGGCTTCC 601 .GCGCCGGCA CAATATGCCG CCAAGCGCGC
CCACATTTTG GAAGCAGCAA 651 AAAAAGCGTC AACATGGCAT ATCCGTCATG
TTGCGCCCAA GTATAA
This corresponds to the amino acid sequence <SEQ ID 264; ORF
084.a>:
TABLE-US-00429 a084.pep 1 MKQSARIKNM DQTLKNTLGI CALLAFCFGA
AIASGYHLEY EYGYRYSAVG 51 ALASVVFLLL LARGFPRVSS VVLLIYVGTT
ALYLPVGWLY GAPSYQIVGS 101 ILESNPAEAR EFVGNLPGSL YFVQALFFIF
GLTVWRYCVS GGVFADVKNY 151 KRRSKIWLTI LLTLILSCAV MDKIASDKDL
REPDAGLLLN IFDLYYDLAS 201 XAGTICRQAR PHFGSSKKSV NMAYPSCCAQ V*
m084/a084 92.2% identity over a 231 aa overlap 10 20 30 40 50 60
m084.pep
MKQSARIKXMNQTLLYTLGICALLTFXXXXXXXXXYHPEYEYGYRYSAVGALASVVFLLL
|||||||| |:||| ||||||||:| || |||||||||||||||||||||| a084
MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGYRYSAVGALASVVFLLL 10 20
30 40 50 60 70 80 90 100 110 120 m084.pep
LARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSILESNPAEAREFVGNLPGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a084
LARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSILESNPAEAREFVGNLPGSL 70 80
90 100 110 120 130 140 150 160 170 180 m084.pep
YFVQALFFIFGLTVWKYCVSGGVFADVKNYKRRSKIWLTILLTLILSCAVMDKIASDKDL
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a084
YFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTILLTLILSCAVMDKIASDKDL 130
140 150 160 170 180 190 200 210 220 230 m084.pep
REPDAGLLLNIFDLYYDLAXRAGTICRQARPHFGSSKKSVNMAYPSCCAQVX
||||||||||||||||||| ||||||||||||||||||||||||||||||| a084
REPDAGLLLNIFDLYYDLASXAGTICRQARPHFGSSKKSVNMAYPSCCAQVX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 265>:
TABLE-US-00430 g085.seq 1 ATGGGCAAAG GGCAGGACTT CACGCCCCTG
CGCGACGCGT TGAAAGATAA 51 GGCAAAAGGC GTGTTCCTGA TCGGCGTCGA
TGCGCCGCAA ATCCGCCGCG 101 ATTTGGACGG CTGCGGCTTG AACCTGACCG
ACTGCGTCAC TTTGGAAGAG 151 GCGGTTCAGA CGGCATACGC CCAAGCCGAA
GCGGGCGATA TTGTCTTGCT 201 CAGCCCCGCC TGCGCGAGTT TCGATATGTT
TAAAGGCTAC GCGCACCGTT 251 CGGAAGTGTT tatCGAAGCG TTTAAGGCTT
TGTGA
This corresponds to the amino acid sequence <SEQ ID 266; ORF
085.ng>:
TABLE-US-00431 g085.pep 1 MGKGQDFTPL RDALKDKAKG VFLIGVDAPQ
IRRDLDGCGL NLTDCVTLEE 51 AVQTAYAQAE AGDIVLLSPA CASFDMFKGY
AHRSEVFIEA FKAL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 267>:
TABLE-US-00432 m085.seq 1 ATGGGTAAAG GGCAGGACTT CACGCCCCTG
CGCGATGCAC TGGTAGGCAA 51 GGCAAAAGGC GTGTTCTTGA TTGGTGTCGA
TGCGCCGCAA ATCCGCCGCG 101 ATTTGGACGG CTGCGGCTTG AATATGACCG
ACTGCGCCAC TTTGGGAGAA 151 GCCGTTCAGA CGGCATATGC CCAAGCCGAA
GCAGGCGATA TTGTGTTGCT 201 CAGCCCCGCC TGCGCGAGCT TTGATATGTT
CAAAGGCTAC GCGCACCGTT 251 CGGAAGTGTT TATCGAAGCG TTTAAGGCTT
TGTGA
This corresponds to the amino acid sequence <SEQ ID 268; ORF
085>:
TABLE-US-00433 m085.pep 1 MGKGQDFTPL RDALVGKAKG VFLIGVDAPQ
IRRDLDGCGL NMTDCATLGE 51 AVQTAYAQAE AGDIVLLSPA CASFDMFKGY
AHRSEVFIEA FKAL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 085
shows 94.7% identity over a 94 aa overlap with a predicted ORF (ORF
085.ng) from N. gonorrhoeae:
TABLE-US-00434 m085/g085 10 20 30 40 50 60 m085.pep
MGKGQDFTPLRDALVGKAKGVFLIGVDAPQIRRDLDGCGLNMTDCATLGEAVQTAYAQAE
|||||||||||||| |||||||||||||||||||||||||:|||:|| ||||||||||| g085
MGKGQDFTPLRDALKDKAKGVFLIGVDAPQIRRDLDGCGLNLTDCVTLEEAVQTAYAQAE 10 20
30 40 50 60 70 80 90 m085.pep AGDIVLLSPACASFDMFKGYAHRSEVFIEAFKALX
||||||||||||||||||||||||||||||||||| g085
AGDIVLLSPACASFDMFKGYAHRSEVFIEAFKALX 70 80 90
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 269>:
TABLE-US-00435 a085.seq 1 ATGGGCAAAG GGCAGGACTT CACGCCCCTG
CGCGACGCGC TTGCCGGCAA 51 GGCAAAAGGC GTGTTCCTGA TCGGTGTCGA
TGCGCCGCAA ATCCGCCGCG 101 ATTTGGACGG CTGCGATCTG AATATGACCG
ACTGCGCCAC TTTGGAAGAA 151 GCGGTTCAGA AGGCATATGC CCAAGCCGAA
GCGGGCGATA TCGTGCTGCT 201 CAGCCCCGCC TGCGCGAGTT TCGATATGTT
TAAAGGCTAC GCGCACCGTT 251 CGGAAGTGTT TATCGGGGCG TTTAAGGCTT
TGTGA
This corresponds to the amino acid sequence <SEQ ID 270; ORF
085.a>:
TABLE-US-00436 a085.pep 1 MGKGQDFTPL RDALAGKAKG VFLIGVDAPQ
IRRDLDGCDL NMTDCATLEE 51 AVQKAYAQAE AGDIVLLSPA CASFDMFKGY
AHRSEVFIGA FKAL* m085/a085 94.7% identity over a 94 aa overlap 10
20 30 40 50 60 m085.pep
MGKGQDFTPLRDALVGKAKGVFLIGVDAPQIRRDLDGCGLNMTDCATLGEAVQTAYAQAE
||||||||||||||:||||||||||||||||||||||| ||||||||| |||| |||||| a085
MGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCDLNMTDCATLEEAVQKAYAQAE 10 20
30 40 50 60 70 80 90 m085.pep AGDIVLLSPACASFDMFKGYAHRSEVFIEAFKALX
|||||||||||||||||||||||||||| |||||| a085
AGDIVLLSPACASFDMFKGYAHRSEVFIGAFKALX 70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 271>:
TABLE-US-00437 g086.seq 1 ATGGTGGTGC TGATGACGGC GTTCGGCCTG
CTGATGATTT ATTCGGCTTC 51 TGTGTATTTG GCATCGAAGG AAGGCGGCGA
TCAGTTTTTC TATTTGACCA 101 GGCAGGCGGG GTTCGTCGTT GCCGGCCTTA
TAGCGAGCGG TTTTTTATGG 151 TTTCTTTGCA GGATGAGGAC ATGGCGGCGG
CTTGTGCCGT GGATTTTTGC 201 CTTATCCGGC CTGTTGCTGG TAGCCGTATT
GATTGCCGGG CGCGAAATCA 251 ATGGCGCGAC CCGTTGGATA CCTTTGGGTC
CGTTGAATTT CCAGCCGACC 301 GAGCTGTTCA AGCTGGCAGT CATCCTTTAT
TTGGCAAGCC TGTTCACGCG 351 CCGTGAAGAA GTGTTGCGCA GCATGGAAAG
TTTGGGTTGG CAGTCGATTT 401 GGCGGGGGAC GGCCAACCTG ATTATGTCCG
CCACCAATCC GCAGGCACGT 451 CGTGAAACAT TAGAAATGTA CGgcCGTTTC
CGGGCGATCA TCCTGCCGAT 501 TATGCTGGTG GCGTTCGGTT TGGTGCTGAT
AATGGTACAG CCGGATTTCG 551 GTTCGTTTGT CGTCATTACC GTCATTACCG
TTGGAATGCT GTTTCTGGCA 601 GGATTGCCGT GGAAATATTT TTTTGTCCTG
GTAGGCAGCG TCTTGGGTGG 651 GATGGTGCTG ATGATTACCG CCGCTCCCTA
CCGTGTGCAG CGGGTAGTGG 701 CATTTTTGGA CCCGTGGAAA GACCCGCAGG
GTGCCGGCTA CCAGCTTACC 751 CACTCTCTGA TGGCAATCGG GCGCGGAGAG
TGGTTCGGTA TGGGTTTGGG 801 TGCGAGTTTG AGCAAACGCG GCTTTCTGCC
GGAAGCGCAT ACCGATTTTA 851 TTTTTGCCAT CATCGCTGAA GAATTCGGCT
TCTTCGGGAT GTGCGTGCTG 901 ATATTCTGTT ACGGCTGGCT GGTGGTGCGG
GCGTTTTCCA TCGGCAAGCA 951 GTCGCGCGAT TTGGGtttgA CTTTCAACGC
CTATATCGCT TCGGGTATCG 1001 GCATTTGGAT CGGTATCCAA AGTTTCTTCA
ATATCGGTGT GAACATCGGT 1051 GCTTTGCCGA CCAAAGGTCT GACGctgCcg
tTGATGTCCT ATGGcggTTC 1101 GTCAGTCTTT TTCATGCTGA TCAGCATGAT
GCTGCTGTTG CGTATCGATT 1151 ATGAAAACCG CCAGAAAATG CGCGGTTACC
GGGTGGAGTA AA
This corresponds to the amino acid sequence <SEQ ID 272; ORF
086.ng>:
TABLE-US-00438 g086.pep 1 MVVLMTAFGL LMIYSASVYL ASKEGGDQFF
YLTRQAGFVV AGLIASGFLW 51 FLCRMRTWRR LVPWIFALSG LLLVAVLIAG
REINGATRWI PLGPLNFQPT 101 ELFKLAVILY LASLFTRREE VLRSMESLGW
QSIWRGTANL IMSATNPQAR 151 RETLEMYGRF RAIILPIMLV AFGLVLIMVQ
PDFGSFVVIT VITVGMLFLA 201 GLPWKYFFVL VGSVLGGMVL MITAAPYRVQ
RVVAFLDPWK DPQGAGYQLT 251 HSLMAIGRGE WFGMGLGASL SKRGFLPEAH
TDFIFAIIAE EFGFFGMCVL 301 IFCYGWLVVR AFSIGKQSRD LGLTFNAYIA
SGIGIWIGIQ SFFNIGVNIG 351 ALPTKGLTLP LMSYGGSSVF FMLISMMLLL
RIDYENRQKM RGYRVE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 273>:
TABLE-US-00439 m086.seq 1 ATGGTGGTGC TGATGACGGC GTTCAGCCTG
CTGATGATTT ATTCGGCTTC 51 TGTGTATTTG GCATCAAAAG AAGGCGGCGA
TCAGTTTTTC TATTTGACCA 101 GACAGGCGGG GTTCGTCGTT GCCGGCTTGA
TAGCGAGCGG TTTGTTATGG 151 TTTCTTTGCA GGATGAGGAC ATGGCGGCGG
CTTGTGCCGT GGATTTTTGC 201 CCTATCCGGC CTGTTGCTGG TAGTCGTATT
GATTGCCGGG CGCGAAATCA 251 ATGGCGCGAC CCGTTGGATA CCTTTGGGTC
CGTTGAATTT CCAGCCGACc 301 GAGCTGTTCA AGCtGGCGGT CATCCTTTAT
TTGGCAAGCC TGTTCACGCG 351 CCGTGAAGAA GTGTTGcGCA GCATGGAAAG
TTTGGGTTGG CAGTCGATTT 401 GGCGGGGGAC GGCCAATCTG ATCATGTCCG
CCACCAATCC GCAGrCACGT 451 CGTGAaACAT TAGAAATGTA CGGCCGTwTC
CGGGCGATCA TCCTGCCGAT 501 TATGCTGGTG GCGTTCGGTT TGGTGCTGAT
AATGGTACAG CCGGATTTCG 551 GTTCGTTTGT CGTCATTACC GTCATTGCCG
TTGGAATGCT GTTTTTGGCA 601 GGATTGCCGT GGAAATATTT TTTCGTCCTG
GTAGGCAGCG TCTTGGGCGG 651 GATGGTGCTG ATGATTACCG CCGCTCCCTA
CCGTGTGCAG CGGGTAGTGG 701 CATTTTTGGA CCCGTGGAAA GACCCGCAGG
GTGCCGGCTA CCAGCTTACC 751 CACTCTCTGA TGGCAATCGG GCGCGGAGAG
TGGTTCGGTA TGGGTTTGGG 801 TGCGAGTTTG AGCAAACGCG GCTTTCTGCC
GGAAGCGCAT ACCGATTTTA 851 TTTTTGCCAT CATCGCCGAA GAATTCGGTT
TCTTCGGTAT GTGCGTGCTG 901 ATATTCTGTT ACGGCTGGCT GGTGGTGCGG
GCGTTTTCCA TCGGCAAGCA 951 GTCGCGCGAT TTGGGTTTGA CTTTCAACGC
CTATATCGCT TCGGGTATCG 1001 GCATTTGGAT CGGkrTCCAA AGTTTCTTCA
ATATCGGTGT GAACATCGGT 1051 GCTTTGCCGA mCAAAgGyCT GACGCyGCCG
Tg.AtGTCCw ATGGCGGTTC 1101 GTCAGTCTTT TTCATGCTGA TCAGCATGAT
GCTGCTGTkG CGTATAGATT 1151 ATGAAAACCG CCGGAAAATG CGCGGTTATC
GGGTGGAGTA A
This corresponds to the amino acid sequence <SEQ ID 274; ORF
086>:
TABLE-US-00440 m086.pep 1 MVVLMTAFSL LMIYSASVYL ASKEGGDQFF
YLTRQAGFVV AGLIASGLLW 51 FLCRMRTWRR LVPWIFALSG LLLVVVLIAG
REINGATRWI PLGPLNFQPT 101 ELFKLAVILY LASLFTRREE VLRSMESLGW
QSIWRGTANL IMSATNPQXR 151 RETLEMYGRX RAIILPIMLV AFGLVLIMVQ
PDFGSFVVIT VIAVGMLFLA 201 GLPWKYFFVL VGSVLGGMVL MITAAPYRVQ
RVVAFLDPWK DPQGAGYQLT 251 HSLMAIGRGE WFGMGLGASL SKRGFLPEAH
TDFIFAIIAE EFGFFGMCVL 301 IFCYGWLVVR AFSIGKQSRD LGLTFNAYIA
SGIGIWIGXQ SFFNIGVNIG 351 ALPXKGLTXP XMSXGGSSVF FMLISMMLLX
RIDYENRRKM RGYRVE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 086
shows 96.7% identity over a 396 aa overlap with a predicted ORF
(ORF 086.ng) from N. gonorrhoeae:
TABLE-US-00441 m086/g086 10 20 30 40 50 60 m086.pep
MVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGLLWFLCRMRTWRR
||||||||:||||||||||||||||||||||||||||||||||||||:|||||||||||| g086
MVVLMTAFGLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRR 10 20
30 40 50 60 70 80 90 100 110 120 m086.pep
LVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREE
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| g086
LVPWIFALSGLLLVAVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREE 70 80
90 100 110 120 130 140 150 160 170 180 m086.pep
VLRSMESLGWQSIWRGTANLIMSATNPQXRRETLEMYGRXRAIILPIMLVAFGLVLIMVQ
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| g086
VLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLIMVQ 130
140 150 160 170 180 190 200 210 220 230 240 m086.pep
PDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWK
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| g086
PDFGSFVVITVITVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWK 190
200 210 220 230 240 250 260 270 280 290 300 m086.pep
DPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g086
DPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVL 250
260 270 280 290 300 310 320 330 340 350 360 m086.pep
IFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGXQSFFNIGVNIGALPXKGLTXP
|||||||||||||||||||||||||||||||||||||| ||||||||||||||:|||| | g086
IFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGALPTKGLTLP 310
320 330 340 350 360 370 380 390 m086.pep
XMSXGGSSVFFMLISMMLLXRIDYENRRKMRGYRVEX || |||||||||||||||
|||||||:||||||||| g086 LMSYGGSSVFFMLISMMLLLRIDYENRQKMRGYRVEX 370
380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 275>:
TABLE-US-00442 a086.seq 1 ATGGTGGTGC TGATGACGGC GTTCAGCCTG
CTGATGATTT ATTCGGCTTC 51 TGTGTATTTG GCATCAAAAG AAGGCGGCGA
TCAGTTTTTC TATTTGACCA 101 GACAGGCGGG GTTCGTCGTT GCCGGCTTGA
TAGCGAGCGG TTTGTTATGG 151 TTTCTTTGCA GGATGAGGAC ATGGCGGCGG
CTTGTGCCGT GGATTTTTGC 201 CCTATCCGGC CTGTTGCTGG TAGTCGTATT
GATTGCCGGG CGCGAAATCA 251 ATGGCGCGAC CCGTTGGATA CCTTTGGGTC
CGTTGAATTT CCAGCCGACC 301 GAGCTGTTCA AGCTGGCGGT CATCCTTTAT
TTGGCAAGCC TGTTCACGCG 351 CCGTGAAGAA GTGTTGCGCA GCATGGAAAG
TTTGGGTTGG CAGTCGATTT 401 GGCGGGGGAC GGCCAATCTG ATCATGTCCG
CCACCAATCC GCAGGCACGT 451 CGTGAAACAT TAGAAATGTA CGGCCGTTTC
CGGGCGATCA TCCTGCCGAT 501 TATGCTGGTG GCGTTCGGTT TGGTGCTGAT
AATGGTACAG CCGGATTTCG 551 GTTCGTTTGT CGTCATTACC GTCATTGCCG
TTGGAATGCT GTTTTTGGCA 601 GGATTGCCGT GGAAATATTT TTTCGTCCTG
GTAGGCAGCG TCTTGGGCGG 651 GATGGTGCTG ATGATTACCG CCGCTCCCTA
CCGTGTGCAG CGGGTAGTGG 701 CATTTTTGGA CCCGTGGAAA GACCCGCAGG
GTGCCGGCTA CCAGCTTACC 751 CACTCTCTGA TGGCAATCGG GCGCGGAGAG
TGGTTCGGTA TGGGTTTGGG 801 TGCGAGTTTG AGCAAACGCG GCTTTCTGCC
GGAAGCGCAT ACCGATTTTA 851 TTTTTGCCAT CATCGCCGAA GAATTCGGTT
TCTTCGGTAT GTGCGTGCTG 901 ATATTCTGTT ACGGCTGGCT GGTGGTGCGG
GCGTTTTCCA TCGGCAAGCA 951 GTCGCGCGAT TTGGGTTTGA CTTTCAACGC
CTATATCGCT TCGGGTATCG 1001 GCATTTGGAT CGGTATCCAA AGTTTCTTCA
ATATCGGTGT GAACATCGGT 1051 GCTTTGCCGA CCAAAGGTCT GACGCTGCCG
TTGATGTCCT ATGGCGGTTC 1101 GTCAGTCTTT TTCATGCTGA TCAGCATGAT
GCTGCTGTTG CGTATAGATT 1151 ATGAAAACCG CCGGAAAATG CGCGGTTACC
GGGTGGAGTA A
This corresponds to the amino acid sequence <SEQ ID 276; ORF
086.a>:
TABLE-US-00443 a086.pep 1 MVVLMTAFSL LMIYSASVYL ASKEGGDQFF
YLTRQAGFVV AGLIASGLLW 51 FLCRMRTWRR LVPWIFALSG LLLVVVLIAG
REINGATRWI PLGPLNFQPT 101 ELFKLAVILY LASLFTRREE VLRSMESLGW
QSIWRGTANL IMSATNPQAR 151 RETLEMYGRF RAIILPIMLV AFGLVLIMVQ
PDFGSFVVIT VIAVGMLFLA 201 GLPWKYFFVL VGSVLGGMVL MITAAPYRVQ
RVVAFLDPWK DPQGAGYQLT 251 HSLMAIGRGE WFGMGLGASL SKRGFLPEAH
TDFIFAIIAE EFGFFGMCVL 301 IFCYGWLVVR AFSIGKQSRD LGLTFNAYIA
SGIGIWIGIQ SFFNIGVNIG 351 ALPTKGLTLP LMSYGGSSVF FMLISMMLLL
RIDYENRRKM RGYRVE* m086/a086 98.0% identity over a 396 aa overlap
10 20 30 40 50 60 m086.pep
MVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGLLWFLCRMRTWRR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a086
MVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGLLWFLCRMRTWRR 10 20
30 40 50 60 70 80 90 100 110 120 m086.pep
LVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a086
LVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREE 70 80
90 100 110 120 130 140 150 160 170 180 m086.pep
VLRSMESLGWQSIWRGTANLIMSATNPQXRRETLEMYGRXRAIILPIMLVAFGLVLIMVQ
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| a086
VLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLIMVQ 130
140 150 160 170 180 190 200 210 220 230 240 m086.pep
PDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a086
PDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWK 190
200 210 220 230 240 250 260 270 280 290 300 m086.pep
DPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a086
DPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVL 250
260 270 280 290 300 310 320 330 340 350 360 m086.pep
IFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGXQSFFNIGVNIGALPXKGLTXP
|||||||||||||||||||||||||||||||||||||| ||||||||||||||:|||| | a086
IFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGALPTKGLTLP 310
320 330 340 350 360 370 380 390 m086.pep
XMSXGGSSVFFMLISMMLLXRIDYENRRKMRGYRVEX || |||||||||||||||
||||||||||||||||| a086 LMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVEX 370
380 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 277>:
TABLE-US-00444 g087.seq 1 ATGGGCGGTA AAACCTTTAT GCTGATGGCG
GGCGGAACGG GCGGACACAT 51 TTTCCCAGCT CTGGCTGTGG CGGATTCATT
GCGCGTGCGC GGTCATCATG 101 TAATTTGGCT GGGCAGCAAG GATTCGATGG
AAGAGCGCAT CGTGCCGCAA 151 TACGGCATAC GCTTGGAAAC GCTGGCGATT
AAAGGAATAC GCGGCAACGG 201 CATCAAACGC AAGCTGATGC TTCCGTTTAC
TCTGTACAAA ACCGTCCGCG 251 AAGCGCAGCG GATTATCCGC AAACACCGTG
TCGAGTGCGT CATCGGCTTC 301 GGCGGTTTTG TTACCTTTCC CGGCGGTCTG
GCGGCGAAAC TCTTGGGCGT 351 GCCGATTGTG ATTCACGAGC AAAACGCCGT
GGCAGGCTTG TCCAACCGCC 401 AccTGTCGCg ctGGGCGAAA CGGGTGTTGT
ACGCTTTTCC GAAAGCGTTC 451 AGCCACGAAG GCGGTTTGGT CGGCAACCCC
GTCCGCGCCG ATATTAGCAA 501 CCTGCCCGTG CCTGCCGAAC GCTTCCAAGG
GCGCGAAGGC CGTCTGAAAA 551 TTTTGGTGGT CGGCGGCAGT TTGGGTGCGG
ACGTTTTGAA CAAAACCGTA 601 CCGCAGGCGT TGGCACTGCT GCCTGAAGAG
GTGCGCCCGC AGATGTACCA 651 CCAGTCGGGG CGTAACAAGC TGGGCAATCT
TCAGGCGGAT TATGACGCGT 701 TGGGCGTGAA AGCGGAATGC GTGGAATTTA
TTACCGACAT GGTGTCCGCC 751 TACCGTGATG CCGATTTGGT GATTTGCCGT
GCCGGCGCGC TGACGATTGC 801 CGAGTTGACG GCGGCGGGGC TGGGCGCGTT
GTTAGTGCCG TATCCTCACG 851 CCGTTGATGA CCATCAAACC GCCAACGCGC
GTTTCATGGT GCAGGCAGAA 901 GCGGGGCTGC TGTTGCCGCA AACCCAGTTG
ACGGCGGAAA AACTCGCCGA 951 AATCCTCGGC AGCCTCAACC GCGAAAAATG
CCTCAAATGG GCGGAAAACG 1001 CCCGTACGTT GGCATTGCCG CACAGCGCGG
ATGACGTTGC CGAAGCCGCG 1051 ATTGCGTGTG CGGCGTAAA
This corresponds to the amino acid sequence <SEQ ID 278; ORF
087.ng>:
TABLE-US-00445 g087.pep 1 MGGKTFMLMA GGTGGHIFPA LAVADSLRVR
GHHVIWLGSK DSMEERIVPQ 51 YGIRLETLAI KGIRGNGIKR KLMLPFTLYK
TVREAQRIIR KHRVECVIGF 101 GGFVTFPGGL AAKLLGVPIV IHEQNAVAGL
SNRHLSRWAK RVLYAFPKAF 151 SHEGGLVGNP VRADISNLPV PAERFQGREG
RLKILVVGGS LGADVLNKTV 201 PQALALLPEE VRPQMYHQSG RNKLGNLQAD
YDALGVKAEC VEFITDMVSA 251 YRDADLVICR AGALTIAELT AAGLGALLVP
YPHAVDDHQT ANARFMVQAE 301 AGLLLPQTQL TAEKLAEILG SLNREKCLKW
AENARTLALP HSADDVAEAA 351 IACAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 279>:
TABLE-US-00446 m087.seq 1 ATGGGCGGTA AAACCTTTAT GCTGAwkkCG
GGCGGAACGG GCGGACATAT 51 TTTCCCCGCG CTGGCGGTGG CGGATTCATT
GCGCGCGCGC GGCCATCATG 101 TGATTTGGCT GGGCAGCAAG GATTCGATGG
AAGAGCGTAT CGTGCCGCAA 151 TACGGCATAC GCTTGGAAAC GCTGGCGATT
AAAGGCGTGC GCGGCAACGG 201 CATCAAACGC AAACTGATGC TGCCGGTTAC
TTTGTATCAA ACCGTCCGCG 251 AAGCGCAGCG GATTATCCGC AAACACCGTG
TCGAGTGCGT CATCGGCTTC 301 GGCGGCTTCG TTACCTTCCC CGGCGGTTTG
GCGGCGAAGC TATTArGCGT 351 GCCGATTGTG ATTCACGAGC AAAACGCCGT
GGCAGGTTTG TCCAACCGCC 401 ACCTGTCGCG CTGGGCGAAG CGGGTGTTGT
ACGCTTTTCC GAAAGCGTTC 451 AGCCACGAAG GCGGCTTGGT CGGCAACCCC
GTCCGCGCCG ATATTAGCAA 501 CCTGCCCGTG CCTGCCGAAC GCTTCCAAGG
GCGTGAAGGC CGTCTGAAAA 551 TTTTGGTGGT CGGCGGCAGT TTGGGCGCGG
ACGTTTTGAA CAAAACCGTA 601 CCGCATGCAT TGGCTTTGCT GCCCGACAAT
GCGCGTCCGC ATATGTACCA 651 CCAATCGGGA CGGGGCAAGC TGGGCATCTT
GCAGGCGnnn nnnnnnnnnn 701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 751 nnnGCGGGAT TGGGTGCGTT GTTAGTGCCG
TATCCTCACG CGGTTGACGA 801 TCACCAAACC GCCAACGCGC GTTTTATGGT
GCAGGCGGAG GCGGGATTGC 851 TGTTGCCGCA AACCCAGTTG ACGGCGGAAA
AACTCGCCGA GATTCTCGGC 901 GGCTTAAACC GCGAAAAATG CCTCAAATGG
GCAGAAAACG CCCGTACGTT 951 GGCACTGCCG CACAGTGCGG ACGACGTGGC
GGAAGCCGCG ATTGCGTGTG 1001 CGGCGTAA
This corresponds to the amino acid sequence <SEQ ID 280; ORF
087>:
TABLE-US-00447 m087.pep 1 MGGKTFMLXX GGTGGHIFPA LAVADSLRAR
GHHVIWLGSK DSMEERIVPQ 51 YGIRLETLAI KGVRGNGIKR KLMLPVTLYQ
TVREAQRIIR KHRVECVIGF 101 GGFVTFPGGL AAKLLXVPIV IHEQNAVAGL
SNRHLSRWAK RVLYAFPKAF 151 SHEGGLVGNP VRADISNLPV PAERFQGREG
RLKILVVGGS LGADVLNKTV 201 PHALALLPDN ARPHMYHQSG RGKLGILQAX
XXXXXXXXXX XXXXXXXXXX 251 XAGLGALLVP YPHAVDDHQT ANARFMVQAE
AGLLLPQTQL TAEKLAEILG 301 GLNREKCLKW AENARTLALP HSADDVAEAA
IACAA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 087
shows 83.9% identity over a 355 aa overlap with a predicted ORF
(ORF 087.ng) from N. gonorrhoeae:
TABLE-US-00448 m087/g087 10 20 30 40 50 60 m087.pep
MGGKTFMLXXGGTGGHIFPALAVADSLRARGHHVIWLGSKDSMEERIVPQYGIRLETLAI
|||||||| ||||||||||||||||||:||||||||||||||||||||||||||||||| g087
MGGKTFMLMAGGTGGHIFPALAVADSLRVRGHHVIWLGSKDSMEERIVPQYGIRLETLAI 10 20
30 40 50 60 70 80 90 100 110 120 m087.pep
KGVRGNGIKRKLMLPVTLYQTVREAQRIIRKHRVECVIGFGGFVTFPGGLAAKLLXVPIV
||:|||||||||||| |||:||||||||||||||||||||||||||||||||||| |||| g087
KGIRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGGFVTFPGGLAAKLLGVPIV 70 80
90 100 110 120 130 140 150 160 170 180 m087.pep
IHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNPVRADISNLPVPAERFQGREG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g087
IHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNPVRADISNLPVPAERFQGREG 130
140 150 160 170 180 190 200 210 220 229 m087.pep
RLKILVVGGSLGADVLNKTVPHALALLPDNARPHMYHQSGRGKLGILQA-----------
|||||||||||||||||||||:||||||:::||:|||||||:||| ||| g087
RLKILVVGGSLGADVLNKTVPQALALLPEEVRPQMYHQSGRNKLGNLQADYDALGVKAEC 190
200 210 220 230 240 230 240 250 m087.pep
-------------------------------AGLGALLVPYPHAVDDHQTANARFMVQAE
||||||||||||||||||||||||||||| g087
VEFITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPHAVDDHQTANARFMVQAE 250
260 270 280 290 300 260 270 280 290 300 310 m087.pep
AGLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDVAEAAIACAAX
||||||||||||||||||||:||||||||||||||||||||||||||||||||||| g087
AGLLLPQTQLTAEKLAEILGSLNREKCLKWAENARTLALPHSADDVAEAAIACAAX 310 320
330 340 350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 281>:
TABLE-US-00449 a087.seq 1 ATGGGCGGTA AAACCTTTAT GCTGATGGCG
GGCGGAACGG GCGGACATAT 51 TTTCCCCGCG CTGGCGGTGG CGGATTCATT
GCGCGCGCGC GGCCATCATG 101 TAATTTGGCT GGGCAGCAAG GATTCGATGG
AAGAGCGCAT CGTGCCGCAA 151 TACGACATCC TGCTCGAAAC GCTGGCGATT
AAAGGCGTGC GCGGCAACGG 201 CATCAAACGC AAGCTGATGC TGCCGTTTAC
TTTGTATCAA ACTGTCCGCG 251 AAGCGCAGCA GATTATCCGC AAACACCGTG
TCGAGTGCGT CATCGGCTTC 301 GGCGGCTTCG TTACCTTTCC CGGCGGTTTG
GCGGCGAAGT TATTAGGCGT 351 GCCGATTGTG ATTCACGAGC AAAACGCCGT
GGCAGGTTTG TCCAACCGCC 401 ACCTGTCGCG CTGGGCGAAG CGGGTGTTGT
ACGCTTTTCC GAAAGCGTTC 451 AGCCACGAAG GCGGCTTGGT CGGCAACCCC
GTCCGCGCCG ATATTAGCAA 501 CCTGCCCGTG CCTGCCGAAC GCTTCCAAGG
GCGTGAAGGC CGTCTGAAAA 551 TTTTGGTGGT CGGCGGCAGT TTGGGCGCGG
ACGTTTTGAA CAAAACCGTA 601 CCGCAGGCAT TGGCTTTGCT GCCCGACAAT
GCGCGTCCGC AGATGTACCA 651 CCAATCGGGA CGGGGCAAGC TGGGCAGCTT
GCAGGCGGAT TACGACGCGC 701 TGGGCGTGCA AGCGGAATGC GTGGAATTTA
TTACCGATAT GGTGTCCGCC 751 TACCGCGATG CCGATTTGGT GATTTGCCGT
GCCGGCGCGC TGACGATTGC 801 CGAGTTGACG GCGGCGGGAT TGGGTGCGTT
GTTAGTGCCG TATCCTCACG 851 CCGTTGATGA CCATCAAACC GCCAACGCGC
GTTTTATGGT GCAGGCGGAG 901 GCGGGATTGC TGTTGCCGCA AACCCAGTTG
ACGGCGGAAA AACTCGCCGA 951 GATTCTCGGC GGCTTAAACC GCGAAAAATG
CCTCAAATGG GCAGAAAACG 1001 CCCGTACGTT GGCACTGCCG CACAGTGCGG
ACGACGTTGC CGAAGCCGCG 1051 ATTGCGTGTG CGGCGTAA
This corresponds to the amino acid sequence <SEQ ID 282; ORF
087.a>:
TABLE-US-00450 a087.pep 1 MGGKTFMLMA GGTGGHIFPA LAVADSLRAR
GHHVIWLGSK DSMEERIVPQ 51 YDILLETLAI KGVRGNGIKR KLMLPFTLYQ
TVREAQQIIR KHRVECVIGF 101 GGFVTFPGGL AAKLLGVPIV IHEQNAVAGL
SNRHLSRWAK RVLYAFPKAF 151 SHEGGLVGNP VRADISNLPV PAERFQGREG
RLKILVVGGS LGADVLNKTV 201 PQALALLPDN ARPQMYHQSG RGKLGSLQAD
YDALGVQAEC VEFITDMVSA 251 YRDADLVICR AGALTIAELT AAGLGALLVP
YPHAVDDHQT ANARFMVQAE 301 AGLLLPQTQL TAEKLAEILG GLNREKCLKW
AENARTLALP HSADDVAEAA 351 IACAA* m087/a087 85.4% identity over a
355 aa overlap 10 20 30 40 50 60 m087.pep
MGGKTFMLXXGGTGGHIFPALAVADSLRARGHHVIWLGSKDSMEERIVPQYGIRLETLAI
|||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| a087
MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSMEERIVPQYDILLETLAI 10 20
30 40 50 60 70 80 90 100 110 120 m087.pep
KGVRGNGIKRKLMLPVTLYQTVREAQRIIRKHRVECVIGFGGFVTFPGGLAAKLLXVPIV
||||||||||||||| ||||||||||:|||||||||||||||||||||||||||| |||| a087
KGVRGNGIKRKLMLPFTLYQTVREAQQIIRKHRVECVIGFGGFVTFPGGLAAKLLGVPIV 70 80
90 100 110 120 130 140 150 160 170 180 m087.pep
IHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNPVRADISNLPVPAERFQGREG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a087
IHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNPVRADISNLPVPAERFQGREG 130
140 150 160 170 180 190 200 210 220 230 240 m087.pep
RLKILVVGGSLGADVLNKTVPHALALLPDNARPHMYHQSGRGKLGILQAXXXXXXXXXXX
|||||||||||||||||||||:|||||||||||:||||||||||| ||| a087
RLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQSGRGKLGSLQADYDALGVQAEC 190
200 210 220 230 240 250 260 270 280 m087.pep
XX--------------------XXXXXXXXXAGLGALLVPYPHAVDDHQTANARFMVQAE : :
||||||||||||||||||||||||||||| a087
VEFITDMVSAYRDADLVICRAGALTIAELTAAGLGALLVPYPHAVDDHQTANARFMVQAE 250
260 270 280 290 300 290 300 310 320 330 m087.pep
AGLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDVAEAAIACAAX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a087
AGLLLPQTQLTAEKLAEILGGLNREKCLKWAENARTLALPHSADDVAEAAIACAAX 310 320
330 340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 283>:
TABLE-US-00451 g088.seq 1 ATGTTTTTAT GGCTCGCACA TTTCAGCAAC
TGGTTAACCG GTCTGAATAT 51 TTTTCAATAC ACCACATTCC GCGCCGTTAT
GGCGGCGTTG ACCGCCTTGG 101 CGTTTTCCCT GATGTTCGGC CCGTGGACGA
TACGCAGGCT GACCGCGCTC 151 AAATGCGGGC AGGCAGTGCG TACCGACGGC
CCGCAAACCC ACCTCGTCAA 201 AAACGGCACG CCGACGATGG GCGGTTCGCT
GATTCTGACC GCCATTACCG 251 TGTCCACCCT GTTGTGGGGC AACTGGGCGA
ACCCGTATAT CTGGATTCTC 301 TTGGGCGTAC TGCTTGCCAC CGGTGCGCTC
GGTTTTTACG ACGACTGGCG 351 CAAAGTCGTT TATAAAGACC CCAACGGCGT
GTCCGCCAAA TTCAAAATGG 401 TGTGGCAGTC AAGCGTTGCC GTTatcgcCG
GTttggcaTT GTTTTACctt 451 gCcgcCAATT CCGCCAACAA TATTTTGATT
GTCCCGtttT TCAAACAAAT 501 CGCCCTGCCG CTGGGCGTGG TCGGCTTttt
gGtgttgTCT TACCTGACCA 551 TCGTCGGCAC ATCCAACGCC GTCAACCTCA
CcgaCGGCTT GGACGGCCTT 601 GCCGCcttcc cgttcgtcct cgttgccgcC
GGGCTCGCCA ttttcgccTA 651 CGTCAGCGGA CACTACCAAT TTTCCCAATA
CCTCCAGCTT CCCTATGTCG 701 CCGGCGCGAA CGAAGTCGCT ATATTCTGCA
CCGCCATGTG CGGCGCGTGC 751 CTCGGATTTT TGTGGTTCAA CGCCTATCCC
GCGCAAGTCT TTATGGGCGA 801 TGTCGGCGCG CTGGCATTGG GTGCCGCGCT
CGGTaccGtt gCCGTcaTcg 851 tCCGCCAAGA ATTTGTcctc gtcattaTGG
GCGGTCTGTT cgtcgtagaa 901 gccgtgTCCG TTATGCTTCa tgtcggCTGG
TACAAGAAAA Ccaaaaaacg 951 CATCTTcCTg acgGcaccga ttcatcacca
ttaCCaactt cgatgCTGGa 1001 aagaaacgca agtcgtcgtc CGTTtCTGGA
TTAtTAccat cgtcgtggtt 1051 tTgataggtt tGagtacccT caAAattcgc
ggaaactatg ccgTCCGAAC 1101 ACCTTTCAGA CGGCATTTGA ACGCGCAATA A
This corresponds to the amino acid sequence <SEQ ID 284; ORF
088.ng>:
TABLE-US-00452 g088.pep 1 MFLWLAHFSN WLTGLNIFQY TTFRAVMAAL
TALAFSLMFG PWTIRRLTAL 51 KCGQAVRTDG PQTHLVKNGT PTMGGSLILT
AITVSTLLWG NWANPYIWIL 101 LGVLLATGAL GFYDDWRKVV YKDPNGVSAK
FKMVWQSSVA VIAGLALFYL 151 AANSANNILI VPFFKQIALP LGVVGFLVLS
YLTIVGTSNA VNLTDGLDGL 201 AAFPFVLVAA GLAIFAYVSG HYQFSQYLQL
PYVAGANEVA IFCTAMCGAC 251 LGFLWFNAYP AQVFMGDVGA LALGAALGTV
AVIVRQEFVL VIMGGLFVVE 301 AVSVMLHVGW YKKTKKRIFL TAPIHHHYQL
RCWKETQVVV RFWIITIVVV 351 LIGLSTLKIR GNYAVRTPFR RHLNAQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 285>:
TABLE-US-00453 m088.seq 1 ATGTTTTTAT GGCTCGCACA TTTCAGCAnC
TGGTTAACCG GTCTGAATnn 51 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 101 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 151 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 251 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 351 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 451 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn 501 nnnnnnnnnn nnnGGCGTGG TCGGCTTTTT
GGTGTTGTCT TACCTGACCA 551 TCGTCGGCAC ATCCAATGCC GTCAACCTCA
CCGACGGCTT GGACGGCCTT 601 GCGACCTTCC CCGTCGTCCT CGTTGCCGCC
GGCCTCGCCA TCTTCGCCTA 651 TGCCAGCGGC CACTCACAAT TTGCCCAATA
CCTGCAATTA CCTTACGTTG 701 CCGGCGCAAA CGAAGTGGTG ATTTTCTGTA
CCGCCATGTG CGGCGCGTGC 751 CTCGGTTTCT TGTGGTTTAA CGCCTATCCC
GCGCAAGTCT TTATGGGCGA 801 TGTCGGTGCA TTGGCATTGG GTGCCGCGCT
CGGTACCGTC GCCGTTATCG 851 TCCGCCAAGA GTTTGTCCTC GTCATTATGG
GCGGATTATT TGTCGTAGAA 901 GCCGTATCCG TTATGCTTCA GGTTGGCTGG
TATAAGAAAA CCAAAAAACG 951 CATCTTCCTG ATGGCGCCCA TCCATCACCA
CTACGAACAA AAAGGCTGGA 1001 AAGAAACCCA AGTCGTCGTC CGCTTTTGGA
TTATTACCAT CGTCTTGGTG 1051 TTGATCGGTT TGAGTACCCT CAAAATCCGC
TGAACCTATG CCGTCTGAAC 1101 ATCTTTCAGA CGGCATTTGA ACGCGCAATA A 1
MFLWLAHFSN WLTGLNIFQY TTFRAVMAAL TALAFSLMFG PWTIRRLTAL 51
KCGQAVRTDG PQTHLVKNGT PTMGGSLILT AITVSTLLWG NWANPYIWIL 101
LGVLLATGAL GFYDDWRKVV YKDPNGVSAK FKMVWQSSVA VIAGLALFYL 151
AANSANNILI VPFFKQIALP LGVVGFLVLS YLTIVGTSNA VNLTDGLDGL 201
AAFPFVLVAA GLAIFAYVSG HYQFSQYLQL PYVAGANEVA IFCTAMCGAC 251
LGFLWFNAYP AQVFMGDVGA LALGAALGTV AVIVRQEFVL VIMGGLFVVE 301
AVSVMLHVGW YKKTKKRIFL TAPIHHHYQL RCWKETQVVV RFWIITIVVV 351
LIGLSTLKIR GNYAVRTPFR RHLNAQ*
This corresponds to the amino acid sequence <SEQ ID 286; ORF
088>:
TABLE-US-00454 m088.pep 1 MFLWLAHFSX WLTGLNXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX 51 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX 101 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX 151 XXXXXXXXXX XXXXXXXXXX XGVVGFLVLS
YLTIVGTSNA VNLTDGLDGL 201 ATFPVVLVAA GLAIFAYASG HSQFAQYLQL
PYVAGANEVV IFCTAMCGAC 251 LGFLWFNAYP AQVFMGDVGA LALGAALGTV
AVIVRQEFVL VIMGGLFVVE 301 AVSVMLQVGW YKKTKKRIFL MAPIHHHYEQ
KGWKETQVVV RFWIITIVLV 351 LIGLSTLKIR XTYAVXTSFR RHLNAQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.Gonorrhoeae ORF 088
shows 91.7% identity over a 205 aa overlap with a predicted ORF
(ORF 088.ng) from N. gonorrhoeae:
TABLE-US-00455 m088/g088 10 20 30 m088.pep
GVVGFLVLSYLTIVGTSNAVNLTDGLDGLA |||||||||||||||||||||||||||||| g088
IAGLALFYLAANSANNILIVPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLA 150
160 170 180 190 200 40 50 60 70 80 90 m088.pep
TFPVVLVAAGLAIFAYASGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPA :||
||||||||||||:||| ||:||||||||||||||:||||||||||||||||||||| g088
AFPFVLVAAGLAIFAYVSGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPA 210
220 230 240 250 260 100 110 120 130 140 150 m088.pep
QVFMGDVGALALGAALGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLM
|||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| g088
QVFMGDVGALALGAALGTVAVIVRQEFVLVIMGGLFVVEAVSVMLHVGWYKKTKKRIFLT 270
280 290 300 310 320 160 170 180 190 200 m088.pep
APIHHHYEQKGWKETQVVVRFWIITIVLVLIGLSTLKIRXTYAVXTSFRRHLNAQX |||||||: :
||||||||||||||||:||||||||||| :||| | ||||||||| g088
APIHHHYQLRCWKETQVVVRFWIITIVVVLIGLSTLKIRGNYAVRTPFRRHLNAQX 330 340
350 360 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 287>:
TABLE-US-00456 a088.seq 1 ATGTTTTTAT GGCTCGCACA TTTCAGCAAC
TGGTTAACCG GTCTGAATAT 51 TTTTCAATAC ACCACATTCC GCGCCGTCAT
GGCGGCGTTG ACCGCCTTGG 101 CGTTTTCCCT GATGTTCGGC CCGTGGACGA
TACGCAGGCT GACCGCGCTC 151 AAATGCGGGC AGGCAGTGCG TACCGACGGT
CCGCAAACCC ACCTCGTCAA 201 AAACGGCACG CCGACGATGG GCGGTTCGCT
GATTCTGACC GCCATTACCG 251 TGTCCACCCT GTTGTGGGGC AACTGGGCAA
ACCCGTATAT CTGGATTCTC 301 TTGGGCGTAT TGCTCGCCAC GGGCGCACTC
GGTTTTTACG ACGACTGGCG 351 CAAAGTCGTC TATAAAGACC CCAACGGCGT
GTCCGCCAAA TTCAAAATGG 401 TGTGGCAGTC AAGCGTTGCC ATTATCGCCG
GTTTGGCATT GTTTTACCTT 451 GCCGCCAATT CCGCCAACAA TATTTTGATT
GTCCCGTTCT TCAAACAAAT 501 CGCCCTGCCG CTGGGCGTGG TCGGCTTTTT
GGTGTTGTCT TACCTGACCA 551 TCGTCGGCAC ATCCAATGCC GTCAACCTCA
CCGACGGCTT GGACGGCCTT 601 GCGACCTTCC CCGTCGTCCT CGTTGCCGCC
GGCCTCGCCA TCTTCGCCTA 651 TGCCAGCGGC CACTCACAAT TTGCCCAATA
CCTGCAATTA CCTTACGTTG 701 CCGGCGCAAA CGAAGTGGTG ATTTTCTGTA
CCGCCATGTG CGGCGCGTGC 751 CTCGGTTTCT TGTGGTTTAA CGCCTATCCC
GCGCAAGTCT TTATGGGCGA 801 TGTCGGTGCA TTGGCATTGG GTGCCGCGCT
CGGTACCGTC GCCGTCATCG 851 TCCGCCAAGA GTTTGTCCTC GTCATTATGG
GCGGATTATT TGTCGTAGAA 901 GCCGTATCCG TTATGCTTCA GGTCGGCTGG
TATAAGAAAA CCAAAAAACG 951 CATCTTCCTG ATGGCGCCCA TCCATCACCA
CTACGAACAA AAAGGCTGGA 1001 AAGAAACCCA AGTCGTCGTC CGCTTTTGGA
TTATTACCAT CGTCTTGGTG 1051 TTGATCGGTT TGAGTACCCT CAAAATCCGC
TGAACCTATG CCGTCTGAAC 1101 ACCTTTCAGA CGGCATTTGA ACGCGCAATA A
This corresponds to the amino acid sequence <SEQ ID 288; ORF
088.a>:
TABLE-US-00457 a088.pep 1 MFLWLAHFSN WLTGLNIFQY TTFRAVMAAL
TALAFSLMFG PWTIRRLTAL 51 KCGQAVRTDG PQTHLVKNGT PTMGGSLILT
AITVSTLLWG NWANPYIWIL 101 LGVLLATGAL GFYDDWRKVV YKDPNGVSAK
FKMVWQSSVA IIAGLALFYL 151 AANSANNILI VPFFKQIALP LGVVGFLVLS
YLTIVGTSNA VNLTDGLDGL 201 ATFPVVLVAA GLAIFAYASG HSQFAQYLQL
PYVAGANEVV IFCTAMCGAC 251 LGFLWFNAYP AQVFMGDVGA LALGAALGTV
AVIVRQEFVL VIMGGLFVVE 301 AVSVMLQVGW YKKTKKRIFL MAPIHHHYEQ
KGWKETQVVV RFWIITIVLV 351 LIGLSTLKIR *TYAV*TPFR RHLNAQ* m088/a088
99.5% identity over a 205 aa overlap 150 160 170 180 190 200
m088.pep
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVGFLVLSYLTIVGTSNAVNLTDGLDGLA
|||||||||||||||||||||||||||||| a088
IAGLALFYLAANSANNILIVPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLA 150
160 170 180 190 200 210 220 230 240 250 260 m088.pep
TFPVVLVAAGLAIFAYASGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a088
TFPVVLVAAGLAIFAYASGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPA 210
220 230 240 250 260 270 280 290 300 310 320 m088.pep
QVFMGDVGALALGAALGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a088
QVFMGDVGALALGAALGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLM 270
280 290 300 310 320 330 340 350 360 370 m088.pep
APIHHHYEQKGWKETQVVVRFWIITIVLVLIGLSTLKIRXTYAVXTSFRRHLNAQX
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| a088
APIHHHYEQKGWKETQVVVRFWIITIVLVLIGLSTLKIRXTYAVXTPFRRHLNAQX 330 340
350 360 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 289>:
TABLE-US-00458 g089.seq 1 ATGCCGCCCA AAATCACGAA GAGCGGGTTT
TGCAAACCGG CAATCGCGGC 51 GGCGGTCGCG CCGACATTCG TGCCTTTGCT
GTCGTCGATG AATACCACGC 101 CGTTTTTCTC GCCGATTTTT TCCACACGGT
GCGGCAAGCC TTGGAAGGTT 151 TTGACGTGTT CCAGCAATGC TTCGCGCGGC
AAACCGACGG CCTCGCACAA 201 AGCCACGGCA GCCATAACGT TGGCGGCGTT
GTGCAAACCT TGCAGCGGGA 251 TGTCTTGCGT AGAAATCAAA TCTTCATTGC
CTTGTTTTAA ACAGCCCGTC 301 CCGCGTTCCA ACCAAAAATC GGCTTCGTGT
TCCAAGGAAA ACCGTTTCAC 351 TTCACGCCCT GCCCGTTTCA TGGCGCGGCA
GAACACGTCG TCCGCATTCA 401 AAACCTGCAC TCCATCGCCA CGGAAAATCT
CGGCTTTGGT ATGCGCGTAG
This corresponds to the amino acid sequence <SEQ ID 290; ORF
089.ng>:
TABLE-US-00459 g089.pep 1 MPPKITKSGF CKPAIAAAVA PTFVPLLSSM
NTTPFFSPIF STRCGKPWKV 51 LTCSSNASRG KPTASHKATA AITLAALCKP
CSGMSCVEIK SSLPCFKQPV 101 PRSNQKSASC SKENRFTSRP ARFMARQNTS
SAFKTCTPSP RKISALVCA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 291>:
TABLE-US-00460 m089.seq 1 ATGCCGCCCA AAATCACkAw GAGCGGATTT
TGCAAACCGG CAATCGCGGC 51 GGCAGTCGCG CCGACATTCG TGCCTTTGCT
GTCGTCGATA AACACCACGC 101 CGTTTTTCTC GCCGATTTTT TCCACGCGGT
GCGGCAGGCC TTGGAAGGTT 151 TTGACGTGTT CGAGCAATGC TTCGCGCGAC
AAACCGATGG CCTCACACAA 201 AGCCACkGCA GCCATGACGT TAGCGGCGTT
GTGCAkACCT TGCAACGGwA 251 TGTCTTGCGT GACAATCAAA TCTTCATTGC
CTTGTTTCAG GCGGCCTGTC 301 TCGCGTTCCA ACCAGAAATC AGCTTCGTGT
TCCAACGAAA ACCATTTTAC 351 CTCGCGCCCG GCACGCTTCA TCGCGCGGCA
GAACGCATCG TCCGCATTCA 401 AAACCTGCAC GCCGTCGCCA CGGAAAATCT
TGGCTTTGGT ATGCGCATAG
This corresponds to the amino acid sequence <SEQ ID 292; ORF
089>:
TABLE-US-00461 m089.pep 1 MPPKITXSGF CKPAIAAAVA PTFVPLLSSI
NTTPFFSPIF STRCGRPWKV 51 LTCSSNASRD KPMASHKATA AMTLAALCXP
CNGMSCVTIK SSLPCFRRPV 101 SRSNQKSASC SNENHFTSRP ARFIARQNAS
SAFKTCTPSP RKILALVCA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 089
shows 88.6% identity over a 149 aa overlap with a predicted ORF
(ORF 089.ng) from N. gonorrhoeae:
TABLE-US-00462 m089/g089 10 20 30 40 50 60 m089.pep
MPPKITXSGFCKPAIAAAVAPTFVPLLSSINTTPFFSPIFSTRCGRPWKVLTCSSNASRD ||||||
||||||||||||||||||||||:|||||||||||||||:||||||||||||| g089
MPPKITKSGFCKPAIAAAVAPTFVPLLSSMNTTPFFSPIFSTRCGKPWKVLTCSSNASRG 10 20
30 40 50 60 70 80 90 100 110 120 m089.pep
KPMASHKATAAMTLAALCXPCNGMSCVTIKSSLPCFRRPVSRSNQKSASCSNENHFTSRP ||
||||||||:|||||| ||:||||| ||||||||::|| ||||||||||:||:||||| g089
KPTASHKATAAITLAALCKPCSGMSCVEIKSSLPCFKQPVPRSNQKSASCSKENRFTSRP 70 80
90 100 110 120 130 140 150 m089.pep ARFIARQNASSAFKTCTPSPRKILALVCAX
|||:||||:|||||||||||||| |||||| g089 ARFMARQNTSSAFKTCTPSPRKISALVCAX
130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 293>:
TABLE-US-00463 a089.seq 1 ATGCCGCCTA AAATCACGAA GAGCGGATTT
TGCAAACCGG CAATCGCGGC 51 GGCGGTCGCA CCGACGTTCG TGCCTTTGCT
GTCGTCGATG AACACCACGC 101 CATTTTTCTC GCCGATTTTT TCCACGCGGT
GCGGCAGGCC TTGAAAGGTT 151 TTGACGTGTT CGAGCAATGC TTCGCGCGGC
AAACCGACGG CTTCGCACAA 201 GGCAACGGCA GCCATCACGT TAGTGGCGTT
GTGCAAGCCT TGCAGCGGAA 251 TATCTTGCGT GGCAATCAAA TCTTCATTGC
CTTGTTTCAG GCGACCTGTC 301 TCACGTTCCA ACCAAAAATC GGCTTCGTAT
TCCAACGAAA ACCATTTCAC 351 CTCGCGCCCG GCGCGCTTCA TCGCACGACA
GAACGCATCG TCCGCATTCA 401 AAACCTGCAC ACCGTCGCCA CGGAAAATCT
TGGCTTTGGT ATGCGCGTAG
This corresponds to the amino acid sequence <SEQ ID 294; ORF
089.a>:
TABLE-US-00464 a089.pep 1 MPPKITKSGF CKPAIAAAVA PTFVPLLSSM
NTTPFFSPIF STRCGRP*KV 51 LTCSSNASRG KPTASHKATA AITLVALCKP
CSGISCVAIK SSLPCFRRPV 101 SRSNQKSASY SNENHFTSRP ARFIARQNAS
SAFKTCTPSP RKILALVCA* m089/a089 91.9% identity over a 149 aa
overlap 10 20 30 40 50 60 m089.pep
MPPKITXSGFCKPAIAAAVAPTFVPLLSSINTTPFFSPIFSTRCGRPWKVLTCSSNASRD ||||||
||||||||||||||||||||||:||||||||||||||||| ||||||||||| a089
MPPKITKSGFCKPAIAAAVAPTFVPLLSSMNTTPFFSPIFSTRCGRPXKVLTCSSNASRG 10 20
30 40 50 60 70 80 90 100 110 120 m089.pep
KPMASHKATAAMTLAALCXPCNGMSCVTIKSSLPCFRRPVSRSNQKSASCSNENHFTSRP ||
||||||||:||:||| ||:|:|||:||||||||||||||||||||| |||||||||| a089
KPTASHKATAAITLVALCKPCSGISCVAIKSSLPCFRRPVSRSNQKSASYSNENHFTSRP 70 80
90 100 110 120 130 140 150 m089.pep ARFIARQNASSAFKTCTPSPRKILALVCAX
|||||||||||||||||||||||||||||| a089 ARFIARQNASSAFKTCTPSPRKILALVCAX
130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 295>:
TABLE-US-00465 g090.seq 1 ATGCGCGTAG TCGAGCAAAT CGTCGTAGCG
GTCGAGATGG TCTTCGGAAA 51 TGTTCATCAC CGTCGCCGCA GTCGGGCGCA
GGCTTTCGGT GTTTTCCAGT 101 TGGAAGCTGG AAAGCTCcca CACCCACACG
TCCGCCTTTT TGCCTTCgcg 151 ctgCAATtct gcctccaaga cgggcgtacc
gatATTGCCC GCAATGAcgg 201 tatccagccc gcacttgatg CAGAGatagc
ggaccaggct ggttaccgTG 251 GTTttgccgt tgctgCcggt aatcgCaatc
accttgtcgC CGCGGCGGtt 301 cAcaaTGTCc gccaGCAATt ggATGTCGCC
TAgCACGCGC .ccgccgTTT 351 TGCttga
This corresponds to the amino acid sequence <SEQ ID 296; ORF
090.ng>:
TABLE-US-00466 g090.pep 1 MRVVEQIVVA VEMVFGNVHH RRRSRAQAFG
VFQLEAGKLP HPHVRLFAFA 51 LQFCLQDGRT DIARNDGIQP ALDAEIADQA
GYRGFAVAAG NRNHLVAAAV 101 HNVRQQLDVA XHAXRRFA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 297>:
TABLE-US-00467 m090.seq 1 ATGCGCATAG TCGAGCAAGT CGTCGTAGCG
GTCGAGATGG TCTTCGGAAA 51 TGTTCAGCAC CGTCGCCGCA GTCGGACGCA
GGCTTTCGGT GTTTTCCAGT 101 TGGAAGCTGG AAAGCTCCAA CACCCACACG
TCCGCCTTTT TGCCTTCGCG 151 CTGCCATTCC GCCTCCAAAA CCGGCGTGCC
GATATTGCCC GCGATAACGG 201 TATCCAGCCC GCACTTGATA CAGAGATAGC
CGACCAGGCT CGTTACCGTG 251 GTTTTGCCGT TGCTGCCGGT AATCGCAATT
ACCTTGTCGT CCCGGCGGTT 301 CACAATGTCC GCCAGCAATT CGATGTCGCC
CAACACGCGT .CCGCCGTTT 351 TGCTTGA
This corresponds to the amino acid sequence <SEQ ID 298; ORF
090>:
TABLE-US-00468 m090.pep 1 MRIVEQVVVA VEMVFGNVQH RRRSRTQAFG
VFQLEAGKLQ HPHVRLFAFA 51 LPFRLQNRRA DIARDNGIQP ALDTEIADQA
RYRGFAVAAG NRNYLVVPAV 101 HNVRQQFDVA QHAXRRFA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 090
shows 83.9% identity over a 118 aa overlap with a predicted ORF
(ORF 090.ng) from N. gonorrhoeae:
TABLE-US-00469 m090/g090 10 20 30 40 50 60 m090.pep
MRIVEQVVVAVEMVFGNVQHRRRSRTQAFGVFQLEAGKLQHPHVRLFAFALPFRLQNRRA
||:|||:|||||||||||:||||||:||||||||||||| ||||||||||| | ||: |: g090
MRVVEQIVVAVEMVFGNVHHRRRSRAQAFGVFQLEAGKLPHPHVRLFAFALQFCLQDGRT 10 20
30 40 50 60 70 80 90 100 110 119 m090.pep
DIARDNGIQPALDTEIADQARYRGFAVAAGNRNYLVVPAVHNVRQQFDVAQHAXRRFAX
||||::|||||||:|||||| |||||||||||||:||: ||||||||:||| |||||||| g090
DIARNDGIQPALDAEIADQAGYRGFAVAAGNRNHLVAAAVHNVRQQLDVAXHAXRRFAX 70 80
90 100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 299>:
TABLE-US-00470 a090.seq 1 ATGCGCGTAG TCGAGCAAGT CGTCGTAGCG
GTCGAGATGG TCTTCGGAAA 51 TGTTCAGCAC TGTCGCCGCA GTCGGGCGCA
GGCTTTCGGT GTTTTCCAGT 101 TGGAAACTGG AAAGCTCCAA CACCCACACG
TCCGCCTTTT TGCCTTCGCG 151 CTGCAATTCC GCCTCCAAAA CCGGCGCGCC
GATATTGCCC GCGATAACGG 201 TATCCAGCCC ACACTTGATG CAGAGATAGC
CGACCAGGCT CGTTACCGTG 251 GTTTTGCCGT TGCTGCCGGT AATCGCAATC
ACCTTGTCGC CGCGGCGGTT 301 CACAATGTCC GCCAGCAATT CGATGTCGCC
CAACACGCGT C.CGCCGTTT 351 CGCTTAA
This corresponds to the amino acid sequence <SEQ ID 300; ORF
090.a>:
TABLE-US-00471 a090.pep 1 MRVVEQVVVA VEMVFGNVQH CRRSRAQAFG
VFQLETGKLQ HPHVRLFAFA 51 LQFRLQNRRA DIARDNGIQP TLDAEIADQA
RYRGFAVAAG NRNHLVAAAV 101 HNVRQQFDVA QHAXRRFA* m09/a090 91.5%
identity over a 117 aa overlap 10 20 30 40 50 60 m090.pep
MRIVEQVVVAVEMVFGNVQHRRRSRTQAFGVFQLEAGKLQHPHVRLFAFALPFRLQNRRA
||:||||||||||||||||| ||||:|||||||||:||||||||||||||| |||||||| a090
MRVVEQVVVAVEMVFGNVQHCRRSRAQAFGVFQLETGKLQHPHVRLFAFALQFRLQNRRA 10 20
30 40 50 60 70 80 90 100 110 119 m090.pep
DIARDNGIQPALDTEIADQARYRGFAVAAGNRNYLVVPAVHNVRQQFDVAQHAXRRFAX
||||||||||:||:|||||||||||||||||||:||: ||||||||||||||||||||| a090
DIARDNGIQPTLDAEIADQARYRGFAVAAGNRNHLVAAAVHNVRQQFDVAQHAXRRFAX 70 80
90 100 110
The following partial DNA sequence was identified in N. gonorrhoeae
g090-1.seq This sequence contains multiple stop codons (not shown)
This corresponds to the amino acid sequence <ORF 090-1.ng>:
g090-1.pep (not shown) The following partial DNA sequence was
identified in N. meningitidis <SEQ ID 2>:
TABLE-US-00472 m090-1.seq 1 ATGACGGCGT TTGCATTTCA GACGGCATCA
CAAAGCCTTA AACGCTTCGA 51 TAAACACTTC CGAACGGTGC GCGTAGCCTT
TGAACATATC AAAGCTCGCG 101 CAGGCGGGGC TGAGCAACAC AATATCGCCT
GCTTCGGCTT GGGCATATGC 151 CGTCTGAACG GCTTCTCCCA AAGTGGCGCA
GTCGGTCATA TTCAAGCCGC 201 AGCCGTCCAA ATCGCGGCGG ATTTGCGGCG
CATCGACACC AATCAAGAAC 251 ACGCCTTTTG CCTTGCCTAC CAGTGCATCG
CGCAGGGGCG TGAAGTCCTG 301 CCCTTTACCC ATGCCGCCCA AAATCACGAA
GAGCGGATTT TGCAAACCGG 351 CAATCGCGGC GGCAGTCGCG CCGACATTCG
TGCCTTTGCT GTCGTCGATA 401 AACACCACGC CGTTTTTCTC GCCGATTTTT
TCCACGCGGT GCGGCAGGCC 451 TTGGAAGGTT TTGACGTGTT CGAGCAATGC
TTCGCGCGAC AAACCGATGG 501 CCTCACACAA AGCCACGGCA GCCATGACGT
TAGCGGCGTT GTGCAGACCT 551 TGCAACGGAA TGTCTTGCGT GACAATCAAA
TCTTCATTGC CTTGTTTCAG 601 GCGGCCTGTC TCGCGTTCCA ACCAGAAATC
AGCTTCGTGT TCCAACGAAA 651 ACCATTTTAC CTCGCGCCCG GCACGCTTCA
TCGCGCGGCA GAACGCATCG 701 TCCGCATTCA AAACCTGCAC GCCGTCGCCA
CGGAAAATCT TGGCTTTGGT 751 ATGCGCATAG TCGAGCAAGT CGTCGTAGCG
GTCGAGATGG TCTTCGGAAA 801 TGTTCAGCAC CGTCGCCGCA GTCGGACGCA
GGCTTTCGGT GTTTTCCAGT 851 TGGAAGCTGG AAAGCTCCAA CACCCACACG
TCCGCCTTTT TGCCTTCGCG 901 CTGCCATTCC GCCTCCAAAA CCGGCGTGCC
GATATTGCCC GCGATAACGG 951 TATCCAGCCC GCACTTGATA CAGAGATAGC
CGACCAGGCT CGTTACCGTG 1001 GTTTTGCCGT TGCTGCCGGT AATCGCAATT
ACCTTGTCGT CCCGGCGGTT 1051 CACAATGTCC GCCAGCAATT CGATGTCGCC
CAACACGCGT CCGCCGTTTT 1101 GCTTGAACGC CTCAATATCC GGCTGCCGCT
CGCTGATGCC GGGACTGAGA 1151 GCCAGAATAT CGAAACCGTT GTCCAGCGCA
TCTTTCAGAC GGCCCGTGTA 1201 AAACACCAAC CCGTCAAACA TCTTACCGAT
TTGCGACACG CGTTCCGGCT 1251 TCAGCTCCGC ATCATACGCA GCAACCTCCG
CGCCGTTTTT GCGCAGGTAG 1301 GCAATCATGG AAATACCCGT ACCGCCGAGT
CCGGCGACGA GGATTTTTTT 1351 GTTTTGAAAA GTCATTTTGG TTTGTCCTAA
This corresponds to the amino acid sequence <SEQ ID 3; ORF
090-1>:
TABLE-US-00473 m090-1.pep 1 MTAFAFQTAS QSLKRFDKHF RTVRVAFEHI
KARAGGAEQH NIACFGLGIC 51 RLNGFSQSGA VGHIQAAAVQ IAADLRRIDT
NQEHAFCLAY QCIAQGREVL 101 PFTHAAQNHE ERILQTGNRG GSRADIRAFA
VVDKHHAVFL ADFFHAVRQA 151 LEGFDVFEQC FARQTDGLTQ SHGSHDVSGV
VQTLQRNVLR DNQIFIALFQ 201 AACLAFQPEI SFVFQRKPFY LAPGTLHRAA
ERIVRIQNLH AVATENLGFG 251 MRIVEQVVVA VEMVFGNVQH RRRSRTQAFG
VFQLEAGKLQ HPHVRLFAFA 301 LPFRLQNRRA DIARDNGIQP ALDTEIADQA
RYRGFAVAAG NRNYLVVPAV 351 HNVRQQFDVA QHASAVLLER LNIRLPLADA
GTESQNIETV VQRIFQTARV 401 KHQPVKHLTD LRHAFRLQLR IIRSNLRAVF
AQVGNHGNTR TAESGDEDFF 451 VLKSHFGLS*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 303>:
TABLE-US-00474 g091.seq 1 ATGGAAATAC CCGTGCCGCC AAGTCCGGCG
ACGAGGATTT TTTTGTTTGA 51 AAGTCATTTT GGTTTTGTCC TAAAACAAAT
CATATTGGGC AGGAGACGTC 101 CGCCCTTGCC CAAGCCGCTT TCAGACGGCA
TCGCGAGCCG ATTAATAACC 151 CGCCTTCAGG CGTTGGTCAT TGTCGCAGCT
GTTTTGGTCT CCGTTTTGAC 201 AAGCCTTGCC AAGCCATTGT TGAGCGAGCG
CAAGGTCTTG GCGCACGCCG 251 CGTCCATCGT AATACATCAA GCCCAAATTG
TATTGGGCTT GGGCATCCCC 301 TTGTTCTGA
This corresponds to the amino acid sequence <SEQ ID 304; ORF
091.ng>:
TABLE-US-00475 g091.pep 1 MEIPVPPSPA TRIFLFESHF GFVLKQIILG
RRRPPLPKPL SDGIASRLIT 51 RLQALVIVAA VLVSVLTSLA KPLLSERKVL
AHAASIVIHQ AQIVLGLGIP 101 LF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 305>:
TABLE-US-00476 m091.seq 1 ATGGAAATAC CCGTACCGCC GAGTCCGGCG
ACGAGGATTT TTTTGTTTGA 51 AAAGTCATTT TGGTTTGTCC TAAAACAAAT
CATATTGAGC AGGAGATGTC 101 CGCCCCTGCC CAAGCCGCTT TCAGACGGCA
TCGCGAGCTG TTCAATAACC 151 CGCCTTCAGG CGTTGGTCAT TGTCGCAGCC
GTCTTGGTCT CCGTTTTGAC 201 AAGCCTTGCC AAACCATTCT TGTGCAAGGG
CGCGGTCTTG GCGCACGCCG 251 CGTCTTTCGG CATACATCAC GCCCAAATTG
TTTTGGGCTT GGGCTACCCC 301 CTGCGC...
This corresponds to the amino acid sequence <SEQ ID 306; ORF
091>:
TABLE-US-00477 m091.pep 1 MEIPVPPSPA TRIFLFEKSF WFVLKQIILS
RRCPPLPKPL SDGIASCSIT 51 RLQALVIVAA VLVSVLTSLA KPFLCKGAVL
AHAASFGIHH AQIVLGLGYP 101 LR.
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 091
shows 84.2% identity over a 101 aa overlap with a predicted ORF
(ORF 091.ng) from N. gonorrhoeae:
TABLE-US-00478 m091/g091 10 20 30 40 50 60 m091.pep
MEIPVPPSPATRIFLFEKSFWFVLKQIILSRRCPPLPKPLSDGIASCSITRLQALVIVAA
|||||||||||||||||: | ||||||||:|| ||||||||||||| |||||||||||| g091
MEIPVPPSPATRIFLFESHFGFVLKQIILGRRRPPLPKPLSDGIASRLITRLQALVIVAA 10 20
30 40 50 60 70 80 90 100 m091.pep
VLVSVLTSLAKPFLCKGAVLAHAASFGIHHAQIVLGLGYPLR ||||||||||||:| :
|||||||: ||:|||||||| || g091
VLVSVLTSLAKPLLSERKVLAHAASIVIHQAQIVLGLGIPLFX 70 80 90 100
The following partial DNA sequence was identified in N.
meningiditis <SEQ ID 307>:
TABLE-US-00479 a091.seq 1 ATGGAAATAC CCGTGCCGCC AAGTCCGGCG
ACGAGGATTT TTTTGTTTTG 51 GAAATCATTT TGGTTTGTCC TAAAACAAAT
CATATTGAGC AGGGGATGTC 101 TGATCCTGCT CAAGCCGCTT TCAGACGGCA
TCGCGAGCTG TTCAATAACC 151 CGCTTTCAGG CGTTGGTCAT TGTCGCAGCT
GTCTTGGTAT CCGTTTTGAC 201 AAGCCTTGCC AAGCCATTCT TGTGCAAGGG
CGCGGTCTTG GCGCACGCCG 251 CGTCTTTCGG CATACATCAC GCCCAAATTG
TTTTGGGC
This corresponds to the amino acid sequence <SEQ ID 308; ORF
091.a>:
TABLE-US-00480 a091.pep 1 MEIPVPPSPA TRIFLFWKSF WFVLKQIILS
RGCLILLKPL SDGIASCSIT 51 RFQALVIVAA VLVSVLTSLA KPFLCKGAVL
AHAASFGIHH AQIVLG m091/a091 93.8% identity over a 96 aa overlap 10
20 30 40 50 60 m091.pep
MEIPVPPSPATRIFLFEKSFWFVLKQIILSRRCPPLPKPLSDGIASCSITRLQALVIVAA
|||||||||||||||| |||||||||||||| | | ||||||||||||||:|||||||| a091
MEIPVPPSPATRIFLFWKSFWFVLKQIILSRGCLILLKPLSDGIASCSITRFQALVIVAA 10 20
30 40 50 60 70 80 90 100 m091.pep
VLVSVLTSLAKPFLCKGAVLAHAASFGIHHAQIVLGLGYPLR
|||||||||||||||||||||||||||||||||||| a091
VLVSVLTSLAKPFLCKGAVLAHAASFGIHHAQIVLG 70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 309>:
TABLE-US-00481 g092.seq 1 ATGTTTTTTA TTTCAATCCG CTATATATTT
GTCAGAAAAC TATGGTGCGC 51 AAACGGTCAG ACCTTTAAAA TAACGCCTTT
ACGCACTAAA AACCAACCGG 101 AACGCAACAT TATGATGAAA AATCGAGTAA
GCAACATCCA TTTTGTCGGT 151 ATCGGCGGCG TCGGCATGAG CGGTATCGCC
GAAGTCTTGC ACAATTTGGG 201 CTTTAAAGTT TCCGGTTCGG ATCAGGCGCG
AAATGCCGCT ACCGAGCATT 251 TGAGCAGCCT GGGCATTCAA GTTTATCCCG
GCCATACCGC AGAACACGTT 301 AACGGTgcgg ATGTCGTCGT TGCCTCTACC
GCCGTCAAGA AAGAAaatcC 351 CGAAGTtgtc gcTGCGTTGG AGCGGCAAAT
TCCCGTTATT CCGCGCGCCT 401 TGATGCTGGC AGAGCTGATG CGCTTCCGTG
ACGgcatcgc cattgccggT 451 ACGCACGGCA AAACCACGAC CACCAGCCTG
ACCGCCTCCA TCCTCGGCGC 501 GGCAGGACTC GACCCCACTT TCGTTATCGG
CGGCAAACTC AACGCCGCAG 551 GCACCAACGC CCGCTTGGGC AAAGGCGAAT
ACATCGTTGC CGAAGCCGAC 601 GAATCCGATG CCTCTTTCCT ACATCTGACC
CCGATTATGT CCGTCGTTAC 651 CAATATCGAC GAAGACCATA TGGATACCTA
CGGGCACAGC GTCGAAAAAC 701 TGCATCAGGC GTTTATCGAT TTCATCCACC
GTATGCCCTT CTACGGCAAA 751 GCCTTTTTGT GTGTTGACAG CGAACACGTC
CGCGCGATTT TGCCCAAAGT 801 GAGCAAACCT TATGCTACTT ACGGTTTGGA
CGATACCGCC GACATCTACG 851 CCACCGACAT CGAAAACGTC GGCGCGCAAA
TGAAATTCAC CGTCCATGTT 901 CAAATGAAAG GACATGAGCA GGGGTCGTTT
GAAGTCGTGC TGAATATGCC 951 CGGCAGACAC AACGTGCTGA ACGCATTGGC
AGCCATCGGc gtggcGCTgg 1001 aagtcGgCGC ATcggttgAA GCGAtcCAAA
AaggCTTGCT CGGCTTTGAA 1051 GGCGTCGGCC GCCGCTTCCA AAAATAcggc
gacatCAagt tgccaaacgg 1101 cggGaccgCT TTgctGGTGG ACGATTAcgg
ACACCACCCC GTCGAAATGG 1151 CGGcaaccct tgccgcTGCA CGCGGCGCGT
ATCCGGAAAA acgtTTGGTG 1201 CtcgCCTTCC AGCCGCACCG CTATACCCGC
ACGCGCGATT TGTTTGAAGA 1251 CTTTACCAAA GTACTCAATA CCGTTGatgC
GCTGGTACTG ACCGAAGTTT 1301 AtgccgccgG CGAAGAGCCG GTTGCCGCCG
CCGactcCCG CGCCTTGGCG 1351 CGTGCTATCC GCGTATTGGG CAAACTTGAG
CCGATTTACT GCGAAAatgt 1401 cgccgACCTG CCGCAAATGC TGATGAATGT
TTTACAGGAT Ggcgatgttg 1451 tgttgAATAT GggTgcggga agcatcaacc
gcgttccttc cgcgctgttg 1501 gaattgtcga AACAGAtttg A
This corresponds to the amino acid sequence <SEQ ID 310; ORF
092.ng>:
TABLE-US-00482 g092.pep 1 MFFISIRYIF VRKLWCANGQ TFKITPLRTK
NQPERNIMMK NRVSNIHFVG 51 IGGVGMSGIA EVLHNLGFKV SGSDQARNAA
TEHLSSLGIQ VYPGHTAEHV 101 NGADVVVAST AVKKENPEVV AALERQIPVI
PRALMLAELM RFRDGIAIAG 151 THGKTTTTSL TASILGAAGL DPTFVIGGKL
NAAGTNARLG KGEYIVAEAD 201 ESDASFLHLT PIMSVVTNID EDHMDTYGHS
VEKLHQAFID FIHRMPFYGK 251 AFLCVDSEHV RAILPKVSKP YATYGLDDTA
DIYATDIENV GAQMKFTVHV 301 QMKGHEQGSF EVVLNMPGRH NVLNALAAIG
VALEVGASVE AIQKGLLGFE 351 GVGRRFQKYG DIKLPNGGTA LLVDDYGHHP
VEMAATLAAA RGAYPEKRLV 401 LAFQPHRYTR TRDLFEDFTK VLNTVDALVL
TEVYAAGEEP VAAADSRALA 451 RAIRVLGKLE PIYCENVADL PQMLMNVLQD
GDVVLNMGAG SINRVPSALL 501 ELSKQI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 311>:
TABLE-US-00483 m092.seq 1 ATGTTTTTTA TTTCAATCCG CTATATATTT
GTCAGAAAAC TATGGCGCGC 51 AAACGGTCAG CCCTTTAAAA TAACGCCTTT
ACGCATCGAA AATCCACCGG 101 AACGCAACAT TATGATGAAA AATCGAGTTA
CCAACATCCA TTTTGTCGGT 151 ATCGGCGGCG TCGGCATGAG CGGCATCGCC
GAAGTCTTGC ACAATTTGGG 201 CTTTAAAGTT TCCGGTTCGG ATCAgGCGCG
AAATGCCGCT ACCGAGCATT 251 TGGGCAGCCT GGGCATTCAA GTTTATCCCG
GCCATACCGC CGAACACGTT 301 AACGGTGCGG ATGTCGTCGT TACCTCTACC
GCCGTCAAAA AAGAAAATCC 351 CGAAGTTGTC GCTGCGTTGG AGCAGCAAAT
TCCCGTTATT CCGCGCGCCC 401 TGATGTTGGC GGAGTTGATG CGCTTCCGTG
ACGGCATCGC CATTGCCGGC 451 ACGCACGGCA AAACCACGAC CACCAGCCTG
ACCGCCTCCA TCCTCGGCGC 501 GGCAGGACTT GACCCGACTT TCGTTATCGG
CGGCAAACTC AACGCCGCAG 551 GCACTAACGC CCGCTTGGGC AAAGGCGAAT
ACATCGTTGC CGAAGCCGAC 601 GAGTCGGATG CATCCTTTCT GCACCTGACA
CCGATTATGT CCGTCGTTAC 651 CAATATCGAC GAAGACCATA TGGATACCTA
CGGGCACAGC GTCGAAAAAC 701 TGCATCAGGC GTTTATCGAT TTCATCCACC
GTATGCCCTT CTACGGCAAA 751 GCCTTTTTGT GTATTGACAG CGAACACGTC
CGCGCGATTT TGCCCAAAGT 801 GAGCAAACCT TATGCTACTT ACGGTTTGGA
CGATACCGCC GACATCTACG 851 CCACCGACAT CGAAAACGTC GGCGCGCAAA
TGAAATTCAC CGTCCATGTT 901 CAAATGAAAG GACATGAGCA GGGGTCGTTT
GAAGTCGTGC TGAATATGCC 951 CGGCAGACAC AACGTGCTGA ACGCATTGGC
AGCCATCGGC GTGGCGCTGG 1001 AAGTCGGCGC ATCGGTTGAA GCGATCCAAA
AAGGCTTGCT CGGCTTTGAA 1051 GGCGTCGGCC GCCGCTTCCA AAAATACGGC
GACATCAAGT TGCCAAACGG 1101 CGGGACCGCG CTCTTGGTGG ACGACTACGG
ACACCACCCC GTCGAAATGG 1151 CGGCGACCCT TGCCGCCGCA CGCGGCGCGT
ATCTGGAAAA ACGTTTGGTA 1201 CTCGCCTTCC AGCCGCACCG CTATACCCGC
ACGCGCGATT TGTTTGAAGA 1251 CTTTACCAAA GTCCTCAATA CCGTTGACGC
GCTGGTGCTG ACCGAAGTTT 1301 ATGCCGCCGG TGAAGAGCCG ATTGCCGCCG
CCGATTCCCG CGCTCTTGCC 1351 CGCGCCATCC GCGTGTTGGG CAAACTCGAG
CCGATTTACT GCGAAAACGT 1401 TGCCGATCTG CCCGAAATGC TGTTGAACGT
TTTGCAGGAC GGCGACATCG 1451 TGTTGAATAT GGGCGCGGGA AGCATCAACC
GCGTCCCCGC CGCGCTGCTG 1501 GCATTGTCGA AACAGATTTG A
This corresponds to the amino acid sequence <SEQ ID 312; ORF
092>:
TABLE-US-00484 m092.pep 1 MFFISIRYIF VRKLWRANGQ PFKITPLRIE
NPPERNIMMK NRVTNIHFVG 51 IGGVGMSGIA EVLHNLGFKV SGSDQARNAA
TEHLGSLGIQ VYPGHTAEHV 101 NGADVVVTST AVKKENPEVV AALEQQIPVI
PRALMLAELM RFRDGIAIAG 151 THGKTTTTSL TASILGAAGL DPTFVIGGKL
NAAGTNARLG KGEYIVAEAD 201 ESDASFLHLT PIMSVVTNID EDHMDTYGHS
VEKLHQAFID FIHRMPFYGK 251 AFLCIDSEHV RAILPKVSKP YATYGLDDTA
DIYATDIENV GAQMKFTVHV 301 QMKGHEQGSF EVVLNMPGRH NVLNALAAIG
VALEVGASVE AIQKGLLGFE 351 GVGRRFQKYG DIKLPNGGTA LLVDDYGHHP
VEMAATLAAA RGAYLEKRLV 401 LAFQPHRYTR TRDLFEDFTK VLNTVDALVL
TEVYAAGEEP IAAADSRALA 451 RAIRVLGKLE PIYCENVADL PEMLLNVLQD
GDIVLNMGAG SINRVPAALL 501 ALSKQI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 092
shows 96.6% identity over a 506 aa overlap with a predicted ORF
(ORF 092.ng) from N. gonorrhoeae:
TABLE-US-00485 m092/g092 10 20 30 40 50 60 m092.pep
MFFISIRYIFVRKLWRANGQPFKITPLRIENPPERNIMMKNRVTNIHFVGIGGVGMSGIA
||||||||||||||| |||| ||||||| :| |||||||||||:|||||||||||||||| g092
MFFISIRYIFVRKLWCANGQTFKITPLRTKNQPERNIMMKNRVSNIHFVGIGGVGMSGIA 10 20
30 40 50 60 70 80 90 100 110 120 m092.pep
EVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAEHVNGADVVVTSTVKKENPEVV
||||||||||||||||||||||||:||||||||||||||||||||||:|||||||||||| g092
EVLHNLGFKVSGSDQARNAATEHLSSLGIQVYPGHTAEHVNGADVVVASTAVKKENPEVV 70 80
90 100 110 120 130 140 150 160 170 180 m092.pep
AALEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| g092
AALERQIPVIPRALMLAELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL 130
140 150 160 170 180 190 200 210 220 230 240 m092.pep
NAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g092
NAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFID 190
200 210 220 230 240 250 260 270 280 290 300 m092.pep
FIHRMPFYGKAFLCIDSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHV
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| g092
FIHRMPFYGKAFLCVDSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHV 250
260 270 280 290 300 310 320 330 340 350 360 m092.pep
QMKGHEQGSFEVVLNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g092
QMKGHEQGSFEVVLNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYG 310
320 330 340 350 360 370 380 390 400 410 420 m092.pep
DIKLPNGGTALLVDDYGHHPVEMAATLAAARGAYLEKRLVLAFQPHRYTRTRDLFEDFTK
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| g092
DIKLPNGGTALLVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTK 370
380 390 400 410 420 430 440 450 460 470 480 m092.pep
VLNTVDALVLTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQD
||||||||||||||||||||:||||||||||||||||||||||||||||||:||:||||| g092
VLNTVDALVLTEVYAAGEEPVAAADSRALARAIRVLGKLEPIYCENVADLPQMLMNVLQD 430
440 450 460 470 480 490 500 m092.pep GDIVLNMGAGSINRVPAALLALSKQIX
||:|||||||||||||:||| |||||| g092 GDVVLNMGAGSINRVPSALLELSKQIX 490
500
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 313>:
TABLE-US-00486 a092.seq 1 ATGTTTTTTA TTTCAATCCG CTATATATTT
GTCAGAAAAC TATGGCGCGC 51 AAACGGTCAG CCCTTTAAAA TAACGCCTTT
ACGCATCGAA AATCCACCGG 101 AACGCAACAT TATGATGAAA AATCGAGTGA
CCAACATCCA TTTTGTCGGT 151 ATCGGCGGCG TCGGCATGAG CGGTATCGCC
GAAGTCTTGC ACAATTTGGG 201 TTTTAAAGTT TCCGGTTCGG ATCAGGCGCG
AAATGCCGCT ACCGAGCATT 251 TGGGCAGCCT GGGCATTCAA GTTTATCCCG
GCCATACCGC AGAACACGTT 301 AACGGTGCGG ATGTCGTCGT TACCTCTACC
GCCGTCAAAA AAGAAAATCC 351 CGAAGTTGTC GCTGCGTTGG AGCAGCAAAT
TCCCGTTATT CCGCGCGCCC 401 TGATGTTGGC GGAGTTGATG CGCTTCCGTG
ACGGCATCGC CATTGCCGGC 451 ACGCACGGCA AAACCACGAC CACCAGCCTG
ACCGCCTCCA TCCTCGGCGC 501 GGCAGGACTT GACCCGACTT TCGTTATCGG
CGGCAAACTC AACGCCGCAG 551 GCACCAACGC CCGCTTGGGC AAAGGCGAAT
ACATCGTTGC CGAAGCCGAC 601 GAGTCGGATG CATCCTTTCT GCACCTGACA
CCGATTATGT CCGTCGTTAC 651 CAATATCGAC GAAGACCATA TGGATACCTA
CGGGCACAGT GTTGAGAAGC 701 TGCATCAGGC GTTTATCGAT TTCATCCACC
GTATGCCCTT CTACGGCAAA 751 GCCTTTTTGT GTATTGACAG CGAACACGTC
CGCGCGATTT TGCCCAAAGT 801 GAGCAAACCT TATGCTACTT ACGGTTTGGA
CGATACCGCC GACATCTACG 851 CCACCGACAT CGAAAACGTC GGCGCGCAAA
TGAAATTCAC CGTCCATGTT 901 CAAATGAAAG GACATGAGCA GGGGTCGTTT
GAAGTCGTGC TGAATATGCC 951 CGGCAGACAC AACGTGCTGA ACGCATTGGC
AGCCATCGGC GTGGCGCTGG 1001 AAGTCGGCGC ATCGGTTGAA GCGATCCAAA
AAGGCTTGCT CGGCTTTGAA 1051 GGTGTCGGCC GCCGCTTCCA AAAATACGGC
GACATCAAGT TGCCAAACGG 1101 TGGAACCGCG CTCTTGGTGG ACGACTACGG
ACACCACCCC GTCGAAATGG 1151 CGGCGACCCT TTCCGCCGCA CGCGGCGCGT
ATCCGGAAAA ACGTTTGGTA 1201 CTCGCCTTCC AGCCGCACCG CTATACCCGC
ACGCGCGATT TGTTTGAAGA 1251 CTTTACCAAA GTCCTCAATA CCGTTGACGC
GCTGGTGCTG ACCGAAGTTT 1301 ATGCCGCCGG TGAAGAGCCG ATTGCCGCCG
CTGATTCCCG CGCTCTTGCC 1351 CGCGCCATCC GCGTGTTGGG CAAACTCGAG
CCGATTTACT GCGAAAACGT 1401 TGCCGATCTG CCCGAAATGC TGTTGAACGT
TTTGCAGGAC GGCGACATCG 1451 TGTTGAATAT GGGTGCGGGA AGCATCAACC
GCGTCCCCGC CGCGCTGCTG 1501 GAATTGTCGA AACAGATTTG A
This corresponds to the amino acid sequence <SEQ ID 314; ORF
092.a>:
TABLE-US-00487 a092.pep 1 MFFISIRYIF VRKLWRANGQ PFKITPLRIE
NPPERNIMMK NRVTNIHFVG 51 IGGVGMSGIA EVLHNLGFKV SGSDQARNAA
TEHLGSLGIQ VYPGHTAEHV 101 NGADVVVTST AVKKENPEVV AALEQQIPVI
PRALMLAELM RFRDGIAIAG 151 THGKTTTTSL TASILGAAGL DPTFVIGGKL
NAAGTNARLG KGEYIVAEAD 201 ESDASFLHLT PIMSVVTNID EDHMDTYGHS
VEKLHQAFID FIHRMPFYGK 251 AFLCIDSEHV RAILPKVSKP YATYGLDDTA
DIYATDIENV GAQMKFTVHV 301 QMKGHEQGSF EVVLNMPGRH NVLNALAAIG
VALEVGASVE AIQKGLLGFE 351 GVGRRFQKYG DIKLPNGGTA LLVDDYGHHP
VEMAATLSAA RGAYPEKRLV 401 LAFQPHRYTR TRDLFEDFTK VLNTVDALVL
TEVYAAGEEP IAAADSRALA 451 RAIRVLGKLE PIYCENVADL PEMLLNVLQD
GDIVLNMGAG SINRVPAALL 501 ELSKQI* m092/a092 99.4% identity over a
506 aa overlap 10 20 30 40 50 60 m092.pep
MFFISIRYIFVRKLWRANGQPFKITPLRIENPPERNIMMKNRVTNIHFVGIGGVGMSGIA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
MFFISIRYIFVRKLWRANGQPFKITPLRIENPPERNIMMKNRVTNIHFVGIGGVGMSGIA 10 20
30 40 50 60 70 80 90 100 110 120 m092.pep
EVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
EVLHNLGFKVSGSDQARNAATEHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVV 70 80
90 100 110 120 130 140 150 160 170 180 m092.pep
AALEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
AALEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKL 130
140 150 160 170 180 190 200 210 220 230 240 m092.pep
NAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
NAAGTNARLGKGEYIVAEADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFID 190
200 210 220 230 240 250 260 270 280 290 300 m092.pep
FIHRMPFYGKAFLCIDSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
FIHRMPFYGKAFLCIDSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHV 250
260 270 280 290 300 310 320 330 340 350 360 m092.pep
QMKGHEQGSFEVVLNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
QMKGHEQGSFEVVLNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYG 310
320 330 340 350 360 370 380 390 400 410 420 m092.pep
DIKLPNGGTALLVDDYGHHPVEMAATLAAARGAYLEKRLVLAFQPHRYTRTRDLFEDFTK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
DIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTK 370
380 390 400 410 420 430 440 450 460 470 480 m092.pep
VLNTVDALVLTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a092
VLNTVDALVLTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQD 430
440 450 460 470 480 490 500 m092.pep GDIVLNMGAGSINRVPAALLALSKQIX
|||||||||||||||||||| |||||| a092 GDIVLNMGAGSINRVPAALLELSKQIX 490
500
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 315>:
TABLE-US-00488 g093.seq 1 aTGCAGAATt ttgGCAAAGT ggccgtATTG
ATGGGtggtT TTTCCAGCGA 51 ACGAGAaatc tcgcTGGACA GCgGTACCGC
CATTTTGAAC GCCTTAAAAA 101 GCAAAGGCAT AGACGCATAC GCCTTCGACC
CTAAGGAAAC GCCGTTATCC 151 GAACTGAAGG AGCGGGGCTT TCAGACGGCA
TTCAACATCC TTCACGGTAC 201 TTACGGCGAA GACGGGGCTG TTCAGGGTGC
ATTGGAACTG TTGGGCATTC 251 CCTATACCGG CAGCGGTGTC GCCGCCTCCG
CCATCGGCAT GGACAAATAC 301 CGCTGCAAAC TGATTTGGCA GGCATTGGGA
TTACCCGTTC CCGAGTTCGC 351 CGTACTGTAC GATGATACCG ATTTCGATGC
CGTCGAAGAA AAATTGGGTC 401 TGCCGATGTT TGTGAAGCCG GCGGCCGAAG
GCAGCAGCgt cggcgtggta 451 aAAGTCAAAG AAAaaggccg TCTGAAAAGC
GTTtacgaag aatTGAaaCA 501 CCTTcagggg cgaAAtcatt gccgAacgTT
TTATCGGCGG CGGCGAATAT 551 TCCTGCCCCG TCCTGAACGG CAAAGGGCTG
CCCGGCATAC ACATCATCCC 601 CGCAACCGAG TTTTACGAct acgaagccaa
GtacaaCCGA GACGAcacca 651 tttaTCAATG TCCTTCGGAA GATTTGACCG
AAGCCGAAGA AAGCCTGATG 701 CGCGAACTGG CGGTTCGCGG CGCACAGGCA
ATCGGTGCGG AAGGCTGCGT 751 GCGCGTCGAT TTCCTCAAAG ATACCGACGG
CAAACTCTAT CTGTTGGAAA 801 TCAACACCCT GCCCGGTATG ACCGGCCATA G
This corresponds to the amino acid sequence <SEQ ID 316; ORF
093.ng>:
TABLE-US-00489 g093.pep 1 MQNFGKVAVL MGGFSSEREI SLDSGTAILN
ALKSKGIDAY AFDPKETPLS 51 ELKERGFQTA FNILHGTYGE DGAVQGALEL
LGIPYTGSGV AASAIGMDKY 101 RCKLIWQALG LPVPEFAVLY DDTDFDAVEE
KLGLPMFVKP AAEGSSVGVV 151 KVKEKGRLKS VYEELKHLQG RNHCRTFYRR
RRIFLPRPER QRAARHTHHP 201 RNRVLRLRSQ VQPRRHHLSM SFGRFDRSRR
KPDARTGGSR RTGNRCGRLR 251 ARRFPQRYRR QTLSVGNQHP ARYDRP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 317>:
TABLE-US-00490 m093.seq 1 ATGCAGAATT TTGGCAAAGT GGCCGTATTG
ATGGGCGGTT TTTCCAGCGA 51 ACGAGAAATC TCGCTGGACA GCGGCACCGC
CATTTTGAAT GCTTTAAAAA 101 GCAAAGGCAT AGACGCATAC GCCTTCGATC
CTAAAGAAAC CCCATTGTCT 151 GAATTGAAGG CACAAGGTTT TCAGACGGCA
TTCAACATCC TTCACGGTAC 201 TTACGGCrAA GACGGGGCGG TTCAGGGTGC
ATTGGAACTG TTGGGCATTC 251 CCTATACCGG CAGCGGTGTC GCCGCATCCG
CCATCGGCAT GGACAAATAC 301 CGCTGCAAAC TGATTTGGCA GGCATTGGGA
TTGCCCGTTC CCGAGTTCGC 351 CGTCCTGCAC GACGACACTG ATTTCGATGC
CGTCGAAGAA AAATTGGGCC 401 TGCCGATGTT TGTGAAACCG GCGGCCGAAG
GCAGCAGCGT AGGCGTGGTA 451 AAAGTCAAAG GAAAAGGCCG TCTGAAAAGC
GTTTACGAAG AATTGAAACA 501 CCTTCAGGG. CGAAATCATT GCCGAACGTT
TTATCGGCGG CGGCGAATAT 551 TCCTGCCCCG TCCTGAACGG CAAAGGGCTG
CCCGGCATAC ACATCATTCC 601 CGCAACCGAG TTTTACGACT ACGAAGCCAA
GTACAACCGC GACGACACCA 651 TTTATCAATG TCCTTCGGAA GATTTGACCG
AAGCCGAAGA AAGCCTGATG 701 CGCGAACTGG CGGTTCGCGG CGCGCAGGCA
ATCGGTGCGG AAGGCTGCGT 751 GCGCGTCGAT TTCCTCAAAG ATACCGACGG
CAAACTCTAT CTGTTGGAAA 801 TCAACACCCT GCCCGGTATG ACGAGCCATA G
This corresponds to the amino acid sequence <SEQ ID 318; ORF
093>:
TABLE-US-00491 m093.pep 1 MQNFGKVAVL MGGFSSEREI SLDSGTAILN
ALKSKGIDAY AFDPKETPLS 51 ELKAQGFQTA FNILHGTYGX DGAVQGALEL
LGIPYTGSGV AASAIGMDKY 101 RCKLIWQALG LPVPEFAVLH DDTDFDAVEE
KLGLPMFVKP AAEGSSVGVV 151 KVKGKGRLKS VYEELKHLQX RNHCRTFYRR
RRIFLPRPER QRAARHTHHS 201 RNRVLRLRSQ VQPRRHHLSM SFGRFDRSRR
KPDARTGGSR RAGNRCGRLR 251 ARRFPQRYRR QTLSVGNQHP ARYDEP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 093
shows 96.7% identity over a 276 aa overlap with a predicted ORF
(ORF 093.ng) from N. gonorrhoeae:
TABLE-US-00492 m093/g093 10 20 30 40 50 60 m093.pep
MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDPKETPLSELKAQGFQTA
||||||||||||||||||||||||||||||||||||||||||||||||||||| :||||| g093
MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDPKETPLSELKERGFQTA 10 20
30 40 50 60 70 80 90 100 110 120 m093.pep
FNILHGTYGXDGAVQGALELLGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLH
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||: g093
FNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLY 70 80
90 100 110 120 130 140 150 160 170 180 m093.pep
DDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKSVYEELKHLQXRNHCRTFYRR
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| g093
DDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKSVYEELKHLQGRNHCRTFYRR 130
140 150 160 170 180 190 200 210 220 230 240 m093.pep
RRIFLPRPERQRAARHTHHSRNRVLRLRSQVQPRRHHLSMSFGRFDRSRRKPDARTGGSR
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| g093
RRIFLPRPERQRAARHTHHPRNRVLRLRSQVQPRRHHLSMSFGRFDRSRRKPDARTGGSR 190
200 210 220 230 240 250 260 270 m093.pep
RAGNRCGRLRARRFPQRYRRQTLSVGNQHPARYDEPX
|:||||||||||||||||||||||||||||||||:|| g093
RTGNRCGRLRARRFPQRYRRQTLSVGNQHPARYDRPX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 319>:
TABLE-US-00493 a093.seq 1 ATGCAGAATT TTGGCAAAGT GGCCGTATTG
ATGGGCGGTT TTTCCAGCGA 51 ACGAGAAATC TCGCTGGACA GCGGCACCGC
CATTTTGAAT GCTTTAAAAA 101 GCAAAGGCAT AGACGCATAC GCCTTCGATC
CCAAGGAAAC CCCATTGTCT 151 GAATTGAAGG CACAAGGTTT TCAGACGGCA
TTCAACATCC TTCACGGTAC 201 TTACGGCGAA GACGGGGCTG TTCAGGGTGC
ATTGGAACTG TTGGGCATTC 251 CCTATACCGG CAGCGGTGTC GCCGCATCCG
CCATCGGCAT GGACAAATAC 301 CGCTGCAAAC TGATTTGGCA GGCATTGGGA
TTGCCCGTTC CCGAGTTCGC 351 CGTCCTGCAC GACGACACTG ATTTCGATGC
CGTCGAAGAA AAATTGGGCC 401 TGCCGATGTT TGTGAAACCG GCGGCCGAAG
GCAGCAGCGT AGGCGTGGTA 451 AAAGTCAAAG GAAAAGGCCG TCTGAAAAGC
GTTTACGAAG AATTGAAACA 501 CTTTCAGGG. CGAAATCATT GCCGAACGGT
TTATCGGCGG CGGCGAATAT 551 TCCTGCCCTG TGTTGAACGG CAAAGGCCTG
CCCGGCATAC ACATCATCCC 601 CGCGACCGAG TTTTATGACT ACGAAGCCAA
GTACAACCGC AACGACACCA 651 TTTATCAATG TCCTTCGGAA GATCTGACCG
AAGCCGAAGA AAGCCTGATG 701 CGCGAACTGG CGGTTCGCGG CGCGCAGGCA
ATCGGTGCGG AAGGCTGCGT 751 GCGCGTCGAT TTCCTCAAAG ATACCGACGG
CAAACTCTAT CTGTTGGAAA 801 TCAACACCCT GCCCGGTATG ACCGGCCATA G
This corresponds to the amino acid sequence <SEQ ID 320; ORF
093.a>:
TABLE-US-00494 a093.pep 1 MQNFGKVAVL MGGFSSEREI SLDSGTAILN
ALKSKGIDAY AFDPKETPLS 51 ELKAQGFQTA FNILHGTYGE DGAVQGALEL
LGIPYTGSGV AASAIGMDKY 101 RCKLIWQALG LPVPEFAVLH DDTDFDAVEE
KLGLPMFVKP AAEGSSVGVV 151 KVKGKGRLKS VYEELKHFQX RNHCRTVYRR
RRIFLPCVER QRPARHTHHP 201 RDRVL*LRSQ VQPQRHHLSM SFGRSDRSRR
KPDARTGGSR RAGNRCGRLR 251 ARRFPQRYRR QTLSVGNQHP ARYDRP* m093/a093
95.7% identity over a 276 aa overlap 10 20 30 40 50 60 m093.pep
MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDPKETPLSELKAQGFQTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a093
MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDPKETPLSELKAQGFQTA 10 20
30 40 50 60 70 80 90 100 110 120 m093.pep
FNILHGTYGXDGAVQGALELLGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLH
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| a093
FNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRCKLIWQALGLPVPEFAVLH 70 80
90 100 110 120 130 140 150 160 170 180 m093.pep
DDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKSVYEELKHLQXRNHCRTFYRR
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||| ||| a093
DDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKSVYEELKHFQXRNHCRTVYRR 130
140 150 160 170 180 190 200 210 220 230 240 m093.pep
RRIFLPRPERQRAARHTHHSRNRVLRLRSQVQPRRHHLSMSFGRFDRSRRKPDARTGGSR ||||||
|||| |||||| |:||| |||||||:|||||||||| ||||||||||||||| a093
RRIFLPCVERQRPARHTHHPRDRVLXLRSQVQPQRHHLSMSFGRSDRSRRKPDARTGGSR 190
200 210 220 230 240 250 260 270 m093.pep
RAGNRCGRLRARRFPQRYRRQTLSVGNQHPARYDEPX
||||||||||||||||||||||||||||||||||:|| a093
RAGNRCGRLRARRFPQRYRRQTLSVGNQHPARYDRPX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 321>:
TABLE-US-00495 g094.seq 1 ATGTATTCGC CTTTGCCCAA GCGGGCGTTG
GTGCCTGCGG CGTTGAGTTT 51 GCCGCCGATA ACGAAAGTGG GGTCGAGTCC
TGCCGCGCCG AGGATGGAGG 101 CGGTCAGGCT GGTGGTCGTG GTTTTGCCGT
GCGTAccggc aatggcgatg 151 cCGTCACGGA AGCGCATCAG CTCTGCCAGC
ATCAAGGCGC GCGGAATAAC 201 GGGAATTTGC CGCTCCAACG CAgcgacaAC
TTCGGgattT TCTTTCTTGA 251 CGGCGGTAGA GGCAACGACG ACATccgcAC
CGTTAACGTG TTCTGCGGTA 301 TGGCCGGGAT AA
This corresponds to the amino acid sequence <SEQ ID 322; ORF
094.ng>:
TABLE-US-00496 g094.pep 1 MYSPLPKRAL VPAALSLPPI TKVGSSPAAP
RMEAVRLVVV VLPCVPAMAM 51 PSRKRISSAS IKARGITGIC RSNAATTSGF
SFLTAVEATT TSAPLTCSAV 101 WPG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 323>:
TABLE-US-00497 m094.seq 1 ATGTATTCGC CTTTGCCCAA GCGGGCGTTA
GTGCCTGCGG CGTTGAGTTT 51 GCCGCCGATA ACGAAAGTCG GGTCAAGTCC
TGCCGCGCCG AGGATGGAGG 101 CGGTCAGGCT GGTGGTCGTG GTTTTGCCGT
GCGTGCCGGC AATGGCGATG 151 CCGTCACGGA AGCGCATCAA CTCCGCCAAC
ATCAGGGCGC GCGGAATAAC 201 GGGAATTTGC TGCTCCAACG CAGCGACAAC
TTCGGGATTT TCTTTTTTGA 251 CGGCGGTAGA GGTAACGACG ACATCCGCAC
CGTTAACGTG TTCGGCGGTA 301 TGGCCGGGAT AA
This corresponds to the amino acid sequence <SEQ ID 324; ORF
094>:
TABLE-US-00498 m094.pep 1 MYSPLPKRAL VPAALSLPPI TKVGSSPAAP
RMEAVRLVVV VLPCVPAMAM 51 PSRKRINSAN IRARGITGIC CSNAATTSGF
SFLTAVEVTT TSAPLTCSAV 101 WPG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 094
shows 95.1% identity over a 103 aa overlap with a predicted ORF
(ORF 094.ng) from N. gonorrhoeae:
TABLE-US-00499 m094/g094 10 20 30 40 50 60 m094.pep
MYSPLPKRALVPAALSLPPITKVGSSPAAPRMEAVRLVVVVLPCVPAMAMPSRKRINSAN
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||: g094
MYSPLPKRALVPAALSLPPITKVGSSPAAPRMEAVRLVVVVLPCVPAMAMPSRKRISSAS 10 20
30 40 50 60 70 80 90 100 m094.pep
IRARGITGICCSNAATTSGFSFLTAVEVTTTSAPLTCSAVWPGX |:||||||||
||||||||||||||||:|||||||||||||||| g094
IKARGITGICRSNAATTSGFSFLTAVEATTTSAPLTCSAVWPGX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 325>:
TABLE-US-00500 a094.seq 1 ATGTATTCGC CTTTGCCCAA GCGGGCGTTG
GTGCCTGCGG CGTTGAGTTT 51 GCCGCCGATA ACGAAAGTCG GGTCAAGTCC
TGCCGCGCCG AGGATGGAGG 101 CGGTCAGGCT GGTGGTCGTG GTTTTGCCGT
GCGTGCCGGC AATGGCGATG 151 CCGTCACGGA AGCGCATCAA CTCCGCCAAC
ATCAGGGCGC GCGGAATAAC 201 GGGAATTTGC TGCTCCAACG CAGCGACAAC
TTCGGGATTT TCTTTTTTGA 251 CGGCGGTAGA GGTAACGACG ACATCCGCAC
CGTTAACGTG TTCTGCGGTA 301 TGGCCGGGAT AA
This corresponds to the amino acid sequence <SEQ ID 326; ORF
094.a>:
TABLE-US-00501 a094.pep 1 MYSPLPKRAL VPAALSLPPI TKVGSSPAAP
RMEAVRLVVV VLPCVPAMAM 51 PSRKRINSAN IRARGITGIC CSNAATTSGF
SFLTAVEVTT TSAPLTCSAV 101 WPG* m094/a094 100.0% identity over a 103
aa overlap 10 20 30 40 50 60 m094.pep
MYSPLPKRALVPAALSLPPITKVGSSPAAPRMEAVRLVVVVLPCVPAMAMPSRKRINSAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a094
MYSPLPKRALVPAALSLPPITKVGSSPAAPRMEAVRLVVVVLPCVPAMAMPSRKRINSAN 10 20
30 40 50 60 70 80 90 100 m094.pep
IRARGITGICCSNAATTSGFSFLTAVEVTTTSAPLTCSAVWPGX
|||||||||||||||||||||||||||||||||||||||||||| a094
IRARGITGICCSNAATTSGFSFLTAVEVTTTSAPLTCSAVWPGX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 327>:
TABLE-US-00502 g095.seq 1 ATGTCCTTTC ATTTGAACAT GGACGGTGAA
TTTCATTTGC GCGCCGACGT 51 TTTCGATGTC GGTGGCGTAG ATGTCGGCGG
TATCGTCCAA ACCGTAAGTA 101 GCATAAGGTT TGCTCACTTT GGGCAAAATC
GCGCGGACGT GTTCGCTGTC 151 AACACACAAA AAGGCTTTGC CGTAGAAGGG
CATACGGTGG ATGAAATCGA 201 TAAACGCCTG ATGCAGTTTT TCGACGCTGT
GCCCGTAGGT ATCCATATGG 251 TCTTCGTCGA TATTGGTAAC GACGGACATA
ATCGGGGTCA GTGTAGGAAA 301 GAGGCATCGG ATCGTCGGCT TCGGCAACGA
TGTATTCGCC TTTGCCCAAG 351 CGGGCGTTGG TGCCTGCGGC GTTGA
This corresponds to the amino acid sequence <SEQ ID 328; ORF
095.ng>:
TABLE-US-00503 g095.pep 1 MSFHLNMDGE FHLRADVFDV GGVDVGGIVQ
TVSSIRFAHF GQNRADVFAV 51 NTQKGFAVEG HTVDEIDKRL MQFFDAVPVG
IHMVFVDIGN DGHNRGQCRK 101 EASDRRLRQR CIRLCPSGRW CLRR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 329>:
TABLE-US-00504 m095.seq 1 ATGTCCTTTC ATTTGAACAT GGACGGTGAA
TTTCATTTGC GCGCCGACGT 51 TTTCGATGTC GGTGGCGTAG ATGTCGGCGG
TATCGTCCAA ACCGTAAGTA 101 GCATAAGGTT TGCTCACTTT GGGCAAAATC
GCGCGGACGT GTTCGCTGTC 151 AATACACAAA AAGGCTTTGC CGTAGAAGGG
CATACGGTGG ATGAAATCGA 201 TAAACGCCTG ATGCAGTTTT TCGACGCTGT
GCCCGTAGGT ATCCATATGG 251 TCTTCGTCGA TATTGGTAAC GACGGACATA
ATCGGTGTCA GTGCAGAAAG 301 GATGCATCCG ACCGTCGGCT TCGGCAACGA
TGTATTCGCC TTTGCCCAAG 351 CGGGCGTTAG TGCCTGCGGC GTTGA
This corresponds to the amino acid sequence <SEQ ID 330; ORF
095>:
TABLE-US-00505 m095.pep 1 MSFHLNMDGE FHLRADVFDV GGVDVGGIVQ
TVSSIRFAHF GQNRADVFAV 51 NTQKGFAVEG HTVDEIDKRL MQFFDAVPVG
IHMVFVDIGN DGHNRCQCRK 101 DASDRRLRQR CIRLCPSGRX CLRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 095
shows 97.6% identity over a 124 aa overlap with a predicted ORF
(ORF 095.ng) from N. gonorrhoeae:
TABLE-US-00506 m095/g095 10 20 30 40 50 60 m095.pep
MSFHLNMDGEFHLRADVFDVGGVDVGGIVQTVSSIRFAHFGQNRADVFAVNTQKGFAVEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g095
MSFHLNMDGEFHLRADVFDVGGVDVGGIVQTVSSIRFAHFGQNRADVFAVNTQKGFAVEG 10 20
30 40 50 60 70 80 90 100 110 120 m095.pep
HTVDEIDKRLMQFFDAVPVGIHMVFVDIGNDGHNRCQCRKDASDRRLRQRCIRLCPSGRX
||||||||||||||||||||||||||||||||||| ||||:|||||||||||||||||| g095
HTVDEIDKRLMQFFDAVPVGIHMVFVDIGNDGHNRGQCRKEASDRRLRQRCIRLCPSGRW 70 80
90 100 110 120 m095.pep CLRRX ||||| g095 CLRRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 331>:
TABLE-US-00507 a095.seq 1 ATGTCCTTTC ATTTGAACAT GGACGGTGAA
TTTCATTTGC GCGCCGACGT 51 TTTCGATGTC GGTGGCGTAG ATGTCGGCGG
TATCGTCCAA ACCGTAAGTA 101 GCATAAGGTT TGCTCACTTT GGGCAAAATC
GCGCGGACGT GTTCGCTGTC 151 AATACACAAA AAGGCTTTGC CGTAGAAGGG
CATACGGTGG ATGAAATCGA 201 TAAACGCCTG ATGCAGCTTC TCAACACTGT
GCCCGTAGGT ATCCATATGG 251 TCTTCGTCGA TATTGGTAAC GACGGACATA
ATCGGTGTCA GTGCAGAAAG 301 GATGCATCCG ACCGTCGGCT TCGGCAACGA
TGTATTCGCC TTTGCCCAAG 351 CGGGCGTTGG TGCCTGCGGC GTTGA
This corresponds to the amino acid sequence <SEQ ID 332; ORF
095.a>:
TABLE-US-00508 a095.pep 1 MSFHLNMDGE FHLRADVFDV GGVDVGGIVQ
TVSSIRFAHF GQNRADVFAV 51 NTQKGFAVEG HTVDEIDKRL MQLLNTVPVG
IHMVFVDIGN DGHNRCQCRK 101 DASDRRLRQR CIRLCPSGRW CLRR* m095/a095
96.0% identity in 124 aa overlap 10 20 30 40 50 60 m095.pep
MSFHLNMDGEFHLRADVFDVGGVDVGGIVQTVSSIRFAHFGQNRADVFAVNTQKGFAVEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a095
MSFHLNMDGEFHLRADVFDVGGVDVGGIVQTVSSIRFAHFGQNRADVFAVNTQKGFAVEG 10 20
30 40 50 60 70 80 90 100 110 120 m095.pep
HTVDEIDKRLMQFFDAVPVGIHMVFVDIGNDGHNRCQCRKDASDRRLRQRCIRLCPSGRX
||||||||||||::::||||||||||||||||||||||||||||||||||||||||||| a095
HTVDEIDKRLMQLLNTVPVGIHMVFVDIGNDGHNRCQCRKDASDRRLRQRCIRLCPSGRW 70 80
90 100 110 120 m095.pep CLRRX ||||| a095 CLRRX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 333>:
TABLE-US-00509 g096.seq 1 ATGGCCGGTC ATACCGGGCA GGGTGTTGAT
TTCCAACAGA TAGAGTTTGC 51 CGTCGGTATC TTTGAGGAAA TCGACGCGCA
CGCAGCCTTC CGCACCGATT 101 GCCTGTGCGC CGCGAACCGC CAGTTCGCGC
ATCAGGCTTT CTTCGGCTTC 151 GGTCAAATCT TCCGAAGGAC ATTGAtaaat
ggtgTCGTCT CGGttgtaCt 201 tggcttcgta gTCGTAAAAC TCGGTTGCGG
GGATGATGTG TATGCCGGGC 251 AGCCCTTTGC CGTTCAGGAC GGGGCAGGAA
TATTCGCCGC CGCCGATAAA 301 AcgtTcggca atgaTTtcgc ccctgAAGGT
GttTCAattc ttcgtaAACG 351 CTTTTCAGAc ggccttTTTC TTTGA
This corresponds to the amino acid sequence <SEQ ID 334; ORF
096.ng>:
TABLE-US-00510 g096.pep 1 MAGHTGQGVD FQQIEFAVGI FEEIDAHAAF
RTDCLCAANR QFAHQAFFGF 51 GQIFRRTLIN GVVSVVLGFV VVKLGCGDDV
YAGQPFAVQD GAGIFAAADK 101 TFGNDFAPEG VSILRKRFSD GLFL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 335>:
TABLE-US-00511 m096.seq 1 ATGGCTCGTC ATACCGGGCA GGGTGTTGAT
TTCCAACAGA TAGAGTTTGC 51 CGTCGGTATC TTTGAGGAAA TCGACGCGCA
CGCAGCCTTC CGCACCGATT 101 GCCTGCGCGC CGCGAACCGC CAGTTCGCGC
ATCAGGCTTT CTTCGGCTTC 151 GGTCAAATCT TCCGAAGGAC ATTGATAAAT
GGTGTCGTCG CGGTTGTACT 201 TGGCTTCGTA GTCGTAAAAC TCGGTTGCGG
GAATGATGTG TATGCCGGGC 251 AGCCCTTTGC CGTTCAGGAC GGGGCAGGAA
TATTCGCCGC CGCCGATAAA 301 ACGTTCGGCA ATGATTTCGC CC.TGAAGGT
GTTTCAATTC TTCGTAAACG 351 CTTTTCAGAC GGCCTTTTCC TTTGA
This corresponds to the amino acid sequence <SEQ ID 336; ORF
096>:
TABLE-US-00512 m096.pep 1 MARHTGQGVD FQQIEFAVGI FEEIDAHAAF
RTDCLRAANR QFAHQAFFGF 51 GQIFRRTLIN GVVAVVLGFV VVKLGCGNDV
YAGQPFAVQD GAGIFAAADK 101 TFGNDFAXEG VSILRKRFSD GLFL* m096/g096
96.0% identity in 124 aa overlap 10 20 30 40 50 60 m096.pep
MARHTGQGVDFQQIEFAVGIFEEIDAHAAFRTDCLRAANRQFAHQAFFGFGQIFRRTLIN ||
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| g096
MAGHTGQGVDFQQIEFAVGIFEEIDAHAAFRTDCLCAANRQFAHQAFFGFGQIFRRTLIN 10 20
30 40 50 60 70 80 90 100 110 120 m096.pep
GVVAVVLGFVVVKLGCGNDVYAGQPFAVQDGAGIFAAADKTFGNDFAXEGVSILRKRFSD
|||:|||||||||||||:||||||||||||||||||||||||||||| |||||||||||| g096
GVVSVVLGFVVVKLGCGDDVYAGQPFAVQDGAGIFAAADKTFGNDFAPEGVSILRKRFSD 70 80
90 100 110 120 m096.pep GLFLX ||||| g096 GLFLX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 337>:
TABLE-US-00513 a096.seq 1 ATGGCCGGTC ATACCGGGCA GGGTGTTGAT
TTCCAACAGA TAGAGTTTGC 51 CGTCGGTATC TTTGAGGAAA TCGACGCGCA
CGCAGCCTTC CGCACCGATT 101 GCCTGCGCGC CGCGAACCGC CAGTTCGCGC
ATCAGGCTTT CTTCGGCTTC 151 GGTCAGATCT TCCGAAGGAC ATTGATAAAT
GGTGTCGTTG CGGTTGTACT 201 TGGCTTCGTA GTCATAAAAC TCGGTCGCGG
GGATGATGTG TATGCCGGGC 251 AGGCCTTTGC CGTTCAACAC AGGGCAGGAA
TATTCGCCGC CGCCGATAAA 301 CCGTTCGGCA ATGATTTCGC CCT.GAAAGT
GTTTCAATTC TTCGTAAACG 351 CTTTTCAGAC GGCCTTTTCC TTTGA
This corresponds to the amino acid sequence <SEQ ID 338; ORF
096.ng>:
TABLE-US-00514 a096.pep 1 MAGHTGQGVD FQQIEFAVGI FEEIDAHAAF
RTDCLRAANR QFAHQAFFGF 51 GQIFRRTLIN GVVAVVLGFV VIKLGRGDDV
YAGQAFAVQH RAGIFAAADK 101 PFGNDFAXES VSILRKRFSD GLFL* m096/a096
92.7% identity in 124 aa overlap 10 20 30 40 50 60 m096.pep
MARHTGQGVDFQQIEFAVGIFEEIDAHAAFRTDCLRAANRQFAHQAFFGFGQIFRRTLIN ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a096
MAGHTGQGVDFQQIEFAVGIFEEIDAHAAFRTDCLRAANRQFAHQAFFGFGQIFRRTLIN 10 20
30 40 50 60 70 80 90 100 110 120 m096.pep
GVVAVVLGFVVVKLGCGNDVYAGQPFAVQDGAGIFAAADKTFGNDFAXEGVSILRKRFSD
|||||||||||:||| |:|||||| |||| ||||||||| ||||||||:|||||||||| a096
GVVAVVLGFVVIKLGRGDDVYAGQAFAVQHRAGIFAAADKPFGNDFAXESVSILRKRFSD 70 80
90 100 110 120 m096.pep GLFLX ||||| a096 GLFLX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 339>:
TABLE-US-00515 g097.seq 1 ATGGATATTT CAAAACAAAC ATTGCTGGAT
AGGGTTTTTA ACCTGAAGGC 51 AAACGGTACG ACGGTACGTA CCGAGTTGAT
GGCGGGTTTG ACGACCTTTT 101 TGACGATGTG CTACATCGTT ATCGTCAATC
CCCTGATTTT GGGCGAGACC 151 GGAATGGATA TGGGGGCGGT ATTCGTCGCT
ACCTGTATCG CATCCGCCAT 201 CGGCTGTTTT GTCATGGGTT TTATCGGCAA
CTATCCGATT GCGCTTGCCC 251 CGGGGATGGG GCTGAATGCC TATTTCACCT
TTGCCGTCGT TAAGGGTATG 301 GGCGTGCCTT GGCAGGTGGC GTTGGGTGCG
GTGTTCATTT CCGGTCTGAT 351 TTTCATCCTG TTCAGCTTTT TTAAAGTCAG
GGAAATGCTG GTCAACGCAC 401 TGCCTATGGG TTTGAAAATG TCGATTGCCG
CCGGTATCGG TTTGTTTTTG 451 GCACTGATTT CCCTGAAAGG CGCAGGCATT
ATCGTTGCCA ATCCGGCAAC 501 CTTGGTCGGC TTGGGCGATA TTCATCAGCC
CAGCGCACTG TTGGCATTGT 551 TCGGTTTTGT CATGGTGGTC GTATTGGGGT
ATTTCCGCGT TCAAGGCGCA 601 ATCATCATCA CCATTCTGAC GATTACCGTC
ATTGCCAGCC TGATGGGTTT 651 GAACGAGTTT CACGGCGTGG TCGGCGAAGT
ACCGGGCATT GCGCCGACCT 701 TTATGCAGAT GGATTTTAAA GGTCTGTTTA
CCGTCAGCAT GGTCAGCGTG 751 ATTTTCGTCT TCTTCTTGGT CGATTTGTTC
GACAGTACCG GAACGCTGGT 801 CGGCGTATCC CACCGTGCCG GACTGCTGGT
GGACGGTAAG CTGCCCCGCC 851 TGAAACGCGC ACTGCTTGCA GACTCTACCG
CCATTGTGGC AGGTGCGGCT 901 TTGGGTACTT CTTCAACCAC GCCTTATGTG
GAAAGCGCGG CGGGCGTATC 951 GGCAGGCGGA CGGACCGGCC TGACGGCGGT
TACCGTCGGC GTATTGATGC 1001 TGGCGTGTCT GATGTTCTCC CCATTGGCGA
AAAGTGTTCC GGTATTTGCC 1051 ACCGCGCCCG CACTGCTTTA TGTCGGCACG
CAGATGCTCC GCAGTGCGAG 1101 GGACATTGAT TGGGACGATA TGACTGAAGC
CGCGCCCGCG TTCCTGACCA 1151 TTGTCTTCAT GCCGTTTACC TATTCGATTG
CAGACGGCAT CGCCTTCGGC 1201 TTCATCAGCT ATGCCGTGGT CAAACTTTTG
TGTCGCCGGA CTGGGGACGT 1251 GCCGCCTATG GTATGGGTTG TTGCCGTATT
GTGGGCATTG AAATTCTGGT 1301 ATTTGGGCTG A
This corresponds to the amino acid sequence <SEQ ID 340; ORF
097.ng>:
TABLE-US-00516 g097.pep 1 MDISKQTLLD RVFNLKANGT TVRTELMAGL
TTFLTMCYIV IVNPLILGET 51 GMDMGAVFVA TCIASAIGCF VMGFIGNYPI
ALAPGMGLNA YFTFAVVKGM 101 GVPWQVALGA VFISGLIFIL FSFFKVREML
VNALPMGLKM SIAAGIGLFL 151 ALISLKGAGI IVANPATLVG LGDIHQPSAL
LALFGFVMVV VLGYFRVQGA 201 IIITILTITV IASLMGLNEF HGVVGEVPGI
APTFMQMDFK GLFTVSMVSV 251 IFVFFLVDLF DSTGTLVGVS HRAGLLVDGK
LPRLKRALLA DSTAIVAGAA 301 LGTSSTTPYV ESAAGVSAGG RTGLTAVTVG
VLMLACLMFS PLAKSVPVFA 351 TAPALLYVGT QMLRSARDID WDDMTEAAPA
FLTIVFMPFT YSIADGIAFG 401 FISYAVVKLL CRRTGDVPPM VWVVAVLWAL
KFWYLG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 341>:
TABLE-US-00517 m097.seq 1 ATGGACACTT CAAAACAAAC ACTGTTGGAC
GGGATTTTTA AGCTGAAGGC 51 AAACGGTACk ACGGTGCGTA CCGAGTTGAT
GGCGGGTTTG ACAACTTTTT 101 TGACGATGTG CTACATCGTT ATCGTCAACC
CTCyGATTTT GGGCGAGACC 151 GGCATGGATA TGGGGGCGGT ATTCGTCGCT
ACCTGTATCG CGTCTGCCAT 201 CGGCTGTTTT GTTATGGGTT TTGTCGGCAA
CTATCCGATT GCACTCGCAC 251 CGGGGATGGG GCTGAATGCC TATTTCACCT
TTGCCGTCGT TAAGGGTATG 301 GGCGTGCCTT GGCAGGTTGC GTTGGGTGCG
GTGTTCATCT CCGGTCTGAT 351 TTTTATCCTG TTCAGCTTTT TTAAAGTCAG
GGAAATGCTG GTCAACGCAC 401 TGCCTATGGG TTTGAAAATG TCGATTGCTG
CCGGTATCGG TTTGTTTTTG 451 GCACTGATTT CCCTGAAAGG CGCAGGCATT
ATCGTTGCCA ATCCGGCAAC 501 CTTGGTCGGT TTGGGCGATA TTCATCAGCC
GTCCGCGTTG TTGGCATTGT 551 TCGGTTTTGC TATGGTGGTC GTATTGGGAC
ATTTCCGCGT TCAAGGCGCA 601 ATCATCATCA CCATCTTGAC CATTACCGTC
ATTGCCAGCC TGATGGGTTT 651 GAATGAATTT CACGGCATCA TCGGCGAAGT
ACCGAGCATT GCGCCGACTT 701 TTATGCAGAT GGATTTTGAA GGCCTGTTTA
CCGTCAGCAT GGTCAGTGTG 751 ATTTTCGTCT TCTTCTTGGT CGATCTATTT
GACAGTACCG GAACGCTGGT 801 CGGCATATCC CACCGTGCCG GGCTGCTGGT
GGACGGTAAG CTGCCCCGCC 851 TGAAACGCGC ACTGCTTGCA GACTCTACCG
CCATTGTGGC AGGTGCGGCT 901 TTGGGTACTT CTTCCACCAC GCCTTATGTG
GAAAGCGCGG CGGGCGTATC 951 GGCAGGCGGA CGGACCGGCC TGACGGCGGT
TACCGTCGGC GTATTGATGC 1001 TCGCCTGCCT GATGTTTTCA CCTTTGGCGA
AAAGTGTTCC CGCTTTTGCC 1051 ACCGCGCCCG CCCTGCTTTA TGTCGGCACG
CAGATGCTCC GCAGTGCGAG 1101 GGATATTGAT TGGGACGATA TGACGGAAGC
CGCACCTGCG TTCCTGACCA 1151 TTGTTTTCAT GCCGTTTACT TATTCGATTG
CAGACGGCAT CGCTTTCGGC 1201 TTCATCAGTT ATGCCGTGGT TAAACTTTTA
TGCCGCCGCA CCAAAGACGT 1251 TCCGCCTATG GTATGGATTG TTGCCGTATT
GTGGGCACTG AAATTCTGGT 1301 ATTTGGGCTG A
This corresponds to the amino acid sequence <SEQ ID 342; ORF
097>:
TABLE-US-00518 m097.pep 1 MDTSKQTLLD GIFKLKANGT TVRTELMAGL
TTFLTMCYIV IVNPXILGET 51 GMDMGAVFVA TCIASAIGCF VMGFVGNYPI
ALAPGMGLNA YFTFAVVKGM 101 GVPWQVALGA VFISGLIFIL FSFFKVREML
VNALPMGLKM SIAAGIGLFL 151 ALISLKGAGI IVANPATLVG LGDIHQPSAL
LALFGFAMVV VLGHFRVQGA 201 IIITILTITV IASLMGLNEF HGIIGEVPSI
APTFMQMDFE GLFTVSMVSV 251 IFVFFLVDLF DSTGTLVGIS HRAGLLVDGK
LPRLKRALLA DSTAIVAGAA 301 LGTSSTTPYV ESAAGVSAGG RTGLTAVTVG
VLMLACLMFS PLAKSVPAFA 351 TAPALLYVGT QMLRSARDID WDDMTEAAPA
FLTIVFMPFT YSIADGIAFG 401 FISYAVVKLL CRRTKDVPPM VWIVAVLWAL
KFWYLG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 097
shows 96.3% identity over a 436 aa overlap with a predicted ORF
(ORF 097.ng) from N. gonorrhoeae:
TABLE-US-00519 m097/g097 10 20 30 40 50 60 m097.pep
MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNPXILGETGMDMGAVFVA ||
||||||| :|:|||||||||||||||||||||||||||||| ||||||||||||||| g097
MDISKQTLLDRVFNLKANGTTVRTELMAGLTTFLTMCYIVIVNPLILGETGMDMGAVFVA 10 20
30 40 50 60 70 80 90 100 110 120 m097.pep
TCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFISGLIFIL
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| g097
TCIASAIGCFVMGFIGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFISGLIFIL 70 80
90 100 110 120 130 140 150 160 170 180 m097.pep
FSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGIIVANPATLVGLGDIHQPSAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g097
FSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGIIVANPATLVGLGDIHQPSAL 130
140 150 160 170 180 190 200 210 220 230 240 m097.pep
LALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLNEFHGIIGEVPSIAPTFMQMDFE
||||||:||||||:||||||||||||||||||||||||||||::||||:||||||||||: g097
LALFGFVMVVVLGYFRVQGAIIITILTITVIASLMGLNEFHGVVGEVPGIAPTFMQMDFK 190
200 210 220 230 240 250 260 270 280 290 300 m097.pep
GLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLLVDGKLPRLKRALLADSTAIVAGAA
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g097
GLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLLVDGKLPRLKRALLADSTAIVAGAA 250
260 270 280 290 300 310 320 330 340 350 360 m097.pep
LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLMFSPLAKSVPAFATAPALLYVGT
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| g097
LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLMFSPLAKSVPVFATAPALLYVGT 310
320 330 340 350 360 370 380 390 400 410 420 m097.pep
QMLRSARDIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVVKLLCRRTKDVPPM
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| g097
QMLRSARDIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVVKLLCRRTGDVPPM 370
380 390 400 410 420 430 m097.pep VWIVAVLWALKFWYLGX
||:|||||||||||||| g097 VWVVAVLWALKFWYLGX 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 343>
TABLE-US-00520 a097.seq 1 ATGGACACTT CAAAACAAAC ACTGTTGGAC
GGGATTTTTA AGCTGAAGGC 51 AAACGGTACG ACGGTGCGTA CCGAGTTGAT
GGCGGGTTTG ACAACTTTTT 101 TGACGATGTG CTACATCGTT ATCGTCAACC
CTCTGATTTT GGGCGAGACC 151 GGCATGGATA TGGGGGCGGT ATTCGTCGCT
ACCTGTATCG CGTCTGCCAT 201 CGGCTGTTTT GTTATGGGTT TTGTCGGCAA
CTATCCGATT GCACTCGCAC 251 CGGGGATGGG GCTGAATGCC TATTTCACCT
TTGCCGTCGT TAAGGGTATG 301 GGCGTGCCTT GGCAGGTTGC GTTGGGTGCG
GTGTTCATCT CCGGTCTGAT 351 TTTCATCCTG TTCAGCTTTT TTAAAGTCAG
GGAAATGCTG GTCAACGCAC 401 TGCCTATGGG TTTGAAAATG TCGATTGCTG
CCGGTATCGG TTTGTTTTTG 451 GCACTGATTT CCCTGAAAGG CGCAGGCATT
ATCGTTGCCA ATCCGGCAAC 501 CTTGGTCGGC TTGGGCGATA TTCATCAGCC
GTCCGCGTTG TTGGCACTGT 551 TCGGTTTTGC CATGGTGGTC GTATTGGGAC
ATTTCCGCGT TCAAGGCGCA 601 ATCATCATCA CCATTTTGAC GATTACCGTC
ATTGCCAGCC TGATGGGTTT 651 GAACGAATTT CACGGCATCA TCGGCGAAGT
GCCGAGCATT GCGCCGACTT 701 TTATGCAGAT GGATTTTAAA GGGTTGTTTA
CCGTCAGCAT GGTCAGCGTG 751 ATTTTCGTCT TTTTCCTAGT CGATCTGTTC
GACAGTACCG GAACACTGGT 801 CGGTGTATCG CATCGTGCCG GACTGCTGGT
GGACGGTAAG CTGCCCCGCC 851 TGAAACGCGC ACTGCTTGCA GACTCTACCG
CTATTGTGGC AGGTGCGGCT 901 TTGGGTACTT CTTCAACCAC GCCTTATGTG
GAAAGTGCGG CGGGCGTATC 951 GGCAGGCGGG CGGACAGGTC TGACGGCGGT
TACCGTCGGC GTATTGATGC 1001 TCGCCTGCCT GATGTTTTCA CCTTTGGCGA
AAAGTGTTCC CGCTTTTGCC 1051 ACCGCGCCCG CCCTGCTTTA TGTCGGCACG
CAGATGCTCC GCAGTGCGAG 1101 GGACATCGAT TGGGACGATA TGACGGAAGC
CGCACCCGCA TTCCTGACCA 1151 TTGTCTTCAT GCCGTTTACC TATTCGATTG
CAGACGGCAT CGCTTTCGGC 1201 TTCATCAGTT ATGCCGTGGT TAAACTTTTA
TGCCGCCGCA CCAAAGACGT 1251 TCCGCCTATG GTATGGATTG TTGCCGTATT
GTGGGCACTG AAATTCTGGT 1301 ATTTGGGCTG A
This corresponds to the amino acid sequence <SEQ ID 344; ORF
097.a>:
TABLE-US-00521 a097.pep 1 MDTSKQTLLD GIFKLKANGT TVRTELMAGL
TTFLTMCYIV IVNPLILGET 51 GMDMGAVFVA TCIASAIGCF VMGFVGNYPI
ALAPGMGLNA YFTFAVVKGM 101 GVPWQVALGA VFISGLIFIL FSFFKVREML
VNALPMGLKM SIAAGIGLFL 151 ALISLKGAGI IVANPATLVG LGDIHQPSAL
LALFGFAMVV VLGHFRVQGA 201 IIITILTITV IASLMGLNEF HGIIGEVPSI
APTFMQMDFK GLFTVSMVSV 251 IFVFFLVDLF DSTGTLVGVS HRAGLLVDGK
LPRLKRALLA DSTAIVAGAA 301 LGTSSTTPYV ESAAGVSAGG RTGLTAVTVG
VLMLACLMFS PLAKSVPAFA 351 TAPALLYVGT QMLRSARDID WDDMTEAAPA
FLTIVFMPFT YSIADGIAFG 401 FISYAVVKLL CRRTKDVPPM VWIVAVLWAL KFWYLG*
m097/a097 99.3% identity in 436 aa overlap 10 20 30 40 50 60
m097.pep
MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNPXILGETGMDMGAVFVA
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| a097
MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNPLILGETGMDMGAVFVA 10 20
30 40 50 60 70 80 90 100 110 120 m097.pep
TCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFISGLIFIL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a097
TCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVPWQVALGAVFISGLIFIL 70 80
90 100 110 120 130 140 150 160 170 180 m097.pep
FSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGIIVANPATLVGLGDIHQPSAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a097
FSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGIIVANPATLVGLGDIHQPSAL 130
140 150 160 170 180 190 200 210 220 230 240 m097.pep
LALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLNEFHGIIGEVPSIAPTFMQMDFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a097
LALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLNEFHGIIGEVPSIAPTFMQMDFK 190
200 210 220 230 240 250 260 270 280 290 300 m097.pep
GLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLLVDGKLPRLKRALLADSTAIVAGAA
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| a097
GLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLLVDGKLPRLKRALLADSTAIVAGAA 250
260 270 280 290 300 310 320 330 340 350 360 m097.pep
LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLMFSPLAKSVPAFATAPALLYVGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a097
LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLMFSPLAKSVPAFATAPALLYVGT 310
320 330 340 350 360 370 380 390 400 410 420 m097.pep
QMLRSARDIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVVKLLCRRTKDVPPM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a097
QMLRSARDIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYAVVKLLCRRTKDVPPM 370
380 390 400 410 420 430 m097.pep VWIVAVLWALKFWYLGX
||||||||||||||||| a097 VWIVAVLWALKFWYLGX 430
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 345>:
TABLE-US-00522 g098.seq 1 ATGACCGCCG ACGGTCTCTT CGTCGCTTTC
AACTTCAATA CGTTTGCCGT 51 TGTGCGAATA TTGATACCAG TACAGCAGGA
TGCTGCCCAG GCTGGCGATC 101 AGTTTGTCGG CGATGTCGCG CGCTTCGCTG
TCGGGATGGC TTTCGCGTTC 151 GGGATGAACG CAGCCGAGCA TGGACACGCC
GGTACGCATC ACGTCCATCG 201 GATGGGTATG TGCAGGCAGG CTTTCCAAAA
CTTTAATCAC ACGGATAGGC 251 AGGCCGCGCA TGGATTTGAG CTTGGTTTTA
TAAGCGGCCA GCTCGAATTT 301 GTTGGGCAGA TGGCCGTGAA TCAGCAAGTG
TGCGACTTCT TCAAACTCGC 351 ATTTTTGTGC CAAATTAGAA TGTCGTAA
This corresponds to the amino acid sequence <SEQ ID 346; ORF
098.ng>:
TABLE-US-00523 g098.pep 1 MTADGLFVAF NFNTFAVVRI LIPVQQDAAQ
AGDQFVGDVA RFAVGMAFAF 51 GMNAAEHGHA GTHHVHRMGM CRQAFQNFNH
TDRQAAHGFE LGFISGQLEF 101 VGQMAVNQQV CDFFKLAFLC QIRMS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 347>:
TABLE-US-00524 m098.seq 1 ATGACCGCCG ATGGTCTCTT CGTCGCTTTC
AACCTCAATG CGTTTGCCGT 51 TGTGCGAATA TTGATACCAG TACAAGAGGA
TGCTGCCGAG GCTGGCGATC 101 AGTTTGTCGG CGATGTCGCG CGCTTCACTT
TCCGGATGGC TTTCACGTTC 151 AGGATGAACG CAGCCCAGCA TGGATACGCC
GGTACGCATT ACGTCCATCG 201 GATGGGTATG TGCAGGCAGG CTTTCCAAAA
CTTTAATCAC ACGGATAGGC 251 AGGCCGCGCA TGGATTTGAG CTTGGTTTTA
TAAGCGGCCA GCTCGAATTT 301 GTTGGGCAGA TGGCCGTGAA TCAGCAGGTG
GGCGACTTCT TCAAACTCGC 351 ATTTTTGTGC CAAATCAGAA TGTCGTAA
This corresponds to the amino acid sequence <SEQ ID 348; ORF
098>:
TABLE-US-00525 m098.pep 1 MTADGLFVAF NLNAFAVVRI LIPVQEDAAE
AGDQFVGDVA RFTFRMAFTF 51 RMNAAQHGYA GTHYVHRMGM CRQAFQNFNH
TDRQAAHGFE LGFISGQLEF 101 VGQMAVNQQV GDFFKLAFLC QIRMS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 098
shows 89.6% identity over a 125 aa overlap with a predicted ORF
(ORF 098.ng) from N. gonorrhoeae:
TABLE-US-00526 m098/g098 10 20 30 40 50 60 m098.pep
MTADGLFVAFNLNAFAVVRILIPVQEDAAEAGDQFVGDVARFTFRMAFTFRMNAAQHGYA
|||||||||||:|:|||||||||||:|||:||||||||||||: |||:| ||||:||:| g098
MTADGLFVAFNFNTFAVVRILIPVQQDAAQAGDQFVGDVARFAVGMAFAFGMNAAEHGHA 10 20
30 40 50 60 70 80 90 100 110 120 m098.pep
GTHYVHRMGMCRQAFQNFNHTDRQAAHGFELGFISGQLEFVGQMAVNQQVGDFFKLAFLC
|||:|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| g098
GTHHVHRMGMCRQAFQNFNHTDRQAAHGFELGFISGQLEFVGQMAVNQQVCDFFKLAFLC 70 80
90 100 110 120 m098.pep QIRMSX |||||| g098 QIRMSX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 349>:
TABLE-US-00527 a098.seq 1 ATGACCGCCG ATGGTCTCTT CGTCGCTTTC
AACCTCAATG CGTTTGCCGT 51 TGTGCGAATA TTGATACCAG TACAAGAGGA
TGCTGCCGAG GCTGGCGATC 101 AGTTTGTCGG CGATGTCGCG CGCTTCACTT
TCCGGATGGC TTTCACGTTC 151 AGGATGAACG CAGCCCAGCA TGGATACGCC
GGTACGCATT ACGTCCATCG 201 GATGGGTATG TGCAGGCAGG CTTTCCAAAA
CTTTAATCAC ACGGATAGGC 251 AGGCCGCGCA TGGATTTGAG CTTGGTTTTA
TAAGCGGCCA GCTCGAATTT 301 GTTGGGCAGA TGGCCGTGAA TCAGCAGGTG
GGCGACTTCT TCAAACTCGC 351 ATTTTTGTGC CAAATCAGAA TGTCGTAA
This corresponds to the amino acid sequence <SEQ ID 350; ORF
098.a>:
TABLE-US-00528 a098.pep 1 MTADGLFVAF NLNAFAVVRI LIPVQEDAAE
AGDQFVGDVA RFTFRMAFTF 51 RMNAAQHGYA GTHYVHRMGM CRQAFQNFNH
TDRQAAHGFE LGFISGQLEF 101 VGQMAVNQQV GDFFKLAFLC QIRMS* m098/a098
100.0% identity in 125 aa overlap 10 20 30 40 50 60 m098.pep
MTADGLFVAFNLNAFAVVRILIPVQEDAAEAGDQFVGDVARFTFRMAFTFRMNAAQHGYA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a098
MTADGLFVAFNLNAFAVVRILIPVQEDAAEAGDQFVGDVARFTFRMAFTFRMNAAQHGYA 10 20
30 40 50 60 70 80 90 100 110 120 m098.pep
GTHYVHRMGMCRQAFQNFNHTDRQAAHGFELGFISGQLEFVGQMAVNQQVGDFFKLAFLC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a098
GTHYVHRMGMCRQAFQNFNHTDRQAAHGFELGFISGQLEFVGQMAVNQQVGDFFKLAFLC 70 80
90 100 110 120 m098.pep QIRMSX |||||| a098 QIRMSX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 351>:
TABLE-US-00529 g099.seq 1 ATGCTGGGAC GCGCGTCCAT GATGCGCCTG
CCCGATATTG TCGGCGTGGA 51 GCTGACGGGC AAACGGCAGG CGGGCATTAC
TGCCACAGAC ATCGTGTTGG 101 CACTGACCGA ATTCTTGCGT AAAGAGCGCG
TGGTCGGGGC GTTTGTCGAA 151 TTTTTCGGCG AGGGCGCGAG AAGCCTGTCT
ATCGGCGACC GCGCGACCAT 201 TTCCAACATG ACGCCGGAGT TCGGCGCGAC
TGCCGCCATG TTCGCCATCG 251 ACGCGCAAAC TATTGATTAT TTGAAACTGA
CCGGACGTGA CGACGCGCAG 301 GTGAAATTGG TGGAAACCTA CGCCAAAACC
GCAGGCTTAT GGGCAGGTGG 351 CTTGAAAACC GCCGTTTATC CGCGCGTTTT
GAAATTTGAT TTGAGCAGCG 401 TAACGCGCAA TATGGCAGGC CCGAGCAACC
CGCACGCGCG TTTTGCCACC 451 GCCGATTTGG CGGCGAAAGG GCTGGCGAAG
CCTTACGAAG AGCCTTCAGA 501 CGGCCAAATG CCTGACGGTG CAGTGATTAT
TGCCGCGATT ACTTCGTGTA 551 CCAATACTTC CAACCCGCGC AACGTTGTCG
CCGCCGCACT GTTGGCACGC 601 AATGCCAACC GCCTCGGCTT GAAACGCAAA
CCTTGGGTGA AATCTTCGTT 651 TGCCCCGGGT TCAAAAGTAG CCGGAATCTA
TTTGAAAGAA GCAGGCTTGT 701 TGCCCGAAAT GGAAAAACTC GGCTTCGGTA
TCGTCGCCTT CGCATGTACC 751 ACCTGTAACG GCATGAgcgG CGCGCTcgaC
CCGAAAATCC AACAAGAAAT 801 CATCGACCGC GAtttgtacg cCACCGCCGT
ATTGTCAGGC AACCGCAACT 851 TCGACGGCCG TATCCATCCG TATGCGAAAC
AGGCTTTCCT CGCTTCGCCT 901 CCTTTGGTCG TTGCCTACGC ATTGGCAGGT
AGCATCCGTT TCGATATTGA 951 AAACGACGTA CTCGGCGTTG CAGACGGCCG
CGAAATCCGC CTGAAAGATA 1001 TCTGGCCGAC AGACGAAGAA ATCGATGCCA
TCGTTGCCGA ATATGTGAAA 1051 CCGCAACAAT TCCGCGACAT TTATATCCCG
ATGTCCGACA CCGGCACAGC 1101 GCAAAAAGCA CCAAGCCCGC TGTACGACTG
GCGACCGATG TCCACCTACA 1151 TCCGCCGTCC GCCCTATTGG GAAGGCGCAC
TGGCAGGGGA ACGTACATTA 1201 AGAGGTATGC GTCCGCCGGC GATTTTGCCC
GACAACATCA CCACCGACCA 1251 CATCTCgcca tCCAATGCGA TTTTGGCCGG
cagTGCcgca ggtgaATATT 1301 TGGCGAAAAT GGGTTTGCCT GAAGAagaCT
TCAACTCTTA CGCAACCCAC 1351 CGCGGCGACC ACTTGACCGC CCAACGCGCA
ACCTTCGCCA ATCCGAAACT 1401 GTTTAACGAA ATGGTGAGAA ACGAAGACGG
CAGCGTACGC CAAGGTtcgt 1451 tggcacgcgT tgaacCAGAA GGCCAAACCA
TGCGCATGTG GGAAGCCATC 1501 GAAACCTATA TGAACCGCAA ACAGCCGCTT
ATCATCATTG CCGGTGCGGA 1551 CTATGGTCAA GGCTCAAGCC GCGACTGGGC
GGCGAAGGGC GTGCGGCTGG 1601 CGGGTGTGGA AGCCATCGCC GCCGAAGGTT
TCGAGCGCAT CCACCGCACC 1651 AACCTCATCG GCATGGGCGT CTTGCCGCTG
CAATTCAAAC CCGGCACCAA 1701 CCGCCATACC CTGCAACTGG ACGGTACGGA
AACCTACGAC GTTGTCGGCG 1751 AACGCACACC GCGCTGCGGC CTGACCCTCG
TGATTCACCG TAAAAACGGA 1801 GAAACCGTCG AAGTTCCGGT TACCTGCCGC
CCCGATACCG CAGAAGAAGC 1851 ATTGGTATAT GAAGCCGGCG GCGTATTGCA
ACGGTTTGCA CAGGACTTTT 1901 TGGAAGGGAA CGCGGCTTAG
This corresponds to the amino acid sequence <SEQ ID 352; ORF
099.ng>:
TABLE-US-00530 g099.pep 1 MLGRASMMRL PDIVGVELTG KRQAGITATD
IVLALTEFLR KERVVGAFVE 51 FFGEGARSLS IGDRATISNM TPEFGATAAM
FAIDAQTIDY LKLTGRDDAQ 101 VKLVETYAKT AGLWAGGLKT AVYPRVLKFD
LSSVTRNMAG PSNPHARFAT 151 ADLAAKGLAK PYEEPSDGQM PDGAVIIAAI
TSCTNTSNPR NVVAAALLAR 201 NANRLGLKRK PWVKSSFAPG SKVAGIYLKE
AGLLPEMEKL GFGIVAFACT 251 TCNGMSGALD PKIQQEIIDR DLYATAVLSG
NRNFDGRIHP YAKQAFLASP 301 PLVVAYALAG SIRFDIENDV LGVADGREIR
LKDIWPTDEE IDAIVAEYVK 351 PQQFRDIYIP MSDTGTAQKA PSPLYDWRPM
STYIRRPPYW EGALAGERTL 401 RGMRPPAILP DNITTDHISP SNAILAGSAA
GEYLAKMGLP EEDFNSYATH 451 RGDHLTAQRA TFANPKLFNE MVRNEDGSVR
QGSLARVEPE GQTMRMWEAI 501 ETYMNRKQPL IIIAGADYGQ GSSRDWAAKG
VRLAGVEAIA AEGFERIHRT 551 NLIGMGVLPL QFKPGTNRHT LQLDGTETYD
VVGERTPRCG LTLVIHRKNG 601 ETVEVPVTCR PDTAEEALVY EAGGVLQRFA
QDFLEGNAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 353>:
TABLE-US-00531 m099.seq 1 ATGCTGGGAC GCGCGTCCAT GATGCGCCTG
CCCGATATTG TCGGCGTTGA 51 GCTGAACGGC AAACGGCAGG CGGGCATTAC
GGCGACGGAT ATTGTGTTGG 101 CACTGACCGA GTTTCTGCGC AAAGAACGCG
TGGTCGGGGC GTTTGTCGAA 151 TTCTTCGGCG AGGGCGCGAG AAGCCTGTCT
ATCGGCGACC GCGCGACCAT 201 TTCCAACATG ACGCCGGAGT TCGGCGCGAC
TGCCGCGATG TTCGCTATTG 251 ATGAGCAAAC CATTGATTAT TTGAAACTGA
CCGGACGCGA CGACGCGCAG 301 GTGAAATTGG TGGAAACCTA CGCCAAAACC
GCAGGCTTGT GGGCAGATGC 351 CTTGAAAACC GCCGTTTATC CTCGCGTTTT
GAAATTTGAT TTGAGCAGCG 401 TAACGCGCAA TATGGCAGGC CCAAGTAACC
CGCATGCCCG TTTTGCGACC 451 GCCGATTTGG CGGCGAAAGG GCTGGCGAAG
CCTTACGAAG AGCCTTCGGA 501 CGGCCAAATG CCCGACGGCT CGGTCATCAT
CGCCGCGATT ACCAGTTGCA 551 CCAACACTTC CAACCCGCGC AACGTTGTTG
CCGCCGCGCT CTTGGCACGC 601 AATGCCAACC GTCTCGGCTT GAAACGCAAA
CCTTGGGTGA AATCTTCGTT 651 TGCCCCGGGT TCAAAAGTAG CCGAAATCTA
TTTGAAAGAA GCGGGCCTGT 701 TGCCCGAAAT GGAAAAACTC GGCTTCGGTA
TCGTCGCCTT CGCCTGCACC 751 ACCTGCAACG GCATGAGTGG CGCGCTGGAT
CCGAAAATCC AGAAAGAAAT 801 CATCGACCGC GATTTGTACG CCACCGCCGT
ATTATCAGGC AACCGCAACT 851 TCGACGGCCG TATCCACCCG TATGCGAAAC
AGGCTTTCCT CGCTTCGCCT 901 CCGTTGGTCG TTGCCTACGC GCTGGCAGGC
AGTATCCGTT TCGATATTGA 951 AAACGACGTA CTCGGCGTTG CAGACGGCAA
GGAAATCCGC CTGAAAGACA 1001 TTTGGCCTGC CGATGAAGAA ATCGATGCCG
TCGTTGCCGA ATATGTGAAA 1051 CCGCAGCAGT TCCGCGATGT GTATGTACCG
ATGTTCGACA CCGGCACAGC 1101 GCAAAAAGCA CCCAGTCCGC TGTACGATTG
GCGTCCGATG TCCACCTACA 1151 TCCGCCGTCC GCCTTACTGG GAAGGCGCGC
TGGCAGGGGA ACGCACATTA 1201 AGAGGTATGC GTCCGCTGGC GATTTTGCCC
GACAACATCA CCACCGACCA 1251 CCTCTCGCCG TCCAATGCGA TTTTGGCCGT
CAGTGCCGCA GGCGAGTATT 1301 TGGCGAAAAT GGGTTTGCCT GAAGAAGACT
TCAACTCTTA CGCAACCCAC 1351 CGCGGCGACC ACTTGACCGC CCAACGCGCT
ACCTTCGCCA ATCCGAAACT 1401 GTTTAACGAA ATGGTGAAAA ACGAAGACGG
CAGCGTGCGC CAAGGCTCGT 1451 TCGCCCGCGT CGAACCCGAA GGCGAAACCA
TGCGCATGTG GGAAGCCATC 1501 GAAACCTATA TGAACCGCAA ACAGCCGCTC
ATCATCATTG CCGGTGCGGA 1551 CTATGGTCAA GGCTCAAGCC GCGACTGGGC
TGCAAAAGGC GTACGCCTCG 1601 CCGGCGTAGA AGCGATTGTT GCCGAAGGCT
TCGAGCGTAT CCACCGCACC 1651 AACCTTATCG GCATGGGCGT GTTGCCGCTG
CAGTTCAAAC CCGACACCAA 1701 CCGCCATACC CTGCAACTGG ACGGTACGGA
AACCTACGAC GTGGTCGGCG 1751 AACGCACACC GCGCTGCGAC CTGACCCTCG
TGATTCACCG TAAAAACGGC 1801 GAAACCGTTG AAGTTCCCGT TACCTGCTGC
CTCGATACTG CAGAAGAAGT 1851 ATTGGTATAT GAAGCCGGCG GCGTGTTGCA
ACGGTTTGCA CAGGATTTTT 1901 TGGAAGGGAA CGCGGCTTAG
This corresponds to the amino acid sequence <SEQ ID 354; ORF
099>:
TABLE-US-00532 m099.pep 1 MLGRASMMRL PDIVGVELNG KRQAGITATD
IVLALTEFLR KERVVGAFVE 51 FFGEGARSLS IGDRATISNM TPEFGATAAM
FAIDEQTIDY LKLTGRDDAQ 101 VKLVETYAKT AGLWADALKT AVYPRVLKFD
LSSVTRNMAG PSNPHARFAT 151 ADLAAKGLAK PYEEPSDGQM PDGSVIIAAI
TSCTNTSNPR NVVAAALLAR 201 NANRLGLKRK PWVKSSFAPG SKVAEIYLKE
AGLLPEMEKL GFGIVAFACT 251 TCNGMSGALD PKIQKEIIDR DLYATAVLSG
NRNFDGRIHP YAKQAFLASP 301 PLVVAYALAG SIRFDIENDV LGVADGKEIR
LKDIWPADEE IDAVVAEYVK 351 PQQFRDVYVP MFDTGTAQKA PSPLYDWRPM
STYIRRPPYW EGALAGERTL 401 RGMRPLAILP DNITTDHLSP SNAILAVSAA
GEYLAKMGLP EEDFNSYATH 451 RGDHLTAQRA TFANPKLFNE MVKNEDGSVR
QGSFARVEPE GETMRMWEAI 501 ETYMNRKQPL IIIAGADYGQ GSSRDWAAKG
VRLAGVEAIV AEGFERIHRT 551 NLIGMGVLPL QFKPDTNRHT LQLDGTETYD
VVGERTPRCD LTLVIHRKNG 601 ETVEVPVTCC LDTAEEVLVY EAGGVLQRFA
QDFLEGNAA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 099
shows 96.2% identity over a 639 aa overlap with a predicted ORF
(ORF 099.ng) from N. gonorrhoeae:
TABLE-US-00533 m099/g099 10 20 30 40 50 60 m099.pep
MLGRASMMRLPDIVGVELNGKRQAGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLS
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| g099
MLGRASMMRLPDIVGVELTGKRQAGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLS 10 20
30 40 50 60 70 80 90 100 110 120 m099.pep
IGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVETYAKTAGLWADALKT
||||||||||||||||||||||||| ||||||||||||||||||||||||||| :||| g099
IGDRATISNMTPEFGATAAMFAIDAQTIDYLKLTGRDDAQVKLVETYAKTAGLWAGGLKT 70 80
90 100 110 120 130 140 150 160 170 180 m099.pep
AVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYEEPSDGQMPDGSVIIAAI
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| g099
AVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYEEPSDGQMPDGAVIIAAI 130
140 150 160 170 180 190 200 210 220 230 240 m099.pep
TSCINTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGSKVAEIYLKEAGLLPEMEKL
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| g099
TSCINTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGSKVAGIYLKEAGLLPEMEKL 190
200 210 220 230 240 250 260 270 280 290 300 m099.pep
GFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASP
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| g099
GFGIVAFACTTCNGMSGALDPKIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASP 250
260 270 280 290 300 310 320 330 340 350 360 m099.pep
PLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPADEEIDAVVAEYVKPQQFRDVYVP
||||||||||||||||||||||||||:|||||||||:||||||:||||||||||||:|:| g099
PLVVAYALAGSIRFDIENDVLGVADGREIRLKDIWPTDEEIDAIVAEYVKPQQFRDIYIP 310
320 330 340 350 360 370 380 390 400 410 420 m099.pep
MFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALAGERTLRGMRPLAILPDNITTDHLSP |
||||||||||||||||||||||||||||||||||||||||||| |||||||||||:|| g099
MSDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALAGERTLRGMRPPAILPDNITTDHISP 370
380 390 400 410 420 430 440 450 460 470 480 m099.pep
SNAILAVSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVR ||||||
|||||||||||||||||||||||||||||||||||||||||||||:||||||| g099
SNAILAGSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVRNEDGSVR 430
440 450 460 470 480 490 500 510 520 530 540 m099.pep
QGSFARVEPEGETMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIV
|||:|||||||:|||||||||||||||||||||||||||||||||||||||||||||||: g099
QGSLARVEPEGQTMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIA 490
500 510 520 530 540 550 560 570 580 590 600 m099.pep
AEGFERIHRTNLIGMGVLPLQFKPDTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNG
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| g099
AEGFERIHRTNLIGMGVLPLQFKPGTNRHTLQLDGTETYDVVGERTPRCGLTLVIHRKNG 550
560 570 580 590 600 610 620 630 640 m099.pep
ETVEVPVTCCLDTAEEVLVYEAGGVLQRFAQDFLEGNAAX |||||||||
|||||:||||||||||||||||||||||| g099
ETVEVPVTCRPDTAEEALVYEAGGVLQRFAQDFLEGNAAX 610 620 630 640
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 355>:
TABLE-US-00534 a099.seq 1 ATGCTGGGAC GCGCGTCCAT GATGCGCCTG
CCCGATATTG TCGGCGTTGA 51 GCTGAACGGC AAACGGAAGG CGGGCATTAC
GGCGACGGAT ATTGTGTTGG 101 CACTGACCGA GTTTCTGCGC AAAGAACGCG
TGGTCGGGGC GTTTGTCGAA 151 TTCTTCGGCG AGGGCGCGAG AAGCCTGTCT
ATCGGCGACC GCGCGACCAT 201 TTCCAACATG ACGCCGGAGT TCGGCGCGAC
TGCCGCGATG TTCGCTATTG 251 ATGAGCAAAC CATTGATTAT TTGAAACTGA
CCGGACGCGA CGACGCGCAG 301 GTGAAATTGG TGGAAACCTA CGCCAAAACC
GCAGGCTTGT GGGCAGATGC 351 CTTGAAAACC GCCGTTTATC CGCGCGTTTT
GAAATTTGAT TTGAGCAGCG 401 TAACGCGCAA TATGGCAGGC CCGAGCAACC
CGCACGCGCG TTTTGCGACC 451 GCCGATTTGG CCGGCAAAGG CTTGGCTAAA
CCTTACGAAG AGCCTTCAGA 501 CGGCCAAATG CCTGACGGTG CAGTGATTAT
TGCCGCGATT ACTTCCTGTA 551 CCAATACTTC CAATCCGCGC AACGTTGTCG
CCGCCGCGCT GTTGGCACGC 601 AATGCCAACC GCCTCGGCTT GCAACGCAAA
CCTTGGGTGA AATCTTCGTT 651 TGCCCCGGGT TCAAAAGTAG CCGAAATCTA
TTTGAAAGAA GCAGATCTGC 701 TGCCCGAAAT GGAAAAACTC GGCTTCGGTA
TCGTTGCCTT CGCATGTACC 751 ACCTGTAACG GCATGAGCGG CGCGCTGGAT
CCGAAAATCC AGAAAGAAAT 801 CATCGACCGC GATTTGTACG CCACCGCCGT
ATTGTCAGGC AACCGCAACT 851 TTGACGGCCG TATCCATCCG TATGCGAAAC
AGGCTTTCCT CGCTTCGCCT 901 CCGTTGGTCG TTGCCTACGC GCTGGCAGGC
AGCATCCGTT TCGATATTGA 951 AAACGACGTA CTCGGCGTTG CAGACGGCAA
AGAAATCCGC CTGAAAGACA 1001 TTTGGCCTAC CGATGAAGAA ATCGATGCCA
TCGTTGCCGA ATATGTGAAA 1051 CCGCAGCAAT TTCGCGACGT TTATATCCCG
ATGTTCGACA CCGGCACAGC 1101 GCAAAAAGCA CCAAGCCCGC TGTACGACTG
GCGTCCAATG TCTACCTATA 1151 TCCGCCGCCC ACCTTACTGG GAAGGCGCAC
TGGCAGGGGA ACGCACATTA 1201 AGCGGTATGC GTCCGCTGGC GATTTTGCCC
GACAACATCA CCACCGACCA 1251 TCTCTCGCCA TCCAATGCGA TTTTGGCAAG
CAGTGCCGCA GGCGAATATT 1301 TGGCAAAAAT GGGTTTGCCT GAAGAAGACT
TCAACTCTTA CGCAACCCAC 1351 CGTGGCGACC ACTTGACCGC CCAACGCGCA
ACCTTCGCCA ATCCGAAACT 1401 GTTTAACGAA ATGGTGAGAA ACGAAGACGG
CAGCGTACGC CAAGGTTCGC 1451 TGGCACGCGT TGAACCCGAA GGCCAAACCA
TGCGCATGTG GGAAGCCATC 1501 GAAACCTATA TGAACCGCAA ACAGCCGCTC
ATCATCATTG CCGGCGCGGA 1551 CTACGGTCAA GGCTCAAGCC GCGACTGGGC
TGCAAAAGGC GTACGCCTCG 1601 CCGGCGTGGA AGCGATTGTT GCCGAAGGCT
TCGAGCGTAT CCACCGCACC 1651 AACTTGATCG GTATGGGCGT GTTGCCGCTG
CAGTTCAAAC CGGGTACCAA 1701 CCGCCACACC CTGCAACTGG ACGGTACGGA
AACCTACGAC GTTGTCGGCG 1751 AACGCACACC GCGCTGCGAC CTGACCCTTG
TGATTCACCG TAAAAACGGC 1801 GAGACCGTCG AAGTCCCCAT TACCTGCCGC
CTCGATACCG CAGAAGAAGT 1851 GTTGGTATAT GAAGCCGGTG GCGTATTGCA
ACGGTTTGCA CAGGATTTTT 1901 TGGAAGGGAA CGCGGCTTAG
This corresponds to the amino acid sequence <SEQ ID 356; ORF
099.a>:
TABLE-US-00535 a099.pep 1 MLGRASMMRL PDIVGVELNG KRKAGITATD
IVLALTEFLR KERVVGAFVE 51 FFGEGARSLS IGDRATISNM TPEFGATAAM
FAIDEQTIDY LKLTGRDDAQ 101 VKLVETYAKT AGLWADALKT AVYPRVLKFD
LSSVTRNMAG PSNPHARFAT 151 ADLAGKGLAK PYEEPSDGQM PDGAVIIAAI
TSCTNTSNPR NVVAAALLAR 201 NANRLGLQRK PWVKSSFAPG SKVAEIYLKE
ADLLPEMEKL GFGIVAFACT 251 TCNGMSGALD PKIQKEIIDR DLYATAVLSG
NRNFDGRIHP YAKQAFLASP 301 PLVVAYALAG SIRFDIENDV LGVADGKEIR
LKDIWPTDEE IDAIVAEYVK 351 PQQFRDVYIP MFDTGTAQKA PSPLYDWRPM
STYIRRPPYW EGALAGERTL 401 SGMRPLAILP DNITTDHLSP SNAILASSAA
GEYLAKMGLP EEDFNSYATH 451 RGDHLTAQRA TFANPKLFNE MVRNEDGSVR
QGSLARVEPE GQTMRMWEAI 501 ETYMNRKQPL IIIAGADYGQ GSSRDWAAKG
VRLAGVEAIV AEGFERIHRT 551 NLIGMGVLPL QFKPGTNRHT LQLDGTETYD
VVGERTPRCD LTLVIHRKNG 601 ETVEVPITCR LDTAEEVLVY EAGGVLQRFA
QDFLEGNAA* m099/a099 97.5% identity in 639 aa overlap 10 20 30 40
50 60 m099.pep
MLGRASMMRLPDIVGVELNGKRQAGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLS
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| a099
MLGRASMMRLPDIVGVELNGKRKAGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLS 10 20
30 40 50 60 70 80 90 100 110 120 m099.pep
IGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVETYAKTAGLWADALKT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a099
IGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVETYAKTAGLWADALKT 70 80
90 100 110 120 130 140 150 160 170 180 m099.pep
AVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYEEPSDGQMPDGSVIIAAI
||||||||||||||||||||||||||||||||||:||||||||||||||||||:|||||| a099
AVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAGKGLAKPYEEPSDGQMPDGAVIIAAI 130
140 150 160 170 180 190 200 210 220 230 240 m099.pep
TSCTNTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGSKVAETYLKEAGLLPEMEKL
|||||||||||||||||||||||||||:||||||||||||||||||||||| |||||||| a099
TSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGSKVAEIYLKEADLLPEMEKL 190
200 210 220 230 240 250 260 270 280 290 300 m099.pep
GFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a099
GFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASP 250
260 270 280 290 300 310 320 330 340 350 360 m099.pep
PLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPADEEIDAVVAEYVKPQQFRDVYVP
||||||||||||||||||||||||||||||||||||:||||||:||||||||||||||:| a099
PLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPTDEEIDAIVAEYVKPQQFRDVYIP 310
320 330 340 350 360 370 380 390 400 410 420 m099.pep
MFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALAGERTLRGMRPLAILPDNITTDHLSP
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| a099
MFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALAGERTLSGMRPLAILPDNITTDHLSP 370
380 390 400 410 420 430 440 450 460 470 480 m099.pep
SNAILAVSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVR ||||||
|||||||||||||||||||||||||||||||||||||||||||||:||||||| a099
SNAILASSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVRNEDGSVR 430
440 450 460 470 480 490 500 510 520 530 540 m099.pep
QGSFARVEPEGETMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIV
|||:|||||||:|||||||||||||||||||||||||||||||||||||||||||||||| a099
QGSLARVEPEGQTMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIV 490
500 510 520 530 540 550 560 570 580 590 600 m099.pep
AEGFERIHRTNLIGMGVLPLQFKPDTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNG
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| a099
AEGFERIHRTNLIGMGVLPLQFKPGTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNG 550
560 570 580 590 600 610 620 630 640 m099.pep
ETVEVPVTCCLDTAEEVLVYEAGGVLQRFAQDFLEGNAAX ||||||:||
|||||||||||||||||||||||||||||| a099
ETVEVPITCRLDTAEEVLVYEAGGVLQRFAQDFLEGNAAX 610 620 630 640
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 357>:
TABLE-US-00536 g102.seq 1 AtgtCCGCCA AAactccgtc gctcttcggc
ggcgcgatga Ttatcgccgg 51 gaaggttatc ggcgcAGgta tgttccccaa
ccccaccgcc aacttggggg 101 acgggttaat aggctcgctg attgtgctgc
tgtacacctg gtttccattc 151 tcctccggcg ccctcatgat tttggaagtc
aacacccata acCCccgagg 201 ggcaAGtttt gacaccATGg tcAAagacct
gctcgGaCGc ggctggaaca 251 tcatcaacgg catcgccgtc gctttggTCc
tatacggctc gacctacgcg 301 tacattttag tcggcggtga cctGACCGCC
AAAGGCAtcg GCAgCGCAGT 351 AGGCGGCAAA ATTTCgctca CCGTCGGACA
actcgtcttc tTCGGCATCC 401 TCGCCTTTTG CGTATGGGCA TCCGCACGCT
TGGTCGACCG CTTTACCGGC 451 GTCCTCATCG GCGGCATGGT ATTAACCTTT
ATTTGGGCAA CCGGCGGCCT 501 GGTTGCCGAT GCCAAACCGT CCGTCCTCTT
CGACACCCAA GCCCCCGTCG 551 GCACCGGCTA CTGGATTTAC GCCGCCACCG
CCCTGCCCGT CTGCCTCGCT 601 TCCTTCGGCT TCCACGGCAA CGTTTCCAGC
CTGCTCAAAT ACTTTAAAGG 651 CGACGcgcCc aaagtGgCGA aATCcatctg
gGcaggtaca ttggTTGCCt 701 tggtaattta cgtccTCTgg caaaccgcca
tCcaaagcaa ccTGCcgcgc 751 aacgagttcg cCCCcgtgat tgccgccgag
aggcaactCT CCGTCCTgaa 801 tgaaacccTG tccaaattcg cccaaaccgg
cgatatggat aAaatattgt 851 ccctatttcc ctacatggca atcgccacct
cctttttagg cgTAACctta 901 ggcctgtttg acaacatcgc cgacatcttc
aaatggaacg acagtatgtc 951 cgggcggggc accaaaaccg tcgcgctgaa
cttcctgccg CCCCtgattt 1001 cctggctgct cctccccacc ggcttcttta
ccgccattgg tgcgtccggc 1051 ctggcggcaa ccgtctggga ccaagGcatc
atccccgcca tgctgctcta 1101 cgtttccccc caaaaaattG gcGcaggcaa
gacttataAa gtttaCGGCG 1151 gcttgtggct gatgttagtc ttccttttcg
gcatcgccaa catcgccgca 1201 CAGGTATTGA GccaAatgGa ACtcgtCccc
GTATTTAAAG GATAA
This corresponds to the amino acid sequence <SEQ ID 358; ORF
102.ng>:
TABLE-US-00537 g102.pep 1 MSAKTPSLFG GAMIIAGKVI GAGMFPNPTA
NLGDGLIGSL IVLLYTWFPF 51 SSGALMILEV NTHNPRGASF DTMVKDLLGR
GWNIINGIAV ALVLYGSTYA 101 YILVGGDLTA KGIGSAVGGK ISLTVGQLVF
FGILAFCVWA SARLVDRFTG 151 VLIGGMVLTF IWATGGLVAD AKPSVLFDTQ
APVGTGYWIY AATALPVCLA 201 SFGFHGNVSS LLKYFKGDAP KVAKSIWAGT
LVALVIYVLW QTAIQSNLPR 251 NEFAPVIAAE RQLSVLNETL SKFAQTGDMD
KILSLFPYMA IATSFLGVTL 301 GLFDNIADIF KWNDSMSGRG TKTVALNFLP
PLISWLLLPT GFFTAIGASG 351 LAATVWDQGI IPAMLLYVSP QKIGAGKTYK
VYGGLWLMLV FLFGIANIAA 401 QVLSQMELVP VFKG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 359>:
TABLE-US-00538 m102.seq 1 ATGCCCAACA AAACCCCTTC ACTGTTCGGC
GGCGCGATGA TTATCGCCGG 51 CACGGTCATC GGCGCAGGCA TGCTCGCCAA
CCCGACCGCC ACATCCGGCG 101 TATGGTTTAC CGGCTCGCTG GCCGTGTTGC
TGTACACCTG GTTTTCTATG 151 CTTTCCAGCG GCCTGATGAT TTTGGAAGTC
AACACCCATT ATCCGCACGG 201 CGCAAGTTTC GACACGATGG TCAAAGACCT
GCTCGGACGC GGCTGGAACA 251 TCATCAACGG CATCGCCGTC GCCTTCGTTT
TATACCTGCT TACTTACGCT 301 TATATCTTCG TCGGCGGCGA CCTGACCGCC
AAAGGCTTAG GCAGCGCGGC 351 AGGCGGCGAC GTTTCACTCA CCGTCGGACA
ACTCGTCTTC TTCGGCATCC 401 TCGCCTTTTG CGTATGGGCA TCCGCACGCT
TGGTCGACCG CTTCACCGGC 451 GTCCTTATCG GCGGCATGGT ATTGACCTTT
ATTTGGGCGG CCGGCGGGCT 501 GATTGCCGAT GCCAAGCCGT CCGTCCTCTT
CGATACCCAA GCCCCCGCCG 551 GCACAAACTA CTGGATTTAC GCCGCCACCG
CCCTGCCCGT CTGCCTCGCT 601 TCCTTCGGCT TCCACGGCAA CGTCTCCAGC
CTGCTCAAAT ACTTTAAAGG 651 CGACGCGCCC AAAGTGGCTA AATCCATCTG
GACGGGCACA CTGATTGCGC 701 TGGTAATTTA CGTCCTCTGG CAAACCGCCA
TCCAAGGCAA CCTGCCGCGC 751 AACGAGTTCG CCCCCGTCAT CGCCGCCGAA
GGGCAAGTCT CCGTCCTCAT 801 CGAAACCCTG TCCAAATTCG CCCAAACCGG
CAATATGGAC AAAATATTGT 851 CCCTGTTTTC CTATATGGCG ATCGCCACCT
CGTTTTTAGG CGTAACGCTC 901 GGACTCTTCG ACTACATCGC CGACATCTTC
AAATGGAACG ACAGCATCTC 951 CGGCCGCACC AAAACCGCCG CGCTGACCTT
CCTGCCGCCC CTGATTTCCT 1001 GCCTGCTCTT CCCCACCGGC TTCGTTACCG
CCATCGGCTA CGTCGGCCTG 1051 GCGGCAACCG TCTGGACAGG CATCATCCCC
GCCATGCTGC TCTACCGTTC 1101 GCGCAAAAAA TTCGGCGCAG GCAAAACCTA
TAAAGTTTAC GGCGGCTTGT 1151 GGCTGATGGT TTGGGTCTTC CTTTTCGGCA
TCGTCAACAT CGCCGCACAG 1201 GTATTGAGCC AAATGGAACT CGTCCCCGTA
TTTAAAGGAT AA
This corresponds to the amino acid sequence <SEQ ID 360; ORF
102>:
TABLE-US-00539 m102.pep.. 1 MPNKTPSLFG GAMIIAGTVI GAGMLANPTA
TSGVWFTGSL AVLLYTWFSM 51 LSSGLMILEV NTHYPHGASF DTMVKDLLGR
GWNIINGIAV AFVLYLLTYA 101 YIFVGGDLTA KGLGSAAGGD VSLTVGQLVF
FGILAFCVWA SARLVDRFTG 151 VLIGGMVLTF IWAAGGLIAD AKPSVLFDTQ
APAGTNYWIY AATALPVCLA 201 SFGFHGNVSS LLKYFKGDAP KVAKSIWTGT
LIALVIYVLW QTAIQGNLPR 251 NEFAPVIAAE GQVSVLIETL SKFAQTGNMD
KILSLFSYMA IATSFLGVTL 301 GLFDYIADIF KWNDSISGRT KTAALTFLPP
LISCLLFPTG FVTAIGYVGL 351 AATVWTGIIP AMLLYRSRKK FGAGKTYKVY
GGLWLMVWVF LFGIVNIAAQ 401 VLSQMELVPV FKG* m102/g102 86.0% identity
in 415 aa overlap 10 20 30 40 50 60 m102.pep
MPNKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLLYTWFSMLSSGLMILEV |
|||||||||||||| ||||||: ||||: | : |||||||||| : |::|||||| g102
MSAKTPSLFGGAMIIAGKVIGAGMFPNPTANLGDGLIGSLIVLLYTWFPFSSGALMILEV 10 20
30 40 50 60 70 80 90 100 110 120 m102.pep
NTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYIFVGGDLTAKGLGSAAGGD |||
|:|||||||||||||||||||||||||:||| |||||:|||||||||:|||:|| g102
NTHNPRGASFDTMVKDLLGRGWNIINGIAVALVLYGSTYAYILVGGDLTAKGIGSAVGGK 70 80
90 100 110 120 130 140 150 160 170 180 m102.pep
VSLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTFIWAAGGLIADAKPSVLFDTQ
:||||||||||||||||||||||||||||||||||||||||||:|||:|||||||||||| g102
ISLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTFIWATGGLVADAKPSVLFDTQ 130
140 150 160 170 180 190 200 210 220 230 240 m102.pep
APAGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSIWTGTLIALVIYVLW
||:||:|||||||||||||||||||||||||||||||||||||||||:|||:|||||||| g102
APVGLGYWIYAATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSIWAGTLVALVIYVLW 190
200 210 220 230 240 250 260 270 280 290 300 m102.pep
QTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQTGNMDKILSLFSYMAIATSFLGVTL
|||||:|||||||||||||| |:||| ||||||||||:|||||||| ||||||||||||| g102
QTAIQSNLPRNEFAPVIAAERQLSVLNETLSKFAQTGDMDKILSLFPYMAIATSFLGVTL 250
260 270 280 290 300 310 320 330 340 350 m102.pep
GLFDYIADIFKWNDSISGR-TKTAALTFLPPLISCLLFPTGFVTAIGYVGLAATVWT-GI ||||
||||||||||:||| |||:||:||||||| ||:|||| |||| ||||||| || g102
GLFDNIADIFKWNDSMSGRGTKTVALNFLPPLISWLLLPTGFFTAIGASGLAATVWDQGI 310
320 330 340 350 360 360 370 380 390 400 410 m102.pep
IPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLFGIVNIAAQVLSQMELVPVFKGX ||||||| |
:|:|||||||||||||||: ||||||:||||||||||||||||||| g102
IPAMLLYVSPQKIGAGKTYKVYGGLWLML-VFLFGIANIAAQVLSQMELVPVFKGX 370 380
390 400 410
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 361>:
TABLE-US-00540 a102.seq 1 ATGCCCACCA AAACCCCTTC ACTGTTCGGC
GGCGCGATGA TTATCGCCGG 51 CACGNTCATC GGCGCAGGTA TGCTCGCCAA
CCCGACCGCC ACATCCGGCG 101 TATGGTTTAC CGGCTCGCTG GCCGTGTTGC
TGTACACCTG GTTTTCCATG 151 CTCTCCAGCG GCCTGATGAT TTTGGAAGTC
AACACCCACT ACCCCCACGG 201 CGCGANCTTC GACACCATGG TTAAAGACCT
GCTCGGACGG AGCTGGAACA 251 TCATCAACGG CATCGCCGTC GCCTTCGTTT
TATACCTGCT TACTTACGCT 301 TATATCTTCG TCGGCGGCGA CCTGACCGCC
AAAGGCTTAG GCAGCGCGGC 351 AGGCGGCAAT GTTTCACTCA CCGTCGGACA
ACTCGTCTTC TTCGGCATTC 401 TCGCCTTTTG CGTATGGGCA TCCGCACGCT
TGGTCGACCG ATTCACCAGC 451 GTCCTCATCG GCGGCATGGT ATTAACCTTT
ATTTGGGCAA CCGGCGGCCT 501 GATTGCCGAT GCCAAACTGC CCGTCCTCTT
CGACACCCAA GCCCCTACCG 551 GCACCAACTA CTGGATTTAT GTCGCCACCG
CCCTGCCCGT CTGCCTTGCG 601 TCATTCGGTT TCCACGGCAA CGTCTCCAGC
CTGCTCAAAT ACTTTAAAGG 651 CGACGCGCCC AAAGTGGCTA AATCCATCTG
GACGGGCACA CTGATTGCGC 701 TGGTAATTTA CGTCCTCTGG CAAACCGCCA
TCCAANGCAA CCTGCCGCGC 751 AACGAGTTCG CCCCCGTGAT TGCCGCCGAA
GGGCAAGTCT CCGTCNTGAT 801 TGAAACCCTG TCCAAATTCG CCCAAACCGG
CAATATGGAC AAAATATTGT 851 CCCTGTTTTC CTATATGGCG ATCGCCACCT
CGTTTTTAGG CGTAACGCTC 901 GGACTCTTCG ACTACATCGC CGACATCTTC
AAATGGAACG ACAGCGTGTC 951 CGGCCGCACC AAAACCGCCG CGCTGACCTT
CCTGCCGCCT NTAATTTCCT 1001 GCCTGCTCTT CCCCACCGGC TTTGTTACCG
CCATCGGNTA CGTCGGCCTG 1051 GCGGCAACCG TCTGGACAGG CATCATCCCC
GCCATGCTGC TNTACCGTTC 1101 GCGCAAAAAA TTCGGCGCAG GCAAAACCTA
TAAAGTTTAC GGCGGCTTGT 1151 GGCTGATGGT TTGGGTCTTC CTTTTCGGCA
TCNTCAACAT CGCCGCACAN 1201 GTATTGAGCC AAATGGAACT CGTCCCCGTA
TTTAAAGGAT AA 1202
This corresponds to the amino acid sequence <SEQ ID 362; ORF
102.a>:
TABLE-US-00541 a102.pep 1 MPTKTPSLFG GAMIIAGTXI GAGMLANPTA
TSGVWFTGSL AVLLYTWFSM 51 LSSGLMILEV NTHYPHGAXF DTMVKDLLGR
SWNIINGIAV AFVLYLLTYA 101 YIFVGGDLTA KGLGSAAGGN VSLTVGQLVF
FGILAFCVWA SARLVDRFTS 151 VLIGGMVLTF IWATGGLIAD AKLPVLFDTQ
APTGTNYWIY VATALPVCLA 201 SFGFHGNVSS LLKYFKGDAP KVAKSIWTGT
LIALVIYVLW QTAIQXNLPR 251 NEFAPVIAAE GQVSVXIETL SKFAQTGNMD
KILSLFSYMA IATSFLGVTL 301 GLFDYIADIF KWNDSVSGRT KTAALTFLPP
XISCLLFPTG FVTAIGYVGL 351 AATVWTGIIP AMLLYRSRKK FGAGKTYKVY
GGLWLMVWVF LFGIXNIAAX 401 VLSQMELVPV FKG* m102/a102 95.9% identity
in 413 aa overlap 10 20 30 40 50 60 m102.pep
MPNKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLLYTWFSMLSSGLMILEV
||:||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| a102
MPTKTPSLFGGAMIIAGTXIGAGMLANPTATSGVWFTGSLAVLLYTWFSMLSSGLMILEV 10 20
30 40 50 60 70 80 90 100 110 120 m102.pep
NTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYIFVGGDLTAKGLGSAAGGD
|||||||| |||||||||||:||||||||||||||||||||||||||||||||||||||: a102
NTHYPHGAXFDTMVKDLLGRSWNIINGIAVAFVLYLLTYAYIFVGGDLTAKGLGSAAGGN 70 80
90 100 110 120 130 140 150 160 170 180 m102.pep
VSLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTFIWAAGGLIADAKPSVLFDTQ
|||||||||||||||||||||||||||||:|||||||||||||:|||||||| |||||| a102
VSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTFIWATGGLIADAKLPVLFDTQ 130
140 150 160 170 180 190 200 210 220 230 240 m102.pep
APAGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSIWTGTLIALVIYVLW
||:|||||||:||||||||||||||||||||||||||||||||||||||||||||||||| a102
APTGTNYWIYVATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSIWTGTLIALVIYVLW 190
200 210 220 230 240 250 260 270 280 290 300 m102.pep
QTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQTGNMDKILSLFSYMAIATSFLGVTL |||||
||||||||||||||||||| |||||||||||||||||||||||||||||||||| a102
QTAIQXNLPRNEFAPVIAAEGQVSVXIETLSKFAQTGNMDKILSLFSYMAIATSFLGVTL 250
260 270 280 290 300 310 320 330 340 350 360 m102.pep
GLFDYIADIFKWNDSISGRTKTAALTFLPPLISCLLFPTGFVTAIGYVGLAATVWTGIIP
|||||||||||||||:|||||||||||||| ||||||||||||||||||||||||||||| a102
GLFDYIADIFKWNDSVSGRTKTAALTFLPPXISCLLFPTGFVTAIGYVGLAATVWTGIIP 310
320 330 340 350 360 370 380 390 400 410 102.pep
AMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLFGIVNIAAQVLSQMELVPVFKGX
|||||||||||||||||||||||||||||||||| |||| |||||||||||||| a102
AMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLFGIXNIAAXVLSQMELVPVFKGX 370 380 390
400 410
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 363>:
TABLE-US-00542 g105.seq 1 Atgtccgcag aaaCATACAc acAAAtcggc
tGGgtaggct taggGcaaat 51 gGgtctgcct atgGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCcgc CAAAGGAGCA 151 AAAGTTTACG GCagcACCGC CGAACTCGTC
CGCGCCTGCC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAA ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAACC TCGCCGTCAA AGCACTTGTC
GAAGCCGCAG GCGGACAGTT 351 TGCCGAAGCA CCCGTTTCCG GATCGGTCGG
ACCCGCCACC AACGGCACAC 401 TGCTGATTCT GTTCGGCGGC AGCGAAGCCG
TTTTAAACCC GCTGCAAAAA 451 ATATTTTCCC TTGTCGGCAA AAAAACCTTC
CATTTCGGCG ATGTCGGCAA 501 AGGCTCGGGC GCGAAACTCG TCTTGAACTC
GCTCTTAGGC ATTTTCGGCG 551 AAGCGTACAG CGAAGCGATG CTGATGGCGC
GGCAGTTCGG CATCGATACC 601 GACACCATCG TCGAAGCCAT CGGCGGCTCG
GCAATGGACT CGCCTATGTT 651 TCAAACAAAA AAATCACTAT GGGCAAACCG
TGAGTTCCCC CCTGCCTTTG 701 CACTCAAACA CGCTTCCAAA GAcctTAACC
TCGccgtcAA AGAGCTTGAA 751 CAGGCAGGCA ACACCCTGCC CGCCGTCGAA
ACCGTTGCTG CCAGCTACCG 801 CAAAGCAGTT GAAGCCGGCT ACGGCGAACA
GGACGTTTCC GGCGTTTACC 851 TGAAATTGGC AGAACACTGA
This corresponds to the amino acid sequence <SEQ ID 364; ORF
105.ng>:
TABLE-US-00543 g105.pep 1 MSAETYTQIG WVGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGSTAELV RACPVIFLMV SDYAAVCDIL
NGVRDGLAGK IIVNMSTISP 101 TENLAVKALV EAAGGQFAEA PVSGSVGPAT
NGTLLILFGG SEAVLNPLQK 151 IFSLVGKKTF HFGDVGKGSG AKLVLNSLLG
IFGEAYSEAM LMARQFGIDT 201 DTIVEAIGGS AMDSPMFQTK KSLWANREFP
PAFALKHASK DLNLAVKELE 251 QAGNTLPAVE TVAASYRKAV EAGYGEQDVS
GVYLKLAEH
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 365>:
TABLE-US-00544 m105.seq 1 ATGTCCGCAA ACGAATACGC ACAAATCGGC
TGGaTAGGCT TAGGGCAAAT 51 GGGTCTGCCT ATGGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCCGC CAAAGGCGCA 151 AAAGTTTACG GCAACACCGC CGAACTCGTC
CGCGACTATC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAm ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAaGC TCGCCGTCAA AGCACTTGTC
GAAGCGCAGm GaCAGTTTGC 351 CGAAGCACCC GTTTCCGGAT CGGTCGGGCC
CGCCACCAAC GGCACGCTGC 401 TGATTCTGTT CGGCGGCAGC GAAcCGtTTT
AAACCCGCTG CAAAAAATAT 451 TTTCCCTCGT CGGCAAAAAA ACCTTCCATT
TCGGCGATGT CGGCAAAGGT 501 TCGGGCGCGA AACTCGTCTT GAACTCGCTC
TTGGGCATTT TCGGCGAaCG 551 TAcAGCGAAs GmTgCTGATG GCGCGGCAGT
TCGGCATCGA TACCGACACC 601 ATCGTCGAAG CCATCGGsGA CTCGGCAATG
GACTCGCCCA TGTTCCAAAC 651 CAAAAAATCC CTGTGGGCAA ACCGCGAATT
CCCGmCCGmC TTCGCCCTCA 701 AACACGCCTC CAAAGACCTC AACCTCGCCG
TCAAAGAGCT TGAACAGGCA 751 GGCAACACCC TGCCCGCCGT CGAAACCGTT
GCTGCCAGCT ACCGCAAAGC 801 AGTCGAAGCC GGCTACGGGA CACAGGACGT
TTCCGGCGTT TACCTGAAAC 851 TGGCAGAACA CTGA
This corresponds to the amino acid sequence <SEQ ID 366; ORF
105>:
TABLE-US-00545 m105.pep 1 MSANEYAQIG WIGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGNTAELV RDYPVIFLMV SDYAAVCDIL
NGVRDGLAGX IIVNMSTISP 101 TEKLAVKALV EAQRQFAEAP VSGSVGPATN
GTLLILFGGS EPFXTRCKKY 151 FPSSAKKPSI SAMSAKVRAR NSSXTRSWAF
SANVQRXXLM ARQFGIDTDT 201 IVEAIGDSAM DSPMFQTKKS LWANREFPXX
FALKHASKDL NLAVKELEQA 251 GNTLPAVETV AASYRKAVEA GYGTQDVSGV
YLKLAEH
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 105
shows 79.9% identity over a 289 aa overlap with a predicted ORF
(ORF 105.ng) from N. gonorrhoeae:
TABLE-US-00546 m105/g105 10 20 30 40 50 60 g105.pep
MSAETYTQIGWVGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGSTAELV |||:
|:||||:||||||||||||||||||||||||||||||||||||||||||:||||| m105
MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV 10 20
30 40 50 60 70 80 90 100 110 120 g105.pep
RACPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA |
|||||||||||||||||||||||||| ||||||||||||:||||||||| ||||| m105
RDYPVIFLMVSDYAAVCDILNGVRDGLAGXIIVNMSTISPTEKLAVKALVEAQR-QFAEA 70 80
90 100 110 130 140 150 160 170 180 g105.pep
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG
|||||||||||||||||||||| : :| | :|| :: :: |: : m105
PVSGSVGPATNGTLLILFGGSEPFXTRCKKYFPSSAKKP-SISAMSAKVRARNSSXTRSW 120
130 140 150 160 170 190 200 210 220 230 240 g105.pep
IFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQTKKSLWANREFPPAFALKHASK |: ::
|||||||||||||||||| ||||||||||||||||||||| |||||||| m105
AFSANVQRXXLMARQFGIDTDTIVEAIGDSAMDSPMFQTKKSLWANREFPXXFALKHASK 180
190 200 210 220 230 250 260 270 280 289 g105.pep
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEH
||||||||||||||||||||||||||||||||||| ||||||||||||| m105
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGTQDVSGVYLKLAEH 240 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 367>:
TABLE-US-00547 a105.seq 1 ATGTCCGCAA ACGAATACAC ACAAATCGGC
TGGATAGGCT TAGGGCAAAT 51 GGGTCTGCCT ATGGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCCGC CAAAGGCGCA 151 AAAGTTTACG GCAACACCGC CGAACTCGTC
CGCGACTATC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAA ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAACC TCGCCGTCAA AGCACTTGTC
GAAGCCGCAG GCGGACAGTT 351 TGCCGAAGCA CCCGTTTCCG GATCGGTCGG
GCCCGCCACC AACGGCACGC 401 TGCTGATTCT GTTCGGCGGC AGCGAAGCCG
TTTTAAACCC GCTGCAAAAA 451 ATATTTTCCC TCGTCGGCAA AAAAACCTTC
CATTTCGGCG ATGTCGGCAA 501 AGGTTCGGGC GCGAAACTCG TCTTGAACTC
GCTCTTGGGC ATTTTCGGCG 551 AAGCGTACAG CGAAGCGATG CTGATGGCGC
GGCAGTTCGG CATCGATACC 601 GACACCATCG TCGAAGCCAT CGGCGGCTCG
GCAATGGACT CGCCCATGTT 651 CCAAACCAAA AAATCCCTGT GGGCAAACCG
CGAATTCCCA CCCGCCTTCG 701 CCCTCAAACA CGCCTCCAAA GACCTCAACC
TCGCCGTCAA AGAGCTTGAA 751 CAGGCAGGCA ACACCCTGCC CGCCGTCGAA
ACCGTTGCTG CCAGCTACCG 801 CAAAGCAGTC GAAGCCGGCT ACGGCGAACA
GGACGTTTCC GGCGTTTACC 851 TGAAATTGGC AGAACACTGA
This corresponds to the amino acid sequence <SEQ ID 368; ORF
105.a>:
TABLE-US-00548 a105.pep 1 MSANEYTQIG WIGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGNTAELV RDYPVIFLMV SDYAAVCDIL
NGVRDGLAGK IIVNMSTISP 101 TENLAVKALV EAAGGQFAEA PVSGSVGPAT
NGTLLILFGG SEAVLNPLQK 151 IFSLVGKKTF HFGDVGKGSG AKLVLNSLLG
IFGEAYSEAM LMARQFGIDT 201 DTIVEAIGGS AMDSPMFQTK KSLWANREFP
PAFALKHASK DLNLAVKELE 251 QAGNTLPAVE TVAASYRKAV EAGYGEQDVS
GVYLKLAEH* m105/a105 96.5% identity in 289 aa overlap 10 20 30 40
50 60 m105.pep
MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a105
MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV 10 20
30 40 50 60 70 80 90 100 110 119 m105.pep
RDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAG-QFAEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| a105
RDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA 70 80
90 100 110 120 120 130 140 150 160 170 179 m105.pep
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a105
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG 130
140 150 160 170 180 180 190 200 210 220 230 m105.pep
IFGDV-QRXMLMARQFGIDTDTIVEAIGDSAMDSPMFQTKKSLWANREFPXAFALKHASK |||::
:: ||||||||||||||||||| ||||||||||||||||||||| ||||||||| a105
IFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQTKKSLWANREFPPAFALKHASK 190
200 210 220 230 240 240 250 260 270 280 m105.pep
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX
|||||||||||||||||||||||||||||||||||||||||||||||||| a105
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX 250 260 270 280
290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 369>:
TABLE-US-00549 g105-1.seq 1 ATGTCCGCAG AAACATACAC ACAAATCGGC
TGGGTAGGCT TAGGGCAAAT 51 GGGTCTGCCT ATGGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCCGC CAAAGGAGCA 151 AAAGTTTACG GCAGCACCGC CGAACTCGTC
CGCGCCTGCC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAA ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAACC TCGCCGTCAA AGCACTTGTC
GAAGCCGCAG GCGGACAGTT 351 TGCCGAAGCA CCCGTTTCCG GATCGGTCGG
ACCCGCCACC AACGGCACAC 401 TGCTGATTCT GTTCGGCGGC AGCGAAGCCG
TTTTAAACCC GCTGCAAAAA 451 ATATTTTCCC TTGTCGGCAA AAAAACCTTC
CATTTCGGCG ATGTCGGCAA 501 AGGCTCGGGC GCGAAACTCG TCTTGAACTC
GCTCTTAGGC ATTTTCGGCG 551 AAGCGTACAG CGAAGCGATG CTGATGGCGC
GGCAGTTCGG CATCGATACC 601 GACACCATCG TCGAAGCCAT CGGCGGCTCG
GCAATGGACT CGCCTATGTT 651 TCAAACAAAA AAATCACTAT GGGCAAACCG
TGAGTTCCCC CCTGCCTTTG 701 CACTCAAACA CGCTTCCAAA GACCTTAACC
TCGCCGTCAA AGAGCTTGAA 751 CAGGCAGGCA ACACCCTGCC CGCCGTCGAA
ACCGTTGCTG CCAGCTACCG 801 CAAAGCAGTT GAAGCCGGCT ACGGCGAACA
GGACGTTTCC GGCGTTTACC 851 TGAAATTGGC AGAACACTGA
This corresponds to the amino acid sequence <SEQ ID 370; ORF
105-1.ng>:
TABLE-US-00550 g105-1.pep 1 MSAETYTQIG WVGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGSTAELV RACPVIFLMV SDYAAVCDIL
NGVRDGLAGK IIVNMSTISP 101 TENLAVKALV EAAGGQFAEA PVSGSVGPAT
NGTLLILFGG SEAVLNPLQK 151 IFSLVGKKTF HFGDVGKGSG AKLVLNSLLG
IFGEAYSEAM LMARQFGIDT 201 DTIVEAIGGS AMDSPMFQTK KSLWANREFP
PAFALKHASK DLNLAVKELE 251 QAGNTLPAVE TVAASYRKAV EAGYGEQDVS
GVYLKLAEH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 371>:
TABLE-US-00551 m105-1.seq 1 ATGTCCGCAA ACGAATACGC ACAAATCGGC
TGGATAGGCT TAGGGCAAAT 51 GGGTCTGCCT ATGGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCCGC CAAAGGCGCA 151 AAAGTTTACG GCAACACCGC CGAACTCGTC
CGCGACTATC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAA ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAACC TCGCCGTCAA AGCACTTGTC
GAAGCCGCAG GCGGACAGTT 351 TGCCGAAGCA CCCGTTTCCG GATCGGTCGG
GCCCGCCACC AACGGCACGC 401 TGCTGATTCT GTTCGGCGGC AGCGAAGCcG
TTTTAAACCC GCTGCAAAAA 451 ATATTTTCCC TCGTCGGCAA AAAAACCTTC
CATTTCGGCG ATGTCGGCAA 501 AGGTTCGGGC GCGAAACTCG TCTTGAACTC
GCTCTTGGGC ATTTTCGGCG 551 AAGCGTACAG CGAAnCGATG CTGATGGCGC
GGCAGTTCGG CATCGATACC 601 GACACCATCG TCGAAGCCAT CGGsGACTCG
GCAATGGACT CGCCCATGTT 651 CCAAACCAAA AAATCCCTGT GGGCAAACCG
CGAATTCCCG CCCGCCTTCG 701 CCCTCAAACA CGCCTCCAAA GACCTCAACC
TCGCCGTCAA AGAGCTTGAA 751 CAGGCAGGCA ACACCCTGCC CGCCGTCGAA
ACCGTTGCTG CCAGCTACCG 801 CAAAGCAGTC GAAGCCGGCT ACGGCGAACA
GGACGTTTCC GGCGTTTACC 851 TGAAACTGGC AGAACACTGA
This corresponds to the amino acid sequence <SEQ ID 372; ORF
105-1>:
TABLE-US-00552 m105-1.pep 1 MSANEYAQIG WIGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGNTAELV RDYPVIFLMV SDYAAVCDIL
NGVRDGLAGK IIVNMSTISP 101 TENLAVKALV EAAGGQFAEA PVSGSVGPAT
NGTLLILFGG SEAVLNPLQK 151 IFSLVGKKTF HFGDVGKGSG AKLVLNSLLG
IFGEAYSEXM LMARQFGIDT 201 DTIVEAIGDS AMDSPMFQTK KSLWANREFP
PAFALKHASK DLNLAVKELE 251 QAGNTLPAVE TVAASYRKAV EAGYGEQDVS
GVYLKLAEH* m105-1/g105-1 96.9% identity in 289 aa overlap 10 20 30
40 50 60 m105-1.pep
MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV |||:
|:||||:||||||||||||||||||||||||||||||||||||||||||:||||| g105-1
MSAETYTQIGWVGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGSTAELV 10 20
30 40 50 60 70 80 90 100 110 120 m105-1.pep
RDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g105-1
RACPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA 70 80
90 100 110 120 130 140 150 160 170 180 m105-1.pep
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g105-1
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG 130
140 150 160 170 180 190 200 210 220 230 240 m105-1.pep
IFGEAYSEXMLMARQFGIDTDTIVEAIGDSAMDSPMFQTKKSLWANREFPPAFALKHASK
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| g105-1
IFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQTKKSLWANREFPPAFALKHASK 190
200 210 220 230 240 250 260 270 280 290 m105-1.pep
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX
|||||||||||||||||||||||||||||||||||||||||||||||||| g105-1
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX 250 260 270 280
290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 373>:
TABLE-US-00553 a105-1.seq 1 ATGTCCGCAA ACGAATACAC ACAAATCGGC
TGGATAGGCT TAGGGCAAAT 51 GGGTCTGCCT ATGGTAACGC GGCTCTTGGA
CGGCGGCATC GAAGTCGGCG 101 TATACAACCG CTCGCCCGAC AAAACTGCCC
CCATCTCCGC CAAAGGCGCA 151 AAAGTTTACG GCAACACCGC CGAACTCGTC
CGCGACTATC CCGTCATTTT 201 CCTGATGGTT TCCGACTATG CCGCCGTGTG
CGACATCCTG AACGGAGTCC 251 GCGACGGATT GGCCGGCAAA ATCATCGTCA
ACATGAGCAC CATCTCCCCG 301 ACCGAAAACC TCGCCGTCAA AGCACTTGTC
GAAGCCGCAG GCGGACAGTT 351 TGCCGAAGCA CCCGTTTCCG GATCGGTCGG
GCCCGCCACC AACGGCACGC 401 TGCTGATTCT GTTCGGCGGC AGCGAAGCCG
TTTTAAACCC GCTGCAAAAA 451 ATATTTTCCC TCGTCGGCAA AAAAACCTTC
CATTTCGGCG ATGTCGGCAA 501 AGGTTCGGGC GCGAAACTCG TCTTGAACTC
GCTCTTGGGC ATTTTCGGCG 551 AAGCGTACAG CGAAGCGATG CTGATGGCGC
GGCAGTTCGG CATCGATACC 601 GACACCATCG TCGAAGCCAT CGGCGGCTCG
GCAATGGACT CGCCCATGTT 651 CCAAACCAAA AAATCCCTGT GGGCAAACCG
CGAATTCCCA CCCGCCTTCG 701 CCCTCAAACA CGCCTCCAAA GACCTCAACC
TCGCCGTCAA AGAGCTTGAA 751 CAGGCAGGCA ACACCCTGCC CGCCGTCGAA
ACCGTTGCTG CCAGCTACCG 801 CAAAGCAGTC GAAGCCGGCT ACGGCGAACA
GGACGTTTCC GGCGTTTACC 851 TGAAATTGGC AGAACACTGA
This corresponds to the amino acid sequence <SEQ ID 374; ORF
105-1.a>:
TABLE-US-00554 a105-1.pep 1 MSANEYTQIG WIGLGQMGLP MVTRLLDGGI
EVGVYNRSPD KTAPISAKGA 51 KVYGNTAELV RDYPVIFLMV SDYAAVCDIL
NGVRDGLAGK IIVNMSTISP 101 TENLAVKALV EAAGGQFAEA PVSGSVGPAT
NGTLLILFGG SEAVLNPLQK 151 IFSLVGKKTF HFGDVGKGSG AKLVLNSLLG
IFGEAYSEAM LMARQFGIDT 201 DTIVEAIGGS AMDSPMFQTK KSLWANREFP
PAFALKHASK DLNLAVKELE 251 QAGNTLPAVE TVAASYRKAV EAGYGEQDVS
GVYLKLAEH* a105-1/m105-1 99.0% identity in 289 aa overlap 10 20 30
40 50 60 a105-1.pep
MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| m105-1
MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAPISAKGAKVYGNTAELV 10 20
30 40 50 60 70 80 90 100 110 120 a105-1.pep
RDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m105-1
RDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTENLAVKALVEAAGGQFAEA 70 80
90 100 110 120 130 140 150 160 170 180 a105-1.pep
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m105-1
PVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTFHFGDVGKGSGAKLVLNSLLG 130
140 150 160 170 180 190 200 210 220 230 240 a105-1.pep
IFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQTKKSLWANREFPPAFALKHASK
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| m105-1
IFGEAYSEXMLMARQFGIDTDTIVEAIGDSAMDSPMFQTKKSLWANREFPPAFALKHASK 190
200 210 220 230 240 250 260 270 280 290 a105-1.pep
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX
|||||||||||||||||||||||||||||||||||||||||||||||||| m105-1
DLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGVYLKLAEHX 250 260 270 280
290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 375>:
TABLE-US-00555 g107.seq 1 ATGGTATTAA CCTTTATTTG GGCAACCGGC
GGCCTGGTTG CCGATGCCAA 51 ACCGTCCGTC CTCTTCGACA CCCAAGCCCC
CGTCGGCACC GGCTACTGGA 101 TTTACGCCGC CACCGCCCTG CCCGTCTGCC
TCGCTTCCTT CGGCTTCCAC 151 GGCAACGTTT CCAGCCTGCT CAAATACTTT
AAAGGCGACG cgcCcaaagt 201 GgCGAaATCc atctggGcag gtacattggT
TGCCttggta atttacgtcc 251 TCTggcaaac cgccatCcaa agcaaccTGC
cgcgcaacga gttcgcCCCc 301 gtgattgccg ccgagaggca actCTCCGTC
CTgaatgaaa cccTGtccaa 351 attcgcccaa accggcgata tggataAaat
attgtcccta tttccctaca 401 tggcaatcgc cacctccttt ttaggcgTAA
Ccttaggcct gtttgacaac 451 atcgccggac atcttcaaat ggaacgacag
tatgtccggg cggcaccaaa 501 accgtcgcgc tga
This corresponds to the amino acid sequence <SEQ ID 376; ORF
107.ng>:
TABLE-US-00556 g107.pep 1 MVLTFIWATG GLVADAKPSV LFDTQAPVGT
GYWIYAATAL PVCLASFGFH 51 GNVSSLLKYF KGDAPKVAKS IWAGTLVALV
IYVLWQTAIQ SNLPRNEFAP 101 VIAAERQLSV LNETLSKFAQ TGDMDKILSL
FPYMAIATSF LGVTLGLFDN 151 IAGHLQMERQ YVRAAPKPSR *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 377>:
TABLE-US-00557 m107.seq 1 ATGGTATTGA CCTTTATTTG GGCGGCCGGC
GGGCTGATTG CCGATGCCAA 51 GCCGTCCGTC CTCTTCGATA CCCAAGCCCC
CGCCGGCACA AACTACTGGA 101 TTTACGCCGs CACCGCCCTG CCCGTCTGCC
TCGCTTCCTT CGGCTTCCAC 151 GGCAACGTCT CCAGCCTGCT CAAATACTTT
AAAGGCGACG CGCCCAAAGT 201 GGCTAAATCC ATCTGGACGG GCACACTGAT
TGCGCTGGTA ATTTACGTCC 251 TCTGGCAAAC CGCCATCCAA GGCAACCTGC
CGCGCAACGA GTTCGCCCCC 301 GTCATCGCCG CCGAAGGGCA AGTCTCCGTC
CTCATCGAAA CCCTGTCCAA 351 ATTCGCCCAA ACCGGCAATA TGGACAAAAT
ATTGTCCCTG TTTTCCTATA 401 TGGCGATCGC CACCTCGTTT TTAGGCGTAA
CGCTCGGACT CTTCGACTAC 451 ATCGCCCATC TTCAAATGGA ACGACAGCAT
CTCCGGgCCG CACCAAAACC 501 GCCGCGCTGA
This corresponds to the amino acid sequence <SEQ ID 378; ORF
107>:
TABLE-US-00558 m107.pep.. 1 MVLTFIWAAG GLIADAKPSV LFDTQAPAGT
NYWIYAXTAL PVCLASFGFH 51 GNVSSLLKYF KGDAPKVAKS IWTGTLIALV
IYVLWQTAIQ GNLPRNEFAP 101 VIAAEGQVSV LIETLSKFAQ TGNMDKILSL
FSYMAIATSF LGVTLGLFDY 151 IAHLQMERQH LRAAPKPPR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 107
shows 89.4% identity over a 170 aa overlap with a predicted ORF
(ORF 107.ng) from N. gonorrhoeae:
TABLE-US-00559 m107/g107 10 20 30 40 50 60 m107.pep
MVLTFIWAAGGLIADAKPSVLFDTQAPAGTNYWIYAXTALPVCLASFGFHGNVSSLLKYF
||||||||:|||:||||||||||||||:||:||||| ||||||||||||||||||||||| g107
MVLTFIWATGGLVADAKPSVLFDTQAPVGTGYWIYAATALPVCLASFGFHGNVSSLLKYF 10 20
30 40 50 60 70 80 90 100 110 120 m107.pep
KGDAPKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQ
||||||||||||:|||:|||||||||||||:|||||||||||||| |:||| |||||||| g107
KGDAPKVAKSIWAGTLVALVIYVLWQTAIQSNLPRNEFAPVIAAERQLSVLNETLSKFAQ 70 80
90 100 110 120 130 140 150 160 170 m107.pep
TGNMDKILSLFSYMAIATSFLGVTLGLFDYIA-HLQMERQHLRAAPKPPR ||:||||||||
||||||||||||||||| || |||||||::|||||| | g107
TGDMDKILSLFPYMAIATSFLGVTLGLFDNIAGHLQMERQYVRAAPKPSR 130 140 150 160
170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 379>:
TABLE-US-00560 a107.seq 1 ATGGTATTAA CCTTTATTTG GGCAACCGGC
GGCCTGATTG CCGATGCCAA 51 ACTGCCCGTC CTCTTCGACA CCCAAGCCCC
TACCGGCACC AACTACTGGA 101 TTTATGTCGC CACCGCCCTG CCCGTCTGCC
TTGCGTCATT CGGTTTCCAC 151 GGCAACGTCT CCAGCCTGCT CAAATACTTT
AAAGGCGACG CGCCCAAAGT 201 GGCTAAATCC ATCTGGACGG GCACACTGAT
TGCGCTGGTA ATTTACGTCC 251 TCTGGCAAAC CGCCATCCAA GGCAACCTGC
CGCGCAACGA GTTCGCCCCC 301 GTGATTGCCG CCGAAGGGCA AGTCTCCGTC
CTGATTGAAA CCCTGTCCAA 351 ATTCGCCCAA ACCGGCAATA TGGACAAAAT
ATTGTCCCTG TTTTCCTATA 401 TGGCGATCGC CACCTCGTTT TTAGGCGTAA
CGCTCGGACT CTTCGACTAC 451 ATCGCCGACA TCTTCAAATG GAACGACAGC
GTGTCCGGCC GCACCAAAAC 501 CGCCGCGCTG ACCTTCCTGC CGCCTCTAAT
TTCCTGCCTG CTCTTCCCCA 551 CCGGCTTTGT TACCGCCATC GGCTACGTCG
GCCTGGCGGC AACCGTCTGG 601 ACAGGCATCA TCCCCGCCAT GCTGCTCTAC
CGTTCGCGCA AAAAATTCGG 651 CGCAGGCAAA ACCTATAAAG TTTACGGCGG
CTTGTGGCTG ATGGTTTGGG 701 TCTTCCTTTT CGGCATCGTC AACATCGCCG
CACAGGTATT GAGCCAAATG 751 GAACTCGTCC CCGTATTTAA AGGATAA
This corresponds to the amino acid sequence <SEQ ID 380; ORF
107.a>:
TABLE-US-00561 a107.pep 1 MVLTFIWATG GLIADAKLPV LFDTQAPTGT
NYWIYVATAL PVCLASFGFH 51 GNVSSLLKYF KGDAPKVAKS IWTGTLIALV
IYVLWQTAIQ GNLPRNEFAP 101 VIAAEGQVSV LIETLSKFAQ TGNMDKILSL
FSYMAIATSF LGVTLGLFDY 151 IADIFKWNDS VSGRTKTAAL TFLPPLISCL
LFPTGFVTAI GYVGLAATVW 201 TGIIPAMLLY RSRKKFGAGK TYKVYGGLWL
MVWVFLFGIV NIAAQVLSQM 251 ELVPVFKG* m107/a107 94.8% identity in 154
aa overlap 10 20 30 40 50 60 m107.pep
MVLTFIWAAGGLIADAKPSVLFDTQAPAGTNYWIYAXTALPVCLASFGFHGNVSSLLKYF
||||||||:|||||||| ||||||||:|||||||: ||||||||||||||||||||||| a107
MVLTFIWATGGLIADAKLPVLFDTQAPTGTNYWIYVATALPVCLASFGFHGNVSSLLKYF 10 20
30 40 50 60 70 80 90 100 110 120 m107.pep
KGDAPKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a107
KGDAPKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQ 70 80
90 100 110 120 130 140 150 160 170 m107.pep
TGNMDKILSLFSYMAIATSFLGVTLGLFDYIAHLQMERQHLRAAPKPPRX
|||||||||||||||||||||||||||||||| : al07
TGNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISCL 130
140 150 160 170 180 a107
LFPIGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLFGIV 190
200 210 220 230 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 381>:
TABLE-US-00562 g108.seq 1 ATGttgccgg gCTTCAACCG GATATTCAaa
cggTTTGCTC CAACACTCGG 51 AAcggCGCAT AAAACGCCgc ccTTCGCGTT
ATCCCGAACG GGGCGGCTAA 101 TCAGATCCTA TCGCCATAAA AGGCGGGGTT
TCAACCGAAA AGGAATTGAG 151 ATGAATAAAA CCTTGTCTAT TTTGCCGGCG
GCAATCTTAC TCGGCGGGTG 201 CGCCGCCGGC GGCAACACAT TCGGCAGCTT
AGACGGCGGC ACGGGTATGG 251 GTGGCAGCAT CGTCAAAATG ACGGTAGAAA
gccAATGCCG TGCGGAATTG 301 GACAGGCGCA GCGAATGGCG TTTGACCGCG
CTGGCGATGA GTGCCGAAAA 351 ACAGGCGGAA TGGGAAAACA AGATTTGCGG
CTGCGCTACC GAAGAAGCAC 401 CTAACCAGCT GACCGGCAAC GATGTGATGC
AGATGCTGAa ccagtccacG 451 CGCaatcagg cacTtgccgc CCtgaccgTC
AAAacggtTT CcgcctgcTT 501 CAaacgcctg tACCGCTAa
This corresponds to the amino acid sequence <SEQ ID 382; ORF
108.ng>:
TABLE-US-00563 g108.pep 1 MLPGFNRIFK RFAPTLGTAH KTPPFALSRT
GRLIRSYRHK RRGFNRKGIE 51 MNKTLSILPA AILLGGCAAG GNTFGSLDGG
TGMGGSIVKM TVESQCRAEL 101 DRRSEWRLTA LAMSAEKQAE WENKICGCAT
EEAPNQLTGN DVMQMLNQST 151 RNQALAALTV KTVSACFKRL YR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 383>:
TABLE-US-00564 m108.seq 1 ATGTTGCCGG GCTTCAACCG GATATTCAAA
CGGTTTGTTC CAACACTCGG 51 AACGGCGCAT AAAACGCCGC CCTTCGCGTT
ATCCCGAACG GGGCGGCTAA 101 TCAGATTCTA TCGCCATAAA AGGCGGGGTT
TCAACCGAAA AGGAATTGAG 151 ATGAATAAAA CCTTGTCTAT TTTGCCGGTG
GCAATCTTAC TCGGCGGCTG 201 CGCCGCCGGA GGCGGTAACA CATTCGGCAG
CTTAGACGGT GGCACAGGCA 251 TGGGCGGCAG CATCGTCAAA ATGGCGGTTG
GGAGCCAATG CCGTGCGGAA 301 TTGGACAAAC GCAGCGAATG GCGTTTGACC
GCGCTGGCGA TGAGTGCCGA 351 AAAACAGGCG GAGTGGGAAA ACAAGATTTG
CGCTTGCGTC GCCCAAGAAG 401 CACCCGAACG GATGACCGGC AACGATGTGA
TGCAGATGCT GGCTCCGTCC 451 ACGCGCAATC AGGCACTTGC CGCCCTGACC
GCCAAAACGG TTTCCGCCTG 501 CTTCAAACAC CTGTACCGCT AA
This corresponds to the amino acid sequence <SEQ ID 384; ORF
108>:
TABLE-US-00565 m108.pep 1 MLPGFNRIFK RFVPTLGTAH KTPPFALSRT
GRLIRFYRHK RRGFNRKGIE 51 MNKTLSILPV AILLGGCAAG GGNTFGSLDG
GTGMGGSIVK MAVGSQCRAE 101 LDKRSEWRLT ALAMSAEKQA EWENKICACV
AQEAPERMTG NDVMQMLAPS 151 TRNQALAALT AKTVSACFKH LYR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 108
shows 89.6% identity over a 173 aa overlap with a predicted ORF
(ORF 108.ng) from N. gonorrhoeae:
TABLE-US-00566 m108/g108 10 20 30 40 50 60 m108.pep
MLPGFNRIFKRFVPTLGTAHKTPPFALSRTGRLIRFYRHKRRGFNRKGIEMNKTLSILPV
||||||||||||:|||||||||||||||||||||| |||||||||||||||||||||||: g108
MLPGFNRIFKRFAPTLGTAHKTPPFALSRTGRLIRSYRHKRRGFNRKGIEMNKTLSILPA 10 20
30 40 50 60 70 80 90 100 110 120 m108.pep
AILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVGSQCRAELDKRSEWRLTALAMSAEKQA
||||||||||| |||||||||||||||||||:| ||||||||:||||||||||||||||| g108
AILLGGCAAGG-NTFGSLDGGTGMGGSIVKMTVESQCRAELDRRSEWRLTALAMSAEKQA 70 80
90 100 110 130 140 150 160 170 m108.pep
EWENKICACVAQEAPERMTGNDVMQMLAPSTRNQALAALTAKTVSACFKHLYRX
|||||||:|:::|||:::||||||||| |||||||||||:||||||||:||| g108
EWENKICGCATEEAPNQLTGNDVMQMLNQSTRNQALAALTVKTVSACFKRLYRX 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 385>:
TABLE-US-00567 a108.seq 1 ATGTTGCCGG GCTTCAACCG GATATTCAAA
CGGTTTGTTC CAACACTCGG 51 AACGGCGCAT AAAACGCCGC CCTTCGCGTT
ATCCCGAACG GGGCGGCTAA 101 TCAGATTCTA TCGCCATAAA AGGCGGGGTT
TCAACCGAAA AGGAATTGAG 151 ATGAATAAAA CCTTGTCTAT TTTGCCGGTG
GCAATCTTAC TCGGCGGCTG 201 CGCCGCCGGG GGCGGTAACA CATTCGGCAG
CTTAGACGGC GGCACAGGTA 251 TGGGCGGCAG CATCGTCAAA ATGGCGGTAG
AAAGCCAATG CCGTGCGGAA 301 TTGAACAAAC GCAGCGAATG GCGTTTGACC
GCGCTGGCGA TGAGTGCCGA 351 AAAACAGGCG GAATGGGAAA ACAAGATTTG
CGCTTGCGTC GCCCAAGAAG 401 CACCCAACCA GCTGACCGGC AACGATGTGA
TGCAGATGCT GGATCCGTCC 451 ACGCGCAATC AGGCACTTGC CGCCCTGACC
GCCAAAACGG TTTCCGCCTG 501 CTTCAAACAC CTGTACCGCT AA
This corresponds to the amino acid sequence <SEQ ID 386; ORF
108.a>:
TABLE-US-00568 a108.pep 1 MLPGFNRIFK RFVPTLGTAH KTPPFALSRT
GRLIRFYRHK RRGFNRKGIE 51 MNKTLSILPV AILLGGCAAG GGNTFGSLDG
GTGMGGSIVK MAVESQCRAE 101 LNKRSEWRLT ALAMSAEKQA EWENKICACV
AQEAPNQLTG NDVMQMLDPS 151 TRNQALAALT AKTVSACFKH LYR* m108/a108
96.5% identity in 173 aa overlap 10 20 30 40 50 60 m108.pep
MLPGFNRIFKRFVPTLGTAHKTPPFALSRTGRLIRFYRHKRRGFNRKGIEMNKTLSILPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a108
MLPGFNRIFKRFVPTLGTAHKTPPFALSRTGRLIRFYRHKRRGFNRKGIEMNKTLSILPV 10 20
30 40 50 60 70 80 90 100 110 120 m108.pep
AILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVGSQCRAELDKRSEWRLTALAMSAEKQA
||||||||||||||||||||||||||||||||| |||||||:|||||||||||||||||| a108
AILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVESQCRAELNKRSEWRLTALAMSAEKQA 70 80
90 100 110 120 130 140 150 160 170 m108.pep
EWENKICACVAQEAPERMTGNDVMQMLAPSTRNQALAALTAKTVSACFKHLYRX
|||||||||||||||:::||||||||| |||||||||||||||||||||||||| a108
EWENKICACVAQEAPNQLTGNDVMQMLDPSTRNQALAALTAKTVSACFKHLYRX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 387>:
TABLE-US-00569 g109.seq 1 ATGTATTATC GCCGGGTTGT GGGGCTATCC
GATGGACTTG GCGATTTGGC 51 AGCCGGTATT GATCGTAGGC GTATGCTTAC
CGCTTTTGGA AGCGGGCATG 101 GAAATGACGC GCAAAGGCAA AACCACCCAA
TCCGCCGCCA TCGTGGTGTT 151 CTCTTCCGTC TGGTCAATCC GGTTTTCGGC
TGGGCGTTGA CGATGCTGTT 201 GGATAATTTG GGCTTAATCG GCTGCAAAGA
ACGCAGCGCG CAATTAGGTT 251 TTGTCGGACG AGTATTGATA CCCGCAGTAG
GTTTCTTAAT CTTGTGTGTG 301 GCGATGGGTG CGGTCGGGAT GCTGCCCGGT
ATCCCTCCGT TTTTGGAGCA 351 GTTCAAATCT TTGGGCTAG
This corresponds to the amino acid sequence <SEQ ID 388; ORF
109.ng>:
TABLE-US-00570 g109.pep 1 MYYRRVVGLS DGLGDLAAGI DRRRMLTAFG
SGHGNDAQRQ NHPIRRHRGV 51 LFRLVNPVFG WALTMLLDNL GLIGCKERSA
QLGFVGRVLI PAVGFLILCV 101 AMGAVGMLPG IPPFLEQFKS LG
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 389>:
TABLE-US-00571 m109.seq 1 ATGTATTATC GCCGGGTTAT GGGGCTATCC
GATGGACTTG GCGATTTGGC 51 AGCCGGTATT GAGCGTAGCC TTGGTCGTAG
GCGTATACTT ACCGCTTTTG 101 GAAGCGGGCA TGGAAATGAC GCGCAAAGGC
AAAACCACCC AATCCGCCGC 151 CATCGTGGTG TTCTCTTCCG CCTTGTCAAT
CCGGTTTTCG GCTGGGCGTT 201 GACGATGCTG TTGGATAATT TGGGCTTAAT
CGGCTGCAAA GAGCGCAGTG 251 CGCAATTAGG TTTCGCCGGA CGCGTGTTGA
TACCCGCAGT AGGTTTCTTG 301 ATCTTGTGTG TGGCGATGGG TGCGGTCGGG
ATGCTGCCCG GTATCCCGCC 351 GTTTTTGGAA CACTTCAAAT CTTTGGGCTA G
This corresponds to the amino acid sequence <SEQ ID 4; ORF
109>:
TABLE-US-00572 m109.pep 1 MYYRRVMGLS DGLGDLAAGI ERSLGRRRIL
TAFGSGHGND AQRQNHPIRR 51 HRGVLFRLVN PVFGWALTML LDNLGLIGCK
ERSAQLGFAG RVLIPAVGFL 101 ILCVAMGAVG MLPGIPPFLE HFKSLG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 109
shows 92.9% identity over a 126 aa overlap with a predicted ORF
(ORF 109.ng) from N. gonorrhoeae:
TABLE-US-00573 m109/g109 10 20 30 40 50 60 m109.pep
MYYRRVMGLSDGLGDLAAGIERSLGRRRILTAFGSGHGNDAQRQNHPIRRHRGVLFRLVN
||||||:|||||||||||||:| ||:||||||||||||||||||||||||||||||| g109
MYYRRVVGLSDGLGDLAAGIDR----RRMLTAFGSGHGNDAQRQNHPIRRHRGVLFRLVN 10 20
30 40 50 70 80 90 100 110 120 m109.pep
PVFGWALTMLLDNLGLIGCKERSAQLGFAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLE
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g109
PVFGWALTMLLDNLGLIGCKERSAQLGFVGRVLIPAVGFLILCVAMGAVGMLPGIPPFLE 60 70
80 90 100 110 m109.pep HFKSLGX :||||| g109 QFKSLGX 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 391>:
TABLE-US-00574 a109.seq 1 ATGTATTATC GCCGGGTTGT GGGGCTATCC
GATGGACTTG GCGATTTGGC 51 AGCCGGTATT GAGCGTAGCC TTGGTCGTAG
GCGTATACTT ACCGCTTTTG 101 GAAGCGGGCA TGGAAATGAC GCGCAAAGGC
AAAACCACCC AATCCGCCGC 151 CACCGTGGTG TTCTCTTCCG CTTGGTCAAT
CCGGTTTTCG GCTGGGCGTT 201 GACGATGCTG TTGGATAATT TGGGCTTAAT
CGGCTGCAAA GAGCGCAGCG 251 CGCAATTAGG TTTCACCGGA CGCGTATTGA
TACCCGTAGT AGGTTTCTTG 301 ATCTTGTGTG TGGCGATGGG TGCGGTCGGG
ATGCTGCCCG GTATCCCGCC 351 GTTTTTGGAG CACTTCAAAT CTTTGGGCTA G
This corresponds to the amino acid sequence <SEQ ID 392; ORF
109>:
TABLE-US-00575 a109.pep 1 MYYRRVVGLS DGLGDLAAGI ERSLGRRRIL
TAFGSGHGND AQRQNHPIRR 51 HRGVLFRLVN PVFGWALTML LDNLGLIGCK
ERSAQLGFTG RVLIPVVGFL 101 ILCVAMGAVG MLPGIPPFLE HFKSLG* m109/a109
97.6% identity in 126 aa overlap 10 20 30 40 50 60 m109.pep
MYYRRVMGLSDGLGDLAAGIERSLGRRRILTAFGSGHGNDAQRQNHPIRRHRGVLFRLVN
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a109
MYYRRVVGLSDGLGDLAAGIERSLGRRRILTAFGSGHGNDAQRQNHPIRRHRGVLFRLVN 10 20
30 40 50 60 70 80 90 100 110 120 m109.pep
PVFGWALTMLLDNLGLIGCKERSAQLGFAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLE
||||||||||||||||||||||||||||:||||||:|||||||||||||||||||||||| a109
PVFGWALTMLLDNLGLIGCKERSAQLGFTGRVLIPVVGFLILCVAMGAVGMLPGIPPFLE 70 80
90 100 110 120 m109.pep HFKSLGX ||||||| a109 HFKSLGX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 393>:
TABLE-US-00576 g111.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACCTT
ATCCGCGCCT TGATATTTGC 51 CCTGGGTTTC ATCTTCCTGA ACGCCTGTTC
GGaacaaacC GCGCAaaccg 101 TTACCCTGCA AGGCGAAACG ATGGGTACGA
CCtATACCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCCCCT
GCCAAAATAC AAAAGCGCAT 201 TGATGATGCG CTTAAAGAAG TCAACCGGCA
GATGtccaCC TACCAGACCG 251 ATTCCGAAAT CAGCCGGTTt atacagacan
atgctggaga gctcttcgcg 301 tntcatgcag nttctataac tgattccgcc
gaagactgtc tgcctaatac 351 gcctatctca tcggcgctct ga
This corresponds to the amino acid sequence <SEQ ID 394; ORF
111.ng>:
TABLE-US-00577 g111.pep 1 MPSETRLPNL IRALIFALGF IFLNACSEQT
AQTVTLQGET MGTTYTVKYL 51 SNNRDKLPSP AKIQKRIDDA LKEVNRQMST
YQTDSEISRF IQTAGELFAH 101 ASITDSAEDC LPNTPISSAL *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 395>:
TABLE-US-00578 m111.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACTTT
ATCCGCGTCT TGATATTTGC 51 CCTGGGTTTC ATCTTCCTGA ACGCCTGTTC
GGAACAAACC GCGCAAACCG 101 TTACCCTGCA AGGCGAAACG ATGGGCACGA
CCTATAyCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCACCT
GCCGAAATAC AwAAACGCAT 201 CGATGACGCG CTTAAAGAAk TCAACCGGyA
GATGTCCACC TATCAGCCCG 251 ACTCCGAAAT CAGCCGGTTC AACCAACACA
CAGCCGGCAA GCCCCTCCGC 301 ATTTCAAGCG ACTTCGCACA CGTTACTGCC
GAAGCCGTCC GCCTGAACCG 351 CCTGACACAC GGCGCGCTGG ACGTAACCGT
CGGCCCCTTG GTCAACCTTT 401 GGGGATTCGG CCCCGACAAA TCCGTTACCC
GTGAACCGTC GCCGGAACAA 451 ATCAAACAGG CGGCATCTTA TACGGGCATA
GACAAAATCA TTTTGAAACA 501 AGGCAAAGAT TACGCTTCCT TGAGCAAAAC
CCACCCCAAG GCCTATTTGG 551 ATTTATCTTC GATTGCCAAA GGCTTCGGCG
TTGATAAAGT TGCGGGCGAA 601 CTGGAAAAAT ACGGCATTCA AAATTATCTG
GTCGAAATCG GCGGCGAGTT 651 GCACGGCAAA GGCAAAAACG CGCGCGGCGA
ACCGTGGCGC ATCGGTATCG 701 AGCAGCCCAA TATCGTCCAA GGCGGCAATA
CGCAGATTAT CGTCCCGCTG 751 AACAACCGTT CGCTTGCCAC TTCCGGCGAT
TACCGTATTT TCCACGTCGA 801 TAAAAACGGC AAACGCCTCT CCCATATCAT
CAACCCGAAC AACAAACGAC 851 CCATCAGCCA CAACCTCGCC TCCATCAGCG
TGGTCGCAGA CAGTGCGATG 901 ACGGCGGACG GCTTGTCCAC AGGATTATTC
GTATTGGGCG AAACCGAAGC 951 CTTAAAGCTG GCAGAGCGCG AAAAACTCGC
TGTTTTCCTG ATTGTCAGGG 1001 ATAAAGGCGG cTACCGCACC GCCATGTCTT
CCGAATTTGA AAAACTGcTC 1051 CGCTAA
This corresponds to the amino acid sequence <SEQ ID 396; ORF
111>:
TABLE-US-00579 m111.pep 1 MPSETRLPNF IRVLIFALGF IFLNACSEQT
AQTVTLQGET MGTTYXVKYL 51 SNNRDKLPSP AEIXKRIDDA LKEXNRXMST
YQPDSEISRF NQHTAGKPLR 101 ISSDFAHVTA EAVRLNRLTH GALDVTVGPL
VNLWGFGPDK SVTREPSPEQ 151 IKQAASYTGI DKIILKQGKD YASLSKTHPK
AYLDLSSIAK GFGVDKVAGE 201 LEKYGIQNYL VEIGGELHGK GKNARGEPWR
IGIEQPNIVQ GGNTQIIVPL 251 NNRSLATSGD YRIFHVDKNG KRLSHIINPN
NKRPISHNLA SISVVADSAM 301 TADGLSTGLF VLGETEALKL AEREKLAVFL
IVRDKGGYRT AMSSEFEKLL 351 R*
ORF 111 shows 88.7% identity over a 97 aa overlap with a predicted
ORF (ORF 111.ng) from N. gonorrhoeae:
TABLE-US-00580 m111.pep/g111.pep 10 20 30 40 50 60 m111.pep
MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTTYXVKYLSNNRDKLPSP
|||||||||:||:||||||||||||||||||||||||||||||||:|||||||||||||| g111
MPSETRLPNLIRALIFALGFIFLNACSEQTAQTVTLQGETMGTTYTVKYLSNNRDKLPSP 10 20
30 40 50 60 70 80 90 100 110 120 m111.pep
AEIXKRIDDALKEXNRXMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVRLNRLTH |:|
||||||||| || ||||| ||||||| | :||: g111
AKIQKRIDDALKEVNRQMSTYQTDSEISRFIQTXAGELFAXHAXSITDSAEDCLPNTPIS 70 80
90 100 110 120 130 140 150 160 170 180 m111.pep
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK g111
SALX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 397>:
TABLE-US-00581 a111.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACTTT
ATCCGCACCT TGATATTTGC 51 CCTGAGTTTT ATCTTCCTGA ACGCCTGTTC
GGAACAAACC GCGCAAACCG 101 TTACCCTGCA AGGTGAAACG ATGGGCACGA
CCTATACCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCACCT
GCCGAAATAC AAAAGCGCAT 201 CGATGACGCG CTTAAAGAAG TCAACCGGCA
GATGTCCACC TATCAGCCCG 251 ACTCCGAAAT CAGCCGGTTC AACCAACACA
CAGCCGGCAA GCCCCTCCGC 301 ATTTCAAGCG ACTTCGCACA CGTTACTGCC
GAAGCCGTCC ACCTGAACCG 351 CCTGACACAC GGCGCGCTGG ACGTAACCGT
CGGCCCCTTG GTCAACCTTT 401 GGGGATTCGG CCCCGACAAA TCCGTTACCC
GTGAACCGTC GCCGGAACAA 451 ATCAAACAAG CAGCATCTTA TACGGGCATA
GACAAAATCA TTTTGAAACA 501 AGGCAAAGAT TACGCTTCCT TGAGCAAAAC
CCACCCCAAG GCCTATTTGG 551 ATTTATCTTC GATTGCCAAA GGCTTCGGCG
TTGATAAAGT TGCGGGCGAA 601 CTGGAAAAAT ACGGCATTCA AAATTATCTG
GTCGAAATCG GCGGCGAGTT 651 GCACGGCAAA GGCAAAAACG CGCGCGGCGA
ACCTTGGCGC ATCGGCATCG 701 AACAGCCCAA CATCGTCCAA GGCGGCAATA
CGCAGATTAT CGTCCCGCTG 751 AACAACCGTT CGCTTGCCAC TTCCGGCGAT
TACCGTATTT TCCACGTCGA 801 TAAAAGCGGC AAACGCCTCT CCCATATCAT
TAATCCGAAC AACAAACGAC 851 CCATCAGCCA CAACCTCGCC TCCATCAGCG
TGGTCGCAGA CAGTGCGATG 901 ACGGCGGACG GCTTGTCCAC AGGATTATTC
GTATTGGGCG AAACCGAAGC 951 CTTAAAGCTG GCAGAGCGCG AAAAACTCGC
TGTTTTCCTG ATTGTCAGGG 1001 ATAAAGGCGG CTACCGCACC GCCATGTCTT
CCGAATTTGA AAAACTGCTC 1051 CGCTAA
This corresponds to the amino acid sequence <SEQ ID 398; ORF
111.a>:
TABLE-US-00582 a111.pep 1 MPSETRLPNF IRTLIFALSF IFLNACSEQT
AQTVTLQGET MGTTYTVKYL 51 SNNRDKLPSP AEIQKRIDDA LKEVNRQMST
YQPDSEISRF NQHTAGKPLR 101 ISSDFAHVTA EAVHLNRLTH GALDVTVGPL
VNLWGFGPDK SVTREPSPEQ 151 IKQAASYTGI DKIILKQGKD YASLSKTHPK
AYLDLSSIAK GFGVDKVAGE 201 LEKYGIQNYL VEIGGELHGK GKNARGEPWR
IGIEQPNIVQ GGNTQIIVPL 251 NNRSLATSGD YRIFHVDKSG KRLSHIINPN
NKRPISHNLA SISVVADSAM 301 TADGLSTGLF VLGETEALKL AEREKLAVFL
IVRDKGGYRT AMSSEFEKLL 351 R* m111/a111 97.7% identity in 351 aa
overlap 10 20 30 40 50 60 m111.pep
MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTTYXVKYLSNNRDKLPSP
||||||||||||:|||||:||||||||||||||||||||||||||:|||||||||||||| a111
MPSETRLPNFIRTLIFALSFIFLNACSEQTAQTVTLQGETMGTTYTVKYLSNNRDKLPSP 10 20
30 40 50 60 70 80 90 100 110 120 m111.pep
AEIXKRIDDALKEXNRXMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVRLNRLTH |||
||||||||| || ||||||||||||||||||||||||||||||||||||:|||||| a111
AEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVHLNRLTH 70 80
90 100 110 120 130 140 150 160 170 180 m111.pep
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a111
GALDVTVGPLVNLWGFGPDKSVIREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK 130
140 150 160 170 180 190 200 210 220 230 240 m111.pep
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a111
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQ 190
200 210 220 230 240 250 260 270 280 290 300 m111.pep
GGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHIINPNNKRPISHNLASISVVADSAM
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| a111
GGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHIINPNNKRPISHNLASISVVADSAM 250
260 270 280 290 300 310 320 330 340 350 m111.pep
TADGLSTGLFVLGETEALKLAEREKLAVFLIVRDKGGYRTAMSSEFEKLLRX
|||||||||||||||||||||||||||||||||||||||||||||||||||| a111
TADGLSTGLFVLGETEALKLAEREKLAVFLIVRDKGGYRTAMSSEFEKLLRX 310 320 330
340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 399>:
TABLE-US-00583 g111-1.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACCTT
ATCCGCGCCT TGATATTTGC 51 CCTGGGTTTC ATCTTCCTGA ACGCCTGTTC
GGAACAAACC GCGCAAacCG 101 TTACCCTGCA AGGCGAAACG ATGGGTACGA
CCTATACCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCCCCT
GCCAAAATAC AAAAGCGCAT 201 TGATGATGCG CTTAAAGAAG TCAACCGGCA
GATGTCCACC TACCAGACCG 251 ATTCCGAAAT CAGCCGGTTC AACCAACACA
CAGCCGGCAA GCCCCTCCGC 301 ATTTCAAGCG ATTTCGCACA CGTTACCGCC
GAAGCCGTCC GCCTGAACCG 351 CCTGACTCAC GGCGCACTGG ACGTAACCGT
CGGCCCTTTG GTCAACCTTT 401 GGGGGTTCGG CCCCGACAAA TCCGTTACCC
GTGAACCGTC GCCGGAACAA 451 ATCAAACAGG CGGCATCTTA TACGGGCATA
GACAAAATCA TTTTGCAACA 501 AGGCAAAGAT TACGCTTCCT TGAGCAAAAC
CCACCCCAAA GCCTATTTGG 551 ATTTATCTTC GATTGCCAAA GGCTTCGGCG
TTGATAAAGT TGCGGGCGAA 601 CTGGAAAAAT ACGGCATTCA AAATTATCTG
GTCGAAATCG GCggcGAGTT 651 GCACGGCAAA GGCAAAAATG CGCACGGCGA
ACCGTGGCGC ATCGGTATAG 701 AGCAACCCAA TATcatccaa ggcggcaata
cgcAGattat cgtcccgctg 751 aaCaaccgtt cgcttgccac ttccggcgAT
taccgtaTTT tccacgtcgA 801 TAAAAACGGC Aaacgccttt cccacATCAT
CAATCCCAAC AACAAACGAC 851 CCATCAGcCA CAAcctcgcc tcCATCAgCg
TGGTCTCAGA CAGTGCAATG 901 ACGGCGGACG GTTTATCCAC AGGATTATTT
GTTTTAGGCG AAACCGAAGC 951 CTTAAGGCTG GCAGAACAAG AAAAACTCGC
TGTTTTCCTA ATTGTCCGGG 1001 ATAAGGACGG CTACCGCACC GCCATGTCTT
CCGAATTTGC CAAGCTGCTC 1051 CGCTAA
This corresponds to the amino acid sequence <SEQ ID 400; ORF
111-1.ng>:
TABLE-US-00584 g111-1.pep 1 MPSETRLPNL IRALIFALGF IFLNACSEQT
AQTVTLQGET MGTTYTVKYL 51 SNNRDKLPSP AKIQKRIDDA LKEVNRQMST
YQTDSEISRF NQHTAGKPLR 101 ISSDFAHVTA EAVRLNRLTH GALDVTVGPL
VNLWGFGPDK SVTREPSPEQ 151 IKQAASYTGI DKIILQQGKD YASLSKTHPK
AYLDLSSIAK GFGVDKVAGE 201 LEKYGIQNYL VEIGGELHGK GKNAHGEPWR
IGIEQPNIIQ GGNTQIIVPL 251 NNRSLATSGD YRIFHVDKNG KRLSHIINPN
NKRPISHNLA SISVVSDSAM 301 TADGLSTGLF VLGETEALRL AEQEKLAVFL
IVRDKDGYRT AMSSEFAKLL 351 R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 401>:
TABLE-US-00585 m111-1.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACTTT
ATCCGCGTCT TGATATTTGC 51 CCTGGGTTTC ATCTTCCTGA ACGCCTGTTC
GGAACAAACC GCGCAAACCG 101 TTACCCTGCA AGGCGAAACG ATGGGCACGA
CCTATACCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCACCT
GCCGAAATAC AAAAACGCAT 201 CGATGACGCG CTTAAAGAAG TCAACCGGCA
GATGTCCACC TATCAGCCCG 251 ACTCCGAAAT CAGCCGGTTC AACCAACACA
CAGCCGGCAA GCCCCTCCGC 301 ATTTCAAGCG ACTTCGCACA CGTTACTGCC
GAAGCCGTCC GCCTGAACCG 351 CCTGACACAC GGCGCGCTGG ACGTAACCGT
CGGCCCCTTG GTCAACCTTT 401 GGGGATTCGG CCCCGACAAA TCCGTTACCC
GTGAACCGTC GCCGGAACAA 451 ATCAAACAGG CGGCATCTTA TACGGGCATA
GACAAAATCA TTTTGAAACA 501 AGGCAAAGAT TACGCTTCCT TGAGCAAAAC
CCACCCCAAG GCCTATTTGG 551 ATTTATCTTC GATTGCCAAA GGCTTCGGCG
TTGATAAAGT TGCGGGCGAA 601 CTGGAAAAAT ACGGCATTCA AAATTATCTG
GTCGAAATCG GCGGCGAGTT 651 GCACGGCAAA GGCAAAAACG CGCGCGGCGA
ACCGTGGCGC ATCGGTATCG 701 AGCAGCCCAA TATCGTCCAA GGCGGCAATA
CGCAGATTAT CGTCCCGCTG 751 AACAACCGTT CGCTTGCCAC TTCCGGCGAT
TACCGTATTT TCCACGTCGA 801 TAAAAACGGC AAACGCCTCT CCCATATCAT
CAACCCGAAC AACAAACGAC 851 CCATCAGCCA CAACCTCGCC TCCATCAGCG
TGGTCGCAGA CAGTGCGATG 901 ACGGCGGACG GCTTGTCCAC AGGATTATTC
GTATTGGGCG AAACCGAAGC 951 CTTAAAGCTG GCAGAGCGCG AAAAACTCGC
TGTTTTCCTG ATTGTCAGGG 1001 ATAAAGGCGG CTACCGCACC GCCATGTCTT
CCGAATTTGA AAAACTGCTC 1051 CGCTAA
This corresponds to the amino acid sequence <SEQ ID 402; ORF
111-1>:
TABLE-US-00586 m111-1.pep 1 MPSETRLPNF IRVLIFALGF IFLNACSEQT
AQTVTLQGET MGTTYTVKYL 51 SNNRDKLPSP AEIQKRIDDA LKEVNRQMST
YQPDSEISRF NQHTAGKPLR 101 ISSDFAHVTA EAVRLNRLTH GALDVTVGPL
VNLWGFGPDK SVTREPSPEQ 151 IKQAASYTGI DKIILKQGKD YASLSKTHPK
AYLDLSSIAK GFGVDKVAGE 201 LEKYGIQNYL VEIGGELHGK GKNARGEPWR
IGIEQPNIVQ GGNTQIIVPL 251 NNRSLATSGD YRIFHVDKNG KRLSHIINPN
NKRPISHNLA SISVVADSAM 301 TADGLSTGLF VLGETEALKL AEREKLAVFL
IVRDKGGYRT AMSSEFEKLL 351 R* m111-1/g111-1 96.6% identity in 351 aa
overlap 10 20 30 40 50 60 m111-1.pep
MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTTYTVKYLSNNRDKLPSP
|||||||||:||:||||||||||||||||||||||||||||||||||||||||||||||| g111-1
MPSETRLPNLIRALIFALGFIFLNACSEQTAQTVTLQGETMGTTYLVKYLSNNRDKLPSP 10 20
30 40 50 60 70 80 90 100 110 120 m111-1.pep
AEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVRLNRLTH
|:|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| g111-1
AKIQKRIDDALKEVNRQMSTYQTDSEISRFNQHTAGKPLRISSDFAHVTAEAVRLNRLTH 70 80
90 100 110 120 130 140 150 160 170 180 m111-1.pep
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| g111-1
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILQQGKDYASLSKTHPK 130
140 150 160 170 180 190 200 210 220 230 240 m111-1.pep
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQ
||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||:| g111-1
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNAHGEPWRIGIEQPNIIQ 190
200 210 220 230 240 250 260 270 280 290 300 m111-1.pep
GGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHIINPNNKRPISHNLASISVVADSAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| g111-1
GGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHIINPNNKRPISHNLASISVVSDSAM 250
260 270 280 290 300 310 320 330 340 350 m111-1.pep
TADGLSTGLFVLGETEALKLAEREKLAVFLIVRDKGGYRTAMSSEFEKLLRX
||||||||||||||||||:|||:|||||||||||| |||||||||| ||||| g111-1
TADGLSTGLFVLGETEALRLAEQEKLAVFLIVRDKDGYRTAMSSEFAKLLRX 310 320 330
340 350 g111-1/p44550 sp|P44550|YOJL_HAEIN HYPOTHETICAL LIPOPROTEIN
HI0172 PRECURSOR >gi|1074292|pir||C64144 hypothetical protein
HI0172 - Haemophilus influenzae (strain Rd KW20) >gi|1573128
(U32702) lipoprotein, putative [Haemophilus influenzae Rd] Length =
346 Score = 349 bits (885), Expect = 2e-95 Identities = 177/328
(53%), Positives = 240/328 (72%), Gaps = 4/328 (1%) Query: 23
LNACSEQTAQTVTLQGETMGTTYXVKYLSNNRDKLPSPAEIXKRIDDALKEXNRXMSTYQ 82 L
AC ++T + ++L G+TMGTTY VKYL + S + + I+ LK+ N MSTY+ Sbjct: 17
LAACQKET-KVISLSGKTMGTTYHVKYLDDGSITATS-EKTHEEIEAILKDVNAKMSTYK 74
Query: 83
PDSEISRFNQHT-AGKPLRISSDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKS 141
DSE+SRFNQ+T P+ IS+DFA V AEA+RLN++T GALDVTVGP+VNLWGFGP+K Sbjct: 75
KDSELSRFNQNTQVNTPIEISADFAKVLAEAIRLNKVTEGALDVTVGPVVNLWGFGPEKR 134
Query: 142
VTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGEL 201
++P+PEQ+ + ++ GIDKI L K+ A+LSK P+ Y+DLSSIAKGFGVD+VA +L Sbjct: 135
PEKQPTPEQLAERQAWVGIDKITLDTNKEKATLSKALPQVYVDLSSIAKGFGVDQVAEKL 194
Query: 202
EKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDY 261 E+
QNY+VEIGGE+ KGKN G+PW+I IE+P + ++ LNN +A+SGDY Sbjct: 195
EQLNAQNYMVEIGGEIRAKGKNIEGKPWQIAIEKPTTTGERAVEAVIGLNNMGMASSGDY 254
Query: 262
RIFHVDKNGKRLSHIINPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLA 321
RI+ ++NGKR +H I+P PI H+LASI+V+A ++MTADGLSTGLFVLGE +AL++A Sbjct: 255
RIY-FEENGKRFAHEIDPKTGYPIQHHLASITVLAPTSMTADGLSTGLFVLGEDKALEVA 313
Query: 322 EREKLAVFLIVRDKGGYRTAMSSEFEKL 349 E+ LAV+LI+R G+ T SS
F+KL Sbjct: 314 EKNNLAVYLIIRTDNGFVTKSSSAFKKL 341
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 403>:
TABLE-US-00587 a111-1.seq 1 ATGCCGTCTG AAACACGCCT GCCGAACTTT
ATCCGCACCT TGATATTTGC 51 CCTGAGTTTT ATCTTCCTGA ACGCCTGTTC
GGAACAAACC GCGCAAACCG 101 TTACCCTGCA AGGTGAAACG ATGGGCACGA
CCTATACCGT CAAATACCTT 151 TCAAATAATC GGGACAAACT CCCCTCACCT
GCCGAAATAC AAAAGCGCAT 201 CGATGACGCG CTTAAAGAAG TCAACCGGCA
GATGTCCACC TATCAGCCCG 251 ACTCCGAAAT CAGCCGGTTC AACCAACACA
CAGCCGGCAA GCCCCTCCGC 301 ATTTCAAGCG ACTTCGCACA CGTTACTGCC
GAAGCCGTCC ACCTGAACCG 351 CCTGACACAC GGCGCGCTGG ACGTAACCGT
CGGCCCCTTG GTCAACCTTT 401 GGGGATTCGG CCCCGACAAA TCCGTTACCC
GTGAACCGTC GCCGGAACAA 451 ATCAAACAAG CAGCATCTTA TACGGGCATA
GACAAAATCA TTTTGAAACA 501 AGGCAAAGAT TACGCTTCCT TGAGCAAAAC
CCACCCCAAG GCCTATTTGG 551 ATTTATCTTC GATTGCCAAA GGCTTCGGCG
TTGATAAAGT TGCGGGCGAA 601 CTGGAAAAAT ACGGCATTCA AAATTATCTG
GTCGAAATCG GCGGCGAGTT 651 GCACGGCAAA GGCAAAAACG CGCGCGGCGA
ACCTTGGCGC ATCGGCATCG 701 AACAGCCCAA CATCGTCCAA GGCGGCAATA
CGCAGATTAT CGTCCCGCTG 751 AACAACCGTT CGCTTGCCAC TTCCGGCGAT
TACCGTATTT TCCACGTCGA 801 TAAAAGCGGC AAACGCCTCT CCCATATCAT
TAATCCGAAC AACAAACGAC 851 CCATCAGCCA CAACCTCGCC TCCATCAGCG
TGGTCGCAGA CAGTGCGATG 901 ACGGCGGACG GCTTGTCCAC AGGATTATTC
GTATTGGGCG AAACCGAAGC 951 CTTAAAGCTG GCAGAGCGCG AAAAACTCGC
TGTTTTCCTG ATTGTCAGGG 1001 ATAAAGGCGG CTACCGCACC GCCATGTCTT
CCGAATTTGA AAAACTGCTC 1051 CGCTAA
This corresponds to the amino acid sequence <SEQ ID 404; ORF
111-1.a>:
TABLE-US-00588 a111-1.pep 1 MPSETRLPNF IRTLIFALSF IFLNACSEQT
AQTVTLQGET MGTTYTVKYL 51 SNNRDKLPSP AEIQKRIDDA LKEVNRQMST
YQPDSEISRF NQHTAGKPLR 101 ISSDFAHVTA EAVHLNRLTH GALDVTVGPL
VNLWGFGPDK SVTREPSPEQ 151 IKQAASYTGI DKIILKQGKD YASLSKTHPK
AYLDLSSIAK GFGVDKVAGE 201 LEKYGIQNYL VEIGGELHGK GKNARGEPWR
IGIEQPNIVQ GGNTQIIVPL 251 NNRSLATSGD YRIFHVDKSG KRLSHIINPN
NKRPISHNLA SISVVADSAM 301 TADGLSTGLF VLGETEALKL AEREKLAVFL
IVRDKGGYRT AMSSEFEKLL 351 R* a111-1/m111-1 98.9% identity in 351 aa
overlap 10 20 30 40 50 60 a111-1.pep
MPSETRLPNFIRTLIFALSFIFLNACSEQTAQTVTLQGETMGTTYTVKYLSNNRDKLPSP
||||||||||||:|||||:||||||||||||||||||||||||||||||||||||||||| m111-1
MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTTYTVKYLSNNRDKLPSP 10 20
30 40 50 60 70 80 90 100 110 120 a111-1.pep
AEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVHLNRLTH
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| m111-1
AEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRISSDFAHVTAEAVRLNRLTH 70 80
90 100 110 120 130 140 150 160 170 180 a111-1.pep
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m111-1
GALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGIDKIILKQGKDYASLSKTHPK 130
140 150 160 170 180 190 200 210 220 230 240 a111-1.pep
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m111-1
AYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELHGKGKNARGEPWRIGIEQPNIVQ 190
200 210 220 230 240 250 260 270 280 290 300 a111-1.pep
GGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHIINPNNKRPISHNLASISVVADSAM
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| m111-1
GGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHIINPNNKRPISHNLASISVVADSAM 250
260 270 280 290 300 310 320 330 340 350 a111-1.pep
TADGLSTGLFVLGETEALKLAEREKLAVFLIVRDKGGYRTAMSSEFEKLLRX
|||||||||||||||||||||||||||||||||||||||||||||||||||| m111-1
TADGLSTGLFVLGETEALKLAEREKLAVFLIVRDKGGYRTAMSSEFEKLLRX 310 320 330
340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 405>:
TABLE-US-00589 g114.seq 1 ATGGCTTCCA TCACTTCGCC GCTGCACGGG
GCGCAGCAGG AATGCAGCAA 51 GACTTTTTTA TGTCCGCCGG GCGGGACGAG
TATGGGGCGG TCAATGTCGG 101 TAACGGTAGG TTTGTTTTGT GTTTCCATTA
ACTTAACAAT ATCTGTCGAA 151 TACGGTCAAA GCGGCTATTT TACCAGAGCC
GCCGAATGTA AAACAGGGTG 201 TCAGGGCATC AGCCCGAGCT GCCTGAACGA
ACGGACGGTT TGCGAGGTAA 251 CGATAAAATG GTCGAGCAGC GAAACATCAA
CCAGCGACAT GGCCTGTGCC 301 AGCCGCCTTG TGAACATGAT GTCTTCCTGC
GAAGGTTCAG GCGAGCCGCC 351 CGGATGGTTG TGCGCGATAA TCAGGCTGTC
GGCATATTCG TCCAATGCCA 401 GTTTGACGAT TTCGCGGATG TAA
This corresponds to the amino acid sequence <SEQ ID 406; ORF
114.ng>:
TABLE-US-00590 g114.pep 1 MASITSPLHG AQQECSKTFL CPPGGTSMGR
SMSVTVGLFC VSINLTISVE 51 YGQSGYFTRA AECKTGCQGI SPSCLNERTV
CEVTIKWSSS ETSTSDMACA 101 SRLVNMMSSC EGSGEPPGWL CAIIRLSAYS
SNASLTISRM *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 407>:
TABLE-US-00591 m114.seq 1 ATGGCTTCCA TCACTTCGCC GCTGCACGGG
GCGCACAGAG AATGCAGCAA 51 GACTTTTTTA TGTCCACCGG GCGGGACGAG
TATAGGGCGG TCAATGTCGG 101 TAACGGTAGG TTTGTTTTGT GTTTCCATTA
ACTTAACAAT ATCTGTTGAA 151 TACGGTTGAA GCGGCTATTT TATCAGAGCC
GCCGCATGTA AAACAGAGTG 201 TCAGGGCATC AACCCGAGCT GTCTGAACGA
ACAGACGCTT TGCGAkGTAA 251 CGATAAAATG GTCGAGCAGC GACACATCGA
CCAGCGACAT TGCCTGTGCC 301 AGCCGCCTTG TGAACATGAT GTCTTCCTGC
GAArGTTCsG GCGAGCCGcC 351 CGgATGGTTG TGCGCAATAA TCAGGCTGTC
GGCATATTCG TCCAATGCCA 401 GTTTGACGAT TTCGCGGATG TAA
This corresponds to the amino acid sequence <SEQ ID 408; ORF
114>:
TABLE-US-00592 m114.pep 1 MASITSPLHG AHRECSKTFL CPPGGTSIGR
SMSVTVGLFC VSINLTISVE 51 YGXSGYFIRA AACKTECQGI NPSCLNEQTL
CXVTIKWSSS DTSTSDIACA 101 SRLVNMMSSC EXSGEPPGWL CAIIRLSAYS
SNASLTISRM * m114/g114 90.0% identity over a 140 aa overlap 10 20
30 40 50 60 m114.pep
MASITSPLHGAHRECSKTFLCPPGGTSIGRSMSVTVGLFCVSINLTISVEYGXSGYFIRA
|||||||||||::||||||||||||||:||||||||||||||||||||||| |||| || g114
MASITSPLHGAQQECSKTFLCPPGGTSMGRSMSVTVGLFCVSINLTISVEYGQSGYFTRA 10 20
30 40 50 60 70 80 90 100 110 120 m114.pep
AACKTECQGINPSCLNEQTLCXVTIKWSSSDTSTSDIACASRLVNMMSSCEXSGEPPGWL | |||
||||:||||||:|:| ||||||||:|||||:|||||||||||||| |||||||| g114
AECKTGCQGISPSCLNERTVCEVTIKWSSSETSTSDMACASRLVNMMSSCEGSGEPPGWL 70 80
90 100 110 120 130 140 m114.pep CAIIRLSAYSSNASLTISRMX
||||||||||||||||||||| g114 CAIIRLSAYSSNASLTISRMX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 409>:
TABLE-US-00593 a114.seq 1 ATGCCGGAGG CAAGCATCGC CTCCATCACT
TCGCCGCTGC ACGGGGCGCA 51 ACAGGAATGC AGCAAGACTT TTTTATGTCC
GCCGGGCGGG ACGAGTATGG 101 GGCGGTCAAT GTCGGTAACG GTAGGTTTGT
TTTGTGTTTC CATTAACTTA 151 ACGATATCTG TCGAATACGG TTGAAGCGGC
TATTTTATCA GAGCCGCCGC 201 ATGTAAAACA GGGTGTCAGG GCATCAGCCC
GAGCTGCCTG AACGAACGGA 251 CGGTTTGCGC CGTTACGATA AAATGGTCGA
GCAGCGACAC ATCGACCAGC 301 GACATTGCCT GTGCCAGCCG CCTTGTGAAC
ATGATGTCTT CCTGCGAAGG 351 TTCGGGCGAG CCGCCCGGAT GGTTGTGCGC
GATAATCAGG CTGTCGGCAT 401 ATTCGTCCAA TGCCAGTTTG ACAATTTCAC
GGATGTAA
This corresponds to the amino acid sequence <SEQ ID 410; ORF
114.a>:
TABLE-US-00594 a114.pep 1 MPEASIASIT SPLHGAQQEC SKTFLCPPGG
TSMGRSMSVT VGLFCVSINL 51 TISVEYG*SG YFIRAAACKT GCQGISPSCL
NERTVCAVTI KWSSSDTSTS 101 DIACASRLVN MMSSCEGSGE PPGWLCAIIR
LSAYSSNASL TISRM* m114/a114 92.9% identity in 140 aa overlap 10 20
30 40 50 m114.pep
MASITSPLHGAHRECSKTFLCPPGGTSIGRSMSVTVGLFCVSINLTISVEYGXSG
:||||||||||::||||||||||||||:||||||||||||||||||||||||||| a114
MPEASIASITSPLHGAQQECSKTFLCPPGGTSMGRSMSVTVGLFCVSINLTISVEYGXSG 10 20
30 40 50 60 60 70 80 90 100 110 m114.pep
YFIRAAACKTECQGINPSCLNEQTLCXVTIKWSSSDTSTSDIACASRLVNMMSSCEXSGE
|||||||||| ||||:||||||:|:| ||||||||||||||||||||||||||||| ||| a114
YFIRAAACKTGCQGISPSCLNERTVCAVTIKWSSSDTSTSDIACASRLVNMMSSCEGSGE 70 80
90 100 110 120 120 130 140 m114.pep PPGWLCAIIRLSAYSSNASLTISRMX
|||||||||||||||||||||||||| a114 PPGWLCAIIRLSAYSSNASLTISRMX 130
140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 411>:
TABLE-US-00595 g117.seq 1 atggtcgacg aactcgacCT GCTGCCCGAT
GCCGTCGCCG CCACCCTGCT 51 TGCCGACATC GGACGCTACG TCCCCGATTG
GAACCTATTG GTTTCCGAGC 101 GCTGCAACAG CACCGTCGCC GAGCTGGTCA
AAGGTGtgga CGAAGTGCAG 151 AAACTTACCC ACTTCGCCCG GGTGGACAGC
CTCGCCACGC CGGAAGAACG 201 CGCACAGCAA GCGGAAACCA TGCGGAAAAT
GCTGCTGGCg atggttaccg 251 Acatccgcgt cgtaTTAATC AAACTGGCGA
TGCGTacgcg caccCTGcta 301 ttTTtaaGCA ACGCCCCCGA CAGCCCTGAA
AAACgcgccG TCgccaaAga 351 aacccTCGAC ATCTTCGCCC CGCTCGCCAA
CCGCTTGGGC GTGTGGCAGC 401 TCAAATGGCA GCTCGAAGAT TTGGGCTTCC
GCCATCAAGA ACCCGAAAAA 451 TACCGCGAAA TCGCCCTGCT TTTGGACGAA
AAACGCACCG AACGCCTCGA 501 ATACATCGAA AACTTCCTCG ATATCCTGCG
TACGGAACTC AAAAAATACA 551 ATATCCACTT TGAAGTCGCC GGCCGTCCGA
AACACATCTA CTCCATTTAC 601 AAAAAAATGG TGAAGAAAAA ACTCAGCTTC
GACGgccTGT TCGACATCCG 651 CGCCGTGCGG ATTCTGGTCG ATACCGTCCC
CGaGTGTTAC ACCACGCTGG 701 gcaTCGTCCA CAGCCTCTGG CAGCCCATTC
CCGGCGagtt CGAcgactAC 751 ATCGCCAACC CCAAAGgcaA CGgttATAAA
AGtTTGCACA CCGTCATCGT 801 cggcccGGAa gacaaaggtg tggaaGtgCA
AATCCGCACC TTCGAtatGC 851 accAATTCaa CgaatTcggT gtcgccgCCC
ACTGGCGtta caaagaaggc 901 ggcaaaggcg attccGCCtA cgaacaaAAA
ATcgccTggt TGCgccaACT 951 CTTGGACTGG CGCGAAAATA TGGCGGAAAG
CGGCAAGGAA GACCTCGCCG 1001 CCGCCTTCAA AACCGAGCTT TTCAACGACA
CGATTTATGT TTTGACCCCG 1051 CACGGCAAAG TCCTCTCTCT GCCAACGGGC
GCAACCCCCA TCGACTTCGC 1101 CTACGCCCTG CACAGCAGCA TcggCGACCG
CTGCCGGGGC GCGAAAGTCG 1151 AaggGCAGAT TGTGCCGCTG TCCACCCCGC
TCGAAAACGG ACAGCGCGTC 1201 GAAATcatta cCGCcaaAGA AGGGCATCCT
TCCGTCAACT GGCTTTACGA 1251 AGGctgGGtc aAATCCGGCA AGGCCATCGG
caaAATCCGC GCCTAcatCC 1301 GCCAGcaaAa cgCcgaCACC GTGCGCGAAG
AAGGCCGTGT CCAACTCGAC 1351 AAGCAGCTTG CCAAACTCAC GCCCAAACCC
AACCTGCAAG AGCTTgccga 1401 aaATCTCGGC tacaaAAAGC cagaagacct
ctacacCGCc gtcggacaag 1451 gcgaaatttc caaccgcgcc atCcaaaaag
cctgcggcac GCTgaacgaa 1501 ccgccccCCG TGCCCGTCAG CGCAACCACC
ATCGTCAAAC AGTCCAAAAT 1551 CAAAAAAGGT GGCAAAACCG GCGTGCTCAT
CGACGGCGAA GACGGCTTGA 1601 TGACCACGCT TGCCAAATGC TGCAAACCCG
CGCCGCCCGA CGATATTGCC 1651 GGCTTCGTTA CCCGCGAGCG CGGCATTTCC
GTCCACCGCA AAACCTGCCC 1701 CTCTTTCCGA CACCTTGCCG AACACGCGCC
CGAAAAAGTA CTGGACGCAA 1751 GTTGGGCGGC GTTGCAGGAA GGGCAAGTGT
TCGCCGTCGA TATCGAAATC 1801 CGCGCCCAAG ACCGCTCCGG GCTTTTGCGC
GACGTATCCG ACGCGCTCGC 1851 CCGCCACAAA CTCAACGTTA CCGCCGTGCA
AACCCAGTCC CGCGACTTGG 1901 AAGCCAGCAT GAGGTTCACG CTCGAAGTCA
AACAAGtCAA CGacCTCCCG 1951 CGCGTCCTCG CCGGCCTCGG CGATGTCAAA
GGCGTATTGA GCGTTACCCG 2001 GCTTTAA
This corresponds to the amino acid sequence <SEQ ID 412; ORF
117.ng>:
TABLE-US-00596 g117.pep 1 MVDELDLLPD AVAATLLADI GRYVPDWNLL
VSERCNSTVA ELVKGVDEVQ 51 KLTHFARVDS LATPEERAQQ AETMRKMLLA
MVTDIRVVLI KLAMRTRTLL 101 FLSNAPDSPE KRAVAKETLD IFAPLANRLG
VWQLKWQLED LGFRHQEPEK 151 YREIALLLDE KRTERLEYIE NFLDILRTEL
KKYNIHFEVA GRPKHIYSIY 201 KKMVKKKLSF DGLFDIRAVR ILVDTVPECY
TTLGIVHSLW QPIPGEFDDY 251 IANPKGNGYK SLHTVIVGPE DKGVEVQIRT
FDMHQFNEFG VAAHWRYKEG 301 GKGDSAYEQK IAWLRQLLDW RENMAESGKE
DLAAAFKTEL FNDTIYVLTP 351 HGKVLSLPTG ATPIDFAYAL HSSIGDRCRG
AKVEGQIVPL STPLENGQRV 401 EIITAKEGHP SVNWLYEGWV KSGKAIGKIR
AYIRQQNADT VREEGRVQLD 451 KQLAKLTPKP NLQELAENLG YKKPEDLYTA
VGQGEISNRA IQKACGTLNE 501 PPPVPVSATT IVKQSKIKKG GKTGVLIDGE
DGLMTTLAKC CKPAPPDDIA 551 GFVTRERGIS VHRKTCPSFR HLAEHAPEKV
LDASWAALQE GQVFAVDIEI 601 RAQDRSGLLR DVSDALARHK LNVTAVQTQS
RDLEASMRFT LEVKQVNDLP 651 RVLAGLGDVK GVLSVTRL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 413>:
TABLE-US-00597 m117.seq (partial) 1 ..GTGAAACTCA AGAAATACAA
TGTCCATTTC GAAGTCGCCG GCCGCCCGAA 51 ACACATCTAC TCCATTTACA
AAAAAATGGT GAAGAAAAAA CTCAGCTTCG 101 ACGGCCTCTT TGACATCCGC
GCCGTGCGAA TTCTGGTTGA TACCGTCCCC 151 GAGTGTTACA CCACGCTGGG
TATCGTCCAC AGCCTCTGGC AGCCCATTCC 201 CGGCGAGTTC GACGACTACA
TCGCCAATCC CAAAGGCAAC GGCTATAAAA 251 GTTTGCACAC CGTCATCGTC
GGCCCGGAAG ACAAAGGCGT GGAAGTACAA 301 ATCCGCACCT TCGATATGCA
CCAATTCAAC GAATTCGGTG TCGCCGCCCA 351 CTGgCGTTAC AAAGAGGGCG
GCAAGGGCGA TTCCGCCTAC GAACAGAAAA 401 TCGCCTGGTT GCGCCAACTC
TTGGACTGGC GCGAAAACAT GGCGGAAAGC 451 GGCAAGGAAG ACCTCGCCGC
CGCCTTCAAA ACCGAGCTTT TCAACGACAC 501 GATTTATGTT TTGACCCCGC
ACGGCAAAGT CCTCTCCCTG CCCACGGGCG 551 CGACCCCCAT CGACTTCGCC
TACGCCCTGC ACAGCAGCAT CGGCGACCGT 601 TGCCGCGGTG CGAAAGTCGA
AGGGCAGATT GTGCCGCTGT CCACCCCGCT 651 CGAAAACGGA CAGCGCGTCG
AAATCATTAC CGCCAAAGAA GGGCATCCTT 701 CCGTCAACTG GCTTTACGAA
GGCTGGGTCA AATCCAACAA GGCAATCGGC 751 AAAATCCGCG CCTACATCCG
CCAGCAAAAC GCCGACACCG TGCGCGAAGA 801 AGGCCGCGTC CAACTCGACA
AACAGCTTGC CAAACTCACG CCCAAACCCA 851 ACCTGCAAGA GCTTGCCGAA
AATCTCGGCT ACAAAAAGCC AGAAGACCTC 901 TACACCGCCG TCGGACAAGG
CGAAATTTCC AACCGCGCCA TCCAAAAAGC 951 CTGCGGCACg CTGAACGAAC
CGCCGCCCGT ACCCGTCAGC GAAACCACCA 1001 TCGTCAAACA GTCCAAAATC
AAAAAAGGCG GCAAAAACGG CGTGCTCATC 1051 GACGGCGAAG ACGGTCTGAT
GACCACGCTT GCCAAATGCT GCAAACCCGC 1101 GCCGCCCGAC GATATTATCG
GCTTCGTTAC CCGCGAGCGC GgCATTTCAG 1151 TGCACCGCAA AwyyTkCyCG
TCTTTCCAAC ACCTCGCCGA ACACGCGCCC 1201 GAwAAAGTGC TGGACGCAAG
CTGGGCGGCA TTGCAGGAAG GACAAGTATT 1251 CGCCGTCGAT ATCGAAATCC
GCGCCCAAGA CCGCTCCGGG CTTTTGCGCG 1301 ACGTATCCGA CGCGCTCGCC
CGCCACAAAC TCAACGTTAC CGCCGTGCAA 1351 ACCCAGTCCC GCGACTTGGA
AGCCAGCATG AGGTTCACGC TCGAAGTCAA 1401 ACAAGTCAAC GACCTCCCGC
GCGTCCTCGC CAGCCTCGGC GACGTCAAAG 1451 GCGTATTGAG CGTTACCCGG
CTTTAA
This corresponds to the amino acid sequence <SEQ ID 414; ORF
117>:
TABLE-US-00598 m117.pep (partial) 1 ....VKLKKYNVHF EVAGRPKHIY
SIYKKMVKKK LSFDGLFDIR AVRILVDTVP 51 ECYTTLGIVH SLWQPIPGEF
DDYIANPKGN GYKSLHTVIV GPEDKGVEVQ 101 IRTFDMHQFN EFGVAAHWRY
KEGGKGDSAY EQKIAWLRQL LDWRENMAES 151 GKEDLAAAFK TELFNDTIYV
LTPHGKVLSL PTGATPIDFA YALHSSIGDR 201 CRGAKVEGQI VPLSTPLENG
QRVEIITAKE GHPSVNWLYE GWVKSNKAIG 251 KIRAYIRQQN ADTVREEGRV
QLDKQLAKLT PKPNLQELAE NLGYKKPEDL 301 YTAVGQGEIS NRAIQKACGT
LNEPPPVPVS ETTIVKQSKI KKGGKNGVLI 351 DGEDGLMTTL AKCCKPAPPD
DIIGFVTRER GISVHRKXXX SFQHLAEHAP 401 XKVLDASWAA LQEGQVFAVD
IEIRAQDRSG LLRDVSDALA RHKLNVTAVQ 451 TQSRDLEASM RFTLEVKQVN
DLPRVLASLG DVKGVLSVTR L*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 117
shows 97.6% identity over a 490 aa overlap with a predicted ORF
(ORF 117.ng) from N. gonorrhoeae:
TABLE-US-00599 m117/g117 10 20 30 m117.pep
VKLKKYNVHFEVAGRPKHIYSIYKKMVKKKL :|||||:||||||||||||||||||||||| g117
EKYREIALLLDEKRTERLEYIENFLDILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKKL 150
160 170 180 190 200 40 50 60 70 80 90 m117.pep
SFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117
SFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVG 210
220 230 240 250 260 100 110 120 130 140 150 m117.pep
PEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117
PEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESG 270
280 290 300 310 320 160 170 180 190 200 210 m117.pep
KEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117
KEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIV 330
340 350 360 370 380 220 230 240 250 260 270 m117.pep
PLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQ
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| g117
PLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAIGKIRAYIRQQNADTVREEGRVQ 390
400 410 420 430 440 280 290 300 310 320 330 m117.pep
LDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSE
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117
LDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSA 450
460 470 480 490 500 340 350 360 370 380 390 m117.pep
TTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKXXXS
||||||||||||||:|||||||||||||||||||||||||| ||||||||||||||: | g117
TTIVKQSKIKKGGKTGVLIDGEDGLMTTLAKCCKPAPPDDIAGFVTRERGISVHRKTCPS 510
520 530 540 550 560 400 410 420 430 440 450 m117.pep
FQHLAEHAPXKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQT
|:||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| g117
FRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQT 570
580 590 600 610 620 460 470 480 490 m117.pep
QSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRLX
||||||||||||||||||||||||||:|||||||||||||| g117
QSRDLEASMRFTLEVKQVNDLPRVLAGLGDVKGVLSVTRLX 630 640 650 660
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 415>:
TABLE-US-00600 a117.seq 1 ATGGTTCATG AACTCGACCT GCTCCCCGAT
GCCGTCGCCG CCACCCTGCT 51 TGCCGACATC GGACGCTACG TCCCCGACTG
GAACCTATTG GTTTCCGAAC 101 GCTGCAACAG TACCGTCGCC GAGCTGGTCA
AAGGTGTGGA CGAAGTGCAG 151 AAACTCACCC ACTTCGCCCG GGTGGACAGC
CTCGCCACGC CGGAAGAACG 201 CGCCCAGCAG GCAGAAACTA TGCGGAAAAT
GCTGCTGGCG ATGGTTACCG 251 ACATCCGCGT CGTGTTAATC AAACTGGCGA
TGCGTACGCG CACCCTGCAA 301 TTTTTAAGCA ACGCCCCCGA CAGCCCCGAA
AAACGCGCCG TCGCCAAAGA 351 AACCCTCGAC ATCTTCGCCC CGCTCGCCAA
CCGTTTGGGC GTGTGGCAGC 401 TCAAATGGCA GCTCGAAGAT TTGGGCTTCC
GCCATCAAGA ACCCGAAAAA 451 TACCGCGAAA TCGCCCTGCT TTTGGACGAA
AAACGCACCG AACGCCTCGA 501 ATACATCGAA AACTTCCTTA ATATCCTGCG
TACGGAACTC AAAAAATACA 551 ATATCCACTT TGAAGTCGCC GGCCGTCCGA
AACACATCTA CTCCATTTAC 601 AAAAAAATGG TGAAGAAAAA ACTCAGCTTC
GACGGGTTGT TCGACATCCG 651 CGCCGTGCGG ATTCTGGTTG ATACCGTCCC
CGAGTGTTAC ACCACACTGG 701 GCATTGTCCA CAGCCTCTGG CAGCCCATTC
CCGGCGAGTT CGACGACTAC 751 ATCGCCAACC CGAAAGGCAA CGGCTATAAA
AGTTTGCACA CCGTCATCGT 801 CGGCCCGGAA GACAAAGGCG TGGAAGTGCA
AATCCGCACC TTCGATATGC 851 ACCAATTCAA CGAATTCGGT GTCGCCGCGC
ACTGGCGTTA CAAAGAGGGC 901 GGCAAAGGCG ATTCCGCCTA CGAACAAAAA
ATCGCCTGGT TACGCCAACT 951 TTTGGACTGG CGCGAAAACA TGGCGGAAAG
CGGCAAGGAA GACCTCGCCG 1001 CCGCCTTCAA AACCGAGCTT TTCAACGACA
CGATTTATGT TTTGACCCCG 1051 CACGGCAAAG TCCTCTCCCT GCCCACAGGC
GCGACCCCCA TCGACTTCGC 1101 CTACGCCCTG CACAGCAGCA TCGGCGACCG
TTGCCGCGGT GCGAAAGTCG 1151 AAGGGCAGAT TGTGCCGCTG TCCACCCCGC
TCGAAAACGG ACAGCGTGTC 1201 GAAATCATTA CCGCCAAAGA AGGGCATCCT
TCCGTCAACT GGCTTTACGA 1251 AGGCTGGGTC AAATCCAACA AGGCAATCGG
CAAAATCCGC GCCTACATCC 1301 GCCAGCAAAA CGCCGACACC GTGCGCGAAG
AAGGCCGCGT CCAACTCGAC 1351 AAACAGCTTG CCAAACTCAC GCCCAAACCC
AACCTGCAAG AGCTTGCCGA 1401 AAATCTCGGC TACAAAAAGC CAGAAGACCT
CTACACCGCC GTCGGACAAG 1451 GCGAAATTTC CAACCGCGCC ATCCAAAAAG
CCTGCGGCAC GCTGAACGAA 1501 CCGCCGCCCG TACCCGTCAG CGAAACCACC
ATCGTCAAAC AGTCCAAAAT 1551 CAAAAAAGGC GGCAAAAACG GCGTGCTCAT
CGACGGCGAA GACGGTCTGA 1601 TGACCACGCT TGCCAAATGC TGCAAACCCG
CGCCGCCCGA CGACATTGTC 1651 GGCTTCGTTA CCCGCGATCG CGGCATTTCG
GTACACCGCA AAACCTGCCC 1701 CTCTTTCCGA CACCTCGCCG AACACGCGCC
CGAAAAAGTA CTGGACGCAA 1751 GTTGGGCGGC GTTGCAGGAA GGACAAGTGT
TCGCCGTCGA TATCGAAATC 1801 CGCGCCCAAG ACCGCTCCGG GCTTTTGCGC
GACGTATCCG ACGCGCTCGC 1851 CCGCCACAAA CTCAACGTTA CCGCCGTGCA
AACCCAGTCC CGCGACTTGG 1901 AAGCCAGCAT GAGGTTCACG CTCGAAGTCA
AACAAGTTAC CGACCTCCCA 1951 CGCGTCCTCG CCAGCCTCGG CGACGTCAAA
GGCGTATTGA GCGTTACCCG 2001 GCTTTAA
This corresponds to the amino acid sequence <SEQ ID 416; ORF
117.a>:
TABLE-US-00601 a117.pep 1 MVHELDLLPD AVAATLLADI GRYVPDWNLL
VSERCNSTVA ELVKGVDEVQ 51 KLTHFARVDS LATPEERAQQ AETMRKMLLA
MVTDIRVVLI KLAMRTRTLQ 101 FLSNAPDSPE KRAVAKETLD IFAPLANRLG
VWQLKWQLED LGFRHQEPEK 151 YREIALLLDE KRTERLEYIE NFLNILRTEL
KKYNIHFEVA GRPKHIYSIY 201 KKMVKKKLSF DGLFDIRAVR ILVDTVPECY
TTLGIVHSLW QPIPGEFDDY 251 IANPKGNGYK SLHTVIVGPE DKGVEVQIRT
FDMHQFNEFG VAAHWRYKEG 301 GKGDSAYEQK IAWLRQLLDW RENMAESGKE
DLAAAFKTEL FNDTIYVLTP 351 HGKVLSLPTG ATPIDFAYAL HSSIGDRCRG
AKVEGQIVPL STPLENGQRV 401 EIITAKEGHP SVNWLYEGWV KSNKAIGKIR
AYIRQQNADT VREEGRVQLD 451 KQLAKLTPKP NLQELAENLG YKKPEDLYTA
VGQGEISNRA IQKACGTLNE 501 PPPVPVSETT IVKQSKIKKG GKNGVLIDGE
DGLMTTLAKC CKPAPPDDIV 551 GFVTRDRGIS VHRKTCPSFR HLAEHAPEKV
LDASWAALQE GQVFAVDIEI 601 RAQDRSGLLR DVSDALARHK LNVTAVQTQS
RDLEASMRFT LEVKQVTDLP 651 RVLASLGDVK GVLSVTRL* m117/a117 98.0%
identity in 490 aa overlap 10 20 30 m117.pep
VKLKKYNVHFEVAGRPKHIYSIYKKMVKKKL :|||||:||||||||||||||||||||||| a117
EKYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKKL 150
160 170 180 190 200 40 50 60 70 80 90 m117.pep
SFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117
SFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVG 210
220 230 240 250 260 100 110 120 130 140 150 m117.pep
PEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117
PEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESG 270
280 290 300 310 320 160 170 180 190 200 210 m117.pep
KEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117
KEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIV 330
340 350 360 370 380 220 230 240 250 260 270 m117.pep
PLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117
PLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQ 390
400 410 420 430 440 280 290 300 310 320 330 m117.pep
LDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117
LDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSE 450
460 470 480 490 500 340 350 360 370 380 390 m117.pep
TTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKXXXS
|||||||||||||||||||||||||||||||||||||||||:|||||:||||||||: | a117
TTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTRDRGISVHRKTCPS 510
520 530 540 550 560 400 410 420 430 440 450 m117.pep
FQHLAEHAPXKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQT
|:||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| a117
FRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQT 570
580 590 600 610 620 460 470 480 490 m117.pep
QSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRLX
||||||||||||||||||:|||||||||||||||||||||| a117
QSRDLEASMRFTLEVKQVTDLPRVLASLGDVKGVLSVTRLX 630 640 650 660
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 417>:
TABLE-US-00602 g117-1.seq 1 ATGACCGCCA TCAGCCCGAT TCAAGACACG
CAAAGCGCGA CCCTGCAAGA 51 ATTGCGCGAA TGGTTCGACA GCTACTGCGC
CGCTCTGCCG GACAACGATA 101 AAAACCTCAT CGGTACCGCA TGGTCGCTGG
CGCAGGAACA TTATCCTGCC 151 GATGCCGCCA CGCCGTATGG CGAGCCGCTG
CCCGACCACT TCCTCGGCGC 201 GGCGCAAATG GTCGACGAAC TCGACCTGCT
GCCCGATGCC GTCGCCGCCA 251 CCCTGCTTGC CGACATCGGA CGCTACGTCC
CCGATTGGAA CCTATTGGTT 301 TCCGAGCGCT GCAACAGCAC CGTCGCCGAG
CTGGTCAAAG GTGTGGACGA 351 AGTGCAGAAA CTTACCCACT TCGCCCGGGT
GGACAGCCTC GCCACGCCGG 401 AAGAACGCGC ACAGCAAGCG GAAACCATGC
GGAAAATGCT GCTGGCGATG 451 GTTACCGACA TCCGCGTCGT ATTAATCAAA
CTGGCGATGC GTACGCGCAC 501 CCTGCAATTT TTAAGCAACG CCCCCGACAG
CCCTGAAAAA CGCGCCGTCG 551 CCAAAGAAAC CCTCGACATC TTCGCCCCGC
TCGCCAACCG CTTGGGCGTG 601 TGGCAGCTCA AATGGCAGCT CGAAGATTTG
GGCTTCCGCC ATCAAGAACC 651 CGAAAAATAC CGCGAAATCG CCCTGCTTTT
GGACGAAAAA CGCACCGAAC 701 GCCTCGAATA CATCGAAAAC TTCCTCGATA
TCCTGCGTAC GGAACTCAAA 751 AAATACAATA TCCACTTTGA AGTCGCCGGC
CGTCCGAAAC ACATCTACTC 801 CATTTACAAA AAAATGGTGA AGAAAAAACT
CAGCTTCGAC GGCCTGTTCG 851 ACATCCGCGC CGTGCGGATT CTGGTCGATA
CCGTCCCCGA GTGTTACACC 901 ACGCTGGGCA TCGTCCACAG CCTCTGGCAG
CCCATTCCCG GCGagttCGA 951 cgactACATC GCCAACCCCA AAGgcaACGg
ttATAAAAGt TTGCACACCG 1001 TCATCGTcgg cccGGAagaa aaaggtgtgg
aagtgcAAAT CCGCACCTTC 1051 GATATGCacc AATTCaaCga ATTCGGTGTC
GCCGCCCACT GGCGTTACAA 1101 AGAAGGCGGC AAAGGCGATT CCGCCTACGA
ACAAAAAATC GCCTGGTTGC 1151 GCCAACTCTT GGACTGGCGC GAAAATATGG
CGGAAAGCGG CAAGGAAGAC 1201 CTCGCCGCCG CCTTCAAAAC CGAGCTTTTC
AACGACACGA TTTATGTTTT 1251 GACCCCGCAC GGCAAAGTCC TCTCTCTGCC
AACGGGCGCA ACCCCCATCG 1301 ACTTCGCCTA CGCCCTGCAC AGCAGCATCG
GCGACCGCTG CCGGGGCGCG 1351 AAAGTCGAAG GGCAGATTGT GCCGCTGTCC
ACCCCGCTCG AAAACGGACA 1401 GCGCGTCGAA ATCATTACCG CCAAAGAAGG
GCATCCTTCC GTCAACTGGC 1451 TTTACGAAGG CTGGGTCAAA TCCGGCAAGG
CCATCGGCAA AATCCGCGCC 1501 TACATCCGCC AGCAAAACGC CGACACCGTG
CGCGAAGAAG GCCGTGTCCA 1551 ACTCGACAAG CAGCTTGCCA AACTCACGCC
CAAACCCAAC CTGCAAGAGC 1601 TTGCCGAAAA TCTCGGCTAC AAAAAGCCAG
AAGACCTCTA CACCGCCGTC 1651 GGACAAGGCG AAATTTCCAA CCGCGCCATC
CAAAAAGCCT GCGGCACGCT 1701 GAACGAACCG CCGCCCGTGC CCGTCAGCGC
AACCACCATC GTCAAACAGT 1751 CCAAAATCAA AAAAGGTGGC AAAACCGGCG
TGCTCATCGA CGGCGAAGAC 1801 GGCTTGATGA CCACGCTTGC CAAATGCTGC
AAACCCGCGC CGCCCGACGA 1851 TATTGCCGGC TTCGTTACCC GCGAGCGCGG
CATTTCCGTC CACCGCAAAA 1901 CCTGCCCCTC TTTCCGACAC CTTGCCGAAC
ACGCGCCCGA AAAAGTACTG 1951 GACGCAAGTT GGGCGGCGTT GCAGGAAGGG
CAAGTGTTCG CCGTCGATAT 2001 CGAAATCCGC GCCCAAGACC GCTCCGGGCT
TTTGCGCGAC GTATCCGACG 2051 CGCTCGCCCG CCACAAACTC AACGTTACCG
CCGTGCAAAC CCAGTCCCGC 2101 GACTTGGAAG CCAGCATGAG GTTCACGCTC
GAAGTCAAAC AAGTCAACGA 2151 CCTCCCGCGC GTCCTCGCCG GCCTCGGCGA
TGTCAAAGGC GTATTGAGCG 2201 TTACCCGGCT TTAA
This corresponds to the amino acid sequence <SEQ ID 418; ORF
117-1.ng>:
TABLE-US-00603 g117-1.pep 1 MTAISPIQDT QSATLQELRE WFDSYCAALP
DNDKNLIGTA WSLAQEHYPA 51 DAATPYGEPL PDHFLGAAQM VDELDLLPDA
VAATLLADIG RYVPDWNLLV 101 SERCNSTVAE LVKGVDEVQK LTHFARVDSL
ATPEERAQQA ETMRKMLLAM 151 VTDIRVVLIK LAMRTRTLQF LSNAPDSPEK
RAVAKETLDI FAPLANRLGV 201 WQLKWQLEDL GFRHQEPEKY REIALLLDEK
RTERLEYIEN FLDILRTELK 251 KYNIHFEVAG RPKHIYSIYK KMVKKKLSFD
GLFDIRAVRI LVDTVPECYT 301 TLGIVHSLWQ PIPGEFDDYI ANPKGNGYKS
LHTVIVGPEE KGVEVQIRTF 351 DMHQFNEFGV AAHWRYKEGG KGDSAYEQKI
AWLRQLLDWR ENMAESGKED 401 LAAAFKTELF NDTIYVLTPH GKVLSLPTGA
TPIDFAYALH SSIGDRCRGA 451 KVEGQIVPLS TPLENGQRVE IITAKEGHPS
VNWLYEGWVK SGKAIGKIRA 501 YIRQQNADTV REEGRVQLDK QLAKLTPKPN
LQELAENLGY KKPEDLYTAV 551 GQGEISNRAI QKACGTLNEP PPVPVSATTI
VKQSKIKKGG KTGVLIDGED 601 GLMTTLAKCC KPAPPDDIAG FVTRERGISV
HRKTCPSFRH LAEHAPEKVL 651 DASWAALQEG QVFAVDIEIR AQDRSGLLRD
VSDALARHKL NVTAVQTQSR 701 DLEASMRFTL EVKQVNDLPR VLAGLGDVKG
VLSVTRL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 419>:
TABLE-US-00604 m117-1.seq 1 ATGACCGCCA TCAGCCCGAT TCAAGACACG
CAAAGCGCGA CTCTGCAAGA 51 ATTGCGCGAA TGGTTCGACA GCTACTGCGC
CGCTCTGCCG GACAACGATA 101 AAAACCTCAT CGGTACCGCA TGGTTGCTGG
CGCAGGAACA TTACCCCGCC 151 GATGCCGCCA CGCCGTATGG CGAGCCGCTG
CCCGACCACT TCCTCGGCGC 201 GGCGCAAATG GTTCATGAAC TCGACCTGCT
CCCCGATGCC GTCGCCGCCA 251 CCCTGCTTGC CGACATCGGA CGCTACGTCC
CCGACTGGAA CCTATTGGTT 301 TCCGAACGCT GCAACAGTAC CGTCGCCGAG
CTGGTCAAAG GTGTGGACGA 351 AGTGCAGAAA CTCACCCACT TCGCCCGGGT
GGACAGCCTC GCCACGCCGG 401 AAGAACGCGC CCAGCAGGCA GAAACTATGC
GGAAAATGCT GCTGGCGATG 451 GTTACCGACA TCCGCGTCGT GTTAATCAAA
CTGGCGATGC GTACGCGCAC 501 CCTGCAATTT TTAAGCAACG CCCCCGACAG
CCCCGAAAAA CGCGCCGTCG 551 CCAAAGAAAC CCTCGACATC TTCGCCCCGC
TCGCCAACCG TTTGGGCGTG 601 TGGCAGCTCA AATGGCAGCT CGAAGATTTG
GGCTTCCGCC ATCAAAAGCC 651 CGAAAAATAC CGCGAAATCG CGCTGCTTTT
GGACGAAAAA CGCACCGAAC 701 GCCTCGAATA CATCGAAAAC TTCCTCAACA
TCCTGCGCGG TGAACTCAAG 751 AAATACAATG TCCATTTCGA AGTCGCCGGC
CGCCCGAAAC ACATCTACTC 801 CATTTACAAA AAAATGGTGA AGAAAAAACT
CAGCTTCGAC GGCCTCTTTG 851 ACATCCGCGC CGTGCGAATT CTGGTTGATA
CCGTCCCCGA GTGTTACACC 901 ACGCTGGGTA TCGTCCACAG CCTCTGGCAG
CCCATTCCCG GCGAGTTCGA 951 CGACTACATC GCCAATCCCA AAGGCAACGG
CTATAAAAGT TTGCACACCG 1001 TCATCGTCGG CCCGGAAGAC AAAGGCGTGG
AAGTACAAAT CCGCACCTTC 1051 GATATGCACC AATTCAACGA ATTCGGTGTC
GCCGCCCACT GGCGTTACAA 1101 AGAGGGCGGC AAGGGCGATT CCGCCTACGA
ACAGAAAATC GCCTGGTTGC 1151 GCCAACTCTT GGACTGGCGC GAAAACATGG
CGGAAAGCGG CAAGGAAGAC 1201 CTCGCCGCCG CCTTCAAAAC CGAGCTTTTC
AACGACACGA TTTATGTTTT 1251 GACCCCGCAC GGCAAAGTCC TCTCCCTGCC
CACGGGCGCG ACCCCCATCG 1301 ACTTCGCCTA CGCCCTGCAC AGCAGCATCG
GCGACCGTTG CCGCGGTGCG 1351 AAAGTCGAAG GGCAGATTGT GCCGCTGTCC
ACCCCGCTCG AAAACGGACA 1401 GCGCGTCGAA ATCATTACCG CCAAAGAAGG
GCATCCTTCC GTCAACTGGC 1451 TTTACGAAGG CTGGGTCAAA TCCAACAAGG
CAATCGGCAA AATCCGCGCC 1501 TACATCCGCC AGCAAAACGC CGACACCGTG
CGCGAAGAAG GCCGCGTCCA 1551 ACTCGACAAA CAGCTTGCCA AACTCACGCC
CAAACCCAAC CTGCAAGAGC 1601 TTGCCGAAAA TCTCGGCTAC AAAAAGCCAG
AAGACCTCTA CACCGCCGTC 1651 GGACAAGGCG AAATTTCCAA CCGCGCCATC
CAAAAAGCCT GCGGCACGCT 1701 GAACGAACCG CCGCCCGTAC CCGTCAGCGA
AACCACCATC GTCAAACAGT 1751 CCAAAATCAA AAAAGGCGGC AAAAACGGCG
TGCTCATCGA CGGCGAAGAC 1801 GGTCTGATGA CCACGCTTGC CAAATGCTGC
AAACCCGCGC CGCCCGACGA 1851 TATTATCGGC TTCGTTACCC GCGAGCGCGG
CATTTCAGTG CACCGCAAAA 1901 CCTGCCCGTC TTTCCAACAC CTCGCCGAAC
ACGCGCCCGA AAAAGTGCTG 1951 GACGCAAGCT GGGCGGCATT GCAGGAAGGA
CAAGTATTCG CCGTCGATAT 2001 CGAAATCCGC GCCCAAGACC GCTCCGGGCT
TTTGCGCGAC GTATCCGACG 2051 CGCTCGCCCG CCACAAACTC AACGTTACCG
CCGTGCAAAC CCAGTCCCGC 2101 GACTTGGAAG CCAGCATGAG GTTCACGCTC
GAAGTCAAAC AAGTCAACGA 2151 CCTCCCGCGC GTCCTCGCCA GCCTCGGCGA
CGTCAAAGGC GTATTGAGCG 2201 TTACCCGGCT TTAA
This corresponds to the amino acid sequence <SEQ ID 420; ORF
117-1>:
TABLE-US-00605 m117-1.pep 1 MTAISPIQDT QSATLQELRE WFDSYCAALP
DNDKNLIGTA WLLAQEHYPA 51 DAATPYGEPL PDHFLGAAQM VHELDLLPDA
VAATLLADIG RYVPDWNLLV 101 SERCNSTVAE LVKGVDEVQK LTHFARVDSL
ATPEERAQQA ETMRKMLLAM 151 VTDIRVVLIK LAMRTRTLQF LSNAPDSPEK
RAVAKETLDI FAPLANRLGV 201 WQLKWQLEDL GFRHQKPEKY REIALLLDEK
RTERLEYIEN FLNILRGELK 251 KYNVHFEVAG RPKHIYSIYK KMVKKKLSFD
GLFDIRAVRI LVDTVPECYT 301 TLGIVHSLWQ PIPGEFDDYI ANPKGNGYKS
LHTVIVGPED KGVEVQIRTF 351 DMHQFNEFGV AAHWRYKEGG KGDSAYEQKI
AWLRQLLDWR ENMAESGKED 401 LAAAFKTELF NDTIYVLTPH GKVLSLPTGA
TPIDFAYALH SSIGDRCRGA 451 KVEGQIVPLS TPLENGQRVE IITAKEGHPS
VNWLYEGWVK SNKAIGKIRA 501 YIRQQNADTV REEGRVQLDK QLAKLTPKPN
LQELAENLGY KKPEDLYTAV 551 GQGEISNRAI QKACGTLNEP PPVPVSETTI
VKQSKIKKGG KNGVLIDGED 601 GLMTTLAKCC KPAPPDDIIG FVTRERGISV
HRKTCPSFQH LAEHAPEKVL 651 DASWAALQEG QVFAVDIEIR AQDRSGLLRD
VSDALARHKL NVTAVQTQSR 701 DLEASMRFTL EVKQVNDLPR VLASLGDVKG VLSVTRL*
m117-1/g117-1 98.2% identity in 737 aa overlap 10 20 30 40 50 60
m117-1.pep
MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWLLAQEHYPADAATPYGEPL
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| g117-1
MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWSLAQEHYPADAATPYGEPL 10 20
30 40 50 60 70 80 90 100 110 120 m117-1.pep
PDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSERCNSTVAELVKGVDEVQK
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| g117-1
PDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSERCNSTVAELVKGVDEVQK 70 80
90 100 110 120 130 140 150 160 170 180 m117-1.pep
LTHFARVDSLATPEERAQQAELMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNAPDSPEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117-1
LTHFARVDSLATPEERAQQAELMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNAPDSPEK 130
140 150 160 170 180 190 200 210 220 230 240 m117-1.pep
RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQKPEKYREIALLLDEKRTERLEYIEN
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| g117-1
RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPEKYREIALLLDEKRTERLEYIEN 190
200 210 220 230 240 250 260 270 280 290 300 m117-1.pep
FLNILRGELKKYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT ||:|||
||||||:|||||||||||||||||||||||||||||||||||||||||||||| g117-1
FLDILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT 250
260 270 280 290 300 310 320 330 340 350 360 m117-1.pep
TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV
|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||| g117-1
TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEEKGVEVQIRTFDMHQFNEFGV 310
320 330 340 350 360 370 380 390 400 410 420 m117-1.pep
AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117-1
AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH 370
380 390 400 410 420 430 440 450 460 470 480 m117-1.pep
GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117-1
GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS 430
440 450 460 470 480 490 500 510 520 530 540 m117-1.pep
VNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| g117-1
VNWLYEGWVKSGKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY 490
500 510 520 530 540 550 560 570 580 590 600 m117-1.pep
KKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGED
|||||||||||||||||||||||||||||||||||| ||||||||||||||:|||||||| g117-1
KKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSATTIVKQSKIKKGGKTGVLIDGED 550
560 570 580 590 600 610 620 630 640 650 660 m117-1.pep
GLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKTCPSFQHLAEHAPEKVLDASWAALQEG
|||||||||||||||||| |||||||||||||||||||:||||||||||||||||||||| g117-1
GLMTTLAKCCKPAPPDDIAGFVTRERGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEG 610
620 630 640 650 660 670 680 690 700 710 720 m117-1.pep
QVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g117-1
QVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPR 670
680 690 700 710 720 730 m117-1.pep VLASLGDVKGVLSVTRLX
|||:|||||||||||||| g117-1 VLAGLGDVKGVLSVTRLX 730 m117-1/ReLA
sp|P55133|RELA_VIBSS GTP PYROPHOSPHOKINASE (ATP:GTP
3'-PYROPHOSPHOTRANSFERASE) (PPGPP SYNTHETASE I) >gi|537617
(U13769) ppGpp synthetase I [Vibrio sp.] Length = 744 Score = 536
bits (1366), Expect = e-151 Identities = 288/685 (42%), Positives =
432/685 (63%), Gaps = 31/685 (4%) Query: 74
LDLLPDAVAATLLADI---GRYVPDWNLLVSERCNSTVAELVKGVDEVQKLTHFARVDSL 130 L
+ D + A LL + G Y D + E + T+ LV+GV+++ ++ ++ S Sbjct: 68
LSMDADTLIAALLYPLVEGGCYSTD---ALKEEYSGTILHLVQGVEQMCAIS---QLKST 121
Query: 131
ATPEERAQQAETMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNAPDSPEKRAVAKETLDI 190 A
+A Q + +R+MLL+MV D R V+IKLA R L+ + + PD +RA A+E +I Sbjct: 122
AEETAQAAQVDNIRRMLLSMVDDFRCVVIKLAERICNLREVKDQPDEV-RRAAAQECANI 180
Query: 191
FAPLANRLGVWQLKWQLEDLGFRHQKPEKYREIALLLDEKRTERLEYIENFLNILRGELK 250
+APLANRLG+ QLKW++ED FR+Q P+ Y++IA L E+R +R +YI +F++ L +K Sbjct: 181
YAPLANRLGIGQLKWEIEDYAFRYQHPDTYKQIAKQLSERRIDREDYITHFVDDLSDAMK 240
Query: 251
KYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQ 310 N+
EV GRPKHIYSI++KM KK L FD LFD+RAVRI+ + + +CY LG+VH+ ++ Sbjct: 241
ASNIRAEVQGRPKHIYSIWRKMQKKSLEFDELFDVRAVRIVAEELQDCYAALGVVHTKYR 300
Query: 311
PIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEG- 369 +P
EFDDY+ANPK NGY+S+HTV++GPE K +E+QIRT MH+ +E GVAAHW+YKEG Sbjct: 301
HLPKEFDDYVANPKPNGYQSIHTVVLGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGT 360
Query: 370
--GKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLP 427 G
SAY++KI WLR+LL W+E M++SG ++ ++++F+D +Y TP G V+ LP Sbjct: 361
ASGGAQSAYDEKINWLRKLLAWQEEMSDSG--EMLDELRSQVFDDRVYAFTPKGDVVDLP 418
Query: 428
TGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYE- 486 +
ATP+DFAY +HS +G RC GAKVEG+IVP + L+ G +VEIIT KE +PS +WL Sbjct: 419
SNATPLDFAYHIHSEVGHRCIGAKVEGRIVPFTYHLQMGDQVEIITQKEPNPSRDWLNPN 478
Query: 487
-GWVKSNKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKL--TPKPNLQELAENLGYKKP 543
G+V S++A K+ A+ R+Q+ D G+ L+ +L K+ T K A+ K P Sbjct: 479
LGFVTSSRARAKVHAWFRKQDRDKNIIAGKEILEAELVKIHATLKDAQYYAAKRFNVKSP 538
Query: 544
EDLYTAVGQGEIS-NRAIQKACGTLNEPPPVPVSETTIVKQSKI--------KKGGKNGV 594
E+LY +G G++ N+ I +N+P + + K S+ KK ++ V Sbjct: 539
EELYAGIGSGDLRINQVINHINALVNKPTAEEEDQQLLEKLSEASNKQATSHKKPQRDAV 598
Query: 595
LIDGEDGLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKTCPSFQHLAEHAPEKVLDASW 654
+++G D LMT LA+CC+P P DDI GFVT+ RGISVHR C + L HAPE+++D W Sbjct: 599
VVEGVDNLMTHLARCCQPIPGDDIQGFVTQGRGISVHRMDCEQLEELRHHAPERIIDTVW 658
Query: 655
AALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQ--SRDLEASMRFTLEV 712 G
+ + + + A +R+GLL+++++ L K+ V ++++ + + M F LE+ Sbjct: 659
GGGFVGN-YTITVRVTASERNGLLKELTNTLMNEKVKVAGMKSRVDYKKQMSIMDFELEL 717
Query: 713 KQVNDLPRVLASLGDVKGVLSVTRL 737 + L RVL + VK V RL Sbjct:
718 TDLEVLGRVLKRIEQVKDVAEAKRL 742
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 421>:
TABLE-US-00606 a117-1.seq 1 ATGACCGCCA TCAGCCCGAT TCAAGACACG
CAAAGCGCGA CTCTGCAAGA 51 ATTGCGCGAA TGGTTCGACA GCTACTGCAC
CGCGCTGCCG AACAACGATA 101 AAAAACTTGT CTTAGCCGCC CGTTCGCTGG
CGGAAGCACA TTACCCCGCC 151 GATGCCGCCA CGCCGTATGG CGAACCGCTG
CCCGACCACT TCCTCGGCGC 201 GGCGCAAATG GTTCATGAAC TCGACCTGCT
CCCCGATGCC GTCGCCGCCA 251 CCCTGCTTGC CGACATCGGA CGCTACGTCC
CCGACTGGAA CCTATTGGTT 301 TCCGAACGCT GCAACAGTAC CGTCGCCGAG
CTGGTCAAAG GTGTGGACGA 351 AGTGCAGAAA CTCACCCACT TCGCCCGGGT
GGACAGCCTC GCCACGCCGG 401 AAGAACGCGC CCAGCAGGCA GAAACTATGC
GGAAAATGCT GCTGGCGATG 451 GTTACCGACA TCCGCGTCGT GTTAATCAAA
CTGGCGATGC GTACGCGCAC 501 CCTGCAATTT TTAAGCAACG CCCCCGACAG
CCCCGAAAAA CGCGCCGTCG 551 CCAAAGAAAC CCTCGACATC TTCGCCCCGC
TCGCCAACCG TTTGGGCGTG 601 TGGCAGCTCA AATGGCAGCT CGAAGATTTG
GGCTTCCGCC ATCAAGAACC 651 CGAAAAATAC CGCGAAATCG CCCTGCTTTT
GGACGAAAAA CGCACCGAAC 701 GCCTCGAATA CATCGAAAAC TTCCTTAATA
TCCTGCGTAC GGAACTCAAA 751 AAATACAATA TCCACTTTGA AGTCGCCGGC
CGTCCGAAAC ACATCTACTC 801 CATTTACAAA AAAATGGTGA AGAAAAAACT
CAGCTTCGAC GGGTTGTTCG 851 ACATCCGCGC CGTGCGGATT CTGGTTGATA
CCGTCCCCGA GTGTTACACC 901 ACACTGGGCA TTGTCCACAG CCTCTGGCAG
CCCATTCCCG GCGAGTTCGA 951 CGACTACATC GCCAACCCGA AAGGCAACGG
CTATAAAAGT TTGCACACCG 1001 TCATCGTCGG CCCGGAAGAC AAAGGCGTGG
AAGTGCAAAT CCGCACCTTC 1051 GATATGCACC AATTCAACGA ATTCGGTGTC
GCCGCGCACT GGCGTTACAA 1101 AGAGGGCGGC AAAGGCGATT CCGCCTACGA
ACAAAAAATC GCCTGGTTAC 1151 GCCAACTTTT GGACTGGCGC GAAAACATGG
CGGAAAGCGG CAAGGAAGAC 1201 CTCGCCGCCG CCTTCAAAAC CGAGCTTTTC
AACGACACGA TTTATGTTTT 1251 GACCCCGCAC GGCAAAGTCC TCTCCCTGCC
CACAGGCGCG ACCCCCATCG 1301 ACTTCGCCTA CGCCCTGCAC AGCAGCATCG
GCGACCGTTG CCGCGGTGCG 1351 AAAGTCGAAG GGCAGATTGT GCCGCTGTCC
ACCCCGCTCG AAAACGGACA 1401 GCGTGTCGAA ATCATTACCG CCAAAGAAGG
GCATCCTTCC GTCAACTGGC 1451 TTTACGAAGG CTGGGTCAAA TCCAACAAGG
CAATCGGCAA AATCCGCGCC 1501 TACATCCGCC AGCAAAACGC CGACACCGTG
CGCGAAGAAG GCCGCGTCCA 1551 ACTCGACAAA CAGCTTGCCA AACTCACGCC
CAAACCCAAC CTGCAAGAGC 1601 TTGCCGAAAA TCTCGGCTAC AAAAAGCCAG
AAGACCTCTA CACCGCCGTC 1651 GGACAAGGCG AAATTTCCAA CCGCGCCATC
CAAAAAGCCT GCGGCACGCT 1701 GAACGAACCG CCGCCCGTAC CCGTCAGCGA
AACCACCATC GTCAAACAGT 1751 CCAAAATCAA AAAAGGCGGC AAAAACGGCG
TGCTCATCGA CGGCGAAGAC 1801 GGTCTGATGA CCACGCTTGC CAAATGCTGC
AAACCCGCGC CGCCCGACGA 1851 CATTGTCGGC TTCGTTACCC GCGATCGCGG
CATTTCGGTA CACCGCAAAA 1901 CCTGCCCCTC TTTCCGACAC CTCGCCGAAC
ACGCGCCCGA AAAAGTACTG 1951 GACGCAAGTT GGGCGGCGTT GCAGGAAGGA
CAAGTGTTCG CCGTCGATAT 2001 CGAAATCCGC GCCCAAGACC GCTCCGGGCT
TTTGCGCGAC GTATCCGACG 2051 CGCTCGCCCG CCACAAACTC AACGTTACCG
CCGTGCAAAC CCAGTCCCGC 2101 GACTTGGAAG CCAGCATGAG GTTCACGCTC
GAAGTCAAAC AAGTTACCGA 2151 CCTCCCACGC GTCCTCGCCA GCCTCGGCGA
CGTCAAAGGC GTATTGAGCG 2201 TTACCCGGCT TTAA
This corresponds to the amino acid sequence <SEQ ID 422; ORF
117-1.a>:
TABLE-US-00607 a117-1.pep 1 MTAISPIQDT QSATLQELRE WFDSYCTALP
NNDKKLVLAA RSLAEAHYPA 51 DAATPYGEPL PDHFLGAAQM VHELDLLPDA
VAATLLADIG RYVPDWNLLV 101 SERCNSTVAE LVKGVDEVQK LTHFARVDSL
ATPEERAQQA ETMRKMLLAM 151 VTDIRVVLIK LAMRTRTLQF LSNAPDSPEK
RAVAKETLDI FAPLANRLGV 201 WQLKWQLEDL GFRHQEPEKY REIALLLDEK
RTERLEYIEN FLNILRTELK 251 KYNIHFEVAG RPKHIYSIYK KMVKKKLSFD
GLFDIRAVRI LVDTVPECYT 301 TLGIVHSLWQ PIPGEFDDYI ANPKGNGYKS
LHTVIVGPED KGVEVQIRTF 351 DMHQFNEFGV AAHWRYKEGG KGDSAYEQKI
AWLRQLLDWR ENMAESGKED 401 LAAAFKTELF NDTIYVLTPH GKVLSLPTGA
TPIDFAYALH SSIGDRCRGA 451 KVEGQIVPLS TPLENGQRVE IITAKEGHPS
VNWLYEGWVK SNKAIGKIRA 501 YIRQQNADTV REEGRVQLDK QLAKLTPKPN
LQELAENLGY KKPEDLYTAV 551 GQGEISNRAI QKACGTLNEP PPVPVSETTI
VKQSKIKKGG KNGVLIDGED 601 GLMTTLAKCC KPAPPDDIVG FVTRDRGISV
HRKTCPSFRH LAEHAPEKVL 651 DASWAALQEG QVFAVDIEIR AQDRSGLLRD
VSDALARHKL NVTAVQTQSR 701 DLEASMRFTL EVKQVTDLPR VLASLGDVKG VLSVTRL*
a117-1/m117-1 97.7% identity in 737 aa overlap 10 20 30 40 50 60
m117-1.pep
MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWLLAQEHYPADAATPYGEPL
||||||||||||||||||||||||||:|||:|||:|: :| ||: |||||||||||||| a117-1
MTAISPIQDTQSATLQELREWFDSYCLALPNNDKKLVLAARSLAEAHYPADAATPYGEPL 10 20
30 40 50 60 70 80 90 100 110 120 m117-1.pep
PDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSERCNSTVAELVKGVDEVQK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
PDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSERCNSTVAELVKGVDEVQK 70 80
90 100 110 120 130 140 150 160 170 180 m117-1.pep
LTHFARVDSLATPEERAQQAELMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNAPDSPEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
LTHFARVDSLATPEERAQQAELMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNAPDSPEK 130
140 150 160 170 180 190 200 210 220 230 240 m117-1.pep
RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQKPEKYREIALLLDEKRTERLEYIEN
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a117-1
RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPEKYREIALLLDEKRTERLEYIEN 190
200 210 220 230 240 250 260 270 280 290 300 m117-1.pep
FLNILRGELKKYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT ||||||
||||||:|||||||||||||||||||||||||||||||||||||||||||||| a117-1
FLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT 250
260 270 280 290 300 310 320 330 340 350 360 m117-1.pep
TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV 310
320 330 340 350 360 370 380 390 400 410 420 m117-1.pep
AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH 370
380 390 400 410 420 430 440 450 460 470 480 m117-1.pep
GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
GKVLSLPTGATPIDFAYALHSSIGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGHPS 430
440 450 460 470 480 490 500 510 520 530 540 m117-1.pep
VNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
VNWLYEGWVKSNKAIGKIRAYIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGY 490
500 510 520 530 540 550 560 570 580 590 600 m117-1.pep
KKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGED
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a117-1
KKPEDLYTAVGQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGED 550
560 570 580 590 600 610 620 630 640 650 660 m117-1.pep
GLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKTCPSFQHLAEHAPEKVLDASWAALQEG
||||||||||||||||||:|||||:|||||||||||||:||||||||||||||||||||| a117-1
GLMTTLAKCCKPAPPDDIVGFVTRDRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEG 610
620 630 640 650 660 670 680 690 700 710 720 m117-1.pep
QVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a117-1
QVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVKQVTDLPR 670
680 690 700 710 720 730 m117-1.pep VLASLGDVKGVLSVTRLX
|||||||||||||||||| a117-1 VLASLGDVKGVLSVTRLX 730
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 423>:
TABLE-US-00608 g118.seq 1 ATGTGCGAGT TCAAGGATTT TAGAAGAAAC
ATCCCTTGTT TTGAAGAGTA 51 TGACGAAAAT TCATTTATTG GCAAATGGTA
TGATGACGGG GTGTGGGATG 101 ATGAAGAATA TTGGAAGCTG GAGAATGATT
TAATcgaGGT TAGGAGAAAA 151 TATCCTTATC CGATGGATAT ACCAAGGGAT
ATTGTGATTG GAATCGGTAC 201 CATTATTGAT TTTTTAATGG TTCCAAATTG
GGAGCTTTTT GAAATTAAAG 251 CTTCCCCTTG GTTGCCTGAT AGCGTGGGAA
TTCATGAACG TTATGAAAGA 301 TTCACAACGA TGCTCCGTTA TATTTTTACC
GAGAAAGACA TAGTCAACGT 351 GCGATTTGAT TATTACAaCA AAAAATAG
This corresponds to the amino acid sequence <SEQ ID 424; ORF
118.ng>:
TABLE-US-00609 g118.pep 1 MCEFKDFRRN IPCFEEYDEN SFIGKWYDDG
VWDDEEYWKL ENDLIEVRRK 51 YPYPMDIPRD IVIGIGTIID FLMVPNWELF
EIKASPWLPD SVGIHERYER 101 FTTMLRYIFT EKDIVNVRFD YYNKK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 425>:
TABLE-US-00610 m118.seq 1 ATGTGTGAGT TCAAGGATAT TATAAGAAAC
GTTCCTTATT TTGAGGGGTA 51 TGACGAAAAT TCATTTATTG GCAAATGGTA
TGATGACGGG GTGTGGGATG 101 ATGAAGAATA TTGGAAGTTG GAGAATGATT
TAATCGAGGT TAGAAAAAAA 151 TATCCTTATC CGATGGACAT ACCAAGATAT
GTTGTCATTG GAATCGGTAC 201 CATTATTGAT TTCTTAATGG TTCCAAATTG
GAAACTTTTT GAAATTAAAG 251 CTTCCCCTTG GTTGCCTGAT AGTGTGGGAA
TTCATGAACG TTATGAAAGA 301 TTCACAACGA TGCTCCGTTA TATTTTTACC
GAGAAAGACA TAGTCAACGT 351 GCGATTTGAT TATTACAACA AAAAATAG
This corresponds to the amino acid sequence <SEQ ID 426; ORF
118>:
TABLE-US-00611 m118.pep 1 MCEFKDIIRN VPYFEGYDEN SFIGKWYDDG
VWDDEEYWKL ENDLIEVRKK 51 YPYPMDIPRY VVIGIGTIID FLMVPNWKLF
EIKASPWLPD SVGIHERYER 101 FTTMLRYIFT EKDIVNVRFD YYNKK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 118
shows 92.8% identity over a 125 aa overlap with a predicted ORF
(ORF 118.ng) from N. gonorrhoeae:
TABLE-US-00612 m118/g118 10 20 30 40 50 60 m118.pep
MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDLIEVRKKYPYPMDIPRY
||||||: ||:| || ||||||||||||||||||||||||||||||||:|||||||||| g118
MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENDLIEVRRKYPYPMDIPRD 10 20
30 40 50 60 70 80 90 100 110 120 m118.pep
VVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGIHERYERFTTMLRYIFTEKDIVNVRFD
:||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| g118
IVIGIGTIIDFLMVPNWELFEIKASPWLPDSVGIHERYERFTTMLRYIFTEKDIVNVRFD 70 80
90 100 110 120 m118.pep YYNKKX |||||| g118 YYNKKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 427>:
TABLE-US-00613 a118.seq 1 ATGTGTGAGT TCAAGGATTT TAGAAGAAAC
ATCCCTTGTT TTGAAGAGTA 51 TGACGAAAAT TCATTTATTG GCAAATGGTA
TGATGACGGG GTGTGGGATG 101 ATGAAGAATA TTGGAAATTG GAGAATGATT
TAATCGAGGT TAGAAAAAAA 151 TATCCTTATC CGATGGATAT ACCAAGGGAT
ATTGTGATTG GAATCGGTAC 201 CATTATTGAT TTTTTAATGG TTCCAAATTG
GGAGCTTTTT GAAATTAAAG 251 CTTCCCCTTG GTTGCCTGAT AGTGTGGGAA
TTCATGAACG TTATGAAAGA 301 TTCACAACGA TGCTCCGTTA TATTTTTACC
GAGAAAGACA TAGTCAACGT 351 GCGATTTGAT TATTACAACA AAAAATAG
This corresponds to the amino acid sequence <SEQ ID 428; ORF
118.a>:
TABLE-US-00614 a118.pep 1 MCEFKDFRRN IPCFEEYDEN SFIGKWYDDG
VWDDEEYWKL ENDLIEVRKK 51 YPYPMDIPRD IVIGIGTIID FLMVPNWELF
EIKASPWLPD SVGIHERYER 101 FTTMLRYIFT EKDIVNVRFD YYNKK* m118/a118
93.6% identity in 125 aa overlap 10 20 30 40 50 60 m118.pep
MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDLIEVRKKYPYPMDIPRY
||||||: ||:| || ||||||||||||||||||||||||||||||||||||||||||| a118
MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENDLIEVRKKYPYPMDIPRD 10 20
30 40 50 60 70 80 90 100 110 120 m118.pep
VVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGIHERYERFTTMLRYIFTEKDIVNVRFD
:||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| a118
IVIGIGTIIDFLMVPNWELFEIKASPWLPDSVGIHERYERFTTMLRYIFTEKDIVNVRFD 70 80
90 100 110 120 m118.pep YYNKKX |||||| a118 YYNKKX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 429>:
TABLE-US-00615 g120.seq 1 ATGATGAAGA CTTTTAAAAA TATATTTTCC
GCCGCCATTT TGTCCGCCGC 51 CCTGCCGTGC GCGTATGCGG CAAGGCTACC
CCAATCCGCC GTGCTGCACT 101 ATTCCGGCAG CTACGGCATT CCCGCCACGA
TGACATTTGA ACGCAGCGGC 151 AATGCTTACA AAATCGTTTC GACGATTAAA
GTGCCGCTAT ACAATATCCG 201 TTTCGAATCC GGCGGTACGG TTGTCGGCAA
TACCCTGCAC CCTGCCTACT 251 ATAAAGACAT ACGCAGGGGC AAACTGTATG
CGGAAGCCAA ATTCGCCGAC 301 GGCAGCGTAA CCTACGGCAA AGCGGGCGAG
AGCAAAACCG AGCAAAGCCC 351 CAAGGCTATG GATTTGTTCA CGCTTGCCTG
GCAGTTGGCG GCAAATGACG 401 CGAAACTCCC CCCGGGTCTG AAAATCACCA
ACGGCAAAAA ACTTTATTCC 451 GTCGGCGGCC TGAATAAGGC GGGTACGGGA
AAATACAGCA Taggcggcgt 501 gGAAACCGAA GTCGTCAAAT ATCGGGTGCG
GCGCGGCGAC GATACGGTAA 551 CGTATTTCTT CGCACCGTCC CTGAACAATA
TTCCGGCACA AATCGGCTAT 601 ACCGAcgaCG GCAAAACCTA TACGCTGAAG
CTCAAATCGG TGCAGATCAA 651 CGGACAGGCC GCCAAACCGT AA
This corresponds to the amino acid sequence <SEQ ID 430; ORF
120.ng>:
TABLE-US-00616 g120.pep 1 MMKTFKNIFS AAILSAALPC AYAARLPQSA
VLHYSGSYGI PATMTFERSG 51 NAYKIVSTIK VPLYNIRFES GGTVVGNTLH
PAYYKDIRRG KLYAEAKFAD 101 GSVTYGKAGE SKTEQSPKAM DLFTLAWQLA
ANDAKLPPGL KITNGKKLYS 151 VGGLNKAGTG KYSIGGVETE VVKYRVRRGD
DTVTYFFAPS LNNIPAQIGY 201 TDDGKTYTLK LKSVQINGQA AKP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 431>:
TABLE-US-00617 m120.seq 1 ATGATGAAGA CTTTTAAAAA TATATTTTCC
GCCGCCATTT TGTCCGCCGC 51 CCTGCCGTGC GCGTATGCGG CAGGGCTGCC
CCAATCCGCC GTGCTGmACT 101 ATTCCGGCAG CTACGGCATT CCCGCCACGA
TGACATTTGA ACGCAGCGGC 151 AATGCTTACA AAATCGTTTC GACGATTAAA
GTGCCGCTAT ACAATATCCG 201 TTTCGAGTCC GGCGGTACGG TTGTCGGCAA
TACCCTGCAC CCTACCTACT 251 ATAGAGACAT ACGCAGGGGC AAACTGTATG
CGGAAGCcAA ATTCGCCGAC 301 GGCAGCGTAA CTTACGGCAA AGCGGGCGAG
AGCAAAACCG AGCAAAGCCC 351 CAAGGCTATG GATTTGTTCA CGCTTGCCTG
GCAGTTGGCG GCAAATGACG 401 CGAAACTCCC CCCGGGGCTG AAAATCACCA
ACGGCAAAAA ACTTTATTCC 451 GTCGGCGGTT TGAATAAGGC GGGTACAGGA
AAATACAGCA TAGGCGGCGT 501 GGAAACCGAA GTCGTCAAAT ATCGGGTGCG
GCGCGGCGAC GATGCGGTAA 551 TGTATTTCTT CGCACCGTCC CTGAACAATA
TTCCGGCACA AATCGGCTAT 601 ACCGACGACG GCAAAACCTA TACGCTGAAA
CTCAAATCGG TGCAGATCAA 651 CGGCCAGGCA GCCAAACCG
This corresponds to the amino acid sequence <SEQ ID 432; ORF
120>:
TABLE-US-00618 m120.pep 1 MMKTFKNIFS AAILSAALPC AYAAGLPQSA
VLXYSGSYGI PATMTFERSG 51 NAYKIVSTIK VPLYNIRFES GGTVVGNTLH
PTYYRDIRRG KLYAEAKFAD 101 GSVTYGKAGE SKTEQSPKAM DLFTLAWQLA
ANDAKLPPGL KITNGKKLYS 151 VGGLNKAGTG KYSIGGVETE VVKYRVRRGD
DAVMYFFAPS LNNIPAQIGY 201 TDDGKTYTLK LKSVQINGQA AKP
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 120
shows 97.3% identity over a 223 aa overlap with a predicted ORF
(ORF 120.ng) from N. gonorrhoeae:
TABLE-US-00619 m120/g120 10 20 30 40 50 60 m120.pep
MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLXYSGSYGIPATMTFERSGNAYKIVSTIK
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| g120
MMKTFKNIFSAAILSAALPCAYAARLPQSAVLHYSGSYGIPATMTFERSGNAYKIVSTIK 10 20
30 40 50 60 70 80 90 100 110 120 m120.pep
VPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGSVTYGKAGESKTEQSPKAM
|||||||||||||||||||||:||:||||||||||||||||||||||||||||||||||| g120
VPLYNIRFESGGTVVGNTLHPAYYKDIRRGKLYAEAKFADGSVTYGKAGESKTEQSPKAM 70 80
90 100 110 120 130 140 150 160 170 180 m120.pep
DLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTGKYSIGGVETEVVKYRVRRGD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g120
DLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTGKYSIGGVETEVVKYRVRRGD 130
140 150 160 170 180 190 200 210 220 m120.pep
DAVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQINGQAAKP |:|
||||||||||||||||||||||||||||||||||||||| g120
DTVTYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQINGQAAKPX 190 200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 433>:
TABLE-US-00620 a120.seq 1 ATGATGAAGA CTTTTAAAAA TATATTTTCC
GCCGCCATTT TGTCCGCCGC 51 CCTGCCGTGC GCGTATGCGG CAGGGCTGCC
CCAATCCGCC GTGCTGCACT 101 ATTCCGGCAG CTACGGCATT CCCGCCACGA
TGACATTTGA ACGCAGCGGC 151 AATGCTTACA AAATCGTTTC GACGATTAAA
GTGCCGCTAT ACAATATCCG 201 TTTCGAGTCC GGCGGTACGG TTGTCGGCAA
TACCCTGCAC CCTACCTACT 251 ATAGAGACAT ACGCAGGGGC AAACTGTATG
CGGAAGCCAA ATTCGCCGAC 301 GGCAGCGTAA CCTACGGCAA AGCGGGCGAG
AGCAAAACCG AGCAAAGCCC 351 CAAGGCTATG GATTTGTTCA CGCTTGCCTG
GCAGTTGGCG GCAAATGACG 401 CGAAACTCCC CCCGGGGCTG AAAATCACCA
ACGGCAAAAA ACTTTATTCC 451 GTCGGCGGTT TGAATAAGGC GGGTACAGGA
AAATACAGCA TAGGCGGCGT 501 GGAAACCGAA GTCGTCAAAT ATCGGGTGCG
GCGCGGCGAC GATGCGGTAA 551 TGTATTTCTT CGCACCGTCC CTGAACAATA
TTCCGGCACA AATCGGCTAT 601 ACCGACGACG GCAAAACCTA TACGCTGAAA
CTCAAATCGG TGCAGATCAA 651 CGGCCAGGCA GCCAAACCGT AA
This corresponds to the amino acid sequence <SEQ ID 434; ORF
120.a>:
TABLE-US-00621 a120.pep 1 MMKTFKNIFS AAILSAALPC AYAAGLPQSA
VLHYSGSYGI PATMTFERSG 51 NAYKIVSTIK VPLYNIRFES GGTVVGNTLH
PTYYRDIRRG KLYAEAKFAD 101 GSVTYGKAGE SKTEQSPKAM DLFTLAWQLA
ANDAKLPPGL KITNGKKLYS 151 VGGLNKAGTG KYSIGGVETE VVKYRVRRGD
DAVMYFFAPS LNNIPAQIGY 201 TDDGKTYTLK LKSVQINGQA AKP* m120/a120
99.6% identity in 223 aa overlap 10 20 30 40 50 60 m120.pep
MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLXYSGSYGIPATMTFERSGNAYKIVSTIK
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| a120
MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATMTFERSGNAYKIVSTIK 10 20
30 40 50 60 70 80 90 100 110 120 m120.pep
VPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGSVTYGKAGESKTEQSPKAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a120
VPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGSVTYGKAGESKTEQSPKAM 70 80
90 100 110 120 130 140 150 160 170 180 m120.pep
DLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTGKYSIGGVETEVVKYRVRRGD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a120
DLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTGKYSIGGVETEVVKYRVRRGD 130
140 150 160 170 180 190 200 210 220 m120.pep
DAVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQINGQAAKPX
|||||||||||||||||||||||||||||||||||||||||||| a120
DAVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQINGQAAKPX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 435>:
TABLE-US-00622 g121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATTATG
TCGGGAACCA GTATGGACGG 51 GGCGGATGCC GTGCTGGTAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCTGACC
GGTTGCGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCAC AGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCTCCGTGC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTtac
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACTGa cgcggatttT
TACCGTCggc gacttcCGCA 401 GCCGCGACCT TGCTGCCGGC GGacaAGGTG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA TGACAGGGAA
ACACGCGTGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGGCGCA CCCGCCTTCG 551 GCTTCGACAC AGGGCCGGGC AATATGCTGA
TGGAcgcgtg gacgcaggca 601 cacTGGcagc TGCCTTACGA CAAAAacggt
gcAAAGgcgg cacAAGGCAA 651 catatTGCcg cAACTGCTCG gcaggctGCT
CGCCcaccCG TATTTCTCAC 701 AACCCcaccc aaAAAGCACG GGgcGCGaac
TgtttgcccT AAattggctc 751 gaaacctAcc ttgacggcgg cgaaaaccga
tacgacgtat tgcggacgct 801 ttcccgattc accgcgcaaA ccgTttggga
cgccgtctca CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCTCAATG
GGTGGAGGCG gccgCATTtg 1001 cgtggttggC GGCGTGTTGG ATTAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCGACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 436; ORF
121.ng>:
TABLE-US-00623 g121.pep 1 METQLYIGIM SGTSMDGADA VLVRMDGGKW
LGAEGHAFTP YPDRLRRKLL 51 DLQDTGTDEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPC DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL AELTRIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRVVLNIGGI ANISVLPPGA
PAFGFDTGPG NMLMDAWTQA 201 HWQLPYDKNG AKAAQGNILP QLLGRLLAHP
YFSQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVWDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWLAACW INRIPGSPHK 351 ATGASKPCIL GAGYYY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 437>:
TABLE-US-00624 m121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CCAATTGCTG 151 GATTTGCAGG ACACAGGCGC AGACGAACTG
CACCGCAGCA GGATTTTGTC 201 GCAAGAACTC AGCCGCCTAT ATGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCACCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTTAC
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 401 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 451 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 501 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 551 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 601 xxxxxxCAGC TTCCTTACGA CAAAAACGGT
GCAAAGTCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACGCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCAT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGTTTT ACCGCGCAAA CCGTTTGCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGACG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAC CTGAACCTCG ATCCGCAATG
GGTGGAAGCC GCCGnATTTG 1001 CGTGGTTGGC GGCGTGTTGG ATTAATCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
AnCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 438; ORF
121>:
TABLE-US-00625 m121.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRQLL 51 DLQDTGADEL HRSRILSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL Axxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 151 xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx 201 xxQLPYDKNG AKSAQGNILP QLLDRLLAHP
YFAQRHPKST GRELFAINWL 251 ETYLDGGENR YDVLRTLSRF TAQTVCDAVS
HAAADARQMY ICDGGIRNPV 301 LMADLAECFG TRVSLHSTAD LNLDPQWVEA
AXFAWLAACW INRIPGSPHK 351 ATGASKPCIL XAGYYY*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 121 shows 73.5% identity over a 366 aa overlap with a
predicted ORF (ORF121.ng) from N. gonorrhoeae:
TABLE-US-00626 m121/g121 10 20 30 40 50 60 m121.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
||||||||||||||||||||||:||||||||||||||||||| ||||:||||||||:||| g121
METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDRLRRKLLDLQDTGTDEL 10 20
30 40 50 60 70 80 90 100 110 120 m121.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||| |||||||||||||||||||||||||||||| g121
HRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTVRHAPEHGYSIQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121.pep
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX | : :
: g121 AELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRVVLNIGGIANISVLPPGA
130 140 150 160 170 180 190 200 210 220 230 240 m121.pep
XXXXXXXXXXXXXXXXXXXXXXQLPYDKNGAKSAQGNILPQLLDRLLAHPYFAQRHPKST : :
||||||||||:|||||||||| ||||||||:| ||||| g121
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLGRLLAHPYFSQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121.pep
GRELFAINWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICDGGIRNPV
||||||:|||||||||||||||||||||||||||| |||||||||||||||| ||||||| g121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVWDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||||||||||||||||||||||||||| g121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWLAACWINRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121.pep XAGYYYX |||||| g121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 439>:
TABLE-US-00627 a121.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCGC GGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCGCCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCAGAC ACGCGCCGGA ACACAGTTAC
AGCGTACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CTCAGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CGACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGACCGGGC AATATGCTGA
TGGACGCGTG GATGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGATTC ACCGCGCAAA CCGTTTTCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCGCAATG
GGTAGAAGCC GCCGCGTTCG 1001 CATGGATGGC GGCGTGTTGG GTCAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 440; ORF
121.a>:
TABLE-US-00628 a121.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRKLL 51 DLQDTGADEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHSY SVQLADLPLL AERTQIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWMQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVFDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWMAACW VNRIPGSPHK 351 ATGASKPCIL GAGYYY* m121/a121 74.0%
identity in 366 aa overlap 10 20 30 40 50 60 m121.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a121
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRKLLDLQDTGADEL 10 20
30 40 50 60 70 80 90 100 110 120 m121.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||||||||||||||||||||||:||:|||||||| a121
HRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHSYSVQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121.pep
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
:|||: : a121
AERTQIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRAVLNIGGIANISVLPPDA 130
140 150 160 170 180 190 200 210 220 230 240 m121.pep
XXXXXXXXXXXXXXXXXXXXXXQLPYDKNGAKSAQGNILPQLLDRLLAHPYFAQRHPKST :
||||||||||:||||||||||||||||||||| |||| a121
PAFGFDTGPGNMLMDAWMQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121.pep
GRELFAINWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICDGGIRNPV
||||||:|||||||||||||||||||||||||||| ||||||||||||||| |||||| a121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVFDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| ||:||||:||||||||||||||||||| a121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWMAACWVNRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121.pep XAGYYYX |||||| a121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 441>:
TABLE-US-00629 m121-1.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CCAATTGCTG 151 GATTTGCAGG ACACAGGCGC AGACGAACTG
CACCGCAGCA GGATTTTGTC 201 GCAAGAACTC AGCCGCCTAT ATGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCACCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCCGAC ACGCGCCGGA ACACGGTTAC
AGCATACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CGCGGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCACTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CAACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGGCCGGGC AATATGCTGA
TGGACGCGTG GACGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGTTTT ACCGCGCAAA CCGTTTGCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAC CTGAACCTCG ATCCGCAATG
GGTGGAAGCC GCCGNATTTG 1001 CGTGGTTGGC GGCGTGTTGG ATTAATCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
ANCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 442; ORF
121-1>:
TABLE-US-00630 m121-1.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRQLL 51 DLQDTGADEL HRSRILSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHGY SIQLADLPLL AERTRIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDNRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWTQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVCDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAD LNLDPQWVEA
AXFAWLAACW INRIPGSPHK 351 ATGASKPCIL XAGYYY* m121-1/g121 95.6%
identity in 366 aa overlap 10 20 30 40 50 60 m121-1.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
||||||||||||||||||||||:||||||||||||||||||| |||:||||||||:||| g121
METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDRLRRKLLDLQDTGTDEL 10 20
30 40 50 60 70 80 90 100 110 120 m121-1.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||| ||||||||||||||||||||||||||||| g121
HRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTVRHAPEHGYSIQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121-1.pep
AERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRETRAVLNIGGIANISVLPPDA ||
||||||||||||||||||||||||||||||||||:||||:||||||||||||||| | g121
AELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRVVLNIGGIANISVLPPGA 130
140 150 160 170 180 190 200 210 220 230 240 m121-1.pep
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST
||||||||||||||||||||||||||||||||||||||||||| ||||||||:||||||| g121
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLGRLLAHPYFSQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121-1.pep
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICGGGIRNPV
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| g121
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVWDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121-1.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||||||||||||||||||||||||||| g121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWLAACWINRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121-1.pep XAGYYYX |||||| g121 GAGYYYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 443>:
TABLE-US-00631 a121-1.seq 1 ATGGAAACAC AGCTTTACAT CGGCATCATG
TCGGGAACCA GCATGGACGG 51 GGCGGATGCC GTACTGATAC GGATGGACGG
CGGCAAATGG CTGGGCGCGG 101 AAGGGCACGC CTTTACCCCC TACCCCGGCA
GGTTACGCCG CAAATTGCTG 151 GATTTGCAGG ACACAGGCGC GGACGAACTG
CACCGCAGCA GGATGTTGTC 201 GCAAGAACTC AGCCGCCTGT ACGCGCAAAC
CGCCGCCGAA CTGCTGTGCA 251 GTCAAAACCT CGCGCCGTCC GACATTACCG
CCCTCGGCTG CCACGGGCAA 301 ACCGTCAGAC ACGCGCCGGA ACACAGTTAC
AGCGTACAGC TTGCCGATTT 351 GCCGCTGCTG GCGGAACGGA CTCAGATTTT
TACCGTCGGC GACTTCCGCA 401 GCCGCGACCT TGCGGCCGGC GGACAAGGCG
CGCCGCTCGT CCCCGCCTTT 451 CACGAAGCCC TGTTCCGCGA CGACAGGGAA
ACACGCGCGG TACTGAACAT 501 CGGCGGGATT GCCAACATCA GCGTACTCCC
CCCCGACGCA CCCGCCTTCG 551 GCTTCGACAC AGGACCGGGC AATATGCTGA
TGGACGCGTG GATGCAGGCA 601 CACTGGCAGC TTCCTTACGA CAAAAACGGT
GCAAAGGCGG CACAAGGCAA 651 CATATTGCCG CAACTGCTCG ACAGGCTGCT
CGCCCACCCG TATTTCGCAC 701 AACCCCACCC TAAAAGCACG GGGCGCGAAC
TGTTTGCCCT AAATTGGCTC 751 GAAACCTACC TTGACGGCGG CGAAAACCGA
TACGACGTAT TGCGGACGCT 801 TTCCCGATTC ACCGCGCAAA CCGTTTTCGA
CGCCGTCTCA CACGCAGCGG 851 CAGATGCCCG TCAAATGTAC ATTTGCGGCG
GCGGCATCCG CAATCCTGTT 901 TTAATGGCGG ATTTGGCAGA ATGTTTCGGC
ACACGCGTTT CCCTGCACAG 951 CACCGCCGAA CTGAACCTCG ATCCGCAATG
GGTAGAAGCC GCCGCGTTCG 1001 CATGGATGGC GGCGTGTTGG GTCAACCGCA
TTCCCGGTAG TCCGCACAAA 1051 GCAACCGGCG CATCCAAACC GTGTATTCTG
GGCGCGGGAT ATTATTATTG 1101 A
This corresponds to the amino acid sequence <SEQ ID 444; ORF
121-1.a>:
TABLE-US-00632 a121-1.pep 1 METQLYIGIM SGTSMDGADA VLIRMDGGKW
LGAEGHAFTP YPGRLRRKLL 51 DLQDTGADEL HRSRMLSQEL SRLYAQTAAE
LLCSQNLAPS DITALGCHGQ 101 TVRHAPEHSY SVQLADLPLL AERTQIFTVG
DFRSRDLAAG GQGAPLVPAF 151 HEALFRDDRE TRAVLNIGGI ANISVLPPDA
PAFGFDTGPG NMLMDAWMQA 201 HWQLPYDKNG AKAAQGNILP QLLDRLLAHP
YFAQPHPKST GRELFALNWL 251 ETYLDGGENR YDVLRTLSRF TAQTVFDAVS
HAAADARQMY ICGGGIRNPV 301 LMADLAECFG TRVSLHSTAE LNLDPQWVEA
AAFAWMAACW VNRIPGSPHK 351 ATGASKPCIL GAGYYY* m121-1/a121-1 96.4%
identity in 366 aa overlap 10 20 30 40 50 60 m121-1.pep
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADEL
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a121-1
METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRKLLDLQDTGADEL 10 20
30 40 50 60 70 80 90 100 110 120 m121-1.pep
HRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLL
||||:|||||||||||||||||||||||||||||||||||||||||||:||:|||||||| a121-1
HRSRMLSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHSYSVQLADLPLL 70 80
90 100 110 120 130 140 150 160 170 180 m121-1.pep
AERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRETRAVLNIGGIANISVLPPDA
||||:||||||||||||||||||||||||||||||||:|||||||||||||||||||||| a121-1
AERTQIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRAVLNIGGIANISVLPPDA 130
140 150 160 170 180 190 200 210 220 230 240 m121-1.pep
PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| a121-1
PAFGFDTGPGNMLMDAWMQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKST 190
200 210 220 230 240 250 260 270 280 290 300 m121-1.pep
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICGGGIRNPV
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| a121-1
GRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVFDAVSHAAADARQMYICGGGIRNPV 250
260 270 280 290 300 310 320 330 340 350 360 m121-1.pep
LMADLAECFGTRVSLHSTADLNLDPQWVEAAXFAWLAACWINRIPGSPHKATGASKPCIL
|||||||||||||||||||:||||||||||| |||:||||:||||||||||||||||||| a121
LMADLAECFGTRVSLHSTAELNLDPQWVEAAAFAWMAACWVNRIPGSPHKATGASKPCIL 310
320 330 340 350 360 m121-1.pep XAGYYYX |||||| a121 GAGYYYX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 445>:
TABLE-US-00633 g122.seq 1 ATGGCTTTAC TGAGCATCCG CAAGCTGCAC
AAACAATACG GCAGCGTAAC 51 CGCCATCCAA TCCTTAGACT TGGACTTGGA
AAAAGGCGAA GtcatCGTAC 101 TGCTGGGCCC gTccggctgc ggCAAATCCA
CCCTcctgcg ctgcgtcaaC 151 GGTTTGGAGC CGCACCAagg cgGCAGCATC
GTGATGGACG GTgtcgGCGA 201 ATTCggcAAA GACGTTTCCT GGCAAACCGC
CCGGCAAAAa gtcggtatgg 251 tctttcaaag taacgAactg Tttgcccaca
tgaccgtcat cgAaaacatc 301 ttcttAggcC CGGTAAagga aCAAAAcCgc
gaccgtgccg aagcaGAGGC 351 gCAAGCCGGC AAactGttgg aacgcgTCGG
actgctAGAC CGCAAAAACG 401 CCTATCCGCG CGAACTTTCC GGCGGTCAGA
AACAGCGCAT CGCCATTGTC 451 CGCGCCCTGT GCCTGAATCC GGAAGTCATC
CTGCTGGACG AAATCACCGC 501 CGCACTTGAC CCCGAAATGG TGCGCGAAGT
CTTGGAAGTG GTTTTGGAAC 551 TCGCCCGCGA AGGGATGAGT ATGCTCATCG
TAACCCACGA AATGGGGTTC 601 GCACGCAAAG TTGCCGACCG CATCGTCTTT
ATGGACAAAG GCGGCATCGT 651 CGAATCGTCC GACCCCGAAA CCTTTTTTTC
CGCACCAAAA AGCGAACGCG 701 CCCGCCAATT TCTGGCAGGT ATGGACTACT GA
This corresponds to the amino acid sequence <SEQ ID 446; ORF
122.ng>:
TABLE-US-00634 g122.pep 1 MALLSIRKLH KQYGSVTAIQ SLDLDLEKGE
VIVLLGPSGC GKSTLLRCVN 51 GLEPHQGGSI VMDGVGEFGK DVSWQTARQK
VGMVFQSNEL FAHMTVIENI 101 FLGPVKEQNR DRAEAEAQAG KLLERVGLLD
RKNAYPRELS GGQKQRIAIV 151 RALCLNPEVI LLDEITAALD PEMVREVLEV
VLELAREGMS MLIVTHEMGF 201 ARKVADRIVF MDKGGIVESS DPETFFSAPK
SERARQFLAG MDY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 447>:
TABLE-US-00635 m122.seq 1 GTTGTCATGA TTAAAATCCG CAATATCCAT
AAGACCTTTG GCGAAAACAC 51 TATTTTGCGC GGCATCGATT TGGATGTGTG
CAAAGGGCAG GTGGTCGTCA 101 TCCTCGGGcC TTCCGGCTCA GGCAAAACGA
CGTTTCTGCG ATGCCTAAAC 151 GCGTTGGAAA TGCCCGAAGA CGGACAAATC
GAGTTCGACA ACGAGCGACC 201 GCTGAAAATC GATTTTTCTA AAAAACCAAG
CAAACACGAT ATTTTGGCAC 251 TGCGCCGCAA ATCAkGCATG GTGTTTCAAC
AATACAAyCT CTTTCCGCAC 301 AAAACCGCCT TGGAAAACGT AATGGAAGGA
CCGGTTGCCG TACAgGGCAA 351 GCCTGCCGCC CAAGCGCGCG AAGAGGCTCT
GAAACTGCTG GAAAAAGTCG 401 GCTTGGGCGA CAAAGTGGAT TTGTATCCCT
ACCAGCTTTC CGGCGGTCAG 451 CAGCAGCGCG TCGGCATTGC CCGCGCATTG
GCGATTCAGC CTGAACTGAT 501 GCTGTTTGAC GAACCGACTT CCGCGCTCGA
TCCTGAATTG GTGCAAGATG 551 TTTTGGATmC CATGAAGGAA TTGGCGCAAG
AAGGCTGGAC CATGGTTGTC 601 GTTACGCATG AAATCAAGTT CGCCTTAGAA
GTGGCAACCA CCGwCGTCGT 651 GATGGACrGC GGCGTTATTG TCGAACAAGG
CAGCCCGCAA GATTTGTTCG 701 ACCACCCCAA ACACGAACGG ACGCGGAGAT
TTTTAAGCCA AATCCAATCT 751 ACCAAGATTT GA
This corresponds to the amino acid sequence <SEQ ID 448; ORF
122>:
TABLE-US-00636 m122.pep 1 VVMIKIRNIH KTFGENTILR GIDLDVCKGQ
VVVILGPSGS GKTTFLRCLN 51 ALEMPEDGQI EFDNERPLKI DFSKKPSKHD
ILALRRKSXM VFQQYNLFPH 101 KTALENVMEG PVAVQGKPAA QAREEALKLL
EKVGLGDKVD LYPYQLSGGQ 151 QQRVGIARAL AIQPELMLFD EPTSALDPEL
VQDVLDXMKE LAQEGWTMVV 201 VTHEIKFALE VATTXVVMDX GVIVEQGSPQ
DLFDHPKHER TRRFLSQIQS 251 TKI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 122
shows 47.2% identity over a 246 aa overlap with a predicted ORF
(ORF 122.ng) from N. gonorrhoeae:
TABLE-US-00637 m122/g122 10 20 30 40 50 60 m122.pep
VVMIKIRNIHKTFGENTILRGIDLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQI
:::::||::|| :| | ::::|||: ||:|:|:||||| ||:|:|||:|:|| : |:| g122
MALLSIRKLHKQYGSVTAIQSLDLDLEKGEVIVLLGPSGCGKSTLLRCVNGLEPHQGGSI 10 20
30 40 50 60 70 80 90 100 110 120 m122.pep
EFDNERPLKIDFSKKPSKHDILALRRKSXMVFQQYNLFPHKTALENVMEGPVAVQGKPAA :|: :
| | : : |:| ||||: :|| | |::||:: ||| |:: | g122
VMDGVGEFGKDVSWQTA-------RQKVGMVFQSNELFAHMTVIENIFLGPVKEQNRDRA 70 80
90 100 110 130 140 150 160 170 180 m122.pep
QAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPEL :|: :|
||||:||| |: : || :|||||:||::|:||| ::||::|:|| |:|||||: g122
EAEAQAGKLLERVGLLDRKNAYPRELSGGQKQRIAIVRALCLNPEVILLDEITAALDPEM 120
130 140 150 160 170 190 200 210 220 230 240 m122.pep
VQDVLDXMKELAQEGWTMVVVTHEIKFALEVATTXVVMDXGVIVEQGSPQDLFDHPKHER |::||:
: |||:|| :|::||||: || :|| | || | |||:::|: :|: || || g122
VREVLEVVLELAREGMSMLIVTHEMGFARKVADRIVFMDKGGIVESSDPETFFSAPKSER 180
190 200 210 220 230 250 m122.pep TRRFLSQIQSTKIX :|:||: g122
ARQFLAGMDYX 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 449>:
TABLE-US-00638 a122.seq 1 GTTGTCATGA TTAAAATCCG CAATATCCAT
AAGACCTTCG GCAAAAATAC 51 CATTTTGCGC GGCATCAATT TGGATGTGTG
CAAAGGGCAG GTGGTCGTCA 101 TCCTCGGGCC TTCCGGCTCA GGCAAAACGA
CGTTTCTGCG ATGCCTAAAC 151 GCGTTGGAAA TGCCCGAAGA CGGACAAATC
GAGTTCGACA ACGAGCGACC 201 GCTGAAAATC GATTTTTCTA AAAAACCAAG
CAAACACGAT ATTTTGGCAC 251 TGCGCCGCAA ATCAGGCATG GTGTTTCAAC
AATACAACCT CTTTCCGCAC 301 AAAACCGCCT TGGAAAACGT GATGGAAGGA
CCGGTTGCCG TACAGGGCAA 351 GCCTGCCGCC CAAGCGCGCG AAGAGGCTCT
GAAACTGCTG GAAAAAGTCG 401 GCTTGGGCGA CAAAGTGGAT TTGTATCCCT
ACCAGCTTTC CGGCGGTCAG 451 CAGCAGCGCG TCGGCATTGC CCGAGCATTG
GCGATTCAGC CCGAGCTGAT 501 GTTGTTTGAC GAACCCACTT CCGCGCTTGA
CCCCGAGTTG GTGCAAGACG 551 TGTTGAACGC CATGAAGGAA TTGGCGCGGG
AAGGTTGGAC GATGGTCGTC 601 GTTACCCACG AAATCAAGTT CGCGCTGGAA
GTTGCCACGA CCGTTGTCGT 651 GATGGACGGC GGCGTTATCG TAGAGCAGGG
CAGCCCGAAA GAGTTGTTCG 701 ACCACCCCAA ACACGAACGG ACGCGGAGAT
TTTTAAGCCA AATCCAATCT 751 ACCAAGATTT GA
This corresponds to the amino acid sequence <SEQ ID 450; ORF
122.a>:
TABLE-US-00639 a122.pep 1 VVMIKIRNIH KTFGKNTILR GINLDVCKGQ
VVVILGPSGS GKTTFLRCLN 51 ALEMPEDGQI EFDNERPLKI DFSKKPSKHD
ILALRRKSGM VFQQYNLFPH 101 KTALENVMEG PVAVQGKPAA QAREEALKLL
EKVGLGDKVD LYPYQLSGGQ 151 QQRVGIARAL AIQPELMLFD EPTSALDPEL
VQDVLNAMKE LAREGWTMVV 201 VTHEIKFALE VATTVVVMDG GVIVEQGSPK
ELFDHPKHER TRRFLSQIQS 251 TKI* m122/a122 96.0% identity in 253 aa
overlap 10 20 30 40 50 60 m122.pep
VVMIKIRNIHKTFGENTILRGIDLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQI
||||||||||||||:|||||||:||||||||||||||||||||||||||||||||||||| a122
VVMIKIRNIHKTFGKNTILRGINLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQI 10 20
30 40 50 60 70 80 90 100 110 120 m122.pep
EFDNERPLKIDFSKKPSKHDILALRRKSXMVFQQYNLFPHKTALENVMEGPVAVQGKPAA
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| a122
EFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAA 70 80
90 100 110 120 130 140 150 160 170 180 m122.pep
QAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPEL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a122
QAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPEL 130
140 150 160 170 180 190 200 210 220 230 240 m122.pep
VQDVLDXMKELAQEGWTMVVVTHEIKFALEVATTXVVMDXGVIVEQGSPQDLFDHPKHER |||||:
|||||:||||||||||||||||||||| |||| |||||||||::||||||||| a122
VQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFDHPKHER 190
200 210 220 230 240 250 m122.pep TRRFLSQIQSTKIX |||||||||||||| a122
TRRFLSQIQSTKIX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 451>:
TABLE-US-00640 g122-1.seq 1 ATGATTAAAA TCCGCAATAT CCATAAGACC
TTTGGCGAAA ACACCATTTT 51 GCGCGGCATC GATTTGGATG TGGGCAAAGG
GCAGGTGGTC GTCATCCTCG 101 GGCCTTCCGG CTCGGGTAAA ACAACATTTC
TGCGCTGCCT AAACGCGTTG 151 GAAATGCCCG AAGACGGACA AATCGAGTTC
GACAACGCGC GGCCGTTACG 201 CATTGATTTT TCCAAAAAAA CAAGCAAACA
CGATATTTTG GCACTGCGCC 251 GCAAGTCCGG AATGGTATTC CAACAATACA
ACCTCTTCCC GCATAAAACC 301 GTGTTGGAAA ACGTGATGGA AGGGCCGGTT
GCCGTACAGG GCAAGCCTGC 351 CGCCCAAGCG CGCGAAGAGG CTTTGAAACT
GCTGGAAAAA GTCGGCTTGG 401 GCGATAAAGT GGATTTGTAT CCCTACCAGC
TTTCCGGCGG TCAGCAGCAG 451 CGTGTCGGTA TCGCCCGCGC ACTGGCGATT
CAGCCTGAAT TGATGCTGTT 501 TGACGAACCC ACTTCCGCGC TGGACCCCGA
GTTGGTGCAA GACGTGTTGG 551 ACGCCATGAA GGAATTGGCG CGGGAAGGTT
GGACGATGGT CGTCGTTACC 601 CACGAAATCA AGTTCACGCT GGAAGTTGCC
ACGAACGTCG TCGTGATGGA 651 CGGCGGCGTT ATCGTAGAGC AGGGCAGCCC
GAAAGAGTTG TTCGACCACC 701 TCAAACACGA ACGGACGCGG AGATTTTTAA
GCCAAATCCA ATCTGCCAAG 751 ATTTGA
This corresponds to the amino acid sequence <SEQ ID 452; ORF
122-1.ng>:
TABLE-US-00641 g122-1.pep 1 MIKIRNIHKT FGENTILRGI DLDVGKGQVV
VILGPSGSGK TTFLRCLNAL 51 EMPEDGQIEF DNARPLRIDF SKKTSKHDIL
ALRRKSGMVF QQYNLFPHKT 101 VLENVMEGPV AVQGKPAAQA REEALKLLEK
VGLGDKVDLY PYQLSGGQQQ 151 RVGIARALAI QPELMLFDEP TSALDPELVQ
DVLDAMKELA REGWTMVVVT 201 HEIKFTLEVA TNVVVMDGGV IVEQGSPKEL
FDHLKHERTR RFLSQIQSAK 251 I*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 453>:
TABLE-US-00642 m122-1.seq 1 ATGATTAAAA TCCGCAATAT CCATAAGACC
TTTGGCGAAA ACACTATTTT 51 GCGCGGCATC GATTTGGATG TGTGCAAAGG
GCAGGTGGTC GTCATCCTCG 101 GGCCTTCCGG CTCAGGCAAA ACGACGTTTC
TGCGATGCCT AAACGCGTTG 151 GAAATGCCCG AAGACGGACA AATCGAGTTC
GACAACGAGC GACCGCTGAA 201 AATCGATTTT TCTAAAAAAC CAAGCAAACA
CGATATTTTG GCACTGCGCC 251 GCAAATCAGG CATGGTGTTT CAACAATACA
ACCTCTTTCC GCACAAAACC 301 GCCTTGGAAA ACGTAATGGA AGGACCGGTT
GCCGTACAGG GCAAGCCTGC 351 CGCCCAAGCG CGCGAAGAGG CTCTGAAACT
GCTGGAAAAA GTCGGCTTGG 401 GCGACAAAGT GGATTTGTAT CCCTACCAGC
TTTCCGGCGG TCAGCAGCAG 451 CGCGTCGGCA TTGCCCGCGC ATTGGCGATT
CAGCCTGAAC TGATGCTGTT 501 TGACGAACCG ACTTCCGCGC TCGATCCTGA
ATTGGTGCAA GATGTTTTGG 551 ATACCATGAA GGAATTGGCG CAAGAAGGCT
GGACCATGGT TGTCGTTACG 601 CATGAAATCA AGTTCGCCTT AGAAGTGGCA
ACCACCGTCG TCGTGATGGA 651 CGGCGGCGTT ATTGTCGAAC AAGGCAGCCC
GCAAGATTTG TTCGACCACC 701 CCAAACACGA ACGGACGCGG AGATTTTTAA
GCCAAATCCA ATCTACCAAG 751 ATTTGA
This corresponds to the amino acid sequence <SEQ ID 454; ORF
122-1>:
TABLE-US-00643 m122-1.pep 1 MIKIRNIHKT FGENTILRGI DLDVCKGQVV
VILGPSGSGK TTFLRCLNAL 51 EMPEDGQIEF DNERPLKIDF SKKPSKHDIL
ALRRKSGMVF QQYNLFPHKT 101 ALENVMEGPV AVQGKPAAQA REEALKLLEK
VGLGDKVDLY PYQLSGGQQQ 151 RVGIARALAI QPELMLFDEP TSALDPELVQ
DVLDTMKELA QEGWTMVVVT 201 HEIKFALEVA TTVVVMDGGV IVEQGSPQDL
FDHPKHERTR RFLSQIQSTK 251 I* m122-1/g122-1 94.8% identity in 251 aa
overlap 10 20 30 40 50 60 m122-1.pep
MIKIRNIHKTFGENTILRGIDLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| g122-1
MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF 10 20
30 40 50 60 70 80 90 100 110 120 m122-1.pep
DNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA ||
|||:|||||| ||||||||||||||||||||||||||:||||||||||||||||||| g122-1
DNARPLRIDFSKKTSKHDILALRRKSGMVFQQYNLFPHKTVLENVMEGPVAVQGKPAAQA 70 80
90 100 110 120 130 140 150 160 170 180 m122-1.pep
REEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g122-1
REEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ 130
140 150 160 170 180 190 200 210 220 230 240 m122-1.pep
DVLDTMKELAQEGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPQDLFDHPKHERTR
||||:|||||:||||||||||||||:|||||:|||||||||||||||::|||| |||||| g122-1
DVLDAMKELAREGWTMVVVTHEIKFTLEVATNVVVMDGGVIVEQGSPKELFDHLKHERTR 190
200 210 220 230 240 250 m122-1.pep RFLSQIQSTKIX ||||||||:||| g122-1
RFLSQIQSAKIX 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 455>:
TABLE-US-00644 a122-1.seq 1 ATGATTAAAA TCCGCAATAT CCATAAGACC
TTCGGCAAAA ATACCATTTT 51 GCGCGGCATC AATTTGGATG TGTGCAAAGG
GCAGGTGGTC GTCATCCTCG 101 GGCCTTCCGG CTCAGGCAAA ACGACGTTTC
TGCGATGCCT AAACGCGTTG 151 GAAATGCCCG AAGACGGACA AATCGAGTTC
GACAACGAGC GACCGCTGAA 201 AATCGATTTT TCTAAAAAAC CAAGCAAACA
CGATATTTTG GCACTGCGCC 251 GCAAATCAGG CATGGTGTTT CAACAATACA
ACCTCTTTCC GCACAAAACC 301 GCCTTGGAAA ACGTGATGGA AGGACCGGTT
GCCGTACAGG GCAAGCCTGC 351 CGCCCAAGCG CGCGAAGAGG CTCTGAAACT
GCTGGAAAAA GTCGGCTTGG 401 GCGACAAAGT GGATTTGTAT CCCTACCAGC
TTTCCGGCGG TCAGCAGCAG 451 CGCGTCGGCA TTGCCCGAGC ATTGGCGATT
CAGCCCGAGC TGATGTTGTT 501 TGACGAACCC ACTTCCGCGC TTGACCCCGA
GTTGGTGCAA GACGTGTTGA 551 ACGCCATGAA GGAATTGGCG CGGGAAGGTT
GGACGATGGT CGTCGTTACC 601 CACGAAATCA AGTTCGCGCT GGAAGTTGCC
ACGACCGTTG TCGTGATGGA 651 CGGCGGCGTT ATCGTAGAGC AGGGCAGCCC
GAAAGAGTTG TTCGACCACC 701 CCAAACACGA ACGGACGCGG AGATTTTTAA
GCCAAATCCA ATCTACCAAG 751 ATTTGA
This corresponds to the amino acid sequence <SEQ ID 456; ORF
122-1.a>:
TABLE-US-00645 a122-1.pep 1 MIKIRNIHKT FGKNTILRGI NLDVCKGQVV
VILGPSGSGK TTFLRCLNAL 51 EMPEDGQIEF DNERPLKIDF SKKPSKHDIL
ALRRKSGMVF QQYNLFPHKT 101 ALENVMEGPV AVQGKPAAQA REEALKLLEK
VGLGDKVDLY PYQLSGGQQQ 151 RVGIARALAI QPELMLFDEP TSALDPELVQ
DVLNAMKELA REGWTMVVVT 201 HEIKFALEVA TTVVVMDGGV IVEQGSPKEL
FDHPKHERTR RFLSQIQSTK 251 I* a122-1/m122-1 97.2% identity in 251 aa
overlap 10 20 30 40 50 60 a122-1.pep
MIKIRNIHKTFGKNTILRGINLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF
||||||||||||:|||||||:||||||||||||||||||||||||||||||||||||||| m122-1
MIKIRNIHKTFGENTILRGIDLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF 10 20
30 40 50 60 70 80 90 100 110 120 a122-1.pep
DNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m122-1
DNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA 70 80
90 100 110 120 130 140 150 160 170 180 a122-1.pep
REEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m122-1
REEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ 130
140 150 160 170 180 190 200 210 220 230 240 a122-1.pep
DVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFDHPKHERTR
|||::|||||:||||||||||||||||||||||||||||||||||||::||||||||||| m122-1
DVLDTMKELAQEGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPQDLFDHPKHERTR 190
200 210 220 230 240 250 a122-1.pep RFLSQIQSTKIX |||||||||||| m122-1
RFLSQIQSTKIX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 457>:
TABLE-US-00646 g125.seq 1 ATGTCGGGCA ATGCCTCCTC TCCTTCATCT
TCCGCCGCCA TCGGGCTGGT 51 TTGGTTCGGC GCGGCGGTAT CGATTGCCGA
AATCAGCACG GGTACGCTGC 101 TCGCCCCCTT GGGCTGGCAG CGCGGTCTGG
CGGCCCTGCT TTTGGGTCAT 151 GCCGTCGGCG GCGCGCTGTT TTTTGCGGCG
GCGTATATCG GCGCACTGAC 201 CGGACGCAGC TCGATGGAAA GTGTGCGCCT
GTCGTTCGGC AAATGCGGTT 251 CAGTGCTGTT TTCCGTGGCG AATATGCTGC
AACTGGCCGG CTGGACGGCG 301 GTGATGATTT ACGTCGGCGC AacggTCAGC
TCCGCTTTGG GCAAAGTGTT 351 GTGGGACggc gaATCCTTTG TCTGGTGGGC
ATTGGCAAAC GGCGCACTGA 401 TCGTGCTGTG GCTGGTTTTC GGCGCACGCA
GAACGGGCGG GCTGAAAACC 451 GTTTCGATGC TGCTGATGCT GCTTGCCGTG
TTGTGGTTGA GCGTCGAAGT 501 GTTCGCTTCG TCCGGCACAA ACGCCGCGCC
CGCCGTTTCA GACGGCATGA 551 CCTTCGGAAC GGCAGTCGAA CTGTCCGCCG
TCATGCCGCT TTCCTGGCTG 601 CCGCTGGCCG CCGACTACAC GCGCCAAGCA
CGCCGCCCGT TTGCGGCAAC 651 CCTGACGGCA ACGCTCGCCT ATACGCTGAC
GGGCTGCTGG ATGTATGCCT 701 TGGGTTTGGC GGCGGCTCTG TTTACCGGAG
AAACCGACGT GGCGAAAATC 751 CTGTTGGGCG CGGGCTTGGG CATAACGGGC
ATTCTGGCAG TCGTCCTCTC 801 CACCGTTACC ACAACGTTTC TCGATACCTA
TTCCGCCGGC GCGAGTGCGA 851 ACAACATTTC CGCGCGTTTT GCGGAAATAC
CCGTCGCTGT CGGCGTTACC 901 CTGatccgca ccgtgcttgc cgtcatgctg
cccgttaccg aatataaaaa 951 cttcctgctg cttatccgct cggtatttgg
gccgatggcg ggtggttttg 1001 attgccgaCT TTTttgtctt AAAACGGCGT GA
This corresponds to the amino acid sequence <SEQ ID 458; ORF
125.ng>: The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 459>:
TABLE-US-00647 m125.seq 1 ATGTCGGGCA ATGCCTCCTC TCCTTCATCT
TCCTCCGCCA TCGGGCTGAT 51 TTGGTTCGGC GCGGCGGTAT CGATTGCCGA
AATCAGCACG GGTACGCTGC 101 TTGCGCCTTT GGGCTGGCAG CGCGGTCTGG
CGGCTCTACT TTTGGGTCAT 151 GCCGTCGGCG GCGCGCTGTT TTTTGCGGCG
GCGTATATCG GCGCACTGAC 201 CGGACGCAGC TCGATGGAAA GCGTGCGCCT
GTCGTTCGGC AAACGCGGTT 251 CAGTGCTGTT TTCCGTGGCG AATATGCTGC
AACTGGCCGG CTGGACGGCG 301 GTGATGATTT ACGCCGGCGC AACGGTCAGC
TCCGCTTTGG GCAAAGTGTT 351 GTGGGACGGC GAATCTTTTG TCTGGTGGGC
ATTGGCAAAC GGCGCGCTGA 401 TTGTGCTGTG GCTGGTTTTC GGCGCACGCA
AAACAGGCGG GCTGAAAACC 451 GTTTCGATGC TGCTGATGCT GTTGGCGGTT
CTGTGGCTGA GTGCCGAAGT 501 CTTTTCCACG GCAGGCAGCA CCGCCGCACA
GGTTTCAGAC GGCATGAGTT 551 TCGGAACGGC AGTCGAGCTG TCCGCCGTGA
TGCCGCTTTC CTGGCTGCCG 601 CTTGCCGCCG ACTACACGCG CCACGCGCGC
CGCCCGTTTG CGGCAACCCT 651 GACGGCAACG CTCGCCTACA CGCTGACCGG
CTGCTGGATG TATGCCTTGG 701 GTTTGGCAGC GGCGTTGTTC ACCGGAGAAA
CCGACGTGGC AAAAATCCTG 751 CTGGGCGCAr GTTTGgGTGC GGCAGGCATT
TTGGCGGTCG TCCTCTCCAC 801 CGTTACCACA ACGTTTCTCG ATGCCTATTC
CGCCGGCGCG AGTGCGAACA 851 ACATTTCCGC GCGTTTTGCG GAAACACCCG
TCGCTGTCrG CGTTACCCTG 901 ATCGGCACGG TACTTGCCGT CATGCTGCCC
GTTACCGAAT ATGAAAACTT 951 CCTGCTGCTT ATCGGCTCGG TATTTGCGCC
GATGGCGGgC GGTTTTGATT 1001 GCCGACTTTT TCGTCTTGAA ACGGCGTGA
This corresponds to the amino acid sequence <SEQ ID 460; ORF
125>:
TABLE-US-00648 m125.pep 1 MSGNASSPSS SSAIGLIWFG AAVSIAEIST
GTLLAPLGWQ RGLAALLLGH 51 AVGGALFFAA AYIGALTGRS SMESVRLSFG
KRGSVLFSVA NMLQLAGWTA 101 VMIYAGATVS SALGKVLWDG ESFVWWALAN
GALIVLWLVF GARKTGGLKT 151 VSMLLMLLAV LWLSAEVFST AGSTAAQVSD
GMSFGTAVEL SAVMPLSWLP 201 LAADYTRHAR RPFAATLTAT LAYTLTGCWM
YALGLAAALF TGETDVAKIL 251 LGAXLGAAGI LAVVLSTVTT TFLDAYSAGA
SANNISARFA ETPVAVXVTL 301 IGTVLAVMLP VTEYENFLLL IGSVFAPMAG
GFDCRLFRLE TA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 125
shows 92.1% identity over a 343 aa overlap with a predicted ORF
(ORF 125.ng) from N. gonorrhoeae:
TABLE-US-00649 m125/g125 10 20 30 40 50 60 m125.pep
MSGNASSPSSSSAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLAALLLGHAVGGALFFAA
|||||||||||:||||:||||||||||||||||||||||||||||||||||||||||||| g125
MSGNASSPSSSAAIGLVWFGAAVSIAEISTGTLLAPLGWQRGLAALLLGHAVGGALFFAA 10 20
30 40 50 60 70 80 90 100 110 120 m125.pep
AYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVMIYAGATVSSALGKVLWDG
||||||||||||||||||||| ||||||||||||||||||||||:||||||||||||||| g125
AYIGALTGRSSMESVRLSFGKCGSVLFSVANMLQLAGWTAVMIYVGATVSSALGKVLWDG 70 80
90 100 110 120 130 140 150 160 170 179 m125.pep
ESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAVLWLSAEVFSTAGSTAAQ-VS
|||||||||||||||||||||||:||||||||||||||||||||:|||:::|::|| || g125
ESFVWWALANGALIVLWLVFGARRTGGLKTVSMLLMLLAVLWLSVEVFASSGTNAAPAVS 130
140 150 160 170 180 180 190 200 210 220 230 239 m125.pep
DGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLTATLAYTLTGCWMYALGLAAAL
|||:||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g125
DGMTFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLTATLAYTLTGCWMYALGLAAAL 190
200 210 220 230 240 240 250 260 270 280 290 299 m125.pep
FTGETDVAKILLGAXLGAAGILAVVLSTVTTTFLDAYSAGASANNISARFAETPVAVXVT
|||||||||||||| || :||||||||||||||||:|||||||||||||||| |||| || g125
FTGETDVAKILLGAGLGITGILAVVLSTVTTTFLDTYSAGASANNISARFAEIPVAVGVT 250
260 270 280 290 300 300 310 320 330 340 m125.pep
LIGTVLAVMLPVTEYENFLLLIGSVFAPMAGGFDCRLFRLETAX || ||||||||||||:||||||
|||:||||||||||| |:||| g125
LIRTVLAVMLPVTEYKNFLLLIRSVFGPMAGGFDCRLFCLKTAX 310 320 330 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 461>:
TABLE-US-00650 a125.seq 1 ATGTCGGGCA ATGCCTCCTC TCCTTCATCT
TCCGCCGCCA TCGGGCTGAT 51 TTGGTTCGGC GCGGCGGTAT CGATTGCCGA
AATCAGCACG GGTACACTGC 101 TTGCGCCTTT GGGCTGGCAG CGCGGTCTGG
CGGCTCTGCT TTTGGGTCAT 151 GCCGTCGGCG GCGCGCTGTT TTTTGCGGCG
GCGTATATCG GCGCACTGAC 201 CGGACGCAGC TCGATGGAAA GCGTGCGCCT
GTCGTTCGGC AAACGCGGTT 251 CAGTGCTGTT TTCCGTGGCG AATATGCTGC
AACTGGCCGG CTGGACGGCG 301 GTGATGATTT ACGCCGGCGC AACGGTCAGC
TCCGCTTTGG GCAAAGTGTT 351 GTGGGACGGC GAATCTTTTG TCTGGTGGGC
ATTGGCAAAC GGCGCGCTGA 401 TTGTGCTGTG GCTGGTTTTC GGCGCACGCA
AAACAGGCGG GCTGAAAACC 451 GTTTCGATGC TGCTGATGCT GTTGGCGGTT
CTGTGGCTGA GTGCCGAAGT 501 CTTTTCCACG GCAGGCAGCA CCGCCGCACA
GGTTTCAGAC GGCATGAGTT 551 TCGGAACGGC AGTCGAGCTG TCCGCCGTGA
TGCCGCTTTC TTGGCTGCCG 601 CTGGCCGCCG ACTACACGCG CCACGCGCGC
CGCCCGTTTG CGGCAACCCT 651 GACGGCAACG CTCGCCTACA CGCTGACCGG
CTGCTGGATG TATGCCTTGG 701 GTTTGGCAGC GGCGTTGTTC ACCGGAGAAA
CCGACGTGGC AAAAATCCTG 751 CTGGGCGCAG GTTTGGGTGC GGCAGGCATT
TTGGCGGTCG TCCTGTCGAC 801 CGTTACCACC ACTTTTCTCG ATGCCTACTC
CGCCGGCGTA AGTGCCAACA 851 ATATTTCCGC CAAACTTTCG GAAATACCCA
TCGCCGTTGC CGTCGCCGTT 901 GTCGGCACAC TGCTTGCCGT CCTCCTGCCC
GTTACCGAAT ATGAAAACTT 951 CCTGCTGCTT ATCGGCTCGG TATTTGCGCC
GATGGCG.GC GGTTTTGATT 1001 GCCGACTTTT TCGTCTTGAA ACGGCGTGA
This corresponds to the amino acid sequence <SEQ ID 462; ORF
125.a>:
TABLE-US-00651 a125.pep 1 MSGNASSPSS SAAIGLIWFG AAVSIAEIST
GTLLAPLGWQ RGLAALLLGH 51 AVGGALFFAA AYIGALTGRS SMESVRLSFG
KRGSVLFSVA NMLQLAGWTA 101 VMIYAGATVS SALGKVLWDG ESFVWWALAN
GALIVLWLVF GARKTGGLKT 151 VSMLLMLLAV LWLSAEVFST AGSTAAQVSD
GMSFGTAVEL SAVMPLSWLP 201 LAADYTRHAR RPFAATLTAT LAYTLTGCWM
YALGLAAALF TGETDVAKIL 251 LGAGLGAAGI LAVVLSTVTT TFLDAYSAGV
SANNISAKLS EIPIAVAVAV 301 VGTLLAVLLP VTEYENFLLL IGSVFAPMAX
GFDCRLFRLE TA* m125/a125 95.6% identity in 342 aa overlap 10 20 30
40 50 60 m125.pep
MSGNASSPSSSSAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLAALLLGHAVGGALFFAA
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| a125
MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLAALLLGHAVGGALFFAA 10 20
30 40 50 60 70 80 90 100 110 120 m125.pep
AYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVMIYAGATVSSALGKVLWDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a125
AYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVMIYAGATVSSALGKVLWDG 70 80
90 100 110 120 130 140 150 160 170 180 m125.pep
ESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAVLWLSAEVFSTAGSTAAQVSD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a125
ESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAVLWLSAEVFSTAGSTAAQVSD 130
140 150 160 170 180 190 200 210 220 230 240 m125.pep
GMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLTATLAYTLTGCWMYALGLAAALF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a125
GMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLTATLAYTLTGCWMYALGLAAALF 190
200 210 220 230 240 250 260 270 280 290 300 m125.pep
TGETDVAKILLGAXLGAAGILAVVLSTVTTTFLDAYSAGASANNISARFAETPVAVXVTL
||||||||||||| |||||||||||||||||||||||||:|||||||:::| |:|| |:: a125
TGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAYSAGVSANNISAKLSEIPIAVAVAV 250
260 270 280 290 300 310 320 330 340 m125.pep
IGTVLAVMLPVTEYENFLLLIGSVFAPMAGGFDCRLFRLETAX
:||:|||:||||||||||||||||||||| ||||||||||||| a125
VGTLLAVLLPVTEYENFLLLIGSVFAPMAXGFDCRLFRLETAX 310 320 330 340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 463>:
TABLE-US-00652 g126.seq 1 AtgccgtcTG AAaccCcaaa ggcACGCCGC
CGGCTTTCAG ACGGCATCGC 51 GTCCGACAAC CATACCAAAG AATCCATCAT
GCTCACCctg tacggcGAAA 101 CTTTCCCTTC GCGGCTGCTg ctcggcacgG
cggcctacCC GACCCCTGAA 151 ATCCTCAAAC AATCCGTCCG AACCGCCCGG
CCCGCGATGA ttaccGTCTC 201 GCTGCGCCGC ACGGGATGCG GCGGCGAGGC
GCACGGTCAG GGGTTTTGGT 251 CGCTGCTTCA AGAAACCGGC GTTCCCGTCC
TGCCGAACAC GGCAGGCTGC 301 CAAAGCGTGC AGGAAGCGGT AACGACGGCG
CAAATGGCGC GCGAAGTGTT 351 TGAAACCGAT TGGATAAAAT TGGAACTCAT
CGGCGACGAC GACACCTTGC 401 AGCCGGACGT GTTCCAACTC GTCGAAGCGG
CGGAAATCCT GATTAAAGAC 451 GGCTTCAAAG TGCTGCCTTA TTGCACCGAA
GACCTGATTG CCTGCCGCCG 501 CCTGCTCGAT GCGGGCTGTC AGGCGTTGAT
GCCGTGGGCG GCTCCCATCG 551 GCACGGGTTT GGGGGCGGTT CACGCCTATG
CGCTCAAAAT CCTGCGCGAA 601 CGCCTGCCCG ACACGCCGCT GATTATCGAC
GCGGGCTTGG GTTTGCCTTC 651 CCAAGCGGCA CAAGTGATGG AATGGGGTTT
TGACGGCGTA TTGTTAAACA 701 CCGCCGTTTC CCGCAGCGGC GACCCCGTCA
ACATGGCGCG CGCCTTCGCA 751 CTCGCCGTCG AATCCGGACG GCTGGCATTT
GAAGCCGGGC CGGTCGAAGC 801 GCGAACCAAA GCCCAAGCCA GCACGCCGAC
AGTCGGACAA CCGTTTTGGC 851 ATTCGGCGGA ATATTGA
This corresponds to the amino acid sequence <SEQ ID 464; ORF
126.ng>:
TABLE-US-00653 g126.pep 1 MPSETPKARR RLSDGIASDN HTKESIMLTL
YGETFPSRLL LGTAAYPTPE 51 ILKQSVRTAR PAMITVSLRR TGCGGEAHGQ
GFWSLLQETG VPVLPNTAGC 101 QSVQEAVTTA QMAREVFETD WIKLELIGDD
DTLQPDVFQL VEAAEILIKD 151 GFKVLPYCTE DLIACRRLLD AGCQALMPWA
APIGTGLGAV HAYALKILRE 201 RLPDTPLIID AGLGLPSQAA QVMEWGFDGV
LLNTAVSRSG DPVNMARAFA 251 LAVESGRLAF EAGPVEARTK AQASTPTVGQ
PFWHSAEY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 465>:
TABLE-US-00654 m126.seq (partial) 1 ..CACTATACAA AGGAACCCAT
TATGCTCACC CTATACGGCG AAACTTTCCC 51 CTCGCGGCTG CTGCTCGGCA
CGGCTGCCTA CCCGACCCCC GAAATCCTCA 101 AACAATCCAT CCAAACCGCC
CAGCCTGCGA TGATTACCGT CTCGCTGCGC 151 CGCGCGGGAA GCGGCGGCGA
GGCGCACGGT CAGGGGTTTT GGTCGCTGCT 201 TCAAGAAACC GGCGTTCCCG
TCCTGCCGAA CACGGCAGGC TGCCAAAGCG 251 TGCAGGAAGC GGTAACGACG
GCGCAAATGG CGCGCGAAGT GTTTGAAACC 301 GATTGGATAA AATTGGAACT
CATCGGAGAT GACGACACCT TGCAGCCGGA 351 TGTGTTCCAG CTTGTCGAAG
CGGCGGAAAT CCTGATTAAA GACGGCTTCA 401 AAGTGCTGCC TTATTGCACC
GAAGACCTGA TTGCCTGCCG CCGCCTGCTC 451 GACGCGGGCT GTCAGGCGTT
GATGCCGTGG GCGGCCCCGA TCGGCACGGG 501 TTTGGGCGCG GTTCACGCCT
ACGCGTTGAA CGTCCTGCGC GAACGCCTGC 551 CCGACACGCC GCTGATTATC
GACGCGGGCT TGGGTTTGCC CTCACAGGCG 601 GCACAAGTGA TGGAATGGGG
CTTTGACGGC GTGCTTTTGA ATACTGCCGT 651 TTCCCGCAGC GGCGATCCGG
TCAATATGGC ACGCGCCTTC GCACTCGCCG 701 TCGAATCCGG ACGGCTGGCA
TTTGAAGCCG GACCGGTCGA AGCACGCGAC 751 AAAGCGCAAG CCAGCACGCC
GACAGTCGGA CAACCGTTTT GGCATTCGGC 801 GGAATATTGA
This corresponds to the amino acid sequence <SEQ ID 466; ORF
126>:
TABLE-US-00655 m126.pep (partial) 1 ..HYTKEPIMLT LYGETFPSRL
LLGTAAYPTP EILKQSIQTA QPAMITVSLR 51 RAGSGGEAHG QGFWSLLQET
GVPVLPNTAG CQSVQEAVTT AQMAREVFET 101 DWIKLELIGD DDTLQPDVFQ
LVEAAEILIK DGFKVLPYCT EDLIACRRLL 151 DAGCQALMPW AAPIGTGLGA
VHAYALNVLR ERLPDTPLII DAGLGLPSQA 201 AQVMEWGFDG VLLNTAVSRS
GDPVNMARAF ALAVESGRLA FEAGPVEARD 251 KAQASTPTVG QPFWHSAEY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 126
shows 95.9% identity over a 269 aa overlap with a predicted ORF
(ORF 126.ng) from N. gonorrhoeae:
TABLE-US-00656 m126/g126 10 20 30 40 m126.pep
HYTKEPIMLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQ ::|||
||||||||||||||||||||||||||||||::||: g126
MPSETPKARRRLSDGIASDNHTKESIMLTLYGETFPSRLLLGTAAYPTPEILKQSVRTAR 10 20
30 40 50 60 50 60 70 80 90 100 m126.pep
PAMITVSLRRAGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETD
||||||||||:| ||||||||||||||||||||||||||||||||||||||||||||||| g126
PAMITVSLRRTGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETD 70 80
90 100 110 120 110 120 130 140 150 160 m126.pep
WIKLELIGDDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g126
WIKLELIGDDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWA 130
140 150 160 170 180 170 180 190 200 210 220 m126.pep
APIGTGLGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSG
|||||||||||||||::||||||||||||||||||||||||||||||||||||||||||| g126
APIGTGLGAVHAYALKILRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSG 190
200 210 220 230 240 230 240 250 260 270 m126.pep
DPVNMARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEYX
|||||||||||||||||||||||||||| |||||||||||||||||||| g126
DPVNMARAFALAVESGRLAFEAGPVEARTKAQASTPTVGQPFWHSAEYX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 467>:
TABLE-US-00657 a126.seq 1 TTGTTAATCC ACTATACAAA GGAACCCATT
ATGCTCACCC TGTACAGCGA 51 AACTTTCCCT TCGCGGCTGC TGCTCGGCAC
AGCCGCCTAC CCGACCCCTG 101 AAATCCTCAA ACAATCCGTC CGAACCGCCC
GGCCCGCGAT GATTACCGTC 151 TCGCTGCGCC GCGCGGGATG CGGCGGCGAG
GCGCACGGTC AGGGGTTTTG 201 GTCGCTGCTT CAAGAAACCG GCGTTCCCGT
CCTGCCGAAC ACGGCAGGCT 251 GCCAAAGCGT GCAGGAAGCG GTAACGACGG
CGCAAATGGC GCGCGAAGTG 301 TTTGAAACCG ATTGGATTAA ACTCGAACTC
ATCGGCGACG ACGACACCTT 351 GCAGCCGGAT GTGTTCCAAC TTGTCGAAGC
GGCGGAAATC CTGATTAAAG 401 ACGGCTTCAA AGTGCTGCCT TATTGCACCG
AAGACCTGAT TGCCTGCCGC 451 CGCCTGCTCG ACGCGGGCTG TCAGGCGTTG
ATGCCGTGGG CGGCCCCGAT 501 CGGCACGGGT TTGGGCGCGG TTCACGCCTA
CGCGTTGAAC GTCCTGCGCG 551 AACGCCTGCC CGACACGCCG CTGATTATCG
ACGCGGGCTT GGGTTTGCCC 601 TCACAGGCGG CACAAGTGAT GGAATGGGGC
TTTGACGGCG TGCTTTTGAA 651 TACTGCCGTT TCCCGCAGCG GCGATCCGGT
CAATATGGCA CGCGCCTTCG 701 CACTCGCCGT CGAATCCGGA CGGCTGGCAT
TTGAAGCCGG ACCGGTCGAA 751 GCACGCGACA AAGCGCAAGC CAGCACGCCG
ACAGTCGGAC AACCGTTTTG 801 GCATTCGGCG GAATATTGA
This corresponds to the amino acid sequence <SEQ ID 468; ORF
126.a>:
TABLE-US-00658 a126.pep 1 LLIHYTKEPI MLTLYSETFP SRLLLGTAAY
PTPEILKQSV RTARPAMITV 51 SLRRAGCGGE AHGQGFWSLL QETGVPVLPN
TAGCQSVQEA VTTAQMAREV 101 FETDWIKLEL IGDDDTLQPD VFQLVEAAEI
LIKDGFKVLP YCTEDLIACR 151 RLLDAGCQAL MPWAAPIGTG LGAVHAYALN
VLRERLPDTP LIIDAGLGLP 201 SQAAQVMEWG FDGVLLNTAV SRSGDPVNMA
RAFALAVESG RLAFEAGPVE 251 ARDKAQASTP TVGQPFWHSA EY* m126/a126 98.1%
identity in 269 aa overlap 10 20 30 40 50 m126.pep
HYTKEPIMLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRRAGSGGE
||||||||||||:|||||||||||||||||||||||::||:|||||||||||| ||| a126
LLIHYTKEPIMLTLYSETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRRAGCGGE 10 20
30 40 50 60 60 70 80 90 100 110 m126.pep
AHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIGDDDTLQPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a126
AHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIGDDDTLQPD 70 80
90 100 110 120 120 130 140 150 160 170 m126.pep
VFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a126
VFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALN 130
140 150 160 170 180 180 190 200 210 220 230 m126.pep
VLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a126
VLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESG 190
200 210 220 230 240 240 250 260 270 m126.pep
RLAFEAGPVEARDKAQASTPTVGQPFWHSAEYX |||||||||||||||||||||||||||||||||
al26 RLAFEAGPVEARDKAQASTPTVGQPFWHSAEYX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 469>:
TABLE-US-00659 g126-1.seq 1 ATGCTCACCC TGTACGGCGA AACTTTCCCT
TCGCGGCTGC TGCTCGGCAC 51 GGCCGCCTAC CCGACCCCTG AAATCCTCAA
ACAATCCGTC CGAACCGCCC 101 GGCCCGCGAT GATTACCGTC TCGCTGCGCC
GCACGGGATG CGGCGGCGAG 151 GCGCACGGTC AGGGGTTTTG GTCGCTGCTT
CAAGAAACCG GCGTTCCCGT 201 CCTGCCGAAC ACGGCAGGCT GCCAAAGCGT
GCAGGAAGCG GTAACGACGG 251 CGCAAATGGC GCGCGAAGTG TTTGAAACCG
ATTGGATAAA ATTGGAACTC 301 ATCGGCGACG ACGACACCTT GCAGCCGGAC
GTGTTCCAAC TCGTCGAAGC 351 GGCGGAAATC CTGATTAAAG ACGGCTTCAA
AGTGCTGCCT TATTGCACCG 401 AAGACCTGAT TGCCTGCCGC CGCCTGCTCG
ATGCGGGCTG TCAGGCGTTG 451 ATGCCGTGGG CGGCTCCCAT CGGCACGGGT
TTGGGGGCGG TTCACGCCTA 501 TGCGCTCAAA ATCCTGCGCG AACGCCTGCC
CGACACGCCG CTGATTATCG 551 ACGCGGGCTT GGGTTTGCCT TCCCAAGCGG
CACAAGTGAT GGAATGGGGT 601 TTTGACGGCG TATTGTTAAA CACCGCCGTT
TCCCGCAGCG GCGACCCCGT 651 CAACATGGCG CGCGCCTTCG CACTCGCCGT
CGAATCCGGA CGGCTGGCAT 701 TTGAAGCCGG GCCGGTCGAA GCGCGAACCA
AAGCCCAAGC CAGCACGCCG 751 ACAGTCGGAC AACCGTTTTG GCATTCGGCG
GAATATTGA
This corresponds to the amino acid sequence <SEQ ID 470; ORF
126-1.ng>:
TABLE-US-00660 g126-1.pep 1 MLTLYGETFP SRLLLGTAAY PTPEILKQSV
RTARPAMITV SLRRTGCGGE 51 AHGQGFWSLL QETGVPVLPN TAGCQSVQEA
VTTAQMAREV FETDWIKLEL 101 IGDDDTLQPD VFQLVEAAEI LIKDGFKVLP
YCTEDLIACR RLLDAGCQAL 151 MPWAAPIGTG LGAVHAYALK ILRERLPDTP
LIIDAGLGLP SQAAQVMEWG 201 FDGVLLNTAV SRSGDPVNMA RAFALAVESG
RLAFEAGPVE ARTKAQASTP 251 TVGQPFWHSA EY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 471>:
TABLE-US-00661 m126-1.seq 1 ATGCTCACCC TATACGGCGA AACTTTCCCC
TCGCGGCTGC TGCTCGGCAC 51 GGCTGCCTAC CCGACCCCCG AAATCCTCAA
ACAATCCATC CAAACCGCCC 101 AGCCTGCGAT GATTACCGTC TCGCTGCGCC
GCGCGGGAAG CGGCGGCGAG 151 GCGCACGGTC AGGGGTTTTG GTCGCTGCTT
CAAGAAACCG GCGTTCCCGT 201 CCTGCCGAAC ACGGCAGGCT GCCAAAGCGT
GCAGGAAGCG GTAACGACGG 251 CGCAAATGGC GCGCGAAGTG TTTGAAACCG
ATTGGATAAA ATTGGAACTC 301 ATCGGAGATG ACGACACCTT GCAGCCGGAT
GTGTTCCAGC TTGTCGAAGC 351 GGCGGAAATC CTGATTAAAG ACGGCTTCAA
AGTGCTGCCT TATTGCACCG 401 AAGACCTGAT TGCCTGCCGC CGCCTGCTCG
ACGCGGGCTG TCAGGCGTTG 451 ATGCCGTGGG CGGCCCCGAT CGGCACGGGT
TTGGGCGCGG TTCACGCCTA 501 CGCGTTGAAC GTCCTGCGCG AACGCCTGCC
CGACACGCCG CTGATTATCG 551 ACGCGGGCTT GGGTTTGCCC TCACAGGCGG
CACAAGTGAT GGAATGGGGC 601 TTTGACGGCG TGCTTTTGAA TACTGCCGTT
TCCCGCAGCG GCGATCCGGT 651 CAATATGGCA CGCGCCTTCG CACTCGCCGT
CGAATCCGGA CGGCTGGCAT 701 TTGAAGCCGG ACCGGTCGAA GCACGCGACA
AAGCGCAAGC CAGCACGCCG 751 ACAGTCGGAC AACCGTTTTG GCATTCGGCG
GAATATTGA
This corresponds to the amino acid sequence <SEQ ID 5; ORF
126-1>:
TABLE-US-00662 m126-1.pep 1 MLTLYGETFP SRLLLGTAAY PTPEILKQSI
QTAQPAMITV SLRRAGSGGE 51 AHGQGFWSLL QETGVPVLPN TAGCQSVQEA
VTTAQMAREV FETDWIKLEL 101 IGDDDTLQPD VFQLVEAAEI LIKDGFKVLP
YCTEDLIACR RLLDAGCQAL 151 MPWAAPIGTG LGAVHAYALN VLRERLPDTP
LIIDAGLGLP SQAAQVMEWG 201 FDGVLLNTAV SRSGDPVNMA RAFALAVESG
RLAFEAGPVE ARDKAQASTP 251 TVGQPFWHSA EY* m126-1/g126-1 96.9%
identity in 262 aa overlap 10 20 30 40 50 60 m126-1.pep
MLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRRAGSGGEAHGQGFWSLL
|||||||||||||||||||||||||||||::||:||||||||||:| ||||||||||||| g126-1
MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRRTGCGGEAHGQGFWSLL 10 20
30 40 50 60 70 80 90 100 110 120 m126-1.pep
QETGVPVLPNTAGCQSVQEAVTTAQMAREVFELDWIKLELIGDDDTLQPDVFQLVEAAEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g126-1
QETGVPVLPNTAGCQSVQEAVTTAQMAREVFELDWIKLELIGDDDTLQPDVFQLVEAAEI 70 80
90 100 110 120 130 140 150 160 170 180 m126-1.pep
LIKDGFKVLPYCLEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALNVLRERLPDTP
|||||||||||||||||||||||||||||||||||||||||||||||||::||||||||| g126-1
LIKDGFKVLPYCLEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALKILRERLPDTP 130
140 150 160 170 180 190 200 210 220 230 240 m126-1.pep
LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAGPVE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g126-1
LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAGPVE 190
200 210 220 230 240 250 260 m126-1.pep ARDKAQASTPTVGQPFWHSAEYX ||
|||||||||||||||||||| g126-1 ARTKAQASTPTVGQPFWHSAEYX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 473>:
TABLE-US-00663 a126-1.seq 1 ATGCTCACCC TGTACAGCGA AACTTTCCCT
TCGCGGCTGC TGCTCGGCAC 51 AGCCGCCTAC CCGACCCCTG AAATCCTCAA
ACAATCCGTC CGAACCGCCC 101 GGCCCGCGAT GATTACCGTC TCGCTGCGCC
GCGCGGGATG CGGCGGCGAG 151 GCGCACGGTC AGGGGTTTTG GTCGCTGCTT
CAAGAAACCG GCGTTCCCGT 201 CCTGCCGAAC ACGGCAGGCT GCCAAAGCGT
GCAGGAAGCG GTAACGACGG 251 CGCAAATGGC GCGCGAAGTG TTTGAAACCG
ATTGGATTAA ACTCGAACTC 301 ATCGGCGACG ACGACACCTT GCAGCCGGAT
GTGTTCCAAC TTGTCGAAGC 351 GGCGGAAATC CTGATTAAAG ACGGCTTCAA
AGTGCTGCCT TATTGCACCG 401 AAGACCTGAT TGCCTGCCGC CGCCTGCTCG
ACGCGGGCTG TCAGGCGTTG 451 ATGCCGTGGG CGGCCCCGAT CGGCACGGGT
TTGGGCGCGG TTCACGCCTA 501 CGCGTTGAAC GTCCTGCGCG AACGCCTGCC
CGACACGCCG CTGATTATCG 551 ACGCGGGCTT GGGTTTGCCC TCACAGGCGG
CACAAGTGAT GGAATGGGGC 601 TTTGACGGCG TGCTTTTGAA TACTGCCGTT
TCCCGCAGCG GCGATCCGGT 651 CAATATGGCA CGCGCCTTCG CACTCGCCGT
CGAATCCGGA CGGCTGGCAT 701 TTGAAGCCGG ACCGGTCGAA GCACGCGACA
AAGCGCAAGC CAGCACGCCG 751 ACAGTCGGAC AACCGTTTTG GCATTCGGCG
GAATATTGA
This corresponds to the amino acid sequence <SEQ ID 474; ORF
126-1.a>:
TABLE-US-00664 a126-1.pep 1 MLTLYSETFP SRLLLGTAAY PTPEILKQSV
RTARPAMITV SLRRAGCGGE 51 AHGQGFWSLL QETGVPVLPN TAGCQSVQEA
VTTAQMAREV FETDWIKLEL 101 IGDDDTLQPD VFQLVEAAEI LIKDGFKVLP
YCTEDLIACR RLLDAGCQAL 151 MPWAAPIGTG LGAVHAYALN VLRERLPDTP
LIIDAGLGLP SQAAQVMEWG 201 FDGVLLNTAV SRSGDPVNMA RAFALAVESG
RLAFEAGPVE ARDKAQASTP 251 TVGQPFWHSA EY* a126-1/m126-1 98.1%
identity in 262 aa overlap 10 20 30 40 50 60 a126-1.pep
MLTLYSETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRRAGCGGEAHGQGFWSLL
|||||:|||||||||||||||||||||||::||:|||||||||||| ||||||||||||| m126-1
MLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRRAGSGGEAHGQGFWSLL 10 20
30 40 50 60 70 80 90 100 110 120 a126-1.pep
QETGVPVLPNTAGCQSVQEAVTTAQMAREVFELDWIKLELIGDDDTLQPDVFQLVEAAEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m126-1
QETGVPVLPNTAGCQSVQEAVTTAQMAREVFELDWIKLELIGDDDTLQPDVFQLVEAAEI 70 80
90 100 110 120 130 140 150 160 170 180 a126-1.pep
LIKDGFKVLPYCLEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALNVLRERLPDTP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m126-1
LIKDGFKVLPYCLEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALNVLRERLPDTP 130
140 150 160 170 180 190 200 210 220 230 240 a126-1.pep
LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAGPVE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m126-1
LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAGPVE 190
200 210 220 230 240 250 260 a126-1.pep ARDKAQASTPTVGQPFWHSAEYX
||||||||||||||||||||||| m126-1 ARDKAQASTPTVGQPFWHSAEYX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 475>:
TABLE-US-00665 g127.seq 1 ATGGAAATAT GGAATATGTT GAACACTTGG
CCCGATGCCG TCCCGATACG 51 CGCGGAGGCG GCCGAATCCG TGGCGGCGGT
CGCGGCTTTG CTGCTGGCGC 101 GCGCCCTTCT GTTGAATATC CACTTCAGAC
GGCATCCGGA TTTCGGCATC 151 GAAAGCAAGC GGCGGTTTTT GGTTGCCAGC
CGCAATATAA CGCTGCTTTT 201 GGTGCTGTTT TCGCTGGCAT TTATCTGGTC
GGCGCAAATT CAAACGCTGG 251 CTTTGTCGAT GTTTGCGGTG GCGGCGGCGG
TCGTCGTGGC GACAAAAGAA 301 CTGATTATGT GTCTGTCGGG CAGTATTTTA
aggtctGCCA CCCAGCAATA 351 CTCGGTCGGC GACTATATCG AAATCAACGG
CCTGCGCGGG CGCGTGGTCG 401 ACATCAATCT GTTGAACACG CTGATGATGC
AGGTCGGTCC GAACCCCTTG 451 GTCGGACAGC TTGCGGGAAC CACCGTTTCT
TTCCCCAACA GCCTGTTGTT 501 GAGCCACCCC GTGCGCCGCG ACAATATTTT
GGGCGACTAT GTCATCCATA 551 CGGTCGAAAT CCCCGTTCCC ATCCATTTGG
ATTCGGATGA AGCCGTATGC 601 CGTCTGAAAG CCGTACTCGA GCCCTTGTGC
GCGCCCTACA TCCCCGCCAT 651 TCAGCGGTAT TTGGAAAACG TGCAGGCGGA
AAAACTGTTT ATCACGCCCG 701 CCGCCAGGCC GCGCGTTACC CGCGTACCGT
ACGACGACAA GGCATACCGC 751 ATCATCGTCC GCTTCGCCTC CCCCGTTTCA
AAGCGGCTGG AAATCCAACA 801 GGCGGTTATG GACGAATTTT TGCGCGTACA
ATACCGCCTG TTAAATCATC 851 CCGCCGgctc cgAAACACTT TAA
This corresponds to the amino acid sequence <SEQ ID 476; ORF
127.ng>:
TABLE-US-00666 g127.pep 1 MEIWNMLNTW PDAVPIRAEA AESVAAVAAL
LLARALLLNI HFRRHPDFGI 51 ESKRRFLVAS RNITLLLVLF SLAFIWSAQI
QTLALSMFAV AAAVVVATKE 101 LIMCLSGSIL RSATQQYSVG DYIEINGLRG
RVVDINLLNT LMMQVGPNPL 151 VGQLAGTTVS FPNSLLLSHP VRRDNILGDY
VIHTVEIPVP IHLDSDEAVC 201 RLKAVLEPLC APYIPAIQRY LENVQAEKLF
ITPAARPRVT RVPYDDKAYR 251 IIVRFASPVS KRLEIQQAVM DEFLRVQYRL
LNHPAGSETL *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 477>:
TABLE-US-00667 m127.seq 1 ATGGAAATAT GGAATATGTT GGACACTTGG
CTCGGTGCCG TCCCGATACG 51 TGCGGAGGCG GTCGAATCCG TGGCGGCGGT
TGCGGCTTTG CTGCTGGCGC 101 GCGCCCTTCT GTTGAATATC CACTTCAAAC
GGCATCCGGA TTTCGGCATC 151 GAAAGCAAGC GGCGGTTTTT GGTTGCCAGC
CGCAATATAA CGCTGCTTTT 201 GGTGCTGTTT TCGCTGGCAT TTATCTGGTC
GGCGCAAATC CAAACGCTGG 251 CTTTGTCGAT GTTTGCGGTG GCGGCGGCGG
TCGTCGTGGC GACGAAGGAA 301 CTGATTATGT GTCTGTCGGG CAGTATTTTA
AGGTCTGCCA CCCAGCAATA 351 CTCGGTCGGC GACTATATCG AAATCAACGG
CCTGCGCGGG CGCGTGGTCG 401 ACATCAACCT GTTGAACACG CTGATGATGC
AGGTCGGTCC GAACCCCTTG 451 GTCGGACAGC TTGCGGGAAC CACCGTTTCT
TTCCCCAACA GCCTGTTGTT 501 GAGCCACCCC GTGCGCCGCG ACAATATTTT
GGGCGACTAT GTCATCCATA 551 CGGTCGAAAT CCCCGTTCCC ATCCATTTGG
ATTCGGATGA AGCCGTATGC 601 CGTCTGAAAG CCGTACTCGA GCCCTTGTGC
GCGCCCTACA TCCCCGCCAT 651 CCAACGGsAT TTGGAAAACG TGCAGGCGGA
AAAACTGTTT ATCACGCCCG 701 CCGCCAGACC GCGCGTTACC CGCGTGCCGT
ACGATGACAA GGCATACCGC 751 ATCATCGTCC GCTTCGCTTC CCCCGTTTCA
AAGCGGCTGG AAATCCAACA 801 GGCGGTTATG GACGAATTTT TGCGCGTACA
ATACCGCCTG TTAAATCACC 851 CCGCCGGCTC CGAAACACTT TAA
This corresponds to the amino acid sequence <SEQ ID 478; ORF
127>:
TABLE-US-00668 m127.pep 1 MEIWNMLDTW LGAVPIRAEA VESVAAVAAL
LLARALLLNI HFKRHPDFGI 51 ESKRRFLVAS RNITLLLVLF SLAFIWSAQI
QTLALSMFAV AAAVVVATKE 101 LIMCLSGSIL RSATQQYSVG DYIEINGLRG
RVVDINLLNT LMMQVGPNPL 151 VGQLAGTTVS FPNSLLLSHP VRRDNILGDY
VIHTVEIPVP IHLDSDEAVC 201 RLKAVLEPLC APYIPAIQRX LENVQAEKLF
ITPAARPRVT RVPYDDKAYR 251 IIVRFASPVS KRLEIQQAVM DEFLRVQYRL
LNHPAGSETL *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 127
shows 97.9% identity over a 290 aa overlap with a predicted ORF
(ORF 127.ng) from N. gonorrhoeae:
TABLE-US-00669 m127/g127 10 20 30 40 50 60 m127.pep
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVAS
|||||||:|| ||||||||:|||||||||||||||||||||:||||||||||||||||| g127
MEIWNMLNTWPDAVPIRAEAAESVAAVAALLLARALLLNIHFRRHPDFGIESKRRFLVAS 10 20
30 40 50 60 70 80 90 100 110 120 m127.pep
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g127
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG 70 80
90 100 110 120 130 140 150 160 170 180 m127.pep
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g127
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY 130
140 150 160 170 180 190 200 210 220 230 240 m127.pep
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRXLENVQAEKLFITPAARPRVT
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| g127
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRYLENVQAEKLFITPAARPRVT 190
200 210 220 230 240 250 260 270 280 290 m127.pep
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNHPAGSETLX
||||||||||||||||||||||||||||||||||||||||||||||||||| g127
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNHPAGSETLX 250 260 270 280
290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 479>:
TABLE-US-00670 a127.seq 1 ATGGAAATAT GGAATATGTT GGACACTTGG
CTCGGTGCCG TCCCGATACG 51 TGCGGAGGCG GTCGAATCCG TGGCGGTGGT
CGCGGCTTTG CTGCTGGCGC 101 GCGCCCTTCT GTTGAATATC CACTTCAAAC
GGCATCCGGA TTTCGGCATC 151 GAAAGCAAGC GGCGGTTTTT GGTTGCCAGC
CGCAATATAA CGCTGCTTTT 201 GGTGCTGTTT TCGCTGGCAT TTATCTGGTC
GGCGCAAATC CAAACGCTGG 251 CTTTGTCGAT GTTTGCGGTG GCGGCGGCGG
TCGTCGTGGC GACGAAGGAA 301 CTGATTATGT GTCTGTCGGG CAGCATTTTA
AGGTCTGCCA CCCAGCAATA 351 CTCGGTCGGC GACTATATCG AAATCAACGG
CCTGCGCGGG CGCGTGGTCG 401 ACATCAACCT GTTGAACACG CTGATGATGC
AGGTCGGTCC GAACCCCTTG 451 GTCGGACAGC TTGCGGGAAC CACCGTTTCT
TTCCCCAACA GCCTGTTGTT 501 GAGCCACCCC GTGCGCCGCG ACAATATTTT
GGGCGACTAC GTCATCCATA 551 CGGTCGAAAT CCCGGTTCCC ATCCATTTGG
ATTCGGATGA AGCCGTATGC 601 CGTCTGAAAG CCGTACTCGA GCCCTTGTGC
GCGCCCTACA TCCCCGCCAT 651 CCAACGGCAT TTGGAAAACG TGCAGGCGGA
AAAACTGTTT ATCACGCCCG 701 CCGCCAAACC GCGCGTTACC CGCGTGCCGT
ACGATGACAA GGCATACCGC 751 ATCATCGTCC GCTTCGCCTC CCCCGTTTCA
AAGCGGCTGG AAATCCAACA 801 GGCGGTTATG GACGAATTTT TGCGCGTACA
ATACCGCCTG TTAAATTACC 851 CCGCCGGCTC CGAAACACTT TAA
This corresponds to the amino acid sequence <SEQ ID 480; ORF
127.a>:
TABLE-US-00671 a127.pep 1 MEIWNMLDTW LGAVPIRAEA VESVAVVAAL
LLARALLLNI HFKRHPDFGI 51 ESKRRFLVAS RNITLLLVLF SLAFIWSAQI
QTLALSMFAV AAAVVVATKE 101 LIMCLSGSIL RSATQQYSVG DYIEINGLRG
RVVDINLLNT LMMQVGPNPL 151 VGQLAGTTVS FPNSLLLSHP VRRDNILGDY
VIHTVEIPVP IHLDSDEAVC 201 RLKAVLEPLC APYIPAIQRH LENVQAEKLF
ITPAAKPRVT RVPYDDKAYR 251 IIVRFASPVS KRLEIQQAVM DEFLRVQYRL
LNYPAGSETL * m127/a127 98.6% identity in 290 aa overlap 10 20 30 40
50 60 m127.pep
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVAS
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a127
MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKRHPDFGIESKRRFLVAS 10 20
30 40 50 60 70 80 90 100 110 120 m127.pep
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a127
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG 70 80
90 100 110 120 130 140 150 160 170 180 m127.pep
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a127
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY 130
140 150 160 170 180 190 200 210 220 230 240 m127.pep
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRXLENVQAEKLFITPAARPRVT
||||||||||||||||||||||||||||||||||||||| |||||||||||||||:|||| al27
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAAKPRVT 190
200 210 220 230 240 250 260 270 280 290 m127.pep
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNHPAGSETLX
||||||||||||||||||||||||||||||||||||||||||:|||||||| a127
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETLX 250 260 270 280
290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 481>:
TABLE-US-00672 g128.seq 1 atgattgaca acgCActgct ccacttgggc
gaagaaccCC GTTTTaatca 51 aatccaaacc gaagACAtca AACCCGCCGT
CCAAACCGCC ATCGCCGAAG 101 CGCGCGGACA AATCGCCGCC GTCAAAGCGC
AAACGCACAC CGGCTGGGCG 151 AACACCGTCG AGCGTCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTCGTG TCCCATCTCA ACTCCGTCGT
CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG CCTGAAATCA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAACTGTA CAACCGCTTC
AAAACCATCA AAAATTCCCC 351 CGAATTTGCA ACGCTTTCCC CCGCACAAAA
AACCAAGCTC GATCACGACC 401 TGCGCGATTT CGTATTGAGC GGCGCGGAAC
TGCCGCCCGA ACGGCAGGCA 451 GAACTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAGGCAA AACAGGTTAC
AAAATCGGCT TGCAGATTCC 651 GCACTACCTT GCCGTTATCC AATACGCCGG
CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGTGCCA
GCGAACTTTC AAACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCATTGAA 801 AACCGccaaa cTGCTCGGCT TTAAAAATTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC GAACAGGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAACACCTCG GTCTCGCCGA
CCCGCAGCCG TGGGACTTGA 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTTCTGGCAG GCCTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
CGCCGAAAAA ACCGTTCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCAAAACC 1201 ATCGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACtaca AAGGCCGCCG
CCGCTTTGCC GACGgcacGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCGCCCC GCCCGTCGGC 1351 GGCAAAGAAG CGCGTTTAAG CCACGACGAA
ATCCTCACCC TCTTCCACGA 1401 AacCGGCCAC GGACTGCACC ACCTGCTTAC
CCAAGTGGAC GAACTGGGCG 1451 TGTCCGGCAT CAAcggcgtA GAATGGGACG
CGGTCGAACT GCCCAGCCAG 1501 TTTATGGAAA ACTTCGTTTG GGAATACAAT
GTATTGGCAC AAATGTCCGC 1551 CCACGAAGAA AccgGCGAGC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TcgcCGCCAA AAACTTCCAG CGCGGTATGT
TCCTCGTCCG GCAAATGGAG 1651 TTCGCCCTCT TCGATATGAT GATTTACAGT
GAAAGCGACG AATGCCGTCT 1701 GAAAAACTGG CAGCAGGTTT TAGACAGCGT
GCGCAAAGAA GTcGCCGTCA 1751 TCCAACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCacatctTC 1801 GCcggcGGCT ATTCCGCAGG CTATTACAGC
TACGCATGGG CCGAAGTCCt 1851 cAGCACCGAT GCCTACGCCG CCTTTGAAGA
AAGcGACGac gtcGCCGCCA 1901 CAGGCAAACG CTTCTGGCAA GAAAtccttg
ccgtcggcgg ctCCCGCAGC 1951 gcgGCGGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTGCTGCGC CAaagcggtT TCGACAACGC
gGCttgA
This corresponds to the amino acid sequence <SEQ ID 482; ORF
128.ng>:
TABLE-US-00673 g128.pep 1 MIDNALLHLG EEPRFNQIQT EDIKPAVQTA
IAEARGQIAA VKAQTHTGWA 51 NTVERLTGIT ERVGRIWGVV SHLNSVVDTP
ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFA TLSPAQKTKL
DHDLRDFVLS GAELPPERQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYAGNRE
LREQIYRAYV TRASELSNDG 251 KFDNTANIDR TLENALKTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR EHLGLADPQP
WDLSYAGEKL REAKYAFSET 351 EVKKYFPVGK VLAGLFAQIK KLYGIGFAEK
TVPVWHKDVR YFELQQNGKT 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFA
DGTLQLPTAY LVCNFAPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGEPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS ESDECRLKNW QQVLDSVRKE
VAVIQPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSTD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR QSGFDNAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 483>:
TABLE-US-00674 m128.seq (partial) 1 ATGACTGACA ACGCACTGCT
CCATTTGGGC GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA
AACCCGCCCT GCAAACCGCC ATCGCCGAAG 101 CGCGCGAACA AATCGCCGCC
ATCAAAGCCC AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC
CGGCATCACC GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA
ACTGCGTCGC CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG
CCCGAAATCA CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA
CAACCGCTTC AAAACCATCA AAAATTCCCC 351 CGAATTCGAC ACCCTCTCCC
CCGCACAAAA AACCAAACTC AACCAC 1 TACGCCAGCG AAAAACTGCG CGAAGCCAAA
TACGCGTTCA GCGAAACCGA 51 wGTCAAAAAA TAyTTCCCyG TCGGCAAwGT
ATTAAACGGA CTGTTCGCCC 101 AAmTCAAAAA ACTmTACGGC ATCGGATTTA
CCGAAAAAAC yGTCCCCGTC 151 TGGCACAAAG ACGTGCGCTA TTkTGAATTG
CAACAAAACG GCGAAmCCAT 201 AGGCGGCGTT TATATGGATT TGTACGCACG
CGAAGGCAAA CGCGGCGGCG 251 CGTGGATGAA CGACTACAAA GGCCGCCGCC
GTTTTTCAGA CGGCACGCTG 301 CAAyTGCCCA CCGCCTACCT CGTCTGCAAC
TTCGCCCCAC CCGTCGGCGG 351 CAGGGAAGCC CGCyTGAGCC ACGACGAAAT
CCTCATCCTC TTCCACGAAA 401 CCGGACACGG GCTGCACCAC CTGCTTACCC
AAGTGGACGA ACTGGGCGTA 451 TCCGGCATCA ACGGCGTAkA ATGGGACGCG
GTCGAACTGC CCAGCCAGTT 501 TATGGAAAAT TTCGTTTGGG AATACAATGT
CTTGGCACAA mTGTCAGCCC 551 ACGAAGAAAC CGGcgTTCCC yTGCCGAAAG
AACTCTTsGA CAAAwTGCTC 601 GCCGCCAAAA ACTTCCAAsG CGGCATGTTC
yTsGTCCGGC AAwTGGAGTT 651 CGCCCTCTTT GATATGATGA TTTACAGCGA
AGACGACGAA GGCCGTCTGA 701 AAAACTGGCA ACAGGTTTTA GACAGCGTGC
GCAAAAAAGT CGCCGTCATC 751 CAGCCGCCCG AATACAACCG CTTCGCCTTG
AGCTTCGGCC ACATCTTCGC 801 AGGCGGCTAT TCCGCAGCTn ATTACAGCTA
CGCGTGGGCG GAAGTATTGA 851 GCGCGGACGC ATACGCCGCC TTTGAAGAAA
GCGACGATGT CGCCGCCACA 901 GGCAAACGCT TTTGGCAGGA AATCCTCGCC
GTCGGGGnAT CGCGCAGCGG 951 nGCAGAATCC TTCAAAGCCT TCCGCGGCCG
CGAACCGAGC ATAGACGCAC 1001 TCTTGCGCCA CAGCGGTTTC GACAACGCGG
TCTGA
This corresponds to the amino acid sequence <SEQ ID 484; ORF
128>:
TABLE-US-00675 m128.pep (partial) 1 MTDNALLHLG EEPRFDQIKT
EDIKPALQTA IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV
SHLNCVADTP ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD
TLSPAQKTKL NH // 1 YASEKLREAK YAFSETXVKK YFPVGXVLNG LFAQXKKLYG
IGFTEKTVPV 51 WHKDVRYXEL QQNGEXIGGV YMDLYAREGK RGGAWMNDYK
GRRRFSDGTL 101 QLPTAYLVCN FAPPVGGREA RLSHDEILIL FHETGHGLHH
LLTQVDELGV 151 SGINGVXWDA VELPSQFMEN FVWEYNVLAQ XSAHEETGVP
LPKELXDKXL 201 AAKNFQXGMF XVRQXEFALF DMMIYSEDDE GRLKNWQQVL
DSVRKKVAVI 251 QPPEYNRFAL SFGHIFAGGY SAAXYSYAWA EVLSADAYAA
FEESDDVAAT 301 GKRFWQEILA VGXSRSGAES FKAFRGREPS IDALLRHSGF
DNAV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 128
shows 91.7% identity over a 475 aa overlap with a predicted ORF
(ORF 128.ng) from N. gonorrhoeae:
TABLE-US-00676 m128/g128 10 20 30 40 50 60 g128.pep
MIDNALLHLGEEPRFNQIQTEDIKPAVQTAIAEARGQIAAVKAQTHTGWANTVERLTGIT |
|||||||||||||:||:|||||||:|||||||| ||||:||||||||||||| ||||| m128
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 g128.pep
ERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFA
|||||||||||||| |:|||||||||||||||||||||||||||||||||||||||||| m128
ERVGRIWGVVSHLNCVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 g128.pep
TLSPAQKTKLDHDLRDFVLSGAELPPERQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY
||||||||||:| m128 TLSPAQKTKLNH 130 // 340 350 360 g128.pep
YAGEKLREAKYAFSETEVKKYFPVGKVLAG ||:||||||||||||| |||||||| || | m128
YASEKLREAKYAFSETXVKKYFPVGXVLNG 10 20 30 370 380 390 400 410 420
g128.pep
LFAQIKKLYGIGFAEKTVPVWHKDVRYFELQQNGKTIGGVYMDLYAREGKRGGAWMNDYK ||||
||||||||:||||||||||||| ||||||::|||||||||||||||||||||||| m128
LFAQXKKLYGIGFTEKTVPVWHKDVRYXELQQNGEXIGGVYMDLYAREGKRGGAWMNDYK 40 50
60 70 80 90 430 440 450 460 470 480 g128.pep
GRRRFADGTLQLPTAYLVCNFAPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVDELGV
|||||:|||||||||||||||||||||:|||||||||| ||||||||||||||||||||| m128
GRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVDELGV 100
110 120 130 140 150 490 500 510 520 530 540 g128.pep
SGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGEPLPKELFDKMLAAKNFQRGMF ||||||
||||||||||||||||||||||| ||||||| |||||| || ||||||| ||| m128
SGINGVXWDAVELPSQFMENFVWEYNVLAQXSAHEETGVPLPKELXDKXLAAKNFQXGMF 160
170 180 190 200 210 550 560 570 580 590 600 g128.pep
LVRQMEFALFDMMIYSESDECRLKNWQQVLDSVRKEVAVIQPPEYNRFANSFGHIFAGGY |||
|||||||||||: || ||||||||||||||: ||||||||||||| ||||||||| m128
XVRQXEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIFAGGY 220
230 240 250 260 270 610 620 630 640 650 660 g128.pep
SAGYYSYAWAEVLSTDAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPS ||:
||||||||||:||||||||||||||||||||||||||| |||:||||||||||||| m128
SAAXYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGXSRSGAESFKAFRGREPS 280
290 300 310 320 330 670 679 g128.pep IDALLRQSGFDNAAX ||||||:||||||:
m128 IDALLRHSGFDNAVX 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 485>:
TABLE-US-00677 a128.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATTGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCAC
CGACACGCCC GAACTGCGCG 251 CCGCCTACAA TGAATTAATG CCCGAAATTA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAACTCCCC 351 CGAGTTCGAC ACCCTCTCCC ACGCGCAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAATTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCT 601 GCCGCGCAAA GCGAAGGCAA AACAGGCTAC
AAAATCGGTT TGCAGATTCC 651 GCACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCAAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAGCTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACCCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTCG GCCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCACCCC GCCCGTCGGC 1351 GGCAAAGAAG CCCGCTTGAG CCATGACGAA
ATCCTCACCC TCTTCCACGA 1401 AACCGGACAC GGCCTGCACC ACCTGCTTAC
CCAAGTCGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CAGTCGAACT GCCCAGTCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCGC AAATGTCCGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGAATGT
TCCTCGTCCG CCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAGAA GTCGCCGTCG 1751 TCCGACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGCT TCGACAACGC
GGCTTGA
This corresponds to the amino acid sequence <SEQ ID 486; ORF
128.a>:
TABLE-US-00678 a128.pep 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVTDTP
ELRAAYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSHAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYADNRK
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLENALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLGLADLQP
WDLGYAGEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFTPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKE
VAVVRPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAA* m128/a128
66.0% identity in 677 aa overlap 10 20 30 40 50 60 m128.pep
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a128
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 m128.pep
ERVGRIWGVVSHLNCVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD
|||||||||||||| |:|||||||:||||||||||||||||||||||||||||||||||| a128
ERVGRIWGVVSHLNSVTDTPELRAAYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFD 70 80
90 100 110 120 130 m128.pep
TLSPAQKTKLNH------------------------------------------------ |||
|||||||| a128
TLSHAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 m128.pep
------------------------------------------------------------ a128
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQIYRAYV 190
200 210 220 230 240 m128.pep
------------------------------------------------------------ a128
TRASELSDDGKFDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 140 150 m128.pep
----------------------------------YASEKLREAKYAFSETXVKKYFPVGX ||:
||||||||||||| |||||||| a128
ARRAKPYAEKDLAEVKAFARESLGLADLQPWDLGYAGEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 160 170 180 190 200 210 m128.pep
VLNGLFAQXKKLYGIGFTEKTVPVWHKDVRYXELQQNGEXIGGVYMDLYAREGKRGGAWM
|||||||| |||||||||||||||||||||| |||||||: |||||||||||||||||||| a128
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 220 230 240 250 260 270 m128.pep
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD
|||||||||||||||||||||||||:|||||:|||||||||| ||||||||||||||||| a128
NDYKGRRRFSDGTLQLPTAYLVCNFTPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD 430
440 450 460 470 480 280 290 300 310 320 330 m128.pep
ELGVSGINGVXWDAVELPSQFMENFVWEYNVLAQXSAHEETGVPLPKELXDKXLAAKNFQ
|||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||| a128
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540 340 350 360 370 380 390 m128.pep
XGMFXVRQXEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIF |||
||| ||||||||||||||||||||||||||||||:|||::|||||||| |||||| a128
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIF 550
560 570 580 590 600 400 410 420 430 440 450 m128.pep
AGGYSAAXYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGXSRSGAESFKAFRG
||||||: |||||||||||||||||||||||||||||||||||||| |||: ||||||||| a128
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG 610
620 630 640 650 660 460 470 m128.pep REPSIDALLRHSGFDNAVX
|||||||||||||||||: a128 REPSIDALLRHSGFDNAAX 670
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 487>:
TABLE-US-00679 g128-1.seq (partial) 1 ATGATTGACA ACGCACTGCT
CCACTTGGGC GAAGAACCCC GTTTTAATCA 51 AATCAAAACC GAAGACATCA
AACCCGCCGT CCAAACCGCC ATCGCCGAAG 101 CGCGCGGACA AATCGCCGCC
GTCAAAGCGC AAACGCACAC CGGCTGGGCG 151 AACACCGTCG AGCGTCTGAC
CGGCATCACC GAACGCGTCG GCAGGATTTG 201 GGGCGTCGTG TCCCATCTCA
ACTCCGTCGT CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG
CCTGAAATCA CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAACTGTA
CAACCGCTTC AAAACCATCA AAAATTCCCC 351 CGAATTTGCA ACGCTTTCCC
CCGCACAAAA AACCAAGCTC GATCACGACC 401 TGCGCGATTT CGTATTGAGC
GGCGCGGAAC TGCCGCCCGA ACGGCAGGCA 451 GAACTGGCAA AACTGCAAAC
CGAAGGCGCG CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA
CCGACGCGTT CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT
CCCGAAGACG CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAGGCAA
AACAGGTTAC AAAATCGGCT TGCAGATTCC 651 GCACTACCTT GCCGTTATCC
AATACGCCGG CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT
ACCCGTGCCA GCGAACTTTC AAACGACGGC 751 AAATTCGACA ACACCGCCAA
CATCGACCGC ACGCTCGAAA ACGCATTGAA 801 AACCGCCAAA CTGCTCGGCT
TTAAAAATTA CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC
GAACAGGTTT TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA
CGCCGAAAAA GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAACACCTCG
GTCTCGCCGA CCCGCAGCCG TGGGACTTGA 1001 GCTACGCCGG CGAAAAACTG
CGCGAAGCCA AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC
CGTCGGCAAA GTTCTGGCAG GCCTGTTCGC 1101 CCAAATCAAA AAACTCTACG
GCATCGGATT CGCCGAAAAA ACCGTTCCCG 1151 TCTGGCACAA AGACGTGCGC
TATTTTGAAT TGCAACAAAA CGGCAAAACC 1201 ATCGGCGGCG TTTATATGGA
TTTGTACGCA CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA
AAGGCCGCCG CCGCTTTGCC GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC
CTCGTCTGCA ACTTCGCCCC GCCCGTCGGC 1351 GGCAAAGAAG CGCGTTTAAG
CCACGACGAA ATCCTCACCC TCTTCCACGA 1401 AACCGGCCAC GGACTGCACC
ACCTGCTTAC CCAAGTGGAC GAACTGGGCG 1451 TGTCCGGCAT CAACGGCGTA AAA
This corresponds to the amino acid sequence <SEQ ID 488; ORF
128-1.ng>:
TABLE-US-00680 g128-1.pep (partial) 1 MIDNALLHLG EEPRFNQIKT
EDIKPAVQTA IAEARGQIAA VKAQTHTGWA 51 NTVERLTGIT ERVGRIWGVV
SHLNSVVDTP ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFA
TLSPAQKTKL DHDLRDFVLS GAELPPERQA 151 ELAKLQTEGA QLSAKFSQNV
LDATDAFGIY FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL
AVIQYAGNRE LREQIYRAYV TRASELSNDG 251 KFDNTANIDR TLENALKTAK
LLGFKNYAEL SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR
EHLGLADPQP WDLSYAGEKL REAKYAFSET 351 EVKKYFPVGK VLAGLFAQIK
KLYGIGFAEK TVPVWHKDVR YFELQQNGKT 401 IGGVYMDLYA REGKRGGAWM
NDYKGRRRFA DGTLQLPTAY LVCNFAPPVG 451 GKEARLSHDE ILTLFHETGH
GLHHLLTQVD ELGVSGINGV K
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 489>:
TABLE-US-00681 m128-1.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATCGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCGC
CGACACGCCC GAACTGCGCG 251 CCGTCTATAA CGAACTGATG CCCGAAATCA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAATTCCCC 351 CGAATTCGAC ACCCTCTCCC CCGCACAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAACTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCC 601 GCCGCGCAAA GCGAAAGCAA AACAGGCTAC
AAAATCGGCT TGCAGATTCC 651 ACACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCGAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAACTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGCAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACGCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTGA ACCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCAG CGAAAAACTG CGCGAAGCCA
AATACGCGTT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCGCCCC ACCCGTCGGC 1351 GGCAGGGAAG CCCGCCTGAG CCACGACGAA
ATCCTCATCC TCTTCCACGA 1401 AACCGGACAC GGGCTGCACC ACCTGCTTAC
CCAAGTGGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CGGTCGAACT GCCCAGCCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCAC AAATGTCAGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGCATGT
TCCTCGTCCG GCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAAAA GTCGCCGTCA 1751 TCCAGCCGCC CGAATACAAC CGCTTCGCCT
TGAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGC
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGTT TCGACAACGC
GGTCTGA
This corresponds to the amino acid sequence <SEQ ID 490; ORF
128-1>:
TABLE-US-00682 m128-1.pep. 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVADTP
ELRAVYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSPAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSESKTGY KIGLQIPHYL AVIQYADNRE
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLANALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLNLADLQP
WDLGYASEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFAPPVG 451 GREARLSHDE ILILFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKK
VAVIQPPEYN RFALSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAV*
m128-1/g128-1 94.5% identity in 491 aa overlap 10 20 30 40 50 60
g128-1.pep
MIDNALLHLGEEPRFNQIKTEDIKPAVQTAIAEARGQIAAVKAQTHTGWANTVERLTGIT |
|||||||||||||:||||||||||:|||||||| ||||:||||||||||||| ||||| m128-1
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 g128-1.pep
ERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQDIELYNRFKLIKNSPEFA
||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| m128-1
ERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKLIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 g128-1.pep
TLSPAQKTKLDHDLRDFVLSGAELPPERQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY
||||||||||:||||||||||||||||:|||||||||||||||||||||||||||||||| m128-1
TLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 190 200 210 220 230 240 g128-1.pep
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYAGNRELREQIYRAYV
|||||||||||||||||||||||||:|||||||||||||||||||| ||||||||||||| m128-1
FDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPHYLAVIQYADNRELREQIYRAYV 190
200 210 220 230 240 250 260 270 280 290 300 g128-1.pep
TRASELSNDGKEDNTANIDRTLENALKTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL
|||||||:|||||||||||||| |||:||||||||||||||||||||||||||||||||| m128-1
TRASELSDDGKEDNTANIDRTLANALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 310 320 330 340 350 360 g128-1.pep
ARRAKPYAEKDLAEVKAFAREHLGLADPQPWDLSYAGEKLREAKYAFSETEVKKYFPVGK
||||||||||||||||||||| |:||| |||||:||:||||||||||||||||||||||| m128-1
ARRAKPYAEKDLAEVKAFARESLNLADLQPWDLGYASEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 370 380 390 400 410 420 g128-1.pep
VLAGLFAQIKKLYGIGFAEKTVPVWHKDVRYFELQQNGKTIGGVYMDLYAREGKRGGAWM ||
||||||||||||||:||||||||||||||||||||:||||||||||||||||||||| m128-1
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 430 440 450 460 470 480 g128-1.pep
NDYKGRRRFADGTLQLPTAYLVCNFAPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD
|||||||||:|||||||||||||||||||||:|||||||||| ||||||||||||||||| m128-1
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD 430
440 450 460 470 480 490 g128-1.pep ELGVSGINGVK ||||||||||: m128-1
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 491>:
TABLE-US-00683 a128-1.seq 1 ATGACTGACA ACGCACTGCT CCATTTGGGC
GAAGAACCCC GTTTTGATCA 51 AATCAAAACC GAAGACATCA AACCCGCCCT
GCAAACCGCC ATTGCCGAAG 101 CGCGCGAACA AATCGCCGCC ATCAAAGCCC
AAACGCACAC CGGCTGGGCA 151 AACACTGTCG AACCCCTGAC CGGCATCACC
GAACGCGTCG GCAGGATTTG 201 GGGCGTGGTG TCGCACCTCA ACTCCGTCAC
CGACACGCCC GAACTGCGCG 251 CCGCCTACAA TGAATTAATG CCCGAAATTA
CCGTCTTCTT CACCGAAATC 301 GGACAAGACA TCGAGCTGTA CAACCGCTTC
AAAACCATCA AAAACTCCCC 351 CGAGTTCGAC ACCCTCTCCC ACGCGCAAAA
AACCAAACTC AACCACGATC 401 TGCGCGATTT CGTCCTCAGC GGCGCGGAAC
TGCCGCCCGA ACAGCAGGCA 451 GAATTGGCAA AACTGCAAAC CGAAGGCGCG
CAACTTTCCG CCAAATTCTC 501 CCAAAACGTC CTAGACGCGA CCGACGCGTT
CGGCATTTAC TTTGACGATG 551 CCGCACCGCT TGCCGGCATT CCCGAAGACG
CGCTCGCCAT GTTTGCCGCT 601 GCCGCGCAAA GCGAAGGCAA AACAGGCTAC
AAAATCGGTT TGCAGATTCC 651 GCACTACCTC GCCGTCATCC AATACGCCGA
CAACCGCAAA CTGCGCGAAC 701 AAATCTACCG CGCCTACGTT ACCCGCGCCA
GCGAGCTTTC AGACGACGGC 751 AAATTCGACA ACACCGCCAA CATCGACCGC
ACGCTCGAAA ACGCCCTGCA 801 AACCGCCAAA CTGCTCGGCT TCAAAAACTA
CGCCGAATTG TCGCTGGCAA 851 CCAAAATGGC GGACACCCCC GAACAAGTTT
TAAACTTCCT GCACGACCTC 901 GCCCGCCGCG CCAAACCCTA CGCCGAAAAA
GACCTCGCCG AAGTCAAAGC 951 CTTCGCCCGC GAAAGCCTCG GCCTCGCCGA
TTTGCAACCG TGGGACTTGG 1001 GCTACGCCGG CGAAAAACTG CGCGAAGCCA
AATACGCATT CAGCGAAACC 1051 GAAGTCAAAA AATACTTCCC CGTCGGCAAA
GTATTAAACG GACTGTTCGC 1101 CCAAATCAAA AAACTCTACG GCATCGGATT
TACCGAAAAA ACCGTCCCCG 1151 TCTGGCACAA AGACGTGCGC TATTTTGAAT
TGCAACAAAA CGGCGAAACC 1201 ATAGGCGGCG TTTATATGGA TTTGTACGCA
CGCGAAGGCA AACGCGGCGG 1251 CGCGTGGATG AACGACTACA AAGGCCGCCG
CCGTTTTTCA GACGGCACGC 1301 TGCAACTGCC CACCGCCTAC CTCGTCTGCA
ACTTCACCCC GCCCGTCGGC 1351 GGCAAAGAAG CCCGCTTGAG CCATGACGAA
ATCCTCACCC TCTTCCACGA 1401 AACCGGACAC GGCCTGCACC ACCTGCTTAC
CCAAGTCGAC GAACTGGGCG 1451 TATCCGGCAT CAACGGCGTA GAATGGGACG
CAGTCGAACT GCCCAGTCAG 1501 TTTATGGAAA ATTTCGTTTG GGAATACAAT
GTCTTGGCGC AAATGTCCGC 1551 CCACGAAGAA ACCGGCGTTC CCCTGCCGAA
AGAACTCTTC GACAAAATGC 1601 TCGCCGCCAA AAACTTCCAA CGCGGAATGT
TCCTCGTCCG CCAAATGGAG 1651 TTCGCCCTCT TTGATATGAT GATTTACAGC
GAAGACGACG AAGGCCGTCT 1701 GAAAAACTGG CAACAGGTTT TAGACAGCGT
GCGCAAAGAA GTCGCCGTCG 1751 TCCGACCGCC CGAATACAAC CGCTTCGCCA
ACAGCTTCGG CCACATCTTC 1801 GCAGGCGGCT ATTCCGCAGG CTATTACAGC
TACGCGTGGG CGGAAGTATT 1851 GAGCGCGGAC GCATACGCCG CCTTTGAAGA
AAGCGACGAT GTCGCCGCCA 1901 CAGGCAAACG CTTTTGGCAG GAAATCCTCG
CCGTCGGCGG ATCGCGCAGC 1951 GCGGCAGAAT CCTTCAAAGC CTTCCGCGGA
CGCGAACCGA GCATAGACGC 2001 ACTCTTGCGC CACAGCGGCT TCGACAACGC
GGCTTGA
This corresponds to the amino acid sequence <SEQ ID 492; ORF
128-1.a>:
TABLE-US-00684 a128-1.pep 1 MTDNALLHLG EEPRFDQIKT EDIKPALQTA
IAEAREQIAA IKAQTHTGWA 51 NTVEPLTGIT ERVGRIWGVV SHLNSVTDTP
ELRAAYNELM PEITVFFTEI 101 GQDIELYNRF KTIKNSPEFD TLSHAQKTKL
NHDLRDFVLS GAELPPEQQA 151 ELAKLQTEGA QLSAKFSQNV LDATDAFGIY
FDDAAPLAGI PEDALAMFAA 201 AAQSEGKTGY KIGLQIPHYL AVIQYADNRK
LREQIYRAYV TRASELSDDG 251 KFDNTANIDR TLENALQTAK LLGFKNYAEL
SLATKMADTP EQVLNFLHDL 301 ARRAKPYAEK DLAEVKAFAR ESLGLADLQP
WDLGYAGEKL REAKYAFSET 351 EVKKYFPVGK VLNGLFAQIK KLYGIGFTEK
TVPVWHKDVR YFELQQNGET 401 IGGVYMDLYA REGKRGGAWM NDYKGRRRFS
DGTLQLPTAY LVCNFTPPVG 451 GKEARLSHDE ILTLFHETGH GLHHLLTQVD
ELGVSGINGV EWDAVELPSQ 501 FMENFVWEYN VLAQMSAHEE TGVPLPKELF
DKMLAAKNFQ RGMFLVRQME 551 FALFDMMIYS EDDEGRLKNW QQVLDSVRKE
VAVVRPPEYN RFANSFGHIF 601 AGGYSAGYYS YAWAEVLSAD AYAAFEESDD
VAATGKRFWQ EILAVGGSRS 651 AAESFKAFRG REPSIDALLR HSGFDNAA*
m128-1/a128-1 97.8% identity in 677 aa overlap 10 20 30 40 50 60
a128-1.pep
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTGWANTVEPLTGIT 10 20
30 40 50 60 70 80 90 100 110 120 a128-1.pep
ERVGRIWGVVSHLNSVTDTPELRAAYNELMPEITVFFTEIGQDIELYNRFKLIKNSPEFD
||||||||||||||||:|||||||:||||||||||||||||||||||||||||||||||| m128-1
ERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQDIELYNRFKLIKNSPEFD 70 80
90 100 110 120 130 140 150 160 170 180 a128-1.pep
TLSHAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
TLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIY 130
140 150 160 170 180 190 200 210 220 230 240 a128-1.pep
FDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQIYRAYV
|||||||||||||||||||||||||:|||||||||||||||||||||||:|||||||||| m128-1
FDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPHYLAVIQYADNRELREQIYRAYV 190
200 210 220 230 240 250 260 270 280 290 300 a128-1.pep
TRASELSDDGKEDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| m128-1
TRASELSDDGKEDNTANIDRTLANALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL 250
260 270 280 290 300 310 320 330 340 350 360 a128-1.pep
ARRAKPYAEKDLAEVKAFARESLGLADLQPWDLGYAGEKLREAKYAFSETEVKKYFPVGK
|||||||||||||||||||||||:||||||||||||:||||||||||||||||||||||| m128-1
ARRAKPYAEKDLAEVKAFARESLNLADLQPWDLGYASEKLREAKYAFSETEVKKYFPVGK 310
320 330 340 350 360 370 380 390 400 410 420 a128-1.pep
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
VLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYFELQQNGETIGGVYMDLYAREGKRGGAWM 370
380 390 400 410 420 430 440 450 460 470 480 a128-1.pep
NDYKGRRRFSDGTLQLPTAYLVCNFTPPVGGKEARLSHDEILTLFHETGHGLHHLLTQVD
|||||||||||||||||||||||||:|||||:|||||||||| ||||||||||||||||| m128-1
NDYKGRRRFSDGTLQLPTAYLVCNFAPPVGGREARLSHDEILILFHETGHGLHHLLTQVD 430
440 450 460 470 480 490 500 510 520 530 540 a128-1.pep
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 490
500 510 520 530 540 550 560 570 580 590 600 a128-1.pep
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIF
|||||||||||||||||||||||||||||||||||||||:|||::|||||||| |||||| m128-1
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIF 550
560 570 580 590 600 610 620 630 640 650 660 a128-1.pep
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m128-1
AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRG 610
620 630 640 650 660 670 679 a128-1.pep REPSIDALLRHSGFDNAAX
|||||||||||||||||: m128-1 REPSIDALLRHSGFDNAVX 670 a128-1/P44573
sp|P44573|OPDA_HAEIN OLIGOPEPTIDASE A >gi|1075082|pir||O64055
oligopeptidase A (prlC) homolog - Haemophilus influenzae (strain Rd
KW20) >gi|1573174 (U32706) oligopeptidase A (prlC) [Haemophilus
influenzae Rd] Length = 681 Score = 591 bits (1507), Expect = e-168
Identities = 309/677 (45%), Positives = 415/677 (60%), Gaps = 4/677
(0%) Query: 4
NALLHLGEEPRFDQIKTEDIKPALQTXXXXXXXXXXXXXXXTHTGWANTVEPLTGITERV 63 N
LL++ P F QIK E I+PA++ H W N + PLT +R+ Sbjct: 5
NPLLNIQGLPPFSQIKPEHIRPAVEKLIQDCRNTIEQVLKQPHFTWENFILPLTETNDRL 64
Query: 64
GRIWGVVSHLNSVTDTPELRAAYNELMPEITVFFTEIGQDIELYNRFKTIKNSPEFDTLS 123 R
W VSHLNSV ++ ELR AY +P ++ + T +GQ LYN + +KNS EF S Sbjct: 65
NRAWSPVSHLNSVKNSTELREAYQTCLPLLSEYSTWVGQHKGLYNAYLALKNSAEFADYS 124
Query: 124
HAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGAQLSAKFSQNVLDATDAFGIYFDD 183
AQK + + LRDF LSG L E+Q ++ ++L+++FS NVLDAT + ++ Sbjct: 125
IAQKKAIENSLRDFELSGIGLSEEKQQRYGEIVARLSELNSQFSNNVLDATMGWEKLIEN 184
Query: 184
AAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRKLREQTYRAYVTRA 243 A
LAG+PE AL +A+S+G GY+ L+IP YL V+ Y +NR LRE++YRAY TRA Sbjct: 185
EAELAGLPESALQAAQQSAESKGLKGYRFTLEIPSYLPVMTYCENRALREEMYRAYATRA 244
Query: 244
SELSDD-GKFDNTANIDRTLENALQTAKLLGFKNYAELSLATKMADTPEQVLNFLHDLAR 302 SE
+ GK+DN+ ++ L ++ AKLLGF Y ELSLATKMA+ P+QVL+FL LA Sbjct: 245
SEQGPNAGKWDNSKVMEEILTLRVELAKLLGFNTYTELSLATKMAENPQQVLDFLDHLAE 304
Query: 303
RAKPYAEKDLAEVKAFARESLGLADLQPWDLGYAGEKLREAKYAFSETEVKKYFPVGKVL 362
RAKP EK+L E+K + + G+ +L PWD+G+ EK ++ YA ++ E++ YFP +V+ Sbjct: 305
RAKPQGEKELQELKGYCEKEFGVTELAPWDIGFYSEKQKQHLYAINDEELRPYFPENRVI 364
Query: 363
NGLFAQIKKLYGIGFTE-KTVPVWHKDVRYFEL-QQNGETIGGVYMDLYAREGKRGGAWM 420
+GLF IK+++ I E K V WHKDVR+F+L +N + G Y+DLYARE KRGGAWM Sbjct: 365
SGLFELIKRIFNIRAVERKGVDTWHKDVRFFDLIDENDQLRGSFYLDLYAREHKRGGAWM 424
Query: 421
NDYKGRRRFSDGTLQLPTAYLVCNFTPPVGGKEARLSHDEIXXXXXXXXXXXXXXXXQVD 480 +D
GR+R DG+++ P AYL CNF P+G K A +H+E+ Q+D Sbjct: 425
DDCIGRKRKLDGSIETPVAYLTCNFNAPIGNKPALFTHNEVTTLFHEFGHGIHHMLTQID 484
Query: 481
ELGVSGINGVEWDAVELPSQFMENFVWEYNVLAQMSAHEETGVPLPKELFDKMLAAKNFQ 540
V+GINGV WDAVELPSQFMEN+ WE LA +S H ETG PLPKE ++L AKNFQ Sbjct: 485
VSDVAGINGVPWDAVELPSQFMENWCWEEEALAFISGHYETGEPLPKEKLTQLLKAKNFQ 544
Query: 541
RGMFLVRQMEFALFDMMIYSEDDEGRLKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIF 600
MF++RQ+EF +FD ++ D + L SV+ +VAV++ ++ R +SF HIF Sbjct: 545
AAMFILRQLEFGIFDFRLHHTFDAEKTNQILDTLKSVKSQVAVIKGVDWARAPHSFSHIF 604
Query: 601
XXXXXXXXXXXXWAEVLSADAYAAFEESDDV-AATGKRFWQEILAVGGSRSAAESFKAFR 659
WAEVLSADAY+ FEE TGK F EIL GGS E FK FR Sbjct: 605
AGGYAAGYYSYLWAEVLSADAYSRFEEEGIFNPITGKSFLDEILTRGGSEEPMELFKRFR 664
Query: 660 GREPSIDALLRHSGFDN 676 GREP +DALLRH G N Sbjct: 665
GREPQLDALLRHKGIMN 681
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 493>:
TABLE-US-00685 g129.seq 1 ATGCTTTCAC CTCCTCGGCG TAAAACGGCG
GCACATCAAT CAAGCCGTCT 51 TTCATTTGCG TGCGGAAAAA ATGCGGCGTG
TTGCCGTGAT CAAAATCAAT 101 ATCGTGCAGC ATCCAGCCCA AATCGCGGTT
TGCCTCGCTT TCCGATAACG 151 CCGACGGCGG CAGCGGTTCA CCCTTATCCG
CGCTTTCGCC ATTTGCCCTT 201 TCAGGCTGCG GGCATAGGGG CGGAACAGGC
GGCGGTCGAA TCCTGTTTCA 251 TCCGGACAAA CGCGTTGGCA GTCGGAAAAT
CCGGCCGGCC GTGTCAAATA 301 ATGCGTTACT TTGGCCGGGT CTTGTCCTTT
GTAAGCGGCG GTCTTTTTTT 351 GCGCGCCATC CGCATCTGTT TGGGCGCATG
GCAAACGGCG GCTGCCGTAC 401 AATCAAAATG TTTGGCGATT TCATGCAGAC
AGGCATCCGG ATGCCGCCCG 451 ACATATCGAG CCGGTTTTTG CCTATCCGAT
TTGGCGGCAT TTAGGCCGGT 501 AACTTGA
This corresponds to the amino acid sequence <SEQ ID 494; ORF
129.ng>:
TABLE-US-00686 g129.pep 1 MLSPPRRKTA AHQSSRLSFA CGKNAACCRD
QNQYRAASSP NRGLPRFPIT 51 PTAAAVHPYP RFRHLPFQAA GIGAEQAAVE
SCFIRTNALA VGKSGRPCQI 101 MRYFGRVLSF VSGGLFLRAI RICLGAWQTA
AAVQSKCLAI SCRQASGCRP 151 TYRAGFCLSD LAAFRPVT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 495>:
TABLE-US-00687 m129.seq (partial) 1 ..TATCTGCGCT TTCACTATTT
GCCCTTTCAG GCTGCGGGCA TAGGGACGGA 51 ACAGGTAGCG GTCAAATCCT
GTTTCATCCA AATAAACACG TTGGTAGTCG 101 GAAAATTCGG CCGGCTGTGT
CAAATAATGC GTTACTTTGG CCGGGTCTTG 151 TTCTTTGTAA GTGGTGGTCT
TTTTTTGCGC GTTATCCCCA TCTGTTTGAG 201 TGCATAGCAA ATGGTGGCTG
CCGTACAATC AAAATGTTTG GCGATTTCAT 251 GCAGATAGGC ATCCGGGTGT
TGCCCAACAT ATTGAGCCGG TTTTTGCCTA 301 TCCGATTTGA CGGCATTTAG
ACCGGTAACT TGA
This corresponds to the amino acid sequence <SEQ ID 496; ORF
129>:
TABLE-US-00688 m129.pep (partial) 1 ..YLRFHYLPFQ AAGIGTEQVA
VKSCFIQINT LVVGKFGRLC QIMRYFGRVL 51 FFVSGGLFLR VIPICLSAXQ
MVAAVQSKCL AISCRXASGC CPTYXAGFCL 101 SDLTAFRPVT *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 129
shows 79.1% identity over a 110 aa overlap with a predicted ORF
(ORF 129.ng) from N. gonorrhoeae:
TABLE-US-00689 m129/g129 10 20 30 m129.pep
YLRFHYLPFQAAGIGTEQVAVKSCFIQINT | ||::|||||||||:||:||:||||: |: g129
RDQNQYRAASSPNRGLPRFPITPTAAAVHPYPRFRHLPFQAAGIGAEQAAVESCFIRTNA 30 40
50 60 70 80 40 50 60 70 80 90 m129.pep
LVVGKFGRLCQIMRYFGRVLFFVSGGLFLRVIPICLSAXQMVAAVQSKCLAISCRXASGC |:|||
|| ||||||||||| |||||||||:| |||:| | :||||||||||||| |||| g129
LAVGKSGRPCQIMRYFGRVLSFVSGGLFLRAIRICLGAWQTAAAVQSKCLAISCRQASGC 90 100
110 120 130 140 100 110 m129.pep CPTYXAGFCLSDLTAFRPVTX |||
||||||||:||||||| g129 RPTYRAGFCLSDLAAFRPVTX 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 497>:
TABLE-US-00690 a129.seq (partial) 1 TATCTGCGCT TTCACTATTT
GCCCTTTCAG GCTGCGGGCA TAGGGACGGA 51 ACAGGTAGCG GTCAAATCCT
GTTTCATCCA AATAAACACG TTGGTAGTCG 101 GAAAATTCGG CCAGCTGTGT
CAAATAATGC GTTACTTTGG CCGGGTCTTG 151 TTCTTTGTAA GTGGTGGTCT
TTTTTTGCGC GTTATCCCCA TCTGTTTGAG 201 TGCATAGCAA ATGGTGGCTG
CCGTACAATC AAAATGTTTG GCGATTTCAT 251 GCAGATAGGC ATCCTGGTGT
TGCCCAACAT ATTGAGCCGG TTTTTGCCTA 301 TCCGATTTGA CGGCATTTAG
ACCGGTAACT TGA
This corresponds to the amino acid sequence <SEQ ID 498; ORF
129.a>:
TABLE-US-00691 a129.pep (partial) 1 YLRFHYLPFQ AAGIGTEQVA
VKSCFIQINT LVVGKFGQLC QIMRYFGRVL 51 FFVSGGLFLR VIPICLSA*Q
MVAAVQSKCL AISCR*ASWC CPTY*AGFCL 101 SDLTAFRPVT * m129/a129 98.2%
identity in 110 aa overlap 10 20 30 40 50 60 m129.pep
YLRFHYLPFQAAGIGTEQVAVKSCFIQINTLVVGKFGRLCQIMRYFGRVLFFVSGGLFLR
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| a129
YLRFHYLPFQAAGIGTEQVAVKSCFIQINTLVVGKFGQLCQIMRYFGRVLFFVSGGLFLR 10 20
30 40 50 60 70 80 90 100 110 m129.pep
VIPICLSAXQMVAAVQSKCLAISCRXASGCCPTYXAGFCLSDLTAFRPVTX
|||||||||||||||||||||||||||| |||||||||||||||||||||| a129
VIPICLSAXQMVAAVQSKCLAISCRXASWCCPTYXAGFCLSDLTAFRPVTX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 499>:
TABLE-US-00692 g130.seq 1 ATGAAACAAC TCCGCGACAA CAAAGCCCAA
GGCTCTGCAC TGTTTACCCT 51 TGTGAGCGGT ATCGTTATTG TTATTGCAGT
CCTTTATTTC CTGATTAAGC 101 TGGCGGGCAG TGGATCGTTC GGCGATGTCG
ATGCCACTAC GGAAGCGGCA 151 ACGCAGACCC GCATCCAGCC TGTCGGACAA
TTGACGATGG GTGACGGCAT 201 CCCCGTCGGC GAACGCCAAG GCGAACAGAT
TTTCGGCAAA ATCTGTATCC 251 AATGCCACGC GGCGGACAGC AATGTGCCGA
ACGCTCCGAA ACTGGAACAC 301 AACGGCGACT GGGCGCCGCG TATCGCGCAA
GGCTTCGATA CCTTGTTCCA 351 ACACGCGCTG AACGGCTTTA ACGCCATGCC
TGCCAAAGGC GGTGCGGCAG 401 ACCTGACCGA TCAGGAACTC AAACGGGCGA
TTACCTACAT GGCGAATAAA 451 AGCGGCGGTT CTTTCCCGAA TCCTGATGAG
GCTGCGCCTG CCGACAATGC 501 CGCTTCAGGA ACAGCTTCTG CTCCTGCCGA
TAGTGCAGCT CCGGCAGAAG 551 CGAAGGCAGA AGACAAGGGT GCGGCAGCCC
CTGCGGTCGG CGTTGACGGT 601 AAAAAAGTCT TCGAAGCAAC CTGTCAGGTG
TGCCACGGCG GTTCGATTCC 651 CGGTATTCCC GGCATAGGCA AAAAAGACGA
TTGGGCACCG CGTATCAAAA 701 AAGGCAAAGA AACCTTGCAC AAACATGCCC
TTGAAGGCTT TAACGCGATG 751 CCGGCCAAAG GCGGCAATGC AGGTTTGAGC
GATGACGAAG TCAAAGCGGC 801 TGTTGACTAT ATGGCAAACC AATCCGGTGC
AAAATTCTAA
This corresponds to the amino acid sequence <SEQ ID 500; ORF
130.ng>:
TABLE-US-00693 g130.pep 1 MKQLRDNKAQ GSALFTLVSG IVIVIAVLYF
LIKLAGSGSF GDVDATTEAA 51 TQTRIQPVGQ LTMGDGIPVG ERQGEQIFGK
ICIQCHAADS NVPNAPKLEH 101 NGDWAPRIAQ GFDTLFQHAL NGFNAMPAKG
GAADLTDQEL KRAITYMANK 151 SGGSFPNPDE AAPADNAASG TASAPADSAA
PAEAKAEDKG AAAPAVGVDG 201 KKVFEATCQV CHGGSIPGIP GIGKKDDWAP
RIKKGKETLH KHALEGFNAM 251 PAKGGNAGLS DDEVKAAVDY MANQSGAKF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 501>:
TABLE-US-00694 m130.seq (partial) 1 ..GGCGAACAGA TTTTCGGCAA
AATCTGTATC CAATGCCACG CGGCGGACAG 51 CAATGTGCCG AACGCTCCGA
AACTGGAACA CAACGGCGAT TrGGCACCGC 101 GTATCGgCAA GGCTTCGATA
CCTTGTTCCA ACACGCGCTG AACGGCTTTA 151 ACGCCATGCC TGCAAAAGGC
GGTGCGGCAG ACCTGACCGA TCAGGAACTT 201 AAACGGGCGA TTACTTACAT
GGCGAACAAA AGCGGCGGTT CTTTCCCGAA 251 TCCTGATGAG GCTGCGCCTG
CCGACAATGC CGCTTCAGGA ACAGCTTCTG 301 CTCCTGCCGA TAGTGCAGCT
CCGGCAGAAG CGAAGGCAGA AGACAAGGGT 351 GCGGCAcCCC TGCGGTCGGC
GTTGACGGTA AAAAAGTCTT CGAAGCAACC 401 TGTCAGGTGT GCCACGGCGG
TTCGATTCCC GGTATTCCCG GCATAGGCAA 451 AAAAGACGAT TGGGCACCGC
GTATCAAAAA AGGCAAAGAA ACCTTGCACA 501 AACACGCCCT TGAAGGCTTT
AACGCGATGC CTGCCAAArG CGgCAATGCA 551 GGTTTGAGCG ATGACGAAgT
CAAAGCGGCT GTTGACTATA TGGCAAACCA 601 ATCCGGTGCA AAATTCTAA
This corresponds to the amino acid sequence <SEQ ID 502; ORF
130>:
TABLE-US-00695 m130.pep (partial) 1 ..GEQIFGKICI QCHAADSNVP
NAPKLEHNGD XAPRIQGFDT LFQHALNGFN 51 AMPAKGGAAD LTDQELKRAI
TYMANKSGGS FPNPDEAAPA DNAASGTASA 101 PADSAAPAEA KAEDKGAAPA
VGVDGKKVFE ATCQVCHGGS IPGIPGIGKK 151 DDWAPRIKKG KETLHKHALE
GFNAMPAKXG NAGLSDDEVK AAVDYMANQS 201 GAKF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 130
shows 98.1% identity over a 206 aa overlap with a predicted ORF
(ORF 130.ng) from N. gonorrhoeae:
TABLE-US-00696 m130/g130 10 20 30 m130.pep
GEQIFGKICIQCHAADSNVPNAPKLEHNGD |||||||||||||||||||||||||||||| g130
DATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNGD 50 60
70 80 90 100 40 50 60 70 80 89 m130.pep
XAPRI-QGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDEAAP ||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| g130
WAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDEAAP 110
120 130 140 150 160 90 100 110 120 130 140 m130.pep
ADNAASGTASAPADSAAPAEAKAEDKGAA-PAVGVDGKKVFEATCQVCHGGSIPGIPGIG
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| g130
ADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPGIPGIG 170
180 190 200 210 220 150 160 170 180 190 200 m130.pep
KKDDWAPRIKKGKETLHKHALEGFNAMPAKXGNAGLSDDEVKAAVDYMANQSGAKFX
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| g130
KKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSGAKFX 230 240
250 260 270 280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 503>:
TABLE-US-00697 a130.seq 1 ATGAAACAAC TCCGCGACAA CAAAGCCCAA
GGCTCTGCAC TGTTTACCCT 51 TGTGAGCGGT ATCGTTATTG TTATTGCAGT
CCTTTATTTC CTGATTAAGC 101 TGGCGGGCAG CGGCTCGTTC GGCGATGTCG
ATGCCACTAC GGAAGCAGCA 151 ACGCAGACCC GTATCCAGCC TGTCGGACAA
TTGACGATGG GCGACGGCAT 201 CCCCGTCGGC GAACGCCAAG GCGAACAGAT
TTTCGGCAAA ATCTGTATCC 251 AATGCCACGC GGCGGACAGC AATGTGCCGA
ACGCTCCGAA ACTGGAACAC 301 AACGGCGATT GGGCGCCGCG TATCGCGCAA
GGCTTCGATA CCTTGTTCCA 351 ACACGCGCTG AACGGCTTTA ACGCCATGCC
TGCCAAAGGC GGTGCGGTAG 401 ACCTGACCGA TCAGGAACTC AAACGGGCGA
TTACTTACAT GGCGAACAAA 451 AGCGGCGGTT CTTTCCCGAA TCCTGATGAG
GCTGCGCCTG CCGACAATGC 501 CGCTTCAGGA ACAGCTTCTG CTCCTGCCGA
TAGTGCAGCT CCGGCAGAAG 551 CGAAGGCAGA AGACAAGGGT GCGGCAGCCC
CTGCGGTCGG CGTTGACGGT 601 AAAAAAGTCT TCGAAGCAAC CTGTCAGGTG
TGCCACGGCG GTTCGATTCC 651 CGGTATTCCC GGCATAGGCA AAAAAGACGA
TTGGGCACCG CGTATCAAAA 701 AAGGCAAAGA AACCTTGCAC AAACACGCCC
TTGAAGGCTT TAACGCGATG 751 CCTGCCAAAG GCGGCAATGC AGGTTTGAGC
GATGACGAAG TCAAAGCGGC 801 TGTTGACTAT ATGGCAAACC AATCCGGTGC
AAAATTCTAA
This corresponds to the amino acid sequence <SEQ ID 504; ORF
130.a>:
TABLE-US-00698 a130.pep 1 MKQLRDNKAQ GSALFTLVSG IVIVIAVLYF
LIKLAGSGSF GDVDATTEAA 51 TQTRIQPVGQ LTMGDGIPVG ERQGEQIFGK
ICIQCHAADS NVPNAPKLEH 101 NGDWAPRIAQ GFDTLFQHAL NGFNAMPAKG
GAVDLTDQEL KRAITYMANK 151 SGGSFPNPDE AAPADNAASG TASAPADSAA
PAEAKAEDKG AAAPAVGVDG 201 KKVFEATCQV CHGGSIPGIP GIGKKDDWAP
RIKKGKETLH KHALEGFNAM 251 PAKGGNAGLS DDEVKAAVDY MANQSGAKF*
m130/a130 97.6% identity in 206 aa overlap 10 20 30 m130.pep
GEQIFGKICIQCHAADSNVPNAPKLEHNGD |||||||||||||||||||||||||||||| a130
DATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNGD 50 60
70 80 90 100 40 50 60 70 80 89 m130.pep
XAPRI-QGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDEAAP ||||
|||||||||||||||||||||||:|||||||||||||||||||||||||||||| a130
WAPRIAQGFDTLFQHALNGFNAMPAKGGAVDLTDQELKRAITYMANKSGGSFPNPDEAAP 110
120 130 140 150 160 90 100 110 120 130 140 m130.pep
ADNAASGTASAPADSAAPAEAKAEDKGAA-PAVGVDGKKVFEATCQVCHGGSIPGIPGIG
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| a130
ADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPGIPGIG 170
180 190 200 210 220 150 160 170 180 190 200 m130.pep
KKDDWAPRIKKGKETLHKHALEGFNAMPAKXGNAGLSDDEVKAAVDYMANQSGAKFX
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| a130
KKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSGAKFX 230 240
250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 505>:
TABLE-US-00699 g132.seq 1 ATGGAAGCCT TCAAAACCCT AATTTGGATT
ATTAATATTA TTTCCGCTTT 51 GGCCGTCATC GTGTTAGTAT TGCTCCAACA
CGGCAAAGGC GCGGATGCCG 101 GCGCGACCTT CGGATCGGGA AGCGGCAGCG
CGCAAGGCGT ATTCGGCTCT 151 GCCGGCAACG CCAACTTcct CAgccGCTCG
AccGccGTTG CAGCAACAtt 201 tttcttTGca acctgcAtgg gctatggTgt
atattcacac CCACACGACA 251 AAACACGGTT TGGACTtcag caacataCGA
CAGACTCAGC AagcACCCAA 301 ACCcgtAAGC AATACCGAAC CTTCTGCCCC
TGTTCCTCAG CAGCAGAAAT 351 AACagtTTTT CAAATgccga caTGgtga
This corresponds to the amino acid sequence <SEQ ID 506; ORF
132.ng>:
TABLE-US-00700 g132.pep 1 MEAFKTLIWI INIISALAVI VLVLLQHGKG
ADAGATFGSG SGSAQGVFGS 51 AGNANFLSRS TAVAATFFFA TCMGYGVYSH
PHDKTRFGLQ QHTTDSASTQ 101 TRKQYRTFCP CSSAAEITVF QMPTW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 507>:
TABLE-US-00701 m132.seq (partial) 1 ATGGAACCCT TCAAAACCTT
AATTTGGATT GTTAATTTAA TTTCCGCTTT 51 GGCCGTCTTC GTGTTAGTAT
TGCTCCAACA CGGCAAAGGC GCGGATGCCG 101 GCGCGACTTT CGGA...
This corresponds to the amino acid sequence <SEQ ID 508; ORF
132>:
TABLE-US-00702 m132.pep (partial) 1 MEPFKTLIWI VNLISALAVF
VLVLLQHGKG ADAGATFG...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 132
shows 89.5% identity over a 38 aa overlap with a predicted ORF (ORF
132.ng) from N. gonorrhoeae:
TABLE-US-00703 m132/g132 10 20 30 m132.pep
MEPFKTLIWIVNLISALAVFVLVLLQHGKGADAGATFG ||
|||||||:|:||||||:|||||||||||||||||| g132
MEAFKTLIWIINIISALAVIVLVLLQHGKGADAGATFGSGSGSAQGVFGSAGNANFLSRS 10 20
30 40 50 60
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 509>:
TABLE-US-00704 a132.seq 1 ATGGAAGCCT TCAAAACCCT AATTTGGATT
GTTAATATAA TTTCCGCTTT 51 GGCCGTCATC GTGTTAGTAT TGCTCCAACA
CGGCAAAGGC GCGGATGCCG 101 GCGCGACTTT CGGATCGGGA AGCGGCAGCG
CGCAAGGCGT ATTCGGCTCT 151 GCCGGCAACG CTAACTTCCT CAGCCGCTCG
ACCGCCGTTG CAGCAACATT 201 TTTCTTTGCA ACCTGCATGg GCTATGGTGT
ATATTCACAC CCACACGACA 251 AAACACGGTT TGGACTTCAG CAACGTACAA
CAAACTCAGC AAGCACCCAA 301 ACCCGTAAGC AATACCGAAC CTTCTGCCCC
TGTTCCTCAG CAGCAGAAAT 351 AACAGTTTTT CAAATGCCGA CATGGTGA
This corresponds to the amino acid sequence <SEQ ID 510; ORF
132.a>:
TABLE-US-00705 a132.pep 1 MEAFKTLIWI VNIISALAVI VLVLLQHGKG
ADAGATFGSG SGSAQGVFGS 51 AGNANFLSRS TAVAATFFFA TCMGYGVYSH
PHDKTRFGLQ QRTTNSASTQ 101 TRKQYRTFCP CSSAAEITVF QMPTW* m132/a132
92.1% identity in 38 aa overlap 10 20 30 m132.pep
MEPFKTLIWIVNLISALAVFVLVLLQHGKGADAGATFG ||
|||||||||:||||||:|||||||||||||||||| a132
MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSAQGVFGSAGNANFLSRS 10 20
30 40 50 60
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 511>:
TABLE-US-00706 g134.seq 1 ATGTCCCAAG AAATCCTCGA CCAAGTGCGC
CGCCGCCGCA CGTTTGCCAT 51 CATCTCCCAC CCCGATGCGG GTAAAACCAC
GCTGACCGAA AAACTGCTGC 101 TGTTTTCGGG CGCGATTCAA AGCGCAGGCA
CGGTGAAAGG TAAGAAAACC 151 GGCAAATTCG CCACCTCCGA CTGGATGGAC
ATCGAGAAGC AGCGCGGCAT 201 TTCCGTGGCA TCAAGCGTGA TGCAGTTCGA
CTACAAAGAC CACACCGTCA 251 ACCTCTTGGA CACGCCGGGA CACCAAGACT
TCTCCGAAGA CACCTACCGC 301 GTTTTAACCG CAGTGGACAG CGCCTTGATG
GTCATCGACG CGGCAAAAGG 351 CGTGGAAGCG CAAACCATCA AACTCTTGAA
CGTCTGCCGC CTGCGCGATA 401 CGCCGATTGT TACCTTCATG AACAAATACG
ACCGCGAAGT GCGCGATTCT 451 TTGGAACTCT TGGACGAAGT GGAAGACATC
CTGCAAATCC GCTGCGCGCC 501 CGTTACCTGG CCGATCGGTA TGGGCAAAAA
CTTCAAGGGC GTGTACCACA 551 TCCTGAACGA CGAAATCTAT CTCTTTGAAG
CGGGCGGCGA ACGCCTGCCG 601 CACGAGTTCG ACATCATCAA AGGCATAAAC
AATCCCGAAT TGGAACAACG 651 CTTTCCGTTG GAAATCCAGC AGTTGCGCGA
CGAAATCGAA TTGGTGCAGG 701 CGGCTTCCAA CGAATTTAAT CTCGacgaAT
TTCTCGccgG CGAACTCACG 751 CCAGTGTTCT TCGGCTCTGC GATTAACAAC
TTCGGCATTC AGGAAATCCT 801 CAATTCATTG ATTGACTGGG CACCCGCACC
GAAACCGCGC GACGCGACCA 851 TGCGCATGGT CGGGCCGGAC GAGCCGAAAT
TTTCCGGATT TATCTTTAAA 901 ATCCAAGCCA ATATGGACCC GAAACACCGC
GACCGTATCG CCTTCTTGCG 951 CGTCTGCTCC GGTAAATTCG AGCGCGGCAT
GAAGATGAAA CACCTGCGTA 1001 TCAACCGCGA AATCGCCGCC TCCAGCGTAG
TAACCTTCAT GTCGCACGAC 1051 CGCGAACTGG CGGAAGAAGC CTACGCCGGC
GACATCATCG GCATCCCGAA 1101 CCACGGCAAC ATCCAAATCG GCGACAGCTT
CTCCGAAGGC GAACAACTGG 1151 CGTTTACCGG CATCCCATTC TTCGCGCCCG
AACTGTTCCG CAGCGTCCGC 1201 ATCAAAAACC CGCTGAAAAT CAAACAACTG
CAAAAAGGTT TGCAACAACT 1251 CGGCGAAGAA GGTGCGGTTC AAGTATTCAA
ACCGATGAGC GGCGCGGATT 1301 TGATTTTGGG TGCGGTCGGC GTGTTGCAGT
TTGAAGTCGT AACCTCACGC 1351 CTCGCCAACG AATACGGCGT GGAAGCCGTG
TTCGACAGCG CATCCATCTG 1401 GTCGGCGCGC TGGGTATCGT GCGACGACAA
GAAAAAACTG GCGGAATTTG 1451 AAAAAGCCAA CGCAGGCAAC CTCGCCATCG
ACGCAGGCGG CAACCTCGCC 1501 TACCTCGCCC CCAACCGCGT GAATTTGGGG
TTGACGCAAG AACGCTGGCC 1551 GGACATCGTG TTCCACGAAA CGCGCGAACA
TTCGGTCAAA CTCTAA
This corresponds to the amino acid sequence <SEQ ID 512; ORF
134.ng>:
TABLE-US-00707 g134.pep 1 MSQEILDQVR RRRTFAIISH PDAGKTTLTE
KLLLFSGAIQ SAGTVKGKKT 51 GKFATSDWMD IEKQRGISVA SSVMQFDYKD
HTVNLLDTPG HQDFSEDTYR 101 VLTAVDSALM VIDAAKGVEA QTIKLLNVCR
LRDTPIVTFM NKYDREVRDS 151 LELLDEVEDI LQIRCAPVTW PIGMGKNFKG
VYHILNDEIY LFEAGGERLP 201 HEFDIIKGIN NPELEQRFPL EIQQLRDEIE
LVQAASNEFN LDEFLAGELT 251 PVFFGSAINN FGIQEILNSL IDWAPAPKPR
DATMRMVGPD EPKFSGFIFK 301 IQANMDPKHR DRIAFLRVCS GKFERGMKMK
HLRINREIAA SSVVTFMSHD 351 RELAEEAYAG DIIGIPNHGN IQIGDSFSEG
EQLAFTGIPF FAPELFRSVR 401 IKNPLKIKQL QKGLQQLGEE GAVQVFKPMS
GADLILGAVG VLQFEVVTSR 451 LANEYGVEAV FDSASIWSAR WVSCDDKKKL
AEFEKANAGN LAIDAGGNLA 501 YLAPNRVNLG LTQERWPDIV FHETREHSVK L*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 513>:
TABLE-US-00708 m134.seq 1 ATGTCCCAAG AAATCCTCGA CCAAGTGCGC
CGCCGCCGCA CGTTTGCCAT 51 CATCTCCCAC CCTGACGCAG GTAAAACCAC
GTTGACTGAA AAACTCTTGC 101 TGTTTTCGGG CGCGATTCAG AGCGCGGGTA
CGGTAAAAGG CAAGAAAACC 151 GGCAAATTCG CCACTTCCGA CTGGATGGAA
ATCGAGAAGC AGCGCGGCAT 201 TTCCGTGGCA TCAAGTGTGA TGCAGTTCGA
TTACAAAGAC CACACCGTCA 251 ACCTCTTGGA CACGCCGGGA CACCAAGACT
TCTCCGAAGA CACCTACCGC 301 GTTTTAACCG CCGTGGACAG CGCATTAATG
GTCATCGACG CGGCAAAAGG 351 CGTGGAAGCG CAAACCATCA AGCTCTTAAA
CGTCTGCCGC CTGCGCGATA 401 CACCGATTGT TACGTTTATG AACAAATACG
ACCGCGAAGT GCGCGATTCC 451 CTGGAACTTT TGGACGAAGT GGAAAACATT
TTAAAAATCC GCTGCGCGCC 501 CGTTACCTGG CCGATCGGTA TGGGCAAAAA
CTTCAAGGGC GTGTACCACA 551 TCCTGAACGA TGAAATTTAT CTCTTTGAAG
CTGGCGGCGA ACGCCTGCCG 601 CACGAGTTCG ACATCATCAA AGGCATCGAT
AATCCTGAAT TGGAACAACG 651 CTTTCCGTTG GAAATCCAGC AGTTGCGCGA
CGAAATCGAA TTGGTGCAGG 701 CGGCTTCCAA CGAGTTTAAT CTCGACGAAT
TCCTCGCCGG CGAACTCACG 751 CCCGTATTCT TCGGCTCTGC GATTAACAAC
TTCGGTATTC AGGAAATCCT 801 CAATTCATTG ATTGACTGGG CGCCCGCGCC
GAAACCGCGC GACGCGACCG 851 TACGTATGGT CGAGCCGGAC GAGCCGAAGT
TTTCCGGATT TATCTTCAAA 901 ATCCAAGCCA ATATGGACCC GAAACACCGC
GACCGTATTG CCTTCTTGCG 951 CGTCTGCTCC GGCAAATTCG AGCGCGGCAT
GAAGATGAAA CACCTGCGTA 1001 TCAACCGCGA AATCGCCGCC TCCAGCGTGG
TTACCTTCAT GTCGCACGAC 1051 CGCGAGCTGG TTGAAGAAGC CTACGCCGGC
GACATTATCG GCATCCCGAA 1101 CCACGGCAAC ATCCAAATCG GCGACAGCTT
CTCCGAAGGC GAACAACTGG 1151 CGTTCACCGG CATCCCATTC TTCGCACCCG
AACTGTTCCG CAGCGTACGC 1201 ATCAAAAACC CGCTGAAAAT CAAACAACTG
CAAAAAGGCT TGCAACAGCT 1251 CGGCGAAGAA GGCGCGGTGC AGGTGTTCAA
ACCGATGAGC GGCGCGGATT 1301 TGATTTTGGG CGCGGTCGGC GTGTTGCAGT
TTGAAGTCGT TACCTCGCGC 1351 CTCGCCAACG AATACGGCGT AGAAGCCGTG
TTCGACAGCG CATCCATCTG 1401 GTCGGCGCGC TGGGTATCGT GCGACGACAA
GAAAAAACTG GCTGAATTTG 1451 AAAAAGCCAA CGCGGGCAAC CTCGCCATCG
ACGCAGGCGG CAACCTCGCC 1501 TACCTCGCCC CCAACCGCGT GAATTTGGGA
CTCACGCAAG AACGTTGGCC 1551 GGACATCGTG TTCCACGAAA CACGCGAACA
TTCGGTCAAA CTGTAA
This corresponds to the amino acid sequence <SEQ ID 514; ORF
134>:
TABLE-US-00709 m134.pep 1 MSQEILDQVR RRRTFAIISH PDAGKTTLTE
KLLLFSGAIQ SAGTVKGKKT 51 GKFATSDWME IEKQRGISVA SSVMQFDYKD
HTVNLLDTPG HQDFSEDTYR 101 VLTAVDSALM VIDAAKGVEA QTIKLLNVCR
LRDTPIVTFM NKYDREVRDS 151 LELLDEVENI LKIRCAPVTW PIGMGKNFKG
VYHILNDEIY LFEAGGERLP 201 HEFDIIKGID NPELEQRFPL EIQQLRDEIE
LVQAASNEFN LDEFLAGELT 251 PVFFGSAINN FGIQEILNSL IDWAPAPKPR
DATVRMVEPD EPKFSGFIFK 301 IQANMDPKHR DRIAFLRVCS GKFERGMKMK
HLRINREIAA SSVVTFMSHD 351 RELVEEAYAG DIIGIPNHGN IQIGDSFSEG
EQLAFTGIPF FAPELFRSVR 401 IKNPLKIKQL QKGLQQLGEE GAVQVFKPMS
GADLILGAVG VLQFEVVTSR 451 LANEYGVEAV FDSASIWSAR WVSCDDKKKL
AEFEKANAGN LAIDAGGNLA 501 YLAPNRVNLG LTQERWPDIV FHETREHSVK L*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 134
shows 98.7% identity over a 531 aa overlap with a predicted ORF
(ORF 134.ng) from N. gonorrhoeae:
TABLE-US-00710 m134/g134 10 20 30 40 50 60 m134.pep
MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWME
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g134
MSQEILDQVRRRRTFAIISHPDAGKTILTEKLLLFSGAIQSAGTVKGKKIGKFATSDWMD 10 20
30 40 50 60 70 80 90 100 110 120 m134.pep
IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g134
IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA 70 80
90 100 110 120 130 140 150 160 170 180 m134.pep
QTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILKIRCAPVTWPIGMGKNFKG
||||||||||||||||||||||||||||||||||||||:||:|||||||||||||||||| g134
QTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVEDILQIRCAPVTWPIGMGKNFKG 130
140 150 160 170 180 190 200 210 220 230 240 m134.pep
VYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g134
VYHILNDEIYLFEAGGERLPHEFDIIKGINNPELEQRFPLEIQQLRDEIELVQAASNEFN 190
200 210 220 230 240 250 260 270 280 290 300 m134.pep
LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEPKFSGFIFK
|||||||||||||||||||||||||||||||||||||||||||:||| |||||||||||| g134
LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATMRMVGPDEPKFSGFIFK 250
260 270 280 290 300 310 320 330 340 350 360 m134.pep
IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| g134
IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELAEEAYAG 310
320 330 340 350 360 370 380 390 400 410 420 m134.pep
DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g134
DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE 370
380 390 400 410 420 430 440 450 460 470 480 m134.pep
GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCDDKKKL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g134
GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCDDKKKL 430
440 450 460 470 480 490 500 510 520 530 m134.pep
AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKLX
|||||||||||||||||||||||||||||||||||||||||||||||||||| g134
AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKLX 490 500 510
520 530
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 515>:
TABLE-US-00711 a134.seq 1 ATGTCCCAAG AAATCCTCGA CCAAGTGCGC
CGCCGCCGCA CGTTTGCCAT 51 CATCTCCCAC CCTGACGCAG GTAAAACCAC
GTTGACTGAA AAACTCTTGC 101 TGTTTTCAGG TGCGATTCAA AGCGCGGGTA
CGGTAAAAGG CAAGAAAACC 151 GGCAAATTCG CCACCTCCGA CTGGATGGAC
ATCGAGAAGC AGCGCGGCAT 201 TTCCGTGGCA TCAAGCGTGA TGCAGTTCGA
CTATAAAGAC CACACCGTCA 251 ACCTTTTGGA CACGCCGGGA CACCAAGACT
TCTCCGAAGA CACCTACCGC 301 GTTTTGACCG CCGTCGATAG TGCCTTGATG
GTCATCGACG CGGCAAAAGG 351 CGTGGAAGCG CAAACCATCA AACTCTTGAA
CGTCTGCCGC CTGCGCAATA 401 CGCCGATTGT TACGTTCATG AACAAATACG
ACCGCGAAGT GCGCGATTCC 451 CTGGAATTGC TGGACGAAGT GGAAAACATC
CTGCAAATCC GCTGCGCGCC 501 CGTAACCTGG CCGATCGGCA TGGGCAAAAA
CTTCAAAGGC GTGTACCACA 551 TCCTGAACGA CGAAATCTAT CTCTTTGAAG
CGGGCGGCGA ACGCTTGCCG 601 CACGAGTTCG ACATCATCAA AGGCATCGAT
AATCCCGAAT TGGAACAACG 651 CTTTCCGTTA GAAATACAGC AGTTGCGCGA
CGAAATCGAA TTGGTGCAGG 701 CGGCTTCCAA CGAGTTCAAT CTCGACGAAT
TCCTCGCCGG CGAACTCACG 751 CCCGTATTCT TCGGCTCTGC GATTAACAAC
TTCGGTATTC AGGAAATCCT 801 CAATTCATTG ATTGAATGGG CGCCCGCGCC
GAAACCACGC GATGCGACCG 851 TGCGTATGGT CGAGCCGGAC GAGCCGAAGT
TTTCCGGATT TATCTTCAAA 901 ATCCAAGCCA ATATGGACCC GAAACACCGC
GACCGTATTG CCTTCTTGCG 951 CGTCTGCTCC GGCAAATTCG AGCGCGGCAT
GAAAATGAAA CACCTGCGTA 1001 TCAACCGCGA AATCGCCGCC TCCAGCGTGG
TAACCTTCAT GTCCCACGAC 1051 CGCGAGCTGG TTGAAGAAGC CTACGCCGGC
GACATTATCG GTATCCCAAA 1101 CCACGGCAAC ATCCAAATCG GCGACAGCTT
CTCCGAAGGC GAACAACTGA 1151 CGTTTACCGG CATCCCATTC TTCGCGCCCG
AACTGTTCCG CAGCGTTCGC 1201 ATCAAAAACC CGCTGAAAAT CAAGCAACTG
CAAAAAGGTT TGCAACAGCT 1251 TGGCGAAGAA GGTGCGGTGC AGGTGTTCAA
ACCAATGAGC GGCGCGGATT 1301 TGATTTTGGG CGCGGTCGGC GTGTTGCAGT
TTGAAGTCGT TACCTCGCGC 1351 CTTGCCAACG AATACGGCGT GGAAGCCGTG
TTCGACAACG CATCCATCTG 1401 GTCGGCGCGC TGGGTATCGT GCGACGACAA
GAAAAAACTG GCGGAATTTG 1451 AAAAAGCCAA CGCGGGCAAC CTCGCCATCG
ACGCGGGCGG CAACCTCGCC 1501 TACCTCGCCC CTAACCGCGT GAATCTGGGA
CTCACGCAAG AACGCTGGCC 1551 GGACATCGTG TTCCACGAAA CGCGCGAGCA
TTCGGTCAAA CTTTAA
This corresponds to the amino acid sequence <SEQ ID 516; ORF
134.a>:
TABLE-US-00712 a134.pep 1 MSQEILDQVR RRRTFAIISH PDAGKTTLTE
KLLLFSGAIQ SAGTVKGKKT 51 GKFATSDWMD IEKQRGISVA SSVMQFDYKD
HTVNLLDTPG HQDFSEDTYR 101 VLTAVDSALM VIDAAKGVEA QTIKLLNVCR
LRNTPIVTFM NKYDREVRDS 151 LELLDEVENI LQIRCAPVTW PIGMGKNFKG
VYHILNDEIY LFEAGGERLP 201 HEFDIIKGID NPELEQRFPL EIQQLRDEIE
LVQAASNEFN LDEFLAGELT 251 PVFFGSAINN FGIQEILNSL IEWAPAPKPR
DATVRMVEPD EPKFSGFIFK 301 IQANMDPKHR DRIAFLRVCS GKFERGMKMK
HLRINREIAA SSVVTFMSHD 351 RELVEEAYAG DIIGIPNHGN IQIGDSFSEG
EQLTFTGIPF FAPELFRSVR 401 IKNPLKIKQL QKGLQQLGEE GAVQVFKPMS
GADLILGAVG VLQFEVVTSR 451 LANEYGVEAV FDNASIWSAR WVSCDDKKKL
AEFEKANAGN LAIDAGGNLA 501 YLAPNRVNLG LTQERWPDIV FHETREHSVK L*
m134/a134 98.9% identity in 531 aa overlap 10 20 30 40 50 60
m134.pep
MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWME
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a134
MSQEILDQVRRRRTFAIISHPDAGKTILTEKLLLFSGAIQSAGTVKGKKIGKFATSDWMD 10 20
30 40 50 60 70 80 90 100 110 120 m134.pep
IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a134
IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA 70 80
90 100 110 120 130 140 150 160 170 180 m134.pep
QTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILKIRCAPVTWPIGMGKNFKG
||||||||||||:||||||||||||||||||||||||||||:|||||||||||||||||| a134
QTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENILQIRCAPVTWPIGMGKNFKG 130
140 150 160 170 180 190 200 210 220 230 240 m134.pep
VYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a134
VYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN 190
200 210 220 230 240 250 260 270 280 290 300 m134.pep
LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEPKFSGFIFK
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| a134
LDEFLAGELTPVFFGSAINNFGIQEILNSLIEWAPAPKPRDATVRMVEPDEPKFSGFIFK 250
260 270 280 290 300 310 320 330 340 350 360 m134.pep
IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a134
IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG 310
320 330 340 350 360 370 380 390 400 410 420 m134.pep
DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| a134
DIIGIPNHGNIQIGDSFSEGEQLTFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE 370
380 390 400 410 420 430 440 450 460 470 480 m134.pep
GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCDDKKKL
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| a134
GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDNASIWSARWVSCDDKKKL 430
440 450 460 470 480 490 500 510 520 530 m134.pep
AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKLX
|||||||||||||||||||||||||||||||||||||||||||||||||||| a134
AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKLX 490 500 510
520 530
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 517>:
TABLE-US-00713 g135.seq 1 ATGAAATACA AAAGAATCGT ATTTAAAGTC
GGCACATCTT CGATTACCCG 51 TTCGGAcgGC AGCCTCTCGC GCGGCAAAAT
CCAAACCATC ACCCGCCAGC 101 TTGCCGCATT GCATCATGCG GGACACGAGC
TGGTCTTGGT GTCTTCCGGC 151 GCGGTTGCTG CAGGGTTCGG CGCGCTGGGT
TTCAAAAAAC GTCCGGTCAA 201 AATCGCCGAC AAACAGGCTT CCGCCGCCGT
CGGGCAGGGG CTGCTGATGG 251 AAGAATATAC GGCAAACCTG TCTTCAGACG
GCATCGTGTC CGCACAAATC 301 CTGCTCAGCC GTGCCGACTT TGCCGACAAA
CGCCGCTACC AAAATGCCGG 351 CGGCGCACTT TCCGTGCTGC TGCAACGCCG
CGCGATTCCC ATCATCAATG 401 AAAACGACAC GGTTTCGGTT GAGGAGTTGA
AAATCGGCGA CAACGACACA 451 TTGAGTGCGC AAGTGGCGGC GATGATACAG
GCAGACCTCT TGGTGCTGCT 501 GACCGACATA GACGGTCTTT ACACCGGCAA
CCCGAACAGC AATCCCGATG 551 CCGTACGGCT GGACAAAATC GAACACATCA
ACCATGAAAT CATCGAAATG 601 GCGGGCGGCT CGGGTTCGGC AAACGGCACG
GGCGGTATGC TGACCAAAAT 651 CAAAGCGGCA ACCATCGCCG CCGAATCCGG
CGTACCGGTG TATATCTGTT 701 CCTCACTCAA ACCCGATTCA TTGGCCGAAG
CCGCCGAACA TCAGGCGGAC 751 GGCTCGTTTT TCGTcccCcg tgCCAAAGGT
TTGCGGACAC AGAAGCAATG 801 GctggCGTTC TATTCcgaaa gcggGGgcag
cgttTAtgtg gacgaaagtg 851 cggaacacgc tTtgtccgaa caagggaaag
cctgCTGA
This corresponds to the amino acid sequence <SEQ ID 518; ORF
135.ng>:
TABLE-US-00714 g135.pep 1 MKYKRIVFKV GTSSITRSDG SLSRGKIQTI
TRQLAALHHA GHELVLVSSG 51 AVAAGFGALG FKKRPVKIAD KQASAAVGQG
LLMEEYTANL SSDGIVSAQI 101 LLSRADFADK RRYQNAGGAL SVLLQRRAIP
IINENDTVSV EELKIGDNDT 151 LSAQVAAMIQ ADLLVLLTDI DGLYTGNPNS
NPDAVRLDKI EHINHEIIEM 201 AGGSGSANGT GGMLTKIKAA TIAAESGVPV
YICSSLKPDS LAEAAEHQAD 251 GSFFVPRAKG LRTQKQWLAF YSESGGSVYV
DESAEHALSE QGKAC*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 519>:
TABLE-US-00715 m135.seq 1 ATGAAATACA AAAGAATCGT ATTTAAAGTC
GGCACATCTT CGATTACCCA 51 TTCGGACGGC AGTCTCTCGC GCGGCAAAAT
CCAAACCATC ACCTGCCAGC 101 TTGCCGCATT GCATCATGCG GGACACGAGC
TGGTCTTGGT GTCTTCCGGC 151 GCGGTTGCGG CAGGGTTCGG TGCGCTGGGT
TTCAAAAAAC GTCCGGTCAA 201 AATCGCCGAC AAACAGGCTT CCGCCGCCGT
CGGGCAGGGG CTGCTGATGG 251 AAGAATATAC GGCAAACCTG TCTTCAGACG
GCATCGTGTC CGCGCAAATC 301 CTGCTCAGCC GCGCCGACTT TGCCGACAAA
CGCCGCTACC AAAATGCCGG 351 CGGCGCACTT TCCGTGCTGC TGCAACGCCG
CGCCGTCCCC ATCATCAATG 401 AAAACGATAC GGTTTCGGTT GAGGAATTGA
AAATCGGCGA CAACGACACA 451 TTGAGTGCGC AAGTGGCGGC GATGATACAG
GCAGACCTCT TGGTGCTGCT 501 GACCGACATA GACGGTCTTT ACACGGGCAA
CCCGAACAGC AATCCCGATG 551 CCGTACGGCT GGACAAAATC GAACACATCA
ACCATGAAAT CATCGAAATG 601 GCGGGCGGCT CGGGTTCGGC AAACGGCACG
GGCGGTATGC TGACCAAAAT 651 CAAAGCGGCA ACCATCGCCG CCGAATCCGG
CGTACCGGTG TATATCTGTT 701 CCTCGCTCAA ACCCGATGCA CTTGCCGAAG
CTGCCGAACA TCAGGCGGAC 751 GGCTCGTTTT TCGTCCCCCG TGCCAAAGGT
TTGCGGACGC AGAAGCAATG 801 GCTGGCGTTC TATTCCGAAA GCCGGGGCAG
CGTTTATGTG GACGAAGGTG 851 CGGAACACGC TTTGTCCGAA CAGGGGAAAA
GCCTGCTGAT GTCGGGCATT 901 GCCGGAATCG AAGGGCATTT TTCCCGTATG
GACACCGTAA CCGTGTACAG 951 CAAGGCAACC AAACAGCCCC TGGGCAAAGG
GCGCGTCCTG TTCGGCTCTG 1001 CCGCCGCCGA AGACCTGCTC AAATCGCGTA
AGGCGAAAGG CGTGTTCATC 1051 CATCGGGACG ACTGGATTTC CATCACGCCC
GAAATACGCC TGCTTCTGAC 1101 CGAATTTTAG
This corresponds to the amino acid sequence <SEQ ID 520; ORF
135>:
TABLE-US-00716 m135.pep 1 MKYKRIVFKV GTSSITHSDG SLSRGKIQTI
TCQLAALHHA GHELVLVSSG 51 AVAAGFGALG FKKRPVKIAD KQASAAVGQG
LLMEEYTANL SSDGIVSAQI 101 LLSRADFADK RRYQNAGGAL SVLLQRRAVP
IINENDTVSV EELKIGDNDT 151 LSAQVAAMIQ ADLLVLLTDI DGLYTGNPNS
NPDAVRLDKI EHINHEIIEM 201 AGGSGSANGT GGMLTKIKAA TIAAESGVPV
YICSSLKPDA LAEAAEHQAD 251 GSFFVPRAKG LRTQKQWLAF YSESRGSVYV
DEGAEHALSE QGKSLLMSGI 301 AGIEGHFSRM DTVTVYSKAT KQPLGKGRVL
FGSAAAEDLL KSRKAKGVFI 351 HRDDWISITP EIRLLLTEF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 135
shows 97.6% identity over a 294 aa overlap with a predicted ORF
(ORF 135.ng) from N. gonorrhoeae:
TABLE-US-00717 m135/g135 10 20 30 40 50 60 m135.pep
MKYKRIVFKVGTSSITHSDGSLSRGKIQTITCQLAALHHAGHELVLVSSGAVAAGFGALG
||||||||||||||||:|||||||||||||| |||||||||||||||||||||||||||| g135
MKYKRIVFKVGTSSITRSDGSLSRGKIQTITRQLAALHHAGHELVLVSSGAVAAGFGALG 10 20
30 40 50 60 70 80 90 100 110 120 m135.pep
FKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g135
FKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGAL 70 80
90 100 110 120 130 140 150 160 170 180 m135.pep
SVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNS
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| g135
SVLLQRRAIPIINENDIVSVEELKIGDNDILSAQVAAMIQADLLVLLTDIDGLYTGNPNS 130
140 150 160 170 180 190 200 210 220 230 240 m135.pep
NPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g135
NPDAVRLDKIEHINHEIIEMAGGSGSANGIGGMLIKIKAATIAAESGVPVYICSSLKPDS 190
200 210 220 230 240 250 260 270 280 290 300 m135.pep
LAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRGSVYVDEGAEHALSEQGKSLLMSGI
|||||||||||||||||||||||||||||||||| |||||||:||||||||||: g135
LAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESGGSVYVDESAEHALSEQGKACX 250 260
270 280 290 310 320 330 340 350 360 m135.pep
AGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSAAAEDLLKSRKAKGVFIHRDDWISITP
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 521>:
TABLE-US-00718 a135.seq 1 ATGAAATACA AAAGAATCGT ATTTAAAGTC
GGCACATCTT CGATTACCCA 51 TTCGGACGGC AGTCTCTCGC GCGGCAAAAT
CCAAACCATC ACCCGCCAGC 101 TTGCCGCATT GCATCATGCG GGACACGAGC
TGGTCTTGGT GTCTTCCGGC 151 GCGGTTGCGG CAGGGTTCGG TGCGCTGGGT
TTCAAAAAAC GTCCGGTCAA 201 AATCGCCGAC AAACAGGCTT CCGCCGCCGT
CGGGCAGGGG CTGCTGATGG 251 AAGAATATAC GGCAAACCTG TCTTCAGACG
GCATCGTGTC CGCACAAATC 301 CTGCTCAGCC GCGCCGACTT TGCCGACAAA
CGCCGCTACC AAAATGCCGG 351 CGGCGCACTT TCCGTGCTGC TGCAACGCCG
CGCCGTCCCC ATCATCAATG 401 AAAACGATAC GGTTTCGGTT GAGGAATTGA
AAATCGGCGA CAACGACACA 451 TTGAGTGCGC AAGTGGCGGC GATGATACAG
GCAGACCTCT TGGTGCTGCT 501 GACCGACATA GACGGTCTTT ACACCGGCAA
CCCGAACAGC AATCCCGATG 551 CCGTACGGCT GGACAAAATC GAACACATCA
ACCATGAAAT CATCGAAATG 601 GCGGGCGGCT CGGGTTCGGC AAACGGCACA
GGCGGTATGC TGACTAAAAT 651 CAAAGCGGCG ACGATTGCGA CCGAGTCCGG
CGTACCGGTC TATATCTGTT 701 CCTCGCTCAA ACCCGATGCA CTTGCCGAAG
CGGCAGATAA TCAGGCGGAC 751 GGCTCGTTTT TCGTCCCCCG TGCCAAAGGT
TTGCGGACGC AGAAGCAATG 801 GCTGGCGTTC TATTCCGAAA GCAGGGGCGG
CGTTTATGTG GACGAAGGTG 851 CGGAACACGC TTTGTCCGAA CAGGGAAAAA
GCCTGCTGAT GTCGGGCATT 901 GCCGGAATCG AAGGGCATTT TTCCCGTATG
GACACCGTAA CCGTGTACAG 951 CAAGGCAACC AAACAGCCTT TGGGCAAAGG
GCGAGTCCTG TTCGGCTCTG 1001 CCGCCGCCGA AGACCTGCTC AAATTGCGTA
AGGCGAAAGG CGTGTTCATC 1051 CATCGGGACG ACTGGATTTC CATCACGCCC
GAAATACGCC TGCTTCTGAC 1101 CGAATTTTAG
This corresponds to the amino acid sequence <SEQ ID 522; ORF
135.a>:
TABLE-US-00719 a135.pep 1 MKYKRIVFKV GTSSITHSDG SLSRGKIQTI
TRQLAALHHA GHELVLVSSG 51 AVAAGFGALG FKKRPVKIAD KQASAAVGQG
LLMEEYTANL SSDGIVSAQI 101 LLSRADFADK RRYQNAGGAL SVLLQRRAVP
IINENDTVSV EELKIGDNDT 151 LSAQVAAMIQ ADLLVLLTDI DGLYTGNPNS
NPDAVRLDKI EHINHEIIEM 201 AGGSGSANGT GGMLTKIKAA TIATESGVPV
YICSSLKPDA LAEAADNQAD 251 GSFFVPRAKG LRTQKQWLAF YSESRGGVYV
DEGAEHALSE QGKSLLMSGI 301 AGIEGHFSRM DTVTVYSKAT KQPLGKGRVL
FGSAAAEDLL KLRKAKGVFI 351 HRDDWISITP EIRLLLTEF* m135/a135 98.4%
identity in 369 aa overlap 10 20 30 40 50 60 m135.pep
MKYKRIVFKVGTSSITHSDGSLSRGKIQTITCQLAALHHAGHELVLVSSGAVAAGFGALG
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| a135
MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHELVLVSSGAVAAGFGALG 10 20
30 40 50 60 70 80 90 100 110 120 m135.pep
FKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a135
FKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGAL 70 80
90 100 110 120 130 140 150 160 170 180 m135.pep
SVLLQRRAVPIINENDTVSV EELKIGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a135
SVLLQRRAVPIINENDIVSVEELKIGDNDILSAQVAAMIQADLLVLLTDIDGLYTGNPNS 130
140 150 160 170 180 190 200 210 220 230 240 m135.pep
NPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDA
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| a135
NPDAVRLDKIEHINHEIIEMAGGSGSANGIGGMLIKIKAATIATESGVPVYICSSLKPDA 190
200 210 220 230 240 250 260 270 280 290 300 m135.pep
LAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRGSVYVDEGAEHALSEQGKSLLMSGI
|||||::|||||||||||||||||||||||||||||:||||||||||||||||||||||| a135
LAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRGGVYVDEGAEHALSEQGKSLLMSGI 250
260 270 280 290 300 310 320 330 340 350 360 m135.pep
AGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSAAAEDLLKSRKAKGVFIHRDDWISITP
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| a135
AGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSAAAEDLLKLRKAKGVFIHRDDWISITP 310
320 330 340 350 360 370 m135.pep EIRLLLTEFX |||||||||| a135
EIRLLLTEFX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 523>:
TABLE-US-00720 g136.seq 1 ATGGAAATCC GGTTTCAGAC AGCATTTTTA
CGTTTGGTTC AGatgaAAAC 51 AAACGCTtca aTTCTtaccg caACACGCCT
TGTATTTCCT GccgCTGCCG 101 CACGGACAGG GATCGTTCCT GCCGgtTTTT
TCCCCTTCCC TGCGGACGGT 151 TTGCGGTTTG TTGATGACCG CCTGCCAGTA
GCGGTAGATG TCtgccagcg 201 cgTAAGGCag tTCGGAcgca agttccgcca
gctcgccttc ggTGAATTGC 251 AGgcggataa cgccgtttTC CTCTTCGTCg
taaatgccgc ccactgccat 301 cacgGGGTAA AACAGCTCTT CAAACGCTTC
ATCATCGGCG GCTTCAAACC 351 AATCGGTCGG CACAATGTCC AAACCGTAAA
GATAGGCGTT GCACCAAGTG 401 TAAAAATCGC TGCCGCCCTC GCCGTCGTCG
TAGAGCCACA AATCGGGCAG 451 CTTTTTATCC GACATCGCGG CGGTTGTTTC
CATCGCCATT GCCAAAACCA 501 GCCGTTCGAT TTCGGAACGT TCGGCGGCGG
TAAATTGCGA TTCGTCGCCC 551 AACACTTCGG GCAGCCAGTC GAGCGGTGCC
AATTTGTCCG GCCCGCTCAA 601 CAGCGCCGTC ATAAAACCTT GAACCTCGTC
GCAACGCATC GTGTTGCCTT 651 GTTCGCTTTT GGCATCCAAT AA
This corresponds to the amino acid sequence <SEQ ID 524; ORF
136.ng>:
TABLE-US-00721 g136.pep 1 MEIRFQTAFL RLVQMKTNAS ILTATRLVFP
AAAARTGIVP AGFFPFPADG 51 LRFVDDRLPV AVDVCQRVRQ FGRKFRQLAF
GELQADNAVF LFVVNAAHCH 101 HGVKQLFKRF IIGGFKPIGR HNVQTVKIGV
APSVKIAAAL AVVVEPQIGQ 151 LFIRHRGGCF HRHCQNQPFD FGTFGGGKLR
FVAQHFGQPV ERCQFVRPAQ 201 QRRHKTLNLV ATHRVALFAF GIQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 525>:
TABLE-US-00722 m136.seq 1 ATGGAAACAA ACGCTTCAAT TCTTACCGCA
ACACGCCTTG TATTTTCTGC 51 CGCTGCCGCA CGGACAGGGA TCGTTCCTGC
CTGTTTTTTC GCCTTCCCTG 101 CGGACGGTTT GCGGTTTGTT GATGACTGCC
TGCCAGTAGC GGTAGATATC 151 CGCCAATGCA TAAGGCAACT CGGATTCCAG
TTCCGCCAGC TCGCCTTCTG 201 TGAATTGCAG ACGGATAGCG CCGTTTTCCT
CTTCGTCGTA AATACCGCCC 251 AATGCCATGA TGGGATAAAA CAACTCTTCA
AACGCTTCAT CATCGACGGC 301 TTCAAACCAA TCGGTCGGCA CAATATCCAA
ACCGTAAAGA TAAGCATTGC 351 ACCATGTGTA AAAATCGCTG CCGCCGTCTT
CGTTTTCATA CAGCCACAAA 401 TCGGGCAGTT TTTTATCCGA CATCGCGGCG
GTTGTTTCCA TCGCCATTGC 451 CAAAACCAGC CGTTCGATTT CGGAACGTTC
GGCGGCGGTA AATTGCGATT 501 CGTCGCCCAA CACTTCGGGC AGCCAGTCGA
GCGGTGTCAA TTTGTCCGGC 551 CCGCTCAACA GCGCCGTCAT AAAACCTTGA
ACCTCGTCGC AACGCATCGT 601 GTTGCCTTGT TCGCTTTTGG CATCCAACAA
TTCGCTCAAC CGCCGTTTGG 651 ATGCTTCGGT AAATTTTCGG GAATCCATCA
TTTTCCTTTT CAAATGGGTT 701 TTGCGCCCTA TTATCGCCGC AATGCCGTCT GA
This corresponds to the amino acid sequence <SEQ ID 526; ORF
136>:
TABLE-US-00723 m136.pep 1 METNASILTA TRLVFSAAAA RTGIVPACFF
AFPADGLRFV DDCLPVAVDI 51 RQCIRQLGFQ FRQLAFCELQ TDSAVFLFVV
NTAQCHDGIK QLFKRFIIDG 101 FKPIGRHNIQ TVKISIAPCV KIAAAVFVFI
QPQIGQFFIR HRGGCFHRHC 151 QNQPFDFGTF GGGKLRFVAQ HFGQPVERCQ
FVRPAQQRRH KTLNLVATHR 201 VALFAFGIQQ FAQPPFGCFG KFSGIHHFPF
QMGFAPYYRR NAV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 136
shows 85.6% identity over a 209 aa overlap with a predicted ORF
(ORF 136.ng) from N. gonorrhoeae:
TABLE-US-00724 m136/g136 10 20 30 40 m136.pep
METNASILTATRLVFSAAAARTGIVPACFFAFPADGLRFVDDCLPV |:|||||||||||||
||||||||||| || ||||||||||| ||| g136
MEIRFQTAFLRLVQMKTNASILTATRLVFPAAAARTGIVPAGFFPFPADGLRFVDDRLPV 10 20
30 40 50 60 50 60 70 80 90 100 m136.pep
AVDIRQCIRQLGFQFRQLAFCELQTDSAVFLFVVNTAQCHDGIKQLFKRFIIDGFKPIGR |||: |
:||:| :|||||| |||:|:||||||||:|:|| |:||||||||| ||||||| g136
AVDVCQRVRQFGRKFRQLAFGELQADNAVFLFVVNAAHCHHGVKQLFKRFIIGGFKPIGR 70 80
90 100 110 120 110 120 130 140 150 160 m136.pep
HNIQTVKISIAPCVKIAAAVFVFIQPQIGQFFIRHRGGCFHRHCQNQPFDFGTFGGGKLR
||:|||||::|| ||||||: | ::|||||:||||||||||||||||||||||||||||| g136
HNVQTVKIGVAPSVKIAAALAVVVEPQIGQLFIRHRGGCFHRHCQNQPFDFGTFGGGKLR 130
140 150 160 170 180 170 180 190 200 210 220 m136.pep
FVAQHFGQPVERCQFVRPAQQRRHKTLNLVATHRVALFAFGIQQFAQPPFGCFGKFSGIH
||||||||||||||||||||||||||||||||||||||||||| g136
FVAQHFGQPVERCQFVRPAQQRRHKTLNLVATHRVALFAFGIQX 190 200 210 220 230
240 m136.pep HFPFQMGFAPYYRRNAVX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 527>:
TABLE-US-00725 a136.seq 1 ATGGAAACAA ACGCTTCAAT TCTTACCGCA
ACACGCCTTG TATTTTCTGC 51 CGCTGCCGCA CGGACAGGGA TCGTTCCTGC
CTGTTTTTTC GCCTTCCCTG 101 CGGACGGTTT GCGGCTTGTT GATGACCGCC
TGCCAGTAGC GGTAGATATC 151 CGCCAATGCA TAAGGCAACT CGGATTCCAG
TTCCGCCAGC TCGCCTTCTG 201 TGAATTGCAG ACGGATAGTG CCGTTGTCCT
CTTCGTCGTA AATACCGCCC 251 AATGCCATGA TGGGATAAAA CAACTCTTCA
AACGCTTCAT CATCGACGGC 301 TTCAAACCAA TCGGTCGGCA CAATATCCAA
ACCGTAAAGA TAAGCATTGC 351 ACCATGTGTA AAAATCGCTG CCGCCGTCTT
CGTTTTCATA CAGCCACAAA 401 TCGGGCAGTT TTTTATCCGA CATCGCGGCG
GTTGTTTCCA TCGCCATTGC 451 CAAAACCAGC CGTTCGATTT CGGAACGTTC
GGCGGCGGTA AATTGCGATT 501 CGTCGCCCAA CACTTCGGGC AGCCAGTCGA
GCGGTGTCAA TTTGTCCGGC 551 CCGCTCAACA GCGCCGTCAT AAAACCTTGA
ACCTCGTCGC AACGCATCGT 601 GTTGCCTTGT TCGCTTTTGG CATCCAACAA
TTCGCTCAAC CGCCGTTTGG 651 ATGCTTCGGT AAATTTTCGG GAATCCATCA
TTTTCCTTTT CCAATGGGTT 701 TTGCGCCCTA TTATAGTGGA TTAAATTTAA
ATCAGGACAA GGCGACGAAG 751 CCGCAGACAG TACAAATAGT ACGGCAAGGC
GAGGCAACGC CGTACTGGTT 801 TAAATTTAAT CCACTATATC GCCGCAATGC
CGTCTGA
This corresponds to the amino acid sequence <SEQ ID 528; ORF
136.a>:
TABLE-US-00726 a136.pep 1 METNASILTA TRLVFSAAAA RTGIVPACFF
AFPADGLRLV DDRLPVAVDI 51 RQCIRQLGFQ FRQLAFCELQ TDSAVVLFVV
NTAQCHDGIK QLFKRFIIDG 101 FKPIGRHNIQ TVKISIAPCV KIAAAVFVFI
QPQIGQFFIR HRGGCFHRHC 151 QNQPFDFGTF GGGKLRFVAQ HFGQPVERCQ
FVRPAQQRRH KTLNLVATHR 201 VALFAFGIQQ FAQPPFGCFG KFSGIHHFPF
PMGFAPYYSG LNLNQDKATK 251 PQTVQIVRQG EATPYWFKFN PLYRRNAV* m136/a136
98.3% identity in 238 aa overlap 10 20 30 40 50 60 m136.pep
METNASILTATRLVFSAAAARTGIVPACFFAFPADGLRFVDDCLPVAVDIRQCIRQLGFQ
||||||||||||||||||||||||||||||||||||||:||| ||||||||||||||||| a136
METNASILTATRLVFSAAAARTGIVPACFFAFPADGLRLVDDRLPVAVDIRQCIRQLGFQ 10 20
30 40 50 60 70 80 90 100 110 120 m136.pep
FRQLAFCELQTDSAVFLFVVNTAQCHDGIKQLFKRFIIDGFKPIGRHNIQTVKISIAPCV
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a136
FRQLAFCELQTDSAVVLFVVNTAQCHDGIKQLFKRFIIDGFKPIGRHNIQTVKISIAPCV 70 80
90 100 110 120 130 140 150 160 170 180 m136.pep
KIAAAVFVFIQPQIGQFFIRHRGGCFHRHCQNQPFDFGTFGGGKLRFVAQHFGQPVERCQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a136
KIAAAVFVFIQPQIGQFFIRHRGGCFHRHCQNQPFDFGTFGGGKLRFVAQHFGQPVERCQ 130
140 150 160 170 180 190 200 210 220 230 240 m136.pep
FVRPAQQRRHKTLNLVATHRVALFAFGIQQFAQPPFGCFGKFSGIHHFPFQMGFAPYYRR
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| a136
FVRPAQQRRHKTLNLVATHRVALFAFGIQQFAQPPFGCFGKFSGIHHFPFPMGFAPYYSG 190
200 210 220 230 240 m136.pep NAVX a136
LNLNQDKATKPQTVQIVRQGEATPYWFKFNPLYRRNAVX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 529>:
TABLE-US-00727 g137.seq 1 ATGATTATCC ATCACcaaTT CGATCCCGTC
CTCATCAGTA TCGGCCCGCT 51 TGCCGTCCGC TGGTATGCCT TAAGCTACAT
CCTCGGATTT ATTCTTTTTA 101 CCTTTCTCGG CAGAAGGCGC ATCGCGCAAG
GCTTGTCCGT TTTTACCAAA 151 GAATCGCTCG ACGACTTCCT GACATGGGGC
ATTTTGGGCG TGATTTTGGG 201 CGGACGCTTG GGCTATGTCC TGTTTTACAA
ATTCTCCGAC TACCTCGCCC 251 ATCCGCTTGA TATTTTCAAG GTATGGGAAG
GCGGAATGTC GTTCCACGGC 301 GGCTTTTTGG GTGTAGTTAT TGCCATATGG
TTGTTCAGCC GCAAGCACGG 351 CATCGGCTTC CTCAAACTGA TGGACACGGT
CGCGCCGCTC GTTCCGCTGG 401 GTCTCGCTTC GGGACGTATC GGCAACTTTA
TCAACGGCGA ACTTTGGGGA 451 CGCATTACCG ACATTAACGC ATTTTGGGCA
ATGGGCTTCC CGCAAGCGCA 501 TTACGAAGAT GCCGAAGCCG CCGCGCACAA
TCCGCTTTGG GCAGAATGGC 551 TGCAACAATA CGGTATGCTG CCGCGTCATC
CCTCGCAGCT TTATCAGTTT 601 GCCCTTGAAG GCATCTGCCT GTTCGCCGTC
GTTTGGCTGT TTTCCAAAAA 651 ACCGCGCCCG ACCGGGCAGA CTGCCGCGCT
TTTTCTCGGC GGCTACGGCG 701 TGTTCCGCTT TATTGCCGAA TTTGCGCGCC
AACCCGACGA CTATCTCGGG 751 CTGCTGACCT TGGGGCTGTC GATGGGGCAA
TGGTTGAGCG TCCCGATGAT 801 TGTTTTGGGT ATCGTCGGCT TTGTCCGGTT
CGGCATGAAA AAACAGCACT 851 GA
This corresponds to the amino acid sequence <SEQ ID 530; ORF
137.ng>:
TABLE-US-00728 g137.pep 1 MIIHHQFDPV LISIGPLAVR WYALSYILGF
ILFTFLGRRR IAQGLSVFTK 51 ESLDDFLTWG ILGVILGGRL GYVLFYKFSD
YLAHPLDIFK VWEGGMSFHG 101 GFLGVVIAIW LFSRKHGIGF LKLMDTVAPL
VPLGLASGRI GNFINGELWG 151 RITDINAFWA MGFPQAHYED AEAAAHNPLW
AEWLQQYGML PRHPSQLYQF 201 ALEGICLFAV VWLFSKKPRP TGQTAALFLG
GYGVFRFIAE FARQPDDYLG 251 LLTLGLSMGQ WLSVPMIVLG IVGFVRFGMK KQH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 531>:
TABLE-US-00729 m137.seq 1 ATGATTACCC ATCCCCAATT CGATCCCGTC
CTTATCAGTA TCGGCCCGCT 51 TGCCGTCCGC TGGTATGCCC TAAGCTACAT
CCTCGGATTT ATTCTTTTTA 101 CCTTTCTCGG CAGAAGGCGC ATCGCGCAAG
GCTTGTCCGT TTTTACCAAA 151 GAATCGCTCG ACGACTTCCT GACATGGGGC
ATTTTGGGCG TAATTTTGGG 201 CGGGCGTTTG GGTTACGTCC TGTTTTACAA
GTTTTCCGAC TACCTCGCCC 251 ATCCGCTTGA TATTTTCAAG GTATGGGAAG
GCGGAATGTC GTTCCACGGC 301 GGCTTTTTGG GTGTAGTTAT TGCCATACGG
TTGTTCGGCC GCAAACACGG 351 CATCGGCTTC CTCAAACTGA TGGATACGGT
CGCACCGCTC GTTCCGCTGG 401 GTCTCGCTTC GGGACGTATC GGCAACTTCA
TCAACGGCGA ACTTTGGGGA 451 CGCGTTACCG ACATCAACGC ATTTTGGGCA
ATGGGCTTCC CGCAGGCGCG 501 TTACGAAGAT GCCGAAGCCG CCGCGCACAA
TCCGCTTTGG GCAGAATGGC 551 TGCAACAATA CGGTATGCTG CCGCGTCATC
CCTCGCAGCT TTATCAGTTT 601 GCACTTGAAG GCATCTGCCT GTTCACCGTC
ATTTGGCTGT TCTCTAAAAA 651 ACAGCGGTCG ACCGGACAAG TCGCCTCGCT
CTTCCTCGGC GGCTACGGCA 701 TATTCCGCTT CATTGCCGAA TTCGCACGCC
AACCCGACGA CTATCTCGGG 751 CTGCTGACCT TGGGGCTGTC GATGGGGCAA
TGGTTGAGCG TCCCGATGAT 801 TGTTTTGGGT ATCGTCGGCT TTGTCCGGTT
CGGCATGAAA AAACAGCACT 851 GA
This corresponds to the amino acid sequence <SEQ ID 532; ORF
137>:
TABLE-US-00730 m137.pep 1 MITHPQFDPV LISIGPLAVR WYALSYILGF
ILFTFLGRRR IAQGLSVFTK 51 ESLDDFLTWG ILGVILGGRL GYVLFYKFSD
YLAHPLDIFK VWEGGMSFHG 101 GFLGVVIAIR LFGRKHGIGF LKLMDTVAPL
VPLGLASGRI GNFINGELWG 151 RVTDINAFWA MGFPQARYED AEAAAHNPLW
AEWLQQYGML PRHPSQLYQF 201 ALEGICLFTV IWLFSKKQRS TGQVASLFLG
GYGIFRFIAE FARQPDDYLG 251 LLTLGLSMGQ WLSVPMIVLG IVGFVRFGMK KQH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 137
shows 95.4% identity over a 283 aa overlap with a predicted ORF
(ORF 137.ng) from N. gonorrhoeae:
TABLE-US-00731 m137/g137 10 20 30 40 50 60 m137.pep
MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQGLSVFTKESLDDFLTWG || |
||||||||||||||||||||||||||||||||||||||||||||||||||||||| g137
MIIHHQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQGLSVFTKESLDDFLTWG 10 20
30 40 50 60 70 80 90 100 110 120 m137.pep
ILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGFLGVVIAIRLFGRKHGIGF
||||||||||||||||||||||||||||||||||||||||||||||||| ||:||||||| g137
ILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGFLGVVIAIWLFSRKHGIGF 70 80
90 100 110 120 130 140 150 160 170 180 m137.pep
LKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWAMGFPQARYEDAEAAAHNPLW
|||||||||||||||||||||||||||||||:||||||||||||||:||||||||||||| g137
LKLMDTVAPLVPLGLASGRIGNFINGELWGRITDINAFWAMGFPQAHYEDAEAAAHNPLW 130
140 150 160 170 180 190 200 210 220 230 240 m137.pep
AEWLQQYGMLPRHPSQLYQFALEGICLFTVIWLFSKKQRSTGQVASLFLGGYGIFRFIAE
||||||||||||||||||||||||||||:|:|||||| | |||:|:|||||||:|||||| g137
AEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKPRPTGQTAALFLGGYGVFRFIAE 190
200 210 220 230 240 250 260 270 280 m137.pep
FARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVRFGMKKQHX
|||||||||||||||||||||||||||||||||||||||||||| g137
FARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVRFGMKKQHX 250 260 270 280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 533>:
TABLE-US-00732 a137.seq 1 ATGATTACCC ATCCCCAATT CGACCCCGTC
CTTATCAGTA TCGGCCCGCT 51 TGCCGTCCGC TGGTATGCCC TAAGCTACAT
CCTCGGATTT ATTCTTTTTA 101 CCTTTCTCGG CAGAAGGCGC ATCGCGCAAG
GCTTGTCCGT TTTTACCAAA 151 GAATCGCTCG ACGACTTCCT GACATGGGGC
ATTTTGGGCG TAATTTTGGG 201 CGGGCGTTTG GGTTACGTCC TGTTTTACAA
GTTTTCCGAC TACCTCGCCC 251 ATCCGCTTGA TATTTTCAAG GTATGGGAAG
GCGGAATGTC GTTCCACGGC 301 GGCTTTTTGG GTGTAGTTAT TGCCATATGG
TTGTTCGGTC GCAAACACGG 351 CATCGGCTTC CTCAAACTGA TGGACACGGT
CGCACCGCTC GTTCCACTGG 401 GTCTCGCTTC GGGACGTATC GGCAACTTCA
TCAACGGCGA ACTTTGGGGA 451 CGCGTTACCG ACATCAACGC ATTTTGGGCA
ATGGGCTTCC CGCAGGCGCG 501 TTACGAAGAC CTCGAAGCCG CCGCGCACAA
TCCGCTTTGG GCAGAATGGC 551 TGCAACAATA CGGTATGCTG CCGCGTCATC
CCTCGCAGCT TTATCAGTTT 601 GCACTTGAAG GCATCTGCCT GTTCGCCGTC
GTTTGGCTGT TCTCTAAAAA 651 ACAGCGGCCG ACCGGACAAG TCGCCTCACT
CTTCCTCGGC GGCTACGGCA 701 TATTCCGCTT CATTGCCGAA TTTGCACGCC
AACCCGACGA CTATCTCGGG 751 CTGCTGACCT TGGGGCTGTC GATGGGGCAA
TGGTTGAGCG TCCCGATGAT 801 TGTTTTGGGT ATCGTCGGCT TTGTCCGGTT
CGGCATGAAA AAACAGCACT 851 GA
This corresponds to the amino acid sequence <SEQ ID 534; ORF
137.a>:
TABLE-US-00733 a137.pep 1 MITHPQFDPV LISIGPLAVR WYALSYILGF
ILFTFLGRRR IAQGLSVFTK 51 ESLDDFLTWG ILGVILGGRL GYVLFYKFSD
YLAHPLDIFK VWEGGMSFHG 101 GFLGVVIAIW LFGRKHGIGF LKLMDTVAPL
VPLGLASGRI GNFINGELWG 151 RVTDINAFWA MGFPQARYED LEAAAHNPLW
AEWLQQYGML PRHPSQLYQF 201 ALEGICLFAV VWLFSKKQRP TGQVASLFLG
GYGIFRFIAE FARQPDDYLG 251 LLTLGLSMGQ WLSVPMIVLG IVGFVRFGMK KQH*
m137/a137 98.2% identity in 283 aa overlap 10 20 30 40 50 60
m137.pep
MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQGLSVFTKESLDDFLTWG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a137
MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQGLSVFTKESLDDFLTWG 10 20
30 40 50 60 70 80 90 100 110 120 m137.pep
ILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGFLGVVIAIRLFGRKHGIGF
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a137
ILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGFLGVVIAIWLFGRKHGIGF 70 80
90 100 110 120 130 140 150 160 170 180 m137.pep
LKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWAMGFPQARYEDAEAAAHNPLW
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| a137
LKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWAMGFPQARYEDLEAAAHNPLW 130
140 150 160 170 180 190 200 210 220 230 240 m137.pep
AEWLQQYGMLPRHPSQLYQFALEGICLFTVIWLFSKKQRSTGQVASLFLGGYGIFRFIAE
||||||||||||||||||||||||||||:|:|||||||| |||||||||||||||||||| a137
AEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQRPTGQVASLFLGGYGIFRFIAE 190
200 210 220 230 240 250 260 270 280 m137.pep
FARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVRFGMKKQHX
|||||||||||||||||||||||||||||||||||||||||||| a137
FARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVRFGMKKQHX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 535>:
TABLE-US-00734 g138.seq 1 ATGGAGTTTG AAAACATTAT TTCCGCCGCc
gaCAAGGCGC GTATCCTTGC 51 CGAAGCACTG CCTTACAtcc gccgGTTTTC
CGGTTCGGTC GCCGTCATCA 101 AGTATGGCGG CAACGCGATG ACCGAACCTG
CCTTGAAAGA AGGGTTTGCC 151 CGCGATGTCG TGCTGCTGAA GCTGGTCGGC
ATTCATCCCG TCATCGTTCA 201 CGGCGGCGGG CCGCAGATCA ATGCGATGCT
TGAAAAAGTC GGCAAAAAGG 251 GCGAATTTGT CCAAGGAATG CGCGTTACCG
ACAAAGAGAC GATGGATATT 301 GTCGAAATGG TATTGGGCGG GCACGTCAAC
AAGGAAATCG TGTCGATGAT 351 TAACACATAT GGAGGGCACG CGGTCGGCGT
GAGCGGGCGC GACGACCATT 401 TCATTAAGGC GAAGAAACTT TTGGTCGATA
CGCCCGAACA GAATAGCGTG 451 GACATCGGAC AGGTCGGTAC GGTGGAAAGC
ATCGATACCG GTTTGGTTAA 501 AGGGCTGATA GAACGCGGCT GCATTCCCGT
CGTCGCCCCC GTCGGCGTAG 551 GTGAAAAAGG CGAAGCGTTC AACATCAACG
CCGATTTGGT GGCAGGCAAA 601 TTGGCGGAAG AATTGAACGC CGAAAAACTC
TTGATGATGA CGAAtatcgc 651 cgGTGTGATG GACAAAACGG GCAATCTGCT
GACCAAACTC acgCCGAAAC 701 GGATTGATGG GCTGATTGCC GACGGCACGC
TGTATGGCGG TATGCTGCCG 751 AAAATCGCTT CTGCGGTCGA AGCcgccgtc
aACGGTGTGA AAGCCACGCA 801 CATCATCGAC GGCAGGTTGC CCAACGCGCT
TTTGCTGGAA ATCTTTACCG 851 ATGCCGGTAT CGGGTCGATG ATTTTAGGCA
GAGGGGAAGA TGCCTGA
This corresponds to the amino acid sequence <SEQ ID 536; ORF
138.ng>:
TABLE-US-00735 g138.pep 1 MEFENIISAA DKARILAEAL PYIRRFSGSV
AVIKYGGNAM TEPALKEGFA 51 RDVVLLKLVG IHPVIVHGGG PQINAMLEKV
GKKGEFVQGM RVTDKETMDI 101 VEMVLGGHVN KEIVSMINTY GGHAVGVSGR
DDHFIKAKKL LVDTPEQNSV 151 DIGQVGTVES IDTGLVKGLI ERGCIPVVAP
VGVGEKGEAF NINADLVAGK 201 LAEELNAEKL LMMTNIAGVM DKTGNLLTKL
TPKRIDGLIA DGTLYGGMLP 251 KIASAVEAAV NGVKATHIID GRLPNALLLE
IFTDAGIGSM ILGRGEDA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 537>:
TABLE-US-00736 m138.seq 1 ATGGAGTCTG AAAACATTAT TTCCGCCGCC
GACAAGGCGC GTATCCTTGC 51 CGAAGCGCTG CCTTACATCC GCCGGTTTTC
CGGTTCGGTC GCCGTCATCA 101 AATACGGCGG CAACGCGATG ACCGAACCTG
CCTTGAAAGA AGGGTTTGCC 151 CGCGATGTCG TGCTGCTGAA GCTGGTCGGC
ATTCATCCCG TCATCGTTCA 201 CGGCGGCGGG CCGCAGATCA ATGCGATGCT
TGAAAAAGTC GGCAAAAAGG 251 GTGAGTTTGT CCAAGGAATG CGCGTTACCG
ACAAAGAGGC GATGGATATT 301 GTCGAAATGG TGTTGGGCGG GCATGTCAAT
AAAGAAATCG TGTCGATGAT 351 TAACACATAT GGCGGACACG CGGTCGGCGT
AAGCGGACGC GACGACCATT 401 TCATTAAGGC GAAGAAACTT TTGATCGATA
CGCCCGAACA GAATGGCGTG 451 GACATCGGAC AGGTCGGTAC GGTGGAAAGC
ATCGATACCG GTTTGGTTAA 501 AGGGCTGATA GAACGTGGCT GCATTCCCGT
CGTCGCCCCC GTCGGCGTAG 551 GTGAAAAAGG CGAAGCGTTC AACATCAACG
CCGATTTGGT AGCAGGCAAA 601 TTGGCGGAAG AATTGAACGC CGAAAAACTC
TTGATGATGA CGAATATCGC 651 CGGTGTGATG GACAAAACGG GCAATCTGCT
GACCAAACTC ACGCCGAAAC 701 GGATTGATGA ACTGATTGCC GACGGCACGC
TGTATGGCGG TATGCTGCCG 751 AAAATCGCTT CTGCGGTCGA AGCCGCCGTC
AACGGTGTGA AAGCCACGCA 801 TATCATCGAC GGCAGGTTGC CCAACGCGCT
TTTGCTGGAA ATCTTTACCG 851 ATGCCGGTAT CGGTTCGATG ATTTTGGGCG
GTGGGGAAGA TGCCTGA
This corresponds to the amino acid sequence <SEQ ID 538; ORF
138>:
TABLE-US-00737 m138.pep 1 MESENIISAA DKARILAEAL PYIRRFSGSV
AVIKYGGNAM TEPALKEGFA 51 RDVVLLKLVG IHPVIVHGGG PQINAMLEKV
GKKGEFVQGM RVTDKEAMDI 101 VEMVLGGHVN KEIVSMINTY GGHAVGVSGR
DDHFIKAKKL LIDTPEQNGV 151 DIGQVGTVES IDTGLVKGLI ERGCIPVVAP
VGVGEKGEAF NINADLVAGK 201 LAEELNAEKL LMMTNIAGVM DKTGNLLTKL
TPKRIDELIA DGTLYGGMLP 251 KIASAVEAAV NGVKATHIID GRLPNALLLE
IFTDAGIGSM ILGGGEDA*
Computer analysis of tins amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 138
shows 98.0% identity over a 298 aa overlap with a predicted ORF
(ORF 138.ng) from N. gonorrhoeae:
TABLE-US-00738 m138/g138 10 20 30 40 50 60 m138.pep
MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPALKEGFARDVVLLKLVG ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g138
MEFENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPALKEGFARDVVLLKLVG 10 20
30 40 50 60 70 80 90 100 110 120 m138.pep
IHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVEMVLGGHVNKEIVSMINTY
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| g138
IHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVEMVLGGHVNKEIVSMINTY 70 80
90 100 110 120 130 140 150 160 170 180 m138.pep
GGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVESIDTGLVKGLIERGCIPVVAP
|||||||||||||||||||||:||||||:||||||||||||||||||||||||||||||| g138
GGHAVGVSGRDDHFIKAKKLLVDTPEQNSVDIGQVGTVESIDTGLVKGLIERGCIPVVAP 130
140 150 160 170 180 190 200 210 220 230 240 m138.pep
VGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAGVMDKTGNLLTKLTPKRIDELIA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| g138
VGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAGVMDKTGNLLTKLTPKRIDGLIA 190
200 210 220 230 240 250 260 270 280 290 299 m138.pep
DGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNALLLEIFTDAGIGSMILGGGEDAX
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| g138
DGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNALLLEIFTDAGIGSMILGRGEDAX 250 260
270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 539>:
TABLE-US-00739 a138.seq 1 ATGGAGTCTG AAAACATTAT TTCCGCCGCC
GACAAGGCGC GTATCCTTGC 51 CGAAGCGCTG CCTTACATCC GCCGGTTTTC
CGGTTCGGTC GCCGTCATCA 101 AATACGGCGG CAACGCGATG ACCGAACCTG
CCTTGAAAGA AGGGTTTGCC 151 CGCGATGTCG TGCTGCTGAA GCTGGTCGGC
ATTCATCCCG TCATCGTTCA 201 CGGCGGCGGG CCGCAGATCA ATGCGATGCT
TGAAAAAGTC GGCAAAAAGG 251 GTGAGTTTGT CCAAGGAATG CGCGTTACCG
ACAAAGAGGC GATGGATATT 301 GTCGAAATGG TGTTGGGCGG GCATGTCAAT
AAAGAAATCG TGTCGATGAT 351 TAACACATAT GGCGGACACG CGGTCGGCGT
AAGCGGACGC GACGACCATT 401 TCATTAAGGC GAAGAAACTT TTGATCGATA
CGCCCGAACA GAATGGCGTG 451 GACATCGGAC AGGTCGGTAC GGTGGAAAGC
ATCGATACCG GTTTGGTTAA 501 AGGGCTGATA GAACGTGGCT GCATTCCCGT
CGTCGCCCCC GTCGGCGTAG 551 GTGAAAAAGG CGAAGCGTTC AACATCAACG
CCGATTTGGT AGCAGGCAAA 601 TTGGCGGAAG AATTGAACGC CGAAAAACTC
TTGATGATGA CGAATATCGC 651 CGGTGTGATG GACAAAACGG GCAATCTGCT
GACCAAACTC ACGCCGAAAC 701 GGATTGATGA ACTGATTGCC GACGGCACGC
TGTATGGCGG TATGCTGCCG 751 AAAATCGCTT CTGCGGTCGA AGCCGCCGTC
AACGGCGTGA AAGCCACGCA 801 TATCATCGAC GGCAGGGTGC CCAACGCGCT
TTTGCTGGAA ATCTTTACCG 851 ATGCCGGTAT CGGTTCGATG ATTTTGGGCG
GTGGGGAAGA TGCCTGA
This corresponds to the amino acid sequence <SEQ ID 540; ORF
138.a>:
TABLE-US-00740 a138.pep 1 MESENIISAA DKARILAEAL PYIRRFSGSV
AVIKYGGNAM TEPALKEGFA 51 RDVVLLKLVG IHPVIVHGGG PQINAMLEKV
GKKGEFVQGM RVTDKEAMDI 101 VEMVLGGHVN KEIVSMINTY GGHAVGVSGR
DDHFIKAKKL LIDTPEQNGV 151 DIGQVGTVES IDTGLVKGLI ERGCIPVVAP
VGVGEKGEAF NINADLVAGK 201 LAEELNAEKL LMMTNIAGVM DKTGNLLTKL
TPKRIDELIA DGTLYGGMLP 251 KIASAVEAAV NGVKATHIID GRVPNALLLE
IFTDAGIGSM ILGGGEDA* m138/a138 99.7% identity in 298 aa overlap 10
20 30 40 50 60 m138.pep
MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPALKEGFARDVVLLKLVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a138
MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPALKEGFARDVVLLKLVG 10 20
30 40 50 60 70 80 90 100 110 120 m138.pep
IHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVEMVLGGHVNKEIVSMINTY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a138
IHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVEMVLGGHVNKEIVSMINTY 70 80
90 100 110 120 130 140 150 160 170 180 m138.pep
GGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVESIDTGLVKGLIERGCIPVVAP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a138
GGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVESIDTGLVKGLIERGCIPVVAP 130
140 150 160 170 180 190 200 210 220 230 240 m138.pep
VGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAGVMDKTGNLLTKLTPKRIDELIA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a138
VGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAGVMDKTGNLLTKLTPKRIDELIA 190
200 210 220 230 240 250 260 270 280 290 299 m138.pep
DGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNALLLEIFTDAGIGSMILGGGEDAX
||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| a138
DGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNALLLEIFTDAGIGSMILGGGEDAX 250 260
270 280 290
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 541>:
TABLE-US-00741 g139.seq 1 ATGCGAACCA CCTCAACCTT CCCTACAAAA
ACTTTCAAAC CGGCTGCCAT 51 GGCGTTAGCT GTTGCAACAA CACTTTCTGC
CTGCTTAggc ggcggcggag 101 gcGGCACTTC TGCTCCCGAC TTTAATGCAG
GCGGCACCGG TATCGGCAGC 151 AACAGCAGGG CAACGATAGC GGAATCAGCA
GCAGTATCTT ACGCCGGTAT 201 AAAAAACGAA ATGTGCAAAG ACAGAAGCAT
GCTCTGTGCC GGTCGGGATG 251 ACGTTGCGGT TACAGACAGG GATGCCAAAA
TCAAAGCCCC CCGAATCTGC 301 ATACCGGAGA CTTTTCAAAC CCAAATGACC
AATATTAAGA ATATGATCAA 351 CCTCAAACCT GCAATTGAAG CAGGCTATAC
AGGACGCGGG GTAGAGGTAG 401 GTATCGTCGA TACAGGCGAA TCCGTCGGCA
GCATATCCTT TCCCGAACTG 451 TATGGCAGAA AAGAACACGG CTATAACGAA
AATTACAAAA ACAAATTACA 501 AAAACTATAC GGCGTATATG CGGAAGGAAG
CGCCTGA
This corresponds to the amino acid sequence <SEQ ID 542; ORF
138.ng>:
TABLE-US-00742 g139.pep 1 MRTTSTFPTK TFKPAAMALA VATTLSACLG
GGGGGTSAPD FNAGGTGIGS 51 NSRATIAESA AVSYAGIKNE MCKDRSMLCA
GRDDVAVTDR DAKIKAPRIC 101 IPETFQTQMT NIKNMINLKP AIEAGYTGRG
VEVGIVDTGE SVGSISFPEL 151 YGRKEHGYNE NYKNKLQKLY GVYAEGSA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 543>:
TABLE-US-00743 m139.seq 1 ATGCGAACGA CCCCAACCTT CCCTACAAAA
ACTTTCAAAC CGACTGCCAT 51 GGCGTTAGCT GTTGCAACAA CACTTTCTGC
CTGCTTAGGC GGCGGCGGAG 101 GCGGCACTTC TGCGCCCGAC TTCAATGCAG
GCGGTACCGG TATCGGCAGC 151 AACAGCAGAG CAACAACAGC GAAATCAGCA
GCAGTATCTT ACGCCGGTAT 201 CAAGAACGAA ATGTGCAAAG ACAGAAGCAT
GCTCTGTGCC GGTCGGGATG 251 ACGTTGCGGT TACAGACAGG GATGCCAAAA
TCAATGCCCC CCCCCGAATC 301 TGCATACCGG AGACTTTCCA AACCCAAATG
ACGCATtACA AGAATTTGAT 351 CAACCTCAAA CCTGCAATTG AAGCAGGCTA
TACAGGACGC GGGGTAGAGG 401 TAGGTATCGT CGACACAGGC GAATCCGTCG
GCAGCATATC CTTTCCCGAA 451 CTGTATGGCA GAAAAGAACA CGGCTATAAC
GAAAATTACG AAAAACTATA 501 CGGCGTATAT GCGGAAGGAA GCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 544; ORF
138>:
TABLE-US-00744 m139.pep 1 MRTTPTFPTK TFKPTAMALA VATTLSACLG
GGGGGTSAPD FNAGGTGIGS 51 NSRATTAKSA AVSYAGIKNE MCKDRSMLCA
GRDDVAVTDR DAKINAPPRI 101 CIPETFQTQM THYKNLINLK PAIEAGYTGR
GVEVGIVDTG ESVGSISFPE 151 LYGRKEHGYN ENYEKLYGVY AEGSA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 138
shows 92.2% identity over a 179 aa overlap with a predicted ORF
(ORF 138.ng) from N. gonorrhoeae:
TABLE-US-00745 m139/g139 10 20 30 40 50 60 m139.pep
MRTTPTFPTKTFKPTAMALAVATTLSACLGGGGGGTSAPDFNAGGTGIGSNSRATTAKSA ||||
|||||||||:|||||||||||||||||||||||||||||||||||||||| |:|| g139
MRTTSTFPTKTFKPAAMALAVATTLSACLGGGGGGTSAPDFNAGGTGIGSNSRATIAESA 10 20
30 40 50 60 70 80 90 100 110 120 m139.pep
AVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPRICIPETFQTQMTHYKNLINLK
||||||||||||||||||||||||||||||||||:|| |||||||||||||: ||:|||| g139
AVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKIKAP-RICIPETFQTQMTNIKNMINLK 70 80
90 100 110 130 140 150 160 170 m139.pep
PAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNENY----EKLYGVYAEGSAX
||||||||||||||||||||||||||||||||||||||||||| :|||||||||||| g139
PAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNENYKNKLQKLYGVYAEGSAX 120
130 140 150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 545>:
TABLE-US-00746 a139.seq 1 ATGCGAACGA CCCCAACCTT CCCTACAAAA
ACTTTCAAAC CGGCTGCCAT 51 GGCGTTAGCT GTTGCAACAA CACTTTCTGC
CTGCTTAGGC GGCGGCGGAG 101 GCGGCACTTC TGCGCCCGAC TTCAATGCAG
GCGGCACCGG TATCGGCAGC 151 AACAGCAGGG CAACAACAGC GAAATCAGCA
GCAATATCTT ACGCCGGTAT 201 CAAGAACGAA ATGTGCAAAG ACAGAAGCAT
GCTCTGTGCC GGTCGGGATG 251 ACGTTGCGGT TACAGACAGG GATGCCAAAA
TCAATGCCCC CCCCCGAATC 301 TGCATACCGG AGACTTTACA AACCCAAATG
ACGCAT.ACA AGAATTTGAT 351 CAACCTCAAA CCTGCAATTG AAGCAGGCTA
TACAGGACGC GGGGTAGAGG 401 TAGGTATCGT CGACACAGGC GAATCCGTCG
GCAGCATATC CTTTCCCGAA 451 CTGTATGGCA GAAAAGAACA CGGCTATAAC
GAAAATTAC. AAAAACTATA 501 CGGCGTATAT GCGGAAGGAA GCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 546; ORF
139.a>:
TABLE-US-00747 a139.pep 1 MRTTPTFPTK TFKPAAMALA VATTLSACLG
GGGGGTSAPD FNAGGTGIGS 51 NSRATTAKSA AISYAGIKNE MCKDRSMLCA
GRDDVAVTDR DAKINAPPRI 101 CIPETLQTQM THXKNLINLK PAIEAGYTGR
GVEVGIVDTG ESVGSISFPE 151 LYGRKEHGYN ENYXKLYGVY AEGSA* m139/a139
97.1% identity in 175 aa overlap 10 20 30 40 50 60 m139.pep
MRTTPTFPTKTFKPTAMALAVATTLSACLGGGGGGTSAPDFNAGGTGIGSNSRATTAKSA
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| a139
MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGGTSAPDFNAGGTGIGSNSRATTAKSA 10 20
30 40 50 60 70 80 90 100 110 120 m139.pep
AVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPRICIPETFQTQMTHYKNLINLK
|:|||||||||||||||||||||||||||||||||||||||||||:|||||| ||||||| a139
AISYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPRICIPETLQTQMTHXKNLINLK 70 80
90 100 110 120 130 140 150 160 170 m139.pep
PAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNENYEKLYGVYAEGSAX
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| a139
PAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNENYXKLYGVYAEGSAX 130 140
150 160 170
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 547>:
TABLE-US-00748 g140.seq 1 Atgtcggcac gCGGCAAGGG GGCAGgctat
ctcAACAGTA CCGGACGACa 51 TGTTCCCTTC CTGAGTGCCG CCAAAATCGG
GCAGGATTAT TCTTTCTTCA 101 AAAATATCAA AACCGACGGC GGTCTGCTGG
CTTCCCTCGA CAGCGTCGAA 151 AAAACAGCGG GCAGTGAAGG CGACACGCCG
TCCTATTATG TCCGTCGCGG 201 CAATGCGGCA CGGACTGCTT CGGCAGCGGC
ACATTCCGCG CCCGCCGGTC 251 TGAAACACGC CGTAGAACAG GGCGGCAGCA
ATCTGGAAAA CCTGATGGTC 301 GAGCTGGATG CCTCCGAATC ATCCGCAACA
CCCGAGACGG TTGAAACTGC 351 GGTCGCCGAC CGCACAGATA TGCCGGGCAT
CCGCCTACGG CGCACAACTT 401 TCCGCACAGC GGCAGCCGTA CAGCATGCGA
ATACCGCCGA CGGCGTACGc 451 aTCTTcaaCA GTCTCGCCGC TAccgTCTAt
GccgACAGTG CCGCCGCCCA 501 TGccgATATG CAGGGACGCC GCCTGAAAGC
CGTATCGGAC GGGTTGGACC 551 ACAACGGTAC GGGTCTGCGC GTCATCGCGC
AAACCCAACA GGACGGTGGA 601 ACGTGGGAAC AGGGCGGTGT CGAAGGCAAA
ATGCGCGGCA GTACCCAAAC 651 TATCGGCATT GCCGCGAAAA CCGGCGAAAA
TACGACAGCA GCCGCCACAC 701 TGGGCATAGG ACGCAGCACA TGGAGCGAAA
ACAGTGCAAA TGCAAAAACC 751 GACAGCATTA GTCTGTTTGC AGGCATACGG
CACGATGTGG GCGATATCGG 801 CTATCTCAAA GGCCTGTTCT CctaCGGACG
CTACAAAAAC AGCATCAGCC 851 GCAGCACCGG TGCGGATGAA TATGCGGAAG
GCAGCGTCAA CGGCACGCTG 901 ATGCAGCTGG GCGCACTGGG TGGTGTCAAC
GTTCCGTTTG CCGCAACGGG 951 AGATTTGACG GTTGAAGGCG GTCTGCGCCA
CGACCTGCTC AAACAGGATG 1001 CATTCGCCGA AAAAGGCagt GCTTTGGGCT
GGAGCGGCAA CAGCCTCACT 1051 GAAGGCACAC TGGTCGGACT CGCGGGTCTG
AAACTGTCGC AACCCTTGAG 1101 CGATAAAGCC GTCCTGTCTG CGACGGCGGG
CGTGGAACGC GACCTGAACG 1151 GACGCGACTA CGCGGTAACG GGCGGCTTTA
CCGGCGCGGC TGCAGCAACC 1201 GGCAAGACGG GTGCACGCAA TATGCCGCAC
ACCCGCCGGG TTGCCGGTCT 1251 GGGGGTGGAT GTCGAATTCG GCAACGGCTG
GAACGGCTTG GCACGTTACA 1301 GCTACACCGG TTCCAAACAG TACGGCAACC
ACAGCGGACA AATCGGCGTA 1351 GGCTACCGGT TCTGA
This corresponds to the amino acid sequence <SEQ ID 548; ORF
140.ng>:
TABLE-US-00749 g140.pep 1 MSARGKGAGY LNSTGRHVPF LSAAKIGQDY
SFFKNIKTDG GLLASLDSVE 51 KTAGSEGDTP SYYVRRGNAA RTASAAAHSA
PAGLKHAVEQ GGSNLENLMV 101 ELDASESSAT PETVETAVAD RTDMPGIRLR
RTTFRTAAAV QHANTADGVR 151 IFNSLAATVY ADSAAAHADM QGRRLKAVSD
GLDHNGTGLR VIAQTQQDGG 201 TWEQGGVEGK MRGSTQTIGI AAKTGENTTA
AATLGIGRST WSENSANAKT 251 DSISLFAGIR HDVGDIGYLK GLFSYGRYKN
SISRSTGADE YAEGSVNGTL 301 MQLGALGGVN VPFAATGDLT VEGGLRHDLL
KQDAFAEKGS ALGWSGNSLT 351 EGTLVGLAGL KLSQPLSDKA VLSATAGVER
DLNGRDYAVT GGFTGAAAAT 401 GKTGARNMPH TRRVAGLGVD VEFGNGWNGL
ARYSYTGSKQ YGNHSGQIGV 451 GYRF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 549>:
TABLE-US-00750 m140.seq 1 ATGTCGGCAC GCGGCAAGGG GGCAGGCTAT
CTCAACAGTA CCGGACGACG 51 TGTTCCCTTC CTGAGTGCCG CCAAAATCGG
GCAGGATTAT TCTTTCTTCA 101 CAAACATCGA AACCGACGGC GGCCTGCTGG
CTTCCCTCGA CAGCGTCGAA 151 AAAACAGCGG GCAGTGAAGG CGACACGCTG
TCCTATTATG TCCGTCGCGG 201 CAATGCGGCA CGGACTGCTT CGGCAGCGGC
ACATTCCGCG CCCGCCGGTC 251 TGAAACACGC CGTAGAACAG GGCGGCAGCA
ATCTGGAAAA CCTGATGGTC 301 GAACTGGATG CCTCCGAATC ATCCGCAACA
CCCGAGACGG TTGAAACTGC 351 GGCAGCCGAC CGCACAGATA TGCCGGGCAT
CCGCCCCTAC GGCGCAACTT 401 TCCGCGCAGC GGCAGCCGTA CAGCATGCGA
ATGCCGCCGA CGGTGTACGC 451 ATCTTCAACA GTCTCGCCGC TACCGTCTAT
GCCGACAGTA CCGCCGCCCA 501 TGCCGATATG CAGGGACGCC GCCTGAAAGC
CGTATCGGAC GGGTTGGACC 551 ACAACGGCAC GGGTCTGCGC GTCATCGCGC
AAACCCAACA GGACGGTGGA 601 ACGTGGGAAC AGGGCGGTGT TGAAGGCAAA
ATGCGCGGCA GTACCCAAAC 651 CGTCGGCATT GCCGCGAAAA CCGGCGAAAA
TACGACAGCA GCCGCCACAC 701 TGGGCATGGG ACGCAGCACA TGGAGCGAAA
ACAGTGCAAA TGCAAAAACC 751 GACAGCATTA GTCTGTTTGC AGGCATACGG
CACGATGCGG GCGATATCGG 801 CTATCTCAAA GGCCTGTTCT CCTACGGACG
CTACAAAAAC AGCATCAGCC 851 GCAGCACCGG TGCGGACGAA CATGCGGAAG
GCAGCGTCAA CGGCACGCTG 901 ATGCAGCTGG GCGCACTGGG CGGTGTCAAC
GTTCCGTTTG CCGCAACGGG 951 AGATTTGACG GTCGAAGGCG GTCTGCGCTA
CGACCTGCTC AAACAGGATG 1001 CATTCGCCGA AAAAGGCAGT GCTTTGGGCT
GGAGCGGCAA CAGCCTCACT 1051 GAAGGCACGC TGGTCGGACT CGCGGGTCTG
AAGCTGTCGC AACCCTTGAG 1101 CGATAAAGCC GTCCTGTTTG CAACGGCGGG
CGTGGAACGC GACCTGAACG 1151 GACGCGACTA CACGGTAACG GGCGGCTTTA
CCGGCGCGAC TGCAGCAACC 1201 GGCAAGACGG GGGCACGCAA TATGCCGCAC
ACCCGTCTGG TTGCCGGCCT 1251 GGGCGCGGAT GTCGAATTCG GCAACGGCTG
GAACGGCTTG GCACGTTACA 1301 GCTACGCCGG TTCCAAACAG TACGGCAACC
ACAGCGGACG AGTCGGCGTA 1351 GGCTACCGGT TCTGA
This corresponds to the amino acid sequence <SEQ ID 550; ORF
140>:
TABLE-US-00751 m140.pep 1 MSARGKGAGY LNSTGRRVPF LSAAKIGQDY
SFFTNIETDG GLLASLDSVE 51 KTAGSEGDTL SYYVRRGNAA RTASAAAHSA
PAGLKHAVEQ GGSNLENLMV 101 ELDASESSAT PETVETAAAD RTDMPGIRPY
GATFRAAAAV QHANAADGVR 151 IFNSLAATVY ADSTAAHADM QGRRLKAVSD
GLDHNGTGLR VIAQTQQDGG 201 TWEQGGVEGK MRGSTQTVGI AAKTGENTTA
AATLGMGRST WSENSANAKT 251 DSISLFAGIR HDAGDIGYLK GLFSYGRYKN
SISRSTGADE HAEGSVNGTL 301 MQLGALGGVN VPFAATGDLT VEGGLRYDLL
KQDAFAEKGS ALGWSGNSLT 351 EGTLVGLAGL KLSQPLSDKA VLFATAGVER
DLNGRDYTVT GGFTGATAAT 401 GKTGARNMPH TRLVAGLGAD VEFGNGWNGL
ARYSYAGSKQ YGNHSGRVGV 451 GYRF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 140
shows 94.5% identity over a 454 aa overlap with a predicted ORF
(ORF 140.ng) from N. gonorrhoeae:
TABLE-US-00752 m140/g140 10 20 30 40 50 60 m140.pep
MSARGKGAGYLNSTGRRVPFLSAAKIGQDYSFFTNIETDGGLLASLDSVEKTAGSEGDTL
||||||||||||||||:|||||||||||||||| ||:|||||||||||||||||||||| g140
MSARGKGAGYLNSTGRHVPFLSAAKIGQDYSFFKNIKTDGGLLASLDSVEKTAGSEGDTP 10 20
30 40 50 60 70 80 90 100 110 120 m140.pep
SYYVRRGNAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g140
SYYVRRGNAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAVAD 70 80
90 100 110 120 130 140 150 160 170 180 m140.pep
RTDMPGIRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSD
|||||||| :|||:||||||||:||||||||||||||||||:|||||||||||||||| g140
RTDMPGIRLRRTTFRTAAAVQHANTADGVRIFNSLAATVYADSAAAHADMQGRRLKAVSD 130
140 150 160 170 180 190 200 210 220 230 240 m140.pep
GLDHNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRST
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||:|||| g140
GLDHNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTIGIAAKTGENTTAAATLGIGRST 190
200 210 220 230 240 250 260 270 280 290 300 m140.pep
WSENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTL
||||||||||||||||||||||:|||||||||||||||||||||||||||:||||||||| g140
WSENSANAKTDSISLFAGIRHDVGDIGYLKGLFSYGRYKNSISRSTGADEYAEGSVNGTL 250
260 270 280 290 300 310 320 330 340 350 360 m140.pep
MQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| g140
MQLGALGGVNVPFAATGDLTVEGGLRHDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL 310
320 330 340 350 360 370 380 390 400 410 420 m140.pep
KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLGAD
|||||||||||| ||||||||||||||:||||||||:||||||||||||||| |||||:| g140
KLSQPLSDKAVLSATAGVERDLNGRDYAVTGGFTGAAAATGKTGARNMPHTRRVAGLGVD 370
380 390 400 410 420 430 440 450 m140.pep
VEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRFX
|||||||||||||||:||||||||||::||||||| g140
VEFGNGWNGLARYSYTGSKQYGNHSGQIGVGYRFX 430 440 450
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 551>:
TABLE-US-00753 a140.seq 1 ATGTCGGCAG GCGGTAAGGG GGCAGGCTAT
CTCAACCGTA CCGGACAACG 51 TGTTCCCTTC CTGAGTGCCG CCAAAATCGG
GCGGGATTAT TCTTTCTTCA 101 CAAACATCGA AACCGACGGC GGTCTGCTGG
CTTCCCTCGA CAGCGTCGAA 151 AAAACAGCGG GTAGTGAAGG CGACACGCTG
TCCTATTATG TCCGTCGCGG 201 CAATGCGGCA CGGACTGCTT CGGCAGCGGC
ACATTCCGCG CCCGCCGGTC 251 TGAAACACGC CGTAGAACAG GGCGGCAGCA
ATCTGGAAAA CCTGATGGTC 301 GAACTGGATG CCTCCGAATC ATCCGCAACA
CCCGAGACGG TTGAAACTGC 351 GGCCGCCGAC CGCACAGATA TGCCGGGCAT
CCGCCCCTAC GGCGCAACTT 401 TCCGCGCAGC GGCAGCCGTA CAGCATGCGA
ATGCCGCCGA CGGTGTACGC 451 ATCTTCAACA ATCTCGCCGC TACCGTCTAT
GCCGACAGTA CCGCCGCCCA 501 TGCCGATATG CAGGGACGCC GCCTGAAAGC
CGTATCGGAC GGGTTGGACC 551 ACAACGCTAC GGGTCTGCGC GTCATCGCGC
AAACCCAACA GGACGGTGGA 601 ACGTGGGAAC AGGGCGGTGT TGAAGGCAAA
ATGCGCGGCA GTACCCAAAC 651 CGTCGGCATT GCCGCGAAAA CCGGCGAAAA
TACGACAGCA GCCGCCACAC 701 TGGGCATGGG ACACAGCACA TGGAGCGAAA
ACAGTGCAAA TGCAAAAACC 751 GACAGCATTA GTCTGTTTGC AGGCATACGG
CACGATGCGG GCGATATCGG 801 CTATCTCAAA GGCCTGTTCT CCTACGGACG
CTACAAAAAC AGCATCAGCC 851 GCAGCACCGG TGCGGACGAA CATGCGGAAG
GCAGCGTCAA CGGCACGCTG 901 ATGCAGCTGG GCGCACTGGG CGGTGTCAAC
GTTCCGTTTG CCGCAACGGG 951 AGATTTGACG GTCGAAGGCG GTCTGCGCTA
CGACCTGCTC AAACAGGATG 1001 CATTCGCCGA AAAAGGCAGT GCTTTGGGCT
GGAGCGGCAA CAGCATCACT 1051 GAAGGCACAC TGGTCGGACT CGCGGGTCTG
AAGCTGTCGC AACCCTTGAG 1101 CGATAAAGCC GTCCTGTTTG CAACGGCGGG
CGTGGAACGC GACCTGAACG 1151 GACGCGACTA CACGGTAACG GGCGGCTTTA
CCGGCGCGAC TGCAGCAACC 1201 GGCAAGACGG GGGCACGCAA TATGCCGCAC
ACCCGCCTGG TTGCCGGTCT 1251 GGGCGCGGAT GTCGAATTCG GCAACGGCTG
GAACGGCTTG GCACGTTACA 1301 GCTACGCCGG TTCCAAACAG TACGGCAACC
ACAGCGGACG AGTCGGCGTA 1351 GGCTACCGGT TCTGA
This corresponds to the amino acid sequence <SEQ ID 552; ORF
140.a>:
TABLE-US-00754 a140.pep 1 MSAGGKGAGY LNRTGQRVPF LSAAKIGRDY
SFFTNIETDG GLLASLDSVE 51 KTAGSEGDTL SYYVRRGNAA RTASAAAHSA
PAGLKHAVEQ GGSNLENLMV 101 ELDASESSAT PETVETAAAD RTDMPGIRPY
GATFRAAAAV QHANAADGVR 151 IFNNLAATVY ADSTAAHADM QGRRLKAVSD
GLDHNATGLR VIAQTQQDGG 201 TWEQGGVEGK MRGSTQTVGI AAKTGENTTA
AATLGMGHST WSENSANAKT 251 DSISLFAGIR HDAGDIGYLK GLFSYGRYKN
SISRSTGADE HAEGSVNGTL 301 MQLGALGGVN VPFAATGDLT VEGGLRYDLL
KQDAFAEKGS ALGWSGNSIT 351 EGTLVGLAGL KLSQPLSDKA VLFATAGVER
DLNGRDYTVT GGFTGATAAT 401 GKTGARNMPH TRLVAGLGAD VEFGNGWNGL
ARYSYAGSKQ YGNHSGRVGV 451 GYRF* m140/a140 98.2% identity in 454 aa
overlap 10 20 30 40 50 60 m140.pep
MSARGKGAGYLNSTGRRVPFLSAAKIGQDYSFFTNIETDGGLLASLDSVEKTAGSEGDTL |||
|||||||| ||:|||||||||||:|||||||||||||||||||||||||||||||| a140
MSAGGKGAGYLNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTL 10 20
30 40 50 60 70 80 90 100 110 120 m140.pep
SYYVRRGNAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a140
SYYVRRGNAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAAD 70 80
90 100 110 120 130 140 150 160 170 180 m140.pep
RTDMPGIRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSD
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| a140
RTDMPGIRPYGATFRAAAAVQHANAADGVRIFNNLAATVYADSTAAHADMQGRRLKAVSD 130
140 150 160 170 180 190 200 210 220 230 240 m140.pep
GLDHNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRST
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||:|| a140
GLDHNATGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHST 190
200 210 220 230 240 250 260 270 280 290 300 m140.pep
WSENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a140
WSENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTL 250
260 270 280 290 300 310 320 330 340 350 360 m140.pep
MQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| a140
MQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSITEGTLVGLAGL 310
320 330 340 350 360 370 380 390 400 410 420 m140.pep
KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLGAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a140
KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLGAD 370
380 390 400 410 420 430 440 450 m140.pep
VEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRFX
||||||||||||||||||||||||||||||||||| a140
VEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRFX 430 440 450
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 553>:
TABLE-US-00755 g141.seq 1 atgagcttca aAAccgATGC CGAAACCGCC
CAATCCTCCA CCATGCGCCC 51 GATTGGCGAA ATTGCCGCCA AGCTGGGTTT
GAACGTTGAC AACATTGAGC 101 CTTACGGTCA TTACAAAGCC AAAATCAATC
CTGCCGAAGC GTTCAAGCTG 151 CCGCAAAAAC AAGGCAGGCT GATTTTGGTT
ACCGCCATCA ACCCGACTCC 201 GGCGGGCGAA GGCAAAACCA CCGTAACCAT
CGGTTTGGCG GACGCATTGC 251 GCCATATCGG CAAAGACTCT GTGATTGCTT
TGCGCGAGCC TTCTTTGGGT 301 CCGGTGTTCG GCGTGAAAGG CGGCGCGGCA
GGCGGCGGCT ACGCGCAAGT 351 TTTGCCGATG GAAGACATCA ACCTGCACTT
CACCGGCGAC TTCCACGCCA 401 TCGGTGCGGC GAATAACCTC CTCGCCGCCA
TGCTCGACAA CCATATCTAC 451 CAAGGTAACG AGTTGAACAT CGACCCCAAA
CGCGTGCTGT GGCGGCGCGT 501 GGTCGATATG AACGACCGCC AGTTGCGCAA
CATCATCGAC GGTATGGGCA 551 AGCCTGTtga cggCGTGATG CGtcccGACG
GCTTCGACAT CACCGTCGCC 601 TCCGAAGTGa tggcgGTATT CTGCCTTGCC
AAAGACATCA GCGATTTGAA 651 AGAGCGTTtt gGCAATATTC TCGTCGCCTA
CGCCAAAGAC GGCAGCCCCG 701 TTTACGCCAA AGATTTGAAG GCACACGGCG
CGATGGCGGC ATTGCTAAAA 751 GATGCGATTA AGCCCAATTT GGTGCAAACC
ATCGAAGGCA CTCCGGCCTT 801 TGTACACGGC GGCCCGTTCG CCAACATCGC
CCACGGCTGC AACTCCGTTA 851 CCGCAACCCG TCTGGCGAAA CACCTTGCCG
ATTACGCCGT AACCGAAGCA 901 GGCTTCGGCG CGGACTTGGG TGCGGAAAAA
TTCTGCGACA TCAAATGCCG 951 CCTTGCCGGT TTGAAACCTG ATGCGGCAGT
CGTCGTGGCG ACTGTCCGCG 1001 CCCTGAAATA CAACGGCGGC GTGGAACGCG
CCAACCTTGG TGAAGAAAAC 1051 CTCGAAGCCT TGGCAAAAGG TTTGCCCAAC
CTGTTGAAAC ACATTTCCAA 1101 CCTGAAAAAC GTATTCGGAC TGCCCGTCGT
CGTTGCGCTC AACCGCTTCG 1151 TGTCCGACTC CGATGCCGAG TTGGCGATGA
TTGAAAAAGC CTGTGCCGAA 1201 CACGGCGTTG AAGTTTCCCT GACCGAAGTG
TGGGGCAAAG GCGGCGCGGG 1251 CGGCGCGGAT TTGGCGCGCA AAGTCGTCAA
TGCCATCGAC AACCAACCTA 1301 ATAACTTCGG TTTCGCCTAC GATGTCGAGT
TGGGCATCAA AGACAAAATC 1351 CGTGCGATTG CCCAAAAAGT GTACGGCGCG
GAAGATGTCG ATTTCAGCGC 1401 GGAAGCGTCT GCCGAAATCG CCTCGCTGGA
AAAACTGGGC TTGGACAAAA 1451 TGCCGATCTG CATGGCGAAA ACCCAATATT
CATTGAGCGA CAACGCCAAA 1501 CTCTTGGGCT GCCCCGAAGG CTTCCGCATC
GCCGTACGCG GTATCACTGT 1551 TTCCGCCGGC GCGGGCTTCA TCGTTGCGTT
GTGCGGCAAT ATGATGAAAA 1601 TGCCGGGCCT GCCGAAAGTT CCGGCTGCCG
AGAAAATCGA TGTGGACGAA 1651 CACGGCGTGA TTCACGGCTT GTTCTGA
This corresponds to the amino acid sequence <SEQ ID 554; ORF
141.ng>:
TABLE-US-00756 g141.pep 1 MSFKTDAETA QSSTMRPIGE IAAKLGLNVD
NIEPYGHYKA KINPAEAFKL 51 PQKQGRLILV TAINPTPAGE GKTTVTIGLA
DALRHIGKDS VIALREPSLG 101 PVFGVKGGAA GGGYAQVLPM EDINLHFTGD
FHAIGAANNL LAAMLDNHIY 151 QGNELNIDPK RVLWRRVVDM NDRQLRNIID
GMGKPVDGVM RPDGFDITVA 201 SEVMAVFCLA KDISDLKERF GNILVAYAKD
GSPVYAKDLK AHGAMAALLK 251 DAIKPNLVQT IEGTPAFVHG GPFANIAHGC
NSVTATRLAK HLADYAVTEA 301 GFGADLGAEK FCDIKCRLAG LKPDAAVVVA
TVRALKYNGG VERANLGEEN 351 LEALAKGLPN LLKHISNLKN VFGLPVVVAL
NRFVSDSDAE LAMIEKACAE 401 HGVEVSLTEV WGKGGAGGAD LARKVVNAID
NQPNNFGFAY DVELGIKDKI 451 RAIAQKVYGA EDVDFSAEAS AEIASLEKLG
LDKMPICMAK TQYSLSDNAK 501 LLGCPEGFRI AVRGITVSAG AGFIVALCGN
MMKMPGLPKV PAAEKIDVDE 551 HGVIHGLF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 555>:
TABLE-US-00757 m141.seq 1 ATGAGCTTCA AAACCGATGC CGAAATCGCC
CAATCCTCCA CCATGCGCCC 51 GATTGGCGAA ATTGCCGCCA AGCTTGGTCT
GAATGCCGAC AACATTGAGC 101 CTTACGGTCA TTACAAGGCG AAAATCAATC
CTGCCGAAGC GTTCAAACTG 151 CCGCAAAAAC AGGGCAGGCT GATTTTGGTT
ACCGCCATCA ACCCGACTCC 201 GGCGGGCGAA GGCAAAACCA CCGTAACCAT
CGGTTTGGCG GACGCGTTGC 251 GCCACATCGG CAAAGATGCC GTGATTGCCC
TGCGCGAACC TTCTCTGGGG 301 CCGGTGTTCG GCGTGAAAGG CGGCGCGGCA
GGCGGCGGCT ATGCCCAAGT 351 TTTGCCGATG GAAGACATCA ACCTGCACTT
CACCGGAGAT TTTCACGCCA 401 TCGGTGCGGC AAATAATCTG CTTGCCGCGA
TGCTCGACAA CCATATCTAC 451 CAAGGCAACG AGTTGAACAT CGACCCCAAA
CGCGTGCTGT GGCGGCGCGT 501 GGTCGATATG AACGACCGCC AGTTGCGCAA
CATCATCGAC GGCATGGGTA 551 AACCCGTTGA CGGCGTGATG CGTCCTGACG
GTTTCGATAT TACCGTTGCT 601 TCCGAAGTGA TGGCGGTATT CTGTCTTGCC
AAAGACATCA GCGATTTGAA 651 AGAGCGTTTG GGCAACATCC TTGTCGCCTA
CGCCAAAGAC GGCAGCCCCG 701 TTTACGCCAA AGATTTGAAA GCGAATGGCG
CGATGGCGGC ATTGCTTAAA 751 GATGCGATTA AGCCCAACTT GGTGCAAACC
ATCGAAGGCA CGCCCGCCTT 801 CGTACACGGC GGCCCGTTCG CCAACATCGC
CCACGGCTGC AACTCCGTAA 851 CCGCAACCCG TCTGGCGAAA CACCTTGCCG
ATTACGCCGT AACCGAAGCA 901 GGCTTCGGCG CGGACTTGGG CGCGGAAAAA
TTCTGCGACA TCAAATGCCG 951 CCTTGCCGGT TTGAAACCTG ATGCGGCTGT
TGTCGTGGCG ACTGTCCGCG 1001 CGTTGAAATA TAACGGCGGC GTGGAACGCG
CCAACCTCGG CGAAGAAAAT 1051 TTAGACGCTT TGGAAAAAGG TTTGCCCAAC
CTGCTGAAAC ACATTTCCAA 1101 CCTGAAAAAC GTATTCGGAC TGCCCGTCGT
CGTTGCGCTC AACCGCTTCG 1151 TGTCCGACGC CGATGCCGAG TTGGCGATGA
TTGAAAAAGC CTGTGCCGAA 1201 CACGGCGTTG AAGTTTCCCT GACCGAAGTG
TGGGGCAAAG GTGGTGCGGG 1251 CGGCGCGGAT TTGGCGCGCA AAGTCGTCAA
CGCCATTGAA AGTCAAACCA 1301 ATAACTTCGG TTTCGCCTAC GATGTCGAGT
TGGGCATCAA AGACAAAATC 1351 CGTGCGATTG CCCAAAAAGT GTACGGCGCG
GAAGATGTTG ATTTCAGCGC 1401 GGAAGCGTCT GCCGAAATCG CTTCACTGGA
AAAACTGGGC TTGGACAAAA 1451 TGCCGATCTG CATGGCGAAA ACCCAATACT
CTTTGAGCGA CAACGCCAAA 1501 CTGTTGGGCT GCCCCGAAGA CTTCCGCATC
GCCGTGCGCG GCATCACCGT 1551 TTCCGCAGGC GCAGGTTTCA TCGTCGCCCT
GTGCGGCAAC ATGATGAAAA 1601 TGCCCGGCCT GCCCAAAGTT CCGGCTGCCG
AGAAAATCGA TGTGGACGCA 1651 GAAGGCGTGA TTCACGGCTT GTTCTGA
This corresponds to the amino acid sequence <SEQ ID 556; ORF
141>:
TABLE-US-00758 m141.pep 1 MSFKTDAEIA QSSTMRPIGE IAAKLGLNAD
NIEPYGHYKA KINPAEAFKL 51 PQKQGRLILV TAINPTPAGE GKTTVTIGLA
DALRHIGKDA VIALREPSLG 101 PVFGVKGGAA GGGYAQVLPM EDINLHFTGD
FHAIGAANNL LAAMLDNHIY 151 QGNELNIDPK RVLWRRVVDM NDRQLRNIID
GMGKPVDGVM RPDGFDITVA 201 SEVMAVFCLA KDISDLKERL GNILVAYAKD
GSPVYAKDLK ANGAMAALLK 251 DAIKPNLVQT IEGTPAFVHG GPFANIAHGC
NSVTATRLAK HLADYAVTEA 301 GFGADLGAEK FCDIKCRLAG LKPDAAVVVA
TVRALKYNGG VERANLGEEN 351 LDALEKGLPN LLKHISNLKN VFGLPVVVAL
NRFVSDADAE LAMIEKACAE 401 HGVEVSLTEV WGKGGAGGAD LARKVVNAIE
SQTNNFGFAY DVELGIKDKI 451 RAIAQKVYGA EDVDFSAEAS AEIASLEKLG
LDKMPICMAK TQYSLSDNAK 501 LLGCPEDFRI AVRGITVSAG AGFIVALCGN
MMKMPGLPKV PAAEKIDVDA 551 EGVIHGLF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 141
shows 97.5% identity over a 558 aa overlap with a predicted ORF
(ORF 141.ng) from N. gonorrhoeae:
TABLE-US-00759 m141/g141 10 20 30 40 50 60 m141.pep
MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINPAEAFKLPQKQGRLILV
|||||||| |||||||||||||||||||:||||||||||||||||||||||||||||||| g141
MSFKTDAETAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINPAEAFKLPQKQGRLILV 10 20
30 40 50 60 70 80 90 100 110 120 m141.pep
TAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPVFGVKGGAAGGGYAQVLPM
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g141
TAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPVFGVKGGAAGGGYAQVLPM 70 80
90 100 110 120 130 140 150 160 170 180 m141.pep
EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g141
EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID 130
140 150 160 170 180 190 200 210 220 230 240 m141.pep
GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLK
|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||| g141
GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERFGNILVAYAKDGSPVYAKDLK 190
200 210 220 230 240 250 260 270 280 290 300 m141.pep
ANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g141
AHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA 250
260 270 280 290 300 310 320 330 340 350 360 m141.pep
GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLDALEKGLPN
|||||||||||||||||||||||||||||||||||||||||||||||||||:|| ||||| g141
GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLEALAKGLPN 310
320 330 340 350 360 370 380 390 400 410 420 m141.pep
LLKHISNLKNVFGLPVVVALNRFVSDADAELAMIEKACAEHGVEVSLTEVWGKGGAGGAD
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| g141
LLKHISNLKNVFGLPVVVALNRFVSDSDAELAMIEKACAEHGVEVSLIEVWGKGGAGGAD 370
380 390 400 410 420 430 440 450 460 470 480 m141.pep
LARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG
|||||||||::| ||||||||||||||||||||||||||||||||||||||||||||||| g141
LARKVVNAIDNQPNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG 430
440 450 460 470 480 490 500 510 520 530 540 m141.pep
LDKMPICMAKTQYSLSDNAKLLGCPEDFRIAVRGITVSAGAGFIVALCGNMMKMPGLPKV
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| g141
LDKMPICMAKTQYSLSDNAKLLGCPEGFRIAVRGITVSAGAGFIVALCGNMMKMPGLPKV 490
500 510 520 530 540 550 559 m141.pep PAAEKIDVDAEGVIHGLFX |||||||||
:|||||||| g141 PAAEKIDVDEHGVIHGLFX 550
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 557>:
TABLE-US-00760 a141.seq 1 ATGAGTTTCA AAACCGATGC CGAAATCGCC
CAATCCTCCA CCATGCGCCC 51 GATTGGCGAA ATTGCCGCCA AGCTGGGTTT
GAACGTTGAC AACATTGAGC 101 CTTACGGTCA TTACAAAGCC AAAATCAATC
CTGCCGAAGC GTTCAAACTG 151 CCGCAAAAAC AGGGCAGGCT GATTTTGGTT
ACCGCCATCA ACCCGACTCC 201 GGCGGGCGAA GGTAAAACCA CCGTAACCAT
CGGTTTGGCG GACGCATTGC 251 GCCATATCGG CAAAGACTCT GTGATTGCTT
TGCGCGAGCC TTCTTTGGGT 301 CCGGTGTTCG GCGTGAAAGG CGGCGCGGCA
GGCGGCGGCT ATGCCCAAGT 351 TTTGCCGATG GAAGACATCA ACCTGCACTT
CACCGGAGAT TTTCACGCCA 401 TCGGTGCGGC AAATAATCTG CTTGCCGCGA
TGCTCGACAA CCATATCTAC 451 CAAGGCAACG AGTTGAACAT CGACCCCAAA
CGCGTGCTGT GGCGGCGCGT 501 GGTCGATATG AACGACCGCC AGTTGCGCAA
CATCATCGAC GGCATGGGCA 551 AGCCTGTTGA CGGCGTGATG CGTCCTGACG
GTTTCGATAT TACCGTTGCT 601 TCCGAAGTGA TGGCGGTATT CTGTCTTGCC
AAAGACATCA GCGATTTGAA 651 AGAGCGTTTG GGCAACATCC TTGTCGCCTA
CGCCAAAGAC GGCAGCCCCG 701 TTTACGCCAA AGATTTGAAA GCGAATGGCG
CGATGGCGGC ATTGCTTAAA 751 GATGCGATTA AGCCCAACTT GGTGCAAACC
ATCGAAGGCA CGCCCGCCTT 801 CGTACACGGC GGCCCGTTCG CCAACATCGC
CCACGGCTGC AACTCCGTAA 851 CCGCAACCCG TCTGGCGAAA CACCTTGCCG
ATTACGCCGT AACCGAAGCA 901 GGCTTCGGCG CGGACTTGGG CGCGGAAAAA
TTCTGCGACA TCAAATGCCG 951 CCTTGCCGGT TTGAAACCTG ATGCGGCTGT
TGTCGTGGCG ACTGTCCGCG 1001 CGTTGAAATA TAACGGCGGC GTGGAACGCG
CCAACCTCGG CGAAGAAAAT 1051 TTAGACGCTT TGGAAAAAGG TTTGCCCAAC
CTGCTGAAAC ACATTTCCAA 1101 CCTGAAAAAC GTATTCGGAC TGCCCGTCGT
CGTTGCGCTC AACCGCTTCG 1151 TGTCCGACTC CGATGCCGAG TTGGCGATGA
TTGAAAAAGC CTGTGCCGAA 1201 CACGGCGTTG AAGTTTCCCT GACCGAAGTG
TGGGGCAAAG GTGGTGCGGG 1251 CGGCGCGGAT TTGGCGCGCA AAGTCGTCAA
CGCCATTGAA AGTCAAACCA 1301 ATAACTTCGG TTTCGCCTAC GATGTCGAGT
TGGGCATCAA AGACAAAATC 1351 CGTGCGATTG CCCAAAAAGT GTACGGCGCG
GAAGATGTTG ATTTCAGCGC 1401 GGAAGCGTCT GCCGAAATCG CTTCACTGGA
AAAACTGGGC TTGGACAAAA 1451 TGCCGATCTG CATGGCGAAA ACCCAATACT
CTTTGAGCGA CAACGCCAAA 1501 CTGTTGGGCT GCCCCGAAGA CTTCCGCATC
GCCGTGCGCG GCATCACCGT 1551 TTCCGCAGGC GCAGGTTTCA TCGTCGCCCT
GTGCGGCAAC ATGATGAAAA 1601 TGCCCGGCCT GCCCAAAGTT CCGGCTGCCG
AGAAAATCGA TGTGGACGCA 1651 GAAGGCGTGA TTCACGGCTT GTTCTGA
This corresponds to the amino acid sequence <SEQ ID 558; ORF
141.a>:
TABLE-US-00761 a141.pep 1 MSFKTDAEIA QSSTMRPIGE IAAKLGLNVD
NIEPYGHYKA KINPAEAFKL 51 PQKQGRLILV TAINPTPAGE GKTTVTIGLA
DALRHIGKDS VIALREPSLG 101 PVFGVKGGAA GGGYAQVLPM EDINLHFTGD
FHAIGAANNL LAAMLDNHIY 151 QGNELNIDPK RVLWRRVVDM NDRQLRNIID
GMGKPVDGVM RPDGFDITVA 201 SEVMAVFCLA KDISDLKERL GNILVAYAKD
GSPVYAKDLK ANGAMAALLK 251 DAIKPNLVQT IEGTPAFVHG GPFANIAHGC
NSVTATRLAK HLADYAVTEA 301 GFGADLGAEK FCDIKCRLAG LKPDAAVVVA
TVRALKYNGG VERANLGEEN 351 LDALEKGLPN LLKHISNLKN VFGLPVVVAL
NRFVSDSDAE LAMIEKACAE 401 HGVEVSLTEV WGKGGAGGAD LARKVVNAIE
SQTNNFGFAY DVELGIKDKI 451 RAIAQKVYGA EDVDFSAEAS AEIASLEKLG
LDKMPICMAK TQYSLSDNAK 501 LLGCPEDFRI AVRGITVSAG AGFIVALCGN
MMKMPGLPKV PAAEKIDVDA 551 EGVIHGLF* m141/a141 99.5% identity in 558
aa overlap 10 20 30 40 50 60 m141.pep
MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINPAEAFKLPQKQGRLILV
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| a141
MSFKTDAEIAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINPAEAFKLPQKQGRLILV 10 20
30 40 50 60 70 80 90 100 110 120 m141.pep
TAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPVFGVKGGAAGGGYAQVLPM
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| a141
TAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPVFGVKGGAAGGGYAQVLPM 70 80
90 100 110 120 130 140 150 160 170 180 m141.pep
EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID 130
140 150 160 170 180 190 200 210 220 230 240 m141.pep
GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLK 190
200 210 220 230 240 250 260 270 280 290 300 m141.pep
ANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
ANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA 250
260 270 280 290 300 310 320 330 340 350 360 m141.pep
GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLDALEKGLPN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
GFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRALKYNGGVERANLGEENLDALEKGLPN 310
320 330 340 350 360 370 380 390 400 410 420 m141.pep
LLKHISNLKNVFGLPVVVALNRFVSDADAELAMIEKACAEHGVEVSLTEVWGKGGAGGAD
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a141
LLKHISNLKNVFGLPVVVALNRFVSDSDAELAMIEKACAEHGVEVSLIEVWGKGGAGGAD 370
380 390 400 410 420 430 440 450 460 470 480 m141.pep
LARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
LARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG 430
440 450 460 470 480 490 500 510 520 530 540 m141.pep
LDKMPICMAKTQYSLSDNAKLLGCPEDFRIAVRGITVSAGAGFIVALCGNMMKMPGLPKV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a141
LDKMPICMAKTQYSLSDNAKLLGCPEDFRIAVRGITVSAGAGFIVALCGNMMKMPGLPKV 490
500 510 520 530 540 550 559 m141.pep PAAEKIDVDAEGVIHGLFX
||||||||||||||||||| a141 PAAEKIDVDAEGVIHGLFX 550
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 559>:
TABLE-US-00762 g142.seq 1 ATGCGTGCCG ATTTCATGTT TGCCGACAAT
ATGCCCGTGC AGGTGCGCCA 51 ACGCGCCTTC TATTTCAAGT TGTCCCGTTT
TGCCGCGATG CCAAATATGG 101 TAGGCAAACC GCTCTTCGGG CGACAGGCCG
GTCAGCCCGG CAAAATGTTC 151 GGCAACATCC TGATGTTCGT CCGCCAGCAT
ATTGATGCAG AGgCTGCCGT 201 TTTCCGACAG GATcggaATG AttcgCGCAC
TCCGGTTTAT GCACAGCATC 251 ACGGTCGGCG GCTCGTCGGT AACCGGCGCA
ACCGCCGTCA TTGTAATGCC 301 GTAACGCCCT GCCGCACCGT CTGTCGTGAT
GACATGAACG CCTGCCGCAC 351 AGGATGCCAT CGCATCACGG AACGAAGTTT
GAAAAGTTTT CTGCAAATCC 401 GCCATTTTTC CCCTTTAAAC CGTCCCCTAT
ATAAGAATGC TGCACACAAG 451 GCATCCCCCC ATGTGCAGCA GTTCTGA
This corresponds to the amino acid sequence <SEQ ID 560; ORF
142.ng>:
TABLE-US-00763 g142.pep 1 MRADFMFADN MPVQVRQRAF YFKLSRFAAM
PNMVGKPLFG RQAGQPGKMF 51 GNILMFVRQH IDAEAAVFRQ DRNDSRTPVY
AQHHGRRLVG NRRNRRHCNA 101 VTPCRTVCRD DMNACRTGCH RITERSLKSF
LQIRHFSPLN RPLYKNAAHK 151 ASPHVQQF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 561>:
TABLE-US-00764 m142.seq 1 ATGCGTGCCG ATTTCATGTT TGCCGACAAT
ATGCCCGTGC AGGTGCGCCA 51 ACGCGCCCTC TATTTCAAGT TGTCCCGTTT
TGCCGCGATG CCAGATGTGG 101 TAGGCAAACC GCTCTTCGGG CGACAGGCCG
GTCAGCCCGG CAAAATGTTC 151 GGCAACATCC TGATGTTCGT CCGCCAGCGT
ATTGATGCAG AGGCTGCCGT 201 TTTCCGACAG GATCGGAATG ATTCGCGCAC
TCCGGTTGAT GCACAGCATC 251 ACGGTCGGCG GCTCGTCGGT AACCGGCGCG
ACCGCCGTCA TTGTAATGCC 301 GTAACGCCCT GCCGCACCGT CTGTCGTGAT
GACATGAACG CCTGCCGCGC 351 AAGATGCCAT CGCATCACGG AACGAAGTTT
GAAAATTTTT CTGCAAATCC 401 GCCATTTTTC CCCTTTAAAC TGTCCCCTAT
ATAAGAATGC TGCACACAAG 451 GCATCCCCcC ATGTGCAGCA GTTTTGA
This corresponds to the amino acid sequence <SEQ ID 562; ORF
142>:
TABLE-US-00765 m142.pep 1 MRADFMFADN MPVQVRQRAL YFKLSRFAAM
PDVVGKPLFG RQAGQPGKMF 51 GNILMFVRQR IDAEAAVFRQ DRNDSRTPVD
AQHHGRRLVG NRRDRRHCNA 101 VTPCRTVCRD DMNACRARCH RITERSLKIF
LQIRHFSPLN CPLYKNAAHK 151 ASPHVQQF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 142
shows 93.7% identity over a 158 aa overlap with a predicted ORF
(ORF 142.ng) from N. gonorrhoeae:
TABLE-US-00766 m142/g142 10 20 30 40 50 60 m142.pep
MRADFMFADNMPVQVRQRALYFKLSRFAAMPDVVGKPLFGRQAGQPGKMFGNILMFVRQR
|||||||||||||||||||:|||||||||||::||||||||||||||||||||||||||: g142
MRADFMFADNMPVQVRQRAFYFKLSRFAAMPNMVGKPLFGRQAGQPGKMFGNILMFVRQH 10 20
30 40 50 60 70 80 90 100 110 120 m142.pep
IDAEAAVFRQDRNDSRTPVDAQHHGRRLVGNRRDRRHCNAVTPCRTVCRDDMNACRARCH
||||||||||||||||||| |||||||||||||:||||||||||||||||||||||: || g142
IDAEAAVFRQDRNDSRTPVYAQHHGRRLVGNRRNRRHCNAVTPCRTVCRDDMNACRTGCH 70 80
90 100 110 120 130 140 150 159 m142.pep
RITERSLKIFLQIRHFSPLNCPLYKNAAHKASPHVQQFX |||||||| |||||||||||
|||||||||||||||||| g142 RITERSLKSFLQIRHFSPLNRPLYKNAAHKASPHVQQFX 130
140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 563>:
TABLE-US-00767 a142.seq 1 ATGCGTGCCG ATTTCATGTT TGCCGACAAT
ATGCCCGTGC AGGTGCGCCA 51 ACGCGCCCTC TATTTCAAGT TGTCCCGTTT
TGCCGCGATG CCAGATGTGG 101 TAGGCAAACC GCTCTTCGGG CGACAGGCCG
GTCAGCCCGG CAAAATGTTC 151 GGCAACATCC TGATGTTCGT CCGCCAGCGT
ATTGATGCAG AGGCTGCCGT 201 TTTCCGACAG GATCGGAATG ATTCGCGCAC
TCCGGTTGAT GCACAGCATC 251 ACGGTCGGCG GCTCGTCCGT AACCGGCGCA
ACCGCCGTCA TTGTAATGCC 301 GTAACGCCCT GCCGCACCGT CTGTCGTGAT
GACATGAACG CCTGCCGCAC 351 AGGATGCCAT CGCATCACGG AACGAAGTTT
GAAAAGTTTT CTGCAAATCC 401 GCCATTTTTC CCCTTTAAAC TGTCCCCTAT
ATAAGAATGC TGCACACAAG 451 GCACCCCCCA TGTGCAGCAG TTCTGATTCA
AAAAGCCGTC GGTCGGACAT 501 TTCCGCGCGT TACGGCGTAT TACGAGTTCA
ACGCATCCTC GATTTTGGCA 551 AGTTCTGCCA ACAGGTCTTT AAGCAGCAGC
ATTTTCTCGC GGCCCAGCAC 601 TTCCTCGATA GCGTCGTAAC GCTCGTCCAC
TTCTTCGCCG ATTTCCTCAT 651 ACAGCTTCTC GCCCTCGGCA GTCAGCTTCA
GAAAAACACG TCGTTGGTCG 701 TTGGAAGGTT TCAGGCGGAC AACCAAACCC
GCTTTTTCAA GGCGGGTCAG 751 GATACCGGTC AGGCTGGGGC GCAAAATGCA
CGCCTGATTC GCCAAATCTT 801 GAAAGTCCAG CGTGCCGTTT TCCGCCAAAA
GACGGATAAT CCGCCATTGC 851 TGATCGGTAA TATTCGCCTG ATTCAGAATA
GGCCTGAATT GGGTCATCAG 901 GGCTTCCCTT GCCTGTATCA GACCGATATT
GATAGACGCA TGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 564; ORF
142.a>:
TABLE-US-00768 a142.pep 1 MRADFMFADN MPVQVRQRAL YFKLSRFAAM
PDVVGKPLFG RQAGQPGKMF 51 GNILMFVRQR IDAEAAVFRQ DRNDSRTPVD
AQHHGRRLVR NRRNRRHCNA 101 VTPCRTVCRD DMNACRTGCH RITERSLKSF
LQIRHFSPLN CPLYKNAAHK 151 APPMCSSSDS KSRRSDISAR YGVLRVQRIL
DFGKFCQQVF KQQHFLAAQH 201 FLDSVVTLVH FFADFLIQLL ALGSQLQKNT
SLVVGRFQAD NQTRFFKAGQ 251 DTGQAGAQNA RLIRQILKVQ RAVFRQKTDN
PPLLIGNIRL IQNRPELGHQ 301 GFPCLYQTDI DRRMF* m142/a142 96.1%
identity in 153 aa overlap 10 20 30 40 50 60 m142.pep
MRADFMFADNMPVQVRQRALYFKLSRFAAMPDVVGKPLFGRQAGQPGKMFGNILMFVRQR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a142
MRADFMFADNMPVQVRQRALYFKLSRFAAMPDVVGKPLFGRQAGQPGKMFGNILMFVRQR 10 20
30 40 50 60 70 80 90 100 110 120 m142.pep
IDAEAAVFRQDRNDSRTPVDAQHHGRRLVGNRRDRRHCNAVTPCRTVCRDDMNACRARCH
||||||||||||||||||||||||||||| |||:||||||||||||||||||||||: || a142
IDAEAAVFRQDRNDSRTPVDAQHHGRRLVRNRRNRRHCNAVTPCRTVCRDDMNACRTGCH 70 80
90 100 110 120 130 140 150 159 m142.pep
RITERSLKIFLQIRHFSPLNCPLYKNAAHKASPHVQQFX ||||||||
|||||||||||||||||||||| | a142
RITERSLKSFLQIRHFSPLNCPLYKNAAHKAPPMCSSSDSKSRRSDISARYGVLRVQRIL 130
140 150 160 170 180 a142
DFGKFCQQVFKQQHFLAAQHFLDSVVTLVHFFADFLIQLLALGSQLQKNTSLVVGRFQAD 190
200 210 220 230 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 565>:
TABLE-US-00769 g143.seq 1 ATGTTGAGCT TCGGCTATCT CGGCGTTCAG
ACGGCCTTTA CCCTGCAAAG 51 CTCGCAGATG AGCCGCATTT TTCAAACGCT
AGGCGCAGAC CCGCACAATT 101 TGGGCTGGTT TTTCATCCTG CCGCCGCTGG
CGGGGATGCT GGTTCAGCCG 151 ATAGTGgGCT ACTACTCAGA CCGCACTTGG
AAGCCGCGCT TGGGCGGCCG 201 CCGCCTGCCG TATCTGCTTT ACGGCACGCT
GATTGCGGTC ATCGTGATGA 251 TTTTGATGCC GAACTCGGGC AGCTTCGGTT
TCGGCTATGC GTCGCTGGCG 301 GCCTTGTCGT TCGGCGCGCT GATGATTGCG
CTGTTGGACG TGTCGTCGAA 351 TATGGCGATG CAGCCGTTTA AGATGATGGT
CGGCGATATG GTCAACGAGG 401 AGCAGAAAAG CTACGCCTAC GGGATTCAAA
GTTTCTTAGC GAATACGGAC 451 GCGGTTGTGG CAGCGATTCT GCCGTTTGTG
TTcgcgtata TCGGTTTGGC 501 GAACACTGCC GAGAAAGGCG TTGTGCCACA
AACCGTGGTC GTAGCATTCT 551 ATGTGGGTGC GGCGTTACTG ATTATTACCA
GTGCGTTCAC AATCTCCAAA 601 GTCAAAGAAT ACGACCCGGA AACCTACGCC
CGTTACCACG GCATCGATGT 651 CGCCGCGAAT CAGGAAAAAG CCAACTGGTT
CGAACTCTTA AAAACCGCGC 701 CTAAAGTGTT TTGGACGGTT ACTCCGGTAC
AGTTTTTCTG CTGGTTCGCC 751 TTCCGGTATA TGTGGACTTA CTCGGCAGGC
GCGATTGCAG AAAACGTCTG 801 GCACACTACC GATGCGTCTT CCGTAGGCCA
TCAGGAGGCG GGCAACCGGT 851 ACGGCGTTTT GGCGGCGGTG TAGTCGGTTG
CGGCGGTGAT TTGTTCGTTT 901 ATTCTGGCAA AAGTACCGAA TAAATACCAT
AAGGCGGGTT ATTTCGGCTG 951 TTTGGCTTTG GGCGCGCTCG GTTTCTTCTC
TATCTTCTTC ATCTACAATC 1001 AATACGCACT CATCCTGTCT TATATCTTAA
TCGGCATCGC TTGGGCGGGC 1051 ATTATCACTT ATCCGCTGAC GATTGTGGCC
AACGCTTTGT CGGGCAAACA 1101 CATGGATACT TATTTGGGCC TGTttaacgg
ctctgtCTGT ATGCcgcaaa 1151 tcgTcgctTC GctgttgAGT TTCGTGCTTT
TCCCGATGCT GGGCGGCCAT 1201 CAGGCAACCA TGTTCTTGGT TGCAGGCGCA
GTCTTGCTGC TGGGAGCCTT 1251 CTCAGTCTGT CTGATTAAAG AGATCCACGG
CGGGGTTTGA
This corresponds to the amino acid sequence <SEQ ID 566; ORF
143.ng>:
TABLE-US-00770 g143.pep 1 MLSFGYLGVQ TAFTLQSSQM SRIFQTLGAD
PHNLGWFFIL PPLAGMLVQP 51 IVGYYSDRTW KPRLGGRRLP YLLYGTLIAV
IVMILMPNSG SFGFGYASLA 101 ALSFGALMIA LLDVSSNMAM QPFKMMVGDM
VNEEQKSYAY GIQSFLANTD 151 AVVAAILPFV FAYIGLANTA EKGVVPQTVV
VAFYVGAALL IITSAFTISK 201 VKEYDPETYA RYHGIDVAAN QEKANWFELL
KTAPKVFWTV TPVQFFCWFA 251 FRYMWTYSAG AIAENVWHTT DASSVGHQEA
GNRYGVLAAV *SVAAVICSF 301 ILAKVPNKYH KAGYFGCLAL GALGFFSIFF
IYNQYALILS YILIGIAWAG 351 IITYPLTIVA NALSGKHMDT YLGLFNGSVC
MPQIVASLLS FVLFPMLGGH 401 QATMFLVAGA VLLLGAFSVC LIKEIHGGV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 567>:
TABLE-US-00771 m143.seq 1 ATGCTCAGTT TCGGCTTTCT CGGCGTTCAG
ACGGCCTTTA CCCTGCAAAG 51 CTCGCAAATG AGCCGCATTT TTCAAACGCT
AGGCGCAGAC CCGCACAATT 101 TGGGCTGGTT TTTCATCCTG CCGCCGCTGG
CGGGGATGCT GGTGCAGCCG 151 ATTGTCGGCC ATTACTCCGA CCGCACTTGG
AAGCCGCGTT TGGGCGGCCG 201 CCGTCTGCCG TATCTGCTTT ATGGCACGCT
GATTGCGGTT ATTGTGATGA 251 TTTTGATGCC GAACTCGGGC AGCTTCGGTT
TCGGCTATGC GTCGCTGGCG 301 GCTTTGTCGT TCGGCGCGCT GATGATTGCG
CTGTTAGACG TGTCGTCAAA 351 TATGGCGATG CAGCCGTTTA AGATGATGGT
CGGCGACATG GTCAACGAGG 401 AGCAGAAAGG CTACGCCTAC GGGATTCAAA
GTTTCTTAGC AAATACGGGC 451 GCGGTCGTGG CGGCGATTCT GCCGTTTGTG
TTTGCGTATA TCGGTTTGGC 501 GAACACCGCC GAGAAAGGCG TTGTGCCGCA
GACCGTGGTC GTGGCGTTTT 551 ATGTGGGTGC GGCGTTGCTG GTGATTACCA
GCGCGTTCAC GATTTTCAAA 601 GTGAAGGAAT ACGATCCGGA AACCTACGCC
CGTTACCACG GCATCGATGT 651 CGCCGCGAAT CAGGAAAAAG CCAACTGGAT
CGAACTCTTG AAAACCGCGC 701 CTAAGGCGTT TTGGACGGTT ACTTTGGTGC
AATTCTTCTG CTGGTTCGCC 751 TTCCAATATA TGTGGACTTA CTCGGCAGGC
GCGATTGCGG AAAACGTCTG 801 GCACACCACC GATGCGTCTT CCGTAGGTTA
TCAGGAGGCG GGTAACTGGT 851 ACGGCGTTTT GGCGGCGGTG CAGTCGGTTG
CGGCGGTGAT TTGTTCGTTT 901 GTATTGGCGA AAGTGCCGAA TAAATACCAT
AAGGCGGGTT ATTTCGGCTG 951 TTTGGCTTTG GGCGCGCTCG GCTTTTTCTC
CGTTTTCTTC ATCGGCAACC 1001 AATACGCGCT GGTGTTGTCT TATACCTTAA
TCGGCATCGC TTGGGCGGGC 1051 ATTATCACTT ATCCGCTGAC GATTGTGACC
AACGCCTTGT CGGGCAAGCA 1101 TATGGGCACT TACTTGGGCT TGTTTAACGG
CTCTATCTGT ATGCCTCAAA 1151 TCGTCGCTTC GCTGTTGAGT TTCGTGCTTT
TCCCTATGCT GGGCGGCTTG 1201 CAGGCCACTA TGTTCTTGGT AGGGGGCGTC
GTCCTGCTGC TGGGCGCGTT 1251 TTCCGTGTTC CTGATTAAAG AAACACACGG
CGGGGTTTGA
This corresponds to the amino acid sequence <SEQ ID 568; ORF
143>:
TABLE-US-00772 m143.pep 1 MLSFGFLGVQ TAFTLQSSQM SRIFQTLGAD
PHNLGWFFIL PPLAGMLVQP 51 IVGHYSDRTW KPRLGGRRLP YLLYGTLIAV
IVMILMPNSG SFGFGYASLA 101 ALSFGALMIA LLDVSSNMAM QPFKMMVGDM
VNEEQKGYAY GIQSFLANTG 151 AVVAAILPFV FAYIGLANTA EKGVVPQTVV
VAFYVGAALL VITSAFTIFK 201 VKEYDPETYA RYHGIDVAAN QEKANWIELL
KTAPKAFWTV TLVQFFCWFA 251 FQYMWTYSAG AIAENVWHTT DASSVGYQEA
GNWYGVLAAV QSVAAVICSF 301 VLAKVPNKYH KAGYFGCLAL GALGFFSVFF
IGNQYALVLS YTLIGIAWAG 351 IITYPLTIVT NALSGKHMGT YLGLFNGSIC
MPQIVASLLS FVLFPMLGGL 401 QATMFLVGGV VLLLGAFSVF LIKETHGGV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00773 m143/g143 93.9% identity in 429 aa overlap 10 20 30
40 50 60 m143.pep
MLSFGFLGVQTAFTLQSSQMSRIFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTW
|||||:|||||||||||||||||||||||||||||||||||||||||||||||:|||||| g143
MLSFGYLGVQTAFTLQSSQMSRIFQTLGADPHNLGWFFILPPLAGMLVQPIVGYYSDRTW 10 20
30 40 50 60 70 80 90 100 110 120 m143.pep
KPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g143
KPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAM 70 80
90 100 110 120 130 140 150 160 170 180 m143.pep
QPFKMMVGDMVNEEQKGYAYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVV
||||||||||||||||:|||||||||||| |||||||||||||||||||||||||||||| g143
QPFKMMVGDMVNEEQKSYAYGIQSFLANTDAVVAAILPFVFAYIGLANTAEKGVVPQTVV 130
140 150 160 170 180 190 200 210 220 230 240 m143.pep
VAFYVGAALLVITSAFTIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTV
||||||||||:||||||| |||||||||||||||||||||||||||:||||||||:|||| g143
VAFYVGAALLIITSAFTISKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKVFWTV 190
200 210 220 230 240 250 260 270 280 290 300 m143.pep
TLVQFFCWFAFQYMWTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSF |
|||||||||:||||||||||||||||||||||||:||||| ||||||| ||||||||| g143
TPVQFFCWFAFRYMWTYSAGAIAENVWHTTDASSVGHQEAGNRYGVLAAVXSVAAVICSF 250
260 270 280 290 300 310 320 330 340 350 360 m143.pep
VLAKVPNKYHKAGYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVT
:||||||||||||||||||||||||||:||| |||||:||| |||||||||||||||||: g143
ILAKVPNKYHKAGYFGCLALGALGFFSIFFIYNQYALILSYILIGIAWAGIITYPLTIVA 310
320 330 340 350 360 370 380 390 400 410 420 m143.pep
NALSGKHMGTYLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVF
|||||||| |||||||||:|||||||||||||||||||| |||||||:|:||||||||| g143
NALSGKHMDTYLGLFNGSVCMPQIVASLLSFVLFPMLGGHQATMFLVAGAVLLLGAFSVC 370
380 390 400 410 420 430 m143.pep LIKETHGGVX |||| ||||| g143
LIKEIHGGVX 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 569>:
TABLE-US-00774 a143.seq 1 ATGCTCAGTT TCGGCTTTCT CGGCGTTCAG
ACGGCCTTTA CCCTGCAAAG 51 CTCGCAGATG AGCCGCATCT TCCAGACGCT
CGGTGCCGAT CCGCACAGCC 101 TCGGCTGGTT CTTTATCCTG CCGCCGCTGG
CGGGGATGCT GGTGCAGCCG 151 ATTGTCGGCC ATTACTCCGA CCGCACTTGG
AAGCCGCGTT TGGGCGGCCG 201 CCGTCTGCCG TATCTGCTTT ATGGCACGCT
GATTGCGGTT ATTGTGATGA 251 TTTTGATGCC GAACTCGGGC AGCTTCGGTT
TCGGCTATGC GTCGCTGGCG 301 GCTTTGTCGT TCGGCGCGCT GATGATTGCG
CTGTTAGACG TGTCGTCAAA 351 TATGGCGATG CAGCCGTTTA AGATGATGGT
CGGCGACATG GTCAACGAGG 401 AGCAGAAAGG CTACGCCTAC GGGATTCAAA
GTTTCTTAGC GAATACGGGC 451 GCGGTCGTGG CGGCGATTCT GCCGTTTGTG
TTTGCGTATA TCGGTTTGGC 501 GAACACCGCC GAGAAAGGCG TTGTGCCGCA
GACCGTGGTC GTGGCGTTTT 551 ATGTGGGTGC GGCGTTGCTG GTGATTACCA
GCGCGTTCAC GATTTTCAAA 601 GTGAAGGAAT ACAATCCGGA AACCTACGCC
CGTTACCACG GCATCGATGT 651 CGCCGCGAAT CAGGAAAAAG CCAACTGGAT
CGAACTCTTG AAAACCGCGC 701 CTAAGGCGTT TTGGACGGTT ACTTTGGTGC
AATTCTTCTG CTGGTTCGCC 751 TTCCAATATA TGTGGACTTA CTCGGCAGGC
GCGATTGCGG AAAACGTCTG 801 GCACACCACC GATGCGTCTT CCGTAGGTTA
TCAGGAGGCG GGTAACTGGT 851 ACGGCGTTTT GGCGGCGGTG CAGTCGGTTG
CGGCGGTGAT TTGTTCGTTT 901 GTATTGGCGA AAGTGCCGAA TAAATACCAT
AAGGCGGGTT ATTTCGGCTG 951 TTTGGCTTTG GGCGCGCTCG GCTTTTTCTC
CGTTTTCTTC ATCGGCAACC 1001 AATACGCGCT GGTGTTGTCT TATACCTTAA
TCGGCATCGC TTGGGCGGGC 1051 ATTATCACTT ATCCGCTGAC GATTGTGACC
AACGCCTTGT CGGGCAAGCA 1101 TATGGGCACT TACTTGGGCC TGTTTAACGG
CTCTATCTGT ATGCCGCAAA 1151 TCGTCGCTTC GCTGTTGAGT TTCGTGCTTT
TCCCTATGCT GGGCGGCTTG 1201 CAGGCCACTA TGTTCTTGGT AGGGGGCGTC
GTCCTGCTGC TGGGCGCGTT 1251 TTCCGTGTTC CTGATTAAAG AAACACACGG
CGGGGTTTGA
This corresponds to the amino acid sequence <SEQ ID 570; ORF
143.a>:
TABLE-US-00775 a143.pep 1 MLSFGFLGVQ TAFTLQSSQM SRIFQTLGAD
PHSLGWFFIL PPLAGMLVQP 51 IVGHYSDRTW KPRLGGRRLP YLLYGTLIAV
IVMILMPNSG SFGFGYASLA 101 ALSFGALMIA LLDVSSNMAM QPFKMMVGDM
VNEEQKGYAY GIQSFLANTG 151 AVVAAILPFV FAYIGLANTA EKGVVPQTVV
VAFYVGAALL VITSAFTIFK 201 VKEYNPETYA RYHGIDVAAN QEKANWIELL
KTAPKAFWTV TLVQFFCWFA 251 FQYMWTYSAG AIAENVWHTT DASSVGYQEA
GNWYGVLAAV QSVAAVICSF 301 VLAKVPNKYH KAGYFGCLAL GALGFFSVFF
IGNQYALVLS YTLIGIAWAG 351 IITYPLTIVT NALSGKHMGT YLGLFNGSIC
MPQIVASLLS FVLFPMLGGL 401 QATMFLVGGV VLLLGAFSVF LIKETHGGV*
m143/a143 99.5% identity in 429 aa overlap 10 20 30 40 50 60
m143.pep
MLSFGFLGVQTAFTLQSSQMSRIFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTW
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| a143
MLSFGFLGVQTAFTLQSSQMSRIFQTLGADPHSLGWFFILPPLAGMLVQPIVGHYSDRTW 10 20
30 40 50 60 70 80 90 100 110 120 m143.pep
KPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a143
KPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAM 70 80
90 100 110 120 130 140 150 160 170 180 m143.pep
QPFKMMVGDMVNEEQKGYAYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a143
QPFKMMVGDMVNEEQKGYAYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVV 130
140 150 160 170 180 190 200 210 220 230 240 m143.pep
VAFYVGAALLVITSAFTIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTV
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| a143
VAFYVGAALLVITSAFTIFKVKEYNPETYARYHGIDVAANQEKANWIELLKTAPKAFWTV 190
200 210 220 230 240 250 260 270 280 290 300 m143.pep
TLVQFFCWFAFQYMWTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a143
TLVQFFCWFAFQYMWTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSF 250
260 270 280 290 300 310 320 330 340 350 360 m143.pep
VLAKVPNKYHKAGYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a143
VLAKVPNKYHKAGYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVT 310
320 330 340 350 360 370 380 390 400 410 420 m143.pep
NALSGKHMGTYLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a143
NALSGKHMGTYLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVF 370
380 390 400 410 420 430 m143.pep LIKETHGGVX |||||||||| a143
LIKETHGGVX 430
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 571>:
TABLE-US-00776 g144.seq 1 ATGAGCGATA CCCCCGCTAC CCGCGATTTC
GGCCTGATCG ACGGGCGGGC 51 CGTAACCGGC TATGTGCTGT CCAACCGGCG
TGGTACGTGC GTCTTCGTGC 101 TGGACTTGGG CGGGATTGTG CAGGAATTTT
CCGTTTTGGC AGACGGCGTG 151 CGCGAAAACC CCGTGGTGTC GTTCGACGAT
GCGGCTTCCT ATGCGGACAA 201 TCCGTTTCAG ATTAACAAGC AGATAGGGCG
CGTGGCCGGA CGCATCCGCG 251 GTGCGGCGTT CGACATCAAC GGTAGGACTT
ACCGCGTGGA GGCCAACGAA 301 GGCAGGAACG CGCTGCACGG CGGTTCGCAC
GGGCTGGCCG TTACCcgtTT 351 CAACGCGGTG GCGGCAGACG GccgacggTt
atCCCAACGA TTTGGatatT 401 TCctaccgCT TGGACGAGGA CGGCCGGCTT
ACCGTtaccT ATCGCGCCAC 451 CGCgctCGGC GACACGGTGT TCGACCCGAC
GCTGCACATT TACTGGCGGC 501 TGGACGCGGG CCTGCACGAT GCGGTTCTGC
ATATTCCGCA GGGCGGACAT 551 ATTCCGGCCG ATGCCGAAAA ACTGCCCGTC
TTAACGGTTT CAGACGGCCT 601 CGAAGTATTT GA
This corresponds to the amino acid sequence <SEQ ID 572; ORF
144.ng>:
TABLE-US-00777 g144.pep 1 MSDTPATRDF GLIDGRAVTG YVLSNRRGTC
VFVLDLGGIV QEFSVLADGV 51 RENPVVSFDD AASYADNPFQ INKQIGRVAG
RIRGAAFDIN GRTYRVEANE 101 GRNALHGGSH GLAVTRFNAV AADGRRLSQR
FGYFLPLGRG RPAYRYLSRH 151 RARRHGVRPD AAHLLAAGRG PARCGSAYSA
GRTYSGRCRK TARLNGFRRP 201 RSI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 573>:
TABLE-US-00778 m144.seq 1 ATGAGCGATA CCCCCGCTAC CCGCGATTTC
GGTCTGATCG ACGGGCGTGC 51 CGTAACCGGC TATGTGCTGT CCAACCGGCG
TGGTACGCGT GTCTGCGTGC 101 TGGACTTGGG CGGGATTGTG CAGGAATTTT
CCGTTTTGGC AGACGGCGTG 151 CGCGAAAACC TCGTGGTGTC GTTCGATGAT
GCGGCTTCCT ATGCGGACAA 201 TCCGTTTCAG ATTAACAAAC AGATAGGGCG
CGTGGCCGGA CGCATCCGCG 251 GTGCGGCGTT CGACATCAAC GGCAGGACTT
ACCGCGTGGA GGCCAACGAA 301 GGCAGGAACG CGCTGCACGG CGGTTCGCAC
GGGCTGGCCG TTACCCGTTT 351 CAACGCGGTG GCGGCAGACG GCCGTTCGGT
GGTGCTGCGC AGCCGCCTGg 401 CAACAGTCGG CCGACGGTTA TCCCAACGAT
TTGGATTTGG ATATTTCCTA 451 CCGCTTGGAC GAGGACGACC GGCTTACCGT
TAcCTATCGC GCCACCGCGC 501 TCGGCGACAC GGTGTTCGAC CCGACGCTGC
ACATTTACTG GCGGCTGGAC 551 GCGGGCCTGC ACGATGCGGT TCTGCATATT
CCGCAGGGCG GACATATGCC 601 GGCCGATGCC GAAAAACTGC CCGTCTCAAC
GGTTTCAGAC GACCTCGAAG 651 TATTTGA
This corresponds to the amino acid sequence <SEQ ID 574; ORF
144>:
TABLE-US-00779 m144.pep 1 MSDTPATRDF GLIDGRAVTG YVLSNRRGTR
VCVLDLGGIV QEFSVLADGV 51 RENLVVSFDD AASYADNPFQ INKQIGRVAG
RIRGAAFDIN GRTYRVEANE 101 GRNALHGGSH GLAVTRFNAV AADGRSVVLR
SRLATVGRRL SQRFGFGYFL 151 PLGRGRPAYR YLSRHRARRH GVRPDAAHLL
AAGRGPARCG SAYSAGRTYA 201 GRCRKTARLN GFRRPRSI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00780 m144/g144 91.3% identity in 218 aa overlap 10 20 30
40 50 60 m144.pep
MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFSVLADGVRENLVVSFDD
||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| g144
MSDTPATRDFGLIDGRAVTGYVLSNRRGTCVFVLDLGGIVQEFSVLADGVRENPVVSFDD 10 20
30 40 50 60 70 80 90 100 110 120 m144.pep
AASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGRNALHGGSHGLAVTRFNAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g144
AASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGRNALHGGSHGLAVTRFNAV 70 80
90 100 110 120 130 140 150 160 170 180 m144.pep
AADGRSVVLRSRLATVGRRLSQRFGFGYFLPLGRGRPAYRYLSRHRARRHGVRPDAAHLL |||
||||||||| ||||||||||||||||||||||||||||||||| g144
AAD-------------GRRLSQRFG--YFLPLGRGRPAYRYLSRHRARRHGVRPDAAHLL 130
140 150 160 190 200 210 219 m144.pep
AAGRGPARCGSAYSAGRTYAGRCRKTARLNGFRRPRSIX
|||||||||||||||||||:||||||||||||||||||| g144
AAGRGPARCGSAYSAGRTYSGRCRKTARLNGFRRPRSIX 170 180 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 575>:
TABLE-US-00781 a144.seq 1 ATGAGCGATA CCCCCGCTAC CCGCGATTTC
GGCCTGATCG ACGGGCGTGC 51 CGTAACCGGC TATGTGCTGT CCAACCGGCG
TGGTACGCGT GTCTGCGTGC 101 TGGACTTGGG CGGGATTGTG CAGGAATTTT
CCGTTTTGGC AGACGGCGTG 151 CGCGAAAACC TCGTGGTGTC GTTCGACGAT
GCGGCTTCCT ATGCGGACAA 201 TCCGTTTCAG ATTAACAAGC AGATAGGGCG
CGTGGCCGGA CGCATCCGCG 251 GTGCGGCGTT CGACATCAAC GGCAGGACTT
ACCGCGTGGA GGCCAACGAA 301 GGCAGGAACG CGCTGCACGG CGGTTCGCAC
GGGCTGGCCG TTACCCGTTT 351 CAACGCGGTG GCGGCAGACG GCCGTTCGGT
GGTGCTGCGC AGCCGCCTG. 401 CAACAGTCGG CCGACGGTTA TCCCAACGAT
TTGGATTTGG ATATTTCCTA 451 CCGCTTGGAC GAGGACGACC GGCTTACCGT
TACCTATCGC GCCACCGCGC 501 TCGGCGACAC GGTGTTCGAC CCGACGCTGC
ACATTTACTG GCGGCTGGAC 551 GCGGGCCTGC ACGATGCGGT TCTGCATATT
CCGCAGGGCG GACATATTCC 601 GGCCGATGCC GAAAAACTGC CCGTCTCAAC
GGTTTCAGAC GACCTCGAAG 651 TATTTGA
This corresponds to the amino acid sequence <SEQ ID 576; ORF
144.a>:
TABLE-US-00782 a144.pep 1 MSDTPATRDF GLIDGRAVTG YVLSNRRGTR
VCVLDLGGIV QEFSVLADGV 51 RENLVVSFDD AASYADNPFQ INKQIGRVAG
RIRGAAFDIN GRTYRVEANE 101 GRNALHGGSH GLAVTRFNAV AADGRSVVLR
SRLXTVGRRL SQRFGFGYFL 151 PLGRGRPAYR YLSRHRARRH GVRPDAAHLL
AAGRGPARCG SAYSAGRTYS 201 GRCRKTARLN GFRRPRSI* m144/a144 99.1%
identity in 218 aa overlap 10 20 30 40 50 60 m144.pep
MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFSVLADGVRENLVVSFDD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a144
MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFSVLADGVRENLVVSFDD 10 20
30 40 50 60 70 80 90 100 110 120 m144.pep
AASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGRNALHGGSHGLAVTRFNAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a144
AASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGRNALHGGSHGLAVTRFNAV 70 80
90 100 110 120 130 140 150 160 170 180 m144.pep
AADGRSVVLRSRLATVGRRLSQRFGFGYFLPLGRGRPAYRYLSRHRARRHGVRPDAAHLL
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| a144
AADGRSVVLRSRLXTVGRRLSQRFGFGYFLPLGRGRPAYRYLSRHRARRHGVRPDAAHLL 130
140 150 160 170 180 190 200 210 219 m144.pep
AAGRGPARCGSAYSAGRTYAGRCRKTARLNGFRRPRSIX
|||||||||||||||||||:||||||||||||||||||| a144
AAGRGPARCGSAYSAGRTYSGRCRKTARLNGFRRPRSIX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 577>:
TABLE-US-00783 g146.seq 1 ATGAAGCAAA TCCCCCTCCG CCTTCTCCAG
GTCGTCATTG ACCACGACAA 51 AGTCGAACAA TACGGACTGT TCGATTTCAT
GCCTTGCCTT CGACAGCCTC 101 CTTTGGATAa ctTCCCGACT GTCCGTCCCG
CGCcctTTGA GGCGCGCGGC 151 AAGCACGTCG AAAGAAGGCG GCAGGATAAA
GATACCGACA GCTTCCGGCA 201 GCGCGTTGCG AACCTGCGCC GCGCCCTGAA
CGTCGATTTC CAAAATCACG 251 TCATAGCCTG CCGCCGCCAA CGCATTCACG
CCCTCCGTGC TTGTGCCGTA 301 ATAGTTGCCG AATACGTCTG CGTATTCCAA
AAAAGCCTCC TGCGCGATAA 351 GCGATTCAAA CTCTTCTTTG GAAACAAAGT
GATAATGTAC GCCGTTTGCT 401 TCGCCTTCAC GCGGCGGGCG CGTCGTATGC
GACACGGAAA CGCGCAAACC 451 GTTATGGTTT GCCAACAGCC GCGACACCAG
CGTGGTTTTG CCCGTGCCGG 501 AAGCGGCCGA AATGATAAAG ATGTTGCCTT
TTCGATAAGC GGACATATTT 551 TTTACCTGTA TATTTTCCAA CCGATTGTAT
CACAACGGAC ACCCTATTTC 601 ATATTTGCCG ATGCCCATAT TTTGCCGCTA
TTGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 578; ORF
146.ng>:
TABLE-US-00784 g146.pep 1 MKQIPLRLLQ VVIDHDKVEQ YGLFDFMPCL
RQPPLDNFPT VRPAPFEARG 51 KHVERRRQDK DTDSFRQRVA NLRRALNVDF
QNHVIACRRQ RIHALRACAV 101 IVAEYVCVFQ KSLLRDKRFK LFFGNKVIMY
AVCFAFTRRA RRMRHGNAQT 151 VMVCQQPRHQ RGFARAGSGR NDKDVAFSIS
GHIFYLYIFQ PIVSQRTPYF 201 IFADAHILPL LF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 579>:
TABLE-US-00785 m146.seq 1 ATGGCGCAAA TCCTCCTCCG CTCGCGCCAA
GTCGTCATTG ACCACGACAA 51 AGTCAAACAA TACGGACTGC TCGATTTCAT
GCCTTGCCTT CGACAGCCTC 101 CTTTGGATAA CTTCCCGACT GTCCGTCCCG
CGTCCGTTGA GGCGCGCGGC 151 AAGTACGTCG AAAGAAGGCG GCAGGATAAA
GATGCCGACG GCTTCGGGCA 201 GCGCGTCGCG AACCTGCGCC GCGCCCTGAA
CGTCGATTTC CAAAATCACG 251 TCATAGCCTG CCGCCGCCAA CGCATTCACA
CCCTCCGCGC CTGTGCCGTA 301 ATAGTTGCCA AATACGTCGG CGTATTCCAA
AAAAGCTTCC TGCGCGATAA 351 GCGACTCAAA CTCTTCTTTG GAAACAAAGT
GATAATGTAC GCCGTTTGCT 401 TCGCCTTCAC GCGGCGGGCG CGTCGTGTGC
GACACGGAAA CGCGCAAACC 451 GTTATGGTTT GCCAACAGCC GCGACACCAG
CGTGGTTTTG CCCGTGCCGG 501 AAGCGGCCGA AATGATAAAG ATGTTGCCTT
TTCGATAAGC GGACATATTT 551 TTTACCTGTA TATTTTCCAG CCGATTGTAT
CACAATGGAC ACCCAGTTTC 601 CTATTTGCCG ATGCCCATAT TTTGCCGCTA
TTGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 580; ORF
146>:
TABLE-US-00786 m146.pep 1 MAQILLRSRQ VVIDHDKVKQ YGLLDFMPCL
RQPPLDNFPT VRPASVEARG 51 KYVERRRQDK DADGFGQRVA NLRRALNVDF
QNHVIACRRQ RIHTLRACAV 101 IVAKYVGVFQ KSFLRDKRLK LFFGNKVIMY
AVCFAFTRRA RRVRHGNAQT 151 VMVCQQPRHQ RGFARAGSGR NDKDVAFSIS
GHIFYLYIFQ PIVSQWTPSF 201 LFADAHILPL LF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00787 m146/g146 90.1% identity in 212 aa overlap 10 20 30
40 50 60 m146.pep
MAQILLRSRQVVIDHDKVKQYGLLDFMPCLRQPPLDNFPTVRPASVEARGKYVERRRQDK | ||
|| |||||||||:||||:|||||||||||||||||||| |||||:|||||||| g146
MKQIPLRLLQVVIDHDKVEQYGLFDFMPCLRQPPLDNFPTVRPAPFEARGKHVERRRQDK 10 20
30 40 50 60 70 80 90 100 110 120 m146.pep
DADGFGQRVANLRRALNVDFQNHVIACRRQRIHTLRACAVIVAKYVGVFQKSFLRDKRLK |:|:|
|||||||||||||||||||||||||||:|||||||||:|| |||||:|||||:| g146
DTDSFRQRVANLRRALNVDFQNHVIACRRQRIHALRACAVIVAEYVCVFQKSLLRDKRFK 70 80
90 100 110 120 130 140 150 160 170 180 m146.pep
LFFGNKVIMYAVCFAFTRRARRVRHGNAQTVMVCQQPRHQRGFARAGSGRNDKDVAFSIS
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| g146
LFFGNKVIMYAVCFAFTRRARRMRHGNAQTVMVCQQPRHQRGFARAGSGRNDKDVAFSIS 130
140 150 160 170 180 190 200 210 m146.pep
GHIFYLYIFQPIVSQWTPSFLFADAHILPLLFX ||||||||||||||| || |:||||||||||||
g146 GHIFYLYIFQPIVSQRTPYFIFADAHILPLLFX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 581>:
TABLE-US-00788 a146.seq 1 ATGGCGCAAA TCCTCCTCCG CCCGCGCCAA
GTCATCATTG ACCACGACAA 51 AATCGAACAA TACGGACTGT TCGATTTCAT
GCCTTGCCTT CGACAGCCTC 101 CTTTGGATAA CTTCCCGACT GTCCGTCCCG
CGTCCGTTGA GACGCGCAGC 151 AAGCACATCG AAAGACGGCG GCAGGATAAA
GATGCCGACG GCTTCGGGCA 201 GCGCATCTCG AACCTGAGCC GCGCCCTGAA
CGTCGATTTC CAAAATCACG 251 TCATAACCTG CCGCCGCCAA CGCATTCACA
CCCTCCGCGC TTGTGCCGTA 301 ATAGTTGCCG AACACGTCCG CGTATTCCAA
AAAAGCCTCC TGCGCGATAA 351 GCGACTCAAA CTCTTCTTTG GAAACAAAGT
GATAATGTAC GCCGTTTGCT 401 TCGCCTTCAC GCGGCGGACG CGTCGTGTGC
GACACGGAAA CGCGCAAACC 451 GTTATGGTTT GCCAACAGCC GCGACACCAG
CGTGGTTTTG CCCGTGCCGG 501 AAGCGGCCGA AATGATAAAG ATGTTGCCTT
TTCGATAAGC GGACATATTT 551 TTTACCTGTA TATTTTCCAG CCGATTGTAT
CACAACGGAC ACCCGGTTTC 601 CTATTTGCCG ATGCCCATAT TTTGCCGCTA
TTGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 582; ORF
146.a>:
TABLE-US-00789 a146.pep 1 MAQILLRPRQ VIIDHDKIEQ YGLFDFMPCL
RQPPLDNFPT VRPASVETRS 51 KHIERRRQDK DADGFGQRIS NLSRALNVDF
QNHVITCRRQ RIHTLRACAV 101 IVAEHVRVFQ KSLLRDKRLK LFFGNKVIMY
AVCFAFTRRT RRVRHGNAQT 151 VMVCQQPRHQ RGFARAGSGR NDKDVAFSIS
GHIFYLYIFQ PIVSQRTPGF 201 LFADAHILPL LF* m146/a146 90.6% identity
in 212 aa overlap 10 20 30 40 50 60 m146.pep
MAQILLRSRQVVIDHDKVKQYGLLDFMPCLRQPPLDNFPTVRPASVEARGKYVERRRQDK
||||||| |||:|||||::||||:|||||||||||||||||||||||:|:|::||||||| a146
MAQILLRPRQVIIDHDKIEQYGLFDFMPCLRQPPLDNFPTVRPASVETRSKHIERRRQDK 10 20
30 40 50 60 70 80 90 100 110 120 m146.pep
DADGFGQRVANLRRALNVDFQNHVIACRRQRIHTLRACAVIVAKYVGVFQKSFLRDKRLK
||||||||::|| ||||||||||||:|||||||||||||||||::| |||||:||||||| a146
DADGFGQRISNLSRALNVDFQNHVITCRRQRIHTLRACAVIVAEHVRVFQKSLLRDKRLK 70 80
90 100 110 120 130 140 150 160 170 180 m146.pep
LFFGNKVIMYAVCFAFTRRARRVRHGNAQTVMVCQQPRHQRGFARAGSGRNDKDVAFSIS
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| a146
LFFGNKVIMYAVCFAFTRRTRRVRHGNAQTVMVCQQPRHQRGFARAGSGRNDKDVAFSIS 130
140 150 160 170 180 190 200 210 m146.pep
GHIFYLYIFQPIVSQWTPSFLFADAHILPLLFX ||||||||||||||| ||:||||||||||||||
a146 GHIFYLYIFQPIVSQRTPGFLFADAHILPLLFX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 583>:
TABLE-US-00790 g147.seq (partial) 1 ..ATGCGACGAG AAGCCAAAAT
GGCACAAATC ACACTCAAAC CCATTGTTTT 51 ATCAATTCTT TTAATCAACA
CACCCCTCCT CGCCCAAGCG CATGAAACTG 101 AGCAATCGGT GGGCTTGGAA
ACGGTCAGCG TCGTCGGCAA AAGCCGTCCG 151 CGCGCGACTT CGGGGCTGCT
GCACACTTCG ACCGCCTCCG ACAAAATCAT 201 CTCCGGCGAT ACTTTGCGCC
AAAAAGCCGT CAACTTGGGC GACGCTTTGG 251 ACGGCGTACC GGGCATCCAC
GCTTCGCAAT ACGGCGGCGG CGCATCCGCT 301 CCCGTTATTC GCGGTCAAAC
GGGCAGACGG ATTAAAGTAT TGAACCATCA 351 CGGCGAAACG GGCGATATGG
CGGACTTTTC TCCCGATCAC GCCATTATGG 401 TAGATACCGC CTTGTCGCAA
CAGGTTGAAA TCCTGCGCGG GCCGGTTACG 451 CTCTTGTACA GCTCGGgcaa
tgtggccgGG GCTGGtcaat gttgccgatg 501 gAAAAAtccc ccaaaaAAtg cc..
This corresponds to the amino acid sequence <SEQ ID 584; ORF
147.ng>:
TABLE-US-00791 g147.pep (partial) 1 ..MRREAKMAQI TLKPIVLSIL
LINTPLLAQA HETEQSVGLE TVSVVGKSRP 51 RATSGLLHTS TASDKIISGD
TLRQKAVNLG DALDGVPGIH ASQYGGGASA 101 PVIRGQTGRR IKVLNHHGET
GDMADFSPDH AIMVDTALSQ QVEILRGPVT 151 LLYSSGNVAG AGQCCRWKNP
PKNA..
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 585>:
TABLE-US-00792 m147.seq (partial) 1 ..CCGCATAAAA CTGAGCAATC
GGTGGATTTG GAAACGGTCA GCGTCGTCGG 51 CAAAAGCCGT CCGCGCGCCA
CGTCGGGGCT GTTGCACACT TCGACCGCCT 101 CCGACAAAAT CATCTCCGGC
GATACCTTGC GCCAAAAAGC CGTCAACTTG 151 GGCGACGCTT TAGACGGCGT
ACCGGGCATC CACGCTTCGC AATACGGCGG 201 CGGCGCGTCT GCTCCCGTCA
TTCGCGGTCA AACAGGCAGG CGGATTAAAG 251 TGTTGAACCA TCACGGCGAA
ACAGGCGATA TGGCGGATTT TTCGCCCGAT 301 CACGCCATTA TGGTAGATAC
CGCCTTGTCG CAACAGGTCG AAATCCTGCG 351 CGGGCCGGTT ACGCTCTTGT
ACAGCTCGGG CAATGTGGCG GGGCTGGTCG 401 ATGTTGCCGA TGGCAAAATC
CCCGAAAAAA TGCCTGAAAA CGGCGTATCG 451 GGCGAACTCG GATTGCGTTT
GAGCAGCGGC AATCTGGAAA AACTCACGTC 501 CGGCGGCATC AATATCGGTT
TGGGCAAAAA CTTTGTATTG CACACGGAAG 551 GGCTGTACCG CAAATCGGGG
GATTACGCCG TACCGCGTTA CCGCAATCTG 601 AAACGCCTGC CCGACAGCCA
CGCCGATTCG CAAACGGGCA GCATCGGGCT 651 GTCTTGGGTT GGCGAAAAAG
GTTTTATCGG CGTAGCGTAC AGCGACCGTC 701 GCGACCAATA TGGTCTGCCT
GCCCACAGCC ACGAATACGA TGATTGCCAC 751 GCCGACATCA TCTGGCAAAA
GAGCTTGATT AACAAACGCT ATTTACAGCT 801 TTATCCGCAC CTGTTGACCG
AAGAAGACAT CGATTACGAC AATCCGGGCT 851 TGAGCTGCGG CTTCCACGAC
GACGATAATG CACACGCACA CACCCACAGC 901 GGCAGACCGT GGATAGACCT
GCGCAACAAA CGCTACGAAC TCCGTGCCGA 951 ATGGAAGCAA CCGTTCCCCG
GTTTTGAAGC CCTGCGCGTA CACCTGAACC 1001 GCAACGACTA CCGCCACGAC
GAAAAAGCAG GCGATGCAGT CGAAAACTTT 1051 TTTAACAACC AAACGCAAAA
CGGCGGCATC GAGTTGCGCC ACCAACCCAT 1101 AGGTCGTCTG AAAGGCAGCT
GGGGCGTGCA ATATTTACAA CAAAAATCCA 1151 GTGCTTTATC TGCCATATCC
GAAGCGGTTA AACAACCGAT GCTGCTTGAC 1201 AACAAAGTGC AACATTACAG
CTTTTTCGGT GTAGAACAGG CAAACTGGGA 1251 CAACTTCACG CTTGAAGGAG
GCGTACGCGT GGAAAAACAA AAAGCCTCCA 1301 TTCAGTACGA CAAAGCATTG
ATTGATCGGG AAAACTACTA CAACCACCCC 1351 CTGCCCGACC TCGGCGCGCA
CCGCCAAACC GCCCGCTCAT TCGCACTTTC 1401 GGGCAACTGG TATTTCACGC
CACAACACAA ACTCAGCCTG ACCGCCTCCC 1451 ATCAGGAACG CCTGCCGTCA
ACGCAAGAGC TGTACGCACA CGGCAAACAC 1501 GTCGCCACCA ACACCTTTGA
AGTCGGCAAC AAACACCTCA ACAAAGAGCG 1551 TTCCAACAAT ATCGAACTCG
CGCTGGGCTA CGAAGGCGAC CGCTGGCAAT 1601 ACAATCTGGC ACTCTACCGC
AACCGCTTCG GTAACTACAT TTACGCCCAA 1651 ACCTTAAACG ACGGACGCGG
CCCCAAATCC ATCGAAGACG ACAGCGAAAT 1701 GAAGCTCGTG CGCTACAACC
AATCCGGCGC CGACTTCTAC GGCGCGGAAG 1751 GCGAAATCTA CTTCAAACCG
ACACCGCGCT ACCGCATCGG CGTTTCCGGC 1801 GACTATGTAC GAGGCCGTCT
GAAAAACCTG CCTTCCCTAC CCGGCAGAGA 1851 AGATGCCTAC GGCAACCGTC
CTTTCATCGC ACAGGACGAC CAAAATGCCC 1901 CCCGTGTTCC GGCTGCGCGC
CTCGGCTTCC ACCTGAAAGC CTCGCTGACC 1951 GACCGTATCG ATGCCAATTT
GGACTACTAC CGCGTGTTCG CCCAAAACAA 2001 ACTCGCCCGC TACGAAACGC
GCACGCCCGG ACACCATATG CTCAACCTCG 2051 GCGCAAACTA CCGCCGCAAT
ACGCGCTATG GCGAGTGGAA TTGGTACGTC 2101 AAAGCCGACA ACCTGCTCAA
CCAATCCGTT TACGCCCACA GCAGCTTTCT 2151 CTCTGATACG CCGCAAATGG
GCCGCAGCTT TACCGGCGGC GTGAACGTGA 2201 AGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 586; ORF
147>:
TABLE-US-00793 m147.pep (partial) 1 ..PHKTEQSVDL ETVSVVGKSR
PRATSGLLHT STASDKIISG DTLRQKAVNL 51 GDALDGVPGI HASQYGGGAS
APVIRGQTGR RIKVLNHHGE TGDMADFSPD 101 HAIMVDTALS QQVEILRGPV
TLLYSSGNVA GLVDVADGKI PEKMPENGVS 151 GELGLRLSSG NLEKLTSGGI
NIGLGKNFVL HTEGLYRKSG DYAVPRYRNL 201 KRLPDSHADS QTGSIGLSWV
GEKGFIGVAY SDRRDQYGLP AHSHEYDDCH 251 ADIIWQKSLI NKRYLQLYPH
LLTEEDIDYD NPGLSCGFHD DDNAHAHTHS 301 GRPWIDLRNK RYELRAEWKQ
PFPGFEALRV HLNRNDYRHD EKAGDAVENF 351 FNNQTQNARI ELRHQPIGRL
KGSWGVQYLQ QKSSALSAIS EAVKQPMLLD 401 NKVQHYSFFG VEQANWDNFT
LEGGVRVEKQ KASIQYDKAL IDRENYYNHP 451 LPDLGAHRQT ARSFALSGNW
YFTPQHKLSL TASHQERLPS TQELYAHGKH 501 VATNTFEVGN KHLNKERSNN
IELALGYEGD RWQYNLALYR NRFGNYIYAQ 551 TLNDGRGPKS IEDDSEMKLV
RYNQSGADFY GAEGEIYFKP TPRYRIGVSG 601 DYVRGRLKNL PSLPGREDAY
GNRPFIAQDD QNAPRVPAAR LGFHLKASLT 651 DRIDANLDYY RVFAQNKLAR
YETRTPGHHM LNLGANYRRN TRYGEWNWYV 701 KADNLLNQSV YAHSSFLSDT
PQMGRSFTGG VNVKF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00794 m147/g147 92.3% identity in 142 aa overlap 10 20 30
m147.pep PHKTEQSVDLETVSVVGKSRPRATSGLLHTS |:|||||
|||||||||||||||||||||| g147
MRREAKMAQITLKPIVLSILLINTPLLAQAHETEQSVGLETVSVVGKSRPRATSGLLHTS 10 20
30 40 50 60 40 50 60 70 80 90 m147.pep
TASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGET
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g147
TASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGET 70 80
90 100 110 120 100 110 120 130 140 150 m147.pep
GDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSG
|||||||||||||||||||||||||||||||||||||||| : | | | g147
GDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGAGQCCRWKNPPKNA
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 587>:
TABLE-US-00795 a147.seq 1 ATGCGACGAG AAGCCAAAAT GGCACAAACT
ACACTCAAAC CCATTGTTTT 51 ATCAATTCTT TTAATCAACA CACCCCTCCT
CTCCCAAGCG CATGGAACTG 101 AGCAATCAGT GGGCTTGGAA ACGGTCAGCG
TCGTCGGCAA AAGCCGTCCG 151 CGCGCCACTT CGGGGCTGCT GCACACTTCT
ACCGCCTCCG ACAAAATCAT 201 CAGCGGCGAC ACCTTGCGAC AAAAAGCCGT
CAACTTGGGT GATGCTTTAG 251 ACGGCGTACC GGGCATTCAT GCCTCGCAAT
ACGGCGGCGG CGCATCCGCT 301 CCCGTTATTC GCGGTCAAAC AGGCAGACGG
ATTAAAGTGT TGAACCATCA 351 CGGCGAAACG GGCGACATGG CGGACTTCTC
TCCAGACCAT GCAATCATGG 401 TGGACAGCGC CTTGTCGCAA CAGGTCGAAA
TCCTGCGCGG TCCGGTTACG 451 CTCTTGTACA GCTCGGGCAA TGTGGCGGGG
CTGGTCGATG TTGCCGATGG 501 CAAAATCCCC GAAAAAATGC CTGAAAACGG
CGTATCGGGC GAACTCGGAT 551 TGCGTTTGAG CAGCGGCAAT CTGGAAAAAC
TCACGTCCGG CGGCATCAAT 601 ATCGGTTTGG GCAAAAACTT TGTATTGCAC
ACGGAAGGGC TGTACCGCAA 651 ATCGGGGGAT TACGCCGTAC CGCGTTACCG
CAATCTGAAA CGCCTGCCCG 701 ACAGCCACGC CGATTCGCAA ACGGGCAGCA
TCGGGCTGTC TTGGGTTGGC 751 GAAAAAGGCT TTATCGGCGC AGCATACAGC
GACCGTCGCG ACCAATATGG 801 TCTGCCTGCC CACAGCCACG AATACGATGA
TTGCCACGCC GACATCATCT 851 GGCAAAAGAG TTTGATTAAC AAACGCTATT
TGCAGCTTTA TCCGCACCTG 901 TTGACCGAAG AAGACATCGA TTACGACAAT
CCGGGCTTGA GCTGCGGCTT 951 TCACGACGAC GATGATGCAC ACGCCCATGC
CCACAACGGC AAACCTTGGA 1001 TAGACCTGCG CAACAAACGC TACGAACTCC
GCGCCGAATG GAAGCAACCG 1051 TTCCCCGGTT TTGAAGCCCT GCGCGTACAC
CTGAACCGCA ACGACTACCG 1101 CCACGACGAA AAAGCAGGCG ATGCAGTAGA
AAACTTTTTT AACAACCAAA 1151 CGCAAAACGC CCGTATCGAG TTGCGCCACC
AACCCATAGG CCGTCTGAAA 1201 GGCAGCTGGG GCGTGCAATA TTTGGGACAA
AAATCCAGTG CTTTATCTGC 1251 CACATCCGAA GCGGTCAAAC AACCGATGCT
GCTTGACAAT AAAGTGCAAC 1301 ATTACAGCTT TTTCGGTGTA GAACAGGCAA
ACTGGGACAA CTTCACGCTT 1351 GAAGGCGGCG TACGCGTGGA AAAACAAAAA
GCCTCCATCC GCTACGACAA 1401 AGCATTGATT GATCGGGAAA ACTACTACAA
CCATCCCCTG CCCGACCTCG 1451 GCGCGCACCG CCAAACCGCC CGCTCATTCG
CACTTTCGGG CAACTGGTAT 1501 TTCACGCCAC AACACAAACT CAGCCTGACC
GCCTCCCATC AGGAACGCCT 1551 GCCGTCAACG CAAGAGCTGT ACGCACACGG
CAAACACGTC GCCACCAACA 1601 CCTTTGAAGT CGGCAACAAA CACCTCAACA
AAGAGCGTTC CAACAATATC 1651 GAACTCGCGC TGGGCTACGA AGGCGACCGC
TGGCAATACA ATCTGGCACT 1701 CTACCGCAAC CGCTTCGGCA ACTACATTTA
CGCCCAAACC TTAAACGACG 1751 GACGCGGCCC CAAATCCATC GAAGACGACA
GCGAAATGAA GCTCGTGCGC 1801 TACAACCAAT CCGGTGCGGA CTTCTACGGC
GCGGAAGGCG AAATCTACTT 1851 CAAACCGACA CCGCGCTACC GCATCGGCGT
TTCCGGCGAC TATGTACGAG 1901 GCCGTCTGAA AAACCTGCCT TCCCTACCCG
GCAGGGAAGA CGCCTACGGC 1951 AACCGCCCAC TCATTGCCCA AGCCGACCAA
AACGCCCCTC GCGTTCCGGC 2001 TGCGCGCCTC GGCGTCCACC TGAAAGCCTC
GCTGACCGAC CGCATCGATG 2051 CCAATTTGGA CTACTACCGC GTGTTCGCCC
AAAACAAACT CGCCCGCTAC 2101 GAAACGCGCA CGCCCGGACA CCATATGCTC
AACCTCGGCG CAAACTACCG 2151 CCGCAATACG CGCTATGGCG AGTGGAATTG
GTACGTCAAA GCCGACAACC 2201 TGCTCAACCA ATCCGTTTAC GCCCACAGCA
GCTTCCTCTC TGATACGCCG 2251 CAAATGGGCC GCAGCTTTAC CGGCGGCGTG
AACGTGAAGT TTTAA
This corresponds to the amino acid sequence <SEQ ID 588; ORF
147.a>:
TABLE-US-00796 a147.pep 1 MRREAKMAQT TLKPIVLSIL LINTPLLSQA
HGTEQSVGLE TVSVVGKSRP 51 RATSGLLHTS TASDKIISGD TLRQKAVNLG
DALDGVPGIH ASQYGGGASA 101 PVIRGQTGRR IKVLNHHGET GDMADFSPDH
AIMVDSALSQ QVEILRGPVT 151 LLYSSGNVAG LVDVADGKIP EKMPENGVSG
ELGLRLSSGN LEKLTSGGIN 201 IGLGKNFVLH TEGLYRKSGD YAVPRYRNLK
RLPDSHADSQ TGSIGLSWVG 251 EKGFIGAAYS DRRDQYGLPA HSHEYDDCHA
DIIWQKSLIN KRYLQLYPHL 301 LTEEDIDYDN PGLSCGFHDD DDAHAHAHNG
KPWIDLRNKR YELRAEWKQP 351 FPGFEALRVH LNRNDYRHDE KAGDAVENFF
NNQTQNARIE LRHQPIGRLK 401 GSWGVQYLGQ KSSALSATSE AVKQPMLLDN
KVQHYSFFGV EQANWDNFTL 451 EGGVRVEKQK ASIRYDKALI DRENYYNHPL
PDLGAHRQTA RSFALSGNWY 501 FTPQHKLSLT ASHQERLPST QELYAHGKHV
ATNTFEVGNK HLNKERSNNI 551 ELALGYEGDR WQYNLALYRN RFGNYIYAQT
LNDGRGPKSI EDDSEMKLVR 601 YNQSGADFYG AEGEIYFKPT PRYRIGVSGD
YVRGRLKNLP SLPGREDAYG 651 NRPLIAQADQ NAPRVPAARL GVHLKASLTD
RIDANLDYYR VFAQNKLARY 701 ETRTPGHHML NLGANYRRNT RYGEWNWYVK
ADNLLNQSVY AHSSFLSDTP 751 QMGRSFTGGV NVKF* m147/a147 98.1% identity
in 734 aa overlap 10 20 30 m147.pep PHKTEQSVDLETVSVVGKSRPRATSGLLHTS
| ||||| |||||||||||||||||||||| a147
MRREAKMAQTTLKPIVLSILLINTPLLSQAHGTEQSVGLETVSVVGKSRPRATSGLLHTS 10 20
30 40 50 60 40 50 60 70 80 90 m147.pep
TASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGET
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a147
TASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGET 70 80
90 100 110 120 100 110 120 130 140 150 m147.pep
GDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSG
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a147
GDMADFSPDHAIMVDSALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSG 130
140 150 160 170 180 160 170 180 190 200 210 m147.pep
ELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a147
ELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQ 190
200 210 220 230 240 220 230 240 250 260 270 m147.pep
TGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHL
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| a147
TGSIGLSWVGEKGFIGAAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHL 250
260 270 280 290 300 280 290 300 310 320 330 m147.pep
LTEEDIDYDNPGLSCGFHDDDNAHAHTHSGRPWIDLRNKRYELRAEWKQPFPGFEALRVH
|||||||||||||||||||||:||||:|:|:||||||||||||||||||||||||||||| a147
LTEEDIDYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKRYELRAEWKQPFPGFEALRVH 310
320 330 340 350 360 340 350 360 370 380 390 m147.pep
LNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGRLKGSWGVQYLQQKSSALSAISE
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || a147
LNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGRLKGSWGVQYLGQKSSALSATSE 370
380 390 400 410 420 400 410 420 430 440 450 m147.pep
AVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPL
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| a147
AVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIRYDKALIDRENYYNHPL 430
440 450 460 470 480 460 470 480 490 500 510 m147.pep
PDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a147
PDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNK 490
500 510 520 530 540 520 530 540 550 560 570 m147.pep
HLNKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a147
HLNKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVR 550
560 570 580 590 600 580 590 600 610 620 630 m147.pep
YNQSGADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||:||| || a147
YNQSGADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPLIAQADQ 610
620 630 640 650 660 640 650 660 670 680 690 m147.pep
NAPRVPAARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNT
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a147
NAPRVPAARLGVHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNT 670
680 690 700 710 720 700 710 720 730 m147.pep
RYGEWNWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX
||||||||||||||||||||||||||||||||||||||||||||| a147
RYGEWNWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX 730 740 750 760
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 589>:
TABLE-US-00797 g148.seq 1 ATGGCGTTAA AAACATCAAA CTTGGAACAC
GCAATGctgg ttcaTCCCGA 51 AgctATgagt gtcggcgCGC TTGccgAcaa
AATCCGCAAA AtcgaAAact 101 gGCCGCAAAA AGgcaTCTTA TTCCACGACA
TCACGCCCGT CCTGCAAAGT 151 GCGGAATACT TCCGCCTTTT GGTCGATTTG
CTGGTTTACC GCTATATGGA 201 TCAGAAAATC GACATCGTTG CCGGCTTGGA
CGCGCGCGGC TTCATTATCG 251 GCGCGGCACT CGCCTACCAG CTCAaCGtcg
gctTCGTCCC CATCCGCAAA 301 AAAGGCAAGC TGCCTTTTGA AACCGTATCG
CAAAGCTAcg cgcTCGAATA 351 CGGGGAAGCT GCGGTGGAAA TCCACACCGa
tgccgTCAAA CCCGGTTCGC 401 GCGTCCTGCT GGTCGATGAT TTGGTTGCCA
CGGGCGGCAC AATGCTTGCC 451 GGGCTGGAAC TGATCCGCAA ACTCGGCGGG
GAAATTGTCG AAgccgccgC 501 CATTTTGGAA TTTACCGACC TTCAAGGCGG
CAAGAATATC CGCGCAAGTG 551 GCGCGCCCTT ATTTACCCTG CTTCAAAACG
AAGGCTGCAT GAAAGGCTGA
This corresponds to the amino acid sequence <SEQ ID 590; ORF
148.ng>:
TABLE-US-00798 g148.pep 1 MALKTSNLEH AMLVHPEAMS VGALADKIRK
IENWPQKGIL FHDITPVLQS 51 AEYFRLLVDL LVYRYMDQKI DIVAGLDARG
FIIGAALAYQ LNVGFVPIRK 101 KGKLPFETVS QSYALEYGEA AVEIHTDAVK
PGSRVLLVDD LVATGGTMLA 151 GLELIRKLGG EIVEAAAILE FTDLQGGKNI
RASGAPLFTL LQNEGCMKG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 591>:
TABLE-US-00799 m148.seq 1 ATGGCGTTAA AAACATCAAA CTTGGAACAC
GCAATGCTGG TTCATCCCGA 51 AGCTATGAGT GTCGGCGCGC TTGCCGACAA
AATCCGCAAA ATCGAAAACT 101 GGCCGCAAAA AGGCATCTTA TTCCACGACA
TCACGCCCGT CCTTCAAAGC 151 GCGGAATACT TCCGCCTTTT GGTTGATTTA
TTGGTTTACC GCTATATGGA 201 TCAGAAAATC GACATCGTTG CCGGTTTGGA
CGCGCGCGGC TTCATTATCG 251 GCGCGGCACT CGCCTACCAG CTCAACGTCG
GTTTCGTCCC CATCCGCAAA 301 AAAGGCAAGC TGCCTTTTGA AACCGTATCG
CAAAGCTACG CGCTCGAATA 351 CGGGGAAGCT GCGGTGGAAA TCCACACCGA
TGCCGTCAAA CTCGGTTCGC 401 GCGTGCTGCT GGTCGATGAT TTGATTGCCA
CGGGCGGCAC GATGCTTGCC 451 GGACTGGAAC TGATCCGCAA ACTCGGCGGA
GAAATTGTCG AAGCCGCCGC 501 CATTTTGGAA TTTACCGACC TTCAAGGCGG
CAAGAATATC CGTGCAAGCG 551 GCGCGCCCTT ATTTACCCTG CTTCAAAACG
AAGGCTGTAT GAAGGGCTGA
This corresponds to the amino acid sequence <SEQ ID 592; ORF
148>:
TABLE-US-00800 m148.pep 1 MALKTSNLEH AMLVHPEAMS VGALADKIRK
IENWPQKGIL FHDITPVLQS 51 AEYFRLLVDL LVYRYMDQKI DIVAGLDARG
FIIGAALAYQ LNVGFVPIRK 101 KGKLPFETVS QSYALEYGEA AVEIHTDAVK
LGSRVLLVDD LIATGGTMLA 151 GLELIRKLGG EIVEAAAILE FTDLQGGKNI
RASGAPLFTL LQNEGCMKG*
Computer analysis of this amino acid sequence gave the following
results:
TABLE-US-00801 m148/g148 99.0% identity in 199 aa overlap 10 20 30
40 50 60 m148.pep
MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g148
MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDL 10 20
30 40 50 60 70 80 90 100 110 120 m148.pep
LVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g148
LVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEA 70 80
90 100 110 120 130 140 150 160 170 180 m148.pep
AVEIHTDAVKLGSRVLLVDDLIATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI
|||||||||| ||||||||||:|||||||||||||||||||||||||||||||||||||| g148
AVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 130
140 150 160 170 180 190 200 m148.pep RASGAPLFTLLQNEGCMKGX
|||||||||||||||||||| g148 RASGAPLFTLLQNEGCMKGX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 593>:
TABLE-US-00802 a148.seq 1 ATGGCGTTAA AAACATCAAA CTTGGAACAC
GCAATGCTGG TTCATCCCGA 51 AGCTATGAGT GTCGGTGCGC TTGCCGACAA
AATCCGCAAA ATCGAAAACT 101 GGCCGCAAAA AGGCATCTTA TTCCACGACA
TCACGCCCGT CCTGCAAAGC 151 GCGGAATACT TCCGACTTTT GGTTGATTTA
TTGGTTTACC GCTATATGGA 201 TCAGAAAATC GACATCGTTG CCGGTTTGGA
CGCGCGCGGC TTCATTATCG 251 GCGCGGCACT CGCCTACCAG CTCAACGTCG
GTTTCGTCCC CATCCGCAAA 301 AAAGGCAAGC TGCCTTTTGA AACCGTATCG
CAAAGCTACG CGCTCGAATA 351 CGGGGAAGCT GCGGTGGAAA TCCACACCGA
TGCCGTCAAA CTCGGTTCGC 401 GCGTGCTGCT GGTCGATGAT TTGGTTGCCA
CGGGCGGCAC GATGCTTGCC 451 GGACTGGAGC TGATCCGCAA ACTCGGCGGG
GAAATTGTCG AAGCCGCCGC 501 CATTTTGGAA TTTACCGACC TTCAAGGCGG
CAAGAATATC CGTGCAAGCG 551 GCGCGCCCTT ATTTACCCTG CTTCAAAACG
AAGGCTGTAT GAAGGGCTGA
This corresponds to the amino acid sequence <SEQ ID 594; ORF
148.a>:
TABLE-US-00803 a148.pep 1 MALKTSNLEH AMLVHPEAMS VGALADKIRK
IENWPQKGIL FHDITPVLQS 51 AEYFRLLVDL LVYRYMDQKI DIVAGLDARG
FIIGAALAYQ LNVGFVPIRK 101 KGKLPFETVS QSYALEYGEA AVEIHTDAVK
LGSRVLLVDD LVATGGTMLA 151 GLELIRKLGG EIVEAAAILE FTDLQGGKNI
RASGAPLFTL LQNEGCMKG* m148/a148 99.5% identity in 199 aa overlap 10
20 30 40 50 60 m148.pep
MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a148
MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDL 10 20
30 40 50 60 70 80 90 100 110 120 m148.pep
LVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a148
LVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEA 70 80
90 100 110 120 130 140 150 160 170 180 m148.pep
AVEIHTDAVKLGSRVLLVDDLIATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| a148
AVEIHTDAVKLGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 130
140 150 160 170 180 190 200 m148.pep RASGAPLFTLLQNEGCMKGX
|||||||||||||||||||| a148 RASGAPLFTLLQNEGCMKGX 190 200
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 595>:
TABLE-US-00804 g149.seq 1 ATGTTGATTG ACAACAATGT CCGCCATTAC
AGCTTTTTCG GTGTAGAACA 51 GGCAAATTGG GACAACTTCA CGCTTGAAGG
CGGCGTACGC GTGGAAAAAC 101 AAAAAGCCTC CATCCGGTAC GACAAAGCAT
TGATTGATCG AGAAAACTAC 151 TACAACCAGC CCCTGCCCGA CCTCGGCGCG
CACCGCCAAA CCGCCCGCTC 201 GTTCGCACTT TCGGGCAACT GGTATTTCAC
GCCACACCAC AAACTCAGCC 251 TGACCGCCTC CCATCAGGAa cgCCTGCCGT
CAACGCaagA actGtACgca 301 cacggcAAGC ACGtcgccac CAACACCTTT
GAagtcggca acaaACACCT 351 CAACAAAGaG CgttccaacA atatcgaACT
CGCGCTGGgc tAcaaaggcg 401 accGCTGGCA ATACAATCTG GCAGCCTACC
GCAACCGAtT CGGCAACTAC 451 ATTTACGCCC AAACCTTAaa cgacggacgC
GGCCCCAAAT CCATCgaaga 501 cgacagcgaA ATGaagcTCG TGCGCTACAA
CCAATCCGGT GCCGACTTCT 551 ACGgcgcggA aggcgaaatc tACTTcaaaC
CGAcACCGCG CTACCGCATC 601 GGTGTTTCCG GCGACTatgt acgaggccgT
CTGAAAAACC TGCCGTCCCT 651 ACCCGGCAGG gaagatccCT AcggcAAACG
TCccttcaTC GCACAAGCCG 701 ACCAAAACGC CCCCCGCATT ccggctGCGC
GCCTCGGCTT CCACCTGAAA 751 ACCTCGCTAA CCGACCGTAT CGATGCCAAT
TTGGACTACT ACCGCGTGTT 801 CGCCCAAAAC AAACTCGCCC GCTACGAAAC
GCGTACGCCC GGACACCATA 851 TGCTCAACCT CGGTGCAAAC TACCGCCGCA
ATACGCGCTA TGGCGAGTGG 901 AATTGGTACG TCAAAGCCGA CAACCTGCtc
aACcaatCcg tTTACGCCCa 951 cAGCAGCTTC CTCTCTGATA CGCCGCAAAt
gGGCCGCAGC TTtgccgGCg 1001 gcgtaAACGT GaAGTTttaA
This corresponds to the amino acid sequence <SEQ ID 596; ORF
149.ng>:
TABLE-US-00805 g149.pep 1 MLIDNNVRHY SFFGVEQANW DNFTLEGGVR
VEKQKASIRY DKALIDRENY 51 YNQPLPDLGA HRQTARSFAL SGNWYFTPHH
KLSLTASHQE RLPSTQELYA 101 HGKHVATNTF EVGNKHLNKE RSNNIELALG
YKGDRWQYNL AAYRNRFGNY 151 IYAQTLNDGR GPKSIEDDSE MKLVRYNQSG
ADFYGAEGEI YFKPTPRYRI 201 GVSGDYVRGR LKNLPSLPGR EDPYGKRPFI
AQADQNAPRI PAARLGFHLK 251 TSLTDRIDAN LDYYRVFAQN KLARYETRTP
GHHMLNLGAN YRRNTRYGEW 301 NWYVKADNLL NQSVYAHSSF LSDTPQMGRS
FAGGVNVKF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 597>:
TABLE-US-00806 m149.seq 1 ATGCTGCTTG ACAACAAAGT GCAACATTAC
AGCTTTTTCG GTGTAGAACA 51 GGCAAACTGG GACAACTTCA CGCTTGAAGG
AGGCGTACGC GTGGAAAAAC 101 AAAAAGCCTC CATTCAGTAC GACAAAGCAT
TGATTGATCG GGAAAACTAC 151 TACAACCACC CCCTGCCCGA CCTCGGCGCG
CACCGCCAAA CCGCCCGCTC 201 ATTCGCACTT TCGGGCAACT GGTATTTCAC
GCCACAACAC AAACTCAGCC 251 TGACCGCCTC CCATCAGGAA CGCCTGCCGT
CAACGCAAGA GCTGTACGCA 301 CACGGCAAAC ACGTCGCCAC CAACACCTTT
GAAGTCGGCA ACAAACACCT 351 CAACAAAGAG CGTTCCAACA ATATCGAACT
CGCGCTGGGC TACGAAGGCG 401 ACCGCTGGCA ATACAATCTG GCACTCTACC
GCAACCGCTT CGGTAACTAC 451 ATTTACGCCC AAACCTTAAA CGACGGACGC
GGCCCCAAAT CCATCGAAGA 501 CGACAGCGAA ATGAAGCTCG TGCGCTACAA
CCAATCCGGC GCCGACTTCT 551 ACGGCGCGGA AGGCGAAATC TACTTCAAAC
CGACACCGCG CTACCGCATC 601 GGCGTTTCCG GCGACTATGT ACGAGGCCGT
CTGAAAAACC TGCCTTCCCT 651 ACCCGGCAGA GAAGATGCCT ACGGCAACCG
TCCTTTCATC GCACAGGACG 701 ACCAAAATGC CCCCCGTGTT CCGGCTGCGC
GCCTCGGCTT CCACCTGAAA 751 GCCTCGCTGA CCGACCGTAT CGATGCCAAT
TTGGACTACT ACCGCGTGTT 801 CGCCCAAAAC AAACTCGCCC GCTACGAAAC
GCGCACGCCC GGACACCATA 851 TGCTCAACCT CGGCGCAAAC TACCGCCGCA
ATACGCGCTA TGGCGAGTGG 901 AATTGGTACG TCAAAGCCGA CAACCTGCTC
AACCAATCCG TTTACGCCCA 951 CAGCAGCTTT CTCTCTGATA CGCCGCAAAT
GGGCCGCAGC TTTACCGGCG 1001 GCGTGAACGT GAAGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 598; ORF
149>:
TABLE-US-00807 m149.pep 1 MLLDNKVQHY SFFGVEQANW DNFTLEGGVR
VEKQKASIQY DKALIDRENY 51 YNHPLPDLGA HRQTARSFAL SGNWYFTPQH
KLSLTASHQE RLPSTQELYA 101 HGKHVATNTF EVGNKHLNKE RSNNIELALG
YEGDRWQYNL ALYRNRFGNY 151 IYAQTLNDGR GPKSIEDDSE MKLVRYNQSG
ADFYGAEGEI YFKPTPRYRI 201 GVSGDYVRGR LKNLPSLPGR EDAYGNRPFI
AQDDQNAPRV PAARLGFHLK 251 ASLTDRIDAN LDYYRVFAQN KLARYETRTP
GHHMLNLGAN YRRNTRYGEW 301 NWYVKADNLL NQSVYAHSSF LSDTPQMGRS
FTGGVNVKF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 149
shows 95.9% identity over a 339 aa overlap with a predicted ORF
(ORF 149.ng) from N. gonorrhoeae:
TABLE-US-00808 m149/g149 10 20 30 40 50 60 m149.pep
MLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPLPDLGA
||:||:|:||||||||||||||||||||||||||||||:|||||||||||||:||||||| g149
MLIDNNVRHYSFFGVEQANWDNFTLEGGVRVEKQKASIRYDKALIDRENYYNQPLPDLGA 10 20
30 40 50 60 70 80 90 100 110 120 m149.pep
HRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKE
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| g149
HRQTARSFALSGNWYFTPHHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKE 70 80
90 100 110 120 130 140 150 160 170 180 m149.pep
RSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSG
|||||||||||:||||||||| |||||||||||||||||||||||||||||||||||||| g149
RSNNIELALGYKGDRWQYNLAAYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSG 130
140 150 160 170 180 190 200 210 220 230 240 m149.pep
ADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRV
|||||||||||||||||||||||||||||||||||||||||| ||:|||||| ||||||: g149
ADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDPYGKRPFIAQADQNAPRI 190
200 210 220 230 240 250 260 270 280 290 300 m149.pep
PAARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEW
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g149
PAARLGFHLKTSLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEW 250
260 270 280 290 300 310 320 330 340 m149.pep
NWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX
|||||||||||||||||||||||||||||||:|||||||| g149
NWYVKADNLLNQSVYAHSSFLSDTPQMGRSFAGGVNVKFX 310 320 330 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 599>:
TABLE-US-00809 a149.seq 1 ATGCTGCTTG ACAATAAAGT GCAACATTAC
AGCTTTTTCG GTGTAGAACA 51 GGCAAACTGG GACAACTTCA CGCTTGAAGG
CGGCGTACGC GTGGAAAAAC 101 AAAAAGCCTC CATCCGCTAC GACAAAGCAT
TGATTGATCG GGAAAACTAC 151 TACAACCATC CCCTGCCCGA CCTCGGCGCG
CACCGCCAAA CCGCCCGCTC 201 ATTCGCACTT TCGGGCAACT GGTATTTCAC
GCCACAACAC AAACTCAGCC 251 TGACCGCCTC CCATCAGGAA CGCCTGCCGT
CAACGCAAGA GCTGTACGCA 301 CACGGCAAAC ACGTCGCCAC CAACACCTTT
GAAGTCGGCA ACAAACACCT 351 CAACAAAGAG CGTTCCAACA ATATCGAACT
CGCGCTGGGC TACGAAGGCG 401 ACCGCTGGCA ATACAATCTG GCACTCTACC
GCAACCGCTT CGGCAACTAC 451 ATTTACGCCC AAACCTTAAA CGACGGACGC
GGCCCCAAAT CCATCGAAGA 501 CGACAGCGAA ATGAAGCTCG TGCGCTACAA
CCAATCCGGT GCGGACTTCT 551 ACGGCGCGGA AGGCGAAATC TACTTCAAAC
CGACACCGCG CTACCGCATC 601 GGCGTTTCCG GCGACTATGT ACGAGGCCGT
CTGAAAAACC TGCCTTCCCT 651 ACCCGGCAGG GAAGACGCCT ACGGCAACCG
CCCACTCATT GCCCAAGCCG 701 ACCAAAACGC CCCTCGCGTT CCGGCTGCGC
GCCTCGGCGT CCACCTGAAA 751 GCCTCGCTGA CCGACCGCAT CGATGCCAAT
TTGGACTACT ACCGCGTGTT 801 CGCCCAAAAC AAACTCGCCC GCTACGAAAC
GCGCACGCCC GGACACCATA 851 TGCTCAACCT CGGCGCAAAC TACCGCCGCA
ATACGCGCTA TGGCGAGTGG 901 AATTGGTACG TCAAAGCCGA CAACCTGCTC
AACCAATCCG TTTACGCCCA 951 CAGCAGCTTC CTCTCTGATA CGCCGCAAAT
GGGCCGCAGC TTTACCGGCG 1001 GCGTGAACGT GAAGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 600; ORF
149.a>:
TABLE-US-00810 a149.pep 1 MLLDNKVQHY SFFGVEQANW DNFTLEGGVR
VEKQKASIRY DKALIDRENY 51 YNHPLPDLGA HRQTARSFAL SGNWYFTPQH
KLSLTASHQE RLPSTQELYA 101 HGKHVATNTF EVGNKHLNKE RSNNIELALG
YEGDRWQYNL ALYRNRFGNY 151 IYAQTLNDGR GPKSIEDDSE MKLVRYNQSG
ADFYGAEGEI YFKPTPRYRI 201 GVSGDYVRGR LKNLPSLPGR EDAYGNRPLI
AQADQNAPRV PAARLGVHLK 251 ASLTDRIDAN LDYYRVFAQN KLARYETRTP
GHHMLNLGAN YRRNTRYGEW 301 NWYVKADNLL NQSVYAHSSF LSDTPQMGRS
FTGGVNVKF* m149/a149 98.8% identity in 339 aa overlap 10 20 30 40
50 60 m149.pep
MLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPLPDLGA
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| a149
MLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIRYDKALIDRENYYNHPLPDLGA 10 20
30 40 50 60 70 80 90 100 110 120 m149.pep
HRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a149
HRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKE 70 80
90 100 110 120 130 140 150 160 170 180 m149.pep
RSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a149
RSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSG 130
140 150 160 170 180 190 200 210 220 230 240 m149.pep
ADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRV
||||||||||||||||||||||||||||||||||||||||||||||||:||| ||||||| a149
ADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPLIAQADQNAPRV 190
200 210 220 230 240 250 260 270 280 290 300 m149.pep
PAARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEW ||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||| a149
PAARLGVHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEW 250
260 270 280 290 300 310 320 330 340 m149.pep
NWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX
|||||||||||||||||||||||||||||||||||||||| a149
NWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX 310 320 330 340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 601>:
TABLE-US-00811 g149-1.seq 1 ATGGCACAAA TCACACTCAA ACCCATTGTT
TTATCAATTC TTTTAATCAA 51 CACACCCCTC CTCGCCCAAG CGCATGAAAC
TGAGCAATCG GTGGGCTTGG 101 AAACGGTCAG CGTCGTCGGC AAAAGCCGTC
CGCGCGCGAC TTCGGGGCTG 151 CTGCACACTT CGACCGCCTC CGACAAAATC
ATCTCCGGCG ATACTTTGCG 201 CCAAAAAGCC GTCAACTTGG GCGACGCTTT
GGACGGCGTA CCGGGCATCC 251 ACGCTTCGCA ATACGGCGGC GGCGCATCCG
CTCCCGTTAT TCGCGGTCAA 301 ACGGGCAGAC GGATTAAAGT ATTGAACCAT
CACGGCGAAA CGGGCGATAT 351 GGCGGACTTT TCTCCCGATC ACGCCATTAT
GGTAGATACC GCCTTGTCGC 401 AACAGGTTGA AATCCTGCGC GGGCCGGTTA
CGCTCTTGTA CAGCTCGGGC 451 AATGTGGCGG GGCTGGTCGA TGTTGCCGAT
GGAAAAATCC CCGAAAAAAT 501 GCCTGAAAAC GGCGTATCGG GCGaagccgG
ATTGCGTTTG AGCAGCGGCA 551 ATTTAGAAAA ACTGACATCC GCAGGCATCA
ATATCGGACT GGGCAAAAAC 601 TTCGTGCTGC ATACCGAAGG CTTGTACCGC
AAATCGGGCG ATTACGCCGT 651 ACCGCGTTAC CGCAATCTGA AACGCCTGCC
CGACAGCCAT GCCGATTCGC 701 AAACGGGCAG CATCGGGCTG TCTTGGGTGG
GCGAAAAAGG CTTTATCGGC 751 GCAGCATACA GCGACCGTCG CGACCGCTAC
GGCCTGCCTG CCCACAGCCA 801 CGAATACGAT GATTGCCACG CCGACATCAT
CTGGCAAAAG AGTTTGATCA 851 ACAAACGCTA TTTGCAGCTT TATCCGCACT
TGTTGACCGA AGAAGACATC 901 GATTACGACA ATCCGGGCTT GAGCTGCGGC
TTCCACGACG GCGACGGTGC 951 ACACGCACAC ACCCACAACG GCAAACCGTG
GATAGACCTG CGCAACAAAC 1001 GCTACGAACT CCGCGCCGAA TGGAAGCAGC
CATTCCCCGG TTTTGAAGCC 1051 CTGCGCGTAC ATCTGAACCG CAATGACTAC
CACCACGACG AAAAAGCAGG 1101 CGATGCAGTA GAAAACTTCT TCAACAACAA
AACACACAAC GCCCGTATCG 1151 AGTTGCGCCA CCAACCCATA GGCCGTCTGA
AAGGCAGCTG GGGCGTGCAA 1201 TATTTGGGAC AAAAATCCAG CGCGCTTTCC
GCCATTCCCG AAACCGTCCA 1251 ACAACCGATG TTGATTGACA ACAATGTCCG
CCATTACAGC TTTTTCGGTG 1301 TAGAACAGGC AAATTGGGAC AACTTCACGC
TTGAAGGCGG CGTACGCGTG 1351 GAAAAACAAA AAGCCTCCAT CCGGTACGAC
AAAGCATTGA TTGATCGAGA 1401 AAACTACTAC AACCAGCCCC TGCCCGACCT
CGGCGCGCAC CGCCAAACCG 1451 CCCGCTCGTT CGCACTTTCG GGCAACTGGT
ATTTCACGCC ACACCACAAA 1501 CTCAGCCTGA CCGCCTCCCA TCAGGAACGC
CTGCCGTCAA CGCAAGAACT 1551 GTACGCACAC GGCAAGCACG TCGCCACCAA
CACCTTTGAA GTCGGCAACA 1601 AACACCTCAA CAAAGAGCGT TCCAACAATA
TCGAACTCGC GCTGGGCTAC 1651 GAAGGCGACC GCTGGCAATA CAATCTGGCA
GCCTACCGCA ACCGATTCGG 1701 CAACTACATT TACGCCCAAA CCTTAAACGA
CGGACGCGGC CCCAAATCCA 1751 TCGAAGACGA CAGCGAAATG AAGCTCGTGC
GCTACAACCA ATCCGGTGCC 1801 GACTTCTACG GCGCGGAAGG CGAAATCTAC
TTCAAACCGA CACCGCGCTA 1851 CCGCATCGGT GTTTCCGGCG ACTATGTACG
AGGCCGTCTG AAAAACCTGC 1901 CGTCCCTACC CGGCAGGGAA GATCCCTACG
GCAAACGTCC CTTCATCGCA 1951 CAAGCCGACC AAAACGCCCC CCGCATTCCG
GCTGCGCGCC TCGGCTTCCA 2001 CCTGAAAACC TCGCTAACCG ACCGTATCGA
TGCCAATTTG GACTACTACC 2051 GCGTGTTCGC CCAAAACAAA CTCGCCCGCT
ACGAAACGCG TACGCCCGGA 2101 CACCATATGC TCAACCTCGG TGCAAACTAC
CGCCGCAATA CGCGCTATGG 2151 CGAGTGGAAT TGGTACGTCA AAGCCGACAA
CCTGCTCAAC CAATCCGTTT 2201 ACGCCCACAG CAGCTTCCTC TCTGATACGC
CGCAAATGGG CCGCAGCTTT 2251 ACCGGCGGCG TAAACGTGAA GTTTTAA
This corresponds to the amino acid sequence <SEQ ID 602; ORF
149-1.ng>:
TABLE-US-00812 g149-1.pep 1 MAQITLKPIV LSILLINTPL LAQAHETEQS
VGLETVSVVG KSRPRATSGL 51 LHTSTASDKI ISGDTLRQKA VNLGDALDGV
PGIHASQYGG GASAPVIRGQ 101 TGRRIKVLNH HGETGDMADF SPDHAIMVDT
ALSQQVEILR GPVTLLYSSG 151 NVAGLVDVAD GKIPEKMPEN GVSGEAGLRL
SSGNLEKLTS AGINIGLGKN 201 FVLHTEGLYR KSGDYAVPRY RNLKRLPDSH
ADSQTGSIGL SWVGEKGFIG 251 AAYSDRRDRY GLPAHSHEYD DCHADIIWQK
SLINKRYLQL YPHLLTEEDI 301 DYDNPGLSCG FHDGDGAHAH THNGKPWIDL
RNKRYELRAE WKQPFPGFEA 351 LRVHLNRNDY HHDEKAGDAV ENFFNNKTHN
ARIELRHQPI GRLKGSWGVQ 401 YLGQKSSALS AIPETVQQPM LIDNNVRHYS
FFGVEQANWD NFTLEGGVRV 451 EKQKASIRYD KALIDRENYY NQPLPDLGAH
RQTARSFALS GNWYFTPHHK 501 LSLTASHQER LPSTQELYAH GKHVATNTFE
VGNKHLNKER SNNIELALGY 551 EGDRWQYNLA AYRNRFGNYI YAQTLNDGRG
PKSIEDDSEM KLVRYNQSGA 601 DFYGAEGEIY FKPTPRYRIG VSGDYVRGRL
KNLPSLPGRE DPYGKRPFIA 651 QADQNAPRIP AARLGFHLKT SLTDRIDANL
DYYRVFAQNK LARYETRTPG 701 HHMLNLGANY RRNTRYGEWN WYVKADNLLN
QSVYAHSSFL SDTPQMGRSF 751 TGGVNVKF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 603>:
TABLE-US-00813 m149-1.seq 1 ATGGCACAAA CTACACTCAA ACCCATTGTT
TTATCAATTC TTTTAATCAA 51 CACACCCCTC CTCGCCCAAG CGCATGAAAC
TGAGCAATCG GTGGATTTGG 101 AAACGGTCAG CGTCGTCGGC AAAAGCCGTC
CGCGCGCCAC GTCGGGGCTG 151 TTGCACACTT CGACCGCCTC CGACAAAATC
ATCTCCGGCG ATACCTTGCG 201 CCAAAAAGCC GTCAACTTGG GCGACGCTTT
AGACGGCGTA CCGGGCATCC 251 ACGCTTCGCA ATACGGCGGC GGCGCGTCTG
CTCCCGTCAT TCGCGGTCAA 301 ACAGGCAGGC GGATTAAAGT GTTGAACCAT
CACGGCGAAA CAGGCGATAT 351 GGCGGATTTT TCGCCCGATC ACGCCATTAT
GGTAGATACC GCCTTGTCGC 401 AACAGGTCGA AATCCTGCGC GGGCCGGTTA
CGCTCTTGTA CAGCTCGGGC 451 AATGTGGCGG GGCTGGTCGA TGTTGCCGAT
GGCAAAATCC CCGAAAAAAT 501 GCCTGAAAAC GGCGTATCGG GCGAACTCGG
ATTGCGTTTG AGCAGCGGCA 551 ATCTGGAAAA ACTCACGTCC GGCGGCATCA
ATATCGGTTT GGGCAAAAAC 601 TTTGTATTGC ACACGGAAGG GCTGTACCGC
AAATCGGGGG ATTACGCCGT 651 ACCGCGTTAC CGCAATCTGA AACGCCTGCC
CGACAGCCAC GCCGATTCGC 701 AAACGGGCAG CATCGGGCTG TCTTGGGTTG
GCGAAAAAGG TTTTATCGGC 751 GTAGCGTACA GCGACCGTCG CGACCAATAT
GGTCTGCCTG CCCACAGCCA 801 CGAATACGAT GATTGCCACG CCGACATCAT
CTGGCAAAAG AGCTTGATTA 851 ACAAACGCTA TTTACAGCTT TATCCGCACC
TGTTGACCGA AGAAGACATC 901 GATTACGACA ATCCGGGCTT GAGCTGCGGC
TTCCACGACG ACGATAATGC 951 ACACGCACAC ACCCACAGCG GCAGACCGTG
GATAGACCTG CGCAACAAAC 1001 GCTACGAACT CCGTGCCGAA TGGAAGCAAC
CGTTCCCCGG TTTTGAAGCC 1051 CTGCGCGTAC ACCTGAACCG CAACGACTAC
CGCCACGACG AAAAAGCAGG 1101 CGATGCAGTC GAAAACTTTT TTAACAACCA
AACGCAAAAC GCCCGCATCG 1151 AGTTGCGCCA CCAACCCATA GGTCGTCTGA
AAGGCAGCTG GGGCGTGCAA 1201 TATTTACAAC AAAAATCCAG TGCTTTATCT
GCCATATCCG AAGCGGTTAA 1251 ACAACCGATG CTGCTTGACA ACAAAGTGCA
ACATTACAGC TTTTTCGGTG 1301 TAGAACAGGC AAACTGGGAC AACTTCACGC
TTGAAGGAGG CGTACGCGTG 1351 GAAAAACAAA AAGCCTCCAT TCAGTACGAC
AAAGCATTGA TTGATCGGGA 1401 AAACTACTAC AACCACCCCC TGCCCGACCT
CGGCGCGCAC CGCCAAACCG 1451 CCCGCTCATT CGCACTTTCG GGCAACTGGT
ATTTCACGCC ACAACACAAA 1501 CTCAGCCTGA CCGCCTCCCA TCAGGAACGC
CTGCCGTCAA CGCAAGAGCT 1551 GTACGCACAC GGCAAACACG TCGCCACCAA
CACCTTTGAA GTCGGCAACA 1601 AACACCTCAA CAAAGAGCGT TCCAACAATA
TCGAACTCGC GCTGGGCTAC 1651 GAAGGCGACC GCTGGCAATA CAATCTGGCA
CTCTACCGCA ACCGCTTCGG 1701 TAACTACATT TACGCCCAAA CCTTAAACGA
CGGACGCGGC CCCAAATCCA 1751 TCGAAGACGA CAGCGAAATG AAGCTCGTGC
GCTACAACCA ATCCGGCGCC 1801 GACTTCTACG GCGCGGAAGG CGAAATCTAC
TTCAAACCGA CACCGCGCTA 1851 CCGCATCGGC GTTTCCGGCG ACTATGTACG
AGGCCGTCTG AAAAACCTGC 1901 CTTCCCTACC CGGCAGAGAA GATGCCTACG
GCAACCGTCC TTTCATCGCA 1951 CAGGACGACC AAAATGCCCC CCGTGTTCCG
GCTGCGCGCC TCGGCTTCCA 2001 CCTGAAAGCC TCGCTGACCG ACCGTATCGA
TGCCAATTTG GACTACTACC 2051 GCGTGTTCGC CCAAAACAAA CTCGCCCGCT
ACGAAACGCG CACGCCCGGA 2101 CACCATATGC TCAACCTCGG CGCAAACTAC
CGCCGCAATA CGCGCTATGG 2151 CGAGTGGAAT TGGTACGTCA AAGCCGACAA
CCTGCTCAAC CAATCCGTTT 2201 ACGCCCACAG CAGCTTTCTC TCTGATACGC
CGCAAATGGG CCGCAGCTTT 2251 ACCGGCGGCG TGAACGTGAA GTTTTAA
This corresponds to the amino acid sequence <SEQ ID 604; ORF
149-1>:
TABLE-US-00814 m149-1.pep 1 MAQTTLKPIV LSILLINTPL LAQAHETEQS
VDLETVSVVG KSRPRATSGL 51 LHTSTASDKI ISGDTLRQKA VNLGDALDGV
PGIHASQYGG GASAPVIRGQ 101 TGRRIKVLNH HGETGDMADF SPDHAIMVDT
ALSQQVEILR GPVTLLYSSG 151 NVAGLVDVAD GKIPEKMPEN GVSGELGLRL
SSGNLEKLTS GGINIGLGKN 201 FVLHTEGLYR KSGDYAVPRY RNLKRLPDSH
ADSQTGSIGL SWVGEKGFIG 251 VAYSDRRDQY GLPAHSHEYD DCHADIIWQK
SLINKRYLQL YPHLLTEEDI 301 DYDNPGLSCG FHDDDNAHAH THSGRPWIDL
RNKRYELRAE WKQPFPGFEA 351 LRVHLNRNDY RHDEKAGDAV ENFFNNQTQN
ARIELRHQPI GRLKGSWGVQ 401 YLQQKSSALS AISEAVKQPM LLDNKVQHYS
FFGVEQANWD NFTLEGGVRV 451 EKQKASIQYD KALIDRENYY NHPLPDLGAH
RQTARSFALS GNWYFTPQHK 501 LSLTASHQER LPSTQELYAH GKHVATNTFE
VGNKHLNKER SNNIELALGY 551 EGDRWQYNLA LYRNRFGNYI YAQTLNDGRG
PKSIEDDSEM KLVRYNQSGA 601 DFYGAEGEIY FKPTPRYRIG VSGDYVRGRL
KNLPSLPGRE DAYGNRPFIA 651 QDDQNAPRVP AARLGFHLKA SLTDRIDANL
DYYRVFAQNK LARYETRTPG 701 HHMLNLGANY RRNTRYGEWN WYVKADNLLN
QSVYAHSSFL SDTPQMGRSF 751 TGGVNVKF* m149-1/g149-1 96.2% identity in
758 aa overlap 10 20 30 40 50 60 m149-1.pep
MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRPRATSGLLHTSTASDKI |||
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| g149-1
MAQITLKPIVLSILLINTPLLAQAHETEQSVGLETVSVVGKSRPRATSGLLHTSTASDKI 10 20
30 40 50 60 70 80 90 100 110 120 m149-1.pep
ISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g149-1
ISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF 70 80
90 100 110 120 130 140 150 160 170 180 m149-1.pep
SPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRL
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| g149-1
SPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGEAGLRL 130
140 150 160 170 180 190 200 210 220 230 240 m149-1.pep
SSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGL
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g149-1
SSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGL 190
200 210 220 230 240 250 260 270 280 290 300 m149-1.pep
SWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDI
||||||||||:|||||||:||||||||||||||||||||||||||||||||||||||||| g149-1
SWVGEKGFIGAAYSDRRDRYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDI 250
260 270 280 290 300 310 320 330 340 350 360 m149-1.pep
DYDNPGLSCGFHDDDNAHAHTHSGRPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDY
||||||||||||| |:||||||:|:||||||||||||||||||||||||||||||||||| g149-1
DYDNPGLSCGFHDGDGAHAHTHNGKPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDY 310
320 330 340 350 360 370 380 390 400 410 420 m149-1.pep
RHDEKAGDAVENFFNNQTQNARIELRHQPIGRLKGSWGVQYLQQKSSALSAISEAVKQPM
:|||||||||||||||:|:||||||||||||||||||||||| ||||||||| |:|:||| g149-1
HHDEKAGDAVENFFNNKTHNARIELRHQPIGRLKGSWGVQYLGQKSSALSAIPETVQQPM 370
380 390 400 410 420 430 440 450 460 470 480 m149-1.pep
LLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPLPDLGAH
|:||:|:||||||||||||||||||||||||||||||:|||||||||||||:|||||||| g149-1
LIDNNVRHYSFFGVEQANWDNFTLEGGVRVEKQKASIRYDKALIDRENYYNQPLPDLGAH 430
440 450 460 470 480 490 500 510 520 530 540 m149-1.pep
RQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKER
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| g149-1
RQTARSFALSGNWYFTPHHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKER 490
500 510 520 530 540 550 560 570 580 590 600 m149-1.pep
SNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGA
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| g149-1
SNNIELALGYEGDRWQYNLAAYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGA 550
560 570 580 590 600 610 620 630 640 650 660 m149-1.pep
DFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVP
||||||||||||||||||||||||||||||||||||||||| ||:|||||| ||||||:| g149-1
DFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDPYGKRPFIAQADQNAPRIP 610
620 630 640 650 660 670 680 690 700 710 720 m149-1.pep
AARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWN
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| g149-1
AARLGFHLKTSLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWN 670
680 690 700 710 720 730 740 750 759 m149-1.pep
WYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX
||||||||||||||||||||||||||||||||||||||| g149-1
WYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX 730 740 750
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 605>:
TABLE-US-00815 a149-1.seq 1 ATGGCACAAA CTACACTCAA ACCCATTGTT
TTATCAATTC TTTTAATCAA 51 CACACCCCTC CTCTCCCAAG CGCATGGAAC
TGAGCAATCA GTGGGCTTGG 101 AAACGGTCAG CGTCGTCGGC AAAAGCCGTC
CGCGCGCCAC TTCGGGGCTG 151 CTGCACACTT CTACCGCCTC CGACAAAATC
ATCAGCGGCG ACACCTTGCG 201 ACAAAAAGCC GTCAACTTGG GTGATGCTTT
AGACGGCGTA CCGGGCATTC 251 ATGCCTCGCA ATACGGCGGC GGCGCATCCG
CTCCCGTTAT TCGCGGTCAA 301 ACAGGCAGAC GGATTAAAGT GTTGAACCAT
CACGGCGAAA CGGGCGACAT 351 GGCGGACTTC TCTCCAGACC ATGCAATCAT
GGTGGACAGC GCCTTGTCGC 401 AACAGGTCGA AATCCTGCGC GGTCCGGTTA
CGCTCTTGTA CAGCTCGGGC 451 AATGTGGCGG GGCTGGTCGA TGTTGCCGAT
GGCAAAATCC CCGAAAAAAT 501 GCCTGAAAAC GGCGTATCGG GCGAACTCGG
ATTGCGTTTG AGCAGCGGCA 551 ATCTGGAAAA ACTCACGTCC GGCGGCATCA
ATATCGGTTT GGGCAAAAAC 601 TTTGTATTGC ACACGGAAGG GCTGTACCGC
AAATCGGGGG ATTACGCCGT 651 ACCGCGTTAC CGCAATCTGA AACGCCTGCC
CGACAGCCAC GCCGATTCGC 701 AAACGGGCAG CATCGGGCTG TCTTGGGTTG
GCGAAAAAGG CTTTATCGGC 751 GCAGCATACA GCGACCGTCG CGACCAATAT
GGTCTGCCTG CCCACAGCCA 801 CGAATACGAT GATTGCCACG CCGACATCAT
CTGGCAAAAG AGTTTGATTA 851 ACAAACGCTA TTTGCAGCTT TATCCGCACC
TGTTGACCGA AGAAGACATC 901 GATTACGACA ATCCGGGCTT GAGCTGCGGC
TTTCACGACG ACGATGATGC 951 ACACGCCCAT GCCCACAACG GCAAACCTTG
GATAGACCTG CGCAACAAAC 1001 GCTACGAACT CCGCGCCGAA TGGAAGCAAC
CGTTCCCCGG TTTTGAAGCC 1051 CTGCGCGTAC ACCTGAACCG CAACGACTAC
CGCCACGACG AAAAAGCAGG 1101 CGATGCAGTA GAAAACTTTT TTAACAACCA
AACGCAAAAC GCCCGTATCG 1151 AGTTGCGCCA CCAACCCATA GGCCGTCTGA
AAGGCAGCTG GGGCGTGCAA 1201 TATTTGGGAC AAAAATCCAG TGCTTTATCT
GCCACATCCG AAGCGGTCAA 1251 ACAACCGATG CTGCTTGACA ATAAAGTGCA
ACATTACAGC TTTTTCGGTG 1301 TAGAACAGGC AAACTGGGAC AACTTCACGC
TTGAAGGCGG CGTACGCGTG 1351 GAAAAACAAA AAGCCTCCAT CCGCTACGAC
AAAGCATTGA TTGATCGGGA 1401 AAACTACTAC AACCATCCCC TGCCCGACCT
CGGCGCGCAC CGCCAAACCG 1451 CCCGCTCATT CGCACTTTCG GGCAACTGGT
ATTTCACGCC ACAACACAAA 1501 CTCAGCCTGA CCGCCTCCCA TCAGGAACGC
CTGCCGTCAA CGCAAGAGCT 1551 GTACGCACAC GGCAAACACG TCGCCACCAA
CACCTTTGAA GTCGGCAACA 1601 AACACCTCAA CAAAGAGCGT TCCAACAATA
TCGAACTCGC GCTGGGCTAC 1651 GAAGGCGACC GCTGGCAATA CAATCTGGCA
CTCTACCGCA ACCGCTTCGG 1701 CAACTACATT TACGCCCAAA CCTTAAACGA
CGGACGCGGC CCCAAATCCA 1751 TCGAAGACGA CAGCGAAATG AAGCTCGTGC
GCTACAACCA ATCCGGTGCG 1801 GACTTCTACG GCGCGGAAGG CGAAATCTAC
TTCAAACCGA CACCGCGCTA 1851 CCGCATCGGC GTTTCCGGCG ACTATGTACG
AGGCCGTCTG AAAAACCTGC 1901 CTTCCCTACC CGGCAGGGAA GACGCCTACG
GCAACCGCCC ACTCATTGCC 1951 CAAGCCGACC AAAACGCCCC TCGCGTTCCG
GCTGCGCGCC TCGGCGTCCA 2001 CCTGAAAGCC TCGCTGACCG ACCGCATCGA
TGCCAATTTG GACTACTACC 2051 GCGTGTTCGC CCAAAACAAA CTCGCCCGCT
ACGAAACGCG CACGCCCGGA 2101 CACCATATGC TCAACCTCGG CGCAAACTAC
CGCCGCAATA CGCGCTATGG 2151 CGAGTGGAAT TGGTACGTCA AAGCCGACAA
CCTGCTCAAC CAATCCGTTT 2201 ACGCCCACAG CAGCTTCCTC TCTGATACGC
CGCAAATGGG CCGCAGCTTT 2251 ACCGGCGGCG TGAACGTGAA GTTTTAA
This corresponds to the amino acid sequence <SEQ ID 606; ORF
149-1.a>:
TABLE-US-00816 a149-1.pep 1 MAQTTLKPIV LSILLINTPL LSQAHGTEQS
VGLETVSVVG KSRPRATSGL 51 LHTSTASDKI ISGDTLRQKA VNLGDALDGV
PGIHASQYGG GASAPVIRGQ 101 TGRRIKVLNH HGETGDMADF SPDHAIMVDS
ALSQQVEILR GPVTLLYSSG 151 NVAGLVDVAD GKIPEKMPEN GVSGELGLRL
SSGNLEKLTS GGINIGLGKN 201 FVLHTEGLYR KSGDYAVPRY RNLKRLPDSH
ADSQTGSIGL SWVGEKGFIG 251 AAYSDRRDQY GLPAHSHEYD DCHADIIWQK
SLINKRYLQL YPHLLTEEDI 301 DYDNPGLSCG FHDDDDAHAH AHNGKPWIDL
RNKRYELRAE WKQPFPGFEA 351 LRVHLNRNDY RHDEKAGDAV ENFFNNQTQN
ARIELRHQPI GRLKGSWGVQ 401 YLGQKSSALS ATSEAVKQPM LLDNKVQHYS
FFGVEQANWD NFTLEGGVRV 451 EKQKASIRYD KALIDRENYY NHPLPDLGAH
RQTARSFALS GNWYFTPQHK 501 LSLTASHQER LPSTQELYAH GKHVATNTFE
VGNKHLNKER SNNIELALGY 551 EGDRWQYNLA LYRNRFGNYI YAQTLNDGRG
PKSIEDDSEM KLVRYNQSGA 601 DFYGAEGEIY FKPTPRYRIG VSGDYVRGRL
KNLPSLPGRE DAYGNRPLIA 651 QADQNAPRVP AARLGVHLKA SLTDRIDANL
DYYRVFAQNK LARYETRTPG 701 HHMLNLGANY RRNTRYGEWN WYVKADNLLN
QSVYAHSSFL SDTPQMGRSF 751 TGGVNVKF* a149-1/m149-1 98.0% identity in
758 aa overlap 10 20 30 40 50 60 a149-1.pep
MAQTTLKPIVLSILLINTPLLSQAHGTEQSVGLETVSVVGKSRPRATSGLLHTSTASDKI
|||||||||||||||||||||:||| ||||| |||||||||||||||||||||||||||| m149-1
MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRPRATSGLLHTSTASDKI 10 20
30 40 50 60 70 80 90 100 110 120 a149-1.pep
ISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
ISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF 70 80
90 100 110 120 130 140 150 160 170 180 a149-1.pep
SPDHAIMVDSALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRL
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
SPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRL 130
140 150 160 170 180 190 200 210 220 230 240 a149-1.pep
SSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
SSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGL 190
200 210 220 230 240 250 260 270 280 290 300 a149-1.pep
SWVGEKGFIGAAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDI
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
SWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDI 250
260 270 280 290 300 310 320 330 340 350 360 a149-1.pep
DYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDY
|||||||||||||||:||||:|:|:||||||||||||||||||||||||||||||||||| m149-1
DYDNPGLSCGFHDDDNAHAHTHSGRPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDY 310
320 330 340 350 360 370 380 390 400 410 420 a149-1.pep
RHDEKAGDAVENFFNNQTQNARIELRHQPIGRLKGSWGVQYLGQKSSALSATSEAVKQPM
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| m149-1
RHDEKAGDAVENFFNNQTQNARIELRHQPIGRLKGSWGVQYLQQKSSALSAISEAVKQPM 370
380 390 400 410 420 430 440 450 460 470 480 a149-1.pep
LLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIRYDKALIDRENYYNHPLPDLGAH
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| m149-1
LLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPLPDLGAH 430
440 450 460 470 480 490 500 510 520 530 540 a149-1.pep
RQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
RQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHLNKER 490
500 510 520 530 540 550 560 570 580 590 600 a149-1.pep
SNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
SNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGA 550
560 570 580 590 600 610 620 630 640 650 660 a149-1.pep
DFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPLIAQADQNAPRVP
|||||||||||||||||||||||||||||||||||||||||||||||:||| |||||||| m149-1
DFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVP 610
620 630 640 650 660 670 680 690 700 710 720 a149-1.pep
AARLGVHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWN |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m149-1
AARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWN 670
680 690 700 710 720 730 740 750 759 a149-1.pep
WYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX
||||||||||||||||||||||||||||||||||||||| m149-1
WYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKFX 730 740 750
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 607>:
TABLE-US-00817 g150.seq (partial) 1 ..TACTGCAAGG CAGACCCCTT
TCCCGCCGCC CTGCTGGCCA ATCAGAAAAT 51 CACCGCCCGC CAATCCGATA
AAGACGTGCG CCACATCGAA ATCGATTTGA 101 GCGGTTCGGA TTTGCACTAC
CTCCCGGGCG ACGCGCTCGG CGTTTGGTTT 151 GACAACGATC CGGCACTGGT
CGGGGAAATC CTAGACCTGC TCGGCATCAA 201 TCCGGCAACG GAAATACAGG
CGGGCGGAAA AACCCTGCCG GTTGCCTCCG 251 CACTGTTATC CCATTTCGAA
CTCACGCAAA ACACCCCCGC CTTTGTCAAA 301 GGCTATGCCA CGTTCGCCGA
TAATGACGAA CTCGACCGTA TTGCTGCCGA 351 CAACGCCGTT TTGCAAGGCT
TTGTGCAAAG CACGCCGATT GCCGGTGTGC 401 TGCACCGCTT CCCGGCAAAA
CTGACGGCGG AACAATTCGC CGGCCTGCTG 451 CGCCCGCTTG CGCCGCGCCT
GTATTCGATT TCCTCGTCGC AGGCGGAAGC 501 GGGGGACGAA GTGCACCTGA
CCGTCGGCGC AGTGCGTTTC GAACACGAAG 551 GGCGCGCCAG GGCGGGCGGC
GCATCGGGTT TCTTTGCCGA CCGGCTGGAA 601 GAGGACGGCA CGGTGCGCGT
GTTTGCGGAA CGCAACGACG GCTTCAGGCT 651 GCCCGAAGAC AGCCGCAAGC
CGATTGTGAT GATCGGCTCC GGTACCGGCG 701 TCGCACCGTT CCGCGCCTTC
GTCCAACAAC GTGCCGCAGA AAATGCGGAA 751 GGCAGAAACT GGCTGATTTT
CGGCAATCCG CATTTTGCCG CCGACTTCCT 801 CTATCAGACC GAATGGCAGC
AGTTTGCCAA AGACGGCTTC CTGCACAGAT 851 ATGACTTCGC CTGGTCGCGC
GATCAGGAAG AAAAAATCTA TGTGCAGGAC 901 AAAATCCGCG AACAGGCGGA
AGGACTTTGG CAATGGCTGC AGGAAGGCGC 951 GCATATCTAT GTGTGCGGCG
ATGCGGCAAA AATGGCAAAA GAAGTGGAAG 1001 CCGCCTTGCT GGATGTGATT
ATCGGGGCAG GGCATTCGGA CGAAGACGGC 1051 GCAGAAGGAT ATTTGGATAT
GCTGCGCGAA GAAAAACGCT ATCAGCGTGA 1101 TGTTTATTGA
This corresponds to the amino acid sequence <SEQ ID 608; ORF
150.ng>:
TABLE-US-00818 g150.pep (partial) 1 ..YCKADPFPAA LLANQKITAR
QSDKDVRHIE IDLSGSDLHY LPGDALGVWF 51 DNDPALVGEI LDLLGINPAT
EIQAGGKTLP VASALLSHFE LTQNTPAFVK 101 GYATFADNDE LDRIAADNAV
LQGFVQSTPI AGVLHRFPAK LTAEQFAGLL 151 RPLAPRLYSI SSSQAEAGDE
VHLTVGAVRF EHEGRARAGG ASGFFADRLE 201 EDGTVRVFAE RNDGFRLPED
SRKPIVMIGS GTGVAPFRAF VQQRAAENAE 251 GRNWLIFGNP HFAADFLYQT
EWQQFAKDGF LHRYDFAWSR DQEEKIYVQD 301 KIREQAEGLW QWLQEGAHIY
VCGDAAKMAK EVEAALLDVI IGAGHSDEDG 351 AEGYLDMLRE EKRYQRDVY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 609>:
TABLE-US-00819 m150.seq 1 ATGCAGAACA CAAATCCGCC ATTACCGCCT
CTGCCGCCCG AAATCACGCA 51 GCTCCTGTCG GGGCTGGACG CGGCACAATG
GGCGTGGCTG TCCGGCTACG 101 CTTGGGCAAA AGCAGGAAAC GGGGCATCTG
CAGGACTGCC CGCGCTTCAG 151 ACGGCATTGC CGGCGGCAGA ACCTTTTTCC
GTAACCGTCC TTTCCGCCTC 201 GCAAACCGGC AATGCGAAAT CCGTTGCCGA
CAAAGCGGCG GACAGCCTGG 251 AAGCCGCCGG CATCCAAGTC AGTCGCGCCG
AACTGAAAGA CTATAAGGCG 301 AAAAACATCG CCGGCGAACG CCGCCTGCTG
CTGGTTACCT CCACCCAAGG 351 CGAAGGCGAA CCGCCGAAAG AAGCCGTCGT
GCTGCACAAA CTGCTGAACG 401 GCAAAAAAGC CCCGAAATTG GACAAACTCC
AATTTGCCGT ACTGGGTTTG 451 GGCGACAGTT CCTATCCGAA TTTCTGTCAG
GCAGGTAAAG ATTTCGACCG 501 GCGTTTTGAA GAATTGGGCG CAAAACGGCT
GCTCGAACGC GTTGATGCGG 551 ATTTGGACTT TACCGCCTCC GCAAACGCCT
GGACAGATAA TATCGCCGCA 601 CTCTTAAAAG AAGAAGCCGC AAAAAACCGG
GCAACGCCCG CGCCGCAGAC 651 AACGCCCCCC GCCGGCCTTC AGACGGCACC
GGATGGCAGG TACTGCAAGG 701 CAGCCCCCTT TCCCGCCGCC CTGCTGGCCA
ATCAGAAAAT CACCGCCCGC 751 CAATCCGATA AAGACGTGCG CCACATCGAA
ATCGATTTGA GCGGTTCGGA 801 TTTGCACTAC CTCCCGGGCG ACGCGCTCGG
CGTTTGGTTT GACAACGATC 851 CGGCACTGGT CAGGGAAATC CTAGACCTGC
TCGGCATCGA TCCGGCAACG 901 GAAATACAGG CGGGCGGAAA GATGATGCCG
GTTGCGCGCG CACTTTCATC 951 TCATTTCGAA CTCACGCAAA ACACTCCGGC
TTTCGTCAAA GGCTATGCCG 1001 CGTTCGCCCA TTATGAAGAA CTCGATAAAA
TCATTGCCGA TAACGCCGTT 1051 TTGCAGGATT TCGTGCAAAA CACGCCTATT
GTCGATGTGC TGCACCGCTT 1101 CCCGGCAAGC CTGACGGCAG AACAATTCAT
CCGTTTACTG CGTCCGCTTG 1151 CACCCCGTTT GTATTCGATT TCTTCAGCAC
AGGCGGAAGT GGGCGATGAA 1201 GTGCATTTAA CTGTCGGCGT GGTTCGTTTT
GAACACGAAG GCCGCGCCAG 1251 AACGGGCGGC GCATCGGGTT TCCTTGCCGA
CCGGCTGGAA GAGGACGGCA 1301 CGGTGCGCGT GTTTGTGGAA CGCAACGACG
GCTTCAGGCT GCCCGAAGAC 1351 AGCCGCAAGC CGATTGTGAT GATCGGCTCG
GGCACCGGCG TCGCACCGTT 1401 CCGCGCTTTC GTCCAACAAC GTGCCGCAGA
AAATGCGGAA GGCAAAAACT 1451 GGCTGATTTT CGGCAATCCG CATTTTGCCC
GTGATTTTCT CTATCAAACC 1501 GAATGGCAGC AGTTTGCCAA AGACGGCTTC
CTGCACAGGT ACGATTTCGC 1551 CTGGTCCCGC GATCAGGAAG AAAAAATCTA
TGTGCAGGAC AAAATCCGCG 1601 AACAGGCGGA AGGACTTTGG CAATGGCTGC
AGGAAGGCGC GCATATCTAT 1651 GTGTGCGGCG ATGCGGCAAA AATGGCAAAA
GACGTGGAAG CCGCCTTGCT 1701 GGATGTGATT ATCGGGGCAG GACATTTGGA
CGAAGAGGGC GCAGAAGAAT 1751 ATTTGGATAT GCTGCGCGAA GAAAAACGCT
ATCAGCGTGA TGTTTATTGA
This corresponds to the amino acid sequence <SEQ ID 610; ORF
150>:
TABLE-US-00820 m150.pep 1 MQNTNPPLPP LPPEITQLLS GLDAAQWAWL
SGYAWAKAGN GASAGLPALQ 51 TALPAAEPFS VTVLSASQTG NAKSVADKAA
DSLEAAGIQV SRAELKDYKA 101 KNIAGERRLL LVTSTQGEGE PPKEAVVLHK
LLNGKKAPKL DKLQFAVLGL 151 GDSSYPNFCQ AGKDFDRRFE ELGAKRLLER
VDADLDFTAS ANAWTDNIAA 201 LLKEEAAKNR ATPAPQTTPP AGLQTAPDGR
YCKAAPFPAA LLANQKITAR 251 QSDKDVRHIE IDLSGSDLHY LPGDALGVWF
DNDPALVREI LDLLGIDPAT 301 EIQAGGKMMP VARALSSHFE LTQNTPAFVK
GYAAFAHYEE LDKIIADNAV 351 LQDFVQNTPI VDVLHRFPAS LTAEQFIRLL
RPLAPRLYSI SSAQAEVGDE 401 VHLTVGVVRF EHEGRARTGG ASGFLADRLE
EDGTVRVFVE RNDGFRLPED 451 SRKPIVMIGS GTGVAPFRAF VQQRAAENAE
GKNWLIFGNP HFARDFLYQT 501 EWQQFAKDGF LHRYDFAWSR DQEEKIYVQD
KIREQAEGLW QWLQEGAHIY 551 VCGDAAKMAK DVEAALLDVI IGAGHLDEEG
AEEYLDMLRE EKRYQRDVY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 150
shows 91.3% identity over a 369 aa overlap with a predicted ORF
(ORF 150.ng) from N. gonorrhoeae:
TABLE-US-00821 m150/g150 210 220 230 240 250 260 m150.pep
LLKEEAAKNRATPAPQTTPPAGLQTAPDGRYCKAAPFPAALLANQKITARQSDKDVRHIE ||||
||||||||||||||||||||||||| g150 YCKADPFPAALLANQKITARQSDKDVRHIE 10 20
30 270 280 290 300 310 320 m150.pep
IDLSGSDLHYLPGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKMMPVARALSSHFE
||||||||||||||||||||||||||| ||||||||:|||||||||| :||| || |||| g150
IDLSGSDLHYLPGDALGVWFDNDPALVGEILDLLGINPATEIQAGGKTLPVASALLSHFE 40 50
60 70 80 90 330 340 350 360 370 380 m150.pep
LTQNTPAFVKGYAAFAHYEELDKIIADNAVLQDFVQNTPIVDVLHRFPASLTAEQFIRLL
|||||||||||||:|| :|||:| ||||||| |||:|||: |||||||:|||||| || g150
LTQNTPAFVKGYATFADNDELDRIAADNAVLQGFVQSTPIAGVLHRFPAKLTAEQFAGLL 100
110 120 130 140 150 390 400 410 420 430 440 m150.pep
RPLAPRLYSISSAQAEVGDEVHLTVGVVRFEHEGRARTGGASGFLADRLEEDGTVRVFVE
||||||||||||:|||:|||||||||:||||||||||:||||||:|||||||||||||:| g150
RPLAPRLYSISSSQAEAGDEVHLTVGAVRFEHEGRARAGGASGFFADRLEEDGTVRVFAE 160
170 180 190 200 210 450 460 470 480 490 500 m150.pep
RNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQT
|||||||||||||||||||||||||||||||||||||||||:||||||||||| |||||| g150
RNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGRNWLIFGNPHFAADFLYQT 220
230 240 250 260 270 510 520 530 540 550 560 m150.pep
EWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g150
EWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAK 280
290 300 310 320 330 570 580 590 600 m150.pep
DVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVYX :|||||||||||||| ||:|||
||||||||||||||||| g150 EVEAALLDVIIGAGHSDEDGAEGYLDMLREEKRYQRDVYX 340
350 360 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 611>:
TABLE-US-00822 a150.seq 1 ATGCAGAACA CAAATCCGCC ATTACCGCCT
ATGCCGCCCG AAATCACGCA 51 GCTCCTGTCG GGGCTGGACG CGGCACAATG
GGCGTGGCTG TCCGGCTACG 101 CTTGGGCAAA AGCAGGAAAC GGGGCATCTG
CAGGACTGCC CGCGCTTCAG 151 ACGGCATTGC CGACGGCAGA ACCTTTTTCC
GTAACCGTCC TTTCCGCCTC 201 GCAAACCGGC AATGCGAAAT CCGTTGCCGA
CAAAGCGGCG GACAGCCTGG 251 AAGCCGCCGG CATCCAAGTC AGTCGCGCCG
AACTGAAAGA CTATAAGGCG 301 AAAAACATCG CCGGCGAACG CCGCCTGCTG
CTGGTTACCT CCACCCAAGG 351 CGAAGGCGAA CCGCCGGAAG AAGCCGTCGT
GCTGCACAAA CTGCTGAACG 401 GCAAAAAAGC CCCGAAATTG GACAAACTCC
AATTTGCCGT ACTGGGTTTG 451 GGCGACAGCT CCTATCCGAA TTTCTGCCGG
GCGGGCAAAG ATTTCGACAA 501 ACGTTTTGAA GAATTGGGCG CAAAACGCCT
GCTCGAACGC GTTGATGCGG 551 ATTTGGACTT TGCCGCCGCC GCAGACGGAT
GGACAGATAA TATCGCCGCA 601 CTCTTAAAAG AAGAAGCCGC AAAAAACCGG
GCAACGCCCG CGCCGCAGAC 651 AACGCCCCCC GCCGGCCTTC AGACGGCACC
GGATGGCAGG TACTGCAAGG 701 CAGACCCCTT TGCCGCCGCC CTGCTGGCCA
ATCAGAAAAT CACCGCCCGC 751 CAATCCGATA AAGACGTGCG CCACATCGAA
ATCGATTTGA GCGGTTCGGA 801 TTTGCACTAC CTCCCGGGCG ACGCGCTCGG
CGTTTGGTTT GACAACGATC 851 CGGCACTGGT CAGGGAAATC CTAGACCTGC
TCGGCATCGA TCAGGCAACG 901 GAAATACAGG CGGGCGGAAA AACCCTGCCG
GTTGCCTCCG CACTGTTATC 951 CCATTTTGAA CTCACGCAAA ACACCCCCGC
CTTTGTCAAA GGCTATGCCC 1001 CGTTCGCCGA TGATGACGAA CTCGACCGTA
TTGCTGCCGA CAACGCCGTT 1051 TTGCAAGGCT TTGTGCAAAG CACGCCGATT
GCCGATGTGC TGCACCGCTT 1101 CCCGGCAAAA CTGACAGCGG AACAATTCGC
CGGCCTACTG CGCCCGCTTG 1151 CGCCGCGCCT GTATTCGATT TCCTCGTCGC
AGGCGGAAGT GGGGGACGAA 1201 GTGCACCTGA CCGTCGGCGC GGTGCGTTTC
GAACACGAAG GGCGCGCCAG 1251 GGCGGGCGGC GCATCGGGTT TCCTTGCCGA
CCGGCTGGAA GAGGACGGCA 1301 CGGTGCGCGT GTTTGTGGAA CGCAACGACG
GCTTCAGGCT GCCCGAAGAC 1351 AGCCGCAAGC CGATTGTGAT GATCGGCTCG
GGCACCGGCG TCGCACCGTT 1401 CCGCGCTTTC GTCCAACAAC GTGCCGCAGA
AAATGCGGAA GGCAAAAACT 1451 GGCTGTTTTT CGGCAATCCG CATTTTGCCC
GTGATTTTCT CTATCAAACC 1501 GAATGGCAGC AGTTTGCCAA AGACGGCTTC
CTGCACAGAT ACGATTTCGC 1551 CTGGTCGCGC GATCAGGAAG AAAAAATCTA
TGTGCAGGAC AAAATCCGCG 1601 AACAGGCGGA AGGACTTTGG CAATGGCTGC
AGGAAGGCGC GCATATCTAT 1651 GTGTGCGGCG ATGCGGCAAA AATGGCAAAA
GACGTGGAAG CCGCCTTGCT 1701 GGATGTGATT ATCGGGGCAG GACATTTGGA
CGAAGAGGGC GCAGAAGAAT 1751 ATTTGGATAT GCTGCGCGAA GAAAAACGCT
ATCAGCGTGA TGTTTATTGA
This corresponds to the amino acid sequence <SEQ ID 612; ORF
150.a>:
TABLE-US-00823 a150.pep 1 MQNTNPPLPP MPPEITQLLS GLDAAQWAWL
SGYAWAKAGN GASAGLPALQ 51 TALPTAEPFS VTVLSASQTG NAKSVADKAA
DSLEAAGIQV SRAELKDYKA 101 KNIAGERRLL LVTSTQGEGE PPEEAVVLHK
LLNGKKAPKL DKLQFAVLGL 151 GDSSYPNFCR AGKDFDKRFE ELGAKRLLER
VDADLDFAAA ADGWTDNIAA 201 LLKEEAAKNR ATPAPQTTPP AGLQTAPDGR
YCKADPFPAA LLANQKITAR 251 QSDKDVRHIE IDLSGSDLHY LPGDALGVWF
DNDPALVREI LDLLGIDQAT 301 EIQAGGKTLP VASALLSHFE LTQNTPAFVK
GYAPFADDDE LDRIAADNAV 351 LQGFVQSTPI ADVLHRFPAK LTAEQFAGLL
RPLAPRLYSI SSSQAEVGDE 401 VHLTVGAVRF EHEGRARAGG ASGFLADRLE
EDGTVRVFVE RNDGFRLPED 451 SRKPIVMIGS GTGVAPFRAF VQQRAAENAE
GKNWLFFGNP HFARDFLYQT 501 EWQQFAKDGF LHRYDFAWSR DQEEKIYVQD
KIREQAEGLW QWLQEGAHIY 551 VCGDAAKMAK DVEAALLDVI IGAGHLDEEG
AEEYLDMLRE EKRYQRDVY* m150/a150 94.8% identity in 599 aa overlap 10
20 30 40 50 60 m150.pep
MQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAGNGASAGLPALQTALPAAEPFS
||||||||||:|||||||||||||||||||||||||||||||||||||||||||:||||| a150
MQNTNPPLPPMPPEITQLLSGLDAAQWAWLSGYAWAKAGNGASAGLPALQTALPTAEPFS 10 20
30 40 50 60 70 80 90 100 110 120 m150.pep
VTVLSASQLGNAKSVADKAADSLEAAGIQVSRAELKDYKAKNIAGERRLLLVTSTQGEGE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a150
VTVLSASQLGNAKSVADKAADSLEAAGIQVSRAELKDYKAKNIAGERRLLLVTSTQGEGE 70 80
90 100 110 120 130 140 150 160 170 180 m150.pep
PPKEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSYPNFCQAGKDFDRRFEELGAKRLLER
||:||||||||||||||||||||||||||||||||||||:||||||:||||||||||||| a150
PPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSYPNFCRAGKDFDKRFEELGAKRLLER 130
140 150 160 170 180 190 200 210 220 230 240 m150.pep
VDADLDFLASANAWLDNIAALLKEEAAKNRATPAPQTTPPAGLQTAPDGRYCKAAPFPAA
|||||||:|:|::||||||||||||||||||||||||||||||||||||||||| ||||| a150
VDADLDFAAAADGWLDNIAALLKEEAAKNRATPAPQTTPPAGLQTAPDGRYCKADPFPAA 190
200 210 220 230 240 250 260 270 280 290 300 m150.pep
LLANQKITARQSDKDVRHIEIDLSGSDLHYLPGDALGVWFDNDPALVREILDLLGIDPAT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || a150
LLANQKITARQSDKDVRHIEIDLSGSDLHYLPGDALGVWFDNDPALVREILDLLGIDQAT 250
260 270 280 290 300 310 320 330 340 350 360 m150.pep
EIQAGGKMMPVARALSSHFELTQNTPAFVKGYAAFAHYEELDKIIADNAVLQDFVQNTPI
||||||| :||| || ||||||||||||||||| || :|||:| ||||||| |||:||| a150
EIQAGGKTLPVASALLSHFELTQNTPAFVKGYAPFADDDELDRIAADNAVLQGFVQSTPI 310
320 330 340 350 360 370 380 390 400 410 420 m150.pep
VDVLHRFPASLTAEQFIRLLRPLAPRLYSISSAQAEVGDEVHLTVGVVRFEHEGRARTGG
:||||||||:|||||| ||||||||||||||:|||||||||||||:||||||||||:|| a150
ADVLHRFPAKLTAEQFAGLLRPLAPRLYSISSSQAEVGDEVHLTVGAVRFEHEGRARAGG 370
380 390 400 410 420 430 440 450 460 470 480 m150.pep
ASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a150
ASGFLADRLEEDGTVRVFVERNDGFRLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAE 430
440 450 460 470 480 490 500 510 520 530 540 m150.pep
GKNWLIFGNPHFARDFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLW
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| a150
GKNWLFFGNPHFARDFLYQTEWQQFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLW 490
500 510 520 530 540 550 560 570 580 590 600 m150.pep
QWLQEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVYX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a150
QWLQEGAHIYVCGDAAKMAKDVEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVYX 550
560 570 580 590 600
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 613>:
TABLE-US-00824 g151.seq 1 ATGAAACAAA TCCGCAACAT CGCCATCATC
GCACACGTCG ACCACGGCAA 51 AACCACATTG GTCGACCAAC TGCTGCGCCA
ATCCGGCACA TTCCGCGCCA 101 ACCAGCAGGT TGACGAGCGC GTGATGGACA
GCAACGACCT TGAAAAAGAA 151 CGCGGCATCA CCATCCTCGC CAAAAACACC
GCCATCGATT ACGAAGGCTG 201 CCACATCAAT ATCGTCGACA CGCCGGGACA
CGCCGACTTC GGCGGCGAAG 251 TGGAGCGCGT TTTGGGGATG GTGGATTGCG
TCGTCTTGTT GGTGGACGCA 301 CAGGAAGGTC CGATGCCGCA AACCCGTTTC
GTGACCAAAA AAGCCTTGGC 351 TTTGGGGCTG AAACCGATTG TCGTCATCAA
CAAAATCGAC AAACCGTCCG 401 CCCGTCCGAG CTGGGTTATC GACCAGACTT
TCGAGTTGTT CGACAACTTG 451 GGTGCGACCG ACGAGCAGTT GGATTTCCCG
ATTGTTTACG CTTCAGGTTT 501 GAGCGGCTTT GCCAAGCTGG AAGAAAccga
CGAGAGCAGC GATATGCGCC 551 CGCtgttcgA CACCATCCTA AAATACAcgc
ctgCACCGAG CGGCAGCGCG 601 GACGAGCCGC TGCAACTGCA AATTTCCCAA
CTCGACTACG ACAACTACAC 651 CGGCCGCCTC GGTATCGGTC GTATCTTGAA
CGGACGCATC AAACCCGGCC 701 AAACCGTTGC CGTGATGAAC CACGAGCAGC
AAATCGCCCA AGGCCGCATC 751 AACCAGCTTT TGGGTTTCAA AGGCTTGGAA
CGCGTGCCGC TTGAAGAAGC 801 CGAAGCCGGC GACATTGTGA TTATTTCCGG
TATCGAAGAC ATCGGCATCG 851 GCGTAACCAT CACCGACAAA GACAACCCCA
AAGGCCTGCC GATGTTGAGC 901 GTGGACGAAC CGACGCTGAC GATGGACTTT
ATGGTAAACA CCAGCCCGCT 951 CGCAGGTACA GAAGGCAAAT TCGTGACCAG
CCGCCAAATC CGCGACCGCC 1001 TGCAAAAAGA ATTGCTGACC AACGTTGCCC
TGCGCGTGGA AGACACCGCC 1051 GatgCCGACG TGTTCCGCGT ATCcgGGCGC
GGCGAACTGC ACCTGACGAT 1101 TTTGCTGGAA AATATGCGCC GCGAAGGCTA
CGAACTCGCC GTCGGCAAGC 1151 CGCGCGTCGT GTACCGAGAC ATCGACGGTC
AAAAATGCGA ACCTTATGAA 1201 AACCTGACTG TGGACGTACc cgacgacAAC
CAAGGCGCGG TAATGGAAGA 1251 ACTCGGCCGC CGCCGTGGCG AACTGACCAA
TATGGAAAGC GACGGCAACG 1301 GacgCACCCG CCTCGAATAC CATATTCCAG
CGCGCGGCTT GATCGGTTTC 1351 CAAGGCGAAT TCATGACCCT GACGCGCGGC
GTCGGGCTGA TGAgccacGT 1401 GTTcgacgac tacgcgcccg tcaAACCCGA
TATGCCCGGC CGCCACAACG 1451 GCGTactggt GtcccaAGAG CAGGGCGAGG
CGGTTGCTTA CGCCTTGTGG 1501 AATCTTGAAG ACCGCGGCCG TATGTTCGTA
TCGCCCAACG ACAAAATCTA 1551 CGAAGGTATG ATTATCGGCA TCCACAGCCG
CGACAACGAT TTGGTGGTCA 1601 ACCCGCTCAA AGGCAAAAAA CTCACCAATA
TCCGTGCCAG CGGTACCGAC 1651 GAAGCGGTGC GCCTGACCAC GCCGATCAAA
CTGAcgcTGG AAGGCGCGGT 1701 CGAGTTTATC GACGATGACG AGCTGGTGGA
AATCACGCCG CAAtccatcc 1751 gcctgcgcat gcgttacctG AGCGaattgg
aacgccgccg tcaTTTTAAA 1801 AagctgGATT AA
This corresponds to the amino acid sequence <SEQ ID 614; ORF
151.ng>:
TABLE-US-00825 g151.pep 1 MKQIRNIAII AHVDHGKTTL VDQLLRQSGT
FRANQQVDER VMDSNDLEKE 51 RGITILAKNT AIDYEGCHIN IVDTPGHADF
GGEVERVLGM VDCVVLLVDA 101 QEGPMPQTRF VTKKALALGL KPIVVINKID
KPSARPSWVI DQTFELFDNL 151 GATDEQLDFP IVYASGLSGF AKLEETDESS
DMRPLFDTIL KYTPAPSGSA 201 DEPLQLQISQ LDYDNYTGRL GIGRILNGRI
KPGQTVAVMN HEQQIAQGRI 251 NQLLGFKGLE RVPLEEAEAG DIVIISGIED
IGIGVTITDK DNPKGLPMLS 301 VDEPTLTMDF MVNTSPLAGT EGKFVTSRQI
RDRLQKELLT NVALRVEDTA 351 DADVFRVSGR GELHLTILLE NMRREGYELA
VGKPRVVYRD IDGQKCEPYE 401 NLTVDVPDDN QGAVMEELGR RRGELTNMES
DGNGRTRLEY HIPARGLIGF 451 QGEFMTLTRG VGLMSHVFDD YAPVKPDMPG
RHNGVLVSQE QGEAVAYALW 501 NLEDRGRMFV SPNDKIYEGM IIGIHSRDND
LVVNPLKGKK LTNIRASGTD 551 EAVRLTTPIK LTLEGAVEFI DDDELVEITP
QSIRLRMRYL SELERRRHFK 601 KLD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 615>:
TABLE-US-00826 m151.seq 1 ATGAAACAAA TCCGCAACAT CGCCATCATC
GCCCACGTCG ACCACGGCAA 51 AACCACATTG GTCGACCAAC TGCTGCGCCA
ATCCGGCACA TTCCGCGCCA 101 ACCAGCAGGT TGACGAGCGC GTGATGGACA
GCAACGACCT TGAAAAAGAA 151 CGCGGCATCA CCATCCTCGC CAAAAACACC
GCCATCGATT ACGAAGGCTA 201 CCACATCAAT ATCGTCGACA CGCCGGGACA
CGCCGACTTC GGCGGCGAAG 251 TAGAGCGCGT TTTGGGGATG GTGGACTGCG
TCGTCTTGTT GGTGGACGCG 301 CAGGAAGGCC CGATGCCGCA AACCCGTTTC
GTGACCAAAA AAGCCTTGGC 351 TTTGGGGCTG AAACCGATTG TCGTCATCAA
CAAAATCGAC AAGCCGTCCG 401 CTCGTCCGAG CTGGGTTATC GACCAAACTT
TCGAGCTGTT CGACAACTTG 451 GGCGCGACCG ACGAGCAGTT GGATTTCCCG
ATTGTTTACG CTTCAGGGTT 501 GAGCGGTTTC GCCAAATTGG AAGAAACCGA
CGAGAGCAAC GACATGCGTC 551 CGCTGTTCGA TACTATCTTA AAATATACGC
CTGCACCGAG CGGCAGCGCG 601 GACGAAACGC TGCAACTGCA AATTTCCCAA
CTCGACTACG ACAACTACAC 651 CGGCCGCCTC GGTATCGGTC GTATCTTGAA
CGGACGCATC AAACCCGGCC 701 AAACCGTTGC CGTCATGAAC CACGATCAGC
AAATCGCCCA AGGCCGCATC 751 AACCAGCTTT TGGGTTTCAA AGGTTTGGAA
CGCGTGCCGC TTGAAGAAGC 801 CGAAGCCGGC GACATCGTGA TTATTTCCGG
TATCGAAGAC ATCGGTATCG 851 GCGTAACCAT CACCGACAAA GACAATCCCA
AAGGCCTACC GATGTTGAGC 901 GTGGACGAAC CGACGCTGAC GATGGACTTT
ATGGTCAACA CCAGCCCGCT 951 GGCGGGTACG GAAGGCAAAT TCGTAACCAG
CCGCCAAATC CGCGACCGCC 1001 TGCAAAAAGA ATTGCTGACC AACGTCGCCC
TGCGCGTGGA AGATACCGCC 1051 GATGCCGACG TGTTCCGCGT ATCCGGGCGC
GGCGAGCTGC ACCTGACCAT 1101 TTTGCTGGAA AACATGCGCC GCGAAGGCTA
CGAACTCGCC GTCGGCAAAC 1151 CGCGCGTCGT GTACCGCGAC ATCGACGGTC
AAAAATGCGA ACCGTATGAA 1201 AACCTGACCG TGGATGTACC CGACGACAAC
CAAGGCGCGG TAATGGAAGA 1251 ACTCGGCCGC CGCCGTGGCG AACTGACTAA
TATGGAAAGC GACGGCAACG 1301 GACGCACCCG CCTCGAATAC CATATTCCAG
CGCGCGGCTT GATCGGTTTC 1351 CAAGGCGAAT TTATGACCCT GACGCGCGGG
GTCGGGCTGA TGAGCCACGT 1401 GTTCGACGAT TACGCGCCCG TCAAACCCGA
TATGCCCGGC CGCCACAACG 1451 GCGTGCTGGT GTCCCAAGAG CAGGGCGAGG
CAGTCGCTTA CGCCTTGTGG 1501 AATCTGGAAG ACCGCGGCCG TATGTTCGTA
TCGCCCAACG ACAAAATCTA 1551 CGAAGGCATG ATTATCGGCA TCCACAGTCG
CGACAACGAT TTGGTGGTCA 1601 ACCCGCTCAA AGGCAAAAAA CTTACCAACA
TCCGTGCCAG CGGTACCGAC 1651 GAAGCCGTTC GCCTGACCAC GCCAATCAAG
CTGACGCTGG AAGGTGCGGT 1701 TGAGTTTATC GACGATGACG AACTCGTTGA
AATCACGCCG CAATCCATCC 1751 GTCTGCGCAA GCGTTACTTG AGCGAATTGG
AACGCCGCCG CCACTTTAAA 1801 AAGCTGGATT GA
This corresponds to the amino acid sequence <SEQ ID 616; ORF
151>:
TABLE-US-00827 m151.pep 1 MKQIRNIAII AHVDHGKTTL VDQLLRQSGT
FRANQQVDER VMDSNDLEKE 51 RGITILAKNT AIDYEGYHIN IVDTPGHADF
GGEVERVLGM VDCVVLLVDA 101 QEGPMPQTRF VTKKALALGL KPIVVINKID
KPSARPSWVI DQTFELFDNL 151 GATDEQLDFP IVYASGLSGF AKLEETDESN
DMRPLFDTIL KYTPAPSGSA 201 DETLQLQISQ LDYDNYTGRL GIGRILNGRI
KPGQTVAVMN HDQQIAQGRI 251 NQLLGFKGLE RVPLEEAEAG DIVIISGIED
IGIGVTITDK DNPKGLPMLS 301 VDEPTLTMDF MVNTSPLAGT EGKFVTSRQI
RDRLQKELLT NVALRVEDTA 351 DADVFRVSGR GELHLTILLE NMRREGYELA
VGKPRVVYRD IDGQKCEPYE 401 NLTVDVPDDN QGAVMEELGR RRGELTNMES
DGNGRTRLEY HIPARGLIGF 451 QGEFMTLTRG VGLMSHVFDD YAPVKPDMPG
RHNGVLVSQE QGEAVAYALW 501 NLEDRGRMFV SPNDKIYEGM IIGIHSRDND
LVVNPLKGKK LTNIRASGTD 551 EAVRLTTPIK LTLEGAVEFI DDDELVEITP
QSIRLRKRYL SELERRRHFK 601 KLD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 151
shows 99.2% identity over a 603 aa overlap with a predicted ORF
(ORF 151.ng) from N. gonorrhoeae:
TABLE-US-00828 m151/g151 10 20 30 40 50 60 m151.pep
MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
MKQIRNIAIIAHVDHGKITLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNT 10 20
30 40 50 60 70 80 90 100 110 120 m151.pep
AIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL ||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
AIDYEGCHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL 70 80
90 100 110 120 130 140 150 160 170 180 m151.pep
KPIVVINKIDKPSARPSWVIDQTFELFDNLGAIDEQLDFPIVYASGLSGFAKLEETDESN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g151
KPIVVINKIDKPSARPSWVIDQTFELFDNLGAIDEQLDFPIVYASGLSGFAKLEETDESS 130
140 150 160 170 180 190 200 210 220 230 240 m151.pep
DMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMN
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| g151
DMRPLFDTILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMN 190
200 210 220 230 240 250 260 270 280 290 300 m151.pep
HDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
HEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS 250
260 270 280 290 300 310 320 330 340 350 360 m151.pep
VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR 310
320 330 340 350 360 370 380 390 400 410 420 m151.pep
GELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
GELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGR 370
380 390 400 410 420 430 440 450 460 470 480 m151.pep
RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g151
RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG 430
440 450 460 470 480 490 500 510 520 530 540 m151.pep
RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 8151
RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKK 490
500 510 520 530 540 550 560 570 580 590 600 m151.pep
LTNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| g151
LTNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRMRYLSELERRRHFK 550
560 570 580 590 600 m151.pep KLDX |||| 8151 KLDX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 617>:
TABLE-US-00829 a151.seq 1 ATGAAACAAA TCCGCAACAT CGCCATCATC
GCCCACGTCG ACCACGGCAA 51 AACCACATTG GTCGACCAAC TGCTGCGCCA
ATCCGGCACA TTCCGCGCCA 101 ACCAGCAGGT TGACGAGCGC GTGATGGACA
GCAACGACCT TGAAAAAGAA 151 CGCGGCATCA CCATCCTCGC CAAAAACACC
GCCATCGATT ACGAAGGCTA 201 CCACATCAAT ATCGTCGACA CGCCGGGACA
CGCCGACTTC GGCGGCGAAG 251 TAGAGCGAGT TTTGGGGATG GTGGACTGCG
TCGTCTTGTT GGTGGACGCG 301 CAGGAAGGCC CGATGCCGCA AACCCGTTTC
GTGACCAAAA AAGCCTTGGC 351 TTTGGGGCTG AAACCGATTG TCGTCATCAA
TAAAATCGAC AAACCGTCCG 401 CCCGTCCGAG CTGGGTCATC GACCAAACTT
TCGAGCTGTT CGACAACTTG 451 GGCGCGACCG ACGAGCAGTT GGATTTCCCG
ATTGTTTATG CTTCCGGTCT 501 GTCCGGTTTC GCCAAATTGG AAGAAACCGA
CGAGAGCAAC GACATGCGTC 551 CGCTGTTCGA TACTATCTTA AAATATACGC
CTGCACCGAG CGGCAGCGCG 601 GACGAAACGC TGCAACTGCA AATTTCCCAA
CTCGACTACG ACAACTACAC 651 CGGCCGCCTC GGTATCGGTC GTATCTTGAA
CGGACGTATC AAGCCCGGTC 701 AAGTTGTTGC CGTCATGAAC CACGATCAAC
AAATCGCCCA AGGCCGCATC 751 AACCAGCTTT TGGGTTTCAA AGGTTTAGAA
CGCGTGCCGC TTGAAGAAGC 801 CGAAGCCGGC GACATCGTGA TTATTTCCGG
TATTGAAGAC ATCGGCATCG 851 GCGTAACCAT CACCGACAAA GACAACCCCA
AAGGCCTGCC GATGTTGAGC 901 GTGGACGAAC CGACGCTGAC GATGGACTTT
ATGGTCAACA CCAGCCCGTT 951 GGCAGGTACG GAAGGCAAAT TCGTAACCAG
CCGCCAAATC CGCGACCGCC 1001 TGCAAAAAGA ATTGCTGACC AACGTCGCCC
TGCGCGTGGA AGATACCGCC 1051 GATGCCGACG TGTTCCGCGT ATCCGGGCGC
GGCGAGCTGC ACCTGACCAT 1101 TTTGCTGGAA AACATGCGCC GCGAAGGCTA
CGAACTCGCC GTCGGCAAAC 1151 CGCGCGTCGT GTACCGCGAC ATCGACGGTC
AAAAATGCGA ACCGTATGAA 1201 AACCTGACCG TGGACGTACC CGACGACAAC
CAAGGCGCGG TAATGGAAGA 1251 ACTCGGCCGC CGCCGTGGCG AACTGACTAA
TATGGAAAGC GACGGCAACG 1301 GACGCACCCG CCTCGAATAC CATATTCCAG
CGCGCGGCTT GATCGGCTTC 1351 CAAGGCGAAT TTATGACCCT GACGCGCGGG
GTCGGGCTGA TGAGCCACGT 1401 GTTCGACGAT TACGCGCCCG TCAAACCCGA
TATGCCTGGC CGCCACAACG 1451 GCGTGCTGGT GTCCCAAGAG CAGGGCGAGG
CAGTCGCTTA CGCCTTGTGG 1501 AATCTGGAAG ACCGCGGCCG TATGTTCGTA
TCGCCCAACG ACAAAATCTA 1551 CGAAGGTATG ATTATCGGCA TCCACAGTCG
CGACAACGAT TTGGTGGTCA 1601 ACCCGCTCAA AGGCAAAAAA CTTACCAACA
TCCGTGCCAG CGGTACCGAC 1651 GAAGCCGTTC GCCTGACCAC GCCGATTAAG
CTGACGCTGG AAGGTGCGGT 1701 CGAGTTTATC GACGATGATG AGCTGGTAGA
AATCACGCCG CAATCCATCC 1751 GTCTGCGCAA GCGTTACTTG AGCGAATTGG
AACGCCGCCG CCATTTCAAA 1801 AAGCTAGATT GA
This corresponds to the amino acid sequence <SEQ ID 618; ORF
151.a>:
TABLE-US-00830 a151.pep 1 MKQIRNIAII AHVDHGKTTL VDQLLRQSGT
FRANQQVDER VMDSNDLEKE 51 RGITILAKNT AIDYEGYHIN IVDTPGHADF
GGEVERVLGM VDCVVLLVDA 101 QEGPMPQTRF VTKKALALGL KPIVVINKID
KPSARPSWVI DQTFELFDNL 151 GATDEQLDFP IVYASGLSGF AKLEETDESN
DMRPLFDTIL KYTPAPSGSA 201 DETLQLQISQ LDYDNYTGRL GIGRILNGRI
KPGQVVAVMN HDQQIAQGRI 251 NQLLGFKGLE RVPLEEAEAG DIVIISGIED
IGIGVTITDK DNPKGLPMLS 301 VDEPTLTMDF MVNTSPLAGT EGKFVTSRQI
RDRLQKELLT NVALRVEDTA 351 DADVFRVSGR GELHLTILLE NMRREGYELA
VGKPRVVYRD IDGQKCEPYE 401 NLTVDVPDDN QGAVMEELGR RRGELTNMES
DGNGRTRLEY HIPARGLIGF 451 QGEFMTLTRG VGLMSHVFDD YAPVKPDMPG
RHNGVLVSQE QGEAVAYALW 501 NLEDRGRMFV SPNDKIYEGM IIGIHSRDND
LVVNPLKGKK LTNIRASGTD 551 EAVRLTTPIK LTLEGAVEFI DDDELVEITP
QSIRLRKRYL SELERRRHFK 601 KLD* m151/a151 99.8% identity in 603 aa
overlap 10 20 30 40 50 60 m151.pep
MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNT 10 20
30 40 50 60 70 80 90 100 110 120 m151.pep
AIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
AIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL 70 80
90 100 110 120 130 140 150 160 170 180 m151.pep
KPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
KPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESN 130
140 150 160 170 180 190 200 210 220 230 240 m151.pep
DMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMN
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a151
DMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMN 190
200 210 220 230 240 250 260 270 280 290 300 m151.pep
HDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
HDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTILDKDNPKGLPMLS 250
260 270 280 290 300 310 320 330 340 350 360 m151.pep
VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADVFRVSGR 310
320 330 340 350 360 370 380 390 400 410 420 m151.pep
GELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
GELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGR 370
380 390 400 410 420 430 440 450 460 470 480 m151.pep
RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPVKPDMPG 430
440 450 460 470 480 490 500 510 520 530 540 m151.pep
RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
RHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKK 490
500 510 520 530 540 550 560 570 580 590 600 m151.pep
LTNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a151
LTNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK 550
560 570 580 590 600 m151.pep KLDX |||| a151 KLDX
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 619>:
TABLE-US-00831 g152.seq 1 ATGAAAAaca aAACCaaagt ctgGGacttc
cCcacccgcc ttTTCCactG 51 GctgcttgCC gCATCCctgc CCTTTATGTG
gtatagCGCA AAAGCCGGCG 101 GcgataTGCT GcaatgGCAC ACGCGCGTCG
GGCTGCTCGT CCTTTTCCTG 151 CTCGTATTCC GCCTCTGCTG GGGCATTTGG
GGCAgcgATA CCGCCCGTTT 201 CTCccgTtTC GTCCGAGGTT GGGCAGGTAT
ACGCGGCTAT CTGAAAAAcg 251 gCATTCCCGA ACAtatcCAG CCCGGACACA
ACCCCTTGGG CGCACTgatg 301 gtcGTTGCGC TTTTGgccgc cgtcTCATTT
CAagtcggcA CGGGGCTTTT 351 Tgccgccaat gaaaacacct tcagcaCCAa
cggctacctc aaccatttgg 401 tttccgaaca tacgGGCAGC CTTATACGGA
AAATCCACCT CAACTTTTTC 451 AAGCTGCTCG CCGTTTTTTC CGCAGTCCAC
ATCGCCGCCG TCGCCGCATA 501 CCGCATATTC AAAAAGAAAA ACCTCGTCCG
CCCGATGATA ACCGGCTTCA 551 AATACATCGA AGGCAAAACC TCAATCCGCT
TTGCCGGCAA AGCCGCGCTT 601 GCCGCCGCAT TATCGGTTGC CGCGCTTGCC
GCAGCCGCCA TCCTGCTCCT 651 GTCCTGA
This corresponds to the amino acid sequence <SEQ ID 620; ORF
152.ng>:
TABLE-US-00832 g152.pep 1 MKNKTKVWDF PTRLFHWLLA ASLPFMWYSA
KAGGDMLQWH TRVGLLVLFL 51 LVFRLCWGIW GSDTARFSRF VRGWAGIRGY
LKNGIPEHIQ PGHNPLGALM 101 VVALLAAVSF QVGTGLFAAN ENTFSTNGYL
NHLVSEHTGS LIRKIHLNFF 151 KLLAVFSAVH IAAVAAYRIF KKKNLVRPMI
TGFKYIEGKT SIRFAGKAAL 201 AAALSVAALA AAAILLLS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 621>:
TABLE-US-00833 m152.seq 1 ATGAAAAACA AAACCAAAGT CTGGGACCTC
CCCACCCGCC TTTTCCACTG 51 GCTGCTTGCC GCGTCCCTGC CCTTTATGTG
GTATAGCGCG AAAGCCGGCG 101 GCGATATGCT GCAATGGCAC ACGCGCGTCG
GGCTGTTCGT CCTTTTCCTG 151 CTCGTATTTC GCCTCTGCTG GGGCATTTGG
GGCAGCGATA CCGCCCGTTT 201 TTCCCGTTTC GTCCAAGGCT GGGCAGGCAT
ACGCGGCTAT CTGAAAAACG 251 GTATTCCCGA ACACATCCAG CCCGGACACA
ACCCCTTGGG CGCACTGATG 301 GTCGTTGCGC TTTTGGCCGC CGTGTCCTTC
CAAGTCGGCA CCGGGCTTTT 351 TGCCGCCGAT GAAAACACCT TCAGCACCAA
CGGCTACCTC AACCATTTGG 401 TTTCCGAACA TACGGGCAGC CTTATGCGGA
AAATCCACCT CAACTTTTTC 451 AAGCTGCTCG CCGTTTTTTC TGCAATCCAC
ATCGCCGCCG TCGCCGCATA 501 CCGCGTATTC AAAAAGAAAA ACCTCATCCT
CCCGATGATA ACCGGCTTCA 551 AATACATCGA AGGCAAAACC TCAATCCGCT
TTGCAGGCAA AGCCGCGCTT 601 GCCGCCGCAT TATCGGTTGC CTCGCTTGCC
GCAGCCGCCA TCCTGCTCCT 651 GTCCTGA
This corresponds to the amino acid sequence <SEQ ID 622; ORF
152>:
TABLE-US-00834 m152.pep 1 MKNKTKVWDL PTRLFHWLLA ASLPFMWYSA
KAGGDMLQWH TRVGLFVLFL 51 LVFRLCWGIW GSDTARFSRF VQGWAGIRGY
LKNGIPEHIQ PGHNPLGALM 101 VVALLAAVSF QVGTGLFAAD ENTFSTNGYL
NHLVSEHTGS LMRKIHLNFF 151 KLLAVFSAIH IAAVAAYRVF KKKNLILPMI
TGFKYIEGKT SIRFAGKAAL 201 AAALSVASLA AAAILLLS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 152
shows 95.4% identity over a 218 aa overlap with a predicted ORF
(ORF 152.ng) from N. gonorrhoeae:
TABLE-US-00835 m152/g152 10 20 30 40 50 60 m152.pep
MKNKTKVWDLPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVGLFVLFLLVFRLCWGIW
|||||||||:||||||||||||||||||||||||||||||||||||:||||||||||||| g152
MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVGLLVLFLLVFRLCWGIW 10 20
30 40 50 60 70 80 90 100 110 120 m152.pep
GSDTARFSRFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTGLFAAD
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||: 8152
GSDTARFSRFVRGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTGLFAAN 70 80
90 100 110 120 130 140 150 160 170 180 m152.pep
ENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIHIAAVAAYRVFKKKNLILPMI
|||||||||||||||||||||:||||||||||||||||:|||||||||:||||||: ||| g152
ENTFSTNGYLNHLVSEHTGSLIRKIHLNFFKLLAVFSAVHIAAVAAYRIFKKKNLVRPMI 130
140 150 160 170 180 190 200 210 219 m152.pep
TGFKYIEGKTSIRFAGKAALAAALSVASLAAAAILLLSX
|||||||||||||||||||||||||||:||||||||||| g152
TGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLSX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 623>:
TABLE-US-00836 a152.seq 1 ATGAAAAACA AAACCAAAGT CTGGGACTTC
CCCACCCGCC TTTTCCACTG 51 GCTGCTTGCC GCATCCCTAC CCTTTATGTG
GTATAGCGCG AAAACCGGCG 101 GCGATATGCT GCAATGGCAC ACGCGCGTCG
GGCTGTTTAT CCTTTTCCTG 151 CTCGTATTCC GCCTCTGCTG GGGCATTTGG
GGCAGCGATA CCGCCCGTTT 201 CTCCCGTTTC GTCCGCGGAT GGTCGGGTAT
CAGAGAGTAT ATGAAAAACG 251 GTATTCCCGA ACACGTCCAA CCCGGACACA
ACCCCTTGGG CGCACTGATG 301 GTCGTTGCGC TTTTGGCCGC CGTGTCGTTC
CAAGTCGGCA CAGGGCTTTT 351 TGCCGCCGAT GTAAACACCT TCAGCACCAA
CGGCTACCTC AACCATTTGG 401 TTTCCGAACA TACGGGCAGC CTTATGCGGA
AAATCCATCT CAACTTTTTC 451 AAACTGCTCG CCGTTTTTTC CGCAGTCCAC
ATCGCCGNCG TCGCCGCATA 501 CCGCGTGTTC AAAAAGAAAA ACCTCGTCCT
CCCGATGATA ACCGGCTTCA 551 AATACATCGA AGGCAAAACC TCAATCCGCT
TTGCCGGCAA AGCCGCGCTT 601 GCCGCCGCAT TATCGGTTGC CGCGCTTGCC
GCAGCCGCCA TCCTGCTCCT 651 GTCCTGA
This corresponds to the amino acid sequence <SEQ ID 624; ORF
152.a>:
TABLE-US-00837 a152.pep 1 MKNKTKVWDF PTRLFHWLLA ASLPFMWYSA
KTGGDMLQWH TRVGLFILFL 51 LVFRLCWGIW GSDTARFSRF VRGWSGIREY
MKNGIPEHVQ PGHNPLGALM 101 VVALLAAVSF QVGTGLFAAD VNTFSTNGYL
NHLVSEHTGS LMRKIHLNFF 151 KLLAVFSAVH IAXVAAYRVF KKKNLVLPMI
TGFKYIEGKT SIRFAGKAAL 201 AAALSVAALA AAAILLLS* m152/a152 94.0%
identity in 218 aa overlap 10 20 30 40 50 60 m152.pep
MKNKTKVWDLPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVGLFVLFLLVFRLCWGIW
|||||||||:|||||||||||||||||||||:||||||||||||||:||||||||||||| a152
MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVGLFILFLLVFRLCWGIW 10 20
30 40 50 60 70 80 90 100 110 120 m152.pep
GSDTARFSRFVQGWAGIRGYLKNGIPEHIQPGHNPLGALMVVALLAAVSFQVGTGLFAAD
|||||||||||:||:||| |:|||||||:||||||||||||||||||||||||||||||| a152
GSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVVALLAAVSFQVGTGLFAAD 70 80
90 100 110 120 130 140 150 160 170 180 m152.pep
ENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIHIAAVAAYRVFKKKNLILPMI
|||||||||||||||||||||||||||||||||||||:||| ||||||||||||:|||| a152
VNTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAVHIAXVAAYRVFKKKNLVLPMI 130
140 150 160 170 180 190 200 210 219 m152.pep
TGFKYIEGKTSIRFAGKAALAAALSVASLAAAAILLLSX
|||||||||||||||||||||||||||:||||||||||| a152
TGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLSX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 625>:
TABLE-US-00838 g153.seq 1 atggggtttg cttaCAgtat gacgtatatc
gaggtCGGGa taccggaggc 51 ggcatccgtc ctttCgctGC CCGAGATgat
gcgcctgatG GTGTTtCagg 101 attATGGTTT TttggcCGAA GTGATGTTTG
TGctgaCTTT cGGCGcgcCG 151 GTTCTGTTtC TGCTGCTGTG CCTGTATGTC
TATGCCGCGC TGATACGGAA 201 ACAGGCGTAT CCTGCGCTGC GTTTGGCAAC
GCGTGTGATG GTGCGCTTGA 251 GGCAGGCGAT GATGGTGGAT GTGTTTTTTG
TTTCCACTCT GGTGGCGTAT 301 ATCAAGCTCT CGTCTGTGGC AAAGGTTCGC
TTCGGGCCGG CGTTTTATCT 351 GATGTTCGCG CTGTCGGTTA TGCTGATTCG
GACTTCGGTA TCGGTTCCCC 401 AGCATTGGGT GTATTTCCAA ATCGGGCGGC
TGACGGGGAA TAATGCGGTT 451 CAGACGGCAT CGGAAGGCAA AACCTGTTGC
AGCCGCTGCC TGTATTTccg 501 cgacAGTgcc gaatccCCCT GCGGGGTGTg
cgGCGcggaA CTgtacggcg 551 gacggccgaa aagtCTGAGt atttCgtCGG
CGTTTCTgac ggcggcggTT 601 GTTTTGTATT TCCctgCcaa TATCctgccg
attaTGAttt cgtccAATCc 651 tgccgccacg GAGGcCAACA CCATCTTTAG
CGGCATCGCT TATATGTGGG 701 ACGagggcgA CAGGCTGATT GCGGCGGTTA
TTTTCAGCGC GAGTATTTTG 751 GTGCCGGTGC TGAAGATTGC GGCAATGTCG
GTTTTGATTG CGGCGGCACG 801 GTTCGCTTTG CCGGCGGGCG CAAAGAAATT
GTCGCACCTC tacCGCATCA 851 CCGAAGCGGT CGGCCGCTGG TCGATGATTG
ATATTTTTGT GATTATTATT 901 TTGATGTGTT CGTTCCacaC TTATGCCGCG
CGCGTCATTC CGGGCAGTGC 951 GGCAGTCTAT TTCTGCCTGG TCGTGATTTT
GACGATGCTG TCCGCCTATT 1001 ATTTCGACCC GCGCCTGCTT TGGGACAAAC
GCGCTTCAGA CGGCATTGCT 1051 TTCAACGAAA CGGAAAAATA TGACTGA
This corresponds to the amino acid sequence <SEQ ID 626; ORF
153.ng>:
TABLE-US-00839 g153.pep 1 MGFAYSMTYI EVGIPEAASV LSLPEMMRLM
VFQDYGFLAE VMFVLTFGAP 51 VLFLLLCLYV YAALIRKQAY PALRLATRVM
VRLRQAMMVD VFFVSTLVAY 101 IKLSSVAKVR FGPAFYLMFA LSVMLIRTSV
SVPQHWVYFQ IGRLTGNNAV 151 QTASEGKTCC SRCLYFRDSA ESPCGVCGAE
LYGGRPKSLS ISSAFLTAAV 201 VLYFPANILP IMISSNPAAT EANTIFSGIA
YMWDEGDRLI AAVIFSASIL 251 VPVLKIAAMS VLIAAARFAL PAGAKKLSHL
YRITEAVGRW SMIDIFVIII 301 LMCSFHTYAA RVIPGSAAVY FCLVVILTML
SAYYFDPRLL WDKRASDGIA 351 FNETEKYD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 627>:
TABLE-US-00840 m153.seq 1 ATGGCGTTTG CTTACGGTAT GACGTATATC
GAGGTCGGGA TACCGGGTGC 51 GGCATCCGTC CTTTCGCTGC CCGAGATGAT
GCGCCTGATG GTGTTTCAGG 101 ATTATGGTTT TTTGGCCGAA GTGATGTTTG
TGCTGACTTT CGGCGCGCCG 151 GTTCTGTTTC TGCTGCTGTG CCTGTATGTC
TATGCCGCGC TGATACGGAA 201 ACAGGCGTAT CCTGCGCTGC GTTTGGCAAC
GCGTGTGATG GTGCGCTTGA 251 GACAGGCGAT GATGGTGGAT GTGTTTTTTG
TTTCCACTTT GGTGGCGTAT 301 ATCAAGCTCT CGTCTGTGGC AGAGGTTCGC
TTCGGGCCGG CGTTTTATCT 351 GATGTTCGCG CTGTCAGTTA TGCTGATTCG
GACTTCGGTA TCGGTTCCCC 401 AGCATTGGGT GTATTTTCAA ATCGGGCGGC
TGACGGGGGA TAATGCGGTT 451 CAGACGGCAT CGGAAGGTAA AACCTGTTGC
AGCCGCTGCC TGTATTTCCG 501 CGACAGTGCC GAATCCCCCT GCGGCGTGTG
CGGTGCGGAA CTGTACCGCC 551 GACGGCCGAA AAGTCTGAGT ATTTCGTCGG
CGTTTCTGAC GGCGGCGGTT 601 ATTTTGTATT TCCCTGCCAA TATCCTGCCG
ATTATGATTT CGTCCAATCC 651 TGCCGCCACG GAGGTCAATA CCATCCTTAA
CGGCATCGCT TATATGTGGG 701 ACGAGGGCGA CAGGCTGATT GCGGCGGTTA
TTTTCAGCGC GAGTATTTTG 751 GTGCCGGTAC TGAAGATTGC GGCAATGTCG
GTTTTGATTG CGTCCGCCCG 801 CTTCGCTTTG CCAACGGGTG CAAAGAAATT
GTCGCACCTC TACCGCATCA 851 CCGAAGCGGT CGGCCGCTGG TCGATGATTG
ATATTTTTGT GATTATTATT 901 TTGATGTGTT CGTTCCACAC TTATGCCGCG
CGCGTCATTC CGGGCAGTGC 951 GGCAGTCTAT TTCTGCCTGG TCGTGATTCT
GACGATGCTG TCCGCCTATT 1001 ATTTCGACCC GCGCCTGCTT TGGGACAAAC
GCGCTTCAGA CGGCATTGCT 1051 TTCAATGAAA CGGAAAAACA TGACTGA
This corresponds to the amino acid sequence <SEQ ID 628; ORF
153>:
TABLE-US-00841 m153.pep 1 MAFAYGMTYI EVGIPGAASV LSLPEMMRLM
VFQDYGFLAE VMFVLTFGAP 51 VLFLLLCLYV YAALIRKQAY PALRLATRVM
VRLRQAMMVD VFFVSTLVAY 101 IKLSSVAEVR FGPAFYLMFA LSVMLIRTSV
SVPQHWVYFQ IGRLTGDNAV 151 QTASEGKTCC SRCLYFRDSA ESPCGVCGAE
LYRRRPKSLS ISSAFLTAAV 201 ILYFPANILP IMISSNPAAT EVNTILNGIA
YMWDEGDRLI AAVIFSASIL 251 VPVLKIAAMS VLIASARFAL PTGAKKLSHL
YRITEAVGRW SMIDIFVIII 301 LMCSFHTYAA RVIPGSAAVY FCLVVILTML
SAYYFDPRLL WDKRASDGIA 351 FNETEKHD* m153/g153 96.1% identity in 358
aa overlap 10 20 30 40 50 60 m153.pep
MAFAYGMLYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYV
|:|||:||||||||| |||||||||||||||||||||||||||||||||||||||||||| g153
MGFAYSMTYIEVGIPEAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYV 10 20
30 40 50 60 70 80 90 100 110 120 m153.pep
YAALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGPAFYLMFA
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| g153
YAALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAKVRFGPAFYLMFA 70 80
90 100 110 120 130 140 150 160 170 180 m153.pep
LSVMLIRTSVSVPQHWVYFQIGRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAE
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| g153
LSVMLIRTSVSVPQHWVYFQIGRLTGNNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAE 130
140 150 160 170 180 190 200 210 220 230 240 m153.pep
LYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLI ||
||||||||||||||||:||||||||||||||||||||:|||::||||||||||||| g153
LYGGRPKSLSISSAFLTAAVVLYFPANILPIMISSNPAATEANTIFSGIAYMWDEGDRLI 190
200 210 220 230 240 250 260 270 280 290 300 m153.pep
AAVIFSASILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIII
||||||||||||||||||||||||:||||||:|||||||||||||||||||||||||||| g153
AAVIFSASILVPVLKIAAMSVLIAAARFALPAGAKKLSHLYRITEAVGRWSMIDIFVIII 250
260 270 280 290 300 310 320 330 340 350 359 m153.pep
LMCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHDX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g153
LMCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYDX 310 320
330 340 350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 629>:
TABLE-US-00842 a153.seq 1 ATGGCGTTTG CTTACGGTAT GACGTATATC
GAGGTCGGGA TACCGGGTGC 51 GGCATCCGTC CTTTCGCTGC CCGAGATGAT
GCGCCTGATG GTGTTTCAGG 101 ATTATGGTTT TTTGGCCGAA GTGATGTTTG
TGCTGACCTT CGGCGCGCCG 151 GTTCTGTTTC TGCTGCTGTG CCTGTATGTC
TATGCCGCGC TGATACGGAA 201 ACAGGCGTAT CCTGCGCTGC GTTTGGCAAC
GCGTGTGATG GTGCGCTTGA 251 GACAGGCGAT GATGGTGGAT GTGTTTTTTG
TTTCCACTTT GGTGGCGTAT 301 ATCAAGCTCT CGTCTGTGGC AGAGGTTCGC
TTCGGATCGG CGTTTTATCT 351 GATGTTCGCG CTGTCGGTTA TGCTGATTCG
GACTTCGGTA TCGGTTCCCC 401 AGCATTGGGT GTATTTTCAA ATCGGGCGGC
TGACGGGGGA TAATGCGGTT 451 CAGACGGCAT CGGAAGGTAA AACCTGTTGC
AGCCGCTGCC TGTATTTCCG 501 CGACAGTGCC GAATCCCCCT GCGGCGTGTG
CGGTGCGGAA CTGTACCGCC 551 GACGGCCGAA AAGTCTGAGT ATTTCGTCGG
CGTTTCTGAC GGCGGCGGTT 601 ATTTTGTATT TCCCTGCCAA TATCCTGCCG
ATTATGATTT CGTCCAATCC 651 TGCCGCCACG GAGGTCAATA CCATCCTTAA
CGGCATCGCT TATATGTGGG 701 ACGAGGGCGA CAGGCTGATT GCGGCGGTTA
TTTTCAGCGC GAGTATTTTG 751 GTGCCGGTAC TGAAGATTGC GGCAATGTCG
GTTTTGATTG CGTCCGCCCG 801 CTTCGCTTTG CCAACGGGTG CAAAGAAATT
GTCGCACCTC TACCGCATCA 851 CCGAAGCGGT CGGCCGCTGG TCGATGATTG
ATATTTTTGT GATTATTATT 901 TTGATGTGTT CGTTCCACAC TTATGCCGCG
CGCGTCATTC CGGGCAGTGC 951 GGCAGTCTAT TTCTGCCTGG TCGTGATTCT
GACGATGCTG TCCGCCTATT 1001 ATTTCGACCC GCGCCTGCTT TGGGACAAAC
GCGCTTCAGA CGGCATTGCT 1051 TTCAATGAAA CGGAAAAACA TGACTGA
This corresponds to the amino acid sequence <SEQ ID 630; ORF
153.a>:
TABLE-US-00843 a153.pep 1 MAFAYGMTYI EVGIPGAASV LSLPEMMRLM
VFQDYGFLAE VMFVLTFGAP 51 VLFLLLCLYV YAALIRKQAY PALRLATRVM
VRLRQAMMVD VFFVSTLVAY 101 IKLSSVAEVR FGSAFYLMFA LSVMLIRTSV
SVPQHWVYFQ IGRLTGDNAV 151 QTASEGKTCC SRCLYFRDSA ESPCGVCGAE
LYRRRPKSLS ISSAFLTAAV 201 ILYFPANILP IMISSNPAAT EVNTILNGIA
YMWDEGDRLI AAVIFSASIL 251 VPVLKIAAMS VLIASARFAL PTGAKKLSHL
YRITEAVGRW SMIDIFVIII 301 LMCSFHTYAA RVIPGSAAVY FCLVVILTML
SAYYFDPRLL WDKRASDGIA 351 FNETEKHD* m153/a153 99.7% identity in 358
aa overlap 10 20 30 40 50 60 m153.pep
MAFAYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a153
MAFAYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYV 10 20
30 40 50 60 70 80 90 100 110 120 m153.pep
YAALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGPAFYLMFA
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| a153
YAALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGSAFYLMFA 70 80
90 100 110 120 130 140 150 160 170 180 m153.pep
LSVMLIRTSVSVPQHWVYFQIGRLIGDNAVQTASEGKICCSRCLYFRDSAESPCGVCGAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a153
LSVMLIRTSVSVPQHWVYFQIGRLIGDNAVQTASEGKICCSRCLYFRDSAESPCGVCGAE 130
140 150 160 170 180 190 200 210 220 230 240 m153.pep
LYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a153
LYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLI 190
200 210 220 230 240 250 260 270 280 290 300 m153.pep
AAVIFSASILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIII
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a153
AAVIFSASILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIII 250
260 270 280 290 300 310 320 330 340 350 359 m153.pep
LMCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHDX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a153
LMCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHDX 310 320
330 340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 631>:
TABLE-US-00844 g154.seq 1 ATGACTGACA ACAGCCCTCC TCCAAACGGA
CACGCTCAAG CACGCGTCCG 51 CAAAAACAAC accttcctCT CCGCCGTCTG
GCTGGTCCCG CTGATCGCGC 101 TGATTGCCGG CGGCTGGCTT TGGGTTAAGG
AAATCCGCAA CAGGGGGCCT 151 GTGGTTACGC TCTTGATGGA CAGCGCGGAA
GGCATCGAAG TCAACAATAC 201 GGTCATTAAG GTATTGAGCA TCGATGTCGG
ACGCGTTACC CGAATCAAAC 251 TGCGCGACGA CCAAAAAGGC GTGGAAGTTA
CTGCCCAACT CAATGCGGAC 301 GTATCCGGCC TCATCCGCAG CGATACCCAG
TTTTGGGTGG TCAAGCCGCG 351 TATCGACCAA AGCGGcgtAA CCGGTTTGGG
TACGCTGCTT TCGGGTTCGT 401 ACATCGCTTT TACACCCGGC AAAAGCGGCG
AGGCAAAAGA CGTGTTCCAA 451 GTGCAGGACA TTCCGCCCGT TACCGCCATC
GGGCAAAgcg GGCTGCGCTT 501 GAATTTGATT GGTAAAAACG AccgCATCCT
CAACGTcaaC AGCCCTGTTT 551 TGTATGAAAA CTTTATGGTC GGGCAAATCG
AAAGCGCGCA TTTCGAcccG 601 TCCGACCAAA GCGTGCATTA CACCATCTTC
ATCCAAAGCC CCAACGACAA 651 ACTGATTCAT TCCGCCAGCC GTTTTTGGCT
GGAAAGCGGC ATCAATATCG 701 AAACCACAGG CAGCGGCATC AAACTCAATT
CCGCCCCTCT GCCTGCCCTG 751 CTGTCAGGCG CGATTTCATT TGATTCGCCG
AAAACCAAAA ACAGTAAAAA 801 CGTCAAAAGC GAGGACAGCT TCACGCTTTA
CGACAGCCGC AGCGAAATCG 851 CCAACCTGCC TGACGACCGC TCGCTGTACT
ACACCGCGTT TTTCAAACAA 901 TCCGTGCGCG GACTGACCGT cggTTCGCCT
GTcgaATACA AAGGGCtgaA 951 TGTcggCATG GTTTCCGATG TCCCTTATTT
TGACCGCAAt gacagCCTGC 1001 ACCtgtTTGA aaacggctgg aTTcccGtac
gCATCCGCAT cgagccTTCC 1051 CGTTTGGAAA TCAATGCCGA CGAGCAAAGC
AAAGAGCATT GGAAACAACA 1101 ATTCCAGACG GCCTTAAACA AAGGCCTGAC
CGCCACCATC TCCAGCAACA 1151 ACCTGCTGAC CGGCGGCAAA ATGATTGAGT
TGAACGATCA GCCTTCCGCC 1201 TCGCCCAAGC TGCGACCGCA TACCGTTTAT
GCAGGCGATA CCGTCATCGC 1251 CACACGGGGC GGCGGTTTGG ATGACTTGCA
GGTCAAATTG GCGGATTTGC 1301 TGGACaaatT CAACAATCTG CCATTggata
aAACCGTTGC CGAATTGAAC 1351 GGCTCGCTCG CCGAACTCAA GTCCGCACTC
AAATCCGCCA ATGCCGCCCT 1401 AAGCTCCATT GacaAACTGG TCGgcaaTCC
GCAGACGCAA AACATCCCGA 1451 ACGAACTGAA CCAAACTCTG AAAGAGTTGC
GCATAACCCT GCAAGGCGTA 1501 TCGcctCAAT CGCCTATCTa cgGAgacgta
caAAATAcgc tgCaAAGTTT 1551 GGACAAAACC TTAAAagacg TtcaACCCGT
CATTAACACT TTGAaAGAAa 1601 aacCCaaCgc actGATTTtc aacaACAGCA
GCAAAGAccc tATCCCGAAA 1651 GGAAGCCGAT AA
This corresponds to the amino acid sequence <SEQ ID 632; ORF
154.ng>:
TABLE-US-00845 g154.pep 1 MTDNSPPPNG HAQARVRKNN TFLSAVWLVP
LIALIAGGWL WVKEIRNRGP 51 VVTLLMDSAE GIEVNNTVIK VLSIDVGRVT
RIKLRDDQKG VEVTAQLNAD 101 VSGLIRSDTQ FWVVKPRIDQ SGVTGLGTLL
SGSYIAFTPG KSGEAKDVFQ 151 VQDIPPVTAI GQSGLRLNLI GKNDRILNVN
SPVLYENFMV GQIESAHFDP 201 SDQSVHYTIF IQSPNDKLIH SASRFWLESG
INIETTGSGI KLNSAPLPAL 251 LSGAISFDSP KTKNSKNVKS EDSFTLYDSR
SEIANLPDDR SLYYTAFFKQ 301 SVRGLTVGSP VEYKGLNVGM VSDVPYFDRN
DSLHLFENGW IPVRIRIEPS 351 RLEINADEQS KEHWKQQFQT ALNKGLTATI
SSNNLLTGGK MIELNDQPSA 401 SPKLRPHTVY AGDTVIATRG GGLDDLQVKL
ADLLDKFNNL PLDKTVAELN 451 GSLAELKSAL KSANAALSSI DKLVGNPQTQ
NIPNELNQTL KELRITLQGV 501 SPQSPIYGDV QNTLQSLDKT LKDVQPVINT
LKEKPNALIF NNSSKDPIPK 551 GSR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 633>:
TABLE-US-00846 m154.seq 1 ATGACTGACA ACAGCCCTCC TCCAAACGGA
CACGCCCAAG CACGCGTCCG 51 CAAAAACAAC ACCTTCCTCT CTGCCGTCTG
GCTGGTTCCG CTGATCGCGC 101 TGATTGCCGG CGGCTGGCTT TGGGTTAAGG
AAATCCGCAA CAGGGGGCCT 151 GTGGTTACGC TCTTGATGGA CAGCGCGGAA
GGCATTGAGG TCAACAATAC 201 GGTCATCAAA GTATTGAGCA TCGATGTCGG
ACGCGTTACC CGAATCAAAC 251 TGCGCGACGA CCAAAAAGGC GTGGAAGTAA
CCGCCCAACT CAATGCGGAC 301 GTATCCGGCC TCATCCGCAG CGATACCCAG
TTTTGGGTGG TCAAGCCGCG 351 TATCGACCAA AGCGGCGTAA CCGGTTTGGG
TACGCTGCTT TCGGGTTCGT 401 ACATCGCCTT TACACCCGGC AAAAGCGACG
AGGCAAAAGA CGTGTTCCAA 451 GTGCAGGACA TTCCGCCCGT TACCGCCATC
GGGCAAAGCG GGCTGCGCTT 501 GAATTTGATT GGTAAAAACG ACCGCATCCT
CAACGTCAAC AGCCCTGTTT 551 TGTATGAAAA TTTTATGGTC GGGCAAGTCG
AAAGCGCGCA TTTCGACCCG 601 TCCGACCAAA GCGTGCATTA CACCATCTTC
ATCCAAAGCC CCAACGACAA 651 ACTGATTCAT TCCGCCAGCC GTTTTTGGCT
GGAAAGCGGC ATCAATATCG 701 AAACCACAGG CAGCGGCATC AAACTCAATT
CCGCCCCTCT GCCTGCCCTG 751 CTGTCGGGCG CGATTTCATT TGATTCGCCG
AAAACCAAAA ACAGTAAAAA 801 CGTCAAAAGC GAAGACAGCT TCACGCTTTA
CGACAGCCGC AGCGAAGTCG 851 CCAACCTGCC TGACGACCGC TCGCTGTACT
ACACCGCGTT TTTCAAACAA 901 TCCGTGCGCG GCCTGACCGT CGGTTCGCCC
GTCGAGTACA AAGGGCTGAA 951 TGTCGGCGTG GTTTCCGACG TTCCTTATTT
CGACCGCAAC GACAGCCTGC 1001 ACCTGTTTGA AAACGGCTGG ATACCCGTAC
GCATCCGCAT TGAACCTTCC 1051 CGTTTGGAAA TCAATGCCGA CGAACAAAGC
AAAGAACATT GGAAACAACA 1101 ATTTCAGACG GCCTTAAACA AAGGCCTGAC
CGCCACCATC TCCAGCAACA 1151 ACCTGCTGAC CGGAAGCAAA ATGATTGAGT
TGAACGATCA GCCTTCCGCA 1201 TCACCTAAGC TGCGACCGCA TACCGTTTAT
GCAGGCGATA CCGTTATCGC 1251 GACCCAGGGC GGCGGTTTGG ACGATTTGCA
GGTCAAATTG GCGGATTTGC 1301 TGGACAAGTT CGACAAACTG CCTTTAGATA
AGACGGTTGC CGAATTGAAC 1351 GGTTCGCTTG CCGAGCTCAA ATCCACACTC
AAATCTGCCA ATGCCGCCCT 1401 AAGCTCCATC GACAAACTGG TCGGCAAACC
GCAGACACAA AACATTCCGA 1451 ACGAACTGAA CCAAACCCTG AAAGAGTTGC
GCACAACCCT GCAAGGCGTA 1501 TCGCCGCAAT CGCCTATCTA CGGCGACGTA
CAAAATACGC TGCAAAGTTT 1551 GGACAAAACT TTAAAAGACG TTCAACCCGT
GATTAATACT TTGAAAGAAA 1601 AACCCAACGC GCTGATTTTC AACAGCAGCA
GCAAAGACCC TATCCCGAAA 1651 GGAAGCCGAT AA
This corresponds to the amino acid sequence <SEQ ID 634 ORF
154.a>:
TABLE-US-00847 m154.pep 1 MTDNSPPPNG HAQARVRKNN TFLSAVWLVP
LIALIAGGWL WVKEIRNRGP 51 VVTLLMDSAE GIEVNNTVIK VLSIDVGRVT
RIKLRDDQKG VEVTAQLNAD 101 VSGLIRSDTQ FWVVKPRIDQ SGVTGLGTLL
SGSYIAFTPG KSDEAKDVFQ 151 VQDIPPVTAI GQSGLRLNLI GKNDRILNVN
SPVLYENFMV GQVESAHFDP 201 SDQSVHYTIF IQSPNDKLIH SASRFWLESG
INIETTGSGI KLNSAPLPAL 251 LSGAISFDSP KTKNSKNVKS EDSFTLYDSR
SEVANLPDDR SLYYTAFFKQ 301 SVRGLTVGSP VEYKGLNVGV VSDVPYFDRN
DSLHLFENGW IPVRIRIEPS 351 RLEINADEQS KEHWKQQFQT ALNKGLTATI
SSNNLLTGSK MIELNDQPSA 401 SPKLRPHTVY AGDTVIATQG GGLDDLQVKL
ADLLDKFDKL PLDKTVAELN 451 GSLAELKSTL KSANAALSSI DKLVGKPQTQ
NIPNELNQTL KELRTTLQGV 501 SPQSPIYGDV QNTLQSLDKT LKDVQPVINT
LKEKPNALIF NSSSKDPIPK 551 GSR* m154/g154 97.8% identity in 553 aa
overlap 10 20 30 40 50 60 m154.pep
MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRGPVVTLLMDSAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g154
MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRGPVVTLLMDSAE 10 20
30 40 50 60 70 80 90 100 110 120 m154.pep
GIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVSGLIRSDTQFWVVKPRIDQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g154
GIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVSGLIRSDTQFWVVKPRIDQ 70 80
90 100 110 120 130 140 150 160 170 180 m154.pep
SGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVN
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| g154
SGVTGLGTLLSGSYIAFTPGKSGEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVN 130
140 150 160 170 180 190 200 210 220 230 240 m154.pep
SPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGI
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| g154
SPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGI 190
200 210 220 230 240 250 260 270 280 290 300 m154.pep
KLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQ
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| g154
KLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEIANLPDDRSLYYTAFFKQ 250
260 270 280 290 300 310 320 330 340 350 360 m154.pep
SVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQS
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| g154
SVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQS 310
320 330 340 350 360 370 380 390 400 410 420 m154.pep
KEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQG
||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||:| g154
KEHWKQQFQTALNKGLTATISSNNLLTGGKMIELNDQPSASPKLRPHTVYAGDTVIATRG 370
380 390 400 410 420 430 440 450 460 470 480 m154.pep
GGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDKLVGKPQTQ
|||||||||||||||||::|||||||||||||||||||:||||||||||||||||:|||| g154
GGLDDLQVKLADLLDKFNNLPLDKTVAELNGSLAELKSALKSANAALSSIDKLVGNPQTQ 430
440 450 460 470 480 490 500 510 520 530 540 m154.pep
NIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSLDKTLKDVQPVINTLKEKPNALIF
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| g154
NIPNELNQTLKELRITLQGVSPQSPIYGDVQNTLQSLDKTLKDVQPVINTLKEKPNALIF 490
500 510 520 530 540 550 m154.pep NSSSKDPIPKGSRX |:|||||||||||| g154
NNSSKDPIPKGSRX 550
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 635>:
TABLE-US-00848 a154.seq 1 ATGACTGACA ACAGCCCTCC TCCAAACGGA
CACGCCCAAG CACGCGTCCG 51 CAAAAACAAC ACCTTCCTCT CTGCCGTCTG
GCTGGTTCCG CTGATCGCGC 101 TGATTGCCGG CGGCTGGCTT TGGGTTAAGG
AAATCCGCAA CAGGGGGCCT 151 GTGGTTACGC TCTTGATGGA CAGCGCGGAA
GGCATTGAGG TCAACAATAC 201 GGTCATCAAA GTATTGAGCA TCGATGTCGG
ACGCGTTACC CGAATCAAAC 251 TGCGCGACGA CCAAAAAGGC GTGGAAGTAA
CCGCCCAACT CAATGCGGAC 301 GTATCCGGCC TCATCCGCAG CGATACCCAG
TTTTGGGTGG TCAAGCCGCG 351 TATCGACCAA AGCGGCGTAA CCGGTTTGGG
TACGCTGCTT TCGGGTTCGT 401 ACATCGCCTT TACACCCGGC AAAAGCGACG
AGGCAAAAGA CGTGTTCCAA 451 GTGCAGGACA TTCCGCCCGT TACCGCCATC
GGGCAAAGCG GGCTGCGCTT 501 GAATTTGATT GGTAAAAACG ACCGCATCCT
CAACGTCAAC AGCCCTGTTT 551 TGTATGAAAA CTTTATGGTC GGGCAAGTCG
AAAGCGCGCA TTTCGACCCG 601 TCCGACCAAA GCGTGCATTA CACCATCTTC
ATCCAAAGCC CCAACGACAA 651 ACTGATTCAT TCCGCCAGCC GTTTCTGGCT
GGAAAGCGGC ATCAATATCG 701 AAACCACAGG CAGCGGCATC AAACTCAATT
CCGCCCCTCT GCCTGCCCTG 751 CTGTCGGGCG CGATTTCATT TGATTCGCCG
AAAACCAAAA ACAGTAAAAA 801 CGTCAAAAGC GAAGACAGCT TCACGCTTTA
CGACAGCCGC AGCGAAGTCG 851 CCAACCTGCC TGATGACCGT TCGCTGTACT
ACACCGCGTT TTTCAAACAA 901 TCCGTGCGCG GACTGACCGT CGGTTCGCCT
GTCGAGTACA AAGGGCTGAA 951 TGTCGGCGTG GTTTCCGATG TTCCTTATTT
CGACCGCAAC GACAGCCTGC 1001 ACCTGTTTGA AAACGGCTGG ATTCCCGTAC
GCATCCGTAT TGAGCCTTCC 1051 CGTTTGGAAA TCAATGCCGA CGAACAAAGC
AAAGAACATT GGAAACAACA 1101 ATTTCAGACG GCCTTAAACA AAGGCCTGAC
CGCCACCATC TCCAGCAACA 1151 ACCTGCTGAC CGGCAGCAAA ATGATTGAGT
TGAACGATCA GCCTTCCGCC 1201 TCGCCCAAGC TGCGACCGCA TACCGTTTAT
GCAGGCGATA CCGTTATCGC 1251 GACCCAGGGC GGCGGTTTGG ACGATTTGCA
GGTCAAATTG GCGGATTTGC 1301 TGGACAAGTT CGACAAACTG CCTTTAGATA
AGACGGTTGC CGAATTGAAC 1351 GGTTCGCTTG CCGAGCTCAA ATCCACACTC
AAATCTGCCA ATGCCGCCCT 1401 AAGCTCCATC GACAAACTGG TCGGCAAACC
GCAGACACAA AACATTCCGA 1451 ACGAACTGAA CCAAACCCTG AAAGAGTTGC
GCACAACCCT GCAAGGCGTA 1501 TCGCCTCAAT CGCCTATCTA CGGCGACGTA
CAAAATACGC TGCAAAGTTT 1551 GGACAAAACC TTAAAAGACG TTCAACCCGT
CATTAACACT TTGAAAGAAA 1601 AACCCAACGC GCTGATTTTC AACAGCAGCA
GCAAAGACCC TATCCCGAAA 1651 GGAAGCCGAT AA
This corresponds to the amino acid sequence <SEQ ID 636; ORF
154.a>:
TABLE-US-00849 a154.pep 1 MTDNSPPPNG HAQARVRKNN TFLSAVWLVP
LIALIAGGWL WVKEIRNRGP 51 VVTLLMDSAE GIEVNNTVIK VLSIDVGRVT
RIKLRDDQKG VEVTAQLNAD 101 VSGLIRSDTQ FWVVKPRIDQ SGVTGLGTLL
SGSYIAFTPG KSDEAKDVFQ 151 VQDIPPVTAI GQSGLRLNLI GKNDRILNVN
SPVLYENFMV GQVESAHFDP 201 SDQSVHYTIF IQSPNDKLIH SASRFWLESG
INIETTGSGI KLNSAPLPAL 251 LSGAISFDSP KTKNSKNVKS EDSFTLYDSR
SEVANLPDDR SLYYTAFFKQ 301 SVRGLTVGSP VEYKGLNVGV VSDVPYFDRN
DSLHLFENGW IPVRIRIEPS 351 RLEINADEQS KEHWKQQFQT ALNKGLTATI
SSNNLLTGSK MIELNDQPSA 401 SPKLRPHTVY AGDTVIATQG GGLDDLQVKL
ADLLDKFDKL PLDKTVAELN 451 GSLAELKSTL KSANAALSSI DKLVGKPQTQ
NIPNELNQTL KELRTTLQGV 501 SPQSPIYGDV QNTLQSLDKT LKDVQPVINT
LKEKPNALIF NSSSKDPIPK 551 GSR* m154/a154 100.0% identity in 553 aa
overlap 10 20 30 40 50 60 m154.pep
MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRGPVVTLLMDSAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRGPVVTLLMDSAE 10 20
30 40 50 60 70 80 90 100 110 120 m154.pep
GIEVNNTVIKVLSIDVGRVIRIKLRDDQKGVEVTAQLNADVSGLIRSDTQFWVVKPRIDQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
GIEVNNTVIKVLSIDVGRVIRIKLRDDQKGVEVTAQLNADVSGLIRSDTQFWVVKPRIDQ 70 80
90 100 110 120 130 140 150 160 170 180 m154.pep
SGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
SGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVN 130
140 150 160 170 180 190 200 210 220 230 240 m154.pep
SPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
SPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGI 190
200 210 220 230 240 250 260 270 280 290 300 m154.pep
KLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
KLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQ 250
260 270 280 290 300 310 320 330 340 350 360 m154.pep
SVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
SVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQS 310
320 330 340 350 360 370 380 390 400 410 420 m154.pep
KEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
KEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQG 370
380 390 400 410 420 430 440 450 460 470 480 m154.pep
GGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDKLVGKPQTQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
GGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDKLVGKPQTQ 430
440 450 460 470 480 490 500 510 520 530 540 m154.pep
NIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSLDKTLKDVQPVINTLKEKPNALIF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a154
NIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSLDKTLKDVQPVINTLKEKPNALIF 490
500 510 520 530 540 550 m154.pep NSSSKDPIPKGSRX |||||||||||||| a154
NSSSKDPIPKGSRX 550
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 637>:
TABLE-US-00850 g155.seq 1 atGAAaatcg GtatcCCACG CGAGTCAtta
tcCGGCGAAA cccgcgtagc 51 ctgcAcgccc gCCACCGTTG CCctgctggg
caAactAGGC TTTGAAACCG 101 TTGtcgaAAG CGGTGCAggt TTGGCGGCAA
GTTTggaCGA TGCCGCTTAC 151 CAAACAGCAG GCGCAACCGT TGCCGACAAA
GCGGCGGTTT GGGCCTGCCC 201 TTTAATTTAT AAGGTCAACG CGCCGTCCGA
AGGCGAGCTG CCGCTGCTCA 251 AAGAAGGTCA AACCATCGTC AGCTTCCTGT
GGCCGCGCCA AAACGAGGCT 301 TTGGTCGAGG CCTTGCGCGC CAAGAAAGTC
AACGCGCTGG CGATGGACAT 351 GGTTCCCCGC ATTTCCCGCG CTCAGGCCTT
GGACGCTTTG TCTTCAATGG 401 CAAACATCAG CGGCTACCGC GCCGTGATTG
AAGCCGCCAA CGCCTTCGGC 451 CGTTTCTTCA CCGGTCAAAT CACTGCCGCC
GGCAAAGTGC CGCCTGCGCA 501 GGTTTTGGTG ATTGGCGCCG GTGTGGCGGG
TTTGGCGGCA ATCGGTACGG 551 CAAATTCGCT CGGCGCAGTG GTGCGCGCGT
TCGATACCCG CTTGGAAGTG 601 GCGGAACAAA TCGAATCGAT GGGCGGTAAG
TTcctGAAAC TCGACTTCCT 651 GCAAGAATCG GGCGGCAGCG GAGACGgctA
CGCCAAAGTG ATGAGCGACG 701 AATTTATCGC CGCCGAAATG AAGCTCTTTG
CCGAACAGGC GAAAGAAGTG 751 GACATCATCA TCACCACCGC CGCCATTCCG
GGCAAACCCG CTCCCAAGCT 801 GATTACCAAA GAAATGGTGG AAAGCATGAA
ATCCGGATCC GTCATCGTCG 851 ATTTGGCGGC GACGGGCGGC AACTGCGAAC
TCACCCGACC GGGCGAATTG 901 TCCGTAACCG GCAACGGCGT GAAAATCATC
GGCTACACCG ACATGGCAAA 951 CCGCCTTGCC GGACAGTCTT CCCAGCTTTA
CGCCACCAAC TTGGTGAACC 1001 TGACCAAGCT GTTAAGCCCG AACAAAGAcg
gcgaAATCAC GCTGGACTTC 1051 GAAGacgtGA TTATCCGCAA TATGACCGTT
ACCCGcgacg gcgaaATCAC 1101 CTTCCCGCCT CCGccgaTTc aggtTTCcgc
ccggccgCAG CAAAcgccgt 1151 ctgaAAAagc cgcGCCTGCC GCCAagcccg
AgccGaaacc tgttCCcctg 1201 tggaAAAaac tcgCGCCCGC CGCcatcgCC
GCCGTATTGG tgctgtgGgt 1251 cggCgcggtc gcacccgcag CATTCTTGAA
CCACTTTATC GTCTTCGTCC 1301 TCGCCTGCGT CATCGGCTAC CATGTCGTTT
GgaacgTCAG CCACTCGCTG 1351 CACACACCGC TGAtgtcggt aaccaaCgcc
atctccGGCA tcatggtcgt 1401 cggCGCGCTG CTGCAAATCG GTCAGGGcaa
cggcttcgtT TCgctGCTGT 1451 CGTTTGTTGC CATCCTGATT GCCGGCATCA
ATATCTTCGG CGGCTTTGCG 1501 GTTACACGGC GTATGCTGAA TATGTTTAAG
AAAGGGTAA
This corresponds to the amino acid sequence <SEQ ID 638; ORF
155.ng>:
TABLE-US-00851 g155.pep 1 MKIGIPRESL SGETRVACTP ATVALLGKLG
FETVVESGAG LAASLDDAAY 51 QTAGATVADK AAVWACPLIY KVNAPSEGEL
PLLKEGQTIV SFLWPRQNEA 101 LVEALRAKKV NALAMDMVPR ISRAQALDAL
SSMANISGYR AVIEAANAFG 151 RFFTGQITAA GKVPPAQVLV IGAGVAGLAA
IGTANSLGAV VRAFDTRLEV 201 AEQIESMGGK FLKLDFLQES GGSGDGYAKV
MSDEFIAAEM KLFAEQAKEV 251 DIIITTAAIP GKPAPKLITK EMVESMKSGS
VIVDLAATGG NCELTRPGEL 301 SVTGNGVKII GYTDMANRLA GQSSQLYATN
LVNLTKLLSP NKDGEITLDF 351 EDVIIRNMTV TRDGEITFPP PPIQVSARPQ
QTPSEKAAPA AKPEPKPVPL 401 WKKLAPAAIA AVLVLWVGAV APAAFLNHFI
VFVLACVIGY HVVWNVSHSL 451 HTPLMSVTNA ISGIMVVGAL LQIGQGNGFV
SLLSFVAILI AGINIFGGFA 501 VTRRMLNMFK KG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 639>:
TABLE-US-00852 m155.seq 1 ATGAAAATCG GTATCCCACG CGAGTCATTA
TCCGGCGAAA CCCGCGTCGC 51 CTGTACGCCC GCCACCGTCG CCCTGCTGGG
CAAACTGGGC TTTGAAACCG 101 TTGTCGAAAG CGGTGCAGGT TTGGCGGCAA
GTTTGGACGA TGCCGCTTAC 151 CAAACAGCAG GCGCAACCGT TGCCGACAAA
GCGGCGGTTT GGGTCTGCCC 201 TTTGATTTAT AAGGTCAACG CGCCGTCCGA
ACAGGAACTG CCGCTTTTGA 251 ACGAAGGTCA AACCATCGTC AGCTTCCTGT
GGCCGCGCCA AAACGAGGCT 301 TTGGTCGAAG CCTTGCGCGC CAAGAAAGTG
AACGCGCTGG CGATGGATAT 351 GGTGCCCCGC ATTTCGCGCG CGCAGGCTTT
GGACGCTTTG TCTTCGATGG 401 CAAACATCAG CGGCTACCGC GCCGTAATTG
AAGCCGCCAA CGCCTTCGGC 451 CGTTTCTTCA CCGGTCAAAT TACCGCCGCC
GGCAAAGTGC CGCCCGCGCA 501 GGTTTTGGTG ATTGGTGCAG GTGTGGCAGG
TTTGGCGGCG ATCGGTACGG 551 CAAACTCGCT CGGCGCAGTG GTACGCGCGT
TCGATACCCG CTTGGAAGTG 601 GCGGAACAAA TCGAATCGAT GGGCGGCAAG
TTCCTGAAAC TCGACTTCCC 651 ACAAGAATCG GGCGGCAGCG GAGACGGCTA
CGCCAAAGTG ATGAGCGACG 701 AATTTATCGC AGCCGAGATG AAGCTCTTTG
CCGAGCAGGC GAAAGAAGTG 751 GACATCATCA TCACCACCGC CGCCATTCCG
GGCAAACCCG CGCCCAAGCT 801 GATTACCAAA GAAATGGTGG AAAGCATGAA
ATCCGGCTCC GTCATCGTCG 851 ATTTGGCGGC GGCGACGGGC GGCAACTGCG
AACTCACCCG CCCGGGCGAA 901 TTGTCCGTAA CCGGCAACGG CGTGAAAATC
ATCGGCTACA CCGACATGGC 951 AAACCGCCTT GCCGGACAGT CTTCCCAGCT
TTACGCCACC AACTTGGTCA 1001 ACCTGACCAA GCTGTTAAGC CCGAACAAAG
ACGGCGAAAT CACGTTGGAC 1051 TTCGAAGACG TGATTATCCG CAACATGACC
GTTACCCACG ACGGCGAAAT 1101 CACCTTCCCG CCTCCGCCGA TTCAAGTTTC
CGCCCAGCCG CAGCAAACGC 1151 CGTCTGAAAA AGCCGTGCCT GCCGCCAAGC
CCGAGCCAAA ACCCGTTCCC 1201 CTGTGGAAAA AACTCGCGCC CGCCGTCATC
GCCGCCGTCT TGGTACTGTG 1251 GGTCGGCGCG GTCGCACCCG CAGCATTCCT
GAACCACTTT ATCGTGTTCG 1301 TTCTCGCCTG CGTCATCGGC TACTACGTCG
TCTGGAACGT CAGCCACTCG 1351 CTGCACACAC CGCTGATGTC GGTAACCAAC
GCCATCTCCG GCATCATCGT 1401 CGTCGGCGCG CTGCTGCAAA TCGGTCAGGG
CAACGGCTTC GTTTCGCTGC 1451 TGTCGTTTGT TGCCATCCTG ATTGCCGGCA
TCAACATCTT CGGCGGCTTT 1501 GCGGTAACAC GGCGTATGCT GAATATGTTT
AAGAAAGGGT AA
This corresponds to the amino acid sequence <SEQ ID 640; ORF
155>:
TABLE-US-00853 m155.pep 1 MKIGIPRESL SGETRVACTP ATVALLGKLG
FETVVESGAG LAASLDDAAY 51 QTAGATVADK AAVWVCPLIY KVNAPSEQEL
PLLNEGQTIV SFLWPRQNEA 101 LVEALRAKKV NALAMDMVPR ISRAQALDAL
SSMANISGYR AVIEAANAFG 151 RFFTGQITAA GKVPPAQVLV IGAGVAGLAA
IGTANSLGAV VRAFDTRLEV 201 AEQIESMGGK FLKLDFPQES GGSGDGYAKV
MSDEFIAAEM KLFAEQAKEV 251 DIIITTAAIP GKPAPKLITK EMVESMKSGS
VIVDLAAATG GNCELTRPGE 301 LSVTGNGVKI IGYTDMANRL AGQSSQLYAT
NLVNLTKLLS PNKDGEITLD 351 FEDVIIRNMT VTHDGEITFP PPPIQVSAQP
QQTPSEKAVP AAKPEPKPVP 401 LWKKLAPAVI AAVLVLWVGA VAPAAFLNHF
IVFVLACVIG YYVVWNVSHS 451 LHTPLMSVTN AISGIIVVGA LLQIGQGNGF
VSLLSFVAIL IAGINIFGGF 501 AVTRRMLNMF KKG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 155
shows 97.9% identity over a 513 aa overlap with a predicted ORF
(ORF 155.ng) from N. gonorrhoeae:
TABLE-US-00854 m155/g155 97.9% identity in 513 aa overlap 10 20 30
40 50 60 m155.pep
MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAASLDDAAYQTAGATVADK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g155
MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAASLDDAAYQTAGATVADK 10 20
30 40 50 60 70 80 90 100 110 120 m155.pep
AAVWVCPLIYKVNAPSEQELPLLNEGQIIVSFLWPRQNEALVEALRAKKVNALAMDMVPR
||||:|||||||||||| |||||:|||||||||||||||||||||||||||||||||||| g155
AAVWACPLIYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALVEALRAKKVNALAMDMVPR 70 80
90 100 110 120 130 140 150 160 170 180 m155.pep
ISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAAGKVPPAQVLVIGAGVAGLAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g155
ISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAAGKVPPAQVLVIGAGVAGLAA 130
140 150 160 170 180 190 200 210 220 230 240 m155.pep
IGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQESGGSGDGYAKVMSDEFIAAEM
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| g155
IGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFLQESGGSGDGYAKVMSDEFIAAEM 190
200 210 220 230 240 250 260 270 280 290 300 m155.pep
KLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESMKSGSVIVDLAAATGGNCELTRPGE
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| g155
KLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESMKSGSVIVDLAA-TGGNCELTRPGE 250
260 270 280 290 310 320 330 340 350 360 m155.pep
LSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g155
LSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT 300
310 320 330 340 350 370 380 390 400 410 420 m155.pep
VTHDGEITFPPPPIQVSAQPQQTPSEKAVPAAKPEPKPVPLWKKLAPAVIAAVLVLWVGA
||:|||||||||||||||:|||||||||:|||||||||||||||||||:||||||||||| g155
VTRDGEITFPPPPIQVSARPQQTPSEKAAPAAKPEPKPVPLWKKLAPAAIAAVLVLWVGA 360
370 380 390 400 410 430 440 450 460 470 480 m155.pep
VAPAAFLNHFIVFVLACVIGYYVVWNVSHSLHTPLMSVTNAISGIIVVGALLQIGQGNGF
|||||||||||||||||||||:|||||||||||||||||||||||:|||||||||||||| g155
VAPAAFLNHFIVFVLACVIGYHVVWNVSHSLHTPLMSVTNAISGIMVVGALLQIGQGNGF 420
430 440 450 460 470 490 500 510 m155.pep
VSLLSFVAILIAGINIFGGFAVTRRMLNMFKKGX
|||||||||||||||||||||||||||||||||| g155
VSLLSFVAILIAGINIFGGFAVTRRMLNMFKKGX 480 490 500 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 641>:
TABLE-US-00855 a155.seq 1 ATGAAAATCG GTATCCCACG TGAGTCATTA
TCCGGCGAAA CCCGCGTCGC 51 CTGTACGCCC GCCACCGTCG CCCTGCTGGG
CAAACTGGGC TTTGAAACCG 101 TTGTCGAAAG CGGCGCAGGT TTGGCGGCAA
GTTTGGACGA TGCCGCTTAC 151 CAAGCAGCAG GCGCAACCGT TGCCGACAAA
GCAGCGGTTT GGGCATACCC 201 TTTAATTTAT AAGGTTAACG CGCCGTCCGA
AGACGAGCTG CCGCTGCTCA 251 AAGAAGGACA GACCATCGTC AGCTTCCTGT
GGCCGCGCCA AAACGAGGCT 301 TTGGTCGAAG CCTTGCGCGC CAAGAAAGTG
AACGCGCTGG CAATGGACAT 351 GGTGCCCCGC ATTTCGCGCG CGCAGGCTTT
GGACGNTTTG TCTTNGATGG 401 CAAACATCAG CGGCTACCGC GCCGTGATTG
AAGCCGCCAA CGCCTTCGGC 451 CGTTTNTTCA CCGGCCAAAT TACTGCCGCA
GGCAAAGTGC CGCCCGCGCA 501 GGTTTTGGTG ATTGGTGCAG GTGTGGCAGG
TTTGGCGGCG ATCGGTACGG 551 CAAACTCGCT CGGCGCAGTG GTACGCGTGT
TCGATACCCG CCTG.AAGTG 601 GCGGAACAAT TAGAATCGAT GGGCGGCAAG
TTCCTGAAAC TCGACTTCCC 651 GCAAGAATCG GGCGGCAGCG GCGACGGCTA
CGCCAAAGTG ATGAGCGACG 701 AATTTATCGC CGCCGAGATG AAGCTTTTTG
CCGAGCAGGC GAAAGAAGTG 751 GACATCATCA TCACCACCGC CGCCATTCCG
GGCAAACCCG CGCCCAAGCN 801 NNTNANCAAA GAAATGGTCG AAAGCATGAA
ACCCGGCTCC GTCATCGTCG 851 ATTTGGCGGC GGCGACGGGC GGCAACTGCG
AACTCACCAA ACAGGGCGAA 901 TTGTTCGTAA CCGGCAACGG CGTGAAAATC
ATCGGCTACA CCGACATGGC 951 AAACCGCCTT GCCGGACAGT CTTCGCAGCT
TTACGCCACC AACTTGGTCA 1001 ACCTGACCAA GCTGTTAAGC CCGAACAAAG
ACGGCGAAAT CACGCTGGAC 1051 TTCGAAGACG TGATTATCCG CAACATGACC
GTTACCCGCG ACGGCGAAAT 1101 CACCTTCCCG CCTCCGCCGA TTCAAGTTTC
CGCCCAACCG CAGCAAACGC 1151 CGTCTGAAAA AGCCGCGCCT GCCGCCAAGC
CCGAACCGAA ACCCGTTCCC 1201 CTGTGGAAAA AACTCGCGCC CGCCNTNATC
GCCGCCGTGT TGGTACTGTG 1251 GGTCGGCGCG GTCGCACCCG CAGCATTCCT
GAACCACTTT ATCGTCTTCG 1301 TCCTCGCCTG CGTCATCGGC TACTATGTCG
TTTGGAACGT CAGCCACTCG 1351 CTGCACACAC CGCTGATGTC GGTGACCAAC
GCCATTTCCG GCATCATCGT 1401 CGTCGGCGCG CTGCTGCAAA TCGGTCAGGG
CAACGGCTTC GTTTCGCTGC 1451 TGTCGTTTGT TGCCATCCTG ATTGCCAGCA
TCAACATCTT CGGCGGCTTC 1501 TTTGTAACGC GGCGGATGCT GAATATGTTT
AGGAAAGGGT AA
This corresponds to the amino acid sequence <SEQ ID 642; ORF
155.a>:
TABLE-US-00856 a155.pep 1 MKIGIPRESL SGETRVACTP ATVALLGKLG
FETVVESGAG LAASLDDAAY 51 QAAGATVADK AAVWAYPLIY KVNAPSEDEL
PLLKEGQTIV SFLWPRQNEA 101 LVEALRAKKV NALAMDMVPR ISRAQALDXL
SXMANISGYR AVIEAANAFG 151 RXFTGQITAA GKVPPAQVLV IGAGVAGLAA
IGTANSLGAV VRVFDTRLXV 201 AEQLESMGGK FLKLDFPQES GGSGDGYAKV
MSDEFIAAEM KLFAEQAKEV 251 DIIITTAAIP GKPAPKXXXK EMVESMKPGS
VIVDLAAATG GNCELTKQGE 301 LFVTGNGVKI IGYTDMANRL AGQSSQLYAT
NLVNLTKLLS PNKDGEITLD 351 FEDVIIRNMT VTRDGEITFP PPPIQVSAQP
QQTPSEKAAP AAKPEPKPVP 401 LWKKLAPAXI AAVLVLWVGA VAPAAFLNHF
IVFVLACVIG YYVVWNVSHS 451 LHTPLMSVTN AISGIIVVGA LLQIGQGNGF
VSLLSFVAIL IASINIFGGF 501 FVTRRMLNMF RKG* m155/a155 95.3% identity
in 513 aa overlap 10 20 30 40 50 60 m155.pep
MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAASLDDAAYQTAGATVADK
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| a155
MKIGIPRESLSGETRVACTPATVALLGKLGFETWESGAGLAASLDDAAYQAAGATVADK 10 20
30 40 50 60 70 80 90 100 110 120 m155.pep
AAVWVCPLIYKVNAPSEQELPLLNEGQIIVSFLWPRQNEALVEALRAKKVNALAMDMVPR ||||:
|||||||||||:|||||:|||||||||||||||||||||||||||||||||||| a155
AAVWAYPLIYKVNAPSEDELPLLKEGQTIVSFLWPRQNEALVEALRAKKVNALAMDMVPR 70 80
90 100 110 120 130 140 150 160 170 180 m155.pep
ISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAAGKVPPAQVLVIGAGVAGLAA
|||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| a155
ISRAQALDXLSXMANISGYRAVIEAANAFGRXFTGQITAAGKVPPAQVLVIGAGVAGLAA 130
140 150 160 170 180 190 200 210 220 230 240 m155.pep
IGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQESGGSGDGYAKVMSDEFIAAEM
||||||||||||:||||| ||||:|||||||||||||||||||||||||||||||||||| a155
IGTANSLGAVVRVFDTRLXVAEQLESMGGKFLKLDFPQESGGSGDGYAKVMSDEFIAAEM 190
200 210 220 230 240 250 260 270 280 290 300 m155.pep
KLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESMKSGSVIVDLAAATGGNCELTRPGE
|||||||||||||||||||||||||| :|||||||| ||||||||||||||||||: || a155
KLFAEQAKEVDIIITTAAIPGKPAPKXXXKEMVESMKPGSVIVDLAAATGGNCELTKQGE 250
260 270 280 290 300 310 320 330 340 350 360 m155.pep
LSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a155
LFVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNLTKLLSPNKDGEITLDFEDVIIRNMT 310
320 330 340 350 360 370 380 390 400 410 420 m155.pep
VTHDGEITFPPPPIQVSAQPQQTPSEKAVPAAKPEPKPVPLWKKLAPAVIAAVLVLWVGA
||:|||||||||||||||||||||||||:||||||||||||||||||| ||||||||||| a155
VTRDGEITFPPPPIQVSAQPQQTPSEKAAPAAKPEPKPVPLWKKLAPAXIAAVLVLWVGA 370
380 390 400 410 420 430 440 450 460 470 480 m155.pep
VAPAAFLNHFIVFVLACVIGYYVVWNVSHSLHTPLMSVTNAISGIIVVGALLQIGQGNGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a155
VAPAAFLNHFIVFVLACVIGYYVVWNVSHSLHIPLMSVINAISGIIVVGALLQIGQGNGF 430
440 450 460 470 480 490 500 510 m155.pep
VSLLSFVAILIAGINIFGGFAVTRRMLNMFKKGX ||||||||||||: ||||||| |||||||||:
||| a155 VSLLSFVAILIASINIFGGFFVTRRMLNMFRKGX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 643>:
TABLE-US-00857 g156.seq 1 ATGACTTTCG CCTATTGGTG CATTCTGATT
GCCTGCCTAT TGCCGCTTTT 51 TTGTGCGGCG TATGCCAAAA AAGCGGGCGG
ATTCCGGTTT AAAGACAACC 101 ACAATCCTCG CGGTTTTCTG GCACATACGC
AAGGCGCAGC CGCCCGTGCC 151 CACGCCGCGC AGCAAAACGG TTTTGAAGCC
TTTGCACCGT TTGCCGCCGC 201 CGTTTTGACG GCACACGCAA CCGGCAATGC
CGGACAAGCA ACCGTCAACA 251 CGCTTGCCGG ATTGTTCATC CTGTTCCGCC
TCGCCTTTAT CTGGTGCTAC 301 ATCGCAGACA AAGCAGCATT GCGCTCGCTG
ATGTGGGCGG GCGGATTTGC 351 CTGCACCGTC GGACTGTTTG TCGCGGCTGC TTGA
This corresponds to the amino acid sequence <SEQ ID 644; ORF
156.ng>:
TABLE-US-00858 g156.pep 1 MTFAYWCILI ACLLPLFCAA YAKKAGGFRF
KDNHNPRGFL AHTQGAAARA 51 HAAQQNGFEA FAPFAAAVLT AHATGNAGQA
TVNTLAGLFI LFRLAFIWCY 101 IADKAALRSL MWAGGFACTV GLFVAAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 645>:
TABLE-US-00859 m156.seq 1 ATGACTTTCG CCTATTGGTG TATTCTGATT
GCCTGCCTAT TGCCGCTTTT 51 TTGTGCGGCG TATGCCAAAA AAGCGGGCGG
ATTCCGGTTT AAAGACAACC 101 ACAATCCGCG CGGTTTTCTA GCGCACACGC
AAGGCGCAGC CGCCCGTGCC 151 CACGCCGCAC AGCAAAACGG TTTTGAAGCC
TTTGCACCGT TTGCCGCCGC 201 CGTTTTGACG GCACACGCAA CCGGCAATGC
GGCGCAATCG ACCATCAACA 251 CGCTTGCCTG CCTGTTCATC CTGTTCCGCC
TCGCCTTTAT CTGGTGCTAT 301 ATCGCCGACA AAGCCGCTAT GCGCTCACTG
ATGTGGGCAG GCGGATTTGC 351 CTGCACCGTC GGGCTGTTTG TCGCGGCTGC TTGA
This corresponds to the amino acid sequence <SEQ ID 646; ORF
156>:
TABLE-US-00860 m156.pep 1 MTFAYWCILI ACLLPLFCAA YAKKAGGFRF
KDNHNPRGFL AHTQGAAARA 51 HAAQQNGFEA FAPFAAAVLT AHATGNAAQS
TINTLACLFI LFRLAFIWCY 101 IADKAAMRSL MWAGGFACTV GLFVAAA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00861 m156/g156 96.1% identity in 127 aa overlap 10 20 30
40 50 60 m156.pep
MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQGAAARAHAAQQNGFEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g156
MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQGAAARAHAAQQNGFEA 10 20
30 40 50 60 70 80 90 100 110 120 m156.pep
FAPFAAAVLTAHATGNAAQSTINTLACLFILFRLAFIWCYIADKAAMRSLMWAGGFACTV
|||||||||||||||||:|:|:|||| |||||||||||||||||||:||||||||||||| g156
FAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIADKAALRSLMWAGGFACTV 70 80
90 100 110 120 m156.pep GLFVAAAX |||||||| 8156 GLFVAAAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 647>:
TABLE-US-00862 a156.seq 1 ATGACTTTCG CCTATTGGTG TATTCTGATT
GCCTACCTAT TGCCGCTTTT 51 TTGTGCGGCG TATGCCAAAA AAGCGGGCGG
ATTCCGGTTT AAAGACAACC 101 ACAATCCGCG CGATTTTCTG GCGCGCACGC
AAGGCACAGC CGCCCGTGCC 151 CACGCCGCGC AGCAAAACGG TTTTGAAGCC
TTTGCACCGT TTGCAGCCGC 201 CGTTTTGACG GCACACGCAA CCGGCAATGC
CGGACAAGCA ACCGTCAACA 251 CGCTTGCCGG CCTGTTCATC CTGTTCCGCC
TCGCCTTTAT CTGGTGCTAC 301 ATCGCAGACA AAGCAGCATT ACGCTCGCTG
ATGTGGGTGG GCGGATTTGT 351 CTGCACCGTC GGGCTGTTTG TCGTGGCTGC TTGA
This corresponds to the amino acid sequence <SEQ ID 648; ORF
156.a>:
TABLE-US-00863 a156.pep 1 MTFAYWCILI AYLLPLFCAA YAKKAGGFRF
KDNHNPRDFL ARTQGTAARA 51 HAAQQNGFEA FAPFAAAVLT AHATGNAGQA
TVNTLAGLFI LFRLAFIWCY 101 IADKAALRSL MWVGGFVCTV GLFVVAA* m156/a156
90.6% identity in 127 aa overlap 10 20 30 40 50 60 m156.pep
MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQGAAARAHAAQQNGFEA
||||||||||| ||||||||||||||||||||||||| |||:|||:|||||||||||||| a156
MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQGTAARAHAAQQNGFEA 10 20
30 40 50 60 70 80 90 100 110 120 m156.pep
FAPFAAAVLTAHATGNAAQSTINTLACLFILFRLAFIWCYIADKAAMRSLMWAGGFACTV
|||||||||||||||||:|:|:|||| |||||||||||||||||||:|||||:|||:||| a156
FAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIADKAALRSLMWVGGFVCTV 70 80
90 100 110 120 m156.pep GLFVAAAX ||||:||| a156 GLFVVAAX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 649>:
TABLE-US-00864 g157.seq 1 atgaggaacg aggAAAAACg cgccctgcgc
cgcgaattgC gCgGgcggcg 51 ttcgcAAATg GGgcgagacg tGCGggCGGC
GGCGgCgatA Aaaatcaacc 101 gcctgctcaa aCGTtatatc AAGCGCggtc
gGaAaatcgG CGTGTATTgg 151 cCGATGGGCA AGGAATTGcg TTTGGGCGgc
tTtgtcCGCG CGGCGCAAAA 201 ACGCgGCGCA AAactctatc tgccttATAT
CGAACCGCAC ACGCGGCGGA 251 TGTGGTTTAC GCCGTATCCT GAACGCGGAA
TGGAACGGGA ACGCAAGCGC 301 GGTAGGGCGA AGCTGCATGT CCCTCAGTTT
GCAGGGCGCA AAATCCGCGT 351 GCACGGTTTG TCGGTATTGC TCGTCCCGCT
TGTCGGCATA GACCGCGAAG 401 GCTACCGTTT GGGGCAGGCA GGCGGCTATT
ACGATGCGAC GCTTTCGGCG 451 ATGAAATACC GTTTGCAGGC GAAAACCGTG
GGCGTGGGCT TTGCCTGCCA 501 GTTGGTGGAC AGGCTCCCAC GCGAGGCGCA
CGACCTGCCG CTGGACGGTT 551 TTGTATCGGA AGCGGGGATA TTGTGTTTTT AG
This corresponds to the amino acid sequence <SEQ ID 650; ORF
157.ng>:
TABLE-US-00865 g157.pep 1 MRNEEKRALR RELRGRRSQM GRDVRAAAAI
KINRLLKRYI KRGRKIGVYW 51 PMGKELRLGG FVRAAQKRGA KLYLPYIEPH
TRRMWFTPYP ERGMERERKR 101 GRAKLHVPQF AGRKIRVHGL SVLLVPLVGI
DREGYRLGQA GGYYDATLSA 151 MKYRLQAKTV GVGFACQLVD RLPREAHDLP
LDGFVSEAGI LCF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 651>:
TABLE-US-00866 m157.seq 1 ATGAGGAACG AGGAAAAACG CGCCCTGCGC
CGCGAATTGC GCGGGCGGCG 51 TTCGCAAATG GGGCGGGACG TGCGGGCGGC
GGCAACGGTA AAAATCAACC 101 ACCTGCTCAA ACGTTATATT AAAAAAGGGC
GGAAAATCGG CGTGTATTGG 151 CCGATGGGCA AGGAATTGCG TTTGGACGGC
TTTGTCCGCG CGGCGCAAAA 201 ACGCGGTGCG GAACTCTACC TGCCTTATAT
CGAACCGCGT TCGCGGCGGA 251 TGTGGTTTAC GCCGTATCCT GCCGATGGAG
TAAAACAAGA ACGCAAGCGC 301 GGTAGGGCGA AGCTGCATGT CCCTCAGTTT
GCAGGTCGGA AAAAGCGTGT 351 GCATGATTTG AACCTCCTGC TTGTGCCAGT
GGTCGGTATG GACAGGCTGG 401 GCTACCGCTT GGGACAGGCA GGCGGCTATT
ACGATGCGAC GCTTTCAGCG 451 ATGAAATACC GTTTGCAGGC AAAAACCGTG
GGCGTGGGCT TTGCCTGCCA 501 GTTGGTGGAC AGGCTGCCGG TCGAGGCGCA
CGACCGGTCT TTGGACGGTT 551 TTGTGTCGGA GGCGGGGATA TTGTGTTTTT AG
This corresponds to the amino acid sequence <SEQ ID 652; ORF
157>:
TABLE-US-00867 m157.pep 1 MRNEEKRALR RELRGRRSQM GRDVRAAATV
KINHLLKRYI KKGRKIGVYW 51 PMGKELRLDG FVRAAQKRGA ELYLPYIEPR
SRRMWFTPYP ADGVKQERKR 101 GRAKLHVPQF AGRKKRVHDL NLLLVPVVGM
DRLGYRLGQA GGYYDATLSA 151 MKYRLQAKTV GVGFACQLVD RLPVEAHDRS
LDGFVSEAGI LCF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00868 m157/g157 88.1% identity in 193 aa overlap 10 20 30
40 50 60 m157.pep
MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGRKIGVYWPMGKELRLDG
||||||||||||||||||||||||||||: :|||:|||||||:||||||||||||||| | g157
MRNEEKRALRRELRGRRSQMGRDVRAAAAIKINRLLKRYIKRGRKIGVYWPMGKELRLGG 10 20
30 40 50 60 70 80 90 100 110 120 m157.pep
FVRAAQKRGAELYLPYIEPRSRRMWFTPYPADGVKQERKRGRAKLHVPQFAGRKKRVHDL
||||||||||:|||||||||:||||||||| |:::|||||||||||||||||| ||| | g157
FVRAAQKRGAKLYLPYIEPHTRRMWFTPYPERGMERERKRGRAKLHVPQFAGRKIRVHGL 70 80
90 100 110 120 130 140 150 160 170 180 m157.pep
NLLLVPVVGMDRLGYRLGQAGGYYDATLSAMKYRLQAKTVGVGFACQLVDRLPVEAHDRS
::||||:||:|| |||||||||||||||||||||||||||||||||||||||| ||| | g157
SVLLVPLVGIDREGYRLGQAGGYYDATLSAMKYRLQAKTVGVGFACQLVDRLPREAHDLP 130
140 150 160 170 180 190 m157.pep LDGFVSEAGI LCFX ||||||||||||||
g157 LDGFVSEAGI LCFX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 653>:
TABLE-US-00869 a157.seq 1 ATGAGGAACG AGGAAAAACA CGCCTTGCGC
CGAGAGTTGC GCCGCGCCCG 51 CGCGCAGATG GGGCATCAAG GGCGGTTGGC
GGCGGGGCAA ACGATTAACC 101 GCCTGCTCAA ACGTTATATC AAGCGTGGTC
GGAAAATCGG CGTGTATTGG 151 CCGATGGGCA AGGAATTGCG TTTGGACGGC
TTTGTCCGCG CGGCGCAAAA 201 ACGCGGTGCA AAACTTTATC TGCCTTATAT
CGAACCGCGT TCGCGGCGGA 251 TGTGGTTTAC GCCGTATCCT GAAAGCGGAA
TGGAACGGGA GCGCATACGG 301 GGCAGGGCGA AGTTGAACGT GCCGCAGTTT
GCAGGGCGCA AAATCCGCGT 351 GCACGGTTTG TCGGTATTGC TCGTCCCGCT
TGTCGGCATA GACCGCGAGG 401 GCTACCGCTT AGGACAGGCA GGCGGCTATT
ACGATGCGAC GCTTGCGGCG 451 ATGAAATACC GTTTGCAGGC AAAAACCGTG
GGCGTGGGCT TTGCCTGCCA 501 GTTTGTGGAC AGGCTGCCGC GCGAACCGCA
CGATCTGCTG CTGGACGGTT 551 TTGTGTCGGA GGCGGGGATA TTGTGCTTTT AG
This corresponds to the amino acid sequence <SEQ ID 654; ORF
157.a>:
TABLE-US-00870 a157.pep 1 MRNEEKHALR RELRRARAQM GHQGRLAAGQ
TINRLLKRYI KRGRKIGVYW 51 PMGKELRLDG FVRAAQKRGA KLYLPYIEPR
SRRMWFTPYP ESGMERERIR 101 GRAKLNVPQF AGRKIRVHGL SVLLVPLVGI
DREGYRLGQA GGYYDATLAA 151 MKYRLQAKTV GVGFACQFVD RLPREPHDLL
LDGFVSEAGI LCF* m157/a157 82.4% identity in 193 aa overlap 10 20 30
40 50 60 m157.pep
MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGRKIGVYWPMGKELRLDG
||||||:||||||| |:|||::| || ||:|||||||:|||||||||||||||||| a157
MRNEEKHALRRELRRARAQMGHQGRLAAGQTINRLLKRYIKRGRKIGVYWPMGKELRLDG 10 20
30 40 50 60 70 80 90 100 110 120 m157.pep
FVRAAQKRGAELYLPYIEPRSRRMWFTPYPADGVKQERKRGRAKLHVPQFAGRKKRVHDL
||||||||||:||||||||||||||||||| :|:::|| ||||||:|||||||| ||| | a157
FVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGRAKLNVPQFAGRKIRVHGL 70 80
90 100 110 120 130 140 150 160 170 180 m157.pep
NLLLVPVVGMDRLGYRLGQAGGYYDATLSAMKYRLQAKTVGVGFACQLVDRLPVEAHDRS
::||||:||:|| |||||||||||||||:||||||||||||||||||:||||| | || a157
SVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTVGVGFACQFVDRLPREPHDLL 130
140 150 160 170 180 190 m157.pep LDGFVSEAGI LCFX ||||||||||||||
a157 LDGFVSEAGI LCFX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 655>:
TABLE-US-00871 g158.seq 1 ATGAAAACCA ATTCAGAAGA ACTGACCGTA
TTTGTTCAAG TGGTGGAAAG 51 CGGCAGCTTC AGCCGTGCGG CGgagcAGTT
GGAGAtggCA AATTCTGCCG 101 TAAGCCGCAT CGTCAAACGG CTGGAGGAAA
AGTTGGGCGT GAAcCTGCtc 151 aACCGCACCA CGCGGCAACT CAATCTGACG
GAAGAAGGCG CGCAATATTT 201 CCGCCGCGCG CAGAGAATCC TGCAAGAAAT
GGCAGCGGCG GAAACCGAAA 251 TGCTGGCAGT GCACGAAGTA CCGCAAGGCG
TGTTGCGCGT GGATTCCGCG 301 ATGCcgatgg TGCTGCATCT GCTGGCGCCG
CTGGCAGCAA AATTCAACGA 351 ACGCTATCCG CATATCcgaC TTTCGCTCGT
TTCTTCCGAa ggctatatca 401 atctGattGA Acgcaaagtc gAtatTGCCT
TACGGGCCGG AGAATTGGAC 451 GATTCCGGGC TGCGTGCACG CCATCTGTTT
GACAGCCACT TCCGCGtagt 501 cgCCAGTCCT GAATATTTAG CAAAACACGG
CACGCCACAA TCTGCAGAAG 551 atcTTGCCAA CCATCAATGT TTAGGCTTCA
CAGAACCCGG TTCTCTAAAT 601 ACATGGGCGG TTTTAGAtgC GCAGGGAAAT
CCCTATAAAA TTTCACCGCA 651 CTTTACCGCC AGCAGCGGTG AAATCTTACG
CTCGTTGTGC CTTTCAAGtt 701 gCGGTATTGC TTGCTTATCA GATTTTTTGG
TTGACAACGA CATCACTGAA 751 GGAAAGTTAA TTCCcctatt cgCCGAACAA
ACCTCCAATA AAACACACCC 801 CTTTAATGCT GTTTATTACA GCGATAAAGC
CGTCAACCTC CGCTTACGCG 851 TATTTTTGGA TTTTTTAGTG AAGGAACTGG
GAAAAAATAT GAATAGAACG 901 AATACCAAAT AA
This corresponds to the amino acid sequence <SEQ ID 656; ORF
158.ng>:
TABLE-US-00872 g158.pep 1 MKTNSEELTV FVQVVESGSF SRAAEQLEMA
NSAVSRIVKR LEEKLGVNLL 51 NRTTRQLNLT EEGAQYFRRA QRILQEMAAA
ETEMLAVHEV PQGVLRVDSA 101 MPMVLHLLAP LAAKFNERYP HIRLSLVSSE
GYINLIERKV DIALRAGELD 151 DSGLRARHLF DSHFRVVASP EYLAKHGTPQ
SAEDLANHQC LGFTEPGSLN 201 TWAVLDAQGN PYKISPHFTA SSGEILRSLC
LSSCGIACLS DFLVDNDITE 251 GKLIPLFAEQ TSNKTHPFNA VYYSDKAVNL
RLRVFLDFLV KELGKNMNRT 301 NTK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 657>:
TABLE-US-00873 m158.seq 1 ATGAAAACCA ATTCAGAAGA ACTGACCGTA
TTTGTTCAAG TGGTGGAAAG 51 CGGCAGCTTC AGCCGTGCGG CGGAGCAGTT
GGCGATGGCA AATTCTGCCG 101 TAAGCCGCAT CGTCAAACGG CTGGAGGAAA
AGTTGGGTGT GAACCTGCTC 151 AACCGCACCA CGCGGCAACT CAGTCTGACG
GAAGAAGGCG CGCAATATTT 201 CCGCCGCGCG CAGAGAATCC TGCAAGAAAT
GGCAGCGGCG GAAACCGAAA 251 TGCTGGCAGT GCACGAAATA CCGCAAGGCG
TGTTGAGCGT GGATTCCGCG 301 ATGCCGATGG TGCTGCATCT GCTGGCGCCG
CTGGCAGCAA AATTCAACGA 351 ACGCTATCCG CATATCCGAC TTTCGCTCGT
TTCTTCCGAA GGCTATATCA 401 ATCTGATTGA ACGCAAAGTC GATATTGCCT
TACGGGCCGG AGAATTGGAC 451 GATTCCGGGC TGCGTGCACG CCATCTGTTT
GACAGCCGCT TCCGCGTAAT 501 CGCCAGTCCT GAATACCTGG CAAAACACGG
CACGCCGCAA TCTACAGAAG 551 AGCTTGCCGG CCACCAATGT TTAGGCTTCA
CCGAACCCGG TTCTCTAAAT 601 ACATGGGCGG TTTTAGATGC GCAGGGAAAT
CCCTATAAGA TTTCACCGCA 651 CTTTACCGCC AGCAGCGGTG AAATCTTACG
CTCGTTGTGC CTTTCAGGTT 701 GCGGTATTGT TTGCTTATCA GATTTTTTGG
TTGACAACGA CATCGCTGAA 751 GGAAAGTTAA TTCCCCTGCT CGCCGAACAA
ACCTCCGATA AAACACACCC 801 CTTTAATGCT GTTTATTACA GCGATAAAGC
CGTCAATCTC CGCTTACGCG 851 TATTTTTGGA TTTTTTAGTG GAGGAACTGG
GAAACAATCT CTGTGGATAA
This corresponds to the amino acid sequence <SEQ ID 658; ORF
158>:
TABLE-US-00874 m158.pep 1 MKTNSEELTV FVQVVESGSF SRAAEQLAMA
NSAVSRIVKR LEEKLGVNLL 51 NRTTRQLSLT EEGAQYFRRA QRILQEMAAA
ETEMLAVHEI PQGVLSVDSA 101 MPMVLHLLAP LAAKFNERYP HIRLSLVSSE
GYINLIERKV DIALRAGELD 151 DSGLRARHLF DSRFRVIASP EYLAKHGTPQ
STEELAGHQC LGFTEPGSLN 201 TWAVLDAQGN PYKISPHFTA SSGEILRSLC
LSGCGIVCLS DFLVDNDIAE 251 GKLIPLLAEQ TSDKTHPFNA VYYSDKAVNL
RLRVFLDFLV EELGNNLCG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00875 m158/g158 94.3% identity in 297 aa overlap 10 20 30
40 50 60 m158.pep
MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLT
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||:|| g158
MKTNSEELTVFVQVVESGSFSRAAEQLEMANSAVSRIVKRLEEKLGVNLLNRTTRQLNLT 10 20
30 40 50 60 70 80 90 100 110 120 m158.pep
EEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYP
|||||||||||||||||||||||||||||:||||| |||||||||||||||||||||||| g158
EEGAQYFRRAQRILQEMAAAETEMLAVHEVPQGVLRVDSAMPMVLHLLAPLAAKFNERYP 70 80
90 100 110 120 130 140 150 160 170 180 m158.pep
HIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQ
||||||||||||||||||||||||||||||||||||||||||:|||:||||||||||||| g158
HIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSHFRVVASPEYLAKHGTPQ 130
140 150 160 170 180 190 200 210 220 230 240 m158.pep
STEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLS
|:|:||:|||||||||||||||||||||||||||||||||||||||||||||:|||:||| g158
SAEDLANHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSSCGIACLS 190
200 210 220 230 240 250 260 270 280 290 300 m158.pep
DFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNLCGX
||||||||:|||||||:|||||:|||||||||||||||||||||||||||:|||:|: g158
DFLVDNDITEGKLIPLFAEQTSNKTHPFNAVYYSDKAVNLRLRVFLDFLVKELGKNMNRT 250
260 270 280 290 300 g158 NTKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 659>:
TABLE-US-00876 a158.seq 1 ATGAAAACCA ATTCAGAAGA ACTGACCGTA
TTTGTTCAAG TGGTGGAAAG 51 CGGCAGCTTC AGCCGTGCGG CGGAGCAGTT
GGCGATGGCA AATTCTGCCG 101 TAAGCCGCAT CGTCAAACGG CTGGAGGAAA
AGTTGGGTGT GAACCTGCTC 151 AACCGCACCA CGCGGCAACT CAGTCTGACG
GAAGAAGGCG CGCAATATTT 201 CCGCCGCGCG CAGAGAATCC TGCAAGAAAT
GGCAGCGGCG GAAACCGAAA 251 TGCTGGCAGT GCACGAAATA CCGCAAGGCG
TGTTGCGCGT GGATTCCGCG 301 ATGCCGATGG TGCTGCATCT GCTGGCGCCG
CTGGCAGCAA AATTCAACGA 351 ACGCTATCCG CATATCCGAC TTTCGCTCGT
TTCTTCCGAA GGCTATATCA 401 ATCTGATTGA ACGCAAAGTC GATATTGCCT
TACGGGCCGG AGAATTGGAC 451 GATTCCGGGC TGCGTGCACG CCATCTGTTT
GACAGCCGCT TCCGCGTAAT 501 CGCCAGTCCT GAATACCTGG CAAAACACGG
CACGCCGCAA TCTACAGAAG 551 AGCTTGCCGG CCACCAATGT TTAGGCTTCA
CCGAACCCGG TTCTCTAAAT 601 ACATGGGCGG TTTTAGATGC GCAGGGAAAT
CCCTATAAGA TTTCACCGCA 651 CTTTACCGCC AGCAGCGGTG AAATCTTACG
CTCGTTGTGC CTTTCAGGTT 701 GCGGTATTGC TTGCTTATCA GATTTTTTGG
TTGACAACGA CATCGCTGAA 751 GGAAAGTTAA TTCCCCTGCT CGCCGAACAA
ACCTCCAATA AAACGCACCC 801 CTTTAATGCT GTTTATTACA GCGATAAAGC
CGTCAACCTC CGCTTACGCG 851 TATTTTTGGA TTTTTTAGTG GAGGAACTGG
GAAACAATCT CTGTGGATAA
This corresponds to the amino acid sequence <SEQ ID 660; ORF
158.a>:
TABLE-US-00877 a158.pep 1 MKTNSEELTV FVQVVESGSF SRAAEQLAMA
NSAVSRIVKR LEEKLGVNLL 51 NRTTRQLSLT EEGAQYFRRA QRILQEMAAA
ETEMLAVHEI PQGVLRVDSA 101 MPMVLHLLAP LAAKFNERYP HIRLSLVSSE
GYINLIERKV DIALRAGELD 151 DSGLRARHLF DSRFRVIASP EYLAKHGTPQ
STEELAGHQC LGFTEPGSLN 201 TWAVLDAQGN PYKISPHFTA SSGEILRSLC
LSGCGIACLS DFLVDNDIAE 251 GKLIPLLAEQ TSNKTHPFNA VYYSDKAVNL
RLRVFLDFLV EELGNNLCG* m158/a158 99.0% identity in 299 aa overlap 10
20 30 40 50 60 m158.pep
MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a158
MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLT 10 20
30 40 50 60 70 80 90 100 110 120 m158.pep
EEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYP
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| a158
EEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMPMVLHLLAPLAAKFNERYP 70 80
90 100 110 120 130 140 150 160 170 180 m158.pep
HIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a158
HIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQ 130
140 150 160 170 180 190 200 210 220 230 240 m158.pep
STEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLS
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| a158
STEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIACLS 190
200 210 220 230 240 250 260 270 280 290 300 m158.pep
DFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNLCGX
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| a158
DFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNLCGX 250
260 270 280 290 300
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 661>:
TABLE-US-00878 g160.seq 1 ATGGAcattc tgGACAAact ggtcgatCTC
GCccaATTGA CGGGCAGTGC 51 GGATGTGCAG TgcctTTTGG GCGGACAATG
gcATGaaacc TTGCAACGCG 101 AAGGGCTGGT ACACATTGTT ACGGCGGGCA
GCGGTTATCT CTGCATCGAC 151 GGCGAAACTT CCCCGCGTCC GGTCGGCACG
GGCGATATTG TATTTTTCCC 201 GCGCGGCTTG GGTCATGTGT TGAGCCACGA
CGGAAAATAC GGAGAAAGTT 251 TACAACCGGA CATACGACAA AACGGCACAT
TTATGGTCAA ACAGTGCGGC 301 AACGGGCTGG ATATGAGCCT GTTTTGCGCC
CGTTTCCGCT ACGACACCCA 351 CGCCGATTTG ATGAACGGGC TGCCGGAAAC
CGTTTTTCTG AACATTGCCC 401 ATCCAAGTTT GCAGTATGTG GTTTCAATGC
TGCAACTGGA AAGCGAAAAA 451 CCTTTGACGG GGACGGTTTC CGTGGTCAAC
GCATTACCGT CCGTCCTGCT 501 GGTGCTTATC CTGCGCGCCT ATCTCGAACA
GGATAAGGAT GTCGAACTCT 551 CGGGCGTATT GAAAGGTTGG CAGGACAAAC
GTTTGGGACA TTTGATCCAA 601 AAGGTGATAG ACAAACCGGA AGACGAATGG
AATATTGACA AAATGGTTGC 651 CGCCGCCAAT ATGTCGCGCG CGCAACTGAT
GCGCCGCTTC AAAAGCCAAG 701 TCGGACTCAG CCCGCACGCC TTTGTGAACC
ATATCCGCCT GCAAAAAGGC 751 GCATTGCTGC TGAAGAAAAC CCCGGATTCG
GTTTTGGAGG TCGCGCTGTC 801 GGTGGGCTTT CAGTCGGAAA CGCATTTCGG
CAAGGCGTTC AAACGGCAAT 851 ATCACGTTTC GCCGGGGCAA TACCGGAAAG
AAGGCGGGCA AAAATAA
This corresponds to the amino acid sequence <SEQ ID 662; ORF
160.ng>:
TABLE-US-00879 g160.pep 1 MDILDKLVDL AQLTGSADVQ CLLGGQWHET
LQREGLVHIV TAGSGYLCID 51 GETSPRPVGT GDIVFFPRGL GHVLSHDGKY
GESLQPDIRQ NGTFMVKQCG 101 NGLDMSLFCA RFRYDTHADL MNGLPETVFL
NIAHPSLQYV VSMLQLESEK 151 PLTGTVSVVN ALPSVLLVLI LRAYLEQDKD
VELSGVLKGW QDKRLGHLIQ 201 KVIDKPEDEW NIDKMVAAAN MSRAQLMRRF
KSQVGLSPHA FVNHIRLQKG 251 ALLLKKTPDS VLEVALSVGF QSETHFGKAF
KRQYHVSPGQ YRKEGGQK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 663>:
TABLE-US-00880 m160.seq 1 ATGGACATTC TGGACAAACT GGTCGATTTC
GCCCAATTGA CGGGCAGTGT 51 GGATGTGCAG TGCCTTTTGG GCGGACAATG
GTCGGTACGG CATGAAACCT 101 TGCAACGCGA AGGATTGGTA CACATTGTTA
CATCGGGCAG CGGCTATCTC 151 TGCATCGACG GCGAAACTTC CCCGCGTCCG
GTCAGTACAG GGGATATTGT 201 ATTTTTCCCG CGCGGCTTGG GTCATGTGTT
GAGCCACGAC GGAAAATGCG 251 GAGAAAGTTT ACAACCGGAT ATGCGGCAGC
ACGGTGCGTT TACGGTCAAG 301 CAGTGCGGCA ACGGACAGGA TATGAGCCTG
TTTTGCGCCC GTTTCCGCTA 351 CGACACCCAC GCCGATTTGA TGAACGGGCT
GCCTGAAACC GTTTTTCTGA 401 ACATTGCCCA TCCGAGTTTA CAGTATGTGG
TTTCAATGCT GCAACTGGAA 451 AGCAAAAAAC CTTTGACGGG GACGGTTTCC
ATGGTCAACG CATTGTCGTC 501 CGTCCTGCTG GTGCTTATCC TGCGCGCCTA
TCTCGAACAG GATAAGGATG 551 TCGAACTCTC GGGCGTATTG AAAGGTTGGC
AGGACAAACG TTTGGGACAT 601 TTAATCCAAA AGGTGATAGA CAAACCGGAA
GACGAATGGA ATGTCGACAA 651 AATGGTGGCG GCTGCCAATA TGTCGCGCGC
GCAACTGATG CGCCGTTTCA 701 AAAGCCGGGT CGGACTCAGC CCGCACGCCT
TTGTGAACCA TATCCGCCTG 751 CAAAAAGGCG CGTTGCTGCT GAAAAAAAAC
CCGGATTCGG TTTTGTCGGT 801 CGCACTGTCG GTAGGCTTTC AGTCGGAAAC
GCACTTCGGC AAGGCGTTCA 851 AACGGCAATA TCACGTTTCG CCGGGTCAAT
ACCGGAAAGA AggCGGGCAA 901 AAATAA
This corresponds to the amino acid sequence <SEQ ID 664; ORF
160>:
TABLE-US-00881 m160.pep 1 MDILDKLVDF AQLTGSVDVQ CLLGGQWSVR
HETLQREGLV HIVTSGSGYL 51 CIDGETSPRP VSTGDIVFFP RGLGHVLSHD
GKCGESLQPD MRQHGAFTVK 101 QCGNGQDMSL FCARFRYDTH ADLMNGLPET
VFLNIAHPSL QYVVSMLQLE 151 SKKPLTGTVS MVNALSSVLL VLILRAYLEQ
DKDVELSGVL KGWQDKRLGH 201 LIQKVIDKPE DEWNVDKMVA AANMSRAQLM
RRFKSRVGLS PHAFVNHIRL 251 QKGALLLKKN PDSVLSVALS VGFQSETHFG
KAFKRQYHVS PGQYRKEGGQ 301 K*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00882 m160/g160 93.4% identity in 301 aa overlap 10 20 30
40 50 60 m160.pep
MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGSGYLCIDGETSPRP
|||||||||:||||||:|||||||||| ||||||||||||||:||||||||||||||| g160
MDILDKLVDLAQLTGSADVQCLLGGQW---HETLQREGLVHIVTAGSGYLCIDGETSPRP 10 20
30 40 50 70 80 90 100 110 120 m160.pep
VSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTH
|:|||||||||||||||||||| |||||||:||:|:| ||||||| |||||||||||||| g160
VGTGDIVFFPRGLGHVLSHDGKYGESLQPDIRQNGTFMVKQCGNGLDMSLFCARFRYDTH 60 70
80 90 100 110 130 140 150 160 170 180 m160.pep
ADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVSMVNALSSVLLVLILRAYLEQ
|||||||||||||||||||||||||||||||:||||||||:|||| |||||||||||||| g160
ADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLTGTVSVVNALPSVLLVLILRAYLEQ 120
130 140 150 160 170 190 200 210 220 230 240 m160.pep
DKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKMVAAANMSRAQLMRRFKSRVGLS
||||||||||||||||||||||||||||||||||:||||||||||||||||||||:|||| g160
DKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNIDKMVAAANMSRAQLMRRFKSQVGLS 180
190 200 210 220 230 250 260 270 280 290 300 m160.pep
PHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQ
|||||||||||||||||||:||||| |||||||||||||||||||||||||||||||||| g160
PHAFVNHIRLQKGALLLKKTPDSVLEVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQ 240
250 260 270 280 290 m160.pep KX || g160 KX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 665>:
TABLE-US-00883 a160.seq 1 ATGGACATTC TGGACAAACT GGTCGATTTC
GCCCAATTGA CGGGCAGTGT 51 GGATGTGCAG TGCCTTTTGG GCGGACAATG
GTCGGTACGG CATGAAACCT 101 TGCAACGCGA AGGATTGGTA CACATTGTTA
CATCGGGCAG CGGCTATCTC 151 TGCATCGACG GCGAAACTTC CCCGCGTCCG
GTCAGTACAG GGGATATTGT 201 ATTTTTCCCG CGCGGCTTGG GTCATGTGTT
GAGCCACGAC GGAAAATGCG 251 GAGAAAGTTT ACAACCGGAT ATGCGGCAGC
ACGGTGCGTT TACGGTCAAG 301 CAGTGCGGCA ACGGACAGGA TATGAGCCTG
TTTTGCGCCC GTTTCCGCTA 351 CGACACCCAC GCCGATTTGA TGAACGGGCT
GCCTGAAACC GTTTTTCTGA 401 ACATTGCCCA TCCGAGTTTA CAGTATGTGG
TTTCAATGCT GCAACTGGAA 451 AGCAAAAAAC CTTTGACGGG GACGGTTTCC
ATGGTCAACG CATTGTCGTC 501 CGTCCTGCTG GTGCTTATCC TGCGCGCCTA
TCTCGAACAG GATAAGGATG 551 TCGAACTCTC GGGCGTATTG AAAGGTTGGC
AGGACAAACG TTTGGGACAT 601 TTAATCCAAA AGGTGATAGA CAAACCGGAA
GACGAATGGA ATGTCGACAA 651 AATGGTGGCG GCTGCCAATA TGTCGCGCGC
GCAACTGATG CGCCGTTTCA 701 AAAGCCGGGT CGGACTCAGC CCGCACGCCT
TTGTGAACCA TATCCGCCTG 751 CAAAAAGGCG CGTTGCTGCT GAAAAAAAAC
CCGGATTCGG TTTTGTCGGT 801 CGCACTGTCG GTAGGCTTTC AGTCGGAAAC
GCACTTCGGC AAGGCGTTCA 851 AACGGCAATA TCACGTTTCG CCGGGTCAAT
ACCGGAAAGA AGGCGGGCAA 901 AAATAA
This corresponds to the amino acid sequence <SEQ ID 666; ORF
160.a>:
TABLE-US-00884 a160.pep 1 MDILDKLVDF AQLTGSVDVQ CLLGGQWSVR
HETLQREGLV HIVTSGSGYL 51 CIDGETSPRP VSTGDIVFFP RGLGHVLSHD
GKCGESLQPD MRQHGAFTVK 101 QCGNGQDMSL FCARFRYDTH ADLMNGLPET
VFLNIAHPSL QYVVSMLQLE 151 SKKPLTGTVS MVNALSSVLL VLILRAYLEQ
DKDVELSGVL KGWQDKRLGH 201 LIQKVIDKPE DEWNVDKMVA AANMSRAQLM
RRFKSRVGLS PHAFVNHIRL 251 QKGALLLKKN PDSVLSVALS VGFQSETHFG
KAFKRQYHVS PGQYRKEGGQ 301 K* m160/a160 100.0% identity in 301 aa
overlap 10 20 30 40 50 60 m160.pep
MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGSGYLCIDGETSPRP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a160
MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGSGYLCIDGETSPRP 10 20
30 40 50 60 70 80 90 100 110 120 m160.pep
VSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a160
VSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTH 70 80
90 100 110 120 130 140 150 160 170 180 m160.pep
ADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVSMVNALSSVLLVLILRAYLEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a160
ADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVSMVNALSSVLLVLILRAYLEQ 130
140 150 160 170 180 190 200 210 220 230 240 m160.pep
DKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKMVAAANMSRAQLMRRFKSRVGLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a160
DKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKMVAAANMSRAQLMRRFKSRVGLS 190
200 210 220 230 240 250 260 270 280 290 300 m160.pep
PHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a160
PHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQ 250
260 270 280 290 300 m160.pep KX || a160 KX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 667>:
TABLE-US-00885 g161.seq 1 ATGGATACCG CAAAAAAAGA CATTTTAGGA
TCGGGCTGGA TGCTGGTGGC 51 GGCGGCCTGC TTCACCGTTA TGAACGTATT
GATTAAAGAG GCATCGGCAA 101 AATTTGCCCT CGGCAGCGGC GAATTGGTCT
TTTGGCGCAT GCTGTTTTCA 151 ACCGTTACGC TCGGTGCTGC CGCCGTATTG
CGGCGCGACA CCTTCCGCAC 201 GCCCCATTGG AAAAACCACT TAAACCGCAG
TATGGTCGGG ACGGGGGCGA 251 TGCTGCTGCT GTTTTACGCG GTAACGCATC
TGCCTTTGAC AACCGGCGTT 301 ACCCTGAGTT ACACCTCGTC GATTTTTttg
GCGGTATTTT CCTTCCTGAT 351 TTTGAAAGAA CGGATTTCCG TTTACACGCA
GGCGGTGCTG CTCCTTGGTT 401 TTGCCGGCGT GGTATTGCTG CTTAATCCCT
CGTTCCGCAG CGGTCAGGAA 451 CCGGCGGCAC TCGCCGGGCT GGCGGGCGGC
GCGATGTCCG GCTGGGCGTA 501 TTTGAAAGTG CGCGAACTGT CTTTGGCGGG
CGAACCCGGC TGGCGCGTCG 551 TGTTTTACCT TTCCGCAACC GGCGTGGCGA
TGTCGTCggt ttgggcgacg 601 Ctgaccggct ggCACAcccT GTCCTTTcca
tcggcagttt ATCtgtCGGG 651 CATCGGCGTG tccgcgCtgA TTGCCCAaCT
GtcgatgAcg cGCGcctaca 701 aaGTCGGCGA CAAATTCACG GTTGCCTCGC
tttcctaTAt gaccgtcGTC 751 TTTTCCGCCC TGTCTGCCGC ATTTTTTCTg
ggcgaagagc ttttctggCA 801 GGAAATACTC GGTATGTGCA TCATTATcct
CAGCGGCATT TTGAGCAGCA 851 TCCGCCCCAT TGCCTTCAAA CAGCGGCTGC
AAGCCCTCTT CCGCCAAAGA 901 TAA
This corresponds to the amino acid sequence <SEQ ID 668; ORF
161.ng>:
TABLE-US-00886 g161.pep 1 MDTAKKDILG SGWMLVAAAC FTVMNVLIKE
ASAKFALGSG ELVFWRMLFS 51 TVTLGAAAVL RRDTFRTPHW KNHLNRSMVG
TGAMLLLFYA VTHLPLTTGV 101 TLSYTSSIFL AVFSFLILKE RISVYTQAVL
LLGFAGVVLL LNPSFRSGQE 151 PAALAGLAGG AMSGWAYLKV RELSLAGEPG
WRVVFYLSAT GVAMSSVWAT 201 LTGWHTLSFP SAVYLSGIGV SALIAQLSMT
RAYKVGDKFT VASLSYMTVV 251 FSALSAAFFL GEELFWQEIL GMCIIILSGI
LSSIRPIAFK QRLQALFRQR 301 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 669>:
TABLE-US-00887 m161.seq 1 ATGGATACCG CAAAAAAAGA CATTTTAGGA
TCGGGCTGGA TGCTGGTGGC 51 GGCGGCCTGC TTTACCATTA TGAACGTATT
GATTAAAGAG GCATCGGCAA 101 AATTTGCCCT CGGCAGCGGC GAATTGGTCT
TTTGGCGCAT GCTGTTTTCA 151 ACCGTTGCGC TCGGGGCTGC CGCCGTATTG
CGTCGGGACA mCTTCCGCAC 201 GCCCCATTGG AAAAACCACT TAAACCGCAG
TATGGTCGGG ACGGGGGCGA 251 TGCTGCTGCT GTTTTACGCG GTAACGCATC
TGCCTTTGGC CACTGGCGTT 301 ACCCTGAGTT ACACCTCGTC GATTTTTTTG
GCGGTATTTT CCTTCCTGAT 351 TTTGAAAGAA CGGATTTCCG TTTACACGCA
GGCGGTGCTG CTCCTTGGTT 401 TTGCCGGCGT GGTATTGCTG CTTAATCCCT
CGTTCCGCAG CGGTCAGGAA 451 ACGGCGGCAC TCGCCGGGCT GGCGGGCGGC
GCGATGTCCG GCTGGGCGTA 501 TTTGAAAGTG CGCGAACTGT CTTTGGCGGG
CGAACCCGGC TGGCGCGTCG 551 TGTTTTACCT TTCCGTGACA GGTGTGGCGA
TGTCGTCGGT TTGGGCGACG 601 CTGACCGGCT GGCACACCCT GTCCTTTCCA
TCGGCAGTTT ATCTGTCGTG 651 CATCGGCGTG TCCGCGCTGA TTGCCCAACT
GTCGATGACG CGCGCCTACA 701 AAGTCGGCGA CAAATTCACG GTTGCCTCGC
TTTCCTATAT GACCGTCGTT 751 TTTTCCGCTC TGTCTGCCGC ATTTTTTCTG
GGCGAAGAGC TTTTCTGGCA 801 GGAAATACTC GGTATGTGCA TCATCATCCT
CAGCGGTATT TTGAGCAGCA 851 TCCGCCCCAC TGCCTTCAAA CAGCGGCTGC
AATCCCTGTT CCGCCAAAGA 901 TAA
This corresponds to the amino acid sequence <SEQ ID 670; ORF
161>:
TABLE-US-00888 m161.pep 1 MDTAKKDILG SGWMLVAAAC FTIMNVLIKE
ASAKFALGSG ELVFWRMLFS 51 TVALGAAAVL RRDXFRTPHW KNHLNRSMVG
TGAMLLLFYA VTHLPLATGV 101 TLSYTSSIFL AVFSFLILKE RISVYTQAVL
LLGFAGVVLL LNPSFRSGQE 151 TAALAGLAGG AMSGWAYLKV RELSLAGEPG
WRVVFYLSVT GVAMSSVWAT 201 LTGWHTLSFP SAVYLSCIGV SALIAQLSMT
RAYKVGDKFT VASLSYMTVV 251 FSALSAAFFL GEELFWQEIL GMCIIILSGI
LSSIRPTAFK QRLQSLFRQR 301 *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00889 m161/g161 97.0% identity in 300 aa overlap 10 20 30
40 50 60 m161.pep
MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVL
||||||||||||||||||||||:|||||||||||||||||||||||||||||:||||||| g161
MDTAKKDILGSGWMLVAAACFTVMNVLIKEASAKFALGSGELVFWRMLFSTVTLGAAAVL 10 20
30 40 50 60 70 80 90 100 110 120 m161.pep
RRDXFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKE
|||:||||||||||||||||||||||||||||||||:||||||||||||||||||||||| g161
RRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLTTGVTLSYTSSIFLAVFSFLILKE 70 80
90 100 110 120 130 140 150 160 170 180 m161.pep
RISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPG
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| g161
RISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGGAMSGWAYLKVRELSLAGEPG 130
140 150 160 170 180 190 200 210 220 230 240 m161.pep
WRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFT
||||||||:||||||||||||||||||||||||||| ||||||||||||||||||||||| g161
WRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGIGVSALIAQLSMTRAYKVGDKFT 190
200 210 220 230 240 250 260 270 280 290 300 m161.pep
VASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQRLQSLFRQR
|||||||||||||||||||||||||||||||||||||||||||||| |||||||:||||| g161
VASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPIAFKQRLQALFRQR 250
260 270 280 290 300 m161.pep X | g161 X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 671>:
TABLE-US-00890 a161.seq 1 ATGGATACCG CAAAAAAAGA CATTTTAGGA
TCGGGCTGGA TGCTGGTGGC 51 GGCGGCCTGC TTTACCATTA TGAACGTATT
GATTAAAGAG GCATCGGCAA 101 AATTTGCCCT CGGCAGCGGC GAATTGGTCT
TTTGGCGCAT GCTGTTTTCA 151 ACCGTTGCGC TCGGGGCTGC CGCCGTATTG
CGTCGGGACA CCTTCCGCAC 201 GCCCCATTGG AAAAACCACT TAAACCGCAG
TATGGTCGGG ACGGGGGCGA 251 TGCTGCTGCT GTTTTACGCG GTAACGCATC
TGCCTTTGGC CACCGGCGTT 301 ACCCTGAGTT ACACCTCGTC GATTTTTTTG
GCGGTATTTT CCTTCCTGAT 351 TTTGAAAGAA CGGATTTCCG TTTACACGCA
GGCGGTGCTG CTCCTTGGTT 401 TTGCCGGCGT GGTATTGCTG CTTAATCCCT
CGTTCCGCAG CGGTCAGGAA 451 ACGGCGGCAC TCGCCGGGCT GGCGGGCGGC
GCGATGTCCG GCTGGGCGTA 501 TTTGAAAGTG CGCGAACTGT CTTTGGCGGG
CGAACCCGGC TGGCGCGTCG 551 TGTTTTACCT TTCCGTGACA GGTGTGGCGA
TGTCATCGGT TTGGGCGACG 601 CTGACCGGCT GGCACACCCT GTCCTTTCCA
TCGGCAGTTT ATCTGTCGTG 651 CATCGGCGTG TCCGCGCTGA TTGCCCAACT
GTCGATGACG CGCGCCTACA 701 AAGTCGGCGA CAAATTCACG GTTGCCTCGC
TTTCCTATAT GACCGTCGTT 751 TTTTCCGCTC TGTCTGCCGC ATTTTTTCTG
GCCGAAGAGC TTTTCTGGCA 801 GGAAATACTC GGTATGTGCA TCATCATCCT
CAGCGGTATT TTGAGCAGCA 851 TCCGCCCCAC TGCCTTCAAA CAGCGGCTGC
AATCCCTGTT CCGCCAAAGA 901 TAA
This corresponds to the amino acid sequence <SEQ ID 672; ORF
161.a>:
TABLE-US-00891 a161.pep 1 MDTAKKDILG SGWMLVAAAC FTIMNVLIKE
ASAKFALGSG ELVFWRMLFS 51 TVALGAAAVL RRDTFRTPHW KNHLNRSMVG
TGAMLLLFYA VTHLPLATGV 101 TLSYTSSIFL AVFSFLILKE RISVYTQAVL
LLGFAGVVLL LNPSFRSGQE 151 TAALAGLAGG AMSGWAYLKV RELSLAGEPG
WRVVFYLSVT GVAMSSVWAT 201 LTGWHTLSFP SAVYLSCIGV SALIAQLSMT
RAYKVGDKFT VASLSYMTVV 251 FSALSAAFFL AEELFWQEIL GMCIIILSGI
LSSIRPTAFK QRLQSLFRQR 301 * m161/a161 99.3% identity in 300 aa
overlap 10 20 30 40 50 60 m161.pep
MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a161
MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVL 10 20
30 40 50 60 70 80 90 100 110 120 m161.pep
RRDXFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKE
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a161
RRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKE 70 80
90 100 110 120 130 140 150 160 170 180 m161.pep
RISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a161
RISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPG 130
140 150 160 170 180 190 200 210 220 230 240 m161.pep
WRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a161
WRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFT 190
200 210 220 230 240 250 260 270 280 290 300 m161.pep
VASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQRLQSLFRQR
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| a161
VASLSYMTVVFSALSAAFFLAEELFWQEILGMCIIILSGILSSIRPTAFKQRLQSLFRQR 250
260 270 280 290 300 m161.pep X | a161 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 673>:
TABLE-US-00892 g163.seq 1 ATGGTTATTT TGACGACTTT GTTTTTTGTG
TGTGTTTTGG TGGTATTGGT 51 TTTAACCGTG CCGGATCAGG TGCAGATGTG
gctCGACCGG GCAAAAGAAG 101 TCATTTTTAC CGAGTTCAGC TGGTTTTATG
TTTTAACGTT TTCCATTTTt 151 ctgGGTTTtc tgctGATACT CTCGGTCAGC
GGTTTGGGAA ACATcagGCT 201 AGGACGGGAT GAAGATGTGC CGGAATTCGG
CTTCCTGTCG TGGCTGGCGA 251 TGCTGTTTGC GGCCGGGATG GGCGTGGGCC
TGATGTTTTT CGGCGTGGCA 301 GAGCCGTTGA TGCATTATTT TTCGGACATT
ACGGTCGGCG CGCCGGAACA 351 CAGGCAGCAG CAGGCATTGC TGCACACGGT
GTTCCATTGG GGCGTTCACG 401 CCTGGTCGGT GTACGGTACG ATTGCATTGG
CTTTGGCTTA TTTCGGTTTC 451 CGCTACAAAC TGCCGCTTGC CCTGCGTTCT
TGTTTTTACC CCCTGTTGAA 501 AGAAAAAATT TCCGGAAGGT TCGGCGATGC
CATTGATATT ATGGCGTTGC 551 TTGCTACTTT TTTCGGCATC ATCACCACAT
TGGGGTTCGG GGCTTCGCAA 601 CTGGGCGCCG GATTGCAGGA AATGGGCTGG
ATTGCCGAAA ACAGCTTCGG 651 CGTGCAGGTC TTGATTATCG CCGCCGTAAT
GTCCCTCGCC GTCGTTTCGG 701 CAATATCCGG CGTGGGGAAG GGCGTGAAGG
TGTTGAGCGA GTTGAACCTG 751 GGCCTTGCGT TTTTGCTGCT GTTTTTTGTT
TTGGCGGCGG ACCCCACTGT 801 TTACCTGTTG TCGGCATTCG GCGACAACAT
AGGGAACTAC CTCGGAAATC 851 TGGTGCGCCT CAGTTTGAAA ACTTATGCGT
ACGAACGGGA ACACAAGCCG 901 TGGTTTGAAT CTTGGACGGT GCTTTATTGG
GCGTGGTGGT GTTCTTGGgc 951 gcCGTTTGTG GGTTTGTTTA TCGCGCGCAT
TTCAAAGGGg cgcaccatCc 1001 gcgagtttgt CTTCGGGGTT TTGCTCATCC
CCGGCCTGTT CGGCGTTTTG 1051 TGGTTTACCG TCTTCGGCAA TACGGCGATT
TGGCTGAATG ACGGGGTTGC 1101 GGGGGGAATG CTCGAAAAGA TGACCTCCTC
TCCGGAAACG CTGCTTTTTA 1151 AATTCTTTAA TTACCTCCCC CTGCCCGAAC
TGACGAGCAT CGTCAGCCTG 1201 CTGGTCATTT CCCTGTTTTT TGTAACTTCT
GCCGACTCCG GGATTTATGT 1251 CCTGAACAAT ATTACCTCTC GGGACAAAGG
CTTGAGCGCG CCACGGTGGC 1301 AGGCGGTTAT GTGGGGCGTG CTGatgtcTG
CCGTTGCCGT TTTGCTGATG 1351 CGCTCGGGCG GACTCGGCAA CCTGCAGTCT
ATGACCCTGA TTGTTTCCCT 1401 GCCGTTTGCC CTGCTGATGC TGATAATGTG
TTTCAGCCTG TGGAAAGGCT 1451 TGAGTGCGGA TAAGAAATAT TTTGAGACCC
GGGTCAACCC TACCAGTGTA 1501 TTTTGGACGG GCGGCAAGTG GAAAGAACGG
CTGGTGCGGA TAATGAGCCA 1551 GACGCAGGAG CAGGATATTT TAAAATTCCT
CAAACATACC GCATCGCCCG 1601 CTATGCACGA GTTGCAACGG GAGCTTTCGG
AAGAATACGG CTTGAGCGTC 1651 CGGGTCGATA AGATGTTTCA TCAGGACGAG
CCCGCAATCG AGTTCGTCAT 1701 TCGGAAAGAG ACGATGCGCG ATTTTATGTA
CGGGATTAAG TCTGTCGGGC 1751 AGGATGTATC CGACCAGTTG ATTAACGACG
GCAAGCTGCC GCATATCCGG 1801 CACCAGACAA CTTACAAACC CTACGCTTAT
TTTTTCGACG GGCGCGTCGG 1851 GTACGATGTG CAGTATATGA ACAAGGACGA
GCTGATTGCC GACATTTTGA 1901 AAAACTACGA ACGTTATTTG ATGTTGTTGG
ATGATGTCGG TCAGGAACTG 1951 ATGGCGCACG AGCAGGTGGA ATTGGCAGAG TAA
This corresponds to the amino acid sequence <SEQ ID 674; ORF
163.ng>:
TABLE-US-00893 g163.pep 1 MVILTTLFFV CVLVVLVLTV PDQVQMWLDR
AKEVIFTEFS WFYVLTFSIF 51 LGFLLILSVS GLGNIRLGRD EDVPEFGFLS
WLAMLFAAGM GVGLMFFGVA 101 EPLMHYFSDI TVGAPEHRQQ QALLHTVFHW
GVHAWSVYGT IALALAYFGF 151 RYKLPLALRS CFYPLLKEKI SGRFGDAIDI
MALLATFFGI ITTLGFGASQ 201 LGAGLQEMGW IAENSFGVQV LIIAAVMSLA
VVSAISGVGK GVKVLSELNL 251 GLAFLLLFFV LAADPTVYLL SAFGDNIGNY
LGNLVRLSLK TYAYEREHKP 301 WFESWTVLYW AWWCSWAPFV GLFIARISKG
RTIREFVFGV LLIPGLFGVL 351 WFTVFGNTAI WLNDGVAGGM LEKMTSSPET
LLFKFFNYLP LPELTSIVSL 401 LVISLFFVTS ADSGIYVLNN ITSRDKGLSA
PRWQAVMWGV LMSAVAVLLM 451 RSGGLGNLQS MTLIVSLPFA LLMLIMCFSL
WKGLSADKKY FETRVNPTSV 501 FWTGGKWKER LVRIMSQTQE QDILKFLKHT
ASPAMHELQR ELSEEYGLSV 551 RVDKMFHQDE PAIEFVIRKE TMRDFMYGIK
SVGQDVSDQL INDGKLPHIR 601 HQTTYKPYAY FFDGRVGYDV QYMNKDELIA
DILKNYERYL MLLDDVGQEL 651 MAHEQVELAE *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 675>:
TABLE-US-00894 m163.seq 1 ATGGTTATTT TGACGACTTT GTTTTTTGTG
TGTGTTTTGG TGGTATTGGT 51 TTTAACCGTG CCGGATCAGG TGCAGATGTG
GCTCGATCGG GCAAAAGAAG 101 TCATTTTTAC CGAGTTCAGC TGGTTTTATG
TTTTAACGTT TTCCATTTTT 151 CTGGGTTTCC TGCTGATACT CTCGGTCAGC
AGTTTGGGAA ACATCAGGCT 201 CGGACGGGAT GAAGATGTGC CGGAATTCGG
CTTCCTGTCG TGGCTGGCGA 251 TGCTGTTTGC GGCCGGGATG GGCGTGGGTC
TGATGTTTTT CGGCGTGGCA 301 GAGCCGTTGA TGCATTATTT TTCGGACATT
ACGGCCGGCA CGCCGGAACA 351 CAGGCAGCAG CAGGCATTGC TGCACACGGT
GTTCCATTGG GGCGTTCACG 401 CTTGGTCGGT GTACGGTACG ATTGCATTGG
CTTTGGCTTA TTTCGGTTTC 451 CGCTACAAGC TGCCGCTTGC CCTGCGTTCT
TGTTTTTACC CCCTGTTGAA 501 AGAAAAAATT TCCGGAAGGT TCGGCGATGC
CATTGATATT ATGGCGTTGC 551 TTGCTACTTT TTTCGGCATC ATCACCACAT
TGGGGTTCGG GGCTTCGCAA 601 CTGGGCGCCG GATTGCAGGA AATGGGCTGG
ATTGCCGAAA ACAGCTTCAG 651 CGTGCAGGTT TTGATTATCG CCGCCGTCAT
GTCCCTCGCC GTCGTTTCGG 701 CAATATCCGG CGTGGGGAAG GGCGTGAAGG
TGTTGAGCGA GTTGAACCTG 751 GGCCTTGCGT TTTTGCTGCT GTTTTTTGTT
TTGGCGGCGG GACCCACTGT 801 TTACCTGTTG TCGGCATTCG GCGACAACAT
AGGGAACTAC CTCGGAAATC 851 TGGTGCGCCT CAGTTTTAAA ACTTATGCGT
ACGAACGGGA ACACAAGCCG 901 TGGTTTGAAT CTTGGACGGT GCTTTATTGG
GCGTGGTGGT GTTCTTGGGC 951 GCCGTTTGTG GGTTTGTTTA TCGCGCGCAT
TTCAAAGGGG CGCACCATCC 1001 GCGAGTTTGT CTTCGGGGTT TTGCTCATCC
CCGGCCTGTT CGGCGTTTTG 1051 TGGTTTACCG TCTTCGGCAA TACGGCGATT
TGGCTGAATG ACGGGGTTGC 1101 GGGGGGAATG CTCGAAAAGA TGACCTCCTC
TCCGGAAACG CTGCTTTTTA 1151 AATTCTTTAA TTACCTCCCC CTGCCCGAAT
TGACGAGCAT CGTCAGCCTG 1201 CTGGTCATTT CTCTGTTTTT TGTAACTTCT
GCCGATTCCG GGATTTATGT 1251 CCTGAACAAT ATTACCTCTC GGGACAAAGG
CTTGAGCGCG CCACGGTGGC 1301 AGGCGGTTAT GTGGGGCGTG CTGATGTCTG
CCGTTGCCGT TTTGCTGATG 1351 CGCTCGGGCG GACTCGGCAA CCTGCAGTCT
ATGACCCTGA TTGTTTCCCT 1401 GCCGTTTGCC CTGCTGATGC TGATAATGTG
TTTCAGCCTG TGGAAAGGCT 1451 TGAGTGCGGA TAAGAAATAT TTTGAGACCC
GGGTTAACCC TACCAGTGTA 1501 TTTTGGACGG GCGGCAAGTG GAAAGAACGG
CTGGTGCAGA TAATGAGCCA 1551 GACGCAGGAG CAGGATATTT TAAAATTCCT
CAAACAGACT GCATCGCCCG 1601 CTATGCACGA GTTGCAACGG GAGCTTTCGG
AAGAATACGG CTTGAGCGTC 1651 CGGGTCGATA AAATGTTTCA TCGGGACGAG
CCCGCAATCG AGTTCGTCAT 1701 TCGGAAAGAG ACGATGCGCG ATTTTATGTA
CGGGATTAAG TCTGTCGGGC 1751 AGGATGTATC CGACCAGTTG ATTAACGACG
GCAAGCTGCC GCATATCCGG 1801 CATCAGACAA CTTACAAACC CTACGCTTAT
TTTTTCGACG GGCGCGTCGG 1851 GTACGATGTG CAGTATATGA ACAAGGACGA
GCTGATTGCC GACATTTTGA 1901 AAAACTACGA ACGTTATTTG ATGTTGTTGG
ATGATGTCGG TCAGGAACTG 1951 ATGGCGCACG AGCAGGTGGA ATTGGCAGAG TAA
This corresponds to the amino acid sequence <SEQ ID 676; ORF
163>:
TABLE-US-00895 m163.pep 1 MVILTTLFFV CVLVVLVLTV PDQVQMWLDR
AKEVIFTEFS WFYVLTFSIF 51 LGFLLILSVS SLGNIRLGRD EDVPEFGFLS
WLAMLFAAGM GVGLMFFGVA 101 EPLMHYFSDI TAGTPEHRQQ QALLHTVFHW
GVHAWSVYGT IALALAYFGF 151 RYKLPLALRS CFYPLLKEKI SGRFGDAIDI
MALLATFFGI ITTLGFGASQ 201 LGAGLQEMGW IAENSFSVQV LIIAAVMSLA
VVSAISGVGK GVKVLSELNL 251 GLAFLLLFFV LAAGPTVYLL SAFGDNIGNY
LGNLVRLSFK TYAYEREHKP 301 WFESWTVLYW AWWCSWAPFV GLFIARISKG
RTIREFVFGV LLIPGLFGVL 351 WFTVFGNTAI WLNDGVAGGM LEKMTSSPET
LLFKFFNYLP LPELTSIVSL 401 LVISLFFVTS ADSGIYVLNN ITSRDKGLSA
PRWQAVMWGV LMSAVAVLLM 451 RSGGLGNLQS MTLIVSLPFA LLMLIMCFSL
WKGLSADKKY FETRVNPTSV 501 FWTGGKWKER LVQIMSQTQE QDILKFLKQT
ASPAMHELQR ELSEEYGLSV 551 RVDKMFHRDE PAIEFVIRKE TMRDFMYGIK
SVGQDVSDQL INDGKLPHIR 601 HQTTYKPYAY FFDGRVGYDV QYMNKDELIA
DILKNYERYL MLLDDVGQEL 651 MAHEQVELAE *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00896 m163/g163 98.6% identity in 660 aa overlap 10 20 30
40 50 60 m163.pep
MVILTTLFFVCVLVVLVLTVPDQVQMWLDRAKEVIFTEFSWFYVLTFSIFLGFLLILSVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
MVILTTLFFVCVLVVLVLTVPDQVQMWLDRAKEVIFTEFSWFYVLTFSIFLGFLLILSVS 10 20
30 40 50 60 70 80 90 100 110 120 m163.pep
SLGNIRLGRDEDVPEFGFLSWLAMLFAAGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQ
:||||||||||||||||||||||||||||||||||||||||||||||||||:|:|||||| g163
GLGNIRLGRDEDVPEFGFLSWLAMLFAAGMGVGLMFFGVAEPLMHYFSDITVGAPEHRQQ 70 80
90 100 110 120 130 140 150 160 170 180 m163.pep
QALLHTVFHWGVHAWSVYGTIALALAYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
QALLHTVFHWGVHAWSVYGTIALALAYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDI 130
140 150 160 170 180 190 200 210 220 230 240 m163.pep
MALLATFFGIITTLGFGASQLGAGLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGK
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| g163
MALLATFFGIITTLGFGASQLGAGLQEMGWIAENSFGVQVLIIAAVMSLAVVSAISGVGK 190
200 210 220 230 240 250 260 270 280 290 300 m163.pep
GVKVLSELNLGLAFLLLFFVLAAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKP
||||||||||||||||||||||| ||||||||||||||||||||||||:||||||||||| g163
GVKVLSELNLGLAFLLLFFVLAADPTVYLLSAFGDNIGNYLGNLVRLSLKTYAYEREHKP 250
260 270 280 290 300 310 320 330 340 350 360 m163.pep
WFESWTVLYWAWWCSWAPFVGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
WFESWTVLYWAWWCSWAPFVGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAI 310
320 330 340 350 360 370 380 390 400 410 420 m163.pep
WLNDGVAGGMLEKMTSSPETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
WLNDGVAGGMLEKMTSSPETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNN 370
380 390 400 410 420 430 440 450 460 470 480 m163.pep
ITSRDKGLSAPRWQAVMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
ITSRDKGLSAPRWQAVMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSL 430
440 450 460 470 480 490 500 510 520 530 540 m163.pep
WKGLSADKKYFETRVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKQTASPAMHELQR
||||||||||||||||||||||||||||||||:|||||||||||||||:||||||||||| g163
WKGLSADKKYFETRVNPTSVFWTGGKWKERLVRIMSQTQEQDILKFLKHTASPAMHELQR 490
500 510 520 530 540 550 560 570 580 590 600 m163.pep
ELSEEYGLSVRVDKMFHRDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIR
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| g163
ELSEEYGLSVRVDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIR 550
560 570 580 590 600 610 620 630 640 650 660 m163.pep
HQTTYKPYAYFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g163
HQTTYKPYAYFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE 610
620 630 640 650 660 m163.pep X | g163 X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 677>:
TABLE-US-00897 a163.seq 1 ATGGTTATTT TGACGACTTT GTTTTTTGTG
TGTGTTTTGG TGGTATTGGT 51 TTTAACCGTG CCGGATCAGG TGCAGATGTG
GCTCGATCGG GCAAAAGAAG 101 TCATTTTTAC CGAGTTCAGC TGGTTTTATG
TTTTAACGTT TTCCATTTTT 151 CTGGGTTTCC TGCTGATACT CTCGGTCAGC
AGTTTGGGAA ACATCAGGCT 201 CGGACGGGAT GAAGATGTGC CGGAATTCGG
CTTCCTGTCG TGGCTGGCGA 251 TGCTGTTTGC GGCCGGGATG GGCGTGGGTC
TGATGTTTTT CGGCGTGGCA 301 GAGCCGTTGA TGCATTATTT TTCGGACATT
ACGGCCGGCA CGCCGGAACA 351 CAGGCAGCAG CAGGCATTGC TGCACACGGT
GTTCCATTGG GGCGTTCACG 401 CTTGGTCGGT GTACGGTACG ATTGCATTGG
CTTTGGCTTA TTTCGGTTTC 451 CGCTACAAGC TGCCGCTTGC CCTGCGTTCT
TGTTTTTACC CCCTGTTGAA 501 AGAAAAAATT TCCGGAAGGT TCGGCGATGC
CATTGATATT ATGGCGTTGC 551 TTGCTACTTT TTTCGGCATC ATCACCACAT
TGGGGTTCGG GGCTTCGCAA 601 CTGGGCGCCG GATTGCAGGA AATAGGCTGG
ATTGCCGAAA ACAGCTTCAG 651 CGTGCAGGTT TTGATTATCG CCGCCGTCAT
GTCCCTCGCC GTCGTTTCGG 701 CAATATCCGG CGTGGGGAAG GGTGTGAAGG
TGTTGAGCGA GTTGAACCTG 751 GGTCTTGCGT TTTTGCTGCT GTTTTTTGTT
TTGGCGGCGG GTCCCACTGT 801 TTACCTGTTG TCGGCATTCG GCGACAACAT
AGGGAACTAC CTCGGAAATC 851 TGGTGCGCCT CAGTTTTAAA ACTTATGCGT
ACGAACGGGA ACACAAGCCG 901 TGGTTTGAAT CTTGGACGGT GCTTTATTGG
GCGTGGTGGT GTTCTTGGGC 951 GCCGTTTGTG GGTTTGTTTA TCGCGCGCAT
TTCAAAGGGG CGCACCATCC 1001 GCGAGTTTGT CTTCGGGGTT TTGCTCATCC
CCGGCCTGTT CGGCGTTTTG 1051 TGGTTTACCG TCTTCGGCAA TACGCCGATT
TGGCTGAATG ACGGGGTTGC 1101 GGGGGGAGTG CTCGAAAAGA TGACCTCCTC
TCCGGAAACG CTGCTTTTTA 1151 AATTCTTTAA TTACCTCCCC CTGCCCGAAT
TGACGAGCAT CGTCAGCCTG 1201 CTGGTCATTT CTCTGTTTTT TGTAACTTCT
GCCGATTCCG GGATTTATGT 1251 CCTGAACAAT ATTACCTCTC GGGACAAAGG
CTTGAGCGCG CCACGGTGGC 1301 AGGCGGTTAT GTGGGGCGTG CTGATGTCTG
CCGTTGCCGT TTTGCTGATG 1351 CGCTCGGGCG GACTCGGCAA CCTGCAGTCT
ATGACCCTGA TTGTTTCCCT 1401 GCCGTTTGCC CTGCTGATGC TGATAATGTG
TTTCAGCCTG TGGAAAGGAT 1451 TGAGTGCGGA TAAGAAATAT TTTGAGACCC
GGGTTAACCC TACCAGTGTA 1501 TTTTGGACGG GCGGCAAGTG GAAAGAACGG
CTGGTGCAGA TAATGAGCCA 1551 GACGCAGGAG CAGGATATTT TAAAATTCCT
CAAACATACC GCATCGCCCG 1601 CTATGCACGA GTTACAACGG GAGCTTTCGG
AAGAATACGG CTTGAGCGTC 1651 CGGGTCGATA AGATGTTTCA TCAGGACGAG
CCCGCAATCG AGTTCGTCAT 1701 TCGGAAAGAG ACGATGCGCG ATTTTATGTA
CGGGATTAAG TCTGTCGGGC 1751 AGGATGTATC CGACCAGTTG ATTAACGACG
GCAAGCTGCC GCATATCCGG 1801 CATCAGACAA CTTACAAACC CTACGCTTAT
TTTTTCGACG GGCGCGTCGG 1851 GTACGATGTG CAGTATATGA ACAAGGACGA
GCTGATTGCC GACATTTTGA 1901 AAAACTACGA ACGTTATTTG ATGTTGTTGG
ATGATGTCGG TCAGGAACTG 1951 ATGGCGCACG AGCAGGTGGA ATTGGCAGAG TAA
This corresponds to the amino acid sequence <SEQ ID 678; ORF
163.a>:
TABLE-US-00898 a163.pep 1 MVILTTLFFV CVLVVLVLTV PDQVQMWLDR
AKEVIFTEFS WFYVLTFSIF 51 LGFLLILSVS SLGNIRLGRD EDVPEFGFLS
WLAMLFAAGM GVGLMFFGVA 101 EPLMHYFSDI TAGTPEHRQQ QALLHTVFHW
GVHAWSVYGT IALALAYFGF 151 RYKLPLALRS CFYPLLKEKI SGRFGDAIDI
MALLATFFGI ITTLGFGASQ 201 LGAGLQEIGW IAENSFSVQV LIIAAVMSLA
VVSAISGVGK GVKVLSELNL 251 GLAFLLLFFV LAAGPTVYLL SAFGDNIGNY
LGNLVRLSFK TYAYEREHKP 301 WFESWTVLYW AWWCSWAPFV GLFIARISKG
RTIREFVFGV LLIPGLFGVL 351 WFTVFGNTAI WLNDGVAGGV LEKMTSSPET
LLFKFFNYLP LPELTSIVSL 401 LVISLFFVTS ADSGIYVLNN ITSRDKGLSA
PRWQAVMWGV LMSAVAVLLM 451 RSGGLGNLQS MTLIVSLPFA LLMLIMCFSL
WKGLSADKKY FETRVNPTSV 501 FWTGGKWKER LVQIMSQTQE QDILKFLKHT
ASPAMHELQR ELSEEYGLSV 551 RVDKMFHQDE PAIEFVIRKE TMRDFMYGIK
SVGQDVSDQL INDGKLPHIR 601 HQTTYKPYAY FFDGRVGYDV QYMNKDELIA
DILKNYERYL MLLDDVGQEL 651 MAHEQVELAE * m163/a163 99.4% identity in
660 aa overlap 10 20 30 40 50 60 m163.pep
MVILTTLFFVCVLVVLVLTVPDQVQMWLDRAKEVIFTEFSWFYVLTFSIFLGFLLILSVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
MVILTTLFFVCVLVVLVLTVPDQVQMWLDRAKEVIFTEFSWFYVLTFSIFLGFLLILSVS 10 20
30 40 50 60 70 80 90 100 110 120 m163.pep
SLGNIRLGRDEDVPEFGFLSWLAMLFAAGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
SLGNIRLGRDEDVPEFGFLSWLAMLFAAGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQ 70 80
90 100 110 120 130 140 150 160 170 180 m163.pep
QALLHTVFHWGVHAWSVYGTIALALAYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
QALLHTVFHWGVHAWSVYGTIALALAYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDI 130
140 150 160 170 180 190 200 210 220 230 240 m163.pep
MALLATFFGIITTLGFGASQLGAGLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGK
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a163
MALLATFFGIITTLGFGASQLGAGLQEIGWIAENSFSVQVLIIAAVMSLAVVSAISGVGK 190
200 210 220 230 240 250 260 270 280 290 300 m163.pep
GVKVLSELNLGLAFLLLFFVLAAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
GVKVLSELNLGLAFLLLFFVLAAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKP 250
260 270 280 290 300 310 320 330 340 350 360 m163.pep
WFESWTVLYWAWWCSWAPFVGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
WFESWTVLYWAWWCSWAPFVGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAI 310
320 330 340 350 360 370 380 390 400 410 420 m163.pep
WLNDGVAGGMLEKMTSSPETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNN
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| a163
WLNDGVAGGVLEKMTSSPETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNN 370
380 390 400 410 420 430 440 450 460 470 480 m163.pep
ITSRDKGLSAPRWQAVMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
ITSRDKGLSAPRWQAVMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSL 430
440 450 460 470 480 490 500 510 520 530 540 m163.pep
WKGLSADKKYFETRVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKQTASPAMHELQR
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| a163
WKGLSADKKYFETRVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQR 490
500 510 520 530 540 550 560 570 580 590 600 m163.pep
ELSEEYGLSVRVDKMFHRDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIR
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| a163
ELSEEYGLSVRVDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIR 550
560 570 580 590 600 610 620 630 640 650 660 m163.pep
HQTTYKPYAYFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a163
HQTTYKPYAYFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE 610
620 630 640 650 660 m163.pep X | a163 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 679>:
TABLE-US-00899 g164.seq (partial) 1 ..ATGAACACAT TTTTGAAAAA
CAGCGAATAC GCGTATATCC TGAACGACTG 51 CAAGGCGCGC TTCCTGTTCG
CCTCGGCCGG CCTGTCAAAA GAATTGGCGG 101 GCCTGAAGGC GCAAACGCCC
GTCGAAAAAA TCATTTGGAC GGACAAAAGC 151 CGGCCGGCCG GCGAAACGGC
GGAAGGCGAT GCCTTTTTTG AAAACGTGCG 201 CCGCTTCCCC GAAAAACCCG
ACTTGGGCCG CCAACCCCGG ATAAATGATT 251 TGGCACACAT CATCTACACC
TCCGGCACGA CGGGGCATCC CAAAGGCGCG 301 CTAATCAGTT ACGCCAACCT
GTTCGCCAAC CTGAACGGCA TCGAACGCAT 351 CTTtaaAATT TCCAAACGCG
ACCGCTTTAT CGTTTTCctg ccgatgTTCC 401 ACAGCTTCAC GCTGACGGCT
ATGGTGCTGC TGCCGATTTA TATGGCGTGT 451 TCGATTATTT TGGTCAAAtc
cgttttCCCc ttttccaacG TTTTGAAACA 501 GGCCCTGCTC AAACGCGCAA
CCGTGTTTTT GGGCGTACCC GCGATTTACA 551 CCGCGATGAG CAAGGCAAAA
ATCCCTTGGT ATTTCAGATG GTTCAACCGC 601 ATCCGCCTGT TTATCAGCGG
CGGCGCGCCT TTGGCGGAAC AAACCATCCT 651 CGATTTTAAA GCCAAGTTCC
CCCGCGCCAA ATTGCTGGAA GGCTACGGAC 701 TGAGCGAAGC CTCGCCCGTC
GTCGCCGTCA ATACGCCCGA ACGGCAAAAA 751 GCCCGCAGCG TCGGCATCCC
CCTGCCCGGT TTGGAAGCCA AAGCCGTCGA 801 TGAAGAATTG GTCGAAGTGC
CGCGCGGCGA AGTGGGCGAA CTGATCGTCA 851 GGGGCGGTTC GGTGATGCGG
GGCTACCTCA ATATGCCTGC CGCCACCGAT 901 GAAACCATCG TCAACGGCTG
GTTGAAAACG GGCGATTTCG TTACCATAGA 951 CGAGGACGGC TTTATCTTTA
TCGTCGACCG CAAAAAAGAT TTGATTATTT 1001 CCAAAGGTCA AAACGTCTAT
CCGCGCGAGA TCGAAGAAGA AATCCACAAA 1051 CTCGATGCCG TCGAAGCCGC
CGCCGTCATC GGCGTGAAAG ACCGTTATGC 1101 CGACGAGGAA ATCGTCGCCT
TCGTCCAATT GAAGGAAGGT ATGGATTTGG 1151 GCGAGGACGA aatccgccgc
caccTGCGTA CCGTGCTGGC AAATTTCAAA 1201 ATCCCCAAAC AGATCCACTT
TAAAGACGGG CTGCCGCGCA ACGCTACGGG 1251 CAAAGTATTG AAACGGGTGC
TGAAGGAGCA GTTTGAAGGA AACAAATGA
This corresponds to the amino acid sequence <SEQ ID 680; ORF
164.ng>:
TABLE-US-00900 g164.pep (partial) 1 ..MNTFLKNSEY AYILNDCKAR
FLFASAGLSK ELAGLKAQTP VEKIIWTDKS 51 RPAGETAEGD AFFENVRRFP
EKPDLGRQPR INDLAHIIYT SGTTGHPKGA 101 LISYANLFAN LNGIERIFKI
SKRDRFIVFL PMFHSFTLTA MVLLPIYMAC 151 SIILVKSVFP FSNVLKQALL
KRATVFLGVP AIYTAMSKAK IPWYFRWFNR 201 IRLFISGGAP LAEQTILDFK
AKFPRAKLLE GYGLSEASPV VAVNTPERQK 251 ARSVGIPLPG LEAKAVDEEL
VEVPRGEVGE LIVRGGSVMR GYLNMPAATD 301 ETIVNGWLKT GDFVTIDEDG
FIFIVDRKKD LIISKGQNVY PREIEEEIHK 351 LDAVEAAAVI GVKDRYADEE
IVAFVQLKEG MDLGEDEIRR HLRTVLANFK 401 IPKQIHFKDG LPRNATGKVL
KRVLKEQFEG NK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 681>:
TABLE-US-00901 m164.seq 1 ATGAACCGGA CTTATGCCAA TTTCTACGAA
ATGCTCGCCG CCGCCTGCCG 51 CAAAAACGGA AACGGCACGG CAGTGTTCGA
CGGCAAGGAA AAAACCGCCT 101 ACCGCGCGCT CAAGCAGGAG GCCGAAGCCG
TCGCGGCGTA TCTGCAAAAT 151 ATCGGCGTGA AGTTCGGCGA CACGGTCGCG
CTGGCGGTTT CCAATTCCAC 201 AGAATTTATT ACCGCCTATT TCGCCATCTC
CGCCATCGGC GCGGTCGCCG 251 TACCGATGAA CACATTTTTG AAAAACAGCG
AATACGCGTA TATCCTGAAC 301 GACTGCAAGG CGCGCTTCCT GTTCGCCTCG
GCCGGCCTGT CAAAAGAATT 351 GGCGGGCTTG AAGGCGCAAA CGCCCGTCGA
AAAAATCATT TGGACGGACA 401 AAAGCCGTCC GACCGGCGAA ACGGCGGAAG
GCGATGCCTT TTTTGAAGAC 451 GTGCGCCGCT TCCCCGAAAA ACCCGACTTG
GGCCGCCAAC CCCGGATAAA 501 TGATTTGGCA CACATCATCT ACACCTCCGG
CACGACGGGG CATCCCAAAG 551 GCGCGCTAAT CAGTTACGCC AACCTGTTCG
CCAACCTGAA CGGCATCGAA 601 CGCATCTTTA AAATTTCCAA GCGCGACCGC
TTTATCGTTT TCCTGCCGAT 651 GTTCCACAGC TTCACGCTGA CGGCTATGGT
GCTGCTGCCG ATTTATATGG 701 CGTGTTCGAT TATTTTGGTC AAATCCGTTT
TTCCGTTTTC CAACGTTTTG 751 AAACAGACAC TGCTCAAACG CGCGACCGTG
TTTTTGGGCG TACCCGCGAT 801 TTACACCGCG ATGAGCAAGG CGAAAATCCC
TTGGTATTTC AGATGGTTCA 851 ACCGCATTCG CCTGTTTATC AGCGGCGGCG
CGCCTTTGGC GGAACAAACC 901 ATCCTCGATT TCAAAGCCAA GTTCCCCCGC
GCCAAATTGC TGGAAGGCTA 951 CGGACTGAGC GAAGCCTCTC CCGTCGTCGC
CGTCAATACG CCCGAGAGGC 1001 AAAAAGCCCG CAGCGTCGGC ATCCCCCTGC
CCGGTTTGGA AGCCAAAGCC 1051 GTCGATGAAG AATTGGTCGA AGTGCCGCGC
GGCGAAGTGG GCGAACTGAT 1101 CGTCAGGGGC GGTTCGGTGA TGCGGGGCTA
CCTCAATATG CCTGCCGCCA 1151 CCGATGAAAC CATCGTCAAC GGCTGGTTGA
AAACGGGCGA TTTCGTTACC 1201 ATAGACGAAG ACGGCTTTAT CTTTATCGTC
GACCGCAAAA AAGATTTGAT 1251 TATTTCCAAA GGTCAAAATG TCTATCCGCG
CGAGATTGAA GAAGAAATCT 1301 ACAAACTCGA TGCCGTCGAA GCCGCCGCCG
TCATCGGCGT GAAAGACCGT 1351 TATGCCGACG AGGAAATCGT CGCCTTCGTC
CAATTGAAGG AAGGTATGGA 1401 TTTGGGCGAG AACGAAATCC GCCGCCACCT
GCGTACCGTG CTGGCAAATT 1451 TCAAAATCCC CAAACAAATC CACTTTAAAG
ACGGGCTGCC GCGCAACGCT 1501 ACGGGCAAGG TATTGAAACG GGTGTTGAAG
GAGCAGTTTG ACGGAAACAA 1551 ATGA
This corresponds to the amino acid sequence <SEQ ID 682; ORF
164>:
TABLE-US-00902 m164.pep 1 MNRTYANFYE MLAAACRKNG NGTAVFDGKE
KTAYRALKQE AEAVAAYLQN 51 IGVKFGDTVA LAVSNSTEFI TAYFAISAIG
AVAVPMNTFL KNSEYAYILN 101 DCKARFLFAS AGLSKELAGL KAQTPVEKII
WTDKSRPTGE TAEGDAFFED 151 VRRFPEKPDL GRQPRINDLA HIIYTSGTTG
HPKGALISYA NLFANLNGIE 201 RIFKISKRDR FIVFLPMFHS FTLTAMVLLP
IYMACSIILV KSVFPFSNVL 251 KQTLLKRATV FLGVPAIYTA MSKAKIPWYF
RWFNRIRLFI SGGAPLAEQT 301 ILDFKAKFPR AKLLEGYGLS EASPVVAVNT
PERQKARSVG IPLPGLEAKA 351 VDEELVEVPR GEVGELIVRG GSVMRGYLNM
PAATDETIVN GWLKTGDFVT 401 IDEDGFIFIV DRKKDLIISK GQNVYPREIE
EEIYKLDAVE AAAVIGVKDR 451 YADEEIVAFV QLKEGMDLGE NEIRRHLRTV
LANFKIPKQI HFKDGLPRNA 501 TGKVLKRVLK EQFDGNK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
m164/g164 98.6% identity in 432 aa overlap
TABLE-US-00903 60 70 80 90 100 110 m164.pep
GDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDCKARFLFASAGLSK
|||||||||||||||||||||||||||||| g164 MNTFLKNSEYAYILNDCKARFLFASAGLSK
10 20 30 120 130 140 150 160 170 m164.pep
ELAGLKAQTPVEKIIWTDKSRPTGETAEGDAFFEDVRRFPEKPDLGRQPRINDLAHIIYT
||||||||||||||||||||||:|||||||||||:||||||||||||||||||||||||| g164
ELAGLKAQTPVEKIIWTDKSRPAGETAEGDAFFENVRRFPEKPDLGRQPRINDLAHIIYT 40 50
60 70 80 90 180 190 200 210 220 230 m164.pep
SGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMFHSFTLTAMVLLPIYMAC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g164
SGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMFHSFTLTAMVLLPIYMAC 100
110 120 130 140 150 240 250 260 270 280 290 m164.pep
SIILVKSVFPFSNVLKQTLLKRATVFLGVPAIYTAMSKAKIPWYFRWFNRIRLFISGGAP
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| g164
SIILVKSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKAKIPWYFRWFNRIRLFISGGAP 160
170 180 190 200 210 300 310 320 330 340 350 m164.pep
LAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQKARSVGIPLPGLEAKAVDEEL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g164
LAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQKARSVGIPLPGLEAKAVDEEL 220
230 240 250 260 270 360 370 380 390 400 410 m164.pep
VEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGWLKTGDFVTIDEDGFIFIVDRKKD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g164
VEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGWLKTGDFVTIDEDGFIFIVDRKKD 280
290 300 310 320 330 420 430 440 450 460 470 m164.pep
LIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDRYADEEIVAFVQLKEGMDLGENEIRR
||||||||||||||||||:||||||||||||||||||||||||||||||||||||:|||| g164
LIISKGQNVYPREIEEEIHKLDAVEAAAVIGVKDRYADEEIVAFVQLKEGMDLGEDEIRR 340
350 360 370 380 390 480 490 500 510 m164.pep
HLRTVLANFKIPKQIHFKDGLPRNATGKVLKRVLKEQFDGNKX
||||||||||||||||||||||||||||||||||||||:|||| g164
HLRTVLANFKIPKQIHFKDGLPRNATGKVLKRVLKEQFEGNKX 400 410 420 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 683>:
TABLE-US-00904 a164.seq 1 ATGAACCGGA CTTATGCCAA TTTCTACGAA
ATGCTGACCG CCGCCTGCCG 51 CAAAAACGGC AACGGCACGG CAGTGTTCGA
CGGCAAGGAA AAAACCGCCT 101 ACCGCGCGCT CAAGCAGGAA GCCGAAGCCG
TTGCGGCGTA TCTGCAAAAT 151 ATCGGCGTGA AGTTCGGCGA CACGGTCGCG
CTGGCGGTTT CCAATTCCAC 201 GGAATTTATT ACCGCCTATT TCGCCGTATC
CGCCATCGGC GCGGTTGCCG 251 TACCGATGAA CACATTTTTG AAAAACAGCG
AATACGCGTA TATCCTGAAC 301 GACTGCAAGG CGCGCTTCCT GTTCGCCTCG
GCCGGCCTGT CAAAAGAATT 351 GGCGGGCTTG AAGGCGCAAA CGCCCGTCGA
AAAAATCATT TGGACGGGCC 401 AAAGCCGTCC GGACGGCGAA ATGGCGGAAG
GCGATGCCTT TTTTGAAGAC 451 GTGCGCCGCT TCCCCGAAAA ACCCGACTTG
GGCCGCCAAC CCCGGATAAA 501 TGATTTGGCA CACATCATCT ACACCTCCGG
CACGACGGGG CATCCCAAAG 551 GTGCGCTAAT CAGCTACGCC AACCTGTTCG
CCAACCTGAA CGGCATCGAA 601 CGCATCTTTA AAATCTCCAA GCGCGACCGC
TTTATCGTTT TCCTGCCGAT 651 GTTCCACAGC TTCACGCTGA CGGCTATGGT
GCTGCTGCCG ATTTATATGG 701 CGTGTTCGAT TATTTTGGTC AAATCCGTTT
TCCCCTTTTC CAACGTTTTG 751 AAACAGGCAC TGCTCAAACG CGCGACCGTG
TTTTTGGGCG TGCCCGCGAT 801 TTACACCGCG ATGAGCAAGA CGAAAATCCC
TTGGTATTTC AGATGGTTCA 851 ACCGCATCCG CCTGTTTATC AGCGGCGGAG
CACCTTTGGC GGAACAAACC 901 ATCCTCGATT TCAAAGCCAA GTTCCCCCGC
GCCAAATTGC TGGAAGGCTA 951 CGGACTGAGC GAAGCCTCGC CCGTCGTCGC
CGTCAATACG CCCGAGAGGC 1001 AAAAAGCCCG CAGCGTCGGC ATCCCCCTGC
CCGGTTTGGA AGTCAAAGCC 1051 GTCGATGAAG AATTGGTCGA AGTGCCGCGC
GGCGAAGTGG GCGAACTGAT 1101 CGTCAGGGGC GGTTCGGTGA TGCGGGGCTA
CCTCAATATG CCTGCCGCCA 1151 CCGATGAAAC CATCGTCAAC GGCTGGTTGA
AAACGGGCGA TTTCGTTACC 1201 ATAGACGAAG ACGGCTTTAT CTTTATCGTC
GACCGCAAAA AAGATTTGAT 1251 TATTTCCAAA GGTCAAAATG TCTATCCGCG
CGAAATCGAA GAAGAAATCT 1301 ACAAACTCGA TGCCGTCGAA GCCGCCGCCG
TCATCGGCGT GAAAGACCGT 1351 TATGCCGACG AGGAAATCGT CGCCTTCGTC
CAATTGAAGG AAGGTATGGA 1401 TTTGGGCGAG AACGAAATCC GCCGCCACCT
GCGTACCGTG CTGGCAAATT 1451 TCAAAATCCC CAAACAAATC CACTTTAAAG
ACGGGCTGCC GCGCAACGCT 1501 ACGGGCAAGG TATTGAAACG GGTGTTGAAG
GAGCAGTTTG ACGGAAACAA 1551 ATGA
This corresponds to the amino acid sequence <SEQ ID 684; ORF
164.a>:
TABLE-US-00905 a164.pep 1 MNRTYANFYE MLTAACRKNG NGTAVFDGKE
KTAYRALKQE AEAVAAYLQN 51 IGVKFGDTVA LAVSNSTEFI TAYFAVSAIG
AVAVPMNTFL KNSEYAYILN 101 DCKARFLFAS AGLSKELAGL KAQTPVEKII
WTGQSRPDGE MAEGDAFFED 151 VRRFPEKPDL GRQPRINDLA HIIYTSGTTG
HPKGALISYA NLFANLNGIE 201 RIFKISKRDR FIVFLPMFHS FTLTAMVLLP
IYMACSIILV KSVFPFSNVL 251 KQALLKRATV FLGVPAIYTA MSKTKIPWYF
RWFNRIRLFI SGGAPLAEQT 301 ILDFKAKFPR AKLLEGYGLS EASPVVAVNT
PERQKARSVG IPLPGLEVKA 351 VDEELVEVPR GEVGELIVRG GSVMRGYLNM
PAATDETIVN GWLKTGDFVT 401 IDEDGFIFIV DRKKDLIISK GQNVYPREIE
EEIYKLDAVE AAAVIGVKDR 451 YADEEIVAFV QLKEGMDLGE NEIRRHLRTV
LANFKIPKQI HFKDGLPRNA 501 TGKVLKRVLK EQFDGNK* m164/a164 98.3%
identity in 517 aa overlap 10 20 30 40 50 60 m164.pep
MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAVAAYLQNIGVKFGDTVA
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a164
MNRTYANFYEMLTAACRKNGNGTAVFDGKEKTAYRALKQEAEAVAAYLQNIGVKFGDTVA 10 20
30 40 50 60 70 80 90 100 110 120 m164.pep
LAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDCKARFLFASAGLSKELAGL
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a164
LAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDCKARFLFASAGLSKELAGL 70 80
90 100 110 120 130 140 150 160 170 180 m164.pep
KAQTPVEKIIWTDKSRPTGETAEGDAFFEDVRRFPEKPDLGRQPRINDLAHIIYTSGTTG
|||||||||||| :||| || ||||||||||||||||||||||||||||||||||||||| a164
KAQTPVEKIIWTGQSRPDGEMAEGDAFFEDVRRFPEKPDLGRQPRINDLAHIIYTSGTTG 130
140 150 160 170 180 190 200 210 220 230 240 m164.pep
HPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMFHSFTLTAMVLLPIYMACSIILV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a164
HPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMFHSFTLTAMVLLPIYMACSIILV 190
200 210 220 230 240 250 260 270 280 290 300 m164.pep
KSVFPFSNVLKQTLLKRATVFLGVPAIYTAMSKAKIPWYFRWFNRIRLFISGGAPLAEQT
||||||||||||:||||||||||||||||||||:|||||||||||||||||||||||||| a164
KSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKTKIPWYFRWFNRIRLFISGGAPLAEQT 250
260 270 280 290 300 310 320 330 340 350 360 m164.pep
ILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQKARSVGIPLPGLEAKAVDEELVEVPR
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a164
ILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQKARSVGIPLPGLEVKAVDEELVEVPR 310
320 330 340 350 360 370 380 390 400 410 420 m164.pep
GEVGELIVRGGSVMRGYLNMPAATDETIVNGWLKTGDFVTIDEDGFIFIVDRKKDLIISK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a164
GEVGELIVRGGSVMRGYLNMPAATDETIVNGWLKTGDFVTIDEDGFIFIVDRKKDLIISK 370
380 390 400 410 420 430 440 450 460 470 480 m164.pep
GQNVYPREIEEEIYKLDAVEAAAVIGVKDRYADEEIVAFVQLKEGMDLGENEIRRHLRTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a164
GQNVYPREIEEEIYKLDAVEAAAVIGVKDRYADEEIVAFVQLKEGMDLGENEIRRHLRTV 430
440 450 460 470 480 490 500 510 m164.pep
LANFKIPKQIHFKDGLPRNATGKVLKRVLKEQFDGNKX
|||||||||||||||||||||||||||||||||||||| a164
LANFKIPKQIHFKDGLPRNATGKVLKRVLKEQFDGNKX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 685>:
TABLE-US-00906 g165.seq 1 ATGGCTGAAG CGACAGACGT TGTCTTGGTG
GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA AAGAACTCGA
ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAagat gTGGCGTTGG
AATCGTCAAA cGCGTGGAAC 151 AACGcCGgca CGGGGCATTC CGcGCTGTGc
GAATTGAACT AtgcgccGCT 201 GGGtgcggac ggcgtcatCA ATCCGGCGCg
cgCCCTGAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG TTTTGGGcga
cgctgGTCGC GGAAGGCAAG 301 TTGGAagaCA ATTCCTTCAT CAATGCcgtg
ccgcatatGT Ctttggtgat 351 gAacgaagac cactgCCgtt acCTGCAAAA
ACGCTATGAT GTGTTTAAAA 401 CGCAGAAACT TTTTGAAAAT ATGGAATTTT
CCACCGATCG GAACAAAATT 451 TCCGATTGGG CtccgCTGAT TATGCGCGGC
CGGgacgaaA ACCAACCCGT 501 CGCCGCCAAC TATTCCGCCG Aaggcacgga
tgtcgATTTC GGACGGCTGA 551 CGCGCCAGAT GGTGAAATAT TTGCAGGGCA
AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT CAAACGCGAA
TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA ACCCAGACTG
GCAGCTCACC CTCCGCACCC 701 GCTTCCTCTT CCTCGGCGCG GGCGGCGGCG
CACTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA AGGCTACGGC
GGCTTACCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC CCGAAACCGC
CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC GGCGCGCCGC
CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTAGACGG CAAACGACAC
CTTATGTTCG GTCCTTACGC 951 AGGTTTCCGT TCCAACTTCC TCAAGCAAGG
CTCGTTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC CTCTATCCTA
TGCTGCGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAATA CcTGCTGGgC
gAaTTGCgtt aa
This corresponds to the amino acid sequence <SEQ ID 686; ORF
165.ng>:
TABLE-US-00907 g165.pep 1 MAEATDVVLV GGGIMSATLG VLLKELEPSW
EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAD GVINPARALN
IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED HCRYLQKRYD
VFKTQKLFEN MEFSTDRNKI 151 SDWAPLIMRG RDENQPVAAN YSAEGTDVDF
GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA DTRNPDWQLT
LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GLPVSGLFFR NSNPETAEQH
NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR SNFLKQGSFM
DLPLSIHMDN LYPMLRAGWA 351 NMPLTKYLLG ELR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 687>:
TABLE-US-00908 m165.seq (partial) 1 ATGGCTGAAG CGACAGACGT
TGTCTTGGTG GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA
AAGAACTCGA ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAAGAT
GTGGCGTTGG AATCGTCAAA CGCGTGGAAC 151 AACGCCGGCA CGGGGCATTC
CGCGCTGTGC GAATTGAACT ATGCGCCGTT 201 GGGTGCAAAT GGGATTATCG
ATCCGGCGCG CGCCCTCAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG
TTTTGGGCGA CGCTGGTCGC GGAAGGCAAG 301 TTGGAAGACA ATTCCTTCAT
CAATGCCGTG CCGCATATGT CTTTGGTGAT 351 GAATGAAGAC CATTGTTCTT
ATCTTCAAAA ACGTTATGAC GCGTTTAAAA 401 CCCAAAAACT TTTTGAAAAT
ATGGAATTTT CCACCGATCG GAACAAAATT 451 TCCGATTGGG CTCCGCTGAT
GATGCGCGGC CGGGACGAAA ACCAACCCGT 501 CGCCGCCAAC TACTCCGCCG
AAGgTACGGA TGTCGATTTC GGACGGCTGA 551 CGCGCCAAAT GGTGAAATAT
TTGCAGGGCA AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT
CAAACGCGAA TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA
ACCCCGACGG GCAGCTCACC CTCCGTACCC 701 GCTTCCTCTT CCTCGGCGCG
GGCGGCGGCG CGCTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA
AGGCTACGGC GGCTTCCCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC
CCGAAACCGC CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC
GGCGCGCCGC CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTGGACGG
CAAACGCCAC CTTATGTTCG GCCCTTACGC 951 AGGCTTCCGT TCCAACTTCC
TCAAGCAAGG CTCGCTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC
CTCTATCCTA TGCTGTGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAA...
This corresponds to the amino acid sequence <SEQ ID 688; ORF
165>:
TABLE-US-00909 m165.pep (partial) 1 MAEATDVVLV GGGIMSATLG
VLLKELEPSW EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAN
GIIDPARALN IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED
HCSYLQKRYD AFKTQKLFEN MEFSTDRNKI 151 SDWAPLMMRG RDENQPVAAN
YSAEGTDVDF GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA
DTRNPDGQLT LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GFPVSGLFFR
NSNPETAEQH NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR
SNFLKQGSLM DLPLSIHMDN LYPMLCAGWA 351 NMPLTK...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-00910 m165/g165 97.2% identity in 356 aa overlap 10 20 30
40 50 60 m165.pep
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g165
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC 10 20
30 40 50 60 70 80 90 100 110 120 m165.pep
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED
|||||||||:|:|:|||||||||||||||||||||||||||||||||||||||||||||| 8165
ELNYAPLGADGVINPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED 70 80
90 100 110 120 130 140 150 160 170 180 m165.pep
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF ||
|||||||:|||||||||||||||||||||||||:||||||||||||||||||||||| 8165
HCRYLQKRYDVFKTQKLFENMEFSTDRNKISDWAPLIMRGRDENQPVAANYSAEGTDVDF 130
140 150 160 170 180 190 200 210 220 230 240 m165.pep
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 8165
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDWQLTLRTRFLFLGA 190
200 210 220 230 240 250 260 270 280 290 300 m165.pep
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g165
GGGALTLLQKSGIPEGKGYGGLPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL 250
260 270 280 290 300 310 320 330 340 350 m165.pep
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLCAGWANMPLTK
||||||||||||||||||||||||||||:|||||||||||||||| |||||||||| 8165
DTRNVDGKRHLMFGPYAGFRSNFLKQGSFMDLPLSIHMDNLYPMLRAGWANMPLTKYLLG 310
320 330 340 350 360 8165 ELRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 689>:
TABLE-US-00911 a165.seq 1 ATGGCTGAAG CGACAGACGT TGTCTTGGTG
GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA AAGAACTCGA
ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAAGAT GTGGCGTTGG
AATCGTCAAA CGCGTGGAAC 151 AACGCCGGCA CGGGGCATTC CGCGCTGTGC
GAATTGAACT ATGCGCCGTT 201 GGGTGCAAAT GGGATTATCG ATCCGGCGCG
CGCCCTCAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG TTTTGGGCGA
CGTTGGTCGC GGAAGGCAAG 301 TTGGAAGACA ATTCCTTCAT CAATGCCGTG
CCGCATATGT CTTTGGTGAT 351 GAATGAAGAC CATTGTTCTT ATCTTCAAAA
ACGTTATGAC GCGTTTAAAA 401 CCCAAAAACT TTTTGAAAAT ATGGAATTTT
CCACCGATCG GAACAAAATT 451 TCCGATTGGG CTCCGCTGAT GATGCGCGGC
CGGGACGAAA ACCAACCCGT 501 CGCCGCCAAC TACTCCGCCG AAGGCACGGA
TGTCGATTTC GGACGGCTGA 551 CGCGCCAAAT GGTGAAATAT TTGCAGGGCA
AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT CAAACGCGAA
TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA ACCCCGACGG
GCAGCTCACC CTCCGTACCC 701 GCTTCCTCTT CCTCGGCGCG GGCGGCGGCG
CGCTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA AGGCTACGGT
GGCTTTCCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC CCGAAACCGC
CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC GGCGCGCCGC
CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTGGACGG CAAACGCCAC
CTTATGTTCG GCCCTTACGC 951 AGGCTTCCGT TCCAACTTCC TCAAGCAAGG
CTCACTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC CTCTATCCTA
TGCTGCGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAATA CCTGCTGGGC
GAATTGCGTA AAACCAAAGA 1101 AGAACGCTTC GCCTCCCTGC TGGAATACTA
CCCCGAGGCA AACCCCGACG 1151 ACTGGGAACT CATCACCGCA GGGCAACGCG
TTCAAATCAT TAAAAAAGAC 1201 TCCGAAAAAG GCGGCGTGTT GCAGTTTGGT
ACGGAGATTG TCGCACACGC 1251 CGACGGCTCG CTCGCCGCAT TGCTGGGCGC
GTCGCCGGGC GCATCGACCG 1301 CCGTGCCGCT GATGATCCGG CTGATGCACC
AATGCTTCCC CGAACGCACC 1351 CCGTCTTGGG AAGGCCGTCT GAAAGAGCTG
GTACCGGGTT ACGGCATCAA 1401 GTTGAACGAA AACCCCGAAA GGGCGGATGA
AATTATCGCC TATACCGCGA 1451 AAGTGTTGGA TATTTAA
This corresponds to the amino acid sequence <SEQ ID 690; ORF
165.a>:
TABLE-US-00912 a165.pep 1 MAEATDVVLV GGGIMSATLG VLLKELEPSW
EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAN GIIDPARALN
IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED HCSYLQKRYD
AFKTQKLFEN MEFSTDRNKI 151 SDWAPLMMRG RDENQPVAAN YSAEGTDVDF
GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA DTRNPDGQLT
LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GFPVSGLFFR NSNPETAEQH
NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR SNFLKQGSLM
DLPLSIHMDN LYPMLRAGWA 351 NMPLTKYLLG ELRKTKEERF ASLLEYYPEA
NPDDWELITA GQRVQIIKKD 401 SEKGGVLQFG TEIVAHADGS LAALLGASPG
ASTAVPLMIR LMHQCFPERT 451 PSWEGRLKEL VPGYGIKLNE NPERADEIIA
YTAKVLDI* m165/a165 99.7% identity in 356 aa overlap 10 20 30 40 50
60 m165.pep
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a165
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC 10 20
30 40 50 60 70 80 90 100 110 120 m165.pep
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a165
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED 70 80
90 100 110 120 130 140 150 160 170 180 m165.pep
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a165
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF 130
140 150 160 170 180 190 200 210 220 230 240 m165.pep
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a165
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA 190
200 210 220 230 240 250 260 270 280 290 300 m165.pep
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a165
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL 250
260 270 280 290 300 310 320 330 340 350 m165.pep
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLCAGWANMPLTK
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a165
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLRAGWANMPLTKYLLG 310
320 330 340 350 360 a165
ELRKTKEERFASLLEYYPEANPDDWELITAGQRVQIIKKDSEKGGVLQFGTEIVAHADGS 370
380 390 400 410 420
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 691>:
TABLE-US-00913 g165-1.seq 1 ATGGCTGAAG CGACAGACGT TGTCTTGGTG
GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA AAGAACTCGA
ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAagat gTGGCGTTGG
AATCGTCAAA cGCGTGGAAC 151 AACGcCGgca CGGGGCATTC CGcGCTGTGc
GAATTGAACT AtgcgccGCT 201 GGGtgcggac ggcgtcatCA ATCCGGCGCg
cgCCCTGAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG TTTTGGGcga
cgctggTCGC GGAAGGCAAG 301 TTGGAAGACA ATTCCTTCAT CAATGCCGTG
CCGCATATGT CTTTGGTGAT 351 GAACGAAGAC CACTGCCGTT ACCTGCAAAA
ACGCTATGAT GTGTTTAAAA 401 CGCAGAAACT TTTTGAAAAT ATGGAATTTT
CCACCGATCG GAACAAAATT 451 TCCGATTGGG CtccgCTGAT TATGCGCGGC
CGGGACGAAA ACCAACCCGT 501 CGCCGCCAAC TATTCCGCCG AAGGCACGGA
TGTCGATTTC GGACGGCTGA 551 CGCGCCAGAT GGTGAAATAT TTGCAGGGCA
AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT CAAACGCGAA
TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA ACCCAGACTG
GCAGCTCACC CTCCGCACCC 701 GCTTCCTCTT CCTCGGCGCG GGCGGCGGCG
CACTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA AGGCTACGGC
GGCTTACCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC CCGAAACCGC
CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC GGCGCGCCGC
CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTAGACGG CAAACGACAC
CTTATGTTCG GTCCTTACGC 951 AGGTTTCCGT TCCAACTTCC TCAAGCAAGG
CTCGTTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC CTCTATCCTA
TGCTGCGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAATA CCTGCTGGGC
GAATTGCGTA AAACCAAAGA 1101 AGAACGCTtt gCCTCCCTGC TGgaatacta
cccGaggcag acccGACGAc 1151 tggtactcat cacgcaggnc acGCGTcata
tcattanata tgactCgaaa 1201 ctgcgcgtgc tgcagttgta cgagattgtg
ccaCGCGacg ctcgctcgcg 1251 cattctggag cgtcgcggcg catcacgctn
tgcgctgata tccgctgatg 1301 acactgctcc gaGCGcgccc gtcttggaaa
gtgtctga
This corresponds to the amino acid sequence <SEQ ID 692; ORF
165-1.ng>:
TABLE-US-00914 g165-1.pep 1 MAEATDVVLV GGGIMSATLG VLLKELEPSW
EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAD GVINPARALN
IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED HCRYLQKRYD
VFKTQKLFEN MEFSTDRNKI 151 SDWAPLIMRG RDENQPVAAN YSAEGTDVDF
GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA DTRNPDWQLT
LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GLPVSGLFFR NSNPETAEQH
NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR SNFLKQGSFM
DLPLSIHMDN LYPMLRAGWA 351 NMPLTKYLLG ELRKTKEERF ASLLEYYPRQ
TRRLVLITQX TRHIIXYDSK 401 LRVLQLYEIV PRDARSRILE RRGASRXALI
SADDTAPSAP VLESV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 693>:
TABLE-US-00915 m165-1.seq 1 ATGGCTGAAG CGACAGACGT TGTCTTGGTG
GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA AAGAACTCGA
ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAAGAT GTGGCGTTGG
AATCGTCAAA CGCGTGGAAC 151 AACGCCGGCA CGGGGCATTC CGCGCTGTGC
GAATTGAACT ATGCGCCGTT 201 GGGTGCAAAT GGGATTATCG ATCCGGCGCG
CGCCCTCAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG TTTTGGGCGA
CGCTGGTCGC GGAAGGCAAG 301 TTGGAAGACA ATTCCTTCAT CAATGCCGTG
CCGCATATGT CTTTGGTGAT 351 GAATGAAGAC CATTGTTCTT ATCTTCAAAA
ACGTTATGAC GCGTTTAAAA 401 CCCAAAAACT TTTTGAAAAT ATGGAATTTT
CCACCGATCG GAACAAAATT 451 TCCGATTGGG CTCCGCTGAT GATGCGCGGC
CGGGACGAAA ACCAACCCGT 501 CGCCGCCAAC TACTCCGCCG AAGGTACGGA
TGTCGATTTC GGACGGCTGA 551 CGCGCCAAAT GGTGAAATAT TTGCAGGGCA
AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT CAAACGCGAA
TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA ACCCCGACGG
GCAGCTCACC CTCCGTACCC 701 GCTTCCTCTT CCTCGGCGCG GGCGGCGGCG
CGCTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA AGGCTACGGC
GGCTTCCCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC CCGAAACCGC
CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC GGCGCGCCGC
CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTGGACGG CAAACGCCAC
CTTATGTTCG GCCCTTACGC 951 AGGCTTCCGT TCCAACTTCC TCAAGCAAGG
CTCGCTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC CTCTATCCTA
TGCTGTGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAATA CCTGCTGGGC
GAATTGCGTA AAACCAAAGA 1101 AGAACGCTTC GCCTCCCTGC TGGAATACTA
CCCCGAGGCA AACCCCGACG 1151 ACTGGGAACT CATCACCGCA GGGCAACGCG
TCCAAATCAT TAAAAAAGAC 1201 TCCGAAAAAG GCGGCGTGCT CCAGTTTGGT
ACGGAGATTG TCGCCCACGC 1251 CGACGGCTCA CTCGCCGCAT TGCTGGGCGC
GTCGCCGGGC GCATCGACCG 1301 CTGTGCCGCT GATGATCCGG CTGATGCACC
AATGCTTCCC CGAGCGCGCC 1351 CCGTCTTGGG AAGACCGTCT GAAAGAGCTG
GTACCGGGTT ACGGCATCAA 1401 GTTGAACGAA AACCCTGAAA GGGCGGATGA
AATTATCGCC TATACCGCGA 1451 AAGTATTGGA TATTTAA
This corresponds to the amino acid sequence <SEQ ID 694; ORF
165-1>:
TABLE-US-00916 m165-1.pep 1 MAEATDVVLV GGGIMSATLG VLLKELEPSW
EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAN GIIDPARALN
IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED HCSYLQKRYD
AFKTQKLFEN MEFSTDRNKI 151 SDWAPLMMRG RDENQPVAAN YSAEGTDVDF
GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA DTRNPDGQLT
LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GFPVSGLFFR NSNPETAEQH
NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR SNFLKQGSLM
DLPLSIHMDN LYPMLCAGWA 351 NMPLTKYLLG ELRKTKEERF ASLLEYYPEA
NPDDWELITA GQRVQIIKKD 401 SEKGGVLQFG TEIVAHADGS LAALLGASPG
ASTAVPLMIR LMHQCFPERA 451 PSWEDRLKEL VPGYGIKLNE NPERADEIIA
YTAKVLDI* m165-1/g165-1 89.7% identity in 428 aa overlap 10 20 30
40 50 60 m165-1.pep
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g165-1
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC 10 20
30 40 50 60 70 80 90 100 110 120 m165-1.pep
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED
|||||||||:|:|:|||||||||||||||||||||||||||||||||||||||||||||| g165-1
ELNYAPLGADGVINPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED 70 80
90 100 110 120 130 140 150 160 170 180 m165-1.pep
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF ||
|||||||:|||||||||||||||||||||||||:||||||||||||||||||||||| g165-1
HCRYLQKRYDVFKTQKLFENMEFSTDRNKISDWAPLIMRGRDENQPVAANYSAEGTDVDF 130
140 150 160 170 180 190 200 210 220 230 240 m165-1.pep
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| g165-1
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDWQLTLRTRFLFLGA 190
200 210 220 230 240 250 260 270 280 290 300 m165-1.pep
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g165-1
GGGALTLLQKSGIPEGKGYGGLPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL 250
260 270 280 290 300 310 320 330 340 350 360 m165-1.pep
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLCAGWANMPLTKYLLG
||||||||||||||||||||||||||||:|||||||||||||||| |||||||||||||| g165-1
DTRNVDGKRHLMFGPYAGFRSNFLKQGSFMDLPLSIHMDNLYPMLRAGWANMPLTKYLLG 310
320 330 340 350 360 370 380 390 400 410 420 m165-1.pep
ELRKTKEERFASLLEYYPEANPDDWELITAGQRVQIIKKDSEKGGVLQFGTEIVAHADGS
||||||||||||||||||: : ||| | :|| || | |||:|||: | : g165-1
ELRKTKEERFASLLEYYPR-QTRRLVLITQXTR-HIIXYDS-KLRVLQLYEIVPRDARSR 370
380 390 400 410 430 440 450 460 470 480 m165-1.pep
LAALLGASPGASTAVPLMIRLMHQCFPERAPSWEDRLKELVPGYGIKLNENPERADEIIA : |||
g165-1 ILERRGASRXALISADDTAPSAPVLESVX 420 430 440
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 695>:
TABLE-US-00917 a165-1.seq 1 ATGGCTGAAG CGACAGACGT TGTCTTGGTG
GGCGGCGGCA TTATGAGCGC 51 GACTTTGGGC GTTTTGCTCA AAGAACTCGA
ACCGTCTTGG GAAATCACCC 101 TGATTGAACG CTTGGAAGAT GTGGCGTTGG
AATCGTCAAA CGCGTGGAAC 151 AACGCCGGCA CGGGGCATTC CGCGCTGTGC
GAATTGAACT ATGCGCCGTT 201 GGGTGCAAAT GGGATTATCG ATCCGGCGCG
CGCCCTCAAT ATTGCCGAAC 251 AGTTTCATGT CAGCCGCCAG TTTTGGGCGA
CGTTGGTCGC GGAAGGCAAG 301 TTGGAAGACA ATTCCTTCAT CAATGCCGTG
CCGCATATGT CTTTGGTGAT 351 GAATGAAGAC CATTGTTCTT ATCTTCAAAA
ACGTTATGAC GCGTTTAAAA 401 CCCAAAAACT TTTTGAAAAT ATGGAATTTT
CCACCGATCG GAACAAAATT 451 TCCGATTGGG CTCCGCTGAT GATGCGCGGC
CGGGACGAAA ACCAACCCGT 501 CGCCGCCAAC TACTCCGCCG AAGGCACGGA
TGTCGATTTC GGACGGCTGA 551 CGCGCCAAAT GGTGAAATAT TTGCAGGGCA
AGGGCGTAAA AACCGAGTTC 601 AACCGCCACG TCGAAGACAT CAAACGCGAA
TCCGACGGCG CGTGGGTGCT 651 CAAAACCGCC GATACCCGCA ACCCCGACGG
GCAGCTCACC CTCCGTACCC 701 GCTTCCTCTT CCTCGGCGCG GGCGGCGGCG
CGCTGACCCT GCTGCAAAAA 751 TCCGGCATCC CCGAAGGCAA AGGCTACGGT
GGCTTTCCCG TGTCCGGCCT 801 GTTCTTCCGC AACAGCAACC CCGAAACCGC
CGAACAACAC AACGCCAAAG 851 TGTACGGGCA GGCTTCCGTC GGCGCGCCGC
CGATGTCCGT CCCGCACCTC 901 GACACACGCA ACGTGGACGG CAAACGCCAC
CTTATGTTCG GCCCTTACGC 951 AGGCTTCCGT TCCAACTTCC TCAAGCAAGG
CTCACTTATG GATTTGCCGC 1001 TGTCCATCCA TATGGACAAC CTCTATCCTA
TGCTGCGCGC CGGCTGGGCG 1051 AATATGCCGC TGACCAAATA CCTGCTGGGC
GAATTGCGTA AAACCAAAGA 1101 AGAACGCTTC GCCTCCCTGC TGGAATACTA
CCCCGAGGCA AACCCCGACG 1151 ACTGGGAACT CATCACCGCA GGGCAACGCG
TTCAAATCAT TAAAAAAGAC 1201 TCCGAAAAAG GCGGCGTGTT GCAGTTTGGT
ACGGAGATTG TCGCACACGC 1251 CGACGGCTCG CTCGCCGCAT TGCTGGGCGC
GTCGCCGGGC GCATCGACCG 1301 CCGTGCCGCT GATGATCCGG CTGATGCACC
AATGCTTCCC CGAACGCACC 1351 CCGTCTTGGG AAGGCCGTCT GAAAGAGCTG
GTACCGGGTT ACGGCATCAA 1401 GTTGAACGAA AACCCCGAAA GGGCGGATGA
AATTATCGCC TATACCGCGA 1451 AAGTGTTGGA TATTTAA
This corresponds to the amino acid sequence <SEQ ID 696; ORF
165-1.a>:
TABLE-US-00918 a165-1.pep 1 MAEATDVVLV GGGIMSATLG VLLKELEPSW
EITLIERLED VALESSNAWN 51 NAGTGHSALC ELNYAPLGAN GIIDPARALN
IAEQFHVSRQ FWATLVAEGK 101 LEDNSFINAV PHMSLVMNED HCSYLQKRYD
AFKTQKLFEN MEFSTDRNKI 151 SDWAPLMMRG RDENQPVAAN YSAEGTDVDF
GRLTRQMVKY LQGKGVKTEF 201 NRHVEDIKRE SDGAWVLKTA DTRNPDGQLT
LRTRFLFLGA GGGALTLLQK 251 SGIPEGKGYG GFPVSGLFFR NSNPETAEQH
NAKVYGQASV GAPPMSVPHL 301 DTRNVDGKRH LMFGPYAGFR SNFLKQGSLM
DLPLSIHMDN LYPMLRAGWA 351 NMPLTKYLLG ELRKTKEERF ASLLEYYPEA
NPDDWELITA GQRVQIIKKD 401 SEKGGVLQFG TEIVAHADGS LAALLGASPG
ASTAVPLMIR LMHQCFPERT 451 PSWEGRLKEL VPGYGIKLNE NPERADEIIA
YTAKVLDI* a165-1/m165-1 99.4% identity in 488 aa overlap 10 20 30
40 50 60 a165-1.pep
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC 10 20
30 40 50 60 70 80 90 100 110 120 a165-1.pep
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
ELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLEDNSFINAVPHMSLVMNED 70 80
90 100 110 120 130 140 150 160 170 180 a165-1.pep
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
HCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDF 130
140 150 160 170 180 190 200 210 220 230 240 a165-1.pep
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
GRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTLRTRFLFLGA 190
200 210 220 230 240 250 260 270 280 290 300 a165-1.pep
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL 250
260 270 280 290 300 310 320 330 340 350 360 a165-1.pep
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLRAGWANMPLTKYLLG
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| m165-1
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLCAGWANMPLTKYLLG 310
320 330 340 350 360 370 380 390 400 410 420 a165-1.pep
ELRKTKEERFASLLEYYPEANPDDWELITAGQRVQIIKKDSEKGGVLQFGTEIVAHADGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m165-1
ELRKTKEERFASLLEYYPEANPDDWELITAGQRVQIIKKDSEKGGVLQFGTEIVAHADGS 370
380 390 400 410 420 430 440 450 460 470 480 a165-1.pep
LAALLGASPGASTAVPLMIRLMHQCFPERTPSWEGRLKELVPGYGIKLNENPERADEIIA
|||||||||||||||||||||||||||||:|||| ||||||||||||||||||||||||| m165-1
LAALLGASPGASTAVPLMIRLMHQCFPERAPSWEDRLKELVPGYGIKLNENPERADEIIA 430
440 450 460 470 480 489 a165-1.pep YTAKVLDIX ||||||||| m165-1
YTAKVLDIX a165-1/p33940 sp|P33940|YOJH_ECOLI HYPOTHETICAL 60.2 KD
PROTEIN IN ECO-ALKB INTERGENIC REGION
>gi|1736851|gnl|PID|d1016718 (D90850) ORF_ID: o372#5; similar to
[SwissProt Accession Number P33940] [Escherichia coli]
>gi|1788539 (AE000310) f548; This 548 aa ORF is 100 pct
identical to 490 residues of YOJH_ECOLI SW: P33940 (492 aa) but
contains 56 additional N-ter aa; 100 pct identical to GB:
ECOHU49_33 ACCESSION: U00008 (490 aa) but contains 58 aditional
N-term resi... Length = 548 Score = 458 bits (1167), Expect = e-128
Identities = 233/490 (47%), Positives = 303/490 (61%), Gaps = 5/490
(1%) Query: 3
EATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALCEL 62 +
TDV+L+GGGIMSATLG L+ELEP W +T++ERLE VA ESSN WNNAGTGHSAL EL Sbjct: 30
QETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMEL 89
Query: 63
NYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLED-NSFINAVPHMSLVMNEDH 121 NY
P A+G I +A+ I E F +SRQFWA V G L SFIN VPHMS V ED+ Sbjct: 90
NYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDN 149
Query: 122
CSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRGRDENQPVAANYSAEGTDVDFG 181
++L+ RY A + LF M +S D +I +WAPL+M GRD Q VAA + GTDV++G Sbjct: 150
VNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYG 209
Query: 182
RLTRQMVKYLQGKG-VKTEFNRHVEDIKRESDGAWVLKTADTRNPDGQLTXXXXXXXXXX 240
+TRQ++ LQ K + + V +KR D W + AD +N Q Sbjct: 210
EITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQ-NIRAKFVFIGA 268
Query: 241
XXXXXXXXQKSGIPEGKGYGGFPVSGLFFRNSNPETAEQHNAKVYGQASVGAPPMSVPHL 300
Q+SGIPE K Y GFPV G F + NP+ H AKVYG+ASVGAPPMSVPH+ Sbjct: 269
GGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHI 328
Query: 301
DTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPLSIHMDNLYPMLRAGWANMPLTKYLLG 360
DTR +DGKR ++FGP+A F + FLK GSL DL S N+ PM+ G N L KYL+ Sbjct: 329
DTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVS 388
Query: 361
ELRKTKEERFASLLEYYPEANPDDWELITAGQRVQIIKKDSEKGGVLQFGTEIVXXXXXX 420 ++
++E+RF +L EYYP+A +DW L AGQRVQIIK+D+EKGGVL+ GTE+V Sbjct: 389
QVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGT 448
Query: 421
XXXXXXXXXXXXXXVPLMIRLMHQCFPER--TPSWEGRLKELVPGYGIKLNENPERADEI 478
P+M+ L+ + F +R +P W+ LK +VP YG KLN + + Sbjct: 449
IAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE 508
Query: 479 IAYTAKVLDI 488 + YT++VL + Sbjct: 509 LQYTSEVLGL 518
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 697>:
TABLE-US-00919 g204.seq 1 atggcggcgg cggaaataaa acgccccctc
gctgtcgatt tccagcacat 51 agcgtccgtt ctgcacggcg gcatagccgc
ttttgcctgc ctgatagggt 101 tgcagggcgg aatgcgaaat caggtaatca
gtcagtttgc cgccgtcttc 151 ggcgatattg cccaccagtt tggcaaacaa
ggtatggcac acgccgtttt 201 ccgcccagcc cgaaggcgcg tcctttccgt
cggtttccat acatttgccg 251 acgacggctt ccaagtcgtt gggatgcttt
ccggtcagcc ggacggcgtt 301 ttgttccggc aagcctttaa tcggataact
gatttgtttt ttgccgtcgt 351 tggttttgcc ttcgctactt tgtcccaaag
ccaaaccggc aatcgccgta 401 ttgtcgatgt atttgacttt gaaaaccggt
ttcggcgcgc tttgtgccgc 451 attttgcggc tgttccgccg tattttcgga
tttgccgcag gcggcaagca 501 gcaggcagcc gcccaacacg gcaaaaggta
ttttcagcat tccgcactcc 551 tgatggtttc aaaatgccgt ctgaaatgcc
gtctgaaacg tggcaggcgg 601 aggttcggac ggcattgggt ttatttcaac
gggcggatgc cgaccgcatc 651 gcgtacttta tccaacaatt cgcgcgcttc
tttgcgcgct ttttgcgcgc 701 ctgcctgcaa aatctcttcg atttgcgaag
gattagaggt caatgcgttg 751 tag
This corresponds to the amino acid sequence <SEQ ID 698; ORF
204.ng>:
TABLE-US-00920 g204.pep 1 MAAAEIKRPL AVDFQHIASV LHGGIAAFAC
LIGLQGGMRN QVISQFAAVF 51 GDIAHQFGKQ GMAHAVFRPA RRRVLSVGFH
TFADDGFQVV GMLSGQPDGV 101 LFRQAFNRIT DLFFAVVGFA FATLSQSQTG
NRRIVDVFDF ENRFRRALCR 151 ILRLFRRIFG FAAGGKQQAA AQHGKRYFQH
SALLMVSKCR LKCRLKRGRR 201 RFGRHWVYFN GRMPTASRTL SNNSRASLRA
FCAPACKISS ICEGLEVNAL 251 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 699>:
TABLE-US-00921 m204.seq 1 ATGGCGGCGG CGGAAATAAA ACGCCCCTTC
GCTGTCGATT TCCAGCACAT 51 AGCGTCCGTT CTGCACGGCG GCATAGCCGC
TTTTGCCTGC CTGATAGGGT 101 TGCAGGGCGG CATGCGAAAC TAGGTAATCC
GTCAGTTTGC CGCCGTCTTC 151 GGCGATATTG CCCACCAGTT TGGCAAACAA
GGTATGGCAC ACGCCGTTTT 201 CTGCCCAACC TGCCGGACTG TCCTTATCAT
CGGTTTCCAT ACATTTGCCG 251 CTGACGGCTT CCAAGTCGCC GGGATGCTTG
CCGATCAGTC GGATAACATT 301 TTGTTCCGGC AAGCCTTTAA TCGGATAACT
GATTTGTTTT TTGCCGTCGT 351 TGGTTTTGCC TTCGCTGCTT TGTCCCAAAT
CCAAACCGGC AATCGCCGTA 401 TTGTCGATAT ATATGACTTT GAAAACCGGT
TTCGGCGCGC TTTGTACCGC 451 GTTTTGCGGC TGTACCGCCG TATTTwCGGA
TTTGCCGCaC GGCaArGCAG 501 CAGGCAGCCG CCCAATACGG CAAAArAwGT
wTTCAGCATT CCACAyTCCT 551 GATGGTTTCA AAATGCCGTC TGAAACGCGG
CAGGCGGAGG TTCGGACGGC 601 ATCGGGTTCA TTTCAACGGG CGGATGcCGA
CCGCATCgGT ACTTTGTCCA 651 ATAATTCGCG TGCTTCTTTA CGCGCTTTCG
CCGCGCCTGC CTGCAAAATC 701 TCTTCGATTT GCGAAGGGTC GGCGGTCAGC
TCGTTGTAG
This corresponds to the amino acid sequence <SEQ ID 700; ORF
204>:
TABLE-US-00922 m204.pep 1 MAAAEIKRPF AVDFQHIASV LHGGIAAFAC
LIGLQGGMRN *VIRQFAAVF 51 GDIAHQFGKQ GMAHAVFCPT CRTVLIIGFH
TFAADGFQVA GMLADQSDNI 101 LFRQAFNRIT DLFFAVVGFA FAALSQIQTG
NRRIVDIYDF ENRFRRALYR 151 VLRLYRRIXG FAATAXQQAA AQYGKXXXQH
STXLMVSKCR LKRGRRRFGR 201 HRVHFNGRMP TASGTLSNNS RASLRAFAAP
ACKISSICEG SAVSSL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 204
shows 82.0% identity over a 250 aa overlap with a predicted ORF
(ORF 204.ng) from N. gonorrhoeae:
TABLE-US-00923 m204/g204 10 20 30 40 50 60 m204.pep
MAAAEIKRPFAVDFQHIASVLHGGIAAFACLIGLQGGMRNXVIRQFAAVFGDIAHQFGKQ
|||||||||:|||||||||||||||||||||||||||||| || |||||||||||||||| g204
MAAAEIKRPLAVDFQHIASVLHGGIAAFACLIGLQGGMRNQVISQFAAVFGDIAHQFGKQ 10 20
30 40 50 60 70 80 90 100 110 120 m204.pep
GMAHAVFCPTCRTVLIIGFHTFAADGFQVAGMLADQSDNILFRQAFNRITDLFFAVVGFA
||||||| |: | || :|||||| |||||:|||: | |::|||||||||||||||||||| g204
GMAHAVFRPARRRVLSVGFHTFADDGFQVVGMLSGQPDGVLFRQAFNRITDLFFAVVGFA 70 80
90 100 110 120 130 140 150 160 170 180 m204.pep
FAALSQIQTGNRRIVDIYDFENRFRRALYRVLRLYRRIXGFAATAXQQAAAQYGKXXXQH ||:|||
|||||||||::|||||||||| |:|||:||| |||| : ||||||:|| || g204
FATLSQSQTGNRRIVDVFDFENRFRRALCRILRLFRRIFGFAAGGKQQAAAQHGKRYFQH 130
140 150 160 170 180 190 200 210 220 230 m204.pep
STXLMVSKCRLK----RGRRRFGRHRVHFNGRMPTASGTLSNNSRASLRAFAAPACKISS |:
||||||||| ||||||||| |:||||||||| ||||||||||||| |||||||| g204
SALLMVSKCRLKCRLKRGRRRFGRHWVYFNGRMPTASRTLSNNSRASLRAFCAPACKISS 190
200 210 220 230 240 240 m204.pep ICEGSAVSSL X |||| |::| g204
ICEGLEVNAL 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 701>:
TABLE-US-00924 a204.seq 1 ATGGCGGCGG CGGAAATAAA ACGCCCCCTC
GCTGTCGATT TCCAGCACAT 51 AGCGTCCGTT CTGCACGGCG GCATAGCCGC
TTTTGCCTGC CTGATAGGGT 101 TGCAGGGCGG AATGCGAAAT CAGGTAATCC
GTCAGTTTGC CGCCGTCTTC 151 GGCGATATTG CCCACCAGTT TGGCAAACAA
GGTATGGCAC ACGCCGTTTG 201 CCGCCCAGCC CGAAGGCGCG CCCTTTCCGT
CGGTTTCCAT ACATTTGCCG 251 ACGACGGCTT CCAAGTCGTT GGGATGCTTG
CCGGTCAGCC GGACGACGTT 301 TTGTTCCGGC AAGCCTTT.. ..........
.......... .......... 351 .......... .......... ..........
.......... .......... 401 .......... .......... ..........
.......... .......... 451 .......... .......... ..........
.......... .......... 501 .......... .......... ..........
.......... .......... 551 .......... .......... ..........
.....AAGAG GTTCGGACGG 601 CATTGGGTTT ATTTCAACGG GCGGATACCG
ACCGCATCAC GTACTTTGCC 651 CAATAATTCG CGTGCTTCTT TACGCGCTTT
TTGCGCGCCT GCCTGCAAAA 701 TCTCTTCGAT TTGCGAAGGG TCGGCGGTCA
GCTCGTTGTA G
This corresponds to the amino acid sequence <SEQ ID 702; ORF
204.a>:
TABLE-US-00925 a204.pep 1 MAAAEIKRPL AVDFQHIASV LHGGIAAFAC
LIGLQGGMRN QVIRQFAAVF 51 GDIAHQFGKQ GMAHAVCRPA RRRALSVGFH
TFADDGFQVV GMLAGQPDDV 101 LFRQAF.... .......... ..........
.......... .......... 151 .......... .......... ..........
.......... .....KRFGR 201 HWVYFNGRIP TASRTLPNNS RASLRAFCAP
ACKISSICEG SAVSSL* m204/a204 54.5% identity in 246 aa overlap 10 20
30 40 50 60 m204.pep
MAAAEIKRPFAVDFQHIASVLHGGIAAFACLIGLQGGMRNXVIRQFAAVFGDIAHQFGKQ
|||||||||:|||||||||||||||||||||||||||||| ||||||||||||||||||| a204
MAAAEIKRPLAVDFQHIASVLHGGIAAFACLIGLQGGMRNQVIRQFAAVFGDIAHQFGKQ 10 20
30 40 50 60 70 80 90 100 110 120 m204.pep
GMAHAVFCPTCRTVLIIGFHTFAADGFQVAGMLADQSDNILFRQAFNRILDLFFAVVGFA ||||||
|: | :| :|||||| |||||:|||| | |::|||||| a204
GMAHAVCRPARRRALSVGFHTFADDGFQVVGMLAGQPDDVLFRQAF-------------- 70 80
90 100 130 140 150 160 170 180 m204.pep
FAALSQIQTGNRRIVDIYDFENRFRRALYRVLRLYRRIXGFAATAXQQAAAQYGKXXXQH a204
------------------------------------------------------------ 190
200 210 220 230 240 m204.pep
STXLMVSKCRLKRGRRRFGRHRVHFNGRMPTASGTLSNNSRASLRAFAAPACKISSICEG :|||||
|:||||:|||| ||||||||||||| |||||||||||| a204
---------------KRFGRHWVYFNGRIPTASRTLPNNSRASLRAFCAPACKISSICEG 110
120 130 140 150 m204.pep SAVSSLX ||||||| a204 SAVSSLX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 703>:
TABLE-US-00926 g205.seq 1 atgctgaaaa taccttttgc cgtgttgggc
ggctgcctgc tgcttgccgc 51 ctgcggcaaa tccgaaaata cggcggaaca
gccgcaaaat gcggcacaaa 101 gcgcgccgaa accggttttc aaagtcaaat
acatcgacaa tacggcgatt 151 gccggtttgg ctttgggaca aagtagcgaa
ggcaaaacca acgacggcaa 201 aaaacaaatc agttatccga ttaaaggctt
gccggaacaa aacgccgtcc 251 ggctgaccgg aaagcatccc aacgacttgg
aagccgtcgt cggcaaatgt 301 atggaaaccg acggaaagga cgcgccttcg
ggctgggcgg aaaacggcgt 351 gtgccatacc ttgtttgcca aactggtggg
caatatcgcc gaagacggcg 401 gcaaactgac tgattacctg atttcgcatt
ccgccctgca accctatcag 451 gcaggcaaaa gcggctatgc cgccgtgcag
aacggacgct atgtgctgga 501 aatcgacagc gagggggcgt tttatttccg
ccgccgccat tattga
This corresponds to the amino acid sequence <SEQ ID 704; ORF
205.ng>:
TABLE-US-00927 g205.pep 1 MLKIPFAVLG GCLLLAACGK SENTAEQPQN
AAQSAPKPVF KVKYIDNTAI 51 AGLALGQSSE GKTNDGKKQI SYPIKGLPEQ
NAVRLTGKHP NDLEAVVGKC 101 METDGKDAPS GWAENGVCHT LFAKLVGNIA
EDGGKLTDYL ISHSALQPYQ 151 AGKSGYAAVQ NGRYVLEIDS EGAFYFRRRH Y
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 705>:
TABLE-US-00928 m205.seq 1 ATGCTGAAwA CwTyTTTTGC CGTATTGGGC
GGCTGCCTGC TGCyTtGCCG 51 tGCGGCAAAT CCGwAAATAC GGCGGTACAG
CCGCAAAACG CGGTACAAAG 101 CGCGCCGAAA CCGGTTTTCA AAGTCATATA
TATCGACAAT ACGGCGATTG 151 CCGGTTTGGA TTTGGGACAA AGCAGCGAAG
GCAAAACCAA CGACGGCAAA 201 AAACAAATCA GTTATCCGAT TAAAGGCTTG
CCGGAACAAA ATGTTATCCG 251 ACTGATCGGC AAGCATCCCG GCGACTTGGA
AGCCGTCAGC GGCAAATGTA 301 TGGAAACCGA TGATAAGGAC AGTCCGGCAG
GTTGGGCAGA AAACGGCGTG 351 TGCCATACCT TGTTTGCCAA ACTGGTGGGC
AATATCGCCG AAGACGGCGG 401 CAAACTGACG GATTACCTAG TTTCGCATGC
CGCCCTGCAA CCCTATCAGG 451 CAGGCAAAAG CGGCTATGCC GCCGTGCAGA
ACGGACGCTA TGTGCTGGAA 501 ATCGACAGCG AAGGGGCGTT TTATTTCCGC
CGCCGCCATT ATTGA
This corresponds to the amino acid sequence <SEQ ID 706; ORF
205>:
TABLE-US-00929 m205.pep 1 MLXTXFAVLG GCLLXCRCGK SXNTAVQPQN
AVQSAPKPVF KVIYIDNTAI 51 AGLDLGQSSE GKTNDGKKQI SYPIKGLPEQ
NVIRLIGKHP GDLEAVSGKC 101 METDDKDSPA GWAENGVCHT LFAKLVGNIA
EDGGKLTDYL VSHAALQPYQ 151 AGKSGYAAVQ NGRYVLEIDS EGAFYFRRRH Y*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 205
shows 88.4% identity over a 181 aa overlap with a predicted ORF
(ORF 205.ng) from N. gonorrhoeae:
TABLE-US-00930 m205/g205 10 20 30 40 50 60 m205.pep
MLXTXFAVLGGCLLXCRCGKSXNTAVQPQNAVQSAPKPVFKVIYIDNTAIAGLDLGQSSE II
||||||||| |||| ||| |||||:|||||||||| |||||||||| |||||| g205
MLKIPFAVLGGCLLLAACGKSENTAEQPQNAAQSAPKPVFKVKYIDNTAIAGLALGQSSE 10 20
30 40 50 60 70 80 90 100 110 120 m205.pep
GKTNDGKKQISYPIKGLPEQNVIRLIGKHPGDLEAVSGKCMETDDKDSPAGWAENGVCHT
|||||||||||||||||||||::|| ||||:||||| ||||||| ||:|:|||||||||| g205
GKTNDGKKQISYPIKGLPEQNAVRLTGKHPNDLEAVVGKCMETDGKDAPSGWAENGVCHT 70 80
90 100 110 120 130 140 150 160 170 180 m205.pep
LFAKLVGNIAEDGGKLTDYLVSHAALQPYQAGKSGYAAVQNGRYVLEIDSEGAFYFRRRH
||||||||||||||||||||:||:|||||||||||||||||||||||||||||||||||| g205
LFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDSEGAFYFRRRH 130
140 150 160 170 180 m205.pep YX | g205 Y
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 707>:
TABLE-US-00931 a205.seq (partial) 1 TCCGAACCTC TTAAAGGCTT
GCCGGAACAA AACGTCGTCC GGCTGACCGG 51 CAAGCATCCC AACGACTTGG
AAGCCGTCGT CGGCAAATGT ATGGAAACCG 101 ACGGAAAGGG CGCGCCTTCG
GGCTGGGCGG CAAACGGCGT GTGCCATACC 151 TTGTTTGCCA AACTGGTGGG
CAATATCGCC GAAGACGGCG GCAAACTGAC 201 GGATTACCTG ATTTCGCATT
CCGCCCTGCA ACCCTATCAG GCAGGCAAAA 251 GCGGCTATGC CGCCGTGCAG
AACGGACGCT ATGTGCTGGA AATCGACAGC 301 GAGGGGGCGT TTTATTTCCG
CCGCCGCCAT TATTGA
This corresponds to the amino acid sequence <SEQ ID 708; ORF
205.a>:
TABLE-US-00932 a205.pep (partial) 1 SEPLKGLPEQ NVVRLTGKHP
NDLEAVVGKC METDGKGAPS GWAANGVCHT 51 LFAKLVGNIA EDGGKLTDYL
ISHSALQPYQ AGKSGYAAVQ NGRYVLEIDS 101 EGAFYFRRRH Y* m205/a205 88.3%
identity in 111 aa overlap 50 60 70 80 90 100 m205.pep
KVIYIDNTAIAGLDLGQSSEGKTNDGKKQISYPIKGLPEQNVIRLIGKHPGDLEAVSGKC |
|:||||||||:|| ||||:||||| ||| a205 SEPLKGLPEQNVVRLTGKHPNDLEAVVGKC 10
20 30 110 120 130 140 150 160 m205.pep
METDDKDSPAGWAENGVCHTLFAKLVGNIAEDGGKLTDYLVSHAALQPYQAGKSGYAAVQ |||| |
:|:||| ||||||||||||||||||||||||||:||:|||||||||||||||| a205
METDGKGAPSGWAANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ 40 50
60 70 80 90 170 180 m205.pep NGRYVLEIDSEGAFYFRRRHYX
|||||||||||||||||||||| a205 NGRYVLEIDSEGAFYFRRRHYX 100 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 709>:
TABLE-US-00933 g205-1.seq (partial) 1 ATGCTGAAAA TAcCTTTTGC
CGTGTTGGGC GGCTGCCTGC TGCTTGCCGC 51 CTGCGGCAAA TCCGAAAATA
CGGCGGAACA GCCGCAAAAT GCGGCACAAA 101 GCGCGCCGAA ACCGGTTTTC
AAAGTCAAAT ACATCGACAA TACGGCGATT 151 GCCGGTTTGG CTTTGGGACA
AAGTAGCGAA GGCAAAACCA ACGACGGCAA 201 AAAACAAATC AGTTATCCGA
TTAAAGGCTT GCCGGAACAA AACGCCGTCC 251 GGCTGACCGG AAAGCATCCC
AACGACTTGG AAGCCGTCGT CGGCAAATGT 301 ATGGAAACCG ACGGAAAGGA
CGCGCCTTCG GGCTGGGCGG AAAACGGCGT 351 GTGCCATACC TTGTTTGCCA
AACTGGTGGG CAATATCGCC GAAGACGGCG 401 GCAAACTGAC TGATTACCTG
ATTTCGCATT CCGCCCTGCA ACCCTATCAG 451 GCAGGCAAAA GCGGCTATGC
CGCCGTGCAG AACGGACGCT ATGTGCTGGA 501 AATCGACAGC GAGGGGGCGT TTTA
This corresponds to the amino acid sequence <SEQ ID 710; ORF
205-1.ng>:
TABLE-US-00934 g205-1.pep (partial). 1 MLKIPFAVLG GCLLLAACGK
SENTAEQPQN AAQSAPKPVF KVKYIDNTAI 51 AGLALGQSSE GKTNDGKKQI
SYPIKGLPEQ NAVRLTGKHP NDLEAVVGKC 101 METDGKDAPS GWAENGVCHT
LFAKLVGNIA EDGGKLTDYL ISHSALQPYQ 151 AGKSGYAAVQ NGRYVLEIDS EGAF
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 711>:
TABLE-US-00935 m205-1.seq.. 1 ATGCTGAAAA CATCTTTTGC CGTATTGGGC
GGCTGCCTGC TGCTTGCCGC 51 CTGCGGCAAA TCCGAAAATA CGGCGGAACA
GCCGCAAAAC GCGGTACAAA 101 GCGCGCCGAA ACCGGTTTTC AAAGTCAAAT
ATATCGACAA TACGGCGATT 151 GCCGGTTTGG ATTTGGGACA AAGCAGCGAA
GGCAAAACCA ACGACGGCAA 201 AAAACAAATC AGTTATCCGA TTAAAGGCTT
GCCGGAACAA AATGTTATCC 251 GACTGATCGG CAAGCATCCC GGCGACTTGG
AAGCCGTCAG CGGCAAATGT 301 ATGGAAACCG ATGATAAGGA CAGTCCGGCA
GGTTGGGCAG AAAACGGCGT 351 GTGCCATACC TTGTTTGCCA AACTGGTGGG
CAATATCGCC GAAGACGGCG 401 GCAAACTGAC GGATTACCTA GTTTCGCATG
CCGCCCTGCA ACCCTATCAG 451 GCAGGCAAAA GCGGCTATGC CGCCGTGCAG
AACGGACGCT ATGTGCTGGA 501 AATCGACAGC GAAGGGGCGT TTTATTTCCG
CCGCCGCCAT TATTGA
This corresponds to the amino acid sequence <SEQ ID 712; ORF
205-1>:
TABLE-US-00936 m205-1.pep 1 MLKTSFAVLG GCLLLAACGK SENTAEQPQN
AVQSAPKPVF KVKYIDNTAI 51 AGLDLGQSSE GKTNDGKKQI SYPIKGLPEQ
NVIRLIGKHP GDLEAVSGKC 101 METDDKDSPA GWAENGVCHT LFAKLVGNIA
EDGGKLTDYL VSHAALQPYQ 151 AGKSGYAAVQ NGRYVLEIDS EGAFYFRRRH Y*
m205-1/g205-1 92.0% identity in 174 aa overlap 10 20 30 40 50 60
g205-1.pep
MLKIPFAVLGGCLLLAACGKSENTAEQPQNAAQSAPKPVFKVKYIDNTAIAGLALGQSSE |||
||||||||||||||||||||||||||:||||||||||||||||||||| |||||| m205-1
MLKTSFAVLGGCLLLAACGKSENTAEQPQNAVQSAPKPVFKVKYIDNTAIAGLDLGQSSE 10 20
30 40 50 60 70 80 90 100 110 120 g205-1.pep
GKTNDGKKQISYPIKGLPEQNAVRLTGKHPNDLEAVVGKCMETDGKDAPSGWAENGVCHT
|||||||||||||||||||||::|| ||||:||||| ||||||| ||:|:|||||||||| m205-1
GKTNDGKKQISYPIKGLPEQNVIRLIGKHPGDLEAVSGKCMETDDKDSPAGWAENGVCHT 70 80
90 100 110 120 130 140 150 160 170 g205-1.pep
LFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDSEGAF
||||||||||||||||||||:||:|||||||||||||||||||||||||||||| m205-1
LFAKLVGNIAEDGGKLTDYLVSHAALQPYQAGKSGYAAVQNGRYVLEIDSEGAFYFRRRH 130
140 150 160 170 180 m205-1 YX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 713>:
TABLE-US-00937 a205-1.seq (partial) 1 CCTCTTAAAG GCTTGCCGGA
ACAAAACGTC GTCCGGCTGA CCGGCAAGCA 51 TCCCAACGAC TTGGAAGCCG
TCGTCGGCAA ATGTATGGAA ACCGACGGAA 101 AGGGCGCGCC TTCGGGCTGG
GCGGCAAACG GCGTGTGCCA TACCTTGTTT 151 GCCAAACTGG TGGGCAATAT
CGCCGAAGAC GGCGGCAAAC TGACGGATTA 201 CCTGATTTCG CATTCCGCCC
TGCAACCCTA TCAGGCAGGC AAAAGCGGCT 251 ATGCCGCCGT GCAGAACGGA
CGCTATGTGC TGGAAATCGA CAGCGAGGGG 301 GCGTTTTATT TCCGCCGCCG
CCATTATTGA
This corresponds to the amino acid sequence <SEQ ID 714; ORF
205-1.a>:
TABLE-US-00938 a205-1.pep (partial) 1 PLKGLPEQNV VRLTGKHPND
LEAVVGKCME TDGKGAPSGW AANGVCHTLF 51 AKLVGNIAED GGKLTDYLIS
HSALQPYQAG KSGYAAVQNG RYVLEIDSEG 101 AFYFRRRHY* m205-1/a205-1 89.0%
identity in 109 aa overlap 50 60 70 80 90 100 m205-1.pep
KYIDNTAIAGLDLGQSSEGKTNDGKKQISYPIKGLPEQNVIRLIGKHPGDLEAVSGKCME
|:||||||||:|| ||||:||||| ||||| a205-1
PLKGLPEQNVVRLTGKHPNDLEAVVGKCME 10 20 30 110 120 130 140 150 160
m205-1.pep
TDDKDSPAGWAENGVCHTLFAKLVGNIAEDGGKLTDYLVSHAALQPYQAGKSGYAAVQNG || |
:|:||| ||||||||||||||||||||||||||:||:|||||||||||||||||| a205-1
TDGKGAPSGWAANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNG 40 50
60 70 80 90 170 180 m205-1.pep RYVLEIDSEGAFYFRRRHYX
|||||||||||||||||||| a205-1 RYVLEIDSEGAFYFRRRHYX 100 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 715>:
TABLE-US-00939 g206.seq 1 atgttttccc ccgacaaaac ccttttcctc
tgtctcggcg cactgctcct 51 cgcctcatgc ggcacgacct ccggcaaaca
ccgccaaccg aaacccaaac 101 agacagtccg gcaaatccaa gccgtccgca
tcagccacat cggccgcaca 151 caaggctcgc aggaactcat gctccacagc
ctcggactca tcggcacgcc 201 ctacaaatgg ggcggcagca gcaccgcaac
cggcttcgac tgcagcggca 251 tgattcaatt ggtttacaaa aacgccctca
acgtcaagct gccgcgcacc 301 gcccgcgaca tggcggcggc aagccgcaaa
atccccgaca gccgcctcaa 351 ggccggcgac atcgtattct tcaacaccgg
cggcgcacac cgctactcac 401 acgtcggact ctacatcggc aacggcgaat
tcatccatgc ccccggcagc 451 ggcaaaacca tcaaaaccga aaaactctcc
acaccgtttt acgccaaaaa 501 ctaccttgga gcgcatacgt tttttacaga atga
This corresponds to the amino acid sequence <SEQ ID 716; ORF
206.ng>:
TABLE-US-00940 g206.pep 1 MFSPDKTLFL CLGALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIGRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQLVYK NALNVKLPRT 101 ARDMAAASRK IPDSRLKAGD IVFFNTGGAH
RYSHVGLYIG NGEFIHAPGS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 717>:
TABLE-US-00941 m206.seq 1 ATGTTTCCCC CCGACAAAAC CCTTTTCCTC
TGTCTCAGCG CACTGCTCCT 51 CGCCTCATGC GGCACGACCT CCGGCAAACA
CCGCCAACCG AAACCCAAAC 101 AGACAGTCCG GCAAATCCAA GCCGTCCGCA
TCAGCCACAT CGACCGCACA 151 CAAGGCTCGC AGGAACTCAT GCTCCACAGC
CTCGGACTCA TCGGCACGCC 201 CTACAAATGG GGCGGCAGCA GCACCGCAAC
CGGCTTCGAT TGCAGCGGCA 251 TGATTCAATT CGTTTACAAr AACGCCCTCA
ACGTCAAGCT GCCGCGCACC 301 GCCCGCGACA TGGCGGCGGC AAGCCGsAAA
ATCCCCGAcA GCCGCyTCAA 351 GGCCGGCGAC CTCGTATTCT TCAACACCGG
CGGCGCACAC CGCTACTCAC 401 ACGTCGGACT CTACATCGGC AACGGCGAAT
TCATCCATGC CCCCAGCAGC 451 GGCAAAACCA TCAAAACCGA AAAACTCTCC
ACACCGTTTT ACGCCAAAAA 501 CTACCTCGGC GCACATACTT TTTTTACAGA ATGA
This corresponds to the amino acid sequence <SEQ ID 718; ORF
206>:
TABLE-US-00942 m206.pep.. 1 MFPPDKTLFL CLSALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIDRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQFVYK NALNVKLPRT 101 ARDMAAASRK IPDSRXKAGD LVFFNTGGAH
RYSHVGLYIG NGEFIHAPSS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 206
shows 96.0% identity over a 177 aa overlap with a predicted ORF
(ORF 206.ng) from N. gonorrhoeae:
TABLE-US-00943 m206/g206 10 20 30 40 50 60 m206.pep
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS ||
|||||||||:|||||||||||||||||||||||||||||||||| |||||||||||| g206
MFSPDKTLFLCLGALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIGRTQGSQELMLHS 10 20
30 40 50 60 70 80 90 100 110 120 m206.pep
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRXKAGD
||||||||||||||||||||||||||:|||||||||||||||||||||||||||| |||| g206
LGLIGTPYKWGGSSTATGFDCSGMIQLVYKNALNVKLPRTARDMAAASRKIPDSRLKAGD 70 80
90 100 110 120 130 140 150 160 170 m206.pep
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX
:|||||||||||||||||||||||||||:|||||||||||||||||||||||||||| g206
IVFFNTGGAHRYSHVGLYIGNGEFIHAPGSGKTIKTEKLSTPFYAKNYLGAHTFFTE 130 140
150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 719>:
TABLE-US-00944 a206.seq 1 ATGTTTCCCC CCGACAAAAC CCTTTTCCTC
TGTCTCAGCG CACTGCTCCT 51 CGCCTCATGC GGCACGACCT CCGGCAAACA
CCGCCAACCG AAACCCAAAC 101 AGACAGTCCG GCAAATCCAA GCCGTCCGCA
TCAGCCACAT CGACCGCACA 151 CAAGGCTCGC AGGAACTCAT GCTCCACAGC
CTCGGACTCA TCGGCACGCC 201 CTACAAATGG GGCGGCAGCA GCACCGCAAC
CGGCTTCGAT TGCAGCGGCA 251 TGATTCAATT CGTTTACAAA AACGCCCTCA
ACGTCAAGCT GCCGCGCACC 301 GCCCGCGACA TGGCGGCGGC AAGCCGCAAA
ATCCCCGACA GCCGCCTTAA 351 GGCCGGCGAC CTCGTATTCT TCAACACCGG
CGGCGCACAC CGCTACTCAC 401 ACGTCGGACT CTATATCGGC AACGGCGAAT
TCATCCATGC CCCCAGCAGC 451 GGCAAAACCA TCAAAACCGA AAAACTCTCC
ACACCGTTTT ACGCCAAAAA 501 CTACCTCGGC GCACATACTT TCTTTACAGA ATGA
This corresponds to the amino acid sequence <SEQ ID 720; ORF
206.a>:
TABLE-US-00945 a206.pep 1 MFPPDKTLFL CLSALLLASC GTTSGKHRQP
KPKQTVRQIQ AVRISHIDRT 51 QGSQELMLHS LGLIGTPYKW GGSSTATGFD
CSGMIQFVYK NALNVKLPRT 101 ARDMAAASRK IPDSRLKAGD LVFFNTGGAH
RYSHVGLYIG NGEFIHAPSS 151 GKTIKTEKLS TPFYAKNYLG AHTFFTE* m206/a206
99.4% identity in 177 aa overlap 10 20 30 40 50 60 m206.pep
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a206
MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRISHIDRTQGSQELMLHS 10 20
30 40 50 60 70 80 90 100 110 120 m206.pep
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRXKAGD
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| a206
LGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTARDMAAASRKIPDSRLKAGD 70 80
90 100 110 120 130 140 150 160 170 m206.pep
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a206
LVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTEX 130 140
150 160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 721>:
TABLE-US-00946 g209.seq 1 atgctgcggc atttaggaaa cgacttcgcc
ttgggcgcgt tgtttttcga 51 tgctgcggtt gatgtgccac tgctgggcga
tggtcaggag gttgttgacc 101 acccagtaga gaaccaaacc ggcagggaag
aagaagaaca tgacggagaa 151 aaccaacggc atgattttca tcattttcgc
ctgcatcggg tcggtcggcg 201 gcgggttcag ataggtttgg gcgaacatcg
ttgccgccat aatgatgggc 251 aggatgtagt aggggtcggc gcggctgagg
tcggtaatcc agcccagcca 301 aggtgcctgg cgcaattcta cggaggcgaa
caatgcccag tacaagccga 351 tgaagacggg gatttgcaac agcataggca
gacagccgcc cagcgggttg 401 atttcctcgt cttcgaaaag ctgcatcatc
gcttgctgtt gcgccatacg 451 gtcgtcgccg tatttttctt tgatggtctg
cagttcgggt gcggcggcac 501 gcattttcgc catcgaacgg taggaggcgt
tggtcaatgg atacagtacg 551 gctttgacga tgatggtcaa aacgacgatt
gcccagcccc agttgccgat 601 aatgttgtgc agttggttca ggagccagaa
gagcggcgat gcgaaccagt 651 gtactttacc gtagtctttt gccagttgca
ggttgtcggc gatgtttgcg 701 ataacggatg tggtttgcgg accggcatac
aggttgaccg ccattttcgg 751 ttttggcccc cgggttggga tagcggttaa
This corresponds to the amino acid sequence <SEQ ID 722; ORF
209.ng>:
TABLE-US-00947 g209.pep 1 MLRHLGNDFA LGALFFDAAV DVPLLGDGQE
VVDHPVENQT GREEEEHDGE 51 NQRHDFHHFR LHRVGRRRVQ IGLGEHRCRH
NDGQDVVGVG AAEVGNPAQP 101 RCLAQFYGGE QCPVQADEDG DLQQHRQTAA
QRVDFLVFEK LHHRLLLRHT 151 VVAVFFFDGL QFGCGGTHFR HRTVGGVGQW
IQYGFDDDGQ NDDCPAPVAD 201 NVVQLVQEPE ERRCEPVYFT VVFCQLQVVG
DVCDNGCGLR TGIQVDRHFR 251 FWPPGWDSG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 723>:
TABLE-US-00948 m209.seq 1 ATGCTGCGGC ATTTAGGAAA CGACTTCGCC
TTGGgGCGTT GTTTTTCGAT 51 GCTGCGGTTG ATGTGCCATT GCTGGGCGAT
GGTCAGGAGG TTGTTGACTA 101 CCCAGTACAA TACCAGACCG GCAGGGAAGA
AGAAGAACAT GACGGAGAAA 151 ACCAACGGCA TGATTTTCAT CATTTTCGCC
TGCATCGGGT CGGTCGGCGG 201 CGGGTTCAGA TAAGTTTGGG CGAACATCGT
TGCCGCCATA ATGATGGGCA 251 GGATGTAGTA GGGGTCGGCG CGGCTGAGGT
CGGTAATCCA ACCCAGCCAA 301 GGTGCCTGGC GCAATTCTAC GGAGGCGAAC
AATGCCCAAT ACAATCCGAT 351 GAAGACGGGG ATTTGCAACA GCATAGGCAG
GCAGCCGCCC AGCGGGTTGA 401 TTTTCTCGTC TGTGTAAAGC TGCATCATCG
CCTGTTGTTG CGCCATACGG 451 TCGTCGCCGT ATTTCTCTTT GATGGCTTGC
AGTTTGGGTG CGGCGGCACG 501 CATTTTCGCC ATAGAGCGGT AAGAGGCGTT
GGTCAATGGA TACAGTACGG 551 CTTTGACGAT GATGGTTAAA ACGATAATCG
CCCAGCCCCA GTTGCCGATG 601 ATGTTGTGCA GTTGGTTCAG GAGCCAGAAG
AGCGGGGAGG CGAACCAGTG 651 TACTTTGCCG TAGTCTTTGG CCAGTTGCAG
GTTGTCGGCG ATGTTTGCGA 701 TGACGGATGT GGTCTGCGGG CCGGCGTAGA
GGTTGATGGA GGCTTCGgTT 751 TCGCGCCGTT TTGGATGGCG GCTAAAGGCA
CGCTGACGCT GGTGCTGTAC 801 AGCTTGTCGT TGCGGCGTTT GATGTCGATG
TTGCACTCGC CTGCGGCGCA 851 AACGCTTTGT CTGCCTTTAG GTTGGAGAAT
CCAGGTGGAC ATGAAGTGGT 901 GTTCAATCAT GCCGAGCCAG CCGGTCGGGG
TTTTGCGGAT GTATTCGGCC 951 TCGGATTTGC CGGATTTGGC ATCGTCGTCC
AAGTCGGAAA AGCTGACTTT 1001 TTGGAAGTTG CCTTCAGGGG TATAA
This corresponds to the amino acid sequence <SEQ ID 724; ORF
209>:
TABLE-US-00949 m209.pep 1 MLRHLGNDFA LGALFFDAAV DVPLLGDGQE
VVDYPVQYQT GREEEEHDGE 51 NQRHDFHHFR LHRVGRRRVQ ISLGEHRCRH
NDGQDVVGVG AAEVGNPTQP 101 RCLAQFYGGE QCPIQSDEDG DLQQHRQAAA
QRVDFLVCVK LHHRLLLRHT 151 VVAVFLFDGL QFGCGGTHFR HRAVRGVGQW
IQYGFDDDG* NDNRPAPVAD 201 DVVQLVQEPE ERGGEPVYFA VVFGQLQVVG
DVCDDGCGLR AGVEVDGGFG 251 FAPFWMAAKG TLTLVLYSLS LRRLMSMLHS
PAAQTLCLPL GWRIQVDMKW 301 CSIMPSQPVG VLRMYSASDL PDLASSSKSE
KLTFWKLPSG V*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 209
shows 88.5% identity over a 253 aa overlap with a predicted ORF
(ORF 209.ng) from N. gonorrhoeae:
TABLE-US-00950 m209/g209 10 20 30 40 50 60 m209.pep
MLRHLGNDFALGALFFDAAVDVPLLGDGQEVVDYPVQYQTGREEEEHDGENQRHDFHHFR
|||||||||||||||||||||||||||||||||:||: |||||||||||||||||||||| g209
MLRHLGNDFALGALFFDAAVDVPLLGDGQEVVDHPVENQTGREEEEHDGENQRHDFHHFR 10 20
30 40 50 60 70 80 90 100 110 120 m209.pep
LHRVGRRRVQISLGEHRCRHNDGQDVVGVGAAEVGNPTQPRCLAQFYGGEQCPIQSDEDG
|||||||||||:|||||||||||||||||||||||||:|||||||||||||||:|:|||| g209
LHRVGRRRVQIGLGEHRCRHNDGQDVVGVGAAEVGNPAQPRCLAQFYGGEQCPVQADEDG 70 80
90 100 110 120 130 140 150 160 170 180 m209.pep
DLQQHRQAAAQRVDFLVCVKLHHRLLLRHTVVAVFLFDGLQFGCGGTHFRHRAVRGVGQW
|||||||:||||||||| ||||||||||||||||:||||||||||||||||:| ||||| g209
DLQQHRQTAAQRVDFLVFEKLHHRLLLRHTVVAVFFFDGLQFGCGGTHFRHRTVGGVGQW 130
140 150 160 170 180 190 200 210 220 230 240 m209.pep
IQYGFDDDGXNDNRPAPVADDVVQLVQEPEERGGEPVYFAVVFGQLQVVGDVCDDGCGLR
||||||||| ||: ||||||:||||||||||| |||||:||| ||||||||||:||||| g209
IQYGFDDDGQNDDCPAPVADNVVQLVQEPEERRCEPVYFTVVFCQLQVVGDVCDNGCGLR 190
200 210 220 230 240 250 260 270 280 290 299 m209.pep
AGVEVDGGFGF-APFWMAAKGTLTLVLYSLSLRRLMSMLHSPAAQTLCLPLGWRIQVDMK :|::||
| | | | g209 TGIQVDRHFRFWPPGWDSG 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 725>:
TABLE-US-00951 a209.seq 1 ATGCTGCGGC ATTTAGGAAA CGACTTCGCC
TTGGGCGCGT TGTTTTTCGA 51 TGCTGCGGTT GATGTGCCAT TGCTGGGCGA
TGGTCAGGAG GTTGTTGATC 101 ACCCAGTACA ATACCAGACC GGCAGGGAAG
AAGAAGAACA TGACGGAGAA 151 AACCAAAGGC ATGATTTTCA TCATTTTCGC
CTGCATCGGG TCGGTCGGCG 201 GCGGGTTCAG ATAGGTTTGG GCGAACATCG
TTGCCGCCAT AATGATGGGC 251 AGGATGTAGT AGGGGTCGGC GCGGCTGAGG
TCGGTAATCC AACCCAGCCA 301 AGGTGCCTGG CGCAATTCTA CGGAGGCGAA
CAATGCCCAA TACAATCCGA 351 TGAAGACGGG GATTTGCAAC AGCATAGGCA
GGCAGCCGCC CAGCGGGTTG 401 ATTTTCTCGT CTGTGTAAAG CTGCATCATG
GCTTGTTGCT GCGCCATACG 451 GTCGTCGCCG TATTTCTCTT TGATGGCTTG
CAGTTTGGGC GCGGCGGCAC 501 GCATTTTCGC CATCGAACGG TAAGAGGCGT
TGGTCAATGG ATACAGTACG 551 GCTTTGACGA TGATGGTTAA AACGATAATC
GCCCAGCCCC AGTTGCCGAT 601 GATGTTGTGC AGTTGGTTCA AAAGCCAAAA
GAGGGGGGAG GCGAACCAGT 651 GTACTTTGCC GTAGTCTTTG GCCAGTTGCA
GGTTGTCGGC GATGTTTGCG 701 ATAACGGATG TGGTCTGTGG GCCGGCGTAG
AGGTTGATGG AGGCTTCGGT 751 TTCGCACCGT TTTGGATAGC GGCTAAAGGC
ACGCTGACGC TGGTGCTGTA 801 CAGCTTGTCG TTGCGGCGTT TGATGTCGAT
ACGGCAGTCG CCAGCGGCGC 851 AAACGCTTTG TCCGCCTTTG GGTTGGAGGA
TCCAGGTGGA CATGAAGTGG 901 TGTTCAATCA TGCCGAGCCA GCCGGTCGGG
GTTTTGCGGA TGTATTCGGC 951 CTCGGATTTG CCGGATTTGG CATCGTCGTC
CAAGTCGGAG AAGCTGACTT 1001 TTTGGAAGTT GCCTTCAGGG GTATAA
This corresponds to the amino acid sequence <SEQ ID 726; ORF
209.a>:
TABLE-US-00952 a209.pep 1 MLRHLGNDFA LGALFFDAAV DVPLLGDGQE
VVDHPVQYQT GREEEEHDGE 51 NQRHDFHHFR LHRVGRRRVQ IGLGEHRCRH
NDGQDVVGVG AAEVGNPTQP 101 RCLAQFYGGE QCPIQSDEDG DLQQHRQAAA
QRVDFLVCVK LHHGLLLRHT 151 VVAVFLFDGL QFGRGGTHFR HRTVRGVGQW
IQYGFDDDG* NDNRPAPVAD 201 DVVQLVQKPK EGGGEPVYFA VVFGQLQVVG
DVCDNGCGLW AGVEVDGGFG 251 FAPFWIAAKG TLTLVLYSLS LRRLMSIRQS
PAAQTLCPPL GWRIQVDMKW 301 CSIMPSQPVG VLRMYSASDL PDLASSSKSE
KLTFWKLPSG V* m209/a209 95.6% identity in 341 aa overlap 10 20 30
40 50 60 m209.pep
MLRHLGNDFALGALFFDAAVDVPLLGDGQEVVDYPVQYQTGREEEEHDGENQRHDFHHFR
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| a209
MLRHLGNDFALGALFFDAAVDVPLLGDGQEVVDHPVQYQTGREEEEHDGENQRHDFHHFR 10 20
30 40 50 60 70 80 90 100 110 120 m209.pep
LHRVGRRRVQISLGEHRCRHNDGQDVVGVGAAEVGNPTQPRCLAQFYGGEQCPIQSDEDG
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| a209
LHRVGRRRVQIGLGEHRCRHNDGQDVVGVGAAEVGNPTQPRCLAQFYGGEQCPIQSDEDG 70 80
90 100 110 120 130 140 150 160 170 180 m209.pep
DLQQHRQAAAQRVDFLVCVKLHHRLLLRHTVVAVFLFDGLQFGCGGTHFRHRAVRGVGQW
||||||||||||||||||||||| ||||||||||||||||||| ||||||||:||||||| a209
DLQQHRQAAAQRVDFLVCVKLHHGLLLRHTVVAVFLFDGLQFGRGGTHFRHRTVRGVGQW 130
140 150 160 170 180 190 200 210 220 230 240 m209.pep
IQYGFDDDGXNDNRPAPVADDVVQLVQEPEERGGEPVYFAVVFGQLQVVGDVCDDGCGLR
|||||||||||||||||||||||||||:|:| ||||||||||||||||||||||:|||| a209
IQYGFDDDGXNDNRPAPVADDVVQLVQKPKEGGGEPVYFAVVFGQLQVVGDVCDNGCGLW 190
200 210 220 230 240 250 260 270 280 290 300 m209.pep
AGVEVDGGFGFAPFWMAAKGTLTLVLYSLSLRRLMSMLHSPAAQTLCLPLGWRIQVDMKW
|||||||||||||||:||||||||||||||||||||: :|||||||| |||||||||||| a209
AGVEVDGGFGFAPFWIAAKGTLTLVLYSLSLRRLMSIRQSPAAQTLCPPLGWRIQVDMKW 250
260 270 280 290 300 310 320 330 340 m209.pep
CSIMPSQPVGVLRMYSASDLPDLASSSKSEKLTFWKLPSGVX
|||||||||||||||||||||||||||||||||||||||||| a209
CSIMPSQPVGVLRMYSASDLPDLASSSKSEKLTFWKLPSGVX 310 320 330 340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 727>:
TABLE-US-00953 g211.seq 1 atgttgcgga ttgctgctgc caatcagttg
ggcggtcgaa atggtgcggc 51 ggtgggaaac ggggtcgata agtttgggcg
tggtgctgat aatcaggttg 101 agtttttgga aggaaacctg attgtagtcg
gcgcgtccgg gcgtgccgct 151 gtaacggtag ccgtggcgca attcgagcgt
gcgtttgttg tccttcagcg 201 agaagttacc ttctttggcg aagatgatgt
tgtcgccgcc gtttttgtcc 251 tgttcgcgca ggaacaggtt tttcatgatg
ccggattcgg tgtcaaaggt 301 ttcgacgaaa taaaccctgc cgttgcgctt
gcccaagtta ttgaactcgc 351 cggcttccac caaagacaat tcctgcttct
gcttcaaaat ttcggcatat 401 tcgcggctgc gcagctctgc ccacggtatc
acccaaagct gcatgacggc 451 aatcaggatg gcaaacggca cggcaaactg
catgacgggg cgtatccact 501 gtttcaacgc caatccgcag gatag
This corresponds to the amino acid sequence <SEQ ID 728; ORF
211.ng>:
TABLE-US-00954 g211.pep 1 MLRIAAANQL GGRNGAAVGN GVDKFGRGAD
NQVEFLEGNL IVVGASGRAA 51 VTVAVAQFER AFVVLQREVT FFGEDDVVAA
VFVLFAQEQV FHDAGFGVKG 101 FDEINPAVAL AQVIELAGFH QRQFLLLLQN
FGIFAAAQLC PRYHPKLHDG 151 NQDGKRHGKL HDGAYPLFQR QSAG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 729>:
TABLE-US-00955 m211.seq 1 ATGTTGCGGG TTGCTGCTGC CAATCAGTTG
GGCGGTCGGA ATGGTACGGC 51 GGTGGGAAAC GGGGTCGATG AGTTTGGGCG
TGGTGCTGAT AATCAGGTTG 101 AGTTTTTGGA AGGAAACCTG ATTGTAGTCG
GCGCGTCCGG GCGTGCCGCT 151 GTAACGGTAG CCGTGGCGCA ATTCGAGCGT
GCGTTTGTTG TCGTTCAGCG 201 AGAAGTTACC TTCTTTGGCG AAGATGATGT
TGTCGCCGCC GTTTTTGTCC 251 TGTTCGCGCA GGAACAGGTT TTTCATGATG
CCGGATTCGG TATCGAAGGT 301 TTCGACAAAA TAAACCCTGC CGTTGCGCTT
GCCCAAACTG TTGAACTCGC 351 CTGCCTCCAC CAAAGACAAT TCCTGCTTCT
GCTTCAGGAT TTCAGCGTAT 401 TCGCGGCTGC GTAGCTCTGC CCACGGTATC
ACCCAAAGCT GCATGACGGC 451 AACCAAAACG GCAAACGGCA CGGCAAACTG
CATCACCGGG CGTATCCATT 501 GTTTCAATGC CAATCCGCAg GATAG
This corresponds to the amino acid sequence <SEQ ID 730; ORF
211>:
TABLE-US-00956 m211.pep 1 MLRVAAANQL GGRNGTAVGN GVDEFGRGAD
NQVEFLEGNL IVVGASGRAA 51 VTVAVAQFER AFVVVQREVT FFGEDDVVAA
VFVLFAQEQV FHDAGFGIEG 101 FDKINPAVAL AQTVELACLH QRQFLLLLQD
FSVFAAAXLC PRYHPKLHDG 151 NQNGKRHGKL HHRAYPLFQC QSAG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 211
shows 89.1% identity over a 174 aa overlap with a predicted ORF
(ORF 211.ng) from N. gonorrhoeae:
TABLE-US-00957 m211/g211 10 20 30 40 50 60 m211.pep
MLRVAAANQLGGRNGTAVGNGVDEFGRGADNQVEFLEGNLIVVGASGRAAVTVAVAQFER
|||:|||||||||||:|||||||:|||||||||||||||||||||||||||||||||||| g211
MLRIAAANQLGGRNGAAVGNGVDKFGRGADNQVEFLEGNLIWGASGRAAVTVAVAQFER 10 20
30 40 50 60 70 80 90 100 110 120 m211.pep
AFVVVQREVTFFGEDDVVAAVFVLFAQEQVFHDAGFGIEGFDKINPAVALAQTVELACLH
||||:||||||||||||||||||||||||||||||||::|||:|||||||||::||| :| g211
AFVVLQREVIFFGEDDVVAAVFVLFAQEQVFHDAGFGVKGFDEINPAVALAQVIELAGFH 70 80
90 100 110 120 130 140 150 160 170 m211.pep
QRQFLLLLQDFSVFAAAXLCPRYHPKLHDGNQNGKRHGKLHHRAYPLFQCQSAGX
|||||||||:|::|||| ||||||||||||||:|||||||| |||||| |||| g211
QRQFLLLLQNFGIFAAAQLCPRYHPKLHDGNQDGKRHGKLHDGAYPLFQRQSAG 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 731>:
TABLE-US-00958 a211.seq 1 ATGTTGCGGG TTGCTGCTGC CAATCAGTTG
GGCGGTCGGA ATGGTACGGC 51 GGTGGGAAAC GGGGTCGATG AGTTTGGGCG
TGGTGCTGAT AATCAGGTTG 101 AGTTTTTGGA AGGAAACCTG ATTGTAGTCG
GCGCGTCCGG GCGTGCCGCT 151 GTAACGGTAG CCGTGGCGCA ATTCGAGCGT
GCGTTTGTTG TCGTTCAGCG 201 AGAAGTTACT TTCTTTGGCG AAGATGATGT
TGTCGCCGCC GTTTTTGTCC 251 TGTTCGCGCA GGAACAGGTT TTTCATGATG
CCGGATTCGG TATCGAAGGT 301 TTCGACAAAA TAAACCCTGC CGTTGCGCTT
GCCCAAACTG TTGAACCCGC 351 CTGCCTCCAC CAAAGACAAT TCCTGCTTCT
GCTTCAGGAT TTCAGCGTAT 401 TCGCGGCTGC GTAGCTCTGC CCACGGTATC
ACCCAAAGCT GCATGACGGC 451 AACCAAAACG GCAAACGGCA CGGCAAACTG
CATCACCGGG CGTATCCATT 501 GTTTCAATGC CAATCCGCAG GATAG
This corresponds to the amino acid sequence <SEQ ID 732; ORF
211.a>:
TABLE-US-00959 a211.pep 1 MLRVAAANQL GGRNGTAVGN GVDEFGRGAD
NQVEFLEGNL IVVGASGRAA 51 VTVAVAQFER AFVVVQREVT FFGEDDVVAA
VFVLFAQEQV FHDAGFGIEG 101 FDKINPAVAL AQTVEPACLH QRQFLLLLQD
FSVFAAA*LC PRYHPKLHDG 151 NQNGKRHGKL HHRAYPLFQC QSAG* m211/a211
99.4% identity in 174 aa overlap 10 20 30 40 50 60 m211.pep
MLRVAAANQLGGRNGTAVGNGVDEFGRGADNQVEFLEGNLIVVGASGRAAVTVAVAQFER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a211
MLRVAAANQLGGRNGTAVGNGVDEFGRGADNQVEFLEGNLIVVGASGRAAVTVAVAQFER 10 20
30 40 50 60 70 80 90 100 110 120 m211.pep
AFVVVQREVTFFGEDDVVAAVFVLFAQEQVFHDAGFGIEGFDKINPAVALAQTVELACLH
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| a211
AFVVVQREVTFFGEDDVVAAVFVLFAQEQVFHDAGFGIEGFDKINPAVALAQTVEPACLH 70 80
90 100 110 120 130 140 150 160 170 m211.pep
QRQFLLLLQDFSVFAAAXLCPRYHPKLHDGNQNGKRHGKLHHRAYPLFQCQSAGX
||||||||||||||||||||||||||||||||||||||||||||||||||||||| a211
QRQFLLLLQDFSVFAAAXLCPRYHPKLHDGNQNGKRHGKLHHRAYPLFQCQSAGX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 733>:
TABLE-US-00960 g212.seq (partial) 1 atggacaatc tcgtatggga
cggcattccc gacatccgca cactcgacca 51 aaccatccgc aaacacgcac
acccgctcaa cctgattgtc tgcctccccg 101 ataatcagat tcccgatttt
caaaccgcac aagatgcttc ggactcggaa 151 tgccgtctga agcaccgttt
ggatcaggca acccagtgcc tccagttcga 201 cagcatcaac ctcatcgaac
acatcctgcc cgatgtccgc ttctggctgg 251 ttcccccttc acgcacccgc
cgcctgcacg aacacttcca ccacatttcc 301 tggcagaccg aagccatccc
gcaaaccgaa agcaagtccg acaaaccctg 351 gtttgcactt ccacaaacat
ccgaacggaa aaaaccggaa cacgtcctcg 401 tcatcggtgc aggcattgcc
ggcgcatcga ccgcccacgc cttagcatca 451 cacggcattt ccgttaccgt
attggaagcc cgaaaagccg ctcaagccgc 501 cagcggcaac cggcaagggc
tgctttacgc caaaatctcg ccgcacgaca 551 ccggacagac cgaactgctg
cttgccggct acggctacac caaacgcctg 601 ctcggacaca tcctgcccga
ctccgacact tggggcggca acggcatcat 651 ccacctcaat tacagccgca
ccgaacaaca acgcaatcac gaattgggtt 701 tgcaaaaaca ccataaccac
ctctaccgca gcatcacgtc tgcagaagcc 751 gaaaaaatcg ccggcatccc
gctgaacacg ccctacgccg aaccattatg 801 cggactctac tggcaacacg
gcgtatggct caatccgccc gcattcgtcc 851 gcaccctcct cagccatccg
ctgatcgaac tatatgaaaa cacaacgtta 901 accggcattt cccacgacgg
agaaaagtgg attgcaagca cgccaaacgg 951 cacatttacc gccacacaca
tcatctactg caccggcgcg cacagcccct 1001 gcctgcccga aaccaacctc
gccgccctac ccctcaggca aatacgcgga 1051 caaaccggcc tcacaccgtc
caccccgttt tccgaacaac tgcgttgcgc 1101 cgtttcaggc gaaagctaca
tcagcccgtc gtggcacgga ctgcactgct 1151 acggcgcgag ttttattccc
aacagcagca ataccggatg gaacgaagcc 1201 gaagaagcct caaaccgcca
agcattggca caccttaacc ccgcccttgc 1251 cgaatcattg ttt...
This corresponds to the amino acid sequence <SEQ ID 734; ORF
212.ng>:
TABLE-US-00961 g212.pep (partial) 1 MDNLVWDGIP DIRTLDQTIR
KHAHPLNLIV CLPDNQIPDF QTAQDASDSE 51 CRLKHRLDQA TQCLQFDSIN
LIEHILPDVR FWLVPPSRTR RLHEHFHHIS 101 WQTEAIPQTE SKSDKPWFAL
PQTSERKKPE HVLVIGAGIA GASTAHALAS 151 HGISVTVLEA RKAAQAASGN
RQGLLYAKIS PHDTGQTELL LAGYGYTKRL 201 LGHILPDSDT WGGNGIIHLN
YSRTEQQRNH ELGLQKHHNH LYRSITSAEA 251 EKIAGIPLNT PYAEPLCGLY
WQHGVWLNPP AFVRTLLSHP LIELYENTTL 301 TGISHDGEKW IASTPNGTFT
ATHIIYCTGA HSPCLPETNL AALPLRQIRG 351 QTGLTPSTPF SEQLRCAVSG
ESYISPSWHG LHCYGASFIP NSSNTGWNEA 401 EEASNRQALA HLNPALAESL F...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 735>:
TABLE-US-00962 m212.seq 1 ATGGACAATC TCGTATGGGA CGGCATTCCC
GACATCCGCA CACTCGACCA 51 AGCCATCCGC AAACACGCAC CCCCGCTCAA
CCTGATTATC TGCCTCCCCG 101 ATAATCAGAT TCCCGATTTT CAAACCGCAC
AAGATGCTTC GGACGCGGAA 151 TGCCGTCTGA AGCACCGTTT GGATCAGGCA
ATGCAGTGCC TCCAGTTCGA 201 CAGCATCAAC CTCATCGAAC ACATCCTGCC
CGATGTCCGC TTCTGGCTGG 251 TTCCCCCTTC ACGCACCCAC CACCTGCACG
AACATTTCCA CCACATTTCC 301 TGGCAGACCG AAGCCATCCC GCAAACCGAA
AGCAAGCCCG ACAAACCCTG 351 GTTTGCACTT CCACAAACAT CCGAACGGCA
AAAACCGGAA CACATCCTCG 401 TTATCGGCGC GGGCATATCC GGCGCGGCAA
CCGCCCACGC CTTAGCATCA 451 CACGGCATTT CCGTTACCGT ATTGGAAGCC
CGAAAAGCCG CCCAAGCCGC 501 CAGCGGCAAC CGCCAAGGGC TGCTCTACGC
CAAAATCTCG CCGCACGACA 551 CCGAACAGAC CGAACTTTTG CTTGCCGGCT
ACGGCTACAC CAAACGCCTG 601 CTCGGACACA TCCTGCCCGA ATCCGAAACC
TGGGGCGGCA ACGGCATCAT 651 CCACCTCAAT TACAGCCGCA CCGAACAACA
ACGCAATCAC GAATTGGGTT 701 TGCAAAAACA CCATAACCAC CTCTACCGCA
GCATCACATC TGCAGAAGCC 751 GAAAAAATCG CCGGTATCCC ACTGTCCGTC
CCATACGACC ACCCTTCATG 801 CGGACTCTAC TGGCAACACG GCGTATGGCT
CAATCCACCC GCATTCGTCC 851 GCACCCTCCT CAACCATCCG CTCATTGGAC
TACACGAAGA CACACCCTTG 901 ACCGACATTT CCCACGACGG GGaAAAGTGG
ATTGCAAGCA CGCCAAACGG 951 CACATTTACC GCCACACACA TCATCTACTG
CACCGGTGCG AACAGCCCCT 1001 ACCTACCCGA AACCAACCTC GCCGCCCTGC
CTCTCAGGCA AATACGCGGA 1051 CAAACCGGCC TCACACCGTC CACCCCGTTT
TCCGAACAAC TGCGTTGCGC 1101 CGTTTCAGGC GAAAGCTACA TCAGCCCGTC
GTGGCACGGA CTGCACTGCT 1151 ACGGCGCGAG TTTTATTCCC AACAGCAGCC
ATACCGGATG GAACGAAGCC 1201 GAAGAAGCCT CAAACCGCCA AGCATTGGCA
CACCTTAACC CCGCCCTTTC 1251 CGAATCATTG TTTGCCGCCA ACCCAAACCC
CCAAAAACAC CAAGGGCACG 1301 CCGCCATACG CTGCGACAGC CCCGACCACC
TTCCCCTAGT CGGCGCACTC 1351 GGCGACATTG CCGCCATGCG GCAGACCTAC
ACCAAACTCG CGCTGGACAA 1401 AAACTACCGC ATCGACACCC CATGCCCATA
CCTGCCTAAT GCCTACGTCA 1451 ACACCGCGCA CGGCACCCGC GGACTCGCCA
CCGCCCCCAT CTGCGCCGCC 1501 GmCAwTGCAG CCCAAATCsT AGGCyTGCCC
CATCCCTTTT yAcAAcGCCT 1551 gCGCCACGCC cTAcACCCCA ACCGCACCAT
CATCCGCGCC ATCGTCAGAA 1601 GGAAGGATCT AACCCCTTAA
This corresponds to the amino acid sequence <SEQ ID 736; ORF
212>:
TABLE-US-00963 m212.pep 1 MDNLVWDGIP DIRTLDQAIR KHAPPLNLII
CLPDNQIPDF QTAQDASDAE 51 CRLKHRLDQA MQCLQFDSIN LIEHILPDVR
FWLVPPSRTH HLHEHFHHIS 101 WQTEAIPQTE SKPDKPWFAL PQTSERQKPE
HILVIGAGIS GAATAHALAS 151 HGISVTVLEA RKAAQAASGN RQGLLYAKIS
PHDTEQTELL LAGYGYTKRL 201 LGHILPESET WGGNGIIHLN YSRTEQQRNH
ELGLQKHHNH LYRSITSAEA 251 EKIAGIPLSV PYDHPSCGLY WQHGVWLNPP
AFVRTLLNHP LIGLHEDTPL 301 TDISHDGEKW IASTPNGTFT ATHIIYCTGA
NSPYLPETNL AALPLRQIRG 351 QTGLTPSTPF SEQLRCAVSG ESYISPSWHG
LHCYGASFIP NSSHTGWNEA 401 EEASNRQALA HLNPALSESL FAANPNPQKH
QGHAAIRCDS PDHLPLVGAL 451 GDIAAMRQTY TKLALDKNYR IDTPCPYLPN
AYVNTAHGTR GLATAPICAA 501 XXAAQIXGLP HPFXQRLRHA LHPNRTIIRA
IVRRKDLTP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 212
shows 92.9% identity over a 421 aa overlap with a predicted ORF
(ORF 212.ng) from N. gonorrhoeae:
TABLE-US-00964 m212/g212 10 20 30 40 50 60 m212.pep
MDNLVWDGIPDIRTLDQAIRKHAPPLNLIICLPDNQIPDFQTAQDASDAECRLKHRLDQA
|||||||||||||||||:||||| |||||:||||||||||||||||||:||||||||||| g212
MDNLVWDGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQDASDSECRLKHRLDQA 10 20
30 40 50 60 70 80 90 100 110 120 m212.pep
MQCLQFDSINLIEHILPDVRFWLVPPSRTHHLHEHFHHISWQTEAIPQTESKPDKPWFAL
||||||||||||||||||||||||||||::||||||||||||||||||||| ||||||| g212
TQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQTEAIPQTESKSDKPWFAL 70 80
90 100 110 120 130 140 150 160 170 180 m212.pep
PQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEARKAAQAASGNRQGLLYAKIS
||||||:||||:|||||||:||:||||||||||||||||||||||||||||||||||||| g212
PQTSERKKPEHVLVIGAGIAGASTAHALASHGISVTVLEARKAAQAASGNRQGLLYAKIS 130
140 150 160 170 180 190 200 210 220 230 240 m212.pep
PHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIHLNYSRTEQQRNHELGLQKHHNH ||||
|||||||||||||||||||||:|:||||||||||||||||||||||||||||||| g212
PHDTGQTELLLAGYGYTKRLLGHILPDSDTWGGNGIIHLNYSRTEQQRNHELGLQKHHNH 190
200 210 220 230 240 250 260 270 280 290 300 m212.pep
LYRSITSAEAEKIAGIPLSVPYDHPSCGLYWQHGVWLNPPAFVRTLLNHPLIGLHEDTPL
||||||||||||||||||::|| :| |||||||||||||||||||||:|||| |:|:| | g212
LYRSITSAEAEKIAGIPLNTPYAEPLCGLYWQHGVWLNPPAFVRTLLSHPLIELYENTTL 250
260 270 280 290 300 310 320 330 340 350 360 m212.pep
TDISHDGEKWIASTPNGTFTATHIIYCTGANSPYLPETNLAALPLRQIRGQTGLTPSTPF |
||||||||||||||||||||||||||||:|| |||||||||||||||||||||||||| g212
TGISHDGEKWIASTPNGTFTATHIIYCTGAHSPCLPETNLAALPLRQIRGQTGLTPSTPF 310
320 330 340 350 360 370 380 390 400 410 420 m212.pep
SEQLRCAVSGESYISPSWHGLHCYGASFIPNSSHTGWNEAEEASNRQALAHLNPALSESL
|||||||||||||||||||||||||||||||||:||||||||||||||||||||||:||| g212
SEQLRCAVSGESYISPSWHGLHCYGASFIPNSSNTGWNEAEEASNRQALAHLNPALAESL 370
380 390 400 410 420 430 440 450 460 470 480 m212.pep
FAANPNPQKHQGHAAIRCDSPDHLPLVGALGDIAAMRQTYTKLALDKNYRIDTPCPYLPN | g212
F
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 737>:
TABLE-US-00965 a212.seq 1 ATGGACAATC TCGCATGGAA CGGCATTCCC
GACATCCGCA CACTCGACCA 51 AACCATCCGC AAACACGCAC ACCCGCTCAA
CCTGATTGTC TGCCTCCCCG 101 ATAATCAGAT TCCCAATTTT CAAACCGCAC
AAGATGCTTC GGACGCGGAA 151 TGCCGTCTGA AGCACCGTTT GGATCAGGCA
ACCCAGTGCC TCCAGTTCGA 201 CAGCATCAAC CTGATTGAAC ACATCCTGCC
CGATGTCCGC TTCTGGCTGG 251 TTCCCCCTTC ACGCACCCGC CGCCTGCACG
AACACTTCCA CCACATTTCC 301 TGGCAGACCG AAGCCATCCC GCAAACCGAA
AGTAAGCCCG ACAAACCCTG 351 GTTTGCACTT CCACAAACAT CCGAACGGCA
AAAACCGGAA CACATCCTCG 401 TTATCGGAGC GGGCATATCC GGCGCGGCAA
CCGCCCACGC CTTAGCATCA 451 TACGGCATTT CCGTTACCGT ATTGGAAGCC
CGAAAAGCCG CCCAAGCCGC 501 CAGCGGCAAC CGCCAAGGGC TGCTCTACGC
CAAAATCTCG CCGCACGACA 551 CCGAACAAAC CGAACTGCTG CTTGCCGGCT
ACGGCTACAC CAAACGCCTG 601 CTCGGACATA TCCTGCCCGA ATCCGAAACC
TGGGGCGGCA ACGGCATCAT 651 CCACCTCAAT TACAGCCGCA CCGAACAACA
ACGCAATCAC GAATTGGGTT 701 TGCAAAAACA CCATAACCAC CTCTACCGCA
GCATCACGCA GGCAGAAGCC 751 GAAAAAATCG CCGGCATCCC TCTGAACACG
CCCTACGCCG AACCATTATG 801 CGGACTGTTT TGGCAGTACG GCGTATGGCT
CAATCCTCCC ACATTCGTCC 851 GCGCCCTCCT CAGCCATCCG CTCATTGGAC
TACACGAAGA CACACCGTTA 901 ACCGACATTT CCCACGACGG GGAAAAGTGG
ATTGCAAGCA CGCCAAACGG 951 CACATTTACC GCCACACACA TCATCTACTG
CACCGGTGCG AACAGCCCCT 1001 ACCTACCCGA AACCAACCTC GCCACCCTGC
CCCTCAGGCA AATACGCGGA 1051 CAAACCGGCC TCACACCGTC CACCCCGTTT
TCCGAACAAC TGCGTTGCGC 1101 CGTTTCAGGC GAAAGCTACA TCAGCCCGTC
GTGGCACGGA CTGCACTGCT 1151 ACGGCGCGAG TTTTATTCCC AACAGCAGCC
ATACCGGATG GAACGAAGCC 1201 GAAGAAGCCT CAAACCGCCA AGCATTGGCA
CACCTTAACC CCGCCCTTTC 1251 CGAATCATTG TTTGCCGCCA ACCCAAACCC
CCAAAAACAC CAAGGGCACG 1301 CCGCCATACG CTGCGACAGC CCCGACCACC
TTCCCCTAGT CGGCGCACTC 1351 GGCGACATTG CCGCTATGCA ACAAACTTAC
GCCAAACTCG CGCTGGACAA 1401 AAACTATCGC ATCGATGCCC CCTGCCCGTA
CCTGCCCAAT GCCTACGCCA 1451 ACACCGCCCA CGGCACACGC GGGCTTGCCA
CCGCCCCCAT CTGCGCCGCC 1501 GCCGTTGCAG CCGAAATCCT AGGCTTGCCC
CATCCCCTCT CAAAACGCCT 1551 GCGCCACGCC CTACACCCCA ACCGCGCCAT
CATCCGCGCC ATCGTCAGAA 1601 GGAAGGATCT AACCCCTTAA
This corresponds to the amino acid sequence <SEQ ID 738; ORF
212.a>:
TABLE-US-00966 a212.pep 1 MDNLAWNGIP DIRTLDQTIR KHAHPLNLIV
CLPDNQIPNF QTAQDASDAE 51 CRLKHRLDQA TQCLQFDSIN LIEHILPDVR
FWLVPPSRTR RLHEHFHHIS 101 WQTEAIPQTE SKPDKPWFAL PQTSERQKPE
HILVIGAGIS GAATAHALAS 151 YGISVTVLEA RKAAQAASGN RQGLLYAKIS
PHDTEQTELL LAGYGYTKRL 201 LGHILPESET WGGNGIIHLN YSRTEQQRNH
ELGLQKHHNH LYRSITQAEA 251 EKIAGIPLNT PYAEPLCGLF WQYGVWLNPP
TFVRALLSHP LIGLHEDTPL 301 TDISHDGEKW IASTPNGTFT ATHIIYCTGA
NSPYLPETNL ATLPLRQIRG 351 QTGLTPSTPF SEQLRCAVSG ESYISPSWHG
LHCYGASFIP NSSHTGWNEA 401 EEASNRQALA HLNPALSESL FAANPNPQKH
QGHAAIRCDS PDHLPLVGAL 451 GDIAAMQQTY AKLALDKNYR IDAPCPYLPN
AYANTAHGTR GLATAPICAA 501 AVAAEILGLP HPLSKRLRHA LHPNRAIIRA
IVRRKDLTP* m212/a212 93.7% identity in 539 aa overlap 10 20 30 40
50 60 m212.pep
MDNLVWDGIPDIRTLDQAIRKHAPPLNLIICLPDNQIPDFQTAQDASDAECRLKHRLDQA
||||:|:||||||||||:||||| |||||:||||||||:||||||||||||||||||||| a212
MDNLAWNGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPNFQTAQDASDAECRLKHRLDQA 10 20
30 40 50 60 70 80 90 100 110 120 m212.pep
MQCLQFDSINLIEHILPDVRFWLVPPSRTHHLHEHFHHISWQTEAIPQTESKPDKPWFAL
||||||||||||||||||||||||||||::||||||||||||||||||||||||||||| a212
TQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQTEAIPQTESKPDKPWFAL 70 80
90 100 110 120 130 140 150 160 170 180 m212.pep
PQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEARKAAQAASGNRQGLLYAKIS
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||| a212
PQTSERQKPEHILVIGAGISGAATAHALASYGISVTVLEARKAAQAASGNRQGLLYAKIS 130
140 150 160 170 180 190 200 210 220 230 240 m212.pep
PHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIHLNYSRTEQQRNHELGLQKHHNH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a212
PHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIHLNYSRTEQQRNHELGLQKHHNH 190
200 210 220 230 240 250 260 270 280 290 300 m212.pep
LYRSITSAEAEKIAGIPLSVPYDHPSCGLYWQHGVWLNPPAFVRTLLNHPLIGLHEDTPL
||||||:|||||||||||::|| :| |||:||:|||||||:|||:||:|||||||||||| a212
LYRSITQAEAEKIAGIPLNTPYAEPLCGLFWQYGVWLNPPTFVRALLSHPLIGLHEDTPL 250
260 270 280 290 300 310 320 330 340 350 360 m212.pep
TDISHDGEKWIASTPNGTFTATHIIYCTGANSPYLPETNLAALPLRQIRGQTGLTPSTPF
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| a212
TDISHDGEKWIASTPNGTFTATHIIYCTGANSPYLPETNLATLPLRQIRGQTGLTPSTPF 310
320 330 340 350 360 370 380 390 400 410 420 m212.pep
SEQLRCAVSGESYISPSWHGLHCYGASFIPNSSHTGWNEAEEASNRQALAHLNPALSESL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a212
SEQLRCAVSGESYISPSWHGLHCYGASFIPNSSHTGWNEAEEASNRQALAHLNPALSESL 370
380 390 400 410 420 430 440 450 460 470 480 m212.pep
FAANPNPQKHQGHAAIRCDSPDHLPLVGALGDIAAMRQTYTKLALDKNYRIDTPCPYLPN
||||||||||||||||||||||||||||||||||||:|||:|||||||||||:||||||| a212
FAANPNPQKHQGHAAIRCDSPDHLPLVGALGDIAAMQQTYAKLALDKNYRIDAPCPYLPN 430
440 450 460 470 480 490 500 510 520 530 540 m212.pep
AYVNTAHGTRGLATAPICAAXXAAQIXGLPHPFXQRLRHALHPNRTIIRAIVRRKDLTPX
||:||||||||||||||||| ||:| |||||: :||||||||||:|||||||||||||| a212
AYANTAHGTRGLATAPICAAAVAAEILGLPHPLSKRLRHALHPNRAIIRAIVRRKDLTPX 490
500 510 520 530 540
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 739>:
TABLE-US-00967 g214.seq 1 atgatacaaa agatatgtaa gctatttgtt
ttaattgtaa tttttgcaac 51 ttctcccgct tttgcccttc aaagcgacag
cagacggccc atccaaatcg 101 aagccgacca aggttcgctc gatcaagcca
accaaaggac cacatttagc 151 ggcaatgtca tcatcagaca gggtacgctc
aacatttccg cctcgtgtgt 201 caacgtcaca cgcggcaggc aaaggcggcg
aatccgtgag ggcggaaggt 251 tcgcccgtcc gcttcagcca aacgttggac
gggggcaaag ggacggtgcg 301 cggtcaggca aacaacgtta cctattcctc
cgcaggaagc actgtcgttc 351 tgaccggcaa tgccaaagtg cagcgcggcg
gcgacgttgc cgaaggtgcg 401 gtcattacct acaacaccaa aaccgaagtc
tataccatca acggcagcac 451 gaaatcgggt gcgaaatccg cttccaaaac
cggcagggtc agcgtcgtca 501 tccagccttc aagcacacaa aaaaccgaat
aaccccgatg ccgtctgaaa 551 cggaaacgca gttcagacgg catttgccga
ccgaaatgcc gagaagagat 601 tattga
This corresponds to the amino acid sequence <SEQ ID 740; ORF
214. ng>:
TABLE-US-00968 g214.pep 1 MIQKICKLFV LIVIFATSPA FALQSDSRRP
IQIEADQGSL DQANQRTTFS 51 GNVIIRQGTL NISASCVNVT RGRQRRRIRE
GGRFARPLQP NVGRGQRDGA 101 RSGKQRYLFL RRKHCRSDRQ CQSAARRRRC
RRCGHYLQHQ NRSLYHQRQH 151 EIGCEIRFQN RQGQRRHPAF KHTKNRITPM
PSETETQFRR HLPTEMPRRD 201 Y
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 741>:
TABLE-US-00969 m214.seq (partial) 1 ATGATACAAA AGATATGTAA
GCTATTTGTT TTAATAGCAT TTTTTTCGGC 51 GTCCCCCGCT TTTGCCCTTC
AAAGCGACAG CAGGCAGCCT ATTCAGATTG 101 AGGCCGACCA AGGTTCGCTC
GATCAAGCCA ACCAAAGCAC CACATTCAGC 151 GGAAACGTCG TCATCAGACA
GGGTACGCTC AATATTTCCG CCGCCCGCGT 201 CAATGTTACA CGCGGCGGCA
AAGGCGGCGA ATCCGTGAGG GCGGAAGGTT 251 CGCCAGTCCG CTTCAGCCAG
ACATTGGACG GCGGCAAAGG CACGGTGCGC 301 GGACAGGCAA ACAACGTTGC
TTATTCATCT GCAGGCAGCA CCGTAGTCTT 351 AACCGGTAAT GCCAAAGTAC
AGCGCGGCGG CGATGTCGCC GAAGGTGCGG 401 TGATTACATA CAACACCAAA
ACCGAAGTCT ATACCATCAG CGGCAGCACA 451 AAATT...
This corresponds to the amino acid sequence <SEQ ID 742; ORF
214>:
TABLE-US-00970 m214.pep (partial) 1 MIQKICKLFV LIAFFSASPA
FALQSDSRQP IQIEADQGSL DQANQSTTFS 51 GNVVIRQGTL NISAARVNVT
RGRQRRRIRE GGRFASPLQP DIGRRQRHGA 101 RTGKQRCLFI CRQHRSLNR*
CQSTARRRCR RRCGDYIQHQ NRSLYHQRQH 151 KI...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 214
shows 80.3% identity over a 152 aa overlap with a predicted ORF
(ORF 214.ng) from N. gonorrhoeae:
TABLE-US-00971 m214/g214 10 20 30 40 50 60 m214.pep
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL
||||||||||||::|::|||||||||||:|||||||||||||||| |||||||:|||||| g214
MIQKICKLFVLIVIFATSPAFALQSDSRRPIQIEADQGSLDQANQRTTFSGNVIIRQGTL 10 20
30 40 50 60 70 80 90 100 110 120 m214.pep
NISAARVNVTRGRQRRRIREGGRFASPLQPDIGRRQRHGARTGKQRCLFICRQHRSLNRX ||||:
||||||||||||||||||| ||||::|| || |||:|||| ||: |:| :| g214
NISASCVNVTRGRQRRRIREGGRFARPLQPNVGRGQRDGARSGKQRYLFLRRKHCRSDRQ 70 80
90 100 110 120 130 140 150 m214.pep
CQSTARRRCRRRCGDYIQHQNRSLYHQRQHKI |||:|||| |||| |:|||||||||||||:|
g214 CQSAARRRRCRRCGHYLQHQNRSLYHQRQHEIGCEIRFQNRQGQRRHPAFKHTKNRITPM
130 140 150 160 170 180 g214 PSETETQFRRHLPTEMPRRDY 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 743>:
TABLE-US-00972 a214.seq 1 ATGATACAAA AGATATGTAA GCTATTTGTT
TTAATAGCAT TTTTTTCGGC 51 GTCCCCCGCT TTTGCCCTTC AAAGCGACAG
CAGGCAGCCT ATTCAGATTG 101 AGGCCGACCA AGGTTCGCTC GATCAAGCCA
ACCAAAGCAC CACATTCAGC 151 GGAAACGTCG TCATCAGACA GGGTACGCTC
AATATTTCCG CCGCCCGCGT 201 CAATGTTACA CGCGGC.GGC AAAGGCGGCG
AATCCGTGAG GGCGGAAGGT 251 TCGCCAGTCC GCTTCAGCCA GACATTGGAC
GGCGGCAAAG GCACGGTGCG 301 CGGACAGGCA AACAACGTTG CTTATTCATC
TGCAGGCAGC ACCGTAGTCT 351 TAACCGGTAA TGCCAAAGTA CAGCGCGGCG
GCGATGTCGC CGAAGGTGCG 401 GTGATTACAT ACAACACCAA AACCGAAGTC
TATACCATCA GCGGCAGCAC 451 AAAATCCGGC GCAAAATCCG CTTCCAAATC
CGGCAGGGTC AGCGTCGTTA 501 TCCAGCCTTC GAGTACGCAA AAATCCGAAT
AATCCCAATG CCGTCTGAAA 551 CATAAACCTG GTTCGGACGG CATTTGCCGA
CCGAAATATT GAAGAGATAT 601 TTATGA
This corresponds to the amino acid sequence <SEQ ID 744; ORF
214.a>:
TABLE-US-00973 a214.pep 1 MIQKICKLFV LIAFFSASPA FALQSDSRQP
IQIEADQGSL DQANQSTTFS 51 GNVVIRQGTL NISAARVNVT RGXQRRRIRE
GGRFASPLQP DIGRRQRHGA 101 RTGKQRCLFI CRQHRSLNR* CQSTARRRCR
RRCGDYIQHQ NRSLYHQRQH 151 KIRRKIRFQI RQGQRRYPAF EYAKIRIIPM
PSET*TWFGR HLPTEILKRY 201 L* m214/a214 99.3% identity in 152 aa
overlap 10 20 30 40 50 60 m214.pep
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a214
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL 10 20
30 40 50 60 70 80 90 100 110 120 m214.pep
NISAARVNVTRGRQRRRIREGGRFASPLQPDIGRRQRHGARTGKQRCLFICRQHRSLNRX
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| a214
NISAARVNVTRGXQRRRIREGGRFASPLQPDIGRRQRHGARTGKQRCLFICRQHRSLNRX 70 80
90 100 110 120 130 140 150 m214.pep
CQSTARRRCRRRCGDYIQHQNRSLYHQRQHKI ||||||||||||||||||||||||||||||||
a214 CQSTARRRCRRRCGDYIQHQNRSLYHQRQHKIRRKIRFQIRQGQRRYPAFEYAKIRIIPM
130 140 150 160 170 180 a214 PSETXTWFGRHLPTEILKRYLX 190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 745>:
TABLE-US-00974 g214-1.seq 1 ATGATACAAA AGATATGTAA GCTATTTGTT
TTAATTGTAA TTTTTGCAAC 51 TTCTCCCGCT TTTGCCCTTC AAAGCGACAG
CAGACGGCCC ATCCAAATCG 101 AAGCCGACCA AGGTTCGCTC GATCAAGCCA
ACCAAAGTAC CACATTTAGC 151 GGCAATGTCA TCATCAGACA GGGTACGCTC
AACATTTCCG CCTCGCGCGT 201 CAACGTCACA CGCGGCGGCA AAGGCGGCGA
ATCCGTGAGG GCGGAAGGTT 251 CGCCCGTCCG CTTCAGCCAA ACGTTGGACG
GGGGCAAAGG GACGGTGCGC 301 GGTCAGGCAA ACAACGTTAC CTATTCCTCC
GCAGGAAGCA CCGTCGTTCT 351 GACCGGCAAT GCCAAAGTGC AGCGCGGCGG
CGACGTTGCC GAAGGTGCGG 401 TCATTACCTA CAACACCAAA ACCGAAGTCT
ATACCATCAA CGGCAGCACG 451 AAATCGGGTG CGAAATCCGC TTCCAAAACC
GGCAGGGTCA GCGTCGTCAT 501 CCAGCCTTCA AGCACACAAA AAACCGAATA A
This corresponds to the amino acid sequence <SEQ ID 746; ORF
214-1.ng>:
TABLE-US-00975 g214-1.pep 1 MIQKICKLFV LIVIFATSPA FALQSDSRRP
IQIEADQGSL DQANQSTTFS 51 GNVIIRQGTL NISASRVNVT RGGKGGESVR
AEGSPVRFSQ TLDGGKGTVR 101 GQANNVTYSS AGSTVVLTGN AKVQRGGDVA
EGAVITYNTK TEVYTINGST 151 KSGAKSASKT GRVSVVIQPS STQKTE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 747>:
TABLE-US-00976 m214-1.seq 1 ATGATACAAA AGATATGTAA GCTATTTGTT
TTAATAGCAT TTTTTTCGGC 51 GTCCCCCGCT TTTGCCCTTC AAAGCGACAG
CAGGCAGCCT ATTCAGATTG 101 AGGCCGACCA AGGTTCGCTC GATCAAGCCA
ACCAAAGCAC CACATTCAGC 151 GGAAACGTCG TCATCAGACA GGGTACGCTC
AATATTTCCG CCGCCCGCGT 201 CAATGTTACA CGCGGCGGCA AAGGCGGCGA
ATCCGTGAGG GCGGAAGGTT 251 CGCCAGTCCG CTTCAGCCAG ACATTGGACG
GCGGCAAAGG CACGGTGCGC 301 GGACAGGCAA ACAACGTTGC TTATTCATCT
GCAGGCAGCA CCGTAGTCTT 351 AACCGGTAAT GCCAAAGTAC AGCGCGGCGG
CGATGTCGCC GAAGGTGCGG 401 TGATTACATA CAACACCAAA ACCGAAGTCT
ATACCATCAG CGGCAGCACA 451 AAATCCGGCG CAAAATCCGC TTCCAAATCC
GGCAGGGTCA GCGTCGTTAT 501 CCAGCCTTCG AGTACGCAAA AATCCGAATA A
This corresponds to the amino acid sequence <SEQ ID 748; ORF
214-1>:
TABLE-US-00977 m214-1.pep 1 MIQKICKLFV LIAFFSASPA FALQSDSRQP
IQIEADQGSL DQANQSTTFS 51 GNVVIRQGTL NISAARVNVT RGGKGGESVR
AEGSPVRFSQ TLDGGKGTVR 101 GQANNVAYSS AGSTVVLTGN AKVQRGGDVA
EGAVITYNTK TEVYTISGST 151 KSGAKSASKS GRVSVVIQPS STQKSE*
m214-1/g214-1 93.8% identity in 176 aa overlap 10 20 30 40 50 60
m214-1.pep
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL
||||||||||||::|::|||||||||||:||||||||||||||||||||||||:|||||| g214-1
MIQKICKLFVLIVIFATSPAFALQSDSRRPIQIEADQGSLDQANQSTTFSGNVIIRQGTL 10 20
30 40 50 60 70 80 90 100 110 120 m214-1.pep
NISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQANNVAYSSAGSTVVLTGN
||||:|||||||||||||||||||||||||||||||||||||||||:||||||||||||| g214-1
NISASRVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQANNVTYSSAGSTVVLTGN 70 80
90 100 110 120 130 140 150 160 170 m214-1.pep
AKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKSGRVSVVIQPSSTQKSEX
||||||||||||||||||||||||||:||||||||||||:||||||||||||||:|| g214-1
AKVQRGGDVAEGAVITYNTKTEVYTINGSTKSGAKSASKTGRVSVVIQPSSTQKTEX 130 140
150 160 170 g214-1/p38685 sp|P38685|YHBN_ECOLI 17.3 KD PROTEIN IN
MURA-RPON INTERGENIC REGION PRECURSOR (ORF185) >gi|551336
(U12684) orf185 [Escherichia coli] >gi|606139 (U18997) ORF_o185
[Escherichia coli] >gi|1789592 (AE000399) orf, hypothetical
protein [Escherichia coli] Length = 185 Score = 97.1 bits (238),
Expect = 6e-20 Identities = 57/126 (45%), Positives = 74/126 (58%),
Gaps = 3/126 (2%) Query: 19
PAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTLNISAARVNVTR--GGKGG 76
PAFA+ D+ QPI IE+DQ SLD TF+GNV++ QGT+ I+A +V VTR G +G Sbjct: 24
PAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGK 83
Query: 77
ESVRAEGSPVRFSQTLDGGKGTVRGQANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVIT 136 E
+ G P F Q D GK V G A+ + Y A VVLTGNA +Q+ +G IT Sbjct: 84
EVIDGYGKPATFYQMQDNGK-PVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKIT 142
Query: 137 YNTKTE 142 Y K + Sbjct: 143 YLVKEQ 148
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 749>:
TABLE-US-00978 a214-1.seq 1 ATGATACAAA AGATATGTAA GCTATTTGTT
TTAATAGCAT TTTTTTCGGC 51 GTCCCCCGCT TTTGCCCTTC AAAGCGACAG
CAGGCAGCCT ATTCAGATTG 101 AGGCCGACCA AGGTTCGCTC GATCAAGCCA
ACCAAAGCAC CACATTCAGC 151 GGAAACGTCG TCATCAGACA GGGTACGCTC
AATATTTCCG CCGCCCGCGT 201 CAATGTTACA CGCGGCGGCA AAGGCGGCGA
ATCCGTGAGG GCGGAAGGTT 251 CGCCAGTCCG CTTCAGCCAG ACATTGGACG
GCGGCAAAGG CACGGTGCGC 301 GGACAGGCAA ACAACGTTGC TTATTCATCT
GCAGGCAGCA CCGTAGTCTT 351 AACCGGTAAT GCCAAAGTAC AGCGCGGCGG
CGATGTCGCC GAAGGTGCGG 401 TGATTACATA CAACACCAAA ACCGAAGTCT
ATACCATCAG CGGCAGCACA 451 AAATCCGGCG CAAAATCCGC TTCCAAATCC
GGCAGGGTCA GCGTCGTTAT 501 CCAGCCTTCG AGTACGCAAA AATCCGAATA A
This corresponds to the amino acid sequence <SEQ ID 750; ORF
214-1.a>:
TABLE-US-00979 a214-1.pep 1 MIQKICKLFV LIAFFSASPA FALQSDSRQP
IQIEADQGSL DQANQSTTFS 51 GNVVIRQGTL NISAARVNVT RGGKGGESVR
AEGSPVRFSQ TLDGGKGTVR 101 GQANNVAYSS AGSTVVLTGN AKVQRGGDVA
EGAVITYNTK TEVYTISGST 151 KSGAKSASKS GRVSVVIQPS STQKSE*
a214-1/m214-1 100.0% identity in 176 aa overlap 10 20 30 40 50 60
a214-1.pep
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m214-1
MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTL 10 20
30 40 50 60 70 80 90 100 110 120 a214-1.pep
NISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQANNVAYSSAGSTVVLTGN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m214-1
NISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQANNVAYSSAGSTVVLTGN 70 80
90 100 110 120 130 140 150 160 170 a214-1.pep
AKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKSGRVSVVIQPSSTQKSEX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m214-1
AKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKSGRVSVVIQPSSTQKSEX 130 140
150 160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 751>:
TABLE-US-00980 g215.seq 1 atgaaagtaa gatggcggta cggaattgcg
ttcccattga tattggcggt 51 tgccttgggc agcctgtcgg catggttggg
ccgtatcagc gaagtcgaaa 101 tcgaggaagt caggctcaat cccgacgaac
ctcaatacac aatggacggc 151 ttggacggaa ggcggtttga cgaacaggga
tacttgaaag aacatttgag 201 cgcgaaaggt gcgaaacagt ttcccgaaaa
cagcgacatc cattttgatt 251 cgccgcatct cgtgttcttc caagaaggca
ggctgttgta cgaagtcggc 301 agcgatgaag ccgtttacca taccgaaaac
aaacaggttc tttttaaaaa 351 caacgttgtg ctgaccaaaa ccgccgacgg
caggcggcag gcgggtaaag 401 tcgaaaccga aaaactgcac gtcgataccg
aatctcaata tgcccaaacc 451 gatacgcctg tcagtttcca atatggcgcg
tcgcacggtc aggcgggcgg 501 tatgacctac aaccacaaaa caggcatgtt
gaacttctca tctaaagtga 551 aagccgcgat ttatgataca aaagatatgt aa
This corresponds to the amino acid sequence <SEQ ID 752; ORF
215.ng>:
TABLE-US-00981 g215.pep 1 MKVRWRYGIA FPLILAVALG SLSAWLGRIS
EVEIEEVRLN PDEPQYTMDG 51 LDGRRFDEQG YLKEHLSAKG AKQFPENSDI
HFDSPHLVFF QEGRLLYEVG 101 SDEAVYHTEN KQVLFKNNVV LTKTADGRRQ
AGKVETEKLH VDTESQYAQT 151 DTPVSFQYGA SHGQAGGMTY NHKTGMLNFS
SKVKAAIYDT KDM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 753>:
TABLE-US-00982 m215.seq (partial) 1 ..AGCCTGTCGG CATGGTTGGG
TCGTATCAGC GAAGTCGAGA TTGAAGAAGT 51 CAGGCTCAAT CCCGACGAAC
CGCAATACAC AATGGACAGC TTGGACGGCA 101 GGCGGTTTGA CGAACAGGGA
TACTTGAAAG AACATTTGAG CGCGAAGGGC 151 GCGAAACAGT TTCCGGAAAG
CAGCGACATC CATTTTGATT CGCCGCATCT 201 CGTGTTCTTC CAAGAAGGCA
GGTTGTTGTA CGAAGTCGGC AGCGACGAAG 251 CCGTTTACCA TACCGAAAAC
AAACAGGTTC TTTTTAAAAA CAACGTTGTG 301 CTGACCAAAA CCGCCGACGG
CAAACGGCAG GCGGGTAAAG TTGAAGCCGA 351 AAAGCTGCAC GTCGATACCG
AATCTCAATA TGCCCAAACC GATACGCCTG 401 CAGTTTCCA ATATGGTGCA
TCGCACGGTC AGGCGGGCGG CATGACTTAC 451 GACCACAwwA CAGGCATGTT
GAACTTCTCA TCTAAAGTGA AAGCCACGAT 501 TTATGATACA AAAGATATGT AA
This corresponds to the amino acid sequence <SEQ ID 754; ORF
215>:
TABLE-US-00983 m215.pep (partial) 1 ..SLSAWLGRIS EVEIEEVRLN
PDEPQYTMDS LDGRRFDEQG YLKEHLSAKG 51 AKQFPESSDI HFDSPHLVFF
QEGRLLYEVG SDEAVYHTEN KQVLFKNNVV 101 LTKTADGKRQ AGKVEAEKLH
VDTESQYAQT DTPVSFQYGA SHGQAGGMTY 151 DHXTGMLNFS SKVKATIYDT KDM*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 215
shows 96.0% identity over a 173 aa overlap with a predicted ORF
(ORF 215.ng) from N. gonorrhoeae:
TABLE-US-00984 m215/g215 10 20 30 40 m215.pep
SLSAWLGRISEVEIEEVRLNPDEPQYTMDSLDGRRFDEQG
|||||||||||||||||||||||||||||:|||||||||| g215
MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEPQYTMDGLDGRRFDEQG 10 20
30 40 50 60 50 60 70 80 90 100 m215.pep
YLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSDEAVYHTENKQVLFKNNVV
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g215
YLKEHLSAKGAKQFPENSDIHFDSPHLVFFQEGRLLYEVGSDEAVYHTENKQVLFKNNVV 70 80
90 100 110 120 110 120 130 140 150 160 m215.pep
LTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGASHGQAGGMTYDHXTGMLNFS
|||||||:|||||||:||||||||||||||||||||||||||||||||||:| ||||||| g215
LTKTADGRRQAGKVETEKLHVDTESQYAQTDTPVSFQYGASHGQAGGMTYNHKTGMLNFS 130
140 150 160 170 180 170 m215.pep SKVKATIYDTKDMX |||||:||||||| g215
SKVKAAIYDTKDM 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 755>:
TABLE-US-00985 a215.seq 1 ATGAAAGTAA GATGGCGGTA CGGAATTGCG
TTCCCATTGA TATTGGCGGT 51 TGCCTTGGGC AGCCTGTCGG CATGGTTGGG
ACGCATCAGC GAAGTCGAGA 101 TTGAAGAAGT CAGGCTCAAT CCCGACGAAC
CGCAATACAC AATGGACGGA 151 TTGGATGGCA GGCGGTTTGA CGAACAGGGA
TACTTGAAAG AACATTTGAG 201 TTCGAAGGGC GCGAAACAGT TTCCCGAAAG
CAGCGACATT CATTTCGACT 251 CACCGCATCT CGTGTTCTTC CAAGAAGGCA
GGTTGTTGTA CGAAGTCGGC 301 AGCGATGAAG CCGTTTACCA TACCGAAAAC
AAACAGGTTC TTTTTAAAAA 351 CAACGTTGTG CTGACCAAAA CCGCCGACGG
CAAACGGCAG GCGGGTAAAG 401 TTGAAGCCGA AAAGCTGCAC GTCGATACCG
AATCTCAATA TGCCCAAACC 451 GATACGCCTG TCAGTTTCCA ATATGGTGCA
TCGCACGGTC AGGCGGGCGG 501 CATGACTTAC GACCACAAAA CAGGCATGTT
GAACTTCTCA TCTAAAGTGA 551 AAGCCACGAT TTATGATACA AAAGATATGT AA
This corresponds to the amino acid sequence <SEQ ID 756; ORF
215.a>:
TABLE-US-00986 a215.pep 1 MKVRWRYGIA FPLILAVALG SLSAWLGRIS
EVEIEEVRLN PDEPQYTMDG 51 LDGRRFDEQG YLKEHLSSKG AKQFPESSDI
HFDSPHLVFF QEGRLLYEVG 101 SDEAVYHTEN KQVLFKNNVV LTKTADGKRQ
AGKVEAEKLH VDTESQYAQT 151 DTPVSFQYGA SHGQAGGMTY DHKTGMLNFS
SKVKATIYDT KDM* m215/a215 98.3% identity in 173 aa overlap 10 20 30
40 m215.pep SLSAWLGRISEVEIEEVRLNPDEPQYTMDSLDGRRFDEQG
|||||||||||||||||||||||||||||:|||||||||| a215
MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEPQYTMDGLDGRRFDEQG 10 20
30 40 50 60 50 60 70 80 90 100 m215.pep
YLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSDEAVYHTENKQVLFKNNVV
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| a215
YLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSDEAVYHTENKQVLFKNNVV 70 80
90 100 110 120 110 120 130 140 150 160 m215.pep
LTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGASHGQAGGMTYDHXTGMLNFS
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| a215
LTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGASHGQAGGMTYDHKTGMLNFS 130
140 150 160 170 180 170 m215.pep SKVKATIYDTKDMX |||||||||||||| a215
SKVKATIYDTKDMX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 757>:
TABLE-US-00987 g216.seq (partial) 1 ..atgatatcga tttcgagctc
ggtacccagc gacgaaatca ccgccatcat 51 ccccgcactc aaacgcaaag
acattaccct cgtctgcatc accgcccgcc 101 ccgattcaac catggcgcgc
catgccgata tccacatcac cgcatcggtt 151 tcgcaagaag cctgcccgtt
ggggcttgcc ccgaccacca gcaccaccgc 201 cgttatggct ttgggcgacg
cgttggcggt cgtcctgctg cgcgcccgcg 251 cgttcacgcc cgacgacttc
gccttgatcc accctgccgg cagcctcggc 301 aaacgcctgc ttttgcgcgt
tgccgacatt atgcacaaag gcggcggcct 351 gcccgccgtc cgactcggca
cgcccttgaa aggagccatc gtcagcatga 401 gcgagaaagg tttgggcatg
tgggcgggaa cggacgggca aaggctgtct 451 gaaaggcctt tttactga
This corresponds to the amino acid sequence <SEQ ID 758; ORF
216.ng>:
TABLE-US-00988 g216.pep (partial) 1 ..MISISSSVPS DEITAIIPAL
KRKDITLVCI TARPDSTMAR HADIHITASV 51 SQEACPLGLA PTTSTTAVMA
LGDALAVVLL RARAFTPDDF ALIHPAGSLG 101 KRLLLRVADI MHKGGGLPAV
RLGTPLKGAI VSMSEKGLGM WAGTDGQRLS 151 ERPFY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 759>:
TABLE-US-00989 m216.seq 1 ATGGCAATGG CAGAAAACGG AAAATATCTC
GACTGGGCAC GCGAAGTGTT 51 GCACGCCGAA GCGGAAGGCT TGCGCGAAAT
TGCAGCGGAA TTGsACAAAA 101 ACTTCGTCCT TGCGGCAGAC GCGTTGTTGC
ACTGCAAGGG CAGGGTCGTT 151 ATCACGGGCA TGGTCAAGTC GGGACATATC
GGGCGCAAAA TGGCGGCAAC 201 TATGGCCTCG ACCGGCACGC CTGCGTTTTT
CGTCCACCCT GCGGAAGCGG 251 CACACGgCGA TTTGGGTATG ATTGTGGACA
rCGACGTGGT CGTCGCGATT 301 TCCAATTCCG GCGAAAGCGA CGAAATCGCC
GCCATCATCC CCGCACTCAA 351 ACGCAAAGAC ATCACGCTTG TCTGCATCAC
CGCCCGCCCC GATTCAACCA 401 TGGCGCGCCA TGCCGACATC CACATCACGG
CGTCGGTTTC CAAAGAAGCC 451 TGCCCGCTGG GGCTTGCCCC GACCACCAGC
ACCACCGCCG TCATGGCTTT 501 GGGCGATGCG TTGGCGGTCG TCCtGCTGCG
CgcACGCGCG TTCACGCCCG 551 ACGATTTCGC CTTGAGCCAT CCTGCCGGCA
GCCTCGGCAA ACGCCTACTT 601 TTGCGCGTTG CCGACATTAT GCACAAAGGC
GGCGGCCTGC CTGCCGTCCG 651 ACTCGGCACG CCCTTGAAAG AAGCCATCGT
CAGCATGAGT GAAAAAGGGC 701 TGGGCATGTT GGCGGTAACG GACGGGCAAG
GCCGTCTGAA AGGCGTATTC 751 ACCGACGGCG ATTTGCGCCG CCTGTTTCAA
GAATGCGACA ATTTTACCGG 801 TCTTTCGATA GACGAAGTCA TGCATACGCA
TCCTAAAACC ATCTCCGCCG 851 AACGTCTCGC CACCGAAGCC CTGAAAGTCA
TGCAGGCAAA CCATGTGAAC 901 GGGCTTCTGG TTACCGATGC AGATGGCGTG
CTGATCGGCG CGCTGAATAT 951 GCACGACCTG CTGGCGGCAC GGATTGTATA G
This corresponds to the amino acid sequence <SEQ ID 760; ORF
216>:
TABLE-US-00990 m216.pep 1 MAMAENGKYL DWAREVLHAE AEGLREIAAE
LXKNFVLAAD ALLHCKGRVV 51 ITGMVKSGHI GRKMAATMAS TGTPAFFVHP
AEAAHGDLGM IVDXDVVVAI 101 SNSGESDEIA AIIPALKRKD ITLVCITARP
DSTMARHADI HITASVSKEA 151 CPLGLAPTTS TTAVMALGDA LAVVLLRARA
FTPDDFALSH PAGSLGKRLL 201 LRVADIMHKG GGLPAVRLGT PLKEAIVSMS
EKGLGMLAVT DGQGRLKGVF 251 TDGDLRRLFQ ECDNFTGLSI DEVMHTHPKT
ISAERLATEA LKVMQANHVN 301 GLLVTDADGV LIGALNMHDL LAARIV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 216
shows 91.8% identity over a 147 aa overlap with a predicted ORF
(ORF 216.ng) from N. gonorrhoeae:
TABLE-US-00991 m216/g216 70 80 90 100 110 120 m216.pep
TMASTGTPAFFVHPAEAAHGDLGMIVDXDWVAISNSGESDEIAAIIPALKRKDITLVCI :::||:|
||||:|||||||||||||||| g216 MISISSSVPSDEITAIIPALKRKDITLVCI 10 20 30
130 140 150 160 170 180 m216.pep
TARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDF
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g216
TARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDF 40 50
60 70 80 90 190 200 210 220 230 240 m216.pep
ALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRL ||
|||||||||||||||||||||||||||||||||| |||||||||||| | |||| g216
ALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMWAGTDGQRLS 100
110 120 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 761>:
TABLE-US-00992 a216.seq 1 ATGGCGATGG CAGGAAACGA AAAATATCTT
GATTGGGCAC GCGAAGTGTT 51 GCACACCGAA GCGGAAGGCT TGCGCGAAAT
TGCGGCGGAT TTGGACGAAA 101 ACTTCGCCCT TGCGGCGGAC GCGTTGTTGC
ACTGCAAAGG CAGGGTCGTT 151 ATCACGGGCA TGGGCAAGTC GGGACATATC
GGGCGCAAAA TGGCGGCAAC 201 CATGGCCTCG ACCGGCACGC CCGCGTTTTT
CGTCCACCCT GCGGAAGCGG 251 CACACGGCGA TTTGGGCATG ATTGTGGACA
ACGACGTGGT CGTCGCGATT 301 TCCAATTCCG GTGAAAGCGA CGAAATCGCC
GCCATCATCC CCGCGCTCAA 351 ACGCAAAGAT ATCACGCTTG TCTGCATCAC
CGCCCGCCCC GATTCAACCA 401 TGGCGCGCCA TGCCGACATC CACATCACGG
CGTCGGTTTC CAAAGAAGCC 451 TGCCCGCTGG GGCTTGCCCC GACCACCAGC
ACCACCGCCG TTATGGCTTT 501 GGGCGATGCG TTGGCGGTTG TCCTGCTGCG
CGCCCGCGCG TTCACGCCCG 551 ACGACTTCGC CTTGAGCCAC CCTGCCGGCA
GCCTCGGCAA ACGCCTACTT 601 TTGCGCGTTG CCGACATTAT GCACAAAGGC
GGCGGCCTGC CTGCCGTCCG 651 ACTCGGCACG CCCTTGAAAG AAGCCATCGT
CAGCATGAGT GAAAAAGGGC 701 TGGGCATGTT GGCGGTAACG GACGGGCAAG
GCCGTCTGAA AGGCGTATTC 751 ACCGACGGCG ATTTGCGCCG CCTGTTTCAA
GAATGCGACA ATTTTACCGG 801 TCTTTCGATA GACGAAGTCA TGCATACGCA
TCCTAAAACC ATCTCCGCCG 851 AACGTCTCGC CACCGAAGCC CTGAAAGTCA
TGCAGGCAAA CCATGTGAAC 901 GGGCTTCTGG TTACCGATGC AGATGGCGTG
CTGATCGGCG CGCTGAATAT 951 GCACGACCTT TTGGCGGCGC GGATTGTATA G
This corresponds to the amino acid sequence <SEQ ID 762; ORF
216.a>:
TABLE-US-00993 a216.pep 1 MAMAGNEKYL DWAREVLHTE AEGLREIAAD
LDENFALAAD ALLHCKGRVV 51 ITGMGKSGHI GRKMAATMAS TGTPAFFVHP
AEAAHGDLGM IVDNDVVVAI 101 SNSGESDEIA AIIPALKRKD ITLVCITARP
DSTMARHADI HITASVSKEA 151 CPLGLAPTTS TTAVMALGDA LAVVLLRARA
FTPDDFALSH PAGSLGKRLL 201 LRVADIMHKG GGLPAVRLGT PLKEAIVSMS
EKGLGMLAVT DGQGRLKGVF 251 TDGDLRRLFQ ECDNFTGLSI DEVMHTHPKT
ISAERLATEA LKVMQANHVN 301 GLLVTDADGV LIGALNMHDL LAARIV* m216/a216
97.2% identity in 326 aa overlap 10 20 30 40 50 60 m216.pep
MAMAENGKYLDWAREVLHAEAEGLREIAAELXKNFVLAADALLHCKGRVVITGMVKSGHI |||| |
|||||||||||:||||||||||:| :||:|||||||||||||||||| ||||| a216
MAMAGNEKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHI 10 20
30 40 50 60 70 80 90 100 110 120 m216.pep
GRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDXDVVVAISNSGESDEIAAIIPALKRKD
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| a216
GRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKD 70 80
90 100 110 120 130 140 150 160 170 180 m216.pep
ITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a216
ITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARA 130
140 150 160 170 180 190 200 210 220 230 240 m216.pep
FTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a216
FTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVT 190
200 210 220 230 240 250 260 270 280 290 300 m216.pep
DGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a216
DGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVN 250
260 270 280 290 300 310 320 m216.pep GLLVTDADGVLIGALNMHDLLAARIVX
||||||||||||||||||||||||||| a216 GLLVTDADGVLIGALNMHDLLAARIVX 310
320
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 763>:
TABLE-US-00994 g217.seq 1 atggcggatg acggtttgtt gcggcaactg
tccgaaaaac ccagccaaag 51 tgctctcttc ctgccatttg acccattcgt
tttcgaggtt ttggactgcc 101 ttttggtcat cgggcccggc ttgaaacaat
gtttcaagca aatcccggca 151 acgcgccacc cattcgccga ccgtcgcagg
ttgccgccat atccgggcaa 201 tatccgacag ggtttcgagg aaggcggcaa
aacgtccgaa catggcggtt 251 tgattcacgt cggcatacca cgcgctgaca
tcctgccaca tcgggttgcc 301 gccttcgggc agcatccagc ccaatatcat
acggtctgcc gcctgcttcc 351 aggtaaacag ctgatccgtg ccgccgcgca
tttctccgtc caatccccaa 401 tggacgttca aatcggcaac catatcgtgc
aaaagcggca aatcgtcccc 451 ggtcagtccg aaacggcgca acacgggcgc
ggtttccaaa agcgcgagca 501 ctttgccgac ttcaaaacgg ctttccagca
agtcggacac gcactccaac 551 gcataaaaaa acggttgccg gcggctgatt
ttcacgtccg aaacggaata 601 cggcaatgcc tgcgcgccgg gttgcgcctg
tccgaacacg gcttccataa 651 aaggcgtata gggttcgata ttcggggtta a
This corresponds to the amino acid sequence <SEQ ID 764; ORF
217.ng>:
TABLE-US-00995 g217.pep.. 1 MADDGLLRQL SEKPSQSALF LPFDPFVFEV
LDCLLVIGPG LKQCFKQIPA 51 TRHPFADRRR LPPYPGNIRQ GFEEGGKTSE
HGGLIHVGIP RADILPHRVA 101 AFGQHPAQYH TVCRLLPGKQ LIRAAAHFSV
QSPMDVQIGN HIVQKRQIVP 151 GQSETAQHGR GFQKREHFAD FKTAFQQVGH
ALQRIKKRLP AADFHVRNGI 201 RQCLRAGLRL SEHGFHKRRI GFDIRG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 765>:
TABLE-US-00996 m217.seq 1 ATGGCGGATG ACGGTGTGCG GCGGCAACTG
TCCGGAAAAT TGCGCCAATT 51 CGGTTTCCGC CTrCCATTTG ACCCATTCGT
TTTCAAGGTT TTGGACTGAC 101 TTTTGGTCAT CGGCTTCAGC TTGGAACAAT
GTTTCAAGCA AATCCCGGCA 151 ACGCGCCACC CATTCGCCGA CCGTTGCGGG
CTGCCGCCAT ATCCGTACAA 201 TATCCGTCAG GGTTTCGAGG AAGGCGGCAA
AACGTCCGAA CATGGCGGTT 251 TGATTCACGT CGGCATACCA CGCGCTGACA
TCCTGCCACA TCGGATTGCC 301 GCCTTTGGGC AGCATCCAGC CCAATATCAT
GCGTTCTACC GCCTGCTTCC 351 AGGTGAACAG CTGATCCGTG CCGCCGCGCA
TTTCTCCGTC CAAACCCCAG 401 TGGACGTTCA AATCGGCAAC CATGTCGTGC
AAAAGCGGTA AATCGTCCTC 451 AGTCAGTCCG AAACGGCGCA ACACGGGCGC
GGTTTCTAAA AGCACAAGCA 501 CTTTATCGAC TTCAAATCGG CTTTCCAACA
AGTCGAACAG GCATGACAAA 551 GCATGAAACA GCGGTTGGCG GCGGCTGATT
TTCACGTCTG ACACGGAATA 601 CGGCAATGCC TGCGCACCgG GctGCGCCTG
TCCGAACACG GCTTCGATAA 651 AAGGCGTATA GGATTCGATA TTCGGGGTTA A
This corresponds to the amino acid sequence <SEQ ID 766; ORF
217>:
TABLE-US-00997 m217.pep 1 MADDGVRRQL SGKLRQFGFR LPFDPFVFKV
LDXLLVIGFS LEQCFKQIPA 51 TRHPFADRCG LPPYPYNIRQ GFEEGGKTSE
HGGLIHVGIP RADILPHRIA 101 AFGQHPAQYH AFYRLLPGEQ LIRAAAHFSV
QTPVDVQIGN HVVQKRXIVL 151 SQSETAQHGR GFXKHKHFID FKSAFQQVEQ
AXQSMKQRLA AADFHVXHGI 201 RQCLRTGLRL SEHGFDKRRI GFDIRG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 217
shows 80.5% identity over a 226 aa overlap with a predicted ORF
(ORF 217.ng) from N. gonorrhoeae:
TABLE-US-00998 m217/g217 10 20 30 40 50 60 m217.pep
MADDGVRRQLSGKLRQFGFRLPFDPFVFKVLDXLLVIGFSLEQCFKQIPATRHPFADRCG |||||:
|||| | | :: ||||||||:||| ||||| :|:|||||||||||||||| g217
MADDGLLRQLSEKPSQSALFLPFDPFVFEVLDCLLVIGPGLKQCFKQIPATRHPFADRRR 10 20
30 40 50 60 70 80 90 100 110 120 m217.pep
LPPYPYNIRQGFEEGGKTSEHGGLIHVGIPRADILPHRIAAFGQHPAQYHAFYRLLPGEQ |||||
||||||||||||||||||||||||||||||||:|||||||||||: |||||:| g217
LPPYPGNIRQGFEEGGKTSEHGGLIHVGIPRADILPHRVAAFGQHPAQYHTVCRLLPGKQ 70 80
90 100 110 120 130 140 150 160 170 180 m217.pep
LIRAAAHFSVQTPVDVQIGNHVVQKRXIVLSQSETAQHGRGFXKHKHFIDFKSAFQQVEQ
|||||||||||:|:|||||||:|||| || :||||||||||| |::|| |||:||||| : g217
LIRAAAHFSVQSPMDVQIGNHIVQKRQIVPGQSETAQHGRGFQKREHFADFKTAFQQVGH 130
140 150 160 170 180 190 200 210 220 m217.pep
AXQSMKQRLAAADFHVXHGIRQCLRTGLRLSEHGFDKRRIGFDIRGX | | :|:|| ||||||
:|||||||:||||||||| |||||||||| g217
ALQRIKKRLPAADFHVRNGIRQCLRAGLRLSEHGFHKRRIGFDIRG 190 200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 767>:
TABLE-US-00999 a217.seq 1 GTGGCGGATG ACGGTGTGCA GCGGCAACTG
TCCGGAAAAT TGCGCCAATT 51 CGGTTTCCGC CTGCCATTTG ACCCATTCGT
TTTCGAGGCT TTGGACTGCC 101 TTTTGGTCAT CGCCTTCGAC TTGGAACAAT
GTTTCAAGCA AATCCCGGCA 151 ACGCGCCACC CATTCGTCAA CCGTCGCAGG
TTGCCGCCAT ATCCGTACAA 201 TATCCGTCAG GGTTTCGAGG AAGGCGGCAA
AACGTCCGAA CAGGGCGGTT 251 TGGTTCACGT CGGCATACCA CGCGCTGACC
CCCTGCCACA TCGGATTGCC 301 GCCTTCGGGC AGCATCCAGC CCAATATCAT
GCGTTCTACC GCCTGCTTCC 351 AGGTGAACAG CTGATCCGTG CCGCCGCGCA
TTTCTCCGTC CAAACCCCAG 401 CGGACGTTCA AATCGGCAAC CATGTCGTGC
AAAAGCGGCA AATCGTCCTC 451 AGTCAGTCCG AAATGGCGCA ACACGGGCGC
GGTTTCTAAA AGCACAAGCA 501 CTTTATCGAC TTCAAATCGG CTTTCCAACA
AGTCGAACAG GCATGACAAA 551 GCATGAAACA GCGGTTGTCG GCGGCTGATT
TTCACATCCG AAACGGAATA 601 CGGCAATGCC TGCGCGCCGG GCTGCGCCTG
TCCGAACACG GCTTCGATAA 651 AAGGCGTATA GGATTCGATA TTCGGGGTTA A
This corresponds to the amino acid sequence <SEQ ID 768; ORF
217.a>:
TABLE-US-01000 a217.pep 1 VADDGVQRQL SGKLRQFGFR LPFDPFVFEA
LDCLLVIAFD LEQCFKQIPA 51 TRHPFVNRRR LPPYPYNIRQ GFEEGGKTSE
QGGLVHVGIP RADPLPHRIA 101 AFGQHPAQYH AFYRLLPGEQ LIRAAAHFSV
QTPADVQIGN HVVQKRQIVL 151 SQSEMAQHGR GF*KHKHFID FKSAFQQVEQ
A*QSMKQRLS AADFHIRNGI 201 RQCLRAGLRL SEHGFDKRRI GFDIRG* m217/a217
90.3% identity in 226 aa overlap 10 20 30 40 50 60 m217.pep
MADDGVRRQLSGKLRQFGFRLPFDPFVFKVLDXLLVIGFSLEQCFKQIPATRHPFADRCG
:|||||:|||||||||||||||||||||::|| ||||:|:|||||||||||||||::| a217
VADDGVQRQLSGKLRQFGFRLPFDPFVFEALDCLLVIAFDLEQCFKQIPATRHPFVNRRR 10 20
30 40 50 60 70 80 90 100 110 120 m217.pep
LPPYPYNIRQGFEEGGKTSEHGGLIHVGIPRADILPHRIAAFGQHPAQYHAFYRLLPGEQ
||||||||||||||||||||:|||:|||||||| |||||||||||||||||||||||||| a217
LPPYPYNIRQGFEEGGKTSEQGGLVHVGIPRADPLPHRIAAFGQHPAQYHAFYRLLPGEQ 70 80
90 100 110 120 130 140 150 160 170 180 m217.pep
LIRAAAHFSVQTPVDVQIGNHVVQKRXIVLSQSETAQHGRGFXKHKHFIDFKSAFQQVEQ
|||||||||||||:|||||||||||| ||||||| ||||||||||||||||||||||||| a217
LIRAAAHFSVQTPADVQIGNHVVQKRQIVLSQSEMAQHGRGFXKHKHFIDFKSAFQQVEQ 130
140 150 160 170 180 190 200 210 220 m217.pep
AXQSMKQRLAAADFHVXHGIRQCLRTGLRLSEHGFDKRRIGFDIRGX |||||||||:|||||:
:|||||||:||||||||||||||||||||| a217
AXQSMKQRLSAADFHIRNGIRQCLRAGLRLSEHGFDKRRIGFDIRGX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 769>:
TABLE-US-01001 g218.seq 1 atggttgcgg tggatcctta tacggcaaaa
gtggtcaaca ccatgccgcg 51 caatcagggt tggtatcaca ctatggatga
aatccacggc gatatgatgc 101 tcggtgcggc aggcgattat cttttggaaa
cggcagcttc actgaccatt 151 attatggttg tcagcggctt gtacctttgg
tgggcgaaac agcgcggcat 201 taaagcgatg ctgctgccgc caaaaagcag
ggcgcgttct tggtggcgga 251 atctgcacgg cgcgtttgga acttgggtgt
cgttgatttt actgttgttc 301 tgcctgtcgg gtattgcttg ggcaggtatt
tggggcggca aattcgtgca 351 ggcttggaat cagttcccgg ccggcaaatg
gggtgtcgaa ccgaaccccg 401 tttcaatcgt gccgacccac ggcgaggtat
tgaatgacgg caaggttaag 451 gaagtgccgt ggattttgga gcttatgcct
atgcctgtct cagggacgac 501 tgtgggtgaa aacggcatta accccaccga
gcccaataac attggaaacc 551 gtcgaccgtt tcgcgcggga aatcggtttc
aaagggcgtt atcagttgaa 601 tttgcccaaa ggcgaggacg gggtatggac
tttgtcgcag gattctatga 651 gttatga
This corresponds to the amino acid sequence <SEQ ID 770; ORF
218.ng>:
TABLE-US-01002 g218.pep 1 MVAVDPYTAK VVNTMPRNQG WYHTMDEIHG
DMMLGAAGDY LLETAASLTI 51 IMVVSGLYLW WAKQRGIKAM LLPPKSRARS
WWRNLHGAFG TWVSLILLLF 101 CLSGIAWAGI WGGKFVQAWN QFPAGKWGVE
PNPVSIVPTH GEVLNDGKVK 151 EVPWILELMP MPVSGTTVGE NGINPTEPNN
IGNRRPFRAG NRFQRALSVE 201 FAQRRGRGMD FVAGFYEL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 771>:
TABLE-US-01003 m218.seq 1 ATGGTCGCGG TCGATCCTTA TACGGCAAAA
GTGGTCAGTA CCATGCCGCG 51 CAATCAGGGT TGGTATTACA CGATGGATGA
AATCCACAGC GATATGATGC 101 TCGGTGCGGC AGGCGATTAT CTTTTGGAAA
CGGCAGCTTC ACTGACCATT 151 ATTATGGTTG TCAGCGGCTT GTACCTTTGG
TGGGTGAAAC GGCGCGGCAT 201 CAAGGCGATG CTGCTGCCGT CAAAAGGCAr
GGCGCGTTCT TGGTGGCGGA 251 ATCTGCACGG CACGTTTGGA ACTTGGGTGT
CGTTGATTTT GCTGTTGTTC 301 TGCCTGTCGG GTATTGCTTG GGCGGGTATT
TGGGGCGGCA AGTTCGTACA 351 GGCTTGGAGT CAGTTCCCTG CCGGTAAATG
GGGTGTCGAA CCGAACCCCG 401 TTTCAGTCGT GCCGACCCAC GGCGAGGTAT
TGAATGACGG CAAGGTTAAG 451 GAAGTGCCGT GGGTTTTGGA GCTTACGCCT
ATGCCTGTTT CAGGGACGaC 501 yGtgGGCAAA GACGGCATTA ACCCTGACGA
GCCGATGACA TTGGAAACCG 551 TCGACCGCTT TGCGCGGnGA AATCGGTTTC
AAAGGGCGTT ATCAGTTGAA 601 TTTGCCCAAA GGCGAGGACG GCGTATGGAC
TTTGTCGCAG GATTCTATGA 651 GTTA
This corresponds to the amino acid sequence <SEQ ID 772; ORF
218>:
TABLE-US-01004 m218.pep 1 MVAVDPYTAK VVSTMPRNQG WYYTMDEIHS
DMMLGAAGDY LLETAASLTI 51 IMVVSGLYLW WVKRRGIKAM LLPSKGXARS
WWRNLHGTFG TWVSLILLLF 101 CLSGIAWAGI WGGKFVQAWS QFPAGKWGVE
PNPVSVVPTH GEVLNDGKVK 151 EVPWVLELTP MPVSGTTVGK DGINPDEPMT
LETVDRFARX NRFQRALSVE 201 FAQRRGRRMD FVAGFYEL
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 218
shows 87.2% identity over a 218 aa overlap with a predicted ORF
(ORF 218.ng) from N. gonorrhoeae:
TABLE-US-01005 m218/g218 10 20 30 40 50 60 m218.pep
MVAVDPYTAKVVSTMPRNQGWYYTMDEIHSDMMLGAAGDYLLETAASLTIIMVVSGLYLW
||||||||||||:|||||||||:||||||:|||||||||||||||||||||||||||||| g218
MVAVDPYTAKVVNTMPRNQGWYHTMDEIHGDMMLGAAGDYLLETAASLTIIMVVSGLYLW 10 20
30 40 50 60 70 80 90 100 110 120 m218.pep
WVKRRGIKAMLLPSKGXARSWWRNLHGTFGTWVSLILLLFCLSGIAWAGIWGGKFVQAWS
|:|:||||||||| |: ||||||||||:|||||||||||||||||||||||||||||||: g218
WAKQRGIKAMLLPPKSRARSWWRNLHGAFGTWVSLILLLFCLSGIAWAGIWGGKFVQAWN 70 80
90 100 110 120 130 140 150 160 170 180 m218.pep
QFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVSGTTVGKDGINPDEPMT
|||||||||||||||:||||||||||||||||||:||| ||||||||||::|||| || : g218
QFPAGKWGVEPNPVSIVPTHGEVLNDGKVKEVPWILELMPMPVSGTTVGENGINPTEPNN 130
140 150 160 170 180 190 200 210 m218.pep
LETVDRFARXNRFQRALSVEFAQRRGRRMDFVAGFYEL : : | |||||||||||||||||
|||||||||| g218 IGNRRPFRAGNRFQRALSVEFAQRRGRGMDFVAGFYEL 190 200
210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 773>:
TABLE-US-01006 a218.seq 1 ATGGTCGCGG TCGATCCTTA TACGGCAAAA
GTGGTCAGTA CCATGCCGCG 51 CAATCAGGGT TGGTATTACG CGATGGATGA
AATCCACAGC GATATGATGC 101 TCGGTTCGAC AGGTGATTAT CTTTTGGAAA
CGGCTGCATC GCTGACGATT 151 ATCATGATAA TCAGCGGTTT GTACCTTTGG
TGGGTGAAAC GGCGCGGCAT 201 CAAGGCGATG CTGCTGCCGC CAAAAGGCAG
GGCGCGTTCT TGGTGGCGGA 251 ATCTGCACGG CGCGTTTGGA ACTTGGGTGT
CGTTGATTTT ACTGTTGTTC 301 TGCCTGTCGG GTATTGCTTG GGCAGGTATT
TGGGGCGGCA AGTTCGTGCA 351 GGCTTGGAGT CAGTTCCCGG CAGGCAAATG
GGGTGTCGAA CCGAACCCTG 401 TTTCAGTCGT GCCGACCCAC GGCGAGGTAT
TGAATGACGG CAAGGTTAAG 451 GAAGTGCCGT GGGTTTTGGA GCTTACGCCT
ATGCCTGTTT CAGGGACGAC 501 TGTGGGCAAA GACGGTATTA ACCCTGACGA
GCCGATGACA TTGGAAACCG 551 TCGACCGTTT TGCGCGG.GA AATCGGTTTC
AAAGGGCGTT ATCAGCTGAA 601 TTTGCCCAAA GGCGAGGACG GCGTATGGAC
TTTGTCGCAG GATTCTATGA 651 GTTA
This corresponds to the amino acid sequence <SEQ ID 774; ORF
218.a>:
TABLE-US-01007 a218.pep 1 MVAVDPYTAK VVSTMPRNQG WYYAMDEIHS
DMMLGSTGDY LLETAASLTI 51 IMIISGLYLW WVKRRGIKAM LLPPKGRARS
WWRNLHGAFG TWVSLILLLF 101 CLSGIAWAGI WGGKFVQAWS QFPAGKWGVE
PNPVSVVPTH GEVLNDGKVK 151 EVPWVLELTP MPVSGTTVGK DGINPDEPMT
LETVDRFARX NRFQRALSAE 201 FAQRRGRRMD FVAGFYEL m218/a218 95.9%
identity in 218 aa overlap 10 20 30 40 50 60 m218.pep
MVAVDPYTAKVVSTMPRNQGWYYTMDEIHSDMMLGAAGDYLLETAASLTIIMVVSGLYLW
|||||||||||||||||||||||:|||||||||||::|||||||||||||||::|||||| a218
MVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASLTIIMIISGLYLW 10 20
30 40 50 60 70 80 90 100 110 120 m218.pep
WVKRRGIKAMLLPSKGXARSWWRNLHGTFGTWVSLILLLFCLSGIAWAGIWGGKFVQAWS
||||||||||||| || ||||||||||:|||||||||||||||||||||||||||||||| a218
WVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIAWAGIWGGKFVQAWS 70 80
90 100 110 120 130 140 150 160 170 180 m218.pep
QFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVSGTTVGKDGINPDEPMT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a218
QFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVSGTTVGKDGINPDEPMT 130
140 150 160 170 180 190 200 210 m218.pep
LETVDRFARXNRFQRALSVEFAQRRGRRMDFVAGFYEL
||||||||||||||||||:||||||||||||||||||| a218
LETVDRFARXNRFQRALSAEFAQRRGRRMDFVAGFYEL 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 775>:
TABLE-US-01008 g219.seq 1 atgacggcaa ggttaaggaa gtgccgtgga
ttttggagct tatgcctatg 51 cctgtctcag ggacgactgt gggtgaaaac
ggcattaacc ccaccgagcc 101 caataacatt ggaaaccgtc gaccgtttcg
cgcgggaaat cggtttcaaa 151 gggcgttatc agttgaattt gcccaaaggc
gaggacgggg tatggacttt 201 gtcgcaggat tctatgagtt atgacatgat
cagcccgttt gccgaccgca 251 cggtacatat cgaccagtac agcggcgaga
ttcttgccga catccgtttt 301 gacgattaca acccgttcgg caaatttatg
gcggcaagca ttgcgctgca 351 tatggggact ttgggctggt ggagcgtgtt
ggcgaacgtc gtgttctgcc 401 ttgccgtgat ttttatcggc atcagcggct
gcgtgatgtg gtggaaacgc 451 cgtccgtccg gcgtggcggg cattgttcct
ccggcgcaaa aaatcaaact 501 gcccgtctgg tgggcgatgg cattgccgct
gctgttgatt gcactgcttt 551 tcccgaccgc gctgcttgcc attgccgtga
tttggctgtt ggataccttg 601 ctgctgtcgc ggattcctgt gttgaggaaa
tggtttaaat ga
This corresponds to the amino acid sequence <SEQ ID 776; ORF
219.ng>:
TABLE-US-01009 g219.pep 1 MTARLRKCRG FWSLCLCLSQ GRLWVKTALT
PPSPITLETV DRFAREIGFK 51 GRYQLNLPKG EDGVWTLSQD SMSYDMISPF
ADRTVHIDQY SGEILADIRF 101 DDYNPFGKFM AASIALHMGT LGWWSVLANV
VFCLAVIFIG ISGCVMWWKR 151 RPSGVAGIVP PAQKIKLPVW WAMALPLLLI
ALLFPTALLA IAVIWLLDTL 201 LLSRIPVLRK WFK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 777>:
TABLE-US-01010 m219.seq 1 ATGACGGCAA GGTTAAGGAA GTGCCGTGGG
TTTTGGAGCT TACGCCTATG 51 CCTGTTTCAG GGACGaCyGt gGGCAAAGAC
GGCATTAACC CTGACGAGCC 101 GATGACATTG GAAACCGTCG ACCGCTTTGC
GCGGnGAAAT CGGTTTCAAA 151 GGGCGTTATC AGTTGAATTT GCCCAAAGGC
GAGGACGGCG TATGGACTTT 201 GTCGCAGGAT TCTATGAGTT ACGACATGAT
CAGCCCGTTT GCCGACCGCA 251 CGGTACATAT CGACCAGTAC AGCGGCAAAA
TCCTTGCCGA CATCCGTTTT 301 GACGATTACA ACCCGTTCGG CAAATTTATG
GCGGCAAGCA TTGCGCTGCA 351 TATGGGGACT CTGGGCTGGT GGAGCGTGTT
GGCGAACGTC TTGTTCTGCC 401 TTGCCGTCAT TTTTATCGGT ATCAGCGGCT
GCGTGATGTG GTGGAAACGC 451 CGTCCGACCG GAGCGGTGGG CATCGTTCCG
CCGGCGCAGA AAGTCAAGCT 501 GCCGGTTTGG TGGATGATGG CATTGCCGCT
ATTGGCAATC GCACTGCTCT 551 TCCCGACCTC ACTGCTTGCC ATTGCCGTGA
TTTGGCTGTT GGATACGCTG 601 CTGTTGTCGC GGATTCCTGT TTTGAGGAGA
TGGTTTAAAT GA
This corresponds to the amino acid sequence <SEQ ID 778; ORF
219>:
TABLE-US-01011 m219.pep 1 MTARLRKCRG FWSLRLCLFQ GRXWAKTALT
LTSRXHWKPS TALRGEIGFK 51 GRYQLNLPKG EDGVWTLSQD SMSYDMISPF
ADRTVHIDQY SGKILADIRF 101 DDYNPFGKFM AASIALHMGT LGWWSVLANV
LFCLAVIFIG ISGCVMWWKR 151 RPTGAVGIVP PAQKVKLPVW WMMALPLLAI
ALLFPTSLLA IAVIWLLDTL 201 LLSRIPVLRR WFK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 219
shows 86.9% identity over a 213 aa overlap with a predicted ORF
(ORF 219.ng) from N. gonorrhoeae:
TABLE-US-01012 m219/g219 10 20 30 40 50 60 m219.pep
MTARLRKCRGFWSLRLCLFQGRXWAKTALTLTSRXHWKPSTALRGEIGFKGRYQLNLPKG
|||||||||||||| ||| ||| |:||||| | : : ||||||||||||||| g219
MTARLRKCRGFWSLCLCLSQGRLWVKTALTPPSPITLETVDRFAREIGFKGRYQLNLPKG 10 20
30 40 50 60 70 80 90 100 110 120 m219.pep
EDGVWTLSQDSMSYDMISPFADRTVHIDQYGKILADIRFDDYNPFGKFMAASIALHMGT
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| g219
EDGVWTLSQDSMSYDMISPFADRTVHIDQYSGEILADIRFDDYNPFGKFMAASIALHMGT 70 80
90 100 110 120 130 140 150 160 170 180 m219.pep
LGWWSVLANVLFCLAVIFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAI
||||||||||:|||||||||||||||||||||:|::||||||||:|||||| |||||| | g219
LGWWSVLANVVFCLAVIFIGISGCVMWWKRRPSGVAGIVPPAQKIKLPVWWAMALPLLLI 130
140 150 160 170 180 190 200 210 m219.pep
ALLFPTSLLAIAVIWLLDTLLLSRIPVLRRWFKX
||||||:||||||||||||||||||||||:||| g219
ALLFPTALLAIAVIWLLDTLLLSRIPVLRKWFK 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 779>:
TABLE-US-01013 a219.seq 1 ATGACGGCAA GGTTAAGGAA GTGCCGTGGG
TTTTGGAGCT TACGCCTATG 51 CCTGTTTCAG GGACGACTGT GGGCAAAGAC
GGTATTAACC CTGACGAGCC 101 GATGACATTG GAAACCGTCG ACCGTTTTGC
GCGG.GAAAT CGGTTTCAAA 151 GGGCGTTATC AGCTGAATTT GCCCAAAGGC
GAGGACGGCG TATGGACTTT 201 GTCGCAGGAT TCTATGAGTT ACGACATGAT
CAGCCCGTTT GCTGACCGCA 251 CGGTGCATAT CGACCAGTAC AGCGGCAAGA
TTCTTGCCGA CATCCGTTTT 301 GACGATTACA ACCCGTTCGG CAAATTTATG
GCGGCAAGCA TTGCGCTGCA 351 TATGGGGACT TTGGGCTGGT GGAGCGTGTT
GGCGAACGTT TTGTTCTGCC 401 TTGCCGTGAT TTTTATCGGC ATCAGCGGCT
GCGTGATGTG GTGGAAACGC 451 CGTCCGTCCG GCGCGGTGGG CATGGTTCCG
CCGGCGCAAA AAATCAAGCT 501 GCCCGTCTGG TGGGCAATGG CGGTGCCGCT
GCTGCTGATT GCATTGCTTT 551 TCCCGACCGC GTTGCTTGCC ATTGCCGTGA
TTTGGCTGTT GGATACGCTG 601 CTGTTGTCGC GGATTCCTGT TTTGAGGAGA
TGGTTTAAAT GA
This corresponds to the amino acid sequence <SEQ ID 780; ORF
219.a>:
TABLE-US-01014 a219.pep 1 MTARLRKCRG FWSLRLCLFQ GRLWAKTVLT
LTSR*HWKPS TVLRXEIGFK 51 GRYQLNLPKG EDGVWTLSQD SMSYDMISPF
ADRTVHIDQY SGKILADIRF 101 DDYNPFGKFM AASIALHMGT LGWWSVLANV
LFCLAVIFIG ISGCVMWWKR 151 RPSGAVGMVP PAQKIKLPVW WAMAVPLLLI
ALLFPTALLA IAVIWLLDTL 201 LLSRIPVLRR WFK* m219/a219 94.8% identity
in 213 aa overlap 10 20 30 40 50 60 m219.pep
MTARLRKCRGFWSLRLCLFQGRXWAKTALTLTSRXHWKPSTALRGEIGFKGRYQLNLPKG
|||||||||||||||||||||| ||||:|||||||||||||:|| ||||||||||||||| a219
MTARLRKCRGFWSLRLCLFQGRLWAKTVLTLTSRXHWKPSTVLRXEIGFKGRYQLNLPKG 10 20
30 40 50 60 70 80 90 100 110 120 m219.pep
EDGVWTLSQDSMSYDMISPFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a219
EDGVWTLSQDSMSYDMISPFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGT 70 80
90 100 110 120 130 140 150 160 170 180 m219.pep
LGWWSVLANVLFCLAVIFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAI
||||||||||||||||||||||||||||||||:||||:||||||:|||||| ||:||| | a219
LGWWSVLANVLFCLAVIFIGISGCVMWWKRRPSGAVGMVPPAQKIKLPVWWAMAVPLLLI 130
140 150 160 170 180 190 200 210 m219.pep
ALLFPTSLLAIAVIWLLDTLLLSRIPVLRRWFKX
||||||:||||||||||||||||||||||||||| a219
ALLFPTALLAIAVIWLLDTLLLSRIPVLRRWFKX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 781>:
TABLE-US-01015 g221.seq 1 atgcacgacc acggcgccat ggatcgccgc
ctccccgctt tcggaagtct 51 gatgcggcga gccgtaaatc adatcgacgc
tgacggattt gaaccctgcc 101 tcacgggcgg catcgatgac ttctttggtt
tcttcgtagc tttggatgcg 151 gttgactgcc gcctgcactt tggggtcgaa
atcctgaatg ccgacgctca 201 tgcggttgaa gccgagtctg ccgagcatga
ggacggtgtc gcggctgact 251 ttgcgcgggt cgatttcgat ggaatattcg
ccggacggta tcagttcgaa 301 atgtttgcgg atcatgcgga agacacgttc
gatctgttcg tcgctcaaaa 351 aggtcggcgt gccgccgccg aagtgcagtt
gggcaagctg gtgccgtccg 401 ttcagatgtg gagcgagcag ttccatttct
ttttcaagat attcgatgta 451 ggtatcggcg cggcttttgt ctttggtgat
gattttgttg cagccgcagt 501 agtagcagat ggtgttgcaa aacggaatgt
gaatgtaaag ggaaagcggt 551 ttgtttaa
This corresponds to the amino acid sequence <SEQ ID 782; ORF
221.ng>:
TABLE-US-01016 g221.pep 1 MHDHGAMDRR LPAFGSLMRR AVNXIDADGF
EPCLTGGIDD FFGFFVALDA 51 VDCRLHFGVE ILNADAHAVE AESAEHEDGV
AADFARVDFD GIFAGRYQFE 101 MFADHAEDTF DLFVAQKGRR AAAEVQLGKL
VPSVQMWSEQ FHFFFKIFDV 151 GIGAAFVFGD DFVAAAVVAD GVAKRNVNVK
GKRFV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 783>:
TABLE-US-01017 m221.seq 1 ATGGyGGTTT TGATGcwcmg AAGTCTGGTG
CGGCAGGCCG TAAATCAAAT 51 CGACGCTGAC GGATTTGAAC CCCGCTTCGC
GCGCCGCATC GATGACTTCT 101 TTGGTTTCTT CGTAACTTTG GATGCGGTTG
ACCGCCGCCT GCACTTTGGG 151 GTCGAAATCC TGAATGCCGA TGCTCATGCG
GTTGAAGCCG AGTCTGCCGA 201 GCATGAGGAC GGTGTCGCGG CTGACTTTGC
GCGGGTCGAT TTCGATGGAG 251 TATTCGCCGG TGGGGATTAA CTCGAAATGT
TTGCGTATCA TGCGGAAGAC 301 ACGTTCGATC TGTTCGTCGC TCAAAAAGGt
GCGTGCcCCG CCGAAGTGCA 351 GTTGGGCAAG CTGGTGCCGT CCGTTCAGAT
GTGGAGCGAG CAGTTCCATT 401 TCTTTTTCAA GATATTCGAT GTAGGCATCG
GCGCGGCTTT TGTCTTTGGT 451 GATGATTTTG TTGCAGCCGC AGTAGTAGCA
GATGGTGTTG CAGAACGGAA 501 TGTGAATGTA AAGGGAAAGC GGTTTGTTTA A
This corresponds to the amino acid sequence <SEQ ID 784; ORF
221>:
TABLE-US-01018 m221.pep 1 MXVLMXRSLV RQAVNQIDAD GFEPRFARRI
DDFFGFFVTL DAVDRRLHFG 51 VEILNADAHA VEAESAEHED GVAADFARVD
FDGVFAGGDX LEMFAYHAED 101 TFDLFVAQKG ACPAEVQLGK LVPSVQMWSE
QFHFFFKIFD VGIGAAFVFG 151 DDFVAAAVVA DGVAERNVNV KGKRFV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 221
shows 87.6% identity over a 170 aa overlap with a predicted ORF
(ORF 221.ng) from N. gonorrhoeae:
TABLE-US-01019 m221/g221 10 20 30 40 50 m221.pep
MXVLMXRSLVRQAVNQIDADGFEPRFARRIDDFFGFFVTLDAVDRRLHFGVE ||:|:|||
|||||||| :: |||||||||:||||| ||||||| g221
MHDHGAMDRRLPAFGSLMRRAVNXIDADGFEPCLTGGIDDFFGFFVALDAVDCRLHFGVE 10 20
30 40 50 60 60 70 80 90 100 110 m221.pep
ILNADAHAVEAESAEHEDGVAADFARVDFDGVFAGGDXLEMFAYHAEDIFDLFVAQKGA-
|||||||||||||||||||||||||||||||:||| :|||| |||||||||||||| g221
ILNADAHAVEAESAEHEDGVAADFARVDFDGIFAGRYQFEMFADHAEDTFDLFVAQKGRR 70 80
90 100 110 120 120 130 140 150 160 170 m221.pep
CPAEVQLGKLVPSVQMWSEQFHFFFKIFDVGIGAAFVFGDDFVAAAVVADGVAERNVNVK
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| g221
AAAEVQLGKLVPSVQMWSEQFHFFFKIFDVGIGAAFVFGDDFVAAAVVADGVAKRNVNVK 130
140 150 160 170 180 m221.pep GKRFVX |||||| g221 GKRFVX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 785>:
TABLE-US-01020 a221.seq 1 ATGGTGGTTT TGATGCTCCG AAGTCTGGTG
CGGCAGGCCG TAAATCAAAT 51 CGACGCTGAC GGATTTGAAC CCCGCTTCGC
GCGCCGCATC GATGACTTCT 101 TTGGTTTCTT CGTAACTTTG GATGCGGTTG
ACCGCCGCCT GCACTTTGGG 151 GTCGAAATCC TGAATGCCGA TGCTCATGCG
GTTGAAGCCG AGTCTGCCGA 201 GCATGAGGAC GGTGTCGCGG CTGACTTTGC
GCGGGTCGAT TTCGATGGAG 251 TATTCGCCGG TGGGGATTAA CTCGAAATGT
TTGCGTATCA TGCGGAAGAC 301 ACGTTCGATT TGGTCGTCGC TCAAAAAGGT
CGGCGTGCCG CCGCCGAAGT 351 GCAGTTGGGC AAGCTGGTGC CGTCCGTTCA
GATGTGGAGC GAGCAGTTCC 401 ATTTCTTTTT CAAGAAATTC GATGTAGGCA
TCGGCGCGGC TTTTGTCTTT 451 GGTGATGATT TTGTTGCAGC CGCAGTAGTA
GCAGATGGTG TTGCAGAACG 501 GAATGTGAAT GTAAAGGGAA AGCGGTTTGT TTAA
This corresponds to the amino acid sequence <SEQ ID 786; ORF
221.a>:
TABLE-US-01021 a221.pep 1 MVVLMLRSLV RQAVNQIDAD GFEPRFARRI
DDFFGFFVTL DAVDRRLHFG 51 VEILNADAHA VEAESAEHED GVAADFARVD
FDGVFAGGD* LEMFAYHAED 101 TFDLVVAQKG RRAAAEVQLG KLVPSVQMWS
EQFHFFFKKF DVGIGAAFVF 151 GDDFVAAAVV ADGVAERNVN VKGKRFV* m221/a221
95.5% identity in 177 aa overlap 10 20 30 40 50 60 m221.pep
MXVLMXRSLVRQAVNQIDADGFEPRFARRIDDFFGFFVTLDAVDRRLHFGVEILNADAHA | |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a221
MVVLMLRSLVRQAVNQIDADGFEPRFARRIDDFFGFFVTLDAVDRRLHFGVEILNADAHA 10 20
30 40 50 60 70 80 90 100 110 119 m221.pep
VEAESAEHEDGVAADFARVDFDGVFAGGDXLEMFAYHAEDTFDLFVAQKGA-CPAEVQLG
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| a221
VEAESAEHEDGVAADFARVDFDGVFAGGDXLEMFAYHAEDTFDLVVAQKGRRAAAEVQLG 70 80
90 100 110 120 120 130 140 150 160 170 m221.pep
KLVPSVQMWSEQFHFFFKIFDVGIGAAFVFGDDFVAAAVVADGVAERNVNVKGKRFVX
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| a221
KLVPSVQMWSEQFHFFFKKFDVGIGAAFVFGDDFVAAAVVADGVAERNVNVKGKRFVX 130 140
150 160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 787>:
TABLE-US-01022 g223.seq 1 atggaattca ggcaccaggt agtggtagtt
ggtgtcgaac catttggtca 51 tttcgatggc gaattggtct ttgttgccgc
gcgccagttg gaagaattgt 101 tccaaaggca ggttttggct atcgaagccg
aaacgggcgg gaatcgcgcc 151 cgtggatact tgcaggtcga ggatgtgatg
gtagaaagtg aaatcacgta 201 cagcaacgta atcagcgtta ggagcagctt
ggtgtttcca gtttttctcg 251 cgcaggtctt tggcaacgtc gagcagctct
tgttcactga tctctttgcg 301 ccagtatttt tcttgggcga atttcaattc
acggaaggcg ccgacacgcg 351 ggaagcctga
This corresponds to the amino acid sequence <SEQ ID 788; ORF
223.ng>:
TABLE-US-01023 g223.pep.. 1 MEFRHQVVVV GVEPFGHFDG ELVFVAARQL
EELFQRQVLA IEAETGGNRA 51 RGYLQVEDVM VESEITYSNV ISVRSSLVFP
VFLAQVFGNV EQLLFTDLFA 101 PVFFLGEFQF TEGADTREA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 789>:
TABLE-US-01024 m223.seq 1 GTGGAATTCA GGCACCAAGT AGTGGTAGTT
GGTGTCGAAC CATTTGGTCA 51 TTTCGATAGC GAATTGGTCT TTGTTACCGC
GCGCCAGTTG GAAGAATTGT 101 TCCAAAGACA GGTTTTGGCT GTCGAAGCCG
AAGCGGGCGG GAATCGCGCC 151 GGTGGCGACT TGCAGGTCGA GGATGTGGTC
GTAGAAAGTG AAATCsCTAC 201 GGCAACGAAA TCGGCGTTGG CAGCGACCTG
GTGTTTCCAG TTTTTCTCGC 251 GCAAGTCTTT AGCAACAGCC AGCAATTCTT
GCTCGCTGAT TTCTTTGCGC 301 CAGTATTTTT CTTGTGCGAA TTTCAATTCG
CGGAAGGCGC CGACACGCGG 351 GAAGCCTGA
This corresponds to the amino acid sequence <SEQ ID 790; ORF
223>:
TABLE-US-01025 m223.pep 1 VEFRHQVVVV GVEPFGHFDS ELVFVTARQL
EELFQRQVLA VEAEAGGNRA 51 GGDLQVEDVV VESEIXYGNE IGVGSDLVFP
VFLAQVFSNS QQFLLADFFA 101 PVFFLCEFQF AEGADTREA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 223
shows 80.7% identity over a 119 aa overlap with a predicted ORF
(ORF 223.ng) from N. gonorrhoeae:
TABLE-US-01026 m223/g223 10 20 30 40 50 60 m223.pep
VEFRHQVVVVGVEPFGHFDSELVFVTARQLEELFQRQVLAVEAEAGGNRAGGDLQVEDVV
:||||||||||||||||||:|||||:||||||||||||||:|||:||||| | ||||||: g223
MEFRHQVVVVGVEPFGHFDGELVFVAARQLEELFQRQVLAIEAETGGNRARGYLQVEDVM 10 20
30 40 50 60 70 80 90 100 110 120 m223.pep
VESEIXYGNEIGVGSDLVFPVFLAQVFSNSQQFLLADFFAPVFFLCEFQFAEGADTREAX
|||||:|:| |:| |:|||||||||||:| :|:|::|:||||||| ||||:||||||||| g223
VESEITYSNVISVRSSLVFPVFLAQVFGNVEQLLFTDLFAPVFFLGEFQFTEGADTREAX 70 80
90 100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 791>:
TABLE-US-01027 a223.seq 1 GTGGAATTCA GGCACCAAGT AGTGGTAGTT
GGTGTCGAAC CATTTGGTCA 51 TTTCGATAGC GAATTGGTCT TTGTTACCGC
GCGCCAGTTG GAAGAATTGT 101 TCCAAAGATA GGTTTTGGCT GTCGAAGCCG
AAGCGGGCGG GAATCGCGCC 151 GGTGGCGACT TGCAGGTCGA GGATGTGGTC
GTAGAAAGTG AAATCGCCTA 201 CGGCAACGTA ATCGGCGTTG GCAGCGGCCT
GGTGTTTCCA GTTTTTCTCG 251 CGCAAGTCTT TAGCAACAGC CAGCAATTCT
TGCTCGCTGA TTTCTTTGCG 301 CCAGTATTTT TCTTGTGCGA ATTTCAATTC
GCGGAAGGCA CCGACACGCG 351 GGAAGCCTGA
This corresponds to the amino acid sequence <SEQ ID 792; ORF
223.a>:
TABLE-US-01028 a223.pep 1 VEFRHQVVVV GVEPFGHFDS ELVFVTARQL
EELFQR*VLA VEAEAGGNRA 51 GGDLQVEDVV VESEIAYGNV IGVGSGLVFP
VFLAQVFSNS QQFLLADFFA 101 PVFFLCEFQF AEGTDTREA* m223/a223 95.8%
identity in 119 aa overlap 10 20 30 40 50 60 m223.pep
VEFRHQVVVVGVEPFGHFDSELVFVTARQLEELFQRQVLAVEAEAGGNRAGGDLQVEDVV
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| a223
VEFRHQVVVVGVEPFGHFDSELVFVTARQLEELFQRXVLAVEAEAGGNRAGGDLQVEDVV 10 20
30 40 50 60 70 80 90 100 110 120 m223.pep
VESEIXYGNEIGVGSDLVFPVFLAQVFSNSQQFLLADFFAPVFFLCEFQFAEGADTREAX |||||
||| ||||| |||||||||||||||||||||||||||||||||||||:|||||| a223
VESEIAYGNVIGVGSGLVFPVFLAQVFSNSQQFLLADFFAPVFFLCEFQFAEGTDTREAX 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 793>:
TABLE-US-01029 g225.seq 1 atggattctt ttttcaaacc ggcagtttgg
gcggttttgt ggctgatgtt 51 tgccgtccgc cccgcccttg ccgacgagtt
gaccaacctg ctcagcagcc 101 gcgagcagat tctcagacag tttgccgaag
acgaacagcc cgttttaccc 151 gtcaaccgag cccccgcccg gcgggcgggc
aatgccgacg aactcatcgg 201 cggcgcgatg gggcttaacg aacagcccgt
tgtacgcgtc aaccgagccn 251 ccgcccggcg ggcgggcaat gccgacaaac
tcatcggcag cgcgatgcgg 301 cttttgggta ttgcctaccg ctacggcggc
acatcggtgt ctaccggttt 351 tgactgcagc ggattcatgc agcacatctt
caaacgcgcc atgggcatca 401 acctgccgcg cacgtcggcg gaacaggcgc
ggatgggcgc acccgttgcc 451 cgaagcgaat tgcagcccgg ggatatggtg
tttttccgca cgctcggcgg 501 cagccgcatt tcccatgtcg gactttatat
cggcaacaac cgcttcatcc 551 acgcgccgcg cacggggaaa aatatcgaaa
tcaccagcct gagccacaaa 601 tattggagcg gcaaatatgc gttcgcccgc
cgggtcaaga aaaacgaccc 651 gtcacgcttt ctgaactga
This corresponds to the amino acid sequence <SEQ ID 794; ORF
225.ng>:
TABLE-US-01030 g225.pep 1 MDSFFKPAVW AVLWLMFAVR PALADELTNL
LSSREQILRQ FAEDEQPVLP 51 VNRAPARRAG NADELIGGAM GLNEQPVVRV
NRAXARRAGN ADKLIGSAMR 101 LLGIAYRYGG TSVSTGFDCS GFMQHIFKRA
MGINLPRTSA EQARMGAPVA 151 RSELQPGDMV FFRTLGGSRI SHVGLYIGNN
RFIHAPRTGK NIEITSLSHK 201 YWSGKYAFAR RVKKNDPSRF LN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 795>:
TABLE-US-01031 m225.seq (partial) 1 ..TTTTCAAACC CGGCAGTTTG
GGCGGTTTTG TGGCTGAwGT TTGCCGTCCG 51 CCCCGCCCTT GCCGACGAGT
TGACCAACCT GCTCAGCAGC CGCGAGCAGA 101 TTCTCAGACA GTTTGCCGAA
GACGAACAGC CCGTTTTACC CATCAACCGA 151 GCCCCCGCCC GGCGGGCGGG
CAATGCCGAC GAACTCATCG GCAGCGCGAT 201 GGGGCTTAAC GAACAGCCCG
TTTTACCCGT CAACCGAGTC CCCGCCCGGC 251 GGGCGGGCAA TGCCGACGAA
CTCATCGGCA ACGCGATGGG GCTTAACGAA 301 CAGCCCGTTT TACCCGTCAA
CCGAGCCCCC GCCCGGCGGG CGGGCAATGC 351 CGACGAACTC ATCGGCAACG
CGATGGGACT TTTGGGTATT GCCTACCGCT 401 ACGGCGGCAC ATCGGTTTCT
ACCGGTTTTG ACTGCAGCGG CTTCATGCAG 451 CACATCTTCA AACGCGCCAT
GGGCATCAAC CTGCCGCGCA CGTCGGCAGA 501 ACAGGCACGG ATGGGTACGC
CGGTTGCCCG AAGCGAATTG CAGCCCGGAG 551 ATATGGTGTT TTTCCGCACG
CTCGGCGGCA GCCGCATTTC CCATGTCGGA 601 CTTTATATCG GCAACAACCG
CTTCATCCAC GCGCCGCGCA CGGGGAAAAA 651 TATCGAAATC ACCAGCCTGA
GCCACAAATA TTGGAGCGGC AAATACGCGT 701 TCGCCCGCCG GGTCAAGAAA
AACGACCCGT CCCGCTTTCT GAACTGA
This corresponds to the amino acid sequence <SEQ ID 796; ORF
225>:
TABLE-US-01032 m225.pep (partial) 1 ..FSNPAVWAVL WLXFAVRPAL
ADELTNLLSS REQILRQFAE DEQPVLPINR 51 APARRAGNAD ELIGSAMGLN
EQPVLPVNRV PARRAGNADE LIGNAMGLNE 101 QPVLPVNRAP ARRAGNADEL
IGNAMGLLGI AYRYGGTSVS TGFDCSGFMQ 151 HIFKRAMGIN LPRTSAEQAR
MGTPVARSEL QPGDMVFFRT LGGSRISHVG 201 LYIGNNRFIH APRTGKNIEI
TSLSHKYWSG KYAFARRVKK NDPSRFLN*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 225
shows 83.5% identity over a 248 aa overlap with a predicted ORF
(ORF 225.ng) from N. gonorrhoeae:
TABLE-US-01033 m225/g225 10 20 30 40 50 m225.pep
FSNPAVWAVLWLXFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRAPARRAG |
:||||||||| ||||||||||||||||||||||||||||||||||:||||||||| g225
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPVNRAPARRAG 10 20
30 40 50 60 60 70 80 90 100 110 m225.pep
NADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNA
||||||| :|||||||||: |||| ||||||| g225
NADELIG-----------------------------GAMGLNEQPVVRVNRAXARRAGNA 70 80
90 120 130 140 150 160 170 m225.pep
DELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGTPVAR
|:|||:|| ||||||||||||||||||||||||||||||||||||||||||||||:|||| g225
DKLIGSAMRLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGAPVAR 100
110 120 130 140 150 180 190 200 210 220 230 m225.pep
SELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g225
SELQPGDMVFFRILGGSRISHVGLYIGNNRFIHAPRIGKNIEITSLSHKYWSGKYAFARR 160
170 180 190 200 210 240 249 m225.pep VKKNDPSRFLNX ||||||||||| g225
VKKNDPSRFLN 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 797>:
TABLE-US-01034 a225.seq 1 ATGGATTCTT TTTTCAAACC GGCAGTTTGG
GCGGTTTTGT GGCTGATGTT 51 TGCCGTCCGC CCCGCCCTTG CCGACGAGTT
GACCAACCTG CTCAGCAGCC 101 GCGAGCAGAT TCTCAGACAG TTTGCCGAAG
ACGAACAGCC CGTTTTACCC 151 ATCAACCGAN CCCCCGCCCG GCGGGCGGGC
AATGCCGACG AACTCATCGG 201 CAGCGCGATG GGGCTTAACG AACAGCCCGT
TTTACCCGTC AACCGANTCC 251 CCGCCCGGCG GGCGGGCAAT GCCGACNAAC
TCATCGGCAA CGCGATGGGG 301 CTTAACGAAC AGCCCGTTTT ACCCGTCAAC
CGAGTCCCCG CCCGGCGGGC 351 GGGCAATGCC GACGAACTCA TCGGCAACGC
GATGGGGCTT AACGAACAGC 401 CCGTTTTACC CGTCAACCGA GCCCCCGCCC
GGCGGGCGGG CAATGCCGAC 451 GAACTCATCG GCAACGCGAT GGGACTTTTG
GGTATTGCCT ACCGCTACGG 501 CGGCACATCG ATTTCTACCG GTTTTGACTG
CAGCGGCTTC ATGCAGCACA 551 TCTTCAAACG CGCCATGGGC ATCAACCTGC
CGCGCACGTC GGCAGAACAG 601 GCGCGGATGG GTACGCCGGT TGCCCGAAGC
GAATTGCAGC CCGGGGATAT 651 GGTGTNTTTC CGCACGCTCG GCGGCAGCCG
CATTTCCCAT GTCGGACTTT 701 ATATCGGCAA CAACCGCTTC ATCCACGCGC
CGCGCACGGG GAAAAATATC 751 GAAATCACCA GCCTGAGCCA CAAATATTGG
AGCGGCAAAT ACGCGTTCGC 801 CCGCCGGGTC AAGAAAAACG ACCCGTCCCG
CTTTCTGAAC TGA
This corresponds to the amino acid sequence <SEQ ID 798; ORF
225.a>:
TABLE-US-01035 a225.pep 1 MDSFFKPAVW AVLWLMFAVR PALADELTNL
LSSREQILRQ FAEDEQPVLP 51 INRXPARRAG NADELIGSAM GLNEQPVLPV
NRXPARRAGN ADXLIGNAMG 101 LNEQPVLPVN RVPARRAGNA DELIGNAMGL
NEQPVLPVNR APARRAGNAD 151 ELIGNAMGLL GIAYRYGGTS ISTGFDCSGF
MQHIFKRAMG INLPRTSAEQ 201 ARMGTPVARS ELQPGDMVXF RTLGGSRISH
VGLYIGNNRF IHAPRTGKNI 251 EITSLSHKYW SGKYAFARRV KKNDPSRFLN *
m225/a225 87.4% identity in 277 aa overlap 10 20 30 40 50 m225.pep
FSNPAVWAVLWLXFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRAPARRAG |
:||||||||| ||||||||||||||||||||||||||||||||||||| |||||| a225
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRXPARRAG 10 20
30 40 50 60 60 70 79 80 m225.pep
NADELIGSAMGLNEQPVLPVNR-----------------------------VPARRAGNA
|||||||||||||||||||||| ||||||||| a225
NADELIGSAMGLNEQPVLPVNRXPARRAGNADXLIGNAMGLNEQPVLPVNRVPARRAGNA 70 80
90 100 110 120 90 100 110 120 130 140 m225.pep
DELIGNAMGLNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGF
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| a225
DELIGNAMGLNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGF 130
140 150 160 170 180 150 160 170 180 190 200 m225.pep
MQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRF
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| a225
MQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVXFRTLGGSRISHVGLYIGNNRF 190
200 210 220 230 240 210 220 230 240 249 m225.pep
IHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFLNX
||||||||||||||||||||||||||||||||||||||||| a225
IHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFLNX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 799>:
TABLE-US-01036 g225-1.seq 1 atggattctt ttttcaaacc ggcagtttgg
gcggttttgt ggctgatgtt 51 tgccgtccgc cccgcccttg ccgacgagtt
gaccaacctg ctcagcagcc 101 gcgagcagat tctcagacag tttgccgaag
acgaacagcc cgttttaccc 151 gtcaaccgag cccccgcccg gcgggcgggc
aatgccgacg aactcatcgg 201 cggcgcgatg gggcttaacg aacagcccgt
tgtacgcgtc aaccgagccn 251 ccgcccggcg ggcgggcaat gccgacaaac
tcatcggcag cgcgatgcgg 301 cttttgggta ttgcctaccg ctacggcggc
acatcggtgt ctaccggttt 351 tgactgcagc ggattcatgc agcacatctt
caaacgcgcc atgggcatca 401 acctgccgcg cacgtcggcg gaacaggcgc
ggatgggcgc acccgttgcc 451 cgaagcgaat tgcagcccgg ggatatggtg
tttttccgca cgctcggcgg 501 cagccgcatt tcccatgtcg gactttatat
cggcaacaac cgcttcatcc 551 acgcgccgcg cacggggaaa aatatcgaaa
tcaccagcct gagccacaaa 601 tattggagcg gcaaatatgc gttcgcccgc
cgggtcaaga aaaacgaccc 651 gtcacgcttt ctgaactga
This corresponds to the amino acid sequence <SEQ ID 800; ORF
225-1.ng>:
TABLE-US-01037 g225-1.pep 1 MDSFFKPAVW AVLWLMFAVR PALADELTNL
LSSREQILRQ FAEDEQPVLP 51 VNRAPARRAG NADELIGGAM GLNEQPVVRV
NRAXARRAGN ADKLIGSAMR 101 LLGIAYRYGG TSVSTGFDCS GFMQHIFKRA
MGINLPRTSA EQARMGAPVA 151 RSELQPGDMV FFRTLGGSRI SHVGLYIGNN
RFIHAPRTGK NIEITSLSHK 201 YWSGKYAFAR RVKKNDPSRF LN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 801>:
TABLE-US-01038 m225-1.seq 1 ATGGATTCTT TTTTCAAACC GGCAGTTTGG
GCGGTTTTGT GGCTGATGTT 51 TGCCGTCCGC CCCGCCCTTG CCGACGAGTT
GACCAACyTG CTCAGCAGCC 101 GCGAGCAGAT TCTCAGACAG TTTGCCGAAG
ACGAACAGCC CGTTTTACCC 151 ATCAACCGAG CCCCCGCCCG GCGGGCGGGC
AATGCCGACG AACTCATCGG 201 CAGCGCGATG GGGCTTAACG AACAGCCCGT
TTTACCCGTC AACCGAGTCC 251 CCGCCCGGCG GGCGGGCAAT GCCGACGAAC
TCATCGGCAA CGCGATGGGG 301 CTTAACGAAC AGCCCGTTTT ACCCGTCAAC
CGAGCCCCCG CCCGGCGGGC 351 GGGCAATGCC GACGAACTCA TCGGCAACGC
GATGGGACTT TTGGGTATTG 401 CCTACCGCTA CGGCGGCACA TCGGTTTCTA
CCGGTTTTGA CTGCAGCGGC 451 TTCATGCAGC ACATCTTCAA ACGCGCCATG
GGCATCAACC TGCCGCGCAC 501 GTCGGCAGAA CAGGCACGGA TGGGTACGCC
GGTTGCCCGA AGCGAATTGC 551 AGCCCGGAGA TATGGTGTTT TTCCGCACGC
TCGGCGGCAG CCGCATTTCC 601 CATGTCGGAC TTTATATCGG CAACAACCGC
TTCATCCACG CGCCGCGCAC 651 GGGGAAAAAT ATCGAAATCA CCAGCCTGAG
CCACAAATAT TGGAGCGGCA 701 AATACGCGTT CGCCCGCCGG GTCAAGAAAA
ACGACCCGTC CCGCTTTCTG 751 AACTGA
This corresponds to the amino acid sequence <SEQ ID 802; ORF
217>:
TABLE-US-01039 m225-1.pep 1 MDSFFKPAVW AVLWLMFAVR PALADELTNL
LSSREQILRQ FAEDEQPVLP 51 INRAPARRAG NADELIGSAM GLNEQPVLPV
NRVPARRAGN ADELIGNAMG 101 LNEQPVLPVN RAPARRAGNA DELIGNAMGL
LGIAYRYGGT SVSTGFDCSG 151 FMQHIFKRAM GINLPRTSAE QARMGTPVAR
SELQPGDMVF FRTLGGSRIS 201 HVGLYIGNNR FIHAPRTGKN IEITSLSHKY
WSGKYAFARR VKKNDPSRFL 251 N* m225-1/g225-1 84.9% identity in 251 aa
overlap 10 20 30 40 50 60 m225-1.pep
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRAPARRAG
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g225-1
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPVNRAPARRAG 10 20
30 40 50 60 70 80 90 100 110 120 m225-1.pep
NADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNA ||||
|||:|||||||||: |||| ||||||| g225-1
NADE-----------------------------LIGGAMGLNEQPVVRVNRAXARRAGNA 70 80
90 130 140 150 160 170 180 m225-1.pep
DELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGTPVAR
|:|||:|| ||||||||||||||||||||||||||||||||||||||||||||||:|||| g225-1
DKLIGSAMRLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGAPVAR 100
110 120 130 140 150 190 200 210 220 230 240 m225-1.pep
SELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g225-1
SELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARR 160
170 180 190 200 210 250 m225-1.pep VKKNDPSRFLNX |||||||||||| g225-1
VKKNDPSRFLNX 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 803>:
TABLE-US-01040 a225-1.seq 1 ATGGATTCTT TTTTCAAACC GGCAGTTTGG
GCGGTTTTGT GGCTGATGTT 51 TGCCGTCCGC CCCGCCCTTG CCGACGAGTT
GACCAACCTG CTCAGCAGCC 101 GCGAGCAGAT TCTCAGACAG TTTGCCGAAG
ACGAACAGCC CGTTTTACCC 151 ATCAACCGAN CCCCCGCCCG GCGGGCGGGC
AATGCCGACG AACTCATCGG 201 CAGCGCGATG GGGCTTAACG AACAGCCCGT
TTTACCCGTC AACCGANTCC 251 CCGCCCGGCG GGCGGGCAAT GCCGACNAAC
TCATCGGCAA CGCGATGGGG 301 CTTAACGAAC AGCCCGTTTT ACCCGTCAAC
CGAGTCCCCG CCCGGCGGGC 351 GGGCAATGCC GACGAACTCA TCGGCAACGC
GATGGGGCTT AACGAACAGC 401 CCGTTTTACC CGTCAACCGA GCCCCCGCCC
GGCGGGCGGG CAATGCCGAC 451 GAACTCATCG GCAACGCGAT GGGACTTTTG
GGTATTGCCT ACCGCTACGG 501 CGGCACATCG ATTTCTACCG GTTTTGACTG
CAGCGGCTTC ATGCAGCACA 551 TCTTCAAACG CGCCATGGGC ATCAACCTGC
CGCGCACGTC GGCAGAACAG 601 GCGCGGATGG GTACGCCGGT TGCCCGAAGC
GAATTGCAGC CCGGGGATAT 651 GGTGTNTTTC CGCACGCTCG GCGGCAGCCG
CATTTCCCAT GTCGGACTTT 701 ATATCGGCAA CAACCGCTTC ATCCACGCGC
CGCGCACGGG GAAAAATATC 751 GAAATCACCA GCCTGAGCCA CAAATATTGG
AGCGGCAAAT ACGCGTTCGC 801 CCGCCGGGTC AAGAAAAACG ACCCGTCCCG
CTTTCTGAAC TGA
This corresponds to the amino acid sequence <SEQ ID 804; ORF
225-1.a>:
TABLE-US-01041 a225-1.pep 1 MDSFFKPAVW AVLWLMFAVR PALADELTNL
LSSREQILRQ FAEDEQPVLP 51 INRXPARRAG NADELIGSAM GLNEQPVLPV
NRXPARRAGN ADXLIGNAMG 101 LNEQPVLPVN RVPARRAGNA DELIGNAMGL
NEQPVLPVNR APARRAGNAD 151 ELIGNAMGLL GIAYRYGGTS ISTGFDCSGF
MQHIFKRAMG INLPRTSAEQ 201 ARMGTPVARS ELQPGDMVXF RTLGGSRISH
VGLYIGNNRF IHAPRTGKNI 251 EITSLSHKYW SGKYAFARRV KKNDPSRFLN *
a225-1/m225-1 88.6% identity in 280 aa overlap 10 20 30 40 50 60
a225-1.pep
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRXPARRAG
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| m225-1
MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAEDEQPVLPINRAPARRAG 10 20
30 40 50 60 70 80 90 100 110 120 a225-1.pep
NADELIGSAMGLNEQPVLPVNRXPARRAGNADXLIGNAMGLNEQPVLPVNRVPARRAGNA
|||||||||||||||| ||||||||||||||| m225-1
NADELIGSAMGLNEQP-----------------------------VLPVNRVPARRAGNA 70 80
90 130 140 150 160 170 180 a225-1.pep
DELIGNAMGLNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGF
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| m225-1
DELIGNAMGLNEQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGF 100
110 120 130 140 150 190 200 210 220 230 240 a225-1.pep
MQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVXERTLGGSRISHVGLYIGNNRF
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| m225-1
MQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMVFERTLGGSRISHVGLYIGNNRF 160
170 180 190 200 210 250 260 270 280 a225-1.pep
IHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFLNX
||||||||||||||||||||||||||||||||||||||||| m225-1
IHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPSRFLNX 220 230 240 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 805>:
TABLE-US-01042 g226.seq 1 ATGAGCGAAA TCCTCAGGCA GCCCAGCGTT
CTGCTTTTCC TCACGCTTGC 51 CGTGTACGCG CTTGCGATTA TCGTGCGCAC
GCGCACGGGC AATATCTTCT 101 GCAACCCCGT ACTCGTCAGC ACTATCGTGC
TGATTGCCTA CCTGAAAATC 151 CTCGGTATCG ATTATGCGGT GTACCACAAC
GCCGCGCAAT TCATTGATTT 201 TCGGCTGAAA cccGccgtCG TCGTGCTTGC
CGTGCCGCTC TACCAAAACC 251 GCCGTAAAAT CTTCAACCAG TGGCTGCCCG
TCATCGTTTC GCAGCTTGCG 301 GGCAGCGTTA cggGCATTGT tacggggATG
TATTTTgccg cttggctcgg 351 gccggatacc caattctcct tcccgcctcg
tcttcaatat ctgttattta 401 caccctctgg aatcccaatt cacaccctgt
atgcgcgggt tctcccgcca 451 tttctgttgc ctccgcctct cctgccgcgc
ctcggcccgc atacattgcg 501 ccggttcaca atacttccaa aaaaactacg
gccgtttaag cccctcctcc 551 cagttgtggt cctttctcct Ccgggcctcg
cccctcccct cttataa
This corresponds to the amino acid sequence <SEQ ID 806; ORF
226.ng>:
TABLE-US-01043 g226.pep 1 MSEILRQPSV LLFLTLAVYA LAIIVRTRTG
NIFCNPVLVS TIVLIAYLKI 51 LGIDYAVYHN AAQFIDFRLK PAVVVLAVPL
YQNRRKIFNQ WLPVIVSQLA 101 GSVTGIVTGM YFAAWLGPDT QFSFPPRLQY
LLFTPSGIPI HTLYARVLPP 151 FLLPPPLLPR LGPHTLRRFT ILPKKLRPFK
PLLPVVVLSP PGLAPPLL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 807>:
TABLE-US-01044 m226.seq 1 ATGAACGAAA TCCTCAGGCA GCCCAGCGTT
CTGCTTTTCC TCACGCTTGC 51 CGTGTACGCG CTTGCGATTA TCGtGCGCAC
GCGCACGGGC AATATCTTCT 101 GCAACCCCGT ACTCGTCAGC ACTATCGTGC
TGATTGCCTA CCTGAAAATC 151 CTCGGTATCG ATTATGCGGT GTACCACAAC
GCCGCGCAAT TCATTGATTT 201 TTGGCTGAAA CCCGCCGTCG TCGTGCTTGC
CGTGCCGCTC TACCAAAACC 251 GCCGTAAAAT CTTCAACCAG TGGCTGCCCG
TCATCGTTTC ACAGCTTGCG 301 GGCAGCGTTA CGGGCATTGT TACAGGGATG
TATTTTGCCA AATGGCTGGG 351 CGCGGAACGC GAAGTCGTCC TCTCGCTCGC
GTCCAAATCT GTTACCAACC 401 CCATCGCTAT TGAAATCACC CGCTCCATCG
GCGGCATTCC CGCCATTACC 451 GCCGCCACCG TCATCATTGC CGGTCTGGTC
GGACAGATTG CCGGTTACAA 501 AATGCTGAAG AACACGGTCG TCATGCCCTC
GTCCGTGGGT ATGTCGCTCG 551 GCACGGCTTC GCACGCGATG GGGATTGCCG
CCTCGCTCGA ACGCAGCCGC 601 CGTATGGCGG CATACGCGGG GCTGGGGCTG
ACGTTCAACG GCGTACTGAC 651 CGCGCTGATT GCGCCGCTGC TCATCCCCGT
TTTGGGATTT TGA
This corresponds to the amino acid sequence <SEQ ID 808; ORF
226>:
TABLE-US-01045 m226.pep 1 MNEILRQPSV LLFLTLAVYA LAIIVRTRTG
NIFCNPVLVS TIVLIAYLKI 51 LGIDYAVYHN AAQFIDFWLK PAVVVLAVPL
YQNRRKIFNQ WLPVIVSQLA 101 GSVTGIVTGM YFAKWLGAER EVVLSLASKS
VTNPIAIEIT RSIGGIPAIT 151 AATVIIAGLV GQIAGYKMLK NTVVMPSSVG
MSLGTASHAM GIAASLERSR 201 RMAAYAGLGL TFNGVLTALI APLLIPVLGF *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 226
shows 94.2% identity over a 121 aa overlap with a predicted ORF
(ORF 226.ng) from N. gonorrhoeae:
TABLE-US-01046 m226/g226 10 20 30 40 50 60 m226.pep
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILGIDYAVYHN
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g226
MSEILRQPSVLLFLTLAVYALAIIVRTRIGNIFCNPVLVSTIVLIAYLKILGIDYAVYHN 10 20
30 40 50 60 70 80 90 100 110 120 m226.pep
AAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAER
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| : g226
AAQFIDFRLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAAWLGPDT 70 80
90 100 110 120 130 140 150 160 170 180 m226.pep
EVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLVGQIAGYKMLKNTVVMPSSVG : g226
QFSFPPRLQYLLFTPSGIPIHTLYARVLPPFLLPPPLLPRLGPHTLRRFTILPKKLRPFK 130
140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 809>:
TABLE-US-01047 a226.seq 1 ATGAACGAAA TCCTCAGGCA GCCGAGCATC
CTGCTTTTCC TCACGCTTGC 51 CGTGTACGCG CTTGCGATTA TCGTGCGCAC
GCGCACGGGT AATATCTTCT 101 GCAACCCCGT ACTCGTCAGC ACTATCGTGC
TGATTGCCTA CCTGAAAATC 151 CTCGGTATCG ATTATGCGGT GTACCACAAC
GCCGCGCAGT TTATCGATTT 201 CTGGCTCAAG CCCGCCGTCG TCGTGCTTGC
CGTGCCGCTC TACCAAAACC 251 GCCGTAAAAT CTTCAACCAA TGGCTGCCCG
TCATCGTTTC GCAGCTTGCG 301 GGCAGCGTTA CGGGCATTGT TACGGGGATG
TATTTTGCCA AATGGCTGGG 351 CGCGGAACGC GAAGTCGTCC TCTCGCTCGC
GTCCAAATCT GTTACCAATC 401 CTATCGCCAT CGAAATCACC CGCTCCATCG
GCGGCATTCC CGCCATTACC 451 GCCGCCACCG TCATCATTGC CGGCCTGGTC
GGACAGATTG CCGGTTACAA 501 AATGTTGAAA AACACGGTCG TTATGCCCTC
ATCTGTCGGA ATGTCGCTCG 551 GCACGGCTTC GCACGCGATG GGCATTGCCG
CCTCGCTCGA ACGCAGCCGC 601 CGCATGGCGG CATACGCGGG GCTGGGGCTG
ACGTTCAACG GCGTACTGAC 651 CGCGCTGATT GCGCCGCTGC TTATCCCCGT
TTTGGGATTT TGA
This corresponds to the amino acid sequence <SEQ ID 810; ORF
226.a>:
TABLE-US-01048 a226.pep 1 MNEILRQPSI LLFLTLAVYA LAIIVRTRTG
NIFCNPVLVS TIVLIAYLKI 51 LGIDYAVYHN AAQFIDFWLK PAVVVLAVPL
YQNRRKIFNQ WLPVIVSQLA 101 GSVTGIVTGM YFAKWLGAER EVVLSLASKS
VTNPIAIEIT RSIGGIPAIT 151 AATVIIAGLV GQIAGYKMLK NTVVMPSSVG
MSLGTASHAM GIAASLERSR 201 RMAAYAGLGL TFNGVLTALI APLLIPVLGF *
m226/a226 99.6% identity in 230 aa overlap 10 20 30 40 50 60
m226.pep
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILGIDYAVYHN
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| a226
MNEILRQPSILLFLTLAVYALAIIVRTRIGNIFCNPVLVSTIVLIAYLKILGIDYAVYHN 10 20
30 40 50 60 70 80 90 100 110 120 m226.pep
AAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a226
AAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAER 70 80
90 100 110 120 130 140 150 160 170 180 m226.pep
EVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLVGQIAGYKMLKNTVVMPSSVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a226
EVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLVGQIAGYKMLKNTVVMPSSVG 130
140 150 160 170 180 190 200 210 220 230 m226.pep
MSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGFX
||||||||||||||||||||||||||||||||||||||||||||||||||| a226
MSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGFX 190 200 210 220
230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 811>:
TABLE-US-01049 g227.seq 1 atgaacatca tccgcgcgct cctcatcatc
ctcggctgcc tcgccgccgg 51 cgaaaccgcc gttttcctag caggcatcaa
actgcccggc agcatcgtcg 101 gcatgggcgt gctgtttgcg cttttgcagg
cgggttggct caaaacgtct 151 tggctgcaac agcttaccga cgcgctgatg
gcaaacctga cgctgttcct 201 cgtgccgccc tgcgtggcgg tcatcagcta
tttggatttg attgccgacg 251 attggttttc gatactggtt tccgcctccg
ccagcacttt gtgcgtactg 301 ctggttacgg gcaaggttca ccgctggata
cggagcatta tctga
This corresponds to the amino acid sequence <SEQ ID 812; ORF
227.ng>:
TABLE-US-01050 g227.pep 1 MNIIRALLII LGCLAAGETA VFLAGIKLPG
SIVGMGVLFA LLQAGWLKTS 51 WLQQLTDALM ANLTLFLVPP CVAVISYLDL
IADDWFSILV SASASTLCVL 101 LVTGKVHRWI RSII*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 813>:
TABLE-US-01051 m227.seq (partial) 1 ..ACGTCTTkGC TGCAACAGCT
TACCGACGCG CTGATGTCGA ACCTGACGCT 51 GTtCCTCGTG CCgCC.TGCG
TGGCGGTCAT CAGCTATTTG GATTTGATTG 101 CCGACGATTG GTTTTCGATA
CTGGTTTCCG CCTCCGCCAG cACTTTGTGC 151 GTACTGCTGG TTACGGGCAA
AGTCCACCGG TGGATACGGG GTATTATCCG 201 ATGA
This corresponds to the amino acid sequence <SEQ ID 814; ORF
227>:
TABLE-US-01052 m227.pep (partial) 1 ..TSXLQQLTDA LMSNLTLFLV
PPCVAVISYL DLIADDWFSI LVSASASTLC 51 VLLVTGKVHR WIRGIIR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 227
shows 95.5% identity over a 66 aa overlap with a predicted ORF (ORF
227.ng) from N. gonorrhoeae:
TABLE-US-01053 m227/g227 10 20 30 m227.pep
TSXLQQLTDALMSNLTLFLVPPCVAVISYL || |||||||||:||||||||||||||||| g227
TAVFLAGIKLPGSIVGMGVLFALLQAGWLKTSWLQQLTDALMANLTLFLVPPCVAVISYL 20 30
40 50 60 70 40 50 60 m227.pep
DLIADDWFSILVSASASTLCVLLVTGKVHRWIRGIIRX
|||||||||||||||||||||||||||||||||||| g227
DLIADDWFSILVSASASTLCVLLVTGKVHRWIRSIIX 80 90 100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 815>:
TABLE-US-01054 a227.seq 1 ATGAACATCA TCCGCGCGCT CCTCATCATC
CTCGGCTGCC TCGCCACCGG 51 CGAAACCGCC GTTTTCCTAG CAGGCATCAA
ACTGCCCGGC AGCATCGTCG 101 GCATGGGCGT ACTGTTTGCG CTTTTGCAGG
CGGGTTGGGT CAAAACGTCT 151 TGGCTGCAAC AGCTTACCGA CGCGCTGATG
GCGAATCTGA CGTTGTTTCT 201 CGTGCCGCCC TGCGTGGCGG TCATCAGCTA
TTTGGATTTG ATTGCCGACG 251 ATTGGTTTTC GATACTGGTT TCCGCCTCCG
CCAGCACTTT GTGCGTACTG 301 CTGGTTACAG GCAAGGTTCA CCGCTGGATA
CGGAGCATTA TCTGA
This corresponds to the amino acid sequence <SEQ ID 816; ORF
227.a>:
TABLE-US-01055 a227.pep 1 MNIIRALLII LGCLATGETA VFLAGIKLPG
SIVGMGVLFA LLQAGWVKTS 51 WLQQLTDALM ANLTLFLVPP CVAVISYLDL
IADDWFSILV SASASTLCVL 101 LVTGKVHRWI RSII* m227/a227 95.5% identity
in 66 aa overlap 10 20 30 m227.pep TSXLQQLTDALMSNLTLFLVPPCVAVISYL
|| |||||||||:||||||||||||||||| a227
TAVFLAGIKLPGSIVGMGVLFALLQAGWVKISWLQQLTDALMANLTLFLVPPCVAVISYL 20 30
40 50 60 70 40 50 60 m227.pep
DLIADDWFSILVSASASTLCVLLVTGKVHRWIRGIIRX
|||||||||||||||||||||||||||||||||:|| a227
DLIADDWFSILVSASASTLCVLLVTGKVHRWIRSIIX 80 90 100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 817>:
TABLE-US-01056 m228.seq 1 ATGAAAAAAT TATTGATTGC CGCAATGATG
GCGGCTGCCT TGGCAGCTTG 51 TTCGCAAGAA GCCAAACAGG AGGTTAAGGA
AGCGGTTCAA GCCGTTGAGT 101 CCGATGTTAA AGACACTGCG GCTTCTGCCG
CCGAGTCTGC CGCTTCTGCC 151 GTCGAAGAAG CGAAAGACCA AGTCAAAGAT
GCTGCGGCTG ATGCAAAGGC 201 AAGTGCCGAG GAAGCTGTAA CTGAAGCCAA
AGAAGCTGTA ACTGAAGCAG 251 CTAAAGATAC TTTGAACAAA GCTGCCGACG
CGACTCAGGA AGCGGCAGAC 301 AAAATGAAAG ATGCCGCCAA ATAA
This corresponds to the amino acid sequence <SEQ ID 818; ORF
228>:
TABLE-US-01057 m228.pep 1 MKKLLIAAMM AAALAACSQE AKQEVKEAVQ
AVESDVKDTA ASAAESAASA 51 VEEAKDQVKD AAADAKASAE EAVTEAKEAV
TEAAKDTLNK AADATQEAAD 101 KMKDAAK*
Computer analysis of this amino acid sequence gave the following
results: The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 819>:
TABLE-US-01058 a228.seq 1 ATGAAAAAAT TATTGATTGC CGCAATGATG
GCGGCTGCCT TGGCAGCTTG 51 TTCGCAAGAA GCCAAACAGG AGGTTAAGGA
AGCGGTTCAA GCCGTTGAGT 101 CCGATGTTAA AGACACTGCG GCTTCTGCCG
CCGAGTCTGC CGCTTCTGCC 151 GTCGAAGAAG CGAAAGACCA AGTCAAAGAT
GCTGCGGCTG ATGCAAAGGC 201 AAGTGCCGAG GAAGCTGTAA CTGAAGCCAA
AGAAGCTGTA ACTGAAGCAG 251 CTAAAGATAC TTTGAACAAA GCTGCCGACG
CGACTCAGGA AGCGGCAGAC 301 AAAATGAAAG ATGCCGCCAA ATAA
This corresponds to the amino acid sequence <SEQ ID 820; ORF
228.a>:
TABLE-US-01059 a228.pep 1 MKKLLIAAMM AAALAACSQE AKQEVKEAVQ
AVESDVKDTA ASAAESAASA 51 VEEAKDQVKD AAADAKASAE EAVTEAKEAV
TEAAKDTLNK AADATQEAAD 101 KMKDAAK* m228/a228 100.0% identity in 107
aa overlap 10 20 30 40 50 60 m228.pep
MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAAESAASAVEEAKDQVKD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a228
MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAAESAASAVEEAKDQVKD 10 20
30 40 50 60 70 80 90 100 m228.pep
AAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKMKDAAKX
|||||||||||||||||||||||||||||||||||||||||||||||| a228
AAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKMKDAAKX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 821>:
TABLE-US-01060 g229.seq 1 atggctgccg tatcgggcgg cggtgcggtc
ttcctgataa tgcttccaca 51 tattgcccgc gttcagcgtc agccgccagc
gttcgcccaa gcgtcgggag 101 aaatcggcat tgaagccgcc ggcgaaattg
tatcggctgc cgcccaagag 151 gttttgcccg acaaacggca cggtgccgaa
cgagcgcgtt accgaacggt 201 tttgatggcc gaacgacagg cgcaggttct
gttcgctgaa atctttgtta 251 tcccaataat gcacgccgcg gctgatgccg
ccgtagagga aatgatgccc 301 gcccgcattg atttcgcgcg acacgcccaa
gccgtagcgc aaaccgtgtg 351 ccttttgcgg caggctgtcg gcggttttcg
tccagcttct gcccgcaaat 401 tcaatcgttt tttcggacga agcgttgttt
atagcggatt aacaaaaatc 451 aggacaaggc ggcgggccgc aggcagtacg
gatggtacgg aaccggttcg 501 cccggtgctt ggacgcctta gggaaccgtt
ccctttgagc cggggcgggg 551 caacccgtac cggtttttgt tcatccgcca
tattgtgttg a
This corresponds to the amino acid sequence <SEQ ID 822; ORF
229.ng>:
TABLE-US-01061 g229.pep 1 MAAVSGGGAV FLIMLPHIAR VQRQPPAFAQ
ASGEIGIEAA GEIVSAAAQE 51 VLPDKRHGAE RARYRTVLMA ERQAQVLFAE
IFVIPIMHAA ADAAVEEMMP 101 ARIDFARHAQ AVAQTVCLLR QAVGGFRPAS
ARKFNRFFGR SVVYSGLTKI 151 RTRRRAAGST DGTEPVRPVL GRLREPFPLS
RGGATRTGFC SSAILC*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 823>:
TABLE-US-01062 m229.seq (partial) 1 ..GCTCAAGCGT TGGGAGAAAT
CGGCATTGAA GCCGCCGACG AAATTGTATC 51 GGCTGCCGCC TAAGAGGTTT
TGCTCGACAA ACGGCACGAT GCCGAACGAG 101 CGCGTTACCG AACGGTTTTT
ATAGCCGAAC GACAGGCGCA GGCTCTGTTC 151 GCTGAAATCT TTGTTATCCC
AATAATGCAC GCCGCCGCCG CTGATGCCGC 201 CGTAGAGGAA ATGATGCCTG
CCCGCATTGA TTTCGCGCGA CACGCCTAAG 251 CCCTAGCGCA AACCGTGTGC
CTTTTGCGGC AGGCTGTCGG CGGTTTTCGT 301 CCAGCTTCTG CCCGCAAATT
CAATCGTTTT TTCGGACGAA GCGTTGTTTA 351 TAGCGGATTA ACAAAAATCA
GGACAAGGCA ACGAAGCCGC AGACAGTACA 401 AATAGTACGG AACCGATTCA
CTTGGTGCTT CAGCACcTTA GAGAATCGTT 451 CTCTTTTTTG TTCATCCGCT
ATATTGTGTT GA
This corresponds to the amino acid sequence <SEQ ID 824; ORF
229>:
TABLE-US-01063 m229.pep (partial) 1 ..AQALGEIGIE AADEIVSAAA
XEVLLDKRHD AERARYRTVF IAERQAQALF 51 AEIFVIPIMH AAAADAAVEE
MMPARIDFAR HAXALAQTVC LLRQAVGGFR 101 PASARKFNRF FGRSVVYSGL
TKIRTRQRSA DSTNSTEPIH LVLQHLRESR 151 SLFCSSAILC *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 229
shows 80.5% identity over a 169 aa overlap with a predicted ORF
(ORF 229.ng) from N. gonorrhoeae:
TABLE-US-01064 m229/g209 10 20 30 m229.pep
AQALGEIGIEAADEIVSAAAXEVLLDKRHDAE ||| |||||||| ||||||| ||| |||| ||
g229 MAAVSGGGAVFLIMLPHIARVQRQPPAFAQASGEIGIEAAGEIVSAAAQEVLPDKRHGAE
10 20 30 40 50 60 40 50 60 70 80 90 m229.pep
RARYRTVFIAERQAQALFAEIFVIPIMHAAAADAAVEEMMPARIDFARHAXALAQTVCLL
|||||||::||||||:||||||||||||||| |||||||||||||||||| |:||||||| g229
RARYRTVLMAERQAQVLFAEIFVIPIMHAAA-DAAVEEMMPARIDFARHAQAVAQTVCLL 70 80
90 100 110 100 110 120 130 140 m229.pep
RQAVGGFRPASARKFNRFFGRSVVYSGLIKIRTRQRSADSINSTEPIHLVLQHLRE----
||||||||||||||||||||||||||||||||||:|:| ||::|||:: || :||| g229
RQAVGGFRPASARKFNRFFGRSVVYSGLTKIRTRRRAAGSTDGTEPVRPVLGRLREPFPL 120
130 140 150 160 170 150 160 m229.pep -----SRSLFCSSAILCX :|:
|||||||| g229 SRGGATRTGFCSSAILC 180 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 825>:
TABLE-US-01065 a229.seq (partial) 1 ATGGCTGTCG TATCGGGCGG
CGGTGCGGTC TTCCTGATAA CGCTTCCACA 51 TATTGCCCAC GTTCAGCGTC
AGCCGCCA.. GTTCGCTCAA GCGTCGGGAG 101 AAATCGGCAT TGAAGCCGCC
GACGAAATTG TATCGGCTGC CGCCTAAGAG 151 GTTTTGCTCG ATAAACGGCA
CGATGCCGAA TGAGCGCGTT ACTGAACGGT 201 TTTTATAGCC GAGCGACAGG
CGCAGGCTCT GTTCGCTGAA ATCTTTGTTA 251 TCCTAATAGT GCACGCCGCC
GCCGCTGATG TCTCCGTAGA GGAAATGATG 301 CCCGCCCGCA TTGATTTCGC
GCGACACGCC CAAGCCGTAG CGCAAACCGT 351 GTGCCTTTTG CGGCAGGCTG
TCGGCGGTTT TCGTCCAGCT TCTGCCTGCA 401 AATTCAATCG TTTTTTCGGA
CGAAGCGTTG TTTATAGCGG ATTAACAAAA 451 ATCAGGACAA GGCGACGAAG
CGCAGACAGT ACAGATAGTA CGGAACCGAT 501 TCACTTGGTG CTTCAGCACC
TTAGAGAATC GTCTCTTTGA GCTAAGGCGA 551 GGCAACGCCG TACTGGTTTT
TGTTCATCCA CTATA
This corresponds to the amino acid sequence <SEQ ID 826; ORF
229.a>:
TABLE-US-01066 a229.pep (partial) 1 MAVVSGGGAV FLITLPHIAH
VQRQPPXFAQ ASGEIGIEAA DEIVSAAA*E 51 VLLDKRHDAE *ARY*TVFIA
ERQAQALFAE IFVILIVHAA AADVSVEEMM 101 PARIDFARHA QAVAQTVCLL
RQAVGGFRPA SACKFNRFFG RSVVYSGLTK 151 IRTRRRSADS TDSTEPIHLV
LQHLRESSL* AKARQRRTGF CSSTI m229/a229 85.6% identity in 167 aa
overlap 10 20 30 m229.pep AQALGEIGIEAADEIVSAAAXEVLLDKRHDAE |||
|||||||||||||||||||||||||||| a229
MAVVSGGGAVFLITLPHIAHVQRQPPXFAQASGEIGIEAADEIVSAAAXEVLLDKRHDAE 10 20
30 40 50 60 40 50 60 70 80 90 m229.pep
RARYRTVFIAERQAQALFAEIFVIPIMHAAAADAAVEEMMPARIDFARHAXALAQTVCLL |||
||||||||||||||||||| |:||||||::||||||||||||||| |:||||||| a229
XARYXTVFIAERQAQALFAEIFVILIVHAAAADVSVEEMMPARIDFARHAQAVAQTVCLL 70 80
90 100 110 120 100 110 120 130 140 149 m229.pep
RQAVGGFRPASARKFNRFFGRSVVYSGLIKIRTRQRSADSINSTEPIHLVLQHLRES---
|||||||||||| |||||||||||||||||||||:||||||:||||||||||||||| a229
RQAVGGFRPASACKFNRFFGRSVVYSGLTKIRTRRRSADSTDSTEPIHLVLQHLRESSLX 130
140 150 160 170 180 150 160 m229.pep ------RSLFCSSAILCX |: ||||:|
a229 AKARQRRTGFCSSTI 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 827>:
TABLE-US-01067 g230.seq 1 atgttccatt ccatcgaaaa atacagaaca
cccgcccaag tcttattagg 51 cctgattgca ttaacttttg tcggcttcgg
cgtcagcacg gtttcccatc 101 cgggcgccga ctacatcgtc caagtgggcg
acgaaaaaat cagcgagcac 151 tcaatcaaca acgccatgca gaacgagcag
gcggacggcg gcagcccttg 201 gcgcgacgcg gtgttccaat ccctgctgca
acgcgcctac ctgaaacagg 251 gcgcgaagct gatgggcatt tcggtttctt
ccgaacaaat caagcagatg 301 attgtggacg atcccaattt ccacgacgca
aacggcaaat tcagtcacgc 351 gcttttgagt caatacctgt cgcaacgcca
tatgtctgaa gaccagtttg 401 tcgaagaaat ccgcgatcag tttgccttgc
agaatttggt aagcctcgtc 451 caaaacggcg tattggtcgg cgacgcgcag
gcggaacagc tgatcaggct 501 gacgcaggtc aaccgcacca tccgttcgca
cactttcaac cccgacgagt 551 tcatcgccca agtcaaagcg tctgaagccg
atttgcagaa attttataat 601 gcgaacaaaa aagactatct gctgccgcag
gcggtcaaat tggaatatgt 651 cgccttgaat ctgaaggatt ttgcagacaa
gcagaccgtc agtgaaacgg 701 aagtgaaaaa tgcgtttgaa gagcgcgtgg
cgcgtttgcc ggcacatgaa 751 gccaaacctt ctttcgagca ggaaaaagcc
gccgtcgaaa acgaattgaa 801 aatgaaaaag gcggttgccg acttcaacaa
ggcaaaagaa aagctgggcg 851 acgatgcgtt caatcatccc tcctcgcttg
ccgaagccgc caaaaacagc 901 ggtttgaaag tggaaaccca agaaacttgg
ctgagcaggc aggacgcaca 951 aatgtccggc atgcccgaaa acctaatcaa
tgccgtattc agcgacgacg 1001 tattgaagaa aaaacacaat tccgaagtgc
tgaccatcaa cagcgaaacc 1051 gcgtgggtcg tccgcgccaa agaagtccgc
gaagaaaaaa acctactgtt 1101 tgaagaagcc aaagatgcgg tgcgtcaggc
ctatatccgt accgaagccg 1151 ccaaactttt gaaaacaatg taa
This corresponds to the amino acid sequence <SEQ ID 828; ORF
230.ng>:
TABLE-US-01068 g230.pep 1 MFHSIEKYRT PAQVLLGLIA LTFVGFGVST
VSHPGADYIV QVGDEKISEH 51 SINNAMQNEQ ADGGSPWRDA VFQSLLQRAY
LKQGAKLMGI SVSSEQIKQM 101 IVDDPNFHDA NGKFSHALLS QYLSQRHMSE
DQFVEEIRDQ FALQNLVSLV 151 QNGVLVGDAQ AEQLIRLTQV NRTIRSHTFN
PDEFIAQVKA SEADLQKFYN 201 ANKKDYLLPQ AVKLEYVALN LKDFADKQTV
SETEVKNAFE ERVARLPAHE 251 AKPSFEQEKA AVENELKMKK AVADFNKAKE
KLGDDAFNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG MPENLINAVF
SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKNLLFEEA KDAVRQAYIR
TEAAKLLKTM *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 829>:
TABLE-US-01069 m230.seq (partial) 1 ATGTTCCATT CCATCGAAAA
ATACAGAACG CCCGCCCAAG TCCTTTTGGG 51 CCTGATTGCA TTAACCTTCG
TCGGCTTCGG GGTCAGCACG GTATCCCATC 101 CGGGTGCCGA CTACATCGTC
CAAGTGGGCG ACGAAAAAaT CAGCGACCAC 151 TCCATCAACA ACGCCATACA
GAACGAACAG GCGGACGGCG GCGGCCCTTC 201 GCc.GACGCG GTGTTCCAAT
CCCTGCTGCA ACGCGCCTAC CTGAAACAGG 251 GCGCGAAGCT GATGGGCATT
TCGGTTTCTT CCGAACAAAT CAAGCAAATT 301 ATCGTGGACG ATCCCAATTT
CCACGACGCA AACGGCAAAT TCGACCACGC 351 GCTTTTAAAC CGCTACCTTT
CCCAACGCCA TATGTCTGAA GACCAGTTTG 401 TCGAAGAAAT CCGCGATCAG
TTTGCCTTGC AGAATTTGGT AAACCTCGTC 451 CAAAACGGCG TATTGGTCGG
CGACGCGCAG GCGGAACAGC TGATCAGGCT 501 GACACAGGTC AACCGCACCA
TCCGTTCGCA CACTTTCAAC CCCGACGAGT 551 TCATCGCCCA AGTCAAAGTG
TCTGAAGCCG ATTTGCAGAA ATTTTATAAT 601 GCGAACAAAA AAGACTATCT
GCTGCCGCAG gCGGTCAAAT TGGAATATGT 651 CGCCTTGAAT CTGAAGGATT
TTGCAGACAA GCAGACCGTC AGTGAAACGg 701 AAGTGAAAAA TGCATTTGAA
GAGCGCGTGG CGCGTTTGCC GGCAAATGAA 751 GCCAAACCTT CTTTCGAGCA
GGAAAAAGCC GCCGTCGAAA ACGAATTGAA 801 AATGAAAAAG GCGGTTGCCG
ACTTCAACAA GGCAAAAGAA AAATTGGGCG 851 ACGATGC.GT cAACCATCCT
TCyTCGCTTG CCGAAGCCGC CAAAAACAGC 901 GGTTTGAAAG TCGAAACCCA
AGAAACTTGG CTGAGTAGGC AGGACGCGCA 951 AATGTCCGGT ATGCCCGAAA
ACCTGATCAA TGCCGTATTC AGCGACGACG 1001 TATTGAAGAA AAAACACAAT
TCCGAAGTGC TGACCATCAA CAGCGAAACC 1051 GCGTGGGTCG TCCGCGCCAA
AGAAGTCCGC GAAGAGAAAA CCCTGCCGTT 1101 TGCCGAAGCC AAAGACGCGG
TACGTCAGGC TTATATCCGT ACCGAAGCCG 1151 CCAAACTT.. ...
This corresponds to the amino acid sequence <SEQ ID 830; ORF
230>:
TABLE-US-01070 m230.pep (partial) 1 MFHSIEKYRT PAQVLLGLIA
LTFVGFGVST VSHPGADYIV QVGDEKISDH 51 SINNAIQNEQ ADGGGPSPDA
VFQSLLQRAY LKQGAKLMGI SVSSEQIKQI 101 IVDDPNFHDA NGKFDHALLN
RYLSQRHMSE DQFVEEIRDQ FALQNLVNLV 151 QNGVLVGDAQ AEQLIRLTQV
NRTIRSHTFN PDEFIAQVKV SEADLQKFYN 201 ANKKDYLLPQ AVKLEYVALN
LKDFADKQTV SETEVKNAFE ERVARLPANE 251 AKPSFEQEKA AVENELKMKK
AVADFNKAKE KLGDDAVNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG
MPENLINAVF SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKTLPFAEA
KDAVRQAYIR TEAAKL....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 230
shows 95.9% identity over a 386 aa overlap with a predicted ORF
(ORF 230.ng) from N. gonorrhoeae:
TABLE-US-01071 m230/g230 10 20 30 40 50 60 m230.pep
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ
||||||||||||||||||||||||||||||||||||||||||||||||:||||||:|||| g230
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 10 20
30 40 50 60 70 80 90 100 110 120 m230.pep
ADGGGPSPDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN ||||:|
|||||||||||||||||||||||||||||||:||||||||||||||:||||: g230
ADGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALLS 70 80
90 100 110 120 130 140 150 160 170 180 m230.pep
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN
:||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| g230
QYLSQRHMSEDQFVEEIRDQFALQNLVSLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN 130
140 150 160 170 180 190 200 210 220 230 240 m230.pep
PDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| g230
PDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE 190
200 210 220 230 240 250 260 270 280 290 300 m230.pep
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAVNHPSSLAEAAKNS
||||||||:||||||||||||||||||||||||||||||||||||| ||||||||||||| g230
ERVARLPAHEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS 250
260 270 280 290 300 310 320 330 340 350 360 m230.pep
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g230
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR 310
320 330 340 350 360 370 380 m230.pep EEKTLPFAEAKDAVRQAYIRTEAAKL
|||:| | |||||||||||||||||| g230 EEKNLLFEEAKDAVRQAYIRTEAAKLLKTM 370
380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 831>:
TABLE-US-01072 a230.seq (partial) 1 ATGTTCCATT CCATCGAAAA
ATACAGAACG CCCGCCCAAG TCCTTTTGGG 51 CCTGATTGCA TTAACCTTCG
TCGGCTTCGG GGTCAGCACG GTATCCCATC 101 CGGGTGCCGA CTACATCGTC
CAAGTGGGCG ACGAAAAAAT CAGCGACCAC 151 TCCATCAACA ACGCCATACA
GAACGAACAG GCGGACGGCG GCGGCCCTTC 201 GCGCGACGCG GTGTTCCAAT
CCCTGCTACA ACGCGCCTAC CTGAAACAGG 251 GCGCGAAGCT GATGGGCATT
TCGGTTTCTT CCGAACAAAT CAAGCAGATT 301 ATCGTGGACG ATCCCAATTT
CCACGACGCA AACGGCAAAT TCGACCACGC 351 GCTTTTAAAC CGCTACCTTT
CCCAACGTCA TATGTCTGAA GACCAGTTTG 401 TCGAAGAAAT CCGCGATCAG
TTTGCCTTGC AGAATTTGGT AAACCTCGTC 451 CAAAACGGCG TATTGGTCGG
CGACGCGCAG GCGGAACAGC TGATCAGGCT 501 GACGCAGGTC AACCGCACCA
TCCGTTCGCA CACTTTCAAC CCCGACGAAT 551 TCATCGCCCA AGTCAAAGTG
TCTGAAGCCG ATTTGCAGAA GTTTTATAAC 601 GCAAACAAAA AAGACTACCT
GCTTCCCAAA GCGGTCAAAT TGGAATATGT 651 CGCCTTGAAT CTGAAAGACT
TTGCAGACAA ACAGACCGTC AGCGAAACAG 701 AAGTGAAAAA TGCGTTTGAA
GAGCGCGTGG CGCGTTTGCC GGCAAATGAA 751 GCCAAACCTT CTTTCGAGCA
GGAAAAAGCC GCCGTCGAAA ACGAATTGAA 801 AATGAAAAAG GCGGTTGCCG
ACTTCAATAA GGCAAAAGAA AAGCTGGGCG 851 ATGACGCGTT CAACCATCCT
TCCTCGCTTG CCGAAGCCGC CAAAAACAGC 901 GGTTTGAAAG TCGAAACCCA
AGAAACTTGG CTGAGCAGGC AGGATGCGCA 951 AATGTCCGGT ATGCCCGAAA
ACCTGATCAA TGCCGTATTC AGCGACGACG 1001 TATTGAAGAA AAAACACAAT
TCCGAAGTGC TGACCATCAA CAGCGAAACC 1051 GCGTGGGTCG TCCGCGCCAA
AGAAGTCCGC GAAGAGAAAA CCCTGCCGTT 1101 TGCCGAAGCC AAAGACGCGG
TACGTCAGGC TTATATCCGT ACCGAAGCCG 1151 CCAAACTT
This corresponds to the amino acid sequence <SEQ ID 832; ORF
230.a>:
TABLE-US-01073 a230.pep (partial) 1 MFHSIEKYRT PAQVLLGLIA
LTFVGFGVST VSHPGADYIV QVGDEKISDH 51 SINNAIQNEQ ADGGGPSRDA
VFQSLLQRAY LKQGAKLMGI SVSSEQIKQI 101 IVDDPNFHDA NGKFDHALLN
RYLSQRHMSE DQFVEEIRDQ FALQNLVNLV 151 QNGVLVGDAQ AEQLIRLTQV
NRTIRSHTFN PDEFIAQVKV SEADLQKFYN 201 ANKKDYLLPK AVKLEYVALN
LKDFADKQTV SETEVKNAFE ERVARLPANE 251 AKPSFEQEKA AVENELKMKK
AVADFNKAKE KLGDDAFNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG
MPENLINAVF SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKTLPFAEA
KDAVRQAYIR TEAAKL m230/a230 99.2% identity in 386 aa overlap 10 20
30 40 50 60 m230.pep
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a230
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 10 20
30 40 50 60 70 80 90 100 110 120 m230.pep
ADGGGPSPDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| a230
ADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN 70 80
90 100 110 120 130 140 150 160 170 180 m230.pep
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a230
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN 130
140 150 160 170 180 190 200 210 220 230 240 m230.pep
PDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| a230
PDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKNAFE 190
200 210 220 230 240 250 260 270 280 290 300 m230.pep
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAVNHPSSLAEAAKNS
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| a230
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS 250
260 270 280 290 300 310 320 330 340 350 360 m230.pep
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a230
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR 310
320 330 340 350 360 370 380 m230.pep EEKTLPFAEAKDAVRQAYIRTEAAKL
|||||||||||||||||||||||||| a230 EEKTLPFAEAKDAVRQAYIRTEAAKL 370
380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 833>:
TABLE-US-01074 g230-1.seq 1 ATGTTCCATT CCATCGAAAA ATACAGAACA
CCCGCCCAAG TCTTATTAGG 51 CCTGATTGCA TTAACTTTTG TCGGCTTCGG
CGTCAGCACG GTTTCCCATC 101 CGGGCGCCGA CTACATCGTC CAAGTGGGCG
ACGAAAAAAT CAGCGAGCAC 151 TCAATCAACA ACGCCATGCA GAACGAGCAG
GCGGACGGCG GCAGCCCTTG 201 GCGCGACGCG GTGTTCCAAT CCCTGCTGCA
ACGCGCCTAC CTGAAACAGG 251 GCGCGAAGCT GATGGGCATT TCGGTTTCTT
CCGAACAAAT CAAGCAGATG 301 ATTGTGGACG ATCCCAATTT CCACGACGCA
AACGGCAAAT TCAGTCACGC 351 GCTTTTGAGT CAATACCTGT CGCAACGCCA
TATGTCTGAA GACCAGTTTG 401 TCGAAGAAAT CCGCGATCAG TTTGCCTTGC
AGAATTTGGT AAGCCTCGTC 451 CAAAACGGCG TATTGGTCGG CGACGCGCAG
GCGGAACAGC TGATCAGGCT 501 GACGCAGGTC AACCGCACCA TCCGTTCGCA
CACTTTCAAC CCCGACGAGT 551 TCATCGCCCA AGTCAAAGCG TCTGAAGCCG
ATTTGCAGAA ATTTTATAAT 601 GCGAACAAAA AAGACTATCT GCTGCCGCAG
GCGGTCAAAT TGGAATATGT 651 CGCCTTGAAT CTGAAGGATT TTGCAGACAA
GCAGACCGTC AGTGAAACGG 701 AAGTGAAAAA TGCGTTTGAA GAGCGCGTGG
CGCGTTTGCC GGCACATGAA 751 GCCAAACCTT CTTTCGAGCA GGAAAAAGCC
GCCGTCGAAA ACGAATTGAA 801 AATGAAAAAG GCGGTTGCCG ACTTCAACAA
GGCAAAAGAA AAGCTGGGCG 851 ACGATGCGTT CAATCATCCC TCCTCGCTTG
CCGAAGCCGC CAAAAACAGC 901 GGTTTGAAAG TGGAAACCCA AGAAACTTGG
CTGAGCAGGC AGGACGCACA 951 AATGTCCGGC ATGCCCGAAA ACCTAATCAA
TGCCGTATTC AGCGACGACG 1001 TATTGAAGAA AAAACACAAT TCCGAAGTGC
TGACCATCAA CAGCGAAACC 1051 GCGTGGGTCG TCCGCGCCAA AGAAGTCCGC
GAAGAAAAAA ACCTACTGTT 1101 TGAAGAAGCC AAAGATGCGG TGCGTCAGGC
CTATATCCGT ACCGAAGCCG 1151 CCAAACTTGC CGAAAACAAG GCAAAAGAAG
TGCTTACCCA ACTGAACGGC 1201 GGCAAGGCAG TTGACGTGAA ATGGTCGGAA
GTGTCCGTTT TGGGCGCGCA 1251 GCAGGCAAGG CAGTCCATGC CGCCCGAGGC
TTATGCGGAA CTGCTGAAAG 1301 CAAAACCGGC AAACGGCAAA CCCGCCTATG
TCAGACTGAC CGGTCTGCCG 1351 GCACCCGTGA TTGTCGAGGC GCAGGCAGTC
ACGCCTCCGG AGGATATTGC 1401 CGCACAGCTT CCTCCTGCGA AACAGGCTTT
GGCGCAACAG CAGTCTGCCA 1451 ATACTTTCGA CCTGCTGATC CGCTATTTCA
ACGGAAAAAT CAAACAGACT 1501 AAAGGAGCAC AATCGGTTGA CAACGGCGAT
GGTCAGTAA
This corresponds to the amino acid sequence <SEQ ID 834; ORF
230-1.ng>:
TABLE-US-01075 g230-1.pep 1 MFHSIEKYRT PAQVLLGLIA LTFVGFGVST
VSHPGADYIV QVGDEKISEH 51 SINNAMQNEQ ADGGSPWRDA VFQSLLQRAY
LKQGAKLMGI SVSSEQIKQM 101 IVDDPNFHDA NGKFSHALLS QYLSQRHMSE
DQFVEEIRDQ FALQNLVSLV 151 QNGVLVGDAQ AEQLIRLTQV NRTIRSHTFN
PDEFIAQVKA SEADLQKFYN 201 ANKKDYLLPQ AVKLEYVALN LKDFADKQTV
SETEVKNAFE ERVARLPAHE 251 AKPSFEQEKA AVENELKMKK AVADFNKAKE
KLGDDAFNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG MPENLINAVF
SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKNLLFEEA KDAVRQAYIR
TEAAKLAENK AKEVLTQLNG 401 GKAVDVKWSE VSVLGAQQAR QSMPPEAYAE
LLKAKPANGK PAYVRLTGLP 451 APVIVEAQAV TPPEDIAAQL PPAKQALAQQ
QSANTFDLLI RYFNGKIKQT 501 KGAQSVDNGD GQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 835>:
TABLE-US-01076 m230-1.seq 1 ATGTTCCATT CCATCGAAAA ATACAGAACG
CCCGCCCAAG TCCTTTTGGG 51 CCTGATTGCA TTAACCTTCG TCGGCTTCGG
GGTCAGCACG GTATCCCATC 101 CGGGTGCCGA CTACATCGTC CAAGTGGGCG
ACGAAAAAAT CAGCGACCAC 151 TCCATCAACA ACGCCATACA GAACGAACAG
GCGGACGGCG GCGGCCCTTC 201 GCGCGACGCG GTGTTCCAAT CCCTGCTGCA
ACGCGCCTAC CTGAAACAGG 251 GCGCGAAGCT GATGGGCATT TCGGTTTCTT
CCGAACAAAT CAAGCAAATT 301 ATCGTGGACG ATCCCAATTT CCACGACGCA
AACGGCAAAT TCGACCACGC 351 GCTTTTAAAC CGCTACCTTT CCCAACGCCA
TATGTCTGAA GACCAGTTTG 401 TCGAAGAAAT CCGCGATCAG TTTGCCTTGC
AGAATTTGGT AAACCTCGTC 451 CAAAACGGCG TATTGGTCGG CGACGCGCAG
GCGGAACAGC TGATCAGGCT 501 GACACAGGTC AACCGCACCA TCCGTTCGCA
CACTTTCAAC CCCGACGAGT 551 TCATCGCCCA AGTCAAAGTG TCTGAAGCCG
ATTTGCAGAA ATTTTATAAT 601 GCGAACAAAA AAGACTATCT GCTGCCGCAG
GCGGTCAAAT TGGAATATGT 651 CGCCTTGAAT CTGAAGGATT TTGCAGACAA
GCAGACCGTC AGTGAAACGG 701 AAGTGAAAAA TGCATTTGAA GAGCGCGTGG
CGCGTTTGCC GGCAAATGAA 751 GCCAAACCTT CTTTCGAGCA GGAAAAAGCC
GCCGTCGAAA ACGAATTGAA 801 AATGAAAAAG GCGGTTGCCG ACTTCAACAA
GGCAAAAGAA AAATTGGGCG 851 ACGATGCGTT CAACCATCCT TCCTCGCTTG
CCGAAGCCGC CAAAAACAGC 901 GGTTTGAAAG TCGAAACCCA AGAAACTTGG
CTGAGTAGGC AGGACGCGCA 951 AATGTCCGGT ATGCCCGAAA ACCTGATCAA
TGCCGTATTC AGCGACGACG 1001 TATTGAAGAA AAAACACAAT TCCGAAGTGC
TGACCATCAA CAGCGAAACC 1051 GCGTGGGTCG TCCGCGCCAA AGAAGTCCGC
GAAGAGAAAA CCCTGCCGTT 1101 TGCCGAAGCC AAAGACGCGG TACGTCAGGC
TTATATCCGT ACCGAAGCCG 1151 CCAAACTTGC CGAAAACAAG GCAAAAGACG
TGCTTACCCA ACTGAACGGC 1201 GGCAAGGCTG TTGACGTGAA ATGGTCGGAA
GTGTCCGTTT TGGGCGCACA 1251 GCAGGCAAGG CAGTCCATGC CGCCCGAGGC
TTATGCGGAA CTGCTGAAAG 1301 CAAAACCGGC AAACGGCAAA CCCGCCTACG
TCAGGCTGAT CGGTCTGCCG 1351 GCACCCGTGA TTGTCGAAGT ACAGGCTGTA
ACCCCGCCGG ATGATATCGC 1401 CGCACAGCTT CCGCTTGCAA AACAGGCTTT
GGCGCAACAG CAGTCTGCCA 1451 ATACTTTCGA CTTGTTGATA CGTTATTTCA
ACGGCAAAAT CAAACAGACC 1501 AAAGGAGCGC AATCGGTCGA CAACGGCGAC
GGTCAGTAA
This corresponds to the amino acid sequence <SEQ ID 836; ORF
230-1>:
TABLE-US-01077 m230-1.pep 1 MFHSIEKYRT PAQVLLGLIA LTFVGFGVST
VSHPGADYIV QVGDEKISDH 51 SINNAIQNEQ ADGGGPSRDA VFQSLLQRAY
LKQGAKLMGI SVSSEQIKQI 101 IVDDPNFHDA NGKFDHALLN RYLSQRHMSE
DQFVEEIRDQ FALQNLVNLV 151 QNGVLVGDAQ AEQLIRLTQV NRTIRSHTFN
PDEFIAQVKV SEADLQKFYN 201 ANKKDYLLPQ AVKLEYVALN LKDFADKQTV
SETEVKNAFE ERVARLPANE 251 AKPSFEQEKA AVENELKMKK AVADFNKAKE
KLGDDAFNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG MPENLINAVF
SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKTLPFAEA KDAVRQAYIR
TEAAKLAENK AKDVLTQLNG 401 GKAVDVKWSE VSVLGAQQAR QSMPPEAYAE
LLKAKPANGK PAYVRLIGLP 451 APVIVEVQAV TPPDDIAAQL PLAKQALAQQ
QSANTFDLLI RYFNGKIKQT 501 KGAQSVDNGD GQ* m230-1/g230-1 96.3%
identity in 512 aa overlap 10 20 30 40 50 60 m230-1.pep
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ
||||||||||||||||||||||||||||||||||||||||||||||||:||||||:|||| g230-1
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISEHSINNAMQNEQ 10 20
30 40 50 60 70 80 90 100 110 120 m230-1.pep
ADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN ||||:|
||||||||||||||||||||||||||||||||:||||||||||||||:||||: g230-1
ADGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIVDDPNFHDANGKFSHALLS 70 80
90 100 110 120 130 140 150 160 170 180 m230-1.pep
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN
:||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| g230-1
QYLSQRHMSEDQFVEEIRDQFALQNLVSLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN 130
140 150 160 170 180 190 200 210 220 230 240 m230-1.pep
PDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| g230-1
PDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE 190
200 210 220 230 240 250 260 270 280 290 300 m230-1.pep
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| g230-1
ERVARLPAHEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS 250
260 270 280 290 300 310 320 330 340 350 360 m230-1.pep
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g230-1
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR 310
320 330 340 350 360 370 380 390 400 410 420 m230-1.pep
EEKTLPFAEAKDAVRQAYIRTEAAKLAENKAKDVLTQLNGGKAVDVKWSEVSVLGAQQAR |||:|
| ||||||||||||||||||||||||:||||||||||||||||||||||||||| g230-1
EEKNLLFEEAKDAVRQAYIRTEAAKLAENKAKEVLTQLNGGKAVDVKWSEVSVLGAQQAR 370
380 390 400 410 420 430 440 450 460 470 480 m230-1.pep
QSMPPEAYAELLKAKPANGKPAYVRLIGLPAPVIVEVQAVTPPDDIAAQLPLAKQALAQQ
|||||||||||||||||||||||||| |||||||||:||||||:||||||| |||||||| g230-1
QSMPPEAYAELLKAKPANGKPAYVRLTGLPAPVIVEAQAVTPPEDIAAQLPPAKQALAQQ 430
440 450 460 470 480 490 500 510 m230-1.pep
QSANTFDLLIRYFNGKIKQTKGAQSVDNGDGQX |||||||||||||||||||||||||||||||||
g230-1 QSANTFDLLIRYFNGKIKQTKGAQSVDNGDGQX 490 500 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 837>:
TABLE-US-01078 a230-1.seq 1 ATGTTCCATT CCATCGAAAA ATACAGAACG
CCCGCCCAAG TCCTTTTGGG 51 CCTGATTGCA TTAACCTTCG TCGGCTTCGG
GGTCAGCACG GTATCCCATC 101 CGGGTGCCGA CTACATCGTC CAAGTGGGCG
ACGAAAAAAT CAGCGACCAC 151 TCCATCAACA ACGCCATACA GAACGAACAG
GCGGACGGCG GCGGCCCTTC 201 GCGCGACGCG GTGTTCCAAT CCCTGCTACA
ACGCGCCTAC CTGAAACAGG 251 GCGCGAAGCT GATGGGCATT TCGGTTTCTT
CCGAACAAAT CAAGCAGATT 301 ATCGTGGACG ATCCCAATTT CCACGACGCA
AACGGCAAAT TCGACCACGC 351 GCTTTTAAAC CGCTACCTTT CCCAACGTCA
TATGTCTGAA GACCAGTTTG 401 TCGAAGAAAT CCGCGATCAG TTTGCCTTGC
AGAATTTGGT AAACCTCGTC 451 CAAAACGGCG TATTGGTCGG CGACGCGCAG
GCGGAACAGC TGATCAGGCT 501 GACGCAGGTC AACCGCACCA TCCGTTCGCA
CACTTTCAAC CCCGACGAAT 551 TCATCGCCCA AGTCAAAGTG TCTGAAGCCG
ATTTGCAGAA GTTTTATAAC 601 GCAAACAAAA AAGACTACCT GCTTCCCAAA
GCGGTCAAAT TGGAATATGT 651 CGCCTTGAAT CTGAAAGACT TTGCAGACAA
ACAGACCGTC AGCGAAACAG 701 AAGTGAAAAA TGCGTTTGAA GAGCGCGTGG
CGCGTTTGCC GGCAAATGAA 751 GCCAAACCTT CTTTCGAGCA GGAAAAAGCC
GCCGTCGAAA ACGAATTGAA 801 AATGAAAAAG GCGGTTGCCG ACTTCAATAA
GGCAAAAGAA AAGCTGGGCG 851 ATGACGCGTT CAACCATCCT TCCTCGCTTG
CCGAAGCCGC CAAAAACAGC 901 GGTTTGAAAG TCGAAACCCA AGAAACTTGG
CTGAGCAGGC AGGATGCGCA 951 AATGTCCGGT ATGCCCGAAA ACCTGATCAA
TGCCGTATTC AGCGACGACG 1001 TATTGAAGAA AAAACACAAT TCCGAAGTGC
TGACCATCAA CAGCGAAACC 1051 GCGTGGGTCG TCCGCGCCAA AGAAGTCCGC
GAAGAGAAAA CCCTGCCGTT 1101 TGCCGAAGCC AAAGACGCGG TACGTCAGGC
TTATATCCGT ACCGAAGCCG 1151 CCAAACTTGC CGAAAACAAG GCAAAAGACG
TGCTTACCCA ACTGAACGGC 1201 GGCAAGGCTG TTGACGTGAA ATGGTCGGAA
GTGTCCGTTT TGGGCGCACA 1251 GCAGGCAAGG CAGTCCATGC CGCCCGAGGC
TTATGCGGAA CTGCTGAAAG 1301 CAAAACCGGC AAACGGCAAA CCCGCCTACG
TCAGGCTGAT CGGTCTGCCG 1351 GCACCCGTGA TTGTCGAAGT ACAGGCTGTA
ACCCCGCCGG ATGATATCGC 1401 CGCACAGCTT CCGCTTGCAA AACAGGCTTT
GGCGCAACAG CAGTCTGCCA 1451 ATACTTTCGA CTTGTTGATA CGTTATTTCA
ACGGCAAAAT CAAACAGACC 1501 AAAGGAGCGC AATCGGTCGA CAACGGCGAC
GGTCAGTAA
This corresponds to the amino acid sequence <SEQ ID 838; ORF
230-1.a>:
TABLE-US-01079 a230-1.pep 1 MFHSIEKYRT PAQVLLGLIA LTFVGFGVST
VSHPGADYIV QVGDEKISDH 51 SINNAIQNEQ ADGGGPSRDA VFQSLLQRAY
LKQGAKLMGI SVSSEQIKQI 101 IVDDPNFHDA NGKFDHALLN RYLSQRHMSE
DQFVEEIRDQ FALQNLVNLV 151 QNGVLVGDAQ AEQLIRLTQV NRTIRSHTFN
PDEFIAQVKV SEADLQKFYN 201 ANKKDYLLPK AVKLEYVALN LKDFADKQTV
SETEVKNAFE ERVARLPANE 251 AKPSFEQEKA AVENELKMKK AVADFNKAKE
KLGDDAFNHP SSLAEAAKNS 301 GLKVETQETW LSRQDAQMSG MPENLINAVF
SDDVLKKKHN SEVLTINSET 351 AWVVRAKEVR EEKTLPFAEA KDAVRQAYIR
TEAAKLAENK AKDVLTQLNG 401 GKAVDVKWSE VSVLGAQQAR QSMPPEAYAE
LLKAKPANGK PAYVRLIGLP 451 APVIVEVQAV TPPDDIAAQL PLAKQALAQQ
QSANTFDLLI RYFNGKIKQT 501 KGAQSVDNGD GQ* a230-1/m230-1 99.8%
identity in 512 aa overlap 10 20 30 40 50 60 a230-1.pep
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQNEQ 10 20
30 40 50 60 70 80 90 100 110 120 a230-1.pep
ADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
ADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALLN 70 80
90 100 110 120 130 140 150 160 170 180 a230-1.pep
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
RYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQAEQLIRLTQVNRTIRSHTFN 130
140 150 160 170 180 190 200 210 220 230 240 a230-1.pep
PDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVALNLKDFADKQTVSETEVKNAFE
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| m230-1
PDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVALNLKDFADKQTVSETEVKNAFE 190
200 210 220 230 240 250 260 270 280 290 300 a230-1.pep
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
ERVARLPANEAKPSFEQEKAAVENELKMKKAVADFNKAKEKLGDDAFNHPSSLAEAAKNS 250
260 270 280 290 300 310 320 330 340 350 360 a230-1.pep
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
GLKVETQETWLSRQDAQMSGMPENLINAVFSDDVLKKKHNSEVLTINSETAWVVRAKEVR 310
320 330 340 350 360 370 380 390 400 410 420 a230-1.pep
EEKTLPFAEAKDAVRQAYIRTEAAKLAENKAKDVLTQLNGGKAVDVKWSEVSVLGAQQAR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
EEKTLPFAEAKDAVRQAYIRTEAAKLAENKAKDVLTQLNGGKAVDVKWSEVSVLGAQQAR 370
380 390 400 410 420 430 440 450 460 470 480 a230-1.pep
QSMPPEAYAELLKAKPANGKPAYVRLIGLPAPVIVEVQAVTPPDDIAAQLPLAKQALAQQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m230-1
QSMPPEAYAELLKAKPANGKPAYVRLIGLPAPVIVEVQAVTPPDDIAAQLPLAKQALAQQ 430
440 450 460 470 480 490 500 510 a230-1.pep
QSANTFDLLIRYFNGKIKQTKGAQSVDNGDGQX |||||||||||||||||||||||||||||||||
m230-1 QSANTFDLLIRYFNGKIKQTKGAQSVDNGDGQX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 839>:
TABLE-US-01080 g231.seq 1 atgtcaaaac gaaaatccat aaaccgtccg
tatcaaaaac cggcggaact 51 gccgccgttg caaaataatc cgccatttta
ccgtaaaaac cgccgcctga 101 acttttttat cgcggcagac ggcggttgcg
cgtctccgca aaaatgcagg 151 gcgcgcggtt ttcagacggc atttgccgtt
caaggccgtg cggtgtcttt 201 accaaatgcc caaccattcg cccacggaat
ccatccaatc cttattgccc 251 ccgccgctcc tgcctgcccg gcggtacgcc
cacggcgctt gcggattttt 301 agctttccac aatcctttgc gttccctttc
cgcctgaatt tgagcgtcgg 351 catagtcggc aaaatccgcc ttatcctgct
gttctttagc ataactttta 401 taatgccacg ccgccccgtc ctgcacctgc
atcaggttca aatcggtttt 451 gccggcggat acctgcgcca cttcgcgctg
atagcggtcg gtttcaaaca 501 cacgtacact gactttccta ccctccgccg
ccgcgcgcag gttgtcgcgc 551 gaacgtgtac cgtaagcctg tttcatctcc
ggtgcgtcga tatacgccat 601 ccgaatttta tgtttcgcgc cgtcgccgtc
gatgacgtga agggtatcgc 651 cgtcatagac tttggacacc gtgcctgtgt
agctgtggcc ggatttcgcc 701 gatgcccgtc ggcgaacggg cgcgtcgaaa
cccacgtccc ctgcagtgcc 751 gagtacgtcg agtacggcaa ccgccgtccg
caccgcctca ctgtcatatc 801 ccgtataacc caacgcgccc aaaagcgaca
gggcgacggg aagccatttc 851 atgatttttt taatctgcat atttttcaaa
tgccgatgcc gtctgaacat 901 ctctga
This corresponds to the amino acid sequence <SEQ ID 840; ORF
231.ng>:
TABLE-US-01081 g231.pep 1 MSKRKSINRP YQKPAELPPL QNNPPFYRKN
RRLNFFIAAD GGCASPQKCR 51 ARGFQTAFAV QGRAVSLPNA QPFAHGIHPI
LIAPAAPACP AVRPRRLRIF 101 SFPQSFAFPF RLNLSVGIVG KIRLILLFFS
ITFIMPRRPV LHLHQVQIGF 151 AGGYLRHFAL IAVGFKHTYT DFPTLRRRAQ
VVARTCTVSL FHLRCVDIRH 201 PNFMFRAVAV DDVKGIAVID FGHRACVAVA
GFRRCPSANG RVETHVPCSA 251 EYVEYGNRRP HRLTVISRIT QRAQKRQGDG
KPFHDFFNLH IFQMPMPSEH 301 L*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 841>:
TABLE-US-01082 m231.seq (partial) 1 ATGTCAAAAC GAAAATCCAT
AAACCGTCCG TATCAAAAAC CGGCGGAACT 51 GCCGCCGTTG CAAAATAATC
CGCCATTTTA CCGTAAAAAC CGCCGCCTGA 101 ACTTTTTTAT CGCGGCAGAC
GGCGGTTGCG CGTCTCCGCA AAAATGCAGG 151 GCGCGCGGTT TTCAGACGGC
ATTTGCCGTT CAAAGCCGTG CGGTGTCTTT 201 ACCAAATGCC CAACCATTCG
GC....
This corresponds to the amino acid sequence <SEQ ID 842; ORF
231>:
TABLE-US-01083 m231.pep (partial) 1 MSKRKSINRP YQKPAELPPL
QNNPPFYRKN RRLNFFIAAD GGCASPQKCR 51 ARGFQTAFAV QSRAVSLPNA
QPFG.....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 231
shows 98.6% identity over a 73 aa overlap with a predicted ORF (ORF
231.ng) from N. gonorrhoeae:
TABLE-US-01084 m231/g231 10 20 30 40 50 60 m231.pep
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g231
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV 10 20
30 40 50 60 70 m231.pep QSRAVSLPNAQPFG |:|||||||||||: g231
QGRAVSLPNAQPFAHGIHPILIAPAAPACPAVRPRRLRIFSFPQSFAFPFRLNLSVGIVG 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 843>:
TABLE-US-01085 a231.seq (partial) 1 ATGTCAAAAC GAAAATCCAT
AAACCGTCCG TATCAAAAAC CGGCGGAACT 51 GCCGCCGTTG CAAAATAATC
CGCCATTTTA CCGTAAAAAC CGCCGCCTGA 101 ACTTTTTTAT CGNGGCAGAC
GGCGGTTGCG CGTCTCCGCA AAAATGCAGG 151 GCGCGCGGTT TTCAGACGGC
ATTTGCCGTT CAAAGCCGTG CGGTGTCTTT 201 ACCAAATGCC CAACCATTCG
CCCACGGCAT CCATCCAATC CTTATTGCCC 251 CCGCCGCTCC TGCCTGCCCG
GCGGTACGCC CACGGCGCTT GCGGATTTTT 301 AGCTTTCCAC AATCCTTTGC
GTTCCCTTTC CGCCTGAATT TGAGCGTCGG 351 CATAATCGGC AAAATCCGCC
TTATCCTGCT GTTCTTTAGC ATAACTTTTA 401 TAATGCCACG CCGCCCCGTC
CTGCACCTGC ATCAGGTTCA AATCGGTTTT 451 GCCGACAGAA ACCTGCGCCA
CTTCGCGCTG GTAGCGGTCG GTGTCGAACA 501 CGCGGACGCT GACTTTCCTG
CCTTCCGCCG CCGCGCGCAG GTTGTCGCGC 551 GAACGCGTGC CGTAAGCCTG
TTTCATCTCC GGCGCGTCGA TATACGCCAT 601 CCGGATTTTG TGTTTCGCGC
CGTCGCCGTC GATAACGTGA AGGGTGTCGC 651 CGTCATAGAC TTTGGACACC
GTGCCTGTGT AGCGGTGGCC GGATTTCGCC 701 GATGCTCGGC GGCGGGCGGG
CGCGTCGGAA CCCGCGTCCC CTGCCGCGCC 751 GAGTACGTCG AGTACGGCAA
CCGCCGTCCG CACCGCCTCG CTGCCGTACC 801 CCGTATAACC CAACGCACCC
AAAAGCGACA AGGCGACGGG AAGCCATTTC 851 ATGATTTTTT TAATCTGCAT
ATTTTTCAAA TGCCGATGCC GTCTGAACAT 901 ATC
This corresponds to the amino acid sequence <SEQ ID 844; ORF
217.a>:
TABLE-US-01086 a231.pep (partial) 1 MSKRKSINRP YQKPAELPPL
QNNPPFYRKN RRLNFFIXAD GGCASPQKCR 51 ARGFQTAFAV QSRAVSLPNA
QPFAHGIHPI LIAPAAPACP AVRPRRLRIF 101 SFPQSFAFPF RLNLSVGIIG
KIRLILLFFS ITFIMPRRPV LHLHQVQIGF 151 ADRNLRHFAL VAVGVEHADA
DFPAFRRRAQ VVARTRAVSL FHLRRVDIRH 201 PDFVFRAVAV DNVKGVAVID
FGHRACVAVA GFRRCSAAGG RVGTRVPCRA 251 EYVEYGNRRP HRLAAVPRIT
QRTQKRQGDG KPFHDFFNLH IFQMPMPSEH 301 I m231/a231 98.6% identity in
73 aa overlap 10 20 30 40 50 60 m231.pep
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| a231
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIXADGGCASPQKCRARGFQTAFAV 10 20
30 40 50 60 70 m231.pep QSRAVSLPNAQPFG |||||||||||||: a231
QSRAVSLPNAQPFAHGIHPILIAPAAPACPAVRPRRLRIFSFPQSFAFPFRLNLSVGIIG 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 845>:
TABLE-US-01087 g231-1.seq 1 ATGTCAAAAC GAAAATCCAT AAACCGTCCG
TATCAAAAAC CGGCGGAACT 51 GCCGCCGTTG CAAAATAATC CGCCATTTTA
CCGTAAAAAC CGCCGcCTGA 101 ACTTTTTTAT CGCGGCAGAC GGCGGTTGCG
CGTCTCCGCA AAAATGCAGG 151 GCGCGCGGTT TTCAGACGGC ATTTGCCGTT
CAAGGCCGTG CGGTGTCTTT 201 ACCAAATGCC CAACCATTCG CCCACGGAAT
CCATCCAATC CTTATTGCCC 251 CCGCCGCTCC TGCCTGCCCG GCGGTACGCC
CACGGCGCTT GCGGATTTTT 301 AGCTTTCCAC AATCCTTTGC GTTCCCTTTC
CGCCTGAATT TGAGCGTCGG 351 CATAGTCGGC AAAATCCGCC TTATCCTGCT
GTTCTTTAGC ATAACTTTTA 401 TAATGCCACG CCGCCCCGTC CTGCACCTGC
ATCAGGTTCA AATCGGTTTT 451 GCCGGCGGAT ACCTGCGCCA CTTCGCGCTG
ATAGCGGTCG GTTTCAAACa 501 CaCgTaCaat gagtttcgtA ccctccGCCG
ccgcgcgCAG GTTGtcgcGC 551 GAACgTGTAC CGTAagcgtg TTtcatctcc
GGTGCgtcGA TATACGCCaT 601 cCgAATTTta tGTttcgcgc cgtcgcCgtc
gATGACGTGA AGGGtatcGC 651 CgtcATAGAC TTTGGACACC Gtgcctgcgt
AGctGTGGCC GGATttcgc
This corresponds to the amino acid sequence <SEQ ID 846; ORF
231-1.ng>:
TABLE-US-01088 g231-1.pep 1 MSKRKSINRP YQKPAELPPL QNNPPFYRKN
RRLNFFIAAD GGCASPQKCR 51 ARGFQTAFAV QGRAVSLPNA QPFAHGIHPI
LIAPAAPACP AVRPRRLRIF 101 SFPQSFAFPF RLNLSVGIVG KIRLILLFFS
ITFIMPRRPV LHLHQVQIGF 151 AGGYLRHFAL IAVGFKHTYN EFRTLRRRAQ
VVARTCTVSV FHLRCVDIRH 201 PNFMFRAVAV DDVKGIAVID FGHRACVAVA GFR
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 847>:
TABLE-US-01089 m231-1.seq 1 ATGTCAAAAC GAAAATCCAT AAACCGTCCG
TATCAAAAAC CGGCGGAACT 51 GCCGCCGTTG CAAAATAATC CGCCATTTTA
CCGTAAAAAC CGCCGCCTGA 101 ACTTTTTTAT CGCGGCAGAC GGCGGTTGCG
CGTCTCCGCA AAAATGCAGG 151 GCGCGCGGTT TTCAGACGGC ATTTGCCGTT
CAAAGCCGTG CGGTGTCTTT 201 ACCAAATGCC CAACCATTCG CCCACGGCAT
CCATCCAATC CTTATTGCCC 251 CCGCCGCTCC TGCCTGCTCG GCGGTACGCC
CACGGCGCTT GCGGATTTTT 301 AGCTTTCCAC AATCCTTTGC GTTCCCTTTC
CGCCTGAATT TGAGCGTCGG 351 CATAATCGGC AAAATCCGCC TTATCCTGCT
GTTCTTTAGC ATAACTTTTA 401 TAATGCCACG CCGCCCCGTC CTGCACCTGC
ATCAGGTTCA AATCGGTTTT 451 GCCGACAGAA ACCTGCGCCA CTTCGCGCTG
GTAGCGGTCG GTATCGAACA 501 CGCGCACGCT GACTTTCCTG CCTTCCGCCG
CCGCGCGCAG GTTGTCGCGC 551 GAACGCGTGC CGTAAGCCTG TTTCATCTCC
GGCGCGTCGA TATACGCCAT 601 CCGGATTTTG TGTTTCGCGC CGTCGCCGTC
GATAACGTGA AGGGTGTCGC 651 CGTCATAGAC TTTGGACACC GTGCCTGTGT
AGCGGTGGCC GGATTTCGCC 701 GATGCTCGGC GGCGGGCGGG CGCGTCGGAA
CCCGCGTCCC CTGCCGCGCC 751 GAGTACGTCG AGTACGGCAA CCGCCGTCCG
CACCGCCTCG CTGCCGTACC 801 CCGTATAACC CAACGCACCC AAAAGCGACA
GGGCGACGGG AAGCCATTTC 851 ATGATTTTTT TAATCTGCAT ATTTTTCAAA
TGCCGATGCC GTCTGAACAT 901 ATCGGAATCG GATTTCAGAC GGCATCTTAA
This corresponds to the amino acid sequence <SEQ ID 848; ORF
231-1>:
TABLE-US-01090 m231-1.pep 1 MSKRKSINRP YQKPAELPPL QNNPPFYRKN
RRLNFFIAAD GGCASPQKCR 51 ARGFQTAFAV QSRAVSLPNA QPFAHGIHPI
LIAPAAPACS AVRPRRLRIF 101 SFPQSFAFPF RLNLSVGIIG KIRLILLFFS
ITFIMPRRPV LHLHQVQIGF 151 ADRNLRHFAL VAVGIEHAHA DFPAFRRRAQ
VVARTRAVSL FHLRRVDIRH 201 PDFVFRAVAV DNVKGVAVID FGHRACVAVA
GFRRCSAAGG RVGTRVPCRA 251 EYVEYGNRRP HRLAAVPRIT QRTQKRQGDG
KPFHDFFNLH IFQMPMPSEH 301 IGIGFQTAS* g231-1/m231-1 87.0% identity
in 262 aa overlap 10 20 30 40 50 60 g231-1.pep
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m231-1
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV 10 20
30 40 50 60 70 80 90 100 110 120 g231-1.pep
QGRAVSLPNAQPFAHGIHPILIAPAAPACPAVRPRRLRIFSFPQSFAFPFRLNLSVGIVG
|:||||||||||||||||||||||||||| ||||||||||||||||||||||||||||:| m231-1
QSRAVSLPNAQPFAHGIHPILIAPAAPACSAVRPRRLRIFSFPQSFAFPFRLNLSVGIIG 70 80
90 100 110 120 130 140 150 160 170 180 g231-1.pep
KIRLILLFFSITFIMPRRPVLHLHQVQIGFAGGYLRHFALIAVGFKHLYNEFRTLRRRAQ
||||||||||||||||||||||||||||||| ||||||:|||::|:: :| ::||||| m231-1
KIRLILLFFSITFIMPRRPVLHLHQVQIGFADRNLRHFALVAVGIEHAHADFPAFRRRAQ 130
140 150 160 170 180 190 200 210 220 230 240 g231-1.pep
VVARTCTVSVFHLRCVDIRHPNFMFRAVAVDDVKGIAVIDFGHRACVAVAGFRXCPSANG |||||
:||:|||| ||||||:|:|||||||:|||:||||||||||||||||| | :|:| m231-1
VVARTRAVSLFHLRRVDIRHPDFVFRAVAVDNVKGVAVIDFGHRACVAVAGFRRCSAAGG 190
200 210 220 230 240 250 260 g231-1.pep CVETHVPCSAEYVVXGNRRPHR |
|:||| |||| ||||||| m231-1
RVGTRVPCRAEYVEYGNRRPHRLAAVPRITQRTQKRQGDGKPFHDFFNLHIFQMPMPSEH 250
260 270 280 290 300
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 849>:
TABLE-US-01091 a231-1.seq 1 ATGTCAAAAC GAAAATCCAT AAACCGTCCG
TATCAAAAAC CGGCGGAACT 51 GCCGCCGTTG CAAAATAATC CGCCATTTTA
CCGTAAAAAC CGCCGCCTGA 101 ACTTTTTTAT CGCGGCAGAC GGCGGTTGCG
CGTCTCCGCA AAAATGCAGG 151 GCGCGCGGTT TTCAGACGGC ATTTGCCGTT
CAAAGCCGTG CGGTGTCTTT 201 ACCAAATGCC CAACCATTCG CCCACGGCAT
CCATCCAATC CTTATTGCCC 251 CCGCCGCTCC TGCCTGCCCG GCGGTACGCC
CACGGCGCTT GCGGATTTTT 301 AGCTTTCCAC AATCCTTTGC GTTCCCTTTC
CGCCTGAATT TGAGCGTCGG 351 CATAATCGGC AAAATCCGCC TTATCCTGCT
GTTCTTTAGC ATAACTTTTA 401 TAATGCCACG CCGCCCCGTC CTGCACCTGC
ATCAGGTTCA AATCGGTTTT 451 GCCGACAGAA ACCTGCGCCA CTTCGCGCTG
GTAGCGGTCG GTGTCGAACA 501 CGCGGACGCT GACTTTCCTG CCTTCCGCCG
CCGCGCGCAG GTTGTCGCGC 551 GAACGCGTGC CGTAAGCCTG TTTCATCTCC
GGCGCGTCGA TATACGCCAT 601 CCGGATTTTG TGTTTCGCGC CGTCGCCGTC
GATAACGTGA AGGGTGTCGC 651 CGTCATAGAC TTTGGACACC GTGCCTGTGT
AGCGGTGGCC GGATTTCGCC 701 GATGCTCGGC GGCGGGCGGG CGCGTCGGAA
CCCGCGTCCC CTGCCGCGCC 751 GAGTACGTCG AGTACGGCAA CCGCCGTCCG
CACCGCCTCG CTGCCGTACC 801 CCGTATAACC CAACGCACCC AAAAGCGACA
AGGCGACGGG AAGCCATTTC 851 ATGATTTTTT TAATCTGCAT ATTTTTCAAA
TGCCGATGCC GTCTGAACAT 901 ATCGGAATCG GATTTCAGAC GGCATCTTAA
This corresponds to the amino acid sequence <SEQ ID 850; ORF
231-1.a>:
TABLE-US-01092 a231-1.pep 1 MSKRKSINRP YQKPAELPPL QNNPPFYRKN
RRLNFFIAAD GGCASPQKCR 51 ARGFQTAFAV QSRAVSLPNA QPFAHGIHPI
LIAPAAPACP AVRPRRLRIF 101 SFPQSFAFPF RLNLSVGIIG KIRLILLFFS
ITFIMPRRPV LHLHQVQIGF 151 ADRNLRHFAL VAVGVEHADA DFPAFRRRAQ
VVARTRAVSL FHLRRVDIRH 201 PDFVFRAVAV DNVKGVAVID FGHRACVAVA
GFRRCSAAGG RVGTRVPCRA 251 EYVEYGNRRP HRLAAVPRIT QRTQKRQGDG
KPFHDFFNLH IFQMPMPSEH 301 IGIGFQTAS* a231-1/m231-1 99.0% identity
in 309 aa overlap 10 20 30 40 50 60 a231-1.pep
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m231-1
MSKRKSINRPYQKPAELPPLQNNPPFYRKNRRLNFFIAADGGCASPQKCRARGFQTAFAV 10 20
30 40 50 60 70 80 90 100 110 120 a231-1.pep
QSRAVSLPNAQPFAHGIHPILIAPAAPACPAVRPRRLRIFSFPQSFAFPFRLNLSVGIIG
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| m231-1
QSRAVSLPNAQPFAHGIHPILIAPAAPACSAVRPRRLRIFSFPQSFAFPFRLNLSVGIIG 70 80
90 100 110 120 130 140 150 160 170 180 a231-1.pep
KIRLILLFFSITFIMPRRPVLHLHQVQIGFADRNLRHFALVAVGVEHADADFPAFRRRAQ
||||||||||||||||||||||||||||||||||||||||||||:||| ||||||||||| m231-1
KIRLILLFFSITFIMPRRPVLHLHQVQIGFADRNLRHFALVAVGIEHAHADFPAFRRRAQ 130
140 150 160 170 180 190 200 210 220 230 240 a231-1.pep
VVARTRAVSLFHLRRVDIRHPDFVFRAVAVDNVKGVAVIDFGHRACVAVAGFRRCSAAGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m231-1
VVARTRAVSLFHLRRVDIRHPDFVFRAVAVDNVKGVAVIDFGHRACVAVAGFRRCSAAGG 190
200 210 220 230 240 250 260 270 280 290 300 a231-1.pep
RVGTRVPCRAEYVEYGNRRPHRLAAVPRITQRTQKRQGDGKPFHDFFNLHIFQMPMPSEH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m231-1
RVGTRVPCRAEYVEYGNRRPHRLAAVPRITQRTQKRQGDGKPFHDFFNLHIFQMPMPSEH 250
260 270 280 290 300 310 a231-1.pep IGIGFQTASX |||||||||| m231-1
IGIGFQTASX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 851>:
TABLE-US-01093 g232.seq 1 atgatgggca acagcctgat tgaatccggt
acgtttgtcg ccatcctgtt 51 tggtcagatt ttgggaacgg cggttgccgg
cgcgccgcct tatattgtcg 101 ggatactggt tttgctggtc gccgtcggag
gaacggccgg cagcctgttt 151 atgccgtccg tacccgccaa ggctgccgat
acccaaatcg agtggaatat 201 tgtccgtggt acaaaatccc tgctgcgtga
aacggtgcgg cacaatcccg 251 tttttaccgc cattatcggc atctcgtggt
tttggtttgt cggcgcggtt 301 tataccacgc aactgccgac ctttacccaa
atccatttgg gcggcaacga 351 taatgttttt aacctgatgc ttgctttgtt
ttccatcggt attgccgccg 401 gttcggtact gtgtgccaag ttcggcaggg
aacggctgat gttggcttgg 451 gtaacggttg gtgcgttggg ttcgacggtt
tgcggcctgg ttttggtgtg 501 gctgacgcac ggacaccgtt ttgaagggct
gaacggcatt ttttggtttt 551 tatcgcaagg atgggcatac cccgtgatgg
cggtgatgac gctgatcggc 601 tttttcggcg gatttttctc cgttccgctc
tatacctggc tgcaaaccgc 651 cagcagcgag actttccgcg cccgcgccgt
tgccgccaac aatatcgtta 701 acggcatctt tatggtttcc gccgccgttt
tgagcgcggt attgctgttt 751 ttgtttgaca gcatttccct gctgtatctg
attgtcgcct tgggcaatat 801 tccgttggcg gtatttttga ttaagcgcga
aaggcggttt ttaggcgcgg 851 cggcaatcag gaaaaaacct tga
This corresponds to the amino acid sequence <SEQ ID 852; ORF
232.ng>:
TABLE-US-01094 g232.pep 1 MMGNSLIESG TFVAILFGQI LGTAVAGAPP
YIVGILVLLV AVGGTAGSLF 51 MPSVPAKAAD TQIEWNIVRG TKSLLRETVR
HNPVFTAIIG ISWFWFVGAV 101 YTTQLPTFTQ IHLGGNDNVF NLMLALFSIG
IAAGSVLCAK FGRERLMLAW 151 VTVGALGSTV CGLVLVWLTH GHRFEGLNGI
FWFLSQGWAY PVMAVMTLIG 201 FFGGFFSVPL YTWLQTASSE TFRARAVAAN
NIVNGIFMVS AAVLSAVLLF 251 LFDSISLLYL IVALGNIPLA VFLIKRERRF
LGAAAIRKKP *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 853>:
TABLE-US-01095 m232.seq 1 ATGATGGGCA ACAGCCTGAT TGAATCGGGT
ACGTTTGTCG CCATCCTGTT 51 CGGTCAGATT TTGGGAACGG CGGTGGCAGG
TGTACCGCCT TATATTGTCG 101 GGATACTGGT TTTGCTGGTC GCCGTCGGAG
GCACGGTCGG CAGCCTGTTT 151 ATGCCGTCCG TACCCGCCAA GGCTGCCGAT
ACACAAATTG AGTGGAATAT 201 TGTCCGTGGC ACAAAATCCC TGCTGCGTGA
AACGGTGCGG CACAAGCCCG 251 TTTTTACCGC CATTATCGGT ATTTCGTGGT
TTTGGTTTGT CGGCGCGGTT 301 TATACCACGC AACTGCCGAC CTTTACCCAA
ATCCATCTGG GCGGCAACGA 351 CAATGTTTTC AACCTGATGC TTGCTCTGTT
TTCCATCGGT ATTGCCGCCG 401 GTTCGGTACT GTGTGCCAAG TTCAGCAkGG
AACGCCTGAT GTTGGCTTGG 451 GTAACGGTTG GTGCGTTGGG TTTGACGGTT
TGCGGCTTGG TTTTGGTGTG 501 GCTGACGCAC GGACACCGTT TTGAAGGGCT
GAACGGCATT TTTTrGTTTT 551 TATCGCAAGG ATGGGCATAT CCCGTGATGG
CGGTGATGAC GCTGATCGGC 601 TTTTTCGGCG GATTTTTCTC CGTTCCGCTC
TATACCt(g)TG CAAACCGCCa 651 TAGCGAGaTT TCCGCGCCCg GCCGTTGCCG
CCAACAATAT CGTTAACGGT 701 ATTTTTATGG TTTCCGCTGC CGTTTTGAGC
GCGGTGTTGC TGTTTTTGTT 751 TGACAGCATT TCCTTGTTGT ATCTGATTGT
CGCTTTGGGC AATATTCCGT 801 TGTCGGTATT TTTGATTAAG CGCGAAAGGC
GGTTTTTAGG CGCGGCGGCA 851 ATCAGGAAAA AACCTTGA
This corresponds to the amino acid sequence <SEQ ID 854; ORF
232>:
TABLE-US-01096 m232.pep 1 MMGNSLIESG TFVAILFGQI LGTAVAGVPP
YIVGILVLLV AVGGTVGSLF 51 MPSVPAKAAD TQIEWNIVRG TKSLLRETVR
HKPVFTAIIG ISWFWFVGAV 101 YTTQLPTFTQ IHLGGNDNVF NLMLALFSIG
IAAGSVLCAK FSXERLMLAW 151 VTVGALGLTV CGLVLVWLTH GHRFEGLNGI
FXFLSQGWAY PVMAVMTLIG 201 FFGGFFSVPL YTVQTAIARF PRPAVAANNI
VNGIFMVSAA VLSAVLLFLF 251 DSISLLYLIV ALGNIPLSVF LIKRERRFLG
AAAIRKKP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 232
shows 94.1% identity over a 290 aa overlap with a predicted ORF
(ORF 232.ng) from N. gonorrhoeae:
TABLE-US-01097 m232/g232 10 20 30 40 50 60 m232.pep
MMGNSLIESGTFVAILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAAD
|||||||||||||||||||||||||||:|||||||||||||||||:|||||||||||||| g232
MMGNSLIESGTFVAILFGQILGTAVAGAPPYIVGILVLLVAVGGTAGSLFMPSVPAKAAD 10 20
30 40 50 60 70 80 90 100 110 120 m232.pep
TQIEWNIVRGTKSLLRETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVF
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g232
TQIEWNIVRGTKSLLRETVRHNPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVF 70 80
90 100 110 120 130 140 150 160 170 180 m232.pep
NLMLALFSIGIAAGSVLCAKFSXERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGI
|||||||||||||||||||||: |||||||||||||| |||||||||||||||||||||| g232
NLMLALFSIGIAAGSVLCAKFGRERLMLAWVTVGALGSTVCGLVLVWLTHGHRFEGLNGI 130
140 150 160 170 180 190 200 210 220 230 m232.pep
FXFLSQGWAYPVMAVMTLIGFFGGFFSVPLYT-VQTAIARFPRP-AVAANNIVNGIFMVS |
|||||||||||||||||||||||||||||| :||| :: | ||||||||||||||| g232
FWFLSQGWAYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVS 190
200 210 220 230 240 240 250 260 270 280 289 m232.pep
AAVLSAVLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKPX
|||||||||||||||||||||||||||||:|||||||||||||||||||| g232
AAVLSAVLLFLFDSISLLYLIVALGNIPLAVFLIKRERRFLGAAAIRKKP 250 260 270 280
290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 855>:
TABLE-US-01098 a232.seq 1 ATGTACGCTA AAAAAGGCGG TTTGGGACTG
GTTAAAAGCC GCCGTTTCGC 51 ACCTCTTTTC GCTACGCAGT TTCTCGGCGC
GTTCAACGAC AATGTGTTCA 101 AAACCGCGCT GTTTGTGATG ATTGGGTTTT
ACGGTTTGGG GCAAAACGGC 151 TTCCTGCCTG CCGGACAGAT GTTGAACTTG
GGCGCGTTGC TGTTTATTTT 201 GCCGTATTTC CTGTTTTCCT CGCTGTCGGG
GCAGTTGGGT AACAAATTCG 251 ACAAGGCCGT TTTGGCGCGT TGGGCCAAGG
TGCTGGAAAT GATCATTATG 301 GCGGTGGCGG CATACGGGTT TTATATCCGG
TCTGCCCCGC TGCTTTTGGC 351 GTGTCTGTTT TGCATGGGCG CGCAATCGAC
GCTGTTCGGG CCGCTGAAAT 401 ACGCCATCCT GCCCGATTAT CTCGACGACA
AAGAGTTGAT GATGGGCAAC 451 AGCCTGATTG AATCGGGTAC GTTTGTCGCC
ATCCTGTTCG GTCAGATACT 501 GGGGACTGCG GTGGCAGGTG TACCGCCTTA
TATTGTCGGG ATACTGGTTT 551 TGCTGGTCGC CGTAGGAGGC ACGGTCGGCA
GCCTGTTTAT GCCGTCCGTA 601 CCCGCCAAGG CTGCCGATAC ACAAATTGAG
TGGAATATTG TCCGGGGTAC 651 AAAATCCCTG CTGCGTGAAA CGGTGCGGCA
CAAGCCCGTT TTTACCGCCA 701 TTATCGGTAT TTCGTGGTTT TGGTTTGTCG
GCGCGGTTTA TACCACGCAA 751 CTGCCGACCT TTACCCAAAT CCATCTAGGC
GGCAACGACA ATGTTTTCAA 801 CCTGATGCTT GCCCTGTTTT CCATCGGTAT
TGCCGCCGGT TCGGTACTGT 851 GTGCCAAGTT CAGCAGGGAA CGGCTGAGGT
TGGCTTGGGT AACGGTTGGT 901 GCGTTGGGTT TGACGGTTTG CGGCTTGGTT
TTGGTGTGGC TGACGCACGG 951 ACACCGTTTT GAAGGGCTGA ACGGCATTTT
TTGGTTTTTA TCGCAAGGAT 1001 GGGCATATCC CGTGATGGCG GTGATGACGC
TGATCGGCTT TTTCGGCGGA 1051 TTTTTCTCCG TTCCGCTCTA TACCTGGCTG
CAAACCGCCA GTAGCGAGAC 1101 TTTCCGCGCC CGCGCCGTTG CCGCCAACAA
TATCGTTAAC GGTATTTTTA 1151 TGGTTTCCGC TGCCGTTTTG AGCGCGGTGT
TGCTGTTTTT GTTTGACAGC 1201 ATTTCCTTGT TGTATCTGAT TGTCGCTTTG
GGCAATATTC CGTTGTCGGT 1251 ATTTTTGATT AAGCGCGAAA GGCGGTTTTT
AGGCGCGGCG GCAATCAGGA 1301 AAAAACCTTG A
This corresponds to the amino acid sequence <SEQ ID 856; ORF
232.a>:
TABLE-US-01099 a232.pep 1 MYAKKGGLGL VKSRRFAPLF ATQFLGAFND
NVFKTALFVM IGFYGLGQNG 51 FLPAGQMLNL GALLFILPYF LFSSLSGQLG
NKFDKAVLAR WAKVLEMIIM 101 AVAAYGFYIR SAPLLLACLF CMGAQSTLFG
PLKYAILPDY LDDKELMMGN 151 SLIESGTFVA ILFGQILGTA VAGVPPYIVG
ILVLLVAVGG TVGSLFMPSV 201 PAKAADTQIE WNIVRGTKSL LRETVRHKPV
FTAIIGISWF WFVGAVYTTQ 251 LPTFTQIHLG GNDNVFNLML ALFSIGIAAG
SVLCAKFSRE RLRLAWVTVG 301 ALGLTVCGLV LVWLTHGHRF EGLNGIFWFL
SQGWAYPVMA VMTLIGFFGG 351 FFSVPLYTWL QTASSETFRA RAVAANNIVN
GIFMVSAAVL SAVLLFLFDS 401 ISLLYLIVAL GNIPLSVFLI KRERRFLGAA AIRKKP*
m232/a232 95.9% identity in 290 aa overlap 10 20 30 m232.pep
MMGNSLIESGTFVAILFGQILGTAVAGVPP |||||||||||||||||||||||||||||| a232
ACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVAILFGQILGTAVAGVPP 120
130 140 150 160 170 40 50 60 70 80 90 m232.pep
YIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTKSLLRETVRHKPVFTAIIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a232
YIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTKSLLRETVRHKPVFTAIIG 180
190 200 210 220 230 100 110 120 130 140 150 m232.pep
ISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIGIAAGSVLCAKFSXERLMLAW
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| a232
ISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIGIAAGSVLCAKFSRERLRLAW 240
250 260 270 280 290 160 170 180 190 200 210 m232.pep
VTVGALGLTVCGLVLVWLTHGHRFEGLNGIFXFLSQGWAYPVMAVMTLIGFFGGFFSVPL
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| a232
VTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGWAYPVMAVMTLIGFFGGFFSVPL 300
310 320 330 340 350 220 230 240 250 260 m232.pep
YT-VQTAIARFPRP-AVAANNIVNGIFMVSAAVLSAVLLFLFDSISLLYLIVALGNIPLS ||
:||| :: | ||||||||||||||||||||||||||||||||||||||||||||| a232
YTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSAVLLFLFDSISLLYLIVALGNIPLS 360
370 380 390 400 410 270 280 289 m232.pep VFLIKRERRFLGAAAIRKKPX
||||||||||||||||||||| a232 VFLIKRERRFLGAAAIRKKPX 420 430
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 857>:
TABLE-US-01100 g233.seq 1 atgaaacgca aaaatatcgc gctgattccc
gccgccggca tcggggtgcg 51 tttcggtgcg gacaaaccca agcaatatgt
cgaaatcgga agcaaaaccg 101 ttttagaaca tgtacttggg atttttgaac
ggcatgaggc cgtcgatttg 151 accgtcgttg tcgtctcgcc cgaagacacg
tttgccgata aggttcagac 201 ggcatttcca caggttcggg tgtggaaaaa
cggtggacag acccgcgccg 251 aaactgtccg caacggtgtg gcaaaactgt
tggaaaccgg tttggcggcg 301 gaaaccgaca atattctggt acacgatgcc
gcccgctgct gcctgccgtc 351 tgaagctctg gcgcggttga tagaacaggc
gggcaacgcc gccgaaggcg 401 ggattttggc agttcccgtt gccgatacgc
tcaagcgcgc agaaagcgga 451 caaatcagtg caactgtcga ccgttcgggg
ctttggcagg cgcaaacgcc 501 gcagcttttt caagcgggtt tgctgcaccg
cgcattggct gcggaaaact 551 tgggcggcat taccgatgaa gcgtccgccg
tggaaaaact gggtgtgcgt 601 ccgctactga tacagggcga cgcgcgcaat
ttgaaactga cgcagccgca 651 ggacgcatac atcgtcaggc tgctgctcaa
tgccgtctga
This corresponds to the amino acid sequence <SEQ ID 858; ORF
233.ng>:
TABLE-US-01101 g233.pep 1 MKRKNIALIP AAGIGVRFGA DKPKQYVEIG
SKTVLEHVLG IFERHEAVDL 51 TVVVVSPEDT FADKVQTAFP QVRVWKNGGQ
TRAETVRNGV AKLLETGLAA 101 ETDNILVHDA ARCCLPSEAL ARLIEQAGNA
AEGGILAVPV ADTLKRAESG 151 QISATVDRSG LWQAQTPQLF QAGLLHRALA
AENLGGITDE ASAVEKLGVR 201 PLLIQGDARN LKLTQPQDAY IVRLLLNAV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 859>:
TABLE-US-01102 m233.seq (partial) 1 ATGAAGCGCA AAAATATCGC
GCTGATTCCC GCCGCCGGCA TCGGGGCGCG 51 TTTCGGTGCG GACAAACCCA
AGCAATATGT CGAAATCGGA AGCAAAACCG 101 TTTTAGAACA TACGATTGGG
ATTTTTGAAC GGCATGAGGC CGTCGATTTG 151 ACCGTCGTTG TCGTCTCGCC
CGAAGACACG TTTGCCGATA AGGTTCAGAC 201 GGCATTTCCA CAGGTTCGGG
TGTGGAAAAA CGGCGGACAG ACCCGCGCCG 251 AAACCGTCCG CAACGGTGTG
GCAAAACTGT TGGAAACCGG TTTGGCGGCG 301 GAAACCGACA ATATTCTGGT
ACACGATGCC GCGCGTTGCT GCCTGCCGTC 351 TGAAGCTTTG ACGCGGTTGA
TAGAACAGGC GGGCAACGCC GCCGAAGGCG 401 GGATTTTGGC AATTCCCATT
GCCGATACGC TCAAGTGCGC GGACGGTGGG 451 AACATT....
This corresponds to the amino acid sequence <SEQ ID 860; ORF
233>:
TABLE-US-01103 m233.pep (partial) 1 MKRKNIALIP AAGIGARFGA
DKPKQYVEIG SKTVLEHTIG IFERHEAVDL 51 TVVVVSPEDT FADKVQTAFP
QVRVWKNGGQ TRAETVRNGV AKLLETGLAA 101 ETDNILVHDA ARCCLPSEAL
TRLIEQAGNA AEGGILAIPI ADTLKCADGG 151 NI....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 233
shows 93.4% identity over a 152 aa overlap with a predicted ORF
(ORF 233.ng) from N. gonorrhoeae:
TABLE-US-01104 m233/g233 10 20 30 40 50 60 m233.pep
MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFERHEAVDLTVVVVSPEDT
|||||||||||||||:|||||||||||||||||||||::||||||||||||||||||||| g233
MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDT 10 20
30 40 50 60 70 80 90 100 110 120 m233.pep
FADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g233
FADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEAL 70 80
90 100 110 120 130 140 150 m233.pep
TRLIEQAGNAAEGGILAIPIADTLKCADGGNI :||||||||||||||||:|:||||| |::|:|
g233 ARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALA
130 140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 861>:
TABLE-US-01105 a233.seq 1 ATGAAGCGCA AAAATATCGC GCTGATTCCC
GCCGCCGGCA TCGGGGCGCG 51 TTTCGGTGCG GACAAACCCA AGCAATATGT
CGAAATCGGA AGCAAAACCG 101 TTTTAGAACA TACGATTGGG ATTTTTGAAC
GGCATGAGGC CGTCGATTTG 151 ACCGTCGTTG TCGTCTCGCC CGAAGACACG
TTTGCCGATA AGGTTCAGAC 201 GGCATTTCCA CAGGTTCGGG TGTGGAAAAA
CGGCGGACAG ACCCGCGCCG 251 AAACTGTCCG CAACGGTGTG GCAAAATTGT
TGGAAACCGG TTTGGCGGCG 301 GAAACCGACA ATATTCTGGT ACACGATGCC
GCGCGTTGCT GCCTGCCGTC 351 TGAAGCTTTG ACGCGGTTGA TAGAACAGGC
GGGCAACGCT GCCGAAGGTG 401 GGATTTTGGC AATTCCCGTT GCCGATACGC
TCAAGTGCGC GGACGGTGGG 451 AACATTAGTG CAACCGTCGA GCGGACGAGC
CTTTGGCAGG CGCAAACGCC 501 GCAGCTTTTC CGCGCCGGGC TGCTGCACCG
CGCATTGGCT GCGGAAAACT 551 TGGACGGCAT TACCGATGAA GCGTCCGCCG
TGGAAAAATT GGGCATCCGC 601 CCTTTGCTGG TGCAGGGCGA CGCGCGCAAT
TTGAAACTGA CGCAGCCGCA 651 GGACGCATAC ATCGTCAGGC TGCTGCTCGA
TGCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 862; ORF
233.a>:
TABLE-US-01106 a233.pep 1 MKRKNIALIP AAGIGARFGA DKPKQYVEIG
SKTVLEHTIG IFERHEAVDL 51 TVVVVSPEDT FADKVQTAFP QVRVWKNGGQ
TRAETVRNGV AKLLETGLAA 101 ETDNILVHDA ARCCLPSEAL TRLIEQAGNA
AEGGILAIPV ADTLKCADGG 151 NISATVERTS LWQAQTPQLF RAGLLHRALA
AENLDGITDE ASAVEKLGIR 201 PLLVQGDARN LKLTQPQDAY IVRLLLDAV*
m233/a233 99.3% identity in 152 aa overlap 10 20 30 40 50 60
m233.pep
MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFERHEAVDLTVVVVSPEDT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a233
MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFERHEAVDLTVVVVSPEDT 10 20
30 40 50 60 70 80 90 100 110 120 m233.pep
FADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a233
FADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEAL 70 80
90 100 110 120 130 140 150 m233.pep
TRLIEQAGNAAEGGILAIPIADTLKCADGGNI |||||||||||||||||||:||||||||||||
a233 TRLIEQAGNAAEGGILAIPVADTLKCADGGNISATVERTSLWQAQTPQLFRAGLLHRALA
130 140 150 160 170 180 a233
AENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQDAYIVRLLLDAVX 190 200 210 220
230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 863>:
TABLE-US-01107 g234.seq 1 atgaaaaccg tttccgccgc catcgctttt
gccgccgctg ccgtttcact 51 gaccggctgt gcgaccgagt cctcacgcag
cctcgaggtt gcaaaagtcg 101 cctcctgcaa tacgcaatat cacggtgttc
gcaccccgat ttccgtcgga 151 acattcgaca accgctccag cttccaaaaa
ggcattttct ccgacagtga 201 agaccgtctg ggcagccagg caaaaaccat
cctggtaaca cacctgcaac 251 aaaccaaccg cttcaacgta ctgaaccgca
ccaaccttag cgcattgaaa 301 caggaatccg gcatttccgg caaagcgcag
aacctgaaag gcgcagatta 351 tgtcgttacc ggcgatgtaa ccgaattcgg
acgcagagat gtcggcgatc 401 atcagctctt cggcattttg ggtcgcggca
aatcgcaaat cgcctatgca 451 aaagtggctc tgaatatcgt caacgtcaat
acttccgaaa tcgtctattc 501 cacacagggc gcgggcgaat acgcactttc
caaccgcgaa atcatcggtt 551 tcggcggcac ttccggctac gatgcgactt
tgaacggcaa agttttagac 601 ttggcaatcc gcgaagccgt cgacaacttg
gttcaggctg tcgacaacgg 651 cgcatggcaa tccaaccgtt aa
This corresponds to the amino acid sequence <SEQ ID 864; ORF
234.ng>:
TABLE-US-01108 g234.pep 1 MKTVSAAIAF AAAAVSLTGC ATESSRSLEV
AKVASCNTQY HGVRTPISVG 51 TFDNRSSFQK GIFSDSEDRL GSQAKTILVT
HLQQTNRFNV LNRTNLSALK 101 QESGISGKAQ NLKGADYVVT GDVTEFGRRD
VGDHQLFGIL GRGKSQIAYA 151 KVALNIVNVN TSEIVYSTQG AGEYALSNRE
IIGFGGTSGY DATLNGKVLD 201 LAIREAVDNL VQAVDNGAWQ SNR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 865>:
TABLE-US-01109 m234.seq (partial) 1 ...GGCGCGGGCG AATACGCACT
TTCCAACCGt GAAATCATCG GTTTCGGCGG 51 CACTTCCGGC TACGATGCGA
CTTTGAACGG CAAAGTTTTA GACTTGGCAA 101 TCCGCGAAGC .gTCAACAGC
CTGGTTCAGG CTGTTGACAA CGGCGCATGG 151 CAACCCAACC GTTAA
This corresponds to the amino acid sequence <SEQ ID 866; ORF
234>:
TABLE-US-01110 m234.pep (partial) 1 ..GAGEYALSNR EIIGFGGTSG
YDATLNGKVL DLAIREAVNS LVQAVDNGAW 51 QPNR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 234
shows 94.4% identity over a 54 aa overlap with a predicted ORF (ORF
234.ng) from N. gonorrhoeae:
TABLE-US-01111 m234/g234 10 20 30 m234.pep
GAGEYALSNREIIGFGGTSGYDATLNGKVL |||||||||||||||||||||||||||||| g234
LGRGKSQIAYAKVALNIVNVNTSEIVYSTQGAGEYALSNREIIGFGGTSGYDATLNGKVL 140
150 160 170 180 190 40 50 m234.pep DLAIREAVNSLVQAVDNGAWQPNRX
||||||||::||||||||||| ||| g234 DLAIREAVDNLVQAVDNGAWQSNRX 200 210
220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 867>:
TABLE-US-01112 a234.seq (partial) 1 AACCGCACCT ATTTGAACGC
ATTAAAACAG GAATCCGGCA TTTCCGGCAA 51 AGCGCATAAC CTGAAAGGCG
CAAATTATGT CGNNACCGGC GATGTAACCG 101 AATTCGGACG CANAGATGTC
GGCGATCATC AGCTCTTCGG CATTTTGGGT 151 CGCGGCAAAT CGCAAATCGC
CTATGCAAAA GTGGCTCTGA ATATCGTCAA 201 CGTCAATACT TCCGAAATCG
TCTATTCCGC ACAGGGCGCG GGCGAATACG 251 CACTTTCCAA CCGTGAAATC
ATCGGTTTCG GCGGCACTTC CGGCTACGAT 301 GCGACTTTGA ACGGCAAAGT
TTTAGACTTG GCAATCCGCG AAGCCGTCAA 351 CAGCCTGGTT CAGGCTGTTG
ACAACGGCGC ATGGCAACCC AACCGTTAA
This corresponds to the amino acid sequence <SEQ ID 868; ORF
234.a>:
TABLE-US-01113 a234.pep (partial) 1 NRTYLNALKQ ESGISGKAHN
LKGANYVXTG DVTEFGRXDV GDHQLFGILG 51 RGKSQIAYAK VALNIVNVNT
SEIVYSAQGA GEYALSNREI IGFGGTSGYD 101 ATLNGKVLDL AIREAVNSLV
QAVDNGAWQP NR* m234/a234 100.0% identity in 54 aa overlap 10 20 30
m234.pep GAGEYALSNREIIGFGGTSGYDATLNGKVL
|||||||||||||||||||||||||||||| a234
LGRGKSQIAYAKVALNIVNVNTSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVL 50 60
70 80 90 100 40 50 m234.pep DLAIREAVNSLVQAVDNGAWQPNRX
||||||||||||||||||||||||| a234 DLAIREAVNSLVQAVDNGAWQPNRX 110 120
130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 869>:
TABLE-US-01114 g235.seq 1 atgaaacctt tgattttagg gcttgccgcc
gtgttggctc tgtctgcctg 51 ccaagttcga aaagctcccg acctcgacta
cacgtcattc aaagaaagca 101 aaccggcttc aattttggtg gttccgccgc
tgaacgagtc gcctgatgtc 151 aacggcactt gggggatgct ggcttcgacc
gccgcgccga tttccgaagc 201 cggctattac gtctttcccg ccgcagtcgt
ggaggaaacc ttcaaagaaa 251 acggcttgac caatgccgcc gatattcacg
ccgtccggcc ggaaaaactg 301 catcaaattt tcggcaatga tgcggttttg
tacattacgg ttaccgaata 351 cggcacttca tatcaaattt tagacagcgt
gacgaccgta tccgccaaag 401 cacggctggt cgattcccgc aacgggaaag
agttgtggtc gggttcggcc 451 agcatccgcg aaggcagcaa caacagcaac
agcggcctgt tgggggcttt 501 ggtcggcgca gtggtcaatc agattgccaa
cagcctgacc gaccgcggtt 551 atcaggtttc caaaaccgcc gcatacaacc
tactgtcgcc ctattcccgc 601 aacggtatct tgaaaggtcc gagattcgtc
gaagagcagc ccaaataa
This corresponds to the amino acid sequence <SEQ ID 870; ORF
235.ng>:
TABLE-US-01115 g235.pep 1 MKPLILGLAA VLALSACQVR KAPDLDYTSF
KESKPASILV VPPLNESPDV 51 NGTWGMLAST AAPISEAGYY VFPAAVVEET
FKENGLTNAA DIHAVRPEKL 101 HQIFGNDAVL YITVTEYGTS YQILDSVTTV
SAKARLVDSR NGKELWSGSA 151 SIREGSNNSN SGLLGALVGA VVNQIANSLT
DRGYQVSKTA AYNLLSPYSR 201 NGILKGPRFV EEQPK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 871>:
TABLE-US-01116 m235.seq 1 ATGAAACCTT TGATTTTAGG GCTTGCCGCC
GTGTTGGCGC TGTCTGCCTG 51 CCAAGTTCAA AAAGCGCCCG ATTTCGACTA
CACGTCATTC AAGGAAAGCA 101 AACCGGCTTC AATTTTGGTG GTTCCGCCGC
TGAACGAATC GCCCGATGTC 151 AACGGAACAT GGGGTGTACT GGCTTCGACC
GCCGCGCCGC TTTCCGAAGC 201 CGGCTATTAC GTCTTCCCCG CCGCAGTCGT
GGAGGAAACC TTCAAACAAA 251 ACGGCTTGAC CAATGCCGCC GATATTCACG
CCGTCCGGCC GGAAAAACTG 301 CATCAGATTT TCGGCAATGA TGCGGTTTTG
TACATTACGG TTACCGAATA 351 CGGCACTTCA TATCAAATTT TAGACAGCGT
GACGACCGTA TCCGCCAAAG 401 CACGGCTGGT CGATTCCCGC AACGGAAAAG
AGTTGTGGTC GGGTTCGGCC 451 AGCATCCGCG AAGGCAGCAA CAACAGCAAC
AGCGGCCTGT TGGGGGCTTT 501 GGTCAGCGCA GTGGTCAATC AGATTGCCAA
CAGCCTGACC GACCGCGGTT 551 ATCAGGTTTC CAAAACCGCC GCATACAACC
TGCTGTCGCC CTATTCTCAC 601 AACGGCATCT TGAAAGGTCC GAGATTCGTT
GAAGAGCAGC CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 872; ORF
235>:
TABLE-US-01117 m235.pep 1 MKPLILGLAA VLALSACQVQ KAPDFDYTSF
KESKPASILV VPPLNESPDV 51 NGTWGVLAST AAPLSEAGYY VFPAAVVEET
FKQNGLTNAA DIHAVRPEKL 101 HQIFGNDAVL YITVTEYGTS YQILDSVTTV
SAKARLVDSR NGKELWSGSA 151 SIREGSNNSN SGLLGALVSA VVNQIANSLT
DRGYQVSKTA AYNLLSPYSH 201 NGILKGPRFV EEQPK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 235
shows 96.7% identity over a 215 aa overlap with a predicted ORF
(ORF 235.ng) from N. gonorrhoeae:
TABLE-US-01118 m235/g235 10 20 30 40 50 60 m235.pep
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLAST
|||||||||||||||||||:||||:||||||||||||||||||||||||||||||:|||| g235
MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPLNESPDVNGTWGMLAST 10 20
30 40 50 60 70 80 90 100 110 120 m235.pep
AAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTS
|||:||||||||||||||||||:||||||||||||||||||||||||||||||||||||| g235
AAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTS 70 80
90 100 110 120 130 140 150 160 170 180 m235.pep
YQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSNSGLLGALVSAVVNQIANSLT
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| g235
YQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSNSGLLGALVGAVVNQIANSLT 130
140 150 160 170 180 190 200 210 m235.pep
DRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPKX
|||||||||||||||||||:|||||||||||||||| g235
DRGYQVSKTAAYNLLSPYSRNGILKGPRFVEEQPKX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 873>:
TABLE-US-01119 a235.seq 1 ATGAAACCTT TGATTTTAGG GCTTGCCGCC
GTGTTGGCGC TGTCTGCCTG 51 CCAAGTTCAA AAAGCGCCCG ATTTCGACTA
CACGTCATTC AAGGAAAGCA 101 AACCGGCTTC AATTTTGGTG GTTCCGCCGC
TGAACGAATC GCCCGATGTC 151 AACGGAACAT GGGGTGTACT GGCTTCGACC
GCCGCGCCGC TTTCCGAAGC 201 CGGCTATTAC GTCTTCCCCG CCGCAGTCGT
GGAGGAAACC TTCAAACAAA 251 ACGGCTTGAC CAATGCCGCC GATATTCACG
CCGTCCGGCC GGAAAAACTG 301 CATCAGATTT TCGGCAATGA TGCGGTTTTG
TACATTACGG TTACCGAATA 351 CGGCACTTCA TATCAAATTT TAGACAGCGT
GACGACCGTA TCCGCCAAAG 401 CACGGCTGGT CGATTCCCGC AACGGAAAAG
AGTTGTGGTC GGGTTCGGCC 451 AGCATCCGCG AAGGCAGCAA CAACAGCAAC
AGCGGCCTGT TGGGGGCTTT 501 GGTCAGCGCA GTGGTCAATC AGATTGCCAA
CAGCCTGACC GACCGCGGTT 551 ATCAGGTTTC TAAAACCGCC GCATACAACC
TGCTGTCGCC CTATTCTCAC 601 AACGGCATCT TGAAAGGTCC GAGATTCGTC
GAAGAGCAGC CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 874; ORF
235.a>:
TABLE-US-01120 a235.pep 1 MKPLILGLAA VLALSACQVQ KAPDFDYTSF
KESKPASILV VPPLNESPDV 51 NGTWGVLAST AAPLSEAGYY VFPAAVVEET
FKQNGLTNAA DIHAVRPEKL 101 HQIFGNDAVL YITVTEYGTS YQILDSVTTV
SAKARLVDSR NGKELWSGSA 151 SIREGSNNSN SGLLGALVSA VVNQIANSLT
DRGYQVSKTA AYNLLSPYSH 201 NGILKGPRFV EEQPK* m235/a235 100.0%
identity in 215 aa overlap 10 20 30 40 50 60 m235.pep
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLAST
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a235
MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLAST 10 20
30 40 50 60 70 80 90 100 110 120 m235.pep
AAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a235
AAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTS 70 80
90 100 110 120 130 140 150 160 170 180 m235.pep
YQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSNSGLLGALVSAVVNQIANSLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a235
YQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSNSGLLGALVSAVVNQIANSLT 130
140 150 160 170 180 190 200 210 m235.pep
DRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPKX
|||||||||||||||||||||||||||||||||||| a235
DRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPKX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 875>:
TABLE-US-01121 g236.seq 1 ATGGCGCGTT TCGCCTTCTC CGCCGACATT
CTCCGCACAG CGTTTGCAGA 51 CGGTTTCATA ACCTGCAACC GCGCCCACAT
CGCGGGTGTA ATGCCAGCAG 101 CGTTCGCATT TTTCGCCGTC GCTGGCTTTG
GCGGCAACGG CAAGTTCATC 151 ACCGACTTTC ACTTCTGCTT TAGACACCAG
CAGGGCAAAG CGCAATTCTT 201 CGCCCAAAGC ATTCAGATAG CCGGCCATTT
CTTCCGGCGC GGTAATTTCG 251 GCTTCCGCCT GCAAggacga accgacagTT
TTGTcggcGC GCAAAGGCTC 301 GAtagcggcg gTTACTGCTT CGCGCGCTTC
GCGGATTGCC GTCCATTTTT 351 TCACCAGTTC GGCTTCGGCT TTTTCGTTGA
TGGCCGGGAA CTCGTGCCAA 401 GTATGGAAGA GGACGCTGTC TTCTTCGCCG
CCGCCGATGA TGTCCCACGC 451 TTCTTCGCCG GTGAAGCACA AAATCGGTGC
AATCAAGAGA ACCAGGCTGC 501 GCGTGATGTG GTACAGGGCG GTTTGCGCGC
TGCGGCGGGC GCGGCTGTCG 551 GCTTTGGTGG TGTAGAGGCG GTCTTTCAGG
ATGTCGAGGT AGAACGCGCC 601 CAAGTCTTCC GAGCAGAAAG AAACAATGTC
TTTCACGGCG AAGTGGAAGG 651 CATAGCGCGG ATAGTAACCG CCTGCCAAAC
GCTCTTGCAG CCGCCGCGCC 701 AATACCAAGG CGTAGCGGTC GATTTCCACC
ATATCCGCCT GTTGCACGGC 751 ATCTTCAATC GGATTAAAGT CGCTCAAATT
GGCAAAcagG AAGCTCAAGG 801 TATTGCGGAT GCGGCGGTAG CTTTCGGTAA
CGCGTTTGAG GATTTCTTTG 851 GAAatcgCCA ATtcgccgct gTAATCGGTG
GATGCCGCCC ACAGGCGCAG 901 GATGTCCGCG CCGAATTCGT TATAGACTTC
CTGCGGCGCG ACGACGTTGC 951 CGATGGATTT CGACATTTTG CGGCCGTTTT
GGTCAACCAC GAAACCGTGG 1001 GTCAGCAGCT GTTTATACGG TGCGCGTCCC
ATGGATGA
This corresponds to the amino acid sequence <SEQ ID 876; ORF
236.ng>:
TABLE-US-01122 g236.pep 1 MARFAFSADI LRTAFADGFI TCNRAHIAGV
MPAAFAFFAV AGFGGNGKFI 51 TDFHFCFRHQ QGKAQFFAQS IQIAGHFFRR
GNFGFRLQGR TDSFVGAQRL 101 DSGGYCFARF ADCRPFFHQF GFGFFVDGRE
LVPSMEEDAV FFAAADDVPR 151 FFAGEAQNRC NQENQAARDV VQGGLRAAAG
AAVGFGGVEA VFQDVEVERA 201 QVFRAERNNV FHGEVEGIAR IVTACQTLLQ
PPRQYQGVAV DFHHIRLLHG 251 IFNRIKVAQI GKQEAQGIAD AAVAFGNAFE
DFFGNRQFAA VIGGCRPQAQ 301 DVRAEFVIDF LRRDDVADGF RHFAAVLVNH
ETVGQQLFIR CASHG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 877>:
TABLE-US-01123 m236.seq (partial) 1 ..TTGCACGGAC GAACCGACGG
TTTTGTCGGC GCGCAAAGGC TCGATGGCGG 51 CGGTTACCGC TTCGCGGGCT
TCGCGGATTG CCGTCCATTT TTTCACCAGT 101 TCGGCTTCGG TTTTTTCGTT
GATGGTCGGG AACTCGTGCC AAGTATGGAA 151 GAGGACGCTG TCkTCTTCGC
CGCCGCCGwT GAyGTCCCAC GCTTCTTCGC 201 CGGTGAAGCA CAAAATCGGT
GCAATCAAGA GAACCAAACT GCGTGTGATG 251 TGATACAGGG CAGTTTGTGC
GCTGCGGCGT GCATGGCTGT CTGCTTTGGT 301 GGTGTAGAGG CGGTCTTTCA
GGATGTCGAG GTAGAACGCA CCCAAGTCTT 351 CCGAGCAGAA AGAAACArTG
TCTTTTACGG CAAAGTGGaA kGCATAACGC 401 GGATAGTAAT CGCCTGCCAG
ACACTCTTGC AGCTGACGTG CCAATACCAC 451 GGCGTAGCGG TCGATTTCCA
CCATATCCGC CTGTTGCACG GCATCTTCAA 501 TCGGATTAAA GTCGCTCAAG
TTGGCAAACA AAAAGCTCAA GGTATTGCGG 551 ATACGGCGGT AgCTTTCGGT
TACGCGTTTG AGGATTTCTT TGGAAATCGC 601 CAATTCGCCG CTGTAATCGG
TAGATGCCGC CCACAGGCGC AGGATGTCTG 651 CGCCGAATTC GTTATAAACC
TCTTGCGGTG CAACGACGTT GCCGATGGAT 701 TTCGACATTT TTTTGCCTTC
GCCGTCGACA ACGAAACCAT GGGTCAGCAG 751 CTGTTTATAC GGCGCGCGAC
CCATTGA
This corresponds to the amino acid sequence <SEQ ID 878; ORF
236>:
TABLE-US-01124 m236.pep (partial) 1 ..LHGRTDGFVG AQRLDGGGYR
FAGFADCRPF FHQFGFGFFV DGRELVPSME 51 EDAVXFAAAX DVPRFFAGEA
QNRCNQENQT ACDVIQGSLC AAACMAVCFG 101 GVEAVFQDVE VERTQVFRAE
RNXVFYGKVE XITRIVIACQ TLLQLTCQYH 151 GVAVDFHHIR LLHGIFNRIK
VAQVGKQKAQ GIADTAVAFG YAFEDFFGNR 201 QFAAVIGRCR PQAQDVCAEF
VINLLRCNDV ADGFRHFFAF AVDNETMGQQ 251 LFIRRATH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 236
shows 82.9% identity over a 258 aa overlap with a predicted ORF
(ORF 236.ng) from N. gonorrhoeae:
TABLE-US-01125 m236/g236 10 20 30 m236.pep
LHGRTDGFVGAQRLDGGGYRFAGFADCRPF |:||||:||||||||:||| || ||||||| g236
FRHQQGKAQFFAQSIQIAGHFFRRGNFGFRLQGRTDSFVGAQRLDSGGYCFARFADCRPF 60 70
80 90 100 110 40 50 60 70 80 90 m236.pep
FHQFGFGFFVDGRELVPSMEEDAVXFAAAXDVPRFFAGEAQNRCNQENQTACDVIQGSLC
|||||||||||||||||||||||| |||| |||||||||||||||||||:| ||:||:| g236
FHQFGFGFFVDGRELVPSMEEDAVFFAAADDVPRFFAGEAQNRCNQENQAARDVVQGGLR 120
130 140 150 160 170 100 110 120 130 140 150 m236.pep
AAACMAVCFGGVEAVFQDVEVERTQVFRAERNXVFYGKVEXITRIVIACQTLLQLTCQYH ||| ||
|||||||||||||||:|||||||| ||:|:|| |:||| ||||||| ||: g236
AAAGAAVGFGGVEAVFQDVEVERAQVFRAERNNVFHGEVEGIARIVTACQTLLQPPRQYQ 180
190 200 210 220 230 160 170 180 190 200 210 m236.pep
GVAVDFHHIRLLHGIFNRIKVAQVGKQKAQGIADTAVAFGYAFEDFFGNRQFAAVIGRCR
|||||||||||||||||||||||:|||:||||||:||||| |||||||||||||||| || g236
GVAVDFHHIRLLHGIFNRIKVAQIGKQEAQGIADAAVAFGNAFEDFFGNRQFAAVIGGCR 240
250 260 270 280 290 220 230 240 250 259 m236.pep
PQAQDVCAEFVINLLRCNDVADGFRHFFAFAVDNETMGQQLFIRRATHX |||||| |||||::||
:||||||||| | |::||:||||||| |:| g236
PQAQDVRAEFVIDFLRRDDVADGFRHFAAVLVNHETVGQQLFIRCASHG 300 310 320 330
340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 879>:
TABLE-US-01126 a236.seq 1 ATGGCGCGTT TCGCCTTCTC CGCCGACATT
CTCTGCACAG CGTTTGCAGA 51 CGGTTTCATG GCCTGCAACC GCGCCCACAT
CGCGGGTGTA GTGCCAGCAG 101 CGTTCGCATT TTTCACCATC ACTGGCTTTA
GCGGCAACGG CAAGTTCGCT 151 GCCTACTTTC ACTTCTGCTT TAGACACCAG
CAAAGCAAAG CGCAATTCTT 201 CGCCCAAAGC ATTCAGATAG CCGGCCATTT
CTTCCGGCGC GGTAATTTCG 251 GCTTCGGCTT GCAAGGACGA ACCGACGGTT
TTGTCGGCGC GCAAAGGCTC 301 GATGGCGGCG GTTACCGCTT CGCGGGCTTC
GCGGATTGCC GTCCATTTTT 351 TCACCAGTTC GGCTTCGGCT TTTTCGTTGA
TGGTCGGGAA CTCGTGCCAA 401 GTATGGAAAA GCACGCTGTC TTCTGCGCCG
CCGCCGATGA TGTCCCACGC 451 TTCTTCGCCG GTGAAGCACA AAATCGGTGC
AATCAAGAGA ACCAGGCTGC 501 GCGTGATGTG GTACAGGGCG GTTTGCGCGC
TGCGGCGGGC GCGGCTGTCG 551 GCTTTGGTGG TATAGAGGCG GTCTTTCAGG
ATATCGAGGT AGAACGCGCC 601 CAAGTCTTCC GAGCAGAAAG AAACCATTTC
TTTCACGGCA AAGTGGAAGG 651 CATAACGCGG ATAAAAATCA CCGGCAACGC
GTTCTTGCAG CCGCCTTGCC 701 AACACCAAGG CATAGCGGTC GATTTCCACC
ATATCCGCCT GTTGCACGGC 751 ATCTTCAATA GGATTGAAGT CGCTCAAGTT
GGCAAACAAA AAGCTCAAGG 801 TATTGCGGAT ACGGCGGTAG CTTTCGGTTA
CGCGCTTGAG GATTTCTTTG 851 GAAATCGCCA ATTCGCCGCT GTAATCGGTG
GATGCCGCCC ACAGGCGCAG 901 GATGTCCGCG CCGAACTCGT TATACACTTC
TTGCGGCGCG ACGACGTTGC 951 CGATGGATTT CGACATTTTG CGCCCGTTTT
GATCCACCAC GAAACCATGG 1001 GTCAGCAGCT GTTTGTACGG CGCGCGACCC
ATTGA
This corresponds to the amino acid sequence <SEQ ID 880; ORF
236.a>:
TABLE-US-01127 a236.pep 1 MARFAFSADI LCTAFADGFM ACNRAHIAGV
VPAAFAFFTI TGFSGNGKFA 51 AYFHFCFRHQ QSKAQFFAQS IQIAGHFFRR
GNFGFGLQGR TDGFVGAQRL 101 DGGGYRFAGF ADCRPFFHQF GFGFFVDGRE
LVPSMEKHAV FCAAADDVPR 151 FFAGEAQNRC NQENQAARDV VQGGLRAAAG
AAVGFGGIEA VFQDIEVERA 201 QVFRAERNHF FHGKVEGITR IKITGNAFLQ
PPCQHQGIAV DFHHIRLLHG 251 IFNRIEVAQV GKQKAQGIAD TAVAFGYALE
DFFGNRQFAA VIGGCRPQAQ 301 DVRAELVIHF LRRDDVADGF RHFAPVLIHH
ETMGQQLFVR RATH* m236/a236 81.0% identity in 258 aa overlap 10 20
30 m236.pep LHGRTDGFVGAQRLDGGGYRFAGFADCRPF
|:|||||||||||||||||||||||||||| a236
FRHQQSKAQFFAQSIQIAGHFFRRGNFGFGLQGRTDGFVGAQRLDGGGYRFAGFADCRPF 60 70
80 90 100 110 40 50 60 70 80 90 m236.pep
FHQFGFGFFVDGRELVPSMEEDAVXFAAAXDVPRFFAGEAQNRCNQENQTACDVIQGSLC
||||||||||||||||||||: || ||| |||||||||||||||||||:| ||:||:| a236
FHQFGFGFFVDGRELVPSMEKHAVFCAAADDVPRFFAGEAQNRCNQENQAARDVVQGGLR 120
130 140 150 160 170 100 110 120 130 140 150 m236.pep
AAACMAVCFGGVEAVFQDVEVERTQVFRAERNXVFYGKVEXITRIVIACQTLLQLTCQYH ||| ||
|||:||||||:||||:|||||||| |:|||| |||| |: :::|| ||:: a236
AAAGAAVGFGGIEAVFQDIEVERAQVFRAERNHFFHGKVEGITRIKITGNAFLQPPCQHQ 180
190 200 210 220 230 160 170 180 190 200 210 m236.pep
GVAVDFHHIRLLHGIFNRIKVAQVGKQKAQGIADTAVAFGYAFEDFFGNRQFAAVIGRCR
|:|||||||||||||||||:||||||||||||||||||||||:|||||||||||||| || a236
GIAVDFHHIRLLHGIFNRIEVAQVGKQKAQGIADTAVAFGYALEDFFGNRQFAAVIGGCR 240
250 260 270 280 290 220 230 240 250 259 m236.pep
PQAQDVCAEFVINLLRCNDVADGFRHFFAFAVDNETMGQQLFIRRATHX |||||| ||:||::||
:||||||||| : :||||||||:|||||| a236
PQAQDVRAELVIHFLRRDDVADGFRHFAPVLIHHETMGQQLFVRRATHX 300 310 320 330
340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 881>:
TABLE-US-01128 g237.seq 1 atgcgggaca aggttggcgg taatatcgca
ctccccgccc cacgaatatt 51 cgattctaac atcggcaagc tgcggaaaaa
ctttaagcat atcttggcgg 101 acaagctcgg tcatacgcgc aggattgtcg
ataaattcgt tatccttacc 151 gccgaaaagc agcctgccgt ccgcgctgag
gcggtaataa tccaaaatat 201 ggcggttgtc gcatactgcc atattgttgc
ggataagccc ttttgtgcgc 251 gcgcccaagg gttcggtggc aataataaag
gtgctgacgg caatcgcctt 301 gcgttccaaa ggccggaata tcgggttcaa
accgacataa gtattgacgg 351 catagaccac atttttacac tcgacgctgc
cttcgggcgt gtaaaccagc 401 caaccgtttt gatacggttc gatgcgcgtc
atcggggatt gctcgaaaat 451 ctgcgcgccg gcttcggcag cggcgctggc
aacacccaac gtgtaattga 501 gcggatgaag atgcccggac aagggatcga
actgtgcgcc ttggtacata 551 tcgctgtcaa gctgctgttt caactcggct
ttatcccaaa gttgataatg 601 actcgcaccg taatgccgtt gggcgtgttc
atgccactgc tgcaactctt 651 cccaatgctg cggacggacg gcaaccgtgg
cataaccgcg ctgccaatcg 701 caatcgatgg catgtttgcg gacgcgttcg
tccaccagtt cgaccgcctg 751 caaagactgt tgccaaaacc attgcgcctg
ctccaagccg acctgttttt 801 caatttcccc cataccgcag gcgtagtcgc
tgataacctg cccgccactc 851 ctgccggacg cgccgaagcc gatacgtgcg
gcttccaaaa cgacggcttc 901 atgtccgtgt tccgccagcg gcaatgcggt
acacaaaccg ctcaaaccgc 951 cgccgataat gcaggtttcg gctttcagac
ggcattggag tttcggataa 1001 acagtatgcg gattaaccga actaaaataa
taagaaggca gatattcttg 1051 aaaatcaggg cgaatcattg tgtttgcttt
atcgggtata ttttcggacg 1101 gaatgataca gactgtcggg ccatatcgtc
caaacagaaa atcggttga
This corresponds to the amino acid sequence <SEQ ID 882; ORF
237.ng>:
TABLE-US-01129 g237.pep 1 MRDKVGGNIA LPAPRIFDSN IGKLRKNFKH
ILADKLGHTR RIVDKFVILT 51 AEKQPAVRAE AVIIQNMAVV AYCHIVADKP
FCARAQGFGG NNKGADGNRL 101 AFQRPEYRVQ TDISIDGIDH IFTLDAAFGR
VNQPTVLIRF DARHRGLLEN 151 LRAGFGSGAG NTQRVIERMK MPGQGIELCA
LVHIAVKLLF QLGFIPKLIM 201 TRTVMPLGVF MPLLQLFPML RTDGNRGITA
LPIAIDGMFA DAFVHQFDRL 251 QRLLPKPLRL LQADLFFNFP HTAGVVADNL
PATPAGRAEA DTCGFQNDGF 301 MSVFRQRQCG TQTAQTAADN AGFGFQTALE
FRINSMRINR TKIIRRQIFL 351 KIRANHCVCF IGYIFGRNDT DCRAISSKQK IG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 883>:
TABLE-US-01130 m237.seq 1 ATGCGGGACA AGGTTGGCGG TAATGTCGCA
CTCCCCGCCC CACGAATATT 51 CGATTTTGAC ATCGGCAAGC TGCGGAAAAA
CTTTAAGCAT ATCTTGGCGG 101 ACAAGCTCGG TCATaCGCTC AGGATTGTCG
ATAAACTCGT TATCCTTACC 151 GCCGAAAAGC AGTCTGCCGT CCGCGCTGAG
GCGGTAATAA TCCAAAATAT 201 GGCGGTTGTC GCATACTGCC ATATTGTTAC
GGATAAGCCC TTTTGCGCGC 251 GCCCCCAAGG GTTCGGTCGC AATAATAAAG
GTGCTGACAG CAATCGCCTT 301 GCGTTCCAAA GGCCGGAATA TCGGGTTCAA
ACCTGCATAA GTATTGACAG 351 CATAGACCAC ATTTTTGCAC TCGACGCTGC
CTTCGGGCGT GTAAACCAGC 401 CAACCGTTTT GATGCGGTTC GATGCACGTC
ATCGGGGATT GCTCGAAAAT 451 CTGCGCACCG GCTTCGGCAG CGGCACGAGC
GATGCCCAAA GTGTAAGTGA 501 GCGGATGCAG GTGTCCGGAT AAGGGGTCGA
ATTGTGCCCC TTGGTACATA 551 TCGCTGTCAA GCTGCTGTTT CAACTCGGCT
TTATCCCAAA GTTGATAATG 601 ACTCGCACCG TAATGCCGTT GGGCGTGTTC
ATGCCACTGC TGCAACTCTT 651 CCCAATGCTG CGGACGGACG GCAACCGTGG
CATAACCGCG CTGCCAATCA 701 CAATCGACGG CATGTTTGCG GACGCGTTCG
TCCACCAGTT CGACCGCCTG 751 CAAAGACTGT TGCCAAAACC ATTGCGCCTG
CTCCAAGCCG ACCTGTTTTT 801 CAATTTCCCC CATACCGCAG nCGTAATCGC
TGATAACCTG CCCGCCACTC 851 CGTCCCGACG CGCCGAAACC GATACGCGCG
GCTTCCAACA CAACCGTTTC 901 ATGTCCCTGC TCCGCCAAGG GCAATGCAGT
GCACAAACCA CCCAATCCGC 951 CGCCGATGAT ACAGGTATCG GTTTTCAGAC
GGCATTGAAG TTtCGGATAA 1001 ACAGTATGAG GATTAACCGA ACTGAAATAA
TAAGAAGGCA GATATTCTTG 1051 AAAATCAGGG CGAATCATTG TGTTTGCTTT
ATCAGGTGTA TTTTCGGACG 1101 GAATGATACA GGCTGTCGGG CCATATCGTC
CAwACAGAAA ATCGGTTGA
This corresponds to the amino acid sequence <SEQ ID 884; ORF
237>:
TABLE-US-01131 m237.pep 1 MRDKVGGNVA LPAPRIFDFD IGKLRKNFKH
ILADKLGHTL RIVDKLVILT 51 AEKQSAVRAE AVIIQNMAVV AYCHIVTDKP
FCARPQGFGR NNKGADSNRL 101 AFQRPEYRVQ TCISIDSIDH IFALDAAFGR
VNQPTVLMRF DARHRGLLEN 151 LRTGFGSGTS DAQSVSERMQ VSGXGVELCP
LVHIAVKLLF QLGFIPKLIM 201 TRTVMPLGVF MPLLQLFPML RTDGNRGITA
LPITIDGMFA DAFVHQFDRL 251 QRLLPKPLRL LQADLFFNFP HTAXVIADNL
PATPSRRAET DTRGFQHNRF 301 MSLLRQGQCS AQTTQSAADD TGIGFQTALK
FRINSMRINR TEIIRRQIFL 351 KIRANHCVCF IRCIFGRNDT GCRAISSXQK IG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 237
shows 86.1% identity over a 382 aa overlap with a predicted ORF
(ORF 237.ng) from N. gonorrhoeae:
TABLE-US-01132 m237/g237 10 20 30 40 50 60 m237.pep
MRDKVGGNVALPAPRIFDFDIGKLRKNFKHILADKLGHTLRIVDKLVILTAEKQSAVRAE
||||||||:||||||||| :||||||||||||||||||| |||||:|||||||| ||||| g237
MRDKVGGNIALPAPRIFDSNIGKLRKNFKHILADKLGHTRRIVDKFVILTAEKQPAVRAE 10 20
30 40 50 60 70 80 90 100 110 120 m237.pep
AVIIQNMAVVAYCHIVTDKPFCARPQGFGRNNKGADSNRLAFQRPEYRVQTCISIDSIDH
||||||||||||||||:||||||| |||| ||||||:|||||||||||||| ||||:||| g237
AVIIQNMAVVAYCHIVADKPFCARAQGFGGNNKGADGNRLAFQRPEYRVQTDISIDGIDH 70 80
90 100 110 120 130 140 150 160 170 180 m237.pep
IFALDAAFGRVNQPTVLMRFDARHRGLLENLRTGFGSGTSDAQSVSERMQVSGXGVELCP
||:||||||||||||||:||||||||||||||:|||||::::| | |||:: | |:||| g237
IFTLDAAFGRVNQPTVLIRFDARHRGLLENLRAGFGSGAGNTQRVIERMKMPGQGIELCA 130
140 150 160 170 180 190 200 210 220 230 240 m237.pep
LVHIAVKLLFQLGFIPKLIMTRTVMPLGVFMPLLQLFPMLRTDGNRGITALPITIDGMFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| g237
LVHIAVKLLFQLGFIPKLIMTRTVMPLGVFMPLLQLFPMLRTDGNRGITALPIAIDGMFA 190
200 210 220 230 240 250 260 270 280 290 300 m237.pep
DAFVHQFDRLQRLLPKPLRLLQADLFFNFPHTAXVIADNLPATPSRRAETDTRGFQHNRF
||||||||||||||||||||||||||||||||| |:||||||||: |||:|| |||:: | g237
DAFVHQFDRLQRLLPKPLRLLQADLFFNFPHTAGVVADNLPATPAGRAEADTCGFQNDGF 250
260 270 280 290 300 310 320 330 340 350 360 m237.pep
MSLLRQGQCSAQTTQSAADDTGIGFQTALKFRINSMRINRTEIIRRQIFLKIRANHCVCF ||::||
||::||:|:|||::|:||||||:|||||||||||:|||||||||||||||||| g237
MSVFRQRQCGTQTAQTAADNAGFGFQTALEFRINSMRINRIKIIRRQIFLKIRANHCVCF 310
320 330 340 350 360 370 380 m237.pep IRCIFGRNDTGCRAISSXQKIGX |
||||||| |||||| ||||| g237 IGYIFGRNDTDCRAISSKQKIGX 370 380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 885>:
TABLE-US-01133 a237.seq 1 ATGCGGGACA AGGTTGGCGG TAATGTCGCA
CTCCCCGCCC CACGAATATT 51 CGATTTTGAC ATCGGCAAGC TGCGGAAAAA
CTTTAAGCAT ATCTTGGCGG 101 ACAAGCTCGG TCATACGCGC GGGATTGTCG
ATAAACTCGT TATCCTTACC 151 GCCGAAAAGC AGTCTGCCGT CCGCGCTGAG
GCGGTAATAA TCCAAAATAT 201 GACGGTTGTC GCATACTGCC ATATTGTTGC
GGATAAGCCC TTTTGCACGC 251 GCGCCCAAGG GTTCTGTGGC AATAATAAAG
GTGCTGACAG CAATCGCCTT 301 GCGCTCCAAA GGCTTGAATA TCGGATTCAA
ACCGGCATAA GTATTGACGG 351 CGTACACCAG ATTTTTGCAT TCGACGCTGC
CTTCGGGGGT GTAAACCAGC 401 CAACCGTTTT GATAAGGTTC AATGCGTATC
ATGGGAGAAT GCTCAAAAAT 451 CTTCGTACCA GCTTCGGCAG CGGCGCGGGC
GATGCCCAAC GTGTAATTGA 501 GCGGATGGAG ATGCCCGGAC AAGGGATCGA
ACTGTGCGCC TTGGTACATA 551 TCGCTGTCAA GCTGCTGCTT CAGTTCAGTG
TTATCCCAGA GTTGATAATG 601 AGTTGCACCG TAATATTTTT GGGCGTGCTC
ATGCCATTGT TGCAATTCTT 651 CCCAATGCTG CGAACGGATG GCAACCGTGG
CATAACCGCG CTGCCAATCG 701 CAATCAATGG CATGTTTGCG GACGCGTTCG
TCCACCAGTT CGACCGCCTG 751 CAAAGACTGT TGCCAAAACC ATTGCGCTTG
CTCCAAACCG ACCTGTTTTT 801 CAATTTCCTC CATACCGCAG GCGTAATCGC
TGATAACCTG CCCGCCACTC 851 CGTCCCGACG CGCCGAAACC GATACGCGCG
GCTTCCAACA CAACCGTTTC 901 ATGTCCCTGC TCCGCCAAGG GCAATGCAGT
GCACAAACCA CTCAATCCGC 951 CGCCGATGAT ACAGGTATCG GTTTTCAGAC
GGCATTGAAG TTTCGGATAA 1001 ACAGTATGAG GATTAACCGA ACTGAAATAA
TAAGAAGGCA GATATTCTTG 1051 AAAATCAGGG CGAATCATTG TGTTTGCTTT
ATCGGGTATA TTTTCGGACG 1101 GAATGATACA GGCTGTCGAG CCATATCGTC
CAAACAGAAA ATCGGTTGA
This corresponds to the amino acid sequence <SEQ ID 886; ORF
237.a>:
TABLE-US-01134 a237.pep 1 MRDKVGGNVA LPAPRIFDFD IGKLRKNFKH
ILADKLGHTR GIVDKLVILT 51 AEKQSAVRAE AVIIQNMTVV AYCHIVADKP
FCTRAQGFCG NNKGADSNRL 101 ALQRLEYRIQ TGISIDGVHQ IFAFDAAFGG
VNQPTVLIRF NAYHGRMLKN 151 LRTSFGSGAG DAQRVIERME MPGQGIELCA
LVHIAVKLLL QFSVIPELIM 201 SCTVIFLGVL MPLLQFFPML RTDGNRGITA
LPIAINGMFA DAFVHQFDRL 251 QRLLPKPLRL LQTDLFFNFL HTAGVIADNL
PATPSRRAET DTRGFQHNRF 301 MSLLRQGQCS AQTTQSAADD TGIGFQTALK
FRINSMRINR TEIIRRQIFL 351 KIRANHCVCF IGYIFGRNDT GCRAISSKQK IG*
m237/a237 85.6% identity in 382 aa overlap 10 20 30 40 50 60
m237.pep
MRDKVGGNVALPAPRIFDFDIGKLRKNFKHILADKLGHTLRIVDKLVILTAEKQSAVRAE
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| a237
MRDKVGGNVALPAPRIFDFDIGKLRKNFKHILADKLGHTRGIVDKLVILTAEKQSAVRAE 10 20
30 40 50 60 70 80 90 100 110 120 m237.pep
AVIIQNMAVVAYCHIVTDKPFCARPQGFGRNNKGADSNRLAFQRPEYRVQTCISIDSIDH
|||||||:||||||||:|||||:| ||| |||||||||||:|| |||:|| ||||:: : a237
AVIIQNMTVVAYCHIVADKPFCTRAQGFCGNNKGADSNRLALQRLEYRIQTGISIDGVHQ 70 80
90 100 110 120 130 140 150 160 170 180 m237.pep
IFALDAAFGRVNQPTVLMRFDARHRGLLENLRTGFGSGTSDAQSVSERMQVSGXGVELCP
|||:||||| |||||||:||:| :|:||||:||||::||| | |||:: | |:||| a237
IFAFDAAFGGVNQPTVLIRFNAYHGRMLKNLRTSFGSGAGDAQRVIERMEMPGQGIELCA 130
140 150 160 170 180 190 200 210 220 230 240 m237.pep
LVHIAVKLLFQLGFIPKLIMTRTVMPLGVFMPLLQLFPMLRTDGNRGITALPITIDGMFA
|||||||||:|:: ||:|||: ||: |||:|||||:|||||||||||||||||:|:|||| a237
LVHIAVKLLLQFSVIPELIMSCTVIFLGVLMPLLQFFPMLRTDGNRGITALPIAINGMFA 190
200 210 220 230 240 250 260 270 280 290 300 m237.pep
DAFVHQFDRLQRLLPKPLRLLQADLFFNFPHTAXVIADNLPATPSRRAETDTRGFQHNRF
||||||||||||||||||||||:|||||| ||| |||||||||||||||||||||||||| a237
DAFVHQFDRLQRLLPKPLRLLQTDLFFNFLHTAGVIADNLPATPSRRAETDTRGFQHNRF 250
260 270 280 290 300 310 320 330 340 350 360 m237.pep
MSLLRQGQCSAQTTQSAADDTGIGFQTALKFRINSMRINRTEIIRRQIFLKIRANHCVCF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a237
MSLLRQGQCSAQTTQSAADDIGIGFQTALKFRINSMRINRTEIIRRQIFLKIRANHCVCF 310
320 330 340 350 360 370 380 m237.pep IRCIFGRNDTGCRAISSXQKIGX |
|||||||||||||| ||||| a237 IGYIFGRNDTGCRAISSKQKIGX 370 380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 887>:
TABLE-US-01135 g238.seq 1 atgaatttgc ctattcaaaa attcatgatg
ctgttggcag cggcaatatc 51 gatgctgcat atccccatta gtcatgcgaa
cggtttggat gcccgtttgc 101 gcgatgatat gcaggcaaaa cactacgaac
cgggtggcaa ataccatctg 151 tttggtaatg ctcgcggcag tgttaaaaat
cgggtttgcg ccgtccaaac 201 atttgatgca actgcggtcg gccccatact
gcctattaca cacgaacgga 251 caggatttga aggtgttatc ggctatgaaa
cccatttttc aggacacgga 301 cacgaagtac acagtccgtt cgataatcat
gattcaaaaa gcacttctga 351 tttcagcggc ggcgtagacg gcggttttac
cgtttaccaa cttcatcgga 401 cagggtcgga aatacatccc gcagacggat
atgacgggcc tcaaggcggc 451 ggttatccgg aaccacaagg ggcaagggat
atatacagct accatatcaa 501 aggaacttca accaaaacaa agataaacac
tgttccgcaa gccccttttt 551 cagaccgctg gctaaaagaa aatgccggtg
ccgcttccgg ttttctcagc 601 cgtgcggatg aagcaggaaa actgatatgg
gaaaacgacc ccgataaaaa 651 ttggcgggct aaccgtatgg atgatattcg
cggcatcgtc caaggtgcgg 701 ttaatccttt tttaacgggt tttcaagggg
tagggattgg ggcaattaca 751 gacagtgcgg taagcccggt cacagataca
gccgctcagc agactctaca 801 aggtattaat gatttaggaa atttaagtcc
ggaagcacaa cttgccgccg 851 cgagcctatt acaggacagt gcctttgcgg
taaaagacgg catcaattcc 901 gccagacaat gggctgatgc ccatccgaat
ataacagcaa cagcccaaac 951 tgcccttgcc gtagcagagg ccgcaggtac
ggtttggcgc ggtaaaaaag 1001 tagaacttaa cccgaccaaa tgggattggg
ttaaaaatac cggctataaa 1051 aaacctgctg cccgccatat gcagactgta
gatggggaga tggcaggggg 1101 gaatagaccg cctaaatcta taacgtcgga
aggaaaagct aatgctgcaa 1151 cctatcctaa gttggttaat cagctaaatg
agcaaaactt aaataacatt 1201 gcggctcaag atccaagatt gagtctagct
attcatgagg gtaaaaaaaa 1251 ttttccaata ggaactgcaa cttatgaaga
ggcagataga ctaggtaaaa 1301 tttgggttgg tgagggtgca agacaaacta
gtggaggcgg atggttaagt 1351 agagatggca ctcgacaata tcggccacca
acagaaaaaa aatcacaatt 1401 tgcaactaca ggtattcaag caaattttga
aacttatact attgattcaa 1451 atgaaaaaag aaataaaatt aaaaatggac
atttaaatat taggtaa
This corresponds to the amino acid sequence <SEQ ID 888; ORF
238.ng>:
TABLE-US-01136 g238.pep 1 MNLPIQKFMM LLAAAISMLH IPISHANGLD
ARLRDDMQAK HYEPGGKYHL 51 FGNARGSVKN RVCAVQTFDA TAVGPILPIT
HERTGFEGVI GYETHFSGHG 101 HEVHSPFDNH DSKSTSDFSG GVDGGFTVYQ
LHRTGSEIHP ADGYDGPQGG 151 GYPEPQGARD IYSYHIKGTS TKTKINTVPQ
APFSDRWLKE NAGAASGFLS 201 RADEAGKLIW ENDPDKNWRA NRMDDIRGIV
QGAVNPFLTG FQGVGIGAIT 251 DSAVSPVTDT AAQQTLQGIN DLGNLSPEAQ
LAAASLLQDS AFAVKDGINS 301 ARQWADAHPN ITATAQTALA VAEAAGTVWR
GKKVELNPTK WDWVKNTGYK 351 KPAARHMQTV DGEMAGGNRP PKSITSEGKA
NAATYPKLVN QLNEQNLNNI 401 AAQDPRLSLA IHEGKKNFPI GTATYEEADR
LGKIWVGEGA RQTSGGGWLS 451 RDGTRQYRPP TEKKSQFATT GIQANFETYT
IDSNEKRNKI KNGHLNIR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 889>:
TABLE-US-01137 m238.seq 1 ATGAATTTGC CTATTCAAAA ATTCATGATG
CTGTTTGCAG CAGCAATATC 51 GTTGCTGCAA ATCCCCATTA GTCATGCGAA
CGGTTTGGAT GCCCGTTTGC 101 GCGATGATAT GCAGGCAAAA CAcTACGAAC
CGGGTGGTAA ATACCATCTG 151 TTTGGTAATG CTCGCGGCAG TGTTAAAAAG
CGGGTTTACG CCGTCCAGAC 201 ATTTGATGCA ACTGCGGTCA GTCCTGTACT
GCCTATTACA CACGAACGGA 251 CAGGGTTTGA AGGTGTTATC GGTTATGAAA
CCCATTTTTC AGGGCACGGA 301 CATGAAGTAC ACAGTCCGTT CGATCATCAT
GATTCAAAAA GCACTTCTGA 351 TTTCAGCGGC GGTGTAGACG GCGGTTTTAC
TGTTTACCAA CTTCATCGAA 401 CAGGGTCGGA AATCCATCCG GAGGATGGAT
ATGACGGGCC GCAAGGCAGC 451 GATTATCCGC CCCCCGGAGG AGCAAGGGAT
ATATACAGCT ATTATGTCAA 501 AGGAACTTCA ACAAAAACAA AGACTAATAT
TGTCCCTCAA GCCCCATTTT 551 CAGACCGTTG GCTAAAAGAA AATGCCGGTG
CCGCCTCTGG TTTTTTCAGC 601 CGTGCGGATG AAGCAGGAAA ACTGATATGG
GAAAGCGACC CCAATAAAAA 651 TTGGTGGGCT AACCGTATGG ATGATGTTCG
CGGCATCGTC CAAGGTGCGG 701 TTAATCCTTT TTTAATGGGT TTTCAAGGAG
TAGGGATTGG GGCAATTACA 751 GACAGTGCAG TAAGCCCGGT CACAGATACA
GCCGCGCAGC AGACTCTACA 801 AGGTATTAAT GATTTAGGAA AATTAAGTCC
GGAAGCACAA CTTGCTGCCG 851 CGAGCCTATT ACAGGACAGT GCTTTTGCGG
TAAAAGACGG TATCAACTCT 901 GCCAAACAAT GGGCTGATGC CCATCCAAAT
ATAACAGCTA CTGCCCAAAC 951 TGCCCTTTCC GCAGCAGAGG CCGCAGGTAC
GGTTTGGAGA GGTAAAAAAG 1001 TAGAACTTAA CCCGACTAAA TGGGATTGGG
TTAAAAATAC CGGTTATAAA 1051 AAACCTGCTG CCCGCCATAT GCAGACTTTA
GATGGGGAGA TGGCAGGTGG 1101 GAATAAACCT ATTAAATCTT TACCAAACAG
TGCCGCTGAA AAAAGAAAAC 1151 AAAATTTTGA GAAGTTTAAT AGTAACTGGA
GTTCAGCAAG TTTTGATTCA 1201 GTGCACAAAA CACTAACTCC CAATGCACCT
GGTATTTTAA GTCCTGATAA 1251 AGTTAAAACT CGATACACTA GTTTAGATGG
AAAAATTACA ATTATAAAAG 1301 ATAACGAAAA CAACTATTTT AGAATCCATG
ATAATTCACG AAAACAGTAT 1351 CTTGATTCAA ATGGTAATGC TGTGAAAACC
GGTAATTTAC AAGGTAAGCA 1401 AGCAAAAGAT TATTTACAAC AACAAACTCA
TATCAGGAAC TTAGACAAAT 1451 GA
This corresponds to the amino acid sequence <SEQ ID 890; ORF
238>:
TABLE-US-01138 m238.pep 1 MNLPIQKFMM LFAAAISLLQ IPISHANGLD
ARLRDDMQAK HYEPGGKYHL 51 FGNARGSVKK RVYAVQTFDA TAVSPVLPIT
HERTGFEGVI GYETHFSGHG 101 HEVHSPFDHH DSKSTSDFSG GVDGGFTVYQ
LHRTGSEIHP EDGYDGPQGS 151 DYPPPGGARD IYSYYVKGTS TKTKTNIVPQ
APFSDRWLKE NAGAASGFFS 201 RADEAGKLIW ESDPNKNWWA NRMDDVRGIV
QGAVNPFLMG FQGVGIGAIT 251 DSAVSPVTDT AAQQTLQGIN DLGKLSPEAQ
LAAASLLQDS AFAVKDGINS 301 AKQWADAHPN ITATAQTALS AAEAAGTVWR
GKKVELNPTK WDWVKNTGYK 351 KPAARHMQTL DGEMAGGNKP IKSLPNSAAE
KRKQNFEKFN SNWSSASFDS 401 VHKTLTPNAP GILSPDKVKT RYTSLDGKIT
IIKDNENNYF RIHDNSRKQY 451 LDSNGNAVKT GNLQGKQAKD YLQQQTHIRN LDK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 238
shows 86.0% identity over a 401 aa overlap with a predicted ORF
(ORF 238.ng) from N. gonorrhoeae:
TABLE-US-01139 m238/g238 10 20 30 40 50 60 m238.pep
MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEPGGKYHLFGNARGSVKK
|||||||||||:|||||:|:|||||||||||||||||||||||||||||||||||||||: g238
MNLPIQKFMMLLAAAISMLHIPISHANGLDARLRDDMQAKHYEPGGKYHLFGNARGSVKN 10 20
30 40 50 60 70 80 90 100 110 120 m238.pep
RVYAVQTFDATAVSPVLPITHERTGFEGVIGYETHFSGHGHEVHSPFDHHDSKSTSDFSG ||
||||||||||:|:||||||||||||||||||||||||||||||||:||||||||||| g238
RVCAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHEVHSPFDNHDSKSTSDFSG 70 80
90 100 110 120 130 140 150 160 170 180 m238.pep
GVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYYVKGTSTKTKTNIVPQ
|||||||||||||||||||| ||||||||: || | ||||||||::|||||||| | ||| g238
GVDGGFTVYQLHRTGSEIHPADGYDGPQGGGYPEPQGARDIYSYHIKGTSTKTKINTVPQ 130
140 150 160 170 180 190 200 210 220 230 240 m238.pep
APFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNWWANRMDDVRGIVQGAVNPFLMG
||||||||||||||||||:||||||||||||:||:||| ||||||:|||||||||||| | g238
APFSDRWLKENAGAASGFLSRADEAGKLIWENDPDKNWRANRMDDIRGIVQGAVNPFLTG 190
200 210 220 230 240 250 260 270 280 290 300 m238.pep
FQGVGIGAITDSAVSPVTDTAAQQTLQGINDLGKLSPEAQLAAASLLQDSAFAVKDGINS
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| g238
FQGVGIGAITDSAVSPVTDTAAQQTLQGINDLGNLSPEAQLAAASLLQDSAFAVKDGINS 250
260 270 280 290 300 310 320 330 340 350 360 m238.pep
AKQWADAHPNITATAQTALSAAEAAGTVWRGKKVELNPTKWDWVKNTGYKKPAARHMQTL
|:|||||||||||||||||::||||||||||||||||||||||||||||||||||||||: g238
ARQWADAHPNITATAQTALAVAEAAGTVWRGKKVELNPTKWDWVKNTGYKKPAARHMQTV 310
320 330 340 350 360 370 380 390 400 410 420 m238.pep
DGEMAGGNKPIKSLPNSAAEKRKQNFEKFNSNWSSASFDSVHKTLTPNAPGILSPDKVKT
||||||||:| ||: :| :: :: |: :: : ::::: g238
DGEMAGGNRPPKSI-TSEGKANAATYPKLVNQLNEQNLNNIAAQDPRLSLAIHEGKKNFP 370
380 390 400 410 430 440 450 460 470 480 m238.pep
RYTSLDGKITIIKDNENNYFRIHDNSRKQYLDSNGNAVKTGNLQGKQAKDYLQQQTHIRN g238
IGTATYEEADRLGKIWVGEGARQTSGGGWLSRDGTRQYRPPTEKKSQFATTGIQANFETY 420
430 440 450 460 470
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 891>:
TABLE-US-01140 a238.seq (partial) 1 ATGAATTTGC CTATTCAAAA
ATTCATGATG CTGTTTGCAG CAGCAATATC 51 GTTGCTGCAA ATCCCCATTA
GTCATGCGAA CGGTTTGGAT GCCCGTTTGC 101 GCGATGATAT GCAGGCAAAA
CACTACGAAC CGGGTGGTAA ATACCATCTG 151 TTTGGTAATG CTCGCGGCAG
TGTTAAAAAT CGGGTTTACG CCGTCCAAAC 201 ATTTGATGCA ACTGCGGTCG
GCCCCATACT GCCTATTACA CACGAACGGA 251 CAGGATTTGA AGGCATTATC
GGTTATGAAA CCCATTTTTC AGGACATGGA 301 CATGAAGTAC ACAGTCCGTT
CGATAATCAT GATTCAAAAA GCACTTCTGA 351 TTTCAGCGGC GGCGTAGACG
GTGGTTTTAC CGTTTACCAA CTTCATCGGA 401 CAGGGTCGGA AATCCATCCG
GAGGATGGAT ATGACGGGCC GCAAGGCAGC 451 GATTATCCGC CCCCCGGAGG
AGCAAGGGAT ATATACAGCT ACTATGTCAA 501 AGGAACTTCA ACAAAAACAA
AGAGTAATAT TGTTCCCCGA GCCCCATTTT 551 CAGACCGCTG GCTAAAAGAA
AATGCCGGTG CCGCCTCTGG TTTTTTCAGC 601 CGTGCTGATG AAGCAGGAAA
ACTGATATGG GAAAGCGACC CCAATAAAAA 651 TTGGTGGGCT AACCGTATGG
ATGATATTCG CGGCATCGTC CAAGGTGCGG 701 TTAATCCTTT TTTAATGGGT
TTTCAAGGAG TAGGGATTGG GGCAATTACA 751 GACAGTGCAG TAAGCCCGGT
CACAGATACA GCCGCGCAGC AGACTCTACA 801 AGGTATTAAT CATTTAGGAA
ATTTAAGTCC CGAAGCACAA CTTGCGGCTG 851 CAACCGCATT ACAAGACAGT
GCTTTTGCGG TAAAAGACGG TATCAATTCC 901 GCCAGACAAT GGGCTGATGC
CCATCCGAAT ATAACTGCAA CAGCCCAAAC 951 TGCCCTTGCC GTAGCAGAGG
CCGCAACTAC GGTTTGGGGC GGTAAAAAAG 1001 TAGAACTTAA CCCGACCAAA
TGGGATTGGG TTAAAAATAC CGGCTATAAA 1051 ACACCTGCTG TTCGCACCAT
GCATACTTTG GATGGGGAAA TGGCCGGTGG 1101 GAATAGACCG CCTAAATCTA
TAACGTCCAA CAGCAAAGCA GATGCTTCCA 1151 CACAA
This corresponds to the amino acid sequence <SEQ ID 892; ORF
238.a>:
TABLE-US-01141 a238.pep (partial) 1 MNLPIQKFMM LFAAAISLLQ
IPISHANGLD ARLRDDMQAK HYEPGGKYHL 51 FGNARGSVKN RVYAVQTFDA
TAVGPILPIT HERTGFEGII GYETHFSGHG 101 HEVHSPFDNH DSKSTSDFSG
GVDGGFTVYQ LHRTGSEIHP EDGYDGPQGS 151 DYPPPGGARD IYSYYVKGTS
TKTKSNIVPR APFSDRWLKE NAGAASGFFS 201 RADEAGKLIW ESDPNKNWWA
NRMDDIRGIV QGAVNPFLMG FQGVGIGAIT 251 DSAVSPVTDT AAQQTLQGIN
HLGNLSPEAQ LAAATALQDS AFAVKDGINS 301 ARQWADAHPN ITATAQTALA
VAEAATTVWG GKKVELNPTK WDWVKNTGYK 351 TPAVRTMHTL DGEMAGGNRP
PKSITSNSKA DASTQ m238/a238 91.9% identity in 385 aa overlap 10 20
30 40 50 60 m238.pep
MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEPGGKYHLFGNARGSVKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a238
MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEPGGKYHLFGNARGSVKN 10 20
30 40 50 60 70 80 90 100 110 120 m238.pep
RVYAVQTFDATAVSPVLPITHERTGFEGVIGYETHFSGHGHEVHSPFDHHDSKSTSDFSG
|||||||||||||:|:||||||||||||:|||||||||||||||||||:||||||||||| a238
RVYAVQTFDATAVGPILPITHERTGFEGIIGYETHFSGHGHEVHSPFDNHDSKSTSDFSG 70 80
90 100 110 120 130 140 150 160 170 180 m238.pep
GVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYYVKGTSTKTKTNIVPQ
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||: a238
GVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYYVKGTSTKTKSNIVPR 130
140 150 160 170 180 190 200 210 220 230 240 m238.pep
APFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNWWANRMDDVRGIVQGAVNPFLMG
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| a238
APFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNWWANRMDDIRGIVQGAVNPFLMG 190
200 210 220 230 240 250 260 270 280 290 300 m238.pep
FQGVGIGAITDSAVSPVTDTAAQQTLQGINDLGKLSPEAQLAAASLLQDSAFAVKDGINS
|||||||||||||||||||||||||||||| |:||||||||||: |||||||||||||| a238
FQGVGIGAITDSAVSPVTDTAAQQTLQGINHLGNLSPEAQLAAATALQDSAFAVKDGINS 250
260 270 280 290 300 310 320 330 340 350 360 m238.pep
AKQWADAHPNITATAQTALSAAEAAGTVWRGKKVELNPTKWDWVKNTGYKKPAARHMQTL
|:|||||||||||||||||::|||| ||| |||||||||| |||||||||| ||:| |:|| a238
ARQWADAHPNITATAQTALAVAEAATTVWGGKKVELNPTKWDWVKNTGYKTPAVRTMHTL 310
320 330 340 350 360 370 380 390 400 410 419 m238.pep
DGEMAGGNKPIKSLP-NSAAEKRKQNFEKFNSNWSSASFDSVHKTLTPNAPGILSPDKVK
||||||||:| ||: || |: | a238 DGEMAGGNRPPKSITSNSKADASTQ
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 893>:
TABLE-US-01142 g239.seq 1 atgttccacc ataaaggtat tgcccgaaac
cggcggatgg aggttttgtt 51 tttctgccgc cgccctgatc gcttcgtgat
tcgccaaacg cgcctgttgc 101 agcctcattt gcgcataatc ctgctccaag
gcgatttcct gttttttcgc 151 cttgtccaaa gctgtgaagt tgagcctgta
ctggttttgc tgcatcacaa 201 cggaaaaagc ggaaacgcac accgcaagca
gcagaaagaa attcgatttg 251 ttcattgccg ttcagacgtt tttctctgtt
attattccgg tatcggaccg 301 gcagtccgct ccgccacacg caaaactgcg
ctcctcgccc tcgggttggc 351 ggcaatttcc gcttcacccg gctttaatgc
cctgcccacg attttcaggg 401 gcggatcggg caaatccgct tctctgaccg
ccgcccagct cggcaggggc 451 tcgtgttgcg aatatttttt gacaaactgc
ttcacaatgc ggtcttccaa 501 cgaatggaaa gcaatgaccg ccaaacgccc
gccctctttc agacggcaca 551 tgacctgcgg caataccgcc cctacttctt
caagctcgcg gttaataaag 601 atgcggattg cctggaaggt gcgcgtcgca
ggatcctgcc cccgctcgcg 651 agtacggacg ttttgtgcca cgatctgcgc
cagcttgcgg gttgtatcga 701 ttggactttc cgcccgttgc gcgacaatgg
cgcgcacaat ctggcggcta 751 aaccgctctt caccataa
This corresponds to the amino acid sequence <SEQ ID 894; ORF
239.ng>:
TABLE-US-01143 g239.pep 1 MFHHKGIARN RRMEVLFFCR RPDRFVIRQT
RLLQPHLRII LLQGDFLFFR 51 LVQSCEVEPV LVLLHHNGKS GNAHRKQQKE
IRFVHCRSDV FLCYYSGIGP 101 AVRSATRKTA LLALGLAAIS ASPGFNALPT
IFRGGSGKSA SLTAAQLGRG 151 SCCEYFLTNC FTMRSSNEWK AMTAKRPPSF
RRHMTCGNTA PTSSSSRLIK 201 MRIAWKVRVA GSCPRSRVRT FCATICASLR
VVSIGLSARC ATMARTIWRL 251 NRSSP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 895>:
TABLE-US-01144 m239.seq 1 ATGCTCCACC ATAAAGGTmy kGCCCGAAAC
CGGCkGATGG AGGTTTTGTT 51 TTTCTGCCGC CGCCCTGATC GCTTCGTGGT
TCGCCAAACG CGCCTGTTGC 101 AGCCTCATTT GCGCATAATC CTGCTCCAAG
GCGATTTCCT GTTTTTTCGC 151 CTTATCCAAA GCTGTGAAAT TGAGCCTGTA
CTGGTTTTGC TGCATCACAA 201 CGGAAAAAGC GGAAACGCAC ACCGCAAGCA
GCAGAAGGAA ATTCAATTTG 251 TTCATTGCCA TTCAGACGTT TTTCTCTGTG
ATTGTTCCGG TATCGGACCG 301 GCAGTCCGCT CCGCCACACG CAAAACCGCA
CTTCTCGCCC TCGGATTGGC 351 GGCAATTTCC GCCTCACCCG GCTTTAATGC
CCTGCCCACG ATTTTCAGGG 401 GCAGCTCGGG CAAATCCGCT TCCCTGaCCG
CCGCCCAGCG CGGCAGGGGC 451 GCGTGTTGCG AATATTTTTT GACAAACTGC
TTCACAATGC GATCTTCCAA 501 CGAATGGAAA GCAATGACCG CCAAACGTCC
GCCCTCTTTC AGACGACACA 551 TGACCTGCGG CAATACTGCC CCTACTTCTT
CAAGCTCGCG GTTAATAAAG 601 ATGCGGACCG CCTGGAAGGT GCGCGTCGCA
GGATCCTGCC CCCGCTCGCG 651 AGTACGGACG TTTTGTGCCA CGATCTGCGC
CAGCTTGCGG GTTGTATCGA 701 TTGGACTTTC CGCCCGTTGC GCAACAATGG
CGCGCGCAAT cCGGCGGCTa 751 AACCGCTCTT cACCATAA
This corresponds to the amino acid sequence <SEQ ID 896; ORF
239>:
TABLE-US-01145 m239.pep 1 MLHHKGXARN RXMEVLFFCR RPDRFVVRQT
RLLQPHLRII LLQGDFLFFR 51 LIQSCEIEPV LVLLHHNGKS GNAHRKQQKE
IQFVHCHSDV FLCDCSGIGP 101 AVRSATRKTA LLALGLAAIS ASPGFNALPT
IFRGSSGKSA SLTAAQRGRG 151 ACCEYFLTNC FTMRSSNEWK AMTAKRPPSF
RRHMTCGNTA PTSSSSRLIK 201 MRTAWKVRVA GSCPRSRVRT FCATICASLR
VVSIGLSARC ATMARAIRRL 251 NRSSP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 239
shows 93.7% identity over a 255 aa overlap with a predicted ORF
(ORF 239.ng) from N. gonorrhoeae:
TABLE-US-01146 m239/g239 10 20 30 40 50 60 m239.pep
MLHHKGXARNRXMEVLFFCRRPDRFVVRQTRLLQPHLRIILLQGDFLFFRLIQSCEIEPV |:||||
|||| ||||||||||||||:||||||||||||||||||||||||:||||:||| g239
MFHHKGIARNRRMEVLFFCRRPDRFVIRQTRLLQPHLRIILLQGDFLFFRLVQSCEVEPV 10 20
30 40 50 60 70 80 90 100 110 120 m239.pep
LVLLHHNGKSGNAHRKQQKEIQFVHCHSDVFLCDCSGIGPAVRSATRKTALLALGLAAIS
|||||||||||||||||||||:||||:|||||| ||||||||||||||||||||||||| g239
LVLLHHNGKSGNAHRKQQKEIRFVHCRSDVFLCYYSGIGPAVRSATRKTALLALGLAAIS 70 80
90 100 110 120 130 140 150 160 170 180 m239.pep
ASPGFNALPTIFRGSSGKSASLTAAQRGRGACCEYFLTNCFTMRSSNEWKAMTAKRPPSF
||||||||||||||:||||||||||| |||:||||||||||||||||||||||||||||| g239
ASPGFNALPTIFRGGSGKSASLTAAQLGRGSCCEYFLTNCFTMRSSNEWKAMTAKRPPSF 130
140 150 160 170 180 190 200 210 220 230 240 m239.pep
RRHMTCGNTAPTSSSSRLIKMRTAWKVRVAGSCPRSRVRTFCATICASLRVVSIGLSARC
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| g239
RRHMTCGNTAPTSSSSRLIKMRIAWKVRVAGSCPRSRVRTFCATICASLRVVSIGLSARC 190
200 210 220 230 240 250 m239.pep ATMARAIRRLNRSSPX |||||:| ||||||||
g239 ATMARTIWRLNRSSPX 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 897>:
TABLE-US-01147 a239.seq 1 ATGCTCCACC ATAAAGGTAT TGCCCGAAAC
CGGCGGATGG AGGTTTTGTT 51 TTTCTGCCGC CGCCCTGATC GCTTCGTGGT
TCGCCAAACG CGCCTGTTGC 101 AGCCTCATTT GCGCATAATC CTGCTCCAAG
GCGATTTCCT GTTTTTTCGC 151 CTTATCCAAA GCTGTGAAGT TGAGCCTGTA
CTGGTTTTGC TGCATCACAA 201 CGGAAAAAGC GGAAACGCAC ACCGCAAGCA
GCAGAAGGAA ATTCAATTTG 251 TTCATTGCCA TTCAGACGTT TTTCTCTGTG
ATTGTTCCGG TATCGGACCG 301 GCAGTCCGCT CCGCCACACG CAAAACCGCA
CTTCTCGCCC TCGGATTGGC 351 GGCAATTTCC GCCTCACCCG GCTTTAATGC
CCTGCCCGCG ATTTTCAGGG 401 GCGGCTCGGG CAAATCCGCT TCCCTGACCG
CCGCCCAGCG CGGCAGGGGC 451 GCGTGTTGCG AATATTTTTT GACAAACTGC
TTCACAATGC GGTCTTCCAA 501 CGAATGGAAA GCAATGACCG CCAAACGTCC
GCCCTCTTTC AGACGACACA 551 TGACCTGCGG CAATACTGCC CCTACTTCTT
CAAGCTCGCG GTTAATAAAG 601 ATGCGGATTG CCTGGAAGGT GCGCGTCGCA
GGATCCTGCC CCCGCTCGCG 651 AGTACGGACG TTTTGTGCCA CGATCTGCGC
CAGCTTGCGG GTTGTATCGA 701 TTGGACTTTC CGCCCGTTGC GCAACAATGG
CGCGCGCAAT CTGGCGGCTA 751 AACCGCTCTT CACCATAA
This corresponds to the amino acid sequence <SEQ ID 898; ORF
239.a>:
TABLE-US-01148 a239.pep 1 MLHHKGIARN RRMEVLFFCR RPDRFVVRQT
RLLQPHLRII LLQGDFLFFR 51 LIQSCEVEPV LVLLHHNGKS GNAHRKQQKE
IQFVHCHSDV FLCDCSGIGP 101 AVRSATRKTA LLALGLAAIS ASPGFNALPA
IFRGGSGKSA SLTAAQRGRG 151 ACCEYFLTNC FTMRSSNEWK AMTAKRPPSF
RRHMTCGNTA PTSSSSRLIK 201 MRIAWKVRVA GSCPRSRVRT FCATICASLR
VVSIGLSARC ATMARAIWRL 251 NRSSP* m239/a239 97.3% identity in 255 aa
overlap 10 20 30 40 50 60 m239.pep
MLHHKGXARNRXMEVLFFCRRPDRFVVRQTRLLQPHLRIILLQGDFLFFRLIQSCEIEPV ||||||
|||| ||||||||||||||||||||||||||||||||||||||||||||:||| a239
MLHHKGIARNRRMEVLFFCRRPDRFVVRQTRLLQPHLRIILLQGDFLFFRLIQSCEVEPV 10 20
30 40 50 60 70 80 90 100 110 120 m239.pep
LVLLHHNGKSGNAHRKQQKEIQFVHCHSDVFLCDCSGIGPAVRSATRKTALLALGLAAIS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a239
LVLLHHNGKSGNAHRKQQKEIQFVHCHSDVFLCDCSGIGPAVRSATRKTALLALGLAAIS 70 80
90 100 110 120 130 140 150 160 170 180 m239.pep
ASPGFNALPTIFRGSSGKSASLTAAQRGRGACCEYFLTNCFTMRSSNEWKAMTAKRPPSF
|||||||||:||||:||||||||||||||||||||||||||||||||||||||||||||| a239
ASPGFNALPAIFRGGSGKSASLTAAQRGRGACCEYFLTNCFTMRSSNEWKAMTAKRPPSF 130
140 150 160 170 180 190 200 210 220 230 240 m239.pep
RRHMTCGNTAPTSSSSRLIKMRTAWKVRVAGSCPRSRVRTFCATICASLRVVSIGLSARC
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| a239
RRHMTCGNTAPTSSSSRLIKMRIAWKVRVAGSCPRSRVRTFCATICASLRVVSIGLSARC 190
200 210 220 230 240 250 m239.pep ATMARAIRRLNRSSPX ||||||| ||||||||
a239 ATMARAIWRLNRSSPX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 899>:
TABLE-US-01149 g240.seq 1 atgatagaag tcatacattt cttcggcgcc
gaaacgcgca gacagtttgc 51 ttgtgccgac gttggacgat ttctgcataa
tgccgcgcac atccaaagag 101 gggtaaacat gggtatcatc gcgcacggga
gacggtccga ttttataagg 151 ctgcgtattc agccgttcgt tcaaatcggt
tttgcccgca tccaatgcct 201 tcgcaatcac gaacggtttg attgccgaac
caggttcgat catatcggtt 251 acggcacggt tgcgccgctg ttcgctgtct
gcccggccgg gtctgttggg 301 atcgtaggcg ggcgtattgg ccaaggcgag
gatttccccc gtgcgggcat 351 ccaaaaccac caccgttccg gcttttgcct
gatggtattc gaccgccttg 401 ttcaactctt cataggccaa ggtctgaatc
ctctgatcga gggaaaggat 451 gatgtctttg ccgttttgcg gtgctttatt
gcgcggggag tccaagctgt 501 ccacaatatt gccctgccgg tcccgcaaaa
caacttccgc gccgtcttcg 551 ccatacaggc tgtcttcaag cgaaagttcc
aaaccttcct gacctttgcc 601 gtcaatatcg gtaaatccga tgacgtgtgc
aaacaggttg cccatcgggt 651 aatggcgttt taa
This corresponds to the amino acid sequence <SEQ ID 900; ORF
240.ng>:
TABLE-US-01150 g240.pep 1 MIEVIHFFGA ETRRQFACAD VGRFLHNAAH
IQRGVNMGII AHGRRSDFIR 51 LRIQPFVQIG FARIQCLRNH ERFDCRTRFD
HIGYGTVAPL FAVCPAGSVG 101 IVGGRIGQGE DFPRAGIQNH HRSGFCLMVF
DRLVQLFIGQ GLNPLIEGKD 151 DVFAVLRCFI ARGVQAVHNI ALPVPQNNFR
AVFAIQAVFK RKFQTFLTFA 201 VNIGKSDDVC KQVAHRVMAF *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 901>:
TABLE-US-01151 m240.seq 1 ATGATAGAAG TCATACATTT CTTCGGCACC
GAAACGCGCA GACAGTTTGC 51 TTGTGCCGAC GTTGGACGAT TTCTGCATGA
TGCCGCGCAC ATCCAAAGAG 101 GGGTAAACAT GGGTATCGCG CACGGGAGAC
GGTCCGATTT TATAAGGCTG 151 CGTATTCAGC CGTTCGTTCA AATCGGTTTT
GCCCGCATCC AATGCCTTCG 201 CAATCACAAA CGGTTTGATT GCCGAACCGG
GTTCGATCAT ATCGGTTACG 251 GCACGGTTGC GCCGCTGTTC GCTGTCTGCC
CGGCCGGGCC TGTTGGGATC 301 GTAGGCGGGC GTATTGGCCA AGGCGAGGAT
TTCCCCCGTG CGGGCATCCA 351 ArACCACCAC CGTTCCGGCT TTTGCCTGAT
GGTATTCGAC CGCCTTGTTC 401 AACTCTTCAT AGGCCAAGGT CTGAATCCTC
TGATCGAGGG AAAGGATGAT 451 GTCTTTGCCG TTTTTCGGGG CTTTAkTGCG
CGGGGAGTCC AAGCTGTCCA 501 CAATATTGCC CTGCCGGTCC CGCAAAACGA
CTTCCGCGCC GTCTTCGCCA 551 TGCAAGCTGT CTTCAAGCGA AAGTTCCAAA
CCTTCCTGAC CTTTGCCGTC 601 AATATCGGTA AATCCGATGA CGTGTGCAAA
CAGGTTGCCC ATCGGGTAAT 651 GGCGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 902; ORF
240>:
TABLE-US-01152 m240.pep 1 MIEVIHFFGT ETRRQFACAD VGRFLHDAAH
IQRGVNMGIA HGRRSDFIRL 51 RIQPFVQIGF ARIQCLRNHK RFDCRTGFDH
IGYGTVAPLF AVCPAGPVGI 101 VGGRIGQGED FPRAGIQXHH RSGFCLMVFD
RLVQLFIGQG LNPLIEGKDD 151 VFAVFRGFXA RGVQAVHNIA LPVPQNDFRA
VFAMQAVFKR KFQTFLTFAV 201 NIGKSDDVCK QVAHRVMAF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 240
shows 94.5% identity over a 220 aa overlap with a predicted ORF
(ORF 240.ng) from N. gonorrhoeae:
TABLE-US-01153 m240/g240 10 20 30 40 50 59 m240.pep
MIEVIHFFGTETRRQFACADVGRFLHDAAHIQRGVNMGI-AHGRRSDFIRLRIQPFVQIG
|||||||||:||||||||||||||||:|||||||||||| |||||||||||||||||||| g240
MIEVIHFFGAETRRQFACADVGRFLHNAAHIQRGVNMGIIAHGRRSDFIRLRIQPFVQIG 10 20
30 40 50 60 60 70 80 90 100 110 119 m240.pep
FARIQCLRNHKRFDCRTGFDHIGYGTVAPLFAVCPAGPVGIVGGRIGQGEDFPRAGIQXH
||||||||||:|||||| ||||||||||||||||||| |||||||||||||||||||| | g240
FARIQCLRNHERFDCRTRFDHIGYGTVAPLFAVCPAGSVGIVGGRIGQGEDFPRAGIQNH 70 80
90 100 110 120 120 130 140 150 160 170 179 m240.pep
HRSGFCLMVFDRLVQLFIGQGLNPLIEGKDDVFAVFRGFXARGVQAVHNIALPVPQNDFR
|||||||||||||||||||||||||||||||||||:| | |||||||||||||||||:|| g240
HRSGFCLMVFDRLVQLFIGQGLNPLIEGKDDVFAVLRCFIARGVQAVHNIALPVPQNNFR 130
140 150 160 170 180 180 190 200 210 220 m240.pep
AVFAMQAVFKRKFQTFLTFAVNIGKSDDVCKQVAHRVMAFX
||||:||||||||||||||||||||||||||||||||||| g240
AVFAIQAVFKRKFQTFLTFAVNIGKSDDVCKQVAHRVMAF 190 200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 903>:
TABLE-US-01154 a240.seq 1 ATGATAGAAG TCATACATTT CTTCGGCACC
GAAACGCGCA GACAGTTTGC 51 TTGTGCCGAC GTTGGACGAT TTCTGCATGA
TGCCGCGCAC ATCCAAAGAG 101 GGGTAAACAT GGGTATCGCG CACGGGAGAC
GGTCCGATTT TATAAGGCTG 151 CGTATTCAGC CGTTCGTTCA AATCGGTTTT
GCCCGCATCC AATGCCTTCG 201 CAATCACAAA CGGTTTGATT GCCGAACCGG
GTTCGATCAT ATCGGTTACG 251 GCACGGTTGC GCCGCTGTTC GCTGTCTGCC
CGGCCGGGCC TGTTGGGATC 301 GTAGGCGGGC GTATTGGCCA AGGCGAGGAT
TTCCCCCGTG CGGGCATCCA 351 AAACCACCAC CGTTCCGGCT TTTGCCTGAT
GGTATTCGAC CGCCTTGTTC 401 AACTCTTCAT AGGCCAAGGT CTGAATCCTC
TGATCGAGGG AAAGGATGAT 451 GTCTTTGCCG TTTTTCGGGG CTTTATTGCG
CGGGGAGTCC AAGCTGTCCA 501 CAATATTGCC CTGCCGGTCC CGCAAAACGA
CTTCCGCGCC GTCTTCGCCA 551 TGCAGGCTGT CTTCAAGCGA AAGTTCCAAA
CCTTCCTGAC CTTTGCCGTC 601 AATATCGGTA AATCCGATGA CGTGTGCAAA
CAGGTTGCCC ATCGGGTAAT 651 GGCGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 904; ORF
240.a>:
TABLE-US-01155 a240.pep 1 MIEVIHFFGT ETRRQFACAD VGRFLHDAAH
IQRGVNMGIA HGRRSDFIRL 51 RIQPFVQIGF ARIQCLRNHK RFDCRTGFDH
IGYGTVAPLF AVCPAGPVGI 101 VGGRIGQGED FPRAGIQNHH RSGFCLMVFD
RLVQLFIGQG LNPLIEGKDD 151 VFAVFRGFIA RGVQAVHNIA LPVPQNDFRA
VFAMQAVFKR KFQTFLTFAV 201 NIGKSDDVCK QVAHRVMAF* m240/a240 99.1%
identity in 219 aa overlap 10 20 30 40 50 60 m240.pep
MIEVIHFFGTETRRQFACADVGRFLHDAAHIQRGVNMGIAHGRRSDFIRLRIQPFVQIGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a240
MIEVIHFFGTETRRQFACADVGRFLHDAAHIQRGVNMGIAHGRRSDFIRLRIQPFVQIGF 10 20
30 40 50 60 70 80 90 100 110 120 m240.pep
ARIQCLRNHKRFDCRTGFDHIGYGTVAPLFAVCPAGPVGIVGGRIGQGEDFPRAGIQXHH
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || a240
ARIQCLRNHKRFDCRTGFDHIGYGTVAPLFAVCPAGPVGIVGGRIGQGEDFPRAGIQNHH 70 80
90 100 110 120 130 140 150 160 170 180 m240.pep
RSGFCLMVFDRLVQLFIGQGLNPLIEGKDDVFAVFRGFXARGVQAVHNIALPVPQNDFRA
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| a240
RSGFCLMVFDRLVQLFIGQGLNPLIEGKDDVFAVFRGFIARGVQAVHNIALPVPQNDFRA 130
140 150 160 170 180 190 200 210 220 m240.pep
VFAMQAVFKRKFQTFLTFAVNIGKSDDVCKQVAHRVMAFX
|||||||||||||||||||||||||||||||||||||||| a240
VFAMQAVFKRKFQTFLTFAVNIGKSDDVCKQVAHRVMAFX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 905>:
TABLE-US-01156 g241.seq 1 ATGATAGAAG TCATACATTT CTTCGGCACC
GAAACGCGCA GACAGTTTGC 51 TTGTGCCGAC GTTGGACGAT TTCTGCATGA
TGCCGCGCAC ATCCAAAGAG 101 GGGTAAACAT GGGTATCGCG CACGGGAGAC
GGTCCGATTT TATAAGGCTG 151 CGTATTCAGC CGTTCGTTCA AATCGGTTTT
GCCCGCATCC AATGCCTTCG 201 CAATCACAAA CGGTTTGATT GCCGAACCGG
GTTCGATCAT ATCGGTTACG 251 GCACGGTTGC GCCGCTGTTC GCTGTCTGCC
CGGCCGGGCC TGTTGGGATC 301 GTAGGCGGGC GTATTGGCCA AGGCGAGGAT
TTCCCCCGTG CGGGCATCCA 351 ArACCACCAC CGTTCCGGCT TTTGCCTGAT
GGTATTCGAC CGCCTTGTTC 401 AACTCTTCAT AGGCCAAGGT CTGAATCCTC
TGATCGAGGG AAAGGATGAT 451 GTCTTTGCCG TTTTTCGGGG CTTTAkTGCG
CGGGGAGTCC AAGCTGTCCA 501 CAATATTGCC CTGCCGGTCC CGCAAAACGA
CTTCCGCGCC GTCTTCGCCA 551 TGCAAGCTGT CTTCAAGCGA AAGTTCCAAA
CCTTCCTGAC CTTTGCCGTC 601 AATATCGGTA AATCCGATGA CGTGTGCAAA
CAGGTTGCCC ATCGGGTAAT 651 GGCGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 906; ORF
241.ng>:
TABLE-US-01157 g241.pep 1 MPTRPTRAAN PPTPTTWLQT AYCPRPPYRP
PSVQTHTPHE PASSTCAAKS 51 ANRRENSHNA QPTYLLHPSN KMPSETEQTL
FRRHQIPPSC RQSVVVMTVR 101 TVDMTVCDFL IGCIAHAFNR SFKADFHACQ
RMVAVHHRLA VGNIGYTIDD 151 NIAGFRIVRF KHHTDLDFNR ERARIFNTDQ
LRIMLTERIV GRKRHFDRIA 201 GILTVQRLFH QRENAVVTAV QIRNRFFGFI
QKLIVGIIHL IMQRNHGIFC 251 NSHICPFRNS RLITGAF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 907>:
TABLE-US-01158 m241.seq (partial) 1 ..CGGCAATCAG TGGTGGTGAT
GACCGTGCGG GCCGTGGACA TGACCGTGTG 51 CGATTTCCTC ATCGGATGCA
TCGCGCACGC TTTCAACTGT AGCCTTAAAG 101 CGGATTTTCA TGCCTGCCAA
AGGATGGTTG CCGTCCACCA CCGCCTTGCC 151 GTCGGCAACA TCGGTTACAC
GATAGACGAC AACATCGCCG GTTTCAGGAT 201 CGTCGGCTTC AAACATCATG
CCGACTTCGA CTTCAACAGG GAACACGCCC 251 GCATCTTCGA TACGGACCAA
CTCCGGATCC TGCTCGCCGA ACGCATCGTC 301 GGGCGACAGC GCCACATCGA
CCGTATCGCC GGCATCCTTA CCGTGCAACG 351 CCTCTTCCAC CAAAGGGAAA
ATGCCGTCGT AACCGCCGTG CAGATACGCA 401 ATCGGTTCTT CGGTTTTGTC
CAAAAGCTGA TTGTTGGCAT CATACATCTC 451 ATAATGCAGC GAAACCACGG
AATTTTTCAC GATAGCCATA TTTGTCCTTT 501 CAGGAACAGC AGATTAATTA
CAGGCGCATT CTAA
This corresponds to the amino acid sequence <SEQ ID 908; ORF
241>:
TABLE-US-01159 m241.pep (partial) 1 ..RQSVVVMTVR AVDMTVCDFL
IGCIAHAFNC SLKADFHACQ RMVAVHHRLA 51 VGNIGYTIDD NIAGFRIVGF
KHHADFDFNR EHARIFDTDQ LRILLAERIV 101 GRQRHIDRIA GILTVQRLFH
QRENAVVTAV QIRNRFFGFV QKLIVGIIHL 151 IMQRNHGIFH DSHICPFRNS
RLITGAF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 241
shows 91.5% identity over a 177 aa overlap with a predicted ORF
(ORF 241.ng) from N. gonorrhoeae:
TABLE-US-01160 m241/g241 10 20 30 m241.pep
RQSVVVMTVRAVDMTVCDFLIGCIAHAFNC ||||||||||:|||||||||||||||||| g241
QPTYLLHPSNKMPSETEQTLFRRHQIPPSCRQSVVVMTVRTVDMTVCDFLIGCIAHAFNR 70 80
90 100 110 120 40 50 60 70 80 90 m241.pep
SLKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFDTDQ
|:|||||||||||||||||||||||||||||||||||| ||||:|:|||||:||||:||| g241
SFKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVRFKHHTDLDFNRERARIFNTDQ 130
140 150 160 170 180 100 110 120 130 140 150 m241.pep
LRILLAERIVGRQRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL
|||:|:||||||:||:|||||||||||||||||||||||||||||||||:|||||||||| g241
LRIMLTERIVGRKRHFDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFIQKLIVGIIHL 190
200 210 220 230 240 160 170 m241.pep IMQRNHGIFHDSHICPFRNSRLITGAFX
||||||||| :||||||||||||||||| g241 IMQRNHGIFCNSHICPFRNSRLITGAFX 250
260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 909>:
TABLE-US-01161 a241.seq 1 ATGCCAACAC GTCCAACTCG CGCCGCAAAG
CATCCAACCC CGCCAACCTG 51 GCTTCAGACG GCATACTGCC CTCGTCCGCC
ATATCGTCCG CCGTCCGTGC 101 AAACGCATAC ACCGCATGAA CCGGCTTCCT
CAACCTGCGC GGCAAAATCA 151 GCGAACCGAC GGGAAAATTT TCATAATGCC
CAACCGACAT ACCTTCTCCA 201 TCCATCAAAC AAAATGCCGT CTGAAATGGA
ACAAACCCTT TTCAGACGGC 251 ATCAGATACC TCCAAGCTGC CGGCAATCAG
TGGTGGTGAT GACCGTGCGG 301 ACCGTGGACA TGACCGTGTG CGATTTCCTC
ATCGGATGCA TCGCGCACAC 351 TTTCAACCGT AGCCTTAAAG CGGATTTTCA
TGCCTGCCAA AGGATGGTTG 401 CCGTCCACCA CCGCCTTACC GTCGGCAACA
TCGGTTACAC GATAGACGAC 451 AACATCGCCG GTTTCAGGAT CGTCGGCTTC
AAACATCATG CCGACTTCGA 501 CTTCAACAGG GAACACGCCC GCATCTTCAA
TACGGACCAA CTCCGGATCC 551 TGCTCGCCGA ACGCATCGTC GGGCGAAAGC
GCCACATCGA CCGTATCGCC 601 GGCATCCTTA CCGTGCAACG CCTCTTCCAC
CAAAGGGAAA ATGCCGTCGT 651 AACCGCCGTG CAGATACGCA ATCGGTTCTT
CGGTTTTGTC CAAAAGCTGA 701 TTGTTGGCAT CATACATCTC ATAATGCAGC
GAAACCACGG AATTCTTCAC 751 GATAGCCATA TTTGTCCTTT CAGGAACAGC
AGATTAATTA CAGGCGCATT 801 CTAA
This corresponds to the amino acid sequence <SEQ ID 910; ORF
241.a>:
TABLE-US-01162 a241.pep 1 MPTRPTRAAK HPTPPTWLQT AYCPRPPYRP
PSVQTHTPHE PASSTCAAKS 51 ANRRENFHNA QPTYLLHPSN KMPSEMEQTL
FRRHQIPPSC RQSVVVMTVR 101 TVDMTVCDFL IGCIAHTFNR SLKADFHACQ
RMVAVHHRLT VGNIGYTIDD 151 NIAGFRIVGF KHHADFDFNR EHARIFNTDQ
LRILLAERIV GRKRHIDRIA 201 GILTVQRLFH QRENAVVTAV QIRNRFFGFV
QKLIVGIIHL IMQRNHGILH 251 DSHICPFRNS RLITGAF* m241/a241 96.0%
identity in 177 aa overlap 10 20 30 m241.pep
RQSVVVMTVRAVDMTVCDFLIGCIAHAFNC ||||||||||:|||||||||||||||:|| a241
QPTYLLHPSNKMPSEMEQTLFRRHQIPPSCRQSVVVMTVRTVDMTVCDFLIGCIAHTFNR 70 80
90 100 110 120 40 50 60 70 80 90 m241.pep
SLKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFDTDQ
|||||||||||||||||||:||||||||||||||||||||||||||||||||||||:||| a241
SLKADFHACQRMVAVHHRLTVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFNTDQ 130
140 150 160 170 180 100 110 120 130 140 150 m241.pep
LRILLAERIVGRQRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a241
LRILLAERIVGRKRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL 190
200 210 220 230 240 160 170 m241.pep IMQRNHGIFHDSHICPFRNSRLITGAFX
||||||||:||||||||||||||||||| a241 IMQRNHGILHDSHICPFRNSRLITGAFX 250
260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 911>:
TABLE-US-01163 g241-1.seq 1 ATGATAGAAG TCATACATTT CTTCGGCACC
GAAACGCGCA GACAGTTTGC 51 TTGTGCCGAC GTTGGACGAT TTCTGCATGA
TGCCGCGCAC ATCCAAAGAG 101 GGGTAAACAT GGGTATCGCG CACGGGAGAC
GGTCCGATTT TATAAGGCTG 151 CGTATTCAGC CGTTCGTTCA AATCGGTTTT
GCCCGCATCC AATGCCTTCG 201 CAATCACAAA CGGTTTGATT GCCGAACCGG
GTTCGATCAT ATCGGTTACG 251 GCACGGTTGC GCCGCTGTTC GCTGTCTGCC
CGGCCGGGCC TGTTGGGATC 301 GTAGGCGGGC GTATTGGCCA AGGCGAGGAT
TTCCCCCGTG CGGGCATCCA 351 ArACCACCAC CGTTCCGGCT TTTGCCTGAT
GGTATTCGAC CGCCTTGTTC 401 AACTCTTCAT AGGCCAAGGT CTGAATCCTC
TGATCGAGGG AAAGGATGAT 451 GTCTTTGCCG TTTTTCGGGG CTTTAkTGCG
CGGGGAGTCC AAGCTGTCCA 501 CAATATTGCC CTGCCGGTCC CGCAAAACGA
CTTCCGCGCC GTCTTCGCCA 551 TGCAAGCTGT CTTCAAGCGA AAGTTCCAAA
CCTTCCTGAC CTTTGCCGTC 601 AATATCGGTA AATCCGATGA CGTGTGCAAA
CAGGTTGCCC ATCGGGTAAT 651 GGCGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 912; ORF
241-1.ng>:
TABLE-US-01164 g241-1.pep 1 MPTRPTRAAN PPTPTTWLQT AYCPRPPYRP
PSVQTHTPHE PASSTCAAKS 51 ANRRENSHNA QPTYLLHPSN KMPSETEQTL
FRRHQIPPSC RQSVVVMTVR 101 TVDMTVCDFL IGCIAHAFNR SFKADFHACQ
RMVAVHHRLA VGNIGYTIDD 151 NIAGFRIVRF KHHTDLDFNR ERARIFNTDQ
LRIMLTERIV GRKRHFDRIA 201 GILTVQRLFH QRENAVVTAV QIRNRFFGFI
QKLIVGIIHL IMQRNHGIFC 251 NSHICPFRNS RLITGAF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 913>:
TABLE-US-01165 m241-1.seq 1 ATGCCAACAC GTCCAACTCG CGCTGCAAAC
CCTCCAACCC CGCCAACCTG 51 GCTTCAGACG GCATACTGCC CTCGTCCGCC
ATATCGTCCG CCGTCCGTGC 101 AAACGCGTAC ACCGCGTGAA CCGGCTTCCT
CAACCTGCGC GGCAAAATCA 151 GCGAACCGAC GGGAAAATTC TCATAATGCC
CAACCGACAT ACCTTCTCCA 201 TCCATCAAAC AAAATGCCGT CTGAAACGGA
ACAAACCCTT TTCAGACGGC 251 ATCAGATACC TCCAAGCTGC CGGCAATCAG
TGGTGGTGAT GACCGTGCGG 301 GCCGTGGACA TGACCGTGTG CGATTTCCTC
ATCGGATGCA TCGCGCACGC 351 TTTCAACTGT AGCCTTAAAG CGGATTTTCA
TGCCTGCCAA AGGATGGTTG 401 CCGTCCACCA CCGCCTTGCC GTCGGCAACA
TCGGTTACAC GATAGACGAC 451 AACATCGCCG GTTTCAGGAT CGTCGGCTTC
AAACATCATG CCGACTTCGA 501 CTTCAACAGG GAACACGCCC GCATCTTCGA
TACGGACCAA CTCCGGATCC 551 TGCTCGCCGA ACGCATCGTC GGGCGACAGC
GCCACATCGA CCGTATCGCC 601 GGCATCCTTA CCGTGCAACG CCTCTTCCAC
CAAAGGGAAA ATGCCGTCGT 651 AACCGCCGTG CAGATACGCA ATCGGTTCTT
CGGTTTTGTC CAAAAGCTGA 701 TTGTTGGCAT CATACATCTC ATAATGCAGC
GAAACCACGG AATTTTTCAC 751 GATAGCCATA TTTGTCCTTT CAGGAACAGC
AGATTAATTA CAGGCGCATT 801 CTAA
This corresponds to the amino acid sequence <SEQ ID 914; ORF
241-1>:
TABLE-US-01166 m241-1.pep 1 MPTRPTRAAN PPTPPTWLQT AYCPRPPYRP
PSVQTRTPRE PASSTCAAKS 51 ANRRENSHNA QPTYLLHPSN KMPSETEQTL
FRRHQIPPSC RQSVVVMTVR 101 AVDMTVCDFL IGCIAHAFNC SLKADFHACQ
RMVAVHHRLA VGNIGYTIDD 151 NIAGFRIVGF KHHADFDFNR EHARIFDTDQ
LRILLAERIV GRQRHIDRIA 201 GILTVQRLFH QRENAVVTAV QIRNRFFGFV
QKLIVGIIHL IMQRNHGIFH 251 DSHICPFRNS RLITGAF* m241-1/g241-1 93.3%
identity in 267 aa overlap 10 20 30 40 50 60 m241-1.pep
MPTRPTRAANPPTPPTWLQTAYCPRPPYRPPSVQTRTPREPASSTCAAKSANRRENSHNA
|||||||||||||| ||||||||||||||||||||:||:||||||||||||||||||||| g241
MPTRPTRAANPPTPTTWLQTAYCPRPPYRPPSVQTHTPHEPASSTCAAKSANRRENSHNA 10 20
30 40 50 60 70 80 90 100 110 120 m241-1.pep
QPTYLLHPSNKMPSETEQTLFRRHQIPPSCRQSVVVMTVRAVDMTVCDFLIGCIAHAFNC
||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| g241
QPTYLLHPSNKMPSETEQTLFRRHQIPPSCRQSVVVMTVRTVDMTVCDFLIGCIAHAFNR 70 80
90 100 110 120 130 140 150 160 170 180 m241-1.pep
SLKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFDTDQ
|:|||||||||||||||||||||||||||||||||||| ||||:|:|||||:||||:||| g241
SFKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVRFKHHTDLDFNRERARIFNTDQ 130
140 150 160 170 180 190 200 210 220 230 240 m241-1.pep
LRILLAERIVGRQRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL
|||:|:||||||:||:|||||||||||||||||||||||||||||||||:|||||||||| g241
LRIMLTERIVGRKRHFDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFIQKLIVGIIHL 190
200 210 220 230 240 250 260 m241-1.pep IMQRNHGIFHDSHICPFRNSRLITGAFX
||||||||| :||||||||||||||||| g241 IMQRNHGIFCNSHICPFRNSRLITGAFX 250
260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 915>:
TABLE-US-01167 a241-1.seq 1 ATGCCAACAC GTCCAACTCG CGCCGCAAAG
CATCCAACCC CGCCAACCTG 51 GCTTCAGACG GCATACTGCC CTCGTCCGCC
ATATCGTCCG CCGTCCGTGC 101 AAACGCATAC ACCGCATGAA CCGGCTTCCT
CAACCTGCGC GGCAAAATCA 151 GCGAACCGAC GGGAAAATTT TCATAATGCC
CAACCGACAT ACCTTCTCCA 201 TCCATCAAAC AAAATGCCGT CTGAAATGGA
ACAAACCCTT TTCAGACGGC 251 ATCAGATACC TCCAAGCTGC CGGCAATCAG
TGGTGGTGAT GACCGTGCGG 301 ACCGTGGACA TGACCGTGTG CGATTTCCTC
ATCGGATGCA TCGCGCACAC 351 TTTCAACCGT AGCCTTAAAG CGGATTTTCA
TGCCTGCCAA AGGATGGTTG 401 CCGTCCACCA CCGCCTTACC GTCGGCAACA
TCGGTTACAC GATAGACGAC 451 AACATCGCCG GTTTCAGGAT CGTCGGCTTC
AAACATCATG CCGACTTCGA 501 CTTCAACAGG GAACACGCCC GCATCTTCAA
TACGGACCAA CTCCGGATCC 551 TGCTCGCCGA ACGCATCGTC GGGCGAAAGC
GCCACATCGA CCGTATCGCC 601 GGCATCCTTA CCGTGCAACG CCTCTTCCAC
CAAAGGGAAA ATGCCGTCGT 651 AACCGCCGTG CAGATACGCA ATCGGTTCTT
CGGTTTTGTC CAAAAGCTGA 701 TTGTTGGCAT CATACATCTC ATAATGCAGC
GAAACCACGG AATTCTTCAC 751 GATAGCCATA TTTGTCCTTT CAGGAACAGC
AGATTAATTA CAGGCGCATT 801 CTAA
This corresponds to the amino acid sequence <SEQ ID 916; ORF
241-1.a>:
TABLE-US-01168 a241-1.pep 1 MPTRPTRAAK HPTPPTWLQT AYCPRPPYRP
PSVQTHTPHE PASSTCAAKS 51 ANRRENFHNA QPTYLLHPSN KMPSEMEQTL
FRRHQIPPSC RQSVVVMTVR 101 TVDMTVCDFL IGCIAHTFNR SLKADFHACQ
RMVAVHHRLT VGNIGYTIDD 151 NIAGFRIVGF KHHADFDFNR EHARIFNTDQ
LRILLAERIV GRKRHIDRIA 201 GILTVQRLFH QRENAVVTAV QIRNRFFGFV
QKLIVGIIHL IMQRNHGILH 251 DSHICPFRNS RLITGAF* m241-1/a241-1 95.1%
identity in 267 aa overlap 10 20 30 40 50 60 m241-1.pep
MPTRPTRAANPPTPPTWLQTAYCPRPPYRPPSVQTRTPREPASSTCAAKSANRRENSHNA
|||||||||: ||||||||||||||||||||||||:||:||||||||||||||||| ||| a241
MPTRPTRAAKHPTPPTWLQTAYCPRPPYRPPSVQTHTPHEPASSTCAAKSANRRENFHNA 10 20
30 40 50 60 70 80 90 100 110 120 m241-1.pep
QPTYLLHPSNKMPSETEQTLFRRHQIPPSCRQSVVVMTVRAVDMTVCDFLIGCIAHAFNC
||||||||||||||| ||||||||||||||||||||||||:|||||||||||||||:|| a241
QPTYLLHPSNKMPSEMEQTLFRRHQIPPSCRQSVVVMTVRTVDMTVCDFLIGCIAHTFNR 70 80
90 100 110 120 130 140 150 160 170 180 m241-1.pep
SLKADFHACQRMVAVHHRLAVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFDTDQ
|||||||||||||||||||:||||||||||||||||||||||||||||||||||||:||| a241
SLKADFHACQRMVAVHHRLTVGNIGYTIDDNIAGFRIVGFKHHADFDFNREHARIFNTDQ 130
140 150 160 170 180 190 200 210 220 230 240 m241-1.pep
LRILLAERIVGRQRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a241
LRILLAERIVGRKRHIDRIAGILTVQRLFHQRENAVVTAVQIRNRFFGFVQKLIVGIIHL 190
200 210 220 230 240 250 260 m241-1.pep IMQRNHGIFHDSHICPFRNSRLITGAFX
||||||||:||||||||||||||||||| a241 IMQRNHGILHDSHICPFRNSRLITGAFX 250
260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 917>:
TABLE-US-01169 g242.seq 1 atgatcggcg aacttgttgt tttgttcgtg
atcgagcact tcaagcaacg 51 cgctggcggg atcgccccga aagtcgctgc
ccaatttgtc gatttcgtcg 101 agcaggaaca acgggtttct tacgcctgct
tttgccatat tctgcaaaat 151 cttgccgggc atagagccga tataggtacg
gcggtgcccg cggatttcgc 201 tttcgtcgcg cacgccgccc aaggccatac
ggacatattt ccgccccgtt 251 gctttggcga tggattcgcc caaagaggtt
ttgcccacgc ccggagggcc 301 gaccaaacac agaatcggac ctttgagctt
gtccatacgt ttttggacgg 351 cgaggtattc caaaatccgt tctttgactt
tttccaggcc gtagtggtcg 401 gcatccagca ccagtccggc tttggcgatg
tctttgctga cgcgggattt 451 tttcttccac ggcagtccga gcagggtgtc
gatgtagttg cgtacgacgg 501 tggattcggc agacatcggc ggcatcattt
tgagtttttt cagttcggac 551 aggcattttt cttccgcttc tttggtcata
cccgcctttt tgatgcctgc 601 ctccaaggca tccagttcgc cgttttcgtc
ttcttcgccc aattctttgt 651 gtatcgcttt aatctgttcg ttcagataat
attcgcgttg ggatttttcc 701 atttggcgtt tgacgcgtcc gcgtatgcgt
ttttcggcct gcataatgtc 751 gagttcggat tccagctttg ccagcaggaa
ttccatccgt ttgccgattt 801 cgggaatctc caaaatctgt tggcgttgcg
ccagtttcaa ctgcaaatgc 851 gctgcgaccg tatcggttag
This corresponds to the amino acid sequence <SEQ ID 918; ORF
242.ng>:
TABLE-US-01170 g242.pep 1 MIGELVVLFV IEHFKQRAGG IAPKVAAQFV
DFVEQEQRVS YACFCHILQN 51 LAGHRADIGT AVPADFAFVA HAAQGHTDIF
PPRCFGDGFA QRGFAHARRA 101 DQTQNRTFEL VHTFLDGEVF QNPFFDFFQA
VVVGIQHQSG FGDVFADAGF 151 FLPRQSEQGV DVVAYDGGFG RHRRHHFEFF
QFGQAFFFRF FGHTRLFDAC 201 LQGIQFAVFV FFAQFFVYRF NLFVQIIFAL
GFFHLAFDAS AYAFFGLHNV 251 EFGFQLCQQE FHPFADFGNL QNLLALRQFQ
LQMRCDRIG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 919>:
TABLE-US-01171 m242.seq 1 ATGATCGGCA AACTTGTTGT TTTGTTCGGG
ATCGAGCACT TCGAGCAACG 51 CGCTGGCGGG ATCGCCTCGG AAGTCGTTAC
CCAATTTGTC GATTTCGTCG 101 AGCAGGAACA AGGGGTTTTT CACGCCGGCT
TTTGCCATAT TCTGCAAAAT 151 CTTACCGGGC ATAGAGCCGA TATAGGTGCG
GCGGTGTCCC CTGATTTCGC 201 TTTCGTCGCG CACGCCGCCC AAAGCCATGC
GGACATATTT CCGCCCCGTT 251 GCTTTGGCGA TGGATTCGCC CAAAGAGGTT
TTGCCCACGC CCGGAGGGCC 301 GACCAGGCAC AGAATCGGGC CTTTGAGTTT
GTCCATACGT TTTTGGACGG 351 CGAGGTATTC CAAAATCCGT TCTTTGACTT
TTTCCAGGCC GTAGTGGTCG 401 GCATCCAGCA CCAGTCCGGC TTTGGCGATG
TCTTTGCTGA CGCGGGATTT 451 TTTCTTCCAC GGCAGCTCGA GCAAAGTGTC
GATGTAGTTG CGTACGACGG 501 TGGATTCCGC AGACATCGGT GGCATCATTT
TGAGCTTTTT CAGTTCGGAC 551 AGGCATTTTT CTTCCGCTTC TTTGGTCATA
CCCGCCTTTT TGATATCTGC 601 TTCCAAGGCA TCCAGTTCGC CGTTTTCGTC
TTCTTCGCCC AGTTCTTTGT 651 GTATCGCTTT AATCTGTTCG TTCAGATAAT
ATTCGCGCTG GGATTTTTCC 701 ATTTGGCGTT TGACGCGTCC GCGTATGCGT
TTTTCGGCCT GCATAATGTC 751 GAGTTCGGAT TCCAGCTGTG CCAGCAGGAA
TTCCATCCGT TTGCCGATTT 801 CGGGAATTTC CAAAATCTGT TGGCGTTGCG
CCAGTTTCAA CTGCAAATGC 851 GCTGCGACCG TATCGGTTAG
This corresponds to the amino acid sequence <SEQ ID 920; ORF
242>:
TABLE-US-01172 m242.pep 1 MIGKLVVLFG IEHFEQRAGG IASEVVTQFV
DFVEQEQGVF HAGFCHILQN 51 LTGHRADIGA AVSPDFAFVA HAAQSHADIF
PPRCFGDGFA QRGFAHARRA 101 DQAQNRAFEF VHTFLDGEVF QNPFFDFFQA
VVVGIQHQSG FGDVFADAGF 151 FLPRQLEQSV DVVAYDGGFR RHRWHHFELF
QFGQAFFFRF FGHTRLFDIC 201 FQGIQFAVFV FFAQFFVYRF NLFVQIIFAL
GFFHLAFDAS AYAFFGLHNV 251 EFGFQLCQQE FHPFADFGNF QNLLALRQFQ
LQMRCDRIG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 242
shows 90.3% identity over a 289 aa overlap with a predicted ORF
(ORF 242.ng) from N. gonorrhoeae:
TABLE-US-01173 m242/g242 90.3% identity in 289 aa overlap 10 20 30
40 50 60 m242.pep
MIGKLVVLFGIEHFEQRAGGIASEVVTQFVDFVEQEQGVFHAGFCHILQNLTGHRADIGA
|||:||||| ||||:||||||| :|::|||||||||| | :| ||||||||:|||||||: g242
MIGELVVLFVIEHFKQRAGGIAPKVAAQFVDFVEQEQRVSYACFCHILQNLAGHRADIGT 10 20
30 40 50 60 70 80 90 100 110 120 m242.pep
AVSPDFAFVAHAAQSHADIFPPRCFGDGFAQRGFAHARRADQAQNRAFEFVHTFLDGEVF ||
||||||||||:|:|||||||||||||||||||||||||:|||:||:|||||||||| g242
AVPADFAFVAHAAQGHTDIFPPRCFGDGFAQRGFAHARRADQTQNRTFELVHTFLDGEVF 70 80
90 100 110 120 130 140 150 160 170 180 m242.pep
QNPFFDFFQAVVVGIQHQSGFGDVFADAGFFLPRQLEQSVDVVAYDGGFRRHRWHHFELF
||||||||||||||||||||||||||||||||||| ||:|||||||||| ||| ||||:| g242
QNPFFDFFQAVVVGIQHQSGFGDVFADAGFFLPRQSEQGVDVVAYDGGFGRHRRHHFEFF 130
140 150 160 170 180 190 200 210 220 230 240 m242.pep
QFGQAFFFRFFGHTRLFDICFQGIQFAVFVFFAQFFVYRFNLFVQIIFALGFFHLAFDAS
|||||||||||||||||| |:||||||||||||||||||||||||||||||||||||||| g242
QFGQAFFFRFFGHTRLFDACLQGIQFAVFVFFAQFFVYRFNLFVQIIFALGFFHLAFDAS 190
200 210 220 230 240 250 260 270 280 290 m242.pep
AYAFFGLHNVEFGFQLCQQEFHPFADFGNFQNLLALRQFQLQMRCDRIGX
|||||||||||||||||||||||||||||:|||||||||||||||||||| g242
AYAFFGLHNVEFGFQLCQQEFHPFADFGNLQNLLALRQFQLQMRCDRIGX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 921>:
TABLE-US-01174 a242.seq 1 ATGATCGGCG AACTTGTTGT TTTGCTCGGG
ATCAAGCACT TCGAGCAACG 51 CGCTGGCGGG ATCGCCCCGG AAGTCGCTAN
CCAATTTGTC GATTTCGTCG 101 AGCAGGAACA ATGGGTTTTT TACGCCGGCT
TTTGCCATAT TCTGCAAAAT 151 CTTACCGGGC ATGGAGCCGA TATAGGTGCG
GCGGTGTCCC CGGATTTCGC 201 TTTCGTCGCG CACGCCGCCC AAAGCCATGC
GGACATATTT CCGCCCCGTT 251 GCTTTGGCGA TGGATTCGCC CAAAGAGGTT
TTGCCCACGC CTGGAGGGCC 301 GACCAGGCAC AGAATCGGGC CTTTGAGTTT
GTCCATACGT TTTTGGACGG 351 CGAGGTATTC CAAAATCCGT TCTTTGACTT
TTTCCAGGCC GTAGTGGTCG 401 GTATCCAGCA CCAATCCGGC TTTGGCGATG
TCTTTGCTGA CGCGGGATTT 451 TTTCTTCCAC GGCAGTTCGA GCAGGGTGTC
GATGTAGTTG CGTACGACGG 501 TGGATTCGGC AGACATCGGC GGCATCATTT
TGAGCTTTTT CAGTTCGGAC 551 AGGCATTTTT CTTCCGCTTC TTTGGTCATA
CCCGCCTTTT TGATATCTGC 601 TTCCAAGGCA TCCAGTTCGC CGTTTTCGTC
TTCTTCGCCC AGTTCTTTGT 651 GTATCGCTTT AATCTGTTCG TTCAGATAAT
ATTCGCGCTG GGATTTTTCC 701 ATTTGGCGTT TGACGCGTCC GCGTATGCGT
TTTTCGGCCT GCATAATGTC 751 GAGTTCGGAT TCCAGCTGTG CCAGCAGGAA
TTCCATCCGT TTGCCGATTT 801 CGGGAATTTC CAAAATCTGT TGGCGTTGCG
CCAGTTTCAA CTGCAAATGC 851 GCTGCGACCG TATCGGTTAG
This corresponds to the amino acid sequence <SEQ ID 922; ORF
242.a>:
TABLE-US-01175 a242.pep 1 MIGELVVLLG IKHFEQRAGG IAPEVAXQFV
DFVEQEQWVF YAGFCHILQN 51 LTGHGADIGA AVSPDFAFVA HAAQSHADIF
PPRCFGDGFA QRGFAHAWRA 101 DQAQNRAFEF VHTFLDGEVF QNPFFDFFQA
VVVGIQHQSG FGDVFADAGF 151 FLPRQFEQGV DVVAYDGGFG RHRRHHFELF
QFGQAFFFRF FGHTRLFDIC 201 FQGIQFAVFV FFAQFFVYRF NLFVQIIFAL
GFFHLAFDAS AYAFFGLHNV 251 EFGFQLCQQE FHPFADFGNF QNLLALRQFQ
LQMRCDRIG* m242/a242 95.2% identity in 289 aa overlap 10 20 30 40
50 60 m242.pep
MIGKLVVLFGIEHFEQRAGGIASEVVTQFVDFVEQEQGVFHAGFCHILQNLTGHRADIGA
|||:||||:||:|||||||||| ||::|||||||||| ||:||||||||||||| ||||| a242
MIGELVVLLGIKHFEQRAGGIAPEVAXQFVDFVEQEQWVFYAGFCHILQNLIGHGADIGA 10 20
30 40 50 60 70 80 90 100 110 120 m242.pep
AVSPDFAFVAHAAQSHADIFPPRCFGDGFAQRGFAHARRADQAQNRAFEFVHTFLDGEVF
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| a242
AVSPDFAFVAHAAQSHADIFPPRCFGDGFAQRGFAHAWRADQAQNRAFEFVHTFLDGEVF 70 80
90 100 110 120 130 140 150 160 170 180 m242.pep
QNPFFDFFQAVVVGIQHQSGFGDVFADAGFFLPRQLEQSVDVVAYDGGFRRHRWHHFELF
|||||||||||||||||||||||||||||||||||:||:|||||||||| ||| |||||| a242
QNPFFDFFQAVVVGIQHQSGFGDVFADAGFFLPRQFEQGVDVVAYDGGFGRHRRHHFELF 130
140 150 160 170 180 190 200 210 220 230 240 m242.pep
QFGQAFFFRFFGHTRLFDICFQGIQFAVFVFFAQFFVYRFNLFVQIIFALGFFHLAFDAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a242
QFGQAFFFRFFGHTRLFDICFQGIQFAVFVFFAQFFVYRFNLFVQIIFALGFFHLAFDAS 190
200 210 220 230 240 250 260 270 280 290 m242.pep
AYAFFGLHNVEFGFQLCQQEFHPFADFGNFQNLLALRQFQLQMRCDRIGX
|||||||||||||||||||||||||||||||||||||||||||||||||| a242
AYAFFGLHNVEFGFQLCQQEFHPFADFGNFQNLLALRQFQLQMRCDRIGX 250 260 270 280
290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 923>:
TABLE-US-01176 g243.seq 1 ATGGTaatcg tctGGTTGCc cgAGTTaccg
CCGATGCCGG CGACGATGGG 51 CATCAGCGCG GCGAGTGCGA CGATTTTTTC
gatactgcCT TCAAACGCGC 101 CGATGACGCG GCTGGCGAGG AAGGCGGTGC
AGAGGTTGAC GGCGAGCCAC 151 ATCCAGCGGT TTTTGACGGA ATCCAAGACG
GGGGCGAACA GGTCTTCCTC 201 TTCCTGCAAA CCTGCCATGT TCAACATATC
CGCTTCGGAT TCTTCGCGGA 251 TCACGTCCAC CATCTCGTCG ATGGTAATCc
tgCCGATGAG CTTTTTGTTT 301 TCATCAACGA CGGGCGCGGT AACCAAGTCG TAG
This corresponds to the amino acid sequence <SEQ ID 924; ORF
243.ng>:
TABLE-US-01177 g243.pep 1 MVIVWLPELP PMPATMGISA ASATIFSILP
SNAPMTRLAR KAVQRLTASH 51 IQRFLTESKT GANRSSSSCK PAMFNISASD
SSRITSTISS MVILPMSFLF 101 SSTTGAVTKS *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 925>:
TABLE-US-01178 m243.seq 1 ATGGTAATCG TCTGGTTGCC CGAGTTACCG
CCTATGCCGG CGACGATGGG 51 CATCAGCGCG GyGAGTGCGA CGATTTTTTC
GATGCTGCCT TCAAACGCGC 101 CGATAACACG GyTGGCGAGG AAGGCGGTGC
AGAGGTTGAC GGCGAGCCAC 151 ATCCAGyGGT TTTTCACCGA ATCCCACACG
GGGGCGAAyA GGTCTTCCTC 201 TTCCTGCAAA CCCGCCATAT TCAGCATATC
CGCTTCCGAT TCTTCGCGGA 251 TCACGTCCAC CATCTCGTCG ATGGTAATCC
TGCCGATGAG CTTTTTGTTT 301 TCATCGACGA CGGGCGCGGT AACCAAGTCG TAG
This corresponds to the amino acid sequence <SEQ ID 926; ORF
243>:
TABLE-US-01179 m243.pep 1 MVIVWLPELP PMPATMGISA XSATIFSMLP
SNAPITRLAR KAVQRLTASH 51 IQXFFTESHT GANRSSSSCK PAIFSISASD
SSRITSTISS MVILPMSFLF 101 SSTTGAVTKS *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 243
shows 92.7% identity over a 110 aa overlap with a predicted ORF
(ORF 243.ng) from N. gonorrhoeae:
TABLE-US-01180 m243/g243 10 20 30 40 50 60 m243.pep
MVIVWLPELPPMPATMGISAXSATIFSMLPSNAPITRLARKAVQRLTASHIQXFFTESHT
|||||||||||||||||||| ||||||:||||||:||||||||||||||||| |:|||:| g243
MVIVWLPELPPMPATMGISAASATIFSILPSNAPMTRLARKAVQRLTASHIQRFLTESKT 10 20
30 40 50 60 70 80 90 100 110 m243.pep
GANRSSSSCKPAIFSISASDSSRITSTISSMVILPMSFLFSSTTGAVTKSX
||||||||||||:|:|||||||||||||||||||||||||||||||||||| g243
GANRSSSSCKPAMFNISASDSSRITSTISSMVILPMSFLFSSTTGAVTKSX 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 927>:
TABLE-US-01181 a243.seq 1 ATGGTAATCG TCTGGTTGCC CGAGTTACCG
CCTATGCCGG CGACGATGGG 51 CATCAGCGCG GCGAGTGCGA CGATTTTTTC
GATGCTGCCT TCAAACGCGC 101 CGATAACACG GCTGGCGAGG AAGGCGGTGC
AGAGGTTGAC GGCGAGCCAC 151 ATCCAGCGGT TTTTGACGGA ATCCAAGACG
GGGGCGAATA AGTCTTCCTC 201 TTCTTGCAAA CCCGCCATAT TCAACATATC
CGCTTCGGAT TCTTCGCGGA 251 TCACGTCCAC CATTTCGTCA ACGGTCACCC
TGCCGATGAG CTTTTTGTTT 301 TCATCGACGA CGGGCGCGGT AACCAAGTCA TAG
This corresponds to the amino acid sequence <SEQ ID 928; ORF
243.a>:
TABLE-US-01182 a243.pep 1 MVIVWLPELP PMPATMGISA ASATIFSMLP
SNAPITRLAR KAVQRLTASH 51 IQRFLTESKT GANKSSSSCK PAIFNISASD
SSRITSTISS TVTLPMSFLF 101 SSTTGAVTKS * m243/a243 92.7% identity in
110 aa overlap 10 20 30 40 50 60 m243.pep
MVIVWLPELPPMPATMGISAXSATIFSMLPSNAPITRLARKAVQRLTASHIQXFFTESHT
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |:|||:| a243
MVIVWLPELPPMPATMGISAASATIFSMLPSNAPITRLARKAVQRLTASHIQRFLTESKT 10 20
30 40 50 60 70 80 90 100 110 m243.pep
GANRSSSSCKPAIFSISASDSSRITSTISSMVILPMSFLFSSTTGAVTKSX
|||:||||||||||:||||||||||||||| | |||||||||||||||||| a243
GANKSSSSCKPAIFNISASDSSRITSTISSTVTLPMSFLFSSTTGAVTKSX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 929>:
TABLE-US-01183 g244.seq 1 atgccgcctg aagcccggcc ggcgggttca
gacggcattg ccgctttact 51 tcgatcggtt tatacgcaaa acgcgcttca
ggaaataaat cagattattc 101 cccagacgcc ttcaggcttc cttccgtgcc
accgtaacca tagccgggcg 151 caacacacgg tcggacaggg tataaccctt
cttcatcaca ccaaccacgg 201 tattgggttc ctgctcactg gccaccgcct
gcatcgcctg atggatattc 251 ggatcgagct tatcgcccgc tttaggattg
atttccttga tttgcgtggc 301 atcaaacgcc ttctgcaact cattcaaagt
catctgcaca cccattttca 351 gcgcatcgaa attaccgctc tgatccaaaa
gcgccatttc cagataatcc 401 ttgaccggca acatttccac ggcaaacttc
tgtccggcga acttgtgcgt 451 atcggcaatt tcctgctggt ggcggcggcg
caggttttgc tcgtttgcca 501 aagcgcgcag ttgttcgtct ttcaactgcg
cttccagctc ggcaatccgc 551 gcctgcaaat cctcataagc cggctcggcg
gcagcctgtt cctgtacacc 601 gtccgcattt cctactgtct cgacggtttc
caccgcctcc acattttcaa 651 ccgcttcttc actgttttgc tgctgtgtct
gttcgctcat atcgtatccc 701 tcaaaacaaa ttggaaatca aaatccggtt
attacccgag caagataagg 751 acattttcaa gaaacttcaa gcaaaggcag
gaaatttcac atccgccgcc 801 gaatacccta ccgcaaaaac catataaacg gtaa
This corresponds to the amino acid sequence <SEQ ID 930; ORF
244.ng>:
TABLE-US-01184 g244.pep 1 MPPEARPAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LPCHRNHSRA 51 QHTVGQGITL LHHTNHGIGF LLTGHRLHRL
MDIRIELIAR FRIDFLDLRG 101 IKRLLQLIQS HLHTHFQRIE ITALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IGNFLLVAAA QVLLVCQSAQ LFVFQLRFQL
GNPRLQILIS RLGGSLFLYT 201 VRISYCLDGF HRLHIFNRFF TVLLLCLFAH
IVSLKTNWKS KSGYYPSKIR 251 TFSRNFKQRQ EISHPPPNTL PQKPYKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 931>:
TABLE-US-01185 m244.seq 1 ATGCCGTCTG AAGCCCGACA GGCGGGTTCA
GACGGCATTG CCGCTTTACT 51 TCGATCGGTT TATACGCAAA ACGCGCTTCA
GGAAATAAAT CAGATTATTC 101 CCCAGACGCC TTCAGGCTTC CTTCTGCGCC
ACCGTAACCA TAGCCGGGCG 151 CAACACGCGG TCGGACAGCG TATAACCCTT
CTTCATCACA CCCACCACGG 201 TATTCGGCTC CTGTTCGCTT GCCACCGCCT
GCATCGCCTG ATGGATATTC 251 GGATCGAGCT TATCGCCCGC TTTAGGGTTG
ATTTCCTTGA TTTGCGTAGC 301 ATCAAATGCT TTCTGCAACT CGTTCAAAGT
CATCTGCACG CCCATTTTCA 351 GCGCATCGAA ATTGCCGCTC TGATCCAAAA
GCGCCATTTC CAGATAATCC 401 TTGACCGGCA GCATTTCCAC GGCAAACTTC
TGTCCGGCGA ACTTGTGCGT 451 ATCCGCAATT TyCTGCTGGT GGCGGCGGCG
CAGGTTTTGC TCGTTTGCCA 501 AAGCGCGCTG CTCGTCTTTC AACTGCGTTT
CCAGCTCGGC AATCCGCGCC 551 TGCAAATCCT CATAAGCCGG CTCTGCGGCA
GCCTGTTCCT GCACACCGTC 601 CGCATTTCCT ACTGTTTCGA CGGTTTCCAC
CGCCTCCACA TTTTCAACCG 651 CTTCTTCACT GTTTTGCTGC TGTGTCTGTT
CGCTCATATC GTATCCCTTA 701 AAACAAATTG GAAATCAAAA TCCAGTTATT
ACCCGCGCAA GATAAGGACA 751 TTTTCAAGAA ACTTCAAkCA AAAkCAGAGA
ATTTCAAATT CATTTTCAAA 801 TCCCCTACCG AAAAAATAAT ATAGACGGTA A
This corresponds to the amino acid sequence <SEQ ID 932; ORF
244>:
TABLE-US-01186 m244.pep 1 MPSEARQAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LLRHRNHSRA 51 QHAVGQRITL LHHTHHGIRL LFACHRLHRL
MDIRIELIAR FRVDFLDLRS 101 IKCFLQLVQS HLHAHFQRIE IAALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IRNFLLVAAA QVLLVCQSAL LVFQLRFQLG
NPRLQILISR LCGSLFLHTV 201 RISYCFDGFH RLHIFNRFFT VLLLCLFAHI
VSLKTNWKSK SSYYPRKIRT 251 FSRNFXQXQR ISNSFSNPLP KKXYRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 244
shows 86.3% identity over a 277 aa overlap with a predicted ORF
(ORF 244.ng) from N. gonorrhoeae:
TABLE-US-01187 M244/G244 10 20 30 40 50 60 m244.pep
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLRHRNHSRAQHAVGQRITL || |||
|||||||||||||||||||||||||||||||||| |||||||||:||| ||| g244
MPPEARPAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLPCHRNHSRAQHTVGQGITL 10 20
30 40 50 60 70 80 90 100 110 120 m244.pep
LHHTHHGIRLLFACHRLHRLMDIRIELIARFRVDFLDLRSIKCFLQLVQSHLHAHFQRIE
||||:||| :|:: ||||||||||||||||||:||||||:|| :|||:|||||:|||||| g244
LHHTNHGIGFLLTGHRLHRLMDIRIELIARFRIDFLDLRGIKRLLQLIQSHLHTHFQRIE 70 80
90 100 110 120 130 140 150 160 170 180 m244.pep
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSAALLVFQLRFQL
|:||||||||||||||||||||||||||||| ||||||||||||||||| |:|||||||| g244
ITALIQKRHFQIILDRQHFHGKLLSGELVRIGNFLLVAAAQVLLVCQSAQLFVFQLRFQL 130
140 150 160 170 180 190 200 210 220 230 240 m244.pep
GNPRLQILISRLCGSLFLHTVRISYCFDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS
|||||||||||| |||||:|||||||:||||||||||||||||||||||||||||||||| g244
GNPRLQILISRLGGSLFLYTVRISYCLDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS 190
200 210 220 230 240 250 260 270 m244.pep
KSSYYPRKIRTFSRNFXQXQRISNSFSNPLPKKXYRRX ||:||| ||||||||| | |:||: |
||:| |:|| g244 KSGYYPSKIRTFSRNFKQRQEISHPPPNTLPQKPYKRX 250 260
270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 933>:
TABLE-US-01188 a244.seq 1 ATGCCGTCTG AAGCCCGACA GGCGGGTTCA
GACGGCATTG CCGCTTTACT 51 TCGATCGGTT TATACGCAAA ACGCGCTTCA
GGAAATAAAT CAGATTATTC 101 CCCAGACGCC TTCAGGCTTC CTTCTGTGCC
ACCGTAACCA TAGCCGGGCG 151 CAACACGCGG TCGGACAGCG TATAACCCTT
CTTCATCACG CCCACCACGG 201 TATTGGGTTC CTGTTCGCTT GCCACCGCCT
GCATCGCCTG ATGGATATTC 251 GGATCGAGCT TATCGCCCGC TTTAGGATTG
ATTTCCTTGA TTTGCGTAGC 301 ATCAAATGCT TTCTGCAACT CGTTCAAAGT
CATCTGCACG CCCATTTTCA 351 GCGCATCGAA ATTGCCGCTC TGATCCAAAA
GCGCCATTTC CAGATAATCC 401 TTGACCGGCA GCATTTCCAC GGCAAACTTC
TGTCCGGCGA ACTTGTGCGT 451 ATCCGCAATT TCCTGCTGGT GGCGGCGGCG
CAGGTTTTGC TCGTTTGCCA 501 AAGCGCGCAG CTGCTCGTCT TTCAACTGCG
CTTCCAGCTC GGCAATCCGC 551 GCCTGCAAAT CCTCATAAGC CGGCTCTGCG
GCAGCCTGTT CCTGCACACC 601 GTCCGCATTT CCTACTGTCT CGACGGTTTC
CACCGCCTCC ACATTTTCAA 651 CCGCTTCTTC ACTGTTTTGC TGCTGTGTCT
GTTCGCTCAT ATCGTATCCC 701 TTAAAACAAA TTGGAAATCA AAATCCAGTT
ATTACCCGCG CAAGATAAGG 751 ACATTTTCAA GAAACTTCAA GCAAAGGCAG
AGAATTTCAA ATTCATTTTC 801 AAATCCCCTA CCGAAAAAAT AATATAGACG GTAA
This corresponds to the amino acid sequence <SEQ ID 934; ORF
244.a>:
TABLE-US-01189 a244.pep 1 MPSEARQAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LLCHRNHSRA 51 QHAVGQRITL LHHAHHGIGF LFACHRLHRL
MDIRIELIAR FRIDFLDLRS 101 IKCFLQLVQS HLHAHFQRIE IAALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IRNFLLVAAA QVLLVCQSAQ LLVFQLRFQL
GNPRLQILIS RLCGSLFLHT 201 VRISYCLDGF HRLHIFNRFF TVLLLCLFAH
IVSLKTNWKS KSSYYPRKIR 251 TFSRNFKQRQ RISNSFSNPL PKK*YRR* m244/a244
96.8% identity in 277 aa overlap 10 20 30 40 50 60 m244.pep
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLRHRNHSRAQHAVGQRITL
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| a244
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLCHRNHSRAQHAVGQRITL 10 20
30 40 50 60 70 80 90 100 110 120 m244.pep
LHHTHHGIRLLFACHRLHRLMDIRIELIARFRVDFLDLRSIKCFLQLVQSHLHAHFQRIE
|||:|||| :||||||||||||||||||||||:||||||||||||||||||||||||||| a244
LHHAHHGIGFLFACHRLHRLMDIRIELIARFRIDFLDLRSIKCFLQLVQSHLHAHFQRIE 70 80
90 100 110 120 130 140 150 160 170 179 m244.pep
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSA-LLVFQLRFQL
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a244
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSAQLLVFQLRFQL 130
140 150 160 170 179 180 190 200 210 220 230 239 m244.pep
GNPRLQILISRLCGSLFLHTVRISYCFDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a244
GNPRLQILISRLCGSLFLHTVRISYCLDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS 190
200 210 220 230 240 240 250 260 270 m244.pep
KSSYYPRKIRTFSRNFXQXQRISNSFSNPLPKKXYRRX |||||||||||||||| |
||||||||||||||||||| a244 KSSYYPRKIRTFSRNFKQRQRISNSFSNPLPKKXYRRX 240
250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 935>:
TABLE-US-01190 g244-1.seq 1 atgccgcctg aagcccggcc ggcgggttca
gacggcattg ccgctttact 51 tcgatcggtt tatacgcaaa acgcgcttca
ggaaataaat cagattattc 101 cccagacgcc ttcaggcttc cttccgtgcc
accgtaacca tagccgggcg 151 caacacacgg tcggacaggg tataaccctt
cttcatcaca ccaaccacgg 201 tattgggttc ctgctcactg gccaccgcct
gcatcgcctg atggatattc 251 ggatcgagct tatcgcccgc tttaggattg
atttccttga tttgcgtggc 301 atcaaacgcc ttctgcaact cattcaaagt
catctgcaca cccattttca 351 gcgcatcgaa attaccgctc tgatccaaaa
gcgccatttc cagataatcc 401 ttgaccggca acatttccac ggcaaacttc
tgtccggcga acttgtgcgt 451 atcggcaatt tcctgctggt ggcggcggcg
caggttttgc tcgtttgcca 501 aagcgcgcag ttgttcgtct ttcaactgcg
cttccagctc ggcaatccgc 551 gcctgcaaat cctcataagc cggctcggcg
gcagcctgtt cctgtacacc 601 gtccgcattt cctactgtct cgacggtttc
caccgcctcc acattttcaa 651 ccgcttcttc actgttttgc tgctgtgtct
gttcgctcat atcgtatccc 701 tcaaaacaaa ttggaaatca aaatccggtt
attacccgag caagataagg 751 acattttcaa gaaacttcaa gcaaaggcag
gaaatttcac atccgccgcc 801 gaatacccta ccgcaaaaac catataaacg gtaa
This corresponds to the amino acid sequence <SEQ ID 936; ORF
244-1.ng>:
TABLE-US-01191 g244-1.pep 1 MPPEARPAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LPCHRNHSRA 51 QHTVGQGITL LHHTNHGIGF LLTGHRLHRL
MDIRIELIAR FRIDFLDLRG 101 IKRLLQLIQS HLHTHFQRIE ITALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IGNFLLVAAA QVLLVCQSAQ LFVFQLRFQL
GNPRLQILIS RLGGSLFLYT 201 VRISYCLDGF HRLHIFNRFF TVLLLCLFAH
IVSLKTNWKS KSGYYPSKIR 251 TFSRNFKQRQ EISHPPPNTL PQKPYKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 937>:
TABLE-US-01192 m244-1.seq 1 ATGCCGTCTG AAGCCCGACA GGCGGGTTCA
GACGGCATTG CCGCTTTACT 51 TCGATCGGTT TATACGCAAA ACGCGCTTCA
GGAAATAAAT CAGATTATTC 101 CCCAGACGCC TTCAGGCTTC CTTCTGCGCC
ACCGTAACCA TAGCCGGGCG 151 CAACACGCGG TCGGACAGCG TATAACCCTT
CTTCATCACA CCCACCACGG 201 TATTCGGCTC CTGTTCGCTT GCCACCGCCT
GCATCGCCTG ATGGATATTC 251 GGATCGAGCT TATCGCCCGC TTTAGGGTTG
ATTTCCTTGA TTTGCGTAGC 301 ATCAAATGCT TTCTGCAACT CGTTCAAAGT
CATCTGCACG CCCATTTTCA 351 GCGCATCGAA ATTGCCGCTC TGATCCAAAA
GCGCCATTTC CAGATAATCC 401 TTGACCGGCA GCATTTCCAC GGCAAACTTC
TGTCCGGCGA ACTTGTGCGT 451 ATCCGCAATT TyCTGCTGGT GGCGGCGGCG
CAGGTTTTGC TCGTTTGCCA 501 AAGCGCGCTG CTCGTCTTTC AACTGCGTTT
CCAGCTCGGC AATCCGCGCC 551 TGCAAATCCT CATAAGCCGG CTCTGCGGCA
GCCTGTTCCT GCACACCGTC 601 CGCATTTCCT ACTGTTTCGA CGGTTTCCAC
CGCCTCCACA TTTTCAACCG 651 CTTCTTCACT GTTTTGCTGC TGTGTCTGTT
CGCTCATATC GTATCCCTTA 701 AAACAAATTG GAAATCAAAA TCCAGTTATT
ACCCGCGCAA GATAAGGACA 751 TTTTCAAGAA ACTTCAAkCA AAAkCAGAGA
ATTTCAAATT CATTTTCAAA 801 TCCCCTACCG AAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 938; ORF
244-1>:
TABLE-US-01193 m244-1.pep 1 MPSEARQAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LLRHRNHSRA 51 QHAVGQRITL LHHTHHGIRL LFACHRLHRL
MDIRIELIAR FRVDFLDLRS 101 IKCFLQLVQS HLHAHFQRIE IAALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IRNFLLVAAA QVLLVCQSAL LVFQLRFQLG
NPRLQILISR LCGSLFLHTV 201 RISYCFDGFH RLHIFNRFFT VLLLCLFAHI
VSLKTNWKSK SSYYPRKIRT 251 FSRNFXQXQR ISNSFSNPLP KK* m244-1/G244-1
86.3% identity in 277 aa overlap 10 20 30 40 50 60 m244-1.pep
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLRHRNHSRAQHAVGQRILL || |||
|||||||||||||||||||||||||||||||||| |||||||||:||| ||| g244-1
MPPEARPAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLPCHRNHSRAQHTVGQGILL 10 20
30 40 50 60 70 80 90 100 110 120 m244-1.pep
LHHTHHGIRLLFACHRLHRLMDIRIELIARFRVDFLDLRSIKCFLQLVQSHLHAHFQRIE
||||:||| :|:: ||||||||||||||||||:||||||:|| :|||:|||||:|||||| g244-1
LHHTNHGIGFLLTGHRLHRLMDIRIELIARFRIDFLDLRGIKRLLQLIQSHLHTHFQRIE 70 80
90 100 110 120 130 140 150 160 170 180 m244-1.pep
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSAALLVFQLRFQL
|:||||||||||||||||||||||||||||| ||||||||||||||||| |:|||||||| g244-1
ITALIQKRHFQIILDRQHFHGKLLSGELVRIGNFLLVAAAQVLLVCQSAQLFVFQLRFQL 130
140 150 160 170 180 190 200 210 220 230 240 m244-1.pep
GNPRLQILISRLCGSLFLHTVRISYCFDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS
|||||||||||| |||||:|||||||:||||||||||||||||||||||||||||||||| g244-1
GNPRLQILISRLGGSLFLYTVRISYCLDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS 190
200 210 220 230 240 250 260 270 m244-1.pep
KSSYYPRKIRTFSRNFXQXQRISNSFSNPLPKKX ||:||| ||||||||| | |:||: | ||:|
g244-1 KSGYYPSKIRTFSRNFKQRQEISHPPPNTLPQKPYKRX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 939>:
TABLE-US-01194 a244-1.seq 1 ATGCCGTCTG AAGCCCGACA GGCGGGTTCA
GACGGCATTG CCGCTTTACT 51 TCGATCGGTT TATACGCAAA ACGCGCTTCA
GGAAATAAAT CAGATTATTC 101 CCCAGACGCC TTCAGGCTTC CTTCTGTGCC
ACCGTAACCA TAGCCGGGCG 151 CAACACGCGG TCGGACAGCG TATAACCCTT
CTTCATCACG CCCACCACGG 201 TATTGGGTTC CTGTTCGCTT GCCACCGCCT
GCATCGCCTG ATGGATATTC 251 GGATCGAGCT TATCGCCCGC TTTAGGATTG
ATTTCCTTGA TTTGCGTAGC 301 ATCAAATGCT TTCTGCAACT CGTTCAAAGT
CATCTGCACG CCCATTTTCA 351 GCGCATCGAA ATTGCCGCTC TGATCCAAAA
GCGCCATTTC CAGATAATCC 401 TTGACCGGCA GCATTTCCAC GGCAAACTTC
TGTCCGGCGA ACTTGTGCGT 451 ATCCGCAATT TCCTGCTGGT GGCGGCGGCG
CAGGTTTTGC TCGTTTGCCA 501 AAGCGCGCAG CTGCTCGTCT TTCAACTGCG
CTTCCAGCTC GGCAATCCGC 551 GCCTGCAAAT CCTCATAAGC CGGCTCTGCG
GCAGCCTGTT CCTGCACACC 601 GTCCGCATTT CCTACTGTCT CGACGGTTTC
CACCGCCTCC ACATTTTCAA 651 CCGCTTCTTC ACTGTTTTGC TGCTGTGTCT
GTTCGCTCAT ATCGTATCCC 701 TTAAAACAAA TTGGAAATCA AAATCCAGTT
ATTACCCGCG CAAGATAAGG 751 ACATTTTCAA GAAACTTCAA GCAAAGGCAG
AGAATTTCAA ATTCATTTTC 801 AAATCCCCTA CCGAAAAAAT AA
This corresponds to the amino acid sequence <SEQ ID 940; ORF
244-1.a>:
TABLE-US-01195 a244-1.pep 1 MPSEARQAGS DGIAALLRSV YTQNALQEIN
QIIPQTPSGF LLCHRNHSRA 51 QHAVGQRITL LHHAHHGIGF LFACHRLHRL
MDIRIELIAR FRIDFLDLRS 101 IKCFLQLVQS HLHAHFQRIE IAALIQKRHF
QIILDRQHFH GKLLSGELVR 151 IRNFLLVAAA QVLLVCQSAQ LLVFQLRFQL
GNPRLQILIS RLCGSLFLHT 201 VRISYCLDGF HRLHIFNRFF TVLLLCLFAH
IVSLKTNWKS KSSYYPRKIR 251 TFSRNFKQRQ RISNSFSNPL PKK* m244-1/a244-1
96.8% identity in 274 aa overlap 10 20 30 40 50 60 m244-1.pep
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLRHRNHSRAQHAVGQRILL
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| a244-1
MPSEARQAGSDGIAALLRSVYTQNALQEINQIIPQTPSGFLLCHRNHSRAQHAVGQRILL 10 20
30 40 50 60 70 80 90 100 110 120 m244-1.pep
LHHTHHGIRLLFACHRLHRLMDIRIELIARFRVDFLDLRSIKCFLQLVQSHLHAHFQRIE
|||:|||| :||||||||||||||||||||||:||||||||||||||||||||||||||| a244-1
LHHAHHGIGFLFACHRLHRLMDIRIELIARFRIDFLDLRSIKCFLQLVQSHLHAHFQRIE 70 80
90 100 110 120 130 140 150 160 170 179 m244-1.pep
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSA-LLVFQLRFQL
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a244-1
IAALIQKRHFQIILDRQHFHGKLLSGELVRIRNFLLVAAAQVLLVCQSAQLLVFQLRFQL 130
140 150 160 170 180 180 190 200 210 220 230 239 m244-1.pep
GNPRLQILISRLCGSLFLHTVRISYCFDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a244-1
GNPRLQILISRLCGSLFLHTVRISYCLDGFHRLHIFNRFFTVLLLCLFAHIVSLKTNWKS 190
200 210 220 230 240 240 250 260 270 m244-1.pep
KSSYYPRKIRTFSRNFXQXQRISNSFSNPLPKKX |||||||||||||||| |
||||||||||||||| a244-1 KSSYYPRKIRTFSRNFKQRQRISNSFSNPLPKKX 250 260
270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 941>:
TABLE-US-01196 g246.seq 1 atgtacgggc ggaacggtag tactcaagcg
gccgttgcct tcgttttcga 51 ccagacacag cgtgcccgtt tcggcaacgg
cgaagtttac gccgctcaag 101 ccgacatcgg cagtgctgta aatatcgcgc
agggctttgc gggcgaatcc 151 ggtcagttgg tccacgtcgt ctgtaagcgg
tgtgccgagg ttttggtgga 201 acagttcgct gacctgttct ttggttttat
ggattgcggg catcacgata 251 tgggtcggtt tttcgcctgc catttggacg
ataaactcgc ccaagtcgct 301 ttccaccgcc ttaatgcctt ttgcttcaag
ataatggttc agctcgattt 351 cttcgctgac catggatttg cctttgacca
tcagcttgcc gtttttggct 401 gtgatgatgt cgtggataat ttggcaggct
tcggcagggg tttccgccca 451 gtgtactttc acgcccaact tagtcaggtt
ttcttccaac tgctccagca 501 gcgcgggtaa
This corresponds to the amino acid sequence <SEQ ID 942; ORF
246.ng>:
TABLE-US-01197 g246.pep 1 MYGRNGSTQA AVAFVFDQTQ RARFGNGEVY
AAQADIGSAV NIAQGFAGES 51 GQLVHVVCKR CAEVLVEQFA DLFFGFMDCG
HHDMGRFFAC HLDDKLAQVA 101 FHRLNAFCFK IMVQLDFFAD HGFAFDHQLA
VFGCDDVVDN LAGFGRGFRP 151 VYFHAQLSQV FFQLLQQRG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 943>:
TABLE-US-01198 m246.seq (partial) 1 ATGCACGGGC GGTACGGTGG
TACTCAAGCG ACCGTTgCTT CGTTTTCCAC 51 CAGACACAGC GTACCTGTTT
CAGCAACGGC AAAGTTTACG CCACTCAAAC 101 CGACATCGGC AGTGCTGTAA
ATATCGCGCA GTGCTTTACG GGCGAAGCCG 151 GTCAGTTGGT CTACATCGTC
TGTCAGCGGC GTACCGAGGT TTTGGTGGAA 201 CAGTTCGCTA ACCTGTTCTT
TGGTTTTGTG GATAGCAGGC ATCACGATAT 251 GGGTCGGTTT TTCGCCTGCC
ATTTGGACGA TGAACTCGCC CAAGTCGCTT 301 TCTACCGCTT TAATGCyTTT
TGCTTCAAGA TAATGrTTCA GCTCGATTTC 351 CTCGCTGACC ATCGATTTGC
CTTTGACCAT CAGCTTGCCG TTTTTGGCTG 401 TGATGATGTC GTGGATAATT
TGGCAGGCTT CGGTCGGGGT TTCTGCCCG...
This corresponds to the amino acid sequence <SEQ ID 944; ORF
246>:
TABLE-US-01199 m246.pep (partial) 1 MHGRYGGTQA TVAFVFHQTQ
RTCFSNGKVY ATQTDIGSAV NIAQCFTGEA 51 GQLVYIVCQR RTEVLVEQFA
NLFFGFVDSR HHDMGRFFAC HLDDELAQVA 101 FYRFNAFCFK IMXQLDFLAD
HRFAFDHQLA VFGCDDVVDN LAGFGRGFCP...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 246
shows 80.0% identity over a 150 aa overlap with a predicted ORF
(ORF 246.ng) from N. gonorrhoeae:
TABLE-US-01200 m246/g246 10 20 30 40 50 60 m246.pep
MHGRYGGTQATVAFVFHQTQRTCFSNGKVYATQTDIGSAVNIAQCFTGEAGQLVYIVCQR |:||
|:|||:||||| ||||: |:||:|||:|:|||||||||| |:||:||||::||:| g246
MYGRNGSTQAAVAFVFDQTQRARFGNGEVYAAQADIGSAVNIAQGFAGESGQLVHVVCKR 10 20
30 40 50 60 70 80 90 100 110 120 m246.pep
RTEVLVEQFANLFFGFVDSRHHDMGRFFACHLDDELAQVAFYRFNAFCFKIMXQLDFLAD
:||||||||:|||||:| ||||||||||||||:||||||:|:|||||||| ||||:|| g246
CAEVLVEQFADLFFGFMDCGHHDMGRFFACHLDDKLAQVAFHRLNAFCFKIMVQLDFFAD 70 80
90 100 110 120 130 140 150 m246.pep HRFAFDHQLAVFGCDDVVDNLAGFGRGFCP
| |||||||||||||||||||||||||| | g246
HGFAFDHQLAVFGCDDVVDNLAGFGRGFRPVYFHAQLSQVFFQLLQQRGX 130 140 150
160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 945>:
TABLE-US-01201 a246.seq (partial) 1 ATGCACGGGC GGAACGGTGG
TACTCAAGCG ACCGTTGCCT TCGTTTTCCA 51 CCAGACACAG CGTACCTGTT
TCAGCAACGG CGAAGTTCAC GCCACTCAAA 101 CCGACATCGG CAGTGCTGTA
AATATCGCGC AGTGCTTTAC GGGCGAAGCC 151 GGTCAGTTGG TCTACGTCGT
CCGTTAACGG TGTGCCGAGG TTTTGGTGGA 201 ACAGTTCGCT AACCTGTTCT
TTGGTTTTAT GGATTGCGGG CATCACGATA 251 TGGGTCGGTT TTTCACCTGC
CATTTGGACG ATGAACTCGC CCAAGTCGCT 301 TTCCACCGCT TTAATGCCTT
TTGCTTCAAG ATAATGGTTC AGCTCGATTT 351 CCTCGCTGAC CATCGATTTG
CCTTTGACCA TCAGCTTGCC GTTTTTGGCT 401 GTGATGATGT CGTGGATGAT
TTCGCAGGCT TCGGCCGGTG TTTCCGCCCA 451 GTGTACTTTT ACGCCCAACT
TGGTCAGGTT TTCTTCCAGC TGCTCCAGCA 501 G
This corresponds to the amino acid sequence <SEQ ID 946; ORF
246.a>:
TABLE-US-01202 a246.pep (partial) 1 MHGRNGGTQA TVAFVFHQTQ
RTCFSNGEVH ATQTDIGSAV NIAQCFTGEA 51 GQLVYVVR*R CAEVLVEQFA
NLFFGFMDCG HHDMGRFFTC HLDDELAQVA 101 FHRFNAFCFK IMVQLDFLAD
HRFAFDHQLA VFGCDDVVDD FAGFGRCFRP 151 VYFYAQLGQV FFQLLQQ m246/a246
88.0% identity in 150 aa overlap 10 20 30 40 50 60 m246.pep
MHGRYGGTQATVAFVFHQTQRTCFSNGKVYATQTDIGSAVNIAQCFTGEAGQLVYIVCQR ||||
||||||||||||||||||||||:|:|||||||||||||||||||||||||:| | a246
MHGRNGGTQATVAFVFHQTQRTCFSNGEVHATQTDIGSAVNIAQCFTGEAGQLVYVVRXR 10 20
30 40 50 60 70 80 90 100 110 120 m246.pep
RTEVLVEQFANLFFGFVDSRHHDMGRFFACHLDDELAQVAFYRFNAFCFKIMXQLDFLAD
:||||||||||||||:| ||||||||:||||||||||||:|||||||||| ||||||| a246
CAEVLVEQFANLFFGFMDCGHHDMGRFFTCHLDDELAQVAFHRFNAFCFKIMVQLDFLAD 70 80
90 100 110 120 130 140 150 m246.pep HRFAFDHQLAVFGCDDVVDNLAGFGRGFCP
|||||||||||||||||||::||||| | | a246
HRFAFDHQLAVFGCDDVVDDFAGFGRCFRPVYFYAQLGQVFFQLLQQ 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 947>:
TABLE-US-01203 g247.seq 1 atgaaacgta aaatgctaaa cgtaccaaag
ggcggttatg atggtatgaa 51 gggttttacc attgttgaat ttctggttgc
gggcctgctc agtataattg 101 tcctgatagc ggtcgtatcg agttacttta
catcccggaa attaaatgat 151 gtggcaaacg agcgtcttgc cattcaacag
gatttgcgga atgcggcaac 201 attaattgtc cgcgatgcaa gaatggcggg
gagcttcggt tgtttcaata 251 tgtccgagca tactaaagac gatattgttg
attcaagtaa tcaaactcaa 301 tctaaccttg caaaacccgg tgccaaacaa
gaaaatcccc ttttttcctt 351 aaaaaggagc ggcatggata aacaactgat
tcccgttgct gaatccatag 401 atattaaata tccgggtttt atccagcgcc
ttaacgcatt ggttttccaa 451 tacggtatcg atgatcttga tgcgagtgct
gagactgttg tagtcagcag 501 ctgttccaaa atagcaaaac cgggtaagaa
aatatctacc ttgcaagaag 551 caaagagtgc attacagatt actaatgatg
ataaacaaaa tggaaatatc 601 acccgtcaga aacatgtggt caatgcctat
gcggtcggca ggtttggcaa 651 taatgaggaa agtttgttcc gcttccaatt
ggatgataag ggcaagtggg 701 gtaatcctca gttgctcgtg aaaaaggtta
aacgtatgga tgtgcggtat 751 atttatgttt ccggttgtcc tgaagatgaa
gatgccggca aagaggaaaa 801 attcagatat acgaataaat tcgacaaatc
caaaaatgct gttacgcctg 851 ccggggtgga ggttttattg gatagcggcc
ttaatgccaa gattgccgct 901 tcttcagaca atagtattta tgcttaccgt
atcaatgcga caatacgcgg 951 gggaaatgta tgcgcaaaca gaacactttg a
This corresponds to the amino acid sequence <SEQ ID 948; ORF
247.ng>:
TABLE-US-01204 g247.pep 1 MKRKMLNVPK GGYDGMKGFT IVEFLVAGLL
SIIVLIAVVS SYFTSRKLND 51 VANERLAIQQ DLRNAATLIV RDARMAGSFG
CFNMSEHTKD DIVDSSNQTQ 101 SNLAKPGAKQ ENPLFSLKRS GMDKQLIPVA
ESIDIKYPGF IQRLNALVFQ 151 YGIDDLDASA ETVVVSSCSK IAKPGKKIST
LQEAKSALQI TNDDKQNGNI 201 TRQKHVVNAY AVGRFGNNEE SLFRFQLDDK
GKWGNPQLLV KKVKRMDVRY 251 IYVSGCPEDE DAGKEEKFRY TNKFDKSKNA
VTPAGVEVLL DSGLNAKIAA 301 SSDNSIYAYR INATIRGGNV CANRTL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 949>:
TABLE-US-01205 m247.seq (partial) 1 ATsAGACGTA AAATGCTAAA
CGTwsyArAA GGCAGTTATG ATGGTATGAA 51 AGGTTTTACC ATTATTGAAT
TTTTGGTTGC GGGCCTGCTC AGTATGATTG 101 TCCTGATGGC GGTCGGATCG
AGTTACTTCA CATCCCGGAA ATTAAATGAT 151 GCGGCAAACG AGCGTCTTGC
CGCGCAACAG GATTTGCGGA ATGCGGCAAC 201 ATTGATTGTC CGCGATGCGA
GAATGGCAGG CGGCTTCGGT TGTTTCAATA 251 TGTCCGAGCA TCCTGCAACT
GATGTTATTC CCGATACGAC GCAACAAAAT 301 TCTCCTTTTT CCTTAAAAAG
GAACGGTATA GATAAACTTA TTCCCATAGC 351 GGAATCTTCA AATATCAATT
ATCAGAATTT TTTCCAGGTT GGTAGCGCAT 401 TGATTTTTCA ATACGGAATC
GATGATGTTA ATGCAAGCAC CGCGACTACC 451 GTCGTCAGCA GCTGTGCCGC
AATATCGAAA CCGGGCAAGC AAATCCCTAC 501 TTTAGAAGAT GCAAAAAAAG
AATTGAAGAT TCCGGATCAG GATAAGGAGC 551 AAAATGGCAA TATAGCGCGT
CAAAGGCATG TGGTCAATGC CTATGCGGTC 601 GGCAGGATTG CCGATGAGGA
AAGTTTGTTC CGCTTCCAAT TGGATGATAA 651 GGGCAAGTGG GGTAATCCTC
AGTTGC...
This corresponds to the amino acid sequence <SEQ ID 950; ORF
247>:
TABLE-US-01206 m247.pep (partial) 1 XRRKMLNVXX GSYDGMKGFT
IIEFLVAGLL SMIVLMAVGS SYFTSRKLND 51 AANERLAAQQ DLRNAATLIV
RDARMAGGFG CFNMSEHPAT DVIPDTTQQN 101 SPFSLKRNGI DKLIPIAESS
NINYQNFFQV GSALIFQYGI DDVNASTATT 151 VVSSCAAISK PGKQIPTLED
AKKELKIPDQ DKEQNGNIAR QRHVVNAYAV 201 GRIADEESLF RFQLDDKGKW
GNPQL....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 247
shows 69.3% identity over a 238 aa overlap with a predicted ORF
(ORF 247.ng) from N. gonorrhoeae:
TABLE-US-01207 m247/g247 10 20 30 40 50 60 m247.pep
XRRKMLNVXXGSYDGMKGFTIIEFLVAGLLSMIVLMAVGSSYFTSRKLNDAANERLAAQQ
:|||||| |:|||||||||:|||||||||:|||:|| |||||||||||:|||||| || g247
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAIQQ 10 20
30 40 50 60 70 80 90 100 m247.pep
DLRNAATLIVRDARMAGGFGCFNMSEHPATDVI------------PDTTQQNSPFSLKRN
|||||||||||||||||:||||||||| |:: | : |:| |||||: g247
DLRNAATLIVRDARMAGSFGCFNMSEHTKDDIVDSSNQTQSNLAKPGAKQENPLFSLKRS 70 80
90 100 110 120 110 120 130 140 150 160 m247.pep
GIDK-LIPIAESSNINYQNFFQVGSALIFQYGIDDVNASTATTVVSSCAAISKPGKQIPT |:||
|||:||| :|:| :|:| :||:|||||||::||: |:|||||: |:||||:| | g247
GMDKQLIPVAESIDIKYPGFIQRLNALVFQYGIDDLDASAETVVVSSCSKIAKPGKKIST 130
140 150 160 170 180 170 180 190 200 210 220 m247.pep
LEDAKKELKIPDQDKEQNGNIARQRHVVNAYAVGRIAD-EESLFRFQLDDKGKWGNPQL |::||:
|:| ::|| |||||:||:||||||||||::: |||||||||||||||||||| g247
LQEAKSALQITNDDK-QNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLL 190
200 210 220 230 g247
VKKVKRMDVRYIYVSGCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIA 240
250 260 270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 951>:
TABLE-US-01208 a247.seq 1 ATGAGACGTA AAATGCTAAA CGTACCAAAA
GGCAATTATG ATGGTATGAA 51 GGGTTTTACC ATTATTGAAT TTTTGGTTGC
GGGCATGCTC AGTATGATTG 101 TCCTGATGGC GGTCGGATCG AGTTACTTCA
CATCCCGGAA ATTAAATGAT 151 GCGGCAAACG AGCGTCTTTC CGCGCAACAG
GATTTGCGGA ATGCGGCAAC 201 ATTGATTGTC CGCGATGCAA GAATGGCAGG
GGGCTTCGGT TGTTTCAATA 251 TGTCCGAGCA TACTAAAAAT GATATTATTG
TTGATCCAAG TAAGCAAACT 301 CAACATGTCC CTGTAAAACC CGGTGCCAAA
CAAGAAAATC CCCTTTTTTC 351 TTTAGAGTGG GCTAATACTA ATAATACTAA
TAATAATACA GCTAAATTGA 401 TTCCTATTGC TGAATCCACA GATATTAAAT
ATCCGGGTTT TGCCCAGGCT 451 CGTCCGGCAT TGATTTTCCA ATACGGCATC
GATGATCTTG ATGCGAGTGC 501 TGAGACTGTT GTAGTCAGCA GCTGTTCCAA
AATAGCAAAA CCGGGTAAGA 551 AAATATCTAC CTTGCAAGAA GCAAAGAGTG
CATTACAGAT TACTAATGAT 601 GATAAACAAA ATGGAAATAT CACCCGTCAA
AGGCATGTGG TCAATGCCTA 651 TGCGGTCGGC AGGATTGCCG GTGAGGAAGG
TTTGTTCCGC TTCCAATTGG 701 ATGATAAGGG CAAGTGGGGT AATCCTCAGT
TGCTCGTGAA AAAGATTAGA 751 CATATGAAAG TGCGGTATAT CTATGTTTCC
GACTGTCCTG AAGATGACGA 801 TGCCGGCAAA GAGGAAAAAT TCAAATATAC
GGGTACATTC GACAGCTCCA 851 CAAATGCTGT TACGCCCGCC GGGGTGGAGG
TTTTATTGAG TANCGGTACT 901 GATACCAAGA TTGCCGCTTC TTCAGACAAT
CATATTTATG CTTACCGTAT 951 CGATGCGACA ATACGCGGGG GAAATGTATG
CGCAAACAGA ACACTTTGA
This corresponds to the amino acid sequence <SEQ ID 952; ORF
247.a>:
TABLE-US-01209 a247.pep 1 MRRKMLNVPK GNYDGMKGFT IIEFLVAGML
SMIVLMAVGS SYFTSRKLND 51 AANERLSAQQ DLRNAATLIV RDARMAGGFG
CFNMSEHTKN DIIVDPSKQT 101 QHVPVKPGAK QENPLFSLEW ANTNNTNNNT
AKLIPIAEST DIKYPGFAQA 151 RPALIFQYGI DDLDASAETV VVSSCSKIAK
PGKKISTLQE AKSALQITND 201 DKQNGNITRQ RHVVNAYAVG RIAGEEGLFR
FQLDDKGKWG NPQLLVKKIR 251 HMKVRYIYVS DCPEDDDAGK EEKFKYTGTF
DSSTNAVTPA GVEVLLSXGT 301 DTKIAASSDN HIYAYRIDAT IRGGNVCANR TL*
m247/a247 70.9% identity in 244 aa overlap 10 20 30 40 50 60
m247.pep
XRRKMLNVXXGSYDGMKGFTIIEFLVAGLLSMIVLMAVGSSYFTSRKLNDAANERLAAQQ
||||||| |:||||||||||||||||:|||||||||||||||||||||||||||:||| a247
MRRKMLNVPKGNYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLSAQQ 10 20
30 40 50 60 70 80 90 100 m247.pep
DLRNAATLIVRDARMAGGFGCFNMSEHPATDVI-------------PDTTQQNSPFSLK-
||||||||||||||||||||||||||| :|:| | : |:| |||: a247
DLRNAATLIVRDARMAGGFGCFNMSEHTKNDIIVDPSKQTQHVPVKPGAKQENPLFSLEW 70 80
90 100 110 120 110 120 130 140 150 160 m247.pep
RNGIDKLIPIAESSNINYQNFFQVGSALIFQYGIDDVNASTATTVVSSCAAISK |:
||||||||::|:| :| |: ||||||||||::||: |:|||||: |:| a247
ANTNNTNNNTAKLIPIAESTDIKYPGFAQARPALIFQYGIDDLDASAETVVVSSCSKIAK 130
140 150 160 170 180 170 180 190 200 210 220 m247.pep
PGKQIPTLEDAKKELKIPDQDKEQNGNIARQRHVVNAYAVGRIADEESLFRFQLDDKGKW |||:|
||::||: |:| ::|| |||||:||||||||||||||| ||:|||||||||||| a247
PGKKISTLQEAKSALQITNDDK-QNGNITRQRHVVNAYAVGRIAGEEGLFRFQLDDKGKW 190
200 210 220 230 m247.pep GNPQL ||||| a247
GNPQLLVKKIRHMKVRYIYVSDCPEDDDAGKEEKFKYTGTFDSSTNAVTPAGVEVLLSXG 240
250 260 270 280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 953>:
TABLE-US-01210 g247-1.seq (partial) .. 1 CCCGGTGCCA AACAAGAAAA
TCCCCTTTTT TCCTTAAAAA GGAGCGGCAT 51 GGATAAACAA CTGATTCCCG
TTGCTGAATC CATAGATATT AAATATCCGG 101 GTTTTATCCA GCGCCTTAAC
GCATTGGTTT TCCAATACGG TATCGATGAT 151 CTTGATGCGA GTGCTGAGAC
TGTTGTAGTC AGCAGCTGTT CCAAAATAGC 201 AAAACCGGGT AAGAAAATAT
CTACCTTGCA AGAAGCAAAG AGTGCATTAC 251 AGATTACTAA TGATGATAAA
CAAAATGGAA ATATCACCCG TCAGAAACAT 301 GTGGTCAATG CCTATGCGGT
CGGCAGGTTT GGCAATAATG AGGAAAGTTT 351 GTTCCGCTTC CAATTGGATG
ATAAGGGCAA GTGGGGTAAT CCTCAGTTGC 401 TCGTGAAAAA GGTTAAACGT
ATGGATGTGC GGTATATTTA TGTTTCCGGT 451 TGTCCTGAAG ATGAAGATGC
CGGCAAAGAG GAAAAATTCA GATATACGAA 501 TAAATTCGAC AAATCCAAAA
ATGCTGTTAC GCCTGCCGGG GTGGAGGTTT 551 TATTGGATAG CGGCCTTAAT
GCCAAGATTG CCGCTTCTTC AGACAATAGT 601 ATTTATGCTT ACCGTATCAA
TGCGACAATA CGCGGGGGAA ATGTATGCGC 651 AAACAGAACA CTTTGA
This corresponds to the amino acid sequence <SEQ ID 954; ORF
247-1.ng>:
TABLE-US-01211 g247-1.pep (partial) .. 1 PGAKQENPLF SLKRSGMDKQ
LIPVAESIDI KYPGFIQRLN ALVFQYGIDD 51 LDASAETVVV SSCSKIAKPG
KKISTLQEAK SALQITNDDK QNGNITRQKH 101 VVNAYAVGRF GNNEESLFRF
QLDDKGKWGN PQLLVKKVKR MDVRYIYVSG 151 CPEDEDAGKE EKFRYTNKFD
KSKNAVTPAG VEVLLDSGLN AKIAASSDNS 201 IYAYRINATI RGGNVCANRT L*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 955>:
TABLE-US-01212 m247-1.seq 1 ATGAGACGTA AAATGCTAAA CGTACCAAAA
GGCAGTTATG ATGGTATGAA 51 AGGTTTTACC ATTATTGAAT TTTTGGTTGC
GGGCCTGCTC AGTATGATTG 101 TCCTGATGGC GGTCGGATCG AGTTACTTCA
CATCCCGGAA ATTAAATGAT 151 GCGGCAAACG AGCGTCTTGC CGCGCAACAG
GATTTGCGGA ATGCGGCAAC 201 ATTGATTGTC CGCGATGCGA GAATGGCAGG
CGGCTTCGGT TGTTTCAATA 251 TGTCCGAGCA TCCTGCAACT GATGTTATTC
CCGATACGAC GCAACAAAAT 301 TCTCCTTTTT CCTTAAAAAG GAACGGTATA
GATAAACTTA TTCCCATAGC 351 GGAATCTTCA AATATCAATT ATCAGAATTT
TTTCCAGGTT GGTAGCGCAT 401 TGATTTTTCA ATACGGAATC GATGATGTTA
ATGCAAGCAC CGCGACTACC 451 GTCGTCAGCA GCTGTGCCGC AATATCGAAA
CCGGGCAAGC AAATCCCTAC 501 TTTAGAAGAT GCAAAAAAAG AATTGAAGAT
TCCGGATCAG GATAAGGAGC 551 AAAATGGCAA TATAGCGCGT CAAAGGCATG
TGGTCAATGC CTATGCGGTC 601 GGCAGGATTG CCGATGAGGA AGGTTTGTTC
CGCTTCCAAT TGGATGATAA 651 GGGCAAGTGG GGTAATCCTC AGTTGCTCGT
GAAAAAGGTT AGACATATGA 701 AAGTGCGGTA TATCTATGTT TCCGGCTGTC
CTGAAGATGA CGATGCCGGC 751 AAAGAGGAAA CATTCAAATA TACGGATAAA
TTCGACAGCG CCCAAAATGC 801 TGTTACGCCC GCCGGGGTGG AGGTTTTATT
GAGTAGCGGT ACTGATACCA 851 AGATTGCCGC TTCTTCAGAC AATCATATTT
ATGCTTACCG TATCGATGCG 901 ACAATACGCG GGGGAAATGT ATGCGCAAAC
AGAACACTTT GA
This corresponds to the amino acid sequence <SEQ ID 956; ORF
247-1>:
TABLE-US-01213 m247-1.pep 1 MRRKMLNVPK GSYDGMKGFT IIEFLVAGLL
SMIVLMAVGS SYFTSRKLND 51 AANERLAAQQ DLRNAATLIV RDARMAGGFG
CFNMSEHPAT DVIPDTTQQN 101 SPFSLKRNGI DKLIPIAESS NINYQNFFQV
GSALIFQYGI DDVNASTATT 151 VVSSCAAISK PGKQIPTLED AKKELKIPDQ
DKEQNGNIAR QRHVVNAYAV 201 GRIADEEGLF RFQLDDKGKW GNPQLLVKKV
RHMKVRYIYV SGCPEDDDAG 251 KEETFKYTDK FDSAQNAVTP AGVEVLLSSG
TDTKIAASSD NHIYAYRIDA 301 TIRGGNVCAN RTL* m247-1/g247-1 72.1%
identity in 222 aa overlap 70 80 90 100 110 120 m247-1.pep
NAATLIVRDARMAGGFGCFNMSEHPATDVIPDTTQQNSPFSLKRNGIDK-LIPIAESSNI | :
|:| |||||:|:|| |||:||| :| g247-1 PGAKQENPLFSLKRSGMDKQLIPVAESIDI 10
20 30 130 140 150 160 170 180 m247-1.pep
NYQNFFQVGSALIFQYGIDDVNASTATTVVSSCAAISKPGKQIPTLEDAKKELKIPDQDK :|
:|:| :||:|||||||::||: |:|||||: |:||||:| ||::||: |:| ::|| g247-1
KYPGFIQRLNALVFQYGIDDLDASAETVVVSSCSKIAKPGKKISTLQEAKSALQITNDDK 40 50
60 70 80 90 190 200 210 220 230 240 m247-1.pep
EQNGNIARQRHVVNAYAVGRIAD-EEGLFRFQLDDKGKWGNPQLLVKKVRHMKVRYIYVS
|||||:||:||||||||||::: ||:||||||||||||||||||||||::| ||||||| g247-1
-QNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLLVKKVKRMDVRYIYVS 100
110 120 130 140 250 260 270 280 290 300 m247-1.pep
GCPEDDDAGKEETFKYTDKFDSAQNAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDAT
|||||:|||||| |:||:|||:::||||||||||||:|| ::|||||||| ||||||:|| g247-1
GCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINAT 150
160 170 180 190 200 310 m247-1.pep IRGGNVCANRTLX |||||||||||||
g247-1 IRGGNVCANRTLX 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 957>:
TABLE-US-01214 a247-1.seq (partial) 1 AATAATACAG CTAAATTGAT
TCCTATTGCT GAATCCACAG ATATTAAATA 51 TCCGGGTTTT GCCCAGGCTC
GTCCGGCATT GATTTTCCAA TACGGCATCG 101 ATGATCTTGA TGCGAGTGCT
GAGACTGTTG TAGTCAGCAG CTGTTCCAAA 151 ATAGCAAAAC CGGGTAAGAA
AATATCTACC TTGCAAGAAG CAAAGAGTGC 201 ATTACAGATT ACTAATGATG
ATAAACAAAA TGGAAATATC ACCCGTCAAA 251 GGCATGTGGT CAATGCCTAT
GCGGTCGGCA GGATTGCCGG TGAGGAAGGT 301 TTGTTCCGCT TCCAATTGGA
TGATAAGGGC AAGTGGGGTA ATCCTCAGTT 351 GCTCGTGAAA AAGATTAGAC
ATATGAAAGT GCGGTATATC TATGTTTCCG 401 ACTGTCCTGA AGATGACGAT
GCCGGCAAAG AGGAAAAATT CAAATATACG 451 GGTACATTCG ACAGCTCCAC
AAATGCTGTT ACGCCCGCCG GGGTGGAGGT 501 TTTATTGAGT AGCGGTACTG
ATACCAAGAT TGCCGCTTCT TCAGACAATC 551 ATATTTATGC TTACCGTATC
GATGCGACAA TACGCGGGGG AAATGTATGC 601 GCAAACAGAA CACTTTGA
This corresponds to the amino acid sequence <SEQ ID 958; ORF
247-1.a>:
TABLE-US-01215 a247-1.pep (partial) .. 1 NNTAKLIPIA ESTDIKYPGF
AQARPALIFQ YGIDDLDASA ETVVVSSCSK 51 IAKPGKKIST LQEAKSALQI
TNDDKQNGNI TRQRHVVNAY AVGRIAGEEG 101 LFRFQLDDKG KWGNPQLLVK
KIRHMKVRYI YVSDCPEDDD AGKEEKFKYT 151 GTFDSSTNAV TPAGVEVLLS
SGTDTKIAAS SDNHIYAYRI DATIRGGNVC 201 ANRTL* m247-1/a247-1 80.6%
identity in 206 aa overlap 10 20 30 a247-1.pep
NNTAKLIPIAESTDIKYPGFAQARPALIFQ |: ||||||||::|:| :| |: ||||| m247-1
GFGCFNMSEHPATDVIPDTTQQNSPFSLKRNGIDKLIPIAESSNINYQNFFQVGSALIFQ 80 90
100 110 120 130 40 50 60 70 80 89 a247-1.pep
YGIDDLDASAETVVVSSCSKIAKPGKKISTLQEAKSALQITNDDK-QNGNITRQRHVVNA
|||||::||: |:|||||: |:||||:| ||::||: |:| ::|| |||||:|||||||| m247-1
YGIDDVNASTATTVVSSCAAISKPGKQIPTLEDAKKELKIPDQDKEQNGNIARQRHVVNA 140
150 160 170 180 190 90 100 110 120 130 140 149 a247-1.pep
YAVGRIAGEEGLFRFQLDDKGKWGNPQLLVKKIRHMKVRYIYVSDCPEDDDAGKEEKFKY
||||||| ||||||||||||||||||||||||:||||||||||| ||||||||||| ||| m247-1
YAVGRIADEEGLFRFQLDDKGKWGNPQLLVKKVRHMKVRYIYVSGCPEDDDAGKEETFKY 200
210 220 230 240 250 150 160 170 180 190 200 a247-1.pep
TGTFDSSTNAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTLX | |||:
||||||||||||||||||||||||||||||||||||||||||||||||| m247-1
TDKFDSAQNAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTLX 260 270
280 290 300 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 959>:
TABLE-US-01216 g248.seq 1 atgcgcaaac agaacacttt gacaggaatc
ccgacttctg acggacagag 51 ggggtccgca ctgtttatcg tgctgatggt
gatgatagtc gtggcctttt 101 tggttgtaac tgccgcccag tcctacaata
ccgaacagag gatcagtgcc 151 aacgaatcag acaggaaatt ggctttgtct
ttagccgagg cggctttgcg 201 ggagggcgaa tttcaggttt tggatttgga
atatgctgcg gacagtaagg 251 ttacgtttag cgaaaactgt gaaaaaggtc
tgtgtaccgc agtgaatgtg 301 cggacaaata ataatggtag tgaagaggct
tttggcaata tcgtggtgca 351 aggcaagccc gccgttgagg cggtgaaacg
ttcttgccct gcaaagtctg 401 gcaaaaattc taccgacctg tgcattgaca
ataaagggat ggaatataat 451 aaaggcgcgg caggcgtcag caaaatgccg
cgctatatta tcgaatattt 501 aggcgtgaag aacggacaaa atgtttatcg
ggttactgcc aaggcttggg 551 gtaagaatgc caataccgtg gtcgtccttc
aatcttatgt aggcaataat 601 gatgagcaat aa
This corresponds to the amino acid sequence <SEQ ID 960; ORF
248.ng>:
TABLE-US-01217 g248.pep 1 MRKQNTLTGI PTSDGQRGSA LFIVLMVMIV
VAFLVVTAAQ SYNTEQRISA 51 NESDRKLALS LAEAALREGE FQVLDLEYAA
DSKVTFSENC EKGLCTAVNV 101 RTNNNGSEEA FGNIVVQGKP AVEAVKRSCP
AKSGKNSTDL CIDNKGMEYN 151 KGAAGVSKMP RYIIEYLGVK NGQNVYRVTA
KAWGKNANTV VVLQSYVGNN 201 DEQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 961>:
TABLE-US-01218 m248.seq (partial) 1 ..GGGTTTGCAC TGTTAATCGT
GCTGATGGTG ATrATCGTCG TGGCT.TywT 51 gGwTGTAACT GCCGCGCAGT
CTTACAATAC cGAGCAGCGk ATCAGTkCCA 101 ACGAATCAGA CAGGAAATTG
GCTwTGTCTT TGGCCGAGkC GkCTwTGCGG 151 GAAGGCGAAC TTCAGGTTTT
GGATTTGGAA TATGATACGG ACAGTAAGGT 201 TACATTTAGC GAAAACTGTG
GAAAAGGTCT GTsTGCCGCA GTGAATGTGC 251 GGACAAATAA TGATAATGAA
GAGGCTTTTG ACAATATCGT GGTGCAAGGC 301 AAGCCCACCG TTGAGGCGGT
GAAGCGTTCT TGCCCTGCAA ATTCTACCGA 351 CCTGTGCATT GACAAGAAAG
GGwTGGAATA TAAGAAAGGC ACGAGAAGCG 401 TCAc.AAAAT GCCACGTTAT
ATTATCGAAT ATTTGGGCGT GwAGAACGGA 451 GAAAATGTTT ATCGGGTTAC
TGCCAAGGCT TGGGGtAAGA ATGCCAATAC 501 CGTGGTCGTC CTTCAATCTT
ATGTAAGCAA TAATGATGAG TAA
This corresponds to the amino acid sequence <SEQ ID 962; ORF
248>:
TABLE-US-01219 m248.pep (partial) 1 ..GFALLIVLMV XIVVAFXXVT
AAQSYNTEQR ISXNESDRKL AXSLAEXXXR 51 EGELQVLDLE YDTDSKVTFS
ENCGKGLXAA VNVRTNNDNE EAFDNIVVQG 101 KPTVEAVKRS CPANSTDLCI
DKKGXEYKKG TRSVTKMPRY IIEYLGVXNG 151 ENVYRVTAKA WGKNANTVVV
LQSYVSNNDE *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 248
shows 81.1% identity over a 185 aa overlap with a predicted ORF
(ORF 248.ng) from N. gonorrhoeae:
TABLE-US-01220 m248/g248 10 20 30 40 m248.pep
GFALLIVLMVXIVVAFXXVTAAQSYNTEQRISXNESDRKLAXS | ||:||||| |||||
|||||||||||||| |||||||| | g248
MRKQNTLTGIPTSDGQRGSALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS 10 20
30 40 50 60 50 60 70 80 90 100 m248.pep
LAEXXXREGELQVLDLEYDTDSKVTFSENCGKGLXAAVNVRTNND-NEEAFDNIVVQGKP |||
||||:||||||| :|||||||||| ||| :||||||||: :|||| |||||||| g248
LAEAALREGEFQVLDLEYAADSKVTFSENCEKGLCTAVNVRTNNNGSEEAFGNIVVQGKP 70 80
90 100 110 120 110 120 130 140 150 m248.pep
TVEAVKRSCPA----NSTDLCIDKKGXEYKKGTRSVTKMPRYIIEYLGVXNGENVYRVTA
:|||||||||| ||||||||:|| ||:||: :|:|||||||||||| ||:||||||| g248
AVEAVKRSCPAKSGKNSTDLCIDNKGMEYNKGAAGVSKMPRYIIEYLGVKNGQNVYRVTA 130
140 150 160 170 180 160 170 180 m248.pep KAWGKNANTVVVLQSYVSNNDEX
|||||||||||||||||:|||| g248 KAWGKNANTVVVLQSYVGNNDEQX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 963>:
TABLE-US-01221 a248.seq 1 ATGCGCAAAC AGAACACTTT GACGGGAATC
CCGACTTCTG ACGGACAGAG 51 GGGGTTTGCA CTGTTTATCG TGCTGATGGT
GATGATCGTC GTGGCTTTTT 101 TGGTTGTAAC TGCCGCGCAG TCTTACAATA
CCGAGCAGCG GATCAGTGCC 151 AACGAATCAG ACAGGAAATT GGCTTTGTCT
TTGGCCGAGG CGGCTTTGCG 201 GGAAGGCGAA CTTCAGGTTT TGGATTTGGA
ATATGATACG GACAGTAAGG 251 TTACATTTAG CGAAAACTGT GGAAAAGGTC
TGTGTACCGC AGTGAATGTG 301 CGGACAAATA ATGATAATGA AGAGGCTTTT
GACAATATCG TGGTGCAAGG 351 CAAGCCCACC GTTGAGGCGG TGAAGCGTTC
TTGCACTGCA AAATCTACAG 401 GCCTGTGCAT TGACAATAAA GGGATGGAAT
ATAAGAAAGG CACGCAAAGC 451 GTCAGCAAAA TGCCACGTTA TATTATCGAA
TATTTGGGCG TGAAGAACGG 501 AGAAAATGTT TATCGGGTTA CTGCCAAGGC
TTGGGGTAAG AATGCCAATA 551 CCGTGGTCGT CCTTCAATCT TATGTAAGCA
ATAATGATGA GTAA
This corresponds to the amino acid sequence <SEQ ID 964; ORF
248.a>:
TABLE-US-01222 a248.pep 1 MRKQNTLTGI PTSDGQRGFA LFIVLMVMIV
VAFLVVTAAQ SYNTEQRISA 51 NESDRKLALS LAEAALREGE LQVLDLEYDT
DSKVTFSENC GKGLCTAVNV 101 RTNNDNEEAF DNIVVQGKPT VEAVKRSCTA
KSTGLCIDNK GMEYKKGTQS 151 VSKMPRYIIE YLGVKNGENV YRVTAKAWGK
NANTVVVLQS YVSNNDE*
m248/a248 89.4% identity in 180 aa overlap
TABLE-US-01223 10 20 30 40 m248.pep
GFALLIVLMVXIVVAFXXVTAAQSYNTEQRISXNESDRKLAXS ||||:||||| |||||
|||||||||||||| |||||||| | a248
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS 10 20
30 40 50 60 50 60 70 80 90 100 m248.pep
LAEXXXREGELQVLDLEYDTDSKVTFSENCGKGLXAAVNVRTNNDNEEAFDNIVVQGKPT |||
|||||||||||||||||||||||||||| :|||||||||||||||||||||||| a248
LAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPT 70 80
90 100 110 120 110 120 130 140 150 160 m248.pep
VEAVKRSCPANSTDLCIDKKGXEYKKGTRSVTKMPRYIIEYLGVXNGENVYRVTAKAWGK
|||||||| |:|| ||||:|| ||||||:||:|||||||||||| ||||||||||||||| a248
VEAVKRSCTAKSTGLCIDNKGMEYKKGTQSVSKMPRYIIEYLGVKNGENVYRVTAKAWGK 130
140 150 160 170 180 170 180 m248.pep NANTVVVLQSYVSNNDEX
|||||||||||||||||| a248 NANTVVVLQSYVSNNDEX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 965>:
TABLE-US-01224 m248-1.seq 1 ATGCGCAAAC AGAACACTTT GACGGGAATC
CCGACTTCTG ACGGACAGAG 51 GGGGTTTGCA CTGTTTATCG TGCTGATGGT
GATGATCGTC GTGGCTTTTT 101 TGGTTGTAAC TGCCGCGCAG TCTTACAATA
CCGAGCAGCG GATCAGTGCC 151 AACGAATCAG ACAGGAAATT GGCTTTGTCT
TTGGCCGAGG CGGCTTTGCG 201 GGAAGGCGAA CTTCAGGTTT TGGATTTGGA
ATATGATACG GACAGTAAGG 251 TTACATTTAG CGAAAACTGT GGAAAAGGTC
TGTGTGCCGC AGTGAATGTG 301 CGGACAAATA ATGATAATGA AGAGGCTTTT
GACAATATCG TGGTGCAAGG 351 CAAGCCCACC GTTGAGGCGG TGAAGCGTTC
TTGCCCTGCA AATTCTACCG 401 ACCTGTGCAT TGACAAGAAA GGGATGGAAT
ATAAGAAAGG CACGAGAAGC 451 GTCAGCAAAA TGCCACGTTA TATTATCGAA
TATTTGGGCG TGAAGAACGG 501 AGAAAATGTT TATCGGGTTA CTGCCAAGGC
TTGGGGTAAG AATGCCAATA 551 CCGTGGTCGT CCTTCAATCT TATGTAAGCA
ATAATGATGA GTAA
This corresponds to the amino acid sequence <SEQ ID 966; ORF
248-1>:
TABLE-US-01225 m248-1.pep 1 MRKQNTLTGI PTSDGQRGFA LFIVLMVMIV
VAFLVVTAAQ SYNTEQRISA 51 NESDRKLALS LAEAALREGE LQVLDLEYDT
DSKVTFSENC GKGLCAAVNV 101 RTNNDNEEAF DNIVVQGKPT VEAVKRSCPA
NSTDLCIDKK GMEYKKGTRS 151 VSKMPRYIIE YLGVKNGENV YRVTAKAWGK
NANTVVVLQS YVSNNDE* m248-1/g248 89.1% identity in 202 aa overlap 10
20 30 40 50 60 m248-1.pep
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g248
MRKQNTLTGIPTSDGQRGSALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS 10 20
30 40 50 60 70 80 90 100 110 119 m248-1.pep
LAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCAAVNVRTNND-NEEAFDNIVVQGKP
||||||||||:||||||| :|||||||||| ||||:||||||||: :|||| |||||||| g248
LAEAALREGEFQVLDLEYAADSKVTFSENCEKGLCTAVNVRTNNNGSEEAFGNIVVQGKP 70 80
90 100 110 120 120 130 140 150 160 170 m248-1.pep
TVEAVKRSCPA----NSTDLCIDKKGMEYKKGTRSVSKMPRYIIEYLGVKNGENVYRVTA
:|||||||||| ||||||||:|||||:||: :|||||||||||||||||:||||||| g248
AVEAVKRSCPAKSGKNSTDLCIDNKGMEYNKGAAGVSKMPRYIIEYLGVKNGQNVYRVTA 130
140 150 160 170 180 180 190 m248-1.pep KAWGKNANTVVVLQSYVSNNDEX
|||||||||||||||||:|||| g248 KAWGKNANTVVVLQSYVGNNDEQX 190 200
m248-1/a248 97.0% identity in 197 aa overlap 10 20 30 40 50 60
m248-1.pep
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a248
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALS 10 20
30 40 50 60 70 80 90 100 110 120 m248-1.pep
LAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCAAVNVRTNNDNEEAFDNIVVQGKPT
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a248
LAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRTNNDNEEAFDNIVVQGKPT 70 80
90 100 110 120 130 140 150 160 170 180 m248-1.pep
VEAVKRSCPANSTDLCIDKKGMEYKKGTRSVSKMPRYIIEYLGVKNGENVYRVTAKAWGK
|||||||| |:|| ||||:|||||||||:||||||||||||||||||||||||||||||| a248
VEAVKRSCTAKSTGLCIDNKGMEYKKGTQSVSKMPRYIIEYLGVKNGENVYRVTAKAWGK 130
140 150 160 170 180 190 m248-1.pep NANTVVVLQSYVSNNDEX
|||||||||||||||||| a248 NANTVVVLQSYVSNNDEX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 967>:
TABLE-US-01226 g249.seq 1 atgaagaata atgattgctt gcgcctgaaa
aatccccagt ccggtatggc 51 gttgatagaa gtcttggtcg ctatgctcgt
tctgaccatc ggtattttgg 101 cattgctgtc cgtacagttg cggacagtcg
cttccgtcag ggaggcggaa 151 acgcaaacca tcgtcagcca aatcacgcaa
aacctgatgg aaggaatgtt 201 gatgaatccg accattgatt tggacagcaa
caagaaaaac tatagtcttt 251 acatgggaaa acagacacta tcagctgtgg
atggtgagtt tatgcttgat 301 gccgagaaaa gtaaggcgca gttggcagag
gaacaattga agagatttag 351 tcatgagctg aaaaatgcct tgccggatgc
ggtagctatt cattacgccg 401 tctgcaagga ttcgtcgggt gacgcgccga
cattgtccga cagcggtgct 451 ttttcttcaa attgcgacaa taaggcaaac
ggggatactt tgattaaagt 501 attgtgggta aatgattcgg caggggattc
ggatatttcc cgtacgaatc 551 ttgaagtgag cggcgacaat atcgtatata
cctatcaggc aagggtcgga 601 ggtcgtgaat ga
This corresponds to the amino acid sequence <SEQ ID 968; ORF
249.ng>:
TABLE-US-01227 g249.pep 1 MKNNDCLRLK NPQSGMALIE VLVAMLVLTI
GILALLSVQL RTVASVREAE 51 TQTIVSQITQ NLMEGMLMNP TIDLDSNKKN
YSLYMGKQTL SAVDGEFMLD 101 AEKSKAQLAE EQLKRFSHEL KNALPDAVAI
HYAVCKDSSG DAPTLSDSGA 151 FSSNCDNKAN GDTLIKVLWV NDSAGDSDIS
RTNLEVSGDN IVYTYQARVG 201 GRE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 969>:
TABLE-US-01228 m249.seq 1 ATGAAGAATA ATGATTGCTT CCGCCTGAAA
GATTCCCAGT CCGGTATGGC 51 GCTGATAGAA GTCTTGGTTG CTATGCTCGT
TCTGACCATC GGTATTTTGG 101 CACTATTGTC TGTACAGTTG CGGACAGTCN
NNNNNNNNNN NNNNNNNNNN 151 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
NNNTTGATGG AGGGAATGTT 201 GATGAATCCG ACCATTGATT CGGACAGCAA
CAAGAAAAAC TATAATCTTT 251 ACATGGGAAA CCATACACTA TCAGCTGTGG
ATGGCGATTT TGCGATTGAT 301 GCCATGAAAA CTAAGGGGCA ATTGGCAGAG
GCACAATTGA AGAGATTTAG 351 TTATGAGCTG AAAAATGCCT TGCCGGATGC
GGCAGCCATC CATTACGCCG 401 TCTGCAAGGA TTCGTCGGGT AACGCGCCGA
CATTGTCCGG CAATGCTTTT 451 TCTTCAAATT GCGACAATAA GGCAAACGGG
GATACTTTAA TTAAAGTATT 501 GTGGGTAAAT GATTCGGCAG GGGATTCGGA
TATTTCCCGT ACGAATCTTG 551 AGGTGAGCGG CGACAATATC GTATATACTT
ATCAGGCAAG GGTCGGAGGT 601 CGGGAATGA
This corresponds to the amino acid sequence <SEQ ID 970; ORF
249>:
TABLE-US-01229 m249.pep 1 MKNNDCFRLK DSQSGMALIE VLVAMLVLTI
GILALLSVQL RTVXXXXXXX 51 XXXXXXXXXX XLMEGMLMNP TIDSDSNKKN
YNLYMGNHTL SAVDGDFAID 101 AMKTKGQLAE AQLKRFSYEL KNALPDAAAI
HYAVCKDSSG NAPTLSGNAF 151 SSNCDNKANG DTLIKVLWVN DSAGDSDISR
TNLEVSGDNI VYTYQARVGG 201 RE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 249
shows 81.3% identity over a 203 aa overlap with a predicted ORF
(ORF 249.ng) from N. gonorrhoeae:
TABLE-US-01230 m249/g249 10 20 30 40 50 60 m249.pep
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVXXXXXXXXXXXXXXXXX
||||||:|||: ||||||||||||||||||||||||||||||| : : : g249
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ 10 20
30 40 50 60 70 80 90 100 110 120 m249.pep
XLMEGMLMNPTIDSDSNKKNYNLYMGNHTLSAVDGDFAIDAMKTKGQLAEAQLKRFSYEL
|||||||||||| |||||||:||||::|||||||:| :|| |:|:|||| ||||||:|| g249
NLMEGMLMNPTIDLDSNKKNYSLYMGKQTLSAVDGEFMLDAEKSKAQLAEEQLKRFSHEL 70 80
90 100 110 120 130 140 150 160 170 179 m249.pep
KNALPDAAAIHYAVCKDSSGNAPTLSGN-AFSSNCDNKANGDTLIKVLWVNDSAGDSDIS
|||||||:||||||||||||:||||| : ||||||||||||||||||||||||||||||| g249
KNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKANGDTLIKVLWVNDSAGDSDIS 130
140 150 160 170 180 180 190 200 m249.pep RTNLEVSGDNIVYTYQARVGGREX
|||||||||||||||||||||||| g249 RTNLEVSGDNIVYTYQARVGGREX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 971>:
TABLE-US-01231 a249.seq 1 ATGAAGAATA ATGATTGCTT CCGCCTGAAA
AACCCCCAGT CCGGTATGGC 51 GCTGATAGAA GTCTTGGTCG CTATGCTCGT
TCTGACCATC GGTATTTTGG 101 CACTATTGTC TGTTCAGTTG CGGACAGTCG
CTTCCGTCAG GGAGGCAGAG 151 ACGCAAACCA TCGTCAGTCA AATCACGCAA
AACCTGATGG AAGGAATGTT 201 GATGAATCCG ACCATTGATT CGGACAGCAA
CAAGAAAAAC TATAATCTTT 251 ACATGGGAAA CCATCATGCA CTATCAGTTG
TGGATGGCGA TTTTCAGGTT 301 GATGCCATAA AAACTAAGAC GCAGTTGGCA
GAGGCACAAT TGAAGAGATT 351 TAGTTATGAG CTGAAAAATG CCTTGCCGGA
TGCGGCAGCC ATCCATTACG 401 CCGTCTGCAA GGATTCGTCG GGTGTTGCGC
CGACATTGTC CGCCGGCAGT 451 ACTTTTTCTT CAAATTGCGA TGGTAGTGCA
AATGGGGATA CTTTGATTAA 501 AGTATTGTGG GTAAATGATT CGGCAGGGGA
TTCGGATATC GCCCGTACGA 551 ATCTTGAGAC GAACGGCAAC AATATCGTAT
ATACCTATCA GGCAAGGGTC 601 GGAGGTCGGG AATGA
This corresponds to the amino acid sequence <SEQ ID 972; ORF
249.a>:
TABLE-US-01232 a249.pep 1 MKNNDCFRLK NPQSGMALIE VLVAMLVLTI
GILALLSVQL RTVASVREAE 51 TQTIVSQITQ NLMEGMLMNP TIDSDSNKKN
YNLYMGNHHA LSVVDGDFQV 101 DAIKTKTQLA EAQLKRFSYE LKNALPDAAA
IHYAVCKDSS GVAPTLSAGS 151 TFSSNCDGSA NGDTLIKVLW VNDSAGDSDI
ARTNLETNGN NIVYTYQARV 201 GGRE* m249/a249 81.9% identity in 204 aa
overlap 10 20 30 40 50 60 m249.pep
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVXXXXXXXXXXXXXXXXX
||||||||||: ||||||||||||||||||||||||||||||| : : : a249
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ 10 20
30 40 50 60 70 80 90 100 110 119 m249.pep
XLMEGMLMNPTIDSDSNKKNYNLYMGNH-TLSAVDGDFAIDAMKTKGQLAEAQLKRFSYE
||||||||||||||||||||||||||| :||:||||| :||:||| ||||||||||||| a249
NLMEGMLMNPTIDSDSNKKNYNLYMGNHHALSVVDGDFQVDAIKTKTQLAEAQLKRFSYE 70 80
90 100 110 120 120 130 140 150 160 170 m249.pep
LKNALPDAAAIHYAVCKDSSGNAPTLS-GNAFSSNCDNKANGDTLIKVLWVNDSAGDSDI
||||||||||||||||||||| ||||| |::||||||::||||||||||||||||||||| a249
LKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDGSANGDTLIKVLWVNDSAGDSDI 130
140 150 160 170 180 180 190 200 m249.pep SRTNLEVSGDNIVYTYQARVGGREX
:|||||::|:||||||||||||||| a249 ARTNLETNGNNIVYTYQARVGGREX 190
200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 973>:
TABLE-US-01233 m249-1.seq 1 ATGAAGAATA ATGATTGCTT CCGCCTGAAA
GATTCCCAGT CCGGTATGGC 51 GCTGATAGAA GTCTTGGTTG CTATGCTCGT
TCTGACCATC GGTATTTTGG 101 CACTATTGTC TGTACAGTTG CGGACAGTCG
CTTCCGTCAG GGAGGCGGAG 151 ACACAAACCA TCGTCAGCCA AATCACGCAA
AACCTGATGG AGGGAATGTT 201 GATGAATCCG ACCATTGATT CGGACAGCAA
CAAGAAAAAC TATAATCTTT 251 ACATGGGAAA CCATACACTA TCAGCTGTGG
ATGGCGATTT TGCGATTGAT 301 GCCATGAAAA CTAAGGGGCA ATTGGCAGAG
GCACAATTGA AGAGATTTAG 351 TTATGAGCTG AAAAATGCCT TGCCGGATGC
GGCAGCCATC CATTACGCCG 401 TCTGCAAGGA TTCGTCGGGT AACGCGCCGA
CATTGTCCGG CAATGCTTTT 451 TCTTCAAATT GCGACAATAA GGCAAACGGG
GATACTTTAA TTAAAGTATT 501 GTGGGTAAAT GATTCGGCAG GGGATTCGGA
TATTTCCCGT ACGAATCTTG 551 AGGTGAGCGG CGACAATATC GTATATACTT
ATCAGGCAAG GGTCGGAGGT 601 CGGGAATGA
This corresponds to the amino acid sequence <SEQ ID 974; ORF
249-1>:
TABLE-US-01234 m249-1.pep 1 MKNNDCFRLK DSQSGMALIE VLVAMLVLTI
GILALLSVQL RTVASVREAE 51 TQTIVSQITQ NLMEGMLMNP TIDSDSNKKN
YNLYMGNHTL SAVDGDFAID 101 AMKTKGQLAE AQLKRFSYEL KNALPDAAAI
HYAVCKDSSG NAPTLSGNAF 151 SSNCDNKANG DTLIKVLWVN DSAGDSDISR
TNLEVSGDNI VYTYQARVGG 201 RE* m249-1/g249 90.1% identity in 203 aa
overlap 10 20 30 40 50 60 m249-1.pep
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ
||||||:|||: |||||||||||||||||||||||||||||||||||||||||||||||| g249
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ 10 20
30 40 50 60 70 80 90 100 110 120 m249-1.pep
NLMEGMLMNPTIDSDSNKKNYNLYMGNHTLSAVDGDFAIDAMKTKGQLAEAQLKRFSYEL
||||||||||||| |||||||:||||::|||||||:| :|| |:|:|||| ||||||:|| g249
NLMEGMLMNPTIDLDSNKKNYSLYMGKQTLSAVDGEFMLDAEKSKAQLAEEQLKRFSHEL 70 80
90 100 110 120 130 140 150 160 170 179 m249-1.pep
KNALPDAAAIHYAVCKDSSGNAPTLSGN-AFSSNCDNKANGDTLIKVLWVNDSAGDSDIS
|||||||:||||||||||||:||||| : ||||||||||||||||||||||||||||||| g249
KNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKANGDTLIKVLWVNDSAGDSDIS 130
140 150 160 170 180 180 190 200 m249-1.pep RTNLEVSGDNIVYTYQARVGGREX
|||||||||||||||||||||||| g249 RTNLEVSGDNIVYTYQARVGGREX 190 200
a249/L36117 gi|643582 (L36117) prepilin leader sequence requires
cleavage to be active [Pseudomonas aeruginosa] >gi|1161222
(L48934) involved in type 4 fimbrial biogenesis; contains pre-pilin
like leader sequence [Pseudomonas aeruginosa] >gi|1246299
(L76605) reference L36117, L48934 [Pseudomonas aeruginosa] Length =
185 Score = 50.4 bits (118), Expect = 9e-06 Identities = 45/183
(24%), Positives = 84/183 (45%), Gaps = 26/183 (14%) Query: 13
QSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTI 72 QSG
++IEVLVA+L+++IG+L ++++Q +T+ ++ + + + NL+E M +P Sbjct: 12
QSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKA 71
Query: 73
DSDSNKKNYNLYMGNHHALSVVDGDFQVDAIKTKTQLAEA---QLKRFSYELKNALPDAA 129 D
+ M G A + T L +A +L ++ ++KN LP A Sbjct: 72
LYDVKDQ-----MATQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAG 126
Query: 130
AI---HYAVCKDSSGVAPTLSAGSTFSSNCDGSANGDTL-IKVLWVNDSAGDSDIARTNL 185 +
Y +C+ S +CDG G L I++ W + A ++ Sbjct: 127
DLLKSDYYICRSSK------------PGDCDG--KGSMLEIRLAWRGKQGACVNAADSSA 172
Query: 186 ETN 188 +T+ Sbjct: 173 DTS 175 m249-1/a249 90.7%
identity in 204 aa overlap 10 20 30 40 50 60 m249-1.pep
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ
||||||||||: |||||||||||||||||||||||||||||||||||||||||||||||| a249
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQ 10 20
30 40 50 60 70 80 90 100 110 119 m249-1.pep
NLMEGMLMNPTIDSDSNKKNYNLYMGNH-TLSAVDGDFAIDAMKTKGQLAEAQLKRFSYE
|||||||||||||||||||||||||||| :||:||||| :||:||| ||||||||||||| a249
NLMEGMLMNPTIDSDSNKKNYNLYMGNHHALSVVDGDFQVDAIKTKTQLAEAQLKRFSYE 70 80
90 100 110 120 120 130 140 150 160 170 m249-1.pep
LKNALPDAAAIHYAVCKDSSGNAPTLS-GNAFSSNCDNKANGDTLIKVLWVNDSAGDSDI
||||||||||||||||||||| ||||| |::||||||::||||||||||||||||||||| a249
LKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDGSANGDTLIKVLWVNDSAGDSDI 130
140 150 160 170 180 180 190 200 m249-1.pep
SRTNLEVSGDNIVYTYQARVGGREX :|||||::|:||||||||||||||| a249
ARTNLETNGNNIVYTYQARVGGREX 190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 975>:
TABLE-US-01235 g250.seq 1 atgacgcaca cagcctctcc acgtgatgaa
ttcatacgcg gcataaaaga 51 aagttcgccc atgctgattg ggcttttgcc
ttgggcattg atactcggta 101 tgcagggcgg gcaaaaaggt atgggccggc
tggaaatgct gctgatgacg 151 gggatgaact ttgccggcgg ctccgaattt
gccacggtca acctgtgggc 201 ggaacctctg ccgatactgc ttatcgccac
cataaccttt atgattaatt 251 cgcggcatat cctgatgggg ggcggcgctt
gccacgcaca tgaaagaaat 301 accgctgaaa aaagccgcgc ccgcgctgtt
ttttatgtgt ga
This corresponds to the amino acid sequence <SEQ ID 976; ORF
250.ng>:
TABLE-US-01236 g250.pep 1 MTHTASPRDE FIRGIKESSP MLIGLLPWAL
ILGMQGGQKG MGRLEMLLMT 51 GMNFAGGSEF ATVNLWAEPL PILLIATITF
MINSRHILMG GGACHAHERN 101 TAEKSRARAV FYV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 977>:
TABLE-US-01237 m250.seq 1 ATGCACACCT TCCCCGCATA ACGAATTTAT
ACGCGGCATC AAAGAAAGTT 51 CGCCTATGCT GATTGGGCTG CTGCCTTGGG
CATTAATACT CGGTATGCAG 101 GGCGGACAAA AAGGCATGAG CTGGCTGGAA
ATGTTGTTGA TGACCAGTAT 151 GAACTTCGCC GGCGGCTCCG AGTTTGCCAC
GGTCAACCTG TGGGCsGAAC 201 CTCTGCCGAT ACTGCTTATC GCCACCGTAA
CCTTTATGAT TAATTCTCGG 251 CATATCCTGA T.GGGGGCGG CGCTTGCCCC
GCACCTGAAA GGAaTACCGC 301 TGAAAAAAGC CGTGCCCGCA CTGTTTTTTA
TGTGTGA
This corresponds to the amino acid sequence <SEQ ID 978; ORF
250>:
TABLE-US-01238 m250.pep 1 MHTPSPHNEF IRGIKESSPM LIGLLPWALI
LGMQGGQKGM SWLEMLLMTS 51 MNFAGGSEFA TVNLWAEPLP ILLIATVTFM
INSRHILMGG GACPAPERNT 101 AEKSRARTVF YV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 250
shows 91.0% identity over a 111 aa overlap with a predicted ORF
(ORF 250.ng) from N. gonorrhoeae:
TABLE-US-01239 m250/g250 10 20 30 40 50 59 m250.pep
MHTPSPHNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWLEMLLMTSMNFAGGSEF ||
||::||||||||||||||||||||||||||||||||: |||||||:||||||||| g250
MTHTASPRDEFIRGIKESSPMLIGLLPWALILGMQGGQKGMGRLEMLLMTGMNFAGGSEF 10 20
30 40 50 60 60 70 80 90 100 110 m250.pep
ATVNLWAEPLPILLIATVTFMINSRHILMGGGACPAPERNTAEKSRARTVFYVX
|||||||||||||||||:|||||||||||||||| | |||||||||||:|||| g250
ATVNLWAEPLPILLIATITFMINSRHILMGGGACHAHERNTAEKSRARAVFYV 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 979>:
TABLE-US-01240 a250.seq 1 ATGACACACA TAAGCTCGCC CCGTAACGAA
TTTATACGCG GCATCAAAGA 51 AAGTTCGCCC ATGCTGATCG GGCTTTTGCC
TTGGGCATTA ATACTCGGTA 101 TGCAGGGTGG ACAAAAAGGC ATGAGCTGGC
TGGAAATGTT GTTGATGACC 151 GGTATGAACT TCGCCGGCGG CTCCGAGTTT
GCCACGGTCA ACCTGTGGGC 201 GGAACCTCTG CCGATACTGC TTATCGCCAC
CGTAACCTTT ATGATTAATT 251 CTCGGCATAT CCTGATGGGG G.CGGCACTT
GCCCCGCACC TGAAAGAAAT 301 ACCGCTGAAA AAAGCCGTGC CCGCACTGTT
TTTTATGTGT GA
This corresponds to the amino acid sequence <SEQ ID 980; ORF
250.a>:
TABLE-US-01241 a250.pep 1 MTHISSPRNE FIRGIKESSP MLIGLLPWAL
ILGMQGGQKG MSWLEMLLMT 51 GMNFAGGSEF ATVNLWAEPL PILLIATVTF
MINSRHILMG XGTCPAPERN 101 TAEKSRARTV FYV* m250/a250 94.6% identity
in 111 aa overlap 10 20 30 40 50 59 m250.pep
MHTPSPHNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWLEMLLMTSMNFAGGSEF |
||:||||||||||||||||||||||||||||||||||||||||||:||||||||| a250
MTHISSPRNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWLEMLLMTGMNFAGGSEF 10 20
30 40 50 60 60 70 80 90 100 110 m250.pep
ATVNLWAEPLPILLIATVTFMINSRHILMGGGACPAPERNTAEKSRARTVFYVX
|||||||||||||||||||||||||||||| |:||||||||||||||||||||| a250
ATVNLWAEPLPILLIATVTFMINSRHILMGXGTCPAPERNTAEKSRARTVFYVX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 981>:
TABLE-US-01242 g251.seq 1 atgcctgacc caatagggat tcttttcgct
gccgtcgggg ttgatttttt 51 tgccgttgtt ttgagggggc gttttcaacg
aataggcgcg gttggcatgt 101 tgataataat aatcctgatg gcggaggtcg
gaaccaaaac ggtcgtaacc 151 gaggttgacg ctcaggttgt ggcggatttt
ggcggtatcg aaggattttt 201 tgaatgccgc ctgcaagagc ctgtggcttt
ccccgtaaat cacgcggtcg 251 gatttgtagt aggaagacgg cttgtcggca
ctcgggcggc aatatttgtc 301 cgaaccgtcg gcggaacagt gcgtctgctg
aaaatgattg tccaaaccga 351 tgccctgccg gtcgtaagag aggcgggcat
aatccgccca agtgtcttta 401 tcggcattgg tatagacata ttccaaaccg
tagcggcttt tggtgtgcgt 451 ctcgtcgtaa aacacgcccg taccgtattc
cgcgcccacc tccgcaccgt 501 tttcaccgtt ggtaatcagc ccgctgtatt
tgcggccgcc cgcgtatttg 551 ccgtagcctc ttatcgatcc gtatttttta
ttttcatcaa aaaccgcctt 601 ggtcaggaat gccggaaccg tcatatcgcg
cgtgtcgaaa gtttgctgcg 651 tgcgttcgag tatgccgccg atgtagtgcc
gtttgttttc aaaacgaaaa 701 cccgggcgga acagccacga ccggctttcg
tatga
This corresponds to the amino acid sequence <SEQ ID 982; ORF
251.ng>:
TABLE-US-01243 g251.pep 1 MPDPIGILFA AVGVDFFAVV LRGRFQRIGA
VGMLIIIILM AEVGTKTVVT 51 EVDAQVVADF GGIEGFFECR LQEPVAFPVN
HAVGFVVGRR LVGTRAAIFV 101 RTVGGTVRLL KMIVQTDALP VVREAGIIRP
SVFIGIGIDI FQTVAAFGVR 151 LVVKHARTVF RAHLRTVFTV GNQPAVFAAA
RVFAVASYRS VFFIFIKNRL 201 GQECRNRHIA RVESLLRAFE YAADVVPFVF
KTKTRAEQPR PAFV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 983>:
TABLE-US-01244 m251.seq 1 ATGCGTGCTG CGGTAGTCGT AGCGCAAGCC
CGCGCCGACA TCCGCCCACC 51 TGCCCAAACG GACATTGTCC CGAACTGCCG
CGTAATAGCT TTTACCGTTG 101 ATGCTGCGCG GCGTGCAGTC CGTATAAGTA
TTGTTGCCCA AGCGGCAGAT 151 TTGCCCCGTA ACGACATTTC CCCTGCCTAT
GGTGACCCAA TAGGGGCTGG 201 TTTCACTGCC GTTGGGGCTG ATTTTTTTGC
CGTTGTTTTG AGGGGGCGTG 251 TTCGACGAAT AGGCGCGGTT GGCATGTTGA
TAATAATAAT CCTGATGGCG 301 GAGATTAGAG CCAAAGCGGT CAAACCCGAG
ATTCACGCTC AGGTTGTGGC 351 GGATTTTGGC GGTATCGAAG GATTTTTTGA
ATGCCGCCTG CAAGAGCCTG 401 TGGCTTTCCC CGTAAATCAC GCGATCGGAT
TTGTAATAGG AAAACGGCTT 451 GTCGGCACTC GGGCGGCAAT ATTTGTCCGA
ACCGTCGGCA GAACAGTGCG 501 TCTGCTGAAA ATGATTATCC AAACCGATGC
CCTGCCGGTC GTAAGAGAGG 551 CGGGCATAAT CCGCCCAAGT GTCTTTATCG
GCATTGGTAT AGACATATTC 601 CAAACCGTAG CGGCTTTTGG TGTGCGTCTC
GTCGTAAAAC ACGCCCGTAC 651 CGTATTCCGC GCCCACCAGC GCACCGTTTT
CGCCGTTGGT AAACAGTCCG 701 CCGTATTTGT GGTTGCCCGC GTATTTGCCG
TTACCGGGCA AAGAACCCGC 751 CTGTTTTTTA TTTGCATCAA AAACCGCCTT
GGTCAGGAAT GCCGGAACCG 801 TCATATCGCG CGTGTCGAAA GTTTGTTGCG
TGTGTTCGAG TATGCCGCCG 851 ATGTAGTGCC GCTTATTCTC AAAACGAAAA
CCCGGGCGGA ACAGCCACGA 901 CCGGCTTTCG TATGA
This corresponds to the amino acid sequence <SEQ ID 984; ORF
251>:
TABLE-US-01245 m251.pep 1 MRAAVVVAQA RADIRPPAQT DIVPNCRVIA
FTVDAARRAV RISIVAQAAD 51 LPRNDISPAY GDPIGAGFTA VGADFFAVVL
RGRVRRIGAV GMLIIIILMA 101 EIRAKAVKPE IHAQVVADFG GIEGFFECRL
QEPVAFPVNH AIGFVIGKRL 151 VGTRAAIFVR TVGRTVRLLK MIIQTDALPV
VREAGIIRPS VFIGIGIDIF 201 QTVAAFGVRL VVKHARTVFR AHQRTVFAVG
KQSAVFVVAR VFAVTGQRTR 251 LFFICIKNRL GQECRNRHIA RVESLLRVFE
YAADVVPLIL KTKTRAEQPR 301 PAFV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 251
shows 85.2% identity over a 243 aa overlap with a predicted ORF
(ORF 251.ng) from N. gonorrhoeae:
TABLE-US-01246 m251/g251 40 50 60 70 80 90 m251.pep
TVDAARRAVRISIVAQAADLPRNDISPAYGDPIGAGFTAVGADFFAVVLRGRVRRIGAVG ||||
|:|||:|||||||||| :|||||| g251 MPDPIGILFAAVGVDFFAVVLRGRFQRIGAVG 10
20 30 100 110 120 130 140 150 m251.pep
MLIIIILMAEIRAKAVKPEIHAQVVADFGGIEGFFECRLQEPVAFPVNHAIGFVIGKRLV
||||||||||: :|:| |: |||||||||||||||||||||||||||||:|||:|:||| g251
MLIIIILMAEVGTKTVVTEVDAQVVADFGGIEGFFECRLQEPVAFPVNHAVGFVVGRRLV 40 50
60 70 80 90 160 170 180 190 200 210 m251.pep
GTRAAIFVRTVGRTVRLLKMIIQTDALPVVREAGIIRPSVFIGIGIDIFQTVAAFGVRLV
|||||||||||| ||||||||:|||||||||||||||||||||||||||||||||||||| g251
GTRAAIFVRTVGGTVRLLKMIVQTDALPVVREAGIIRPSVFIGIGIDIFQTVAAFGVRLV 100
110 120 130 140 150 220 230 240 250 260 270 m251.pep
VKHARTVFRAHQRTVFAVGKQSAVFVVARVFAVTGQRTRLFFICIKNRLGQECRNRHIAR
||||||||||| ||||:||:| |||::||||||:: |: :||| |||||||||||||||| g251
VKHARTVFRAHLRTVFTVGNQPAVFAAARVFAVASYRS-VFFIFIKNRLGQECRNRHIAR 160
170 180 190 200 210 280 290 300 m251.pep
VESLLRVFEYAADVVPLILKTKTRAEQPRPAFVX
||||||:|||||||||:::||||||||||||||| g251
VESLLRAFEYAADVVPFVFKTKTRAEQPRPAFVX 220 230 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 985>:
TABLE-US-01247 a251.seq 1 ATGCGTGCTG CGGTAGTCGT AGCGCAACCC
CGCGCCGACA TCCGCCCACC 51 TGCCCAAACG GACATTGTCC CGAACTGCCG
CGTAATAGCT TTTGCCGTTG 101 ATGCTGCGCG GCGTGCAGTC CGTATAAGTA
TTGTTGCCCA AGCGGCAGAT 151 TTGCCCCGTA ACCACATTTC CCCTGCCTAT
GCTGACCCAA TAGGGTTGGT 201 CCTTGCCGCC GTTGGGGTTG GCGGTTTTAG
GGGGCGTTTT CGACGAATAG 251 GCGCGGTTGG CATGTTGATA ATAATAATCC
TGATGGCGGA GATTAGAGTC 301 AAAGCGGTCA AAACCGAGAT TCACGCTCAG
GTTGTGGCGG ATTTTGGCGG 351 TATCGAAGGA TTTTTTGAAT GCCGCCTGCA
AGAGCCTGTG GCTTTCCCCG 401 TAAATCACGC GGTCGGATTT GTAGTAGGAA
AACGGCTTGT CGGCACTCGG 451 GCGGCAATAT TTGTCCGAAC CGTCGGCAGA
ACAGTGCGTC TGCTGAAAAT 501 GATTGTCCAA ACCGATGCCC TGCCGGTCGT
AAGAGAGGCG GGCATAATCC 551 ACCCAAGTGT CTTTATCGGC ATTGGTATAG
ACATATTCCA AACCGTAGCG 601 GCTTTTGGTG TGCGTCTCGT CGTAAAACAC
GCCCGTACCG TATTCCGCGC 651 CCACCAGCGC ACCGTTTTCG CCGTTGGTAA
ACAGACCGCC GTATTTGTGG 701 TCGCCCGCGT ATTTGCCGTT GCCTCTTATC
GGTCCGTATT TTCTATTTTC 751 ATCAAAAACC GCCTTGGTCA GGAATGCCGG
AACCGTCATA TCGCGCGTGT 801 CGAAAGTTTG TTGCGTGTGT TCGAGTATGC
CGCCGATGTA GTGCCGTTTG 851 TTTTCAAAAC GAAAACCCGG GCGGAACAGC
CACGATCGGC TTTCGTATGA
This corresponds to the amino acid sequence <SEQ ID 986; ORF
251.a>:
TABLE-US-01248 a251.pep 1 MRAAVVVAQP RADIRPPAQT DIVPNCRVIA
FAVDAARRAV RISIVAQAAD 51 LPRNHISPAY ADPIGLVLAA VGVGGFRGRF
RRIGAVGMLI IIILMAEIRV 101 KAVKTEIHAQ VVADFGGIEG FFECRLQEPV
AFPVNHAVGF VVGKRLVGTR 151 AAIFVRTVGR TVRLLKMIVQ TDALPVVREA
GIIHPSVFIG IGIDIFQTVA 201 AFGVRLVVKH ARTVFRAHQR TVFAVGKQTA
VFVVARVFAV ASYRSVFSIF 251 IKNRLGQECR NRHIARVESL LRVFEYAADV
VPFVFKTKTR AEQPRSAFV* m251/a251 88.5% identity in 304 aa overlap 10
20 30 40 50 60 m251.pep
MRAAVVVAQARADIRPPAQTDIVPNCRVIAFTVDAARRAVRISIVAQAADLPRNDISPAY
||||||||| |||||||||||||||||||||:|||||||||||||||||||||| ||||| a251
MRAAVVVAQPRADIRPPAQTDIVPNCRVIAFAVDAARRAVRISIVAQAADLPRNHISPAY 10 20
30 40 50 60 70 80 90 100 110 120 m251.pep
GDPIGAGFTAVGADFFAVVLRGRVRRIGAVGMLIIIILMAEIRAKAVKPEIHAQVVADFG :||||
::|||: | ||| |||||||||||||||||||:|||| ||||||||||| a251
ADPIGLVLAAVGVGGF----RGRFRRIGAVGMLIIIILMAEIRVKAVKTEIHAQVVADFG 70 80
90 100 110 130 140 150 160 170 180 m251.pep
GIEGFFECRLQEPVAFPVNHAIGFVIGKRLVGTRAAIFVRTVGRTVRLLKMIIQTDALPV
|||||||||||||||||||||:|||:||||||||||||||||||||||||||:||||||| a251
GIEGFFECRLQEPVAFPVNHAVGFVVGKRLVGTRAAIFVRTVGRTVRLLKMIVQTDALPV 120
130 140 150 160 170 190 200 210 220 230 240 m251.pep
VREAGIIRPSVFIGIGIDIFQTVAAFGVRLVVKHARTVFRAHQRTVFAVGKQSAVFVVAR
|||||||:||||||||||||||||||||||||||||||||||||||||||||:||||||| a251
VREAGIIHPSVFIGIGIDIFQTVAAFGVRLVVKHARTVFRAHQRTVFAVGKQTAVFVVAR 180
190 200 210 220 230 250 260 270 280 290 300 m251.pep
VFAVTGQRTRLFFICIKNRLGQECRNRHIARVESLLRVFEYAADVVPLILKTKTRAEQPR ||||::
|: :| | ||||||||||||||||||||||||||||||||:::|||||||||| a251
VFAVASYRS-VFSIFIKNRLGQECRNRHIARVESLLRVFEYAADVVPFVFKTKTRAEQPR 240
250 260 270 280 290 m251.pep PAFVX |||| a251 SAFVX 300
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 987>:
TABLE-US-01249 g253.seq 1 atgatcgaca gggaccgtat gttgcgggac
acgttggaac gtgtgcgtgc 51 ggggtcgttc tggttatggg tggtggtggc
atcgatgatg tttaccgccg 101 gattttcagg cacttatctt ctgatggaca
atcaggggct gaatttcttt 151 ttagttttgg cgggagtgtt gggcatgaat
acgctgatgc tggcagtatg 201 gttggcaacg ttgttcctgc gcgtgaaagt
gggacggttt ttcagcagtc 251 cggcgacgtg gtttcggggc aaaggccctg
taaatcaggc ggtgttgcgg 301 ctgtatgcgg accagtggcg gcaaccttcg
gtacgatgga aaataggcgc 351 aacggcgcac agcttgtggc tctgcacgct
gctcggaatg ctggtgtcgg 401 tattgctgct gcttttggtg cggcaatata
cgttcaactg ggaaagcacg 451 ctgttgagca atgccgcttc ggtacgcgcg
gtggaaatgt tggcatggct 501 gccgtcgaaa ctcggtttcc ctgtccccga
tgcgcgggcg gtcatcgaag 551 gtcgtctgaa cggcaatatt gccgatgcgc
gggcttggtc ggggctgctg 601 gtcggcagta tcgtctgcta cggcatcctg
ccgcgcctct tggcttgggt 651 agtgtgtaaa atccttttga aaacaagcga
aaacggattg gatttggaaa 701 aaacctatta tcaggcggtc atccgccgct
ggcagaacaa aatcaccgat 751 gcggatacgc gtcgggaaac cgtgtccgcc
gtttcgccga aaatcgtctt 801 gaacgatgcg ccgaaatggg cgctcatgct
ggagaccgag tggcaggacg 851 gccaatggtt cgagggcagg ctggcgcagg
aatggctgga taagggcgtt 901 gccgccaatc gggaacaggt tgccgcgctg
gagacagagc tgaagcagaa 951 accggcgcaa ctgcttatcg gcgtacgcgc
ccaaactgtg ccggaccggg 1001 gcgtgctgcg gcagattgtg cggctttcgg
aagcggcgca gggcggcgcg 1051 gtggtgcagc ttttggcgga acaggggctt
tcagacgacc tttcggaaaa 1101 gctggaacat tggcgtaacg cgctgaccga
atgcggcgcg gcgtggcttg 1151 agcctgacag ggtggcgcag gaaggccgtt
tgaaagacca ataa
This corresponds to the amino acid sequence <SEQ ID 988; ORF
253.ng>:
TABLE-US-01250 g253.pep 1 MIDRDRMLRD TLERVRAGSF WLWVVVASMM
FTAGFSGTYL LMDNQGLNFF 51 LVLAGVLGMN TLMLAVWLAT LFLRVKVGRF
FSSPATWFRG KGPVNQAVLR 101 LYADQWRQPS VRWKIGATAH SLWLCTLLGM
LVSVLLLLLV RQYTFNWEST 151 LLSNAASVRA VEMLAWLPSK LGFPVPDARA
VIEGRLNGNI ADARAWSGLL 201 VGSIVCYGIL PRLLAWVVCK ILLKTSENGL
DLEKTYYQAV IRRWQNKITD 251 ADTRRETVSA VSPKIVLNDA PKWALMLETE
WQDGQWFEGR LAQEWLDKGV 301 AANREQVAAL ETELKQKPAQ LLIGVRAQTV
PDRGVLRQIV RLSEAAQGGA 351 VVQLLAEQGL SDDLSEKLEH WRNALTECGA
AWLEPDRVAQ EGRLKDQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 989>:
TABLE-US-01251 m253.seq 1 ATGATTGACA GGAACCGTAT GCTGCGGGAG
ACGTTGGAAC GTGTGCGTGC 51 GGGGTCGTTC TGGTTGTGGG TGGTGGCGGC
GACGTTTGCA TTTTTTACCG 101 GTTTTTCAGT CACTTATCTT CTAATGGACA
ATCAGGGTCT GAATTTCTTT 151 TTGGTTTTGG CGGGCGTGTT GGGCATGAAT
ACGCTGATGC TGGCAGTATG 201 GTTGGCAATG TTGTTCCTGC GTGTGAAAGT
GGGGCGTTTT TTCAGCAGTC 251 CGGCGACGTG GTTTCGGGGC AAAGACCCTG
TAAATCAGGC GGTGTTGCGG 301 CTGTATGCGG ACGAGTGGCG GCAACCTTCG
GTACGTTGGA AAATAGGCGC 351 AACGTCGCAC AGCCTGTGGC TCTGCACGCT
GCTCGGAATG CTGGTGTCGG 401 TATTGTTGCT GCTTTTGGTG CGGCAATATA
CGTTCAACTG GGAAAGCACG 451 CTGTTGAGCA ATGCCGCTTC GGTACGCGCG
GTGGAAATGT TGGCATGGCT 501 GCCGTCGAAA CTCGGTTTCC CTGTCCCCGA
TGCGCGGGCG GTCATCGAAG 551 GCCGTCTGAA CGGCAATATT GCCGATGCGC
GGGCTTGGTC GGGGCTGCTG 601 GTCGGCAGTA TCGCCTGCTA CGGCATCCTG
CCGCGCCTGC TGGCTTGGGT 651 AGTGTGTAAA ATCCTTTTGA AAACAAGCGA
AAACGGATTG GATTTGGAAA 701 AGCCCTATTA TCAGGCGGTC ATCCGCCGCT
GGCAGAACAA AATCACCGAT 751 GCGGATACGC GTCGGGAAAC CGTGTCCGCC
GTTTCACCGA AAATCATCTT 801 GAACGATGCG CCGAAATGGG CGGTCATGCT
GGAGACCGAG TGGCAGGACG 851 GCGAATGGTT CGAGGGCAGG CTGGCGCAGG
AATGGCTGGA TAAGGGCGTT 901 GCCACCAATC GGGAACAGGT TGCCGCGCTG
GAGACAGAGC TGAAGCAGAA 951 ACCGGCGCAA CTGCTTATCG GCGTGCGCGC
CCAAACTGTG CCGGACCGCG 1001 GCGTGTTGCG GCAGATTGTC CGACTCTCGG
AAGCGGCGCA GGGCGGCGCG 1051 GTGGTGCAGC TTTTGGCGGA ACAGGGGCTT
TCAGACGACC TTTCGGAAAA 1101 GCTGGAACAT TGGCGTAACG CGCTGGCCGA
ATGCGGCGCG GCGTGGCTTG 1151 AGCCTGACAG GGCGGCGCAG GAAGGGCGTT
TGAAAGACCA ATAA
This corresponds to the amino acid sequence <SEQ ID 990; ORF
253>:
TABLE-US-01252 m253.pep 1 MIDRNRMLRE TLERVRAGSF WLWVVAATFA
FFTGFSVTYL LMDNQGLNFF 51 LVLAGVLGMN TLMLAVWLAM LFLRVKVGRF
FSSPATWFRG KDPVNQAVLR 101 LYADEWRQPS VRWKIGATSH SLWLCTLLGM
LVSVLLLLLV RQYTFNWEST 151 LLSNAASVRA VEMLAWLPSK LGFPVPDARA
VIEGRLNGNI ADARAWSGLL 201 VGSIACYGIL PRLLAWVVCK ILLKTSENGL
DLEKPYYQAV IRRWQNKITD 251 ADTRRETVSA VSPKIILNDA PKWAVMLETE
WQDGEWFEGR LAQEWLDKGV 301 ATNREQVAAL ETELKQKPAQ LLIGVRAQTV
PDRGVLRQIV RLSEAAQGGA 351 VVQLLAEQGL SDDLSEKLEH WRNALAECGA
AWLEPDRAAQ EGRLKDQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 253
shows 94.7% identity over a 397 aa overlap with a predicted ORF
(ORF 253.ng) from N. gonorrhoeae.
TABLE-US-01253 m253/g253 10 20 30 40 50 60 m253.pep
MIDRNRMLRETLERVRAGSFWLWVVAATFAFFTGFSVTYLLMDNQGLNFFLVLAGVLGMN
||||:||||:|||||||||||||||:|:: | :||| ||||||||||||||||||||||| g253
MIDRDRMLRDTLERVRAGSFWLWVVVASMMFTAGFSGTYLLMDNQGLNFFLVLAGVLGMN 10 20
30 40 50 60 70 80 90 100 110 120 m253.pep
TLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSVRWKIGATSH
||||||||| ||||||||||||||||||||| ||||||||||||:|||||||||||||:| g253
TLMLAVWLATLFLRVKVGRFFSSPATWFRGKGPVNQAVLRLYADQWRQPSVRWKIGATAH 70 80
90 100 110 120 130 140 150 160 170 180 m253.pep
SLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPSKLGFPVPDARA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g253
SLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPSKLGFPVPDARA 130
140 150 160 170 180 190 200 210 220 230 240 m253.pep
VIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWVVCKILLKTSENGLDLEKPYYQAV
||||||||||||||||||||||||:||||||||||||||||||||||||||||| ||||| g253
VIEGRLNGNIADARAWSGLLVGSIVCYGILPRLLAWVVCKILLKTSENGLDLEKTYYQAV 190
200 210 220 230 240 250 260 270 280 290 300 m253.pep
IRRWQNKITDADTRRETVSAVSPKIILNDAPKWAVMLETEWQDGEWFEGRLAQEWLDKGV
|||||||||||||||||||||||||:||||||||:|||||||||:||||||||||||||| g253
IRRWQNKITDADTRRETVSAVSPKIVLNDAPKWALMLETEWQDGQWFEGRLAQEWLDKGV 250
260 270 280 290 300 310 320 330 340 350 360 m253.pep
ATNREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLSEAAQGGAVVQLLAEQGL
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g253
AANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLSEAAQGGAVVQLLAEQGL 310
320 330 340 350 360 370 380 390 m253.pep
SDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQX
|||||||||||||||:|||||||||||:|||||||||| g253
SDDLSEKLEHWRNALTECGAAWLEPDRVAQEGRLKDQX 370 380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 991>:
TABLE-US-01254 a253.seq 1 ATGATCGACA GGAACCGTAT GCTGCGGGAG
ACGTTGGAAC GTGTGCGTGC 51 GGGGTCGTTC TGGTTGTGGG TGGCGGCGGC
GACGTTTGCG TTTTTTACCG 101 GTTTTTCAGT TACTTATCTT CTAATGGACA
ATCAGGGTCT GAATTTCTTT 151 TTGGTTTTGG CGGGCGTGTT GGGCATGAAT
ACGCTGATGC TGGCAGTATG 201 GTTGGCAATG TTGTTCCTGC GCGTGAAAGT
GGGGCGTTTT TTCAGCAGTC 251 CGGCGACGTG GTTTCGGGGC AAAGACCCTG
TCAATCAGGC GGTGTTGCGG 301 CTGTATGCGG ACGAGTGGCG GCAACCTTCG
GTACGTTGGA AAATAGGCGC 351 AACGTCGCAC AGCCTGTGGC TCTGCACGCT
GCTCGGAATG CTGGTGTCGG 401 TATTGTTGCT GCTTTTGGTG CGGCAATATA
CGTTCAACTG GGAAAGCACG 451 CTGTTGGGCG ATTCGTCTTC GGTACGGCTG
GTGGAAATGT TGGCATGGCT 501 GCCTGCGAAA CTGGGTTTTC CCGTGCCTGA
TGCGCGGGCG GTCATCGAAG 551 GTCGTCTGAA CGGCAATATT GCCGATGCGC
GGGCTTGGTC GGGGCTGCTG 601 GTCGGCAGTA TCGCCTGCTA CGGCATCCTG
CCGCGCCTCT TGGCTTGGGC 651 GGTATGCAAA ATCCTTTTGA AAACAAGCGA
AAACGGCTTG GATTTGGAAA 701 AGCCCTATTA TCAGGCGGTC ATCCGCCGCT
GGCAGAACAA AATCACCGAT 751 GCGGATACGC GTCGGGAAAC CGTGTCCGCC
GTTTCGCCGA AAATCGTCTT 801 GAACGATGCG CCGAAATGGG CGGTCATGCT
GGAGACCGAA TGGCAGGACG 851 GCGAATGGTT CGAGGGCAGG CTGGCGCAGG
AATGGCTGGA TAAGGGCGTT 901 GCCGCCAATC GGGAACAGGT TGCCGCGCTG
GAGACAGAGC TGAAGCAGAA 951 ACCGGCGCAA CTGCTTATCG GCGTGCGCGC
CCAAACTGTG CCCGACCGCG 1001 GCGTGTTGCG GCAGATCGTC CGACTTTCGG
AAGCGGCGCA GGGCGGCGCG 1051 GTGGTGCAGC TTTTGGCGGA ACAGGGGCTT
TCAGACGACC TTTCGGAAAA 1101 GCTGGAACAT TGGCGTAACG CGCTGACCGA
ATGCGGCGCG GCGTGGCTGG 1151 AACCCGACAG AGCGGCGCAG GAAGGCCGTC
TGAAAACCAA CGACCGCACT 1201 TGA
This corresponds to the amino acid sequence <SEQ ID 992; ORF
253.a>:
TABLE-US-01255 a253.pep > 1 MIDRNRMLRE TLERVRAGSF WLWVAAATFA
FFTGFSVTYL LMDNQGLNFF 51 LVLAGVLGMN TLMLAVWLAM LFLRVKVGRF
FSSPATWFRG KDPVNQAVLR 101 LYADEWRQPS VRWKIGATSH SLWLCTLLGM
LVSVLLLLLV RQYTFNWEST 151 LLGDSSSVRL VEMLAWLPAK LGFPVPDARA
VIEGRLNGNI ADARAWSGLL 201 VGSIACYGIL PRLLAWAVCK ILLKTSENGL
DLEKPYYQAV IRRWQNKITD 251 ADTRRETVSA VSPKIVLNDA PKWAVMLETE
WQDGEWFEGR LAQEWLDKGV 301 AANREQVAAL ETELKQKPAQ LLIGVRAQTV
PDRGVLRQIV RLSEAAQGGA 351 VVQLLAEQGL SDDLSEKLEH WRNALTECGA
AWLEPDRAAQ EGRLKTNDRT 401 * m253/a253 97.2% identity in 395 aa
overlap 10 20 30 40 50 60 m253.pep
MIDRNRMLRETLERVRAGSFWLWVVAATFAFFTGFSVTYLLMDNQGLNFFLVLAGVLGMN
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| a253
MIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSVTYLLMDNQGLNFFLVLAGVLGMN 10 20
30 40 50 60 70 80 90 100 110 120 m253.pep
TLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSVRWKIGATSH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a253
TLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSVRWKIGATSH 70 80
90 100 110 120 130 140 150 160 170 180 m253.pep
SLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPSKLGFPVPDARA
||||||||||||||||||||||||||||||||::::||| ||||||||:||||||||||| a253
SLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPAKLGFPVPDARA 130
140 150 160 170 180 190 200 210 220 230 240 m253.pep
VIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWVVCKILLKTSENGLDLEKPYYQAV
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| a253
VIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSENGLDLEKPYYQAV 190
200 210 220 230 240 250 260 270 280 290 300 m253.pep
IRRWQNKITDADTRRETVSAVSPKIILNDAPKWAVMLETEWQDGEWFEGRLAQEWLDKGV
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a253
IRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGEWFEGRLAQEWLDKGV 250
260 270 280 290 300 310 320 330 340 350 360 m253.pep
ATNREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLSEAAQGGAVVQLLAEQGL
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a253
AANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLSEAAQGGAVVQLLAEQGL 310
320 330 340 350 360 370 380 390 m253.pep
SDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQX
|||||||||||||||:||||||||||||||||||| a253
SDDLSEKLEHWRNALTECGAAWLEPDRAAQEGRLKTNDRTX 370 380 390 400
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 993>:
TABLE-US-01256 g254.seq 1 atgtatgcag gcgaacgctt caatacttac
agccatttga gcggtttgat 51 tctggcggcg gcaggtttga tgctgatgct
gctgaaaacc ataggacacg 101 gggacggata ccgtatcttc agcgtatcgg
tttacggcat cagccttctt 151 ctgctctatt tgagttcctc gctgtaccac
ggaattgcag ccggaaaact 201 gaaaagcatt ttgaaaaaaa ccgaccactg
catgatttat gtgctgattg 251 ccggaagcta cacaccgttt gcactggttt
ctttgagaaa cgggccgggc 301 tggacggtat tttcactgtc ctggctgctg
gcggctgcag gaatcgcaca 351 agaactcacc atcggacgga aaagcgaaaa
acgtctgctg tctattgcga 401 tttatatcgt aatgggctgg atggtcttgg
cggtaatgaa atccctgaca 451 gcctcactcc cgccggcagg actggcttgg
ctggcggcag gcggtatgct 501 gtacagcgtc ggcatttact ggtttgtaaa
cgatgaaaaa atccgacacg 551 ggcacggaat ctggcatctg ttcgtattgg
gcggcagcat aacccaattt 601 gtcagcgtgt acggttatgt aatctga
This corresponds to the amino acid sequence <SEQ ID 994; ORF
254.ng>:
TABLE-US-01257 g254.pep 1 MYAGERFNTY SHLSGLILAA AGLMLMLLKT
IGHGDGYRIF SVSVYGISLL 51 LLYLSSSLYH GIAAGKLKSI LKKTDHCMIY
VLIAGSYTPF ALVSLRNGPG 101 WTVFSLSWLL AAAGIAQELT IGRKSEKRLL
SIAIYIVMGW MVLAVMKSLT 151 ASLPPAGLAW LAAGGMLYSV GIYWFVNDEK
IRHGHGIWHL FVLGGSITQF 201 VSVYGYVI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 995>:
TABLE-US-01258 m254.seq (partial) 1 ..GTATCGGTTT ACGGCATCAG
CCTTCTTCTG CTCTATTTGA GTTCCTGGCT 51 GTACCACGGA ATTGCAGCCG
GAAAACTGAA AAGCATTTTG AAAAAAACCG 101 ACCACTGCAT GATTTATGTG
CTGATTGCCG GAAGCTACAC ACCGTTTGCA 151 CTGGTTTCTT TGAGAAACGG
GCCGGGCTGG ACGGTATTTT CACTGTCCTG 201 GCTGCTGGCG GCTGCAGGAA
TCGCACAAGA ACTCACCATC GGACGGAAAA 251 GCGAAAAACG TCTGCTGTCT
ATTGTGATTT ATGTCGTCAT GGGTTGGATG 301 GTCTTGGCGG TAATGAAATC
CCTGACAGCC TCACTCCCGT CGGCAGGACT 351 GGCTTGGCTG GCGGCAGGCG
GTATGCTGTA CAGTGTCGGC ATTTACTGGT 401 TTGTAAACGA TGAAAAAATC
CGACACGGGC ACGGAATCTG GCATCTGTTC 451 GTATTGGGCG GCAGCATCAC
CCAATTTGTC AGCGTGTACG GTTACGTAAT 501 CTGA
This corresponds to the amino acid sequence <SEQ ID 996; ORF
254>:
TABLE-US-01259 m254.pep (partial) 1 ..VSVYGISLLL LYLSSWLYHG
IAAGKLKSIL KKTDHCMIYV LIAGSYTPFA 51 LVSLRNGPGW TVFSLSWLLA
AAGIAQELTI GRKSEKRLLS IVIYVVMGWM 101 VLAVMKSLTA SLPSAGLAWL
AAGGMLYSVG IYWFVNDEKI RHGHGIWHLF 151 VLGGSITQFV SVYGYVI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 254
shows 97.6% identity over a 167 aa overlap with a predicted ORF
(ORF 254.ng) from N. gonorrhoeae:
TABLE-US-01260 m254/g254 10 20 30 m254.pep
VSVYGISLLLLYLSSWLYHGIAAGKLKSIL ||||||||||||||| |||||||||||||| g254
HLSGLILAAAGLMLMLLKTIGHGDGYRIFSVSVYGISLLLLYLSSSLYHGIAAGKLKSIL 20 30
40 50 60 70 40 50 60 70 80 90 m254.pep
KKTDHCMIYVLIAGSYTPFALVSLRNGPGWTVFSLSWLLAAAGIAQELTIGRKSEKRLLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g254
KKTDHCMIYVLIAGSYTPFALVSLRNGPGWTVFSLSWLLAAAGIAQELTIGRKSEKRLLS 80 90
100 110 120 130 100 110 120 130 140 150 m254.pep
IVIYVVMGWMVLAVMKSLTASLPSAGLAWLAAGGMLYSVGIYWFVNDEKIRHGHGIWHLF
|:||:|||||||||||||||||| |||||||||||||||||||||||||||||||||||| g254
IAIYIVMGWMVLAVMKSLTASLPPAGLAWLAAGGMLYSVGIYWFVNDEKIRHGHGIWHLF 140
150 160 170 180 190 160 m254.pep VLGGSITQFVSVYGYVIX
|||||||||||||||||| g254 VLGGSITQFVSVYGYVIX 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 997>:
TABLE-US-01261 a254.seq 1 ATGTATACAG GCGAACGCTT CAATACTTAC
AGCCATTTGA GCGGTTTGAT 51 TCTGGCGGCG GCAGGTTTGG CGCTGATGCT
GCTGAAAACC ATAGGACACG 101 GGGACGGCTA CCGTATCTTC AGCGTATCGG
TTTACGGCAT CAGCCTTCTT 151 CTGCTCTATT TGAGTTCCTC GCTGTACCAC
GGAATTGCAG CCGGAAAACT 201 GAAAAGCATT TTGAAAAAAA CCGACCACTG
CATGATTTAT GTGCTGATTG 251 CCGGAAGCTA CACACCGTTT GCACTGGTTT
CTTTGAGAAA CGGGCCGGGC 301 TGGACGGTAT TTTCACTGTC CTGGCTGCTG
GCGGCTGCAG GAATCGCACA 351 AGAACTCACC ATTGGACGGA AAAGCGAAAA
ACGACTGCTG TCTATTGCGA 401 TTTATATCGT AATGGGCTGG ATGGTCTTGG
CGGTAATGAA ATCCCTGACA 451 GCCTCACTCC CGCCGGCAGG ACTGGCTTGG
CTGGCGGCAG GCGGTATGCT 501 GTACAGCGTC GGCATTTACT GGTTTGTAAA
CGATGAAAAA ATCCGACACG 551 GGCACGGAAT CTGGCATCTG TTCGTATTGG
GCGGCAGCAT CACCCAATTT 601 GTCAGCGTGT ACGGTTACGT AATCTGA
This corresponds to the amino acid sequence <SEQ ID 998; ORF
254.a>:
TABLE-US-01262 a254.pep 1 MYTGERFNTY SHLSGLILAA AGLALMLLKT
IGHGDGYRIF SVSVYGISLL 51 LLYLSSSLYH GIAAGKLKSI LKKTDHCMIY
VLIAGSYTPF ALVSLRNGPG 101 WTVFSLSWLL AAAGIAQELT IGRKSEKRLL
SIAIYIVMGW MVLAVMKSLT 151 ASLPPAGLAW LAAGGMLYSV GIYWFVNDEK
IRHGHGIWHL FVLGGSITQF 201 VSVYGYVI* m254/a254 97.6% identity in 167
aa overlap 10 20 30 m254.pep VSVYGISLLLLYLSSWLYHGIAAGKLKSIL
||||||||||||||| |||||||||||||| a254
HLSGLILAAAGLALMLLKTIGHGDGYRIFSVSVYGISLLLLYLSSSLYHGIAAGKLKSIL 20 30
40 50 60 70 40 50 60 70 80 90 m254.pep
KKTDHCMIYVLIAGSYTPFALVSLRNGPGWTVFSLSWLLAAAGIAQELTIGRKSEKRLLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a254
KKTDHCMIYVLIAGSYTPFALVSLRNGPGWTVFSLSWLLAAAGIAQELTIGRKSEKRLLS 80 90
100 110 120 130 100 110 120 130 140 150 m254.pep
IVIYVVMGWMVLAVMKSLTASLPSAGLAWLAAGGMLYSVGIYWFVNDEKIRHGHGIWHLF
|:||:|||||||||||||||||| |||||||||||||||||||||||||||||||||||| a254
IAIYIVMGWMVLAVMKSLTASLPPAGLAWLAAGGMLYSVGIYWFVNDEKIRHGHGIWHLF 140
150 160 170 180 190 160 m254.pep VLGGSITQFVSVYGYVIX
|||||||||||||||||| a254 VLGGSITQFVSVYGYVIX 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 999>:
TABLE-US-01263 g255.seq 1 atggttggac aggaagcctt gcggggtcag
ttcgtcgccg tgttcgctgc 51 cgcgttgcgt tacgctgtca aaacctgcgc
cgatttccac gcctttgacg 101 gcgttgatgc ccatcatcgc gtaggcgatt
tcggcatcga ggcggtcgaa 151 aacgggttcg cccaaaccga cggggacgtt
ggcggcttcg atatgcagtt 201 tcgcgccgac ggaatccaag gatttgcgca
caccgtccat atagtgttcc 251 agttcggcga tttggctttg gttggcggca
aaaaaaggat tttgggaaat 301 gtgttcgctg ccttcaaacc ggattttttt
ttcgccgact tgggtaacgt 351 aggcggtgat ttccgtgccg aatttttctt
tcagccattt tttggcaacg 401 gctccggcgg caacgcgggc tgcggtttcg
cgggcggaac tcctgccgcc 451 gccccggtag tcgcgcgtac cgtatttgtg
ccaataggta tagtcggcgt 501 gtccggggcg gaaggcggtg gcgatgtcgc
cgtagtcttc gctgcgctgg 551 tcggtgttgc ggattag
This corresponds to the amino acid sequence <SEQ ID 1000; ORF
255.ng>:
TABLE-US-01264 g255.pep 1 MVGQEALRGQ FVAVFAAALR YAVKTCADFH
AFDGVDAHHR VGDFGIEAVE 51 NGFAQTDGDV GGFDMQFRAD GIQGFAHTVH
IVFQFGDLAL VGGKKRILGN 101 VFAAFKPDFF FADLGNVGGD FRAEFFFQPF
FGNGSGGNAG CGFAGGTPAA 151 APVVARTVFV PIGIVGVSGA EGGGDVAVVF
AALVGVAD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1001>:
TABLE-US-01265 m255.seq 1 GTGGTTGGAC AGGAAGCCTT GCGGGGTCAG
TTCGTCGCCG TGTTCGCTGC 51 CGCGTTGCGT TACGCTGTCA AAACCTGCGC
CGATTTCCAC GCCTTTGACG 101 GCGTTGATGC CCATCATCGC GTAGGCGATT
TCGGCATCGA GGCGGTCAAA 151 AACAGGTTCG CCCAAGCCGA CAGGGACATT
GGCTGCTTCG ATATGCAGCT 201 TCGCGCCGAC GGAATCCAAG GATTTGCGCA
CGCTGTCCAT ATAGTTTTCC 251 AGCTCGGCAA TTTGGCTATG GTTGGCGGCA
AAAAAAGGAT TTTGGGAAAT 301 GTGTTCGCAG CCTTCAAACC GGATTTCTTT
TTCGCCGACT TGGGTAACGT 351 AGGCGGTGAT TTCCGTGCCG AATTTTTCTT
TCAACCATTT TTTGGCAACG 401 GCTCCGGCAG CAACGCGGGC GGCGGTTTCA
CGGGCGGAGC TCCTGCCGCC 451 GCCGCGGTAG TCGCGCGTGC CGTATTTGTG
CCAATAGGTA TAGTCGGCGT 501 GGCCGGGGCG GAAGCTGGTG GCGATGTTGC
CGTAGTCTTT GCTGCGCTGG 551 TCGGTATTGC GGATTAA
This corresponds to the amino acid sequence <SEQ ID 1002; ORF
255>:
TABLE-US-01266 m255.pep 1 VVGQEALRGQ FVAVFAAALR YAVKTCADFH
AFDGVDAHHR VGDFGIEAVK 51 NRFAQADRDI GCFDMQLRAD GIQGFAHAVH
IVFQLGNLAM VGGKKRILGN 101 VFAAFKPDFF FADLGNVGGD FRAEFFFQPF
FGNGSGSNAG GGFTGGAPAA 151 AAVVARAVFV PIGIVGVAGA EAGGDVAVVF
AALVGIAD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 255
shows 88.8% identity over a 188 aa overlap with a predicted ORF
(ORF 255.ng) from N. gonorrhoeae:
TABLE-US-01267 m255/g255 10 20 30 40 50 60 m255.pep
VVGQEALRGQFVAVFAAALRYAVKTCADFHAFDGVDAHHRVGDFGIEAVKNRFAQADRDI
:||||||||||||||||||||||||||||||||||||||||||||||||:| |||:| |: g255
MVGQEALRGQFVAVFAAALRYAVKTCADFHAFDGVDAHHRVGDFGIEAVENGFAQTDGDV 10 20
30 40 50 60 70 80 90 100 110 120 m255.pep
GCFDMQLRADGIQGFAHAVHIVFQLGNLAMVGGKKRILGNVFAAFKPDFFFADLGNVGGD |
||||:||||||||||:||||||:|:||:|||||||||||||||||||||||||||||| g255
GGFDMQFRADGIQGFAHTVHIVFQFGDLALVGGKKRILGNVFAAFKPDFFFADLGNVGGD 70 80
90 100 110 120 130 140 150 160 170 180 m255.pep
FRAEFFFQPFFGNGSGSNAGGGFTGGAPAAAAVVARAVFVPIGIVGVAGAEAGGDVAVVF
||||||||||||||||:||| ||:||:|||| ||||:||||||||||:|||:|||||||| g255
FRAEFFFQPFFGNGSGGNAGCGFAGGTPAAAPVVARTVFVPIGIVGVSGAEGGGDVAVVF 130
140 150 160 170 180 189 m255.pep AALVGIADX |||||:||| g255
AALVGVADX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1003>:
TABLE-US-01268 a255.seq 1 GTGGTTGGAC AGGAAGCCTT GCGGGGTGAG
TTCGTCGCCG TGTTCGCTGC 51 CGCGTTGCGT TACGCTGTCA AAACCTGCGC
CGATTTCCAC GCCTTTGACG 101 GCGTTGATGC CCATCATGGC GTAGGCGATT
TCGGCATCGA GGCGGTCGAA 151 TACGGGTTCG CCCAAGCCGA CGGGGACGTT
GGCGGCTTCA ATATGCAGCT 201 TCGCGCCGAC GGAATCCAAG GATTTGCGCA
CGCTGTCCAT ATAGTTTTCC 251 AGCTCGGCAA TTTGGCTATG GTTGGCGGCA
AAAAAAGGAT TTTGGGAAAT 301 GTGTTCGCAG CCTTCAAACC GGATTTCTTT
TTCGCCGACT TGGGTAACGT 351 AGGCGGTGAT TTCCGTGCCG AATTTTTCTT
TCAACCATTT TTTGGCAACG 401 GCTCCGGCGG CAACGCGGGC GGCGGTTTCG
CGGGCGGAAC TCCTGCCGCC 451 GCCCCGGTAG TCGCGCGTGC CGTATTTGTG
CCAATAGGTA TAGTCGGCGT 501 GGCCGGGGCG GAAGCTGGTG GCGATGTTGC
CGTAGTCTTT GCTGCGCTGG 551 TCGGTATTGC GGATTAA
This corresponds to the amino acid sequence <SEQ ID 1004; ORF
255.a>:
TABLE-US-01269 a255.pep 1 VVGQEALRGE FVAVFAAALR YAVKTCADFH
AFDGVDAHHG VGDFGIEAVE 51 YGFAQADGDV GGFNMQLRAD GIQGFAHAVH
IVFQLGNLAM VGGKKRILGN 101 VFAAFKPDFF FADLGNVGGD FRAEFFFQPF
FGNGSGGNAG GGFAGGTPAA 151 APVVARAVFV PIGIVGVAGA EAGGDVAVVF
AALVGIAD* m255/a255 93.1% identity in 188 aa overlap 10 20 30 40 50
60 m255.pep
VVGQEALRGQFVAVFAAALRYAVKTCADFHAFDGVDAHHRVGDFGIEAVKNRFAQADRDI
|||||||||:||||||||||||||||||||||||||||| |||||||||: ||||| |: a255
VVGQEALRGEFVAVFAAALRYAVKTCADFHAFDGVDAHHGVGDFGIEAVEYGFAQADGDV 10 20
30 40 50 60 70 80 90 100 110 120 m255.pep
GCFDMQLRADGIQGFAHAVHIVFQLGNLAMVGGKKRILGNVFAAFKPDFFFADLGNVGGD |
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a255
GGFNMQLRADGIQGFAHAVHIVFQLGNLAMVGGKKRILGNVFAAFKPDFFFADLGNVGGD 70 80
90 100 110 120 130 140 150 160 170 180 m255.pep
FRAEFFFQPFFGNGSGSNAGGGFTGGAPAAAAVVARAVFVPIGIVGVAGAEAGGDVAVVF
||||||||||||||||:||||||:||:|||| |||||||||||||||||||||||||||| a255
FRAEFFFQPFFGNGSGGNAGGGFAGGTPAAAPVVARAVFVPIGIVGVAGAEAGGDVAVVF 130
140 150 160 170 180 189 m255.pep AALVGIADX ||||||||| a255
AALVGIADX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1005>:
TABLE-US-01270 g256.seq 1 atgctcgcgg tacgcaatcg gggttggcac
ggcgcagtcg tccatttccg 51 cagctgcggc ggcgtagcga acaccgcccc
ggtgttctac cacttgggtg 101 ataccgccga aatcgccttt gctttggaca
cgctcaccgc gcgttaccgt 151 gaaatatacg ccgtcggcgt atcgctgggc
ggcaacgcgc cggcaaaata 201 tttgggcgaa cagggcaaaa aggcattgcc
gcacgcctcg gccgccgtat 251 ccgcccccgt tgatgcagag gcggcaggca
gccgcttcga cagcggcatc 301 acgcggctgc tctacacgcg ctacttcctc
cgcacactga tacccaaagc 351 acgttcgctc caaggttttc agacggcatt
tgccgcaggg tgcaaaacac 401 tgggcgagtt tgacgaccgt ttcaccgcac
cgctgcacgg ctttgccgac 451 cggcacgact actaccgcca aacttcctgc
aaaccgctgc tcaaacacgt 501 tgccaaaccg ctgctcctgc tcaatgccgc
caacgacccc ttcctgccgc 551 ccgaagccct gccccgtgca gacgaagcgt
ccgaagccgt taccctgttc 601 caacctgcac acggcgggca cgccggcttt
gtcagcagca ccggcggcag 651 gctgcacctg caatggctgc cgcagaccgt
cctgtcctat tttgacagct 701 tccgcacaaa caggcgttaa
This corresponds to the amino acid sequence <SEQ ID 1006; ORF
256.ng>:
TABLE-US-01271 g256.pep 1 MLAVRNRGWH GAVVHFRSCG GVANTAPVFY
HLGDTAEIAF ALDTLTARYR 51 EIYAVGVSLG GNAPAKYLGE QGKKALPHAS
AAVSAPVDAE AAGSRFDSGI 101 TRLLYTRYFL RTLIPKARSL QGFQTAFAAG
CKTLGEFDDR FTAPLHGFAD 151 RHDYYRQTSC KPLLKHVAKP LLLLNAANDP
FLPPEALPRA DEASEAVTLF 201 QPAHGGHAGF VSSTGGRLHL QWLPQTVLSY
FDSFRTNRR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1007>:
TABLE-US-01272 m256.seq 1 ATGCTTGCGG TACGCGATCG GGGTTGGCAC
GGCGTAGTCG TCCATTTCCG 51 CAGCTGCGGC GGCATTGCCA ACACCGCTCC
GGTGTTCTAC CA.CTtGGCG 101 ATACCGCCGA AATCGCCTTT ACTTTGGACA
CGTTCGCCGC GCGTTACCGT 151 GAAAtATACG CCGTCGGCGT ATCGCTGGGC
GGCAACGCGC TGGCAAAATA 201 TTTGGGCGAA CAGGGCAAAA AGGCATTGCC
GCAAGCCGCT GCCGTCATCT 251 CCGCCCCCGT CGATGCAGAG GCGGCAGGCA
GACGCTTCGA CAGCGGCATC 301 ACGCGGCTGC TCTACACGCG CTACTTCCTC
CGCACCCTGA TACCCAAAGC 351 AAAATCGCTC CAAGGTTTTC AGACGGCATT
TGCCGCAGGG TGCAAAACAC 401 TGGGCGAGTT TGACGACCGC TTCACCGCAC
CGCTGCACGG CTTTGCCGAC 451 CGGCACGACT ACTACCGCCA AACTTCCTGC
AAACCGCTGC TCAAACACGT 501 TGCCAAACCG CTGCTCCTGC TCAATGCCGT
CAACGACCCC TTCCTGCCGC 551 CCGAAGCCGT GCCCCGCGCA GACGAAGTAT
CCGAAGCCGT TACCCTGTTC 601 CAGCCGGCAT ATGGTGGTCA TGTCGGCTTT
GTCAGCAGCA CCGGCGGCAG 651 GCTGCACCTG CAATGGCTGC CGCAGACCGT
CCTGTCCTAT TTCGACAGCT 701 TCCGCACAAA CAGGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1008; ORF
256>:
TABLE-US-01273 m256.pep 1 MLAVRDRGWH GVVVHFRSCG GIANTAPVFY
XLGDTAEIAF TLDTFAARYR 51 EIYAVGVSLG GNALAKYLGE QGKKALPQAA
AVISAPVDAE AAGRRFDSGI 101 TRLLYTRYFL RTLIPKAKSL QGFQTAFAAG
CKTLGEFDDR FTAPLHGFAD 151 RHDYYRQTSC KPLLKHVAKP LLLLNAVNDP
FLPPEALPRA DEVSEAVTLF 201 QPAYGGHVGF VSSTGGRLHL QWLPQTVLSY
FDSFRTNRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 256
shows 92.9% identity over a 239 aa overlap with a predicted ORF
(ORF 256.ng) from N. gonorrhoeae:
TABLE-US-01274 m256/g256 10 20 30 40 50 60 m256.pep
MLAVRDRGWHGVVVHFRSCGGIANTAPVFYHLGDTAEIAFTLDTFAARYREIYAVGVSLG
|||||:|||||:|||||||||:||||||||||||||||||:|||::|||||||||||||| g256
MLAVRNRGWHGAVVHFRSCGGVANTAPVFYHLGDTAEIAFALDTLTARYREIYAVGVSLG 10 20
30 40 50 60 70 80 90 100 110 120 m256.pep
GNALAKYLGEQGKKALPQAAAVISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKAKSL |||
|||||||||||||:|:|::|||||||||| |||||||||||||||||||||||:|| g256
GNAPAKYLGEQGKKALPHASAAVSAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSL 70 80
90 100 110 120 130 140 150 160 170 180 m256.pep
QGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| g256
QGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDP 130
140 150 160 170 180 190 200 210 220 230 240 m256.pep
FLPPEALPRADEVSEAVTLFQPAYGGHVGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRRX
||||||||||||:||||||||||:|||:|||||||||||||||||||||||||||||||| g256
FLPPEALPRADEASEAVTLFQPAHGGHAGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRRX 190
200 210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1009>:
TABLE-US-01275 a256.seq 1 ATGCTCGCGG TACGCGATCG GGGTTGGAAC
GGCGTAGTCG TCCATTTCCG 51 CAGCTGCGGC GGCGTAGCGA ACACCGCCCC
GGTGTTCTAC CACTTGGGCG 101 ATACCGCCGA AATTGCCTTT ACTTTGGACA
CGCTCGCCGC GCGTTACCGT 151 GAAATATACG CCGTCGGCGT ATCGCTGGGC
GGCAACGCGC TGGCAAAATA 201 TTTGGGCGAA CAGGGCGAAA ACGCGCTGCC
GCAAGCCGCC GCCGTCATCT 251 CCGAAGCCGT CGATGCAGAG GCGGCAGGCA
ACCGCTTCGA CAGCGGCATC 301 ACACGGCTGC TCTACACGCG CTACTTCCTC
CGCACACTGA TACCCAAAGC 351 ACGGTCGCTC CAAGGTTTTC AGACGGCATT
TGCCGCAGGG TGCAAAACAC 401 TGGGCGAGTT TGACGACCGT TTCACCGCAC
CGCTGCACGG CTTTGCCGAT 451 CGGCACGACT ACTACCGCCA AACTTCCTGC
AAACCGCTGC TCAAACACGT 501 TGCCAAACCG CTGCTCCTGC TCAATGCCGT
CAACGACCCC TTCCTGCCGC 551 CCGAAGCGCT GCCCCGCGCA GACGAAGTGT
CCGAAGCCGT TACCCTGTTC 601 CAGCCGACAC ACGGTGGTCA TGTCGGCTTT
GTCGGCAGCA CCGGCGGCAG 651 GCTGCACCTG CAATGGTTGC CGCAGACCGT
CCTGTCCTAT TTCGACAGCT 701 TCCGCACAAA CAGGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1010; ORF
256.a>:
TABLE-US-01276 a256.pep 1 MLAVRDRGWN GVVVHFRSCG GVANTAPVFY
HLGDTAEIAF TLDTLAARYR 51 EIYAVGVSLG GNALAKYLGE QGENALPQAA
AVISAPVDAE AAGNRFDSGI 101 TRLLYTRYFL RTLIPKARSL QGFQTAFAAG
CKTLGEFDDR FTAPLHGFAD 151 RHDYYRQTSC KPLLKHVAKP LLLLNAVNDP
FLPPEALPRA DEVSEAVTLF 201 QPTHGGHVGF VGSTGGRLHL QWLPQTVLSY
FDSFRTNRR* m256/a256 95.4% identity in 239 aa overlap 10 20 30 40
50 60 m256.pep
MLAVRDRGWHGVVVHFRSCGGIANTAPVFYXLGDTAEIAFTLDTFAARYREIYAVGVSLG
|||||||||:|||||||||||:|||||||| |||||||||||||:||||||||||||||| a256
MLAVRDRGWNGVVVHFRSCGGVANTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLG 10 20
30 40 50 60 70 80 90 100 110 120 m256.pep
GNALAKYLGEQGKKALPQAAAVISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKAKSL
||||||||||||::||||||||||||||||||| |||||||||||||||||||||||:|| a256
GNALAKYLGEQGENALPQAAAVISAPVDAEAAGNRFDSGITRLLYTRYFLRTLIPKARSL 70 80
90 100 110 120 130 140 150 160 170 180 m256.pep
QGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a256
QGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDP 130
140 150 160 170 180 190 200 210 220 230 240 m256.pep
FLPPEALPRADEVSEAVTLFQPAYGGHVGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRRX
||||||||||||||||||||||::|||||||:|||||||||||||||||||||||||||| a256
FLPPEALPRADEVSEAVTLFQPTHGGHVGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRRX 190
200 210 220 230 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1011>:
TABLE-US-01277 g256-1.seq 1 ATGATTTTGA CACCGCCGGA CACGCCCTTT
TTCCTCCGCA ACGGCAATGC 51 CGACACGATT GCCGCCAAAT TCCTGCAACA
CCCCGCACCC GCATACCGCC 101 GCGAGATGCT TCCCGACAGC ACGGGTAAAA
CCAAAACCGC CTACGACTTT 151 TCAGCAGGCG GCATTTCGCC CGATGCGCCG
CTGGTCGTGC TGTTTCACGG 201 TTTGGAAGGA AGCAGCCGCA GCCATTACGC
GGTCGAACTG ATGCTCGCGG 251 TACGCAATCG GGGTTGGCAC GGCGCAGTCG
TCCATTTCCG CAGCTGCGGC 301 GGCGTAGCGA ACACCGCCCC GGTGTTCTAC
CACTTGGGTG ATACCGCCGA 351 AATCGCCTTT GCTTTGGACA CGCTCACCGC
GCGTTACCGT GAAATATACG 401 CCGTCGGCGT ATCGCTGGGC GGCAACGCGC
CGGCAAAATA TTTGGGCGAA 451 CAGGGCAAAA AGGCATTGCC GCACGCCTCG
GCCGCCGTAT CCGCCCCCGT 501 TGATGCAGAG GCGGCAGGCA GCCGCTTCGA
CAGCGGCATC ACGCGGCTGC 551 TCTACACGCG CTACTTCCTC CGCACACTGA
TACCCAAAGC ACGTTCGCTC 601 CAAGGTTTTC AGACGGCATT TGCCGCAGGG
TGCAAAACAC TGGGCGAGTT 651 TGACGACCGT TTCACCGCAC CGCTGCACGG
CTTTGCCGAC CGGCACGACT 701 ACTACCGCCA AACTTCCTGC AAACCGCTGC
TCAAACACGT TGCCAAACCG 751 CTGCTCCTGC TCAATGCCGC CAACGACCCC
TTCCTGCCGC CCGAAGCCCT 801 GCCCCGTGCA GACGAAGCGT CCGAAGCCGT
TACCCTGTTC CAACCTGCAC 851 ACGGCGGGCA CGCCGGCTTT GTCAGCAGCA
CCGGCGGCAG GCTGCACCTG 901 CAATGGCTGC CGCAGACCGT CCTGTCCTAT
TTTGACAGCT TCCGCACAAA 951 CAGGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1012; ORF
256-1.ng>:
TABLE-US-01278 g256-1.pep 1 MILTPPDTPF FLRNGNADTI AAKFLQHPAP
AYRREMLPDS TGKTKTAYDF 51 SAGGISPDAP LVVLFHGLEG SSRSHYAVEL
MLAVRNRGWH GAVVHFRSCG 101 GVANTAPVFY HLGDTAEIAF ALDTLTARYR
EIYAVGVSLG GNAPAKYLGE 151 QGKKALPHAS AAVSAPVDAE AAGSRFDSGI
TRLLYTRYFL RTLIPKARSL 201 QGFQTAFAAG CKTLGEFDDR FTAPLHGFAD
RHDYYRQTSC KPLLKHVAKP 251 LLLLNAANDP FLPPEALPRA DEASEAVTLF
QPAHGGHAGF VSSTGGRLHL 301 QWLPQTVLSY FDSFRTNRR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1013>:
TABLE-US-01279 m256-1.seq 1 ATGATTTTAA CACCGCCGGA CACGCCCTTT
TTCCTCCGCA ACGGCAATGC 51 CGACACGATT GCCGCCAAAT TCCTGCAACG
CCCCGCGCCC GCATACCGCC 101 GAGAGCTGCT TCCCGACAGC ACGGGTAAAA
CCAAAGTCGC CTACGACTTT 151 TCAGACGGCA TTTCGCCCGA TGCGCCGCTG
GTCGTGCTGT TTCACGGTTT 201 GGAAGGAAGC AGCCGCAGCC ATTACGCGGT
CGAACTGATG CTTGCGGTAC 251 GCGATCGGGG TTGGCACGGC GTAGTCGTCC
ATTTCCGCAG CTGCGGCGGC 301 ATTGCCAACA CCGCTCCGGT GTTCTACCAC
TTGGGCGATA CCGCCGAAAT 351 CGCCTTTACT TTGGACACGT TCGCCGCGCG
TTACCGTGAA ATATACGCCG 401 TCGGCGTATC GCTGGGCGGC AACGCGCTGG
CAAAATATTT GGGCGAACAG 451 GGCAAAAAGG CATTGCCGCA AGCCGCTGCC
GTCATCTCCG CCCCCGTCGA 501 TGCAGAGGCG GCAGGCAGAC GCTTCGACAG
CGGCATCACG CGGCTGCTCT 551 ACACGCGCTA CTTCCTCCGC ACCCTGATAC
CCAAAGCAAA ATCGCTCCAA 601 GGTTTTCAGA CGGCATTTGC CGCAGGGTGC
AAAACACTGG GCGAGTTTGA 651 CGACCGCTTC ACCGCACCGC TGCACGGCTT
TGCCGACCGG CACGACTACT 701 ACCGCCAAAC TTCCTGCAAA CCGCTGCTCA
AACACGTTGC CAAACCGCTG 751 CTCCTGCTCA ATGCCGTCAA CGACCCCTTC
CTGCCGCCCG AAGCCCTGCC 801 CCGCGCAGAC GAAGTATCCG AAGCCGTTAC
CCTGTTCCAG CCGGCATATG 851 GTGGTCATGT CGGCTTTGTC AGCAGCACCG
GCGGCAGGCT GCACCTGCAA 901 TGGCTGCCGC AGACCGTCCT GTCCTATTTC
GACAGCTTCC GCACAAACAG 951 GCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1014; ORF
256-1>:
TABLE-US-01280 m256-1.pep 1 MILTPPDTPF FLRNGNADTI AAKFLQRPAP
AYRRELLPDS TGKTKVAYDF 51 SDGISPDAPL VVLFHGLEGS SRSHYAVELM
LAVRDRGWHG VVVHFRSCGG 101 IANTAPVFYH LGDTAEIAFT LDTFAARYRE
IYAVGVSLGG NALAKYLGEQ 151 GKKALPQAAA VISAPVDAEA AGRRFDSGIT
RLLYTRYFLR TLIPKAKSLQ 201 GFQTAFAAGC KTLGEFDDRF TAPLHGFADR
HDYYRQTSCK PLLKHVAKPL 251 LLLNAVNDPF LPPEALPRAD EVSEAVTLFQ
PAYGGHVGFV SSTGGRLHLQ 301 WLPQTVLSYF DSFRTNRR* m256-1/g256-1 93.1%
identity in 319 aa overlap 10 20 30 40 50 59 m256-1.pep
MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKTKVAYDFS-DGISPDAP
||||||||||||||||||||||||||:||||||||:|||||||||:||||| ||||||| g256-1
MILTPPDTPFFLRNGNADTIAAKFLQHPAPAYRREMLPDSTGKTKLAYDFSAGGISPDAP 10 20
30 40 50 60 60 70 80 90 100 110 119 m256-1.pep
LVVLFHGLEGSSRSHYAVELMLAVRDRGWHGVVVHFRSCGGIANTAPVFYHLGDTAEIAF
|||||||||||||||||||||||||:|||||:|||||||||:|||||||||||||||||| g256-1
LVVLFHGLEGSSRSHYAVELMLAVRNRGWHGAVVHFRSCGGVANTAPVFYHLGDTAEIAF 70 80
90 100 110 120 120 130 140 150 160 170 179 m256-1.pep
TLDTFAARYREIYAVGVSLGGNALAKYLGEQGKKALPQAAAVISAPVDAEAAGRRFDSGI
:|||::||||||||||||||||| |||||||||||||:|:|::|||||||||| |||||| g256-1
ALDTLTARYREIYAVGVSLGGNAPAKYLGEQGKKALPHASAAVSAPVDAEAAGSRFDSGI 130
140 150 160 170 180 180 190 200 210 220 230 239 m256-1.pep
TRLLYTRYFLRTLIPKAKSLQGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSC
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| g256-1
TRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSC 190
200 210 220 230 240 240 250 260 270 280 290 299 m256-1.pep
KPLLKHVAKPLLLLNAVNDPFLPPEALPRADEVSEAVTLFQPAYGGHVGFVSSTGGRLHL
||||||||||||||||:|||||||||||||||:||||||||||:|||:|||||||||||| g256-1
KPLLKHVAKPLLLLNAANDPFLPPEALPRADEASEAVTLFQPAHGGHAGFVSSTGGRLHL 250
260 270 280 290 300 300 310 319 m256-1.pep QWLPQTVLSYFDSFRTNRRX
|||||||||||||||||||| g256-1 QWLPQTVLSYFDSFRTNRRX 310 320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1015>:
TABLE-US-01281 a256-1.seq 1 ATGATTTTGA CACCGCCGGA CACACCCTTT
TTCCTCCGCA ACGGCAATGC 51 CGACACGATT GCCGCCAAAT TCCTGCAACG
CTCCGCACCT GCATACCGCC 101 GCGAGCTGCT TCCCGACAGC ACGGGTAAAA
CCAAAACCGC CTACGACTTT 151 TCAGACGGCA TTTCGCCCGA TGCGCCGCTG
GTCGTGCTGT TTCACGGTTT 201 GGAGGGCGGC AGTGGCAGCC ATTACGCGGT
CGAACTGATG CTCGCGGTAC 251 GCGATCGGGG TTGGAACGGC GTAGTCGTCC
ATTTCCGCAG CTGCGGCGGC 301 GTAGCGAACA CCGCCCCGGT GTTCTACCAC
TTGGGCGATA CCGCCGAAAT 351 TGCCTTTACT TTGGACACGC TCGCCGCGCG
TTACCGTGAA ATATACGCCG 401 TCGGCGTATC GCTGGGCGGC AACGCGCTGG
CAAAATATTT GGGCGAACAG 451 GGCGAAAACG CGCTGCCGCA AGCCGCCGCC
GTCATCTCCG CACCCGTCGA 501 TGCAGAGGCG GCAGGCAACC GCTTCGACAG
CGGCATCACA CGGCTGCTCT 551 ACACGCGCTA CTTCCTCCGC ACACTGATAC
CCAAAGCACG GTCGCTCCAA 601 GGTTTTCAGA CGGCATTTGC CGCAGGGTGC
AAAACACTGG GCGAGTTTGA 651 CGACCGTTTC ACCGCACCGC TGCACGGCTT
TGCCGATCGG CACGACTACT 701 ACCGCCAAAC TTCCTGCAAA CCGCTGCTCA
AACACGTTGC CAAACCGCTG 751 CTCCTGCTCA ATGCCGTCAA CGACCCCTTC
CTGCCGCCCG AAGCGCTGCC 801 CCGCGCAGAC GAAGTGTCCG AAGCCGTTAC
CCTGTTCCAG CCGACACACG 851 GTGGTCATGT CGGCTTTGTC GGCAGCACCG
GCGGCAGGCT GCACCTGCAA 901 TGGTTGCCGC AGACCGTCCT GTCCTATTTC
GACAGCTTCC GCACAAACAG 951 GCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1016; ORF
256-1.a>:
TABLE-US-01282 a256-1.pep 1 MILTPPDTPF FLRNGNADTI AAKFLQRSAP
AYRRELLPDS TGKTKTAYDF 51 SDGISPDAPL VVLFHGLEGG SGSHYAVELM
LAVRDRGWNG VVVHFRSCGG 101 VANTAPVFYH LGDTAEIAFT LDTLAARYRE
IYAVGVSLGG NALAKYLGEQ 151 GENALPQAAA VISAPVDAEA AGNRFDSGIT
RLLYTRYFLR TLIPKARSLQ 201 GFQTAFAAGC KTLGEFDDRF TAPLHGFADR
HDYYRQTSCK PLLKHVAKPL 251 LLLNAVNDPF LPPEALPRAD EVSEAVTLFQ
PTHGGHVGFV GSTGGRLHLQ 301 WLPQTVLSYF DSFRTNRR* a256-1/m256-1 95.6%
identity in 318 aa overlap 10 20 30 40 50 60 a256-1.pep
MILTPPDTPFFLRNGNADTIAAKFLQRSAPAYRRELLPDSTGKTKLAYDFSDGISPDAPL
||||||||||||||||||||||||||| |||||||||||||||||:|||||||||||||| m256-1
MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKTKVAYDFSDGISPDAPL 10 20
30 40 50 60 70 80 90 100 110 120 a256-1.pep
VVLFHGLEGGSGSHYAVELMLAVRDRGWNGVVVHFRSCGGVANTAPVFYHLGDTAEIAFT
|||||||||:| ||||||||||||||||:|||||||||||:||||||||||||||||||| m256-1
VVLFHGLEGSSRSHYAVELMLAVRDRGWHGVVVHFRSCGGIANTAPVFYHLGDTAEIAFT 70 80
90 100 110 120 130 140 150 160 170 180 a256-1.pep
LDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQAAAVISAPVDAEAAGNRFDSGIT
|||:|||||||||||||||||||||||||||::||||||||||||||||||| ||||||| m256-1
LDTFAARYREIYAVGVSLGGNALAKYLGEQGKKALPQAAAVISAPVDAEAAGRRFDSGIT 130
140 150 160 170 180 190 200 210 220 230 240 a256-1.pep
RLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCK
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| m256-1
RLLYTRYFLRTLIPKAKSLQGFQTAFAAGCKTLGEFDDRFTAPLHGFADRHDYYRQTSCK 190
200 210 220 230 240 250 260 270 280 290 300 a256-1.pep
PLLKHVAKPLLLLNAVNDPFLPPEALPRADEVSEAVTLFQPTHGGHVGFVGSTGGRLHLQ
|||||||||||||||||||||||||||||||||||||||||::|||||||:||||||||| m256-1
PLLKHVAKPLLLLNAVNDPFLPPEALPRADEVSEAVTLFQPAYGGHVGFVSSTGGRLHLQ 250
260 270 280 290 300 310 319 a256-1.pep WLPQTVLSYFDSFRTNRRX
||||||||||||||||||| m256-1 WLPQTVLSYFDSFRTNRRX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1017>:
TABLE-US-01283 g257.seq 1 atgggcaggc atttcgggcg cagacgtttt
ctgacggctg ccgccgttgc 51 tgtggccggt gcggcggttt cttttttgcc
gaatcctttt gccgccggcg 101 gcgaaaaacg caacatggat aaaaaacgcg
atgaaaatgt gtttttctgg 151 aaaggtgtcg cgctgggttc cggcgcggag
ctgcgcctgt tcggcgtgga 201 cgacagacag gcggcggatt tggtcaataa
ggttttggcg gaagtggcgc 251 gtttggaaaa aatgttcagc ctttaccgtg
aagacagcct gatcagccgt 301 ctgaaccgcg acggttatct gacttcgcct
ccggcggatt ttttggaact 351 gttgagcctg gccgcgatat tcacgcgctg a
This corresponds to the amino acid sequence <SEQ ID 1018; ORF
257.ng>:
TABLE-US-01284 g257.pep 1 MGRHFGRRRF LTAAAVAVAG AAVSFLPNPF
AAGGEKRNMD KKRDENVFFW 51 KGVALGSGAE LRLFGVDDRQ AADLVNKVLA
EVARLEKMFS LYREDSLISR 101 LNRDGYLTSP PADFLELLSL AAIFTR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1019>:
TABLE-US-01285 m257.seq 1 ATGGGCAGGC ATTTCGGGCG .CAGCGTTTT
CTGACGGTTG CCGCCGTTGC 51 GGCGGGGaC. GCGGcGGTTT CTTTCCTGCC
GAATCCTTTT GCCGCCGATG 101 ATGAAAAACG CAAcGGGGAT GAAAAACGCA
ATGAAAATGT GTTTTTCTGG 151 AAAGGTGTCG CACTGGGTTC CGGTGCGGa.
CTCCGTCTGT TCGGTGTGGA 201 CGACAGGCGT GCGGCGGATT TGGTCAACAA
GGTTTTGGCG GAAGTGGCGC 251 GTTTGGAAAA ATTGTTCAGC CTTTACCGTG
AAGACAGCCT GATCAGCCGC 301 CTGAACAGGG ACGGTTATCT GACTTCGCCG
TCGGCGGATT TTTTGGAACT 351 GkTGAGCCTG GCCGCGATAT TCACGCkCTG A
This corresponds to the amino acid sequence <SEQ ID 1020; ORF
257>:
TABLE-US-01286 m257.pep 1 MGRHFGXQRF LTVAAVAAGX AAVSFLPNPF
AADDEKRNGD EKRNENVFFW 51 KGVALGSGAX LRLFGVDDRR AADLVNKVLA
EVARLEKLFS LYREDSLISR 101 LNRDGYLTSP SADFLELXSL AAIFTX*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 257
shows 88.0% identity over a 125 aa overlap with a predicted ORF
(ORF 257.ng) from N. gonorrhoeae:
TABLE-US-01287 m257/g257 10 20 30 40 50 60 m257.pep
MGRHFGRQRFLTVAAVAAGTAAVSFLPNPFAADDEKRNGDEKRNENVFFWKGVALGSGAD
|||||||:||||:||||:: |||||||||||| |||| |:||:|||||||||||||||: g257
MGRHFGRRRFLTAAAVAVAGAAVSFLPNPFAAGGEKRNMDKKRDENVFFWKGVALGSGAE 10 20
30 40 50 60 70 80 90 100 110 120 m257.pep
LRLFGVDDRRAADLVNKVLAEVARLEKLFSLYREDSLISRLNRDGYLTSPSADFLELXSL
|||||||||:|||||||||||||||||:|||||||||||||||||||||| |||||| || g257
LRLFGVDDRQAADLVNKVLAEVARLEKMFSLYREDSLISRLNRDGYLTSPPADFLELLSL 70 80
90 100 110 120 m257.pep AAIFTXX ||||| | g257 AAIFTRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1021>:
TABLE-US-01288 a257.seq 1 ATGGGCAGGC ATTTCGGGCG CAGGCGTTTT
TTGACAGTTG CCGCCGTTGC 51 GGCGGCGGGC GCGGCGGTTT CTTTCCTGCC
GAATCCTTTT GCCGCCGATG 101 ATGAAAAACG CAATAAAGAT GAAAAACGCA
ATGAAAATGT GTTTTTCTGG 151 AAAGGTGTCG CACTGGGTTC CGGTGCGGAG
CTCCGTCTGT TCGGTGTGGA 201 CGACAGGCGT GCGGCGGATT TGGTCAACAA
GGTTTTGGCG GAAGTGGCGC 251 GTTTGGAAAA AATGTTCAGC CTTTACCGTG
AAGACAGCCT GATCAGCCGT 301 CTGAACCGTG ACGGTTATTT GACTTCGCCG
CCGGCGGATT TTTTGGAACT 351 GTTGAGCCTG GCCGTGATAT TCACGCGCTG A
This corresponds to the amino acid sequence <SEQ ID 1022; ORF
257.a>:
TABLE-US-01289 a257.pep 1 MGRHFGRRRF LTVAAVAAAG AAVSFLPNPF
AADDEKRNKD EKRNENVFFW 51 KGVALGSGAE LRLFGVDDRR AADLVNKVLA
EVARLEKMFS LYREDSLISR 101 LNRDGYLTSP PADFLELLSL AVIFTR* n257/a257
92.0% identity in 125 aa overlap 10 20 30 40 50 60 m257.pep
MGRHFGXQRFLTVAAVAAGXAAVSFLPNPFAADDEKRNGDEKRNENVFFWKGVALGSGAX ||||||
:||||||||||: |||||||||||||||||| |||||||||||||||||||| a257
MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRNENVFFWKGVALGSGAE 10 20
30 40 50 60 70 80 90 100 110 120 m257.pep
LRLFGVDDRRAADLVNKVLAEVARLEKLFSLYREDSLISRLNRDGYLTSPSADFLELXSL
|||||||||||||||||||||||||||:|||||||||||||||||||||| |||||| || a257
LRLFGVDDRRAADLVNKVLAEVARLEKMFSLYREDSLISRLNRDGYLTSPPADFLELLSL 70 80
90 100 110 120 m257.pep AAIFTXX |:||| a257 AVIFTRX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1023>:
TABLE-US-01290 g258.seq 1 atgcgccgct tcctaccgat cgcagccata
tgcgccgtcg tcctgctgta 51 cggattgacg gcggcgaccg gcagcaccag
ttcgctggcg gattatttct 101 ggtggatagt ctcgttcagc gcaatgctgc
tgctggtgtt gtccgccgtt 151 ttggcacgtt atgtcatatt gctgttgaaa
gacaggcgca acggcgtgtt 201 cggttcgcag attgccaaac gcctttccgg
gatgttcacg ctggtcgccg 251 tactgcccgg cttgttcctg ttcggcattt
ccgcgcagtt tatcaacggc 301 acgattaatt cgtggttcgg caacgacacc
cacgaagccc tcgaacgcag 351 ccttaatttg agcaagtccg cactggattt
ggcggcagac aatgccgtca 401 gcaacgccgt tcccgtacag atagacctca
tcggcaccgc ctccctgtcg 451 ggcaatatgg gcagtgtgct ggaacactac
gccggcagcg gttttgccca 501 gcttgccctg tacaatgccg caagcgggaa
aatcgaaaaa agcatcaatc 551 cgcaccaatt cgaccagccg cttcccgaca
aagaacattg ggaacagatt 601 cagcagaccg gttcggttcg gagtttggaa
agcataggcg gcgtattgta 651 cgcgcaggga tggttgtcgg caggtacgca
caacgggcgc gattacgcgc 701 tgttcttccg ccagccgatt cccgaaaatg
tggcacagga tgccgttctg 751 attgaaaagg cgcgggcgaa atatgccgaa
ttgagttaca gcaaaaaagg 801 tttgcagacc ttttttctgg taaccctgct
gattgcctcg ctgctgtcga 851 tttttcttgc gctggtaatg gcactgtatt
ttgcccgccg tttcgtcgaa 901 cccattctgt cgcttgccga gggcgcaaag
gcggtggcgc agggtgattt 951 cagccagacg cgccccgtat tgcgcaacga
cgagttcgga cgtttgacca 1001 agctgttcaa ccatatgacc gagcagcttt
ccatcgccaa agaagcagac 1051 gaacgcaacc gccggcgcga ggaagccgcc
cgtcactacc tcgagtgcgt 1101 gttggatggg ttgactaccg gtgtggtggt
ctcntacccc ctctcttgtt 1151 gccgtaccgc ggtgttttcc acttgtcatt
cctcccctct ttcttatttc 1201 taa
This corresponds to the amino acid sequence <SEQ ID 1024; ORF
258.ng>:
TABLE-US-01291 g258.pep 1 MRRFLPIAAI CAVVLLYGLT AATGSTSSLA
DYFWWIVSFS AMLLLVLSAV 51 LARYVILLLK DRRNGVFGSQ IAKRLSGMFT
LVAVLPGLFL FGISAQFING 101 TINSWFGNDT HEALERSLNL SKSALDLAAD
NAVSNAVPVQ IDLIGTASLS 151 GNMGSVLEHY AGSGFAQLAL YNAASGKIEK
SINPHQFDQP LPDKEHWEQI 201 QQTGSVRSLE SIGGVLYAQG WLSAGTHNGR
DYALFFRQPI PENVAQDAVL 251 IEKARAKYAE LSYSKKGLQT FFLVTLLIAS
LLSIFLALVM ALYFARRFVE 301 PILSLAEGAK AVAQGDFSQT RPVLRNDEFG
RLTKLFNHMT EQLSIAKEAD 351 ERNRRREEAA RHYLECVLDG LTTGVVVSYP
LSCCRTAVFS TCHSSPLSYF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1025>:
TABLE-US-01292 m258.seq 1 ATGCGCCGTT TTCTACCGAT CGCAGCCATA
TGCGCCGTCG TCCTGTTGTA 51 CGGACTGACG GCGGCAACCG GCAGCACCAG
TTCGCTGGCG GATTATTTCT 101 GGTGGATTGT TGCGTTCAGC GCAATGCTGC
TGCTGGTGTT GTCCGCCGTT 151 TTGGCACGTT ATGTCATATT GCTGTTGAAA
GACAGGCGCG ACGGCGTATT 201 CGGTTCGCAG ATTGCCAAAC GCCTTTCTGG
GATGTTTACG CTGGTTGCCG 251 TACTGCCCGG CGTGTTTCTG TTCGGCGTTT
CCGCACAGTT CATCAACGGC 301 ACGATTAATT CGTGGTTCGG CAACGATACC
CACGAGGCGC TTGAACGCAG 351 CCTCAATTTG AGCAAGTCCG CATTGAATTT
GGCGGCAGAC AACGCCCTCG 401 GCAACGCCGT CCCCGTGCAG ATAGACCTCA
TCGGCGCGGC TTCCCTGCCC 451 GGGGATATGG GCAGGGTGCT GGAACATTAC
GCCGGCAGCG GTTTTGCCCA 501 GCTTGCCCTG TACAATGCCG CAAGCGGCAA
AATCGAAAAA AGCATCAACC 551 CGCACAAGCT CGATCAGCCG TTTCCAGGTA
AGGCGCGTTG GGAAAAAATC 601 CAACGGGCGG GTTCGGTCAG GGATTTGGAA
AGCATAGGCG GCGTATTGTA 651 CGCGCAGGGC TGGCTGTCGG CGGGTACGCA
CAACGGGCGC GATTACGCCT 701 TGTTTTTCCG TCAGCCGGTT CCCAAAGGCG
TGGCAGAGGA TGCCGTCTTA 751 ATCGAAAAGG CAAGGGCGAA ATATGCTGAG
TTGAGTTACA GCAAAAAAGG 801 TTTGCAGACC TTTTTCCTGG CAACCCTGCT
GATTGCCTCG CTGCTGTCGA 851 TTTTTCTTGC ACTGGTCATG GCACTGTATT
TCGCCCGCCG TTTCGTCGAA 901 CCCGTCCTAT CGCTTGCCGA GGGGGCGAAG
GCGGTGGCGC AAGGCGATTT 951 CAGCCAGACG CGCCCCGTGT TGCGCAACGA
CGAGTTCGGA CGCTTGACCA 1001 AGTTGTTCAA CCACATGACC GAGCAGCTTT
CCATCGCCAA AGAAGCAGAC 1051 GAGCGCAACC GCCGGCGCGA GGAAGCCGCC
AGGCATTATC TTGAATGCGT 1101 GTTGGAGGGG CTGACCACGG GCGTGGTGGT
GTTTGACGAA CAAGGCTGTC 1151 TGAAAACsTT CAACAAAGCG GCGGAACAGA
TTyTGGGGAT GCCGCTTACC 1201 CCCcTGTGGG GCAGCAGCCG GCACGGTTGG
CACGGCGTTT CGGCGCAGCA 1251 GTCCCTGCTT GCCGAAGTGT TTGCCGCCAT
CGGCGCGGCG GCAGGTACGG 1301 ACAAACCGGT CCATGTGAAA TATGCCGCGC
CGGACGATGC CAAAATCCTG 1351 CTGGGCAAGG CAACCGTCCT GCCCGAAGAC
AACGGCAACg GCGTGGTAAT 1401 GGTGATTGAC GACATCACCG TTTTGATACA
CGCGCAAAAA GAAGCCGCGT 1451 GGGGCGAAgT GGCGaAgCGG CTGGCACACG
AAATCCGCAA TCCGCTCACG 1501 CCCATCCAGC TTTCCGCCGA ACgGsTGGCG
TkGAAATTGG GCGGGAAGCT 1551 GGATGAGCAG GATGCGCAAA TCCTGACGCG
TTCGACCGAC ACCATCGTCA 1601 AACAGGTGGC GGCATTGAAG GAAATGGTCG
AAGCATTCCG CAATTATGCG 1651 CGTTCCCCTT CGCTCAAATT GGAAAATCAG
GATTTGAACG CCTTAATCGG 1701 CGATGTGTTG GCATTGTATG AAGCCGGTCC
GTGCCGGTTT GCGGCGGACT 1751 TGCCGGCGAA CCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1026; ORF
258>:
TABLE-US-01293 m258.pep 1 MRRFLPIAAI CAVVLLYGLT AATGSTSSLA
DYFWWIVAFS AMLLLVLSAV 51 LARYVILLLK DRRDGVFGSQ IAKRLSGMFT
LVAVLPGVFL FGVSAQFING 101 TINSWFGNDT HEALERSLNL SKSALNLAAD
NALGNAVPVQ IDLIGAASLP 151 GDMGRVLEHY AGSGFAQLAL YNAASGKIEK
SINPHKLDQP FPGKARWEKI 201 QRAGSVRDLE SIGGVLYAQG WLSAGTHNGR
DYALFFRQPV PKGVAEDAVL 251 IEKARAKYAE LSYSKKGLQT FFLATLLIAS
LLSIFLALVM ALYFARRFVE 301 PVLSLAEGAK AVAQGDFSQT RPVLRNDEFG
RLTKLFNHMT EQLSIAKEAD 351 ERNRRREEAA RHYLECVLEG LTTGVVVFDE
QGCLKTFNKA AEQILGMPLT 401 PLWGSSRHGW HGVSAQQSLL AEVFAAIGAA
AGTDKPVHVK YAAPDDAKIL 451 LGKATVLPED NGNGVVMVID DITVLIHAQK
EAAWGEVAKR LAHEIRNPLT 501 PIQLSAERXA XKLGGKLDEQ DAQILTRSTD
TIVKQVAALK EMVEAFRNYA 551 RSPSLKLENQ DLNALIGDVL ALYEAGPCRF
AADLPANR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 258
shows 90.9% identity over a 386 aa overlap with a predicted ORF
(ORF 258.ng) from N. gonorrhoeae:
TABLE-US-01294 m258/g258 10 20 30 40 50 60 m258.pep
MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLLLVLSAVLARYVILLLK
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| g258
MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVSFSAMLLLVLSAVLARYVILLLK 10 20
30 40 50 60 70 80 90 100 110 120 m258.pep
DRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTINSWFGNDTHEALERSLNL
|||:|||||||||||||||||||||||:||||:||||||||||||||||||||||||||| g258
DRRNGVFGSQIAKRLSGMFTLVAVLPGLFLFGISAQFINGTINSWFGNDTHEALERSLNL 70 80
90 100 110 120 130 140 150 160 170 180 m258.pep
SKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHYAGSGFAQLALYNAASGKIEK
|||||:||||||::|||||||||||:||| |:|| ||||||||||||||||||||||||| g258
SKSALDLAADNAVSNAVPVQIDLIGTASLSGNMGSVLEHYAGSGFAQLALYNAASGKIEK 130
140 150 160 170 180 190 200 210 220 230 240 m258.pep
SINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYAQGWLSAGTHNGRDYALFFRQPV
|||||::|||:| | :||:||::||||:|||||||||||||||||||||||||||||||: g258
SINPHQFDQPLPDKEHWEQIQQTGSVRSLESIGGVLYAQGWLSAGTHNGRDYALFFRQPI 190
200 210 220 230 240 250 260 270 280 290 300 m258.pep
PKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLLIASLLSIFLALVMALYFARRFVE
|::||:|||||||||||||||||||||||||||:|||||||||||||||||||||||||| g258
PENVAQDAVLIEKARAKYAELSYSKKGLQTFFLVTLLIASLLSIFLALVMALYFARRFVE 250
260 270 280 290 300 310 320 330 340 350 360 m258.pep
PVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKLFNHMTEQLSIAKEADERNRRREEAA
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g258
PILSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKLFNHMTEQLSIAKEADERNRRREEAA 310
320 330 340 350 360 370 380 390 400 410 420 m258.pep
RHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQILGMPLTPLWGSSRHGWHGVSAQQSLL
||||||||:|||||||| :| :| g258
RHYLECVLDGLTTGVVVSYPLSCCRTAVFSTCHSSPLSYFX 370 380 390 400
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1027>:
TABLE-US-01295 a258.seq 1 ATGCGCCGTT TTCTACCGAT CGCAGCCATA
TGCGCCGTCG TCCTGTTGTA 51 CGGACTGACG GCGGCAACCG GCAGCACCAG
TTCGCTGGCG GATTATTTCT 101 GGTGGATTGT TGCGTTCAGC GCAATGCTGC
TGCTGGTGTT GTCCGCCGTT 151 TTGGCACGTT ATGTCATATT GCTGTTGAAA
GACAGGCGCG ACGGCGTATT 201 CGGTTCGCAG ATTGCCAAAC GCCTTTCCGG
GATGTTTACG CTGGTTGCCG 251 TACTGCCCGG CGTGTTTCTG TTCGGCGTTT
CCGCACAGTT TATCAACGGC 301 ACGATTAATT CGTGGTTCGG CAACGATACC
CACGAGGCGC TTGAACGCAG 351 CCTCAATTTG AGCAAGTCCG CATTGAATCT
GGCGGCAGAC AACGCCCTTG 401 GCAACGCCAT CCCCGTGCAG ATAGACCTCA
TCGGCGCGGC TTCCCTGCCC 451 GGGGATATGG GCAGGGTGCT GGAACATTAC
GCCGGCAGCG GTTTTGCCCA 501 GCTTGCCCTG TACAATGCCG CAAGCGGCAA
AATCGAAAAA AGCATCAACC 551 CGCACAAGCT CGATCAGCCG TTTCCAGGTA
AGGCGCGTTG GGAAAAAATC 601 CAACAGGCGG GTTCGGTCAG GGATTTGGAA
AGCATAGGCG GCGTATTGTA 651 CGCGCAGGGC TGGCTGTCGG CAGGTACGCA
CAACGGGCGC GATTACGCCT 701 TGTTTTTCCG TCAGCCGGTT CCCAAAGGCG
TGGCAGAGGA TGCCGTCTTA 751 ATCGAAAAGG CAAGGGCGAA ATATGCTGAG
TTGAGTTACA GCAAAAAAGG 801 TTTGCAGACC TTTTTCCTGG CAACCCTGCT
GATTGCCTCG CTGCTGTCGA 851 TTTTTCTTGC ACTGGTCATG GCACTGTATT
TCGCCCGCCG TTTCGTCGAA 901 CCCGTCCTAT CGCTTGCCGA GGGGGCGAAG
GCGGTGGCGC AAGGCGATTT 951 CAGCCAGACG CGCCCCGTGT TGCGCAACGA
CGAGTTCGGA CGCTTGACCA 1001 AGTTGTTCAA CCACATGACC GAGCAGCTTT
CCATCGCCAA AGAAGCAGAC 1051 GAGCGCAACC GCCGGCGCGA GGAAGCCGCC
AGACATTATC TCGAATGCGT 1101 GTTGGAGGGG CTGACCACGG GCGTGGTGGT
GTTTGACGAA CAAGGCTGTC 1151 TGAAAACCTT CAACAAAGCG GCGGAACAGA
TTTTGGGGAT GCCGCTTACC 1201 CCCCTGTGGG GCAGCAGCCG GCACGGTTGG
CACGGCGTTT CGGCGCAGCA 1251 GTCCCTGCTT GCCGAAGTGT TTGCCGCCAT
CGGCGCGGCG GCAGGTACGG 1301 ACAAACCGGT CCATGTGAAA TATGCCGCGC
CGGACGATGC CAAAATCCTG 1351 CTGGGCAAGG CAACCGTCCT GCCCGAAGAC
AACGGCAACG GCGTGGTAAT 1401 GGTGATTGAC GACATCACCG TTTTGATACA
CGCGCAAAAA GAAGCCGCGT 1451 GGGGCGAAGT GGCAAAACGG CTGGCACACG
AAATCCGCAA TCCGCTCACG 1501 CCCATCCAGC TTTCTGCCGA ACGGCTGGCG
TGGAAATTGG GCGGGAAGCT 1551 GGACGAGCAG GACGCGCAAA TCCTGACACG
TTCGACCGAC ACCATCATCA 1601 AACAAGTGGC GGCATTAAAA GAAATGGTCG
AGGCATTCCG CAATTACGCG 1651 CGTTCCCCTT CGCTCAAATT GGAAAATCAG
GATTTGAACG CCTTAATCGG 1701 CGATGTGTTG GCATTGTACG AAGCTGGTCC
GTGCCGGTTT GCGGCGGAAC 1751 TTGCCGGCGA ACCGCTGATG ATGGCGGCGG
ATACGACCGC CATGCGGCAG 1801 GTGCTGCACA ATATTTTCAA AAATGCCGCC
GAAGCGGCGG AAGAAGCCGA 1851 TGTGCCCGAA GTCAGGGTAA AATCGGAAGC
GGGGCAGGAC GGACGGATTG 1901 TCCTGACAGT TTGCGACAAC GGCAAGGGGT
TCGGCAGGGA AATGCTGCAC 1951 AATGCCTTCG AGCCGTATGT AACGGACAAA
CCGGCTGGAA CGGGATTGGG 2001 ACTGCCCGTG GTGAAAAAAA TCATTGAAGA
ACACGGCGGC CGCATCAGCC 2051 TGAGCAATCA GGATGCGGGC GGCGCGTGTG
TCAGAATCAT CTTGCCAAAA 2101 ACGGTAGAAA CTTATGCGTA G
This corresponds to the amino acid sequence <SEQ ID 1028; ORF
258.a>:
TABLE-US-01296 a258.pep 1 MRRFLPIAAI CAVVLLYGLT AATGSTSSLA
DYFWWIVAFS AMLLLVLSAV 51 LARYVILLLK DRRDGVFGSQ IAKRLSGMFT
LVAVLPGVFL FGVSAQFING 101 TINSWFGNDT HEALERSLNL SKSALNLAAD
NALGNAIPVQ IDLIGAASLP 151 GDMGRVLEHY AGSGFAQLAL YNAASGKIEK
SINPHKLDQP FPGKARWEKI 201 QQAGSVRDLE SIGGVLYAQG WLSAGTHNGR
DYALFFRQPV PKGVAEDAVL 251 IEKARAKYAE LSYSKKGLQT FFLATLLIAS
LLSIFLALVM ALYFARRFVE 301 PVLSLAEGAK AVAQGDFSQT RPVLRNDEFG
RLTKLFNHMT EQLSIAKEAD 351 ERNRRREEAA RHYLECVLEG LTTGVVVFDE
QGCLKTFNKA AEQILGMPLT 401 PLWGSSRHGW HGVSAQQSLL AEVFAAIGAA
AGTDKPVHVK YAAPDDAKIL 451 LGKATVLPED NGNGVVMVID DITVLIHAQK
EAAWGEVAKR LAHEIRNPLT 501 PIQLSAERLA WKLGGKLDEQ DAQILTRSTD
TIIKQVAALK EMVEAFRNYA 551 RSPSLKLENQ DLNALIGDVL ALYEAGPCRF
AAELAGEPLM MAADTTAMRQ 601 VLHNIFKNAA EAAEEADVPE VRVKSEAGQD
GRIVLTVCDN GKGFGREMLH 651 NAFEPYVTDK PAGTGLGLPV VKKIIEEHGG
RISLSNQDAG GACVRIILPK 701 TVETYA* m258/a258 99.0% identity in 584
aa overlap 10 20 30 40 50 60 m258.pep
MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLLLVLSAVLARYVILLLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLLLVLSAVLARYVILLLK 10 20
30 40 50 60 70 80 90 100 110 120 m258.pep
DRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTINSWFGNDTHEALERSLNL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
DRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTINSWFGNDTHEALERSLNL 70 80
90 100 110 120 130 140 150 160 170 180 m258.pep
SKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHYAGSGFAQLALYNAASGKIEK
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| a258
SKSALNLAADNALGNAIPVQIDLIGAASLPGDMGRVLEHYAGSGFAQLALYNAASGKIEK 130
140 150 160 170 180 190 200 210 220 230 240 m258.pep
SINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYAQGWLSAGTHNGRDYALFFRQPV
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| a258
SINPHKLDQPFPGKARWEKIQQAGSVRDLESIGGVLYAQGWLSAGTHNGRDYALFFRQPV 190
200 210 220 230 240 250 260 270 280 290 300 m258.pep
PKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLLIASLLSIFLALVMALYFARRFVE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
PKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLLIASLLSIFLALVMALYFARRFVE 250
260 270 280 290 300 310 320 330 340 350 360 m258.pep
PVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKLFNHMTEQLSIAKEADERNRRREEAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
PVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKLFNHMTEQLSIAKEADERNRRREEAA 310
320 330 340 350 360 370 380 390 400 410 420 m258.pep
RHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQILGMPLTPLWGSSRHGWHGVSAQQSLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
RHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQILGMPLTPLWGSSRHGWHGVSAQQSLL 370
380 390 400 410 420 430 440 450 460 470 480 m258.pep
AEVFAAIGAAAGTDKPVHVKYAAPDDAKILLGKATVLPEDNGNGVVMVIDDITVLIHAQK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a258
AEVFAAIGAAAGTDKPVHVKYAAPDDAKILLGKATVLPEDNGNGVVMVIDDITVLIHAQK 430
440 450 460 470 480 490 500 510 520 530 540 m258.pep
EAAWGEVAKRLAHEIRNPLTPIQLSAERXAXKLGGKLDEQDAQILTRSTDTIVKQVAALK
|||||||||||||||||||||||||||| | |||||||||||||||||||||:||||||| a258
EAAWGEVAKRLAHEIRNPLTPIQLSAERLAWKLGGKLDEQDAQILTRSTDTIIKQVAALK 490
500 510 520 530 540 550 560 570 580 589 m258.pep
EMVEAFRNYARSPSLKLENQDLNALIGDVLALYEAGPCRFAADLPANRX
||||||||||||||||||||||||||||||||||||||||||:| a258
EMVEAFRNYARSPSLKLENQDLNALIGDVLALYEAGPCRFAAELAGEPLMMAADTTAMRQ 550
560 570 580 590 600 a258
VLHNIFKNAAEAAEEADVPEVRVKSEAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDK 610
620 630 640 650 660
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1029>:
TABLE-US-01297 g259.seq 1 atgatgatgc acgcttctgt ccaaagtcgt
ttcgcaccga tactttatgt 51 tttgattttc tttgccggtt ttttgaccgc
gcaaatctgg ttcaatcaga 101 aagcctatac tgaagagctg cctccgcttc
tgtccgcatt gtccgccgtc 151 gcgctggtgt ggctggcgtg ggcgttcgtg
tcggtgcgtt caaaggctaa 201 ggcagaaaag ttctaccgcg aaaaaatgat
acagaacgaa agcatacacc 251 ccgtcctgca cgcttctttg caacacttgg
aacacaagcc gcaaatgctc 301 gccctgctgg tcaaaaacca cggcaaaggc
atggcggaac aggtcaggtt 351 caaggcggaa gtgctgcccg acgacgaaga
cgcgcgcacg attgccgccg 401 agttggcaaa aatggatatg ttcgcattgg
ggacggacgc ggtcgcctcg 451 ggcgaaacct atgggcgcgt gttcgccgat
attttcgagt tgtcggcggc 501 tttggaaagg cgcgcgttca aagggatact
gaaactgacg gcggaatata 551 aaaaacatct tcggcgatgc ctgccgttcg
gaaacggcgt tggatttggg 601 cgcgctcaat caggcgttga gggaaatctc
gaaaacgccg gaaaagccta 651 a
This corresponds to the amino acid sequence <SEQ ID 1030; ORF
259.ng>:
TABLE-US-01298 g259.pep 1 MMMHASVQSR FAPILYVLIF FAGFLTAQIW
FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SVRSKAKAEK FYREKMIQNE
SIHPVLHASL QHLEHKPQML 101 ALLVKNHGKG MAEQVRFKAE VLPDDEDART
IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSAALER RAFKGILKLT
AEYKKHLRRC LPFGNGVGFG 201 RAQSGVEGNL ENAGKA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1031>:
TABLE-US-01299 m259.seq (partial) 1 ATGATGATGC ACGCTTCTGT
CCAAAGCCGT TTCGCACCGA TACTTTATGT 51 TTTGATTTTC TTTGCCGGTT
TTTTGACCGC GCAAATCTGG TTCAATCAGA 101 AAGCCTATAC TGAAGAGCTG
CCTCCGCTTC TGTCCGCATT GTCCGCCGTC 151 GCGCTGGTGT GGCTGGCGTG
GGCGTTCGTG TCGGCGCGTT CAAAGGCCAA 201 GGCGGAAAAG TTCTACCGCG
AAAAAATGAT ACAGAACGAA AGCATACACC 251 CCGTCsTGCA CGCCTCTTTG
CAACACTTGG AACACAAGCC GCAAATACTC 301 GCCCTGCTGG TCAAAAACCA
CGGCAAAGGG ATGGCGGAAC AGGTCAGGTT 351 CAAGGCGGAA GTGCTGCCCG
ACGACGAAGA CGCGCGCACG ATTGCCGCCG 401 AGTTGGCAAA AATGGATATG
TTCGCATTGG GGACkGACGC GGTCGCCTCG 451 GGCGAAACCT ATGGACGCGT
GTTCGCCGAT ATTTTCGAGT TGTCGGmGGC 501 TTTGGAAGGG CGCGCGTTCA
AAGGAATGTT GAAACTGACG GCGGAATATA 551 AA.AACATCT TCGGmGATGC
CTGCCGTTCG GAAACGGCGT TGGAGTTGGG 601 CGCACTCAAT CAGGCGTTGC
AGGAGATTTC AAAAACATCC GG..
This corresponds to the amino acid sequence <SEQ ID 1032; ORF
259>:
TABLE-US-01300 m259.pep (partial) 1 MMMHASVQSR FAPILYVLIF
FAGFLTAQIW FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SARSKAKAEK
FYREKMIQNE SIHPVXHASL QHLEHKPQIL 101 ALLVKNHGKG MAEQVRFKAE
VLPDDEDART IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSXALEG
RAFKGMLKLT AEYKXHLRRC LPFGNGVGVG 201 RTQSGVAGDF KNIR..
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 259
shows 94.3% identity over a 212 aa overlap with a predicted ORF
(ORF 259.ng) from N. gonorrhoeae:
TABLE-US-01301 m259/g259 10 20 30 40 50 60 m259.pep
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g259
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV 10 20
30 40 50 60 70 80 90 100 110 120 m259.pep
SARSKAKAEKFYREKMIQNESIHPVXHASLQHLEHKPQILALLVKNHGKGMAEQVRFKAE
|:||||||||||||||||||||||| ||||||||||||:||||||||||||||||||||| g259
SVRSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAE 70 80
90 100 110 120 130 140 150 160 170 180 m259.pep
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSXALEGRAFKGMLKLT
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||:|||| g259
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALERRAFKGILKLT 130
140 150 160 170 180 190 200 210 m259.pep
AEYKKHLRRCLPFGNGVGVGRTQSGVAGDFKNIR |||||||||||||||||| ||:|||| |:::|
g259 AEYKKHLRRCLPFGNGVGFGRAQSGVEGNLENAGKAX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1033>:
TABLE-US-01302 a259.seq (partial) 1 ATGATGATGC ACGCTTCTGT
CCAAAGCCGT TTCGCACCGA TACTTTATGT 51 TTTGATTTTC TTTGCCGGTT
TTTTGACCGC GCAAATCTGG TTCAATCAGA 101 AAGCCTATAC TGAAGAGCTG
CCTCCGCTTC TGTCCGCATT GTCCGCCGTC 151 GCGCTGGTGT GGCTGGCGTG
GGCGTTCGTG TCGGCGCGTT CAAAGGCTAA 201 GGCGGAAAAG TTCTACCGCG
AAAAAATGAT ACAGAACGAA AGCATACACC 251 CCGTCCTGCA CGCTTCTTTG
CAACACTTGG AACACAAGCC GCAAATGCTC 301 GCCCTGCTGG TCAAAAACCA
CGGCAAAGGG ATGGCGGAAC AGGTCAGGTT 351 CAAGGCGGAA GTGCTGCCCG
ACGACGAAGA CGCGCGCACG ATTGCCGCCG 401 AGTTGGCAAA AATGGATATG
TTTGCATTGG GGACGGACGC GGTCGCCTCG 451 GGCGAAACCT ATGGACGCGT
GTTCGCCGAT ATTTTCGAGT TGTCGGCGGC 501 TTTGGAAGGG CGCGCGTTCA
AAGGAATGTT GAAACTGACG GCGGAATATA 551 AAAA.CATCT TCGGCGATGC
CTGCCGTTCG GAAACGGCGT TGGAGTTGGG 601 CGCGCTCAAT CAGGCGTTGC
AGGAGATTTC AAAAACATCG GAAAAGTCCA 651 A
This corresponds to the amino acid sequence <SEQ ID 1034; ORF
259.a>:
TABLE-US-01303 a259.pep (partial) 1 MMMHASVQSR FAPILYVLIF
FAGFLTAQIW FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SARSKAKAEK
FYREKMIQNE SIHPVLHASL QHLEHKPQML 101 ALLVKNHGKG MAEQVRFKAE
VLPDDEDART IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSAALEG
RAFKGMLKLT AEYKXHLRRC LPFGNGVGVG 201 RAQSGVAGDF KNIGKVQ m259/a259
98.1% identity in 213 aa overlap 10 20 30 40 50 60 m259.pep
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a259
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV 10 20
30 40 50 60 70 80 90 100 110 120 m259.pep
SARSKAKAEKFYREKMIQNESIHPVXHASLQHLEHKPQILALLVKNHGKGMAEQVRFKAE
||||||||||||||||||||||||| ||||||||||||:||||||||||||||||||||| a259
SARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAE 70 80
90 100 110 120 130 140 150 160 170 180 m259.pep
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSXALEGRAFKGMLKLT
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| a259
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLT 130
140 150 160 170 180 190 200 210 m259.pep
AEYKXHLRRCLPFGNGVGVGRTQSGVAGDFKNIR
|||||||||||||||||||||:||||||||||| a259
AEYKXHLRRCLPFGNGVGVGRAQSGVAGDFKNIGKVQ 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1035>:
TABLE-US-01304 g259-1.seq 1 ATGATGATGC ACGCTTCTGT CCAAAGTCGT
TTCGCACCGA TACTTTATGT 51 TTTGATTTTC TTTGCCGGTT TTTTGACCGC
GCAAATCTGG TTCAATCAGA 101 AAGCCTATAC TGAAGAGCTG CCTCCGCTTC
TGTCCGCATT GTCCGCCGTC 151 GCGCTGGTGT GGCTGGCGTG GGCGTTCGTG
TCGGTGCGTT CAAAGGCTAA 201 GGCAGAAAAG TTCTACCGCG AAAAAATGAT
ACAGAACGAA AGCATACACC 251 CCGTCCTGCA CGCTTCTTTG CAACACTTGG
AACACAAGCC GCAAATGCTC 301 GCCCTGCTGG TCAAAAACCA CGGCAAAGGC
ATGGCGGAAC AGGTCAGGTT 351 CAAGGCGGAA GTGCTGCCCG ACGACGAAGA
CGCGCGCACG ATTGCCGCCG 401 AGTTGGCAAA AATGGATATG TTCGCATTGG
GGACGGACGC GGTCGCCTCG 451 GGCGAAACCT ATGGGCGCGT GTTCGCCGAT
ATTTTCGAGT TGTCGGCGGC 501 TTTGGAA
This corresponds to the amino acid sequence <SEQ ID 1036; ORF
259-1.ng>:
TABLE-US-01305 g259-1.pep 1 MMMHASVQSR FAPILYVLIF FAGFLTAQIW
FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SVRSKAKAEK FYREKMIQNE
SIHPVLHASL QHLEHKPQML 101 ALLVKNHGKG MAEQVRFKAE VLPDDEDART
IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSAALE
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1037>:
TABLE-US-01306 m259-1.seq 1 ATGATGATGC ACGCTTCTGT CCAAAGCCGT
TTCGCACCGA TACTTTATGT 51 TTTGATTTTC TTTGCCGGTT TTTTGACCGC
GCAAATCTGG TTCAATCAGA 101 AAGCCTATAC TGAAGAGCTG CCTCCGCTTC
TGTCCGCATT GTCCGCCGTC 151 GCGCTGGTGT GGCTGGCGTG GGCGTTCGTG
TCGGCGCGTT CAAAGGCCAA 201 GGCGGAAAAG TTCTACCGCG AAAAAATGAT
ACAGAACGAA AGCATACACC 251 CCGTCCTGCA CGCCTCTTTG CAACACTTGG
AACACAAGCC GCAAATACTC 301 GCCCTGCTGG TCAAAAACCA CGGCAAAGGG
ATGGCGGAAC AGGTCAGGTT 351 CAAGGCGGAA GTGCTGCCCG ACGACGAAGA
CGCGCGCACG ATTGCCGCCG 401 AGTTGGCAAA AATGGATATG TTCGCATTGG
GGACGGACGC GGTCGCCTCG 451 GGCGAAACCT ATGGACGCGT GTTCGCCGAT
ATTTTCGAGT TGTCGGCGGC 501 TTTGGAAGGG CGCGCGTTCA AAGGAATGTT
GAAACTGACG GCGGAATATA 551 AAAACATCTT CGGCGATGCC TGCCGTTCGG
AAACGGCGTT GGAGTTGGGC 601 GCACTCAATC AGGCGTTGCA GGAGATTTCA
AAAACATCGG AAAAGTCCAA 651 ACGGATATTT TATTGA
This corresponds to the amino acid sequence <SEQ ID 1038; ORF
259-1>:
TABLE-US-01307 m259-1.pep 1 MMMHASVQSR FAPILYVLIF FAGFLTAQIW
FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SARSKAKAEK FYREKMIQNE
SIHPVLHASL QHLEHKPQIL 101 ALLVKNHGKG MAEQVRFKAE VLPDDEDART
IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSAALEG RAFKGMLKLT
AEYKNIFGDA CRSETALELG 201 ALNQALQEIS KTSEKSKRIF Y* g259-1/m259-1
98.8% identity in 169 aa overlap 10 20 30 40 50 60 g259-1.pep
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m259-1
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV 10 20
30 40 50 60 70 80 90 100 110 120 g259-1.pep
SVRSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAE
|:||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m259-1
SARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQILALLVKNHGKGMAEQVRFKAE 70 80
90 100 110 120 130 140 150 160 169 g259-1.pep
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALE
||||||||||||||||||||||||||||||||||||||||||||||||| m259-1
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLT 130
140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1039>:
TABLE-US-01308 a259-1.seq 1 ATGATGATGC ACGCTTCTGT CCAAAGCCGT
TTCGCACCGA TACTTTATGT 51 TTTGATTTTC TTTGCCGGTT TTTTGACCGC
GCAAATCTGG TTCAATCAGA 101 AAGCCTATAC TGAAGAGCTG CCTCCGCTTC
TGTCCGCATT GTCCGCCGTC 151 GCGCTGGTGT GGCTGGCGTG GGCGTTCGTG
TCGGCGCGTT CAAAGGCTAA 201 GGCGGAAAAG TTCTACCGCG AAAAAATGAT
ACAGAACGAA AGCATACACC 251 CCGTCCTGCA CGCTTCTTTG CAACACTTGG
AACACAAGCC GCAAATGCTC 301 GCCCTGCTGG TCAAAAACCA CGGCAAAGGG
ATGGCGGAAC AGGTCAGGTT 351 CAAGGCGGAA GTGCTGCCCG ACGACGAAGA
CGCGCGCACG ATTGCCGCCG 401 AGTTGGCAAA AATGGATATG TTTGCATTGG
GGACGGACGC GGTCGCCTCG 451 GGCGAAACCT ATGGACGCGT GTTCGCCGAT
ATTTTCGAGT TGTCGGCGGC 501 TTTGGAAGGG CGCGCGTTCA AAGGAATGTT
GAAACTGACG GCGGAATATA 551 AAAACATCTT CGGCGATGCC TGCCGTTCGG
AAACGGCGTT GGAGTTGGGC 601 GCGCTCAATC AGGCGTTGCA GGAGATTTCA
AAAACATCGG AAAAGTCCAA 651 ACGGATATTT TATTGA
This corresponds to the amino acid sequence <SEQ ID 1040; ORF
259-1.a>:
TABLE-US-01309 a259-1.pep 1 MMMHASVQSR FAPILYVLIF FAGFLTAQIW
FNQKAYTEEL PPLLSALSAV 51 ALVWLAWAFV SARSKAKAEK FYREKMIQNE
SIHPVLHASL QHLEHKPQML 101 ALLVKNHGKG MAEQVRFKAE VLPDDEDART
IAAELAKMDM FALGTDAVAS 151 GETYGRVFAD IFELSAALEG RAFKGMLKLT
AEYKNIFGDA CRSETALELG 201 ALNQALQEIS KTSEKSKRIF Y* a259-1/m259-1
99.5% identity in 221 aa overlap 10 20 30 40 50 60 a259-1.pep
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m259-1
MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLLSALSAVALVWLAWAFV 10 20
30 40 50 60 70 80 90 100 110 120 a259-1.pep
SARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLALLVKNHGKGMAEQVRFKAE
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m259-1
SARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQILALLVKNHGKGMAEQVRFKAE 70 80
90 100 110 120 130 140 150 160 170 180 a259-1.pep
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m259-1
VLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFADIFELSAALEGRAFKGMLKLT 130
140 150 160 170 180 190 200 210 220 a259-1.pep
AEYKNIFGDACRSETALELGALNQALQEISKTSEKSKRIFYX
|||||||||||||||||||||||||||||||||||||||||| m259-1
AEYKNIFGDACRSETALELGALNQALQEISKTSEKSKRIFYX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1041>:
TABLE-US-01310 g260.seq 1 atgggtgcgg gtgtagtatt cgttgtcttt
cagccgttct tcagcctgtt 51 tcgagcgttg ttcgagggcg gagtcggtat
agtcgaggga gcgcacgatg 101 ccgctgaatg cgacttcttg tccgaggaat
ttacccgtat ccggatcggt 151 gatgttttta ttgattcggt aggtcagata
acggcccggt tctttcaggc 201 ctttggtgta aaccctggcg cctttggtgt
acagcagcct gccttccggg 251 cccgagagca ggcgcggcgc ggcagcggtt
tctttgcggg aaacgatttg 301 cgggtgctgc ataaagacgc ggtagaagtt
gacatcgatg gcgggaatac 351 cgtatccgga cacttcctta tccggactga
ttttgacgac ggggatgccg 401 tctgtctgtt ccaagccgag gcgcggttcg
ccgccaacgt agcgcaacac 451 caatacctgg cccggataaa tcaggtcggg
attgtggatt tgatcccggt 501 tcgcgcccca caggggggga ccattgccac
gggctgtaca ggtatttgcc 551 cgaaataccc cacagggtgt cgccctgttt ga
This corresponds to the amino acid sequence <SEQ ID 1042; ORF
260.ng>:
TABLE-US-01311 g260.pep 1 MGAGVVFVVF QPFFSLFRAL FEGGVGIVEG
AHDAAECDFL SEEFTRIRIG 51 DVFIDSVGQI TARFFQAFGV NPGAFGVQQP
AFRAREQARR GSGFFAGNDL 101 RVLHKDAVEV DIDGGNTVSG HFLIRTDFDD
GDAVCLFQAE ARFAANVAQH 151 QYLARINQVG IVDLIPVRAP QGGTIATGCT
GICPKYPTGC RPV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1043>:
TABLE-US-01312 m260.seq 1 ATGGGTGCGG GTATGGTATT CGTTGTCTTT
CGGCCGTTCT CCAGCCTGTT 51 TCGAGCGTTG TTCGAGGACA GAGTCGGTAT
AGTCGAGGGA GCGCACGATG 101 CCGCTGAATG CGACTTCCTG CCCGAGGAAT
TTACCCGTAT CCGGATCGGT 151 GATGTTTTTA TTGATTCGGT AGGTCAGGTA
GCGGCCCGGC TCTTTCAGGC 201 CTTTGGTGTA AACCCTGGTG CCTTTGGTGT
ACAGCAGCCT GCCTTCCGGG 251 CCCGAGwrCA sGCGCGGyGC GGCAGCGGTT
TCTTTGCGGG AAACGATTTG 301 CGGATGCCGC ATAAAGATGC GGTAGAAGTT
GACATCGATG GCGGGAATAC 351 CGTATCCGGA CACTTCCTTA TCCGGACTCA
TTTTGACGAC GGGGATGCCG 401 TCTGTCTGTT CCAAGCCGAG GCGCGGTTCG
CCGTCAACGT GGCGCAACAC 451 CAATACCTGG TCCGGATAAA TCAGGTCGGG
ATTGTGGATT TGATCCCGGT 501 TCGCGTyCCA CAG
This corresponds to the amino acid sequence <SEQ ID 1044; ORF
260>:
TABLE-US-01313 m260.pep 1 MGAGMVFVVF RPFSSLFRAL FEDRVGIVEG
AHDAAECDFL PEEFTRIRIG 51 DVFIDSVGQV AARLFQAFGV NPGAFGVQQP
AFRARXXARX GSGFFAGNDL 101 RMPHKDAVEV DIDGGNTVSG HFLIRTHFDD
GDAVCLFQAE ARFAVNVAQH 151 QYLVRINQVG IVDLIPVRVP Q
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 260
shows 89.5% identity over a 171 aa overlap with a predicted ORF
(ORF 260.ng) from N. gonorrhoeae:
TABLE-US-01314 m260/g260 10 20 30 40 50 60 m260.pep
MGAGMVFVVFRPFSSLFRALFEDRVGIVEGAHDAAECDFLPEEFTRIRIGDVFIDSVGQV
||||:|||||:|| |||||||| |||||||||||||||| ||||||||||||||||||: g260
MGAGVVFVVFQPFFSLFRALFEGGVGIVEGAHDAAECDFLSEEFTRIRIGDVFIDSVGQI 10 20
30 40 50 60 70 80 90 100 110 120 m260.pep
AARLFQAFGVNPGAFGVQQPAFRARXXARXGSGFFAGNDLRMPHKDAVEVDIDGGNTVSG
:||:||||||||||||||||||||| || |||||||||||: ||||||||||||||||| g260
TARFFQAFGVNPGAFGVQQPAFRAREQARRGSGFFAGNDLRVLHKDAVEVDIDGGNTVSG 70 80
90 100 110 120 130 140 150 160 170 m260.pep
HFLIRTHFDDGDAVCLFQAEARFAVNVAQHQYLVRINQVGIVDLIPVRVPQ ||||||
|||||||||||||||||:||||||||:||||||||||||||:|| g260
HFLIRTDFDDGDAVCLFQAEARFAANVAQHQYLARINQVGIVDLIPVRAPQGGTIATGCT 130
140 150 160 170 180 g260 GICPKYPTGCRPV 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1045>:
TABLE-US-01315 a260.seq 1 ATGGGTGCGG GTATGGTATT CGTTGTCTTT
CGGCCGTTCT CCAGCCTGTT 51 TCGAGCGTTG TTCGAGGACA GAGTCGGTAT
AGTCGAGGGA GCGCACGATG 101 CCGCTGAATG CGACTTCCTG CCCGAGGAAT
TTACCCGTAT CCGGATCGGT 151 GATGTTTTTA TTGATTCGGT AGGTCAGGTA
GCGGCCCGGC TCTTTCAGGC 201 CTTTGGTGTA AACCCTGGTG CCTTTGGTGT
ACAGCAGCCT GCCTTCCGGG 251 CCCGAGAGCA GGCGCGGCGC GGCAGCGGTT
TCTTTGCGGG AAACGATTTG 301 CGGGTGCCGC ATAAAGATGC GGTAGAAGTT
GACATCGATG GCGGGAATAC 351 CGTATCCGGA CACTTCCTTA TCCGGACTCA
TTTTGACGAC GGGGATGCCG 401 TCTGTCTGTT CCAAGCCGAG GCGCGGTTCG
CCGTCAACGT GGCGCAACAC 451 CAATACCTGG TCCAGATAAA TCAGGTCGGG
ATTGTGGATT TGATCCCGGT 501 TCGCGTCCCA CAGGCGGCC. CCATTGCCAC
GGGCTGTACA GGTATTTGCC 551 CGAAATGCCC CACAGGGTGT CGCCCTGTTT GA
This corresponds to the amino acid sequence <SEQ ID 1046; ORF
260.a>:
TABLE-US-01316 a260.pep 1 MGAGMVFVVF RPFSSLFRAL FEDRVGIVEG
AHDAAECDFL PEEFTRIRIG 51 DVFIDSVGQV AARLFQAFGV NPGAFGVQQP
AFRAREQARR GSGFFAGNDL 101 RVPHKDAVEV DIDGGNTVSG HFLIRTHFDD
GDAVCLFQAE ARFAVNVAQH 151 QYLVQINQVG IVDLIPVRVP QAAXIATGCT
GICPKCPTGC RPV* m260/a260 97.1% identity in 171 aa overlap 10 20 30
40 50 60 m260.pep
MGAGMVFVVFRPFSSLFRALFEDRVGIVEGAHDAAECDFLPEEFTRIRIGDVFIDSVGQV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a260
MGAGMVFVVFRPFSSLFRALFEDRVGIVEGAHDAAECDFLPEEFTRIRIGDVFIDSVGQV 10 20
30 40 50 60 70 80 90 100 110 120 m260.pep
AARLFQAFGVNPGAFGVQQPAFRARXXARXGSGFFAGNDLRMPHKDAVEVDIDGGNTVSG
||||||||||||||||||||||||| || |||||||||||:|||||||||||||||||| a260
AARLFQAFGVNPGAFGVQQPAFRAREQARRGSGFFAGNDLRVPHKDAVEVDIDGGNTVSG 70 80
90 100 110 120 130 140 150 160 170 m260.pep
HFLIRTHFDDGDAVCLFQAEARFAVNVAQHQYLVRINQVGIVDLIPVRVPQ
||||||||||||||||||||||||||||||||||:|||||||||||||||| a260
HFLIRTHFDDGDAVCLFQAEARFAVNVAQHQYLVQINQVGIVDLIPVRVPQAAXIATGCT 130
140 150 160 170 180 a260 GICPKCPTGCRPVX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1047>:
TABLE-US-01317 g261.seq 1 atggagcttg ggcatatcgt attccttgtg
ctttgcgcgc gttcagacgg 51 cctttttact ttccagacat tccgccagcc
cgcgttcgcg caagatacag 101 ctcgggcatt cgcggcagcc gccgacgata
cccttgtagc aggtgtgggt 151 ctgttcgcgg atgtagtcca acacgcccat
ttcgtccgcc aacgcccacg 201 tttgcgcctt ggtcaggtac atcagcggcg
tgtggatttg aaaatcgtag 251 tccatcgcca gattaagggt aacgttcatg
gatttgacga acacgccgcg 301 gcagtcggga tagcccgaaa aatcggtttc
gcacacgccc gcgatgatgt 351 gccggatacc ctgccctttg gcaaaaatgg
cggcgtaaag caggaaaagc 401 gcgttacgcc cgtccacaaa ggtattggga
acgccgttgt cggcggtttc 451 gatggcggcg gtttcgatgg cggcggtttc
gtccatcagg gcgttgtgcg 501 taatctgccg catcaggctc aaatcgagta
cggtttgact gacacccaaa 551 tcctgcgcga tccactctgc gcgttccagc
tcgacggcat ggcgttgccc 601 gtatcggaag gtgatggctt ggacgttttc
gcgcccgtag gtttggattg 651 cctgaatcag gcaggtggtc gaatcctgac
cgcccgagaa gatgaccaag 701 gctttttggt ttga
This corresponds to the amino acid sequence <SEQ ID 1048; ORF
261.ng>:
TABLE-US-01318 g261.pep 1 MELGHIVFLV LCARSDGLFT FQTFRQPAFA
QDTARAFAAA ADDTLVAGVG 51 LFADVVQHAH FVRQRPRLRL GQVHQRRVDL
KIVVHRQIKG NVHGFDEHAA 101 AVGIARKIGF AHARDDVPDT LPFGKNGGVK
QEKRVTPVHK GIGNAVVGGF 151 DGGGFDGGGF VHQGVVRNLP HQAQIEYGLT
DTQILRDPLC AFQLDGMALP 201 VSEGDGLDVF APVGLDCLNQ AGGRILTARE
DDQGFLV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1049>:
TABLE-US-01319 m261.seq 1 ATGGAGCTTG GGCATATCGT ATTCCTTATG
GTTTGCGCGT GTTCAGACGG 51 CCTTTTTACT TTCCAGATAT TCCGCCAGCC
cGcGTTCGCG CAAGATACAG 101 CTCGGGCATT CGCGgCAGCC GCCGACGATG
CCGTTATAGC AGGTGTGGGT 151 TTGCTCGCGG ATATAGTCCA GCACGCCCAT
TTCGTCCGCC AACGCCCACG 201 TTTGCGCCTT GGTCAGATAC ATCAGCGGCG
TGTGGATTTG AAAATCATAG 251 TCCATCGCCA AATTAAGGGT AACGTTCATC
GATTTGACAA ACACGTCGCG 301 GCAGTCGGGA TAGCCGGAGA AGTCGGTTTC
GCACACGCCC GCGATGATGT 351 GCCGTATCCC CTGCCCTTTG GCGTAAATCG
CGGCATAGAG CAGGAAAAGC 401 gCGTTGCGGC CGTCTACAAA GGTATTCGGA
ACGCCGTTTT CGGCAGTTTC 451 GATGGCGGCG GTGTCGTCCA TCAGGGCATT
GTGCGTAATC TGCCGCATCA 501 GgCTcAAGTC GAGTACGGTT TGTTTGACGC
CCAAATCCTG CGCAATCCAG 551 CGGGCACGTT CCAGCTCGAC GGCATGGCGT
TGCCCGTATT GGAAAGTAAT 601 GGCTTGGACG TTTTCGCGCC CGTAGGTTTG
GATTGCCTGA ATCAGGCAGG 651 TGGTCGAATC CTGACCGCCC GAAAAGATGA
CCAAGGCTTG TTGGTTTGA
This corresponds to the amino acid sequence <SEQ ID 1050; ORF
261>:
TABLE-US-01320 m261.pep 1 MELGHIVFLM VCACSDGLFT FQIFRQPAFA
QDTARAFAAA ADDAVIAGVG 51 LLADIVQHAH FVRQRPRLRL GQIHQRRVDL
KIIVHRQIKG NVHRFDKHVA 101 AVGIAGEVGF AHARDDVPYP LPFGVNRGIE
QEKRVAAVYK GIRNAVFGSF 151 DGGGVVHQGI VRNLPHQAQV EYGLFDAQIL
RNPAGTFQLD GMALPVLESN 201 GLDVFAPVGL DCLNQAGGRI LTARKDDQGL LV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 261
shows 79.7% identity over a 237 aa overlap with a predicted ORF
(ORF 261.ng) from N. gonorrhoeae:
TABLE-US-01321 m261/g261 10 20 30 40 50 60 m261.pep
MELGHIVFLMVCACSDGLFTFQIFRQPAFAQDTARAFAAAADDAVIAGVGLLADIVQHAH
|||||||||::|| |||||||| ||||||||||||||||||||:::|||||:||:||||| g261
MELGHIVFLVLCARSDGLFTFQTFRQPAFAQDTARAFAAAADDTLVAGVGLFADVVQHAH 10 20
30 40 50 60 70 80 90 100 110 120 m261.pep
FVRQRPRLRLGQIHQRRVDLKIIVHRQIKGNVHRFDKHVAAVGIAGEVGFAHARDDVPYP
||||||||||||:|||||||||:|||||||||| ||:|:|||||| ::|||||||||| g261
FVRQRPRLRLGQVHQRRVDLKIVVHRQIKGNVHGFDEHAAAVGIARKIGFAHARDDVPDT 70 80
90 100 110 120 130 140 150 160 170 m261.pep
LPFGVNRGIEQEKRVAAVYKGIRNAVFGSFDGGGV-----VHQGIVRNLPHQAQVEYGLF |||| |
|::|||||: |:||| ||| |:||||| ||||:|||||||||:|||| g261
LPFGKNGGVKQEKRVTPVHKGIGNAVVGGFDGGGFDGGGFVHQGVVRNLPHQAQIEYGLT 130
140 150 160 170 180 180 190 200 210 220 230 m261.pep
DAQILRNPAGTFQLDGMALPVLESNGLDVFAPVGLDCLNQAGGRILTARKDDQGLLVX |:||||:|
:|||||||||| |::||||||||||||||||||||||||:||||:||| g261
DTQILRDPLCAFQLDGMALPVSEGDGLDVFAPVGLDCLNQAGGRILTAREDDQGFLVX 190 200
210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1051>:
TABLE-US-01322 a261.seq 1 ATGGAGCTTG GGCATATCGT ATTCCTTATG
GTTTGCGCGT GTTCAGACGG 51 CCTTTTTACT TTCCAGATAT TCCGCCAGCC
CGCGTTCGCG CAAGATACAG 101 CTCGGGCATT CGCGGCAGCC GCCGACGATG
CCGTTATAGC AGGTGTGGGT 151 TTGCTCGCGG ATATAGTCCA GCGCGCCCAT
TTCGTCCGCC AACGCCCAAG 201 TTTGCGCCTT GGTCAGATAC ATCAGCGGCG
TGTGGATTTG AAAATCATAG 251 TCCATCGCCA GATTAAGGGT AACGTTCATG
GATTTGACAA ACACGTCACG 301 GCAGTCGGGA TAGCCGGAGA AGTCGGTTTC
GCACACGCCC GCGATGATGT 351 GCCGTATCCC CTGCCCTTTG GCGTAAATCG
CGGCATAGAG CAGGAAAAGC 401 GCGTTGCGGC CGTCTACAAA GGTATTCGGA
ACGCCGTTTT CGGCAGTTTC 451 GATGGCGGCG GTGTCGTCCA TCAGGGCATT
GTGCGTAATC TGCCGCATCA 501 GGCTCAAGTC GAGTACGGTT TGTTTGACGC
CCAAATCCTG CGCAATCCAG 551 CGGGCACGTT CCAGCTCGAC GGCATGGCGT
TGCCCGTATT GGAAAGTAAT 601 GGCTTGGACG TTTTCGCGCC CGTAGGTTTG
GATTGCCTGA ATCAGGCAGG 651 TGGTCGAATC CTGACCGCCC GAAAAGATGA
CCAAGGCTTT TTGGTTTGA
This corresponds to the amino acid sequence <SEQ ID 1052; ORF
261.a>:
TABLE-US-01323 a261.pep 1 MELGHIVFLM VCACSDGLFT FQIFRQPAFA
QDTARAFAAA ADDAVIAGVG 51 LLADIVQRAH FVRQRPSLRL GQIHQRRVDL
KIIVHRQIKG NVHGFDKHVT 101 AVGIAGEVGF AHARDDVPYP LPFGVNRGIE
QEKRVAAVYK GIRNAVFGSF 151 DGGGVVHQGI VRNLPHQAQV EYGLFDAQIL
RNPAGTFQLD GMALPVLESN 201 GLDVFAPVGL DCLNQAGGRI LTARKDDQGF LV*
m261/a261 97.8% identity in 232 aa overlap 10 20 30 40 50 60
m261.pep
MELGHIVFLMVCACSDGLFTFQIFRQPAFAQDTARAFAAAADDAVIAGVGLLADIVQHAH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a261
MELGHIVFLMVCACSDGLFTFQIFRQPAFAQDTARAFAAAADDAVIAGVGLLADIVQRAH 10 20
30 40 50 60 70 80 90 100 110 120 m261.pep
FVRQRPRLRLGQIHQRRVDLKIIVHRQIKGNVHRFDKHVAAVGIAGEVGFAHARDDVPYP ||||||
|||||||||||||||||||||||||| |||||:|||||||||||||||||||| a261
FVRQRPSLRLGQIHQRRVDLKIIVHRQIKGNVHGFDKHVTAVGIAGEVGFAHARDDVPYP 70 80
90 100 110 120 130 140 150 160 170 180 m261.pep
LPFGVNRGIEQEKRVAAVYKGIRNAVFGSFDGGGVVHQGIVRNLPHQAQVEYGLFDAQIL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a261
LPFGVNRGIEQEKRVAAVYKGIRNAVFGSFDGGGVVHQGIVRNLPHQAQVEYGLFDAQIL 130
140 150 160 170 180 190 200 210 220 230 m261.pep
RNPAGTFQLDGMALPVLESNGLDVFAPVGLDCLNQAGGRILTARKDDQGLLVX
|||||||||||||||||||||||||||||||||||||||||||||||||:||| a261
RNPAGTFQLDGMALPVLESNGLDVFAPVGLDCLNQAGGRILTARKDDQGFLVX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1053>:
TABLE-US-01324 g263.seq 1 atggcacgtt taaccgtaca caccctcgaa
accgcccccg aagccgccaa 51 accgcgcgta gaggccgtac ccaaaaacaa
cggctttatc cccaacctca 101 tcggcgtatt ggcaaacgcc cccgaagctt
tggcgtttta ccaagaagtc 151 ggcaagctca acgccgccaa cagcctgacc
gccggcgaag tcgaagtgat 201 ccggatcatc gccgtccgca ccaaccaatg
cagcttctgc gtggcagggc 251 acaccaaact cgcaaccctg aaaaaactcc
tgtccgagca atccctcaat 301 gccgcccgcg ctttggcggc aggtaaatct
gacgatgcca aactcggcgc 351 gcttgccgcc ttcacccaag ccgtaatggc
gaaaaaaggc gcagtatccg 401 acgacgaact caacgccttc ctcgaagcgg
gctacaaccg gcagcaggca 451 gtcgaagtcg taatgggcgt agccttggca
actttgtgca actacgccaa 501 caacctcgcc caaaccgaaa tcaaccccaa
attgcaggca tacgcctaa
This corresponds to the amino acid sequence <SEQ ID 1054; ORF
263.ng>:
TABLE-US-01325 g263.pep 1 MARLTVHTLE TAPEAAKPRV EAVPKNNGFI
PNLIGVLANA PEALAFYQEV 51 GKLNAANSLT AGEVEVIRII AVRTNQCSFC
VAGHTKLATL KKLLSEQSLN 101 AARALAAGKS DDAKLGALAA FTQAVMAKKG
AVSDDELNAF LEAGYNRQQA 151 VEVVMGVALA TLCNYANNLA QTEINPKLQA YA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1055>:
TABLE-US-01326 m263.seq (partial) 1 ..GCAGCAGGCG AATTTGACGA
TGCCAAACTC GGCGCGCTCG CCGCCTTCAC 51 CCAAGCCGTA ATGGCGAAAA
AAGGCGCGGT ATCCGACGAG GAACTCAAAG 101 CATTTTTCGA TGCGGGCTAC
AACCAGCAGC AGGCAGTCGA AGTCGTGATG 151 GGCGT.AsyC TgGCAACCCT
GTGCAACTAC GTCAACAACC TCGGACAAAC 201 CGAAATCAAC CCCGAATTGC
AGGCTTACGC CTGA
This corresponds to the amino acid sequence <SEQ ID 1056; ORF
263>:
TABLE-US-01327 m263.pep (partial) 1 ..GCAGCAGGCG AATTTGACGA
TGCCAAACTC GGCGCGCTCG CCGCCTTCAC 51 CCAAGCCGTA ATGGCGAAAA
AAGGCGCGGT ATCCGACGAG GAACTCAAAG 101 CATTTTTCGA TGCGGGCTAC
AACCAGCAGC AGGCAGTCGA AGTCGTGATG 151 GGCGT.AsyC TgGCAACCCT
GTGCAACTAC GTCAACAACC TCGGACAAAC 201 CGAAATCAAC CCCGAATTGC
AGGCTTACGC CTGA
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 263
shows 85.7% identity over a 77 aa overlap with a predicted ORF (ORF
263.ng) from N. gonorrhoeae:
TABLE-US-01328 m263/g263 10 20 30 m263.pep
AAGEFDDAKLGALAAFTQAVMAKKGAVSDE |||: ||||||||||||||||||||||||: g263
QCSFCVAGHTKLATLKKLLSEQSLNAARALAAGKSDDAKLGALAAFTQAVMAKKGAVSDD 80 90
100 110 120 130 40 50 60 70 m263.pep
ELKAFFDAGYNQQQAVEVVMGVXLATLCNYVNNLGQTEINPELQAYAX
||:||::||||:|||||||||| |||||||:|||:||||||:|||||| g263
ELNAFLEAGYNRQQAVEVVMGVALATLCNYANNLAQTEINPKLQAYAX 140 150 160 170
180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1057>:
TABLE-US-01329 a263.seq 1 ATGGCACGTT TAACCGTACA CACCCTCGAA
ACCGCCCCCG AAGCCGCCAA 51 AGCGCGCGTC GAGGCGGTAC TTCAAAACAA
CGGCTTTATC CCCAACCTTA 101 TCGGCGTATT ATCAAACGCC CCCGAAGCCT
TGGCGTTTTA CCAAGAAGTC 151 GGCAAGCTCA ACGCCGCCAA CAGCCTGACC
GCCGGCGAAG TCGAAGTAAT 201 CCAGATTATT GCCGCCCGCA CCAACCAATG
CGGCTTCTGC GTGGCAGGGC 251 ACACCAAACT CGCAACCCTG AAAAAACTCC
TTTCCGAACA ATCCGTCAAA 301 GCCGCGCGCG CTTTGGCGGC AGGCGAATTT
GACGATGCTA AACTCGGCGC 351 GCTCGCCGCC TTTACCCAAG CCGTAATGGC
AAAAAAAGGC GCGGTATCCG 401 ACGAGGAACT CAAAGCATTT TTTGATGCGG
GCTACAACCA GCAGCAGGCA 451 GTCGAAGTCG TGATGGGCGT AGCCTTGGCA
ACTTTGTGCA ACTACGTCAA 501 CAACCTCGGA CAAACCGAAA TCAACCCCGA
ATTGCAGGCT TACGCCTGA
This corresponds to the amino acid sequence <SEQ ID 1058; ORF
263.a>:
TABLE-US-01330 a263.pep 1 MARLTVHTLE TAPEAAKARV EAVLQNNGFI
PNLIGVLSNA PEALAFYQEV 51 GKLNAANSLT AGEVEVIQII AARTNQCGFC
VAGHTKLATL KKLLSEQSVK 101 AARALAAGEF DDAKLGALAA FTQAVMAKKG
AVSDEELKAF FDAGYNQQQA 151 VEVVMGVALA TLCNYVNNLG QTEINPELQA YA*
m263/a263 97.4% identity in 77 aa overlap 10 20 30 m263.pep
AAGEFDDAKLGALAAFTQAVMAKKGAVSDE |||||||||||||||||||||||||||||| a263
QCGFCVAGHTKLATLKKLLSEQSVKAARALAAGEFDDAKLGALAAFTQAVMAKKGAVSDE 80 90
100 110 120 130 40 50 60 70 m263.pep
ELKAFFDAGYNQQQAVEVVMGXXLATLCNYVNNLGQTEINPELQAYAX
||||||||||||||||||||| ||||||||||||||||||||||||| a263
ELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNLGQTEINPELQAYAX 140 150 160 170
180
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1059>:
TABLE-US-01331 g264.seq 1 ttgactttaa cccgaaaaac ccttttcctc
ctcaccgccg cgttcggcac 51 acactccctt cagacggcat ccgccgacgc
agtggtcaag ccggaaaaac 101 tgcacgcctc cgccaaccgc agctacaaag
tcgccgaatt cacgcaaacc 151 ggcaacgcct cgtggtacgg cggcaggttt
cacgggcgca aaacttccgg 201 cggagaccgc tacgatatga acgcctttac
cgccgcccac aaaaccctgc 251 ccatccccag ccatgtgcgc gtaaccaaca
ccaaaaacgg caaaagcgtc 301 atcgtccgcg tcaacgaccg cggccccttc
cacggcaacc gcatcatcga 351 cgtatccaaa gccgccgcgc aaaaattggg
ctttgtcagc caagggacgg 401 cacacgtcaa aatcgaacaa atcgtcccgg
gccaatccgc accggttgcc 451 gaaaacaaag acatctttat cgacttgaaa
tctttcggta cggaacacga 501 agcacaagcc tatctgaacc aagccgccca
aaatttcgcc gcttcgtcat 551 caagcccgaa cctctcggtt gaaaaacgcc
gttacgaata cgttgtcaaa 601 atgggcccgt ttgcctcgca ggaacgcgcc
gccgaagccg aagcgcaggc 651 acgcggtatg gttcgggcgg tactgacctc
cggttga
This corresponds to the amino acid sequence <SEQ ID 1060; ORF
264.ng>:
TABLE-US-01332 g264.pep 1 LTLTRKTLFL LTAAFGTHSL QTASADAVVK
PEKLHASANR SYKVAEFTQT 51 GNASWYGGRF HGRKTSGGDR YDMNAFTAAH
KTLPIPSHVR VTNTKNGKSV 101 IVRVNDRGPF HGNRIIDVSK AAAQKLGFVS
QGTAHVKIEQ IVPGQSAPVA 151 ENKDIFIDLK SFGTEHEAQA YLNQAAQNFA
ASSSSPNLSV EKRRYEYVVK 201 MGPFASQERA AEAEAQARGM VRAVLTSG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1061>:
TABLE-US-01333 m264.seq 1 TTGACTTTAA CCCGAAAAAC CCTTTTCCTT
CTCACCGCCG CATTCGGCAC 51 ACACTCCCTT CAGACGGCAT CCGCCGACGC
AGTGGTCAAG GCAGAAAAAC 101 TGCACGCCTC CGCCAACCGC AGCTACAAAG
TCGCCGGAAA ACGCTACACG 151 CCGAAAAACC AAGTCGCCGA ATTCACGCAA
ACCGGCAACG CCTCGTGGTA 201 CGGCGGCAGG TTTCACGGGC GCAAAACTTC
CGGCGGAGAA CGATACGATA 251 TGAACGCCTT TACCGCCGCC CACAAAACCC
TGCCCATCCC CAGCTATGTG 301 CGCGTAACCA ATACCAAAAA CGGCAAAAGC
GTCATCGTCC GCGTCAACGA 351 CCGCGGCCCC TTCCACGGCA ACCGCATCAT
CGACGTATCC AAAGCCGCCG 401 CGCAAAAATT GGGCTTTGTC AACCAAGGGA
CGGCACACGT CAAAATCGAA 451 CAAATCGTCC CGGGCCAATC CGCACCGGTT
GCCGAAAACA AAGACATCTT 501 TATCGACTTG AAATCTTTCG GTACGGAACA
CGAAGCACAA GCCTATCTGA 551 ACCAAGCCGC CCAAAACTTC GCCGTTTCGT
CATCGGGTAC GAACCTCTCG 601 GTTGAAAAAC GCCGTTACGA ATACGTCGTC
AAAATGGGAC CGTTTACCTC 651 GCAGGAACGC GCCGCCGAAG CCGAAGCTCA
GGCGCGCGGT ATGGTTCGGG 701 CGGTATTGAC CGCCGGCTGA
This corresponds to the amino acid sequence <SEQ ID 1062; ORF
264>:
TABLE-US-01334 m264.pep 1 LTLTRKTLFL LTAAFGTHSL QTASADAVVK
AEKLHASANR SYKVAGKRYT 51 PKNQVAEFTQ TGNASWYGGR FHGRKTSGGE
RYDMNAFTAA HKTLPIPSYV 101 RVTNTKNGKS VIVRVNDRGP FHGNRIIDVS
KAAAQKLGFV NQGTAHVKIE 151 QIVPGQSAPV AENKDIFIDL KSFGTEHEAQ
AYLNQAAQNF AVSSSGTNLS 201 VEKRRYEYVV KMGPFTSQER AAEAEAQARG
MVRAVLTAG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 264
shows 91.6% identity over a 239 aa overlap with a predicted ORF
(ORF 264.ng) from N. gonorrhoeae:
TABLE-US-01335 m264/g264 10 20 30 40 50 60 m264.pep
LTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKVAGKRYTPKNQVAEFTQ
|||||||||||||||||||||||||||||| |||||||||||||| |||| g264
LTLTRKTLFLLTAAFGTHSLQTASADAVVKPEKLHASANRSYKVA-----------EFTQ 10 20
30 40 70 80 90 100 110 120 m264.pep
TGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRVTNTKNGKSVIVRVNDRGP
|||||||||||||||||||:||||||||||||||||||:||||||||||||||||||||| g264
TGNASWYGGRFHGRKTSGGDRYDMNAFTAAHKTLPIPSHVRVTNTKNGKSVIVRVNDRGP 50 60
70 80 90 100 130 140 150 160 170 180 m264.pep
FHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPVAENKDIFIDLKSFGTEHEAQ
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| g264
FHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSAPVAENKDIFIDLKSFGTEHEAQ 110
120 130 140 150 160 190 200 210 220 230 240 m264.pep
AYLNQAAQNFAVSSSGTNLSVEKRRYEYVVKMGPFTSQERAAEAEAQARGMVRAVLTAGX
|||||||||||:|||: ||||||||||||||||||:|||||||||||||||||||||:|| g264
AYLNQAAQNFAASSSSPNLSVEKRRYEYVVKMGPFASQERAAEAEAQARGMVRAVLTSGX 170
180 190 200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1063>:
TABLE-US-01336 a264.seq 1 TTGACTTTAA CCCGAAAAAC CCTTTTCCTC
CTCACCGCCG CATTCGGCAT 51 ACATTCCTTT CAGACGGCAT CCGCCGACGC
AGTGGTCAGG GCAGAAAAAC 101 TGCACGCCTC CGCCAACCGC AGCTACAAAG
TCGCCGGAAA ACGCTACACG 151 CCGAAAAACC AAGTCGCCGA ATTCACGCAA
ACCGGCAACG CCTCGTGGTA 201 CGGCGGCAGG TTTCACGGGC GCAAAACTTC
CGGCGGAGAA CGATACGATA 251 TGAACGCCTT TACCGCCGCC CACAAAACCC
TGCCCATCCC CAGCTATGTG 301 CGCGTAACCA ATACCAAAAA CGGCAAAAGC
GTCATCGTCC GCGTCAACGA 351 CCGCGGCCCC TTCCACGGCA ACCGCATCAT
CGACGTATCC AAAGCCGCCG 401 CGCAAAAATT GGGCTTTGTC AACCAAGGGA
CGGCGCACGT CAAAATCGAA 451 CAAATCGTCC CGGGCCAATC CGCACCGGTT
GCCGAAAACA AAGACATCTT 501 CATCGACTTG AAATCTTTCG GTACGGAACA
CGAAGCACAA GCCTATCTGA 551 ACCAAGCCGC CCAAAACCTG GCTTCATCGG
CATCAAACCC GAACCTCTCG 601 GTTGAAAAAC GCCGTTACGA ATACGTCGTC
AAAATGGGAC CGTTTGCCTC 651 GCAGGAACGC GCCGCCGAGG CCGAAGCTCA
GGCGCGCGGT ATGGTTCGGG 701 CGGTATTAAC CGCCGGTTGA
This corresponds to the amino acid sequence <SEQ ID 1064; ORF
264.a>:
TABLE-US-01337 a264.pep 1 LTLTRKTLFL LTAAFGIHSF QTASADAVVR
AEKLHASANR SYKVAGKRYT 51 PKNQVAEFTQ TGNASWYGGR FHGRKTSGGE
RYDMNAFTAA HKTLPIPSYV 101 RVTNTKNGKS VIVRVNDRGP FHGNRIIDVS
KAAAQKLGFV NQGTAHVKIE 151 QIVPGQSAPV AENKDIFIDL KSFGTEHEAQ
AYLNQAAQNL ASSASNPNLS 201 VEKRRYEYVV KMGPFASQER AAEAEAQARG
MVRAVLTAG* m264/a264 96.2% identity in 239 aa overlap 10 20 30 40
50 60 m264.pep
LTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKVAGKRYTPKNQVAEFTQ
|||||||||||||||| ||:|||||||||:|||||||||||||||||||||||||||||| a264
LTLTRKTLFLLTAAFGIHSFQTASADAVVRAEKLHASANRSYKVAGKRYTPKNQVAEFTQ 10 20
30 40 50 60 70 80 90 100 110 120 m264.pep
TGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRVTNTKNGKSVIVRVNDRGP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a264
TGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRVTNTKNGKSVIVRVNDRGP 70 80
90 100 110 120 130 140 150 160 170 180 m264.pep
FHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPVAENKDIFIDLKSFGTEHEAQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a264
FHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPVAENKDIFIDLKSFGTEHEAQ 130
140 150 160 170 180 190 200 210 220 230 240 m264.pep
AYLNQAAQNFAVSSSGTNLSVEKRRYEYVVKMGPFTSQERAAEAEAQARGMVRAVLTAGX
|||||||||:| |:|: ||||||||||||||||||:|||||||||||||||||||||||| a264
AYLNQAAQNLASSASNPNLSVEKRRYEYVVKMGPFASQERAAEAEAQARGMVRAVLTAGX 190
200 210 220 230 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1065>:
TABLE-US-01338 m265.seq 1 ATGTCGGTGA TTTTGCCGCC GACACGCGCC
AACGCTGCTT TTTCGGCTTG 51 GGCGCGGCTG ATGATTTTGT CTTGTTTGTT
GTGTTGGTGT GCGGCGTGTC 101 CGTGGTCGTC ATCGCCGTGT CCGTCGTGGT
GGGCGAGCGC GGGGGCGGAA 151 ATGCTCAGCA GTGCGGTTGC GGCGGAGGTC
AAGAGAAGGT GTTTGATGTT 201 CATAT.TTTT GCCTTTGTAA ATCGTGGGTT
GGAAAATGTG GATATTAATA 251 AGGTATCAAA TAACCGTCAG CCGGCGGTCA
ATACCGCCCG AACCATACCG 301 CGCGCCTGAG CTTCGGCTTC GGCGGCGCGT
TCCTGCGAGG TAAACGGTCC 351 CATTTTGACG ACGTATTCGT AA
This corresponds to the amino acid sequence <SEQ ID 1066; ORF
265>:
TABLE-US-01339 m265.pep 1 MSVILPPTRA NAAFSAWARL MILSCLLCWC
AACPWSSSPC PSWWASAGAE 51 MLSSAVAAEV KRRCLMFIXF AFVNRGLENV
DINKVSNNRQ PAVNTARTIP 101 RAXASASAAR SCEVNGPILT TYS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 265
shows 88.6% identity over a 123 aa overlap with a predicted ORF
(ORF 265.ng) from N. gonorrhoeae:
TABLE-US-01340 m265/g265 10 20 30 40 50 60 m265.pep
MSVILPPTRANAAFSAWARLMILSCLLCWCAACPWSSSPCPSWWASAGAEMLSSAVAAEV
||||||||||:||||||||||||||| |||||||||||||||||||||||| :||||| | g265
MSVILPPTRAQAAFSAWARLMILSCLPCWCAACPWSSSPCPSWWASAGAEMPNSAVAAAV 10 20
30 40 50 60 70 80 90 100 110 120 m265.pep
KRRCLMFIXFAFVNRGLENVDINKVSNNRQPAVNTARTIPRAXASASAARSCEVNGPILT
|||||||| ||:||:||:| ||||||||||| |:|||||||| ||||||||||:|||||| g265
KRRCLMFI-FALVNQGLKNGDINKVSNNRQPEVSTARTIPRACASASAARSCEANGPILT 70 80
90 100 110 m265.pep TYSX |||| g265 TYSX 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1067>:
TABLE-US-01341 a265.seq 1 ATGTCGGTGA TTTTGCCGCC GACACGCGCC
AACGCTGCTT TTTCGGCTTG 51 GGCGCGGCTG ATGATTTTGT CTTGTTTGCT
GTGTTGGTGT GCGGCGTGTC 101 CGTGGTCGTC ATCGCCGTGT CCGTCGTGGT
GGGCGAGTGC GGGGGCGGAA 151 ATGCCCATCA GTGCGGTTGC GGCGGCGGTC
AAGAGAAGGC GTTTGAAGTT 201 CATTTTTGCT CCTGCGAAGT ATCTGGT...
.....GGTGT TTGAAGGACG 251 TAAAGGCGGG ACATCAACCG GCGGTTAATA
CCGCCCGAAC CATACCGCGC 301 GCCTGAGCTT CGGCCTCGGC GGCGCGTTCC
TGCGAGGCAA ACGGTCCCAT 351 TTTGACGACG TATTCGTAA
This corresponds to the amino acid sequence <SEQ ID 1068; ORF
265.a>:
TABLE-US-01342 a265.pep 1 MSVILPPTRA NAAFSAWARL MILSCLLCWC
AACPWSSSPC PSWWASAGAE 51 MPISAVAAAV KRRRLKFIFA PAKYLX..XC
LKDVKAGHQP AVNTARTIPR 101 A*ASASAARS CEANGPILTT YS* m265/a265 79.7%
identity in 123 aa overlap 10 20 30 40 50 60 m265.pep
MSVILPPTRANAAFSAWARLMILSCLLCWCAACPWSSSPCPSWWASAGAEMLSSAVAAEV
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | a265
MSVILPPTRANAAFSAWARLMILSCLLCWCAACPWSSSPCPSWWASAGAEMPISAVAAAV 10 20
30 40 50 60 70 80 90 100 110 120 m265.pep
KRRCLMFIXFAFVNRGLENVDINKVSNNRQPAVNTARTIPRAXASASAARSCEVNGPILT ||| |
|| |: :: |: ::||||||||||||||||||||||||:|||||| a265
KRRRLKFI---FAPAKYLXXCLKDVKAGHQPAVNTARTIPRAXASASAARSCEANGPILT 70 80
90 100 110 m265.pep TYSX |||| a265 TYSX 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1069>:
TABLE-US-01343 g266.seq 1 agttcagacg gcatcgccgc cgacaatgcc
caaacagaaa gcccatcatg 51 accgcatcca tgtacatcct tttggtcttg
gcactcatct ttgccaacgc 101 ccccttcctc acgaccagac tgttcggcgt
ggccgcgctc aagcgcaaac 151 atttcggaca ccacctgatc gagctggcgg
caggtttcgc gctgaccgcc 201 tctcttgcct acatcctcga atcccgtgcg
ggagcggtac acaatcaggg 251 ttgggagttt tacgccaccg tcgtctgcct
gtacctcatt ttcgccttcc 301 cgtgtttcgt gcggcggtat ttttggcaca
cgcgcaacag ggaataa
This corresponds to the amino acid sequence <SEQ ID 1070; ORF
266.ng>:
TABLE-US-01344 g266.pep 1 MQFRRHRRRQ CPNRKPIMTA SMYILLVLAL
IFANAPFLTT RLFGVAALKR 51 KHFGHHLIEL AAGFALTASL AYILESRAGA
VHNQGWEFYA TVVCLYLIFA 101 FPCFVRRYFW HTRNRE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1071>:
TABLE-US-01345 m266.seq 1 ATGCCGTTCC GCAACGCGtT cAGACGGCAT
CGCCGCCGAC AACGCCTAAA 51 CAGAAAGCCC ACCATGACCG CATCCATGTA
CATCCTTTTG GTCTTGGCAC 101 TCATCTTTGC CAACGCCCCC TTCCTCACGA
CCAGACTGTT CGGCGTGGCC 151 rCACTCAAGC GCAAACATTT CGGACACCAC
ATGATCGAGC TGGCGGCAGG 201 TTTCGCGCTG ACCGCCGTTC TTGCCTACAT
CCTsGAATCC CGTGCAGGAT 251 CGGTACACGA TCAGGGTTGG GAGTTTTATG
CCACAGTCGT CTGCCTGTAC 301 CTGATTTTTG CGTTTCCATG TTTTGTGTGG
CGGTATTTTT GGCACACGCG 351 CAACAGGGAA TAG
This corresponds to the amino acid sequence <SEQ ID 1072; ORF
266>:
TABLE-US-01346 m266.pep 1 MPFRNAFRRH RRRQRLNRKP TMTASMYILL
VLALIFANAP FLTTRLFGVA 51 XLKRKHFGHH MIELAAGFAL TAVLAYILES
RAGSVHDQGW EFYATVVCLY 101 LIFAFPCFVW RYFWHTRNRE *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 266
shows 92.1% identity over a 114 aa overlap with a predicted ORF
(ORF 266.ng) from N. gonorrhoeae:
TABLE-US-01347 m266/g266 10 20 30 40 50 60 m266.pep
MPFRNAFRRHRRRQRLNRKPTMTASMYILLVLALIFANAPFLTTRLFGVAXLKRKHFGHH
|||||||| |||| ||||||||||||||||||||||||||||| ||||||||| g266
MQFRRHRRRQCPNRKPIMTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHH 10 20 30
40 50 70 80 90 100 110 120 m266.pep
MIELAAGFALTAVLAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNREX
:||||||||||| ||||||||||:||:|||||||||||||||||||||| ||||||||||| g266
LIELAAGFALTASLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVRRYFWHTRNREX 60 70
80 90 100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1073>:
TABLE-US-01348 a266.seq 1 ATGCCGTTCC GCAATGCGTT CAGACGGCAT
CGCCGCCGAC AATGCCCAAA 51 CAGAAAGCCC GCCATGACCG CATCCATGTA
CATCCTTTTG CTGCTTGCCT 101 TGATTTTTGC CAACGCCCCC TTCCTCACGA
CCAAGCTGTT CGGCATCGTA 151 CCGCTCAAGC GCAAACATTT CGGACACCAC
CTGATCGAGC TGGCGGCAGG 201 TTTCGCGCTG ACCGCCGTTC TTGCCTACAT
CCTCGAATCC CGTGCGGGAG 251 CGGTACACGA TCAGGGTTGG GAGTTTTACG
CCACCGTCGT CTGCCTGTAC 301 CTGATTTTTG CGTTTCCCTG TTTCGTGTGG
CGGTATTTTT GGCACACGCG 351 CAACAGGGAA TAG
This corresponds to the amino acid sequence <SEQ ID 1074; ORF
266.a>:
TABLE-US-01349 a266.pep 1 MPFRNAFRRH RRRQCPNRKP AMTASMYILL
LLALIFANAP FLTTKLFGIV 51 PLKRKHFGHH LIELAAGFAL TAVLAYILES
RAGAVHDQGW EFYATVVCLY 101 LIFAFPCFVW RYFWHTRNRE * m266/a266 91.7%
identity in 120 aa overlap 10 20 30 40 50 60 m266.pep
MPFRNAFRRHRRRQRLNRKPTMTASMYILLVLALIFANAPFLTTRLFGVAXLKRKHFGHH
|||||||||||||| ||||:|||||||||:|||||||||||||:|||:: ||||||||| a266
MPFRNAFRRHRRRQCPNRKPAMTASMYILLLLALIFANAPFLTTKLFGIVPLKRKHFGHH 10 20
30 40 50 60 70 80 90 100 110 120 m266.pep
MIELAAGFALTAVLAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE
:||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| a266
LIELAAGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE 70 80
90 100 110 120 m266.pep X | a266 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1075>:
TABLE-US-01350 g267.seq 1 atgcaagtcg ccttttttct cgccgtggta
ttcaaaaata tgggtttcca 51 caatcgcatc ggtcgggcag gcctcttcgc
agaaaccgca gaagatgcac 101 ttggtcaggt cgatgtcgta acgcttggtg
cggcgggtgc cgtcttcgcg 151 ttcttccgat tcgatgttga tcgccattgc
cggacacacc gcctcgcaca 201 atttacacgc gatgcagcgt tcctctccgt
tcggaaaacg gcgttgcgcg 251 tgcagaccgc ggaaacgcac ggattgcggc
gttttctctt cgggaaaata 301 aattgtgtct ttgcgggcaa aaaagttttt
gagcgttacg cccatgcctt 351 tgaccagttc gccaagcaga aaggttttta ctaa
This corresponds to the amino acid sequence <SEQ ID 1076; ORF
267.ng>:
TABLE-US-01351 g267.pep 1 MQVAFFLAVV FKNMGFHNRI GRAGLFAETA
EDALGQVDVV TLGAAGAVFA 51 FFRFDVDRHC RTHRLAQFTR DAAFLSVRKT
ALRVQTAETH GLRRFLFGKI 101 NCVFAGKKVF ERYAHAFDQF AKQKGFY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1077>:
TABLE-US-01352 m267.seq 1 GTGCAAGTCG CCTTTTTTCT CGCCGTGGTA
TTCAAAAATA TGGGTTTCCA 51 CAATCGCATC AGTCGGGCAT GCCTCTTCGC
AGAAACCGCA GAAGATGCAC 101 TTGGTCAGGT CGATGTCGTA ACGCTTGGTG
CGGCGCGTAC CGTCTTCACG 151 TTCTTCCGAT TCGATGTTAA TCGCCATTGC
CGGACACACT GCCTCACACA 201 ACTTACACGC GATACACCGC TCTTCGCCGT
TCGGATACCG CcGCTGCGCG 251 TGCAGACCGC GGAAACGCAC GGATTGCGGC
GTTTTCTCTT CGGGGAAATA 301 AATTGTGTCT TTGCGGGCGA AAAAGTTTTT
GAGCGTTACG CCCATACCTT 351 TTACCAATTC GCCAAGCAGA AAGGTTTTTA CTAA
This corresponds to the amino acid sequence <SEQ ID 1078; ORF
267>:
TABLE-US-01353 m267.pep 1 VQVAFFLAVV FKNMGFHNRI SRACLFAETA
EDALGQVDVV TLGAARTVFT 51 FFRFDVNRHC RTHCLTQLTR DTPLFAVRIP
PLRVQTAETH GLRRFLFGEI 101 NCVFAGEKVF ERYAHTFYQF AKQKGFY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 267
shows 82.7% identity over a 127 aa overlap with a predicted ORF
(ORF 267.ng) from N. gonorrhoeae:
TABLE-US-01354 m267/g267 10 20 30 40 50 60 m267.pep
VQVAFFLAVVFKNMGFHNRISRACLFAETAEDALGQVDVVTLGAARTVFTFFRFDVNRHC
:|||||||||||||||||||:| ||||||||||||||||||||| :||:||||||:||| g267
MQVAFFLAVVFKNMGFHNRIGRAGLFAETAEDALGQVDVVTLGAAGAVFAFFRFDVDRHC 10 20
30 40 50 60 70 80 90 100 110 120 m267.pep
RTHCLTQLTRDTPLFAVRIPPLRVQTAETHGLRRFLFGEINCVFAGEKVFERYAHTFYQF |||
|:|:|||: :::|| |||||||||||||||||:|||||||:||||||||:| || g267
RTHRLAQFTRDAAFLSVRKTALRVQTAETHGLRRFLFGKINCVFAGKKVFERYAHAFDQF 70 80
90 100 110 120 m267.pep AKQKGFYX |||||||| g267 AKQKGFYX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1079>:
TABLE-US-01355 a267.seq 1 GTGCAAGTCG CCTTTTTTCT CGCCGTGGTA
TTCAAAAATA TGGGTTTCCA 51 CAATCGCATC GGTCGGGCAG GCTTCTTCGC
AGAAACCGCA GAAGATGCAC 101 TTGGTCAGGT CGATGTCGTA ACGCTTGGTG
CGGCGCGTGC CGTCTTCGCG 151 TTCTTCCGAT TCGATGTTGA TCGCCATTGC
GGGGCAAACG GCTTCACACA 201 ATTTACACGC GATGCAGCGT TCCTCGCCGT
TTGGATAACG GCGTTGCGCG 251 TGCAGACCGC GGAAACGCAC GGATTGCGGC
GTTTTCTCTT CGGGAAAATA 301 AATCGTGTCT TTGCGGGCAA AAAAGTTTTT
GAGCGTTACG CCCATACCTT 351 TTACCAATTC GCCAAGCAGA AAGGTTTTTA CTAA
This corresponds to the amino acid sequence <SEQ ID 1080; ORF
267.a>:
TABLE-US-01356 a267.pep 1 VQVAFFLAVV FKNMGFHNRI GRAGFFAETA
EDALGQVDVV TLGAARAVFA 51 FFRFDVDRHC GANGFTQFTR DAAFLAVWIT
ALRVQTAETH GLRRFLFGKI 101 NRVFAGKKVF ERYAHTFYQF AKQKGFY* m267/a267
82.7% identity in 127 aa overlap 10 20 30 40 50 60 m267.pep
VQVAFFLAVVFKNMGFHNRISRACLFAETAEDALGQVDVVTLGAARTVFTFFRFDVNRHC
||||||||||||||||||||:|| :|||||||||||||||||||||:||:||||||:||| a267
VQVAFFLAVVFKNMGFHNRIGRAGFFAETAEDALGQVDVVTLGAARAVFAFFRFDVDRHC 10 20
30 40 50 60 70 80 90 100 110 120 m267.pep
RTHCLTQLTRDTPLFAVRIPPLRVQTAETHGLRRFLFGEINCVFAGEKVFERYAHTFYQF ::
:||:|||: ::|| | |||||||||||||||||:|| ||||:||||||||||||| a267
GANGFTQFTRDAAFLAVWITALRVQTAETHGLRRFLFGKINRVFAGKKVFERYAHTFYQF 70 80
90 100 110 120 m267.pep AKQKGFYX |||||||| a267 AKQKGFYX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1081>:
TABLE-US-01357 G268.seq 1 atgaaaaaaa atttacccgc actggcattg
gcaagtatgc tgattttgtc 51 gggctgcgac cgtttgggaa taggcaaccc
gttttccgga aaggaaattt 101 cctgcggaag cgaagagact aaagagattt
tggtcaaact ggtccgcgac 151 aatgtcgaag gtgaaaccgt caaaactttt
gacgacgacg cattcaaaga 201 ccaagcattt gccgatatcg gcatatcgca
tatccgcaga atggtcgaac 251 gtttgggcat aaccgtcgat gaagtccgaa
ctaccgagaa aaccgacacg 301 tccagcaaac tcaaatgtga agccgcgtta
aaactggacg tgcccgacga 351 tgttgtcgat tatgccgtcg ccgccaacca
atctataggc aacagccata 401 agaaaacgcc cgactttttt gaaccctact
accgcaaaga aggcgcgtat 451 tatgtcaaaa ctatttctta cagcgtccag
ccgacagacg acaaaagcaa 501 aatctttgcc gaactcagtc aggcacacga
tatcatccat ccgctcagcg 551 agctggtgtc tatggcactg attaaagagc
cgttggacaa agcgaaacaa 601 aggaacgaaa aacttgaagc ggcagaagcc
accgcgcagg aagcgaggga 651 ggcagaagaa gcggcggcgc aggaggcatt
gggtcgggag caggaagccg 701 cccgcgtatc cgaatgggaa gaacgctaca
agctgtcgcg cagcgagttc 751 gagcagtttt ggaaaggatt gcctcaaact
gtacagaata agctgcaagc 801 ctcgcagaaa acatggaaaa gcggtatgga
caagatctgt gccaacaatg 851 cgaaagccga aggtgaaacg ccaaacggca
taaaagtcag tgagttggcg 901 tgtaaaacgg cagaaaccga agcacgcttg
gaagagctgc acaaccgtaa 951 aaaagccctt atcgacgaaa tggtcaggga
agaggacaag aaagaactgc 1001 caaagcggct ctga
This corresponds to the amino acid sequence <SEQ ID 1082; ORF
268.ng>:
TABLE-US-01358 m268.pep 1 MKKNLPALAL ASMLILSGCD RLGIGNPFSG
KEISCGSEET KEILVKLVRD 51 NVEGETVKTF DDDAFKDQAF ADIGISHIRR
MVERLGITVD EVRTTEKTDT 101 SSKLKCEAAL KLDVPDDVVD YAVAANQSIG
NSHKKTPDFF EPYYRKEGAY 151 YVKTISYSVQ PTDDKSKIFA ELSQAHDIIH
PLSELVSMAL IKEPLDKAKQ 201 RNEKLEAAEA TAQEAREAEE AAAQEALGRE
QEAARVSEWE ERYKLSRSEF 251 EQFWKGLPQT VQNKLQASQK TWKSGMDKIC
ANNAKAEGET PNGIKVSELA 301 CKTAETEARL EELHNRKKAL IDEMVREEDK
KELPKRL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1083>:
TABLE-US-01359 m268.seq (partial) 1 ..ATGGCACTGA TTAAAGAGCC
GTTGGACAAA GTGAAACAAA GGAACGAAGA 51 ACTTGAAGCG GCAGAAGAAG
CGGCGGCGCA GGAGGCATTG GGTCGGGAGC 101 AGGAAGCCGC CCGCGTATCC
GAATGGGAAG AACGCTACAA GCTGTCGCGC 151 AG.CAGTTCG AGCAGTTCTG
GAAAGGATTG CCTCAAACCG TACAGAATAA 201 GCTGCAACCn TCACAGAAAA
CATGGAAAAG CGGGATGGAT AAAATCTGTG 251 CCAACAATGC GAAAGCTGAA
GGTAAAACGC CAAACGGCAT AAAATTCAGC 301 GAACTGGCAT GCAAAACGGC
GAAAACCGAA GCACGCTTGG AAGAGCTGCA 351 CAACCGTAAA AAAGCCCTTA
TCGACGAAAT GGyCAGGGAA GCGGACAmGA 401 AAGAACTGTC AAAGCGGCTs TGA
This corresponds to the amino acid sequence <SEQ ID 1084; ORF
268>:
TABLE-US-01360 m268.pep (partial) 1 ..MALIKEPLDK VKQRNEELEA
AEEAAAQEAL GREQEAARVS EWEERYKLSR 51 XQFEQFWKGL PQTVQNKLQP
SQKTWKSGMD KICANNAKAE GKTPNGIKFS 101 ELACKTAKTE ARLEELHNRK
KALIDEMXRE ADXKELSKRL *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 268
shows 86.0% identity over a 150 aa overlap with a predicted ORF
(ORF 268.ng) from N. gonorrhoeae:
TABLE-US-01361 m268/g268 10 20 m268.pep
MALIKEPLDKVKQRNEELEAAE-------- ||||||||||:|||||:||||| g268
SVQPTDDKSKIFAELSQAHDIIHPLSELVSMALIKEPLDKAKQRNEKLEAAEATAQEARE 160
170 180 190 200 210 30 40 50 60 70 80 m268.pep
--EAAAQEALGREQEAARVSEWEERYKLSRSQFEQFWKGLPQTVQNKLQPSQKTWKSGMD
|||||||||||||||||||||||||||||:||||||||||||||||| |||||||||| g268
AEEAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMD 220
230 240 250 260 270 90 100 110 120 130 140 m268.pep
KICANNAKAEGKTPNGIKFSELACKTAKTEARLEELHNRKKALIDEMXREADXKELSKRLX
|||||||||||:|||||| ||||||||:||||||||||||||||||| || | ||| |||| g268
KICANNAKAEGETPNGIKVSELACKTAETEARLEELHNRKKALIDEMVREEDKKELPKRLX 280
290 300 310 320 330
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1085>:
TABLE-US-01362 a268.seq 1 ATGGCACTGA TTAAAGAGCC GTTGGACAAA
GCGAAACAAA GGAACGAAGA 51 ACTTGAAGCG GCAGAAGAAG CGGCGGCGCA
GGAGGCATTG GGTCGGGAGC 101 AGGAAGTCGA CCGCGTATCC GAATGGGAAG
AACGCTACAA GCTGTCGCGC 151 AGCGAGTTCG AGCAGTTCTG GAAAGGATTG
CCTCAAACCG TACAGAATAA 201 GCTGCAAGCC TCACAGAAAA CATGGAAAAG
CGGGATGGAT AAAATCTGTG 251 CCAACAATGC GAAAGCTGAA GGTGAAACGC
CAAACGGCAT AAAATTCAGC 301 GAACTGGCAT GCAAAACGGC GGAAACCGAA
GCACGCTTGG AAGAGCTGCA 351 CAACCGTAAA AAAGCCCTTC TCGACGAAAT
GGCCAGGGAA GCGGACAAGA 401 AAGAACTGCC AAAGCGGCTC TGA
This corresponds to the amino acid sequence <SEQ ID 1086; ORF
268.a>:
TABLE-US-01363 a268.pep 1 MALIKEPLDK AKQRNEELEA AEEAAAQEAL
GREQEVDRVS EWEERYKLSR 51 SEFEQFWKGL PQTVQNKLQA SQKTWKSGMD
KICANNAKAE GETPNGIKFS 101 ELACKTAETE ARLEELHNRK KALLDEMARE
ADKKELPKRL * m268/a268 91.4% identity in 140 aa overlap 10 20 30 40
50 60 m268.pep
MALIKEPLDKVKQRNEELEAAEEAAAQEALGREQEAARVSEWEERYKLSRXQFEQFWKGL
||||||||||:||||||||||||||||||||||||: ||||||||||||| :|||||||| a268
MALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKGL 10 20
30 40 50 60 70 80 90 100 110 120 m268.pep
PQTVQNKLQPSQKTWKSGMDKICANNAKAEGKTPNGIKFSELACKTAKTEARLEELHNRK
||||||||| |||||||||||||||||||||:|||||||||||||||:|||||||||||| a268
PQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELHNRK 70 80
90 100 110 120 130 140 m268.pep KALIDEMXREADXKELSKRLX |||:||| ||||
||| |||| a268 KALLDEMAREADKKELPKRLX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1087>:
TABLE-US-01364 m268-1.seq 1 GTGCAATCCC GATATGATGG TTTGCATAAA
TTTAAACATA TATGTTCCGC 51 AGCTATGGCA CTGATTAAAG AGCCGTTGGA
CAAAGTGAAA CAAAGGAACG 101 AAGAACTTGA AGCGGCAGAA GAAGCGGCGG
CGCAGGAGGC ATTGGGTCGG 151 GAGCAGGAAG CCGCCCGCGT ATCCGAATGG
GAAGAACGCT ACAAGCTGTC 201 GCGCAGCGAG TTCGAGCAGT TCTGGAAAGG
ATTGCCTCAA ACCGTACAGA 251 ATAAGCTGCA AGCCTCACAG AAAACATGGA
AAAGCGGGAT GGATAAAATC 301 TGTGCCAACA ATGCGAAAGC TGAAGGTAAA
ACGCCAAACG GCATAAAATT 351 CAGCGAACTG GCATGCAAAA CGGCGAAAAC
CGAAGCACGC TTGGAAGAGC 401 TGCACAACCG TAAAAAAGCC CTTATCGACG
AAATGGCCAG GGAAGCGGAC 451 AAGAAAGAAC TGTCAAAGCG GCTCTGA
This corresponds to the amino acid sequence <SEQ ID 1088; ORF
268-1>:
TABLE-US-01365 m268-1.pep 1 VQSRYDGLHK FKHICSAAMA LIKEPLDKVK
QRNEELEAAE EAAAQEALGR 51 EQEAARVSEW EERYKLSRSE FEQFWKGLPQ
TVQNKLQASQ KTWKSGMDKI 101 CANNAKAEGK TPNGIKFSEL ACKTAKTEAR
LEELHNRKKA LIDEMAREAD 151 KKELSKRL* m268-1/g268 82.3% identity in
164 aa overlap 10 20 30 m268-1.pep
VQSRYDGLHKFKHICSAAMALIKEPLDKVKQRNE :| :| :::: | ||||||||||:|||||
g268 KEGAYYVKTISYSVQPTDDKSKIFAELSQAHDIIHPLSELVS--MALIKEPLDKAKQRNE
150 160 170 180 190 200 40 50 60 70 80 m268-1.pep
ELEAAE----------EAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKGLPQTVQN :|||||
|||||||||||||||||||||||||||||||||||||||||||| g268
KLEAAEATAQEAREAEEAAAQEALGREQEAARVSEWEERYKLSRSEFEQFWKGLPQTVQN 210
220 230 240 250 260 90 100 110 120 130 140 m268-1.pep
KLQASQKTWKSGMDKICANNAKAEGKTPNGIKFSELACKTAKTEARLEELHNRKKALIDE
|||||||||||||||||||||||||:|||||| ||||||||:|||||||||||||||||| g268
KLQASQKTWKSGMDKICANNAKAEGETPNGIKVSELACKTAETEARLEELHNRKKALIDE 270
280 290 300 310 320 150 159 m268-1.pep MAREADKKELSKRLX |:|| |||||
|||| g268 MVREEDKKELPKRLX 330
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1089>:
TABLE-US-01366 a268-1.seq 1 GTGCAATCCC GATATGATGG TTTGCATAAA
TTTAAACATA TATGTTCCGC 51 AGCTATGGCA CTGATTAAAG AGCCGTTGGA
CAAAGCGAAA CAAAGGAACG 101 AAGAACTTGA AGCGGCAGAA GAAGCGGCGG
CGCAGGAGGC ATTGGGTCGG 151 GAGCAGGAAG TCGACCGCGT ATCCGAATGG
GAAGAACGCT ACAAGCTGTC 201 GCGCAGCGAG TTCGAGCAGT TCTGGAAAGG
ATTGCCTCAA ACCGTACAGA 251 ATAAGCTGCA AGCCTCACAG AAAACATGGA
AAAGCGGGAT GGATAAAATC 301 TGTGCCAACA ATGCGAAAGC TGAAGGTGAA
ACGCCAAACG GCATAAAATT 351 CAGCGAACTG GCATGCAAAA CGGCGGAAAC
CGAAGCACGC TTGGAAGAGC 401 TGCACAACCG TAAAAAAGCC CTTCTCGACG
AAATGGCCAG GGAAGCGGAC 451 AAGAAAGAAC TGCCAAAGCG GCTCTGA
This corresponds to the amino acid sequence <SEQ ID 1090; ORF
268-1.a>:
TABLE-US-01367 a268-1.pep 1 VQSRYDGLHK FKHICSAAMA LIKEPLDKAK
QRNEELEAAE EAAAQEALGR 51 EQEVDRVSEW EERYKLSRSE FEQFWKGLPQ
TVQNKLQASQ KTWKSGMDKI 101 CANNAKAEGE TPNGIKFSEL ACKTAETEAR
LEELHNRKKA LLDEMAREAD 151 KKELPKRL* a268-1/m268-1 95.6% identity in
158 aa overlap 10 20 30 40 50 60 a268-1.pep
VQSRYDGLHKFKHICSAAMALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEW
||||||||||||||||||||||||||||:||||||||||||||||||||||||: ||||| m268-1
VQSRYDGLHKFKHICSAAMALIKEPLDKVKQRNEELEAAEEAAAQEALGREQEAARVSEW 10 20
30 40 50 60 70 80 90 100 110 120 a268-1.pep
EERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSEL
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| m268-1
EERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGKTPNGIKFSEL 70 80
90 100 110 120 130 140 150 159 a268-1.pep
ACKTAETEARLEELHNRKKALLDEMAREADKKELPKRLX
|||||:|||||||||||||||:|||||||||||| |||| m268-1
ACKTAKTEARLEELHNRKKALIDEMAREADKKELSKRLX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1091>:
TABLE-US-01368 g269.seq 1 atggtttggc gtgtgaattg cgcggcaacg
gcggcgctga ttttttcgtc 51 cagcccttgg atttgggcgg tggtgtgggt
gtggtcgcgg tcggcttttt 101 cctgcaaacc ttgcgccagc cttgacgcgt
ccagtgcgcc ggcgttggcg 151 gtttcgccgt gggactttat ccggaacacg
gcttcgccca aggtgtcggc 201 ggctttgatg cacagtttta aaaccagggc
tttggggcgg ttttctgcgc 251 cgcccgttgc cattttgctg tccaatcgcg
gggttaaaaa accgttgtcg 301 tttaagtcgc cgtccgtcca agtcgatacg
agcgcgcttc tttgcctttc 351 attgcggtct tcgtaa
This corresponds to the amino acid sequence <SEQ ID 1092; ORF
269.ng>:
TABLE-US-01369 g269.pep 1 MVWRVNCAAT AALIFSSSPW IWAVVWVWSR
SAFSCKPCAS LDASSAPALA 51 VSPWDFIRNT ASPKVSAALM HSFKTRALGR
FSAPPVAILL SNRGVKKPLS 101 FKSPSVQVDT SALLCLSLRS S*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1093>:
TABLE-US-01370 m269.seq 1 ATGGTTTGGC GTGTGAATTG CGCGGCAACG
GCGGTGCTGA TTTTTTCGTC 51 CAGCCCTTGG ATTTGGGCGG CGGTGTGGGT
GTGGTCTCGG TCGGCTTTGT 101 CTTGCAAACC TTGCGCCaCG TGCCCGCGTC
CAGCGCCTGC GTTGATGGTT 151 TCGCCGTGGG ACTTTATCCA AAACACGGCT
TCGCCCAAGG TGTCGGCGGC 201 TTTGATGCAC AGTTTTAAAA CCAGGGCTTT
GGGGCGGTTT TCGTCGCCGC 251 CTGTCGCCAT TTTGCTGTCC GAGCGCGGGG
TTAAAAAGCC GTTGTCGTTT 301 AAATTTTCGT CCGTCCAAGT CGATACGAGC
GCGCTTCTCT GCCTTTCGTT 351 GCGGTCTTCG TAA
This corresponds to the amino acid sequence <SEQ ID 1094; ORF
269>:
TABLE-US-01371 m269.pep 1 MVWRVNCAAT AVLIFSSSPW IWAAVWVWSR
SALSCKPCAT CPRPAPALMV 51 SPWDFIQNTA SPKVSAALMH SFKTRALGRF
SSPPVAILLS ERGVKKPLSF 101 KFSSVQVDTS ALLCLSLRSS *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 269
shows 87.6% identity over a 121 aa overlap with a predicted ORF
(ORF 269.ng) from N. gonorrhoeae:
TABLE-US-01372 m269.pep
MVWRVNCAATAVLIFSSSPWIWAAVWVWSRSALSCKPCATCP-RPAPALMVSPWDFIQNT 59
|||||||||||:|||||||||||:||||||||:||||||: |||| |||||||:|| g269
MVWRVNCAATAALIFSSSPWIWAVVWVWSRSAFSCKPCASLDASSAPALAVSPWDFIRNT 60
m269.pep
ASPKVSAALMHSFKTRALGRFSSPPVAILLSERGVKKPLSFKFSSVQVDTSALLCLSLRS 119
||||||||||||||||||||||:||||||||:|||||||||| |||||||||||||||| g269
ASPKVSAALMHSFKTRALGRFSAPPVAILLSNRGVKKPLSFKSPSVQVDTSALLCLSLRS 120
m269.pep SX 121 || g269 SX 122
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1095>:
TABLE-US-01373 a269.seq 1 ATGGTTTGGC GTGTGAATTG CGCGGCAACG
GCGGTGCTGA TTTTTTCGTC 51 CAGCCCTTGG ATTTGGGCGG CGGTGTGGGT
GTGGGCGCGG TCTGCTTTGT 101 CTTGGAGGTT TTGCGCCAGC GTGCCCGCGT
CCAGCGCGCC GGCGTTGACG 151 GTTTCGCCGT GGGACTTTAT CCAGAACACG
GCTTCGCCCA AGGTGTCGGC 201 GGCTTTGATG CACAGTTTTA AAACCAGGGC
TTTGGGGCGG TTTTCGTCGC 251 CGCCTGTCGC CATTTTGCTG TCCGGGCGCG
GGGTTAAAAA GCCGTTGTCG 301 TTTAAATTTT CGTCCGTCCA AGTCGATACG
AGCGCGCTTC TCTGCCTTTC 351 GTTGTGGTCT TCGTAA
This corresponds to the amino acid sequence <SEQ ID 1096; ORF
269.a>:
TABLE-US-01374 a269.pep 1 MVWRVNCAAT AVLIFSSSPW IWAAVWVWAR
SALSWRFCAS VPASSAPALT 51 VSPWDFIQNT ASPKVSAALM HSFKTRALGR
FSSPPVAILL SGRGVKKPLS 101 FKFSSVQVDT SALLCLSLWS S* m269/a269 90.1%
identity in 121 aa overlap 10 20 30 40 50 60 m269.pep
MVWRVNCAATAVLIFSSSPWIWAAVWVWSRSALSCKPCATCP-RPAPALMVSPWDFIQNT
||||||||||||||||||||||||||||:||||| : ||: | |||| |||||||||| a269
MVWRVNCAATAVLIFSSSPWIWAAVWVWARSALSWRFCASVPASSAPALTVSPWDFIQNT 10 20
30 40 50 60 60 70 80 90 100 110 119 m269.pep
ASPKVSAALMHSFKTRALGRFSSPPVAILLSERGVKKPLSFKFSSVQVDTSALLCLSLRS
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | a269
ASPKVSAALMHSFKTRALGRFSSPPVAILLSGRGVKKPLSFKFSSVQVDTSALLCLSLWS 70 80
90 100 110 120 120 m269.pep SX || a269 SX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1097>:
TABLE-US-01375 g270.seq 1 atgaataaaa accgcaaatt actgcttgcc
gcactgctgc tgactgcctt 51 tgccgccttc aagctcgttt tgttgcaatg
gtggcaggcg cagcagccgc 101 aagccgtggc ggcgcaatgc gatttgaccg
agggttgcac gctgccggac 151 ggaagccgtg tccgcgccgc cgccgtttca
accaaaaaac cgtttgatat 201 ttatatcgaa cacgcgcccg ccggcacgga
acaggtcagc atcagcttca 251 gtatgaaaaa tatggatatg ggtttcaacc
gctatatgtt cgagcggcaa 301 ccgtcgggga cttggcaggc agcacgcatc
cgcctgcccg tctgtgtcga 351 aggcaggcgc gattttacgg cggacattac
aatcggcagc cggacatttc 401 agacggcatt taccgccgaa taa
This corresponds to the amino acid sequence <SEQ ID 1098; ORF
270.ng>:
TABLE-US-01376 g270.pep 1 MNKNRKLLLA ALLLTAFAAF KLVLLQWWQA
QQPQAVAAQC DLTEGCTLPD 51 GSRVRAAAVS TKKPFDIYIE HAPAGTEQVS
ISFSMKNMDM GFNRYMFERQ 101 PSGTWQAARI RLPVCVEGRR DFTADITIGS
RTFQTAFTAE *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1099>:
TABLE-US-01377 m270.seq 1 ATGAATAAAA ACCGTAAATT ACTGCTTGCC
GCACTGCTGC TGATTGCCTT 51 TGCCGCCGTC AAGCTCGTTT TGTTGCAATG
GTGGCAGGCG Ca.CAGCCGC 101 AAGCTGTGGC GGCGCAATGC GATTTGACCG
AGGGTTGCAC GCTGCCGGAC 151 GGAAGCCGCG TCCGCGCCGC CGCcGTTTCA
ACCAAAAAAC CGTTTGATAT 201 TTATATCGAA CACGCGCCCG CCGGCACGGA
ACAGGTCAGC ATCAGCTTCA 251 GTATGAAAAA TATGGATATG GGTTTCaACC
GCTATATGTT CGAGCGGCAA 301 cCGTCGGGGA CTTGGCAGGC AGTACGCATC
CGCCTGCCCA TCTGTGTCGA 351 AGGCAGGCGC GATTTTACGG CGGACATTAC
AATCGGCAGT CGGACATTTC 401 AGACGGCATT TACCGCCGAA TAA
This corresponds to the amino acid sequence <SEQ ID 1100; ORF
270>:
TABLE-US-01378 m270.pep 1 MNKNRKLLLA ALLLIAFAAV KLVLLQWWQA
XQPQAVAAQC DLTEGCTLPD 51 GSRVRAAAVS TKKPFDIYIE HAPAGTEQVS
ISFSMKNMDM GFNRYMFERQ 101 PSGTWQAVRI RLPICVEGRR DFTADITIGS
RTFQTAFTAE *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 270
shows 96.4% identity over a 140 aa overlap with a predicted ORF
(ORF 270.ng) from N. gonorrhoeae:
TABLE-US-01379 m270/g270 10 20 30 40 50 60 m270.pep
MNKNRKLLLAALLLIAFAAVKLVLLQWWQAXQPQAVAAQCDLTEGCTLPDGSRVRAAAVS
|||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| g270
MNKNRKLLLAALLLTAFAAFKLVLLQWWQAQQPQAVAAQCDLTEGCTLPDGSRVRAAAVS 10 20
30 40 50 60 70 80 90 100 110 120 m270.pep
TKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPSGTWQAVRIRLPICVEGRR
|||||||||||||||||||||||||||||||||||||||||||||||:|||||:|||||| g270
TKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPSGTWQAARIRLPVCVEGRR 70 80
90 100 110 120 130 140 m270.pep DFTADITIGSRTFQTAFTAEX
||||||||||||||||||||| g270 DFTADITIGSRTFQTAFTAEX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1101>:
TABLE-US-01380 a270.seq 1 ATGAATAAAA ACCGTAAATT ACTGCTTGCC
GCACTGCTGC TGATTGCCTT 51 TGCCGCCGTC AAGCTCGTTT TGTTGCAATG
GTGGCAGGCG CAGCAGCCGC 101 AAGCTGTGGC GGCGCAATGC GATTTGACCG
AGGGTTGCAC GCTGCCGGAC 151 GGAAGCCGCG TCCGCGCCGC CGCCGTTTCA
ACCAAAAAAC CGTTTGATAT 201 TTATATCGAA CACGCGCCCG CCGGCACGGA
ACAGGTCAGC ATCAGCTTCA 251 GTATGAAAAA TATGGATATG GGTTTCAACC
GCTATATGTT CGAGCGGCAA 301 CCGTCGGGGA CTTGGCAGGC AGTACGCATC
CGCCTGCCCA TCTGTGTCGA 351 AGGCAGGCGC GATTTTACGG CGGACATTAC
AATCGGCAGC CGGACATTTC 401 AGACGGCATT TACCGCCGAA TAA
This corresponds to the amino acid sequence <SEQ ID 1102; ORF
270.a>:
TABLE-US-01381 a270.pep 1 MNKNRKLLLA ALLLIAFAAV KLVLLQWWQA
QQPQAVAAQC DLTEGCTLPD 51 GSRVRAAAVS TKKPFDIYIE HAPAGTEQVS
ISFSMKNMDM GFNRYMFERQ 101 PSGTWQAVRI RLPICVEGRR DFTADITIGS
RTFQTAFTAE * m270/a270 99.3% identity in 140 aa overlap 10 20 30 40
50 60 m270.pep
MNKNRKLLLAALLLIAFAAVKLVLLQWWQAXQPQAVAAQCDLTEGCTLPDGSRVRAAAVS
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| a270
MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTEGCTLPDGSRVRAAAVS 10 20
30 40 50 60 70 80 90 100 110 120 m270.pep
TKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPSGTWQAVRIRLPICVEGRR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a270
TKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPSGTWQAVRIRLPICVEGRR 70 80
90 100 110 120 130 140 m270.pep DFTADITIGSRTFQTAFTAEX
||||||||||||||||||||| a270 DFTADITIGSRTFQTAFTAEX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1103>:
TABLE-US-01382 g271.seq 1 atgttcagtt cgcggatggc gaggatttgg
gcgacggggg taacgttgtg 51 tatggtcagt ccgtgtccgg cgttgacgac
caagcccaaa tcgccggcga 101 aatgcgcgcc gttttggatg cgctcgaact
gcctgatttg ttcggcgtgg 151 ctttgtgcgt cggcatatgc gccggtgtgc
agctcgacaa cgggcgcgcc 201 gacatcacgg gcggcttgga tttgcctgtc
gtcggcatcg ataaacaagg 251 acacgcgtat gcccgcgtcg gtcaggattt
tggcgaattc ggcgattttt 301 tcctgttgcg ccaatacgtc caaaccgcct
tcggtcgtga tttcctgccg 351 tttttcaggc acgatgcaca cgtcttccgg
catcacttta agcgcgtttt 401 cgagcatttc ttccgtcaac gccatttcaa
ggttcaggcg cgtgcggatg 451 gcgtttttga cggcaaatac atccgcgtct
ttgatgtggc ggcggtcttc 501 gcgcaggtgc atggtaatca ggtctgcacc
gtgcgtttcg gcaaccagtg 551 ccgcctccac ggggctggga taa
This corresponds to the amino acid sequence <SEQ ID 1104; ORF
271.ng>:
TABLE-US-01383 g271.pep 1 MFSSRMARIW ATGVTLCMVS PCPALTTKPK
SPAKCAPFWM RSNCLICSAW 51 LCASAYAPVC SSTTGAPTSR AAWICLSSAS
INKDTRMPAS VRILANSAIF 101 SCCANTSKPP SVVISCRFSG TMHTSSGITL
SAFSSISSVN AISRFRRVRM 151 AFLTANTSAS LMWRRSSRRC MVIRSAPCVS
ATSAASTGLG *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1105>:
TABLE-US-01384 m271.seq 1 AwGTTCAGTT CGCGGATGGC GAGGATTTGG
GCGATGGGGG TAACGTTGTG 51 TATGGTCAGT CCGTGTCCGG CGTTGACGAC
CAAGCCCAAA TCGCCGGCGA 101 AATGCGCGCC GTTTTGGATG CGCTCGAACT
GCCTGATTTG TTCGGCGTGG 151 CTGCGCGCGT CGGCATACGC GCCTGTGTGC
AGCTCGACAA CGGGCGCGCC 201 GACATCACGG GCGGCTTGGA TTTGCCTGTC
GTCGGCATCG ATAAACAAAG 251 ACACGCGTAT GCCTGCGTCG GTCAGGATTT
TGGTGAACCC GGCGATTTTT 301 TCCTGTTGCG CCAATACGTC CAAACCGCCT
TCGGTCGTGA TTTCCTGACG 351 TTTTTCAGGC ACGATGCACA CGTCTTCCGG
CATCACTTTC AAAGCGTTTT 401 CCAACATTTC TTCCGTCAAC GCCATTTCAA
GGTTCAGGCG CGTGCGGATG 451 GCGTTTTTGA CGGCAAACAC GTCCGCGTCT
TTGATGTGGC GGCGGTCTTC 501 GCGCAGGTGC ATGGTAATCA AATCCGCACC
GTGCGTTTCG GCAACCAGTG 551 CCGCCTCCAC GGGGCTGGGA TAA
This corresponds to the amino acid sequence <SEQ ID 1106; ORF
271>:
TABLE-US-01385 m271.pep 1 XFSSRMARIW AMGVTLCMVS PCPALTTKPK
SPAKCAPFWM RSNCLICSAW 51 LRASAYAPVC SSTTGAPTSR AAWICLSSAS
INKDTRMPAS VRILVNPAIF 101 SCCANTSKPP SVVISXRFSG TMHTSSGITF
KAFSNISSVN AISRFRRVRM 151 AFLTANTSAS LMWRRSSRRC MVIKSAPCVS
ATSAASTGLG *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 271
shows 95.2% identity over a 189 aa overlap with a predicted ORF
(ORF 271.ng) from N. gonorrhoeae:
TABLE-US-01386 m271/g271 10 20 30 40 50 60 m271.pep
XFSSRMARIWAMGVTLCMVSPCPALTTKPKSPAKCAPFWMRSNCLICSAWLRASAYAPVC
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| g271
MFSSRMARIWATGVTLCMVSPCPALTTKPKSPAKCAPFWMRSNCLICSAWLCASAYAPVC 10 20
30 40 50 60 70 80 90 100 110 120 m271.pep
SSTTGAPTSRAAWICLSSASINKDTRMPASVRILVNPAIFSCCANTSKPPSVVISXRFSG
||||||||||||||||||||||||||||||||||:| |||||||||||||||||| |||| g271
SSTTGAPTSRAAWICLSSASINKDTRMPASVRILANSAIFSCCANTSKPPSVVISCRFSG 70 80
90 100 110 120 130 140 150 160 170 180 m271.pep
TMHTSSGITFKAFSNISSVNAISRFRRVRMAFLTANTSASLMWRRSSRRCMVIKSAPCVS
|||||||||::|||:||||||||||||||||||||||||||||||||||||||:|||||| g271
TMHTSSGITLSAFSSISSVNAISRFRRVRMAFLTANTSASLMWRRSSRRCMVIRSAPCVS 130
140 150 160 170 180 190 m271.pep ATSAASTGLGX ||||||||||| g271
ATSAASTGLGX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1107>:
TABLE-US-01387 a271.seq 1 ATGTTCAGTT CGCGGATGGC GAGGATTTGG
GCGATGGGGG TAACGTTGTG 51 TATGGTCAGT CCGTGTCCGG CGTTGACGAC
CAAGCCCAAA TCGCTGGCAA 101 AATGCGCGCC GTTTTGGATG CGCTCGAACT
GCCTGATTTG TTCGGCGTGG 151 CTGCGCGCGT CGGCATACGC GCCTGTGTGC
AGCTCGACAA CGGGCGCGCC 201 GACATCACGG GCGGCTTGGA TTTGCCTGTC
GTCGGCATCG ATAAACAAGG 251 ACACGCGTAT GCCCGCGTCG GTCAGGATTT
TGGTGAATTC GGCAATTTTG 301 TCTTGTTGCG CCAATACGTC CAAGCCGCCT
TCGGTCGTGA TTTCCTGACG 351 TTTTTCCGGC ACGATGCACA CGTCTTCCGG
CATCACTTTA AGCGCGTTTT 401 CGAGCATTTC TTCCGTCAAC GCCATTTCAA
GGTTCAGGCG CGTGCGGATG 451 GCGTTTTTGA CAGCAAACAC GTCCGCGTCT
TTGATGTGGC GGCGGTCTTC 501 GCGCAGGTGC ATGGTAATCA GGTCGGCACC
GTGCGTTTCG GCAACCAGTG 551 CCGCCTCCAC GGGGCTGGGA TAA
This corresponds to the amino acid sequence <SEQ ID 1108; ORF
271.a>:
TABLE-US-01388 a271.pep 1 MFSSRMARIW AMGVTLCMVS PCPALTTKPK
SLAKCAPFWM RSNCLICSAW 51 LRASAYAPVC SSTTGAPTSR AAWICLSSAS
INKDTRMPAS VRILVNSAIL 101 SCCANTSKPP SVVIS*RFSG TMHTSSGITL
SAFSSISSVN AISRFRRVRM 151 AFLTANTSAS LMWRRSSRRC MVIRSAPCVS
ATSAASTGLG * m271/a271 96.3% identity in 189 aa overlap 10 20 30 40
50 60 m271.pep
XFSSRMARIWAMGVTLCMVSPCPALTTKPKSPAKCAPFWMRSNCLICSAWLRASAYAPVC
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| a271
MFSSRMARIWAMGVTLCMVSPCPALTTKPKSLAKCAPFWMRSNCLICSAWLRASAYAPVC 10 20
30 40 50 60 70 80 90 100 110 120 m271.pep
SSTTGAPTSRAAWICLSSASINKDTRMPASVRILVNPAIFSCCANTSKPPSVVISXRFSG
|||||||||||||||||||||||||||||||||||| ||:|||||||||||||||||||| a271
SSTTGAPTSRAAWICLSSASINKDTRMPASVRILVNSAILSCCANTSKPPSVVISXRFSG 70 80
90 100 110 120 130 140 150 160 170 180 m271.pep
TMHTSSGITFKAFSNISSVNAISRFRRVRMAFLTANTSASLMWRRSSRRCMVIKSAPCVS
|||||||||::|||:||||||||||||||||||||||||||||||||||||||:|||||| a271
TMHTSSGITLSAFSSISSVNAISRFRRVRMAFLTANTSASLMWRRSSRRCMVIRSAPCVS 130
140 150 160 170 180 190 m271.pep ATSAASTGLGX ||||||||||| a271
ATSAASTGLGX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1109>:
TABLE-US-01389 g272.seq 1 atgactgcaa aggaagaact gttcgcatgg
ctgcgccata tgaacaaaaa 51 caaaggttcc gacctgtttg tgacgaccca
tttcccgccc gctatgaagc 101 tggacggcaa aatcacccgc atcacggacg
aaccgctgac ggcggaaaaa 151 tgtatggaaa tcgccttttc gattatgagt
gcgaagcagg cggaagaatt 201 ttcatcgacc aacgagtgca atttcgccat
cagcctgccg gacaccagcc 251 gcttccgcgt caatgcgatg atacagcgcg
gtgcgacggc gttggtattc 301 cgcgcgatta ccagcaagat tcccaagttt
gaaagcctga acctgccgcc 351 ggccttgaag gatgttgcgc tgaaaaaacg
cgggctggtt atttttgtcg 401 gcggcaccgg ctcgggcaaa tcgacttcgc
tcgcctcgct tatcgactac 451 cgcaatgaaa attcgttcgg acacatcatc
accatcgaag atccgatcga 501 gtttgtccac gaacacaaaa actgcatcat
tacccagcgc gaggtcggcg 551 tggacacgga aaactggatg gcggcgttga
aaaatacgct gcgtcaggcg 601 ccggatgtga tccttatcgg cgaaatccgc
gaccgtgaaa caatggacta 651 cgccatcgcc tttgccgaaa cggggcattt
gtgtatggcg acgctgcacg 701 ccaacagcac caatcaggcg ctcgaccgca
tcatcaactt cttccccgag 751 gagcggcgcg aacaattgct gacggatttg
tcgctcaacc ttcaggcgtt 801 tatttcgcaa cgcctcgttc cgcgagacgg
cggcaagggc agggtggcgg 851 cagtcgaggt gctgctcaat tcgcccctga
tttcggagtt gattcacaac 901 ggcaacatcc atgaaatcaa agaagtgatg
aaaaaatcca ctaccctggg 951 tatgcagacc ttcgaccaac acctttacca
attgtatgaa aaaggcgaga 1001 tttccttgca ggatgccttg aaaaatgccg
attccgcaca tgatttgcgt 1051 ttggcggtac agttgcgcag ccgcagggca
caaagttccg accccgattt 1101 ggaactgctc tga
This corresponds to the amino acid sequence <SEQ ID 1110; ORF
272.ng>:
TABLE-US-01390 g272.pep 1 MTAKEELFAW LRHMNKNKGS DLFVTTHFPP
AMKLDGKITR ITDEPLTAEK 51 CMEIAFSIMS AKQAEEFSST NECNFAISLP
DTSRFRVNAM IQRGATALVF 101 RAITSKIPKF ESLNLPPALK DVALKKRGLV
IFVGGTGSGK STSLASLIDY 151 RNENSFGHII TIEDPIEFVH EHKNCIITQR
EVGVDTENWM AALKNTLRQA 201 PDVILIGEIR DRETMDYAIA FAETGHLCMA
TLHANSTNQA LDRIINFFPE 251 ERREQLLTDL SLNLQAFISQ RLVPRDGGKG
RVAAVEVLLN SPLISELIHN 301 GNIHEIKEVM KKSTTLGMQT FDQHLYQLYE
KGEISLQDAL KNADSAHDLR 351 LAVQLRSRRA QSSDPDLELL *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1111>:
TABLE-US-01391 m272.seq 1 ATGACCGCAA AGGAAGAACT GTTCGCATGG
CTGCGCCATA TGAwCCAAAA 51 CAAAGGTTCC GACCTGTTCG TGACAACCCA
TTTCCCGCCC GCAATGAAGC 101 TGGACGGCAA AATCACCCGC ATCACGGACG
AACCGCTGAC GGCGGAAAAA 151 TGTATGGAAA TCGCCTTTTC GATTATGAGT
GCGAAGCAGG CGGAAGAATT 201 TTCATCGACC AACGAGTGCA ACTTCGCCAT
CAGCCTGCCG GACACCAGCC 251 GCTTCCGCGT CAATGCGATG ATACAGCgCG
GCGCGACGGC GTTGGTATTC 301 CGTACGATTA CCAGCAAGAT TCCCAAGTTT
GAAAGCCTGA ACCTGCCGCC 351 AGTCTTGAAG GATGTCGCGC TGAAAAAACG
CGGGCTGGTT ATTTTTGTCG 401 GCGGCACCGG CTCGGGTAAA TCGACTTCGC
TTGCCTCGCT TATCGACTAC 451 CGCAATGAAA ATTCGTTCGG ACACATCATC
ACCATCGAAG ACCCGATCGA 501 GTTTGTCCAC GAACACAAAA ACTGCATCAT
CACCCAGCGC GAGGTCGGCG 551 TGGATACGGA AAACTGGATG GcGGCGTTGA
AAAACACGCT GCGTCAGGCG 601 CCTGATGTCA TCCTTATCGG CGAAATCCGT
GACCGCGAAA CAATGGACTA 651 CGCCATTGCC TTTGCCGAAA CGGGGCATTT
GTGTATGGCG ACGCTGCACG 701 CCAACAGCAC CAATCAGGCA CTCGACCGCA
TCATCAACTT TTTCCCCGAG 751 GAGCGGCGCG AACAATTGCT GACGGATTTG
TCGCTCAACC TTCAGGCGTT 801 TATTTCGCAA CGCCTCGTTC CGCGAGACGG
CGGCAAGGGC AGGGTGGCGG 851 CAGTCGAGGT GCTGCTCAAT TCGCCCCtGA
TTTCGGAGTT GATTCACAAC 901 GGCAACATCC ATGAAATCAA AGAAGTGATG
AAAAAATCCA CTACCCTGGG 951 TATGCAGACC TTCGATCAAC ACCTTTACCA
ATTGTATGAA AAAGGCGATA 1001 TTTCCCTGCA AGAAGCATTG AAAAATGCCG
ATTCCGCACA CGATTTGCGT 1051 TTGGCGGTAC AGTTGCGCAG CCGCCGCGCG
CAaAGTTyCA GCCCCGATTT 1101 GGnACTGCTC TGA
This corresponds to the amino acid sequence <SEQ ID 1112; ORF
272>:
TABLE-US-01392 m272.pep 1 MTAKEELFAW LRHMXQNKGS DLFVTTHFPP
AMKLDGKITR ITDEPLTAEK 51 CMEIAFSIMS AKQAEEFSST NECNFAISLP
DTSRFRVNAM IQRGATALVF 101 RTITSKIPKF ESLNLPPVLK DVALKKRGLV
IFVGGTGSGK STSLASLIDY 151 RNENSFGHII TIEDPIEFVH EHKNCIITQR
EVGVDTENWM AALKNTLRQA 201 PDVILIGEIR DRETMDYAIA FAETGHLCMA
TLHANSTNQA LDRIINFFPE 251 ERREQLLTDL SLNLQAFISQ RLVPRDGGKG
RVAAVEVLLN SPLISELIHN 301 GNIHEIKEVM KKSTTLGMQT FDQHLYQLYE
KGDISLQEAL KNADSAHDLR 351 LAVQLRSRRA QSXSPDLXLL *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 272
shows 97.6% identity over a 370 aa overlap with a predicted ORF
(ORF 272.ng) from N. gonorrhoeae:
TABLE-US-01393 m272/g272 10 20 30 40 50 60 m272.pep
MTAKEELFAWLRHMXQNKGSDLFVTTHFPPAMKLDGKITRITDEPLTAEKCMEIAFSIMS
|||||||||||||| :|||||||||||||||||||||||||||||||||||||||||||| g272
MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDEPLTAEKCMEIAFSIMS 10 20
30 40 50 60 70 80 90 100 110 120 m272.pep
AKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRTITSKIPKFESLNLPPVLK
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||:|| g272
AKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRAITSKIPKFESLNLPPALK 70 80
90 100 110 120 130 140 150 160 170 180 m272.pep
DVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHIITIEDPIEFVHEHKNCIITQR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g272
DVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHIITIEDPIEFVHEHKNCIITQR 130
140 150 160 170 180 190 200 210 220 230 240 m272.pep
EVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYAIAFAETGHLCMATLHANSTNQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g272
EVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYAIAFAETGHLCMATLHANSTNQA 190
200 210 220 230 240 250 260 270 280 290 300 m272.pep
LDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRDGGKGRVAAVEVLLNSPLISELIHN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g272
LDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRDGGKGRVAAVEVLLNSPLISELIHN 250
260 270 280 290 300 310 320 330 340 350 360 m272.pep
GNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDISLQEALKNADSAHDLRLAVQLRSRRA
||||||||||||||||||||||||||||||||:||||:|||||||||||||||||||||| g272
GNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGEISLQDALKNADSAHDLRLAVQLRSRRA 310
320 330 340 350 360 370 m272.pep QSXSPDLXLLX || :||| ||| g272
QSSDPDLELLX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1113>:
TABLE-US-01394 a272.seq 1 ATGACCGCAA AGGAAGAACT GTTCGCATGG
CTGCGCCATA TGAACAAAAA 51 CAAAGGTTCC GACCTGTTCG TGACGACCCA
TTTCCCGCCC GCAATGAAGC 101 TGGACGGCAA AATCACCCGC ATCACGGACG
AACCGCTGAC GGCGGAAAAA 151 TGTATGGAAA TCGCCTTTTC GATTATGAGT
GCGAAGCAGG CGGAAGAATT 201 TTCATCGACC AACGAGTGCA ACTTCGCCAT
CAGTCTGCCG GACACCAGCC 251 GCTTCCGCGT CAATGCGATG ATACAGCGCG
GTGCGACGGC GTTGGTATTC 301 CGTGCGATTA CCAGCAAGAT TCCCAAGTTT
GAAAGCCTGA ACCTGCCGCC 351 GGTCTTGAAG GATGTCGCGC TGAAAAAACG
CGGGCTGGTT ATTTTTGTCG 401 GCGGCACCGG CTCGGGCAAA TCGACTTCGC
TTGCCTCGCT TATCGACTAC 451 CGCAATGAAA ATTCGTTCGG ACACATCATC
ACCATCGAAG ACCCGATCGA 501 GTTTGTCCAC GAACACAAAA ACTGCATCAT
CACCCAGCGC GAGGTCGGCG 551 TGGATACGGA AAACTGGATG GCGGCGTTGA
AAAACACGCT GCGTCAGGCA 601 CCGGATGTGA TTCTGATCGG CGAAATCCGC
GACCGCGAAA CAATGGACTA 651 CGCCATTGCT TTTGCCGAAA CGGGGCATTT
GTGTATGGCG ACGCTGCACG 701 CCAACAGCAC CAATCAGGCA CTCGACCGCA
TCATCAACTT TTTCCCCGAG 751 GAGCGGCGCG AACAATTGCT GACGGATTTG
TCGCTCAACC TTCAGGCATT 801 TATTTCGCAA CGCCTCGTTC CGCGAGACGG
CGGCAAGGGC AGGGTGGCGG 851 CAGTCGAGGT GCTGCTCAAT TCGCCCCTGA
TTTCGGAGTT GATTCACAAC 901 GGCAATATCC ATGAAATCAA AGAAGTGATG
AAAAAATCCA CTACCCTGGG 951 TATGCAGACT TTCGACCAAC ACCTTTACCA
ATTGTATGAA AAAGGCGAGA 1001 TTTCCTTGCA GGATGCCTTG AAAAATGCCG
ATTCCGCACA CGATTTGCGT 1051 TTGGCGGTAC AGTTGCGCAG CCGCCAGGCG
CAAAGTTCCG GTCCCGATTT 1101 GGAACTGCTC TGA
This corresponds to the amino acid sequence <SEQ ID 1114; ORF
272.a>:
TABLE-US-01395 a272.pep 1 MTAKEELFAW LRHMNKNKGS DLFVTTHFPP
AMKLDGKITR ITDEPLTAEK 51 CMEIAFSIMS AKQAEEFSST NECNFAISLP
DTSRFRVNAM IQRGATALVF 101 RAITSKIPKF ESLNLPPVLK DVALKKRGLV
IFVGGTGSGK STSLASLIDY 151 RNENSFGHII TIEDPIEFVH EHKNCIITQR
EVGVDTENWM AALKNTLRQA 201 PDVILIGEIR DRETMDYAIA FAETGHLCMA
TLHANSTNQA LDRIINFFPE 251 ERREQLLTDL SLNLQAFISQ RLVPRDGGKG
RVAAVEVLLN SPLISELIHN 301 GNIHEIKEVM KKSTTLGMQT FDQHLYQLYE
KGEISLQDAL KNADSAHDLR 351 LAVQLRSRQA QSSGPDLELL * m272/a272 97.6%
identity in 370 aa overlap 10 20 30 40 50 60 m272.pep
MTAKEELFAWLRHMXQNKGSDLFVTTHFPPAMKLDGKITRITDEPLTAEKCMEIAFSIMS
|||||||||||||| :|||||||||||||||||||||||||||||||||||||||||||| a272
MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDEPLTAEKCMEIAFSIMS 10 20
30 40 50 60 70 80 90 100 110 120 m272.pep
AKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRTITSKIPKFESLNLPPVLK
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| a272
AKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRAITSKIPKFESLNLPPVLK 70 80
90 100 110 120 130 140 150 160 170 180 m272.pep
DVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHIITIEDPIEFVHEHKNCIITQR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a272
DVALKKRGLVIFVGGLGSGKSTSLASLIDYRNENSFGHIITIEDPIEFVHEHKNCIITQR 130
140 150 160 170 180 190 200 210 220 230 240 m272.pep
EVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYAIAFAELGHLCMATLHANSTNQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a272
EVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYAIAFAELGHLCMATLHANSTNQA 190
200 210 220 230 240 250 260 270 280 290 300 m272.pep
LDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRDGGKGRVAAVEVLLNSPLISELIHN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a272
LDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRDGGKGRVAAVEVLLNSPLISELIHN 250
260 270 280 290 300 310 320 330 340 350 360 m272.pep
GNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDISLQEALKNADSAHDLRLAVQLRSRRA
||||||||||||||||||||||||||||||||:||||:||||||||||||||||||||:| a272
GNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGEISLQDALKNADSAHDLRLAVQLRSRQA 310
320 330 340 350 360 370 m272.pep QSXSPDLXLLX || :||| ||| a272
QSSGPDLELLX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1115>:
TABLE-US-01396 g273.seq 1 atgagtcttc aggcggtatt tatatacccc
ccaagccgta ccgcacaata 51 caacgaaaat caggaaaacg gcggtaaagc
tcataaacag ggacaaagcg 101 gcaaacacac cgaccgccgt caggatatag
gcgtattcga ggccggaact 151 ccattcaccg ttttcctgcc gtttcttgtc
gcttttgaaa taaaggatga 201 tgccggcaag cagcgcggca gccgcgcccg
acattggcat tgtgttcatt 251 gttgttcctt aacggttaaa aacccgcccg
gccgtgcaac cgttttaagg 301 cgggaaattg caaaatttgt ttgcgggcgc
gtgccgctga aatcaaggcg 351 gtttgagaag tgtttccnac gcgcccgccc
tatgtgccga aatattattt 401 gtcgctcacc tgcaaaatcg ccaagaacgc
gctttgcgga atttccacgt 451 tgcccacttg tttcatacgg cgtttgcctg
ctttttgttt ttcaagcagt 501 tttttcttac gcgtaa
This corresponds to the amino acid sequence <SEQ ID 1116; ORF
273.ng>:
TABLE-US-01397 g273.pep 1 MSLQAVFIYP PSRTAQYNEN QENGGKAHKQ
GQSGKHTDRR QDIGVFEAGT 51 PFTVFLPFLV AFEIKDDAGK QRGSRARHWH
CVHCCSLTVK NPPGRATVLR 101 REIAKFVCGR VPLKSRRFEK CFXRARPMCR
NIICRSPAKS PRTRFAEFPR 151 CPLVSYGVCL LFVFQAVFSY A*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1117>:
TABLE-US-01398 m273.seq 1 ATGAGTCTTC AGGCGGTATT TATATACCCm
CCAAGCCGTA CCGCACAATA 51 CAACGAAAAT CAGGAAAACG GCGGTAAAGC
TCAyAAACAG GGACAAAGCG 101 GCAAACACGC CGACCGCTGT CAGGATATAG
GCGTATTCAA GGCCGGAACT 151 CCATTCCCCG TTTTCCTGCC GCTTCTTGTC
GCTTTTGAAA TAAAGGATGA 201 TGCCGGCAAG CAGCGCGGCA GCCGCGCCCG
ACATTAGCAT TGTGTTCATT 251 GTTGTTCCTT AATGCTTAAA AACCCGCCTG
TCCGTGCAAC CGTTTTAAGG 301 CGGCAAATTG CAAAATTTGT TTGCGGGCGC
GTGCCCCTGA AATCAGGGCG 351 GTTTGAGGGG TGTTCCCGAC GCGCCGCCCT
GTGTGCCGGA GTTATTTGTC 401 GCTCACCTGC AAAATCGCCA AGAACGCGCT
TTGCGGAATT TCCACATTGC 451 CCACTTGTTT CATACGGCGT TTACCTGCCT
TTTGTkTwTC AAGCAGTTTT 501 TTCTTACGCG TAA
This corresponds to the amino acid sequence <SEQ ID 1118; ORF
273>:
TABLE-US-01399 m273.pep 1 MSLQAVFIYP PSRTAQYNEN QENGGKAHKQ
GQSGKHADRC QDIGVFKAGT 51 PFPVFLPLLV AFEIKDDAGK QRGSRARH*H
CVHCCSLMLK NPPVRATVLR 101 RQIAKFVCGR VPLKSGRFEG CSRRAALCAG
VICRSPAKSP RTRFAEFPHC 151 PLVSYGVYLP FVXQAVFSYA *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 273
shows 86.0% identity over a 171 aa overlap with a predicted ORF
(ORF 273.ng) from N. gonorrhoeae:
TABLE-US-01400 m273/g273 10 20 30 40 50 60 m273.pep
MSLQAVFIYPPSRTAQYNENQENGGKAHKQGQSGKHADRCQDIGVFKAGTPFPVFLPLLV
||||||||||||||||||||||||||||||||||||:|| ||||||:||||| ||||:|| g273
MSLQAVFIYPPSRTAQYNENQENGGKAHKQGQSGKHTDRRQDIGVFEAGTPFTVFLPFLV 10 20
30 40 50 60 70 80 90 100 110 120 m273.pep
AFEIKDDAGKQRGSRARHXHCVHCCSLMLKNPPVRATVLRRQIAKFVCGRVPLKSGRFEG
|||||||||||||||||| |||||||| :|||| |||||||:||||||||||||| ||| g273
AFEIKDDAGKQRGSRARHWHCVHCCSLTVKNPPGRATVLRREIAKFVCGRVPLKSRRFEK 70 80
90 100 110 120 130 140 150 160 170 m273.pep
CSRRA-ALCAGVICRSPAKSPRTRFAEFPHCPLVSYGVYLPFVXQAVFSYAX | || :|
::|||||||||||||||||:|||||||| | || |||||||| g273
CFXRARPMCRNIICRSPAKSPRTRFAEFPRCPLVSYGVCLLFVFQAVFSYAX 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1119>:
TABLE-US-01401 a273.seq 1 ATGAGTCTTC AGGCGGTATT TGTATACCCC
CCAAGCCGTA CCGCACAATA 51 CAACGAAAAT CAGGAAAACG GCGGTAAAGC
TCATAAACAG GGACAAAGCG 101 GCAAACACGC CGACCGCCGT CAGGATATAG
GCGTATTCCA GACCGGAACT 151 CCATTCACCG TTTTCCTGCC GCTTTTTGTC
GCTTTTGAAA TAAAGGATGA 201 TGCCGGCAAG CAGCGCGGCA GCCGCGCCCG
ACATTAGCAT AATGTTCATT 251 GTTGTTCCTT AACGGTTAAA AACCCGCCCG
TCCGTGCAAC CGTTTTTAAG 301 AGGCGGTAAA TCACAAAGTT TGTTGGCGGA
CGTGCTCTCT TACAATCAGG 351 GCGGTTTAAG GGGCATGATG CACTGCCCCG
TGTGCCGGAT ATTATTTGTC 401 GCTCACCTGC AAAATTGCCA AGAACGCGCT
TTGCGGGATT TCCACATTGC 451 CCACTTGTTT CATACGGCGT TTGCCTGCTT
TTTGTTTTTC AAGCAGTTTT 501 TTCTTACGCG TAA
This corresponds to the amino acid sequence <SEQ ID 1120; ORF
273.a>:
TABLE-US-01402 a273.pep 1 MSLQAVFVYP PSRTAQYNEN QENGGKAHKQ
GQSGKHADRR QDIGVFQTGT 51 PFTVFLPLFV AFEIKDDAGK QRGSRARH*H
NVHCCSLTVK NPPVRATVFK 101 RR*ITKFVGG RALLQSGRFK GHDALPRVPD
IICRSPAKLP RTRFAGFPHC 151 PLVSYGVCLL FVFQAVFSYA * m273/a273 80.1%
identity in 171 aa overlap 10 20 30 40 50 60 m273.pep
MSLQAVFIYPPSRTAQYNENQENGGKAHKQGQSGKHADRCQDIGVFKAGTPFPVFLPLLV
|||||||:||||||||||||||||||||||||||||||| ||||||::|||| |||||:| a273
MSLQAVFVYPPSRTAQYNENQENGGKAHKQGQSGKHADRRQDIGVFQTGTPFTVFLPLFV 10 20
30 40 50 60 70 80 90 100 110 119 m273.pep
AFEIKDDAGKQRGSRARHXHCVHCCSLMLKNPPVRATVL-RRQIAKFVCGRVPLKSGRFE
|||||||||||||||||||| |||||| :|||||||||: || |:||| ||: |:||||: a273
AFEIKDDAGKQRGSRARHXHNVHCCSLTVKNPPVRATVFKRRXITKFVGGRALLQSGRFK 70 80
90 100 110 120 120 130 140 150 160 170 m273.pep
GCSRRAALCAGVICRSPAKSPRTRFAEFPHCPLVSYGVYLPFVXQAVFSYAX | : : :|||||||
|||||| ||||||||||| | || |||||||| a273
GHDALPRV-PDIICRSPAKLPRTRFAGFPHCPLVSYGVCLLFVFQAVFSYAX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1121>:
TABLE-US-01403 g274.seq 1 ATGGCGGGGC CGATTTTTGT CGTCatCGCC
AgcgTCGCTA TGTTTTTTGT 51 CGCGCAGCAG CACGCGACAG ATTTGGTTAC
GGACGATTAT TATAAGGATG 101 GCAAGCATAT CGACATCCAG CTTCATCGGG
ATGAAGAAGC CGTCAGACGG 151 CATATCGGGG TGCAGGTCCT CATTTCTCCC
GATATGAATG CGGCAAAAGT 201 GTTTGTCGGc ggCgagtTTG ACGGCAAACA
GCCTTTGAAC CTGCTGCTGA 251 TGCACCCGAC CCGCAAGGCG GACGATCAAA
CCGTCGCCCT CAAGCCCGTC 301 GGCAGCGCGC AGAACGGCAG GGCGGAATAT
GAGGCGGTgt tcaaAACCCT 351 TCCGCCGGCC AACCACTGGT ATGTGCGCGT
GGAggacgCG GCAGGCGTGT 401 GGCGCGTCGA GAACAAATGG ATTACCAGCC
AGGGCAATGC GGTCGATTTG 451 ACCCCGATGG ACAAACTTTT CAATAATGCA
GGAAGCAAAT AA
This corresponds to the amino acid sequence <SEQ ID 1122; ORF
274.ng>:
TABLE-US-01404 g274.pep 1 MAGPIFVVIA SVAMFFVAQQ HATDLVTDDY
YKDGKHIDIQ LHRDEEAVRR 51 HIGVQVLISP DMNAAKVFVG GEFDGKQPLN
LLLMHPTRKA DDQTVALKPV 101 GSAQNGRAEY EAVFKTLPPA NHWYVRVEDA
AGVWRVENKW ITSQGNAVDL 151 TPMDKLFNNA GSK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1123>:
TABLE-US-01405 m274.seq 1 ATGGCGGGGC CGATTTTTGT CGTCATCGCC
AGCGTCGCTA TGTTTTTTGT 51 CGCGCAGCAG CACGCGACAG ATTTGGTTAC
GGACGATTAT TATAAAGACG 101 GCAAACATAT CGACATCCAG CTTCATCGGG
ATGAAGAAGC CGTCAGACGG 151 CATATCGGGG TGCAGGTTCT CATTTCCCCC
GATATGAATG CGGCAAAAGT 201 GTTTGTCGGC GGCGAGTTTG ACGGCAAACA
GCCTTTGAAC CTGCTGCTGA 251 TGCACCCGAC CCGCAAGGCG GACGATCAAA
CCGTCGCCCT CAAGCCCGTC 301 GGCAGCGCGC AGAACGGCAG GGCGGAATAT
GAGGCGGTGT TCAAAACCCT 351 TTCGCCGACC AACCACTGGT ATGTGCGCGT
GGAGGACGCG GCAGGCGTGT 401 GGCGCGTCGA GAACAAATGG ATTACCAGCC
AAGGCAATGC GGTCGATTTG 451 ACCCCGATGG ACAAGCTTTT CAATAATACT
GAAAGCAAAT AA
This corresponds to the amino acid sequence <SEQ ID 1124; ORF
274>:
TABLE-US-01406 m274.pep 1 MAGPIFVVIA SVAMFFVAQQ HATDLVTDDY
YKDGKHIDIQ LHRDEEAVRR 51 HIGVQVLISP DMNAAKVFVG GEFDGKQPLN
LLLMHPTRKA DDQTVALKPV 101 GSAQNGRAEY EAVFKTLSPT NHWYVRVEDA
AGVWRVENKW ITSQGNAVDL 151 TPMDKLFNNT ESK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 274
shows 97.5% identity over a 163 aa overlap with a predicted ORF
(ORF 274.ng) from N. gonorrhoeae:
TABLE-US-01407 g274/m274 10 20 30 40 50 60 g274.pep
MAGPIFVVIASVAMFFVAQQHATDLVTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m274
MAGPIFVVIASVAMFFVAQQHATDLVTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISP 10 20
30 40 50 60 70 80 90 100 110 120 g274.pep
DMNAAKVFVGGEFDGKQPLNLLLMHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |: m274
DMNAAKVFVGGEFDGKQPLNLLLMHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPT 70 80
90 100 110 120 130 140 150 160 g274.pep
NHWYVRVEDAAGVWRVENKWITSQGNAVDLTPMDKLFNNAGSKX
|||||||||||||||||||||||||||||||||||||||: ||| m274
NHWYVRVEDAAGVWRVENKWITSQGNAVDLTPMDKLFNNTESKX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1125>:
TABLE-US-01408 a274.seq 1 ATGGCGGGGC CGATTTTTGT CGTCATCGCC
AGCGTCGCTA TGTTTTTTGT 51 CGCGCAGCAG CACGCGACAG ATTTGGTTAC
GGACGATTAT TATAAAGACG 101 GCAAGCATAT CGACATCCAG CTTCATCGGG
ATGAAGAAGC CGTCAGACGG 151 CATATCGGGG TGCAGGTTCT CATTTCCCCC
GATATGAATG CGGCAAAAGT 201 GTTTGTCGGC GGCGAGTTTG ACGGCAAACA
GCCTTTGAAC CTGCTGCTGA 251 TGCACCCGAC CCGCAAGGCG GACGATCAAA
CCGTCGCCCT CAAGCCCGTC 301 GGCAGCGCGC AGAACGGCAG GGCGGAATAT
GAGGCGGTGT TCAAAACCCT 351 TTCGCCGACC AACCACTGGT ATGTGCGCGT
GGAGGACGCG GCAGGCGTGT 401 GGCGCGTCGA GAACAAATGG ATTACCAGCC
AAGGCAATGC GGTCGATTTG 451 ACCCCGATGG ACAAACTTTT CAATAATACT
GAAAGCAAAT AA
This corresponds to the amino acid sequence <SEQ ID 1126; ORF
274.a>:
TABLE-US-01409 a274.pep 1 MAGPIFVVIA SVAMFFVAQQ HATDLVTDDY
YKDGKHIDIQ LHRDEEAVRR 51 HIGVQVLISP DMNAAKVFVG GEFDGKQPLN
LLLMHPTRKA DDQTVALKPV 101 GSAQNGRAEY EAVFKTLSPT NHWYVRVEDA
AGVWRVENKW ITSQGNAVDL 151 TPMDKLFNNT ESK* m274/a274 100.0% identity
in 163 aa overlap 10 20 30 40 50 60 m274.pep
MAGPIFVVIASVAMFFVAQQHATDLVTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a274
MAGPIFVVIASVAMFFVAQQHATDLVTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISP 10 20
30 40 50 60 70 80 90 100 110 120 m274.pep
DMNAAKVFVGGEFDGKQPLNLLLMHPTRKADDQTVALKPVGSAQNGRAEYEAVEKTLSPT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a274
DMNAAKVFVGGEFDGKQPLNLLLMHPTRKADDQTVALKPVGSAQNGRAEYEAVEKTLSPT 70 80
90 100 110 120 130 140 150 160 m274.pep
NHWYVRVEDAAGVWRVENKWITSQGNAVDLTPMDKLFNNTESKX
|||||||||||||||||||||||||||||||||||||||||||| a274
NHWYVRVEDAAGVWRVENKWITSQGNAVDLTPMDKLFNNTESKX 130 140 150 160
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1127>:
TABLE-US-01410 g276.seq 1 atgattttgc cgccatccat gacgatgatg
cggtcggcgg attcgacggt 51 ggtcaggcgg tgggcgacga tgatgccggt
gcggttttcc atcaggcgtt 101 cgagcgcttg ttggacgagg cgttcggatt
cgttgtccaa tgcgctggtg 151 gcttcgtcca ataataatat cggcgcgtct
ttcaaaatgg cgcgggcgat 201 ggcgacgcgt tgccgctgtc cgccggataa
gttgctgccg ttcgatccga 251 tgggctggtg cagtccgagc ggggatgcgt
cgatcaggct ttgcaggttg 301 gcggcttgga gggcggacag gacttcggct
tcgcccgcgt cgggacggct 351 gtatcggacg ttttcaaaca gggtgtcgtc
aaacaggaat acgtcttggg 401 agacgagggc gaattgggcg cgcaggcagt
cgagtttgat gtcggcgatg 451 tcgataccgt ctatgcagat gttgccggca
gacggttcga caaagcgggg 501 cagaaggttg acgacggtgg atttgccgct
gccggaacgt ccgaccaggg 551 cgacgcgttc gccttgtctg atgtcgaggt
tgaagttgtc gagggctttg 601 atgccgtctg aacggtattc gacatcgacg
ttgcggaagc tgatgcgccc 651 ttcgacacgc tgcggcgcga gcgtgccttt
gtcctgttcg ggcggggtgt 701 cgagaaatgc acatacgccg tcggcggcga
ggaacatcgt ctgcataggg 751 atgctgatgt tggcaaggct tttgatgggg
gcgtacattt gcagcatcgc 801 gacgatgaat gccataaatt cgccgatggt
ggtgtag
This corresponds to the amino acid sequence <SEQ ID 1128; ORF
276.ng>:
TABLE-US-01411 g276.pep 1 MILPPSMTMM RSADSTVVRR WATMMPVRFS
IRRSSACWTR RSDSLSNALV 51 ASSNNNIGAS FKMARAMATR CRCPPDKLLP
FDPMGWCSPS GDASIRLCRL 101 AAWRADRTSA SPASGRLYRT FSNRVSSNRN
TSWETRANWA RRQSSLMSAM 151 SIPSMQMLPA DGSTKRGRRL TTVDLPLPER
PTRATRSPCL MSRLKLSRAL 201 MPSERYSTST LRKLMRPSTR CGASVPLSCS
GGVSRNAHTP SAARNIVCIG 251 MLMLARLLMG AYICSIATMN AINSPMVV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1129>:
TABLE-US-01412 m276.seq 1 ATGATTTTGC CGTCGTCCAT CACGATGATG
CGGTCGGCCC CTTCGATGGT 51 GGTCAGGCGG TGGGCGACGA TGATGCCGGT
GCGGTTTTCC ATCAGGCGTT 101 CGAGCGCCTG TTGGACGAGG CGTTCGGATT
CGTTGTCTAA TGCGCTGGTG 151 GCTTCGTCCA ATAATAATAT CGGCGCGTCT
TTCAAAATGG CGCGGGCAAT 201 GGCGACGCGT TGCCGCTGTC CGCCGGATAA
GTTGCTGCCG TTCGATCCGA 251 TGGGCTGGTG CAGTCCGAGC GGGGAGCTGT
CAATCAGGCT TTGCAGGTTG 301 GCGGTTTGGA GGGCGAACAG GACTTCGGCT
TCGCCCGCGT CGGGACGGCT 351 GTATCGGACG TTTTCAAACA GGGTGTCGTC
AAACAGGAAT ACGTCTTGGG 401 AGACGAGGGC GAATTGGGCG CGCAGGCAGT
CGAGTTTGAT GTCGGCGATG 451 TCGATACCGT CTATGCAGAT GTTGCCGGCA
GACGGTTCGA CAAAGCGGGG 501 CAGCAGGTTG ACGACGGTGG ATTTGCCGCT
GCCGGAACGT CCGACCAGGG 551 CGACGCGTTC GCCTTGTCTG ATGTCGAGGT
TGAAGTTGTC GAGGGCTTTG 601 ATGCCGTCTG AACGGTATTC GACATCGACG
TTGCGGAAGC TGATGCGCCC 651 TTCGACACGC TGCGGTGCGA GCGTGCCCTT
GTCCTGTTCG GGCGGGGTGT 701 CGAGAAATGC ACATACACCG TCGGCGGCGA
GGAACATCGT CTGCATAGGG 751 ATGCTGATGT TGGCAAGGCT TTTGATGGGG
GCGTACATTT GCAGCATCGC 801 GACGATGAAT GCCATAAATT CGCCGATGGT
GGTGTAG
This corresponds to the amino acid sequence <SEQ ID 1130; ORF
276>:
TABLE-US-01413 m276.pep 1 MILPSSITMM RSAPSMVVRR WATMMPVRFS
IRRSSACWTR RSDSLSNALV 51 ASSNNNIGAS FKMARAMATR CRCPPDKLLP
FDPMGWCSPS GELSIRLCRL 101 AVWRANRTSA SPASGRLYRT FSNRVSSNRN
TSWETRANWA RRQSSLMSAM 151 SIPSMQMLPA DGSTKRGSRL TTVDLPLPER
PTRATRSPCL MSRLKLSRAL 201 MPSERYSTST LRKLMRPSTR CGASVPLSCS
GGVSRNAHTP SAARNIVCIG 251 MLMLARLLMG AYICSIATMN AINSPMVV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 276
shows 96.8% identity over a 278 aa overlap with a predicted ORF
(ORF 276.ng) from N. gonorrhoeae:
TABLE-US-01414 m276/g276 10 20 30 40 50 60 m276.pep
MILPSSITMMRSAPSMVVRRWATMMPVRFSIRRSSACWTRRSDSLSNALVASSNNNIGAS ||||
|:|||||| | ||||||||||||||||||||||||||||||||||||||||||||| g276
MILPPSMTMMRSADSTVVRRWATMMPVRFSIRRSSACWTRRSDSLSNALVASSNNNIGAS 10 20
30 40 50 60 70 80 90 100 110 120 m276.pep
FKMARAMATRCRCPPDKLLPFDPMGWCSPSGELSIRLCRLAVWRANRTSASPASGRLYRT
|||||||||||||||||||||||||||||||: ||||||||:|||:|||||||||||||| g276
FKMARAMATRCRCPPDKLLPFDPMGWCSPSGDASIRLCRLAAWRADRTSASPASGRLYRT 70 80
90 100 110 120 130 140 150 160 170 180 m276.pep
FSNRVSSNRNTSWETRANWARRQSSLMSAMSIPSMQMLPADGSTKRGSRLTTVDLPLPER
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| g276
FSNRVSSNRNTSWETRANWARRQSSLMSAMSIPSMQMLPADGSTKRGRRLTTVDLPLPER 130
140 150 160 170 180 190 200 210 220 230 240 m276.pep
PTRATRSPCLMSRLKLSRALMPSERYSTSTLRKLMRPSTRCGASVPLSCSGGVSRNAHTP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g276
PTRATRSPCLMSRLKLSRALMPSERYSTSTLRKLMRPSTRCGASVPLSCSGGVSRNAHTP 190
200 210 220 230 240 250 260 270 279 m276.pep
SAARNIVCIGMLMLARLLMGAYICSIATMNAINSPMVVX
||||||||||||||||||||||||||||||||||||||| g276
SAARNIVCIGMLMLARLLMGAYICSIATMNAINSPMVVX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1131>:
TABLE-US-01415 a276.seq 1 ATGATTTTGC CGTCGTCCAT TACGATGATG
CGGTCGGCCC CTTCGATGGT 51 GGTCAGGCGG TGGGCGACGA TGATGCCGGT
GCGGTTTTCC ATCAGGCGTT 101 CGAGCGCCTG TTGGACGAGG CGTTCGGATT
CGTTGTCCAA TGCGCTGGTG 151 GCTTCGTCCA ATAATAATAT CGGCGCGTCT
TTCAAAATGG CGCGGGCAAT 201 GGCAACGCGT TGCCGCTGTC CGCCGGATAA
GTTGCTGCCG TTCGATCCGA 251 TGGGCTGGTG CAGTCCGAGC GGTGATGCGT
CGATCAGGCT TTGCAGGTTA 301 GCGGCTTGGA GGGCGGATAG GACTTCGGCT
TCGCCCGCGT CGGGACGGCT 351 ATATCGGACG TTTTCAAACA GGGTGTCGTC
AAACAGGAAT ACGTCTTGGG 401 AGACGAGGGC AAATTGGGCG CGCAGGCAGT
CGAGTTTGAT GTCGGCGATG 451 TCGATACCGT CTATGCAGAT GTTGCCGGCA
GACGGTTCGA CAAAGCGGGG 501 CAGCAGGTTG ACGACGGTGG ATTTGCCGCT
GCCGGAACGT CCGACCAGGG 551 CGACGCGTTC GCCTTGTCTG ATGTCGAGGT
TGAAGCCGTC GAGGGCTTTG 601 ATGCCGTCCG AACGGTATTC GACATCGACG
TTGCGGAAGC TGATGCGCCC 651 TTCGACACGC TGCGGTGCGA GCGTGCCTTT
GTCCTGTTCG GGCGGGGTGT 701 CGAGAAATGC ACATACGCCG TCGGCGGCGA
GGAACATCGT CTGCATAGGG 751 ATGCTAATGT TGGCAAGGCT TTTGATGGGG
GCGTACATTT GCAGCATCGC 801 GACGATGAAT GCCATAAATT CGCCGATGGT
GGTGTAG
This corresponds to the amino acid sequence <SEQ ID 1132; ORF
276.a>:
TABLE-US-01416 a276.pep 1 MILPSSITMM RSAPSMVVRR WATMMPVRFS
IRRSSACWTR RSDSLSNALV 51 ASSNNNIGAS FKMARAMATR CRCPPDKLLP
FDPMGWCSPS GDASIRLCRL 101 AAWRADRTSA SPASGRLYRT FSNRVSSNRN
TSWETRANWA RRQSSLMSAM 151 SIPSMQMLPA DGSTKRGSRL TTVDLPLPER
PTRATRSPCL MSRLKPSRAL 201 MPSERYSTST LRKLMRPSTR CGASVPLSCS
GGVSRNAHTP SAARNIVCIG 251 MLMLARLLMG AYICSIATMN AINSPMVV* m276/a276
98.2% identity in 278 aa overlap 10 20 30 40 50 60 m276.pep
MILPSSITMMRSAPSMVVRRWATMMPVRFSIRRSSACWTRRSDSLSNALVASSNNNIGAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a276
MILPSSITMMRSAPSMVVRRWATMMPVRFSIRRSSACWTRRSDSLSNALVASSNNNIGAS 10 20
30 40 50 60 70 80 90 100 110 120 m276.pep
FKMARAMATRCRCPPDKLLPFDPMGWCSPSGELSIRLCRLAVWRANRTSASPASGRLYRT
|||||||||||||||||||||||||||||||: ||||||||:|||:|||||||||||||| a276
FKMARAMATRCRCPPDKLLPFDPMGWCSPSGDASIRLCRLAAWRADRTSASPASGRLYRT 70 80
90 100 110 120 130 140 150 160 170 180 m276.pep
FSNRVSSNRNTSWETRANWARRQSSLMSAMSIPSMQMLPADGSTKRGSRLTTVDLPLPER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a276
FSNRVSSNRNTSWETRANWARRQSSLMSAMSIPSMQMLPADGSTKRGSRLTTVDLPLPER 130
140 150 160 170 180 190 200 210 220 230 240 m276.pep
PTRATRSPCLMSRLKLSRALMPSERYSTSTLRKLMRPSTRCGASVPLSCSGGVSRNAHTP
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a276
PTRATRSPCLMSRLKPSRALMPSERYSTSTLRKLMRPSTRCGASVPLSCSGGVSRNAHTP 190
200 210 220 230 240 250 260 270 279 m276.pep
SAARNIVCIGMLMLARLLMGAYICSIATMNAINSPMVVX
||||||||||||||||||||||||||||||||||||||| a276
SAARNIVCIGMLMLARLLMGAYICSIATMNAINSPMVVX 250 260 270
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1133>:
TABLE-US-01417 g277.seq (partial) 1 ..atggtacacg tcgccgtagc
ttacggtatt gccgtccggc gtttttgccc 51 aaacgaggtc atagacgttt
tccacgcctt gcaggtacat cgccaagcgt 101 tcgatgccgt aggtaatttc
gccgagtacg ggcgtgcaat cgataccgcc 151 gacttgttgg aaataggtaa
actgggttac ttccatgccg ttgagccaga 201 cttcccagcc caaaccccac
gcaccgaggg tggggttttc ccagtcgtct 251 tcgacaaagc ggatgtcgtg
gactttggga tcgatgccca attcgcgcag 301 ggagtcgaga tagaggtctt
ggatattggc gggggcgggt ttgagggcga 351 cttggaattg gtaatagtgt
tgcaggcggt tggggttgtc gccgtagcgg 401 ccgtctttgg ggcggcggct
gggttggacg taggcggcaa accaaggctc 451 ggggccgagc gcgcgcaggc
aggtggcggg atgggatgtg ccggcaccga 501 cttccatgtc gaagggttgg
atgacggtgc agcctttgtc tgcccagaag 551 gtttgcagtt tgaagatgat
ttgttggaag gtaagcatgg cttattgttc 601 gataaaataa aggttttatt
ttactgtttc catagccgct tgaatagatt 651 tatctcgaag acagcctga
This corresponds to the amino acid sequence <SEQ ID 1134; ORF
277.ng>:
TABLE-US-01418 g277.pep (partial) 1 ..MVHVAVAYGI AVRRFCPNEV
IDVFHALQVH RQAFDAVGNF AEYGRAIDTA 51 DLLEIGKLGY FHAVEPDFPA
QTPRTEGGVF PVVFDKADVV DFGIDAQFAQ 101 GVEIEVLDIG GGGFEGDLEL
VIVLQAVGVV AVAAVFGAAA GLDVGGKPRL 151 GAERAQAGGG MGCAGTDFHV
EGLDDGAAFV CPEGLQFEDD LLEGKHGLLF 201 DKIKVLFYCF HSRLNRFISK TA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1135>:
TABLE-US-01419 m277.seq 1 ATGCCCCGCT TTGAGGACAA GCTCGTAGGC
AGGCAGGGCG AGGGCGGCGT 51 TTTCTTCGGC AAGCAGGCGT TTGGCTTGCG
CTTCGTAGTC GTTGAACTGG 101 CGCAGCAGCC AGTCGGCATC GCTGTATTCG
AAGTTGTAGG TGGATTGCTC 151 GACTTCGTTT TGGTGGTACA CGTCGCCGTA
GGTGACGGTG TTGCCGTCGA 201 GCGTTTTTGC CCAAACGAGG TCGTAGACGT
TTTCTACACC TTGCAAGTAC 251 ATCGCCAAGC GTTCGATGCC GTAGGTGATT
TCGCCGAGTA CGGGCGTGCA 301 GTCGATGCCG CCGACTTGTT GGAAATAGGT
AAACTGGGTT ACTTCCATGC 351 CGTTGAGCCA GACTTCCCAG CCCAAACCCC
ACGCGCCGAG GGTGGGGTTT 401 TCCCAGTCGT CTTCGACAAA GCGGATGTCG
TGGACTTTGG GATCGATGCC 451 CAATTCGCGC AGAGAGTCGA GATAGAGGTC
TTGGATATTG GCGGGAGCGG 501 GCTTGAGGGC GACTTGGAAT TGGTAATAGT
GTTGCAGGCG GTTGGGGTTG 551 TCGCCGTAGC GGCCGTCTTT GGGGCGGCGG
CTGGGTTGGA CGTAGGCGGC 601 AAACCAAGGC TCGGGGCCGA GTGCGCGCAG
GCAGGTGGCG GGATGGGATG 651 TGCCGGCACC GACTTCCATG TCGAAGGGTT
GGATGACGGT GCAGCCTTTG 701 TCTGCCCAGA ATGTTTGCAG TTTGAAGATG
ATTTGTTGGA AGGTAAGCAT 751 GGCTTATGA
This corresponds to the amino acid sequence <SEQ ID 1136; ORF
277>:
TABLE-US-01420 m277.pep 1 MPRFEDKLVG RQGEGGVFFG KQAFGLRFVV
VELAQQPVGI AVFEVVGGLL 51 DFVLVVHVAV GDGVAVERFC PNEVVDVFYT
LQVHRQAFDA VGDFAEYGRA 101 VDAADLLEIG KLGYFHAVEP DFPAQTPRAE
GGVFPVVFDK ADVVDFGIDA 151 QFAQRVEIEV LDIGGSGLEG DLELVIVLQA
VGVVAVAAVF GAAAGLDVGG 201 KPRLGAECAQ AGGGMGCAGT DFHVEGLDDG
AAFVCPECLQ FEDDLLEGKH 251 GL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 277
shows 90.0% identity over a 221 aa overlap with a predicted ORF
(ORF 277.ng) from N. gonorrhoeae:
TABLE-US-01421 g277/m277 10 20 30 g277.pep
MVHVAVAYGIAVRRFCPNEVIDVFHALQVH :|||||: |:||:|||||||:|||::|||| m277
GLRFVVVELAQQPVGIAVFEVVGGLLDFVLVVHVAVGDGVAVERFCPNEVVDVFYTLQVH 30 40
50 60 70 80 40 50 60 70 80 90 g277.pep
RQAFDAVGNFAEYGRAIDTADLLEIGKLGYFHAVEPDFPAQTPRTEGGVFPVVFDKADVV
||||||||:|||||||:|:|||||||||||||||||||||||||:||||||||||||||| m277
RQAFDAVGDFAEYGRAVDAADLLEIGKLGYFHAVEPDFPAQTPRAEGGVFPVVFDKADVV 90 100
110 120 130 140 100 110 120 130 140 150 g277.pep
DFGIDAQFAQGVEIEVLDIGGGGFEGDLELVIVLQAVGVVAVAAVFGAAAGLDVGGKPRL
|||||||||| ||||||||||:|:|||||||||||||||||||||||||||||||||||| m277
DFGIDAQFAQRVEIEVLDIGGSGLEGDLELVIVLQAVGVVAVAAVFGAAAGLDVGGKPRL 150
160 170 180 190 200 160 170 180 190 200 g277.pep
GAERAQAGGGMGCAGTDFHVEGLDDGAAFVCPEGLQFEDDLLEGKHGLL |||
||||||||||||||||||||||||||||| |||||||||||||| m277
GAECAQAGGGMGCAGTDFHVEGLDDGAAFVCPECLQFEDDLLEGKHGLX 210 220 230 240
250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1137>:
TABLE-US-01422 a277.seq 1 ATGCCCCGCT TTGAGGACAA GCTCGTAGGC
AGGCAGGGCG AGGGCGGCGT 51 TTTCTTCGGC AAGCAGGCGT TTGGCTTGCG
CTTCGTAGTC GTTGAACTGG 101 CGCAGCAGCC AATCGGCATC GCTGTATTCG
AAGTTGTAGG TGGATTGTTC 151 GACTTCGTTT TGGTGGTACA CGTCGCCGTA
AGTTACTGTA TTACCGTCCA 201 GCGTTTTTGC CCAAACGAGG TCATAGACGT
TTTCCACGCC TTGCAGGTAC 251 ATCGCCAAGC GTTCGATGCC GTAGGTGATT
TCGCCGAGTA CGGGGGTGCA 301 GTCGATGCCG CCGACTTGTT GGAAATAGGT
GAACTGGGTT ACTTCCATAC 351 CGTTGAGCCA GACTTCCCAG CCCAAACCCC
ACGCGCCGAG GGTGGGGTTT 401 TCCCAGTCGT CTTCGACAAA GCGGATGTCG
TGCACTTTGG GGTCGATGCC 451 CAATTCGCGC AGGGAGTCGA GATAGAGGTC
TTGGATATTG GCGGGAGCGG 501 GCTTGAGGGC GACTTGGAAT TGGTAATAGT
GTTGCAGGCG GTTGGGGTTG 551 TCGCCGTAGC GACCGTCTTT GGGGCGGCGG
CTGGGTTGGA CGTAGGCGGC 601 AAACCAAGGC TCGGGGCCGA GTGCGCGCAG
ACAGGTGGCG GGATGGGATG 651 TGCCGGCACC GACTTCCATG TCGAAGGGTT
GGATGACGGT GCAGCCTTTG 701 TCTGCCCAGA ATGTTTGCAG TTTGAAGATG
ATTTGTTGGA AGGTAAGCAT 751 GGCTTATGA
This corresponds to the amino acid sequence <SEQ ID 1138; ORF
277.a>:
TABLE-US-01423 a277.pep 1 MPRFEDKLVG RQGEGGVFFG KQAFGLRFVV
VELAQQPIGI AVFEVVGGLF 51 DFVLVVHVAV SYCITVQRFC PNEVIDVFHA
LQVHRQAFDA VGDFAEYGGA 101 VDAADLLEIG ELGYFHTVEP DFPAQTPRAE
GGVFPVVFDK ADVVHFGVDA 151 QFAQGVEIEV LDIGGSGLEG DLELVIVLQA
VGVVAVATVF GAAAGLDVGG 201 KPRLGAECAQ TGGGMGCAGT DFHVEGLDDG
AAFVCPECLQ FEDDLLEGKH 251 GL* m277/a277 92.5% identity in 252 aa
overlap 10 20 30 40 50 60 m277.pep
MPRFEDKLVGRQGEGGVFFGKQAFGLRFVVVELAQQPVGIAVFEVVGGLLDFVLVVHVAV
|||||||||||||||||||||||||||||||||||||:|||||||||||:|||||||||| a277
MPRFEDKLVGRQGEGGVFFGKQAFGLRFVVVELAQQPIGIAVFEVVGGLFDFVLVVHVAV 10 20
30 40 50 60 70 80 90 100 110 120 m277.pep
GDGVAVERFCPNEVVDVFYLLQVHRQAFDAVGDFAEYGRAVDAADLLEIGKLGYFHAVEP :
::|:|||||||:|||::|||||||||||||||||| |||||||||||:|||||:||| a277
SYCITVQRFCPNEVIDVFHALQVHRQAFDAVGDFAEYGGAVDAADLLEIGELGYFHTVEP 70 80
90 100 110 120 130 140 150 160 170 180 m277.pep
DFPAQTPRAEGGVFPVVFDKADVVDFGIDAQFAQRVEIEVLDIGGSGLEGDLELVIVLQA
|||||||||||||||||||||||| ||:|||||| ||||||||||||||||||||||||| a277
DFPAQTPRAEGGVFPVVFDKADVVHFGVDAQFAQGVEIEVLDIGGSGLEGDLELVIVLQA 130
140 150 160 170 180 190 200 210 220 230 240 m277.pep
VGVVAVAAVFGAAAGLDVGGKPRLGAECAQAGGGMGCAGTDFHVEGLDDGAAFVCPECLQ
|||||||:||||||||||||||||||||||:||||||||||||||||||||||||||||| a277
VGVVAVATVFGAAAGLDVGGKPRLGAECAQTGGGMGCAGTDFHVEGLDDGAAFVCPECLQ 190
200 210 220 230 240 250 m277.pep FEDDLLEGKHGLX ||||||||||||| a277
FEDDLLEGKHGLX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1139>:
TABLE-US-01424 g278.seq (partial) 1 ttgcgtgcaa tcacgcccgg
tgcgattttt tcgacagggg cggtcaaagt 51 tgtattaatc ggacctttgc
cgtcgatagg ccgacccaat gcatcgacga 101 cgcgtccgac caattcgcgt
ccgaccggca cttctaaaat acggccggta 151 caggtaaccg tgtcgccttc
tttaatatgt tcgtactcgc ccaacactac 201 ggcaccgacg gagtcgcgct
ccaggttcat cgccaagcct aaagtgttac 251 ccgggaattc gagcatctca
ccttgcattg catctgacaa accatggatg 301 cgaacgatac cgtcagttac
cgaaatcacc gtaccacggg tactcacttc 351 ggcatttaca gacagatttt
cgatcttggc tttaatcaga tcgctaattt 401 cagcaggatt aagctgcatg
aaaactctcc taattcgtca tagtcgtgta 451 caaagcactc agtttgcctt
gtacagacaa atccaaaacc tgatcaccca 501 cttcaacttt ta...
This corresponds to the amino acid sequence <SEQ ID 1140; ORF
278.ng>:
TABLE-US-01425 g278.pep (partial) 1 LRAITPGAIF STGAVKVVLI
GPLPSIGRPN ASTTRPTNSR PTGTSKIRPV 51 QVTVSPSLIC SYSPNTTAPT
ESRSRFIAKP KVLPGNSSIS PCIASDKPWM 101 RTIPSVTEIT VPRVLTSAFT
DRFSILALIR SLISAGLSCM KTLLIRHSRV 151 QSTQFALYRQ IQNLITHFNF ....
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1141>:
TABLE-US-01426 m278.seq.. 1 TTGCGCGCAA TCACGCCCGG TGCGATTTTT
TCGATAGGGG CGGTCAAAGT 51 TGTATTAATC GGGCCTTTGC CGTCGATAGG
CCGACCCAAT GCATCAACGA 101 CGCGTCCGAC CAGTTCGCGT CCGACCGGCA
CTTCCAAGAT ACGACCGGTA 151 CAGGTAACCG TGTCGCCTTC TTTAATGTGT
TCGTACTCGC CCAACACTAC 201 GGCGCCGACG GAGTCGCGCT CCAGGTTCAT
CGCCAAGCCG AAAGTGTTAC 251 CCGGGAATTC GAGCATCTCA CCTTGCATTG
CATCTGACAA ACCATGGATG 301 CGAACGATAC CGTCAGTTAC CGAAATTACC
GTACCACAGG TACGCACTTC 351 GGCATTTACA GACAGATTTT CGATCTTGGC
TTTAATCAAA TCGCTAATTT 401 CAGCAGGATT AAGCTGCATG AAAACTCTCC
TAATTCGTCA TAGTCGTGTA 451 CAAGGCACTC AATTTGCCTT GTACAGACAA
ATCCAAAACC TGATCACCCA 501 CTTCAACTTT TATGCCGCCA ATCAGCTCCG
GTTCGATTTC GACAGAGATT 551 TTCAGCTCGC TGTCGAAACG CTTATTCAGC
ATTTGCACCA ACTCGCCGAC 601 CTGTTTGTCG GTCAACGGAT AGGCACTGTA
AATGACGGCA GATTTGATAT 651 GGTTGAATGA
This corresponds to the amino acid sequence <SEQ ID 1142; ORF
278>:
TABLE-US-01427 m278.pep 1 LRAITPGAIF SIGAVKVVLI GPLPSIGRPN
ASTTRPTSSR PTGTSKIRPV 51 QVTVSPSLMC SYSPNTTAPT ESRSRFIAKP
KVLPGNSSIS PCIASDKPWM 101 RTIPSVTEIT VPQVRTSAFT DRFSILALIK
SLISAGLSCM KTLLIRHSRV 151 QGTQFALYRQ IQNLITHFNF YAANQLRFDF
DRDFQLAVET LIQHLHQLAD 201 LFVGQRIGTV NDGRFDMVE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 278
shows 95.9% identity over a 170 aa overlap with a predicted ORF
(ORF 278.ng) from N. gonorrhoeae:
TABLE-US-01428 g278/m278 10 20 30 40 50 60 g278.pep
LRAITPGAIFSTGAVKVVLIGPLPSIGRPNASTTRPTNSRPTGTSKIRPVQVTVSPSLIC
||||||||||| |||||||||||||||||||||||||:||||||||||||||||||||:| m278
LRAITPGAIFSIGAVKVVLIGPLPSIGRPNASTTRPTSSRPTGTSKIRPVQVTVSPSLMC 10 20
30 40 50 60 70 80 90 100 110 120 g278.pep
SYSPNTTAPTESRSRFIAKPKVLPGNSSISPCIASDKPWMRTIPSVTEITVPRVLTSAFT
||||||||||||||||||||||||||||||||||||||||||||||||||||:|10 ||||| m278
SYSPNTTAPTESRSRFIAKPKVLPGNSSISPCIASDKPWMRTIPSVTEITVPQVRTSAFT 70 80
90 100 110 120 130 140 150 160 170 g278.pep
DRFSILALIRSLISAGLSCMKTLLIRHSRVQSTQFALYRQIQNLITHFNF
|||||||||:|||||||||||||||||||||:|||||||||||||||||| m278
DRFSILALIKSLISAGLSCMKTLLIRHSRVQGTQFALYRQIQNLITHFNFYAANQLRFDF 130
140 150 160 170 180 m278 DRDFQLAVETLIQHLHQLADLFVGQRIGTVNDGRFDMVE*
190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1143>:
TABLE-US-01429 a278.seq 1 TTGCGCGCAA TCACGCCCGG TGCGATTTTT
TCGATAGGGG CGGTCAAAGT 51 TGTATTAATC GGGCCTTTGC CGTCGATAGG
CCGACCCAAT GCATCAACGA 101 CGCGTCCGAC CAGTTCGCGT CCGACCGGCA
CTTCCAAGAT ACGACCGGTA 151 CAGGTAACCG TGTCGCCTTC TTTAATATGT
TCGTGCTCGC CCAACACTAC 201 GGCGCCGACG GAGTCGCGCT CCAGGTTCAT
CGCCAAGCCG AAAGTGTTAC 251 CCGGGAATTC GAGCATCTCA CCTTGCATTG
CATCTGACAA ACCATGGATG 301 CGAACGATAC CGTCAGTTAC CGAAATCACC
GTACCACGGG TACGCACTTC 351 GGCATTTACA GACAGATTTT CGATCTTGGC
TTTAATCAAA TCGCTAATTT 401 CAGCAGGATT AAGCTGCATG AAAACTCTCC
TAATTCGTCA TAGTCGTGTA 451 CAAGGCACTC AATTTGCCTT GTACAGACAA
ATCCAAAACC TGATCACCCA 501 CTTCAACTTT TATGCCGCCA ATCAGCTCCG
GTTCGATTTC GACAGAGATT 551 TTCAGCTCGC TGTCGAAACG CTTATTCAGC
ATTTGCGCCA ACTCGCCGAC 601 CTGTTTGTCG GTCAACGGAT AGGCACTGTA
AATGACGGCA GATTTGATAT 651 GGTTGAATGA
This corresponds to the amino acid sequence <SEQ ID 1144; ORF
278.a>:
TABLE-US-01430 a278.pep 1 LRAITPGAIF SIGAVKVVLI GPLPSIGRPN
ASTTRPTSSR PTGTSKIRPV 51 QVTVSPSLIC SCSPNTTAPT ESRSRFIAKP
KVLPGNSSIS PCIASDKPWM 101 RTIPSVTEIT VPRVRTSAFT DRFSILALIK
SLISAGLSCM KTLLIRHSRV 151 QGTQFALYRQ IQNLITHFNF YAANQLRFDF
DRDFQLAVET LIQHLRQLAD 201 LFVGQRIGTV NDGRFDMVE* m278/a278 98.2%
identity in 219 aa overlap 10 20 30 40 50 60 m278.pep
LRAITPGAIFSIGAVKVVLIGPLPSIGRPNASTTRPTSSRPTGTSKIRPVQVTVSPSLMC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a278
LRAITPGAIFSIGAVKVVLIGPLPSIGRPNASTTRPTSSRPTGTSKIRPVQVTVSPSLIC 10 20
30 40 50 60 70 80 90 100 110 120 m278.pep
SYSPNTTAPTESRSRFIAKPKVLPGNSSISPCIASDKPWMRTIPSVTEITVPQVRTSAFT |
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| a278
SCSPNTTAPTESRSRFIAKPKVLPGNSSISPCIASDKPWMRTIPSVTEITVPRVRTSAFT 70 80
90 100 110 120 130 140 150 160 170 180 m278.pep
DRFSILALIKSLISAGLSCMKTLLIRHSRVQGTQFALYRQIQNLITHFNFYAANQLRFDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a278
DRFSILALIKSLISAGLSCMKTLLIRHSRVQGTQFALYRQIQNLITHFNFYAANQLRFDF 130
140 150 160 170 180 190 200 210 220 m278.pep
DRDFQLAVETLIQHLHQLADLFVGQRIGTVNDGRFDMVEX
|||||||||||||||:|||||||||||||||||||||||| a278
DRDFQLAVETLIQHLRQLADLFVGQRIGTVNDGRFDMVEX 190 200 210 220
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1145>:
TABLE-US-01431 g279.seq 1 atgacgcgga tttgcggctg cttgatttca
acggttttga gtgtttcggc 51 aagtttgtcg gcggcgggtt tcatcaggct
gcaatgggaa ggaacggata 101 ccggcagcgg cagggcgcgt ttggctccgg
cttctttggc ggcagccatg 151 gtgcgtccga cggcggcggc gttgcctgca
atcacgactt gtccgggcga 201 gttgaagttg acggcttcga ccacttcgcc
ctgtgcggat tcggcacaaa 251 tctgcctgac ctgttcatct tccaaaccca
aaatggccgc cattgcgcct 301 acgccttgcg gtacggcgga ctgcatcagt
tcggcgcgca ggcggacgag 351 tttgacggca tcggcaaaat ccaatgcttc
ggcggcgaca agcgcggtgt 401 attcgccgag gctgtgtccg gcaacggcgg
caggcgtttt gccgcccact 451 tccaaatag
This corresponds to the amino acid sequence <SEQ ID 1146; ORF
279.ng>:
TABLE-US-01432 g279.pep 1 MTRICGCLIS TVLSVSASLS AAGFIRLQWE
GTDTGSGRAR LAPASLAAAM 51 VRPTAAALPA ITTCPGELKL TASTTSPCAD
SAQICLTCSS SKPKMAAIAP 101 TPCGTADCIS SARRRTSLTA SAKSNASAAT
SAVYSPRLCP ATAAGVLPPT 151 SK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1147>:
TABLE-US-01433 m279.seq 1 ATAACGCGGA TTTGCGGCTG CTTGATTTCA
ACGGTTTTCA GGGCTTCGGC 51 AAGTTTGTCG GCGGCGGGTT TCATCAGGCT
GCAATGGGAA GGTACGGACA 101 CGGGCAGCGG CAGGGCGCGT TTGGCACCGG
CTTCTTTGGC GGCAGCCATG 151 GCGCGTCCGA CGGCGGCGGC GTTGCCTGCA
ATCACGATTT GTCCGGGTGA 201 GTTGAAGTTG ACGGCTTCGA CCACTTCGCT
TTGGGCGGCT TCGGCACAAA 251 TGGCTTTAAC CTGCTCATCT TCCAAGCCGA
GAATCGCCGC CATTGCGCCC 301 ACGCCTTGCG GTACGGCGGA CTGCATCAGT
TCGGCGCGCA GGCGCACGAG 351 TTTGACCGCG TCGGCAAAAT TCAATGCGCC
GGCGGCAACG AGTGCGGTGT 401 ATTCGCCGAG GCTGTGTCCG GCAACGGCGG
CAGGCGTTTT GCCGCCCGCT 451 TCTAAATAG
This corresponds to the amino acid sequence <SEQ ID 1148; ORF
279>:
TABLE-US-01434 m279.pep 1 ITRICGCLIS TVFRASASLS AAGFIRLQWE
GTDTGSGRAR LAPASLAAAM 51 ARPTAAALPA ITICPGELKL TASTTSLWAA
SAQMALTCSS SKPRIAAIAP 101 TPCGTADCIS SARRRTSLTA SAKFNAPAAT
SAVYSPRLCP ATAAGVLPPA 151 SK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 279
shows 89.5% identity over a 152 aa overlap with a predicted ORF
(ORF 279.ng) from N. gonorrhoeae:
TABLE-US-01435 10 20 30 40 50 60 m279.pep
ITRICGCLISTVFRASASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMARPTAAALPA
:|||||||||||: :|||||||||||||||||||||||||||||||||||:||||||||| g279
MTRICGCLISTVLSVSASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMVRPTAAALPA 10 20
30 40 50 60 70 80 90 100 110 120 m279.pep
ITICPGELKLTASTTSLWAASAQMALTCSSSKPRIAAIAPTPCGTADCISSARRRTSLTA ||
||||||||||||| | |||: ||||||||::||||||||||||||||||||||||| g279
ITTCPGELKLTASTTSPCADSAQICLTCSSSKPKMAAIAPTPCGTADCISSARRRTSLTA 70 80
90 100 110 120 130 140 150 m279.pep
SAKFNAPAATSAVYSPRLCPATAAGVLPPASKX ||| || ||||||||||||||||||||||:|||
g279 SAKSNASAATSAVYSPRLCPATAAGVLPPTSKX 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1149>:
TABLE-US-01436 a279.seq 1 ATGACNCNGA TTTGCGGCTG CTTGATTTCA
ACGGTTTNNA GGGCTTCGGC 51 GAGTTTGTCG GCGGCGGGTT TCATGAGGCT
GCAATGGGAA GGTACNGACA 101 CNGGCAGCGG CAGGGCGCGT TTGGCGCCGG
CTTCTTTGGC GGCAAGCATA 151 GCGCGCTCGA CGGCGGCGGC ATTGCCTGCA
ATCACGACTT GTCCGGGCGA 201 GTTGAAGTTG ACGGCTTCAA CCACTTCATC
CTGTGCGGAT TCGGCGCAAA 251 TTTGTTTTAC CTGTTCATCT TCCAAGCCGA
GAATCGCCGC CATTGCGCCC 301 ACGCCTTGCG GTACGGCGGA CTGCATCAGT
TCGGCGCGCA NGCGCACGAG 351 TTTGACCGCG TCGGCAAAAT CCAATGCGCC
GGCGGCAACN AGTGCGGTGT 401 ATTCGCCGAN GCTGTGTCCG GCAACGGCGG
CAGGCGTTTT GCCGCCCGCT 451 TCCGAATAG
This corresponds to the amino acid sequence <SEQ ID 1150; ORF
279.a>:
TABLE-US-01437 a279.pep 1 MTXICGCLIS TVXRASASLS AAGFMRLQWE
GTDTGSGRAR LAPASLAASI 51 ARSTAAALPA ITTCPGELKL TASTTSSCAD
SAQICFTCSS SKPRIAAIAP 101 TPCGTADCIS SARXRTSLTA SAKSNAPAAT
SAVYSPXLCP ATAAGVLPPA 151 SE* m279/a279 88.2% identity in 152 aa
overlap 10 20 30 40 50 60 m279.pep
ITRICGCLISTVFRASASLSAAGFIRLQWEGTDTGSGRARLAPASLAAAMARPTAAALPA :|
||||||||| |||||||||||:|||||||||||||||||||||||::|| ||||||| a279
MTXICGCLISTVXRASASLSAAGFMRLQWEGTDTGSGRARLAPASLAASIARSTAAALPA 10 20
30 40 50 60 70 80 90 100 110 120 m279.pep
ITICPGELKLTASTTSLWAASAQMALTCSSSKPRIAAIAPTPCGTADCISSARRRTSLTA ||
||||||||||||| | |||: :||||||||||||||||||||||||||| |||||| a279
ITTCPGELKLTASTTSSCADSAQICFTCSSSKPRIAAIAPTPCGTADCISSARXRTSLTA 70 80
90 100 110 120 130 140 150 m279.pep
SAKFNAPAATSAVYSPRLCPATAAGVLPPASKX ||| |||||||||||| ||||||||||||||:|
a279 SAKSNAPAATSAVYSPXLCPATAAGVLPPASEX 130 140 150
Expression of ORF 279
[0329] The primer described in Table 1 for ORF 279 was used to
locate and clone ORF 279.
ORF 279 was cloned in pET and pGex vectors and expressed in E. coli
as above-described. The products of protein expression and
purification were analyzed by SDS-PAGE. FIG. 2A shows the results
of affinity purification and FIG. 2B shows the expression in E.
coli. Purified GST-fusion protein was used to immunize mice whose
sera were used for ELISA (positive result), FACS analysis (FIG.
2C), western blot (FIG. 2D). These experiments confirm that 279 is
a surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 279 are provided in FIG. 6. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 279 and the amino acid sequence encoded thereby is
provided herein. The following partial DNA sequence was identified
in N. gonorrhoeae <SEQ ID 1151>:
TABLE-US-01438 g280.seq 1 atgaaacacc tcaaacttac ccttattgcc
gcattgctgg ccaccgccgc 51 aactgccgca ccccttccgg ttgtaaccag
tttcagcatt ttaggcgacg 101 tagccaaaca aatcggcggt gagcgcgtag
ccgtacaaag cctcgtcgga 151 gccaaccaag atactcatgc ctatcacatg
accagtggcg acattaaaaa 201 aatccgcagt gcaaaactcg tcctgctcaa
cggcttggga cttgaagccg 251 ccgacatcca acgcgccgtc aaacagagca
aagtatccta tgccgaagcg 301 accaaaggca tccaacccct caaagccgaa
gaagaaggcg gacaccatca 351 cgaccaccat cacgaccacg atcatgacca
cgaaggacac caccacgacc 401 acggcgaata tgacccccac gtctggaacg
accctgttct tatgtccgac 451 tatgcccaaa acgtcgctga aaccctgata
aaggccgatc ccgaaggcaa 501 agtttattat caacaacgct tgggcaacta
ccaaatgcag cttaaaaaac 551 tgcacagcga cgcacaagcc gcatttaatg
ccgtccctgc cgccaaacgc 601 aaagtcctga ccgggcacga cgcattttcc
tacatgggca accgctacaa 651 catcagcttc atcgccccgc aaggcgtgag
cagcgaagcc gagccgtccg 701 ccaaacaagt cgccgccatc atccggcaaa
tcaaacgcga aggcatcaaa 751 gccgtattta ccgaaaatat caaagacacc
cgcatggttg accgcatcgc 801 caaagaaacc ggcgtcaacg tcagcggcaa
actgtattcc gacgcactcg 851 gcaacgcgcc cgcagacacc tacatcggca
tgtaccgcca caacgtcgaa 901 gccttgacca acgcgatgaa gcaataa
This corresponds to the amino acid sequence <SEQ ID 1152; ORF
280.ng>:
TABLE-US-01439 g280.pep 1 MKHLKLTLIA ALLATAATAA PLPVVTSFSI
LGDVAKQIGG ERVAVQSLVG 51 ANQDTHAYHM TSGDIKKIRS AKLVLLNGLG
LEAADIQRAV KQSKVSYAEA 101 TKGIQPLKAE EEGGHHHDHH HDHDHDHEGH
HHDHGEYDPH VWNDPVLMSD 151 YAQNVAETLI KADPEGKVYY QQRLGNYQMQ
LKKLHSDAQA AFNAVPAAKR 201 KVLTGHDAFS YMGNRYNISF IAPQGVSSEA
EPSAKQVAAI IRQIKREGIK 251 AVFTENIKDT RMVDRIAKET GVNVSGKLYS
DALGNAPADT YIGMYRHNVE 301 ALTNAMKQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1153>:
TABLE-US-01440 m280.seq 1 ATGAAACACC TCAAACTCAC CCTTATTGCC
GCATTGCTGA CCGCCTCCGC 51 AACTGCCGCC CCCCTGCCGG TTGTAACCAG
CTTCAGCATT TTAGGCGACG 101 TAGCCAAACA AATCGGCGGA GAGCGCGTAT
CCATACAAAG TTTGGTCGGA 151 GCCAACCAAG ATACGCACGC CTATCATATG
ACCAGTGGCG ACATTAAAAA 201 AATCCGCAGT GCAAAACTCG TCCTGCTCAA
CGGCTTAGGA CTTGAAGCTG 251 CCGATGTGCA ACGCGCCGTC AAACAAAGCA
AAGTATCCTA TACCGAAGCG 301 ACCAAAGGCA TCCAACCCCT CAAAGCCGAA
GAAGAAGGCG GACACCATCA 351 CGACCACGAT CATGACCACG AAGGACACCA
CCATGACCAC GGCGAATATG 401 ACCCGCACGT CTGGAACGAC CCCGTCCTTA
TGTCCGCCTA TGCCCAAAAC 451 GTTGCCAAAG CCCTGATAAA GGCCGATCCC
GAAGGCAAAG TTTATTATCA 501 ACAACGCTTG GGCAACTACC AAATGCAGCT
CAAAAAACTG CACAGCGACG 551 CACAAGCCGC ATTTAATGCC GTCCCTGCTG
CCAAACGCAA AGTCCTGACC 601 GGGCACGATG CCTTTTCCTA TATGGGCAAA
CGTTACCATA TCGAATTCAT 651 CGCCCCGCAA GGCGTGAGCA GCGAAGCCGA
GCCTTCGGCC AAACAAGTCG 701 CCGCCATCAT CCGACAAATC AAACGCGAAG
GCATCAAAGC CGTCTTTACC 751 GAAAACATCA AGGACACCCG TATGGTTGAC
CGTATCGCCA AAGAAACCGG 801 TGTCAACGTC AGCGGCAAAC TGTATTCCGA
CGCACTCGGC AACGCGCCCG 851 CAGACACCTA CATCGGAATG TACCGCCACA
ACATCAAAGC CTTGACCAAC 901 GCGATGAAGC AATAA
This corresponds to the amino acid sequence <SEQ ID 1154; ORF
280>:
TABLE-US-01441 m280.pep 1 MKHLKLTLIA ALLTASATAA PLPVVTSFSI
LGDVAKQIGG ERVSIQSLVG 51 ANQDTHAYHM TSGDIKKIRS AKLVLLNGLG
LEAADVQRAV KQSKVSYTEA 101 TKGIQPLKAE EEGGHHHDHD HDHEGHHHDH
GEYDPHVWND PVLMSAYAQN 151 VAKALIKADP EGKVYYQQRL GNYQMQLKKL
HSDAQAAFNA VPAAKRKVLT 201 GHDAFSYMGK RYHIEFIAPQ GVSSEAEPSA
KQVAAIIRQI KREGIKAVFT 251 ENIKDTRMVD RIAKETGVNV SGKLYSDALG
NAPADTYIGM YRHNIKALTN 301 AMKQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 280
shows 93.8% identity over a 308 aa overlap with a predicted ORF
(ORF 280.ng) from N. gonorrhoeae:
TABLE-US-01442 m280/g280 10 20 30 40 50 60 m280.pep
MKHLKLTLIAALLTASATAAPLPVVTSFSILGDVAKQIGGERVSIQSLVGANQDTHAYHM
|||||||||||||:::|||||||||||||||||||||||||||::||||||||||||||| g280
MKHLKLTLIAALLATAATAAPLPVVTSFSILGDVAKQIGGERVAVQSLVGANQDTHAYHM 10 20
30 40 50 60 70 80 90 100 110 119 m280.pep
TSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYTEATKGIQPLKAEEEGGHHHDH-
|||||||||||||||||||||||||:|||||||||||:||||||||||||||||||||| g280
TSGDIKKIRSAKLVLLNGLGLEAADIQRAVKQSKVSYAEATKGIQPLKAEEEGGHHHDHH 70 80
90 100 110 120 120 130 140 150 160 170 m280.pep
---DHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAKALIKADPEGKVYYQQRLGNYQMQ
|||||||||||||||||||||||||| ||||||::|||||||||||||||||||||| g280
HDHDHDHEGHHHDHGEYDPHVWNDPVLMSDYAQNVAETLIKADPEGKVYYQQRLGNYQMQ 130
140 150 160 170 180 180 190 200 210 220 230 m280.pep
LKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIAPQGVSSEAEPSAKQVAAI
|||||||||||||||||||||||||||||||||:||:| ||||||||||||||||||||| g280
LKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGNRYNISFIAPQGVSSEAEPSAKQVAAI 190
200 210 220 230 240 240 250 260 270 280 290 m280.pep
IRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGNAPADTYIGMYRHNIK
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:: g280
IRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGNAPADTYIGMYRHNVE 250
260 270 280 290 300 300 m280.pep ALTNAMKQX ||||||||| g280
ALTNAMKQX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1155>:
TABLE-US-01443 a280.seq 1 ATGAAACACC CCAAACTCAC CCTTATCGCC
GCATTGCTGA CCACTGCCGC 51 AACTGCCGCC CCCCTGCCGG TTGTAACCAG
CTTCAGCATT TTAGGCGACG 101 TAGCCAAACA AATCGGCGGA GAGCGCGTAT
CCATACAAAG TTTGGTCGGA 151 GCCAACCAAG ATACGCACGC CTATCATATG
ACCAGCGGCG ACATTAAAAA 201 AATCCGCAGT GCAAAACTCG TCCTGATTAA
CGGCTTAGGA CTTGAAGCTG 251 CCGACATCCA ACGTGCCGTC AAACAGAGCA
AAGTATCCTA TGCCGAAGCG 301 ACCAAAGGCA TCCAACCCCT CAAAGCCGAA
GAAGAAGGCG GACACCATCA 351 CGACCACGAT CATGACCACG ACCATGACCA
CGAAGGACAC CACCACGACC 401 ACGGCGAATA TGACCCCCAC GTCTGGAACG
ACCCCGTCCT TATGTCCGCC 451 TATGCCCAAA ACGTCGCCGA AGCCCTGATA
AAGGCCGACC CCGAAGGCAA 501 AGTTTATTAT CAACAACGCT TGGGCAACTA
CCAAATGCAG CTCAAAAAAC 551 TGCACAGTGA CGCACAAGCC GCATTTAATG
CCGTCCCTGC CGCCAAACGC 601 AAAGTCCTGA CCGGGCACGA TGCCTTTTCC
TATATGGGCA AACGTTACCA 651 TATCGAATTC ATCGCCCCAC AAGGTGTGAG
CAGCGAAGCC GAGCCTTCAG 701 CCAAACAAGT CGCCGCCATC ATCCGACAAA
TCAAACGCGA AGGCATCAAA 751 GCCGTATTTA CCGAAAATAT CAAAGACACC
CGCATGGTTG ACCGCATCGC 801 CAAAGAAACC GGTGTCAACG TCAGCGGCAA
ACTGTATTCC GACGCACTCG 851 GCAACGCACC CGCAGACACC TACATCGGCA
TGTACCGCCA CAACATCAAA 901 GCCTTAACCA ACGCGATGAA GCAATAA
This corresponds to the amino acid sequence <SEQ ID 1156; ORF
280.a>:
TABLE-US-01444 a280.pep 1 MKHPKLTLIA ALLTTAATAA PLPVVTSFSI
LGDVAKQIGG ERVSIQSLVG 51 ANQDTHAYHM TSGDIKKIRS AKLVLINGLG
LEAADIQRAV KQSKVSYAEA 101 TKGIQPLKAE EEGGHHHDHD HDHDHDHEGH
HHDHGEYDPH VWNDPVLMSA 151 YAQNVAEALI KADPEGKVYY QQRLGNYQMQ
LKKLHSDAQA AFNAVPAAKR 201 KVLTGHDAFS YMGKRYHIEF IAPQGVSSEA
EPSAKQVAAI IRQIKREGIK 251 AVFTENIKDT RMVDRIAKET GVNVSGKLYS
DALGNAPADT YIGMYRHNIK 301 ALTNAMKQ* m280/a280 96.4% identity in 308
aa overlap 10 20 30 40 50 60 m280.pep
MKHLKLTLIAALLTASATAAPLPVVTSFSILGDVAKQIGGERVSIQSLVGANQDTHAYHM |||
||||||||||::|||||||||||||||||||||||||||||||||||||||||||| a280
MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVSIQSLVGANQDTHAYHM 10 20
30 40 50 60 70 80 90 100 110 120 280.pep
TSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYTEATKGIQPLKAEEEGGHHHDHD
|||||||||||||||:|||||||||:|||||||||||:|||||||||||||||||||||| a280
TSGDIKKIRSAKLVLINGLGLEAADIQRAVKQSKVSYAEATKGIQPLKAEEEGGHHHDHD 70 80
90 100 110 120 130 140 150 160 170 m280.pep
HDH----EGHHHDHGEYDPHVWNDPVLMSAYAQNVAKALIKADPEGKVYYQQRLGNYQMQ |||
|||||||||||||||||||||||||||||:||||||||||||||||||||||| a280
HDHDHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAEALIKADPEGKVYYQQRLGNYQMQ 130
140 150 160 170 180 180 190 200 210 220 230 m280.pep
LKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIAPQGVSSEAEPSAKQVAAI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a280
LKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIAPQGVSSEAEPSAKQVAAI 190
200 210 220 230 240 240 250 260 270 280 290 m280.pep
IRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGNAPADTYIGMYRHNIK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a280
IRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYSDALGNAPADTYIGMYRHNIK 250
260 270 280 290 300 300 m280.pep ALTNAMKQX ||||||||| a280
ALTNAMKQX
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1157>:
TABLE-US-01445 g281.seq 1 atgcactacg ccctcgcatc cgtcttctgc
ctgtccctca gcgccgcacc 51 cgtcggcgta ttcctcgtca tgcgccgtat
gagcctgata ggcgacgcat 101 tgagccacgc cgtcctgccc ggtgccgccg
tcggctacat gtttgccggc 151 ttgagcctgc ccgctatggg tgtgggcggg
tttgccgccg gtatgctgat 201 ggcgctgctt gccggactcg tcagccgctt
taccaccctg aaagaagatg 251 ccaactttgc cgccttttac ctgagcagcc
tcgccatcgg cgtaatcctc 301 atcagcaaaa acggcagcag cgtcgattta
ctccacctcc ttttcggatc 351 tgtgcttgcc gtcgatattc ccgcactgca
actcatcgcc gccgtctccg 401 gcctcacgct cattaccctt gccgtcatct
accgccccct ggtgctagaa 451 agcatagacc cccttttcct caagtccgtc
aacggcaaag gcgggctttg 501 gcacgtcatt ttcctcatcc tcgtcgttat
gaacctcgta tccggcttcc 551 aagctctcgg catcctgatg tcggtcggaa
ttatgatgct gcccgccatt 601 accgcccgtt tatgggcaag aaatatgggg
acgctcattc tgttgtccgt 651 cctcatcgcc cttttttgcg gtttgatcgg
gctgctcatt tcctaccaca 701 tcgaaatccc ttccggcccc gccatcatcc
tctgttgcag cgtcctttat 751 cttttttccg tcatactcgg caaagaaggc
ggcatcttgc ccaaatggtt 801 caaaaaccac cgccaccaca ccacctga
This corresponds to the amino acid sequence <SEQ ID 1158; ORF
281.ng>:
TABLE-US-01446 g281.pep 1 MHYALASVFC LSLSAAPVGV FLVMRRMSLI
GDALSHAVLP GAAVGYMFAG 51 LSLPAMGVGG FAAGMLMALL AGLVSRFTTL
KEDANFAAFY LSSLAIGVIL 101 ISKNGSSVDL LHLLFGSVLA VDIPALQLIA
AVSGLTLITL AVIYRPLVLE 151 SIDPLFLKSV NGKGGLWHVI FLILVVMNLV
SGFQALGILM SVGIMMLPAI 201 TARLWARNMG TLILLSVLIA LFCGLIGLLI
SYHIEIPSGP AIILCCSVLY 251 LFSVILGKEG GILPKWFKNH RHHTT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1159>:
TABLE-US-01447 m281.seq (partial) 1 ATGCGCTACG CCCTCGCATC
CGTCTTCTGC CTGTCCCTCA GTGCCGCACC 51 CGTCGGCGTA TTCCTCGTCA
TGCGCCGTAT GAGCCTGATA GGCGACGCAT 101 TGAGCCACGC CGTCCTGCCC
GGTGCCGCCG TCGGCTACAT GTTTGCCGGC 151 TTGAGCCTGC CCGCCATGGG
TTTGGGCGGC GTAGCCGCAG GCATGCTGAT 201 GGCACTGCTT GCCGGACTCG
TCAGCCGCTT CACCACCCTG AAAGAAGATG 251 CCAACTTTGC CGCCTTTTAT
CTCAGCAGCC TCGCCATCGG CGTAGTCCTC 301 GTCAGCAAAA ACGGGAGCAG
CGTCGATTTG CTCCACCTCC TTTTCGGCTC 351 TGTACTTGCC GTCGATATTC
CTGCCCTGCA GCTCATCGCC GCCGTCTCCA 401 GCCTCACGCT CATTACCCTT
GCCGTCATCT ACCGCCCGCT CGTACTCGAA 451 AGCATCGACC CCCTGTTTCT
CAAATCCGTC GGCGGCAAAG GCGGGCTTTG 501 GCACGTCCTC TTTCTCGTCC
TGGTCGTCAT GAACCTCGTA TCCGGCTTTC 551 AAGCCCTCGG CACACTCATG
TCCGTCGGAC TCATGATGCT GCCAGCCATT 601 ACCGCCCGCC TGTGGGCGAA
GCATATGGGC GCACTCATCC TCCTATCCGT 651 TCTGACAGCC CTGCTGTGCG
GCTTGAGCGG ACTGCTCATT TCCTACCACA 701 TCGAAATTCC TTCCGGTCCC
GCCATCATCC TCTGTTGCAG CGTCCTTTAT 751 CTCTTTTCCG TCATACTCGG
CAAAGAAGGC GGCATTCTGA CC..
This corresponds to the amino acid sequence <SEQ ID 1160; ORF
281>:
TABLE-US-01448 m281.pep (partial) 1 MRYALASVFC LSLSAAPVGV
FLVMRRMSLI GDALSHAVLP GAAVGYMFAG 51 LSLPAMGLGG VAAGMLMALL
AGLVSRFTTL KEDANFAAFY LSSLAIGVVL 101 VSKNGSSVDL LHLLFGSVLA
VDIPALQLIA AVSSLTLITL AVIYRPLVLE 151 SIDPLFLKSV GGKGGLWHVL
FLVLVVMNLV SGFQALGTLM SVGLMMLPAI 201 TARLWAKHMG ALILLSVLTA
LLCGLSGLLI SYHIEIPSGP AIILCCSVLY 251 LFSVILGKEG GILT..
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 281
shows 93.5% identity over a 263 aa overlap with a predicted ORF
(ORF 281.ng) from N. gonorrhoeae:
TABLE-US-01449 m281/g281 10 20 30 40 50 60 m281.pep
MRYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVGYMFAGLSLPAMGLGG
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g281
MHYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVGYMFAGLSLPAMGVGG 10 20
30 40 50 60 70 80 90 100 110 120 m281.pep
VAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLA
|||||||||||||||||||||||||||||||||||||:|:||||||||||||||||||| g281
FAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVILISKNGSSVDLLHLLFGSVLA 70 80
90 100 110 120 130 140 150 160 170 180 m281.pep
VDIPALQLIAAVSSLTLITLAVIYRPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLV
|||||||||||||:||||||||||||||||||||||||||:||||||||:||:||||||| g281
VDIPALQLIAAVSGLTLITLAVIYRPLVLESIDPLFLKSVNGKGGLWHVIFLILVVMNLV 130
140 150 160 170 180 190 200 210 220 230 240 m281.pep
SGFQALGTLMSVGLMMLPAITARLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGP
||||||| |||||:||||||||||||::||:||||||| ||:||| |||||||||||||| g281
SGFQALGILMSVGIMMLPAITARLWARNMGTLILLSVLIALFCGLIGLLISYHIEIPSGP 190
200 210 220 230 240 250 260 m281.pep AIILCCSVLYLFSVILGKEGGILT
||||||||||||||||||||||| g281 AIILCCSVLYLFSVILGKEGGILPKWFKNHRHHTTX
250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1161>:
TABLE-US-01450 a281.seq 1 ATGCGCTACG CCCTCGCATC CGTCTTCTGC
CTGTCCCTCA GTGCCGCACC 51 CGTCGGCGTA TTCCTCGTCA TGCGCCGTAT
GAGCCTGATA GGCGACGCAT 101 TGAGCCACGC CGTCCTGCCC GGTGCCGCCG
TCGGCTACAT GTTTGCCGGC 151 TTAAGCCTGC CCGCCATGGG TTTGGGCGGC
GTAGCCGCAG GTATGCTGAT 201 GGCACTGCTT GCCGGACTCG TCAGCCGCTT
CACCACCCTG AAAGAAGATG 251 CCAACTTTGC CGCCTTTTAT CTCAGCAGCC
TCGCCATCGG TGTAGTCCTC 301 GTCAGCAAAA ACGGCAGCAG CGTCGATTTG
CTCCACCTCC TTTTCGGCTC 351 CGTACTTGCC GTCGATATTC CTGCCCTGCA
ACTCATCGCC GCCGTATCCA 401 CCCTCACACT GCTTACCCTT GCCGTCATCT
ACCGCCCGCT CGTACTCGAA 451 AGCATCGACC CCCTGTTTCT CAAATCTGTC
GGCGGCAAAG GCGGGCTTTG 501 GCACGTCCTC TTTCTCGTCC TGGTCGTCAT
GAACCTCGTA TCCGGCTTTC 551 AAGCCCTCGG CACACTCATG TCCGTCGGAC
TTATGATGCT GCCAGCCATT 601 ACCGCCCGCC TATGGGCGAA GCACATGGGC
GCACTCATCC TCCTATCCGT 651 TCTGACAGCC CTGCTGTGCG GCTTGAGCGG
ACTGCTCATT TCCTACCACA 701 TCGAAATTCC TTCCGGTCCC GCCATCATCC
TCTGTTGCAG CGTCCTTTAT 751 CTCTTTTCCG TCATACTCGG CAAAGAAGGC
GGCATTCTGA CCAAATGGCT 801 CAAAAACCAC CGCCACCACA CCACCTGA
This corresponds to the amino acid sequence <SEQ ID 1162; ORF
281.a>:
TABLE-US-01451 a281.pep 1 MRYALASVFC LSLSAAPVGV FLVMRRMSLI
GDALSHAVLP GAAVGYMFAG 51 LSLPAMGLGG VAAGMLMALL AGLVSRFTTL
KEDANFAAFY LSSLAIGVVL 101 VSKNGSSVDL LHLLFGSVLA VDIPALQLIA
AVSTLTLLTL AVIYRPLVLE 151 SIDPLFLKSV GGKGGLWHVL FLVLVVMNLV
SGFQALGTLM SVGLMMLPAI 201 TARLWAKHMG ALILLSVLTA LLCGLSGLLI
SYHIEIPSGP AIILCCSVLY 251 LFSVILGKEG GILTKWLKNH RHHTT* m281/a281
99.2% identity in 264 aa overlap 10 20 30 40 50 60 m281.pep
MRYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVGYMFAGLSLPAMGLGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a281
MRYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVGYMFAGLSLPAMGLGG 10 20
30 40 50 60 70 80 90 100 110 120 m281.pep
VAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a281
VAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLA 70 80
90 100 110 120 130 140 150 160 170 180 m281.pep
VDIPALQLIAAVSSLTLITLAVIYRPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLV
|||||||||||||:|||:|||||||||||||||||||||||||||||||||||||||||| a281
VDIPALQLIAAVSTLTLLTLAVIYRPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLV 130
140 150 160 170 180 190 200 210 220 230 240 m281.pep
SGFQALGTLMSVGLMMLPAITARLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a281
SGFQALGTLMSVGLMMLPAITARLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGP 190
200 210 220 230 240 250 260 m281.pep AIILCCSVLYLFSVILGKEGGILT
|||||||||||||||||||||||| a281 AIILCCSVLYLFSVILGKEGGILTKWLKNHRHHTTX
250 260 270
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1163>:
TABLE-US-01452 g282.seq 1 atgggattgg gtatggaaat cggcaagctg
attgtggctc ttttggtgct 51 gatcaatccg tttagcgcgt tgtcgcttta
ccttgacctg accaacggac 101 acagcacgaa ggagcgcagg aaggtcgcgc
ggacggccgc cgtcgccgtg 151 tttgccgtga ttgcggtatt tgcgctgatc
ggcggtgcgc tattgaaggt 201 tttgggcatc agcgtcggtt cgtttcaggt
cggcggcggg attttggtgc 251 tgctgatcgc catttcgatg atgaacggca
acgacaatcc cgccaagcag 301 aatctcggcg cgcagccgga aacggggcaa
gcgcgccccg cccgcaatgc 351 aggggcgatt gccgtcgtgc ccatcgccat
accgatcacc atcggtccgg 401 gcggtatttc gactgtgatt atttatgctt
cggcagccaa aacgtacagc 451 gatatcgcgc tgattatcgc ggccggtttg
gtggtcagtg cgatttgtta 501 tgccatttta atcgttgccg ggaaggtcag
ccgcctgctg ggcgcgacgg 551 ggctgacgat tttaaaccgc attatgggta
tgatgctggc ggcggtatcg 601 gtggagatta ttgtgtcggg actgaaaacg
atattcccgc aactggcagg 651 ttga
This corresponds to the amino acid sequence <SEQ ID 1164; ORF
282.ng>:
TABLE-US-01453 g282.pep 1 MGLGMEIGKL IVALLVLINP FSALSLYLDL
TNGHSTKERR KVARTAAVAV 51 FAVIAVFALI GGALLKVLGI SVGSFQVGGG
ILVLLIAISM MNGNDNPAKQ 101 NLGAQPETGQ ARPARNAGAI AVVPIAIPIT
IGPGGISTVI IYASAAKTYS 151 DIALIIAAGL VVSAICYAIL IVAGKVSRLL
GATGLTILNR IMGMMLAAVS 201 VEIIVSGLKT IFPQLAG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1165>:
TABLE-US-01454 m282.seq 1 ATGGGATTGG GCATGGAAAT CGGCAAGCTG
ATTGTGGCTT TTTTGGTGCT 51 GATTAATCCG TTTAGCGCGT TGTCGCTTTA
CCTTGACCTG ACCAACGGGC 101 ACAGCACGAA GGAGCGCAGG AAGGTCGCGC
GGACGGCCGC CGTTGCCGTG 151 TTTGCCGTGA TTGCGGTATT TGCGCTGATC
GGCGGTACGC TGCTGAAGGT 201 TTTGGGCATC AGCGTCGGTT CGTTTCAGGT
CGGCGGCGGG ATTTTGGTGC 251 TGCTGATCGC CATTTCGATG ATGAACGGCA
ACGACAATCC CGCCAAGCAG 301 AATCTCGGCG CGCAGCCGGA AACGGGGCAG
GCGCGCCCCG CCCGCAATGC 351 CGGAGCGATT GCCGTCGTGC CCATCGCCAT
ACCGATCACC ATCGGCCCGG 401 GCGGTATTTC GACCGTGATT ATTTACGCTT
CGGCGGCTAA AACATACGGC 451 GACATCGCGT TGATTATCGC GGCCGGTTTG
GTGGTCAGTG CGATTTGTTA 501 TGCCATTTTA ATCGTTGCCG GGAAGGTCAG
CCGCCTGCTG GGCGCGACGG 551 GGCTGACGAT TTTAAACCGC ATTATGGGTA
TGATGCTGGC GGCGGTATCG 601 GTGGAGATTA TTGTGTCGGG ACTGAAAACG
ATATTCCCGC AACTGGCAGG 651 TTGA
This corresponds to the amino acid sequence <SEQ ID 1166; ORF
282.ng>:
TABLE-US-01455 m282.pep 1 MGLGMEIGKL IVAFLVLINP FSALSLYLDL
TNGHSTKERR KVARTAAVAV 51 FAVIAVFALI GGTLLKVLGI SVGSFQVGGG
ILVLLIAISM MNGNDNPAKQ 101 NLGAQPETGQ ARPARNAGAI AVVPIAIPIT
IGPGGISTVI IYASAAKTYG 151 DIALIIAAGL VVSAICYAIL IVAGKVSRLL
GATGLTILNR IMGMMLAAVS 201 VEIIVSGLKT IFPQLAG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 282
shows 98.6% identity over a 217 aa overlap with a predicted ORF
(ORF 282.ng) from N. gonorrhoeae:
TABLE-US-01456 m282/g282 10 20 30 40 50 60 m282.pep
MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVARTAAVAVFAVIAVFALI
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| g282
MGLGMEIGKLIVALLVLINPFSALSLYLDLTNGHSTKERRKVARTAAVAVFAVIAVFALI 10 20
30 40 50 60 70 80 90 100 110 120 m282.pep
GGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNLGAQPETGQARPARNAGAI
||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g282
GGALLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNLGAQPETGQARPARNAGAI 70 80
90 100 110 120 130 140 150 160 170 180 m282.pep
AVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGLVVSAICYAILIVAGKVSRLL
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g282
AVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIAAGLVVSAICYAILIVAGKVSRLL 130
140 150 160 170 180 190 200 210 m282.pep
GATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAGX
|||||||||||||||||||||||||||||||||||||| g282
GATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAGX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1167>:
TABLE-US-01457 a282.seq 1 ATGGGATTGG GCATGGAAAT CGGCAAGCTG
ATTGTGGCTT TTTTGGTGCT 51 GATTAATCCG TTTAGCGCGT TGTCGCTTTA
CCTTGACCTG ACCAACGGGC 101 ACAGCACGAA GGAGCGCAGG AAGGTCGCGC
GGACGGCCGC CGTTGCCGTG 151 TTTGCCGTGA TTGCGGTATT TGCGCTGATC
GGCGGTACGC TGCTGAAGGT 201 TTTGGGCATC AGCGTCGGTT CGTTTCAGGT
CGGCGGCGGA ATTTTGGTGT 251 TGCTGATTGC CATTTCGATG ATGAACGGCA
ACGACAATCC CGCCAAGCAG 301 AATCTCGGCG CGCAGCCGGA AACGGGGCAG
GTGCGCCCCG CCCGCAATGC 351 CGGAGCGATT GCCGTCGTGC CCATCGCCAT
ACCGATCACC ATCGGCCCGG 401 GCGGTATTTC GACCGTGATT ATTTACGCTT
CGGCGGCTAA AACATACGGC 451 GACATCGCGT TGATTATCGC GGCCGGTTTG
GTGGTCAGTG CGATTTGTTA 501 TGCCATTTTA ATCGTTGCCG GGAAGGTCAG
CCGCCTGCTG GGTGCGACGG 551 GGCTGACGAT TTTAAACCGT ATCATGGGTA
TGATGCTGGC GGCGGTATCG 601 GTGGAGATTA TTGTGTCGGG ACTGAAAATG
ATATTCCCGC AACTGGCAGG 651 TTGA
This corresponds to the amino acid sequence <SEQ ID 1168; ORF
282.a>:
TABLE-US-01458 a282.pep 1 MGLGMEIGKL IVAFLVLINP FSALSLYLDL
TNGHSTKERR KVARTAAVAV 51 FAVIAVFALI GGTLLKVLGI SVGSFQVGGG
ILVLLIAISM MNGNDNPAKQ 101 NLGAQPETGQ VRPARNAGAI AVVPIAIPIT
IGPGGISTVI IYASAAKTYG 151 DIALIIAAGL VVSAICYAIL IVAGKVSRLL
GATGLTILNR IMGMMLAAVS 201 VEIIVSGLKM IFPQLAG* m282/a282 99.1%
identity in 217 aa overlap 10 20 30 40 50 60 m282.pep
MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVARTAAVAVFAVIAVFALI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a282
MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVARTAAVAVFAVIAVFALI 10 20
30 40 50 60 70 80 90 100 110 120 m282.pep
GGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNLGAQPETGQARPARNAGAI
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| a282
GGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNLGAQPETGQVRPARNAGAI 70 80
90 100 110 120 130 140 150 160 170 180 m282.pep
AVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGLVVSAICYAILIVAGKVSRLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a282
AVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGLVVSAICYAILIVAGKVSRLL 130
140 150 160 170 180 190 200 210 m282.pep
GATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAGX
||||||||||||||||||||||||||||| |||||||| a282
GATGLTILNRIMGMMLAAVSVEIIVSGLKMIFPQLAGX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1169>:
TABLE-US-01459 g283.seq 1 atgaactttg ctttatccgt catcacattt
accctcgcct ctttcctgcc 51 cgtcccgcct gccggaaccg ccgtctttac
ttggaaagac ggcggcggca 101 acagctattc ggatgtgccg aaacagcttc
atcccgacca gagccaaatc 151 ctcaacctgc ggacgctcca aaccaaaccg
gcggtcaagc ccaaacctgc 201 cgtcgatacg aatgcggaca gtgcgaagga
aaacgaaaag gatatcgccg 251 agaaaaacgg gcagcttgag gaagaaaaga
aaaaaattgc cgaaaccgaa 301 cggcagaaca aagaagaaaa ctgccggatt
tcaaaaatga acctgaaggc 351 ggtgggaaac tcaaatgcga aaaacaagga
tgatttgatc cgtaaataca 401 ataacgccgt aaacaaatac tgccgttaa
This corresponds to the amino acid sequence <SEQ ID 1170; ORF
283.ng>:
TABLE-US-01460 g283.pep 1 MNFALSVITF TLASFLPVPP AGTAVFTWKD
GGGNSYSDVP KQLHPDQSQI 51 LNLRTLQTKP AVKPKPAVDT NADSAKENEK
DIAEKNGQLE EEKKKIAETE 101 RQNKEENCRI SKMNLKAVGN SNAKNKDDLI
RKYNNAVNKY CR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1171>:
TABLE-US-01461 m283.seq 1 ATGAACTTTG CTTTATCCGT CATTATGTTG
ACCCTCGCCT CTTTCCTGCC 51 CGTCCCGCCT GCCGGAGCCG CCGTCTTTAC
TTGGAAGGAC GGCGGCGGCA 101 ACAGCTATTC GGATGTACCG AAACAGCTTC
ATCCCGACCA AAGCCAAATC 151 TTAAACCTGC GGACGCGCCA AACCAAACCG
GCGGTCAAAC CCGCCCAAGC 201 CGACGCAGGG AAGCGCACAG ACGGCGCGGC
ACAGGAAAAC AATCCCGACA 251 CTGCCGAGAA AAACCGGCAG CTTGAGGAAG
AAAAGAAAAG AATTGCCGAA 301 ACCGAACGGC AGAACAAAGA AGAAAACTGC
CGGATTTCAA AAATGAACCT 351 GAAGGCGGTG GGAAATTCAA ATGCAAAAAA
CAAGGATGAT TTGATTCGGA 401 AATACAATAA CGCCGTAAAC AAATACTGCC
GTTAA
This corresponds to the amino acid sequence <SEQ ID 1172; ORF
283>:
TABLE-US-01462 m283.pep 1 MNFALSVIML TLASFLPVPP AGAAVFTWKD
GGGNSYSDVP KQLHPDQSQI 51 LNLRTRQTKP AVKPAQADAG KRTDGAAQEN
NPDTAEKNRQ LEEEKKRIAE 101 TERQNKEENC RISKMNLKAV GNSNAKNKDD
LIRKYNNAVN KYCR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01463 m283/g283 86.1% identity in 144 aa overlap 10 20 30
40 50 60 m283.pep
MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLHPDQSQILNLRTRQTKP
|||||||| :||||||||||||:|||||||||||||||||||||||||||||||| |||| g283
MNFALSVITFTLASFLPVPPAGTAVFTWKDGGGNSYSDVPKQLHPDQSQILNLRTLQTKP 10 20
30 40 50 60 70 80 90 100 110 120 m283.pep
AVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETERQNKEENCRISKMNLKAV |||| |
: :| :|:||: | |||| |||||||:||||||||||||||||||||||| g283
AVKPKPA-VDTNAD-SAKENEKDIAEKNGQLEEEKKKIAETERQNKEENCRISKMNLKAV 70 80
90 100 110 130 140 m283.pep GNSNAKNKDDLIRKYNNAVNKYCRX
||||||||||||||||||||||||| g283 GNSNAKNKDDLIRKYNNAVNKYCRX 120 130
140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1173>:
TABLE-US-01464 a283.seq 1 ATGAACTTTG CTTTATCCGT CATTATGTTG
ACCCTCGCCT CTTTCCTGCC 51 CGTCCCGCCT GCCGGAGCCG CCGTCTTTAC
TTGGAAGGAC GGCGGCGGCA 101 ACAGCTATTC GGATGTACCG AAACAGCTTC
ATCCCGACCA AAGCCAAATC 151 TTAAACCTGC GGACGCGCCA AACCAAACCG
GCGGTCAAAC CCGCCCAAGC 201 CGACGCAGGG AAGCGCACAG ACGGCGCGGC
ACAGGAAAAC AATCCCGACA 251 CTGCCGAGAA AAACCGGCAG CTTGAGGAAG
AAAAGAAAAG AATTGCCGAA 301 ACCGAACGGC AGAACAAAGA AGAAAACTGC
CGGATTTCAA AAATGAACCT 351 GAAAGCGGTG GGAAATTCAA ATGCAAAAAA
CAAGGATGAT TTGATTCGGA 401 AATACAATAA CGCCGTAAAC AAATACTGCC
GTTAA
This corresponds to the amino acid sequence <SEQ ID 1174; ORF
283.a>:
TABLE-US-01465 a283.pep 1 MNFALSVIML TLASFLPVPP AGAAVFTWKD
GGGNSYSDVP KQLHPDQSQI 51 LNLRTRQTKP AVKPAQADAG KRTDGAAQEN
NPDTAEKNRQ LEEEKKRIAE 101 TERQNKEENC RISKMNLKAV GNSNAKNKDD
LIRKYNNAVN KYCR* m283/a283 100.0% identity in 144 aa overlap 10 20
30 40 50 60 m283.pep
MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLHPDQSQILNLRTRQTKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a283
MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLHPDQSQILNLRTRQTKP 10 20
30 40 50 60 70 80 90 100 110 120 m283.pep
AVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETERQNKEENCRISKMNLKAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a283
AVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETERQNKEENCRISKMNLKAV 70 80
90 100 110 120 130 140 m283.pep GNSNAKNKDDLIRKYNNAVNKYCRX
||||||||||||||||||||||||| a283 GNSNAKNKDDLIRKYNNAVNKYCRX 130
140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1175>:
TABLE-US-01466 g284.seq. 1 atgccgtctg aaactcgaaa tcggtttcag
acggcattgg tttacgcggc 51 aggttggggc ttagcggtct ttgtaacggc
attcgctttt gcctgcaaaa 101 gagtcgccgg ctttgcgttt gcctttgaag
ccttcgccgg tttttttgaa 151 actgtctttc ttaaagcctt ctttcttgaa
accttcgccg cgcgttttgc 201 cgccgaagcc ttctttgccc ggtttatgat
cgccgcgccg gccgccggat 251 ttcctatcgc cccagccgcc tttgcctttc
ggcttgccgc ctgcggattt 301 gcgtttgcgg gccggctcca tgccttcgat
ggtcagttcg ggcagtttgc 351 ggttaatgta tttttcgatt ttgtggactt
tgacgtattc gttcacttcg 401 gcaaacgtaa tcgcaatacc cgtgcggcct
gcgcggccgg tgcgcccgat 451 gcggtggacg tagtcttccg cctgtttcgg
caggtcgtag tttatgacgt 501 gggtaatggt cggtacgtca ataccgcgtg
cggcaacgtc ggtggcaacc 551 aaaattttgc agcggccttt acgcaaatcc
gtcagcgtgc ggttgcgcca 601 gccctgcggc atatcgccgt gcaggcagtt
ggcggcgaaa cctttttcgt 651 acaattcatc cgcgatgact tcggtcatcg
ctttggtgga cgtgaaaatc 701 acacattggt cgatgttggc atcgcgcagg
atgtggtcga gcaggcggtt 751 tttgtggcgc atatcgtcgc agtacaacaa
ctgctcttcg attttgcctt 801 ggccgtccac gcgttcgact tcgataattt
cagagtcttt ggtcagtttg 851 cgcgccagtt tgccgactgc gccgtcccaa
gtggcggaga acaataa
This corresponds to the amino acid sequence <SEQ ID 1176; ORF
284.ng>:
TABLE-US-01467 g284.pep 1 MPSETRNRFQ TALVYAAGWG LAVFVTAFAF
ACKRVAGFAF AFEAFAGFFE 51 TVFLKAFFLE TFAARFAAEA FFARFMIAAP
AAGFPIAPAA FAFRLAACGF 101 AFAGRLHAFD GQFGQFAVNV FFDFVDFDVF
VHFGKRNRNT RAACAAGAPD 151 AVDVVFRLFR QVVVYDVGNG RYVNTACGNV
GGNQNFAAAF TQIRQRAVAP 201 ALRHIAVQAV GGETFFVQFI RDDFGHRFGG
RENHTLVDVG IAQDVVEQAV 251 FVAHIVAVQQ LLFDFALAVH AFDFDNFRVF
GQFARQFADC AVPSGGEQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1177>:
TABLE-US-01468 m284.seq.. 1 ATGCCGTCTG AAACTCGAAA TCGGTTTCAG
ACGGCATTGG TTTATGCGGC 51 AGGTTGGGGC TTAGCGGTCT TTGTAACGGC
GTTCGCCTTT GCCTGCAAAA 101 GAATCGCCGG CTTTGCGTTT GCCTTTGAAG
CCTTCGCCGG TTTTTTTGAA 151 ACCGTCTCTC TTAAAGCCTT CTTTCTTGAA
ACCTTCGCCG CGCGTTTTGC 201 CGCCGAAGCC TTCTTTGCTC GGTTTATGAT
CGCCGCGCCA ACCGCCGGAT 251 TTACGATCGC CCCAGCCGCC TTTGCCTTTC
GGCTTGCCGC CTGCGGATTT 301 GCGTTTGCGG GTCGGTTCCA TGCCTTCGAT
GGTCAGTTCG GGCAGTTTTC 351 GGTTAATGTA TTTTTCGATT TTGTGGACTT
TGACGTATTC GTTCACTTCG 401 GCAAACGTAA TCGCAATACC CGTGCGGCCT
GCGCGGCCGG TGCGCCCGAT 451 GCGGTGGACG TAGTCTTCCG CCTGTTTCGG
CAGGTCGTAG TTGATAACGT 501 GGGTAATGGT CGGTACGTCG ATACCGCGTG
CGGCAACATC GGTGGCAACC 551 AAAATTTTGC AGCGGCCTTT ACGCAAATCC
ATCAGCGTGC GGTTGCGCCA 601 GCCTTGCGGC ATATCGCCGT GCAGGCAGTT
TGCGGCGAAA CCTTTTTCGT 651 ACAGTTCATC CGCAATGACT TCGGTCATGG
CTTTGGTGGA CGTGAAAATC 701 ACGCATTGAT CGATATTGGC ATCGCGCAAG
ATATGATCGA GCAGGCGGTT 751 TTTGTGGCGC ATATCGTCGC AGTACAGCAG
TTGTTCTTCG ATTTTGCCTT 801 GATCGTCCAC GCGTTCGACT TCGATGATTT
CAGGGTCTTT GGTCAGTTTG 851 CGCGCCAGTT TGCCGACCGC GCCGTCCCAA
GTGGCGGAGA ACAACAAAGT 901 CTGACGGTCG CTCGGCGTTG CTTCCACGAT
GGTTTCGATG TCGTCGATAA 951 AGCCCATATC CAACATACGG TCGGCTTCGT
CCAAAATCAG CACTTCCAAA 1001 CGTTCAAAAT CAACTTTGCC GCTTTGCATC
AGGTCCATCA GACGGCCCGG 1051 CGTGGCGACA ATCAGATCGA CCGGTTTGCT
CAGGGCACGG GTTTGGTAGC 1101 CGAAAGACGC GCCGCCGACG ATGCTGACGG
TGCGGAACCA ACGCATATTT 1151 TTGGCATACG CCAGCGCGTT TTTCTCGACT
TGAGCCGCCA GTTCGCGGGT 1201 CGGGGTCAAC ACCAAAGCAC GCGGGCCTTT
GCCCGGTTTT TCGCTGCGTT 1251 TGGTCAGTTT TTGCAAAGTC GGTAA
This corresponds to the amino acid sequence <SEQ ID 1178; ORF
284>:
TABLE-US-01469 m284.pep 1 MPSETRNRFQ TALVYAAGWG LAVFVTAFAF
ACKRIAGFAF AFEAFAGFFE 51 TVSLKAFFLE TFAARFAAEA FFARFMIAAP
TAGFTIAPAA FAFRLAACGF 101 AFAGRFHAFD GQFGQFSVNV FFDFVDFDVF
VHFGKRNRNT RAACAAGAPD 151 AVDVVFRLFR QVVVDNVGNG RYVDTACGNI
GGNQNFAAAF TQIHQRAVAP 201 ALRHIAVQAV CGETFFVQFI RNDFGHGFGG
RENHALIDIG IAQDMIEQAV 251 FVAHIVAVQQ LFFDFALIVH AFDFDDFRVF
GQFARQFADR AVPSGGEQQS 301 LTVARRCFHD GFDVVDKAHI QHTVGFVQNQ
HFQTFKINFA ALHQVHQTAR 351 RGDNQIDRFA QGTGLVAERR AADDADGAEP
THIFGIRQRV FLDLSRQFAG 401 RGQHQSTRAF ARFFAAFGQF LQSR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01470 m284/g284 92.3% identity in 298 aa overlap 10 20 30
40 50 60 m284.pep
MPSETRNRFQTALVYAAGWGLAVFVTAFAFACKRIAGFAFAFEAFAGFFETVSLKAFFLE
||||||||||||||||||||||||||||||||||:||||||||||||||||| ||||||| g284
MPSETRNRFQTALVYAAGWGLAVFVTAFAFACKRVAGFAFAFEAFAGFFETVFLKAFFLE 10 20
30 40 50 60 70 80 90 100 110 120 m284.pep
TFAARFAAEAFFARFMIAAPTAGFTIAPAAFAFRLAACGFAFAGRFHAFDGQFGQFSVNV
||||||||||||||||||||:||| ||||||||||||||||||||:||||||||||:||| g284
TFAARFAAEAFFARFMIAAPAAGFPIAPAAFAFRLAACGFAFAGRLHAFDGQFGQFAVNV 70 80
90 100 110 120 130 140 150 160 170 180 m284.pep
FFDFVDFDVFVHFGKRNRNTRAACAAGAPDAVDVVFRLFRQVVVDNVGNGRYVDTACGNI
|||||||||||||||||||||||||||||||||||||||||||| :|||||||:|||||: g284
FFDFVDFDVFVHFGKRNRNTRAACAAGAPDAVDVVFRLFRQVVVYDVGNGRYVNTACGNV 130
140 150 160 170 180 190 200 210 220 230 240 m284.pep
GGNQNFAAAFTQIHQRAVAPALRHIAVQAVCGETFFVQFIRNDFGHGFGGRENHALIDIG
|||||||||||||:|||||||||||||||| ||||||||||:|||| |||||||:|:|:| g284
GGNQNFAAAFTQIRQRAVAPALRHIAVQAVGGETFFVQFIRDDFGHRFGGRENHTLVDVG 190
200 210 220 230 240 250 260 270 280 290 300 m284.pep
IAQDMIEQAVFVAHIVAVQQLFFDFALIVHAFDFDDFRVFGQFARQFADRAVPSGGEQQS
||||::|||||||||||||||:||||| |||||||:||||||||||||| |||||||| g284
IAQDVVEQAVFVAHIVAVQQLLFDFALAVHAFDFDNFRVFGQFARQFADCAVPSGGEQX 250 260
270 280 290 310 320 330 340 350 360 m284.pep
LTVARRCFHDGFDVVDKAHIQHTVGFVQNQHFQTFKINFAALHQVHQTARRGDNQIDRFA
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1179>:
TABLE-US-01471 a284.seq 1 ATGCCGTCTG AAACTCGAAA TCGGTTTCAG
ACGGCATTGG TTTATGCGGC 51 AGGTTGGGGC TTAGCGGTCT TTGTAACGGC
GTTCGCCTTT GCCTGCAAAA 101 GAATCGCCGG CTTTGCGTTT GCCTTTGAAG
CCTTCGCCGG TTTTTTTGAA 151 ACCGTCTCTC TTAAAGCCTT CTTTCTTGAA
ACCTTCGCCG CGCGTTTTGC 201 CGCCGAAGCC TTCTTTGCTC GGTTTATGAT
CGCCGCGCCA ACCGCCGGAT 251 TTACGATCGC CCCAGCCGCC TTTGCCTTTC
GGCTTGCCGC CTGCGGATTT 301 GCGTTTGCGG GTCGGTTCCA TGCCTTCGAT
GGTCAGTTCG GGCAGTTTTC 351 GGTTAATGTA TTTTTCGATT TTGTGGACTT
TGACGTATTC GTTCACTTCG 401 GCAAACGTAA TCGCAATACC CGTGCGGCCT
GCGCGGCCGG TGCGCCCGAT 451 GCGGTGGACG TAGTCTTCCG CCTGTTTCGG
CAGGTCGTAG TTGATAACGT 501 GGGTAATGGT CGGTACGTCG ATACCGCGTG
CGGCAACGTC GGTGGCAACC 551 AAAATTTTGC AGCGGCCTTT GCGCAAATCC
ATCAGCGTGC GGTTGCGCCA 601 GCCTTGCGGC ATATCGCCGT GCAGGCAGTT
GGCGGCGAAA CCTTTTTCGT 651 ACAATTCATC CGCGATGACT TCGGTCATGG
CTTTGGTGGA CGTGAAAATC 701 ACGCATTGAT CGATGTCGGC ATCGCGCAAG
ATATGATCGA GCAGGCGGTT 751 TTTGTGGCGC ATATCGTCGC AGTACAGCAG
TTGTTCTTCG ATTTTGCCTT 801 GGTCGTCCAC GCGTTCGACT TCGATGATTT
CAGGGTCTTT GGTCAGTTTG 851 CGCGCCAGTT TGCCGACCGC GCCGTCCCAA
GTGGCGGAGA ACAACAAAGT 901 CTGACGGTCT TCCGGCGTGG CTTCGACGAT
GGTTTCGATG TCGTCGATAA 951 AGCCCATATC CAACATACGG TCGGCTTCGT
CCAAAATCAG CACTTCCAAG 1001 CGGGCGAAAT CGACTTTGCC GCTTTGCATC
AAGTCCATCA GACGGCCCGG 1051 CGTGGCGACA ATCAGATCGA CCGGTTTGCT
CAGGGCGCGG GTTTGGTAGC 1101 CGAACGATGC ACCACCGACG ATGCTGACGG
TACGGAACCA ACGCATATTT 1151 TTGGCATACG CCAGCGCGTT TTTCTCGACT
TGAGCCGCCA ATTCGCGGGT 1201 CGGCGTCAAC ACCAACGCGC GCGGGCCTTT
GCCCGGTTTT TCGCTGCGTT 1251 TGGTCAGTCG CTGCAAAGTC GGTAA
This corresponds to the amino acid sequence <SEQ ID 1180; ORF
284.a>:
TABLE-US-01472 a284.pep 1 MPSETRNRFQ TALVYAAGWG LAVFVTAFAF
ACKRIAGFAF AFEAFAGFFE 51 TVSLKAFFLE TFAARFAAEA FFARFMIAAP
TAGFTIAPAA FAFRLAACGF 101 AFAGRFHAFD GQFGQFSVNV FFDFVDFDVF
VHFGKRNRNT RAACAAGAPD 151 AVDVVFRLFR QVVVDNVGNG RYVDTACGNV
GGNQNFAAAF AQIHQRAVAP 201 ALRHIAVQAV GGETFFVQFI RDDFGHGFGG
RENHALIDVG IAQDMIEQAV 251 FVAHIVAVQQ LFFDFALVVH AFDFDDFRVF
GQFARQFADR AVPSGGEQQS 301 LTVFRRGFDD GFDVVDKAHI QHTVGFVQNQ
HFQAGEIDFA ALHQVHQTAR 351 RGDNQIDRFA QGAGLVAERC TTDDADGTEP
THIFGIRQRV FLDLSRQFAG 401 RRQHQRARAF ARFFAAFGQS LQSR* m284/a284
94.8% identity in 424 aa overlap 10 20 30 40 50 60 m284.pep
MPSETRNRFQTALVYAAGWGLAVFVTAFAFACKRIAGFAFAFEAFAGFFETVSLKAFFLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a284
MPSETRNRFQTALVYAAGWGLAVFVTAFAFACKRIAGFAFAFEAFAGFFETVSLKAFFLE 10 20
30 40 50 60 70 80 90 100 110 120 m284.pep
TFAARFAAEAFFARFMIAAPTAGFTIAPAAFAFRLAACGFAFAGRFHAFDGQFGQFSVNV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a284
TFAARFAAEAFFARFMIAAPTAGFTIAPAAFAFRLAACGFAFAGRFHAFDGQFGQFSVNV 70 80
90 100 110 120 130 140 150 160 170 180 m284.pep
FFDFVDFDVFVHFGKRNRNTRAACAAGAPDAVDVVFRLFRQVVVDNVGNGRYVDTACGNI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a284
FFDFVDFDVFVHFGKRNRNTRAACAAGAPDAVDVVFRLFRQVVVDNVGNGRYVDTACGNV 130
140 150 160 170 180 190 200 210 220 230 240 m284.pep
GGNQNFAAAFTQIHQRAVAPALRHIAVQAVCGETFFVQFIRNDFGHGFGGRENHALIDIG
||||||||||:||||||||||||||||||| ||||||||||:||||||||||||||||:| a284
GGNQNFAAAFAQIHQRAVAPALRHIAVQAVGGETFFVQFIRDDFGHGFGGRENHALIDVG 190
200 210 220 230 240 250 260 270 280 290 300 m284.pep
IAQDMIEQAVFVAHIVAVQQLFFDFALIVHAFDFDDFRVFGQFARQFADRAVPSGGEQQS
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a284
IAQDMIEQAVFVAHIVAVQQLFFDFALVVHAFDFDDFRVFGQFARQFADRAVPSGGEQQS 250
260 270 280 290 300 310 320 330 340 350 360 m284.pep
LTVARRCFHDGFDVVDKAHIQHTVGFVQNQHFQTFKINFAALHQVHQTARRGDNQIDRFA ||| ||
| ||||||||||||||||||||||||: :|:|||||||||||||||||||||| a284
LTVFRRGFDDGFDVVDKAHIQHTVGFVQNQHFQAGEIDFAALHQVHQTARRGDNQIDRFA 310
320 330 340 350 360 370 380 390 400 410 420 m284.pep
QGTGLVAERRAADDADGAEPTHIFGIRQRVFLDLSRQFAGRGQHQSTRAFARFFAAFGQF
||:|||||| ::|||||:||||||||||||||||||||||| ||| :|||||||||||| a284
QGAGLVAERCTTDDADGTEPTHIFGIRQRVFLDLSRQFAGRRQHQRARAFARFFAAFGQS 370
380 390 400 410 420 m284.pep LQSRX ||||| a284 LQSRX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1181>:
TABLE-US-01473 g285.seq 1 atgaccgata ccacaccgac agataccgat
ccgaccgaaa acggcacgcg 51 caaaatgccg tctgaacacc gccccgcccc
gccggcaaaa aaacgccgcc 101 cgctgctgaa gctgtcggcg gcactgctgt
ctgtcctgat tttggcagta 151 tgtttcctcg gctggatcgc cggtacggaa
gcaggtttgc gcttcgggct 201 gtaccaaatc ccgtcctggt tcggcgtaaa
catttcctcc caaaacctca 251 aaggcacact gctcgacggc ttcgacggcg
acaactggtc gatagaaacc 301 gagggggcag accttaaaat cagccgcttc
cgcttcgcgt ggaaaccgtc 351 cgaactgatg cgccgcagcc tgcacatcac
cgacatctcc gccggcgaca 401 tcgccatcgt aaccaaaccg actccgccta
aagaagaacg cccgcctcaa 451 ggcctgcccg acagcataga cctgcccgcc
gctgtctatc tcgaccgctt 501 cgagacgggc aaaatcagca tgggcaaaac
ctttgacaaa caaaccgtct 551 atctcgaacg cctcaacgcg gcataccgtt
acgaccgtaa agggcaccgc 601 ctcgacctga aggccgccga cacgccgtgg
agcagttcgt cggggtcagc 651 ctcggtcggc ttgaaaaaac cgtttgccct
cgataccgcc atttacacca 701 aaggcggatt cgaaggcgaa accatacaca
gtacggcgcg gctgagcggc 751 agcctgaagg atgtgcgcgc cgaactgacg
atcgacggcg gcaatatccg 801 cctctcggga aaatccgtca tccacccgtt
tgccgaatca ttggataaaa 851 cattggaaga agtactggtc aaaggattca
acatcaatcc gtccgccttc 901 gtgccttccc tgcccgatgc cgggctgaat
ttcgacctga ccgccatccc 951 gtcgttttca gacggcatcg cgctggaagg
ctcgctcgat ttggaaaaca 1001 ccaaagccgg ctttgccgac cgcaacggca
tccccgtccg tcaggttttg 1051 ggcggctttg tcatccggca ggacggcacg
gtgcatatcg gcaatacgtc 1101 cgccgccctg ctcggacggg gcggcatcag
gctgtcgggc aaaatcgaca 1151 ccgaaaaaga catccttgat ttaaatatag
gcatcaactc cgtcggcgcg 1201 gaagacgtgc tgcaaaccgc gttcaaaggc
aggttggacg gcagcatcgg 1251 catcggcggc acgaccgcct cgcccaaaat
ctcttggcaa ctcggcaccg 1301 gcacggcacg cacggacggc agcctcccca
tcgcaagcga ccccgcaaac 1351 gaacagcgga aactggtgtt cgacaccgtc
aacatctccg ccggggaagg 1401 cagcctgacc gcgcaaggct atctcgagct
gtttaaagac cgcctgctca 1451 agctggacat ccgttcccgc gcattcgacc
cttcgcgcat cgatccgcaa 1501 tttccggcag gcaatatcaa cggttcgatt
catcttgccg gtgaactggc 1551 aaaagagaaa tttacgggca aaatgcgttt
tttgcccggt acgttcaacg 1601 gcgtgccgat tgccggcagc gccgacattg
tttacgagtc ccgccacctt 1651 ccgcgcgccg ccgtcgattt gcggttgggg
cggaacatcg tcaaaacaga 1701 cggcggcttc ggcaaaaaag gcgaccggct
taacctcaat atcaccgcac 1751 ccgatttatc ccgtttcggt ttcggactcg
cggggtcttt aaatgtacgc 1801 ggacaccttt ccggcgattt ggacggcggc
atccgaacct ttgaaaccga 1851 cctttccggc acggcgcgca acttacacat
cggcaaagcg gcagacatcc 1901 gttcgctcga ttttaccctc aaaggctcac
ccggcacaag ccgcccgatg 1951 cgcgccgata tcaagggcgg ccgcctttcc
ctgtcgggcg gcgcggcggt 2001 tgtcgatacc gccggcctga cgctggaagg
tacgggcgcg cagcaccgca 2051 tccgcacaca cgccgccatg acgctggacg
gcaaaccgtt caaactcgat 2101 ttggacgctt caggcggcat caacagggaa
cttacccgat ggaaaggcag 2151 catcggcatc ctcgacatcg gcggcgcatt
caacctcaag ctgcaaaacc 2201 gtatgacgct cgaagccggt gcggaacacg
tggcggcaag tgcggcaaat 2251 tggcaggcaa tgggcggcag cctcaacctg
caacactttt cttgggacag 2301 gaaaaccggc atatcggcaa aaggcggcgc
acgcggcctg cacatcgccg 2351 agttgcacaa tttcttcaaa ccgcccttcg
aacacaatct ggttttaaac 2401 ggcgactggg atgtcgccta cgggcacaac
gcgcgcggct acctcaatat 2451 cagccggcaa agcggcgatg ccgtattgcc
cggcgggcag gctttgggtt 2501 tgaacgcatt ttccctgaaa acgcgctttc
aaaacgaccg catcggaatc 2551 ctgcttgacg gcggcgcgcg tttcggacgg
attaacgccg atttgggcat 2601 cggcaacgcc ttcggcggca atatggcaaa
tacaccgctc ggcggcagga 2651 ttacagcctc ccttcccgac ttgggcgcat
tgaagccctt tctgcccgcc 2701 gccgcgcaaa acattaccgg cagcctgaat
gcctccgcgc aaatcggcgg 2751 acgggtaggc tctccgtccg tcaatgccgc
cgtcaacggt agcagcaact 2801 acgggaaaat caacggcaat atcaccgtcg
ggcaaagccg ctccttcgat 2851 accgcacctt tgggcggcag gctcaacctg
accgttgccg atgccgaagc 2901 attccgcaac ttcctaccgg tcggacaaac
cgtcaaaggc agcctgaatg 2951 ccgccgtaac cctcggcggc agcatcgccg
acccgcactt gggcggcagt 3001 atcaacggcg acaagctcta ttaccgcaac
caaacccaag gcatcatctt 3051 ggacaacggc tcgctgcgtt cgcatattgc
aggcaggaaa tgggtaatcg 3101 acagcctgaa attccggcac gaagggacgg
cggaactctc cggcacggtc 3151 agcatggaaa acagcgtgcc cgatgtcgat
atcggcgcgg tgttcgacaa 3201 ataccgcatc ctgtcccgcc ccaaccgccg
cctgacggtt tccggcaaca 3251 cccgcctgcg ctattcgccg caaaaaggca
tatccgttac cggtatgatt 3301 aaaactgatc aggggctgtt cggttcgcaa
aaatcctcga tgccgtccgt 3351 cggcgacgat gtcgtcgtat tgggcgaagt
caagaaagag gcggcggcat 3401 cgctccccgt caatatgaac ctgactttag
acctcaatga cggcatccgc 3451 ttctccggct acggcgcgga cgttaccata
ggcggcaaac tgaccctgac 3501 cgcgcaaccg ggcggaaatg tgcgtggggt
gggcacggtc cgcgtcatca 3551 aagggcgtta caaagcatac gggcaggatt
tagacattac caaaggcaca 3601 gtctcctttg tcggcccgct caacgacccc
aacctgaaca tccgcgccga 3651 acgccgcctt tcccccgtcg gtgcgggcgt
ggaaatattg ggcagcctca 3701 acagcccgcg cattacgctg acggcaaacg
aaccgatgag tgaaaaagac 3751 aagctctcct ggctcatcct caaccgtgcc
ggcagcggca gcagcggcga 3801 caatgccgcc ctgtccgcag ccgcaggcgc
gctgcttgcc gggcaaatca 3851 acgaccgcat cgggctggtg gatgatttgg
gctttaccag caagcgcagc 3901 cgcaacgcgc aaaccggcga actcaacccc
gccgaacagg tgctgaccgt 3951 cggcaaacaa ctgaccggca aactctacat
cggctacgaa tacggcatct 4001 ccagcgcgga acagtccgtc aaactgattt
accggctgac ccgcgccata 4051 caggcggttg cccgtatcgg cagccgttcg
tcgggcggcg agctgacata 4101 caccatacgt ttcgaccgcc tcttcggttc
ggacaaaaaa gactccgcag 4151 gaaacggcaa agggaaataa
This corresponds to the amino acid sequence <SEQ ID 1182; ORF
285.ng>:
TABLE-US-01474 g285.pep 1 MTDTTPTDTD PTENGTRKMP SEHRPAPPAK
KRRPLLKLSA ALLSVLILAV 51 CFLGWIAGTE AGLRFGLYQI PSWFGVNISS
QNLKGTLLDG FDGDNWSIET 101 EGADLKISRF RFAWKPSELM RRSLHITDIS
AGDIAIVTKP TPPKEERPPQ 151 GLPDSIDLPA AVYLDRFETG KISMGKTFDK
QTVYLERLNA AYRYDRKGHR 201 LDLKAADTPW SSSSGSASVG LKKPFALDTA
IYTKGGFEGE TIHSTARLSG 251 SLKDVRAELT IDGGNIRLSG KSVIHPFAES
LDKTLEEVLV KGFNINPSAF 301 VPSLPDAGLN FDLTAIPSFS DGIALEGSLD
LENTKAGFAD RNGIPVRQVL 351 GGFVIRQDGT VHIGNTSAAL LGRGGIRLSG
KIDTEKDILD LNIGINSVGA 401 EDVLQTAFKG RLDGSIGIGG TTASPKISWQ
LGTGTARTDG SLPIASDPAN 451 EQRKLVFDTV NISAGEGSLT AQGYLELFKD
RLLKLDIRSR AFDPSRIDPQ 501 FPAGNINGSI HLAGELAKEK FTGKMRFLPG
TFNGVPIAGS ADIVYESRHL 551 PRAAVDLRLG RNIVKTDGGF GKKGDRLNLN
ITAPDLSRFG FGLAGSLNVR 601 GHLSGDLDGG IRTFETDLSG TARNLHIGKA
ADIRSLDFTL KGSPGTSRPM 651 RADIKGGRLS LSGGAAVVDT AGLTLEGTGA
QHRIRTHAAM TLDGKPFKLD 701 LDASGGINRE LTRWKGSIGI LDIGGAFNLK
LQNRMTLEAG AEHVAASAAN 751 WQAMGGSLNL QHFSWDRKTG ISAKGGARGL
HIAELHNFFK PPFEHNLVLN 801 GDWDVAYGHN ARGYLNISRQ SGDAVLPGGQ
ALGLNAFSLK TRFQNDRIGI 851 LLDGGARFGR INADLGIGNA FGGNMANTPL
GGRITASLPD LGALKPFLPA 901 AAQNITGSLN ASAQIGGRVG SPSVNAAVNG
SSNYGKINGN ITVGQSRSFD 951 TAPLGGRLNL TVADAEAFRN FLPVGQTVKG
SLNAAVTLGG SIADPHLGGS 1001 INGDKLYYRN QTQGIILDNG SLRSHIAGRK
WVIDSLKFRH EGTAELSGTV 1051 SMENSVPDVD IGAVFDKYRI LSRPNRRLTV
SGNTRLRYSP QKGISVTGMI 1101 KTDQGLFGSQ KSSMPSVGDD VVVLGEVKKE
AAASLPVNMN LTLDLNDGIR 1151 FSGYGADVTI GGKLTLTAQP GGNVRGVGTV
RVIKGRYKAY GQDLDITKGT 1201 VSFVGPLNDP NLNIRAERRL SPVGAGVEIL
GSLNSPRITL TANEPMSEKD 1251 KLSWLILNRA GSGSSGDNAA LSAAAGALLA
GQINDRIGLV DDLGFTSKRS 1301 RNAQTGELNP AEQVLTVGKQ LTGKLYIGYE
YGISSAEQSV KLIYRLTRAI 1351 QAVARIGSRS SGGELTYTIR FDRLFGSDKK
DSAGNGKGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1183>:
TABLE-US-01475 m285.seq 1 ATGACCGATA CCGCACCGAC AGATACCGAT
CCGACCGAAA ACGGCACGCG 51 CAAAATGCCG TCTGAACACC GCCCTACCCC
GCCGGCAAAA AAACGCCGCC 101 CGTTGCTGAA GCTGTCGGCG GCACTGCTGT
CTGTCCTGAT TTTGGCAGTA 151 TGTTTCCTCG GCTGGCTCGC CGGTACGGAA
GCAGGTTTGC GCTTCGGGCT 201 GTACCAAATC CCGTCTTGGT TCGGCGTAAA
CATTTCCTCC CAAAACCTCA 251 AAGGCACGCT GCTCGACGGC TTCGACGGCG
ACAACTGGTC GATAGAAACC 301 GAGGGGGCAG ACCTTAAAAT CAGCCGCTTC
CGCTTCGCGT GGAAACCGTC 351 CGAACTGATG CGCCGCAGCC TGCACATTAC
CGAAATTTCC GCCGGCGACA 401 TCGCCATCGT TACCAAACCG ACTCCGCCTA
AAGAAGAACG CCCGCCGCTC 451 AGCCTTCCCG ACAGCATAGA CCTGCCTGCC
GCCGTCTATC TCGACCGCTT 501 CGAGACGGGC AAAATCAGCA TGGGCAAAGC
CTTTGACAAA CAAACCGTCT 551 ATCTCGAACG GCTGGATGCT TCATACCGTT
ACGACCGCAA AGGACACCGC 601 CTTGACCTGA AGGCCGCCGA CACGCCGTGG
AGCAGTTCGT CGGGGGCGGC 651 CTCGGTCGGC TTGAAAAAAC CGTTTGCCCT
CGATACCGCC ATTTACACCA 701 AAGGCGGACT CGAAGGCAAA ACCATACACA
GTACGGCTCG GCTGAGCGGC 751 AGCCTGAAGG ATGTGCGCGC CGAACTGGCG
ATCGACGGCG GCAATATCCG 801 CCTCTCGGGA AAATCCGTCA TCCACCCGTT
TGCCGAATCA TTGGATAAAA 851 CATTGGAAGA AGTACTGGTC AAAGGGTTCA
ACATCAATCC GGCCGCCTTC 901 GTGCCTTCCC TGCCCGATGC CGGACTGAAT
TTCGACCTGA CCGCCATCCC 951 GTCGTTTTCA GACGGCATCG CGCTGGAAGG
TTCGCTCGAT TTGGAAAACA 1001 CCAAAGCCGG CTTTGCCGAC CGCAACGGCA
TCCCCGTCCG TCAGGTTTTA 1051 GGCGGCTTTG TCATCCGGCA GGACGGCACG
GTGCATATCG GCAATACGTC 1101 CGCCGCCCTG CTCGGACGGG GCGGCATCAG
GCTGTCGGGC AAAATCGACA 1151 CCGAAAAAGA CATCCTCGAT TTAAATATAG
GCATCAACTC CGTCGGCGCG 1201 GAAGACGTAC TGCAAACCGC GTTCAAAGGC
AGGTTGGACG GCAGCATCGG 1251 CATCGGTGGC ACGACCGCCT CGCCCAAAAT
CTCTTGGCAA CTCGGCATCG 1301 GCACGGCGCG CACGGACGGC AGCCTCGCCA
TTGCAAGCGA CCCAGCAAAC 1351 GGACAGCGGA AACTGGTGCT CGACACCGTC
AACATCGCCG CCGGGCAAGG 1401 CAGCCTGACC GCGCAAGGCT ATCTCGAGCT
GTTTAAAGAC CGCCTGCTCA 1451 AGCTGGACAT CCGTTCCCGC GCATTCGACC
CTTCGCGCAT CGATCCGCAA 1501 CTTCCGGCAG GCAATATCAA CGGCTCAATA
AACCTTGCCG GCGAACTGGC 1551 AAAAGAGAAA TTCACAGGCA AAATGCGGTT
TTTACCCGGC ACGTTCAACG 1601 GCGTACCGAT TGCCGGCAGT GCCGACATTG
TTTACGAGTC CCGCCACCTT 1651 CCGCGTGCCG CCGTCGATTT GCGGCTGGGG
CGGAACATTA TTAAAACAGA 1701 CGGCGGCTTC GGCAAAAAAG GCGACCGGCT
TAACCTCAAT ATCACCGCAC 1751 CCGATTTATC CCGTTTCGGT TTCGGACTCG
CGGGGTCTTT AAATGTACGC 1801 GGACACCTTT CCGGTGATTT GGACGGCGGC
ATCCGAACCT TTGAAACCGA 1851 CCTTTCCGGC GCGGCGCGCA ACCTGCACAT
CGGCAAGGCG GCAGACATCC 1901 GTTCGCTCGA TTTCACGCTC AAAGGTTCGC
CCGACACAAG CCGCCCGATA 1951 CGCGCCGACA TCAAAGGCAG CCGCCTTTCG
CTGTCGGGCG GAGCGGCGGT 2001 TGTCGATACC GCCGACCTGA TGCTGGACGG
CACGGGCGTG CAGCACCGCA 2051 TCCGCACACA CGCCGCCATG ACGCTGGATG
GCAAACCGTT CAAATTCGAT 2101 TTGGACGCTT CAGGCGGCAT CAACAGGGAA
CTTACCCGAT GGAAAGGCAG 2151 CATCGGCATC CTCGACATCG GCGGCGCATT
CAACCTCAAG CTGCAAAACC 2201 GTATGACGCT CGAAGCCGGT GCGGAACGCG
TGGCGGCAAG TGCGGCAAAT 2251 TGGCAGGCAA TGGGCGGCAG CCTCAACCTG
CAACACTTTT CTTGGGATAA 2301 AAAAACCGGC ATATCGGCAA AAGGCGGCGC
ACACGGTCTG CATATCGCCG 2351 AGTTGCACAA TTTCTTCAAA CCGCCCTTCG
AACACAATCT GGTTTTAAAC 2401 GGCGACTGGG ATGTCGCCTA CGGGCGCAAC
GCGCGCGGCT ACCTCAATAT 2451 CAGCCGGCAA AGCGGCGATG CCGTATTGCC
CGGCGGGCAG GCTTTGGGTT 2501 TGAACGCATT TTCCCTGAAA ACGCGCTTTC
AAAACGACCG CATCGGAATC 2551 CTGCTTGACG GCGGCGCGCG TTTCGGGCGG
ATTAACGCCG ATTTGGGCAT 2601 CGCCAACGCC TTCGGCGGCA ATATGGCAAA
TGCACCGCTC GGCGGCAGGA 2651 TTACCGCCTC CCTTCCCGAC TTGGGCGCAT
TGAAGCCCTT TCTGCCCGCC 2701 GCCGCGCAAA ACATTACCGG CAGCCTGAAT
GCCGCCGCGC AAATCGGCGG 2751 ACGGGTAGGC TCTCCGTCCG TCAATGCCGC
CGTCAACGGC AGCAGCAACT 2801 ACGGGAAAAT CAACGGCAAC ATCACCGTCG
GGCAAAGCCG CTCTTTCGAT 2851 ACCGCGCCTT TGGGCGGCAG GCTCAACCTG
ACCGTTGCCG ATGCCGAAGT 2901 ATTCCGCAAC TTCCTACCGG TCGGACAAAC
CGTCAAAGGC AGCCTGAATG 2951 CCGCCGTAAC CCTCGGCGGC AGCATCGCCG
ATCCGCACTT GGGCGGCAGC 3001 ATCAACGGCG ACAAACTCTA TTACCGCAAC
CAAACCCAAG GCATCATCTT 3051 GGACAACGGC TCGCTGCGTT CGCATATCGC
GGGCAGGAAA TGGGTAATCG 3101 ACAGCCTGAA ATTCCGGCAC GAAGGGACGG
CGGAACTCTC CGGTACGGTC 3151 GGTATGGAAA ACAGCGGACC CGATGTCGAT
ATCGGCGCGG TGTTCGACAA 3201 ATACCGCATC CTGTCCCGCC CCAACCGCCG
CCTGACGGTT TCCGGCAACA 3251 CCCGCCTGCG CTATTCGCCG CAAAAAGGCA
TATCCGTTAC CGGGATGATT 3301 AAAACGGATC AGGGGCTGTT CGGTTCGCAA
AAATCCTCGA TGCCGTCCGT 3351 CGGCGACGAT GTCGTCGTAT TAGGCGAAGT
CAAAAAAGAG GCGGCGGCAC 3401 CGCTCCCCGT CAATATGAAC CTGACTTTAG
ACCTCAATGA CGGCATCCGC 3451 TTCGCCGGCT ACGGCGCGGA CGTTACCATA
GGCGGCAAAC TGACCCTGAC 3501 CGCCCAATCG GGCGGAAGCG TACGGGGCGT
GGGCACGGTC CGCGTCATCA 3551 AAGGGCGTTA TAAGGCATAC GGGCAGGATT
TGGACATTAC CAAAGGCACG 3601 GTCTCCTTTG TCGGCCCGCT CAACGATCCC
AACCTCAACA TCCGCGCCGA 3651 ACGCCGCCTT TCCCCCGTCG GTGCGGGCGT
GGAAATATTG GGCAGCCTCA 3701 ACAGCCCGCG CATTACGCTG ACGGCAAACG
AACCGATGAG TGAAAAAGAC 3751 AAGCTCTCTT GGCTCATCCT CAACCGCGCC
GGCAGCGGCA GCAGCGGCGA 3801 CAATGCCGCC CTGTCTGCAG CCGCAGGTGC
GCTGCTTGCC GGGCAAATCA 3851 ACGACCGCAT CGGGCTGGTG GATGATTTGG
GCTTTACCAG CAAGCGCAGC 3901 CGCAACGCGC AAACCGGCGA ACTCAACCCC
GCCGAACAGG TGCTGACCGT 3951 CGGCAAACAA CTGACCGGCA AACTCTACAT
CGGCTACGAA TACAGCATCT 4001 CCAGCGCGGA ACAGTCCGTC AAACTGATTT
ACCGGCTGAC CCGCGCCATA 4051 CAGGCGGTTG CCCGTATCGG CAGCCGTTCG
TCGGGCGGCG AGCTGACATA 4101 CACCATACGT TTCGACCGCT TCTCCGGTTC
GGACAAAAAA GACTCCGCCG 4151 GAAACGGCAA AGGAAAATAA
This corresponds to the amino acid sequence <SEQ ID 1184; ORF
285>:
TABLE-US-01476 m285.pep 1 MTDTAPTDTD PTENGTRKMP SEHRPTPPAK
KRRPLLKLSA ALLSVLILAV 51 CFLGWLAGTE AGLRFGLYQI PSWFGVNISS
QNLKGTLLDG FDGDNWSIET 101 EGADLKISRF RFAWKPSELM RRSLHITEIS
AGDIAIVTKP TPPKEERPPL 151 SLPDSIDLPA AVYLDRFETG KISMGKAFDK
QTVYLERLDA SYRYDRKGHR 201 LDLKAADTPW SSSSGAASVG LKKPFALDTA
IYTKGGLEGK TIHSTARLSG 251 SLKDVRAELA IDGGNIRLSG KSVIHPFAES
LDKTLEEVLV KGFNINPAAF 301 VPSLPDAGLN FDLTAIPSFS DGIALEGSLD
LENTKAGFAD RNGIPVRQVL 351 GGFVIRQDGT VHIGNTSAAL LGRGGIRLSG
KIDTEKDILD LNIGINSVGA 401 EDVLQTAFKG RLDGSIGIGG TTASPKISWQ
LGIGTARTDG SLAIASDPAN 451 GQRKLVLDTV NIAAGQGSLT AQGYLELFKD
RLLKLDIRSR AFDPSRIDPQ 501 LPAGNINGSI NLAGELAKEK FTGKMRFLPG
TFNGVPIAGS ADIVYESRHL 551 PRAAVDLRLG RNIIKTDGGF GKKGDRLNLN
ITAPDLSRFG FGLAGSLNVR 601 GHLSGDLDGG IRTFETDLSG AARNLHIGKA
ADIRSLDFTL KGSPDTSRPI 651 RADIKGSRLS LSGGAAVVDT ADLMLDGTGV
QHRIRTHAAM TLDGKPFKFD 701 LDASGGINRE LTRWKGSIGI LDIGGAFNLK
LQNRMTLEAG AERVAASAAN 751 WQAMGGSLNL QHFSWDKKTG ISAKGGAHGL
HIAELHNFFK PPFEHNLVLN 801 GDWDVAYGRN ARGYLNISRQ SGDAVLPGGQ
ALGLNAFSLK TRFQNDRIGI 851 LLDGGARFGR INADLGIANA FGGNMANAPL
GGRITASLPD LGALKPFLPA 901 AAQNITGSLN AAAQIGGRVG SPSVNAAVNG
SSNYGKINGN ITVGQSRSFD 951 TAPLGGRLNL TVADAEVFRN FLPVGQTVKG
SLNAAVTLGG SIADPHLGGS 1001 INGDKLYYRN QTQGIILDNG SLRSHIAGRK
WVIDSLKFRH EGTAELSGTV 1051 GMENSGPDVD IGAVFDKYRI LSRPNRRLTV
SGNTRLRYSP QKGISVTGMI 1101 KTDQGLFGSQ KSSMPSVGDD VVVLGEVKKE
AAAPLPVNMN LTLDLNDGIR 1151 FAGYGADVTI GGKLTLTAQS GGSVRGVGTV
RVIKGRYKAY GQDLDITKGT 1201 VSFVGPLNDP NLNIRAERRL SPVGAGVEIL
GSLNSPRITL TANEPMSEKD 1251 KLSWLILNRA GSGSSGDNAA LSAAAGALLA
GQINDRIGLV DDLGFTSKRS 1301 RNAQTGELNP AEQVLTVGKQ LTGKLYIGYE
YSISSAEQSV KLIYRLTRAI 1351 QAVARIGSRS SGGELTYTIR FDRFSGSDKK
DSAGNGKGK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01477 m285/g285 96.5% identity in 1389 aa overlap 10 20 30
40 50 60 m285.pep
MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLAGTE
||||:||||||||||||||||||||:|||||||||||||||||||||||||||||:|||| 8285
MTDTTPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLSVLILAVCFLGWIAGTE 10 20
30 40 50 60 70 80 90 100 110 120 m285.pep
AGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
AGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELM 70 80
90 100 110 120 130 140 150 160 170 180 m285.pep
RRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDK
|||||||:||||||||||||||||||||| :|||||||||||||||||||||||||:||| g285
RRSLHITDISAGDIAIVTKPTPPKEERPPQGLPDSIDLPAAVYLDRFETGKISMGKTFDK 130
140 150 160 170 180 190 200 210 220 230 240 m285.pep
QTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAASVGLKKPFALDTAIYTKGGLEGK
||||||||:|:||||||||||||||||||||||||:||||||||||||||||||||:||: g285
QTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSGSASVGLKKPFALDTAIYTKGGFEGE 190
200 210 220 230 240 250 260 270 280 290 300 m285.pep
TIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPAAF
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||:|| g285
TIHSTARLSGSLKDVRAELTIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPSAF 250
260 270 280 290 300 310 320 330 340 350 360 m285.pep
VPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGGFVIRQDGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
VPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGGFVIRQDGT 310
320 330 340 350 360 370 380 390 400 410 420 m285.pep
VHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFKGRLDGSIGIGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
VHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFKGRLDGSIGIGG 370
380 390 400 410 420 430 440 450 460 470 480 m285.pep
TTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAAGQGSLTAQGYLELFKD
|||||||||||| ||||||||| ||||||| |||||:|||||:||:|||||||||||||| g285
TTASPKISWQLGTGTARTDGSLPIASDPANEQRKLVFDTVNISAGEGSLTAQGYLELFKD 430
440 450 460 470 480 490 500 510 520 530 540 m285.pep
RLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGELAKEKFTGKMRFLPGTFNGVPIAGS
||||||||||||||||||||:|||||||||:||||||||||||||||||||||||||||| g285
RLLKLDIRSRAFDPSRIDPQFPAGNINGSIHLAGELAKEKFTGKMRFLPGTFNGVPIAGS 490
500 510 520 530 540 550 560 570 580 590 600 m285.pep
ADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVR
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| g285
ADIVYESRHLPRAAVDLRLGRNIVKTDGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVR 550
560 570 580 590 600 610 620 630 640 650 660 m285.pep
GHLSGDLDGGIRTFETDLSGAARNLHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLS
||||||||||||||||||||:||||||||||||||||||||||| ||||:||||||:||| g285
GHLSGDLDGGIRTFETDLSGTARNLHIGKAADIRSLDFTLKGSPGTSRPMRADIKGGRLS 610
620 630 640 650 660 670 680 690 700 710 720 m285.pep
LSGGAAVVDTADLMLDGTGVQHRIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGI
||||||||||| | |:|||:||||||||||||||||||:||||||||||||||||||||| g285
LSGGAAVVDTAGLTLEGTGAQHRIRTHAAMTLDGKPFKLDLDASGGINRELTRWKGSIGI 670
680 690 700 710 720 730 740 750 760 770 780 m285.pep
LDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGL
||||||||||||||||||||||: |||||||||||||||||||||||: ||||||||||: ||
g285 LDIGGAFNLKLQNRMTLEAGAEHVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGL
730 740 750 760 770 780 790 800 810 820 830 840 m285.pep
HIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLK
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g285
HIAELHNFFKPPFEHNLVLNGDWDVAYGHNARGYLNISRQSGDAVLPGGQALGLNAFSLK 790
800 810 820 830 840 850 860 870 880 890 900 m285.pep
TRFQNDRIGILLDGGARFGRINADLGIANAFGGNMANAPLGGRITASLPDLGALKPFLPA
|||||||||||||||||||||||||||:|||||||||:|||||||||||||||||||||| g285
TRFQNDRIGILLDGGARFGRINADLGIGNAFGGNMANTPLGGRITASLPDLGALKPFLPA 850
860 870 880 890 900 910 920 930 940 950 960 m285.pep
AAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNL
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| g285
AAQNITGSLNASAQIGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNL 910
920 930 940 950 960 970 980 990 1000 1010 1020 m285.pep
TVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNG
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
TVADAEAFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNG 970
980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 m285.pep
SLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTV
||||||||||||||||||||||||||||||:|||| |||||||||||||||||||||||| g285
SLRSHIAGRKWVIDSLKFRHEGTAELSGTVSMENSVPDVDIGAVFDKYRILSRPNRRLTV 1030
1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 m285.pep
SGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMN
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| g285
SGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAASLPVNMN 1090
1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 m285.pep
LTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGT
|||||||||||:||||||||||||||||| ||:||||||||||||||||||||||||||| g285
LTLDLNDGIRFSGYGADVTIGGKLTLTAQPGGNVRGVGTVRVIKGRYKAYGQDLDITKGT 1150
1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 m285.pep
VSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
VSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRA 1210
1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 m285.pep
GSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g285
GSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ 1270
1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 m285.pep
LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSDKK
|||||||||||:|||||||||||||||||||||||||||||||||||||||||: ||||| g285
LTGKLYIGYEYGISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRLFGSDKK 1330
1340 1350 1360 1370 1380 1390 m285.pep DSAGNGKGKX |||||||||| g285
DSAGNGKGKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1185>:
TABLE-US-01478 a285.seq 1 ATGACCGATA CCGCACCGAC AGATACCGAT
CCGACCGAAA ACGGCACGCG 51 CAAAATGCCG TCTGAACACC GCCCTACCCC
GCCGGCAAAA AAACGCCGCC 101 CGCTGCTGAA GCTGTCGGCG GCACTGCTGT
CTGTTCTGAT TTTGGCAGTA 151 TGTTTCCTCG GCTGGCTCGC CGGCACGGAA
GCGGGTTTGC GCTTCGGGCT 201 GTACCAAATC CCGTCTTGGT TCGGCGTAAA
CATTTCCTCC CAAAACCTCA 251 AAGGCACGCT GCTCGACGGC TTCGACGGCG
ACAACTGGTC GATAGAAACC 301 GAGGGGGCAG ACCTTAAAAT CAGCCGCTTC
CGCTTCGCGT GGAAACCGTC 351 CGAACTGATG CGCCGCAGCC TGCACATTAC
CGAAATTTCC GCCGGCGACA 401 TCGCCATCGT TACCAAACCG ACTCCGCCTA
AAGAAGAACG CCCGCCGCTC 451 AGCCTTCCCG ACAGCATAGA CCTGCCTGCC
GCCGTCTATC TCGACCGCTT 501 CGAGACGGGC AAAATCAGCA TGGGCAAAGC
CTTTGACAAA CAAACCGTCT 551 ATCTCGAACG GCTGGATGCT TCATACCGTT
ACGACCGCAA AGGACACCGC 601 CTCGACCTGA AGGCTGCCGA CACGCCGTGG
AGCAGTTCGT CGGGGTCAGC 651 CTCGGTCGGC TTGAAAAAAC CGTTTGCCCT
CGATACCGCC ATTTACACCA 701 AAGGCGGACT CGAAGGCAAA ACCATACACA
GTACGGCTCG GCTGAGCGGC 751 AGCCTGAAGG ATGTGCGCGC CGAACTGGCG
ATCGACGGCG GCAATATCCG 801 CCTCTCGGGA AAATCCGTCA TCCACCCGTT
TGCCGAATCA TTGGATAAAA 851 CATTGGAAGA AGTACTGGTC AAAGGGTTCA
ACATCAATCC GTCCGCCTTC 901 GTGCCTTCCC TGCCCGATGC CGGGCTGAAT
TTCGACCTGA CCGCCATCCC 951 GTCGTTTTCA GACGGCATCG CGCTGGAAGG
CTCGCTCGAT TTGGAAAACA 1001 CCAAAGCCGG CTTTGCCGAC CGCAACGGCA
TCCCCGTCCG TCAGGTTTTA 1051 GGCAGCTTTG TCATCCGGCA GGACGGCACG
GTGCATATCG GCAATACGTC 1101 CGTCGCCCTG CTCGGACGGG GCGGCATCAG
GCTGTCGGGC AAAATCGACA 1151 CCGAAAAAGA CATCCTCGAT TTAAATATAG
GCATCAACTC CGTCGGCGCG 1201 GAAGACGTAC TGCAAACCGC GTTCAAAGGC
AGGTTGGACG GCAGCATCGG 1251 CATCGGTGGC ACGACCGCCT CGCCCAAAAT
CTCTTGGCAA CTCGGCATCG 1301 GCACGGCGCG CACGGACGGC AGCCTCGCCA
TTGCAAGCGA CCCCGCAAAC 1351 GGACAGCGGA AACTGGTGCT CGACACCGTC
AACATCGCCG CCGGGCAAGG 1401 CAGCCTGACC GCGCAAGGCT ATCTCGAGCT
GTTTAAAGAC CGCCTGCTCA 1451 AGCTGGACAT CCGTTCCCGC GCATTCGACC
CTTCGCGCAT CGATCCGCAA 1501 CTTCCGGCAG GCAATATCAA CGGCTCAATA
AACCTTGCCG GCGAACTGGC 1551 AAAAGAGAAA TTCACAGGCA AAATGCGGTT
TTTACCCGGC ACGTTCAACG 1601 GCGTACCGAT TGCCGGCAGT GCCGACATTG
TTTACGAGTC CCGCCACCTT 1651 CCGCGTGCCG CCGTCGATTT GCGGCTGGGG
CGGAACATTA TTAAAACAGA 1701 CGGCGGCTTC GGCAAAAAAG GCGACCGGCT
TAACCTCAAT ATCACCGCAC 1751 CCGATTTATC CCGTTTCGGT TTCGGACTCG
CGGGGTCTTT AAATGTACGC 1801 GGACACCTTT CCGGCGATTT GGACGGTGGC
ATCCGAACCT TTGAAACCGA 1851 CCTTTCCGGC GCGGCGCGCA ACCTGCACAT
CGGCAAGGCG GCAGACATCC 1901 GTTCGCTCGA TTTCACGCTC AAAGGTTCGC
CCGACACAAG CCGCCCGATA 1951 CGCGCCGACA TCAAAGGCAG CCGCCTTTCG
CTGTCGGGCG GAGCGGAGGT 2001 TGTCGATACC GCCGACCTGA TGCTGGACGG
CACGGGCGTG CAGCACCGCA 2051 TCCGCACACA CGCCGCCATG ACGCTGGATG
GCAAACCGTT CAAATTCGAT 2101 TTGGACGCTT CAGGCGGCAT CAACAGGGAA
CTTACCCGAT GGAAAGGCAG 2151 CATCGGCATC CTCGACATCG GCGGCGCATT
CAACCTCAAG CTGCAAAACC 2201 GTATGACGCT CGAAGCCGGT GCGGAACGCG
TGGCGGCAAG TGCGGCAAAT 2251 TGGCAGGCAA TGGGCGGCAG CCTCAACCTG
CAACACTTTT CTTGGGATAA 2301 AAAAACCGGC ATATCGGCAA AAGGCGGCGC
ACACGGTCTG CATATCGCCG 2351 AGTTGCACAA TTTCTTCAAA CCGCCCTTCG
AACACAATCT GGTTTTAAAC 2401 GGCGACTGGG ATGTCGCCTA CGGGCGAAAC
GCGCGCGGCT ACCTCAATAT 2451 CAGCCGGCAA AGCGGCGATG CCGTATTGCC
CGGCGGGCAG GCTTTGGGTT 2501 TGAACGCATT TTCCCTGAAA ACGCGCTTTC
AAAACGACCG TATCGGAATC 2551 CTGCTTGACG GCGGCGCGCG TTTCGGGCGG
ATTAACGCCG ATTTGGACAT 2601 CGGCAACGCC TTCGGCGGCA ATATGGCAAA
TGCACCGCTC GGCGGCAGGA 2651 TTACCGCCTC CCTTCCCGAC TTGGGCACAT
TGAAGCCCTT TCTGCCCGCC 2701 GCCGCGCAAA ACATTACCGG CAGCCTGAAT
GCCGCCGCGC AAATCGGCGG 2751 ACGGGTCGGC TCTCCGTCCG TCAATGCCGC
CGTCAACGGC AGCAGCAACT 2801 ACGGGAAAAT CAACGGCAAC ATCACCGTCG
GGCAAAGCCG CTCTTTCGAT 2851 ACCGCGCCTT TGGGCGGCAG GCTCAACCTG
ACCGTTGCCG ATGCCGAAGT 2901 ATTCCGCAAC TTCCTACCGG TCGGACAAAC
CGTCAAAGGC AGCCTGAATG 2951 CCGCCGTAAC CCTCGGCGGC AGCATCGCCG
ATCCGCACTT GGGCGGCAGC 3001 ATCAACGGCG ACAAACTCTA TTACCGCAAC
CAAACCCAAG GCATCATCTT 3051 GGACAACGGC TCGCTGCGTT CGCATATCGC
GGGCAGGAAA TGGGTAATCG 3101 ACAGCCTGAA ATTCCGGCAC GAAGGGACGG
CGGAACTCTC CGGTACGGTC 3151 GGTATGGAAA ACAGCGGACC CGATGTCGAT
ATCGGCGCGG TGTTCGACAA 3201 ATACCGCATC CTGTCCCGCC CCAACCGCCG
CCTGACGGTT TCCGGCAACA 3251 CCCGCCTGCG CTATTCGCCG CAAAAAGGCA
TATCCGTTAC CGGGATGATT 3301 AAAACGGATC AGGGGCTGTT CGGTTCGCAA
AAATCCTCGA TGCCGTCCGT 3351 CGGCGACGAT GTCGTCGTAT TAGGCGAAGT
CAAAAAAGAG GCGGCGGCAC 3401 CGCTCCCCGT CAATATGAAC CTGACTTTAG
ACCTCAATGA CGGCATCCGC 3451 TTCGCCGGCT ACGGCGCGGA CGTTACCATA
GGCGGCAAAC TGACCCTGAC 3501 CGCCCAATCG GGCGGAAGCG TGCGGGGCGT
GGGCACGGTC CGCGTCATCA 3551 AAGGGCGTTA TAAGGCATAC GGGCAGGATT
TGGACATTAC CAAAGGCACG 3601 GTCTCCTTTG TCGGCCCGCT CAACGACCCC
AACCTCAACA TCCGCGCCGA 3651 ACGCCGCCTT TCCCCCGTCG GTGCGGGCGT
GGAAATATTG GGCAGCCTCA 3701 ACAGTCCGCG CATTACGCTG ACGGCAAACG
AACCGATGAG TGAAAAAGAC 3751 AAGCTCTCCT GGCTCATCCT CAACCGCGCC
GGCAGTGGCA GCAGCGGCGA 3801 CAATGCCGCC CTGTCCGCAG CCGCCGGCGC
GCTGCTTGCC GGGCAAATCA 3851 ACGACCGCAT CGGGCTGGTG GATGATTTGG
GCTTTACCAG CAAGCGCAGC 3901 CGCAACGCGC AAACCGGCGA ACTCAACCCC
GCCGAACAGG TGCTGACCGT 3951 CGGCAAACAA CTGACCGGCA AACTCTACAT
CGGCTACGAA TACAGCATCT 4001 CCAGCGCGGA ACAGTCCGTC AAACTGATTT
ACCGGCTGAC CCGCGCCATA 4051 CAGGCGGTTG CCCGTATCGG CAGCCGTTCG
TCGGGCGGCG AGCTGACATA 4101 CACCATACGT TTCGACCGCT TCTCCGGTTC
GGACAAAAAA GACTCCGCCG 4151 GAAACAGCAA AGGAAAATAA
This corresponds to the amino acid sequence <SEQ ID 1186; ORF
285.a>:
TABLE-US-01479 a285.pep 1 MTDTAPTDTD PTENGTRKMP SEHRPTPPAK
KRRPLLKLSA ALLSVLILAV 51 CFLGWLAGTE AGLRFGLYQI PSWFGVNISS
QNLKGTLLDG FDGDNWSIET 101 EGADLKISRF RFAWKPSELM RRSLHITEIS
AGDIAIVTKP TPPKEERPPL 151 SLPDSIDLPA AVYLDRFETG KISMGKAFDK
QTVYLERLDA SYRYDRKGHR 201 LDLKAADTPW SSSSGSASVG LKKPFALDTA
IYTKGGLEGK TIHSTARLSG 251 SLKDVRAELA IDGGNIRLSG KSVIHPFAES
LDKTLEEVLV KGFNINPSAF 301 VPSLPDAGLN FDLTAIPSFS DGIALEGSLD
LENTKAGFAD RNGIPVRQVL 351 GSFVIRQDGT VHIGNTSVAL LGRGGIRLSG
KIDTEKDILD LNIGINSVGA 401 EDVLQTAFKG RLDGSIGIGG TTASPKISWQ
LGIGTARTDG SLAIASDPAN 451 GQRKLVLDTV NIAAGQGSLT AQGYLELFKD
RLLKLDIRSR AFDPSRIDPQ 501 LPAGNINGSI NLAGELAKEK FTGKMRFLPG
TFNGVPIAGS ADIVYESRHL 551 PRAAVDLRLG RNIIKTDGGF GKKGDRLNLN
ITAPDLSRFG FGLAGSLNVR 601 GHLSGDLDGG IRTFETDLSG AARNLHIGKA
ADIRSLDFTL KGSPDTSRPI 651 RADIKGSRLS LSGGAEVVDT ADLMLDGTGV
QHRIRTHAAM TLDGKPFKFD 701 LDASGGINRE LTRWKGSIGI LDIGGAFNLK
LQNRMTLEAG AERVAASAAN 751 WQAMGGSLNL QHFSWDKKTG ISAKGGAHGL
HIAELHNFFK PPFEHNLVLN 801 GDWDVAYGRN ARGYLNISRQ SGDAVLPGGQ
ALGLNAFSLK TRFQNDRIGI 851 LLDGGARFGR INADLDIGNA FGGNMANAPL
GGRITASLPD LGTLKPFLPA 901 AAQNITGSLN AAAQIGGRVG SPSVNAAVNG
SSNYGKINGN ITVGQSRSFD 951 TAPLGGRLNL TVADAEVFRN FLPVGQTVKG
SLNAAVTLGG SIADPHLGGS 1001 INGDKLYYRN QTQGIILDNG SLRSHIAGRK
WVIDSLKFRH EGTAELSGTV 1051 GMENSGPDVD IGAVFDKYRI LSRPNRRLTV
SGNTRLRYSP QKGISVTGMI 1101 KTDQGLFGSQ KSSMPSVGDD VVVLGEVKKE
AAAPLPVNMN LTLDLNDGIR 1151 FAGYGADVTI GGKLTLTAQS GGSVRGVGTV
RVIKGRYKAY GQDLDITKGT 1201 VSFVGPLNDP NLNIRAERRL SPVGAGVEIL
GSLNSPRITL TANEPMSEKD 1251 KLSWLILNRA GSGSSGDNAA LSAAAGALLA
GQINDRIGLV DDLGFTSKRS 1301 RNAQTGELNP AEQVLTVGKQ LTGKLYIGYE
YSISSAEQSV KLIYRLTRAI 1351 QAVARIGSRS SGGELTYTIR FDRFSGSDKK
DSAGNSKGK* m285/a285 99.4% identity in 1389 aa overlap 10 20 30 40
50 60 m285.pep
MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLAGTE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLAGTE 10 20
30 40 50 60 70 80 90 100 110 120 m285.pep
AGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
AGLRFGLYQI PSWFGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELM 70 80
90 100 110 120 130 140 150 160 170 180 m285.pep
RRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
RRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDK 130
140 150 160 170 180 190 200 210 220 230 240 m285.pep
QTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAASVGLKKPFALDTAIYTKGGLEGK
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a285
QTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSASVGLKKPFALDTAIYTKGGLEGK 190
200 210 220 230 240 250 260 270 280 290 300 m285.pep
TIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPAAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a285
TIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPSAF 250
260 270 280 290 300 310 320 330 340 350 360 m285.pep
VPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGGFVIRQDGT
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| a285
VPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGSFVIRQDGT 310
320 330 340 350 360 370 380 390 400 410 420 m285.pep
VHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFKGRLDGSIGIGG
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| a285
VHIGNTSVALLGRGGIRLSGKIDTEKDILDLNIGINSVGAEDVLQTAFKGRLDGSIGIGG 370
380 390 400 410 420 430 440 450 460 470 480 m285.pep
TTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAAGQGSLTAQGYLELFKD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
TTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAAGQGSLTAQGYLELFKD 430
440 450 460 470 480 490 500 510 520 530 540 m285.pep
RLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGELAKEKFTGKMRFLPGTFNGVPIAGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
RLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGELAKEKFTGKMRFLPGTFNGVPIAGS 490
500 510 520 530 540 550 560 570 580 590 600 m285.pep
ADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
ADIVYESRHLPRAAVDLRLGRNIIKIDGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVR 550
560 570 580 590 600 610 620 630 640 650 660 m285.pep
GHLSGDLDGGIRTFETDLSGAARNLHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
GHLSGDLDGGIRTFETDLSGAARNLHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLS 610
620 630 640 650 660 670 680 690 700 710 720 m285.pep
LSGGAAVVDTADLMLDGTGVQHRIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGI |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
LSGGAEVVDTADLMLDGTGVQHRIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGI 670
680 690 700 710 720 730 740 750 760 770 780 m285.pep
LDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
LDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGL 730
740 750 760 770 780 790 800 810 820 830 840 m285.pep
HIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
HIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLK 790
800 810 820 830 840 850 860 870 880 890 900 m285.pep
TRFQNDRIGILLDGGARFGRINADLGIANAFGGNMANAPLGGRITASLPDLGALKPFLPA
||||||||||||||||||||||||| |:||||||||||||||||||||||||:||||||| a285
TRFQNDRIGILLDGGARFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPA 850
860 870 880 890 900 910 920 930 940 950 960 m285.pep
AAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
AAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNL 910
920 930 940 950 960 970 980 990 1000 1010 1020 m285.pep
TVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
TVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNG 970
980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 m285.pep
SLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
SLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTV 1030
1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 m285.pep
SGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
SGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMN 1090
1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 m285.pep
LTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
LTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGT 1150
1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 m285.pep
VSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
VSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRA 1210
1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 m285.pep
GSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
GSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ 1270
1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 m285.pep
LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSDKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a285
LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSDKK 1330
1340 1350 1360 1370 1380 1390 m285.pep DSAGNGKGKX |||||:|||| a285
DSAGNSKGKX 1390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1187>:
TABLE-US-01480 g285-1.seq 1 CTGAAGCTGT CGGCGGCACT GCTGTCTGTC
CTGATTTTGG CAGTATGTTT 51 CCTCGGCTGG ATCGCCGGTA CGGAAGCAGG
TTTGCGCTTC GGGCTGTACC 101 AAATCCCGTC CTGGTTCGGC GTAAACATTT
CCTCCCAAAA CCTCAAAGGC 151 ACACTGCTCG ACGGCTTCGA CGGCGACAAC
TGGTCGATAG AAACCGAGGG 201 GGCAGACCTT AAAATCAGCC GCTTCCGCTT
CGCGTGGAAA CCGTCCGAAC 251 TGATGCGCCG CAGCCTGCAC ATCACCGACA
TCTCCGCCGG CGACATCGCC 301 ATCGTAACCA AACCGACTCC GCCTAAAGAA
GAACGCCCGC CTCAAGGCCT 351 GCCCGACAGC ATAGACCTGC CCGCCGCCGT
CTATCTCGAC CGCTTCGAGA 401 CGGGCAAAAT CAGCATGGGC AAAACCTTTG
ACAAACAAAC CGTCTATCTC 451 GAACGCCTCA ACGCGGCATA CCGTTACGAC
CGTAAAGGGC ACCGCCTCGA 501 CCTGAAGGCC GCCGACACGC CGTGGAGCAG
TTCGTCGGGG TCAGCCTCGG 551 TCGGCTTGAA AAAACCGTTT GCCCTCGATA
CCGCCATTTA CACCAAAGGC 601 GGATTCGAAG GCGAAACCAT ACACAGTACG
GCGCGGCTGA GCGGCAGCCT 651 GAAGGATGTG CGCGCCGAAC TGACGATCGA
CGGCGGCAAT ATCCGCCTCT 701 CGGGAAAATC CGTCATCCAC CCGTTTGCCG
AATCATTGGA TAAAACATTG 751 GAAGAAGTAC TGGTCAAAGG ATTCAACATC
AATCCGTCCG CCTTCGTGCC 801 TTCCCTGCCC GATGCCGGGC TGAATTTCGA
CCTGACCGCC ATCCCGTCGT 851 TTTCAGACGG CATCGCGCTG GAAGGCTCGC
TCGATTTGGA AAACACCAAA 901 GCCGGCTTTG CCGACCGCAA CGGCATCCCC
GTCCGTCAGG TTTTGGGCGG 951 CTTTGTCATC CGGCAGGACG GCACGGTGCA
TATCGGCAAT ACGTCCGCCG 1001 CCCTGCTCGG ACGGGGCGGC ATCAGGCTGT
CGGGCAAAAT CGACACCGAA 1051 AAAGACATCC TTGATTTAAA TATAGGCATC
AACTCCGTCG GCGCGGAAGA 1101 CGTGCTGCAA ACCGCGTTCA AAGGCAGGTT
GGACGGCAGC ATCGGCATCG 1151 GCGGCACGAC CGCCTCGCCC AAAATCTCTT
GGCAACTCGG CACCGGCACG 1201 GCACGCACGG ACGGCAGCCt cgcCATCGCA
AGCGAcCCCG CAAACGAACA 1251 GCGGAAACTG GTGTTCGACA CCGTCAACAT
CTCCGCCGGG GAAGGCAGCC 1301 TGACCGCGCA AGGCTATCTC GAGCTGTTTA
AAGACCGCCT GCTCAAGCTG 1351 GACATCCGTT CCCGCGCATT CGACCCTTCG
CGCATCGATC CGCAATTTCC 1401 GGCAGGCgat atCAACGGTT CGATTCATCT
TGCCGGTGAA CTGGCAAAAG 1451 AGAAATTTAC GGGCAAAATG CGTTTTTTGC
CCGGTACGTT CAACGGCGTG 1501 CCGATTGCCG GCAGCGCCGA CATTGTTTAC
GAGTCCCGCC ACCTTCCGCG 1551 CGCCGCCGTC GATTTGCGGT TGGGGCGGAA
CATCGTCAAA ACAGACGGCG 1601 GCTTCGGCAA AAAAGGCGAC CGGCTTAACC
TCAATATCAC CGCACCCGAT 1651 TTATCCCGTT TCGGTTTCGG ACTCGCGGGG
TCTTTAAATG TACGCGGACA 1701 CCTTTCCGGC GATTTGGACG GCGGCATCCG
AACCTTTGAA ACCGACCTTT 1751 CCGGCACGGC GCGCAACTTA CACATCGGCA
AAGCGGCAGA CATCCGTTCG 1801 CTCGATTTTA CCCTCAAAGG CTCACCCGGC
ACAAGCCGCC CGATGCGCGC 1851 CGATATCAAG GGCGGCCGCC TTTCCCTGTC
GGGCGGCGCG GCGGTTGTCG 1901 ATACCGCCGG CCTGACGCTG GAAGGTACGG
GCGCGCAGCA CCGCATCCGC 1951 ACACACGCCG CCATGACGCT GGACGGCAAA
CCGTTCAAAC TCGATTTGGA 2001 CGCTTCAGGC GGCATCAACA GGGAACTTAC
CCGATGGAAA GGCAGCATCG 2051 GCATCCTCGA CATCGGCGGC GCATTCAACC
TCAAGCTGCA AAACCGTATG 2101 ACGCTCGAAG CCGGTGCGGA ACACGTGGCG
GCAAGTGCGG CAAATTGGCA 2151 GGCAATGGGC GGCAGCCTCA ACCTGCAACA
CTTTTCTTGG GACAGGAAAA 2201 CCGGCATATC GGCAAAAGGC GGCGCACGCG
GCCTGCACAT CGCCGAGTTG 2251 CACAATTTCT TCAAACCGCC CTTCGAACAC
AATCTGGTTT TAAACGGCGA 2301 CTGGGATGTC GCCTACGGGC ACAACGCGCG
CGGCTACCTC AATATCAGCC 2351 GGCAAAGCGG CGATGCCGTA TTGCCCGGCG
GGCAGGCTTT GGGTTTGAAC 2401 GCATTTTCCC TGAAAACGCG CTTTCAAAAC
GACCGCATCG GAATCCTGCT 2451 TGACGGCGGC GCGCGTTTCG GACGGATTAA
CGCCGATTTG GGCATCGGCA 2501 ACGCCTTCGG CGGCAATATG GCAAATACAC
CGCTCGGCGG CAGGATTACA 2551 GCCTCCCTTC CCGACTTGGG CGCATTGAAG
CCCTTTCTGC CCGCCGCCGC 2601 GCAAAACATT ACCGGCAGCC TGAATGCCTC
CGCGCAAATC GGCGGACGGG 2651 TAGGCTCTCC GTCCGTCAAT GCCGCCGTCA
ACGGTAGCAG CAACTACGGG 2701 AAAATCAACG GCAATATCAC CGTCGGGCAA
AGCCGCTCCT TCGATACCGC 2751 ACCTTTGGGC GGCAGGCTCA ACCTGACCGT
TGCCGATGCC GAAGCATTCC 2801 GCAACTTCCT ACCGGTCGGA CAAACCGTCA
AAGGCAGCCT GAATGCCGCC 2851 GTAACCCTCG GCGGCAGCAT CGCCGACCCG
CACTTGGGCG GCAGTATCAA 2901 CGGCGACAAG CTCTATTACC GCAACCAAAC
CCAAGGCATC ATCTTGGACA 2951 ACGGCTCGCT GCGTTCGCAT ATTGCAGGCA
GGAAATGGGT AATCGACAGC 3001 CTGAAATTCC GGCACGAAGG GACGGCGGAA
CTCTCCGGCA CGGTCAGCAT 3051 GGAAAACAGC GTGCCCGATG TCGATATCGG
CGCGGTGTTC GACAAATACC 3101 GCATCCTGTC CCGCCCCAAC CGCCGCCTGA
CGGTTTCCGG CAACACCCGC 3151 CTGCGCTATT CGCCGCAAAA AGGCATATCC
GTTACCGGTA TGATTAAAAC 3201 TGATCAGGGG CTGTTCGGTT CGCAAAAATC
CTCGATGCCG TCCGTCGGCG 3251 ACGATGTCGT CGTATTGGGC GAAGTCAAGA
AAGAGGCGGC GGCATCGCTC 3301 CCCGTCAATA TGAACCTGAC TTTAGACCTC
AATGACGGCA TCCGCTTCTC 3351 CGGCTACGGC GCGGACGTTA CCATAGGCGG
CAAACTGACC CTGACCGCGC 3401 AACCGGGCGG AAATGTGCGT GGGGTGGGCA
CGGTCCGCGT CATCAAAGGG 3451 CGTTACAAAG CATACGGGCA GGATTTAGAC
ATTACCAAAG GCACAGTCTC 3501 CTTTGTCGGC CCGCTCAACG ACCCCAACCT
GAACATCCGC GCCGAACGCC 3551 GCCTTTCCCC CGTCGGTGCG GGCGTGGAAA
TATTGGGCAG CCTCAACAGC 3601 CCGCGCATTA CGCTGACGGC AAACGAACCG
ATGAGTGAAA AAGACAAGCT 3651 CTCCTGGCTC ATCCTCAACC GTGCCGGCAG
CGGCAGCAGC GGCGACAATG 3701 CCGCCCTGTC CGCAGCCGCA GGCGCGCTGC
TTGCCGGGCA AATCAACGAC 3751 CGCATCGGGC TGGTGGATGA TTTGGGCTTT
ACCAGCAAGC GCAGCCGCAA 3801 CGCGCAAACC GGCGAACTCA ACCCCGCCGA
ACAGGTGCTG ACCGTCGGCA 3851 AACAACTGAC CGGCAAACTC TACATCGGCT
ACGAATACGG CATCTCCAGC 3901 GCGGAACAGT CCGTCAAACT GATTTACCGG
CTGACCCGCG CCATACAGGC 3951 GGTTGCCCGT ATCGGCAGCC GTTCGTCGGG
CGGCGAGCTG ACATACACCA 4001 TACGTTTCGA CCGCCTCTTC GGTTCGGACA
AAAAAGACTC CGCAGGAAAC 4051 GGCAAAGGGA AATAA
This corresponds to the amino acid sequence <SEQ ID 1188; ORF
285-1.ng>:
TABLE-US-01481 g285-1.pep 1 LKLSAALLSV LILAVCFLGW IAGTEAGLRF
GLYQIPSWFG VNISSQNLKG 51 TLLDGFDGDN WSIETEGADL KISRFRFAWK
PSELMRRSLH ITDISAGDIA 101 IVTKPTPPKE ERPPQGLPDS IDLPAAVYLD
RFETGKISMG KTFDKQTVYL 151 ERLNAAYRYD RKGHRLDLKA ADTPWSSSSG
SASVGLKKPF ALDTAIYTKG 201 GFEGETIHST ARLSGSLKDV RAELTIDGGN
IRLSGKSVIH PFAESLDKTL 251 EEVLVKGFNI NPSAFVPSLP DAGLNFDLTA
IPSFSDGIAL EGSLDLENTK 301 AGFADRNGIP VRQVLGGFVI RQDGTVHIGN
TSAALLGRGG IRLSGKIDTE 351 KDILDLNIGI NSVGAEDVLQ TAFKGRLDGS
IGIGGTTASP KISWQLGTGT 401 ARTDGSLAIA SDPANEQRKL VFDTVNISAG
EGSLTAQGYL ELFKDRLLKL 451 DIRSRAFDPS RIDPQFPAGD INGSIHLAGE
LAKEKFTGKM RFLPGTFNGV 501 PIAGSADIVY ESRHLPRAAV DLRLGRNIVK
TDGGFGKKGD RLNLNITAPD 551 LSRFGFGLAG SLNVRGHLSG DLDGGIRTFE
TDLSGTARNL HIGKAADIRS 601 LDFTLKGSPG TSRPMRADIK GGRLSLSGGA
AVVDTAGLTL EGTGAQHRIR 651 THAAMTLDGK PFKLDLDASG GINRELTRWK
GSIGILDIGG AFNLKLQNRM 701 TLEAGAEHVA ASAANWQAMG GSLNLQHFSW
DRKTGISAKG GARGLHIAEL 751 HNFFKPPFEH NLVLNGDWDV AYGHNARGYL
NISRQSGDAV LPGGQALGLN 801 AFSLKTRFQN DRIGILLDGG ARFGRINADL
GIGNAFGGNM ANTPLGGRIT 851 ASLPDLGALK PFLPAAAQNI TGSLNASAQI
GGRVGSPSVN AAVNGSSNYG 901 KINGNITVGQ SRSFDTAPLG GRLNLTVADA
EAFRNFLPVG QTVKGSLNAA 951 VTLGGSIADP HLGGSINGDK LYYRNQTQGI
ILDNGSLRSH IAGRKWVIDS 1001 LKFRHEGTAE LSGTVSMENS VPDVDIGAVF
DKYRILSRPN RRLTVSGNTR 1051 LRYSPQKGIS VTGMIKTDQG LFGSQKSSMP
SVGDDVVVLG EVKKEAAASL 1101 PVNMNLTLDL NDGIRFSGYG ADVTIGGKLT
LTAQPGGNVR GVGTVRVIKG 1151 RYKAYGQDLD ITKGTVSFVG PLNDPNLNIR
AERRLSPVGA GVEILGSLNS 1201 PRITLTANEP MSEKDKLSWL ILNRAGSGSS
GDNAALSAAA GALLAGQIND 1251 RIGLVDDLGF TSKRSRNAQT GELNPAEQVL
TVGKQLTGKL YIGYEYGISS 1301 AEQSVKLIYR LTRAIQAVAR IGSRSSGGEL
TYTIRFDRLF GSDKKDSAGN 1351 GKGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1189>:
TABLE-US-01482 m285-1.seq 1 CTGAAGCTGT CGGCGGCACT GCTGTCTGTC
CTGATTTTGG CAGTATGTTT 51 CCTCGGCTGG CTCGCCGGTA CGGAAGCAGG
TTTGCGCTTC GGGCTGTACC 101 AAATCCCGTC TTGGTTCGGC GTAAACATTT
CCTCCCAAAA CCTCAAAGGC 151 ACGCTGCTCG ACGGCTTCGA CGGCGACAAC
TGGTCGATAG AAACCGAGGG 201 GGCAGACCTT AAAATCAGCC GCTTCCGCTT
CGCGTGGAAA CCGTCCGAAC 251 TGATGCGCCG CAGCCTGCAC ATTACCGAAA
TTTCCGCCGG CGACATCGCC 301 ATCGTTACCA AACCGACTCC GCCTAAAGAA
GAACGCCCGC CGCTCAGCCT 351 TCCCGACAGC ATAGACCTGC CTGCCGCCGT
CTATCTCGAC CGCTTCGAGA 401 CGGGCAAAAT CAGCATGGGC AAAGCCTTTG
ACAAACAAAC CGTCTATCTC 451 GAACGGCTGG ATGCTTCATA CCGTTACGAC
CGCAAAGGAC ACCGCCTTGA 501 CCTGAAGGCC GCCGACACGC CGTGGAGCAG
TTCGTCGGGG GCGGCCTCGG 551 TCGGCTTGAA AAAACCGTTT GCCCTCGATA
CCGCCATTTA CACCAAAGGC 601 GGACTCGAAG GCAAAACCAT ACACAGTACG
GCTCGGCTGA GCGGCAGCCT 651 GAAGGATGTG CGCGCCGAAC TGGCGATCGA
CGGCGGCAAT ATCCGCCTCT 701 CGGGAAAATC CGTCATCCAC CCGTTTGCCG
AATCATTGGA TAAAACATTG 751 GAAGAAGTAC TGGTCAAAGG GTTCAACATC
AATCCGGCCG CCTTCGTGCC 801 TTCCCTGCCC GATGCCGGAC TGAATTTCGA
CCTGACCGCC ATCCCGTCGT 851 TTTCAGACGG CATCGCGCTG GAAGGTTCGC
TCGATTTGGA AAACACCAAA 901 GCCGGCTTTG CCGACCGCAA CGGCATCCCC
GTCCGTCAGG TTTTAGGCGG 951 CTTTGTCATC CGGCAGGACG GCACGGTGCA
TATCGGCAAT ACGTCCGCCG 1001 CCCTGCTCGG ACGGGGCGGC ATCAGGCTGT
CGGGCAAAAT CGACACCGAA 1051 AAAGACATCC TCGATTTAAA TATAGGCATC
AACTCCGTCG GCGCGGAAGA 1101 CGTACTGCAA ACCGCGTTCA AAGGCAGGTT
GGACGGCAGC ATCGGCATCG 1151 GTGGCACGAC CGCCTCGCCC AAAATCTCTT
GGCAACTCGG CATCGGCACG 1201 GCGCGCACGG ACGGCAGCCT CGCCATTGCA
AGCGACCCAG CAAACGGACA 1251 GCGGAAACTG GTGCTCGACA CCGTCAACAT
CGCCGCCGGG CAAGGCAGCC 1301 TGACCGCGCA AGGCTATCTC GAGCTGTTTA
AAGACCGCCT GCTCAAGCTG 1351 GACATCCGTT CCCGCGCATT CGACCCTTCG
CGCATCGATC CGCAACTTCC 1401 GGCAGGCAAT ATCAACGGCT CAATAAACCT
TGCCGGCGAA CTGGCAAAAG 1451 AGAAATTCAC AGGCAAAATG CGGTTTTTAC
CCGGCACGTT CAACGGCGTA 1501 CCGATTGCCG GCAGTGCCGA CATTGTTTAC
GAGTCCCGCC ACCTTCCGCG 1551 TGCCGCCGTC GATTTGCGGC TGGGGCGGAA
CATTATTAAA ACAGACGGCG 1601 GCTTCGGCAA AAAAGGCGAC CGGCTTAACC
TCAATATCAC CGCACCCGAT 1651 TTATCCCGTT TCGGTTTCGG ACTCGCGGGG
TCTTTAAATG TACGCGGACA 1701 CCTTTCCGGT GATTTGGACG GCGGCATCCG
AACCTTTGAA ACCGACCTTT 1751 CCGGCGCGGC GCGCAACCTG CACATCGGCA
AGGCGGCAGA CATCCGTTCG 1801 CTCGATTTCA CGCTCAAAGG TTCGCCCGAC
ACAAGCCGCC CGATACGCGC 1851 CGACATCAAA GGCAGCCGCC TTTCGCTGTC
GGGCGGAGCG GCGGTTGTCG 1901 ATACCGCCGA CCTGATGCTG GACGGCACGG
GCGTGCAGCA CCGCATCCGC 1951 ACACACGCCG CCATGACGCT GGATGGCAAA
CCGTTCAAAT TCGATTTGGA 2001 CGCTTCAGGC GGCATCAACA GGGAACTTAC
CCGATGGAAA GGCAGCATCG 2051 GCATCCTCGA CATCGGCGGC GCATTCAACC
TCAAGCTGCA AAACCGTATG 2101 ACGCTCGAAG CCGGTGCGGA ACGCGTGGCG
GCAAGTGCGG CAAATTGGCA 2151 GGCAATGGGC GGCAGCCTCA ACCTGCAACA
CTTTTCTTGG GATAAAAAAA 2201 CCGGCATATC GGCAAAAGGC GGCGCACACG
GTCTGCATAT CGCCGAGTTG 2251 CACAATTTCT TCAAACCGCC CTTCGAACAC
AATCTGGTTT TAAACGGCGA 2301 CTGGGATGTC GCCTACGGGC GCAACGCGCG
CGGCTACCTC AATATCAGCC 2351 GGCAAAGCGG CGATGCCGTA TTGCCCGGCG
GGCAGGCTTT GGGTTTGAAC 2401 GCATTTTCCC TGAAAACGCG CTTTCAAAAC
GACCGCATCG GAATCCTGCT 2451 TGACGGCGGC GCGCGTTTCG GGCGGATTAA
CGCCGATTTG GGCATCGCCA 2501 ACGCCTTCGG CGGCAATATG GCAAATGCAC
CGCTCGGCGG CAGGATTACC 2551 GCCTCCCTTC CCGACTTGGG CGCATTGAAG
CCCTTTCTGC CCGCCGCCGC 2601 GCAAAACATT ACCGGCAGCC TGAATGCCGC
CGCGCAAATC GGCGGACGGG 2651 TAGGCTCTCC GTCCGTCAAT GCCGCCGTCA
ACGGCAGCAG CAACTACGGG 2701 AAAATCAACG GCAACATCAC CGTCGGGCAA
AGCCGCTCTT TCGATACCGC 2751 GCCTTTGGGC GGCAGGCTCA ACCTGACCGT
TGCCGATGCC GAAGTATTCC 2801 GCAACTTCCT ACCGGTCGGA CAAACCGTCA
AAGGCAGCCT GAATGCCGCC 2851 GTAACCCTCG GCGGCAGCAT CGCCGATCCG
CACTTGGGCG GCAGCATCAA 2901 CGGCGACAAA CTCTATTACC GCAACCAAAC
CCAAGGCATC ATCTTGGACA 2951 ACGGCTCGCT GCGTTCGCAT ATCGCGGGCA
GGAAATGGGT AATCGACAGC 3001 CTGAAATTCC GGCACGAAGG GACGGCGGAA
CTCTCCGGTA CGGTCGGTAT 3051 GGAAAACAGC GGACCCGATG TCGATATCGG
CGCGGTGTTC GACAAATACC 3101 GCATCCTGTC CCGCCCCAAC CGCCGCCTGA
CGGTTTCCGG CAACACCCGC 3151 CTGCGCTATT CGCCGCAAAA AGGCATATCC
GTTACCGGGA TGATTAAAAC 3201 GGATCAGGGG CTGTTCGGTT CGCAAAAATC
CTCGATGCCG TCCGTCGGCG 3251 ACGATGTCGT CGTATTAGGC GAAGTCAAAA
AAGAGGCGGC GGCACCGCTC 3301 CCCGTCAATA TGAACCTGAC TTTAGACCTC
AATGACGGCA TCCGCTTCGC 3351 CGGCTACGGC GCGGACGTTA CCATAGGCGG
CAAACTGACC CTGACCGCCC 3401 AATCGGGCGG AAGCGTACGG GGCGTGGGCA
CGGTCCGCGT CATCAAAGGG 3451 CGTTATAAGG CATACGGGCA GGATTTGGAC
ATTACCAAAG GCACGGTCTC 3501 CTTTGTCGGC CCGCTCAACG ATCCCAACCT
CAACATCCGC GCCGAACGCC 3551 GCCTTTCCCC CGTCGGTGCG GGCGTGGAAA
TATTGGGCAG CCTCAACAGC 3601 CCGCGCATTA CGCTGACGGC AAACGAACCG
ATGAGTGAAA AAGACAAGCT 3651 CTCTTGGCTC ATCCTCAACC GCGCCGGCAG
CGGCAGCAGC GGCGACAATG 3701 CCGCCCTGTC TGCAGCCGCA GGTGCGCTGC
TTGCCGGGCA AATCAACGAC 3751 CGCATCGGGC TGGTGGATGA TTTGGGCTTT
ACCAGCAAGC GCAGCCGCAA 3801 CGCGCAAACC GGCGAACTCA ACCCCGCCGA
ACAGGTGCTG ACCGTCGGCA 3851 AACAACTGAC CGGCAAACTC TACATCGGCT
ACGAATACAG CATCTCCAGC 3901 GCGGAACAGT CCGTCAAACT GATTTACCGG
CTGACCCGCG CCATACAGGC 3951 GGTTGCCCGT ATCGGCAGCC GTTCGTCGGG
CGGCGAGCTG ACATACACCA 4001 TACGTTTCGA CCGCTTCTCC GGTTCGGACA
AAAAAGACTC CGCCGGAAAC 4051 GGCAAAGGAA AATAA
This corresponds to the amino acid sequence <SEQ ID 1190; ORF
285-1>:
TABLE-US-01483 m285-1.pep 1 LKLSAALLSV LILAVCFLGW LAGTEAGLRF
GLYQIPSWFG VNISSQNLKG 51 TLLDGFDGDN WSIETEGADL KISRFRFAWK
PSELMRRSLH ITEISAGDIA 101 IVTKPTPPKE ERPPLSLPDS IDLPAAVYLD
RFETGKISMG KAFDKQTVYL 151 ERLDASYRYD RKGHRLDLKA ADTPWSSSSG
AASVGLKKPF ALDTAIYTKG 201 GLEGKTIHST ARLSGSLKDV RAELAIDGGN
IRLSGKSVIH PFAESLDKTL 251 EEVLVKGFNI NPAAFVPSLP DAGLNFDLTA
IPSFSDGIAL EGSLDLENTK 301 AGFADRNGIP VRQVLGGFVI RQDGTVHIGN
TSAALLGRGG IRLSGKIDTE 351 KDILDLNIGI NSVGAEDVLQ TAFKGRLDGS
IGIGGTTASP KISWQLGIGT 401 ARTDGSLAIA SDPANGQRKL VLDTVNIAAG
QGSLTAQGYL ELFKDRLLKL 451 DIRSRAFDPS RIDPQLPAGN INGSINLAGE
LAKEKFTGKM RFLPGTFNGV 501 PIAGSADIVY ESRHLPRAAV DLRLGRNIIK
TDGGFGKKGD RLNLNITAPD 551 LSRFGFGLAG SLNVRGHLSG DLDGGIRTFE
TDLSGAARNL HIGKAADIRS 601 LDFTLKGSPD TSRPIRADIK GSRLSLSGGA
AVVDTADLML DGTGVQHRIR 651 THAAMTLDGK PFKFDLDASG GINRELTRWK
GSIGILDIGG AFNLKLQNRM 701 TLEAGAERVA ASAANWQAMG GSLNLQHFSW
DKKTGISAKG GAHGLHIAEL 751 HNFFKPPFEH NLVLNGDWDV AYGRNARGYL
NISRQSGDAV LPGGQALGLN 801 AFSLKTRFQN DRIGILLDGG ARFGRINADL
GIANAFGGNM ANAPLGGRIT 851 ASLPDLGALK PFLPAAAQNI TGSLNAAAQI
GGRVGSPSVN AAVNGSSNYG 901 KINGNITVGQ SRSFDTAPLG GRLNLTVADA
EVFRNFLPVG QTVKGSLNAA 951 VTLGGSIADP HLGGSINGDK LYYRNQTQGI
ILDNGSLRSH IAGRKWVIDS 1001 LKFRHEGTAE LSGTVGMENS GPDVDIGAVF
DKYRILSRPN RRLTVSGNTR 1051 LRYSPQKGIS VTGMIKTDQG LFGSQKSSMP
SVGDDVVVLG EVKKEAAAPL 1101 PVNMNLTLDL NDGIRFAGYG ADVTIGGKLT
LTAQSGGSVR GVGTVRVIKG 1151 RYKAYGQDLD ITKGTVSFVG PLNDPNLNIR
AERRLSPVGA GVEILGSLNS 1201 PRITLTANEP MSEKDKLSWL ILNRAGSGSS
GDNAALSAAA GALLAGQIND 1251 RIGLVDDLGF TSKRSRNAQT GELNPAEQVL
TVGKQLTGKL YIGYEYSISS 1301 AEQSVKLIYR LTRAIQAVAR IGSRSSGGEL
TYTIRFDRFS GSDKKDSAGN 1351 GKGK* g285-1/m285-1 96.5% identity in
1354 aa overlap 10 20 30 40 50 60 g285-1.pep
LKLSAALLSVLILAVCFLGWIAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDN
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| m285-1
LKLSAALLSVLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDN 10 20
30 40 50 60 70 80 90 100 110 120 g285-1.pep
WSIETEGADLKISRFRFAWKPSELMRRSLHITDISAGDIAIVTKPTPPKEERPPQGLPDS
||||||||||||||||||||||||||||||||:||||||||||||||||||||| :|||| m285-1
WSIETEGADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDS 70 80
90 100 110 120 130 140 150 160 170 180 g285-1.pep
IDLPAAVYLDRFETGKISMGKTFDKQTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSG
|||||||||||||||||||||:|||||||||||:|:|||||||||||||||||||||||| m285-1
IDLPAAVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSG 130
140 150 160 170 180 190 200 210 220 230 240 g285-1.pep
SASVGLKKPFALDTAIYTKGGFEGETIHSTARLSGSLKDVRAELTIDGGNIRLSGKSVIH
:||||||||||||||||||||:||:|||||||||||||||||||:||||||||||||||| m285-1
AASVGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIH 190
200 210 220 230 240 250 260 270 280 290 300 g285-1.pep
PFAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTK
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| m285-1
PFAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTK 250
260 270 280 290 300 310 320 330 340 350 360 g285-1.pep
AGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
AGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGI 310
320 330 340 350 360 370 380 390 400 410 420 g285-1.pep
NSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGTGTARTDGSLAIASDPANEQRKL
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| m285-1
NSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKL 370
380 390 400 410 420 430 440 450 460 470 480 g285-1.pep
VFDTVNISAGEGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQFPAGDINGSIHLAGE
|:|||||:||:||||||||||||||||||||||||||||||||||:|||:|||||:|||| m285-1
VLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGE 430
440 450 460 470 480 490 500 510 520 530 540 g285-1.pep
LAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIVKLDGGFGKKGD
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| m285-1
LAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGD 490
500 510 520 530 540 550 560 570 580 590 600 g285-1.pep
RLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFELDLSGTARNLHIGKAADIRS
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| m285-1
RLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFELDLSGAARNLHIGKAADIRS 550
560 570 580 590 600 610 620 630 640 650 660 g285-1.pep
LDFTLKGSPGTSRPMRADIKGGRLSLSGGAAVVDTAGLTLEGTGAQHRIRTHAAMTLDGK
||||||||| ||||:||||||:|||||||||||||| | |:|||:||||||||||||||| m285-1
LDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQHRIRTHAAMTLDGK 610
620 630 640 650 660 670 680 690 700 710 720 g285-1.pep
PFKLDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAGAEHVAASAANWQAMG
|||:|||||||||||||||||||||||||||||||||||||||||||:|||||||||||| m285-1
PFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMG 670
680 690 700 710 720 730 740 750 760 770 780 g285-1.pep
GSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLVLNGDWDVAYGHNARGYL
|||||||||||:||||||||||:||||||||||||||||||||||||||||||:|||||| m285-1
GSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYL 730
740 750 760 770 780 790 800 810 820 830 840 g285-1.pep
NISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGARFGRINADLGIGNAFGGNM
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| m285-1
NISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGARFGRINADLGIANAFGGNM 790
800 810 820 830 840 850 860 870 880 890 900 g285-1.pep
ANTPLGGRITASLPDLGALKPFLPAAAQNITGSLNASAQIGGRVGSPSVNAAVNGSSNYG
||:|||||||||||||||||||||||||||||||||:||||||||||||||||||||||| m285-1
ANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYG 850
860 870 880 890 900 910 920 930 940 950 960 g285-1.pep
KINGNITVGQSRSFDTAPLGGRLNLTVADAEAFRNFLPVGQTVKGSLNAAVTLGGSIADP
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| m285-1
KINGNITVGQSRSFDTAPLGGRLNLTVADAEVERNFLPVGQTVKGSLNAAVTLGGSIADP 910
920 930 940 950 960 970 980 990 1000 1010 1020 g285-1.pep
HLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEGTAELSGTVSMENS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| m285-1
HLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENS 970
980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 g285-1.pep
VPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
GPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMP 1030
1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 g285-1.pep
SVGDDVVVLGEVKKEAAASLPVNMNLTLDLNDGIRFSGYGADVTIGGKLTLTAQPGGNVR
|||||||||||||||||| |||||||||||||||||:||||||||||||||||| ||:|| m285-1
SVGDDVVVLGEVKKEAAAPLPVNMNLTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVR 1090
1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 g285-1.pep
GVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
GVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNS 1150
1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 g285-1.pep
PRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
PRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGF 1210
1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 g285-1.pep
TSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYGISSAEQSVKLIYRLTRAIQAVAR
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| m285-1
TSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVAR 1270
1280 1290 1300 1310 1320 1330 1340 1350 g285-1.pep
IGSRSSGGELTYTIRFDRLFGSDKKDSAGNGKGK ||||||||||||||||||:
|||||||||||||| m285-1 IGSRSSGGELTYTIRFDRFSGSDKKDSAGNGKGKX 1330 1340
1350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1191>:
TABLE-US-01484 a285-1.seq 1 CTGAAGCTGT CGGCGGCACT GCTGTCTGTT
CTGATTTTGG CAGTATGTTT 51 CCTCGGCTGG CTCGCCGGCA CGGAAGCGGG
TTTGCGCTTC GGGCTGTACC 101 AAATCCCGTC TTGGTTCGGC GTAAACATTT
CCTCCCAAAA CCTCAAAGGC 151 ACGCTGCTCG ACGGCTTCGA CGGCGACAAC
TGGTCGATAG AAACCGAGGG 201 GGCAGACCTT AAAATCAGCC GCTTCCGCTT
CGCGTGGAAA CCGTCCGAAC 251 TGATGCGCCG CAGCCTGCAC ATTACCGAAA
TTTCCGCCGG CGACATCGCC 301 ATCGTTACCA AACCGACTCC GCCTAAAGAA
GAACGCCCGC CGCTCAGCCT 351 TCCCGACAGC ATAGACCTGC CTGCCGCCGT
CTATCTCGAC CGCTTCGAGA 401 CGGGCAAAAT CAGCATGGGC AAAGCCTTTG
ACAAACAAAC CGTCTATCTC 451 GAACGGCTGG ATGCTTCATA CCGTTACGAC
CGCAAAGGAC ACCGCCTCGA 501 CCTGAAGGCT GCCGACACGC CGTGGAGCAG
TTCGTCGGGG TCAGCCTCGG 551 TCGGCTTGAA AAAACCGTTT GCCCTCGATA
CCGCCATTTA CACCAAAGGC 601 GGACTCGAAG GCAAAACCAT ACACAGTACG
GCTCGGCTGA GCGGCAGCCT 651 GAAGGATGTG CGCGCCGAAC TGGCGATCGA
CGGCGGCAAT ATCCGCCTCT 701 CGGGAAAATC CGTCATCCAC CCGTTTGCCG
AATCATTGGA TAAAACATTG 751 GAAGAAGTAC TGGTCAAAGG GTTCAACATC
AATCCGTCCG CCTTCGTGCC 801 TTCCCTGCCC GATGCCGGGC TGAATTTCGA
CCTGACCGCC ATCCCGTCGT 851 TTTCAGACGG CATCGCGCTG GAAGGCTCGC
TCGATTTGGA AAACACCAAA 901 GCCGGCTTTG CCGACCGCAA CGGCATCCCC
GTCCGTCAGG TTTTAGGCAG 951 CTTTGTCATC CGGCAGGACG GCACGGTGCA
TATCGGCAAT ACGTCCGTCG 1001 CCCTGCTCGG ACGGGGCGGC ATCAGGCTGT
CGGGCAAAAT CGACACCGAA 1051 AAAGACATCC TCGATTTAAA TATAGGCATC
AACTCCGTCG GCGCGGAAGA 1101 CGTACTGCAA ACCGCGTTCA AAGGCAGGTT
GGACGGCAGC ATCGGCATCG 1151 GTGGCACGAC CGCCTCGCCC AAAATCTCTT
GGCAACTCGG CATCGGCACG 1201 GCGCGCACGG ACGGCAGCCT CGCCATTGCA
AGCGACCCCG CAAACGGACA 1251 GCGGAAACTG GTGCTCGACA CCGTCAACAT
CGCCGCCGGG CAAGGCAGCC 1301 TGACCGCGCA AGGCTATCTC GAGCTGTTTA
AAGACCGCCT GCTCAAGCTG 1351 GACATCCGTT CCCGCGCATT CGACCCTTCG
CGCATCGATC CGCAACTTCC 1401 GGCAGGCAAT ATCAACGGCT CAATAAACCT
TGCCGGCGAA CTGGCAAAAG 1451 AGAAATTCAC AGGCAAAATG CGGTTTTTAC
CCGGCACGTT CAACGGCGTA 1501 CCGATTGCCG GCAGTGCCGA CATTGTTTAC
GAGTCCCGCC ACCTTCCGCG 1551 TGCCGCCGTC GATTTGCGGC TGGGGCGGAA
CATTATTAAA ACAGACGGCG 1601 GCTTCGGCAA AAAAGGCGAC CGGCTTAACC
TCAATATCAC CGCACCCGAT 1651 TTATCCCGTT TCGGTTTCGG ACTCGCGGGG
TCTTTAAATG TACGCGGACA 1701 CCTTTCCGGC GATTTGGACG GTGGCATCCG
AACCTTTGAA ACCGACCTTT 1751 CCGGCGCGGC GCGCAACCTG CACATCGGCA
AGGCGGCAGA CATCCGTTCG 1801 CTCGATTTCA CGCTCAAAGG TTCGCCCGAC
ACAAGCCGCC CGATACGCGC 1851 CGACATCAAA GGCAGCCGCC TTTCGCTGTC
GGGCGGAGCG GAGGTTGTCG 1901 ATACCGCCGA CCTGATGCTG GACGGCACGG
GCGTGCAGCA CCGCATCCGC 1951 ACACACGCCG CCATGACGCT GGATGGCAAA
CCGTTCAAAT TCGATTTGGA 2001 CGCTTCAGGC GGCATCAACA GGGAACTTAC
CCGATGGAAA GGCAGCATCG 2051 GCATCCTCGA CATCGGCGGC GCATTCAACC
TCAAGCTGCA AAACCGTATG 2101 ACGCTCGAAG CCGGTGCGGA ACGCGTGGCG
GCAAGTGCGG CAAATTGGCA 2151 GGCAATGGGC GGCAGCCTCA ACCTGCAACA
CTTTTCTTGG GATAAAAAAA 2201 CCGGCATATC GGCAAAAGGC GGCGCACACG
GTCTGCATAT CGCCGAGTTG 2251 CACAATTTCT TCAAACCGCC CTTCGAACAC
AATCTGGTTT TAAACGGCGA 2301 CTGGGATGTC GCCTACGGGC GAAACGCGCG
CGGCTACCTC AATATCAGCC 2351 GGCAAAGCGG CGATGCCGTA TTGCCCGGCG
GGCAGGCTTT GGGTTTGAAC 2401 GCATTTTCCC TGAAAACGCG CTTTCAAAAC
GACCGTATCG GAATCCTGCT 2451 TGACGGCGGC GCGCGTTTCG GGCGGATTAA
CGCCGATTTG GACATCGGCA 2501 ACGCCTTCGG CGGCAATATG GCAAATGCAC
CGCTCGGCGG CAGGATTACC 2551 GCCTCCCTTC CCGACTTGGG CACATTGAAG
CCCTTTCTGC CCGCCGCCGC 2601 GCAAAACATT ACCGGCAGCC TGAATGCCGC
CGCGCAAATC GGCGGACGGG 2651 TCGGCTCTCC GTCCGTCAAT GCCGCCGTCA
ACGGCAGCAG CAACTACGGG 2701 AAAATCAACG GCAACATCAC CGTCGGGCAA
AGCCGCTCTT TCGATACCGC 2751 GCCTTTGGGC GGCAGGCTCA ACCTGACCGT
TGCCGATGCC GAAGTATTCC 2801 GCAACTTCCT ACCGGTCGGA CAAACCGTCA
AAGGCAGCCT GAATGCCGCC 2851 GTAACCCTCG GCGGCAGCAT CGCCGATCCG
CACTTGGGCG GCAGCATCAA 2901 CGGCGACAAA CTCTATTACC GCAACCAAAC
CCAAGGCATC ATCTTGGACA 2951 ACGGCTCGCT GCGTTCGCAT ATCGCGGGCA
GGAAATGGGT AATCGACAGC 3001 CTGAAATTCC GGCACGAAGG GACGGCGGAA
CTCTCCGGTA CGGTCGGTAT 3051 GGAAAACAGC GGACCCGATG TCGATATCGG
CGCGGTGTTC GACAAATACC 3101 GCATCCTGTC CCGCCCCAAC CGCCGCCTGA
CGGTTTCCGG CAACACCCGC 3151 CTGCGCTATT CGCCGCAAAA AGGCATATCC
GTTACCGGGA TGATTAAAAC 3201 GGATCAGGGG CTGTTCGGTT CGCAAAAATC
CTCGATGCCG TCCGTCGGCG 3251 ACGATGTCGT CGTATTAGGC GAAGTCAAAA
AAGAGGCGGC GGCACCGCTC 3301 CCCGTCAATA TGAACCTGAC TTTAGACCTC
AATGACGGCA TCCGCTTCGC 3351 CGGCTACGGC GCGGACGTTA CCATAGGCGG
CAAACTGACC CTGACCGCCC 3401 AATCGGGCGG AAGCGTGCGG GGCGTGGGCA
CGGTCCGCGT CATCAAAGGG 3451 CGTTATAAGG CATACGGGCA GGATTTGGAC
ATTACCAAAG GCACGGTCTC 3501 CTTTGTCGGC CCGCTCAACG ACCCCAACCT
CAACATCCGC GCCGAACGCC 3551 GCCTTTCCCC CGTCGGTGCG GGCGTGGAAA
TATTGGGCAG CCTCAACAGT 3601 CCGCGCATTA CGCTGACGGC AAACGAACCG
ATGAGTGAAA AAGACAAGCT 3651 CTCCTGGCTC ATCCTCAACC GCGCCGGCAG
TGGCAGCAGC GGCGACAATG 3701 CCGCCCTGTC CGCAGCCGCC GGCGCGCTGC
TTGCCGGGCA AATCAACGAC 3751 CGCATCGGGC TGGTGGATGA TTTGGGCTTT
ACCAGCAAGC GCAGCCGCAA 3801 CGCGCAAACC GGCGAACTCA ACCCCGCCGA
ACAGGTGCTG ACCGTCGGCA 3851 AACAACTGAC CGGCAAACTC TACATCGGCT
ACGAATACAG CATCTCCAGC 3901 GCGGAACAGT CCGTCAAACT GATTTACCGG
CTGACCCGCG CCATACAGGC 3951 GGTTGCCCGT ATCGGCAGCC GTTCGTCGGG
CGGCGAGCTG ACATACACCA 4001 TACGTTTCGA CCGCTTCTCC GGTTCGGACA
AAAAAGACTC CGCCGGAAAC 4051 AGCAAAGGAA AATAA
This corresponds to the amino acid sequence <SEQ ID 1192; ORF
285-1.a>:
TABLE-US-01485 a285-1.pep 1 LKLSAALLSV LILAVCFLGW LAGTEAGLRF
GLYQIPSWFG VNISSQNLKG 51 TLLDGFDGDN WSIETEGADL KISRFRFAWK
PSELMRRSLH ITEISAGDIA 101 IVTKPTPPKE ERPPLSLPDS IDLPAAVYLD
RFETGKISMG KAFDKQTVYL 151 ERLDASYRYD RKGHRLDLKA ADTPWSSSSG
SASVGLKKPF ALDTAIYTKG 201 GLEGKTIHST ARLSGSLKDV RAELAIDGGN
IRLSGKSVIH PFAESLDKTL 251 EEVLVKGFNI NPSAFVPSLP DAGLNFDLTA
IPSFSDGIAL EGSLDLENTK 301 AGFADRNGIP VRQVLGSFVI RQDGTVHIGN
TSVALLGRGG IRLSGKIDTE 351 KDILDLNIGI NSVGAEDVLQ TAFKGRLDGS
IGIGGTTASP KISWQLGIGT 401 ARTDGSLAIA SDPANGQRKL VLDTVNIAAG
QGSLTAQGYL ELFKDRLLKL 451 DIRSRAFDPS RIDPQLPAGN INGSINLAGE
LAKEKFTGKM RFLPGTFNGV 501 PIAGSADIVY ESRHLPRAAV DLRLGRNIIK
TDGGFGKKGD RLNLNITAPD 551 LSRFGFGLAG SLNVRGHLSG DLDGGIRTFE
TDLSGAARNL HIGKAADIRS 601 LDFTLKGSPD TSRPIRADIK GSRLSLSGGA
EVVDTADLML DGTGVQHRIR 651 THAAMTLDGK PFKFDLDASG GINRELTRWK
GSIGILDIGG AFNLKLQNRM 701 TLEAGAERVA ASAANWQAMG GSLNLQHFSW
DKKTGISAKG GAHGLHIAEL 751 HNFFKPPFEH NLVLNGDWDV AYGRNARGYL
NISRQSGDAV LPGGQALGLN 801 AFSLKTRFQN DRIGILLDGG ARFGRINADL
DIGNAFGGNM ANAPLGGRIT 851 ASLPDLGTLK PFLPAAAQNI TGSLNAAAQI
GGRVGSPSVN AAVNGSSNYG 901 KINGNITVGQ SRSFDTAPLG GRLNLTVADA
EVFRNFLPVG QTVKGSLNAA 951 VTLGGSIADP HLGGSINGDK LYYRNQTQGI
ILDNGSLRSH IAGRKWVIDS 1001 LKFRHEGTAE LSGTVGMENS GPDVDIGAVF
DKYRILSRPN RRLTVSGNTR 1051 LRYSPQKGIS VTGMIKTDQG LFGSQKSSMP
SVGDDVVVLG EVKKEAAAPL 1101 PVNMNLTLDL NDGIRFAGYG ADVTIGGKLT
LTAQSGGSVR GVGTVRVIKG 1151 RYKAYGQDLD ITKGTVSFVG PLNDPNLNIR
AERRLSPVGA GVEILGSLNS 1201 PRITLTANEP MSEKDKLSWL ILNRAGSGSS
GDNAALSAAA GALLAGQIND 1251 RIGLVDDLGF TSKRSRNAQT GELNPAEQVL
TVGKQLTGKL YIGYEYSISS 1301 AEQSVKLIYR LTRAIQAVAR IGSRSSGGEL
TYTIRFDRFS GSDKKDSAGN 1351 SKGK* a285-1/m285-1 99.3% identity in
1354 aa overlap 10 20 30 40 50 60 a285-1.pep
LKLSAALLSVLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
LKLSAALLSVLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDN 10 20
30 40 50 60 70 80 90 100 110 120 a285-1.pep
WSIETEGADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
WSIETEGADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDS 70 80
90 100 110 120 130 140 150 160 170 180 a285-1.pep
IDLPAAVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
IDLPAAVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSG 130
140 150 160 170 180 190 200 210 220 230 240 a285-1.pep
SASVGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIH
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
AASVGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIH 190
200 210 220 230 240 250 260 270 280 290 300 a285-1.pep
PFAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTK
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| m285-1
PFAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTK 250
260 270 280 290 300 310 320 330 340 350 360 a285-1.pep
AGFADRNGIPVRQVLGSFVIRQDGTVHIGNTSVALLGRGGIRLSGKIDTEKDILDLNIGI
||||||||||||||||:|||||||||||||||:||||||||||||||||||||||||||| m285-1
AGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLNIGI 310
320 330 340 350 360 370 380 390 400 410 420 a285-1.pep
NSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
NSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKL 370
380 390 400 410 420 430 440 450 460 470 480 a285-1.pep
VLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
VLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNINGSINLAGE 430
440 450 460 470 480 490 500 510 520 530 540 a285-1.pep
LAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
LAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGD 490
500 510 520 530 540 550 560 570 580 590 600 a285-1.pep
RLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFELDLSGAARNLHIGKAADIRS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
RLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFELDLSGAARNLHIGKAADIRS 550
560 570 580 590 600 610 620 630 640 650 660 a285-1.pep
LDFTLKGSPDTSRPIRADIKGSRLSLSGGAEVVDTADLMLDGTGVQHRIRTHAAMTLDGK
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| m285-1
LDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQHRIRTHAAMTLDGK 610
620 630 640 650 660 670 680 690 700 710 720 a285-1.pep
PFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
PFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMG 670
680 690 700 710 720 730 740 750 760 770 780 a285-1.pep
GSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
GSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLVLNGDWDVAYGRNARGYL 730
740 750 760 770 780 790 800 810 820 830 840 a285-1.pep
NISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGARFGRINADLDIGNAFGGNM
|||||||||||||||||||||||||||||||||||||||||||||||||| |:||||||| m285-1
NISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGARFGRINADLGIANAFGGNM 790
800 810 820 830 840 850 860 870 880 890 900 a285-1.pep
ANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYG
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||| m285-1
ANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQIGGRVGSPSVNAAVNGSSNYG 850
860 870 880 890 900 910 920 930 940 950 960 a285-1.pep
KINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
KINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADP 910
920 930 940 950 960 970 980 990 1000 1010 1020 a285-1.pep
HLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
HLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRKWVIDSLKFRHEGTAELSGTVGMENS 970
980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 a285-1.pep
GPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
GPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMP 1030
1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 a285-1.pep
SVGDDVVVLGEVKKEAAAPLPVNMNLTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
SVGDDVVVLGEVKKEAAAPLPVNMNLTLDLNDGIRFAGYGADVTIGGKLTLTAQSGGSVR 1090
1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 a285-1.pep
GVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
GVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAGVEILGSLNS 1150
1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 a285-1.pep
PRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
PRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDRIGLVDDLGF 1210
1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 a285-1.pep
TSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVAR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m285-1
TSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVAR 1270
1280 1290 1300 1310 1320 1330 1340 1350 a285-1.pep
IGSRSSGGELTYTIRFDRFSGSDKKDSAGNSKGKX
||||||||||||||||||||||||||||||:|||| m285-1
IGSRSSGGELTYTIRFDRFSGSDKKDSAGNGKGKX 1330 1340 1350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1193>:
TABLE-US-01486 g286.seq 1 atgcagaaca ccggtaccat gatgatcaaa
ccgaccgccc tgctcctgcc 51 ggctttattt ttctttccgc acgcatacgc
gcctgccgcc gacctttccg 101 aaaacaaggc ggcgggtttc gcattgttca
aaagcaaaag ccccgacacc 151 gaatcagtca aattaaaacc caaattcccc
gtccgcatcg acacgcagga 201 cagtgaaatc aaagatatgg tcgaagaaca
cctgccgctc atcacgcagc 251 agcaggaaga ggttttggat aaggaacaga
cgggattcct tgccgaagaa 301 gcaccggaca acgttaaaac aatgctccgc
agcaaaggct atttcagcag 351 caaggtcagc ctgacggaaa aagacggagc
ttatacggtg cacatcacac 401 cgggcccgcg caccaaaatc gccaacgtcg
gcgtcgccat cctcggcgac 451 atcctttcag acggcaacct cgccgaatac
taccgcaacg cgctggaaaa 501 ctggcagcag ccggtaggca gcgatttcga
tcaggacagt tgggaaaaca 551 gcaaaacttc cgtcctcggc gcggtaacgc
gcaaaggcta cccgcttgcc 601 aagctcggca acacccgggc ggccgtcaac
cccgataccg ccaccgccga 651 tttgaacgtc gtcgtggaca gcggccgccc
cattgccttc ggcgactttg 701 aaatcaccgg cacacagcgt taccccgaac
aaaccgtctc cggcctggcg 751 cgcttccaac cgggcacgcc ctacgacctc
gacctgctgc tcgacttcca 801 acaggcgctc gaacaaaacg ggcattattc
cggcgcgtcc gtacaagccg 851 acttcgaccg cctcccaagg ggaccgcgtc
cccgtcaaag tcagcgtaac 901 cgaggtcaaa cgccacaaac tcgaaaccgg
catccgcctc gattcggaat 951 acggtttggg cggcaaaatc gcctacgact
attacaacct cttcaacaaa 1001 ggctatatcg gctcggtcgt ctgggatatg
gacaaatacg aaaccacgct 1051 tgccgccggc atcagccagc cgcgcaacta
tcggggcaac tactggacaa 1101 gcaacgtttc ctacaaccgt tcgaccaccc
aaaacctcga aaaacgcgcc 1151 ttctccggcg gcatctggta tgtgcgcgac
cgcgcgggca tcgatgccag 1201 gctgggggcg gaatttctcg cagaaggccg
gaaaatcccc ggctcggatg 1251 tcgatttggg caacagccac gccacgatgc
tgaccgcctc ttggaaacgc 1301 cagctgctca acaacgtgct gcaccccgaa
aacggccatt acctcgacgg 1351 caaaatcggg acgactttgg gcacattcct
gtcctccacc gcgctaatcc 1401 gcacctctgc ccgcgcaggt tatttcttca
cgcccgaaaa caaaaaactc 1451 ggcacgttca tcatacgcgg acaagcgggt
tacaccgttg cacgcgacaa 1501 tgccgatgtc ccctcggggc tgatgttccg
cagcggcggc gcgtcttccg 1551 tgcgcggtta cgaacttga
This corresponds to the amino acid sequence <SEQ ID 1194; ORF
286.ng>:
TABLE-US-01487 g286.pep 1 MQNTGTMMIK PTALLLPALF FFPHAYAPAA
DLSENKAAGF ALFKSKSPDT 51 ESVKLKPKFP VRIDTQDSEI KDMVEEHLPL
ITQQQEEVLD KEQTGFLAEE 101 APDNVKTMLR SKGYFSSKVS LTEKDGAYTV
HITPGPRTKI ANVGVAILGD 151 ILSDGNLAEY YRNALENWQQ PVGSDFDQDS
WENSKTSVLG AVTRKGYPLA 201 KLGNTRAAVN PDTATADLNV VVDSGRPIAF
GDFEITGTQR YPEQTVSGLA 251 RFQPGTPYDL DLLLDFQQAL EQNGHYSGAS
VQADFDRLPR GPRPRQSQRN 301 RGQTPQTRNR HPPRFGIRFG RQNRLRLLQP
LQQRLYRLGR LGYGQIRNHA 351 CRRHQPAAQL SGQLLDKQRF LQPFDHPKPR
KTRLLRRHLV CARPRGHRCQ 401 AGGGISRRRP ENPRLGCRFG QQPRHDADRL
LETPAAQQRA APRKRPLPRR 451 QNRDDFGHIP VLHRANPHLC PRRLFLHARK
QKTRHVHHTR TSGLHRCTRQ 501 CRCPLGADVP QRRRVFRARL RT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1195>:
TABLE-US-01488 m286.seq 1 ATGCACGACA CCCGTACCAT GATGATCAAA
CCGACCGCCC TGCTCCTGCC 51 GGCTTTATTT TTCTTTCCGC ACGCATACGC
GCCTGCCGCC GACCTTTCCG 101 AAAACAAGGC GGCGGGTTTC GCATTGTTCA
AAAACAAAAG CCCCGACACC 151 GAATCAGTCA AATTAAAACC CAAATTCCCC
GTCCTCATCG ACACGCAGGA 201 CAGTGAAATC AAAGATATGG TCGAAGAACA
CCTGCCGCTC ATCACGCAGC 251 AGCAGGAAGA AGTATTGGAC AAGGAACAGA
CGGGCTTCCT CGCCGAAGAA 301 GCGCCGGACA ACGTTAAAAC GATGCTCCGC
AGCAAAGGCT ATTTCAGCAG 351 CAAAGTCAGC CTGACGGAAA AAGACGGAGC
TTATACGGTA CACATCACAC 401 CGGGCCCGCG CACCAAAATC GCCAACGTCG
GCGTCGCCAT CCTCGGCGAC 451 ATCCTTTCAG ACGGCAACCT CGCCGAATAC
TACCGCAACG CGCTGGAAAA 501 CTGGCAGCAG CCGGTAGGCA GCGATTTCGA
TCAGGACAGT TGGGAAAACA 551 GCAAAACTTC CGTCCTCGGC GCGGTAACGC
GCAAAGCCTA CCCGCTTGCC 601 AAGCTCGGCA ATACGCAGGC GGCCGTCAAC
CCCGATACCG CCACCGCCGA 651 TTTGAACGTC GTCGTGGACA GCGGCCGCCC
CATCGCCTTC GGCGACTTTG 701 AAATCACCGG CACACAGCGT TACCCCGAAC
AAATCGTCTC CGGCCTTGCG 751 CGTTTCCAGC CCGGTATGCC GTACGACCTC
GACCTGCTGC TCGACTTCCA 801 ACAGGCGCTC GAACAAAACG GGCATTATTC
CGGCGCGTCC GTACAAGCCG 851 ACTTCGACCG CCTCCAAGGC GACCGCGTCC
CCGTCAAAGT CAGCGTAACC 901 GAGGTCAAAC GCCACAAACT CGAAACCGGC
ATCCGCCTCG ATTCGGAATA 951 CGGTTTGGGC GGCAAAATCG CCTACGACTA
TTACAACCTC TTCAACAAAG 1001 GCTATATCGG TTCGGTCGTC TGGGATATGG
ACAAATACGA AACCACGCTT 1051 GCCGCCGGCA TCAGCCAGCC GCGCAACTAT
CGGGGCAACT ACTGGACAAG 1101 CAACGTTTCC TACAACCGTT CGACCACCCA
AAACCTCGAA AAACGCGCCT 1151 TCTCCGGCGG CGTCTGGTAT GTGCGCGACC
GCGCGGGCAT CGATGCCAGG 1201 CTGGGGGCGG AATTTCTCGC AGAAGGCCGG
AAAATCCCCG GCTCGGCTGT 1251 CGATTTGGGC AACAGCCACG CCACGATGCT
GACCGCCTCT TGGAAACGCC 1301 AGCTGCTCAA CAACGTGCTG CATCCCGAAA
ACGGCCATTA CCTCGACGGC 1351 AAAATCGGTA CGACTTTGGG CACATTCCTG
TCCTCCACCG CGCTGATCCG 1401 CACCTCTGCC CGTGCAGGTT ATTTCTTCAC
GCCCGAAAAC AAAAAACTCG 1451 GCACGTTCAT CATACGCGGA CAAGCGGGTT
ACACCGTTGC CCGCGACAAT 1501 GCCGACGTTC CTTCAGGGCT GATGTTCCGC
AGCGGCGGCG CGTCTTCCGT 1551 GCGCGGTTAC GAACTCGACA GCATCGGACT
TGCCGGCCCG AACGGATCGG 1601 TCCTGCCCGA ACGCGCCCTC CTGGTGGGCA
GCCTGGAATA CCAACTGCCG 1651 TTTACGCGCA CCCTTTCCGG CGCGGTGTTC
CACGATATGG GCGATGCCGC 1701 CGCCAATTTC AAACGTATGA AGCTGAAACA
CGGTTCGGGA CTGGGCGTGC 1751 GCTGGTTCAG CCCGCTTGCG CCGTTTTCCT
TCGACATCGC CTACGGGCAC 1801 AGCGATAAGA AAATCCGCTG GCACATCAGC
TTGGGAACGC GCTTCTAA
This corresponds to the amino acid sequence <SEQ ID 1196; ORF
286>:
TABLE-US-01489 m286.pep 1 MHDTRTMMIK PTALLLPALF FFPHAYAPAA
DLSENKAAGF ALFKNKSPDT 51 ESVKLKPKFP VLIDTQDSEI KDMVEEHLPL
ITQQQEEVLD KEQTGFLAEE 101 APDNVKTMLR SKGYFSSKVS LTEKDGAYTV
HITPGPRTKI ANVGVAILGD 151 ILSDGNLAEY YRNALENWQQ PVGSDFDQDS
WENSKTSVLG AVTRKAYPLA 201 KLGNTQAAVN PDTATADLNV VVDSGRPIAF
GDFEITGTQR YPEQIVSGLA 251 RFQPGMPYDL DLLLDFQQAL EQNGHYSGAS
VQADFDRLQG DRVPVKVSVT 301 EVKRHKLETG IRLDSEYGLG GKIAYDYYNL
FNKGYIGSVV WDMDKYETTL 351 AAGISQPRNY RGNYWTSNVS YNRSTTQNLE
KRAFSGGVWY VRDRAGIDAR 401 LGAEFLAEGR KIPGSAVDLG NSHATMLTAS
WKRQLLNNVL HPENGHYLDG 451 KIGTTLGTFL SSTALIRTSA RAGYFFTPEN
KKLGTFIIRG QAGYTVARDN 501 ADVPSGLMFR SGGASSVRGY ELDSIGLAGP
NGSVLPERAL LVGSLEYQLP 551 FTRTLSGAVF HDMGDAAANF KRMKLKHGSG
LGVRWFSPLA PFSFDIAYGH 601 SDKKIRWHIS LGTRF*
Computer analysis of this amino acid sequence gave the following
results:
TABLE-US-01490 m286/g286 95.9% identity in 293 aa overlap 10 20 30
40 50 60 m286.pep
MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFKNKSPDTESVKLKPKFP |::|
|||||||||||||||||||||||||||||||||||||||:||||||||||||||| g286
MQNTGTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFKSKSPDTESVKLKPKFP 10 20
30 40 50 60 70 80 90 100 110 120 m286.pep
VLIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTMLRSKGYFSSKVS |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g286
VRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTMLRSKGYFSSKVS 70 80
90 100 110 120 130 140 150 160 170 180 m286.pep
LTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALENWQQPVGSDFDQDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g286
LTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALENWQQPVGSDFDQDS 130
140 150 160 170 180 190 200 210 220 230 240 m286.pep
WENSKTSVLGAVTRKAYPLAKLGNTQAAVNPDTATADLNVVVDSGRPIAFGDFEITGTQR
|||||||||||||||:|||||||||:|||||||||||||||||||||||||||||||||| g286
WENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATADLNVVVDSGRPIAFGDFEITGTQR 190
200 210 220 230 240 250 260 270 280 290 299 m286.pep
YPEQIVSGLARFQPGMPYDLDLLLDFQQALEQNGHYSGASVQADFDRL-QGDRVPVKVSV ||||
|||||||||| |||||||||||||||||||||||||||||||| :| | g286
YPEQTVSGLARFQPGTPYDLDLLLDFQQALEQNGHYSGASVQADFDRLPRGPRPRQSQRN 250
260 270 280 290 300 300 310 320 330 340 350 359 m286.pep
TEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKGYIGSVVWDMDKYETTLAAGISQPRN g286
RGQTPQTRNRHPPRFGIRFGRQNRLRLLQPLQQRLYRLGRLGYGQIRNHACRRHQPAAQL 310
320 330 340 350 360
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1197>:
TABLE-US-01491 a286.seq 1 ATGCACGACA CCCGTACCAT GATGATTAAA
CCGACCGCCC TGCTCCTGCC 51 GGCTTTATTT TTCTTTCCGC ACGCATACGC
GCCTGCCGCC GACCTTTCCG 101 AAAACAAGGC GGCGGGTTTC GCATTGTTCA
AAAACAAAAG CCCCGACACC 151 GAATCAGTTA AATTAAAACC CAAATTCCCC
GTCCGCATCG ACACGCAGGA 201 TAGTGAAATC AAAGATATGG TCGAAGAACA
CCTGCCGCTC ATCACGCAGC 251 AGCAGGAAGA AGTATTGGAC AAGGAACAGA
CGGGCTTCCT CGCCGAAGAA 301 GCACCGGACA ACGTTAAAAC AATGCTCCGC
AGCAAAGGCT ATTTCAGCAG 351 CAAAGTCAGC CTGACGGAAA AAGACGGAGC
TTATACGGTA CACATCACAC 401 CGGGCCCGCG CACCAAAATC GCCAACGTCG
GCGTCGCCAT CCTCGGCGAC 451 ATCCTTTCAG ACGGCAACCT CGCCGAATAC
TACCGCAACG CGCTGGAAAA 501 CTGGCAGCAG CCGGTAGGCA GTGATTTCGA
TCAGGACAGT TGGGAAAACA 551 GCAAAACTTC CGTCCTCGGC GCGGTAACGC
GCAAAGCCTA CCCGCTTGCC 601 AAGCTCGGCA ACACCCGGGC GGCCGTCAAC
CCCGATACCG CCACCGCCGA 651 TTTGAACGTC GTCGTGGACA GCGGCCGCCC
CATCGCCTTC GGCGACTTTG 701 AAATTACCGG CACGCAGCGT TACCCCGAAC
AAATCGTCTC CGGCTTGGCG 751 CGCTTCCAAC CGGGCACGCC CTACGACCTC
GACCTGCTGC TCGACTTCCA 801 ACAGGCGCTC GAACAAAACG GGCATTATTC
CGGCGCGTCC GTACAAGCCG 851 ACTTCGACCG CCTCCAAGGC GACCGCGTCC
CCGTCAAAGT CAGCGTAACC 901 GAGGTCAAAC GCCACAAGCT CGAAACCGGC
ATCCGCCTCG ATTCGGAATA 951 CGGTTTGGGC GGCAAAATCG CCTACGACTA
TTACAACCTC TTCAACAAAG 1001 GCTATATCGG TTCGGTCGTC TGGGATATGG
ACAAATACGA AACCACGCTT 1051 GCCGCCGGCA TCAGCCAGCC GCGCAACTAT
CGGGGCAACT ACTGGACAAG 1101 CAACGTTTCC TACAACCGTT CGACCACCCA
AAACCTCGAA AAACGCGCCT 1151 TCTCCGGCGG CATCTGGTAT GTGCGCGACC
GCGCGGGCAT CGATGCCAGG 1201 CTGGGGGCGG AGTTTCTCGC AGAAGGCCGG
AAAATCCCCG GCTCGGATAT 1251 CGATTTGGGC AACAGCCACG CCACGATGCT
GACCGCCTCT TGGAAACGCC 1301 AGCTGCTCAA CAACGTGCTG CATCCCGAAA
ACGGCCATTA CCTCGACGGC 1351 AAAATCGGTA CGACTTTGGG CGCATTCCTG
TCCTCCACCG CGCTGATCCG 1401 CACCTCTGCC CGCGCAGGTT ATTTCTTCAC
GCCCGAAAAC AAAAAACTCG 1451 GCACGTTCAT CATACGCGGA CAAGCGGGTT
ACACCGTTGC CCGCGACAAT 1501 GCCAACGTTC CTTCAGGGCT GATGTTCCGC
AGCGGCGGCG CGTCTTCCGT 1551 GCGCGGTTAC GAACTCGACA GCATCGGGCT
TGCCGGCCCG AACGGATCGG 1601 TCCTGCCCGA ACGCGCCCTC TTGGTGGGCA
GCCTGGAATA CCAACTGCCG 1651 TTTACGCGCA CCCTTTCCGG CGCGGTGTTC
CACGATATGG GCGACGCCGC 1701 CGCCAATTTC AAACGTATGA AGCTGAAACA
CGGTTCGGGA CTGGGCGTGC 1751 GCTGGTTCAG CCCGCTCGCG CCGTTTTCCT
TCGACATCGC CTACGGGCAC 1801 AGCGACAAGA AAATCCGCTG GCACATCAGC
TTGGGAACGC GCTTCTAA
This corresponds to the amino acid sequence <SEQ ID 1198; ORF
286.a>:
TABLE-US-01492 a286.pep 1 MHDTRTMMIK PTALLLPALF FFPHAYAPAA
DLSENKAAGF ALFKNKSPDT 51 ESVKLKPKFP VRIDTQDSEI KDMVEEHLPL
ITQQQEEVLD KEQTGFLAEE 101 APDNVKTMLR SKGYFSSKVS LTEKDGAYTV
HITPGPRTKI ANVGVAILGD 151 ILSDGNLAEY YRNALENWQQ PVGSDFDQDS
WENSKTSVLG AVTRKAYPLA 201 KLGNTRAAVN PDTATADLNV VVDSGRPIAF
GDFEITGTQR YPEQIVSGLA 251 RFQPGTPYDL DLLLDFQQAL EQNGHYSGAS
VQADFDRLQG DRVPVKVSVT 301 EVKRHKLETG IRLDSEYGLG GKIAYDYYNL
FNKGYIGSVV WDMDKYETTL 351 AAGISQPRNY RGNYWTSNVS YNRSTTQNLE
KRAFSGGIWY VRDRAGIDAR 401 LGAEFLAEGR KIPGSDIDLG NSHATMLTAS
WKRQLLNNVL HPENGHYLDG 451 KIGTTLGAFL SSTALIRTSA RAGYFFTPEN
KKLGTFIIRG QAGYTVARDN 501 ANVPSGLMFR SGGASSVRGY ELDSIGLAGP
NGSVLPERAL LVGSLEYQLP 551 FTRTLSGAVF HDMGDAAANF KRMKLKHGSG
LGVRWFSPLA PFSFDIAYGH 601 SDKKIRWHIS LGTRF* m286/a286 98.7%
identity in 615 aa overlap 10 20 30 40 50 60 m286.pep
MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFKNKSPDTESVKLKPKFP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a286
MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFKNKSPDTESVKLKPKFP 10 20
30 40 50 60 70 80 90 100 110 120 m286.pep
VLIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTMLRSKGYFSSKVS |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a286
VRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTMLRSKGYFSSKVS 70 80
90 100 110 120 130 140 150 160 170 180 m286.pep
LTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALENWQQPVGSDFDQDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a286
LTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALENWQQPVGSDFDQDS 130
140 150 160 170 180 190 200 210 220 230 240 m286.pep
WENSKTSVLGAVTRKAYPLAKLGNTQAAVNPDTATADLNVVVDSGRPIAFGDFEITGTQR
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a286
WENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADLNVVVDSGRPIAFGDFEITGTQR 190
200 210 220 230 240 250 260 270 280 290 300 m286.pep
YPEQIVSGLARFQPGMPYDLDLLLDFQQALEQNGHYSGASVQADFDRLQGDRVPVKVSVT
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a286
YPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHYSGASVQADFDRLQGDRVPVKVSVT 250
260 270 280 290 300 310 320 330 340 350 360 m286.pep
EVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKGYIGSVVWDMDKYETTLAAGISQPRNY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a286
EVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKGYIGSVVWDMDKYETTLAAGISQPRNY 310
320 330 340 350 360 370 380 390 400 410 420 m286.pep
RGNYWTSNVSYNRSTTQNLEKRAFSGGVWYVRDRAGIDARLGAEFLAEGRKIPGSAVDLG
|||||||||||||||||||||||||||:||||||||||||||||||||||||||| :||| a286
RGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVRDRAGIDARLGAEFLAEGRKIPGSDIDLG 370
380 390 400 410 420 430 440 450 460 470 480 m286.pep
NSHATMLTASWKRQLLNNVLHPENGHYLDGKIGTTLGTFLSSTALIRTSARAGYFFTPEN
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| a286
NSHATMLTASWKRQLLNNVLHPENGHYLDGKIGTTLGAFLSSTALIRTSARAGYFFTPEN 430
440 450 460 470 480 490 500 510 520 530 540 m286.pep
KKLGTFIIRGQAGYTVARDNADVPSGLMFRSGGASSVRGYELDSIGLAGPNGSVLPERAL
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| a286
KKLGTFIIRGQAGYTVARDNANVPSGLMFRSGGASSVRGYELDSIGLAGPNGSVLPERAL 490
500 510 520 530 540 550 560 570 580 590 600 m286.pep
LVGSLEYQLPFTRTLSGAVFHDMGDAAANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a286
LVGSLEYQLPFTRTLSGAVFHDMGDAAANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGH 550
560 570 580 590 600 610 m286.pep SDKKIRWHISLGTRFX ||||||||||||||||
a286 SDKKIRWHISLGTRFX 610
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1199>:
TABLE-US-01493 g287.seq 1 atgtttaaac gcagtgtgat tgcaatggct
tgtatttttc ccctttcagc 51 ctgtgggggc ggcggtggcg gatcgcccga
tgtcaagtcg gcggacacgc 101 cgtcaaaacc ggccgccccc gttgttgctg
aaaatgccgg ggaaggggtg 151 ctgccgaaag aaaagaaaga tgaggaggca
gcgggcggtg cgccgcaagc 201 cgatacgcag gacgcaaccg ccggagaagg
cagccaagat atggcggcag 251 tttcggcaga aaatacaggc aatggcggtg
cggcaacaac ggacaacccc 301 aaaaatgaag acgcgggggc gcaaaatgat
atgccgcaaa atgccgccga 351 atccgcaaat caaacaggga acaaccaacc
cgccggttct tcagattccg 401 cccccgcgtc aaaccctgcc cctgcgaatg
gcggtagcga ttttggaagg 451 acgaacgtgg gcaattctgt tgtgattgac
ggaccgtcgc aaaatataac 501 gttgacccac tgtaaaggcg attcttgtaa
tggtgataat ttattggatg 551 aagaagcacc gtcaaaatca gaatttgaaa
aattaagtga tgaagaaaaa 601 attaagcgat ataaaaaaga cgagcaacgg
gagaattttg tcggtttggt 651 tgctgacagg gtaaaaaagg atggaactaa
caaatatatc atcttctata 701 cggacaaacc acctactcgt tctgcacggt
cgaggaggtc gcttccggcc 751 gagattccgc tgattcccgt caatcaggcc
gatacgctga ttgtggatgg 801 ggaagcggtc agcctgacgg ggcattccgg
caatatcttc gcgcccgaag 851 ggaattaccg gtatctgact tacggggcgg
aaaaattgcc cggcggatcg 901 tatgccctcc gtgtgcaagg cgaaccggca
aaaggcgaaa tgcttgttgg 951 cacggccgtg tacaacggcg aagtgctgca
tttccatatg gaaaacggcc 1001 gtccgtaccc gtccggaggc aggtttgccg
caaaagtcga tttcggcagc 1051 aaatctgtgg acggcattat cgacagcggc
gatgatttgc atatgggtac 1101 gcaaaaattc aaagccgcca tcgatggaaa
cggctttaag gggacttgga 1151 cggaaaatgg cggcggggat gtttccggaa
ggttttacgg cccggccggc 1201 gaggaagtgg cgggaaaata cagctatcgc
ccgacagatg ctgaaaaggg 1251 cggattcggc gtgtttgccg gcaaaaaaga
tcgggattga
This corresponds to the amino acid sequence <SEQ ID 1200; ORF
287.ng>:
TABLE-US-01494 g287.pep 1 MFKRSVIAMA CIFPLSACGG GGGGSPDVKS
ADTPSKPAAP VVAENAGEGV 51 LPKEKKDEEA AGGAPQADTQ DATAGEGSQD
MAAVSAENTG NGGAATTDNP 101 KNEDAGAQND MPQNAAESAN QTGNNQPAGS
SDSAPASNPA PANGGSDFGR 151 TNVGNSVVID GPSQNITLTH CKGDSCNGDN
LLDEEAPSKS EFEKLSDEEK 201 IKRYKKDEQR ENFVGLVADR VKKDGTNKYI
IFYTDKPPTR SARSRRSLPA 251 EIPLIPVNQA DTLIVDGEAV SLTGHSGNIF
APEGNYRYLT YGAEKLPGGS 301 YALRVQGEPA KGEMLVGTAV YNGEVLHFHM
ENGRPYPSGG RFAAKVDFGS 351 KSVDGIIDSG DDLHMGTQKF KAAIDGNGFK
GTWTENGGGD VSGRFYGPAG 401 EEVAGKYSYR PTDAEKGGFG VFAGKKDRD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1201>:
TABLE-US-01495 m287.seq 1 ATGTTTAAAC GCAGCGTAAT CGCAATGGCT
TGTATTTTTG CCCTTTCAGC 51 CTGCGGGGGC GGCGGTGGCG GATCGCCCGA
TGTCAAGTCG GCGGACACGC 101 TGTCAAAACC TGCCGCCCCT GTTGTTTCTG
AAAAAGAGAC AGAGGCAAAG 151 GAAGATGCGC CACAGGCAGG TTCTCAAGGA
CAGGGCGCGC CATCCGCACA 201 AGGCAGTCAA GATATGGCGG CGGTTTCGGA
AGAAAATACA GGCAATGGCG 251 GTGCGGTAAC AGCGGATAAT CCCAAAAATG
AAGACGAGGT GGCACAAAAT 301 GATATGCCGC AAAATGCCGC CGGTACAGAT
AGTTCGACAC CGAATCACAC 351 CCCGGATCCG AATATGCTTG CCGGAAATAT
GGAAAATCAA GCAACGGATG 401 CCGGGGAATC GTCTCAGCCG GCAAACCAAC
CGGATATGGC AAATGCGGCG 451 GACGGAATGC AGGGGGACGA TCCGTCGGCA
GGCGGGCAAA ATGCCGGCAA 501 TACGGCTGCC CAAGGTGCAA ATCAAGCCGG
AAACAATCAA GCCGCCGGTT 551 CTTCAGATCC CATCCCCGCG TCAAACCCTG
CACCTGCGAA TGGCGGTAGC 601 AATTTTGGAA GGGTTGATTT GGCTAATGGC
GTTTTGATTG ACGGGCCGTC 651 GCAAAATATA ACGTTGACCC ACTGTAAAGG
CGATTCTTGT AGTGGCAATA 701 ATTTCTTGGA TGAAGAAGTA CAGCTAAAAT
CAGAATTTGA AAAATTAAGT 751 GATGCAGACA AAATAAGTAA TTACAAGAAA
GATGGGAAGA ATGATAAATT 801 TGTCGGTTTG GTTGCCGATA GTGTGCAGAT
GAAGGGAATC AATCAATATA 851 TTATCTTTTA TAAACCTAAA CCCACTTCAT
TTGCGCGATT TAGGCGTTCT 901 GCACGGTCGA GGCGGTCGCT TCCGGCCGAG
ATGCCGCTGA TTCCCGTCAA 951 TCAGGCGGAT ACGCTGATTG TCGATGGGGA
AGCGGTCAGC CTGACGGGGC 1001 ATTCCGGCAA TATCTTCGCG CCCGAAGGGA
ATTACCGGTA TCTGACTTAC 1051 GGGGCGGAAA AATTGCCCGG CGGATCGTAT
GCCCTTCGTG TTCAAGGCGA 1101 ACCGGCAAAA GGCGAAATGC TTGCGGGCGC
GGCCGTGTAC AACGGCGAAG 1151 TACTGCATTT CCATACGGAA AACGGCCGTC
CGTACCCGAC CAGGGGCAGG 1201 TTTGCCGCAA AAGTCGATTT CGGCAGCAAA
TCTGTGGACG GCATTATCGA 1251 CAGCGGCGAT GATTTGCATA TGGGTACGCA
AAAATTCAAA GCCGCCATCG 1301 ATGGAAACGG CTTTAAGGGG ACTTGGACGG
AAAATGGCAG CGGGGATGTT 1351 TCCGGAAAGT TTTACGGCCC GGCCGGCGAG
GAAGTGGCGG GAAAATACAG 1401 CTATCGCCCG ACAGATGCGG AAAAGGGCGG
ATTCGGCGTG TTTGCCGGCA 1451 AAAAAGAGCA GGATTGA
This corresponds to the amino acid sequence <SEQ ID 1202; ORF
287>:
TABLE-US-01496 m287.pep 1 MFKRSVIAMA CIFALSACGG GGGGSPDVKS
ADTLSKPAAP VVSEKETEAK 51 EDAPQAGSQG QGAPSAQGSQ DMAAVSEENT
GNGGAVTADN PKNEDEVAQN 101 DMPQNAAGTD SSTPNHTPDP NMLAGNMENQ
ATDAGESSQP ANQPDMANAA 151 DGMQGDDPSA GGQNAGNTAA QGANQAGNNQ
AAGSSDPIPA SNPAPANGGS 201 NFGRVDLANG VLIDGPSQNI TLTHCKGDSC
SGNNFLDEEV QLKSEFEKLS 251 DADKISNYKK DGKNDKFVGL VADSVQMKGI
NQYIIFYKPK PTSFARFRRS 301 ARSRRSLPAE MPLIPVNQAD TLIVDGEAVS
LTGHSGNIFA PEGNYRYLTY 351 GAEKLPGGSY ALRVQGEPAK GEMLAGAAVY
NGEVLHFHTE NGRPYPTRGR 401 FAAKVDFGSK SVDGIIDSGD DLHMGTQKFK
AAIDGNGFKG TWTENGSGDV 451 SGKFYGPAGE EVAGKYSYRP TDAEKGGFGV
FAGKKEQD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01497 m287/g287 70.1% identity in 499 aa overlap 10 20 30
40 49 m287.pep
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE-----------KETEA
||||||||||||| ||||||||||||||||||| ||||||||:| |: || g287
MFKRSVIAMACIFPLSACGGGGGGSPDVKSADTPSKPAAPVVAENAGEGVLPKEKKDEEA 10 20
30 40 50 60 50 60 70 80 90 100 109 m287.pep
KEDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQNDMPQNAAGT ||||
:| | :::||||||||| ||||||||:|:||||||| |||||||||| g287
AGGAPQADTQD--ATAGEGSQDMAAVSAENTGNGGAATTDNPKNEDAGAQNDMPQNAA-- 70 80
90 100 110 110 120 130 140 150 160 169 m287.pep
DSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAADGMQGDDPSAGGQNAGNTA g287
------------------------------------------------------------ 170
180 190 200 210 220 229 m287.pep
AQGANQAGNNQAAGSSDPIPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLTHCKGDS
::|||:|||| ||||| ||||||||||||:|||::::|:|:||||||||||||||||| g287
-ESANQTGNNQPAGSSDSAPASNPAPANGGSDFGRTNVGNSVVIDGPSQNITLTHCKGDS 120
130 140 150 160 170 230 240 250 260 270 280 289 m287.pep
CSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKP
|:|:|:||||: ||||||||| :||: |||| : ::||||||| |: | |:||||| g287
CNGDNLLDEEAPSKSEFEKLSDEEKIKRYKKDEQRENFVGLVADRVKKDGTNKYIIFYTD 180
190 200 210 220 230 290 300 310 320 330 340 349 m287.pep
KPTSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLT || :
||||||||||||:|||||||||||||||||||||||||||||||||||||| g287
KPPT-----RSARSRRSLPAEIPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRYLT 240
250 260 270 280 290 350 360 370 380 390 400 409 m287.pep
YGAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGRFAAKVDFGS
|||||||||||||||||||||||||:|:||||||||||| |||||||: ||||||||||| g287
YGAEKLPGGSYALRVQGEPAKGEMLVGTAVYNGEVLHFHMENGRPYPSGGRFAAKVDFGS 300
310 320 330 340 350 410 420 430 440 450 460 469 m287.pep
KSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDVSGKFYGPAGEEVAGKYSYR
|||||||||||||||||||||||||||||||||||||:|||||:|||||||||||||||| g287
KSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRFYGPAGEEVAGKYSYR 360
370 380 390 400 410 470 480 489 m287.pep PTDAEKGGFGVFAGKKEQDX
||||||||||||||||::|| g287 PTDAEKGGFGVFAGKKDRDX 420 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1203>:
TABLE-US-01498 a287.seq 1 ATGTTTAAAC GCAGTGTGAT TGCAATGGCT
TGTATTGTTG CCCTTTCAGC 51 CTGTGGGGGC GGCGGTGGCG GATCGCCCGA
TGTTAAGTCG GCGGACACGC 101 TGTCAAAACC TGCCGCCCCT GTTGTTACTG
AAGATGTCGG GGAAGAGGTG 151 CTGCCGAAAG AAAAGAAAGA TGAGGAGGCG
GTGAGTGGTG CGCCGCAAGC 201 CGATACGCAG GACGCAACCG CCGGAAAAGG
CGGTCAAGAT ATGGCGGCAG 251 TTTCGGCAGA AAATACAGGC AATGGCGGTG
CGGCAACAAC GGATAATCCC 301 GAAAATAAAG ACGAGGGACC GCAAAATGAT
ATGCCGCAAA ATGCCGCCGA 351 TACAGATAGT TCGACACCGA ATCACACCCC
TGCACCGAAT ATGCCAACCA 401 GAGATATGGG AAACCAAGCA CCGGATGCCG
GGGAATCGGC ACAACCGGCA 451 AACCAACCGG ATATGGCAAA TGCGGCGGAC
GGAATGCAGG GGGACGATCC 501 GTCGGCAGGG GAAAATGCCG GCAATACGGC
AGATCAAGCT GCAAATCAAG 551 CTGAAAACAA TCAAGTCGGC GGCTCTCAAA
ATCCTGCCTC TTCAACCAAT 601 CCTAACGCCA CGAATGGCGG CAGCGATTTT
GGAAGGATAA ATGTAGCTAA 651 TGGCATCAAG CTTGACAGCG GTTCGGAAAA
TGTAACGTTG ACACATTGTA 701 AAGACAAAGT ATGCGATAGA GATTTCTTAG
ATGAAGAAGC ACCACCAAAA 751 TCAGAATTTG AAAAATTAAG TGATGAAGAA
AAAATTAATA AATATAAAAA 801 AGACGAGCAA CGAGAGAATT TTGTCGGTTT
GGTTGCTGAC AGGGTAGAAA 851 AGAATGGAAC TAACAAATAT GTCATCATTT
ATAAAGACAA GTCCGCTTCA 901 TCTTCATCTG CGCGATTCAG GCGTTCTGCA
CGGTCGAGGC GGTCGCTTCC 951 GGCCGAGATG CCGCTGATTC CCGTCAATCA
GGCGGATACG CTGATTGTCG 1001 ATGGGGAAGC GGTCAGCCTG ACGGGGCATT
CCGGCAATAT CTTCGCGCCC 1051 GAAGGGAATT ACCGGTATCT GACTTACGGG
GCGGAAAAAT TGTCCGGCGG 1101 ATCGTATGCC CTCAGTGTGC AAGGCGAACC
GGCAAAAGGC GAAATGCTTG 1151 CGGGCACGGC CGTGTACAAC GGCGAAGTGC
TGCATTTCCA TATGGAAAAC 1201 GGCCGTCCGT CCCCGTCCGG AGGCAGGTTT
GCCGCAAAAG TCGATTTCGG 1251 CAGCAAATCT GTGGACGGCA TTATCGACAG
CGGCGATGAT TTGCATATGG 1301 GTACGCAAAA ATTCAAAGCC GTTATCGATG
GAAACGGCTT TAAGGGGACT 1351 TGGACGGAAA ATGGCGGCGG GGATGTTTCC
GGAAGGTTTT ACGGCCCGGC 1401 CGGCGAAGAA GTGGCGGGAA AATACAGCTA
TCGCCCGACA GATGCGGAAA 1451 AGGGCGGATT CGGCGTGTTT GCCGGCAAAA
AAGAGCAGGA TTGA
This corresponds to the amino acid sequence <SEQ ID 1204; ORF
287.a>:
TABLE-US-01499 a287.pep 1 MFKRSVIAMA CIVALSACGG GGGGSPDVKS
ADTLSKPAAP VVTEDVGEEV 51 LPKEKKDEEA VSGAPQADTQ DATAGKGGQD
MAAVSAENTG NGGAATTDNP 101 ENKDEGPQND MPQNAADTDS STPNHTPAPN
MPTRDMGNQA PDAGESAQPA 151 NQPDMANAAD GMQGDDPSAG ENAGNTADQA
ANQAENNQVG GSQNPASSTN 201 PNATNGGSDF GRINVANGIK LDSGSENVTL
THCKDKVCDR DFLDEEAPPK 251 SEFEKLSDEE KINKYKKDEQ RENFVGLVAD
RVEKNGTNKY VIIYKDKSAS 301 SSSARFRRSA RSRRSLPAEM PLIPVNQADT
LIVDGEAVSL TGHSGNIFAP 351 EGNYRYLTYG AEKLSGGSYA LSVQGEPAKG
EMLAGTAVYN GEVLHFHMEN 401 GRPSPSGGRF AAKVDFGSKS VDGIIDSGDD
LHMGTQKFKA VIDGNGFKGT 451 WTENGGGDVS GRFYGPAGEE VAGKYSYRPT
DAEKGGFGVF AGKKEQD* m287/a287 77.2% identity in 501 aa overlap 10
20 30 40 49 m287.pep
MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE-----------KETEA
|||||||||||| |||||||||||||||||||||||||||||:| |: || a287
MFKRSVIAMACIVALSACGGGGGGSPDVKSADTLSKPAAPVVTEDVGEEVLPKEKKDEEA 10 20
30 40 50 60 50 60 70 80 90 100 109 m287.pep
KEDAPQAGSQGQGAPSAQGSQDMAAVSEENTGNGGAVTADNPKNEDEVAQNDMPQNAAGT ||||
:| | :::|:||||||| ||||||||:|:|||:|:|| ||||||||| | a287
VSGAPQADTQ--DATAGKGGQDMAAVSAENTGNGGAATTDNPENKDEGPQNDMPQNAADT 70 80
90 100 110 110 120 130 140 150 160 169 m287.pep
DSSTPNHTPDPNMLAGNMENQATDAGESSQPANQPDMANAADGMQGDDPSAGGQNAGNTA
||||||||| ||| : :| ||| |||||:||||||||||||||||||||||| :|||||| a287
DSSTPNHTPAPNMPTRDMGNQAPDAGESAQPANQPDMANAADGMQGDDPSAG-ENAGNTA 120
130 140 150 160 170 170 180 190 200 210 220 229 m287.pep
AQGANQAGNNQAAGSSDPIPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLTHCKGDS |:||||
|||::||::| ::|| :||||:|||:::|||: :|: |:|:|||||| a287
DQAANQAENNQVGGSQNPASSTNPNATNGGSDFGRINVANGIKLDSGSENVTLTHCKDKV 180
190 200 210 220 230 230 240 250 260 270 280 289 m287.pep
CSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDKFVGLVADSVQMKGINQYIIFYKP |:
:|||||: ||||||||| :||::|||| : ::||||||| |: :| |:|:|:|| a287
CD-RDFLDEEAPPKSEFEKLSDEEKINKYKKDEQRENFVGLVADRVEKNGTNKYVIIYKD 240
250 260 270 280 290 290 300 310 320 330 340 m287.pep
KP--TSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRY | :|
||||||||||||||||||||||||||||||||||||||||||||||||||||| a287
KSASSSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIFAPEGNYRY 300
310 320 330 340 350 350 360 370 380 390 400 m287.pep
LTYGAEKLPGGSYALRVQGEPAKGEMLAGAAVYNGEVLHFHTENGRPYPTRGRFAAKVDF
|||||||| |||||| |||||||||||||:||||||||||| ||||| |: ||||||||| a287
LTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHMENGRPSPSGGRFAAKVDF 360
370 380 390 400 410 410 420 430 440 450 460 m287.pep
GSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGSGDVSGKFYGPAGEEVAGKYS
||||||||||||||||||||||||:||||||||||||||:|||||:|||||||||||||| a287
GSKSVDGIIDSGDDLHMGTQKFKAVIDGNGFKGTWTENGGGDVSGRFYGPAGEEVAGKYS 420
430 440 450 460 470 470 480 489 m287.pep YRPTDAEKGGFGVFAGKKEQDX
|||||||||||||||||||||| a287 YRPTDAEKGGFGVFAGKKEQDX 480 490
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1205>:
TABLE-US-01500 g288.seq 1 atgcacaccg gacaggcggt aagccgggtt
ctgtctcgga cagtcattcc 51 tctaggcata ccgttgccgg tatgctcaag
caacctaccc gaacgctcgg 101 cgggcagcgt cattgcgttc tgtttggtct
tgctccgaat ggggtttggc 151 ctgccgcata ttgttaccaa atgcgcggtg
cgcccttacc gcaccttttc 201 acccttgcct gtgctgccaa agcagccatc
ggcggttttg ctttctgttc 251 cactttccgt cgcgttaccg cgcccggccg
ttaaccggca ttctaccctg 301 cggagcccgg actttcctcc ccgtatgcct
tacgcgatac gcggcgactg 351 tctgcccgtc ccgtgtgcgg cgcggattat
aacacgaaac gcaaaaatgc 401 cgtctgaaac ggtacaggtt tcagacggca
tacagcctaa actacacacc 451 ctgtttcagg ctggcttcga tgaagccgtc
caagtcgccg tccaatacgg 501 ctttgtggtt gccgacttcg tagcctgtac
gcaagtcttt gatgcgtga
This corresponds to the amino acid sequence <SEQ ID 1206; ORF
288.ng>:
TABLE-US-01501 g288.pep 1 MHTGQAVSRV LSRTVIPLGI PLPVCSSNLP
ERSAGSVIAF CLVLLRMGFG 51 LPHIVTKCAV RPYRTFSPLP VLPKQPSAVL
LSVPLSVALP RPAVNRHSTL 101 RSPDFPPRMP YAIRGDCLPV PCAARIITRN
AKMPSETVQV SDGIQPKLHT 151 LFQAGFDEAV QVAVQYGFVV ADFVACTQVF DA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1207>:
TABLE-US-01502 m288.seq 1 ATGCACACCG GACAGGCGGT AAGCCGGGTT
CTGTCTCGGA CAGTCATTCC 51 TCTAGGCATA CCGTTACCGG TATGCTCAAG
CAACCTACCC GAACGCTCGG 101 CGGGCAGCGT CATTGCGTTC TGTTTGGTCT
TGCTCCGAAT GGGGTTTGGC 151 CTGCCGCATA TTGTTACCAA ATGCGCGGTG
CGCCCTTACC GCACCTTTTC 201 ACCCTTACCT GTGCTGCCAA AGCAGCCATC
GGCGGTTTTG CTTTCTGTTC 251 CACTTTCCGT CGCGTTACCG CGCCCGGCCG
TTAACCGGCA TTCTACCCTG 301 CGGAGCCCGG ACTTTCCTCC CCGTATGCCT
TACGCGATAC GCGGCGACTG 351 TCTGCCCGTC CCGTGTGCGG CGCGGATTAT
AACACGAAAC ACAAAAATGC 401 CGTCTGAAAC GGTACAGGTT TCAGACGGCA
TACAGCCTAA ACTACACGCC 451 CTGTTTCAGG CTGGCTTCGA TGAAGCCGTC
CAAGTCGCCA TCCAATACGG 501 CTTTGGTGTT GCCGACTTCG TAGCCTGTAC
GCAAGTCTTT GATACGTGA
This corresponds to the amino acid sequence <SEQ ID 1208; ORF
288>:
TABLE-US-01503 m288.pep 1 MHTGQAVSRV LSRTVIPLGI PLPVCSSNLP
ERSAGSVIAF CLVLLRMGFG 51 LPHIVTKCAV RPYRTFSPLP VLPKQPSAVL
LSVPLSVALP RPAVNRHSTL 101 RSPDFPPRMP YAIRGDCLPV PCAARIITRN
TKMPSETVQV SDGIQPKLHA 151 LFQAGFDEAV QVAIQYGFGV ADFVACTQVF DT*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01504 m288/g288 97.8% identity in 181 aa overlap 10 20 30
40 50 60 m288.pep
MHTGQAVSRVLSRTVIPLGIPLPVCSSNLPERSAGSVIAFCLVLLRMGFGLPHIVTKCAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g288
MHTGQAVSRVLSRTVIPLGIPLPVCSSNLPERSAGSVIAFCLVLLRMGFGLPHIVTKCAV 10 20
30 40 50 60 70 80 90 100 110 120 m288.pep
RPYRTFSPLPVLPKQPSAVLLSVPLSVALPRPAVNRHSTLRSPDFPPRMPYAIRGDCLPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g288
RPYRTFSPLPVLPKQPSAVLLSVPLSVALPRPAVNRHSTLRSPDFPPRMPYAIRGDCLPV 70 80
90 100 110 120 130 140 150 160 170 180 m288.pep
PCAARIITRNTKMPSETVQVSDGIQPKLHALFQAGFDEAVQVAIQYGFGVADFVACTQVF
||||||||||:||||||||||||||||||:|||||||||||||:|||| ||||||||||| g288
PCAARIITRNAKMPSETVQVSDGIQPKLHTLFQAGFDEAVQVAVQYGFVVADFVACTQVF 130
140 150 160 170 180 m288.pep DTX |:| g288 DAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1209>:
TABLE-US-01505 a288.seq 1 ATGCACACCG GACAGGCGGT AAGCCGGGTT
CTGTCTCGGA CAGTCATTCC 51 TCTAGGCATA CCGTTGCCGG TATGCTCAAG
CAACCTACCC GAACGCTCGG 101 CGGGCAGCGT CATTGCGTTC TGTTTGGTCT
TGCTCCGAAT GGGGTTTGGC 151 CTGCCGCATA TTGTTACCAA ATGCGCGGTG
CGCCCTTACC GCACCTTTTC 201 ACCCTTGCCT GTGCTGCCAA AGCAGCCATC
GGCGGTTTTG CTTTCTGTTC 251 CACTTTCCGT CGCGTTACCG CGCCCGGCCG
TTAACCGGCA TTCTACCCTG 301 CGGAGCCCGG ACTTTCCTCC CCGTATGCCT
TACGCGATAC GCGGCGACTG 351 TCTGCCCGTC CCGTGTGCGG CGCGGATTAT
AACACGAAAC GCAAAAATGC 401 CGTCTGAAAC GGTACAGGTT TCAGACGGCA
TACAGCCTAA ACTACACGCC 451 CTGTTTCAGG CTGGCTTCGA TAAAGCCGTC
CAAGTCGCCG TCCAATACGG 501 CTTTGGTGTT GCCGACTTCG TAGCCTGTGC
GCAAGTCTTT AATGCGTGA
This corresponds to the amino acid sequence <SEQ ID 1210; ORF
288.a>:
TABLE-US-01506 a288.pep 1 MHTGQAVSRV LSRTVIPLGI PLPVCSSNLP
ERSAGSVIAF CLVLLRMGFG 51 LPHIVTKCAV RPYRTFSPLP VLPKQPSAVL
LSVPLSVALP RPAVNRHSTL 101 RSPDFPPRMP YAIRGDCLPV PCAARIITRN
AKMPSETVQV SDGIQPKLHA 151 LFQAGFDKAV QVAVQYGFGV ADFVACAQVF NA*
m288/a288 97.2% identity in 181 aa overlap 10 20 30 40 50 60
m288.pep
MHTGQAVSRVLSRTVIPLGIPLPVCSSNLPERSAGSVIAFCLVLLRMGFGLPHIVTKCAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a288
MHTGQAVSRVLSRTVIPLGIPLPVCSSNLPERSAGSVIAFCLVLLRMGFGLPHIVTKCAV 10 20
30 40 50 60 70 80 90 100 110 120 m288.pep
RPYRTFSPLPVLPKQPSAVLLSVPLSVALPRPAVNRHSTLRSPDFPPRMPYAIRGDCLPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a288
RPYRTFSPLPVLPKQPSAVLLSVPLSVALPRPAVNRHSTLRSPDFPPRMPYAIRGDCLPV 70 80
90 100 110 120 130 140 150 160 170 180 m288.pep
PCAARIITRNTKMPSETVQVSDGIQPKLHALFQAGFDEAVQVAIQYGFGVADFVACTQVF
||||||||||:||||||||||||||||||||||||||:|||||:||||||||||||:||| a288
PCAARIITRNAKMPSETVQVSDGIQPKLHALFQAGFDKAVQVAVQYGFGVADFVACAQVF 130
140 150 160 170 180 m288.pep DTX :: a288 NAX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1211>:
TABLE-US-01507 g290.seq 1 atggcaaaaa tgatgaaatg ggcggctgtt
gcggcggtcg cggcggcagc 51 ggtttggggc ggatggtctt atctgaagcc
cgaaccgcag gctgcttata 101 ttacggaagc ggtcaggcgc ggcgatatca
gccggacggt ttccgcgacg 151 ggcgagattt cgccgtccaa cctggtatcg
gtcggcgcgc aggcttcggg 201 gcagattaaa aagctttatg tcaaactcgg
gcaacaggtc aaaaagggcg 251 atttgattgc ggaaatcaat tcgaccacgc
agaccaacac gatcgatatg 301 gaaaaatcca aattggaaac gtatcaggcg
aagctggtgt ccgcacagat 351 tgcattgggc agcgcggaaa aaaaatataa
gcgtcaggcg gcgttgtgga 401 aggatgatgc gacctctaaa gaagatttgg
aaagcgcgca ggatgcgctt 451 gccgccgcca aagccaatgt tgccgagttg
aaggctttaa tcagacagag 501 caaaatttcc atcaataccg ccgagtcgga
tttgggctac acgcgcatta 551 ccgcgacgat ggacggcacg gtggtggcga
ttcccgtgga agaggggcag 601 actgtgaacg cggcgcagtc tacgccgacg
attgtccaat tggcgaatct 651 ggatatgatg ttgaacaaaa tgcagattgc
cgagggcgat attaccaagg 701 tgaaggcggg gcaggatatt tcgtttacga
ttttgtccga accggatacg 751 ccgattaagg cgaagctcga cagcgtcgac
cccgggctga ccacgatgtc 801 gtcgggcggc tacaacagca gtacggatac
ggcttccaat gcggtctatt 851 attatgcccg ttcgtttgtg ccgaatccgg
acggcaaact cgccacgggg 901 atgacgacgc agaatacggt tgaaatcgac
ggtgtgaaaa atgtgttgct 951 tattccgtcg ctgaccgtga aaaatcgcgg
cggcaaggcg ttcgtacgcg 1001 tgttgggtgc ggacggcaag gcagtggaac
gcgaaatccg gaccggtatg 1051 aaagacagta tgaataccga agtgaaaagc
gggttgaaag agggggacaa 1101 agtggtcatc tccgaaataa ccgccgccga
gcagcaggaa agcggcgaac 1151 gcgccctagg cggcccgccg cgccgataa
This corresponds to the amino acid sequence <SEQ ID 1212; ORF
290.ng>:
TABLE-US-01508 g290.pep 1 MAKMMKWAAV AAVAAAAVWG GWSYLKPEPQ
AAYITEAVRR GDISRTVSAT 51 GEISPSNLVS VGAQASGQIK KLYVKLGQQV
KKGDLIAEIN STTQTNTIDM 101 EKSKLETYQA KLVSAQIALG SAEKKYKRQA
ALWKDDATSK EDLESAQDAL 151 AAAKANVAEL KALIRQSKIS INTAESDLGY
TRITATMDGT VVAIPVEEGQ 201 TVNAAQSTPT IVQLANLDMM LNKMQIAEGD
ITKVKAGQDI SFTILSEPDT 251 PIKAKLDSVD PGLTTMSSGG YNSSTDTASN
AVYYYARSFV PNPDGKLATG 301 MTTQNTVEID GVKNVLLIPS LTVKNRGGKA
FVRVLGADGK AVEREIRTGM 351 KDSMNTEVKS GLKEGDKVVI SEITAAEQQE
SGERALGGPP RR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1213>:
TABLE-US-01509 m290.seq (partial) 1 ..GTATCGGTCG GCGCGCAGGC
ATCGGGGCAG ATTAAGATAC TTTATGTCAA 51 ACTCGGGCAA CAGGTTAAAA
AGGGCGATTT GATTGCGGAA ATCAATTCGA 101 CCTCGCAGAC CAATACGCTC
AATACGGAAA AATCCAAGTT GGAAACGTAT 151 CAGGCGAAGC TGGTGTCGGC
ACAGATTGCA TTGGGCAGCG CGGAGAAGAA 201 ATATAAGCGT CAGGCGGCGT
TATGGAAGGA AAACGCGACT TCCAAAGAGG 251 ATTTGGAAAG CGCGCAGGAT
GCGTTTGCCG CCGCCAAAGC CAATGTTGCC 301 GAGCTGAAGG CTTTAATCAG
ACAGAGCAAA ATTTCCATCA ATACCGCCGA 351 GTCGGAATTG GGCTACACGC
GCATTACCGC AACGATGGAC GGCACGGTGG 401 TGGCGATTCT CGTGGAAGAG
GGGCAGACTG TGAACGCGGC GCAGTCTACG 451 CCGACGATTG TCCAATTGGC
GAATCTGGAT ATGATGTTGA ACAAAATGCA 501 GATTGCCGAG GGCGATATTA
CCAAGGTGAA GGCGGGGCAG GATATTTCGT 551 TTACGATTTT GTCCGAACCG
GATACGCCGA TTAAGGCGAA GCTCGACAGC 601 GTCGACCCCG GGCTGACCAC
GATGTCGTCG GGCGGTTACA ACAGCAGTAC 651 GGATACGGCT TCCAATGCGG
TCTACTATTA TGCCCGTTCG TTTGTGCCGA 701 ATCCGGACGG CAAACTCGCC
ACGGGGATGA CGACGCAGAA TACGGTTGAA 751 ATCGACGGCG TGAAAAATGT
GCTGATTATT CCGTCGCTGA CCGTGAAAAA 801 TCGCGGCGGC AAGGCGTTTG
TGCGCGTGTT GGGTGCGGAC GGCAAGGCGG 851 CGGAACGCGA AATCCGGACC
GGTATGAGAG ACAGTATGAA TACCGAAGTA 901 AAAAGCGGGT TGAAAGAGGG
GGACAAAGTG GTCATCTCCG AAATAACCGC 951 CGCCGAGCAA CAGGAAAGCG
GCGAACGCGC CCTAGGCGGC CCGCCGCGCC 1001 GATAA
This corresponds to the amino acid sequence <SEQ ID 1214; ORF
290>:
TABLE-US-01510 m290.pep (partial) 1 ..VSVGAQASGQ IKILYVKLGQ
QVKKGDLIAE INSTSQTNTL NTEKSKLETY 51 QAKLVSAQIA LGSAEKKYKR
QAALWKENAT SKEDLESAQD AFAAAKANVA 101 ELKALIRQSK ISINTAESEL
GYTRITATMD GTVVAILVEE GQTVNAAQST 151 PTIVQLANLD MMLNKMQIAE
GDITKVKAGQ DISFTILSEP DTPIKAKLDS 201 VDPGLTTMSS GGYNSSTDTA
SNAVYYYARS FVPNPDGKLA TGMTTQNTVE 251 IDGVKNVLII PSLTVKNRGG
KAFVRVLGAD GKAAEREIRT GMRDSMNTEV 301 KSGLKEGDKV VISEITAAEQ
QESGERALGG PPRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01511 m290/g290 96.1% identity in 334 aa overlap 10 20 30
m290.pep VSVGAQASGQIKILYVKLGQQVKKGDLIAE ||||||||||||
||||||||||||||||| g290
PQAAYITEAVRRGDISRTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAE 30 40
50 60 70 80 40 50 60 70 80 90 m290.pep
INSTSQTNTLNTEKSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQD
||||:||||:: ||||||||||||||||||||||||||||||||||::|||||||||||| g290
INSTTQTNTIDMEKSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQD 90 100
110 120 130 140 100 110 120 130 140 150 m290.pep
AFAAAKANVAELKALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQST
|:||||||||||||||||||||||||||:||||||||||||||||| ||||||||||||| g290
ALAAAKANVAELKALIRQSKISINTAESDLGYTRITATMDGTVVAIPVEEGQTVNAAQST 150
160 170 180 190 200 160 170 180 190 200 210 m290.pep
PTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g290
PTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSS 210
220 230 240 250 260 220 230 240 250 260 270 m290.pep
GGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGG
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| g290
GGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLLIPSLTVKNRGG 270
280 290 300 310 320 280 290 300 310 320 330 m290.pep
KAFVRVLGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGG
|||||||||||||:||||||||:||||||||||||||||||||||||||||||||||||| g290
KAFVRVLGADGKAVEREIRTGMKDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGG 330
340 350 360 370 380 m290.pep PPRRX ||||| g290 PPRRX 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1215>:
TABLE-US-01512 a290.seq 1 ATGGCAAAAA TGATGAAATG GGCGGCTGTT
GCGGCGGTCG CGGCGGCAGC 51 GGTTTGGGGC GGATGGTCTT ATCTGAAGCC
CGAGCCGCAG GCTGCTTATA 101 TTACGGAAAC GGTCAGGCGC GGCGACATCA
GCCGGACGGT TTCTGCAACA 151 GGGGAGATTT CGCCGTCCAA CCTGGTATCG
GTCGGCGCGC AGGCATCGGG 201 GCAGATTAAG AAACTTTATG TCAAACTCGG
GCAACAGGTT AAAAAGGGCG 251 ATTTGATTGC GGAAATCAAT TCGACCTCGC
AGACCAATAC GCTCAATACG 301 GAAAAATCCA AATTGGAAAC GTATCAGGCG
AAGCTGGTGT CGGCACAGAT 351 TGCATTGGGC AGCGCGGAGA AGAAATATAA
GCGTCAGGCG GCGTTGTGGA 401 AGGATGATGC GACCGCTAAA GAAGATTTGG
AAAGCGCACA GGATGCGCTT 451 GCCGCCGCCA AAGCCAATGT TGCCGAGCTG
AAGGCTCTAA TCAGACAGAG 501 CAAAATTTCC ATCAATACCG CCGAGTCGGA
ATTGGGCTAC ACGCGCATTA 551 CCGCAACGAT GGACGGCACG GTGGTGGCGA
TTCTCGTGGA AGAGGGGCAG 601 ACTGTGAACG CGGCGCAGTC TACGCCGACG
ATTGTCCAAT TGGCGAATCT 651 GGATATGATG TTGAACAAAA TGCAGATTGC
CGAGGGCGAT ATTACCAAGG 701 TGAAGGCGGG GCAGGATATT TCGTTTACGA
TTTTGTCCGA ACCGGATACG 751 CCGATTAAGG CGAAGCTCGA CAGCGTCGAC
CCCGGGCTGA CCACGATGTC 801 GTCGGGCGGC TACAACAGCA GTACGGATAC
GGCTTCCAAT GCGGTCTACT 851 ATTATGCCCG TTCGTTTGTG CCGAATCCGG
ACGGCAAACT CGCCACGGGG 901 ATGACGACGC AGAATACGGT TGAAATCGAC
GGTGTGAAAA ATGTGCTGAT 951 TATTCCGTCG CTGACCGTGA AAAATCGCGG
CGGCAGGGCG TTTGTGCGCG 1001 TGTTGGGTGC AGACGGCAAG GCGGCGGAAC
GCGAAATCCG GACCGGTATG 1051 AGAGACAGTA TGAATACCGA AGTAAAAAGC
GGGTTGAAAG AGGGGGACAA 1101 AGTGGTCATC TCCGAAATAA CCGCCGCCGA
GCAGCAGGAA AGCGGCGAAC 1151 GCGCCCTAGG CGGCCCGCCG CGCCGATAA
This corresponds to the amino acid sequence <SEQ ID 1216; ORF
290.a>:
TABLE-US-01513 a290.pep 1 MAKMMKWAAV AAVAAAAVWG GWSYLKPEPQ
AAYITETVRR GDISRTVSAT 51 GEISPSNLVS VGAQASGQIK KLYVKLGQQV
KKGDLIAEIN STSQTNTLNT 101 EKSKLETYQA KLVSAQIALG SAEKKYKRQA
ALWKDDATAK EDLESAQDAL 151 AAAKANVAEL KALIRQSKIS INTAESELGY
TRITATMDGT VVAILVEEGQ 201 TVNAAQSTPT IVQLANLDMM LNKMQIAEGD
ITKVKAGQDI SFTILSEPDT 251 PIKAKLDSVD PGLTTMSSGG YNSSTDTASN
AVYYYARSFV PNPDGKLATG 301 MTTQNTVEID GVKNVLIIPS LTVKNRGGRA
FVRVLGADGK AAEREIRTGM 351 RDSMNTEVKS GLKEGDKVVI SEITAAEQQE
SGERALGGPP RR* m290/a290 98.2% identity in 334 aa overlap 10 20 30
m290.pep VSVGAQASGQIKILYVKLGQQVKKGDLIAE ||||||||||||
||||||||||||||||| a290
PQAAYITETVRRGDISRTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAE 30 40
50 60 70 80 40 50 60 70 80 90 m290.pep
INSTSQTNTLNTEKSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQD
||||||||||||||||||||||||||||||||||||||||||||||::||:||||||||| a290
INSTSQTNTLNTEKSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQD 90 100
110 120 130 140 100 110 120 130 140 150 m290.pep
AFAAAKANVAELKALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQST
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a290
ALAAAKANVAELKALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQST 150
160 170 180 190 200 160 170 180 190 200 210 m290.pep
PTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a290
PTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSS 210
220 230 240 250 260 220 230 240 250 260 270 m290.pep
GGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a290
GGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGG 270
280 290 300 310 320 280 290 300 310 320 330 m290.pep
KAFVRVLGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGG
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a290
RAFVRVLGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGG 330
340 350 360 370 380 m290.pep PPRRX ||||| a290 PPRRX 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1217>:
TABLE-US-01514 g292.seq 1 atgaaaacca agttaatcaa aatcttgacc
ccctttaccg tcctgccgct 51 gctggcttgc gggcaaacgc ccgtttccaa
tgccaacgcc gaatccgccg 101 tcaaagccga atccgccggc aaatccgttg
ccgcttcttt gaaagcgcgt 151 ttggaaaaaa cctattccgc ccaagatttg
aaagtgttga gcgtcagcga 201 aacaccggtc aaaggcattt acgaagtcgt
cgtcagcggc aggcagatta 251 tctacaccga tgccgaaggc ggctatatgt
tcgtcggcga actcatcaac 301 atcgacacgc gcaaaaacct gaccgaagaa
cgcgccgccg atttgaacaa 351 aatcgacttc gcctccctgc ctttggacaa
agccatcaaa gaagtacgcg 401 gcaacggcaa gctgaaagtc gccgtcttct
ccgaccccga ttgtccgttc 451 tgcaaacgct tggaacatga gtttgaaaaa
atgaccgacg tgacggttta 501 cagctttatg atgcccattg ccggcctgca
cccagatgcc gcgcgcaagg 551 cgcaaatctt atggtgtcag cccgaccgtg
ccaaagcgtg gacggattgg 601 atgcgtaaag gcaaattccc ggtcggcggc
agcatctgcg acaatcccgt 651 cgcggaaacc acttccttgg gcgaacagtt
cggcttcaac ggcacgccga 701 cccttcgtct tccccaacgg gcgcacccaa
agcggttaca gcccgatgcc 751 ccaactggag gaaatcatcc gcaaaaacca
gcagtaaacc cgcaatga
This corresponds to the amino acid sequence <SEQ ID 1218; ORF
292.ng>:
TABLE-US-01515 g292.pep 1 MKTKLIKILT PFTVLPLLAC GQTPVSNANA
ESAVKAESAG KSVAASLKAR 51 LEKTYSAQDL KVLSVSETPV KGIYEVVVSG
RQIIYTDAEG GYMFVGELIN 101 IDTRKNLTEE RAADLNKIDF ASLPLDKAIK
EVRGNGKLKV AVFSDPDCPF 151 CKRLEHEFEK MTDVTVYSFM MPIAGLHPDA
ARKAQILWCQ PDRAKAWTDW 201 MRKGKFPVGG SICDNPVAET TSLGEQFGFN
GTPTLRLPQR AHPKRLQPDA 251 PTGGNHPQKP AVNPQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1219>:
TABLE-US-01516 m292.seq 1 ATGAAAACCA AGTTAATCAA AATCTTGACC
CCCTTTACCG TCCTCCCGCT 51 GCTGGCTTGC GGGCAAACGC CCGTTTCCAA
TGCCAACGCC GAACCCGCCG 101 TCAAAGCCGA GTCCGCCGGC AAATCCGTTG
CCGCCTCTTT GAAAGCGCGT 151 TTGGAAAAAA CCTATTCCGC CCAAGATTTG
AAAGTGTTGA GCGTCAGCGA 201 AACACCGGTC AAAGGCATTT ACGAAGTCGT
CGTCAGCGGC AGGCAGATTA 251 TCTACACCGA TGCCGAAGGC GGCTATATGT
TCGTCGGCGA ACTCATCAAC 301 ATCGACACGC GCAAAAACCT GACCGAAGAA
CGCGCCGCCG ATTTGAACAA 351 AATCGACTTC GCCTCCCTGC CTTTGGACAA
AGCCATCAAA GAAGTGCGCG 401 GCAACGGCAA GCTGAAAGTC GCCGTCTTCT
CCGACCCCGA TTGTCCGTTC 451 TGCAAACGCT TGGAACACGA GTTTGAAAAA
ATGACCGACG TGACGGTTTA 501 CAGCTTTATG ATGCCCATTG CCGGCCTGCA
CCCCGATGCC GCGCGCAAGG 551 CGCAAATCTT ATGGTGTCAG CCCGACCGCG
CCAAAGCGTG GACGGATTGG 601 ATGCGTAAAG GCAAATTCCC GGTCGGCGGC
AGCATCTGCG ACAATCCCGT 651 CGCGGAAACC ACTTCCTTGG GCGAACAATT
CGGCTTCAAC GGCACGCCGA 701 CCCTCGTCTT CCCCAACGGG CGCAGCCAAA
GCGGCTACAG CCCGATGCCC 751 CAACTGGAGG AAATCATCCG CAAAAATCAA TAA
This corresponds to the amino acid sequence <SEQ ID 1220; ORF
292>:
TABLE-US-01517 m292.pep 1 MKTKLIKILT PFTVLPLLAC GQTPVSNANA
EPAVKAESAG KSVAASLKAR 51 LEKTYSAQDL KVLSVSETPV KGIYEVVVSG
RQIIYTDAEG GYMFVGELIN 101 IDTRKNLTEE RAADLNKIDF ASLPLDKAIK
EVRGNGKLKV AVFSDPDCPF 151 CKRLEHEFEK MTDVTVYSFM MPIAGLHPDA
ARKAQILWCQ PDRAKAWTDW 201 MRKGKFPVGG SICDNPVAET TSLGEQFGFN
GTPTLVFPNG RSQSGYSPMP 251 QLEEIIRKNQ *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-01518 m292/g292 98.7% identity in 238 aa overlap 10 20 30
40 50 60 m292.pep
MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVAASLKARLEKTYSAQDL
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| g292
MKTKLIKILTPFTVLPLLACGQTPVSNANAESAVKAESAGKSVAASLKARLEKTYSAQDL 10 20
30 40 50 60 70 80 90 100 110 120 m292.pep
KVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINIDTRKNLTEERAADLNKIDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g292
KVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINIDTRKNLTEERAADLNKIDF 70 80
90 100 110 120 130 140 150 160 170 180 m292.pep
ASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g292
ASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDA 130
140 150 160 170 180 190 200 210 220 230 240 m292.pep
ARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVFPNG
||||||||||||||||||||||||||||||||||||||||||||||||||||||| :|: g292
ARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLRLPQR 190
200 210 220 230 240 250 260 m292.pep RSQSGYSPMPQLEEIIRKNQX g292
AHPKRLQPDAPTGGNHPQKPAVNPQX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1221>:
TABLE-US-01519 a292.seq 1 ATGAAAACCA AGTTAATCAA AATCTTGACC
CCCTTTACCG TCCTCCCGCT 51 GCTGGCTTGC GGGCAAACGC CCGTTTCCAA
TGCCAACGCC GAACCCGCCG 101 TCAAAGCCGA GTCCGCCGGC AAATCCGTTG
CCGCCTCTTT GAAAGCGCGT 151 TTGGAAAAAA CCTATTCCGC CCAAGATTTG
AAAGTGTTGA GCGTCAGCGA 201 AACACCGGTC AAAGGCATTT ACGAAGTCGT
CGTCAGCGGC AGGCAGATTA 251 TCTACACCGA TGCCGAAGGC GGCTATATGT
TCGTCGGCGA ACTCATCAAC 301 ATCGACACGC GCAAAAACCT GACCGAAGAA
CGCGCCGCCG ATTTGAACAA 351 AATCGACTTC GCCTCCCTGC CTTTGGACAA
AGCCATCAAA GAAGTGCGCG 401 GCAACGGCAA GCTGAAAGTC GCCGTCTTCT
CCGACCCCGA TTGTCCGTTC 451 TGCAAACGCT TGGAACACGA GTTTGAAAAA
ATGACCGACG TGACGGTTTA 501 CAGCTTTATG ATGCCCATTG CCGGCCTGCA
CCCCGATGCC GCGCGCAAGG 551 CGCAAATCTT ATGGTGTCAG CCCGACCGCG
CCAAAGCGTG GACGGATTGG 601 ATGCGTAAAG GCAAATTCCC GGTCGGCGGC
AGCATCTGCG ACAATCCCGT 651 CGCGGAAACC ACTTCCTTGG GCGAACAATT
CGGCTTCAAC GGCACGCCGA 701 CCCTCGTCTT CCCCAACGGG CGCAGCCAAA
GCGGCTACAG CCCGATGCCC 751 CAACTGGAGG AAATCATCCG CAAAAATCAA TAA
This corresponds to the amino acid sequence <SEQ ID 1222; ORF
292.a>:
TABLE-US-01520 a292.pep 1 MKTKLIKILT PFTVLPLLAC GQTPVSNANA
EPAVKAESAG KSVAASLKAR 51 LEKTYSAQDL KVLSVSETPV KGIYEVVVSG
RQIIYTDAEG GYMFVGELIN 101 IDTRKNLTEE RAADLNKIDF ASLPLDKAIK
EVRGNGKLKV AVFSDPDCPF 151 CKRLEHEFEK MTDVTVYSFM MPIAGLHPDA
ARKAQILWCQ PDRAKAWTDW 201 MRKGKFPVGG SICDNPVAET TSLGEQFGFN
GTPTLVFPNG RSQSGYSPMP 251 QLEEIIRKNQ * m292/a292 100.0% identity in
260 aa overlap 10 20 30 40 50 60 m292.pep
MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVAASLKARLEKTYSAQDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a292
MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVAASLKARLEKTYSAQDL 10 20
30 40 50 60 70 80 90 100 110 120 m292.pep
KVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINIDTRKNLTEERAADLNKIDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a292
KVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINIDTRKNLTEERAADLNKIDF 70 80
90 100 110 120 130 140 150 160 170 180 m292.pep
ASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a292
ASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDA 130
140 150 160 170 180 190 200 210 220 230 240 m292.pep
ARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVFPNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a292
ARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVFPNG 190
200 210 220 230 240 250 260 m292.pep RSQSGYSPMPQLEEIIRKNQX
||||||||||||||||||||| a292 RSQSGYSPMPQLEEIIRKNQX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1223>:
TABLE-US-01521 g294.seq (partial) 1 atgcgtatta cctgtgcgcc
gatgtcgctt ttgtcggcgg cagtctggtc 51 ggttcgggct gtcagaacat
catcgaaccg ctttcctgcg gcgttacgac 101 gatattcggc ttttcgacct
acaatttttc cgaagcctgc cggcacgcct 151 tggcatcggg tgcggcggtt
caagtcgaat cggcggacgc gtggcgtgaa 201 gccgttgaaa aaaccttatc
tggcgagggg ggcggaatgc agatgcaggc 251 gcgcgtggac ggctttatcg
cacaacatcg cggagcgggc gcgagaatcg 301 ccgaggcggt gcgggaagcg
gtatgcggac atcgggggcg atagtgatac 351 aatccgtatc cgagttttcc
ggttggagca tcgtatgagt atttatgccg 401 tcgcgcacat catccacctg
tattgcgcca ccgcctttgt cggcggcgtg 451 ttttttgaag tgctggtttt
gtccgtcctg catacgggac gggtgtcgcg 501 cgaggcgcgg cgcgaagtgg
aaaaggcaat gtcttaccgc gccgtcaggg 551 tgatgccgtt tgcggtcgga
ctgctgttcg ccaggggaac tctagagtcg 601 actgcagcag catgccctc...
This corresponds to the amino acid sequence <SEQ ID 1224; ORF
294.ng>:
TABLE-US-01522 g294.pep (partial) 1 MRITCAPMSL LSAAVWSVRA
VRTSSNRFPA ALRRYSAFRP TIFPKPAGTP 51 WHRVRRFKSN RRTRGVKPLK
KPYLARGAEC RCRRAWTALS HNIAERARES 101 PRRCGKRYAD IGGDSDTIRI
RVFRLEHRMS IYAVAHIIHL YCATAFVGGV 151 FFEVLVLSVL HTGRVSREAR
REVEKAMSYR AVRVMPFAVG LLFARGTLES 201 TAAACP....
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1225>:
TABLE-US-01523 m294.seq 1 ATGCGTATTA CCTGTGCGCC GATGTCGCTT
TTGTCGGCGG CAGTCTGGTC 51 GATTCGGGTT GTCAGAACAT CATCGAACCG
CTTTCCTGCG GCGTTCCGAC 101 GATATTCGGC TTTTCAACCT ACAATTTTTC
CGAAGCCTGC CGACACGCCT 151 TGGCATCGGG TGCGGCGGTT CAAGTCGAAT
CGGCGGATGC GTGGCGGGAA 201 GCCGTTGAAA AAACCTTATC GTCCGAGGGG
GGGGGGATGC AGATGCAGGC 251 GCGCGTGGAC GGCTTTATCG CACAACATCG
CGGAGCGGGC GCGAGAATCG 301 CCGAGGCGGT GCGGGAAGCG GTATGCGGAT
ATCGGGGGCG ATAGTGATAC 351 AATCCGTATC CGAGTTTTCC GTTTGGAGCA
TCGTATGAGT ATTTATGCCG 401 TCGCGCACAT CGTTCATCTG TATTGCGCTA
TTGCCTTTGT CGGCGGCGTG 451 TTTTTTGAAG TGCTGGTTTT GTCCGTCCTG
CATACGGGAC GGGTGTCGCG 501 CGAGGCGCGG CGCGAAGTGG AAAAGGCAAT
GTCTTACCGC GCCGTCAGGG 551 TGATGCCGTT TGTGGTCGGA CTGCTGTTCG
CCAGCGGCAT CGTGATGGCG 601 GCAAACCGCT ATCTTTCTAT ATTGGGCGAA
CCGTTTGCCA CTTCCTTCGG 651 TACGATGCTG ACGCTGAAAA TCCTGTTGGC
GTTCAGCGTA TTGGCGCACT 701 TCGCCATCGC CGTCGTCAAA ATGGCGCGTT
CCACACTGAC GGTCGGTTGG 751 TCGAAATACA TACACGCCGT CGTCTTTACC
CATATGcTGC TGATTGTCTT 801 TTTGGCAAAA GCGATGTTTT ATATCAGCTG GTAA
This corresponds to the amino acid sequence <SEQ ID 1226; ORF
294>:
TABLE-US-01524 m294.pep 1 MRITCAPMSL LSAAVWSIRV VRTSSNRFPA
AFRRYSAFQP TIFPKPADTP 51 WHRVRRFKSN RRMRGGKPLK KPYRPRGGGC
RCRRAWTALS HNIAERARES 101 PRRCGKRYAD IGGDSDTIRI RVFRLEHRMS
IYAVAHIVHL YCAIAFVGGV 151 FFEVLVLSVL HTGRVSREAR REVEKAMSYR
AVRVMPFVVG LLFASGIVMA 201 ANRYLSILGE PFATSFGTML TLKILLAFSV
LAHFAIAVVK MARSTLTVGW 251 SKYIHAVVFT HMLLIVFLAK AMFYISW* g294/m294
92.3% identity in 196 aa overlap 10 20 30 40 50 60 g294.pep
MRITCAPMSLLSAAVWSVRAVRTSSNRFPAALRRYSAFRPTIFPKPAGTPWHRVRRFKSN
|||||||||||||||||:|:|||||||||||:||||||:|||||||| ||||||||||| m294
MRITCAPMSLLSAAVWSIRVVRTSSNRFPAAFRRYSAFQPTIFPKPADTPWHRVRRFKSN 10 20
30 40 50 60 70 80 90 100 110 120 g294.pep
RRTRGVKPLKKPYLARGAECRCRRAWTALSHNIAERARESPRRCGKRYADIGGDSDTIRI || ||
||||||| ||: ||||||||||||||||||||||||||||||||||||||||| m294
RRMRGGKPLKKPYRPRGGGCRCRRAWTALSHNIAERARESPRRCGKRYADIGGDSDTIRI 70 80
90 100 110 120 130 140 150 160 170 180 g294.pep
RVFRLEHRMSIYAVAHIIHLYCATAFVGGVFFEVLVLSVLHTGRVSREARREVEKAMSYR
|||||||||||||||||:||||| |||||||||||||||||||||||||||||||||||| m294
RVFRLEHRMSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSREARREVEKAMSYR 130
140 150 160 170 180 190 200 g294.pep AVRVMPFAVGLLFARGTLESTAAACP
|||||||:|||||| | m294
AVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSVLAHFAIAVVK 190
200 210 220 230 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1227>:
TABLE-US-01525 a294.seq 1 ATGCGTATTA CCTGTGCGCC GATGTCGCTT
TTGTCGGCGG CAGTCTGGTC 51 GATTCGGGCT GTCAGAACAT CATCGAACCG
CTTTCCTGCG GCGTTCCGAC 101 GATATTCGGC TTTTCGACCT ACAATTTTTC
CGAAGCCTGC CGGCACGCCT 151 TGGCATCGGG TGCGGCGGTT CAAGTCGAAT
CGGCGGACGC GTGGCGGGAA 201 GCCGTTGAAA AAAACTTATC GTCCGAGGAG
GGCGGAATGC AGATGCAGGC 251 GCGCGCGGAC GGCTTTATCG CACAACATCG
CGGAGCGGGC GCGAGAATCG 301 CCGAGGCGGT ACGGGAAGCG GTATGCGGAC
ATCGGGGACG ATAGTGATAC 351 AATCCGTATC CGAGTTTTCC GGTTGGAGTA
CCGTATGAGT ATTTATGCCG 401 TCGCGCACAT CGTCCACCTG TATTGCGCCA
TCGCCTTTGT CGGCGGCGTG 451 TTTTTTGAAG TGCTGGTTTT GTCCGTCCTG
CATACGGGAC GGGTGTCGTG 501 CGAGGCGCGG CGCGAAGTGG AAAAGGCAAT
GTCTTACCGC GCCGTCAGGG 551 TGATGCCGTT TGTGGTCGGA CTGCTGTTCG
CCAGCGGCAT CGTGATGGCG 601 GCAAACCGCT ATCTTTCTAT ATTGGGCGAA
CCGTTTGCCA CTTCCTTCGG 651 TACGATGCTG ACGCTGAAAA TCCTGTTGGC
GTTCAGCGTG TTGGCGCACT 701 TCGCCATCGC CGTCGTCAAA ATGGCGCGTT
CCACACTGAC CGTCGGCTGG 751 TCGAAATACA TACACACCGT CGTCTTTACC
CATATGCTGC TGATTGTCTT 801 TTTGGCAAAA GCGATGTTTT ATATCAGCTG GTAA
This corresponds to the amino acid sequence <SEQ ID 1228; ORF
294.a>:
TABLE-US-01526 a294.pep 1 MRITCAPMSL LSAAVWSIRA VRTSSNRFPA
AFRRYSAFRP TIFPKPAGTP 51 WHRVRRFKSN RRTRGGKPLK KTYRPRRAEC
RCRRARTALS HNIAERARES 101 PRRYGKRYAD IGDDSDTIRI RVFRLEYRMS
IYAVAHIVHL YCAIAFVGGV 151 FFEVLVLSVL HTGRVSCEAR REVEKAMSYR
AVRVMPFVVG LLFASGIVMA 201 ANRYLSILGE PFATSFGTML TLKILLAFSV
LAHFAIAVVK MARSTLTVGW 251 SKYIHTVVFT HMLLIVFLAK AMFYISW* m294/a294
94.9% identity in 277 aa overlap 10 20 30 40 50 60 m294.pep
MRITCAPMSLLSAAVWSIRVVRTSSNRFPAAFRRYSAFQPTIFPKPADTPWHRVRRFKSN
|||||||||||||||||||:||||||||||||||||||:|||||||| |||||||||||| a294
MRITCAPMSLLSAAVWSIRAVRTSSNRFPAAFRRYSAFRPTIFPKPAGTPWHRVRRFKSN 10 20
30 40 50 60 70 80 90 100 110 120 m294.pep
RRMRGGKPLKKPYRPRGGGCRCRRAWTALSHNIAERARESPRRCGKRYADIGGDSDTIRI ||
|||||||| |||| : |||||| ||||||||||||||||| |||||||| ||||||| a294
RRTRGGKPLKKTYRPRRAECRCRRARTALSHNIAERARESPRRYGKRYADIGDDSDTIRI 70 80
90 100 110 120 130 140 150 160 170 180 m294.pep
RVFRLEHRMSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSREARREVEKAMSYR
||||||:||||||||||||||||||||||||||||||||||||||| ||||||||||||| a294
RVFRLEYRMSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARREVEKAMSYR 130
140 150 160 170 180 190 200 210 220 230 240 m294.pep
AVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSVLAHFAIAVVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a294
AVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSVLAHFAIAVVK 190
200 210 220 230 240 250 260 270 m294.pep
MARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISWX
|||||||||||||||:|||||||||||||||||||||| a294
MARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISWX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1229>:
TABLE-US-01527 g295.seq 1 atgctcggga tggcgcggca cgacggccag
cagggcatcg ccgcgatatt 51 gttgccacgc cgccagcagt ttttccgcct
cgtcttcgcc ccgataaacg 101 cgcgtgctgc cgcacacggc aaccggccgg
cctccgatgc gtttttcaaa 151 ctgccccgcc agcgttttca tgtcttcaga
cggcatcagg tcgtatttgg 201 tattgccgca cacctgcacg gatgccgcgc
ccaatttcgc caaccgcgcc 251 gcatccgcct ccgtctgcgc cagacagccc
gtcagcgaag cggctgcggg 301 acggatcagg cggcggactt tcagataacc
gttcagcgat ttttccgaca 351 gccgcgcatt cgccaaaaac agcggcacac
ccgctcgccg gcattccttc 401 atcagattgg gccagatttc ggtttccatc
aaaatgccga acatcgggcg 451 gtgttcgcgc aaaaactgcc gtacccacgt
ttttttgtca tacggaagat 501 agcggcattg cgcatcggga aacagaactt
gcgcggtttc ccgtcccgtc 551 ggggtcatct gcgtcatcag cagcggcgca
tcgggaaaac gccgccgcaa 601 ctcgcgtatc aagggctggg cggcacgcgt
ttctccgacc gaaacggcgt 651 gtatccaaac cgcgccggta acgggattcg
gatgcggctt gccgaaacgc 701 tcgtccctat gcgcccggta tgccggggca
cttccggagc gtttgtccaa 751 ataacgccgt atccatatcg gcgcaagcag
ccacaataca tcataaagcc 801 attggaacat ctttctattt cctgcaaaac
aaatgccgtc cgaacggttc 851 ggacggcatt tcggcaacgg aatcaaatat
cgtag
This corresponds to the amino acid sequence <SEQ ID 1230; ORF
295.ng>:
TABLE-US-01528 g295.pep 1 MLGMARHDGQ QGIAAILLPR RQQFFRLVFA
PINARAAAHG NRPASDAFFK 51 LPRQRFHVFR RHQVVFGIAA HLHGCRAQFR
QPRRIRLRLR QTARQRSGCG 101 TDQAADFQIT VQRFFRQPRI RQKQRHTRSP
AFLHQIGPDF GFHQNAEHRA 151 VFAQKLPYPR FFVIRKIAAL RIGKQNLRGF
PSRRGHLRHQ QRRIGKTPPQ 201 LAYQGLGGTR FSDRNGVYPN RAGNGIRMRL
AETLVPMRPV CRGTSGAFVQ 251 ITPYPYRRKQ PQYIIKPLEH LSISCKTNAV
RTVRTAFRQR NQIS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1231>:
TABLE-US-01529 m295.seq 1 ATGCTCGGGA TGGCGCGGCA CGACGACCAG
CAGCGCATCG CCGCGATATT 51 GTTGCCACGC CGCCAGCAGT TTTTCCGCCT
CGTCTTCACC CCGATAAACG 101 CGCGTGCTGC CGCACACGGC AACCGGCCGG
CCTCCGATGC GTTTTTCAAA 151 CTGCCCCGCC AGCGTTTTCA TCTGTTCCGA
CGGTATGATG TCGTATTTGG 201 TATTGCCGCA CACCTGCACG GATGCCGCGC
CCAATTTCGC CAACCGCGCC 251 GCATCCGCCT CTGTCTGCGC CAGACACCCC
GTCAGCGAAG CGGCGGCAGG 301 ACGGATCAGG CGGCGGACTT TCAGATAACC
GTTCAACGAT TTTTCCGACA 351 GCCGCGCATT CGCCAAAAAC AGCGGCACAC
CCGCGCGCCG GCATTCCCTC 401 ATCAGGTTGG GCCAGATTTC GGTTTCCATC
AAAATGCCGA ACATCGGGCG 451 GTGTTCGCGC AAAAACTGCC GTACCCACGT
TTTTTTGTCA TACGGAAGAT 501 AGCGGCATTG CGCATCGGGA AACAGAACTT
GCGCGGTTTC CCGCCCCGTC 551 GGGGTCATCT GCGTCATCAG CAGCGGCGCA
TCGGGAAAAC GCCGCCGCAA 601 CTCGCGTATC AAGGACTGGG CGGCACGCGT
TTCTCCGACC GAAACGGCGT 651 GTATCCAAAC CGCGCCGGTA ACGGGATTCG
GATACGGCTT GCCGAAACGC 701 TCGTCCCGAT GCGCCCGATA TGCCGGGGCA
CTTCCGGAGC GTTTGTCCAA 751 ATAACGCCGT ATCCATATCG GCGCAAGCAG
CCACAATACA TCATAAAGCC 801 ATTGGAACAT CTTTCTATTT CCTGCAAAAC
AAATGCCGTC TGAACGGTTC 851 AGACGGCATT TCGGCAACGG AATCAAATAT
CGTAG
This corresponds to the amino acid sequence <SEQ ID 1232; ORF
295>:
TABLE-US-01530 m295.pep 1 MLGMARHDDQ QRIAAILLPR RQQFFRLVFT
PINARAAAHG NRPASDAFFK 51 LPRQRFHLFR RYDVVFGIAA HLHGCRAQFR
QPRRIRLCLR QTPRQRSGGR 101 TDQAADFQIT VQRFFRQPRI RQKQRHTRAP
AFPHQVGPDF GFHQNAEHRA 151 VFAQKLPYPR FFVIRKIAAL RIGKQNLRGF
PPRRGHLRHQ QRRIGKTPPQ 201 LAYQGLGGTR FSDRNGVYPN RAGNGIRIRL
AETLVPMRPI CRGTSGAFVQ 251 ITPYPYRRKQ PQYIIKPLEH LSISCKTNAV
XTVQTAFRQR NQIS* m295/g295 93.9% identity in 294 aa overlap 10 20
30 40 50 60 m295.pep
MLGMARHDDQQRIAAILLPRRQQFFRLVFLPINARAAAHGNRPASDAFFKLPRQRFHLFR
|||||||| || |||||||||||||||||:|||||||||||||||||||||||||||:|| g295
MLGMARHDGQQGIAAILLPRRQQFFRLVFAPINARAAAHGNRPASDAFFKLPRQRFHVFR 10 20
30 40 50 60 70 80 90 100 110 120 m295.pep
RYDVVFGIAAHLHGCRAQFRQPRRIRLCLRQTPRQRSGGRTDQAADFQITVQRFFRQPRI
|::|||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| g295
RHQVVFGIAAHLHGCRAQFRQPRRIRLRLRQTARQRSGCGTDQAADFQITVQRFFRQPRI 70 80
90 100 110 120 130 140 150 160 170 180 m295.pep
RQKQRHTRAPAFPHQVGPDFGFHQNAEHRAVFAQKLPYPRFFVIRKIAALRIGKQNLRGF
||||||||:||| ||:|||||||||||||||||||||||||||||||||||||||||||| g295
RQKQRHTRSPAFLHQIGPDFGFHQNAEHRAVFAQKLPYPRFFVIRKIAALRIGKQNLRGF 130
140 150 160 170 180 190 200 210 220 230 240 m295.pep
PPRRGHLRHQQRRIGKTPPQLAYQGLGGTRFSDRNGVYPNRAGNGIRIRLAELLVPMRPI |
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||: g295
PSRRGHLRHQQRRIGKTPPQLAYQGLGGTRFSDRNGVYPNRAGNGIRMRLAELLVPMRPV 190
200 210 220 230 240 250 260 270 280 290 m295.pep
CRGTSGAFVQITPYPYRRKQPQYIIKPLEHLSISCKTNAVXTVQTAFRQRNQISX
|||||||||||||||||||||||||||||||||||||||| ||:|||||||||| g295
CRGTSGAFVQITPYPYRRKQPQYIIKPLEHLSISCKTNAVRTVRTAFRQRNQIS 250 260 270
280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1233>:
TABLE-US-01531 a295.seq 1 ATGCTCGGGA TGGCGCGGCA CGACGACCAG
CAGGGCATCG CCGCGATATT 51 GTTGCCACGC CGCCAGCAGT TTTTCCGCCT
CGTCTTCACC CCGATAAACG 101 CGCGTGCTGC CGCACACGGC AACCTGCCGG
TCTCCGATGC GTTTTTCAAA 151 CTGCCCCGCC AGCGTTTTCA TCTGTTCCGA
CGGCATCAGG TCGTATTTGG 201 TATTGCCGCA CACCTGCACG GATGCCGCGC
CCAATTTCGC CAACCGCGCC 251 GCATCCGCCT CCGTCTGTGC CAGACAGCCC
GTCAGCGAAG CGGCGGCAGG 301 ACGGATCAGG CTGCGGACTT TCAGATAACC
GTTTAGCGAT TTTTCCGACA 351 GCCGCGCATT CGCCAAAAAC AGCGGCACAC
CCGTGCGCCG GCATTCCTTC 401 ATCAGATTGG GCCAGATTTC GGTTTCCATC
AAAATGCCGA ACATCGGGCG 451 GTGTTCGCGC AAAAACTGCC GTACCCACGT
TTTTTTGTCA TACGGAAGAT 501 AGCGGCATTG TGCATCAGGA AACAGAACTT
GCGCGGTTTC CCGTCCCGTC 551 GGGGTCATCT GCGTCATCAG CAGCGGCGCA
TCGGGAAAAC GCTGCCGCAA 601 CTCGCGTATC AAAGGTTGGG CGGCACGCGT
TTCCCCGACC GAAACGGCGT 651 GTATCCAAAC CGCGCCGGTA ACGGGATTCG
GATACGGCTT GCCGAAACGC 701 TCGCCCCGAT GCGCCCGATA TGCAGGGGCA
CTTCCGGAGC GTTTGTCCAA 751 ATAACGCCGT ATCCATATCG GCGCAAGCAG
CCACAATACA TCATAAAGCC 801 ATTGGAACAT CTTTCTATTT CCTGCAAAAC
AAATGCCGTC CGAACGGTTC 851 GGACGGCATT TCGGCAACGG AATCAAATAT
CGTAG
This corresponds to the amino acid sequence <SEQ ID 1234; ORF
295.a>:
TABLE-US-01532 a295.pep 1 MLGMARHDDQ QGIAAILLPR RQQFFRLVFT
PINARAAAHG NLPVSDAFFK 51 LPRQRFHLFR RHQVVFGIAA HLHGCRAQFR
QPRRIRLRLC QTARQRSGGR 101 TDQAADFQIT V*RFFRQPRI RQKQRHTRAP
AFLHQIGPDF GFHQNAEHRA 151 VFAQKLPYPR FFVIRKIAAL CIRKQNLRGF
PSRRGHLRHQ QRRIGKTLPQ 201 LAYQRLGGTR FPDRNGVYPN RAGNGIRIRL
AETLAPMRPI CRGTSGAFVQ 251 ITPYPYRRKQ PQYIIKPLEH LSISCKTNAV
RTVRTAFRQR NQIS* m295/a295 93.2% identity in 294 aa overlap 10 20
30 40 50 60 m295.pep
MLGMARHDDQQRIAAILLPRRQQFFRLVFTPINARAAAHGNRPASDAFFKLPRQRFHLFR
||||||||||| ||||||||||||||||||||||||||||| |:|||||||||||||||| a295
MLGMARHDDQQGIAAILLPRRQQFFRLVFTPINARAAAHGNLPVSDAFFKLPRQRFHLFR 10 20
30 40 50 60 70 80 90 100 110 120 m295.pep
RYDVVFGIAAHLHGCRAQFRQPRRIRLCLRQTPRQRSGGRTDQAADFQITVQRFFRQPRI
|::|||||||||||||||||||||||| | || |||||||||||||||||| |||||||| a295
RHQVVFGIAAHLHGCRAQFRQPRRIRLRLCQTARQRSGGRTDQAADFQITVXRFFRQPRI 70 80
90 100 110 120 130 140 150 160 170 180 m295.pep
RQKQRHTRAPAFPHQVGPDFGFHQNAEHRAVFAQKLPYPRFFVIRKIAALRIGKQNLRGF
|||||||||||| ||:|||||||||||||||||||||||||||||||||| | ||||||| a295
RQKQRHTRAPAFLHQIGPDFGFHQNAEHRAVFAQKLPYPRFFVIRKIAALCIRKQNLRGF 130
140 150 160 170 180 190 200 210 220 230 240 m295.pep
PPRRGHLRHQQRRIGKTPPQLAYQGLGGTRFSDRNGVYPNRAGNGIRIRLAETLVPMRPI |
||||||||||||||| |||||| |||||| ||||||||||||||||||||||:||||| a295
PSRRGHLRHQQRRIGKTLPQLAYQRLGGTRFPDRNGVYPNRAGNGIRIRLAETLAPMRPI 190
200 210 220 230 240 250 260 270 280 290 m295.pep
CRGTSGAFVQITPYPYRRKQPQYIIKPLEHLSISCKTNAVXTVQTAFRQRNQISX
|||||||||||||||||||||||||||||||||||||||| ||:||||||||||| a295
CRGTSGAFVQITPYPYRRKQPQYIIKPLEHLSISCKTNAVRTVRTAFRQRNQISX 250 260 270
280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1235>:
TABLE-US-01533 g297.seq 1 ATGGCTGTCT TCCCACTTTC GGCAAAACAT
CGGAAATACG CGCTGCGCGC 51 GCTTGCCGTT TCGATTATTC TGGTGtcgGC
GGCATACATT GCttcgacag 101 aggggaccga gcgcgtcaga ccgcAGCGCG
TggaacaaAA ACTGCCGCCG 151 CTGTCtTGGg gcggcaacgg CGTtcagacg
gcaTATTGGG TGCAGGAGGC 201 GGTGCagccg ggggactcgC TGGCGGACGT
GCTGGCGCGT TCGGGTATGG 251 CGCGGGacga gattgCCcga ATcacGGAAA
aataTggcgG CGAAGCCGAT 301 TTGCGgcatt tGCGTGCCGA CCAGTCGGTT
CATGTTTTGG TCGGCGGCGA 351 CGGCAGTGCG CGCGAAGTGC AGTTTTttaC
CGACGAAGAC GGCGAGCGCA 401 aTctGGTCGC TTTGGAAAAA AAAGGCGGCA
TATGGCGGCG GTCGGCTTCT 451 GATGCGGATA TGAAGGTTTT GCCGACACTG
CGTTCGGTCG TGGTCAAAAC 501 GTCGGCGCGC GGTTCGCTGG CGCGGGCGGA
AGTGCCCGTC GAAATCCGCG 551 AATCCTTAAG CGGGATTTTT GCCGGCCGCT
TCAGCCTTGA CGGTTTGAAG 601 GAAGGCGATG CCGTGCGCCT GCTTTACGAC
AGCCTGTATT TCCACGGGCA 651 GCAGGTGGCG GCGGGCGATA TTTTGGCGGC
GGAAGTTGTC AAGGGCGGCA 701 CAACCCATCA GGCGTTCTAT TACCGTTCGG
ACAAGGAAGG CGGAGGGGGC 751 GGCAATTATT ACGATGAAGA CGGCAGGGTG
TTGCAGGAAA AAGGCGGCTT 801 CAACATCgaG CCGCTGGTCT ATACGCGCAT
TTCTTCGCCG TTCGGCTACC 851 GTATGCACCC CATCCTGCAC ACATGGCGGC
TGCACACGGG CATCGATTAT 901 GCCGCACCGC AGGGAACGCC GGTCAGGGCT
TCCGCCGACG GCGTGATTAC 951 CTTTAAAGGC CGGAAGGGCG GATACGGCAA
CGCGGTGATG ATACGCCACG 1001 CCAACGGTGT GGAAACGCTG TACGCGCACT
TGAGCGCGTT TTCGCAGGCA 1051 CAAGGCAATG TGCGCGGCGG CGAGGTCATC
GGTTTTGTCG GTTCGACAGG 1101 GCGTTCGACC GGGCCGCACC TGCATTACGA
GGCGCGCATC AACGGGCAGC 1151 CCGTCAATCC TGTTTCGGTC GCATTGCCGA
CACCCGAATT GACGCAGGCG 1201 GACAAGGCGG CGTTTGCCGC GCAGAAACAG
AAGGCGGACG CGCTGCTTGC 1251 GCGCTTGCGC GGCATACCGG TTACCGTGTC
GCAATCGGAT TGA
This corresponds to the amino acid sequence <SEQ ID 1236; ORF
297.ng>:
TABLE-US-01534 g297.pep 1 MAVFPLSAKH RKYALRALAV SIILVSAAYI
ASTEGTERVR PQRVEQKLPP 51 LSWGGNGVQT AYWVQEAVQP GDSLADVLAR
SGMARDEIAR ITEKYGGEAD 101 LRHLRADQSV HVLVGGDGSA REVQFFTDED
GERNLVALEK KGGIWRRSAS 151 DADMKVLPTL RSVVVKTSAR GSLARAEVPV
EIRESLSGIF AGRFSLDGLK 201 EGDAVRLLYD SLYFHGQQVA AGDILAAEVV
KGGTTHQAFY YRSDKEGGGG 251 GNYYDEDGRV LQEKGGFNIE PLVYTRISSP
FGYRMHPILH TWRLHTGIDY 301 AAPQGTPVRA SADGVITFKG RKGGYGNAVM
IRHANGVETL YAHLSAFSQA 351 QGNVRGGEVI GFVGSTGRST GPHLHYEARI
NGQPVNPVSV ALPTPELTQA 401 DKAAFAAQKQ KADALLARLR GIPVTVSQSD *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1237>:
TABLE-US-01535 m297.seq 1 ATGGCTGTCT TCCCACTTTC GGCAAAACAT
CGGAAATACG CGCTGCGTGC 51 GCTTGCCGTT TCGATTATTT TGGTGTCGGC
GGCATACATT GCTTCGACAG 101 AGAGGACGGA GCGCGTCAGA CCGCAGCGCG
TGGAACAAAA TCTGCCGCCG 151 CTGTCTTGGG GCGGCAGCGG CGTTCAGACG
GCATATTGGG TGCAGGAGGC 201 GGTGCAGCCG GGCGACTCGC TGGCGGACGT
GCTGGCGCGT TCGGGTATGG 251 CGCGGGACGA GATTGCCCGA ATCACGGAAA
AATATGGCGG CGAAGCCGAT 301 TTGCGGCATT TGCGTGCCGA CCAGTCGGTT
CATGTTTTGG TCGGCGGCGA 351 CGGCGGCGCG CGCGAAGTGC AGTTTTTTAC
CGACGAAGAC GGCGAGCGCA 401 ATCTGGTCGC TTTGGAAAAG AAAGGCGGCA
TATGGCGGCG GTCGGCTTCT 451 GAGGCGGATA TGAAGGTTTT GCCGACGCTG
CGTTCGGTCG TGGTCAAAAC 501 GTCGGCGCGC GGTTCGCTGG CGCGGGCGGA
AGTGCCCGTC GAAATCCGCG 551 AATCCTTAAG CGGGATTTTC GCCGGCCGCT
TCAGCCTTGA CGGTTTGAAG 601 GAAGGCGATG CCGTGCGCCT GATGTACGAC
AGCCTGTATT TCCACGGGCA 651 GCAGGTGGCG GCGGGCGATA TTTTGGCGGC
TGAAGTCGTT AAGGGCGGCA 701 CAAGGCATCA GGCGTTCTAT TACCGTTCGG
ACAAGGAAGG CGGAGGGGGC 751 GGCAATTATT ATGATGAAGA CGGCAAGGTG
TTGCAGGAAA AAGGCGGCTT 801 CAACATCGAG CCGCTGGTCT ATACGCGCAT
TTCTTCGCCG TTCGGCTACC 851 GTATGCACCC CATCCTGCAC ACATGGCGGC
TGCACACGGG CATCGATTAT 901 GCCGCACCGC AGGGAACGCC GGTCAGGGCT
TCCGCCGACG GCGTGATTAC 951 CTTTAAAGGC CGGAAGGGCG GATACGGCAA
CGCGGTGATG ATACGCCACG 1001 CCAACGGTGT GGAAACGCTG TACGCGCACT
TGAGCGCGTT TTCGCAGGCG 1051 GAAGGCAATG TGCGCGGCGG CGAGGTCATC
GGTTTTGTCG GTTCGACCGG 1101 GCGTTCGACC GGGCCGCACC TGCATTACGA
GGCGCGCATC AACGGGCAGC 1151 CCGTCAATCC TGTTTCGGTC GCATTGCCGA
CACCGGAATT GACGCAGGCG 1201 GACAAGGCGG CGTTTGCCGC GCAGAAACAG
AAGGCGGACG CGCTGCTTGC 1251 GCGCTTGCGC GGCATACCGG TTACCGTGTC
GCAATCGGAT TGA
This corresponds to the amino acid sequence <SEQ ID 1238; ORF
297>:
TABLE-US-01536 m297.pep 1 MAVFPLSAKH RKYALRALAV SIILVSAAYI
ASTERTERVR PQRVEQNLPP 51 LSWGGSGVQT AYWVQEAVQP GDSLADVLAR
SGMARDEIAR ITEKYGGEAD 101 LRHLRADQSV HVLVGGDGGA REVQFFTDED
GERNLVALEK KGGIWRRSAS 151 EADMKVLPTL RSVVVKTSAR GSLARAEVPV
EIRESLSGIF AGRFSLDGLK 201 EGDAVRLMYD SLYFHGQQVA AGDILAAEVV
KGGTRHQAFY YRSDKEGGGG 251 GNYYDEDGKV LQEKGGFNIE PLVYTRISSP
FGYRMHPILH TWRLHTGIDY 301 AAPQGTPVRA SADGVITFKG RKGGYGNAVM
IRHANGVETL YAHLSAFSQA 351 EGNVRGGEVI GFVGSTGRST GPHLHYEARI
NGQPVNPVSV ALPTPELTQA 401 DKAAFAAQKQ KADALLARLR GIPVTVSQSD *
m297/g297 97.9% identity in 430 aa overlap 10 20 30 40 50 60
m297.pep
MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRVEQNLPPLSWGGSGVQT
|||||||||||||||||||||||||||||||||| |||||||||||:||||||||:|||| g297
MAVFPLSAKHRKYALRALAVSIILVSAAYIASTEGTERVRPQRVEQKLPPLSWGGNGVQT 10 20
30 40 50 60 70 80 90 100 110 120 m297.pep
AYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLRHLRADQSVHVLVGGDGGA
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| g297
AYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLRHLRADQSVHVLVGGDGSA 70 80
90 100 110 120 130 140 150 160 170 180 m297.pep
REVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPV
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||| g297
REVQFFTDEDGERNLVALEKKGGIWRRSASDADMKVLPTLRSVVVKTSARGSLARAEVPV 130
140 150 160 170 180 190 200 210 220 230 240 m297.pep
EIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFY
|||||||||||||||||||||||||||:|||||||||||||||||||||||||| ||||| g297
EIRESLSGIFAGRFSLDGLKEGDAVRLLYDSLYFHGQQVAAGDILAAEVVKGGLTHQAFY 190
200 210 220 230 240 250 260 270 280 290 300 m297.pep
YRSDKEGGGGGNYYDEDGKVLQEKGGFNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDY
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| g297
YRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDY 250
260 270 280 290 300 310 320 330 340 350 360 m297.pep
AAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQAEGNVRGGEVI
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g297
AAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQAQGNVRGGEVI 310
320 330 340 350 360 370 380 390 400 410 420 m297.pep
GFVGSTGRSTGPHLHYEARINGQPVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g297
GFVGSTGRSTGPHLHYEARINGQPVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR 370
380 390 400 410 420 430 m297.pep GIPVTVSQSDX ||||||||||| g297
GIPVTVSQSDX 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1239>:
TABLE-US-01537 a297.seq 1 ATGGCTGTCT TCCCACTTTC GGCAAAACAT
CGGAAATACG CGCTGCGCGC 51 GCTTGCCGTT TCGATTATTT TGGTGTCGGC
GGCATACATT GCTTCGACAG 101 AGAGGACGGA GCGCGTCAGA CCGCAGCGCG
TGGAACAAAA ACTGCCGCCG 151 CTGTCTTGGG GCGGCAGCGG TGTTCAGACG
GCATATTGGG TGCAGGAGGC 201 GGTGCAGCCA GGCGACTCGC TGGCGGACGT
GCTGGCGCGT TCGGGTATGG 251 CGCGGGACGA AATTGCCCGA ATAACGGAAA
AATATGGCGG CGAAGCCGAT 301 TTGCGGCATT TGCGTGCCGA CCAGTCGGTT
CATGTTTTGG TCGGCGGCGA 351 CGGCGGCGCG CGCGAAGTGC AGTTTTTTAC
CGACGAAGAC GGCGAGCGCA 401 ATCTGGTCGC TTTGGAAAAA AAAGGCGGCA
TATGGCGGCG GTCGGCTTCT 451 GAGGCGGATA TGAAGGTTTT GCCGACGCTG
CGTTCGGTCG TGGTCAAAAC 501 GTCGGCGCGC GGTTCGCTGG CGCGGGCGGA
AGTGCCCGTC GAAATTCGCG 551 AATCCTTAAG CGGGATTTTC GCCGGCCGCT
TCAGCCTTGA TGGTTTGAAG 601 GAAGGCGATG CCGTGCGCCT GATTTACGAC
AGCCTGTATT TCCACGGGCA 651 GCAGGTGGCG GCGGGCGATA TTCTGGCGGC
GGAAGTCGTT AAGGGCGGCA 701 CAAGGCATCA GGCGTTCTAT TACCGTTCGG
ACAAGGAAGG AGGAGGGGGC 751 GGCAATTATT ACGATGAAGA CGGCAGGGTG
TTGCAGGAAA AAGGCGGCTT 801 CAACATCGAG CCACTGGTCT ATACGCGCAT
TTCTTCGCCG TTCGGCTACC 851 GTATGCACCC CATCCTGCAC ACTTGGCGGC
TGCACACGGG CATCGATTAT 901 GCCGCACCGC AGGGAACGCC GGTCAGGGCT
TCCGCCGACG GCGTGATTAC 951 CTTTAAAGGC CGGAAGGGTG GCTACGGCAA
CGCGGTGATG ATACGCCACG 1001 CCAACGGTGT GGAAACGCTG TATGCGCACT
TGAGCGCGTT TTCTCAGGCA 1051 GAAGGCAATG TGCGCGGCGG CGAGGTCATC
GGTTTTGTCG GTTCGACCGG 1101 GCGTTCGACG GGGCCGCACC TGCATTACGA
GGCGCGCATC AATGGGCAGC 1151 CCGTCAATCC TGTTTCGGTC GCATTGCCGA
CACCCGAATT GACGCAGGCG 1201 GACAAGGCGG CGTTTGCCGC GCAGAAACAG
AAGGCGGACG CGCTGCTTGC 1251 GCGCTTGCGC GGCATACCGG TTACCGTGTC
GCAATCGGAT TGA
This corresponds to the amino acid sequence <SEQ ID 1240; ORF
297.a>:
TABLE-US-01538 a297.pep 1 MAVFPLSAKH RKYALRALAV SIILVSAAYI
ASTERTERVR PQRVEQKLPP 51 LSWGGSGVQT AYWVQEAVQP GDSLADVLAR
SGMARDEIAR ITEKYGGEAD 101 LRHLRADQSV HVLVGGDGGA REVQFFTDED
GERNLVALEK KGGIWRRSAS 151 EADMKVLPTL RSVVVKTSAR GSLARAEVPV
EIRESLSGIF AGRFSLDGLK 201 EGDAVRLIYD SLYFHGQQVA AGDILAAEVV
KGGTRHQAFY YRSDKEGGGG 251 GNYYDEDGRV LQEKGGFNIE PLVYTRISSP
FGYRMHPILH TWRLHTGIDY 301 AAPQGTPVRA SADGVITFKG RKGGYGNAVM
IRHANGVETL YAHLSAFSQA 351 EGNVRGGEVI GFVGSTGRST GPHLHYEARI
NGQPVNPVSV ALPTPELTQA 401 DKAAFAAQKQ KADALLARLR GIPVTVSQSD *
m297/a297 99.3% identity in 430 aa overlap 10 20 30 40 50 60
m297.pep
MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRVEQNLPPLSWGGSGVQT
||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| a297
MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRVEQKLPPLSWGGSGVQT 10 20
30 40 50 60 70 80 90 100 110 120 m297.pep
AYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLRHLRADQSVHVLVGGDGGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a297
AYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLRHLRADQSVHVLVGGDGGA 70 80
90 100 110 120 130 140 150 160 170 180 m297.pep
REVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a297
REVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPV 130
140 150 160 170 180 190 200 210 220 230 240 m297.pep
EIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFY
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a297
EIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFY 190
200 210 220 230 240 250 260 270 280 290 300 m297.pep
YRSDKEGGGGGNYYDEDGKVLQEKGGFNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDY
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| a297
YRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTRISSPFGYRMHPILHTWRLHTGIDY 250
260 270 280 290 300 310 320 330 340 350 360 m297.pep
AAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQAEGNVRGGEVI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a297
AAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQAEGNVRGGEVI 310
320 330 340 350 360 370 380 390 400 410 420 m297.pep
GFVGSTGRSTGPHLHYEARINGQPVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a297
GFVGSTGRSTGPHLHYEARINGQPVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR 370
380 390 400 410 420 430 m297.pep GIPVTVSQSDX ||||||||||| a297
GIPVTVSQSDX 430
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1241>:
TABLE-US-01539 g298.seq 1 ATGAAAAACT TTCTTTCCCT TTTCGCCTCC
ATACTGATGT CTGCCCTGAT 51 TGCCGTGTGG TTCAGCCAAA ACCCCATCAA
CGCCTACTGG CAGCAGACCT 101 ACCACCGCAA CAGCCCGCTC GAACCGCTTG
CCGCCTACGG ATGGTGGCGG 151 AGCGGAGCGG CGTTGCAAGA AAACGCCTAC
GCCCTTTCAG ACGGCATCAA 201 AACCTTCCTG TCCGGCGAAA cgccccccac
ggCTCAAGAC GGCGGTTCGG 251 CAGATATGCC GCCTGAAGCC GCCGCATCCG
AAGCCGCCCC GCCGGCCGGC 301 GGAACAGAAT GGAAACAAGG CACCGAAGCC
GCCGCCGTCC GCAGCGGCGA 351 CAAAGTCTTT TTCGCCGGAG ATTCGCTGAT
GCAGGGCGTT GCGCCTTTCG 401 TGCAAAAAAG CCTGAAACAG CAATACGGCA
TCGAATCCGC CAACCTCAGC 451 AAACAAAGCA CGGGGCTTTC CTATCCCTCA
TTCTTCGACT GGCCGAAAAC 501 GATTGAAGAA ACCTTGAAAA AACATCCCGA
AATCAGCGTA CTCGCCGTCT 551 TCCTCGGCCC GAACGACCCG TGGGATTTCC
CCGTCGGCAA ACGCTACCTC 601 AAATTCGCTT CCGACGAATG GGCGCAAGAA
TACCTGAAAC GCGTCGACCG 651 CATCCTTGAA GCCGCACACA CGCACCGCGT
CCAAGTCGTC TGGCTCGGCA 701 TCCCCTACAT GAAAAAAGTC AAGCTCGACG
GTCAGATGCG CTACCTCGAC 751 AAACTGCTTT CGGAACACTT GAAAGGCAAA
ATCATCCTGA TTCCCACCGC 801 GCAAACACTG AGCGGCGGGA AAGgccGCTA
CACCGATTCC GTCAACGTCA 851 ACGGCAAACC CGTCCGCTAC CGCAGTAAGG
ACGGCATACA CTTTACCGCC 901 GAAGGACAAA AACTGCTGGC GGAAAAAATA
ATGGAAAAAA TCGTTTTTGA 951 ACCGAGTACG CAACCATCAA GTACACAGCC ATGA
This corresponds to the amino acid sequence <SEQ ID 1242; ORF
298.ng>:
TABLE-US-01540 g298.pep 1 MKNFLSLFAS ILMSALIAVW FSQNPINAYW
QQTYHRNSPL EPLAAYGWWR 51 SGAALQENAY ALSDGIKTFL SGETPPTAQD
GGSADMPPEA AASEAAPPAG 101 GTEWKQGTEA AAVRSGDKVF FAGDSLMQGV
APFVQKSLKQ QYGIESANLS 151 KQSTGLSYPS FFDWPKTIEE TLKKHPEISV
LAVFLGPNDP WDFPVGKRYL 201 KFASDEWAQE YLKRVDRILE AAHTHRVQVV
WLGIPYMKKV KLDGQMRYLD 251 KLLSEHLKGK IILIPTAQTL SGGKGRYTDS
VNVNGKPVRY RSKDGIHFTA 301 EGQKLLAEKI MEKIVFEPST QPSSTQP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1243>:
TABLE-US-01541 m298.seq 1 ATGAAAAACT TTCTTTCCCT TTTCTCCTCC
ATACTGATGT CTGCCCTGAT 51 TGCCGTGTGG TTCAGCCAAA ACCCCATCAA
CGCCTACTGG CAGCAGACCT 101 ACCACCGCAA CAGCCCGCTC GAACCGCTTG
CCGCCTACGG ATGGTGGCGG 151 AGCGGTGCGG CGTTGCAAGA AAACGCCTAC
GCCCTTTCAG ACGGCATCAA 201 AGCCTTCCTG TCCGGCGAAA CGCCGCCGAC
GGCTCAAGAC GGCGGTTCGG 251 CAGATATGCC GTCTGAAGCC GCCGCATCCG
AAGCCGTCCC TCAAACCGGT 301 GAAACAGAAT GGAAACAAGA CACCGAAGCC
GCCGCCGTCC GCAGCGGCGA 351 CAAAGTCTTT TTTGTCGGCG ACTCGCTGAT
GCAGGGCGTT GCCCCCTTCG 401 TGCAAAAAAG CCTGAAACAG CAATACGGCA
TCGAATCCGT CAACCTCAGC 451 AAACAAAGCA CGGGGCTGTC CTACCCCTCA
TTCTTCGACT GGCCGAAAAC 501 GATTGAAGAA ACCCTGCAAA AACATCCCGA
AATCAGCGTA CTCGCCGTCT 551 TCCTCGGACC GAACGACCCG TGGGATTTCC
CCGTCGGCAA ACTCTATCTC 601 AAATTCGCTT CCGACGAATG GGCGCAAGAA
TACCTGAAAC GTGTCGACCG 651 CATCCTTGAA GCCGCACACA CGCACCGCGT
CCAAGTCGTC TGGCTCGGCA 701 TCCCCTACAT GAAAAAAGCC AAGCTCGACG
GACAGATGCG CTACCTAGAC 751 AAACTGCTTT CGGAACATTT GAAAGGCAAA
ATCATCCTGA TTCCCACCAC 801 GCACACCCTG AGCGGCGGGA AAGACCGCTA
CACCGACTCC GTCAACGTCA 851 ACGGCAAACC CGTCCGCTAC CGCAGCAAGG
ACGGCATACA CTTTACCGCC 901 GAAGGACAAA AACTGCTGGC GGCAAAAATA
ATGGAAAAAA TCGTTTTTGA 951 ACCAAGTACG CAACCATCAA GTACACAGCC ATGA
This corresponds to the amino acid sequence <SEQ ID 1244; ORF
298>:
TABLE-US-01542 m298.pep 1 MKNFLSLFSS ILMSALIAVW FSQNPINAYW
QQTYHRNSPL EPLAAYGWWR 51 SGAALQENAY ALSDGIKAFL SGETPPTAQD
GGSADMPSEA AASEAVPQTG 101 ETEWKQDTEA AAVRSGDKVF FVGDSLMQGV
APFVQKSLKQ QYGIESVNLS 151 KQSTGLSYPS FFDWPKTIEE TLQKHPEISV
LAVFLGPNDP WDFPVGKLYL 201 KFASDEWAQE YLKRVDRILE AAHTHRVQVV
WLGIPYMKKA KLDGQMRYLD 251 KLLSEHLKGK IILIPTTHTL SGGKDRYTDS
VNVNGKPVRY RSKDGIHFTA 301 EGQKLLAAKI MEKIVFEPST QPSSTQP* m298/g298
94.8% identity in 327 aa overlap 10 20 30 40 50 60 m298.pep
MKNFLSLFSSILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLAAYGWWRSGAALQENAY
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| g298
MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLAAYGWWRSGAALQENAY 10 20
30 40 50 60 70 80 90 100 110 120 m298.pep
ALSDGIKAFLSGETPPLAQDGGSADMPSEAAASEAVPQTGETEWKQDTEAAAVRSGDKVF
|||||||:||||||||||||||||||| |||||||:| :| ||||| ||||||||||||| g298
ALSDGIKTFLSGETPPLAQDGGSADMPPEAAASEAAPPAGGTEWKQGTEAAAVRSGDKVF 70 80
90 100 110 120 130 140 150 160 170 180 m298.pep
FVGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPSFFDWPKTIEETLQKHPEISV
|:||||||||||||||||||||||||:|||||||||||||||||||||||||:||||||| g298
FAGDSLMQGVAPFVQKSLKQQYGIESANLSKQSTGLSYPSFFDWPKTIEETLKKHPEISV 130
140 150 160 170 180 190 200 210 220 230 240 m298.pep
LAVFLGPNDPWDFPVGKLYLKFASDEWAQEYLKRVDRILEAAHTHRVQVVWLGIPYMKKA
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||: g298
LAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRILEAAHTHRVQVVWLGIPYMKKV 190
200 210 220 230 240 250 260 270 280 290 300 m298.pep
KLDGQMRYLDKLLSEHLKGKIILIPTTHTLSGGKDRYTDSVNVNGKPVRYRSKDGIHFTA
||||||||||||||||||||||||||::|||||| ||||||||||||||||||||||||| g298
KLDGQMRYLDKLLSEHLKGKIILIPTAQTLSGGKGRYTDSVNVNGKPVRYRSKDGIHFTA 250
260 270 280 290 300 310 320 m298.pep EGQKLLAAKIMEKIVFEPSTQPSSTQPX
||||||| |||||||||||||||||||| g298 EGQKLLAEKIMEKIVFEPSTQPSSTQPX 310
320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1245>:
TABLE-US-01543 a298.seq 1 ATGAAAAACT TTCTTTCCCT TTTCGCCTCC
ATACTGATGT CTGCCCTGAT 51 TGCCGTGTGG TTCAGCCAAA ACCCCATCAA
CGCCTACTGG CAGCAGACCT 101 ACCACCGCAA CAGCCCGCTC GAACCGCTTG
CCGCCTACGG ATGGTGGCGG 151 AGCGGTGCGG CATTGCAAGA AAACGCCTAC
GCCCTTTCAG ACGGCATCAA 201 AGCCTTCCTG TCCGGCGAAA CGCCGCCGAC
GGCTCAAGAC GGCGGTTCGG 251 CAGATATGCC GTCTGAAGCC GCCGCACCCG
AAACCGCCCC TCAAACTGGC 301 GAAACAGAAT GGAAACAAAA CACCGAAGCC
GCCGCCGTCC GAACAGGGGA 351 CAAAGTCTTT TTCGCCGGCG ACTCGCTGAT
GCAGGGCGTT GCACCCTTCG 401 TGCAAAAAAG CCTGAAACAG CAATACGGCA
TCGAATCCGT CAACCTCAGC 451 AAACAAAGCA CGGGGCTGTC CTACCCCTCA
TTCTTCGACT GGCCGAAAAC 501 GATTGAAGAA ACCCTGAAAA AACATCCCGA
AATCAGCGTG CTCGCCGTCT 551 TCCTCGGTCC GAACGACCCG TGGGATTTCC
CCGTTGGCAA ACGCTACCTC 601 AAATTCGCTT CCGACGAATG GGCGCAAGAA
TACCTGAAAC GCGTCGACCG 651 CATCCTTGAA GCCGCACACA CGCACTACGT
CCAAGTCGTC TGGCTCGGCA 701 TCCCCTACAT GAAAAAAGCC AAGCTCGACG
GACAGATGCG CTACCTAGAC 751 AAACTGCTTT CGGAATATTT GAAAGGCAAA
ATCATCCTGA TTCCCACCGC 801 GCACACCCTG AGCGGCGGGA AAGACCGCTA
CACCGACTCC GTCAACGTCA 851 ACGGCAAACC CGTCCGCTAC CGCAGCAAGG
ACGGCATACA CTTTACCGCC 901 GAAGGACAAA AACTGCTGGC GGCAAAAATA
ATGGAAAAAA TCGTTTTTGA 951 ACCAAGTACG CAACCATCAA GTACACAGCC ATGA
This corresponds to the amino acid sequence <SEQ ID 1246; ORF
298.a>:
TABLE-US-01544 a298.pep 1 MKNFLSLFAS ILMSALIAVW FSQNPINAYW
QQTYHRNSPL EPLAAYGWWR 51 SGAALQENAY ALSDGIKAFL SGETPPTAQD
GGSADMPSEA AAPETAPQTG 101 ETEWKQNTEA AAVRTGDKVF FAGDSLMQGV
APFVQKSLKQ QYGIESVNLS 151 KQSTGLSYPS FFDWPKTIEE TLKKHPEISV
LAVFLGPNDP WDFPVGKRYL 201 KFASDEWAQE YLKRVDRILE AAHTHYVQVV
WLGIPYMKKA KLDGQMRYLD 251 KLLSEYLKGK IILIPTAHTL SGGKDRYTDS
VNVNGKPVRY RSKDGIHFTA 301 EGQKLLAAKI MEKIVFEPST QPSSTQP* m298/a298
96.3% identity in 327 aa overlap 10 20 30 40 50 60 m298.pep
MKNFLSLFSSILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLAAYGWWRSGAALQENAY
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| a298
MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLAAYGWWRSGAALQENAY 10 20
30 40 50 60 70 80 90 100 110 120 m298.pep
ALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGETEWKQDTEAAAVRSGDKVF
|||||||||||||||||||||||||||||||| |::||||||||||:|||||||:||||| a298
ALSDGIKAFLSGETPPTAQDGGSADMPSEAAAPETAPQTGETEWKQNTEAAAVRTGDKVF 70 80
90 100 110 120 130 140 150 160 170 180 m298.pep
FVGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPSFFDWPKTIEETLQKHPEISV
|:||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| a298
FAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPSFFDWPKTIEETLKKHPEISV 130
140 150 160 170 180 190 200 210 220 230 240 m298.pep
LAVFLGPNDPWDFPVGKLYLKFASDEWAQEYLKRVDRILEAAHTHRVQVVWLGIPYMKKA
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| a298
LAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRILEAAHTHYVQVVWLGIPYMKKA 190
200 210 220 230 240 250 260 270 280 290 300 m298.pep
KLDGQMRYLDKLLSEHLKGKIILIPTTHTLSGGKDRYTDSVNVNGKPVRYRSKDGIHFTA
|||||||||||||||:||||||||||:||||||||||||||||||||||||||||||||| a298
KLDGQMRYLDKLLSEYLKGKIILIPTAHTLSGGKDRYTDSVNVNGKPVRYRSKDGIHFTA 250
260 270 280 290 300 310 320 m298.pep EGQKLLAAKIMEKIVFEPSTQPSSTQPX
|||||||||||||||||||||||||||| a298 EGQKLLAAKIMEKIVFEPSTQPSSTQPX 310
320
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1247>:
TABLE-US-01545 g299.seq 1 ATGAACCCCA AACACTTCAT CGCATTTTCC
GCCCTGTTCG CCGCCACGCA 51 GGCAGAAGCC CTGCCCGTCG CCTCCGTCAG
CCCCGACACC GTTACCGTTT 101 CCCCGTCCGC CCCCTACACC GATACAAACG
GGCTGCTGAC CGACTACGGC 151 AACGCCGCCG CCTCGCCTTG GATGAAAAAA
CTCCGATCCG TCGCACAAGG 201 CAGCGGCGAG GCCTTCCGCA TCCTGCAAAT
CGGCGACTCG CATACCGCCG 251 GCGACTTCTT TACCGACGCC CTGCGCAAAC
GCCTGCAAAA AACATGGGGC 301 GACGGCGGCA TAGGCTGGGT TTACCCCGCC
AACGTCAAAG GGCAGCGCAT 351 GGCGGCCGTC CGTCACAGCG GCAACTGGCA
AAGCTTCACC AGCAGGAACA 401 ATACCGGAGA TTTCCCGCTC GGCGGCATCC
TCGCCCAAAC CGGCAGCGGC 451 GGCGGCATGA CCCTGACCGC GTCTGACGGC
AAAACCGGCA AACAGCGCGT 501 TTCCCTGTTT GCCAAACCGC TGCTCGCCGA
ACAAACCCTG ACCGTCAACG 551 GCAACACCGT CTCCGCCAAC GGCGGCGGCT
GGCAGGTACT GGATACGGGC 601 GCGGCACTGC CCCTGGCCAT ACAGACCGAA
ATGCCGTGGG ACATCGGCTT 651 CATCAACATC GAAAATCCCG CCGGCGGCAT
TACCGTTTCC GCGATGGGCA 701 TCAACGGCGC ACAATTGACC CAGTGGTCGA
AATGGCGTGC CGACCGTATG 751 AACGACCTTG CCCAAACCGG CGCCGATTTG
GTTATCCTTT CCTACGGCAC 801 CAACGAAGCC TTCAACAACA ACATCGACAT
TGCCGATACC GAACAAAAAT 851 GGCTGGATAC CGTCCGCCAA ATCCGCGACA
GCCTGCCCGC CGCCGGCATC 901 CTCATCATCG GCGCGCCCGA ATCCCTGAAA
AACACGCTCG GCGTATGCGG 951 CACGCGCCCC GTCCTCCTGA CCGAAGTCCA
ACAGATGCAG CGGCGCGTCG 1001 CCCGTCAGGG GCAGACGATG TTTTGGTCTT
GGCAAAACGC AATGGGCGGC 1051 ATATGCAGCA TGAAAAACTG GCTCAACCAA
GGATGGGCCG CCAAAGACGG 1101 CGTACACTTC TCCGCCCAAG GCTACCGGCG
CGCGGCGGAA ATGCTTGCCG 1151 ACAGCCTCGA AGAACTCGTC CGCGCCGCCG
CAATCAGGCA ATAA
This corresponds to the amino acid sequence <SEQ ID 1248; ORF
299.ng>:
TABLE-US-01546 g299.pep 1 MNPKHFIAFS ALFAATQAEA LPVASVSPDT
VTVSPSAPYT DTNGLLTDYG 51 NAAASPWMKK LRSVAQGSGE AFRILQIGDS
HTAGDFFTDA LRKRLQKTWG 101 DGGIGWVYPA NVKGQRMAAV RHSGNWQSFT
SRNNTGDFPL GGILAQTGSG 151 GGMTLTASDG KTGKQRVSLF AKPLLAEQTL
TVNGNTVSAN GGGWQVLDTG 201 AALPLAIQTE MPWDIGFINI ENPAGGITVS
AMGINGAQLT QWSKWRADRM 251 NDLAQTGADL VILSYGTNEA FNNNIDIADT
EQKWLDTVRQ IRDSLPAAGI 301 LIIGAPESLK NTLGVCGTRP VLLTEVQQMQ
RRVARQGQTM FWSWQNAMGG 351 ICSMKNWLNQ GWAAKDGVHF SAQGYRRAAE
MLADSLEELV RAAAIRQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1249>:
TABLE-US-01547 m299.seq 1 ATGAACCCCA AACACCTCAT CGCATTTTCC
GCCCTATTCG CCGCCACGCA 51 GGCAGAAGCC CTACCTGTCG CCTCCGTCAG
CCTCGACACC GTTACCGTTT 101 CCCCGTCCGC CCCCTACACC GATACAAACG
GGCTGCTGAC CGACTACGGC 151 AACGCCTCCG CCTCGCCTTG GATGAAAAAA
CTCCAATCCG TCGCACAAGG 201 CAGCGGCGAG ACCTTCCGTA TCCTGCAAAT
CGGCGACTCG CATACCGCCG 251 GCGACTTCTT TACCGACAGC CTGCGCAAAC
GCCTGCAAAA AACTTGGGGC 301 GACGGCGGCA TAGGCTGGGT TTACCCCGCC
AACGTCAAAG GGCAGCGCAT 351 GGCGGCCGTC CGGCACAACG GTAACTGGCA
AAGCCTCACC AGCAGGAACA 401 ACACCGGAGA CTTCCCGCTC GGCGGCATCC
TCGCCCACAC CGGCAGCGGC 451 GGCAGCATGA CCCTGACCGC ATCGGACGGC
ATAGCAAGCA AGCAGCGCGT 501 TTCCCTGTTT GCCAAACCCC TGCTTGCCGA
ACAAACCCTG ACCGTCAACG 551 GCAACACCGT CTCCGCCAAC GGCGGCGGCT
GGCAGGTACT GGATACGGGC 601 GCGGCACTGC CCCTGACCAT ACACACCGAA
ATGCCGTGGG ACATCGGCTT 651 CATCAACATC GAAAATCCCG CCGGCGGCAT
TACCGTTTCC GCGATGGGCA 701 TCAACGGCGC ACAATTAACC CAGTGGTCGA
AATGGCGTGC CGACCGTATG 751 AACGACCTCG CCCAAACCGG CGCCGATTTG
GTTATCCTTT CCTACGGCAC 801 CAACGAAGCT TTCAACAACA ACATCGACAT
TGCCGACACC GAACAAAAAT 851 GGCTGGATAC CGTCCGCCAA ATCCGCGACA
GCCTGCCTGC CGCCGGCATC 901 CTCATCATCG GCGCACCCGA ATCCCTGAAA
AACACGCTCG GCGTATGCGG 951 CACACGCCCC GTCCGCCTGA CCGAAGTCCA
ACAGATGCAG CGGCGCGTCG 1001 CCCGTCAGGG GCAGACGATG TTCTGGTCTT
GGCAAAACGC CATGGGCGGC 1051 ATATGCAGCA TGAAAAACTG GCTCAACCAA
GGATGGGCCG CCAAAGACGG 1101 CGTACACTTC TCCGCCAAAG GCTACCGGCG
CGCGGCGGAA ATGCTCGCCG 1151 ACAGCCTCGA AGAACTCGTC CGCTCCGCTG
CAATCAGGCA ATAA
This corresponds to the amino acid sequence <SEQ ID 1250; ORF
299>:
TABLE-US-01548 m299.pep 1 MNPKHLIAFS ALFAATQAEA LPVASVSLDT
VTVSPSAPYT DTNGLLTDYG 51 NASASPWMKK LQSVAQGSGE TFRILQIGDS
HTAGDFFTDS LRKRLQKTWG 101 DGGIGWVYPA NVKGQRMAAV RHNGNWQSLT
SRNNTGDFPL GGILAHTGSG 151 GSMTLTASDG IASKQRVSLF AKPLLAEQTL
TVNGNTVSAN GGGWQVLDTG 201 AALPLTIHTE MPWDIGFINI ENPAGGITVS
AMGINGAQLT QWSKWRADRM 251 NDLAQTGADL VILSYGTNEA FNNNIDIADT
EQKWLDTVRQ IRDSLPAAGI 301 LIIGAPESLK NTLGVCGTRP VRLTEVQQMQ
RRVARQGQTM FWSWQNAMGG 351 ICSMKNWLNQ GWAAKDGVHF SAKGYRRAAE
MLADSLEELV RSAAIRQ* m299/g299 95.5% identity in 397 aa overlap 10
20 30 40 50 60 m299.pep
MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNGLLTDYGNASASPWMKK
|||||:||||||||||||||||||||| ||||||||||||||||||||||||:||||||| g299
MNPKHFIAFSALFAATQAEALPVASVSPDTVTVSPSAPYTDTNGLLTDYGNAAASPWMKK 10 20
30 40 50 60 70 80 90 100 110 120 m299.pep
LQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAV
|:||||||||:||||||||||||||||||:|||||||||||||||||||||||||||||| g299
LRSVAQGSGEAFRILQIGDSHTAGDFFTDALRKRLQKTWGDGGIGWVYPANVKGQRMAAV 70 80
90 100 110 120 130 140 150 160 170 180 m299.pep
RHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTL
||:|||||:||||||||||||||||:|||||:|||||||| ::||||||||||||||||| g299
RHSGNWQSFTSRNNTGDFPLGGILAQTGSGGGMTLTASDGKTGKQRVSLFAKPLLAEQTL 130
140 150 160 170 180 190 200 210 220 230 240 m299.pep
TVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLT
|||||||||||||||||||||||||:|:|||||||||||||||||||||||||||||||| g299
TVNGNTVSANGGGWQVLDTGAALPLAIQTEMPWDIGFINIENPAGGITVSAMGINGAQLT 190
200 210 220 230 240 250 260 270 280 290 300 m299.pep
QWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g299
QWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGI 250
260 270 280 290 300 310 320 330 340 350 360 m299.pep
LIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQ
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| g299
LIIGAPESLKNTLGVCGTRPVLLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQ 310
320 330 340 350 360 370 380 390 m299.pep
GWAAKDGVHFSAKGYRRAAEMLADSLEELVRSAAIRQX
||||||||||||:||||||||||||||||||:|||||| g299
GWAAKDGVHFSAQGYRRAAEMLADSLEELVRAAAIRQX 370 380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1251>:
TABLE-US-01549 a299.seq 1 ATGAACCCCA AACACCTCAT CGCATTTTCC
GCCCTATTCG CCGCCACGCA 51 GGCAGAAGCC CTACCTGTCG CCTCAGTCAG
CCTCGACACC GTTACCGTTT 101 CCCCGTCCGC CCCCTACACC GATACAAACG
GGCTGCTGAC CGACTACGGC 151 AACGCCTCCG CCTCGCCTTG GATGAAAAAA
CTCCAATCCG TCGCACAAGG 201 CAGCGGCGAG ACCTTCCGTA TCCTGCAAAT
CGGCGACTCG CATACCGCCG 251 GCGACTTCTT TACCGACAGC CTGCGCAAAC
GCCTACAAAA AACTTGGGGC 301 GACGGCGGCA TAGGCTGGGT TTACCCCGCC
AACGTCAAAG GGCAGCGCAT 351 GGCGGCCGTC CGGCACAACG GTAACTGGCA
AAGCCTCACC AGCAGGAACA 401 ACACCGGAGA CTTCCCGCTC GGCGGCATCC
TCGCCCACAC CGGCAGCGGC 451 GGCAGCATGA CCCTGACCGC ATCGGACGGC
ATAGCAAGCA AGCAGCGCGT 501 TTCCCTGTTT GCCAAACCCC TGCTTGCCGA
ACAAACCCTG ACCGTCAACG 551 GCAACACCGT CTCCGCCAAC GGCGGCGGCT
GGCAGGTACT GGATACGGGC 601 GCGGCACTGC CCCTGACCAT ACACACCGAA
ATGCCGTGGG ACATCGGCTT 651 CATCAACATC GAAAATCCCG CCGGCGGCAT
TACCGTTTCC GCGATGGGCA 701 TCAACGGCGC ACAATTAACC CAGTGGTCGA
AATGGCGTGC CGACCGTATG 751 AACGACCTTG CCCAAACCGG CGCCGATCTA
GTCATCCTTG CCTACGGTAC 801 CAACGAAGCC TTCGGCGACA ACATCGACAT
TGCCGATACC GAACAGAAAT 851 GGCTGGATAC CGTCCGCCAA ATCCGCGACA
GCCTACCTGC CGCCGGCATC 901 CTCATCATCG GCGCGCCCGA ATCCCTGAAA
AACACGCTCG GCGTATGCGG 951 CACACGCCCC GTCCGCCTGA CCGAAGTCCA
ACAGATGCAG CGGCGCATCG 1001 CCCGTCAGGG GCAGACGATG TTCTGGTCTT
GGCAAAACGC GATGGGCGGC 1051 GTTTGCAGCA TGAAAAACTG GCTCAACCAC
GGATGGGCCG CCAAAGACGG 1101 CGTACACTTT TCCGCCAAAG GCTACCAACG
GTCGGCGGAA ATGCTCGCCG 1151 ACAGCCTCGA AGAACTCGTC CGCTCCGCTG
CAATCAGGCA ATAA
This corresponds to the amino acid sequence <SEQ ID 1252; ORF
299.a>:
TABLE-US-01550 a299.pep 1 MNPKHLIAFS ALFAATQAEA LPVASVSLDT
VTVSPSAPYT DTNGLLTDYG 51 NASASPWMKK LQSVAQGSGE TFRILQIGDS
HTAGDFFTDS LRKRLQKTWG 101 DGGIGWVYPA NVKGQRMAAV RHNGNWQSLT
SRNNTGDFPL GGILAHTGSG 151 GSMTLTASDG IASKQRVSLF AKPLLAEQTL
TVNGNTVSAN GGGWQVLDTG 201 AALPLTIHTE MPWDIGFINI ENPAGGITVS
AMGINGAQLT QWSKWRADRM 251 NDLAQTGADL VILAYGTNEA FGDNIDIADT
EQKWLDTVRQ IRDSLPAAGI 301 LIIGAPESLK NTLGVCGTRP VRLTEVQQMQ
RRIARQGQTM FWSWQNAMGG 351 VCSMKNWLNH GWAAKDGVHF SAKGYQRSAE
MLADSLEELV RSAAIRQ* m299/a299 98.0% identity in 397 aa overlap 10
20 30 40 50 60 m299.pep
MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNGLLTDYGNASASPWMKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a299
MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNGLLTDYGNASASPWMKK 10 20
30 40 50 60 70 80 90 100 110 120 m299.pep
LQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a299
LQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAV 70 80
90 100 110 120 130 140 150 160 170 180 m299.pep
RHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a299
RHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTL 130
140 150 160 170 180 190 200 210 220 230 240 m299.pep
TVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a299
TVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLT 190
200 210 220 230 240 250 260 270 280 290 300 m299.pep
QWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGI
|||||||||||||||||||||||:|||||||::||||||||||||||||||||||||||| a299
QWSKWRADRMNDLAQTGADLVILAYGTNEAFGDNIDIADTEQKWLDTVRQIRDSLPAAGI 250
260 270 280 290 300 310 320 330 340 350 360 m299.pep
LIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQ
||||||||||||||||||||||||||||||||:|||||||||||||||||:||||||||: a299
LIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRIARQGQTMFWSWQNAMGGVCSMKNWLNH 310
320 330 340 350 360 370 380 390 m299.pep
GWAAKDGVHFSAKGYRRAAEMLADSLEELVRSAAIRQX
|||||||||||||||:|:|||||||||||||||||||| a299
GWAAKDGVHFSAKGYQRSAEMLADSLEELVRSAAIRQX 370 380 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1253>:
TABLE-US-01551 g302.seq 1 ATGCACTCAA TATATTTTTT TAAGGAGAAG
CAGATGAGTC AAACCGACGC 51 GCGTCGTAGC GGACGATTTT TACGCACAGT
CGAATGGCTG GGCAATATGT 101 TGCCGCACCC GGTTACGCTT TTTATTATTT
TCATTGTGTT ATTGCTGATT 151 GCCTCTGCCG TCGGTGCGTA TTTCGGACTA
TCCGTCCCCG ATCCGCGTCC 201 TGTTGGGGCG AAAGGACGTG CCGATGACGG
TTTGATTCAC GTTGTCAGCC 251 TGCTCGATGC CGACGGTTTG ATCAAAATCC
TGACGCATAC CGTTAAAAAT 301 TTCACCGGTT TCGCGCCGTT GGGAACGGTG
TTGGTTTCTT TATTGGGCGT 351 GGGGATTGCG GAAAAATCGG GCTTGATTTC
CGCATTAATG CGCTTATTGC 401 TCACAAAATC CCCACGCAAA CTCACTACTT
TTATGGTTGT TTTTACAGGG 451 ATTTTATCCA ATACGGCTTC TGAATTGGGC
TATGTCGTCC TAATCCCTTT 501 GTCCGCCGTC ATCTTTCATT CGCTCGGCCG
CCATCCGCTT GCCGGTTTGG 551 CTGCGGCTTT CGCCGGCGTT TCGGGCGGTT
ATTCGGCCAA TCTGTTCTTA 601 GGCACAATCG ATCCGCTCTT GGCAGGCATC
ACCCAACAGG CGGCGCAAAT 651 CATCCATCCC GACTACGTCG TAGGCCCTGA
AGCCAACTGG TTTTTTATGG 701 CAGCCAGTAC GTTTGTGATT GCTTTGATTG
GTTATTTTGT TACTGAAAAA 751 ATCGTCGAAC CGCAATTGGG CCCTTATCAA
TCAGATTTGT CACAAGAAGA 801 AAAAGACATT CGGCATTCCA ATGAAATCAC
GCCTTTGGAA TATAAAGGAT 851 TAATTTGGGC AGGCGTGGTG TTTGTTGCCT
TATCCGCCCT ATTGGCTTGG 901 AGCATCGTCC CTGCCGACGG TATTTTGCGT
CATCCTGAAA CAGGATTGGT 951 TGCCGGTTCG CCGTTTTTAA AATCGATTGT
TGTTTTTATT TTCTTGTTGT 1001 TTGCGCTGCC GGGCATTGTT TATGGCCGGA
TAACCCGAAG TTTGCGCGGC 1051 GAACGGGAAG TCGTTAATGC GATGGCCGAA
TCGATGAGTA CTTTGGGACT 1101 TTATTTGGTC ATCATCTTTT TTGCCGCACA
GTTTGTCGCA TTTTTTAATT 1151 GGACGAATAT TGGGCAATAT ATTGCCGTTA
AAGGGGCGGT GTTCTTAAAA 1201 GAAGTCGGCT TGGGCGGCAG TGTGTTGTTT
ATCGGTTTTA TTTTAATTTG 1251 TGCTTTTATC AATCTGATGA TAGGCTCCGC
CTCCGCGCAA TGGGCGGTAA 1301 CTGCGCCGAT TTTCGTCCCT ATGCTGATGT
TGGCCGGCTA CGCGCCCCAA 1351 GTCATTCAAG CCGCTTACCG CATCGGTGAT
TCCGTTACCA ATATTATTAC 1401 GCCGATGATG AGTTATTTCG GGCTGATTAT
GGCGACGGTA ATCAAATACA 1451 AAAAAGATGC GGGCGTAGGC ACGCTGATTT
CTATGATGTT GCCGTATTCC 1501 GCTTTCTTCT TAATTGCATG GATCGCCTTA
TTCTGCATTT GGGTATTTGT 1551 TTTGGGTCTG CCCGTCGGTC CCGGCACACC
CACATTCTAT CCGGTGCCTT 1601 AA
This corresponds to the amino acid sequence <SEQ ID 1254; ORF
302.ng>:
TABLE-US-01552 g302.pep 1 MHSIYFFKEK QMSQTDARRS GRFLRTVEWL
GNMLPHPVTL FIIFIVLLLI 51 ASAVGAYFGL SVPDPRPVGA KGRADDGLIH
VVSLLDADGL IKILTHTVKN 101 FTGFAPLGTV LVSLLGVGIA EKSGLISALM
RLLLTKSPRK LTTFMVVFTG 151 ILSNTASELG YVVLIPLSAV IFHSLGRHPL
AGLAAAFAGV SGGYSANLFL 201 GTIDPLLAGI TQQAAQIIHP DYVVGPEANW
FFMAASTFVI ALIGYFVTEK 251 IVEPQLGPYQ SDLSQEEKDI RHSNEITPLE
YKGLIWAGVV FVALSALLAW 301 SIVPADGILR HPETGLVAGS PFLKSIVVFI
FLLFALPGIV YGRITRSLRG 351 EREVVNAMAE SMSTLGLYLV IIFFAAQFVA
FFNWTNIGQY IAVKGAVFLK 401 EVGLGGSVLF IGFILICAFI NLMIGSASAQ
WAVTAPIFVP MLMLAGYAPQ 451 VIQAAYRIGD SVTNIITPMM SYFGLIMATV
IKYKKDAGVG TLISMMLPYS 501 AFFLIAWIAL FCIWVFVLGL PVGPGTPTFY PVP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1255>:
TABLE-US-01553 m302.seq 1 ATGCACTCAA TATATTTTTT TAAGGAGAAG
CAGATGAGTC AAACCGATAC 51 GCAACGGGAC GGACGATTTT TACGCACAGT
CGAATGGCTG GGCAATATGT 101 TGCCGCATCC GGTTACGCTT TTTATTATTT
TCATTGTGTT ATTGCTGATT 151 GCCTCTGCCG TCGGTGCGTA TTTCGGACTA
TCCGTCCCCG ATCCGCGCCC 201 TGTTGGTGCG AAAGGACGTG CCGATGACGG
TTTGATTTAC ATTGTCAGCC 251 TGCTCAATGC CGACGGTTTT ATCAAAATCC
TGACGCATAC CGTTAAAAAT 301 TTCACCGGTT TCGCGCCGTT GGGAACGGTG
TTGGTTTCTT TATTGGGCGT 351 GGGGATTGCG GAAAAATCGG GCTTGATTTC
CGCATTAATG CGCTTATTGC 401 TCACAAAATC GCCACGCAAA CTCACTACTT
TTATGGTTGT TTTTACAGGG 451 ATTTTATCTA ATACCGCTTC TGAATTGGGC
TATGTCGTCC TAATCCCTTT 501 GTCCGCCATC ATCTTTCATT CCCTCGGCCG
CCATCCGCTT GCCGGTCTGG 551 CTGCGGCTTT CGCCGGCGTT TCGGGCGGTT
ATTCGGCCAA TCTGTTCTTA 601 AGCACAATCG ATCCGCTCTT GGCATGCATC
ACCCATCAGG CGGCGGTCGT 651 AGGCCCTGAA GCCAACTGGT TTTTTATGGT
AGCCAGTACG TTTGTGATTG 701 CTTTGATTGG TTATTTTGTT ACTGAAAAAA
TCGTCGAACC GCAATTGGGC 751 CCTTATCAAT CAGATTTGTC ACAAGAAGAA
AAAGACATTC GGCATTCCAA 801 TGAAATCACG CCTTTGGAAT ATAAAGGATT
AATTTGGGCT GGCGTGGTGT 851 TTGTTGCCTT ATCCGCCCTA TTGGCTTGGA
GCATCGTCCC TGCCGACGGT 901 ATTTTGCGTC ATCCTGAAAC AGGATTGGTT
TCCGGTTCGC CGTTTTTAAA 951 ATCGATTGTT GTTTTTATTT TCTTGTTGTT
TGCACTGyCG GGCmTTGTTT 1001 ATGGmCGGGT AACAGGAAGT TTGCGCGGCG
AACAGGAAGT CGTTAATGCG 1051 ATGGCCGAAT CGATGAGTAC TCTGGsGCTT
TmTTTGswCA kcATCTTTTT 1101 TGCCGCACAG TTTGTCGCAT TTTTTAATTG
GACGAATATT GGGCAATATA 1151 TTGCCGTTAA AGGGGCGACG TTCTTAAAAG
AAGTCGGCTT GGGCGGCAGC 1201 GTGTTGTTTA TCGGTTTTAT TTTAATTTGT
GCTTTTATCA ATCTGATGAT 1251 AGGCTCCGCC TCCGCGCAAT GGGCGGTAAC
TGCGCCGATT TTCGTCCCTA 1301 TGCTGATGTT GGCCGGCTAC GCGCCCGAAG
TCATTCAAGC CGCTTACCGC 1351 ATCGGTGATT CCGTTACCAA TATTATTACG
CCGATGATGA GTTATTTCGG 1401 GCTGATTATG GCGACGGTGA TCAAATACAA
AAAAGATGCG GGCGTGGGTA 1451 CGCTGATTTC TATGATGTTG CCGTATTCCG
CTTTCTTCTT GATTGCGTGG 1501 ATTGCCTTAT TCTGCATTTG GGTATTTGTT
TTGGGCCTGC CCGTCGGTCC 1551 CGGCGCGCCC ACATTCTATC CCGCACCTTA A
This corresponds to the amino acid sequence <SEQ ID 1256; ORF
302>:
TABLE-US-01554 m302.pep 1 MHSIYFFKEK QMSQTDTQRD GRFLRTVEWL
GNMLPHPVTL FIIFIVLLLI 51 ASAVGAYFGL SVPDPRPVGA KGRADDGLIY
IVSLLNADGF IKILTHTVKN 101 FTGFAPLGTV LVSLLGVGIA EKSGLISALM
RLLLTKSPRK LTTFMVVFTG 151 ILSNTASELG YVVLIPLSAI IFHSLGRHPL
AGLAAAFAGV SGGYSANLFL 201 STIDPLLACI THQAAVVGPE ANWFFMVAST
FVIALIGYFV TEKIVEPQLG 251 PYQSDLSQEE KDIRHSNEIT PLEYKGLIWA
GVVFVALSAL LAWSIVPADG 301 ILRHPETGLV SGSPFLKSIV VFIFLLFALX
GXVYGRVTRS LRGEQEVVNA 351 MAESMSTLXL XLXXIFFAAQ FVAFFNWTNI
GQYIAVKGAT FLKEVGLGGS 401 VLFIGFILIC AFINLMIGSA SAQWAVTAPI
FVPMLMLAGY APEVIQAAYR 451 IGDSVTNIIT PMMSYFGLIM ATVIKYKKDA
GVGTLISMML PYSAFFLIAW 501 IALFCIWVFV LGLPVGPGAP TFYPAP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 302
shows 94.0% identity over a 533 aa overlap with a predicted ORF
(ORF 302.ng) from N. gonorrhoeae:
TABLE-US-01555 m362/g302 10 20 30 40 50 60 m302.pep
MHSIYFFKEKQMSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVGAYFGL
||||||||||||||||::|:|||||||||||||||||||||||||||||||||||||||| g302
MHSIYFFKEKQMSQTDARRSGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVGAYFGL 10 20
30 40 50 60 70 80 90 100 110 120 m302.pep
SVPDPRPVGAKGRADDGLIYIVSLLNADGFIKILTHTVKNFTGFAPLGTVLVSLLGVGIA
|||||||||||||||||||::||||:|||:|||||||||||||||||||||||||||||| g302
SVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVSLLGVGIA 70 80
90 100 110 120 130 140 150 160 170 180 m302.pep
EKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAIIFHSLGRHPL
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| g302
EKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVIFHSLGRHPL 130
140 150 160 170 180 190 200 210 220 230 m302.pep
AGLAAAFAGVSGGYSANLFLSTIDPLLACITHQAA-------VVGPEANWFFMVASTFVI
||||||||||||||||||||:||||||| ||:||| |||||||||||:|||||| g302
AGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEANWFFMAASTFVI 190
200 210 220 230 240 240 250 260 270 280 290 m302.pep
ALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWAGVVFVALSALLAW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g302
ALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWAGVVFVALSALLAW 250
260 270 280 290 300 300 310 320 330 340 350 m302.pep
SIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALXGXVYGRVTRSLRGEQEVVNAMAE
|||||||||||||||||:|||||||||||||||||| | ||||:|||||||:|||||||| g302
SIVPADGILRHPETGLVAGSPFLKSIVVFIFLLFALPGIVYGRITRSLRGEREVVNAMAE 310
320 330 340 350 360 360 370 380 390 400 410 m302.pep
SMSTLXLXLXXIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVGLGGSVLFIGFILICAFI |||||
| | |||||||||||||||||||||||||:||||||||||||||||||||||| g302
SMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVGLGGSVLFIGFILICAFI 370
380 390 400 410 420 420 430 440 450 460 470 m302.pep
NLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDSVTNIITPMMSYFGLIMATV
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g302
NLMIGSASAQWAVTAPIFVPMLMLAGYAPQVIQAAYRIGDSVTNIITPMMSYFGLIMATV 430
440 450 460 470 480 480 490 500 510 520 m302.pep
IKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLGLPVGPGAPTFYPAPX
|||||||||||||||||||||||||||||||||||||||||||||:|||||:|| g302
IKYKKDAGVGILISMMLPYSAFFLIAWIALFCIWVFVLGLPVGPGIPTFYPVPX 490 500 510
520 530
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1257>:
TABLE-US-01556 a302.seq 1 ATGCACTCAA TATATTTTTT TAAGGAGAAG
CAGATGAGTC AAACCGATAC 51 GCAACGGGAC GGACGATTTT TACGCACAGT
CGAATGGCTG GGCAATATGT 101 TGCCGCACCC GGTTACGCTT TTTATTATTT
TCATTGTGTT ATTGCTGATT 151 GCCTCTGCCG CCGGTGCGTA TTTCGGACTA
TCCGTCCCCG ATCCGCGCCC 201 TGTTGGTGCG AAAGGACGTG CCGATGACGG
TTTGATTCAC GTTGTCAGCC 251 TGCTCGATGC TGACGGTTTG ATCAAAATCC
TGACGCATAC CGTTAAAAAT 301 TTCACCGGTT TCGCGCCGTT GGGAACGGTG
TTGGTTTCTT TATTGGGCGT 351 GGGGATTGCG GAAAAATCGG GCTTGATTTC
CGCATTAATG CGCTTATTGC 401 TCACAAAATC TCCACGCAAA CTCACTACTT
TTATGGTTGT TTTTACAGGG 451 ATTTTATCTA ATACCGCTTC TGAATTGGGC
TATGTCGTCC TAATCCCTTT 501 GTCCGCCATC ATCTTTCATT CCCTCGGCCG
CCATCCGCTT GCCGGTCTGG 551 CTGCGGCTTT CGCCGGCGTT TCGGGCGGTT
ATTCGGCCAA TCTGTTCTTA 601 GGCACAATCG ATCCGCTCTT GGCAGGCATC
ACCCAACAGG CGGCGCAAAT 651 CATCCATCCC GACTACGTCG TAGGCCCTGA
AGCCAACTGG TTTTTTATGG 701 TAGCCAGTAC GTTTGTGATT GCTTTGATTG
GTTATTTTGT TACTGAAAAA 751 ATCGTCGAAC CGCAATTGGG CCCTTATCAA
TCAGATTTGT CACAAGAAGA 801 AAAAGACATT CGACATTCCA ATGAAATCAC
GCCTTTGGAA TATAAAGGAT 851 TAATTTGGGC TGGCGTGGTG TTTGTTGCCT
TATCCGCCCT ATTGGCTTGG 901 AGCATCGTCC CTGCCGACGG TATTTTGCGT
CATCCTGAAA CAGGATTGGT 951 TTCCGGTTCG CCGTTTTTAA AATCAATTGT
TGTTTTTATT TTCTTGTTGT 1001 TTGCACTGCC GGGCATTGTT TATGGCCGGG
TAACCCGAAG TTTGCGCGGC 1051 GAACAGGAAG TCGTTAATGC GATGGCCGAA
TCGATGAGTA CTCTGGGGCT 1101 TTATTTGGTC ATCATCTTTT TTGCCGCACA
GTTTGTCGCA TTTTTTAATT 1151 GGACGAATAT TGGGCAATAT ATTGCCGTTA
AAGGGGCGAC GTTCTTAAAA 1201 GAAGTCGGCT TGGGCGGCAG CGTGTTGTTT
ATCGGTTTTA TTTTAATTTG 1251 TGCTTTTATC AATCTGATGA TAGGCTCCGC
CTCCGCGCAA TGGGCGGTAA 1301 CTGCGCCGAT TTTCGTCCCT ATGCTGATGT
TGGCCGGCTA CGCGCCCGAA 1351 GTCATTCAAG CCGCTTACCG CATCGGTGAT
TCCGTTACCA ATATTATTAC 1401 GCCGATGATG AGTTATTTCG GGCTGATTAT
GGCGACGGTG ATCAAATACA 1451 AAAAAGATGC GGGCGTGGGT ACGCTGATTT
CTATGATGTT GCCGTATTCC 1501 GCTTTCTTCT TGATTGCGTG GATTGCCTTA
TTCTGCATTT GGGTATTTGT 1551 TTTGGGCCTG CCCGTCGGTC CCGGCGCGCC
CACATTCTAT CCCGCACCTT 1601 AA
This corresponds to the amino acid sequence <SEQ ID 1258; ORF
302.a>:
TABLE-US-01557 a302.pep 1 MHSIYFFKEK QMSQTDTQRD GRFLRTVEWL
GNMLPHPVTL FIIFIVLLLI 51 ASAAGAYFGL SVPDPRPVGA KGRADDGLIH
VVSLLDADGL IKILTHTVKN 101 FTGFAPLGTV LVSLLGVGIA EKSGLISALM
RLLLTKSPRK LTTFMVVFTG 151 ILSNTASELG YVVLIPLSAI IFHSLGRHPL
AGLAAAFAGV SGGYSANLFL 201 GTIDPLLAGI TQQAAQIIHP DYVVGPEANW
FFMVASTFVI ALIGYFVTEK 251 IVEPQLGPYQ SDLSQEEKDI RHSNEITPLE
YKGLIWAGVV FVALSALLAW 301 SIVPADGILR HPETGLVSGS PFLKSIVVFI
FLLFALPGIV YGRVTRSLRG 351 EQEVVNAMAE SMSTLGLYLV IIFFAAQFVA
FFNWTNIGQY IAVKGATFLK 401 EVGLGGSVLF IGFILICAFI NLMIGSASAQ
WAVTAPIFVP MLMLAGYAPE 451 VIQAAYRIGD SVTNIITPMM SYFGLIMATV
IKYKKDAGVG TLISMMLPYS 501 AFFLIAWIAL FCIWVFVLGL PVGPGAPTFY PAP*
m302/a302 96.1% identity in 533 aa overlap 10 20 30 40 50 60
m302.pep
MHSIYFFKEKQMSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVGAYFGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||| a302
MHSIYFFKEKQMSQTDTQRDGRFLRIVEWLGNMLPHPVTLFIIFIVLLLIASAAGAYFGL 10 20
30 40 50 60 70 80 90 100 110 120 m302.pep
SVPDPRPVGAKGRADDGLIYIVSLLNADGFIKILTHTVKNFTGFAPLGTVLVSLLGVGIA
|||||||||||||||||||::||||:|||:|||||||||||||||||||||||||||||| a302
SVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVSLLGVGIA 70 80
90 100 110 120 130 140 150 160 170 180 m302.pep
EKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAIIFHSLGRHPL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a302
EKSGLISALMRLLLIKSPRKLITFMVVFIGILSNTASELGYVVLIPLSAIIFHSLGRHPL 130
140 150 160 170 180 190 200 210 220 230 m302.pep
AGLAAAFAGVSGGYSANLFLSTIDPLLACITHQAA-------VVGPEANWFFMVASTFVI
||||||||||||||||||||:||||||| ||:||| |||||||||||||||||| a302
AGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEANWFFMVASTFVI 190
200 210 220 230 240 240 250 260 270 280 290 m302.pep
ALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWAGVVFVALSALLAW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a302
ALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWAGVVFVALSALLAW 250
260 270 280 290 300 300 310 320 330 340 350 m302.pep
SIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALXGXVYGRVTRSLRGEQEVVNAMAE
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| a302
SIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVIRSLRGEQEVVNAMAE 310
320 330 340 350 360 360 370 380 390 400 410 m302.pep
SMSTLXLXLXXIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVGLGGSVLFIGFILICAFI ||||||
| ||||||||||||||||||||||||||||||||||||||||||||||||| a302
SMSTLGLYLVIIFFAAQFVAFFNWINIGQYIAVKGATFLKEVGLGGSVLFIGFILICAFI 370
380 390 400 410 420 420 430 440 450 460 470 m302.pep
NLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDSVTNIITPMMSYFGLIMATV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a302
NLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDSVTNIITPMMSYFGLIMATV 430
440 450 460 470 480 480 490 500 510 520 m302.pep
IKYKKDAGVGILISMMLPYSAFFLIAWIALFCIWVFVLGLPVGPGAPTFYPAPX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a302
IKYKKDAGVGILISMMLPYSAFFLIAWIALFCIWVFVLGLPVGPGAPTFYPAPX 490 500 510
520 530
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1259>:
TABLE-US-01558 g305.seq 1 ATGGATTTTT TGATTGTCCT GAAAGCCCTG
ATGATGGGCT TGGTAGAAGG 51 TTTTACCGAA TTTTTACCGA TTTCCAGCAC
CGGACATTTG ATTGTGTTCG 101 GCAATCTGAT TGGTTTTCAC AGCAATCACA
AGGTTTTTGA AATTGCCATC 151 CAGCTCGGTG CGGTTTTGGC GGTAGTGTTT
GAATACCGGC AGCGTTTCAG 201 CAATGTGTTG CATGGCGTGG GAAAAGACCG
GAAAGCCAAC CGTTTCGTCC 251 TCAATCTTGC CATTGCTTTT ATACCTGCCG
CCGTGATGGG GCTGTTGTTC 301 GACAAACAAA TCAAAGAGTA TCTGTTTAAC
CCCTTGAGTG TTGCAGTCAT 351 GCTGGTTTTG GGCGGTTTTT TTATTTTGTG
GGTGGAGAAA CGCCAAAGCC 401 GAGCAGAGCC TAAAATTGCC GATGTTGATG
CATTGCGTCC GATTGATGCG 451 TTGATGATCG GTGTTGCCCA AGTGTTTGCA
CTGGTTCCGG GTACGTCCCG 501 TTCGGGCAGT ACGGTTATGG GCGGGATGCT
TTGGGGAATC GAGCGGAAAA 551 CGGCAACGGA GTTTTCATTT TTCTTGGCCG
TTCCGATGAT GGTTGCAGCA 601 ACGGCTTATG ATGTCCTGAA ACATTACCGA
TTTTTCACCC TGCATGATGT 651 CGGTTTGATT TTGATAGGCT TTATTGCCGC
TTTTGTTTCC GGTTTGGTAG 701 CGGTTAAAGC ACTGCTGAAG TTTGTTTCCA
AGAAAAACTA TATCCCGTTT 751 GCCTATTACC GCATTGTTTT CGGCATTGTC
ATCATAATAT TGTGGTTGTC 801 GGGCTGGATA AGTTGGGAAT GA
This corresponds to the amino acid sequence <SEQ ID 1260; ORF
305.ng>:
TABLE-US-01559 g305.pep 1 MDFLIVLKAL MMGLVEGFTE FLPISSTGHL
IVFGNLIGFH SNHKVFEIAI 51 QLGAVLAVVF EYRQRFSNVL HGVGKDRKAN
RFVLNLAIAF IPAAVMGLLF 101 DKQIKEYLFN PLSVAVMLVL GGFFILWVEK
RQSRAEPKIA DVDALRPIDA 151 LMIGVAQVFA LVPGTSRSGS TVMGGMLWGI
ERKTATEFSF FLAVPMMVAA 201 TAYDVLKHYR FFTLHDVGLI LIGFIAAFVS
GLVAVKALLK FVSKKNYIPF 251 AYYRIVFGIV IIILWLSGWI SWE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1261>:
TABLE-US-01560 m305.seq (partial) 1 AtGGATTTTC TGATTGTCCT
GAAAGCCCTG ATGATGGGCT TGGTAGAAGG 51 TTTTACCGAA TTTTTACCGA
TTTCCAGCAC CGGACATTTG ATTGTGTTCG 101 GCAATCTGAT TGGTTTTCAC
AGCAATCACA AGGTTTTTGA AATTGCCATC 151 CAGCTCGGTG CAGTTTTGGC
GGTAGTGTTT GAATACCGGC AACGTTTCAG 201 CAATGTGTTG CACGGCTTGG
GAAAAGACCG GAAAGCCAAC CGCTTCGTCC 251 TTAATCTTGC CATTGCTTTT
ATACCTGCCG CCGTGATGGG GCTGTTGTTC 301 GGCAwACAAA TCAAAGAGyA
TCTGTTTAAC CCCTTGAGTG TTGCAGTCAT 351 GCTGGTTyTG GrCGGTTTTT
yTATTTTGTG GGTGGAGAAA CGCCAAAGCC 401 GAGCAGAGCC TAAAATTGCC
GATGTTGATG CATTGCGTCC GATTGATGCC 451 TTGATGATCG GCGTTGCCCA
AGTGTTTGCA CTGGTTCCGG GTACGTCCCG 501 TTCGGGCAGT ACGATTATGG
GCGGGATGCT TTGGGGCATC GAACGGAAAA 551 CTGCGACAGA ATTCTCGTTT
TTCTTGGCTG TGCCGATGAT GGTTGCCGCA 601 ACGGCTTATG ATGTCCTGAA
ACATTACCGA TTTTTCACCC TGCATGATGT 651 CGGTTTGATT CTGATAGGCT
TTATTGCTGC CTTTGTTTCA GGCTTGGTAG 701 CGGTAAAAGC GTTGCTGAGG
TTTGTTTCGG GTAC...
This corresponds to the amino acid sequence <SEQ ID 1262; ORF
305>:
TABLE-US-01561 m305.pep (partial) 1 MDFLIVLKAL MMGLVEGFTE
FLPISSTGHL IVFGNLIGFH SNHKVFEIAI 51 QLGAVLAVVF EYRQRFSNVL
HGLGKDRKAN RFVLNLAIAF IPAAVMGLLF 101 GXQIKEXLFN PLSVAVMLVL
XGFXILWVEK RQSRAEPKIA DVDALRPIDA 151 LMIGVAQVFA LVPGTSRSGS
TIMGGMLWGI ERKTATEFSF FLAVPMMVAA 201 TAYDVLKHYR FFTLHDVGLI
LIGFIAAFVS GLVAVKALLR FVSG...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 305
shows 96.7% identity over a 243 aa overlap with a predicted ORF
(ORF 305.ng) from N. gonorrhoeae:
TABLE-US-01562 g305/m305 10 20 30 40 50 60 g305.pep
MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHKVFEIAIQLGAVLAVVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m305
MDFLIVLKALMMGLVEGFTEFLPISSIGHLIVFGNLIGFHSNHKVFEIAIQLGAVLAVVF 10 20
30 40 50 60 70 80 90 100 110 120 g305.pep
EYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFDKQIKEYLFNPLSVAVMLVL
||||||||||||:||||||||||||||||||||||||||| |||| ||||||||||||| m305
EYRQRFSNVLHGLGKDRKANRFVLNLAIAFIPAAVMGLLFGXQIKEXLFNPLSVAVMLVL 70 80
90 100 110 120 130 140 150 160 170 180 g305.pep
GGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFALVPGTSRSGSTVMGGMLWGI ||
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||| m305
XGFXILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFALVPGTSRSGSTIMGGMLWGI 130
140 150 160 170 180 190 200 210 220 230 240 g305.pep
ERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVGLILIGFIAAFVSGLVAVKALLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: m305
ERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVGLILIGFIAAFVSGLVAVKALLR 190
200 210 220 230 240 250 260 270 g305.pep
FVSKKNYIPFAYYRIVFGIVIIILWLSGWISWEX ||| m305 FVSG
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1263>:
TABLE-US-01563 a305.seq 1 ATGGATTTTC TGATTGTCCT GAAAGCCCTG
ATGATGGGCT TGGTAGAAGG 51 TTTTACCGAA TTTTTACCGA TTTCCAGCAC
CGGACATTTG ATTGTGTTCG 101 GCAATCTGAT TGATTTTCAC AGCAATCACA
AGGTTTTTGA AATTACCATC 151 CAGCTCGGTG CGGTTTTGGC GGTAGTGTTT
GAATACCGGC AGCGTTTCAG 201 CAATGTGTTG CATGGCGTGG GAAAAGACCG
GAAAGCCAAC CGTTTCGTCC 251 TTAATCTTGC CATTGCTTTT ATACCTGCCG
CCGTGATGGG GCTGTTGTTC 301 GGCAAACAAA TCAAAGAGTA TCTGTTTAAC
CCCTTGAGTG TTGCAGTCAT 351 GCTGGTTTTG GGCGGTTTTT TTATTTTGTG
GGTGGAGAAA CGCCAAAGCC 401 GAGCAGAGCC TAAAATTGTC GATGTTGATG
CATTGCGTCC GATTGATGCG 451 TTGATGATCG GCGTTGCCCA AGTGTTTGCA
CTGGTTCCAG GTACGTCCCG 501 TTCGGGCAGT ACGATTATGG GCGGGATGCT
TTGGGGAATC GAGCGGAAAA 551 CGGCAACGGA GTTTTCATTT TTCTTGGCCG
TTCCGATGAT GGTTGCAGCA 601 ACGGCTTATG ATGTCCTGAA GCATTACCGG
TTTTTCACCC TGCATGATGT 651 CGGTTTGATT TTGATTGGCT TTGTTGCTGC
CTTTGTTTCA GGCTTGGTGG 701 CGGTCAAAGC GTTGCTGAGG TTTGTTTCCA
AGAAAAATTA TATTCCTTTT 751 GCCTATTACC GCATTGTTTT TGGTATTGCC
ATCATTATAT TGTGGCTGTC 801 AGGCTGGATA AGTTGGGAAT GA
This corresponds to the amino acid sequence <SEQ ID 1264; ORF
305.a>:
TABLE-US-01564 a305.pep 1 MDFLIVLKAL MMGLVEGFTE FLPISSTGHL
IVFGNLIDFH SNHKVFEITI 51 QLGAVLAVVF EYRQRFSNVL HGVGKDRKAN
RFVLNLAIAF IPAAVMGLLF 101 GKQIKEYLFN PLSVAVMLVL GGFFILWVEK
RQSRAEPKIV DVDALRPIDA 151 LMIGVAQVFA LVPGTSRSGS TIMGGMLWGI
ERKTATEFSF FLAVPMMVAA 201 TAYDVLKHYR FFTLHDVGLI LIGFVAAFVS
GLVAVKALLR FVSKKNYIPF 251 AYYRIVFGIA IIILWLSGWI SWE* m305/a305
96.3% identity in 243 aa overlap 10 20 30 40 50 60 m305.pep
MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHKVFEIAIQLGAVLAVVF
||||||||||||||||||||||||||||||||||||| ||||||||||:||||||||||| a305
MDFLIVLKALMMGLVEGFTEFLPISSIGHLIVFGNLIDFHSNHKVFEITIQLGAVLAVVF 10 20
30 40 50 60 70 80 90 100 110 120 m305.pep
EYRQRFSNVLHGLGKDRKANRFVLNLAIAFIPAAVMGLLFGXQIKEXLFNPLSVAVMLVL
||||||||||||:|||||||||||||||||||||||||||| |||| ||||||||||||| a305
EYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGKQIKEYLFNPLSVAVMLVL 70 80
90 100 110 120 130 140 150 160 170 180 m305.pep
XGFXILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFALVPGTSRSGSTIMGGMLWGI ||
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||| a305
GGFFILWVEKRQSRAEPKIVDVDALRPIDALMIGVAQVFALVPGTSRSGSTIMGGMLWGI 130
140 150 160 170 180 190 200 210 220 230 240 m305.pep
ERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVGLILIGFIAAFVSGLVAVKALLR
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| a305
ERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVGLILIGFVAAFVSGLVAVKALLR 190
200 210 220 230 240 m305.pep FVSG ||| a305
FVSKKNYIPFAYYRIVFGIAIIILWLSGWISWEX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1265>:
TABLE-US-01565 g306.seq 1 ATGTTTATGA ACAAATTTTC CCAATCCGGA
AAAGGTCTGT CCGGTTTCTT 51 CTTCGGTTTG ATACTGGCAA CGGTCATTAT
TGCCGGTATT TTGCTTTATC 101 TGAACCAGGG CGGTCAAAAT GCGTTCAAAA
TCCCGGCTCC GTCGAAGCAG 151 CCTGCAGAAA CGGAAATCCT GAAACTGAAA
AACCAGCCTA AGGAAGACAT 201 CCAACCTGAA CCGGCCGATC AAAACGCCTT
GTCCGAACCG GATGTTGCGA 251 AAGAGGCAGA GCAGTCGGAT GCGGAAAAAG
CTGCCGACAA GCAGCCCGTT 301 GCCGACAAAG CCGACGAGGT TGAAGAAAAG
GCGGGCGAGC CGGAACGGGA 351 AGAGCCGGAC GGACAGGCAG TGCGCAAGAA
AGCACTGACT GAAGAGCGTG 401 AACAAACCGT CAGGGAAAAA GCGCAGAAGA
AAGATGCCGA AACGGTTAAA 451 AAAAAAGCGG TAAAACCGTC TAAAGAAACA
GAGAAAAAAG CTTCAAAAGA 501 AGAGAAAAAG GCGGCGAAAG AAAAAGTTGC
ACCCAAACCG ACCCCGGAAC 551 AAATCCTCAA CAGCCGCAGT ATCGAAAAAG
CGCGTAGTGC CGCTGCCAAA 601 GAAGTGCAGA AAATGAAAAA CTTTGGGCAA
GGCGGAAGCC AACGCATTAT 651 CTGCAAATGG GCGCGTATGC CGAACCCCGG
AGCGCGGAAG GGCAGCGTGC 701 CAAACTGGCA ATCTTGGGCA TATCTTCCGA
AGTGGTCGGC TATCAGGCGG 751 GACATAAAAC GCTTTACCGC GTGCAAAGCG
GCAATATGTC CGCCGATGCG 801 GTGA
This corresponds to the amino acid sequence <SEQ ID 1266; ORF
306.ng>:
TABLE-US-01566 g306.pep 1 MFMNKFSQSG KGLSGFFFGL ILATVIIAGI
LLYLNQGGQN AFKIPAPSKQ 51 PAETEILKLK NQPKEDIQPE PADQNALSEP
DVAKEAEQSD AEKAADKQPV 101 ADKADEVEEK AGEPEREEPD GQAVRKKALT
EEREQTVREK AQKKDAETVK 151 KKAVKPSKET EKKASKEEKK AAKEKVAPKP
TPEQILNSRS IEKARSAAAK 201 EVQKMKNFGQ GGSQRIICKW ARMPNPGARK
GSVPNWQSWA YLPKWSAIRR 251 DIKRFTACKA AICPPMR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1267>:
TABLE-US-01567 m306.seq (partial) 1 ..GGTTTGTTCT TCGGTTTGAT
ACTGGCGACG GTCATTATTG CCGGTATTTT 51 GTTTTATCTG AACCAGAGCG
GTCAAAATGC GTTCAAAATC CCGGCTTCGT 101 CGAAGCAGCC TGCAGAAACG
GAAATCCTGA AACCGmAwAA CCAGCyTAAG 151 GAAGACATCC AACCTGAwCC
GGCCGATCAA AACGCCTTGT CCGAACCGGA 201 TGCTGCGACA GAGGCAGAGC
AGTCGGATGC GGAAAAwGCT GCCGACAAGC 251 AGCCCGTTGC CGATAAAGCC
GACGAGGTTG AAGAAAAGGC GGGCGAGCCG 301 GAACGGGAAG AGCCGGACGG
ACAGGCAGTG CGTAAGAAAG CGCTGACGGA 351 AGAGCGTGAA CAAACCGTCA
GGGAAAAAGC GCAGAAGAAA GATGCCGAAA 401 CGGTTAAAAw ACAAGCGGTA
AAACCGTCTA AAGAAACAGA GAAAAAAGCT 451 TCAAAAGAAG AGAAAAAGGC
GGCGAAGGAA AAAGTTGCAC CCAAACCAAC 501 CCCGGAACAA ATCCTCAACA
GCGGCAGCAT CGAAAAAGCG CGCAGTGCCG 551 CCGCCAAAGA AGTGCAGAAA
ATGAAAACGC CGACAAGGCG GAAGCAACGC 601 ATTATCTGCA AATGGGCGCG
TATGCCGACC GTCAGAGCGC GGAAGGGCAG 651 CGTGCCAAAC TGGCAATCTT
GGGCATATCT TCCAAGGTGG TCGGTTATCA 701 GGCGGGACAT AAAACGCTTT
ACCGGGTGCA AAGCGGCAAT ATGTCTGCCG 751 ATGCGGTGA
This corresponds to the amino acid sequence <SEQ ID 1268; ORF
306>:
TABLE-US-01568 m306.pep (partial) 1 ..GLFFGLILAT VIIAGILFYL
NQSGQNAFKI PASSKQPAET EILKPXNQXK 51 EDIQPXPADQ NALSEPDAAT
EAEQSDAEXA ADKQPVADKA DEVEEKAGEP 101 EREEPDGQAV RKKALTEERE
QTVREKAQKK DAETVKXQAV KPSKETEKKA 151 SKEEKKAAKE KVAPKPTPEQ
ILNSGSIEKA RSAAAKEVQK MKTPTRRKQR 201 IICKWARMPT VRARKGSVPN
WQSWAYLPRW SVIRRDIKRF TGCKAAICLP 251 MR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 306
shows 88.9% identity over a 253 aa overlap with a predicted ORF
(ORF 306.ng) from N. gonorrhoeae:
TABLE-US-01569 m306/g306 10 20 30 40 m306.pep
GLFFGLILATVIIAGILFYLNQSGQNAFKIPASSKQPAETEILKPX
|:|||||||||||||||:||||:||||||||| ||||||||||| g306
MFMNKFSQSGKGLSGFFFGLILATVIIAGILLYLNQGGQNAFKIPAPSKQPAETEILKLK 10 20
30 40 50 60 50 60 70 80 90 100 m306.pep
NQXKEDIQPXPADQNALSEPDAATEAEQSDAEXAADKQPVADKADEVEEKAGEPEREEPD ||
|||||| |||||||||||:| |||||||| ||||||||||||||||||||||||||| g306
NQPKEDIQPEPADQNALSEPDVAKEAEQSDAEKAADKQPVADKADEVEEKAGEPEREEPD 70 80
90 100 110 120 110 120 130 140 150 160 m306.pep
GQAVRKKALTEEREQTVREKAQKKDAETVKXQAVKPSKETEKKASKEEKKAAKEKVAPKP
|||||||||||||||||||||||||||||| :|||||||||||||||||||||||||||| g306
GQAVRKKALTEEREQTVREKAQKKDAETVKKKAVKPSKETEKKASKEEKKAAKEKVAPKP 130
140 150 160 170 180 170 180 190 200 210 220 m306.pep
TPEQILNSGSIEKARSAAAKEVQKMKTPTRR-KQRIICKWARMPTVRARKGSVPNWQSWA
|||||||| |||||||||||||||||: : :|||||||||||: ||||||||||||| g306
TPEQILNSRSIEKARSAAAKEVQKMKNFGQGGSQRIICKWARMPNPGARKGSVPNWQSWA 190
200 210 220 230 240 230 240 250 m306.pep
YLPRWSVIRRDIKRFTGCKAAICLPMRX |||:||:|||||||||:|||||| |||| g306
YLPKWSAIRRDIKRFTACKAAICPPMRX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1269>:
TABLE-US-01570 a306.seq 1 ATGTTTATGA ACAAATTTTC CCAATCCGGA
AAAGGTCTGT CCGGTTTTTT 51 CTTCGGTTTG ATACTGGCGA CGGTCATTAT
TGCCGGTATT TTGTTTTATC 101 TGAACCAGAG CGGTCAAAAT GCGTTCAAAA
TCCCGGTTCC GTCGAAGCAG 151 CCTGCAGAAA CGGAAATCCT GAAACCGAAA
AACCAGCCTA AGGAAGACAT 201 CCAACCTGAA CCGGCCGATC AAAACGCCTT
GTCCGAACCG GATGCTGCGA 251 AAGAGGCAGA GCAGTCGGAT GCGGAAAAAG
CTGCCGACAA GCAGCCCGTT 301 GCCGACAAAG CCGACGAGGT TGAGGAAAAG
GCGGACGAGC CGGAGCGGGA 351 AAAGTCGGAC GGACAGGCAG TGCGCAAGAA
AGCACTGACG GAAGAGCGTG 401 AACAAACCGT CGGGGAAAAA GCGCAGAAGA
AAGATGCCGA AACGGTTAAA 451 AAACAAGCGG TAAAACCATC TAAAGAAACA
GAGAAAAAAG CTTCAAAAGA 501 AGAGAAAAAG GCGGAGAAGG AAAAAGTTGC
ACCCAAACCG ACCCCGGAAC 551 AAATCCTCAA CAGCGGCAGC ATCGAAAAAG
CGCGCAGTGC CGCTGCCAAA 601 GAAGTGCAGA AAATGAAAAC GCCGACAAGG
CGGAAGCAAC GCATTATCTG 651 CAAATGGGCG CGTATGCCGA CCGCCGGAGC
GCGGAAGGGC AGCGTGCCAA 701 ACTGGCAATC TTGGGCATAT CTTCCAAGGT
GGTCGGTTAT CAGGCGGGAC 751 ATAAAACGCT TTACCGGGTG CAAAGCGGCA
ATATGTCTGC CGATGCGGTG 801 A
This corresponds to the amino acid sequence <SEQ ID 1270; ORF
306.a>:
TABLE-US-01571 a306.pep 1 MFMNKFSQSG KGLSGFFFGL ILATVIIAGI
LFYLNQSGQN AFKIPVPSKQ 51 PAETEILKPK NQPKEDIQPE PADQNALSEP
DAAKEAEQSD AEKAADKQPV 101 ADKADEVEEK ADEPEREKSD GQAVRKKALT
EEREQTVGEK AQKKDAETVK 151 KQAVKPSKET EKKASKEEKK AEKEKVAPKP
TPEQILNSGS IEKARSAAAK 201 EVQKMKTPTR RKQRIICKWA RMPTAGARKG
SVPNWQSWAY LPRWSVIRRD 251 IKRFTGCKAA ICLPMR* m306/a306 93.7%
identity in 252 aa overlap 10 20 30 40 m306.pep
GLFFGLILATVIIAGILFYLNQSGQNAFKIPASSKQPAETEILKPX
|:|||||||||||||||||||||||||||||: |||||||||||| a306
MFMNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPVPSKQPAETEILKPK 10 20
30 40 50 60 50 60 70 80 90 100 m306.pep
NQXKEDIQPXPADQNALSEPDAATEAEQSDAEXAADKQPVADKADEVEEKAGEPEREEPD ||
|||||| ||||||||||||| |||||||| |||||||||||||||||| |||||: | a306
NQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKADEVEEKADEPEREKSD 70 80
90 100 110 120 110 120 130 140 150 160 m306.pep
GQAVRKKALTEEREQTVREKAQKKDAETVKXQAVKPSKETEKKASKEEKKAAKEKVAPKP
||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| a306
GQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEKKASKEEKKAEKEKVAPKP 130
140 150 160 170 180 170 180 190 200 210 220 m306.pep
TPEQILNSGSIEKARSAAAKEVQKMKTPTRRKQRIICKWARMPTVRARKGSVPNWQSWAY
||||||||||||||||||||||||||||||||||||||||||||: |||||||||||||| a306
TPEQILNSGSIEKARSAAAKEVQKMKTPTRRKQRIICKWARMPTAGARKGSVPNWQSWAY 190
200 210 220 230 240 230 240 250 m306.pep
LPRWSVIRRDIKRFTGCKAAICLPMRX ||||||||||||||||||||||||||| a306
LPRWSVIRRDIKRFTGCKAAICLPMRX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1271>:
TABLE-US-01572 g307.seq 1 atgaaaacct tcttcaaaac cctttcgacc
gcgtcactcg cgctcatcct 51 cgcagcctgc ggcggtcaaa aagacagcgc
gcccgcagcc tctgccgccg 101 ccccttctgc cgataacggc gcggcgaaaa
aagaaatcgt cttcggcacg 151 accgtgggcg acttcggcga tatggtcaaa
gaacaaatcc aagccgagct 201 ggagaaaaaa ggctacaccg tcaaattggt
cgaatttacc gactatgtgc 251 gcccgaatct ggcattggcg gagggcgagt
tggacatcaa cgtcttccaa 301 cacaaaccct atcttgacga tttcaaaaaa
gaacacaacc tggacatcac 351 cgaagccttc caagtgccga ccgcgccttt
gggactgtat ccgggcaaac 401 tgaaatcgct ggaagaagtc aaagacggca
gcaccgtatc cgcgcccaac 451 gacccgtcca acttcgcacg cgccttggtg
atgctgaacg aactgggttg 501 gatcaaactc aaagacggca tcaatccgct
gaccgcatcc aaagccgaca 551 tcgcggaaaa cctgaaaaac atcaaaatcg
tcgagcttga agccgcacaa 601 ctgccgcgca gccgcgccga cgtggatttt
gccgtcgtca acggcaacta 651 cgccataagc agcggcatga agctgaccga
agccctgttc caagagccga 701 gctttgccta tgtcaactgg tctgccgtca
aaaccgccga caaagacagc 751 caatggctta aagacgtaac cgaggcctat
aactccgacg cgttcaaagc 801 ctacgcgcac aaacgcttcg agggctacaa
ataccctgcc gcatggaatg 851 aaggcgcagc caaataa
This corresponds to the amino acid sequence <SEQ ID 1272; ORF
307.ng>:
TABLE-US-01573 g307.pep 1 MKTFFKTLST ASLALILAAC GGQKDSAPAA
SAAAPSADNG AAKKEIVFGT 51 TVGDFGDMVK EQIQAELEKK GYTVKLVEFT
DYVRPNLALA EGELDINVFQ 101 HKPYLDDFKK EHNLDITEAF QVPTAPLGLY
PGKLKSLEEV KDGSTVSAPN 151 DPSNFARALV MLNELGWIKL KDGINPLTAS
KADIAENLKN IKIVELEAAQ 201 LPRSRADVDF AVVNGNYAIS SGMKLTEALF
QEPSFAYVNW SAVKTADKDS 251 QWLKDVTEAY NSDAFKAYAH KRFEGYKYPA
AWNEGAAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1273>:
TABLE-US-01574 m307.seq (partial) 1 ..CAATGGCTTA AAGACGTAAC
CGAGGCCTAT AACTCCGACG CGTTCAAAGC 51 CTACGCGCAC AAACGCTTCG
AGGGCTACAA ATCCCCTGCC GCATGGAATG 101 AAGGCGCAGC CAAATAA
This corresponds to the amino acid sequence <SEQ ID 1274; ORF
307>:
TABLE-US-01575 m307.pep (partial) 1 ..QWLKDVTEAY NSDAFKAYAH
KRFEGYKSPA AWNEGAAK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 307
shows 97.4% identity over a 38 aa overlap with a predicted ORF (ORF
307.ng) from N. gonorrhoeae:
TABLE-US-01576 m307/g307 10 20 30 m307.pep
QWLKDVTEAYNSDAFKAYAHKRFEGYKSPA ||||||||||||||||||||||||||| || g307
SGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYKYPA 230
240 250 260 270 280 39 m307.pep AWNEGAAKX ||||||||| g307
AWNEGAAKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1275>:
TABLE-US-01577 a307.seq 1 ATGAAAACCT TCTTCAAAAC CCTTTCCGCC
GCCGCACTCG CGCTCATCCT 51 CGCCGCCTGC GGCGGTCAAA AAGATAGCGC
GCCCGCCGCA TCCGCTTCTG 101 CCGCCGCCGA CAACGGCGCG GCGAAAAAAG
NAATCGTCTT CGGCACGACC 151 GTCGGCGACT TCGGCGATAT GGTCAAAGAA
CAAATCCAAC CCGAGCTGGA 201 GAAAAAAGGC TACACCGTCA AACTGGTCGA
GTTTACCGAC TATGTGCGCC 251 CGAATCTGGC ATTGGCTGAG GGCGAGTNGG
ACATCAACGT CTTCCAACAC 301 AAACCCTATC TTGACGACTT CAAAAAAGAA
CACAATCTGG ACATCACCGA 351 AGTCTTCCAA GTGCCGACCG CGCCTTTGGG
ACTGTACCCG GGCAAGCTGA 401 AATCGCTGGA AGAAGTCAAA GACGGCAGCA
CCGTATCCGC GCCCAACGAC 451 CCGTCCAACT TCGCCCGCGT CTTGGTGATG
CTCGACGAAC TGGGTTGGAT 501 CAAACTCAAA GANGGCATCA ATCCGCTGAC
CGCATCCAAA GCGGACATTG 551 CCGAAAACCT GAAAAACATC AAAATCGTCG
AGCTTGAAGC CGCGCAACTG 601 CCGCGTAGCC GCGCCGACGT GGATTTTGNC
GTCGTCAACG GCAANTACGC 651 CATAAGCAGC GGCATGAAGC TGACCGAAGC
CCTGTTCCAA GAACCGAGCT 701 TTGCCTATGT CAACTGGTCT GCCGTCAAAA
CCGCCGACAA AGACAGCCAA 751 TGGCTTAAAG ACGTAACCGA GGCCTATAAC
TCCGACGCGT TCAAAGCCTA 801 CGCGCACAAA CGCTTCGAGG GCTACAAATC
CCCTGCCGCA TGGAATGAAG 851 GCGCAGCCAA ATAA
This corresponds to the amino acid sequence <SEQ ID 1276; ORF
307.a>:
TABLE-US-01578 a307.pep 1 MKTFFKTLSA AALALILAAC GGQKDSAPAA
SASAAADNGA AKKXIVFGTT 51 VGDFGDMVKE QIQPELEKKG YTVKLVEFTD
YVRPNLALAE GEXDINVFQH 101 KPYLDDFKKE HNLDITEVFQ VPTAPLGLYP
GKLKSLEEVK DGSTVSAPND 151 PSNFARVLVM LDELGWIKLK XGINPLTASK
ADIAENLKNI KIVELEAAQL 201 PRSRADVDFX VVNGXYAISS GMKLTEALFQ
EPSFAYVNWS AVKTADKDSQ 251 WLKDVTEAYN SDAFKAYAHK RFEGYKSPAA WNEGAAK*
m307/a307 100.0% identity in 38 aa overlap 10 20 30 m307.pep
QWLKDVTEAYNSDAFKAYAHKRFEGYKSPA |||||||||||||||||||||||||||||| a307
SGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYKSPA 220
230 240 250 260 270 39 m307.pep AWNEGAAKX ||||||||| a307 AWNEGAAKX
280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1277>:
TABLE-US-01579 g308.seq 1 ATGTTAAATC GGGTATTTTA TCGGATATTG
GGTGTTGCCG ACAATTTGTA 51 TCCGTGTTTA TCGGATTTCT GTTTTTTCAC
TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA AGGCGGATGA
TGGTACGGCG TTTGATAATC 151 GGCATCAGCG GGGCGAGCGG TTTCCAATAC
GGCGTGAAGG CTTTGGAACT 201 TTTGCGCGCG CAAGATGTCG AAACGCACCT
TGTGGTATCG AAAGGCGCGG 251 AGATGGCGCG CGCTTCGGAA ACGGATTATA
CGAAAGACGA AGTATATGCC 301 TTGGCTGATT TCGTCCATCC GATCGGCAAT
ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGACG GGATGCTGGT
CGCACCCTGT TCGATGCGGA 401 CGCTTGCCTC TGTCGCGCAC GGCTTCGGCG
ACAACCTCTT GACGCGTGCG 451 GCGGATGTGG TTTTGAAGGA AAGGCGGCGG
CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC ATTTGGACAA
TATGAAGCGG GTAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC CCTGTTCCTG
CGATGTACCG CAAGCCGCAG 601 ACGGCGGACG ACATAGTGGC GCACAGTATC
GCACACACGC TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT TGGCGGAATG
GCAGGGAATG GCGGATTAA
This corresponds to the amino acid sequence <SEQ ID 1278; ORF
308.ng>:
TABLE-US-01580 g308.pep 1 MLNRVFYRIL GVADNLYPCL SDFCFFTIIA
GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALELLRA QDVETHLVVS
KGAEMARASE TDYTKDEVYA 101 LADFVHPIGN IGACIASGTF KTDGMLVAPC
SMRTLASVAH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL NLAHLDNMKR
VTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSI AHTLSLFGID TPDLAEWQGM AD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1279>:
TABLE-US-01581 m308.seq (partial) 1 ATGTTAAATC GGGTATTTTA
TCGGATATTG GGTGTTGCCG ACAATTTGTA 51 TCCGCGTTTA TCGGATTTCT
GTTTTTTCAC TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA
AGGCGGATGA TGGTACGGCG TTTGATAATC 151 GGCATCAGCG GGGCGAGCGG
TTTCCAATAC GGCGTGAAGG CTTTGGAACT 201 TTTGCGCGCG CAAGATGTCG
AAACGCACCT TGTGGTATCG AAAGGTGCGG 251 AGATGGCGCG CGCTTCGGAA
ACGGCTTATG CGAGAGACGA GGTATATGCC 301 TTGGCGGACT TCGTGCATCC
GATCGGCAAT ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGATG
GGATGCTGGT CGCCCCCTGT TCGATGCGGA 401 CGCTTGCCTC TGTCGCGCAC
GGCTTCGGCG ACAATCTGcT GACGCgTGCG 451 GCGGATGTGG TTTTGAAGGA
AAGGCGGCGG CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC
ATTTGGACAA TATGAAGCGG GwAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC
CCTGTTCCTG CGATGTACCG CAAACCGCAG 601 ACGGCGGACG ACATAGTGGC
GCACAGTGTT GCACACGCtT TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT
CGGCGGAATG GCArGGAATG gcG...
This corresponds to the amino acid sequence <SEQ ID 1280; ORF
308>:
TABLE-US-01582 m308.pep (partial) 1 MLNRVFYRIL GVADNLYPRL
SDFCFFTIIA GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALELLRA
QDVETHLVVS KGAEMARASE TAYARDEVYA 101 LADFVHPIGN IGACIASGTF
KTDGMLVAPC SMRTLASVAH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL
NLAHLDNMKR XTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSV AHALSLFGID
TPDSAEWQGM A..
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 308
shows 96.5% identity over a 231 aa overlap with a predicted ORF
(ORF 308.ng) from N. gonorrhoeae:
TABLE-US-01583 m308/g308 10 20 30 40 50 60 m308.pep
MLNRVFYRILGVADNLYPRLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g308
MLNRVFYRILGVADNLYPCLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY 10 20
30 40 50 60 70 80 90 100 110 120 m308.pep
GVKALELLRAQDVETHLVVSKGAEMARASETAYARDEVYALADFVHPIGNIGACIASGTF
||||||||||||||||||||||||||||||| |::||||||||||||||||||||||||| g308
GVKALELLRAQDVETHLVVSKGAEMARASETDYTKDEVYALADFVHPIGNIGACIASGTF 70 80
90 100 110 120 130 140 150 160 170 180 m308.pep
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g308
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR 130
140 150 160 170 180 190 200 210 220 230 m308.pep
XTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMA
||||||||||||||||||||||||||||:||:|||||||||| ||||||| g308
VTEMGGVVFPPVPAMYRKPQTADDIVAHSIAHTLSLFGIDTPDLAEWQGMADX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1281>:
TABLE-US-01584 a308.seq 1 ATGTTAAATC GGATATTTTA TCGGATATTG
GGTGTTGCCG ACAATTTGTA 51 TCCGTATTTA TCGGATTTCT GTTTTTTCAC
TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA AGGCGGATGA
TGGTACGGCG TTTGATAATC 151 GGCATCAGTG GGGCGAGCGG TTTCCAATAC
GGCGTGAAGG CTTTGGANCT 201 TTTACGCGCG CAAGATATCG AAACGCACCT
TGTGGTATCG AAAGGTGCGG 251 AGATGGCGCG CGCTTCGGAA ACGGNTTATG
CGAGAGACGA NGTATATGCC 301 TTGGCGGACT TNGTGCATCC GATCGGCAAT
ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGACG GGATGCTGGT
CGCCCCCTGT TCGATGCGGA 401 CGCTTGCCTC GGTCGTGCAC GGCTTCGGCG
ACAACCTCTT GACGCGTGCG 451 GCGGATGTGG TTTTGAAGGA AAGGCGGCGG
CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC ATTTGGACAA
TATGAANCGG GTAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC CCTGTTCCTG
CGATGTACCG CAAACCGCAG 601 ACGGCGGACG ACATAGTGGC GCACAGTGTT
GCACACGCTT TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT CGGCGGAATG
GCAGGGAATG GCGGATTAA
This corresponds to the amino acid sequence <SEQ ID 1282; ORF
308.a>:
TABLE-US-01585 a308.pep 1 MLNRIFYRIL GVADNLYPYL SDFCFFTIIA
GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALXLLRA QDIETHLVVS
KGAEMARASE TXYARDXVYA 101 LADXVHPIGN IGACIASGTF KTDGMLVAPC
SMRTLASVVH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL NLAHLDNMXR
VTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSV AHALSLFGID TPDSAEWQGM AD*
m308/a308 95.7% identity in 231 aa overlap 10 20 30 40 50 60
m308.pep
MLNRVFYRILGVADNLYPRLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY
||||:||||||||||||| ||||||||||||||||||||||||||||||||||||||||| a308
MLNRIFYRILGVADNLYPYLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY 10 20
30 40 50 60 70 80 90 100 110 120 m308.pep
GVKALELLRAQDVETHLVVSKGAEMARASETAYARDEVYALADFVHPIGNIGACIASGTF |||||
||||||:|||||||||||||||||| |||| |||||| |||||||||||||||| a308
GVKALXLLRAQDIETHLVVSKGAEMARASETXYARDXVYALADXVHPIGNIGACIASGTF 70 80
90 100 110 120 130 140 150 160 170 180 m308.pep
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| | a308
KTDGMLVAPCSMRTLASVVHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMXR 130
140 150 160 170 180 190 200 210 220 230 m308.pep
XTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMA
|||||||||||||||||||||||||||||||||||||||||||||||||| a308
VTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMADX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1283>:
TABLE-US-01586 g308-1.seq 1 ATGTTAAATC GGGTATTTTA TCGGATATTG
GGTGTTGCCG ACAATTTGTA 51 TCCGTGTTTA TCGGATTTCT GTTTTTTCAC
TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA AGGCGGATGA
TGGTACGGCG TTTGATAATC 151 GGCATCAGCG GGGCGAGCGG TTTCCAATAC
GGCGTGAAGG CTTTGGAACT 201 TTTGCGCGCG CAAGATGTCG AAACGCACCT
TGTGGTATCG AAAGGCGCGG 251 AGATGGCGCG CGCTTCGGAA ACGGATTATA
CGAAAGACGA AGTATATGCC 301 TTGGCTGATT TCGTCCATCC GATCGGCAAT
ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGACG GGATGCTGGT
CGCACCCTGT TCGATGCGGA 401 CGCTTGCCTC TGTCGCGCAC GGCTTCGGCG
ACAACCTCTT GACGCGTGCG 451 GCGGATGTGG TTTTGAAGGA AAGGCGGCGG
CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC ATTTGGACAA
TATGAAGCGG GTAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC CCTGTTCCTG
CGATGTACCG CAAGCCGCAG 601 ACGGCGGACG ACATAGTGGC GCACAGTATC
GCACACACGC TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT TGGCGGAATG
GCAGGGAATG GCGGATTAA
This corresponds to the amino acid sequence <SEQ ID 1284; ORF
308-1.ng>:
TABLE-US-01587 g308-1.pep 1 MLNRVFYRIL GVADNLYPCL SDFCFFTIIA
GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALELLRA QDVETHLVVS
KGAEMARASE TDYTKDEVYA 101 LADFVHPIGN IGACIASGTF KTDGMLVAPC
SMRTLASVAH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL NLAHLDNMKR
VTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSI AHTLSLFGID TPDLAEWQGM AD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1285>:
TABLE-US-01588 m308-1.seq 1 ATGTTAAATC GGGTATTTTA TCGGATATTG
GGTGTTGCCG ACAATTTGTA 51 TCCGCGTTTA TCGGATTTCT GTTTTTTCAC
TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA AGGCGGATGA
TGGTACGGCG TTTGATAATC 151 GGCATCAGCG GGGCGAGCGG TTTCCAATAC
GGCGTGAAGG CTTTGGAACT 201 TTTGCGCGCG CAAGATGTCG AAACGCACCT
TGTGGTATCG AAAGGTGCGG 251 AGATGGCGCG CGCTTCGGAA ACGGCTTATG
CGAGAGACGA GGTATATGCC 301 TTGGCGGACT TCGTGCATCC GATCGGCAAT
ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGATG GGATGCTGGT
CGCCCCCTGT TCGATGCGGA 401 CGCTTGCCTC TGTCGCGCAC GGCTTCGGCG
ACAATCTGCT GACGCGTGCG 451 GCGGATGTGG TTTTGAAGGA AAGGCGGCGG
CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC ATTTGGACAA
TATGAAGCGG GTAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC CCTGTTCCTG
CGATGTACCG CAAACCGCAG 601 ACGGCGGACG ACATAGTGGC GCACAGTGTT
GCACACGCTT TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT CGGCGGAATG
GCAGGGAATG GCGGATTAA
This corresponds to the amino acid sequence <SEQ ID 1286; ORF
308-1>:
TABLE-US-01589 m308-1.pep 1 MLNRVFYRIL GVADNLYPRL SDFCFFTIIA
GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALELLRA QDVETHLVVS
KGAEMARASE TAYARDEVYA 101 LADFVHPIGN IGACIASGTF KTDGMLVAPC
SMRTLASVAH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL NLAHLDNMKR
VTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSV AHALSLFGID TPDSAEWQGM AD*
m308-1/g308-1 97.0% identity in 232 aa overlap 10 20 30 40 50 60
m308-1.pep
MLNRVFYRILGVADNLYPRLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g308-1
MLNRVFYRILGVADNLYPCLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY 10 20
30 40 50 60 70 80 90 100 110 120 m308-1.pep
GVKALELLRAQDVETHLVVSKGAEMARASETAYARDEVYALADFVHPIGNIGACIASGTF
||||||||||||||||||||||||||||||| |::||||||||||||||||||||||||| g308-1
GVKALELLRAQDVETHLVVSKGAEMARASETDYTKDEVYALADFVHPIGNIGACIASGTF 70 80
90 100 110 120 130 140 150 160 170 180 m308-1.pep
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g308-1
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR 130
140 150 160 170 180 190 200 210 220 230 m308-1.pep
VTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMADX
|||||||||||||||||||||||||||||:||:|||||||||| ||||||||| g308-1
VTEMGGVVFPPVPAMYRKPQTADDIVAHSIAHTLSLFGIDTPDLAEWQGMADX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1287>:
TABLE-US-01590 a308-1.seq 1 ATGTTAAATC GGATATTTTA TCGGATATTG
GGTGTTGCCG ACAATTTGTA 51 TCCGTATTTA TCGGATTTCT GTTTTTTCAC
TATAATAGCC GGTTTGCCGT 101 TGCAGGCGGT TTTATGGGAA AGGCGGATGA
TGGTACGGCG TTTGATAATC 151 GGCATCAGTG GGGCGAGCGG TTTCCAATAC
GGCGTGAAGG CTTTGGANCT 201 TTTACGCGCG CAAGATATCG AAACGCACCT
TGTGGTATCG AAAGGTGCGG 251 AGATGGCGCG CGCTTCGGAA ACGGNTTATG
CGAGAGACGA NGTATATGCC 301 TTGGCGGACT TNGTGCATCC GATCGGCAAT
ATCGGGGCGT GCATTGCCAG 351 CGGTACGTTT AAAACGGACG GGATGCTGGT
CGCCCCCTGT TCGATGCGGA 401 CGCTTGCCTC GGTCGTGCAC GGCTTCGGCG
ACAACCTCTT GACGCGTGCG 451 GCGGATGTGG TTTTGAAGGA AAGGCGGCGG
CTGGTGCTGA TGGTGCGCGA 501 AACGCCGCTG AACCTTGCCC ATTTGGACAA
TATGAANCGG GTAACGGAAA 551 TGGGCGGCGT GGTGTTTCCC CCTGTTCCTG
CGATGTACCG CAAACCGCAG 601 ACGGCGGACG ACATAGTGGC GCACAGTGTT
GCACACGCTT TGTCGCTGTT 651 CGGAATCGAT ACGCCGGATT CGGCGGAATG
GCAGGGAATG GCGGATTAA
This corresponds to the amino acid sequence <SEQ ID 1288; ORF
308-1.a>:
TABLE-US-01591 a308-1.pep 1 MLNRIFYRIL GVADNLYPYL SDFCFFTIIA
GLPLQAVLWE RRMMVRRLII 51 GISGASGFQY GVKALXLLRA QDIETHLVVS
KGAEMARASE TXYARDXVYA 101 LADXVHPIGN IGACIASGTF KTDGMLVAPC
SMRTLASVVH GFGDNLLTRA 151 ADVVLKERRR LVLMVRETPL NLAHLDNMXR
VTEMGGVVFP PVPAMYRKPQ 201 TADDIVAHSV AHALSLFGID TPDSAEWQGM AD*
a308-1/m308-1 96.1% identity in 232 aa overlap 10 20 30 40 50 60
a308-1 MLNRIFYRILGVADNLYPYLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY
||||:||||||||||||| ||||||||||||||||||||||||||||||||||||||||| m308-1
MLNRVFYRILGVADNLYPRLSDFCFFTIIAGLPLQAVLWERRMMVRRLIIGISGASGFQY 10 20
30 40 50 60 70 80 90 100 110 120 a308-1
GVKALXLLRAQDIETHLVVSKGAEMARASETXYARDXVYALADXVHPIGNIGACIASGTF |||||
||||||:|||||||||||||||||| |||| |||||| |||||||||||||||| m308-1
GVKALELLRAQDVETHLVVSKGAEMARASETAYARDEVYALADFVHPIGNIGACIASGTF 70 80
90 100 110 120 130 140 150 160 170 180 a308-1
KTDGMLVAPCSMRTLASVVHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMXR
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| | m308-1
KTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKR 130
140 150 160 170 180 190 200 210 220 230 a308-1
VTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMADX
||||||||||||||||||||||||||||||||||||||||||||||||||||| m308-1
VTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDSAEWQGMADX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1289>:
TABLE-US-01592 g311.seq 1 atgttcagtt tcggctgggc gtttgaccgc
ccgcagtatg agttgggttc 51 gctgtcgcct gttgcggcac ttgcgtgccg
gcgcgctttg gggtgtttgg 101 gtttggaaac gcaaatcaag tggccaaacg
atttggtcgt cggacgcgac 151 aaattgggcg gcattctgat tgaaacagtc
agggcgggcg gtaaaacggt 201 tgccgtggtc ggtatcggca tcaatttcgt
gctgcccaag gaagtggaaa 251 acgccgcttc cgtgcagtcg ctgtttcaga
cggcatcgcg gcggggcaat 301 gccgatgccg ccgtattgct ggaaacattg
cttgcggaac tgggcgcggt 351 gttggaacaa tatgcggaag aagggttcgc
gccattttta aatgagtatg 401 aaacggccaa ccgcgaccac ggcaaggcgg
tattgctgtt gcgcgacggc 451 gaaaccgtgt gcgaaggcac ggttaaaggc
gtggacggac gaggcgttct 501 gcacttggaa acggcagaag gcgaacagac
ggtcgtcagc ggcgaaatca 551 gcctgcggcc cgacaacagg tcggtttccg
tgccgaagcg gccggattcg 601 gaacgttttt tgctgttgga aggcgggaac
agccggctca agtgggcgtg 651 ggtggaaaac ggcacgttcg caaccgtggg
cagcgcgccg taccgcgatt 701 tgtcgccttt gggcgcggag tgggcggaaa
aggcggatgg aaatgtccgc 751 atcgtcggtt gcgccgtgtg cggagaatcc
aaaaaggcac aagtgaagga 801 acagctcgcc cgaaaaatcg agtggctgcc
gtcttccgca caggctttgg 851 gcatacgcaa ccactaccgc caccccgaag
aacacggttc cgaccgttgg 901 ttcaacgcct tgggcagccg ccgcttcagc
cgcaacgcct gcgtcgtcgt 951 cagttgcggc acggcggtaa cggttgacgc
gctcaccgat gacggacatt 1001 atctcggcgg aaccatcatg cccggcttcc
acctgatgaa agaatcgctc 1051 gccgtccgaa ccgccaacct caaccgcccc
gccggcaaac gttacccttt 1101 cccgaccaca acgggcaacg ccgtcgcaag
cggcatgatg gacgcggttt 1151 gcggctcgat aatgatgatg cacggccgtt
tgaaagaaaa aaacggcgcg 1201 ggcaagcctg tcgatgtcat cattaccggc
ggcggcgcgg cgaaagtcgc 1251 cgaagccctg ccgcctgcat ttttggcgga
aaataccgtg cgcgtggcgg 1301 acaacctcgt catccacggg ctgctgaacc
tgattgccgc cgaaggcggg 1351 gaatcggaac acgcttaa
This corresponds to the amino acid sequence <SEQ ID 1290; ORF
311.ng>:
TABLE-US-01593 g311.pep 1 MFSFGWAFDR PQYELGSLSP VAALACRRAL
GCLGLETQIK WPNDLVVGRD 51 KLGGILIETV RAGGKTVAVV GIGINFVLPK
EVENAASVQS LFQTASRRGN 101 ADAAVLLETL LAELGAVLEQ YAEEGFAPFL
NEYETANRDH GKAVLLLRDG 151 ETVCEGTVKG VDGRGVLHLE TAEGEQTVVS
GEISLRPDNR SVSVPKRPDS 201 ERFLLLEGGN SRLKWAWVEN GTFATVGSAP
YRDLSPLGAE WAEKADGNVR 251 IVGCAVCGES KKAQVKEQLA RKIEWLPSSA
QALGIRNHYR HPEEHGSDRW 301 FNALGSRRFS RNACVVVSCG TAVTVDALTD
DGHYLGGTIM PGFHLMKESL 351 AVRTANLNRP AGKRYPFPTT TGNAVASGMM
DAVCGSIMMM HGRLKEKNGA 401 GKPVDVIITG GGAAKVAEAL PPAFLAENTV
RVADNLVIHG LLNLIAAEGG 451 ESEHA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1291>:
TABLE-US-01594 m311.seq (partial) 1 ATGTTCAGTT TTGGCTGGGT
GTTTGACCGG CCGCAGTATG AGTTGGGTTC 51 GCTGTCGCCT GTTGCGGCAG
TGGCGTGTCG GCGCGCCTTG TCGCGTTTAG 101 GTTTGGATGT GCArATTAAG
TGGCCCAATG ATTTGGTTGT CGGACGCGAC 151 AAATTGGGCG GCATTCTGAT
TGAAACGGTC AGGACGGGCG GCAAAACGGT 201 TGCCGTGGTC GGTATCGGCA
TCAATTTTGT CCTGCCCAAn GAAGTAGAAA 251 ATGCCGCTTC CGTGCAATCG
CTGTTTCAGA CGGCATCGCG GCGGGGCAAT 301 GCCGATGCCG CCGTGCTGCT
nnnnnnnnnn nnnnnnnnnn nnnnGGAAAT 351 CAGCCTGCGG TCCGACnACA
GGCCGGTTTC CGTGnCGAAG CGGCGGGATT 401 CGGAACGTTT TCTGCTGTTG
GACGGCGGCA ACAGCCGGCT CAAGTGGgCG 451 TGGGTGGAAA ACGGCACGTT
CGCAACCGTC GGTAGCGCGC CGTACCgCGA 501 TTTGTCGCCT TTGGGCGCGG
AGTGGGCGGA AAAGGCGGAT GGAAATGTCC 551 GCATCGTCGG TTGCGCTGTG
TGCGGAGAAT TCAAAAAGGC ACAAGTGCAG 601 GAACAGCTCG CCCGAAAAAT
CGAGTGGCTG CCGTCTTCCG CACAGGCTTT 651 GTTTGGCATA CGCAACCACT
ACCGCCACCC CGAAGAACAC GGTTCCGACC 701 GCTGGTTCAA CGCCTTGGGC
AGCCGCCGCT TCAGCCGCAA CGCyTGCGTC 751 GTCGTCAGTT GCGGCACGGC
GGTAACGGTT GACGCGCTCA CCGATGACGG 801 ACATTATCTC GGrgGAACCA
TCATGCCCGG TTTCCACCTG ATGAAAGAAT 851 CGCTCGCCGT CCGAACCGCC
AACCTCAACC GGCACGCCGG TAAGCGTTAT 901 CCTTTCCCGA CCACAACGGG
CAATGCCGTC GCCAGCGGCA TGATGGATGC 951 GGTTTGCGGC TCGGTTATGA
TGATGCACGG GCGTTTGAAA GAAAAAACCG 1001 GGGCGGGCAA GCCTGTCGAT
GTCATCATTA CCGGCGGCGG CGCGGCAAAA 1051 GTTGCCGAAG CCCTGCCGCC
TGCATTTTTG GCGGAAAATA CCGTGCGCGT 1101 GGCGGACAAC CTCGTCATTT
ACGGGTTGTT GAACATGATT GCCGCCGAAG 1151 GCAGGGAATA TGAACAT....
This corresponds to the amino acid sequence <SEQ ID 1292; ORF
311>:
TABLE-US-01595 m311.pep (partial) 1 MFSFGWVFDR PQYELGSLSP
VAAVACRRAL SRLGLDVQIK WPNDLVVGRD 51 KLGGILIETV RTGGKTVAVV
GIGINFVLPX EVENAASVQS LFQTASRRGN 101 ADAAVLLXXX XXXXXEISLR
SDXRPVSVXK RRDSERFLLL DGGNSRLKWA 151 WVENGTFATV GSAPYRDLSP
LGAEWAEKAD GNVRIVGCAV CGEFKKAQVQ 201 EQLARKIEWL PSSAQALFGI
RNHYRHPEEH GSDRWFNALG SRRFSRNACV 251 VVSCGTAVTV DALTDDGHYL
GGTIMPGFHL MKESLAVRTA NLNRHAGKRY 301 PFPTTTGNAV ASGMMDAVCG
SVMMMHGRLK EKTGAGKPVD VIITGGGAAK 351 VAEALPPAFL AENTVRVADN
LVIYGLLNMI AAEGREYEH....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 311
shows 78.5% identity over a 455 aa overlap with a predicted ORF
(ORF 311.ng) from N. gonorrhoeae:
TABLE-US-01596 m311/g311 10 20 30 40 50 60 m311.pep
MFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETV
||||||:||||||||||||||||:||||||: |||::||||||||||||||||||||||| g311
MFSFGWAFDRPQYELGSLSPVAALACRRALGCLGLETQIKWPNDLVVGRDKLGGILIETV 10 20
30 40 50 60 70 80 90 100 110 m311.pep
RAGGKTVAVVGIGINFVLPXEVENAASVQSLFQTASRRGNADAAVLLXXX----------
|:||||||||||||||||| ||||||||||||||||||||||||||| : g311
RAGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQ 70 80
90 100 110 120 m311.pep
--------------------------------------------------------XXXX : g311
YAEEGFAPFLNEYETANRDHGKAVLLLRDGETVCEGTVKGVDGRGVLHLETAEGEQTVVS 130
140 150 160 170 180 120 130 140 150 160 170 m311.pep
XEISLRSDXRPVSVXKRRDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAE |||||
| | ||| || ||||||||:||||||||||||||||||||||||||||||||| g311
GEISLRPDNRSVSVPKRPDSERFLLLEGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAE 190
200 210 220 230 240 180 190 200 210 220 230 m311.pep
WAEKADGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQALFGIRNHYRHPEEHGSDR
||||||||||||||||||| |||||:||||||||||||||||| |||||||||||||||| g311
WAEKADGNVRIVGCAVCGESKKAQVKEQLARKIEWLPSSAQAL-GIRNHYRHPEEHGSDR 250
260 270 280 290 240 250 260 270 280 290 m311.pep
WFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g311
WFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNR 300
310 320 330 340 350 300 310 320 330 340 350 m311.pep
HAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEA
||||||||||||||||||||||||||:||||||||||:||||||||||||||||||||| g311
PAGKRYPFPTTTGNAVASGMMDAVCGSIMMMHGRLKEKNGAGKPVDVIITGGGAAKVAEA 360
370 380 390 400 410 360 370 380 389 m311.pep
LPPAFLAENTVRVADNLVIYGLLNMIAAEGREYEH |||||||||||||||||||:||||:|||||
| || g311 LPPAFLAENTVRVADNLVIHGLLNLIAAEGGESEHAX 420 430 440 450
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1293>:
TABLE-US-01597 a311.seq 1 ATGTTCAGTT TTGGCTGGGT GTTTGACCGG
CCGCAGTATG AGTTGGGTTC 51 GCTGTCGCCT GTTGCGGCAG TGGCGTGCCG
GCGCGCCTTG TCGCGTTTGG 101 GTTTGAAAAC GCAAATCAAG TGGCCAAACG
ATTTGGTCGT CGGACGCGAC 151 AAATTGGGCG GCATTCTGAT TGAAACGGTC
AGGACGGGCG GCAAAACGGT 201 TGCCGTGGTC GGTATCGGCA TCAATTTCGT
GCTGCCCAAG GAAGTGGAAA 251 ACGCCGCTTC CGTGCAATCG CTGTTTCAGA
CGGCATCGCG GCGGGGAAAT 301 GCCGATGCCG CCGTGTTGCT GGAAACGCTG
TTGGCGGAAC TTGATGCGGT 351 GTTGTTGCAA TATGCGCGGG ACGGATTTGC
GCCTTTTGTG GCGGAATATC 401 AGGCTGCCAA CCGCGACCAC GGCAAGGCGG
TATTGCTGTT GCGCGACGGC 451 GAAACCGTGT TCGAAGGCAC GGTTAAAGGC
GTGGACGGAC AAGGCGTTCT 501 GCACTTGGAA ACGGCAGAGG GCAAACAGAC
GGTCGTCAGC GGCGAAATCA 551 GCCTGCGGTC CGACGACAGG CCGGTTTCCG
TGCCGAAGCG GCGGGATTCG 601 GAACGTTTTC TGCTGTTGGA CGGCGGCAAC
AGCCGGCTCA AGTGGGCGTG 651 GGTGGAAAAC GGCACGTTCG CAACCGTCGG
TAGCGCGCCG TACCGCGATT 701 TGTCGCCTTT GGGCGCGGAG TGGGCGGAAA
AGGTGGATGG AAATGTCCGC 751 ATCGTCGGTT GCGCCGTGTG CGGAGAATTC
AAAAAGGCAC AAGTGCAGGA 801 ACAGCTCGCC CGAAAAATCG AGTGGCTGCC
GTCTTCCGCA CAGGCTTTGG 851 GCATACGCAA CCACTACCGC CACCCCGAAG
AACACGGTTC CGACCGCTGG 901 TTCAACGCCT TGGGCAGCCG CCGCTTCAGC
CGCAACGCCT GCGTCGTCGT 951 CAGTTGCGGC ACGGCGGTAA CGGTTGACGC
GCTCACCGAT GACGGACATT 1001 ATCTCGGGGG AACCATCATG CCCGGTTTCC
ACCTGATGAA AGAATCGCTC 1051 GCCGTCCGAA CCGCCAACCT CAACCGGCAC
GCCGGTAAGC GTTATCCTTT 1101 CCCGACCACA ACGGGCAATG CCGTCGCCAG
CGGCATGATG GATGCGGTTT 1151 GCGGCTCGGT TATGATGATG CACGGGCGTT
TGAAAGAAAA AACCGGGGCG 1201 GGCAAGCCTG TCGATGTCAT CATTACCGGC
GGCGGCGCGG CAAAAGTTGC 1251 CGAAGCCCTG CCGCCTGCAT TTTTGGCGGA
AAATACCGTG CGCGTGGCGG 1301 ACAACCTCGT CATTCACGGG CTGCTGAACC
TGATTGCCGC CGAAGGCGGG 1351 GAATCGGAAC ATACTTAA
This corresponds to the amino acid sequence <SEQ ID 1294; ORF
311.a>:
TABLE-US-01598 a311.pep 1 MFSFGWVFDR PQYELGSLSP VAAVACRRAL
SRLGLKTQIK WPNDLVVGRD 51 KLGGILIETV RTGGKTVAVV GIGINFVLPK
EVENAASVQS LFQTASRRGN 101 ADAAVLLETL LAELDAVLLQ YARDGFAPFV
AEYQAANRDH GKAVLLLRDG 151 ETVFEGTVKG VDGQGVLHLE TAEGKQTVVS
GEISLRSDDR PVSVPKRRDS 201 ERFLLLDGGN SRLKWAWVEN GTFATVGSAP
YRDLSPLGAE WAEKVDGNVR 251 IVGCAVCGEF KKAQVQEQLA RKIEWLPSSA
QALGIRNHYR HPEEHGSDRW 301 FNALGSRRFS RNACVVVSCG TAVTVDALTD
DGHYLGGTIM PGFHLMKESL 351 AVRTANLNRH AGKRYPFPTT TGNAVASGMM
DAVCGSVMMM HGRLKEKTGA 401 GKPVDVIITG GGAAKVAEAL PPAFLAENTV
RVADNLVIHG LLNLIAAEGG 451 ESEHT* m311/a311 81.3% identity in 455 aa
overlap 10 20 30 40 50 60 m311.pep
MFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETV
||||||||||||||||||||||||||||||||||| :||||||||||||||||||||||| a311
MFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLKTQIKWPNDLVVGRDKLGGILIETV 10 20
30 40 50 60 70 80 90 100 110 m311.pep
RTGGKTVAVVGIGINFVLPXEVENAASVQSLFQTASRRGNADAAVLLXXXXXXXX-----
||||||||||||||||||| ||||||||||||||||||||||||||| : a311
RTGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQ 70 80
90 100 110 120 m311.pep
------------------------------------------------------------ a311
YARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVS 130
140 150 160 170 180 120 130 140 150 160 170 m311.pep
-EISLRSDXRPVSVXKRRDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAE
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| a311
GEISLRSDDRPVSVPKRRDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAE 190
200 210 220 230 240 180 190 200 210 220 230 m311.pep
WAEKADGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQALFGIRNHYRHPEEHGSDR
||||:|||||||||||||||||||||||||||||||||||||| |||||||||||||||| a311
WAEKVDGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQAL-GIRNHYRHPEEHGSDR 250
260 270 280 290 240 250 260 270 280 290 m311.pep
WFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a311
WFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNR 300
310 320 330 340 350 300 310 320 330 340 350 m311.pep
HAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a311
HAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEA 360
370 380 390 400 410 360 370 380 389 m311.pep
LPPAFLAENTVRVADNLVIYGLLNMIAAEGREYEH |||||||||||||||||||:||||:|||||
| || a311 LPPAFLAENTVRVADNLVIHGLLNLIAAEGGESEHTX 420 430 440 450
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1295>:
TABLE-US-01599 g311-1.seq 1 ATGACGGTTT TGAAGCCTTC GCATTGGCGG
GTGTTGGCGG AGCTTGCCGA 51 CGGTTTGCCG CAACACGTAT CGCAATTGGC
GCGTGAGGCG GACATGAAGC 101 CGCAGCAGCT CAACGGTTTT TGGCAGCAGA
TGCCGGCGCA TATACGCGGG 151 CTGTTGCGCC AACACGACGG CTATTGGCGG
CTGGTGCGCC CCTTGGCGGT 201 TTTCGATGCC GAAGGTTTGC GCGATCTGGG
GGAAAGGTCG GGTTTTCAGA 251 CGGCATTGAA GCACGAGTGC GCGTCCAGCA
ACGACGAGAT ACTGGAATTG 301 GCGCGGATTG CGCCGGACAA GGCGCACAAA
ACCATATGCG TGACCCACCT 351 GCAAAGTAAG GGCAGGGGGC GGCAGGGGCG
GAAGTGGTCG CACCGTTTGG 401 GCGAGTGCCT GATGTTCAGT TTCGGCTGGG
CGTTTGACCG GCCGCAGTAT 451 GAGTTGGGTT CGCTGTCGCC TGTTGCGGCA
CTTGCGTGCC GGCGCGCTTT 501 GGGGTGTTTG GGTTTGGAAA CGCAAATCAA
GTGGCCAAAC GATTTGGTCG 551 TCGGACGCGA CAAATTGGGC GGCATTCTGA
TTGAAACAGT CAGGGCGGGC 601 GGTAAAACGG TTGCCGTGGT CGGTATCGGC
ATCAATTTCG TGCTGCCCAA 651 GGAAGTGGAA AACGCCGCTT CCGTGCAGTC
GCTGTTTCAG ACGGCATCGC 701 GGCGGGGCAA TGCCGATGCC GCCGTATTGC
TGGAAACATT GCTTGCGGAA 751 CTGGGCGCGG TGTTGGAACA ATATGCGGAA
GAAGGGTTCG CGCCATTTTT 801 AAATGAGTAT GAAACGGCCA ACCGCGACCA
CGGCAAGGCG GTATTGCTGT 851 TGCGCGACGG CGAAACCGTG TGCGAAGGCA
CGGTTAAAGG CGTGGACGGA 901 CGAGGCGTTC TGCACTTGGA AACGGCAGaa
ggCGAACAGa cggtcGtcag 951 cggcGaaaTC AGccTGCGGc CCGacaacag
gtcggtttcc GTgccgaagc 1001 gGccggatTC GgaacgttTT tTGCTgttgg
aaggcgggaa cagccggctc 1051 aAGTGGgcgt gGGTggAAAA Cggcacgttc
gcaaccgtgg gcAGCGCgCC 1101 gtaCCGCGAT TTGTCGCCTT TGGGCGCGGA
GTGGGCGGAA AAGGCGGATG 1151 GAAATGTCCG CATCGTCGGT TGCGCCGTGT
GCGGAGAATC CAAAAAGGCA 1201 CAAGTGAAGG AACAGCTCGC CCGAAAAATC
GAGTGGCTGC CGTCTTCCGC 1251 ACAGGCTTTG GGCATACGCA ACCACTACCG
CCACCCCGAA GAACACGGTT 1301 CCGACCGTTG GTTCAACGCC TTGGGCAGCC
GCCGCTTCAG CCGCAACGCC 1351 TGCGTCGTCG TCAGTTGCGG CACGGCGGTA
ACGGTTGACG CGCTCACCGA 1401 TGACGGACAT TATCTCGGCG GAACCATCAT
GCCCGGCTTC CACCTGATGA 1451 AAGAATCGCT CGCCGTCCGA ACCGCCAACC
TCAACCGCCC CGCCGGCAAA 1501 CGTTACCCTT TCCCGACCAC AACGGGCAAC
GCCGTCGCAA GCGGCATGAT 1551 GGACGCGGTT TGCGGCTCGA TAATGATGAT
GCACGGCCGT TTGAAAGAAA 1601 AAAACGGCGC GGGCAAGCCT GTCGATGTCA
TCATTACCGG CGGCGGCGCG 1651 GCGAAAGTCG CCGAAGCCCT GCCGCCTGCA
TTTTTGGCGG AAAATACCGT 1701 GCGCGTGGCG GACAACCTCG TCATCCACGG
GCTGCTGAAC CTGATTGCCG 1751 CCGAAGGCGG GGAATCGGAA CACGCTTAA
This corresponds to the amino acid sequence <SEQ ID 1296; ORF
311-1.ng>:
TABLE-US-01600 g311-1.pep 1 MTVLKPSHWR VLAELADGLP QHVSQLAREA
DMKPQQLNGF WQQMPAHIRG 51 LLRQHDGYWR LVRPLAVFDA EGLRDLGERS
GFQTALKHEC ASSNDEILEL 101 ARIAPDKAHK TICVTHLQSK GRGRQGRKWS
HRLGECLMFS FGWAFDRPQY 151 ELGSLSPVAA LACRRALGCL GLETQIKWPN
DLVVGRDKLG GILIETVRAG 201 GKTVAVVGIG INFVLPKEVE NAASVQSLFQ
TASRRGNADA AVLLETLLAE 251 LGAVLEQYAE EGFAPFLNEY ETANRDHGKA
VLLLRDGETV CEGTVKGVDG 301 RGVLHLETAE GEQTVVSGEI SLRPDNRSVS
VPKRPDSERF LLLEGGNSRL 351 KWAWVENGTF ATVGSAPYRD LSPLGAEWAE
KADGNVRIVG CAVCGESKKA 401 QVKEQLARKI EWLPSSAQAL GIRNHYRHPE
EHGSDRWFNA LGSRRFSRNA 451 CVVVSCGTAV TVDALTDDGH YLGGTIMPGF
HLMKESLAVR TANLNRPAGK 501 RYPFPTTTGN AVASGMMDAV CGSIMMMHGR
LKEKNGAGKP VDVIITGGGA 551 AKVAEALPPA FLAENTVRVA DNLVIHGLLN
LIAAEGGESE HA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1297>:
TABLE-US-01601 m311-1.seq 1 ATGACGGTTT TGAAGCTTTC GCACTGGCGG
GTGTTGGCGG AGCTTGCCGA 51 CGGTTTGCCG CAACACGTCT CGCAACTGGC
GCGTATGGCG GATATGAAGC 101 CGCAGCAGCT CAACGGTTTT TGGCAGCAGA
TGCCGGCGCA CATACGCGGG 151 CTGTTGCGCC AACACGACGG CTATTGGCGG
CTGGTGCGCC CATTGGCGGT 201 TTTCGATGCC GAAGGTTTGC GCGAGCTGGG
GGAAAGGTCG GGTTTTCAGA 251 CGGCATTGAA GCACGAGTGC GCGTCCAGCA
ACGACGAGAT ACTGGAATTG 301 GCGCGGATTG CGCCGGACAA GGCGCACAAA
ACCATATGCG TGACCCACCT 351 GCAAAGTAAG GGCAGGGGGC GGCAGGGGCG
GAAGTGGTCG CACCGTTTGG 401 GCGAGTGTCT GATGTTCAGT TTTGGCTGGG
TGTTTGACCG GCCGCAGTAT 451 GAGTTGGGTT CGCTGTCGCC TGTTGCGGCA
GTGGCGTGTC GGCGCGCCTT 501 GTCGCGTTTA GGTTTGGATG TGCAGATTAA
GTGGCCCAAT GATTTGGTTG 551 TCGGACGCGA CAAATTGGGC GGCATTCTGA
TTGAAACGGT CAGGACGGGC 601 GGCAAAACGG TTGCCGTGGT CGGTATCGGC
ATCAATTTTG TCCTGCCCAA 651 GGAAGTAGAA AATGCCGCTT CCGTGCAATC
GCTGTTTCAG ACGGCATCGC 701 GGCGGGGCAA TGCCGATGCC GCCGTGCTGC
TGGAAACGCT GTTGGTGGAA 751 CTGGACGCGG TGTTGTTGCA ATATGCGCGG
GACGGATTTG CGCCTTTTGT 801 GGCGGAATAT CAGGCTGCCA ACCGCGACCA
CGGCAAGGCG GTATTGCTGT 851 TGCGCGACGG CGAAACCGTG TTCGAAGGCA
CGGTTAAAGG CGTGGACGGA 901 CAAGGCGTTT TGCACTTGGA AACGGCAGAG
GGCAAACAGA CGGTCGTCAG 951 CGGCGAAATC AGCCTGCGGT CCGACGACAG
GCCGGTTTCC GTGCCGAAGC 1001 GGCGGGATTC GGAACGTTTT CTGCTGTTGG
ACGGCGGCAA CAGCCGGCTC 1051 AAGTGGGCGT GGGTGGAAAA CGGCACGTTC
GCAACCGTCG GTAGCGCGCC 1101 GTACCGCGAT TTGTCGCCTT TGGGCGCGGA
GTGGGCGGAA AAGGCGGATG 1151 GAAATGTCCG CATCGTCGGT TGCGCTGTGT
GCGGAGAATT CAAAAAGGCA 1201 CAAGTGCAGG AACAGCTCGC CCGAAAAATC
GAGTGGCTGC CGTCTTCCGC 1251 ACAGGCTTTG GGCATACGCA ACCACTACCG
CCACCCCGAA GAACACGGTT 1301 CCGACCGCTG GTTCAACGCC TTGGGCAGCC
GCCGCTTCAG CCGCAACGCC 1351 TGCGTCGTCG TCAGTTGCGG CACGGCGGTA
ACGGTTGACG CGCTCACCGA 1401 TGACGGACAT TATCTCGGGG GAACCATCAT
GCCCGGTTTC CACCTGATGA 1451 AAGAATCGCT CGCCGTCCGA ACCGCCAACC
TCAACCGGCA CGCCGGTAAG 1501 CGTTATCCTT TCCCGACCAC AACGGGCAAT
GCCGTCGCCA GCGGCATGAT 1551 GGATGCGGTT TGCGGCTCGG TTATGATGAT
GCACGGGCGT TTGAAAGAAA 1601 AAACCGGGGC GGGCAAGCCT GTCGATGTCA
TCATTACCGG CGGCGGCGCG 1651 GCAAAAGTTG CCGAAGCCCT GCCGCCTGCA
TTTTTGGCGG AAAATACCGT 1701 GCGCGTGGCG GACAACCTCG TCATTTACGG
GTTGTTGAAC ATGATTGCCG 1751 CCGAAGGCAG GGAATATGAA CATATTTAA
This corresponds to the amino acid sequence <SEQ ID 1298; ORF
311-1>:
TABLE-US-01602 m311-1.pep 1 MTVLKLSHWR VLAELADGLP QHVSQLARMA
DMKPQQLNGF WQQMPAHIRG 51 LLRQHDGYWR LVRPLAVFDA EGLRELGERS
GFQTALKHEC ASSNDEILEL 101 ARIAPDKAHK TICVTHLQSK GRGRQGRKWS
HRLGECLMFS FGWVFDRPQY 151 ELGSLSPVAA VACRRALSRL GLDVQIKWPN
DLVVGRDKLG GILIETVRTG 201 GKTVAVVGIG INFVLPKEVE NAASVQSLFQ
TASRRGNADA AVLLETLLVE 251 LDAVLLQYAR DGFAPFVAEY QAANRDHGKA
VLLLRDGETV FEGTVKGVDG 301 QGVLHLETAE GKQTVVSGEI SLRSDDRPVS
VPKRRDSERF LLLDGGNSRL 351 KWAWVENGTF ATVGSAPYRD LSPLGAEWAE
KADGNVRIVG CAVCGEFKKA 401 QVQEQLARKI EWLPSSAQAL GIRNHYRHPE
EHGSDRWFNA LGSRRFSRNA 451 CVVVSCGTAV TVDALTDDGH YLGGTIMPGF
HLMKESLAVR TANLNRHAGK 501 RYPFPTTTGN AVASGMMDAV CGSVMMMHGR
LKEKTGAGKP VDVIITGGGA 551 AKVAEALPPA FLAENTVRVA DNLVIYGLLN
MIAAEGREYE HI* m311-1/g311-1 93.9% identity in 591 aa overlap 10 20
30 40 50 60 m311-1.pep
MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQMPAHIRGLLRQHDGYWR |||||
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| g311-1
MTVLKPSHWRVLAELADGLPQHVSQLAREADMKPQQLNGFWQQMPAHIRGLLRQHDGYWR 10 20
30 40 50 60 70 80 90 100 110 120 m311-1.pep
LVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSK
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| g311-1
LVRPLAVFDAEGLRDLGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSK 70 80
90 100 110 120 130 140 150 160 170 180 m311-1.pep
GRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLDVQIKWPN
|||||||||||||||||||||||:||||||||||||||||:||||||: |||::|||||| g311-1
GRGRQGRKWSHRLGECLMFSFGWAFDRPQYELGSLSPVAALACRRALGCLGLETQIKWPN 130
140 150 160 170 180 190 200 210 220 230 240 m311-1.pep
DLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADA
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| g311-1
DLVVGRDKLGGILIETVRAGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADA 190
200 210 220 230 240 250 260 270 280 290 300 m311-1.pep
AVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEGTVKGVDG
||||||||:|| ||| |||::|||||: ||::|||||||||||||||||| ||||||||| g311-1
AVLLETLLAELGAVLEQYAEEGFAPFLNEYETANRDHGKAVLLLRDGETVCEGTVKGVDG 250
260 270 280 290 300 310 320 330 340 350 360 m311-1.pep
QGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKRRDSERFLLLDGGNSRLKWAWVENGTF
:||||||||||:||||||||||| |:| |||||| ||||||||:|||||||||||||||| g311-1
RGVLHLETAEGEQTVVSGEISLRPDNRSVSVPKRPDSERFLLLEGGNSRLKWAWVENGTF 310
320 330 340 350 360 370 380 390 400 410 420 m311-1.pep
ATVGSAPYRDLSPLGAEWAEKADGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQAL
|||||||||||||||||||||||||||||||||||| |||||:||||||||||||||||| g311-1
ATVGSAPYRDLSPLGAEWAEKADGNVRIVGCAVCGESKKAQVKEQLARKIEWLPSSAQAL 370
380 390 400 410 420 430 440 450 460 470 480 m311-1.pep
GIRNHYRHPEEHGSDRWFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g311-1
GIRNHYRHPEEHGSDRWFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGF 430
440 450 460 470 480 490 500 510 520 530 540 m311-1.pep
HLMKESLAVRTANLNRHAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKP
|||||||||||||||| ||||||||||||||||||||||||||:||||||||||:||||| g311-1
HLMKESLAVRTANLNRPAGKRYPFPTTTGNAVASGMMDAVCGSIMMMHGRLKEKNGAGKP 490
500 510 520 530 540 550 560 570 580 590 m311-1.pep
VDVIITGGGAAKVAEALPPAFLAENTVRVADNLVIYGLLNMIAAEGREYEHIX
|||||||||||||||||||||||||||||||||||:||||:||||| | || g311-1
VDVIITGGGAAKVAEALPPAFLAENTVRVADNLVIHGLLNLIAAEGGESEHAX 550 560 570
580 590
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1299>:
TABLE-US-01603 a311-1.seq 1 ATGACGGTTT TGAAGCCTTC GCACTGGCGG
GTGTTGGCGG AGCTTGCCGA 51 CGGTTTGCCG CAACACGTCT CGCAACTGGC
GCGTATGGCG GATATGAAGC 101 CGCAGCAGCT CAACGGTTTT TGGCAGCAGA
TGCCGGCGCA CATACGCGGG 151 CTGTTGCGCC AACACGACGG CTATTGGCGG
CTGGTGCGCC CATTGGCGGT 201 TTTCGATGCC GAAGGTTTGC GCGAGCTGGG
GGAAAGGTCG GGTTTTCAGA 251 CGGCATTGAA GCACGAGTGC GCGTCCAGCA
ACGACGAGAT ACTGGAATTG 301 GCGCGGATTG CGCCGGACAA GGCGCACAAA
ACCATATGTG TGACCCACCT 351 GCAAAGTAAG GGCAGGGGGC GGCAGGGGCG
GAAGTGGTCG CACCGTTTGG 401 GCGAGTGTCT GATGTTCAGT TTTGGCTGGG
TGTTTGACCG GCCGCAGTAT 451 GAGTTGGGTT CGCTGTCGCC TGTTGCGGCA
GTGGCGTGCC GGCGCGCCTT 501 GTCGCGTTTG GGTTTGAAAA CGCAAATCAA
GTGGCCAAAC GATTTGGTCG 551 TCGGACGCGA CAAATTGGGC GGCATTCTGA
TTGAAACGGT CAGGACGGGC 601 GGCAAAACGG TTGCCGTGGT CGGTATCGGC
ATCAATTTCG TGCTGCCCAA 651 GGAAGTGGAA AACGCCGCTT CCGTGCAATC
GCTGTTTCAG ACGGCATCGC 701 GGCGGGGAAA TGCCGATGCC GCCGTGTTGC
TGGAAACGCT GTTGGCGGAA 751 CTTGATGCGG TGTTGTTGCA ATATGCGCGG
GACGGATTTG CGCCTTTTGT 801 GGCGGAATAT CAGGCTGCCA ACCGCGACCA
CGGCAAGGCG GTATTGCTGT 851 TGCGCGACGG CGAAACCGTG TTCGAAGGCA
CGGTTAAAGG CGTGGACGGA 901 CAAGGCGTTC TGCACTTGGA AACGGCAGAG
GGCAAACAGA CGGTCGTCAG 951 CGGCGAAATC AGCCTGCGGT CCGACGACAG
GCCGGTTTCC GTGCCGAAGC 1001 GGCGGGATTC GGAACGTTTT CTGCTGTTGG
ACGGCGGCAA CAGCCGGCTC 1051 AAGTGGGCGT GGGTGGAAAA CGGCACGTTC
GCAACCGTCG GTAGCGCGCC 1101 GTACCGCGAT TTGTCGCCTT TGGGCGCGGA
GTGGGCGGAA AAGGTGGATG 1151 GAAATGTCCG CATCGTCGGT TGCGCCGTGT
GCGGAGAATT CAAAAAGGCA 1201 CAAGTGCAGG AACAGCTCGC CCGAAAAATC
GAGTGGCTGC CGTCTTCCGC 1251 ACAGGCTTTG GGCATACGCA ACCACTACCG
CCACCCCGAA GAACACGGTT 1301 CCGACCGCTG GTTCAACGCC TTGGGCAGCC
GCCGCTTCAG CCGCAACGCC 1351 TGCGTCGTCG TCAGTTGCGG CACGGCGGTA
ACGGTTGACG CGCTCACCGA 1401 TGACGGACAT TATCTCGGGG GAACCATCAT
GCCCGGTTTC CACCTGATGA 1451 AAGAATCGCT CGCCGTCCGA ACCGCCAACC
TCAACCGGCA CGCCGGTAAG 1501 CGTTATCCTT TCCCGACCAC AACGGGCAAT
GCCGTCGCCA GCGGCATGAT 1551 GGATGCGGTT TGCGGCTCGG TTATGATGAT
GCACGGGCGT TTGAAAGAAA 1601 AAACCGGGGC GGGCAAGCCT GTCGATGTCA
TCATTACCGG CGGCGGCGCG 1651 GCAAAAGTTG CCGAAGCCCT GCCGCCTGCA
TTTTTGGCGG AAAATACCGT 1701 GCGCGTGGCG GACAACCTCG TCATTCACGG
GCTGCTGAAC CTGATTGCCG 1751 CCGAAGGCGG GGAATCGGAA CATACTTAA
This corresponds to the amino acid sequence <SEQ ID 1300; ORF
311-1.a>:
TABLE-US-01604 a311-1.pep 1 MTVLKPSHWR VLAELADGLP QHVSQLARMA
DMKPQQLNGF WQQMPAHIRG 51 LLRQHDGYWR LVRPLAVFDA EGLRELGERS
GFQTALKHEC ASSNDEILEL 101 ARIAPDKAHK TICVTHLQSK GRGRQGRKWS
HRLGECLMFS FGWVFDRPQY 151 ELGSLSPVAA VACRRALSRL GLKTQIKWPN
DLVVGRDKLG GILIETVRTG 201 GKTVAVVGIG INFVLPKEVE NAASVQSLFQ
TASRRGNADA AVLLETLLAE 251 LDAVLLQYAR DGFAPFVAEY QAANRDHGKA
VLLLRDGETV FEGTVKGVDG 301 QGVLHLETAE GKQTVVSGEI SLRSDDRPVS
VPKRRDSERF LLLDGGNSRL 351 KWAWVENGTF ATVGSAPYRD LSPLGAEWAE
KVDGNVRIVG CAVCGEFKKA 401 QVQEQLARKI EWLPSSAQAL GIRNHYRHPE
EHGSDRWFNA LGSRRFSRNA 451 CVVVSCGTAV TVDALTDDGH YLGGTIMPGF
HLMKESLAVR TANLNRHAGK 501 RYPFPTTTGN AVASGMMDAV CGSVMMMHGR
LKEKTGAGKP VDVIITGGGA 551 AKVAEALPPA FLAENTVRVA DNLVIHGLLN
LIAAEGGESE HT* a311-1/m311-1 98.5% identity in 591 aa overlap 10 20
30 40 50 60 a311-1.pep
MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQMPAHIRGLLRQHDGYWR |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQMPAHIRGLLRQHDGYWR 10 20
30 40 50 60 70 80 90 100 110 120 a311-1.pep
LVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
LVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSK 70 80
90 100 110 120 130 140 150 160 170 180 a311-1.pep
GRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLKTQIKWPN
|||||||||||||||||||||||||||||||||||||||||||||||||||| :|||||| m311-1
GRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAAVACRRALSRLGLDVQIKWPN 130
140 150 160 170 180 190 200 210 220 230 240 a311-1.pep
DLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
DLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADA 190
200 210 220 230 240 250 260 270 280 290 300 a311-1.pep
AVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEGTVKGVDG
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
AVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEGTVKGVDG 250
260 270 280 290 300 310 320 330 340 350 360 a311-1.pep
QGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKRRDSERFLLLDGGNSRLKWAWVENGTF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
QGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKRRDSERFLLLDGGNSRLKWAWVENGTF 310
320 330 340 350 360 370 380 390 400 410 420 a311-1.pep
ATVGSAPYRDLSPLGAEWAEKVDGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQAL
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| m311-1
ATVGSAPYRDLSPLGAEWAEKADGNVRIVGCAVCGEFKKAQVQEQLARKIEWLPSSAQAL 370
380 390 400 410 420 430 440 450 460 470 480 a311-1.pep
GIRNHYRHPEEHGSDRWFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
GIRNHYRHPEEHGSDRWFNALGSRRFSRNACVVVSCGTAVTVDALTDDGHYLGGTIMPGF 430
440 450 460 470 480 490 500 510 520 530 540 a311-1.pep
HLMKESLAVRTANLNRHAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m311-1
HLMKESLAVRTANLNRHAGKRYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKP 490
500 510 520 530 540 550 560 570 580 590 a311-1.pep
VDVIITGGGAAKVAEALPPAFLAENTVRVADNLVIHGLLNLIAAEGGESEHTX
|||||||||||||||||||||||||||||||||||:||||:||||| | || m311-1
VDVIITGGGAAKVAEALPPAFLAENTVRVADNLVIYGLLNMIAAEGREYEHIX 550 560 570
580 590
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1301>:
TABLE-US-01605 g312.seq 1 atgaGtatCc aatCcGgcga AATTTtagaa
accgtCAAAA TGGTTGCCGA 51 ccggaATttt gAtgtccgCA CCATTAccat
cggcaTTgaT ttgcacgact 101 gcatcagcac cgacatcgac gtgttaAACC
AAAACATtta caaCAaaaTc 151 accacggtcg gcaaagactT GGTGGCAacg
Gcgaaacacc tTTccgcCAA 201 ATACGGCGTG CCGATTGTGA ATCAGCGCAT
TTCCGTTACG CCGAttgccc 251 AaatcGCGGC GGcgaccaAa gccgaCAGTT
AtgtcAGCgt ggcgcAGact 301 tTGGACAAGG CAGCCAAAGC CATCGGCGTG
TCCTTTATCG GcggCTTTTC 351 CGCGCTGGTG CAAAAAGGTA TGTCGCCTTC
GGATGAGGTG TTGATCCGTT 401 CCGTTCCCGA AGCGATGAAA ACTACCGATA
TCGTGTGCAG CTCCATCAAT 451 ATCGGCAGCA CGCGTGCCGG TATCAATATG
GATGCGGTCA AGCTGGCAGG 501 CGAAACCATC AAACGCACGG CTGAAATCAC
ACCCGAAGGT TTCGGCTGCG 551 CCAAAATCGT CGTGTTCTGC AACGCGGTGG
AAGACAATCC GTTTATGGCG 601 GGTGCGTTCC ACGGCTCGGG CGAAGCGGAT
GCTGTGATTA ATGTCGGCGT 651 ATCCGGTCCA GGCGTGGTCA AAGCCGCGCT
GGAAAATTCG GACGCGGTCA 701 GCCTGACCGA GGTCGCCGAA GTCGTGAAGA
AAACCGCTTT CAAAATCACC 751 CGCGTGGGCG AACTCATCGG TCGCGAAGCC
TCAAAAATGC TGAATATCCC 801 GTTCGGCATT CTCGATTTGT CGCTGGCACC
GACCGCCGTC GTCGGCGACT 851 CGGTGGCGCG CATTCTTGAA GAAATGGGCT
TGAGCGTCTG CGGTACGCAC 901 GGCACAACAG CAGCTTTGGC ATTGCTGAAC
GATGCCGTGA AAAAGGGCGG 951 CATGATGGCT TCCAGCGCGG TCGGCGGTTT
GAGCGGCGCG TTTATCCCCG 1001 TTTCCGAAGA CGAAGGTATG ATTGCCGCCG
CCGAGGCAGG CGTGTTGACG 1051 CTGGACAAAC TCGAAGCCAT GACCGCCGTC
TGCTCCGTTG GTTTGGACAT 1101 GATTGCCGTT CCCGGCGACA CGCCCGCGCA
CACCATTTCC GGCATCATCG 1151 CCGACGAAGC CGCCATCGGC ATGATCAACA
GCAAAACCAC CGCCGTGCGC 1201 ATTATTCCGG TAACGGGCAA AACCGTCGGC
GACAGCGTCG AGTTCGGCGG 1251 TCTGTTGGGC TACGCGCCTG TAATGCCGGC
AAAAGAAGGT TCGTGCGAAG 1301 TGTTCGTCAA CCGGGGCGGC AGGATTCCCG
CACCGGTTCA ATCGATGAAA 1351 AACTGA
This corresponds to the amino acid sequence <SEQ ID 1302; ORF
312.ng>:
TABLE-US-01606 g312.pep 1 MSIQSGEILE TVKMVADRNF DVRTITIGID
LHDCISTDID VLNQNIYNKI 51 TTVGKDLVAT AKHLSAKYGV PIVNQRISVT
PIAQIAAATK ADSYVSVAQT 101 LDKAAKAIGV SFIGGFSALV QKGMSPSDEV
LIRSVPEAMK TTDIVCSSIN 151 IGSTRAGINM DAVKLAGETI KRTAEITPEG
FGCAKIVVFC NAVEDNPFMA 201 GAFHGSGEAD AVINVGVSGP GVVKAALENS
DAVSLTEVAE VVKKTAFKIT 251 RVGELIGREA SKMLNIPFGI LDLSLAPTPA
VGDSVARILE EMGLSVCGTH 301 GTTAALALLN DAVKKGGMMA SSAVGGLSGA
FIPVSEDEGM IAAAEAGVLT 351 LDKLEAMTAV CSVGLDMIAV PGDTPAHTIS
GIIADEAAIG MINSKTTAVR 401 IIPVTGKTVG DSVEFGGLLG YAPVMPAKEG
SCEVFVNRGG RIPAPVQSMK 451 N*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1303>:
TABLE-US-01607 m312.seq 1 ATGAGTATCC AATCCGGCGA AATTTTAGAA
ACCGTCAAAA TGGTTGCCGA 51 CCAGAATTTT GATGTCCGCA CCATTACCAT
CGGCATTGAT TTGCACGACT 101 GCATCAGCAG CGATATCAAT GTGTTGAACC
AAAATATTTA CAATAAAATT 151 ACCACAGTCG GCAAAGACTT GGTCACTACG
GCAAAATATC TGTCTGCCAA 201 ATACGGCGTA CCGATTGTGA ATCAGCGCAT
TTCCGTTACG CCGATTGCCC 251 AAATCGCGGC GGCCACCCAT GCTGATTCTT
ACGTCAGCGT GGCGCAAACT 301 TTGGATAAAG CTGCCAAAGC CATCGGTGTG
TCTTTTATCG GCGGTTTTTC 351 CGCGTTGGTG CAAAAAGGGA TGTCGCcTTC
GGATGAGGTG TTAATCCGCT 401 CCATTCCCGA AGCGATGAAG ACTACCGATA
TTGTGTGCwG CTCCATCAAT 451 ATCGGCAGTA CGCGTGCCGG TATCAATATG
GATGCGGTCA AGCTGGCGGG 501 CGAAACcGTc AAACGCACGG CGGAAATCAC
GCCCGAAGGT TTCGGCTGCG 551 CTAAAATTGT CGTGTTCTGC AACGCGGTGG
AAGACAACCC GTTTwTGGCG 601 GGCGCGTTTC ATGGTTCGGG CGATGCCGTT
ATCAATGTCG GCGTATCCGG 651 CCCAGGTGTC GTAAAAGCCG CGTTGGAAAA
TTCAGATGCA ACGACATTGA 701 CCGAAGTTGC GGAAGTAGTG AAGAAAACTG
CTTTCAAAAT TACCCGCGTG 751 GGCGAACTCA TCGGCCGCGA AGCcTCAAAA
ATGCTGAATA TCCCGTTTGG 801 TATTCTCGAC TTGTCGCCGA CCCCGCCCGT
CGGCGACTCA GTGGCACGCA 851 TTCTTGAAGA AATGGGCTTG AGCGTCTGCG
GTACGCACGG CACAACAGCA 901 GCTTTGGCAT TGCTGAACGA TGCCGTGAAA
AAAGGCGGCA TGATGGCTTC 951 CAGCGCGGTC GGGGGTTTGA GTGGCGCGTT
TATCCCCGTT TCCGAAGACG 1001 AAGGTATGAT yGmCgCcGCC GAAGCAGGCG
TGCTGACGCT GGACAAACTC 1051 GAAGCCATGA CCGCCGTTTG TTCGGTCGGC
TTGGATATGA TTGCCGTTCC 1101 CGGCGACACG CCCGCGCACA CCATTTCCGG
CATCATTGCC GACGAAGCCG 1151 CCATCGGCAt GATCAACAGC AAAACCACTG
CCGTGCGCAT TATTCCGGTA 1201 ACCGGTAAAA CCGTCGGCGA CAcGGTCGAG
TTCGGCGGCT TGTTGGgCTA 1251 CGCGCCTGTG ATGCCGGTCA AAGAAGGTTC
GTGCGAAGTA TTCGTCAACC 1301 GAGGCGGCAG AATTCCGGCT CCGGTTCAAT
CGATGAAAAA CTGA
This corresponds to the amino acid sequence <SEQ ID 1304; ORF
312>:
TABLE-US-01608 m312.pep 1 MSIQSGEILE TVKMVADQNF DVRTITIGID
LHDCISSDIN VLNQNIYNKI 51 TTVGKDLVTT AKYLSAKYGV PIVNQRISVT
PIAQIAAATH ADSYVSVAQT 101 LDKAAKAIGV SFIGGFSALV QKGMSPSDEV
LIRSIPEAMK TTDIVCXSIN 151 IGSTRAGINM DAVKLAGETV KRTAEITPEG
FGCAKIVVFC NAVEDNPFXA 201 GAFHGSGDAV INVGVSGPGV VKAALENSDA
TTLTEVAEVV KKTAFKITRV 251 GELIGREASK MLNIPFGILD LSPTPPVGDS
VARILEEMGL SVCGTHGTTA 301 ALALLNDAVK KGGMMASSAV GGLSGAFIPV
SEDEGMIXAA EAGVLTLDKL 351 EAMTAVCSVG LDMIAVPGDT PAHTISGIIA
DEAAIGMINS KTTAVRIIPV 401 TGKTVGDTVE FGGLLGYAPV MPVKEGSCEV
FVNRGGRIPA PVQSMKN*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 312
shows 95.6% identity over a 451 aa overlap with a predicted ORF
(ORF 312.ng) from N. gonorrhoeae:
TABLE-US-01609 m312/g312 10 20 30 40 50 60 m312.pep
MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQNIYNKITTVGKDLVTT
|||||||||||||||||:||||||||||||||||||:||:||||||||||||||||||:| g312
MSIQSGEILETVKMVADRNFDVRTITIGIDLHDCISTDIDVLNQNIYNKITTVGKDLVAT 10 20
30 40 50 60 70 80 90 100 110 120 m312.pep
AKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLDKAAKAIGVSFIGGFSALV
||:||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g312
AKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLDKAAKAIGVSFIGGFSALV 70 80
90 100 110 120 130 140 150 160 170 180 m312.pep
QKGMSPSDEVLIRSIPEAMKTTDIVCXSINIGSTRAGINMDAVKLAGETVKRTAEITPEG
||||||||||||||:||||||||||| ||||||||||||||||||||||:|||||||||| g312
QKGMSPSDEVLIRSVPEAMKTTDIVCSSINIGSTRAGINMDAVKLAGETIKRTAEITPEG 130
140 150 160 170 180 190 200 210 220 230 m312.pep
FGCAKIVVFCNAVEDNPFXAGAFHGSG--DAVINVGVSGPGVVKAALENSDATTLTEVAE
|||||||||||||||||| |||||||| |||||||||||||||||||||||::|||||| g312
FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDAVSLTEVAE 190
200 210 220 230 240 240 250 260 270 280 290 m312.pep
VVKKTAFKITRVGELIGREASKMLNIPFGILDLS--PTPPVGDSVARILEEMGLSVCGTH
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| g312
VVKKTAFKITRVGELIGREASKMLNIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTH 250
260 270 280 290 300 300 310 320 330 340 350 m312.pep
GTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIXAAEAGVLTLDKLEAMTAV
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| g312
GITAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLILDKLEAMTAV 310
320 330 340 350 360 360 370 380 390 400 410 m312.pep
CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGDTVEFGGLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| g312
CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVIGKTVGDSVEFGGLLG 370
380 390 400 410 420 420 430 440 m312.pep
YAPVMPVKEGSCEVFVNRGGRIPAPVQSMKNX ||||||:|||||||||||||||||||||||||
g312 YAPVMPAKEGSCEVFVNRGGRIPAPVQSMKNX 430 440 450
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1305>:
TABLE-US-01610 a312.seq 1 ATGAGTATCC AATCCGGCGA AATTTTAGAA
ACCGTCAAAA TGGTTGCCGA 51 CCAGAATTTC GATGTCCGCA CCATTACCAT
CGGCATTGAT TTGCACGACT 101 GCATCAGCAC CGACATCGAC GTGTTGAACC
AAAATATTTA CAACAAAATT 151 ACCACGGTCG GCAAAGACTT GGTGGCGACA
GCAAAATATC TGTCTGCCAA 201 ATACGGCGTG CCGATTGTGA ATCAGCGCAT
TTCTGTCACG CCGATTGCCC 251 AAATCGCGGC GGCCACCCAT GCTGATTCTT
ACGTCAGCGT GGCGCAAACT 301 TTGGATAAGG CTGCCAAAGC CATCGGCGTG
TCTTTTATTG GCGGCTTTTC 351 CGCGCTGGTG CAAAAAGGTA TGTCGCCTTC
TGACGAGGTG TTAATCCGTT 401 CCATTCCCGA AGCGATGAAG ACTACTGATA
TCGTGTGCAG CTCCATCAAT 451 ATCGGCAGTA CGCGCGCCGG TATCAATATG
GACGCGGTCA GACTGGCGGG 501 CGAAACCATC AAACGCACGG CTGAAATCAC
ACTAGAAGGT TTCGGCTGCG 551 CCAAAATCGT CGTGTTCTGC AACGCGGTGG
AAGACAACCC GTTTATGGCG 601 GGCGCGTTTC ACGGCTCAGG CGAAGCGGAT
GCTGTGATTA ATGTCGGCGT 651 ATCCGGCCCG GGTGTCGTAA AAGCCGCGTT
GGAAAATTCG GATGCAACGA 701 CATTGACCGA AGTTGCCGAA GTTGTGAAGA
AAACCGCCTT CAAAATTACC 751 CGCGTGGGCG AACTCATCGG CCGCGAAGCC
TCAAAAATGC TGAATATCCC 801 GTTTGGTATT CTCGACTTGT CGCTGGCACC
GACCCCTGCC GTCGGCGACT 851 CGGTGGCGCG CATTCTTGAA GAAATGGGTT
TGAGCGTCTG CGGTACGCAC 901 GGCACAACAG CAGCTTTGGC ATTGCTGAAC
GATGCCGTGA AAAAGGGCGG 951 CATGATGGCT TCGAGCGCGG TTGGCGGTTT
GAGTGGCGCG TTTATCCCCG 1001 TTTCCGAAGA CGAAGGTATG ATTGCCGCCG
CCGAAGCAGG CGTGCTGACG 1051 TTGGATAAAC TCGAAGCGAT GACCGCCGTT
TGTTCGGTCG GCTTGGATAT 1101 GATTGCCGTT CCCGGCGACA CACCCGCGCA
CACCATTTCC GGCATCATTG 1151 CCGACGAAGC CGCCATCGGC ATGATCAACA
GCAAAACCAC TGCCGTGCGC 1201 ATTATTCCGG TAACCGGTAA AACCGTCGGC
GACAGCGTCG AGTTCGGCGG 1251 CCTGTTGGGC TACGCGCCTG TAATGCCGGT
AAAAGAAGGC TCATGCGAAG 1301 TGTTCGTCAA CCGGGGCGGC AGGATTCCCG
CACCGGTTCA ATCGATGAAA 1351 AACTGA
This corresponds to the amino acid sequence <SEQ ID 1306; ORF
312.a>:
TABLE-US-01611 a312.pep 1 MSIQSGEILE TVKMVADQNF DVRTITIGID
LHDCISTDID VLNQNIYNKI 51 TTVGKDLVAT AKYLSAKYGV PIVNQRISVT
PIAQIAAATH ADSYVSVAQT 101 LDKAAKAIGV SFIGGFSALV QKGMSPSDEV
LIRSIPEAMK TTDIVCSSIN 151 IGSTRAGINM DAVRLAGETI KRTAEITLEG
FGCAKIVVFC NAVEDNPFMA 201 GAFHGSGEAD AVINVGVSGP GVVKAALENS
DATTLTEVAE VVKKTAFKIT 251 RVGELIGREA SKMLNIPFGI LDLSLAPTPA
VGDSVARILE EMGLSVCGTH 301 GTTAALALLN DAVKKGGMMA SSAVGGLSGA
FIPVSEDEGM IAAAEAGVLT 351 LDKLEAMTAV CSVGLDMIAV PGDTPAHTIS
GIIADEAAIG MINSKTTAVR 401 IIPVTGKTVG DSVEFGGLLG YAPVMPVKEG
SCEVFVNRGG RIPAPVQSMK 451 N* m312/a312 96.7% identity in 451 aa
overlap 10 20 30 40 50 60 m312.pep
MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQNIYNKITTVGKDLVTT
||||||||||||||||||||||||||||||||||||:||:||||||||||||||||||:| a312
MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQNIYNKITTVGKDLVAT 10 20
30 40 50 60 70 80 90 100 110 120 m312.pep
AKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLDKAAKAIGVSFIGGFSALV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a312
AKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLDKAAKAIGVSFIGGFSALV 70 80
90 100 110 120 130 140 150 160 170 180 m312.pep
QKGMSPSDEVLIRSIPEAMKTTDIVCXSINIGSTRAGINMDAVKLAGETVKRTAEITPEG
|||||||||||||||||||||||||| ||||||||||||||||:|||||:||||||| || a312
QKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINMDAVRLAGETIKRTAEITLEG 130
140 150 160 170 180 190 200 210 220 230 m312.pep
FGCAKIVVFCNAVEDNPFXAGAFHGSG--DAVINVGVSGPGVVKAALENSDATTLTEVAE
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| a312
FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDATTLTEVAE 190
200 210 220 230 240 240 250 260 270 280 290 m312.pep
VVKKTAFKITRVGELIGREASKMLNIPFGILDLS--PTPPVGDSVARILEEMGLSVCGTH
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| a312
VVKKTAFKITRVGELIGREASKMLNIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTH 250
260 270 280 290 300 300 310 320 330 340 350 m312.pep
GTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIXAAEAGVLTLDKLEAMTAV
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| a312
GITAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLILDKLEAMTAV 310
320 330 340 350 360 360 370 380 390 400 410 m312.pep
CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGDTVEFGGLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| a312
CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVIGKTVGDSVEFGGLLG 370
380 390 400 410 420 420 430 440 m312.pep
YAPVMPVKEGSCEVFVNRGGRIPAPVQSMKNX ||||||||||||||||||||||||||||||||
a312 YAPVMPVKEGSCEVFVNRGGRIPAPVQSMKNX 430 440 450
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1307>:
TABLE-US-01612 g313.seq 1 atggacgacc cgcgcaccta cggatcgggc
aatcccggcg cgaccaatgt 51 tttacgcagc ggcaaaaaaa aggcggccgc
gctgacgctc ttgggcgatg 101 ccgccaaagg tttggttgcc gttttgcttg
cacgcgtgct tcaagaaccg 151 ctcggtttat ccgacagcgc aatcgccgcc
gtcgcactcg ccgcgctggt 201 cgggcatatg tggccggtgt ttttcggatt
taagggcggc aaaggcgtgg 251 caacggcatt gggcgtgctt ctggcactct
ctcctgcaac tgccttggtc 301 tgcgcgttga tttggcttgt gatggcattc
ggcttcaaag tatcctccct 351 tgccgcgctg gtcgccacaa ccgccgcccc
ccttgccgca ctgtttttta 401 tgccgcatac ttcttggatt ttcgcaaccc
tcgcaatcgc catattggtg 451 ttgctccgcc ataagagcaa catcctcaac
ctgattaaag gcaaagaaag 501 caaaatcggc gaaaaacgct ga
This corresponds to the amino acid sequence <SEQ ID 1308; ORF
313.ng>:
TABLE-US-01613 g313.pep 1 MDDPRTYGSG NPGATNVLRS GKKKAAALTL
LGDAAKGLVA VLLARVLQEP 51 LGLSDSAIAA VALAALVGHM WPVFFGFKGG
KGVATALGVL LALSPATALV 101 CALIWLVMAF GFKVSSLAAL VATTAAPLAA
LFFMPHTSWI FATLAIAILV 151 LLRHKSNILN LIKGKESKIG EKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1309>:
TABLE-US-01614 m313.seq 1 ATGGACGACC CGCGCACCTA CGGATCGGGC
AATCCGGGGG CAACCAATGT 51 TTTACGCAGC GGCAAAAAAA AGGCGGCCGC
GCTGACGCTC TTGGGCGATG 101 CCGCCAAAGG TTTAGTTGCC GTTTTGCTTG
CACGCGTGCT TCAAGAACCG 151 CTCGGTTTAT CCGACAGCGC AATCGCGGCC
GTCGCACTCG CCGCGCTGGT 201 CGGGCATATG TGGCCGGTGT TTTTCGGATT
TAAAGGCGGC AAAGGCGTGG 251 CAACGGCATT GGGCGTGCTT CTGGCACTCT
CTCCCGCAAC TGCCTTGGTC 301 TGCGCGTTGA TTTGGCTTGT TATGGCATTC
GGCTTCAAGG TGTCCTCCCT 351 TGCCGCATTA ACCGCCACAA TCGCCGCACC
GGTCGCCGCA TCCTTCTTTA 401 TGCCGCACGT CTCGTGGGTT TGGGCGACCG
TCGCCATTGC TTTGCTGGTG 451 TTGTTCCGCC ACAAAAGTAA TATCGTCAAG
CTGCTCGAAG GCAGAGAAAG 501 CAAAATCGGC GGCAGCCGCT GA
This corresponds to the amino acid sequence <SEQ ID 1310; ORF
313>:
TABLE-US-01615 m313.pep 1 MDDPRTYGSG NPGATNVLRS GKKKAAALTL
LGDAAKGLVA VLLARVLQEP 51 LGLSDSAIAA VALAALVGHM WPVFFGFKGG
KGVATALGVL LALSPATALV 101 CALIWLVMAF GFKVSSLAAL TATIAAPVAA
SFFMPHVSWV WATVAIALLV 151 LFRHKSNIVK LLEGRESKIG GSR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 313
shows 90.2% identity over a 173 aa overlap with a predicted ORF
(ORF 313.ng) from N. gonorrhoeae:
TABLE-US-01616 m313/g313 10 20 30 40 50 60 m313.pep
MDDPRTYGSGNPGATNVLRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g313
MDDPRTYGSGNPGATNVLRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAA 10 20
30 40 50 60 70 80 90 100 110 120 m313.pep
VALAALVGHMWPVFFGFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g313
VALAALVGHMWPVFFGFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAAL 70 80
90 100 110 120 130 140 150 160 170 m313.pep
TATIAAPVAASFFMPHVSWVWATVAIALLVLFRHKSNIVKLLEGRESKIGGSRX :|| |||:||
|||||:||::||:|||:|||:||||||::|::|:||||| :|| g313
VATTAAPLAALFFMPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGEKRX 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1311>:
TABLE-US-01617 a313.seq 1 ATGGACGACC CGCGCACCTA CGGATCGGGC
AATCCGGGGG CAACCAATGT 51 TTTACGCAGC GGCAAAAAAA AGGCGGCCGC
GCTGACGCTC TTGGGCGATG 101 CCGCCAAAGG TTTGGTTGCC GTTTTGCTTG
CACGCGTGCT TCAAGAACCG 151 CTCGGTTTAT CCGACAGCGC AATCGCGGCC
GTCGCACTCG CCGCGCTGGT 201 CGGGCATATG TGGCCGGTGT TTTTCGGATT
TAAAGGCGGC AAAGGCGTGG 251 CAACGGCATT GGGCGTGCTT CTGGCACTCT
CTCCCACAAC TGCCTTGGTC 301 TGCGCGTTGA TTTGGCTTGT GATGGCATTC
GGCTTCAAGG TGTCCTCCCT 351 TGCCGCATTA ACCGCCACAA TCGCCGCCCC
CCTTGCCGCA CTGTTTTTTA 401 TGCCGCATAC TTCTTGGATT TTCGCAACCC
TCGCAATCGC CATATTGGTG 451 TTGCTCCGCC ATAAGAGCAA CATCCTCAAC
CTGATTAAAG GCAAAGAAAG 501 CAAAATCGGC GAAAAACGCT GA
This corresponds to the amino acid sequence <SEQ ID 1312; ORF
313.a>:
TABLE-US-01618 a313.pep 1 MDDPRTYGSG NPGATNVLRS GKKKAAALTL
LGDAAKGLVA VLLARVLQEP 51 LGLSDSAIAA VALAALVGHM WPVFFGFKGG
KGVATALGVL LALSPTTALV 101 CALIWLVMAF GFKVSSLAAL TATIAAPLAA
LFFMPHTSWI FATLAIAILV 151 LLRHKSNILN LIKGKESKIG EKR* m313/a313
90.8% identity in 173 aa overlap 10 20 30 40 50 60 m313.pep
MDDPRTYGSGNPGATNVLRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a313
MDDPRTYGSGNPGATNVLRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAA 10 20
30 40 50 60 70 80 90 100 110 120 m313.pep
VALAALVGHMWPVFFGFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAAL
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a313
VALAALVGHMWPVFFGFKGGKGVATALGVLLALSPTTALVCALIWLVMAFGFKVSSLAAL 70 80
90 100 110 120 130 140 150 160 170 m313.pep
TATIAAPVAASFFMPHVSWVWATVAIALLVLFRHKSNIVKLLEGRESKIGGSRX |||||||:||
|||||:||::||:|||:|||:||||||::|::|:||||| :|| a313
TATIAAPLAALFFMPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGEKRX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1313>:
TABLE-US-01619 g401.seq 1 atgaaattac aacaattggc tgaagaaaaa
atcggcgttc tgattgtgtt 51 cacgctgctt gtagtcagtg tcggtctgtt
gattgaagtt gtgcccttgg 101 cctttaccaa ggcggcaaca cagccggcgc
cgggcgtgaa gccttacaat 151 gccctgcagg ttgccggacg cgatatttac
atccgtgagg gctgttacaa 201 ctgccactct caaatgattc gtccgttccg
tgcggaaacc gagcgttacg 251 gtcattactc tgttgccgga gagtcggttt
acgaccatcc gttccaatgg 301 ggttccaaac gtaccggtcc tgatttggca
cgtgtgggcg gccgctattc 351 cgacgaatgg caccgcatcc acctgctgaa
tccccgtgat gtcgtgcctg 401 agtccaatat gccggcattc ccgtggcttg
cacgcaataa agtcgatgtc 451 gatgcaaccg ttgccaacat gaaggctttg
cgtaaagtag gtactcctta 501 cagtgatgag gaaattgcga aagcgcctga
ggctttggca aacaaatccg 551 agctggatgc tgtagtcgcc tatctgcaag
gattgggtct ggctttgaaa 601 aacgtaaggt aa
This corresponds to the amino acid sequence <SEQ ID 1314; ORF
401.ng>:
TABLE-US-01620 g401.pep 1 MKLQQLAEEK IGVLIVFTLL VVSVGLLIEV
VPLAFTKAAT QPAPGVKPYN 51 ALQVAGRDIY IREGCYNCHS QMIRPFRAET
ERYGHYSVAG ESVYDHPFQW 101 GSKRTGPDLA RVGGRYSDEW HRIHLLNPRD
VVPESNMPAF PWLARNKVDV 151 DATVANMKAL RKVGTPYSDE EIAKAPEALA
NKSELDAVVA YLQGLGLALK 201 NVR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1315>:
TABLE-US-01621 m401.seq 1 ATGAAATTAC AaCAATTGGC TGAAGAAAAA
ATCGGCGTTC TGATTGTGTT 51 CACGCTGCTT GTAGTCAGTG TCGGTCTGTT
GATTGAAGTT GTGCCCTTGG 101 CCTTTACCAA GGCGGCAACA CAGCCGGCGC
CGGGCGTGAA GCCTTACAAT 151 GCCCTGCAGG TTGCCGGACG CGATATTTAC
ATCCGTGAGG GCTGTTACAA 201 CTGCCACTCG CAAATGATTC GTCCGTTCCG
TGCGGAAACC GAGCGTTACG 251 GTCATTACTC TGTTGCCGGA GAGTCGGTTT
ACGACCATCC GTTCCAATGG 301 GGTTCCAAAC GTACCGGTCC TGATTTGGCA
CGTGTGGGCG GTCGCTATTC 351 CGACGAATGG CACCGTATCC ACCTGCTGAA
TCCCCGTGAT GTCGTGCCTG 401 AGTCCAATAT GCCGGCATTC CCGTGGCTTG
CACGCAATAA AGTCGATGTC 451 GATGCAACCG TTGCCAACAT GAAGGCTTTG
CGTAAAGTAG GTACTCCTTA 501 CAGTGATGAG GAAATTGCGA AAGCACCTGA
GGCTTTGGCA AACAAATCCG 551 AGCTGGATGC TGTAGTCGCC TATCTGCAAG
GATTGGGTCT GGCTTTGAAA 601 AACGTAAGGT AA
This corresponds to the amino acid sequence <SEQ ID 1316; ORF
401>:
TABLE-US-01622 m401.pep 1 MKLQQLAEEK IGVLIVFTLL VVSVGLLIEV
VPLAFTKAAT QPAPGVKPYN 51 ALQVAGRDIY IREGCYNCHS QMIRPFRAET
ERYGHYSVAG ESVYDHPFQW 101 GSKRTGPDLA RVGGRYSDEW HRIHLLNPRD
VVPESNMPAF PWLARNKVDV 151 DATVANMKAL RKVGTPYSDE EIAKAPEALA
NKSELDAVVA YLQGLGLALK 201 NVR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 401
shows 100.0% identity over a 203 aa overlap with a predicted ORF
(ORF 401.ng) from N. gonorrhoeae:
TABLE-US-01623 m401/g401 10 20 30 40 50 60 m401.pep
MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAPGVKPYNALQVAGRDIY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g401
MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAPGVKPYNALQVAGRDIY 10 20
30 40 50 60 70 80 90 100 110 120 m401.pep
IREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g401
IREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW 70 80
90 100 110 120 130 140 150 160 170 180 m401.pep
HRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKALRKVGTPYSDEEIAKAPEALA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g401
HRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKALRKVGTPYSDEEIAKAPEALA 130
140 150 160 170 180 190 200 m401.pep NKSELDAVVAYLQGLGLALKNVRX
|||||||||||||||||||||||| g401 NKSELDAVVAYLQGLGLALKNVRX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1317>:
TABLE-US-01624 a401.seq 1 ATGAAATTAC AACAATTGGC TGAAGAAAAA
ATCGGCGTTC TGATTGTGTT 51 CACGCTGCTT GTAGTCAGTG TCGGTCTGTT
GATTGAAGTT GTGCCCTTGG 101 CCTTTACCAA GGCGGCAACA CAGCCGGCGT
CGGGCGTGAA GCCTTACAAT 151 GCCCTGCAGG TTGCCGGACG CGATATTTAC
ATCCGTGAGG GCTGTTACAA 201 CTGCCACTCG CAAATGATTC GTCCGTTCCG
TGCGGAAACC GAGCGTTACG 251 GTCATTACTC TGTTGCCGGA GAGTCGGTTT
ACGACCATCC GTTCCAATGG 301 GGTTCCAAAC GTACCGGTCC TGATTTGGCA
CGTGTGGGCG GTCGCTATTC 351 CGACGAATGG CACCGTATCC ACCTGCTGAA
TCCCCGTGAT GTCGTGCCTG 401 AGTCCAATAT GCCGGCATTC CCGTGGCTTG
CACGCAATAA AGTCGATGTC 451 GATGCAACCG TTGCCAACAT GAAGGCTTTG
CGTAAAGTAG GTACTCCTTA 501 CAGTGATGAG GAAATTGCGA AAGCGCCTGA
GGCTTTGGCA AACAAATCCG 551 AGCTGGATGC TGTAGTCGCC TATCTGCAAG
GATTGGGTCT GGCTTTGAAA 601 AACGTAAGGT AA
This corresponds to the amino acid sequence <SEQ ID 1318; ORF
401.a>:
TABLE-US-01625 a401.pep 1 MKLQQLAEEK IGVLIVFTLL VVSVGLLIEV
VPLAFTKAAT QPASGVKPYN 51 ALQVAGRDIY IREGCYNCHS QMIRPFRAET
ERYGHYSVAG ESVYDHPFQW 101 GSKRTGPDLA RVGGRYSDEW HRIHLLNPRD
VVPESNMPAF PWLARNKVDV 151 DATVANMKAL RKVGTPYSDE EIAKAPEALA
NKSELDAVVA YLQGLGLALK 201 NVR* m401/a401 99.5% identity in 203 aa
overlap 10 20 30 40 50 60 m401.pep
MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAPGVKPYNALQVAGRDIY
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| a401
MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPASGVKPYNALQVAGRDIY 10 20
30 40 50 60 70 80 90 100 110 120 m401.pep
IREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a401
IREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW 70 80
90 100 110 120 130 140 150 160 170 180 m401.pep
HRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKALRKVGTPYSDEEIAKAPEALA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a401
HRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKALRKVGTPYSDEEIAKAPEALA 130
140 150 160 170 180 190 200 m401.pep NKSELDAVVAYLQGLGLALKNVRX
|||||||||||||||||||||||| a401 NKSELDAVVAYLQGLGLALKNVRX 190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1319>:
TABLE-US-01626 g402.seq 1 ATGGATATGG TGAACACTAA Accgaatact
agtgtgatta atatgctttc 51 tttccttacc ggatTATTGA GCTTGGGTat
agaagtCtTg tGGGTAAGGA 101 TGttttcgTT CGCagcAcag tccgtgcctc
aggCATTTTC atttattctt 151 gcctGttttc tgACCGgtat cgccgtcggc
gCgTATTTTG GCAAACGGAT 201 TTGCCGCAGC CGCTTTGTTG ATATTCCctT
TATCGGGCAG TgcttcttgT 251 GGGCGGGTAT TgccgaTttt ttgatTTTGG
GTGCTGCGTG GTTGTTGACG 301 GGTTTTTccg gtttcGTCCA CCACGCCGGT
AtttTCATTA CCCTgtctgc 351 CGtcGTCAGG GGGTTGATTT TCCCACTTGT
ACACCATgtg GGTACGGATG 401 GCAACAAATC CGGACGACAG GTTTCCAATG
TTTATTTCGC CAACGTTGCC 451 GGCAGTGCAT TGGGTCCGGT CCTTATCGGC
TTTGTGATAC TTGATttgtt 501 gTCCACCCAA CAGATTtacc tgctcatCTG
TTTGATTTCT GCTGCtgtcc 551 cTTTGTTTTg tacaCTGtTC CAAAAAAGTC
TCCGACTGAA TGCAGTGTCG 601 GTAGCAGTTT CCCTAATGTT CGGCATCCTC
ATGTTCCTAC TGCCGGATTC 651 TGTCTTTCAA AATATTGCTG GCCGTCCGGA
TAGGTTGATT GAAAACAAAC 701 ACGGCATTGT TGCGGTTTAC CATAGAGATG
GTGATAAGGT TGTTTATGGG 751 GCGAATGTAT ACGACGGCGC ATACAATACC
GATATATTCA ATAGTGTCAA 801 CGGCATCGAA CGTGCCTATC TGCTACCCTC
CCTGAAGTCC GGCATACGCC 851 GCATTTTCGT CGTTGGATTG AGTACAGGTT
CGTGGGCGCG CGTCTTGTCT 901 GCCATTCCGG AAATGCAGTC GATGATCGTT
GCGGAAATCA ATCCGGCATA 951 CCGTAGCCTT ATCGCGGAcg agccgcAAAT
CGCACCGCTT TTGCAGGACA 1001 AACGTGTTGA AATTGTATTG GATGACGGTA
GGAAATGGCT GCGTCGCCAT 1051 CCTGATGAAA AATTCGACCT GATTTTGATG
AATTCGACTT GGTACTGGCG 1101 TGCCTATTCC ACTAACCTGT TGAGTGCGGA
ATTTTTAAAA CAGGTGCAAA 1151 GCCACCTTAC CCCGGATGGT ATTGTAATGT
TTAATACCAC GCACAGCCCG 1201 CATgctTTTG CTACCGCCGT ACACAGTATT
CCCTATGCAT ACCGCTACGG 1251 GCATATGGTA GTCGGCTCGG CAACCCCGGT
AGTTTTCcct AATAAAGAAC 1301 TGCTCaagca aCGCCTTTcc cgGTTGATTT
GGCCGGAAAG CGGCAGgcac 1351 gtATTTGACA GCAGCACCGT GGATGCTGCA
GCACAAAAGG TTGtctctCG 1401 TATGCTGATT CGGATGACGG AAcctTCGGC
TGGGGCGGAA GTCATTACTG 1451 ACGATAATAT GATTGTAGAA TACAAATACG
GCAGAGGGAT TTAA
This corresponds to the amino acid sequence <SEQ ID 1320; ORF
402.ng>:
TABLE-US-01627 g402.pep 1 MDMVNTKPNT SVINMLSFLT GLLSLGIEVL
WVRMFSFAAQ SVPQAFSFIL 51 ACFLTGIAVG AYFGKRICRS RFVDIPFIGQ
CFLWAGIADF LILGAAWLLT 101 GFSGFVHHAG IFITLSAVVR GLIFPLVHHV
GTDGNKSGRQ VSNVYFANVA 151 GSALGPVLIG FVILDLLSTQ QIYLLICLIS
AAVPLFCTLF QKSLRLNAVS 201 VAVSLMFGIL MFLLPDSVFQ NIAGRPDRLI
ENKHGIVAVY HRDGDKVVYG 251 ANVYDGAYNT DIFNSVNGIE RAYLLPSLKS
GIRRIFVVGL STGSWARVLS 301 AIPEMQSMIV AEINPAYRSL IADEPQIAPL
LQDKRVEIVL DDGRKWLRRH 351 PDEKFDLILM NSTWYWRAYS TNLLSAEFLK
QVQSHLTPDG IVMFNTTHSP 401 HAFATAVHSI PYAYRYGHMV VGSATPVVFP
NKELLKQRLS RLIWPESGRH 451 VFDSSTVDAA AQKVVSRMLI RMTEPSAGAE
VITDDNMIVE YKYGRGI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1321>:
TABLE-US-01628 m402.seq 1 ATGGATATAG TGAACACTAA ACCGAATACT
AGTTTGATTT ATATGCnTTC 51 TTTCCTTAGC GGCTTATTGA GCTTGGGTAT
AGAAGTCTTG TGGGTGAGGA 101 TGTTTTCGTT CGCAGCACAG TCCGTGCCTC
AGGCATTTTC ATTTACCCTT 151 GCCTGTTTTC TGACCGGTAT CGCCGTCGGC
GCGTATTTTG GCAAACGGAT 201 TTGCCGCAGC CGCTTTGTTG ATATTCCCTT
TATCGGGCAG TGCTTCTTGT 251 GGGCGGGTAT TGCCGACTTT TTGATTTTGG
GTGCTGCGTG GTTGTTGACG 301 GGTTTTTCCG GCTTCGTCCA CCACGCCGGT
ATCTTCATTA CCCTGTCTGC 351 CGTCGTCAsA sGGTTGATTT TCCCGCTCGT
ACACCATGTG GGTACGGATG 401 GCAACAAATC CGGACGACAG GTTTCCAATG
TTTATTTCGC CAmCGTTGCC 451 GGCAGTGCAT TGGGTCCGGT CCTTATCGGC
TTTGTGATAC TTGATTTCTT 501 GTCCACCCAA CAGATTTACC TGCTCATCTG
TwTGATTTCT GCTGCTGTCC 551 CTTTGTTTTG TACACTGTTC CAAAAAAGTC
TCCGACTGAA TGCAGTGTCG 601 GTAGCAGTTT CCCTAATGTT CGGCATCCTC
ATGTTCyTAC TGCCGGATTC 651 TGTCTTTCAA AATATTGCTG ACCGTCCGGA
TAgGCTGATT GAAAACAAAC 701 ACGGCATTGT TGCGGTTTAC CATAGAGATG
GTGATAAGGT TGTTTATGGG 751 GCGAATGTAT ACGACGGCGC ATACAATACC
GATGTATTCA ATAGTGTCAA 801 CGGCATCGAA CGTGCCTATC TGCTACCCTC
CCTGAAGTCT GGCATACGCC 851 GCATTTTCGT CGTTGGACTG AGTACAGGTT
CGTGGGCGCG CGTCTTGTCT 901 GCCATTCCGG AAATGCAGTC GATGATCGTT
GCGGAAATCA ATCCGGCATA 951 CCGTAGCCTT ATCGCGGACG AGCCGCAAAT
CGCCCCGCTT TTGCAGGACA 1001 AACGTGTTGA AATTGTATTG GATGACGGTA
GGAAATGGCT GCGTCGCCAT 1051 CCTGATGAAA AATTCGACCT GATTTTGATG
AATACGACTT GGTACTGGCG 1101 TGCCTATTCC ACCAACCTGT TGAGTGCGGA
ATTTTTAAAA CAGGTGCAAA 1151 GCCACCTTAC CCCGGATGGT ATTGTAATGT
TTAATACCAC GCACAGCCCG 1201 CATGCTTTTG CTACCGCCGT ACACAGTATT
CCCTATGCAT ACCGCTATGG 1251 GCATATGGTA GTCGGCTCGG CAACCCCGGT
AGTTTTCCCT AATAAAGAAC 1301 TGCTCAAGCA ACGTCTCTCC CGGTTGATTT
GGCCGGAAAG CGGCAGGCAC 1351 GTATTTGACA GCAGCACCGT GGATGCTGCA
GCACAAAAGG TTGTCTCTCG 1401 TATGCTGATT CAGATGACGG aAcCTTCGGC
TGGGGCGGAA GTTATTACCG 1451 ACGATAATAT GATTGTAGAA TACAAATACG
GCAGAGGGAT TTAA
This corresponds to the amino acid sequence <SEQ ID 1322; ORF
402>:
TABLE-US-01629 m402.pep 1 MDIVNTKPNT SLIYMXSFLS GLLSLGIEVL
WVRMFSFAAQ SVPQAFSFTL 51 ACFLTGIAVG AYFGKRICRS RFVDIPFIGQ
CFLWAGIADF LILGAAWLLT 101 GFSGFVHHAG IFITLSAVVX XLIFPLVHHV
GTDGNKSGRQ VSNVYFAXVA 151 GSALGPVLIG FVILDFLSTQ QIYLLICXIS
AAVPLFCTLF QKSLRLNAVS 201 VAVSLMFGIL MFLLPDSVFQ NIADRPDRLI
ENKHGIVAVY HRDGDKVVYG 251 ANVYDGAYNT DVFNSVNGIE RAYLLPSLKS
GIRRIFVVGL STGSWARVLS 301 AIPEMQSMIV AEINPAYRSL IADEPQIAPL
LQDKRVEIVL DDGRKWLRRH 351 PDEKFDLILM NTTWYWRAYS TNLLSAEFLK
QVQSHLTPDG IVMFNTTHSP 401 HAFATAVHSI PYAYRYGHMV VGSATPVVFP
NKELLKQRLS RLIWPESGRH 451 VFDSSTVDAA AQKVVSRMLI QMTEPSAGAE
VITDDNMIVE YKYGRGI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 402
shows 97.0% identity over a 497 aa overlap with a predicted ORF
(ORF 402.ng) from N. gonorrhoeae:
TABLE-US-01630 m402/g402 10 20 30 40 50 60 m402.pep
MDIVNTKPNTSLIYMXSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLIGIAVG
||:||||||||:| | |||:|||||||||||||||||||||||||||| ||||||||||| g402
MDMVNTKPNTSVINMLSFLTGLLSLGIEVLWVRMFSFAAQSVPQAFSFILACFLTGIAVG 10 20
30 40 50 60 70 80 90 100 110 120 m402.pep
AYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLSAVVX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g402
AYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLSAVVR 70 80
90 100 110 120 130 140 150 160 170 180 m402.pep
XLIFPLVHHVGTDGNKSGRQVSNVYFAXVAGSALGPVLIGFVILDFLSTQQIYLLICXIS
|||||||||||||||||||||||||| |||||||||||||||||:||||||||||| || g402
GLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDLLSTQQIYLLICLIS 130
140 150 160 170 180 190 200 210 220 230 240 m402.pep
AAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIENKHGIVAVY
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| g402
AAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIAGRPDRLIENKHGIVAVY 190
200 210 220 230 240 250 260 270 280 290 300 m402.pep
HRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGLSTGSWARVLS
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g402
HRDGDKVVYGANVYDGAYNTDIFNSVNGIERAYLLPSLKSGIRRIFVVGLSTGSWARVLS 250
260 270 280 290 300 310 320 330 340 350 360 m402.pep
AIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLRRHPDEKFDLILM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g402
AIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLRRHPDEKFDLILM 310
320 330 340 350 360 370 380 390 400 410 420 m402.pep
NTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATAVHSIPYAYRYGHMV
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g402
NSTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATAVHSIPYAYRYGHMV 370
380 390 400 410 420 430 440 450 460 470 480 m402.pep
VGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKVVSRMLIQMTEPSAGAE
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g402
VGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKVVSRMLIRMTEPSAGAE 430
440 450 460 470 480 490 m402.pep VITDDNMIVEYKYGRGIX
||||||||||||||||| g402 VITDDNMIVEYKYGRGI 490
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1323>:
TABLE-US-01631 a402.seq 1 ATGGATATAG TGAACACTAA ACCGAATACT
AGTTTGATTT ATATGCTTTC 51 TTTCCTTAGC GGCTTATTGA GCTTGGGTAT
AGAAGTCTTG TGGGTAAGGA 101 TGTTTTCGTT CGCAGCACAG TCCGTGCCTC
AGGCATTTTC ATTTACTCTT 151 GCCTGTTTTC TGACCGGTAT CGCCGTCGGC
GCGTATTTTG GCAAACGGAT 201 TTGCCGCAGC CGCTTTGTTG ATATTCCCTT
TATCGGGCAG TGCTTCTTGT 251 GGGCGGGTAT TGCCGACTTT TTGATTTTGG
GTGCTGCGTG GTTGTTGACG 301 GGTTTTTCCG GCTTCGTCCA CCACGCCGGT
ATCTTCATTA CCCTGTCTGC 351 CGTCGTCAGA GGGTTGATTT TCCCGCTCGT
ACACCATGTG GGTACGGATG 401 GCAACAAATC CGGACGACAG GTTTCCAATG
TTTATTTCGC CAACGTTGCC 451 GGCAGTGCAT TGGGTCCGGT CCTTATCGGC
TTTGTGATAC TTGATTTCTT 501 GTCCACCCAA CAGATTTACC TGCTCATCTG
TTTGATTTCT GCTGCTGTCC 551 CTTTGTTTTG TACACTGTTC CAAAAAAGTC
TCCGACTGAA TGCAGTGTCG 601 GTAGCAGTTT CCCTAATGTT CGGCATCCTC
ATGTTCCTAC TGCCGGATTC 651 TGTCTTTCAA AATATTGCTG ACCGTCCGGA
TAGGCTGATT GAAAACAAAC 701 ACGGCATTGT TGCGGTTTAC CATAGAGATG
GTGATAAGGT TGTTTATGGG 751 GCGAATGTAT ACGACGGCGC ATACAATACC
GATGTATTCA ATAGTGTCAA 801 CGGCATCGAA CGTGCCTATC TGCTACCCTC
CCTGAAGTCT GGCATACGCC 851 GCATTTTCGT CGTTGGATTG AGTACAGGTT
CGTGGGCGCG CGTCTTGTCT 901 GCCATTCCGG AAATGCAGTC GATGATCGTT
GCGGAAATCA ATCCGGCATA 951 CCGTAGCCTT ATCGCGGACG AGCCGCAAAT
CGCCCCGCTT TTGCAGGACA 1001 AACGTGTTGA AATTGTATTG GATGACGGTA
GGAAATGGCT GCGTCGCCAT 1051 CCTGATGAAA AATTCGACCT GATTTTGATG
AATACGACTT GGTACTGGCG 1101 TGCCTATTCC ACCAACCTGT TGAGTGCGGA
ATTTTTAAAA CAGGTGCAAA 1151 GCCACCTTAC CCCGGATGGT ATTGTAATGT
TTAATACCAC GCACAGCCCG 1201 CATGCTTTTG CTACCGCCGT ACACAGTATT
CCCTATGCAT ACCGCTATGG 1251 GCATATGGTA GTCGGCTCGG CAACCCCGGT
AGTTTTCCCT AATAAAGAAC 1301 TGCTCAAGCA ACGTCTCTCC CGGTTGATTT
GGCCGGAAAG CGGCAGGCAC 1351 GTATTTGACA GCAGCACCGT GGATGCTGCA
GCACAAAAGG TTGTCTCTCG 1401 TATGCTGATT CAGATGACGG AACCTTCGGC
TGGTGCGGAA GTCATTACCG 1451 ACGATAATAT GATTGTAGAA TACAAATACG
GCAGAGGGAT TTAA
This corresponds to the amino acid sequence <SEQ ID 1324; ORF
402.a>:
TABLE-US-01632 a402.pep 1 MDIVNTKPNT SLIYMLSFLS GLLSLGIEVL
WVRMFSFAAQ SVPQAFSFTL 51 ACFLTGIAVG AYFGKRICRS RFVDIPFIGQ
CFLWAGIADF LILGAAWLLT 101 GFSGFVHHAG IFITLSAVVR GLIFPLVHHV
GTDGNKSGRQ VSNVYFANVA 151 GSALGPVLIG FVILDFLSTQ QIYLLICLIS
AAVPLFCTLF QKSLRLNAVS 201 VAVSLMFGIL MFLLPDSVFQ NIADRPDRLI
ENKHGIVAVY HRDGDKVVYG 251 ANVYDGAYNT DVFNSVNGIE RAYLLPSLKS
GIRRIFVVGL STGSWARVLS 301 AIPEMQSMIV AEINPAYRSL IADEPQIAPL
LQDKRVEIVL DDGRKWLRRH 351 PDEKFDLILM NTTWYWRAYS TNLLSAEFLK
QVQSHLTPDG IVMFNTTHSP 401 HAFATAVHSI PYAYRYGHMV VGSATPVVFP
NKELLKQRLS RLIWPESGRH 451 VFDSSTVDAA AQKVVSRMLI QMTEPSAGAE
VITDDNMIVE YKYGRGI* m402/a402 99.0% identity in 497 aa overlap 10
20 30 40 50 60 m402.pep
MDIVNTKPNTSLIYMXSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIAVG
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a402
MDIVNTKPNTSLIYMLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIAVG 10 20
30 40 50 60 70 80 90 100 110 120 m402.pep
AYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLSAVVX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
AYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLSAVVR 70 80
90 100 110 120 130 140 150 160 170 180 m402.pep
XLIFPLVHHVGTDGNKSGRQVSNVYFAXVAGSALGPVLIGFVILDFLSTQQIYLLICXIS
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || a402
GLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYLLICLIS 130
140 150 160 170 180 190 200 210 220 230 240 m402.pep
AAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIENKHGIVAVY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
AAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIENKHGIVAVY 190
200 210 220 230 240 250 260 270 280 290 300 m402.pep
HRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGLSTGSWARVLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
HRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGLSTGSWARVLS 250
260 270 280 290 300 310 320 330 340 350 360 m402.pep
AIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLRRHPDEKFDLILM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
AIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLRRHPDEKFDLILM 310
320 330 340 350 360 370 380 390 400 410 420 m402.pep
NTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATAVHSIPYAYRYGHMV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
NTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATAVHSIPYAYRYGHMV 370
380 390 400 410 420 430 440 450 460 470 480 m402.pep
VGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKVVSRMLIQMTEPSAGAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a402
VGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKVVSRMLIQMTEPSAGAE 430
440 450 460 470 480 490 m402.pep VITDDNMIVEYKYGRGIX
|||||||||||||||||| a402 VITDDNMIVEYKYGRGIX 490
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1325>:
TABLE-US-01633 g406.seq 1 ATGCGGGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGCAAACGCT 101 TCGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 AACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGCGGC GAATACATAA
ACAGCCCTGC CGTCCGCACC 301 GATTACACCT ATCCGCGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACGGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CGCGCACCCA ATCAGACGGT AGCGGAAGTA
GGAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CCAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTGCA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACAGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCCA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGGCCGTATA AAGTAAGCAA 801 AGGAATCAAA CCGACGGAAG GATTGATGGT
CGATTTCTCC GATATCCAAC 851 CATACGGCAA TCATACGGGT AACTCCGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GCAGTGCGAC AACATAGACA 951 AGGGCAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 1326; ORF
406>:
TABLE-US-01634 g406.pep 1 MRARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSRSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIQPYGNHTG NSAPSVEADN 301 SHEGYGYSDE AVRQHRQGQP *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1327>:
TABLE-US-01635 m406.seq 1 ATGCAAGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGTAAACGCT 101 TTGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 CACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGTGGC GAATACATAA
ACAGCCCTGC CGTCCGTACC 301 GATTACACCT ATCCACGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACAGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CTCGCACCCA ATCAGACGGT AGCGGAAGTA
AAAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CTAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTACA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACAGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCAA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGGCCGTATA AAGTAAGCAA 801 AGGAATTAAA CCGACGGAAG GATTAATGGT
CGATTTCTCC GATATCCGAC 851 CATACGGCAA TCATACGGGT AACTCCGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GTAGTGCGAC AACATAGACA 951 AGGACAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 1328; ORF
406>:
TABLE-US-01636 m406.pep 1 MQARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSKSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIRPYGNHTG NSAPSVEADN 301 SHEGYGYSDE VVRQHRQGQP *
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 406 shows 98.8% identity over a 320 aa overlap with a
predicted ORF (ORF406.a) from N. gonorrhoeae:
TABLE-US-01637 g406/m406 10 20 30 40 50 60 g406.pep
MRARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR 10 20
30 40 50 60 70 80 90 100 110 120 g406.pep
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG 70 80
90 100 110 120 130 140 150 160 170 180 g406.pep
LTTSLSTLNAPALSRTQSDGSGSRSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m406
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF 130
140 150 160 170 180 190 200 210 220 230 240 g406.pep
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m406
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL 190
200 210 220 230 240 250 260 270 280 290 300 g406.pep
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIQPYGNHTGNSAPSVEADN
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| m406
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIRPYGNHTGNSAPSVEADN 250
260 270 280 290 300 310 320 g406.pep SHEGYGYSDEAVRQHRQGQPX
||||||||||:|||||||||| m406 SHEGYGYSDEVVRQHRQGQPX 310 320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1329>:
TABLE-US-01638 a406.seq 1 ATGCAAGCAC GGCTGCTGAT ACCTATTCTT
TTTTCAGTTT TTATTTTATC 51 CGCCTGCGGG ACACTGACAG GTATTCCATC
GCATGGCGGA GGTAAACGCT 101 TCGCGGTCGA ACAAGAACTT GTGGCCGCTT
CTGCCAGAGC TGCCGTTAAA 151 GACATGGATT TACAGGCATT ACACGGACGA
AAAGTTGCAT TGTACATTGC 201 AACTATGGGC GACCAAGGTT CAGGCAGTTT
GACAGGGGGT CGCTACTCCA 251 TTGATGCACT GATTCGTGGC GAATACATAA
ACAGCCCTGC CGTCCGTACC 301 GATTACACCT ATCCACGTTA CGAAACCACC
GCTGAAACAA CATCAGGCGG 351 TTTGACAGGT TTAACCACTT CTTTATCTAC
ACTTAATGCC CCTGCACTCT 401 CGCGCACCCA ATCAGACGGT AGCGGAAGTA
AAAGCAGTCT GGGCTTAAAT 451 ATTGGCGGGA TGGGGGATTA TCGAAATGAA
ACCTTGACGA CTAACCCGCG 501 CGACACTGCC TTTCTTTCCC ACTTGGTACA
GACCGTATTT TTCCTGCGCG 551 GCATAGACGT TGTTTCTCCT GCCAATGCCG
ATACGGATGT GTTTATTAAC 601 ATCGACGTAT TCGGAACGAT ACGCAACAGA
ACCGAAATGC ACCTATACAA 651 TGCCGAAACA CTGAAAGCCC AAACAAAACT
GGAATATTTC GCAGTAGACA 701 GAACCAATAA AAAATTGCTC ATCAAACCAA
AAACCAATGC GTTTGAAGCT 751 GCCTATAAAG AAAATTACGC ATTGTGGATG
GGACCGTATA AAGTAAGCAA 801 AGGAATTAAA CCGACAGAAG GATTAATGGT
CGATTTCTCC GATATCCAAC 851 CATACGGCAA TCATATGGGT AACTCTGCCC
CATCCGTAGA GGCTGATAAC 901 AGTCATGAGG GGTATGGATA CAGCGATGAA
GCAGTGCGAC GACATAGACA 951 AGGGCAACCT TGA
This corresponds to the amino acid sequence <SEQ ID 1330; ORF
406.a>:
TABLE-US-01639 a406.pep 1 MQARLLIPIL FSVFILSACG TLTGIPSHGG
GKRFAVEQEL VAASARAAVK 51 DMDLQALHGR KVALYIATMG DQGSGSLTGG
RYSIDALIRG EYINSPAVRT 101 DYTYPRYETT AETTSGGLTG LTTSLSTLNA
PALSRTQSDG SGSKSSLGLN 151 IGGMGDYRNE TLTTNPRDTA FLSHLVQTVF
FLRGIDVVSP ANADTDVFIN 201 IDVFGTIRNR TEMHLYNAET LKAQTKLEYF
AVDRTNKKLL IKPKTNAFEA 251 AYKENYALWM GPYKVSKGIK PTEGLMVDFS
DIQPYGNHMG NSAPSVEADN 301 SHEGYGYSDE AVRRHRQGQP * m406/a406 98.8%
identity in 320 aa overlap 10 20 30 40 50 60 m406.pep
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAASARAAVKDMDLQALHGR 10 20
30 40 50 60 70 80 90 100 110 120 m406.pep
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
KVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDYTYPRYETTAETTSGGLTG 70 80
90 100 110 120 130 140 150 160 170 180 m406.pep
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
LTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNETLTTNPRDTAFLSHLVQTVF 130
140 150 160 170 180 190 200 210 220 230 240 m406.pep
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a406
FLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNAETLKAQTKLEYFAVDRTNKKLL 190
200 210 220 230 240 250 260 270 280 290 300 m406.pep
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIRPYGNHTGNSAPSVEADN
||||||||||||||||||||||||||||||||||||||||||:||||| ||||||||||| a406
IKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLMVDFSDIQPYGNHMGNSAPSVEADN 250
260 270 280 290 300 310 320 m406.pep SHEGYGYSDEVVRQHRQGQPX
||||||||||:||:||||||| a406 SHEGYGYSDEAVRRHRQGQPX 310 320
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1331>:
TABLE-US-01640 g501.seq 1 atggtcggac ggaccttgac cgcagatacc
gacatatttg ttctgcttgc, 51 ggcaggcgga gatggcaaga tgcagcatca
ctttgacggc agggttgcgt 101 tcgtcaaacg attcggacac caagccgctg
tctcggtcga ggccgagggt 151 cagctgggtc atgtcgttcg agccgatgga
gaagccgtcg aagtattgca 201 ggaattgttc cgccaatacc gcgttgctcg
gcagctcgca catcataatc 251 aggcgcaggc cgtttttgcc gcgttccaag
ccgttttctt tcaatgcctt 301 aaccactgct tcggcttcgc ccaaagtgcg
gacgaacgga atcatgattt 351 cgacgttggt cagacccatt tcgtcacgaa
cgcgtttcaa ggctttgcat 401 tccaaggcga aacagtcttt gaagctctcg
gcaacataac gcgccgcacc 451 acggaagccc aacatcgggt tttcttcatg
cggttcgtat acgctgccgc 501 cgaccaggtt ggcgtattcg ttggatttga
agtcggacat acggacgatg 551 gttttacgcg gataaaccga tgcggcaagc
gttgccacgc cttcggcgat 601 tttatcgacg tagaagtcga caggggatgc
gtaaccggcg atgcggcgga 651 taatttccgc tttcagttcg tcgtcttgtt
tgtcaaattc caacaaggct 701 ttcgggtgga tgccgatttg gcggttgatg
ataaattcca tacgcgccaa 751 gccgatgcct tcgctgggca gattggcgaa
gctgaatgcg agttcgggat 801 tgccgacgtt catcatgact ttgacgggtg
cttttggcat attgtccaag 851 gcgacatcgg taatttgtac gtccagcagg
ccggcataga taaagccggt 901 atcgccttcg gcacaggata cggtaacttc
ctgaccgttt tccaagagtt 951 cggtcgcatt gccgcagccg acgacggcag
gaatacccag ttcgcgcgcg 1001 atgatggcgg cgtggcaggt gcgtccgccg
cggttggtca cgatggcgga 1051 agcacgtttc atcacgggtt cccaatccgg
atcggtcatg tcggtaacca 1101 gtacgtcgcc ggcttcgacg gaatccatct
cggaagcatc tttaatcagg 1151 cgcaccttgc cctgaccgac tttttgaccg
atggcacgac cttcgcacaa 1201 gacggttttt tcgccgttga tggcgtagcg
gcgcaggttg cggctgcctt 1251 cttcttggga tttgacggtt tcggggcggg
cttgcaggat gtagagtttg 1301 ccgtccaggc cgtcgcgtcc ccattcgata
tccatcgggc ggccgtagtg 1351 tttttcgatg gtcagcgcgt agtgtgccaa
ctcggtgatt tcttcgtcgg 1401 taatggagaa gcggttgcgg tcttcttcgg
ggacttcgac gttggttacc 1451 gatttgccgg cttcggcttt gtcggtgaaa
atcattttga tgtgtttcga 1501 acccatggtc ttgcgcagga tggcgggttt
gcctgctttg agcgtgggtt 1551 tgaacacata aaattcgtcc gggttgaccg
cgccttgtac gacgttttcg 1601 cccagaccgt aagaggaggt aacaaagacg
acttggttgt agccggattc 1651 ggtgtcgagg gtgaacatca cacctga
This corresponds to the amino acid sequence <SEQ ID 1332; ORF
501.ng>:
TABLE-US-01641 g501.pep 1 MVGRTLTADT DIFVLLAAGG DGKMQHHFDG
RVAFVKRFGH QAAVSVEAEG 51 QLGHVVRADG EAVEVLQELF RQYRVARQLA
HHNQAQAVFA AFQAVFFQCL 101 NHCFGFAQSA DERNHDFDVG QTHFVTNAFQ
GFAFQGETVF EALGNITRRT 151 TEAQHRVFFM RFVYAAADQV GVFVGFEVGH
TDDGFTRINR CGKRCHAFGD 201 FIDVEVDRGC VTGDAADNFR FQFVVLFVKF
QQGFRVDADL AVDDKFHTRQ 251 ADAFAGQIGE AECEFGIADV HHDFDGCFWH
IVQGDIGNLY VQQAGIDKAG 301 IAFGTGYGNF LTVFQEFGRI AAADDGRNTQ
FARDDGGVAG ASAAVGHDGG 351 STFHHGFPIR IGHVGNQYVA GFDGIHLGSI
FNQAHLALTD FLTDGTTFAQ 401 DGFFAVDGVA AQVAAAFFLG FDGFGAGLQD
VEFAVQAVAS PFDIHRAAVV 451 FFDGQRVVCQ LGDFFVGNGE AVAVFFGDFD
VGYRFAGFGF VGENHFDVFR 501 THGLAQDGGF ACFERGFEHI KFVRVDRALY
DVFAQTVRGG NKDDLVVAGF 551 GVEGEHHT*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1333>:
TABLE-US-01642 m501.seq 1 atggtcggac sggccttgac cgcagatgcc
gacatatttg ttctgcttgc 51 ggcaggcgga gatggcaagg tgcagcatca
ctttgacggc agggttgcgt 101 tcgtcaaacg attcggatac caagccgctg
tcgcggtcga gaccgagggt 151 cagttgggtc atgtcgttcg agccgatgga
gaagccgtcg aagtattgca 201 ggaattgttc cgccaatacc gcgttgctcg
gcagctcgca catcataatc 251 aggcgcaggc cgtttttgcc gcgttccaag
ccgttttctt tcagggcttt 301 gacaacggmt tcggcttcgc ccaaagtgcg
gacgaacgga atcatgattt 351 caacgttggy caaccccatt tcatcgcgga
cgcgtttcaa ggctttgcat 401 tccaaggcga aacagtcttt gaagttgtcg
gcgacataac gcgccgcacc 451 acggaagccc aacatcgggt tttcttcatg
cggttcgtat acgttgccgc 501 cgaccaggtt ggcgtattcg ttggatttga
agtcggacat acggacgatg 551 gttttacgcg gataaaccga tgcggccaat
gtcgccacgc cttcggcgat 601 tttatcgacg tagaagtcga caggggacgc
gtaaccggcg atacggcggg 651 taatttccgc ttttaattcg tcgtcttgtt
tgtcaaattc caacaargct 701 ttggggtgga taccgatttg gcggttgatg
ataaattcca tacgcgccaa 751 gccgatgcct tcgctgggca ggttggcgaa
gctgaatgcg agttcgggat 801 tgccgacgtt catcatgact tttacaggtg
ctttaggcat attgtctaag 851 gcgacatcgg taatctgtac gtccaacaga
ccggcataga taaagccggt 901 atcgccttcg gcacaggata cggtaacttc
ttgaccgttt ttcagcaatt 951 cggttgcatt gccgcagccg acaacggcag
gaatgcccaa ttcacgcgcg 1001 atgatggcgg cgtggcaggt acggccgccg
cggttggtaa cgatggcaga 1051 agcacgtttc atcacgggtt cccaatccgg
atcggtcatg tcggtaacga 1101 gtacgtcgcc ggcttcgacg gaatccatct
cggaagcatc tttaatcagg 1151 cgcaccttgc cctgaccgac tttctgaccg
atggcgcggc cttcgcataa 1201 tacggttttg tcgccgttga tggcgaagcg
gcgcaggttg cggttgccct 1251 cttcttggga ttttacggtt tcgggacggg
cttgcaggat gtagagtttg 1301 ccgtccaagc cgtcgcgtcc ccattcgata
tccatcgggc ggccgtagtg 1351 tttttcgatg gtcagtgcgt aatgcgccaa
ctcagtaatt tcttcgtcgg 1401 taatggagaa gcggttgcgg tcttcctcgg
ggacatcgac gttggttacg 1451 gatttaccgg cttctgcttt gtcggtaaaa
atcattttga tgtgttttga 1501 acccatggtt ttacgcagga tggcgggctt
gcccgytttg agcgtgggtt 1551 tgaacacatr aaattcgtcc gggttgaccg
caccttgtac gacgttttcg 1601 cccagaccgt aagaggaggt aacaaagacg
acytgatcgt akccggattc 1651 ggtgtcgagg gtgaacatca cacctga
This corresponds to the amino acid sequence <SEQ ID 1334; ORF
501>:
TABLE-US-01643 m501.pep 1 MVGXALTADA DIFVLLAAGG DGKVQHHFDG
RVAFVKRFGY QAAVAVETEG 51 QLGHVVRADG EAVEVLQELF RQYRVARQLA
HHNQAQAVFA AFQAVFFQGF 101 DNGFGFAQSA DERNHDFNVG QPHFIADAFQ
GFAFQGETVF EVVGDITRRT 151 TEAQHRVFFM RFVYVAADQV GVFVGFEVGH
TDDGFTRINR CGQCRHAFGD 201 FIDVEVDRGR VTGDTAGNFR FXFVVLFVKF
QQXFGVDTDL AVDDKFHTRQ 251 ADAFAGQVGE AECEFGIADV HHDFYRCFRH
IVXGDIGNLY VQQTGIDKAG 301 IAFGTGYGNF LTVFQQFGCI AAADNGRNAQ
FTRDDGGVAG TAAAVGNDGR 351 STFHHGFPIR IGHVGNEYVA GFDGIHLGSI
FNQAHLALTD FLTDGAAFAX 401 YGFVAVDGEA AQVAVALFLG FYGFGTGLQD
VEFAVQAVAS PFDIHRAAVV 451 FFDGQCVMRQ LSNFFVGNGE AVAVFLGDID
VGYGFTGFCF VGKNHFDVFX 501 THGFTQDGGL ARFERGFEHX KFVRVDRTLY
DVFAQTVRGG NKDDLIVXGF 551 GVEGEHHT*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 501
shows 86.2% identity over a 558 aa overlap with a predicted ORF
(ORF 501.ng) from N. gonorrhoeae:
TABLE-US-01644 m501/g501 10 20 30 40 50 60 m501.pep
MVGXALTADADIFVLLAAGGDGKVQHHFDGRVAFVKRFGYQAAVAVETEGQLGHVVRADG |||
:||||:|||||||||||||:|||||||||||||||:||||:||:|||||||||||| g501
MVGRTLTADTDIFVLLAAGGDGKMQHHFDGRVAFVKRFGHQAAVSVEAEGQLGHVVRADG 10 20
30 40 50 60 70 80 90 100 110 120 m501.pep
EAVEVLQELFRQYRVARQLAHHNQAQAVFAAFQAVFFQGFDNGFGFAQSADERNHDFNVG
|||||||||||||||||||||||||||||||||||||| ::: ||||||||||||||:|| g501
EAVEVLQELFRQYRVARQLAHHNQAQAVFAAFQAVFFQCLNHCFGFAQSADERNHDFDVG 70 80
90 100 110 120 130 140 150 160 170 180 m501.pep
QPHFIADAFQGFAFQGETVFEVVGDITRRTTEAQHRVFFMRFVYVAADQVGVFVGFEVGH |
||:::||||||||||||||::|:|||||||||||||||||||:||||||||||||||| g501
QTHFVTNAFQGFAFQGETVFEALGNITRRTTEAQHRVFFMRFVYAAADQVGVFVGFEVGH 130
140 150 160 170 180 190 200 210 220 230 240 m501.pep
TDDGFTRINRCGQCRHAFGDFIDVEVDRGRVTGDTAGNFRFXFVVLFVKFQQXFGVDTDL
||||||||||||: |||||||||||||| ||||:| |||| |||||||||| | ||:|| g501
TDDGFTRINRCGKRCHAFGDFIDVEVDRGCVTGDAADNFRFQFVVLFVKFQQGFRVDADL 190
200 210 220 230 240 250 260 270 280 290 300 m501.pep
AVDDKFHTRQADAFAGQVGEAECEFGIADVHHDFYRCFRHIVXGDIGNLYVQQTGIDKAG
|||||||||||||||||:|||||||||||||||| || ||| ||||||||||:|||||| g501
AVDDKFHTRQADAFAGQIGEAECEFGIADVHHDFDGCFWHIVQGDIGNLYVQQAGIDKAG 250
260 270 280 290 300 310 320 330 340 350 360 m501.pep
IAFGTGYGNFLTVFQQFGCIAAADNGRNAQFTRDDGGVAGTAAAVGNDGRSTFHHGFPIR
|||||||||||||||:|| |||||:|||:||:||||||||::||||:|| |||||||||| g501
IAFGTGYGNFLTVFQEFGRIAAADDGRNTQFARDDGGVAGASAAVGHDGGSTFHHGFPIR 310
320 330 340 350 360 370 380 390 400 410 420 m501.pep
IGHVGNEYVAGFDGIHLGSIFNQAHLALTDFLTDGAAFAXYGFVAVDGEAAQVAVALFLG
||||||:||||||||||||||||||||||||||||::|| || |||| |||||:|:||| g501
IGHVGNQYVAGFDGIHLGSIFNQAHLALTDFLTDGTTFAQDGFFAVDGVAAQVAAAFFLG 370
380 390 400 410 420 430 440 450 460 470 480 m501.pep
FYGFGTGLQDVEFAVQAVASPFDIHRAAVVFFDGQCVMRQLSNFFVGNGEAVAVFLGDID |
|||:||||||||||||||||||||||||||||| |: ||::||||||||||||:||:| g501
FDGFGAGLQDVEFAVQAVASPFDIHRAAVVFFDGQRVVCQLGDFFVGNGEAVAVFFGDFD 430
440 450 460 470 480 490 500 510 520 530 540 m501.pep
VGYGFTGFCFVGKNHFDVFXTHGFTQDGGLARFERGFEHXKFVRVDRTLYDVFAQTVRGG |||
|:|| |||:|||||| |||::||||:| ||||||| |||||||:|||||||||||| g501
VGYRFAGFGFVGENHFDVFRTHGLAQDGGFACFERGFEHIKFVRVDRALYDVFAQTVRGG 490
500 510 520 530 540 550 m501.pep NKDDLIVXGFGVEGEHHT |||||:|
|||||||||| g501 NKDDLVVAGFGVEGEHHT 550
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1335>:
TABLE-US-01645 a501.seq (partial) 1 ATGGTCGGAC GGGCCTTGAC
CGCAGATGCC GACATATTTG TTCTGCTTGC 51 GGCAGGCGGA GATGGCAAGG
TGCAGCATCA CTTTGACGGC AGGGTTGCGT 101 TCGTCAAACG ATTCGGATAC
CAAGCCGCTG TCGCGGTCGA GACCGAGGGT 151 CAGTTGGGTC ATGTCGTTCG
AGCCGATGGA GAAGCCGTCG AAGTATTGCA 201 GGAATTGTTC CGCCAATACC
GCGTTGCTCG GCAGCTCGCA CATCATAATC 251 AGGCGCAGGC CGTTTTTGCC
GCGTTCCAAG CCGTTTTCTT TCAGGGCTTT 301 GACAACGGCT TCGGCTTCGC
CCAAAGTGCG GACGAACGGA ATCATGATTT 351 CAACGTTGGT CAACCCCATT
TCATCGCGGA CGCGTTTCAA GGCTTTGCAT 401 TCCAAGGCGA AACAGTCTTT
GAAGTTGTCG GCGACATAAC GCGCCGCACC 451 ACGGAAGCCC AACATCGGGT
TTTCTTCATG CGGTTCGTAT ACGTTGCCGC 501 CGACCAGGTT GGCGTATTCG
TTGGATTTGA AGTCGGACAT ACGGACGATG 551 GTTTTACGCG GATAAACCGA
TGCGGCCAAT GTCGCCACGC CTTCGGCGAT 601 TTTATCGACG TAGAAGTCGA
CAGGGGACGC GTAACCGGCG ATACGGCGGG 651 TAATTTCCGC TTTTAATTCG
TCGTCTTGTT TGTCAAATTC CAACAAGGCT 701 TTGGGGTGGA TACCGATTTG
GCGGTTGATG ATAAATTCCA TACGCGCCAA 751 GCCGATGCCT TCGCTGGGCA
GGTTGGCGAA GCTGAATGCG AGTTCGGGAT 801 TGCCGACGTT CATCATGACT
TTTACAGGTG CTTTAGGCAT GTTGTCCAAA 851 GCAACATCGG TAATTTGTAC
GTCCAGCAGG CCGGAGTAGA TGAAGCCGGT 901 ATCGCCTTCG GCACAGGATA
CGGTAACTTC TTGACCGTTT TTCAGCAATT 951 CGGTTGCATT GCCGCAGCCG
ACAACGGCAG GAATACCCAG TTCGCGCGCG 1001 ATGATGGCGG CGTGGCAGGT
ACGTCCGCCC CTGTTGGTCA CGATGGCGGA 1051 AGCGCGTTTC ATCACCGGTT
CCCAATCTGG GTCGGTCATG TCGGTAACCA 1101 GTACGTCGCC GGCTTCGACG
GAATCCATCT CGGAAGCATC TTTAATCAGG 1151 CGTACCTTGC CCTGACCGAC
TTTCTGACCG ATGGCGCGGC CTTCGCACAA 1201 GACGGTTTTT TCGCCGTTGA
TAGAAAAGCG GCGCAGGTTG CGGCTGCCTT 1251 CTTCCTGGGA TTTGACGGTT
TCGGGACGGG CTTGCAGGAT GTAGAGTTTG 1301 CCGTCCAAGC CGTCGCGTCC
CCATTCGATG TCCATCGGGC GGCCGTAGTG 1351 TTTTTCGATG GTCAGTGCGT
AATGCGCCAA CTCGGTGATT TCTTCGTCGG 1401 TAATGGAGAA GCGGTTGCGG
TCTTCTTCGG GGACATCGAC GTTGGTTACC 1451 GATTTGCCGG CTTCTGCTTT
GTCGGTAAAA ATCATTTTGA TGTGTTTTGA 1501 GCCCATGGTT TTGCGCAGGA
TGGCAGGTTT GCCTGCTTTC AGCGTGGGTT 1551 TGAACACATA GAATTCGTCG
GGATTGACTG CGCCTTGTAC GACGTTTTCG 1601 CCCAGACCGT AGGATGAAGT
GACAAAGACG ACTTGGTCGT AACCGGATTC 1651 GGTATCGAGG GTGAACATCA C
This corresponds to the amino acid sequence <SEQ ID 1336; ORF
501.a>:
TABLE-US-01646 a501.pep 1 MVGRALTADA DIFVLLAAGG DGKVQHHFDG
RVAFVKRFGY QAAVAVETEG 51 QLGHVVRADG EAVEVLQELF RQYRVARQLA
HHNQAQAVFA AFQAVFFQGF 101 DNGFGFAQSA DERNHDFNVG QPHFIADAFQ
GFAFQGETVF EVVGDITRRT 151 TEAQHRVFFM RFVYVAADQV GVFVGFEVGH
TDDGFTRINR CGQCRHAFGD 201 FIDVEVDRGR VTGDTAGNFR F*FVVLFVKF
QQGFGVDTDL AVDDKFHTRQ 251 ADAFAGQVGE AECEFGIADV HHDFYRCFRH
VVQSNIGNLY VQQAGVDEAG 301 IAFGTGYGNF LTVFQQFGCI AAADNGRNTQ
FARDDGGVAG TSAPVGHDGG 351 SAFHHRFPIW VGHVGNQYVA GFDGIHLGSI
FNQAYLALTD FLTDGAAFAQ 401 DGFFAVDRKA AQVAAAFFLG FDGFGTGLQD
VEFAVQAVAS PFDVHRAAVV 451 FFDGQCVMRQ LGDFFVGNGE AVAVFFGDID
VGYRFAGFCF VGKNHFDVF* 501 AHGFAQDGRF ACFQRGFEHI EFVGIDCALY
DVFAQTVG*S DKDDLVVTGF 551 GIEGEHH m501/a501 90.3% identity in 557
aa overlap 10 20 30 40 50 60 m501.pep
MVGXALTADADIFVLLAAGGDGKVQHHFDGRVAFVKRFGYQAAVAVETEGQLGHVVRADG |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a501
MVGRALTADADIFVLLAAGGDGKVQHHFDGRVAFVKRFGYQAAVAVETEGQLGHVVRADG 10 20
30 40 50 60 70 80 90 100 110 120 m501.pep
EAVEVLQELFRQYRVARQLAHHNQAQAVFAAFQAVFFQGFDNGFGFAQSADERNHDFNVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a501
EAVEVLQELFRQYRVARQLAHHNQAQAVFAAFQAVFFQGFDNGFGFAQSADERNHDFNVG 70 80
90 100 110 120 130 140 150 160 170 180 m501.pep
QPHFIADAFQGFAFQGETVFEVVGDITRRTTEAQHRVFFMRFVYVAADQVGVFVGFEVGH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a501
QPHFIADAFQGFAFQGETVFEVVGDITRRTTEAQHRVFFMRFVYVAADQVGVFVGFEVGH 130
140 150 160 170 180 190 200 210 220 230 240 m501.pep
TDDGFTRINRCGQCRHAFGDFIDVEVDRGRVTGDTAGNFRFXFVVLFVKFQQXFGVDTDL
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| a501
TDDGFTRINRCGQCRHAFGDFIDVEVDRGRVTGDTAGNFRFXFVVLFVKFQQGFGVDTDL 190
200 210 220 230 240 250 260 270 280 290 300 m501.pep
AVDDKFHTRQADAFAGQVGEAECEFGIADVHHDFYRCFRHIVXGDIGNLYVQQTGIDKAG
||||||||||||||||||||||||||||||||||||||||:| ::||||||||:|:|:|| a501
AVDDKFHTRQADAFAGQVGEAECEFGIADVHHDFYRCFRHVVQSNIGNLYVQQAGVDEAG 250
260 270 280 290 300 310 320 330 340 350 360 m501.pep
IAFGTGYGNFLTVFQQFGCIAAADNGRNAQFTRDDGGVAGTAAAVGNDGRSTFHHGFPIR
||||||||||||||||||||||||||||:||:|||||||||:| ||:|| |:||| ||| a501
IAFGTGYGNFLTVFQQFGCIAAADNGRNTQFARDDGGVAGTSAPVGHDGGSAFHHRFPIW 310
320 330 340 350 360 370 380 390 400 410 420 m501.pep
IGHVGNEYVAGFDGIHLGSIFNQAHLALTDFLTDGAAFAXYGFVAVDGEAAQVAVALFLG
:|||||:|||||||||||||||||:|||||||||||||| || ||| :|||||:|:||| a501
VGHVGNQYVAGFDGIHLGSIFNQAYLALTDFLTDGAAFAQDGFFAVDRKAAQVAAAFFLG 370
380 390 400 410 420 430 440 450 460 470 480 m501.pep
FYGFGTGLQDVEFAVQAVASPFDIHRAAVVFFDGQCVMRQLSNFFVGNGEAVAVFLGDID |
|||||||||||||||||||||:|||||||||||||||||::||||||||||||:|||| a501
FDGFGTGLQDVEFAVQAVASPFDVHRAAVVFFDGQCVMRQLGDFFVGNGEAVAVFFGDID 430
440 450 460 470 480 490 500 510 520 530 540 m501.pep
VGYGFTGFCFVGKNHFDVFXTHGFTQDGGLARFERGFEHXKFVRVDRTLYDVFAQTVRGG |||
|:||||||||||||||:|||:||| :| |:||||| :|| :| :||||||||| : a501
VGYRFAGFCFVGKNHFDVFXAHGFAQDGRFACFQRGFEHIEFVGIDCALYDVFAQTVGXS 490
500 510 520 530 540 550 559 m501.pep NKDDLIVXGFGVEGEHHTX
:||||:|:|||:||||| a501 DKDDLVVTGFGIEGEHH 550
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1337>:
TABLE-US-01647 g502.seq 1 atgatgaaac cgcacaacct gttccaattc
ctcgccgttt gctccctgac 51 cgtcgccgtc gcttccgcac aggcgggcgc
ggtggacgcg ctcaagcaat 101 tcaacaacga tgccgacggt atcagcggca
gcttcaccca aaccgtccaa 151 agcaaaaaga aaacccaaac cgcgcacggc
acgttcaaaa tcctgcgccc 201 gggcctcttc aaatgggaat acactttgcc
ctacagacag actattgtcg 251 gcgacggtca aaccgtttgg ctctacgatg
ttgatttggc acaagtgacc 301 aagtcgtccc aagaccaggc catcggcggc
agccccgccg ccatcctgtc 351 gaacaaaacc gccctcgaaa gcagttacac
gctgaaagag gacggttcgt 401 ccaacggcat cgattatgtg cggggcaacg
cccaaacgca acaacgccgg 451 ctaccaatac atccgcatcg gcttcaaagg
cggcaacctc gccgccatgc 501 agcttaa
This corresponds to the amino acid sequence <SEQ ID 1338; ORF
502.ng>:
TABLE-US-01648 g502.pep 1 MMKPHNLFQF LAVCSLTVAV ASAQAGAVDA
LKQFNNDADG ISGSFTQTVQ 51 SKKKTQTAHG TFKILRPGLF KWEYTLPYRQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGG SPAAILSNKT ALESSYTLKE
DGSSNGIDYV RGNAQTQQRR 151 LPIHPHRLQR RQPRRHAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1339>:
TABLE-US-01649 m502.seq 1 atgatgaaac cgcacaacct gttccaattc
ctcgccgttt gctccctgac 51 cgtcgccgtc gcttccgcac aggcgggcgc
ggtagacgcg cttaagcaat 101 tcaacaacga tgccgacggt atcagcggca
gcttcaccca amccgtccaa 151 wgcaaaaaga aaacccaaac cgcgcacggc
acgttcaaaa tcctgcgacc 201 gggccttttc aaatgggaat acaccaaact
t.acaggcaa accatcgtcg 251 gcgacggtca aacygtttgg ctmtacgatg
tygatctggc acaagtgacc 301 aagtcgtccc aagaccaggc cataggcgsc
agccccgccg ccatcctgtc 351 gaacaaarcc gccctcgaaa gcagctacac
gctgaaagag gacggttcgt 401 ccaacggcat cgattatgtg ggcaacgccc
aaacgcaaca acgccggcta 451 ccaatacatc cgcatcggct tcaaaggcgg
caacctcgcc gccatgcagc 501 tyaa
This corresponds to the amino acid sequence <SEQ ID 1340; ORF
502.ng>:
TABLE-US-01650 m502.pep 1 MMKPHNLFQF LAVCSLTVAV ASAQAGAVDA
LKQFNNDADG ISGSFTQXVQ 51 XKKKTQTAHG TFKILRPGLF KWEYTKLYRQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGX SPAAILSNKX ALESSYTLKE
DGSSNGIDYV GNAQTQQRRL 151 PIHPHRLQRR QPRRHAAX
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 502
shows 95.8% identity over a 168 aa overlap with a predicted ORF
(ORF 502.ng) from N. gonorrhoeae:
TABLE-US-01651 m502/g502 10 20 30 40 50 60 m502.pep
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQXVQXKKKTQTAHG
|||||||||||||||||||||||||||||||||||||||||||||||:|| ||||||||| g502
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQTVQSKKKTQTAHG 10 20
30 40 50 60 70 80 90 100 110 120 m502.pep
TFKILRPGLFKWEYTKLYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGXSPAAILSNKX
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||: g502
TFKILRPGLFKWEYTLPYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT 70 80
90 100 110 120 130 140 150 160 m502.pep
ALESSYTLKEDGSSNGIDYV-GNAQTQQRRLPIHPHRLQRRQPRRHAA
|||||||||||||||||||| ||||||||||||||||||||||||||| g502
ALESSYTLKEDGSSNGIDYVRGNAQTQQRRLPIHPHRLQRRQPRRHAA 130 140 150
160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1341>:
TABLE-US-01652 a502.seq 1 ATGATGAAAC CGCACAACCT GTTCCAATTC
CTCGCCGTTT GCTCCCTGAC 51 CGTCTCCGTC GCTTCCGCAC AGGCGGGCGC
GGTGGACGCG CTCAAGCAAT 101 TCAACAACGA TGCCGACGGT ATCAGCGGCA
GCTTCACCCA AACCGTCCAA 151 AGCAAAAAGA AAACCCAAAC CGCGCACGGC
ACGTTCAAAA TCCTGCGCCC 201 GGGCCTCTTT AAATGGGAAT ACACTTCGCC
TTACAAACAG ACTATTGTCG 251 GCGACGGTCA AACCGTTTGG CTCTACGATG
TCGATTTGGC ACAAGTGACC 301 AAGTCGTCCC AAGACCAGGC CATAGGCGGC
AGCCCCGCCG CCATCCTGTC 351 GAACAAAACC GCCCTCGAAA GCAGCTACAC
GCTGAAAGAG GACGGTTCGT 401 CCAACGGCAT CGATTATGTG GGCAACGCCC
AAACGCAACA ACGCCGGCTA 451 CCAATACATC CGCATCGGCT TCAAAGGCGG
CAACCTCGCC GCCATGCAGC 501 TTAA
This corresponds to the amino acid sequence <SEQ ID 1342; 502
217.a>:
TABLE-US-01653 a502.pep 1 MMKPHNLFQF LAVCSLTVSV ASAQAGAVDA
LKQFNNDADG ISGSFTQTVQ 51 SKKKTQTAHG TFKILRPGLF KWEYTSPYKQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGG SPAAILSNKT ALESSYTLKE
DGSSNGIDYV GNAQTQQRRL 151 PIHPHRLQRR QPRRHAA* m502/a502 95.2%
identity in 167 aa overlap 10 20 30 40 50 60 m502.pep
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQXVQXKKKTQTAHG
||||||||||||||||||:||||||||||||||||||||||||||||:|| ||||||||| a502
MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGSFTQTVQSKKKTQTAHG 10 20
30 40 50 60 70 80 90 100 110 120 m502.pep
TFKILRPGLFKWEYTKLYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGXSPAAILSNKX
|||||||||||||||: |:|||||||||||||||||||||||||||||| |||||||||: a502
TFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT 70 80
90 100 110 120 130 140 150 160 m502.pep
ALESSYTLKEDGSSNGIDYVGNAQTQQRRLPIHPHRLQRRQPRRHAAX
|||||||||||||||||||||||||||||||||||||||||||||||| a502
ALESSYTLKEDGSSNGIDYVGNAQTQQRRLPIHPHRLQRRQPRRHAAX 130 140 150
160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1343>:
TABLE-US-01654 g502-1.seq 1 ATGatGAAAc cgcaCaacct gttccaaTTc
CTCGCCGTTT GCTCCCTGAC 51 CGTCGCCGTC GCTTCCGCAC AGGCGGGCGC
GGTGGACGCG CTCAAGCAAT 101 TCAACAACGA TGCCGACGGT ATCAGCGGCA
GCTTCACCCA AACCGTCCAA 151 AGCAAAAAGA AAACCCAAAC CGCGCACGGC
ACGTTCAAAA TCCTGCGCCC 201 GGGCCTCTTC AAATGGGAAT ACACTTTGCC
CTACAGACAG ACTATTGTCG 251 GCGACGGTCA AACCGTTTGG CTCTACGATG
TTGATTTGGC ACAAGTGACC 301 AAGTCGTCCC AAGACCAGGC CATCGGCGGC
AGCCCCGCCG CCATCCTGTC 351 GAACAAAACC GCCCTCGAAA GCAGTTACAC
GCTGAAAGAG GACGGTTCGT 401 CCAACGGCAT CGATTATGTG CGGGCAACGC
CCAAACGCAA CAACGCCGGC 451 TACCAATACA TCCGCATCGG CTTCAAAGGC
GGCAACCTCG CCGCCATGCA 501 GCTTAAAGAC AGCTTCGGCA ACCAAACCTC
CATCAGTTTC GGCGGTTTGA 551 ATACCAATCC CCAACTCTCG CGCGGCGCGT
TCAAGTTTAC CCCGCCCAAA 601 GGCGTGGACG TGTTGAGCAA CTGA
This corresponds to the amino acid sequence <SEQ ID 1344; ORF
502-1.ng>:
TABLE-US-01655 g502-1.pep 1 MMKPHNLFQF LAVCSLTVAV ASAQAGAVDA
LKQFNNDADG ISGSFTQTVQ 51 SKKKTQTAHG TFKILRPGLF KWEYTLPYRQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGG SPAAILSNKT ALESSYTLKE
DGSSNGIDYV RATPKRNNAG 151 YQYIRIGFKG GNLAAMQLKD SFGNQTSISF
GGLNTNPQLS RGAFKFTPPK 201 GVDVLSN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1345>:
TABLE-US-01656 m502-1.seq 1 ATGATGAAAC CGCACAACCT GTTCCAATTC
CTCGCCGTTT GCTCCCTGAC 51 CGTCGCCGTC GCTTCCGCAC AGGCGGGCGC
GGTAGACGCG CTTAAGCAAT 101 TCAACAACGA TGCCGACGGT ATCAGCGGCA
GCTTCACCCA AACCGTCCAA 151 AGCAAAAAGA AAACCCAAAC CGCGCACGGC
ACGTTCAAAA TCCTGCGACC 201 GGGCCTTTTC AAATGGGAAT ACACCAAACC
TTACAGGCAA ACCATCGTCG 251 GCGACGGTCA AACCGTTTGG CTCTACGATG
TTGATCTGGC ACAAGTGACC 301 AAGTCGTCCC AAGACCAGGC CATAGGCGGC
AGCCCCGCCG CCATCCTGTC 351 GAACAAAACC GCCCTCGAAA GCAGCTACAC
GCTGAAAGAG GACGGTTCGT 401 CCAACGGCAT CGATTATGTG CTGGCAACGC
CCAAACGCAA CAACGCCGGC 451 TACCAATACA TCCGCATCGG CTTCAAAGGC
GGCAACCTCG CCGCCATGCA 501 GCTTAAAGAC AGCTTCGGCA ACCAAACCTC
CATCAGTTTC GGCGGTTTGA 551 ATACCAATCC CCAACTCTCG CGCGGCGCGT
TCAAGTTTAC CCCGCCCAAA 601 GGCGTGGACG TGTTGAGCAA CTGA
This corresponds to the amino acid sequence <SEQ ID 1346; ORF
502-1>:
TABLE-US-01657 m502-1.pep 1 MMKPHNLFQF LAVCSLTVAV ASAQAGAVDA
LKQFNNDADG ISGSFTQTVQ 51 SKKKTQTAHG TFKILRPGLF KWEYTKPYRQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGG SPAAILSNKT ALESSYTLKE
DGSSNGIDYV LATPKRNNAG 151 YQYIRIGFKG GNLAAMQLKD SFGNQTSISF
GGLNTNPQLS RGAFKFTPPK 201 GVDVLSN* m502-1/g502-1 99.0% identity in
207 aa overlap 10 20 30 40 50 60 m502-1.pep
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQTVQSKKKTQTAHG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g502-1
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQLVQSKKKTQTAHG 10 20
30 40 50 60 70 80 90 100 110 120 m502-1.pep
TFKILRPGLFKWEYTKPYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| g502-1
TFKILRPGLFKWEYTLPYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT 70 80
90 100 110 120 130 140 150 160 170 180 m502-1.pep
ALESSYLLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISF
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| g502-1
ALESSYLLKEDGSSNGIDYVRATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISF 130
140 150 160 170 180 190 200 m502-1.pep GGLNTNPQLSRGAFKFTPPKGVDVLSNX
|||||||||||||||||||||||||||| g502-1 GGLNTNPQLSRGAFKFTPPKGVDVLSNX
190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1347>:
TABLE-US-01658 a502-1.seq 1 ATGATGAAAC CGCACAACCT GTTCCAATTC
CTCGCCGTTT GCTCCCTGAC 51 CGTCTCCGTC GCTTCCGCAC AGGCGGGCGC
GGTGGACGCG CTCAAGCAAT 101 TCAACAACGA TGCCGACGGT ATCAGCGGCA
GCTTCACCCA AACCGTCCAA 151 AGCAAAAAGA AAACCCAAAC CGCGCACGGC
ACGTTCAAAA TCCTGCGCCC 201 GGGCCTCTTT AAATGGGAAT ACACTTCGCC
TTACAAACAG ACTATTGTCG 251 GCGACGGTCA AACCGTTTGG CTCTACGATG
TCGATTTGGC ACAAGTGACC 301 AAGTCGTCCC AAGACCAGGC CATAGGCGGC
AGCCCCGCCG CCATCCTGTC 351 GAACAAAACC GCCCTCGAAA GCAGCTACAC
GCTGAAAGAG GACGGTTCGT 401 CCAACGGCAT CGATTATGTG CTGGCAACGC
CCAAACGCAA CAACGCCGGC 451 TACCAATACA TCCGCATCGG CTTCAAAGGC
GGCAACCTCG CCGCCATGCA 501 GCTTAAAGAC AGCTTCGGCA ATCAAACCTC
CATCAGTTTC GGCGGTTTGA 551 ATACCAATCC CCAACTCTCG CGCGGCGCGT
TCAAGTTTAC CCCGCCCAAA 601 GGCGTGGACG TGTTGAGCAA CTGA
This corresponds to the amino acid sequence <SEQ ID 1348; ORF
502-1.a>:
TABLE-US-01659 a502-1.pep 1 MMKPHNLFQF LAVCSLTVSV ASAQAGAVDA
LKQFNNDADG ISGSFTQTVQ 51 SKKKTQTAHG TFKILRPGLF KWEYTSPYKQ
TIVGDGQTVW LYDVDLAQVT 101 KSSQDQAIGG SPAAILSNKT ALESSYTLKE
DGSSNGIDYV LATPKRNNAG 151 YQYIRIGFKG GNLAAMQLKD SFGNQTSISF
GGLNTNPQLS RGAFKFTPPK 201 GVDVLSN* a502-1/m502-1 98.6% identity in
207 aa overlap 10 20 30 40 50 60 a502-1.pep
MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGSFTQTVQSKKKTQTAHG
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| m502-1
MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGSFTQTVQSKKKTQTAHG 10 20
30 40 50 60 70 80 90 100 110 120 a502-1.pep
TFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT
|||||||||||||||:||:||||||||||||||||||||||||||||||||||||||||| m502-1
TFKILRPGLFKWEYTKPYRQTIVGDGQTVWLYDVDLAQVTKSSQDQAIGGSPAAILSNKT 70 80
90 100 110 120 130 140 150 160 170 180 a502-1.pep
ALESSYLLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m502-1
ALESSYLLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKGGNLAAMQLKDSFGNQTSISF 130
140 150 160 170 180 190 200 a502-1.pep GGLNTNPQLSRGAFKFTPPKGVDVLSNX
|||||||||||||||||||||||||||| m502-1 GGLNTNPQLSRGAFKFTPPKGVDVLSNX
190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1349>:
TABLE-US-01660 g503.seq 1 atgtccgcgc cgtcggcatc ggtaatcatt
ttgttccatg ccgcttcgat 51 ttcggcatcg agctgttcgg ggaagggcgt
gtccaaaatc cattggcgga 101 tttctttgcc gacgcgtgcc agttcggaaa
cgtcttcgac atccaatttt 151 gccagagcgg cggaaatgcg ttcgttcaga
ccgttgtgtg cgagaaatgc 201 gcggtag
This corresponds to the amino acid sequence <SEQ ID 1350; ORF
503.ng>:
TABLE-US-01661 g503.pep 1 MSAPSASVII LFHAASISAS SCSGKGVSKI
HWRISLPTRA SSETSSTSNF 51 ARAAEMRSFR PLCARNAR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1351>:
TABLE-US-01662 m503.seq 1 atgtccgcac cgccggcatc ggcaaccatt
ttgttccatg ccgcttcgat 51 ttcggcatcg agctgttcgg ggaaaggcgt
atccaaaatc cattggcgga 101 tttctttgcc gacgcgtgcc agttcggcaa
cgtcttcgac atccaatttt 151 gccagtgcgg cggaaatgcg ttcgctcaga
ccgttgtgtg cgaggaatgc 201 gcggtag
This corresponds to the amino acid sequence <SEQ ID 1352; ORF
503>:
TABLE-US-01663 m503.pep 1 MSAPPASATI LFHAASISAS SCSGKGVSKI
HWRISLPTRA SSATSSTSNF 51 ASAAEMRSLR PLCARNAR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 503
shows 91.2% identity over a 68 aa overlap with a predicted ORF (ORF
503.ng) from N. gonorrhoeae:
TABLE-US-01664 m503/g503 10 20 30 40 50 60 m503.pep
MSAPPASATILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSTSNFASAAEMRSLR ||||
||: ||||||||||||||||||||||||||||||||| |||||||| ||||||:| g503
MSAPSASVIILFHAASISASSCSGKGVSKIHWRISLPTRASSETSSISNFARAAEMRSFR 10 20
30 40 50 60 69 m503.pep PLCARNAR |||||||| g503 PLCARNAR
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1353>:
TABLE-US-01665 a503.seq 1 ATGTCCGCGC CGCCGGCATC GGCAACCATT
TTGTTCCATG CCGCTTCGAT 51 TTCGGCATCG AGCTGTTCGG GGAAGGGCGT
GTCCAAAATC CATTGGCGGA 101 TTTCTTTGCC GACGCGTGCC AGTTCGGCAA
CGTCTTCGAC ATCTAATTTT 151 GCCAGTGCGG CGGAAATGCG TTCGCTCAGA
CCGTTGTGTG CGAGGAATGC 201 GCGGTAG
This corresponds to the amino acid sequence <SEQ ID 1354; ORF
503.a>:
TABLE-US-01666 a503.pep 1 MSAPPASATI LFHAASISAS SCSGKGVSKI
HWRISLPTRA SSATSSTSNF 51 ASAAEMRSLR PLCARNAR* m503/a503 100.0%
identity in 68 aa overlap 10 20 30 40 50 60 m503.pep
MSAPPASATILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSTSNFASAAEMRSLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a503
MSAPPASATILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSISNFASAAEMRSLR 10 20
30 40 50 60 69 m503.pep PLCARNARX ||||||||| a503 PLCARNARX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1355>:
TABLE-US-01667 g503-1.seq 1 ATGGCGCGGT CGTTGTACAG GGAGGCGAAA
ACGTGGCGCA TCGCTTTTTT 51 AACGTTATCC AAGCCATTGA TATTCAGGAA
GGTTTCCTGT TGGCCGGCAA 101 ATGATGCGTC GGGCAGGTCT TCGGCGGTTG
CGGAAGAGCG TACGGCAACG 151 GAAATGTCCG CGCCGTCGGC ATCGGTAATC
ATTTTGTTCC ATGCCGCTTC 201 GATTTCGGCA TCGAGCTGTT CGGGGAAGGG
CGTGTCCAAA ATCCATTGGC 251 GGATTTCTTT GCCGACGCGT GCCAGTTCGG
AAACGTCTTC GACATCCAAT 301 TTTGCCAGAG CGGCGGAAAT GCGTTCGTTC
AGACCGTTGT GTGCGAGAAA 351 TGCGCGGTAG
This corresponds to the amino acid sequence <SEQ ID 1356; ORF
214.ng>:
TABLE-US-01668 g503-1.pep 1 MARSLYREAK TWRIAFLTLS KPLIFRKVSC
WPANDASGRS SAVAEERTAT 51 EMSAPSASVI ILFHAASISA SSCSGKGVSK
IHWRISLPTR ASSETSSTSN 101 FARAAEMRSF RPLCARNAR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1357>:
TABLE-US-01669 m503-1.seq 1 ATGGCACGGT CGTTATACAG GGAAGCGAAT
ACATGGTGCA TCGCTTCTTT 51 AACGTTATCC AAGCCGTTGA TGTTCAAGAA
GGTTTCCTGT TGTCCAGCGA 101 ATGATGCGTC CGGCAGGTCT TCGGCAGTTG
CGGAAGAACG TACGGCAACG 151 GAAATGTCCG CACCGCCGGC ATCGGCAACC
ATTTTGTTCC ATGCCGCTTC 201 GATTTCGGCA TCGAGCTGTT CGGGGAAAGG
CGTATCCAAA ATCCATTGGC 251 GGATTTCTTT GCCGACGCGT GCCAGTTCGG
CAACGTCTTC GACATCCAAT 301 TTTGCCAGTG CGGCGGAAAT GCGTTCGCTC
AGACCGTTGT GTGCGAGGAA 351 TGCGCGGTAG
This corresponds to the amino acid sequence <SEQ ID 1358; ORF
503-1>:
TABLE-US-01670 m503-1.pep 1 MARSLYREAN TWCIASLTLS KPLMFKKVSC
CPANDASGRS SAVAEERTAT 51 EMSAPPASAT ILFHAASISA SSCSGKGVSK
IHWRISLPTR ASSATSSTSN 101 FASAAEMRSL RPLCARNAR* g503-1/m503-1 89.9%
identity in 119 aa overlap 10 20 30 40 50 60 g503-1.pep
MARSLYREAKTWRIAFLTLSKPLIFRKVSCWPANDASGRSSAVAEERTATEMSAPSASVI
|||||||||:|| || |||||||:|:|||| |||||||||||||||||||||||| ||: m503-1
MARSLYREANTWCIASLTLSKPLMFKKVSCCPANDASGRSSAVAEERTATEMSAPPASAT 10 20
30 40 50 60 70 80 90 100 110 120 g503-1.pep
ILFHAASISASSCSGKGVSKIHWRISLPTRASSETSSTSNFARAAEMRSFRPLCARNARX
||||||||||||||||||||||||||||||||| |||||||| ||||||:|||||||||| m503-1
ILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSTSNFASAAEMRSLRPLCARNARX 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1359>:
TABLE-US-01671 a503-1.seq 1 ATGGCGCGGT CGTTGTACAG GGAGGCGAAT
ACATGGCGCA TCGCTTCTTT 51 AACGTTTTCC AAGCCGTTGA TATTCAGGAA
GGTTTCCTGT TGGCCGGCAA 101 ATGATGCGTC GGGCAGGTCT TCGGCGGTTG
CGGAAGAGCG TACGGCAACG 151 GAAATGTCCG CGCCGCCGGC ATCGGCAACC
ATTTTGTTCC ATGCCGCTTC 201 GATTTCGGCA TCGAGCTGTT CGGGGAAGGG
CGTGTCCAAA ATCCATTGGC 251 GGATTTCTTT GCCGACGCGT GCCAGTTCGG
CAACGTCTTC GACATCTAAT 301 TTTGCCAGTG CGGCGGAAAT GCGTTCGCTC
AGACCGTTGT GTGCGAGGAA 351 TGCGCGGTAG
This corresponds to the amino acid sequence <SEQ ID 1360; ORF
503-1.a>:
TABLE-US-01672 a503-1.pep 1 MARSLYREAN TWRIASLTFS KPLIFRKVSC
WPANDASGRS SAVAEERTAT 51 EMSAPPASAT ILFHAASISA SSCSGKGVSK
IHWRISLPTR ASSATSSTSN 101 FASAAEMRSL RPLCARNAR* a503-1/m503-1 95.8%
identity in 119 aa overlap 10 20 30 40 50 60 a503-1.pep
MARSLYREANTWRIASLTFSKPLIFRKVSCWPANDASGRSSAVAEERTATEMSAPPASAT
|||||||||||| |||||:||||:|:|||| ||||||||||||||||||||||||||||| m503-1
MARSLYREANTWCIASLTLSKPLMFKKVSCCPANDASGRSSAVAEERTATEMSAPPASAT 10 20
30 40 50 60 70 80 90 100 110 120 a503-1.pep
ILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSTSNFASAAEMRSLRPLCARNARX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m503-1
ILFHAASISASSCSGKGVSKIHWRISLPTRASSATSSTSNFASAAEMRSLRPLCARNARX 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1361>:
TABLE-US-01673 g504.seq 1 atgttggttc aggacttgcc ttttgaagtc
aaactgaaaa aattccatat 51 cgatttttac aatacgggta tgccgcgcga
ttttgccagc gatattgaag 101 taacggacaa ggcaaccggt gagaaactcg
agcgcaccat ccgcgtgaac 151 catcctttga ccttgcacgg catcacgatt
tatcaggcga gttttgccga 201 cggcggttcg gatttgacat tcaaggcgtg
gaatttgagg gatgcttcgc 251 gcgaacctgt cgtgttgaag gcaacctcca
tacaccagtt tccgttggaa 301 atcggcaaac acaaatatcg tcttgagttc
gatcagttca cttctatgaa 351 tgtggaggac atgagcgagg gtgcggaacg
ggaaaaaagc ctgaaatcca 401 ctctgaacga tgtccgcgcc gttactcagg
aaggtaaaaa atacaccaat 451 atcggccctt ccatcgtgta ccgcatccgt
gatgcggcag ggcaggcggt 501 cgaatataaa aactatatgc tgccgatttt
gcaggacaaa gattattttt 551 ggctgaccgg cacgcgcagc ggcttgcagc
agcaataccg ctggctgcgt 601 atccccttgg acaagcagtt gaaagcggac
acctttatgg cattgcgtga 651 gtttttgaaa gatggggaag ggcgcaaacg
tctggttgcc gacgcaacca 701 aagacgcacc tgccgaaatc cgcgaacaat
tcatgctggc tgcggaaaac 751 acgctgaata tctttgcgca aaaaggctat
ttgggattgg acgaatttat 801 tacgtccaat atcccgaaag ggcagcagga
taagatgcag ggctatttct 851 acgaaatgct ttacggcgtg atgaacgctg
ctttggatga aaccatacgc 901 cggtacggct tgcccgaatg gcagcaggat
gaagcgcgga accgtttcct 951 gctgcacagt atggatgcct atacggggct
gacggaatat cccgcgccta 1001 tgctgctcca gcttgacggg ttttccgagg
tgcgttcctc aggtttgcag 1051 atgacccgtt cgccgggtgc gcttttggtc
tatctcggct cggtattgtt 1101 ggttttgggt acagtattta tgttttatgt
gcccaaaaaa cgggcgtggg 1151 tattgttttc aaacdgcaaa atccgttttg
ctatgtcttc ggcccgcagc 1201 gaacgggatt tgcagaagga atttccaaaa
cacgtcgaga gcctgcaacg 1251 gctcggcaag gacttgaatc atgactga
This corresponds to the amino acid sequence <SEQ ID 1362; ORF
504.ng>:
TABLE-US-01674 g504.pep 1 MLVQDLPFEV KLKKFHIDFY NTGMPRDFAS
DIEVTDKATG EKLERTIRVN 51 HPLTLHGITI YQASFADGGS DLTFKAWNLR
DASREPVVLK ATSIHQFPLE 101 IGKHKYRLEF DQFTSMNVED MSEGAEREKS
LKSTLNDVRA VTQEGKKYTN 151 IGPSIVYRIR DAAGQAVEYK NYMLPILQDK
DYFWLTGTRS GLQQQYRWLR 201 IPLDKQLKAD TFMALREFLK DGEGRKRLVA
DATKDAPAEI REQFMLAAEN 251 TLNIFAQKGY LGLDEFITSN IPKGQQDKMQ
GYFYEMLYGV MNAALDETIR 301 RYGLPEWQQD EARNRFLLHS MDAYTGLTEY
PAPMLLQLDG FSEVRSSGLQ 351 MTRSPGALLV YLGSVLLVLG TVFMFYVPKK
RAWVLFSNKI RFAMSSARSE 401 RDLQKEFPKH VESLQRLGKD LNHD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1363>:
TABLE-US-01675 m504.seq.. 1 atattggttc aggacttgcc ttttgaagtc
aaactgaaaa aattccatat 51 cgatttttac aatacgggta tgccgcgtga
tttcgccagc gatattgaag 101 tgacggacaa ggcaaccggt gagaaactcg
agcgcaccat ccgcgtgaac 151 catcctttga ccttgcacgg catcacgatt
tatcaggcga gttttgccga 201 cggcggttcg gatttgacat tcaaggcgtg
gaatttgggt gatgcttcgc 251 gcgagcctgt cgtgttgaag gcaacatcca
tacaccagtt tccgttggaa 301 attggcaaac acaaatatcg tcttgagttc
gatcagttca cttctatgaa 351 tgtggaggac atgagcgagg gcgcggaacg
ggaaaaaagc ctgaaatcca 401 cgctgmmcga tgtccgcgcc gttactcagg
aaggtaaaaa atacaccaat 451 atcggccctt ccattgttta ccgtatccgt
gatgcggcag ggcaggcggt 501 cgaatataaa aactatatgc tgccggtttt
gcaggaacag gattattttt 551 ggattaccgg cacgcgcagc ggcttgcagc
agcaataccg ctggctgcgt 601 atccccttgg acaagcagtt gaaagcggac
acctttatgg cattgcgtga 651 gtttttgaaa gatggggaag ggcgcaaacg
tctggttgcc gacgcaacca 701 aaggcgcacc tgccgaaatc cgcgaacaat
tcatgctggc tgcggaaaac 751 acgctgaaca tctttgcaca aaaaggctat
ttgggattgg acgaatttat 801 tacgtccaat atcccgaaag agcagcagga
taagatgcag ggctatttct 851 acgaaatgct ttacggcgtg atgaacgctg
ctttggatga aaccatacgc 901 cggtacggct tgcccgaatg gcagcaggat
gaagcgcgga atcgtttcct 951 gctgcacagt atggatgcgt acacgggttt
gaccgaatat cccgcgccta 1001 tgctgctgca acttgatggg ttttccgagg
tgcgttcgtc gggtttgcag 1051 atgacccgtt ccccgggtgc gcttttggtc
tatctcggct cggtgctgtt 1101 ggtattgggt acggtattga tgttttatgt
gcgcgaaaaa cgggcgtggg 1151 tattgttttc agacggcaaa atccgttttg
ccatgtcttc ggcccgcagc 1201 gaacgggatt tgcagaagga atttccaaaa
cacgtcgaga gtctgcaacg 1251 gctcggcaag gacttgaatc atga
This corresponds to the amino acid sequence <SEQ ID 1364; ORF
504>:
TABLE-US-01676 m504.pep.. 1 ILVQDLPFEV KLKKFHIDFY NTGMPRDFAS
DIEVTDKATG EKLERTIRVN 51 HPLTLHGITI YQASFADGGS DLTFKAWNLG
DASREPVVLK ATSIHQFPLE 101 IGKHKYRLEF DQFTSMNVED MSEGAEREKS
LKSTLXDVRA VTQEGKKYTN 151 IGPSIVYRIR DAAGQAVEYK NYMLPVLQEQ
DYFWITGTRS GLQQQYRWLR 201 IPLDKQLKAD TFMALREFLK DGEGRKRLVA
DATKGAPAEI REQFMLAAEN 251 TLNIFAQKGY LGLDEFITSN IPKEQQDKMQ
GYFYEMLYGV MNAALDETIR 301 RYGLPEWQQD EARNRFLLHS MDAYTGLTEY
PAPMLLQLDG FSEVRSSGLQ 351 MTRSPGALLV YLGSVLLVLG TVLMFYVREK
RAWVLFSDGK IRFAMSSARS 401 ERDLQKEFPK HVESLQRLGK DLNHD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 504
shows 96.7% identity over a 425 aa overlap with a predicted ORF
(ORF 504.ng) from N. gonorrhoeae:
TABLE-US-01677 m504/g504 10 20 30 40 50 60 m504.pep
ILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITI
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g504
MLVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITI 10 20
30 40 50 60 70 80 90 100 110 120 m504.pep
YQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVED
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| g504
YQASFADGGSDLTFKAWNLRDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVED 70 80
90 100 110 120 130 140 150 160 170 180 m504.pep
MSEGAEREKSLKSTLXDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPVLQEQ
||||||||||||||| |||||||||||||||||||||||||||||||||||||||: ||: : g504
MSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPILQDK 130
140 150 160 170 180 190 200 210 220 230 240 m504.pep
DYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKGAPAEI
||||:||||||||||||||||||||||||||||||||||||||||||||||||| ||||| g504
DYFWLTGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKDAPAEI 190
200 210 220 230 240 250 260 270 280 290 300 m504.pep
REQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIR
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| g504
REQFMLAAENTLNIFAQKGYLGLDEFITSNIPKGQQDKMQGYFYEMLYGVMNAALDETIR 250
260 270 280 290 300 310 320 330 340 350 360 m504.pep
RYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g504
RYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLV 310
320 330 340 350 360 370 380 390 400 410 420 m504.pep
YLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESLQRLGK
||||||||||||:|||| :||||||||: ||||||||||||||||||||||||||||||| g504
YLGSVLLVLGTVFMFYVPKKRAWVLFSN-KIRFAMSSARSERDLQKEFPKHVESLQRLGK 370
380 390 400 410 m504.pep DLNHD ||||| g504 DLNHD 420
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1365>:
TABLE-US-01678 a504.seq 1 ATATTGGTTC AGGACTTGCC TTTTGAAGTC
AAACTGAAAA AATTCCATAT 51 CGATTTTTAC AATACGGGTA TGCCGCGCGA
TTTTGCCAGT GATATTGAAG 101 TAACGGATAA GGCAACCGGT GAGAAACTCG
AGCGCACCAT CCGCGTGAAC 151 CATCCTTTGA CCTTGCACGG CATCACGATT
TATCAGGCGA GTTTTGCCGA 201 CGGCGGTTCG GATTTGACAT TCAAGGCGTG
GAATTTGGGT GATGCTTCGC 251 GCGAGCCTGT CGTGTTGAAG GCAACATCCA
TACACCAGTT TCCGTTGGAA 301 ATTGGCAAAC ACAAATATCG TCTTGAGTTC
GATCAGTTTA CTTCTATGAA 351 TGTGGAGGAC ATGAGCGAGG GCGCGGAACG
GGAAAAAAGC CTGAAATCCA 401 CGCTGAACGA TGTCCGCGCC GTTACTCAGG
AAGGTAAAAA ATACACCAAT 451 ATCGGCCCTT CCATTGTTTA CCGTATCCGT
GATGCGGCAG GGCAGGCGGT 501 CGAATATAAA AACTATATGC TGCCGGTTTT
GCAGGAACAG GATTATTTTT 551 GGATTACCGG CACGCGCAGC GGCTTGCAGC
AGCAATACCG CTGGCTGCGT 601 ATCCCCTTGG ACAAGCAGTT GAAAGCGGAC
ACCTTTATGG CATTGCGTGA 651 GTTTTTGAAA GATGGGGAAG GGCGCAAACG
TCTGGTTGCC GACGCAACCA 701 AAGGCGCACC TGCCGAAATC CGCGAACAAT
TCATGCTGGC TGCGGAAAAC 751 ACGCTGAACA TCTTTGCACA AAAAGGCTAT
TTGGGATTGG ACGAATTTAT 801 TACGTCCAAT ATCCCGAAAG AGCAGCAGGA
TAAGATGCAG GGCTATTTCT 851 ACGAAATGCT TTACGGCGTG ATGAACGCTG
CTTTGGATGA AACCATACGC 901 CGGTACGGCT TGCCCGAATG GCAGCAGGAT
GAAGCGCGGA ATCGTTTCCT 951 GCTGCACAGT ATGGATGCGT ACACGGGTTT
GACCGAATAT CCCGCGCCTA 1001 TGCTGCTGCA ACTTGATGGG TTTTCCGAGG
TGCGTTCGTC GGGTTTGCAG 1051 ATGACCCGTT CCCCGGGTGC GCTTTTGGTC
TATCTCGGCT CGGTGCTGTT 1101 GGTATTGGGT ACGGTATTGA TGTTTTATGT
GCGCGAAAAA CGGGCGTGGG 1151 TATTGTTTTC AGACGGCAAA ATCCGTTTTG
CCATGTCTTC GGCTTGCAGC 1201 GAACGGGATT TGCAGAAGGA ATTTCCAAAA
CACGTCGAGA GTCTGCAACG 1251 GCTCGGCAAG GACTTGAATC ATGACTGA
This corresponds to the amino acid sequence <SEQ ID 1366; ORF
504.a>:
TABLE-US-01679 a504.pep 1 ILVQDLPFEV KLKKFHIDFY NTGMPRDFAS
DIEVTDKATG EKLERTIRVN 51 HPLTLHGITI YQASFADGGS DLTFKAWNLG
DASREPVVLK ATSIHQFPLE 101 IGKHKYRLEF DQFTSMNVED MSEGAEREKS
LKSTLNDVRA VTQEGKKYTN 151 IGPSIVYRIR DAAGQAVEYK NYMLPVLQEQ
DYFWITGTRS GLQQQYRWLR 201 IPLDKQLKAD TFMALREFLK DGEGRKRLVA
DATKGAPAEI REQFMLAAEN 251 TLNIFAQKGY LGLDEFITSN IPKEQQDKMQ
GYFYEMLYGV MNAALDETIR 301 RYGLPEWQQD EARNRFLLHS MDAYTGLTEY
PAPMLLQLDG FSEVRSSGLQ 351 MTRSPGALLV YLGSVLLVLG TVLMFYVREK
RAWVLFSDGK IRFAMSSARS 401 ERDLQKEFPK HVESLQRLGK DLNHD* m504/a504
99.8% identity in 425 aa overlap 10 20 30 40 50 60 m504.pep
ILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
ILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNHPLTLHGITI 10 20
30 40 50 60 70 80 90 100 110 120 m504.pep
YQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVED
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
YQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLEFDQFTSMNVED 70 80
90 100 110 120 130 140 150 160 170 180 m504.pep
MSEGAEREKSLKSTLXDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPVLQEQ
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a504
MSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAVEYKNYMLPVLQEQ 130
140 150 160 170 180 190 200 210 220 230 240 m504.pep
DYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKGAPAEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
DYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGRKRLVADATKGAPAEI 190
200 210 220 230 240 250 260 270 280 290 300 m504.pep
REQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
REQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYFYEMLYGVMNAALDETIR 250
260 270 280 290 300 310 320 330 340 350 360 m504.pep
RYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
RYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGFSEVRSSGLQMTRSPGALLV 310
320 330 340 350 360 370 380 390 400 410 420 m504.pep
YLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESLQRLGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a504
YLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSARSERDLQKEFPKHVESLQRLGK 370
380 390 400 410 420 m504.pep DLNHDX |||||| a504 DLNHDX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1367>:
TABLE-US-01680 g505.seq 1 atgtttcgtt tacaattcag gctgtttccc
cctttgcgaa ccgccatgca 51 catcctgttg accgccctgc tcaaatgcct
ctccctgctg tcgctttcct 101 gtctgcacac gctgggaaac cggctcggac
atctggcgtt ttacctttta 151 aaggaagacc gcgcgcgcat cgtcgccaat
atgcggcagg cgggtttgaa 201 ccccgacacg cagacggtca aagccgtttt
tgcggaaacg gcaaaatgcg 251 gtttggaact tgcccccgcg tttttcaaaa
aaccggaaga catcgaaaca 301 atgttcaaag cggtacacgg ctgggaacac
gtgcagcagg ctttggacaa 351 gggcgaaggg ctgctgttca tcacgccgca
catcggcagc tacgatttgg 401 gcggacgcta catcagccag cagcttccgt
tccacctgac cgccatgtac 451 aagccgccga aaatcaaagc gatagacaaa
atcatgcagg cgggcagggt 501 gcgcggcaaa ggcaaaaccg cgcccaccgg
catacaaggg gtcaaacaaa 551 tcatcaaggc cctgcgcgcg ggcgaggcaa
ccatcatcct gcccgaccac 601 gtcccttctc cgcaggaagg cggcggcgtg
tgggcggatt ttttcggcaa 651 acctgcatac accatgacac tggcggcaaa
attggcacac gtcaaaggcg 701 tgaaaaccct gtttttctgc tgcgaacgcc
tgcccgacgg acaaggcttc 751 gtgttgcaca tccgccccgt ccaaggggaa
ttgaacggca acaaagccca 801 cgatgccgcc gtgttcaacc gcaataccga
atattggata cgccgttttc 851 cgacgcagta tctgtttatg tacaaccgct
ataaaacgcc gtaa
This corresponds to the amino acid sequence <SEQ ID 1368; ORF
505.ng>:
TABLE-US-01681 g505.pep 1 MFRLQFRLFP PLRTAMHILL TALLKCLSLL
SLSCLHTLGN RLGHLAFYLL 51 KEDRARIVAN MRQAGLNPDT QTVKAVFAET
AKCGLELAPA FFKKPEDIET 101 MFKAVHGWEH VQQALDKGEG LLFITPHIGS
YDLGGRYISQ QLPFHLTAMY 151 KPPKIKAIDK IMQAGRVRGK GKTAPTGIQG
VKQIIKALRA GEATIILPDH 201 VPSPQEGGGV WADFFGKPAY TMTLAAKLAH
VKGVKTLFFC CERLPDGQGF 251 VLHIRPVQGE LNGNKAHDAA VFNRNTEYWI
RRFPTQYLFM YNRYKTP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1369>:
TABLE-US-01682 m505.seq (partial) 1 GGCATGTTTC GTTTACAATT
CAGGCTGTTT CCCCCTTTGC GAACCGCCAT 51 GCACATCCTG TTGACCGCCC
TGCTCAAATG CCTCTCCCTG CTGCCGCTTT 101 CCTGTCTGCA CACGCTGGGA
AACCGGCTCG GACATCTGGC GTTTTACCTT 151 TTAAAGGAAG ACCGCGCGCG
CATCGTCGCC AATATGCGGC AGGCGGGTTT 201 GAACCCCGAC CCCAAAACGG
TCAAAGCCGT TTTTGCGGAA ACGGCAAAAG 251 GCGGTTTGGA ACTTGCCCCC
GCGTTTTTCA GAAAACCGGA AGACATAGAA 301 ACAATGTTCA AAGCGGTACA
CGGCTGGGAA CATGTGCAGC AGGCTTTGGA 351 CAAACACGAA GGGCTGCTAT
TCATCACGCC GCACATCGGC AGCTACGATT 401 TGGGCGGACG CTACATCAGC
CAGCAGCTTC CGTTCCCGCT GACCGCCATG 451 TACAAACCGC CGAAAATCAA
AGCGATAGAC AAAATCATGC AGGCGGGCAG 501 GGTTCGCGGC AAAGGAAAAA
CCGCGCCTAC CAGCATACAA GGGGTCAAAC 551 AAATCATCAA AGCCCTGCGT
TCGGGCGAgC AACCATCGTC CTGCCCGACC 601 ACGTCCCCTC CCCTCAAGAA
GGCGGGGAAG GCGTATGGGT GGATTTCTTC 651 GGCAAACCTG CCTATACCAT
GACGCTGGCG GCAArATTGG CACACGTCAA 701 AGGCGTGAAA ACCCTGTTTT
TCTGCTGCGA ACGCCTGCCT GGCGGACAAG 751 GTTTCGATTT GCACATCCGC
CCCGTCCAAG GGGAATTGAA CGGCGACAAA 801 GCCCATGATG CCGCCGTGTT
CAACCGCAAT GCCGAATATT GGATACGCCG 851 TTTTCCGACG CAtATC....
This corresponds to the amino acid sequence <SEQ ID 1370; ORF
505>:
TABLE-US-01683 m505.pep (partial) 1 MFRLQFRLFP PLRTAMHILL
TALLKCLSLL PLSCLHTLGN RLGHLAFYLL 51 KEDRARIVAN MRQAGLNPDP
KTVKAVFAET AKGGLELAPA FFRKPEDIET 101 MFKAVHGWEH VQQALDKHEG
LLFITPHIGS YDLGGRYISQ QLPFPLTAMY 151 KPPKIKAIDK IMQAGRVRGK
GKTAPTSIQG VKQIIKALRS GEATIVLPDH 201 VPSPQEGGEG VWVDFFGKPA
YTMTLAAXLA HVKGVKTLFF CCERLPGGQG 251 FDLHIRPVQG ELNGDKAHDA
AVFNRNAEYW IRRFPTHI...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 505
shows 93.7% identity over a 287 aa overlap with a predicted ORF
(ORF 505.ng) from N. gonorrhoeae:
TABLE-US-01684 m505/g505 10 20 30 40 50 60 m505.pep
MFRLQFRLFPPLRTAMHILLTALLKOLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| g505
MFRLQFRLFPPLRTAMHILLTALLKCLSLLSLSCLHTLGNRLGHLAFYLLKEDRARIVAN 10 20
30 40 50 60 70 80 90 100 110 120 m505.pep
MRQAGLNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG
||||||||| :||||||||||| |||||||||:|||||||||||||||||||||||| || g505
MRQAGLNPDTQTVKAVFAETAKCGLELAPAFFKKPEDIETMFKAVHGWEHVQQALDKGEG 70 80
90 100 110 120 130 140 150 160 170 180 m505.pep
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||:||| g505
LLFITPHIGSYDLGGRYISQQLPFHLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTGIQG 130
140 150 160 170 180 190 200 210 220 230 240 m505.pep
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAXLAHVKGVKILFF
|||||||||:|||||:|||||||||||| |||:|||||||||||||| |||||||||||| g505
VKQIIKALRAGEATIILPDHVPSPQEGG-GVWADFFGKPAYTMTLAAKLAHVKGVKTLFF 190
200 210 220 230 250 260 270 280 289 m505.pep
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTHI |||||| ||||
||||||||||||:|||||||||||:|||||||||: g505
CCERLPDGQGFVLHIRPVQGELNGNKAHDAAVFNRNTEYWIRRFPTQYLFMYNRYKTP 240 250
260 270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1371>:
TABLE-US-01685 a505.seq 1 ATGTTTCGTT TACAATTCAG GCTGTTTCCC
CCTTTGCGAA CCGCCATGCA 51 CATCCTGTTG ACCGCCCTGC TCAAATGCCT
CTCCCTGCTG CCGCTTTCCT 101 GTCTGCACAC GCTGGGAAAC CGGCTCGGAC
ATCTGGCGTT TTACCTTTTA 151 AAGGAAGACC GCGCGCGCAT CGTCGCCAAT
ATGCGTCAGG CAGGCATGAA 201 TCCCGACCCC AAAACGGTCA AAGCCGTTTT
TGCGGAAACG GCAAAAGGCG 251 GTTTGGAACT TGCCCCCGCG TTTTTCAGAA
AACCGGAAGA CATAGAAACA 301 ATGTTCAAAG CGGTACACGG CTGGGAACAT
GTGCAGCAGG CTTTGGACAA 351 ACACGAAGGG CTGCTATTCA TCACGCCGCA
CATCGGCAGC TACGATTTGG 401 GCGGACGCTA CATCAGCCAG CAGCTTCCGT
TCCCGCTGAC CGCCATGTAC 451 AAACCGCCGA AAATCAAAGC GATAGACAAA
ATCATGCAGG CGGGCAGGGT 501 TCGCGGCAAA GGAAAAACCG CGCCTACCAG
CATACAAGGG GTCAAACAAA 551 TCATCAAAGC CCTGCGTTCG GGCGAAGCAA
CCATCGTCCT GCCCGACCAC 601 GTCCCCTCCC CTCAAGAAGG CGGGGAAGGC
GTATGGGTGG ATTTCTTCGG 651 CAAACCTGCC TATACCATGA CGCTGGCGGC
AAAATTGGCA CACGTCAAAG 701 GCGTGAAAAC CCTGTTTTTC TGCTGCGAAC
GCCTGCCTGG CGGACAAGGT 751 TTCGATTTGC ACATCCGCCC CGTCCAAGGG
GAATTGAACG GCGACAAAGC 801 CCATGATGCC GCCGTGTTCA ACCGCAATGC
CGAATATTGG ATACGCCGTT 851 TTCCGACGCA GTATCTGTTT ATGTACAACC
GCTACAAAAT GCCGTAA
This corresponds to the amino acid sequence <SEQ ID 1372; ORF
505.a>:
TABLE-US-01686 a505.pep 1 MFRLQFRLFP PLRTAMHILL TALLKCLSLL
PLSCLHTLGN RLGHLAFYLL 51 KEDRARIVAN MRQAGMNPDP KTVKAVFAET
AKGGLELAPA FFRKPEDIET 101 MFKAVHGWEH VQQALDKHEG LLFITPHIGS
YDLGGRYISQ QLPFPLTAMY 151 KPPKIKAIDK IMQAGRVRGK GKTAPTSIQG
VKQIIKALRS GEATIVLPDH 201 VPSPQEGGEG VWVDFFGKPA YTMTLAAKLA
HVKGVKTLFF CCERLPGGQG 251 FDLHIRPVQG ELNGDKAHDA AVFNRNAEYW
IRRFPTQYLF MYNRYKMP* m505/a505 99.0% identity in 287 aa overlap 10
20 30 40 50 60 m505.pep
MFRLQFRLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
MFRLQFRLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN 10 20
30 40 50 60 70 80 90 100 110 120 m505.pep
MRQAGLNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
MRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG 70 80
90 100 110 120 130 140 150 160 170 180 m505.pep
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG 130
140 150 160 170 180 190 200 210 220 230 240 m505.pep
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAXLAHVKGVKTLFF
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| a505
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAKLAHVKGVKTLFF 190
200 210 220 230 240 250 260 270 280 m505.pep
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTHI
||||||||||||||||||||||||||||||||||||||||||||||: a505
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTQYLFMYNRYKMPX 250 260
270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1373>:
TABLE-US-01687 m505-1.seq 1 ATGTTTCGTT TACAATTCAG GCTGTTTCCC
CCTTTGCGAA CCGCCATGCA 51 CATCCTGTTG ACCGCCCTGC TCAAATGCCT
CTCCCTGCTG CCGCTTTCCT 101 GTCTGCACAC GCTGGGAAAC CGGCTCGGAC
ATCTGGCGTT TTACCTTTTA 151 AAGGAAGACC GCGCGCGCAT CGTCGCCAAT
ATGCGGCAGG CGGGTTTGAA 201 CCCCGACCCC AAAACGGTCA AAGCCGTTTT
TGCGGAAACG GCAAAAGGCG 251 GTTTGGAACT TGCCCCCGCG TTTTTCAGAA
AACCGGAAGA CATAGAAACA 301 ATGTTCAAAG CGGTACACGG CTGGGAACAT
GTGCAGCAGG CTTTGGACAA 351 ACACGAAGGG CTGCTATTCA TCACGCCGCA
CATCGGCAGC TACGATTTGG 401 GCGGACGCTA CATCAGCCAG CAGCTTCCGT
TCCCGCTGAC CGCCATGTAC 451 AAACCGCCGA AAATCAAAGC GATAGACAAA
ATCATGCAGG CGGGCAGGGT 501 TCGCGGCAAA GGAAAAACCG CGCCTACCAG
CATACAAGGG GTCAAACAAA 551 TCATCAAAGC CCTGCGTTCG GGCGAAGCAA
CCATCGTCCT GCCCGACCAC 601 GTCCCCTCCC CTCAAGAAGG CGGGGAAGGC
GTATGGGTGG ATTTCTTCGG 651 CAAACCTGCC TATACCATGA CGCTGGCGGC
AAAATTGGCA CACGTCAAAG 701 GCGTGAAAAC CCTGTTTTTC TGCTGCGAAC
GCCTGCCTGG CGGACAAGGT 751 TTCGATTTGC ACATCCGCCC CGTCCAAGGG
GAATTGAACG GCGACAAAGC 801 CCATGATGCC GCCGTGTTCA ACCGCAATGC
CGAATATTGG ATACGCCGTT 851 TTCCGACGCA GTATCTGTTT ATGTACAACC
GCTACAAAAT GCCGTAA
This corresponds to the amino acid sequence <SEQ ID 1374; ORF
505-1>:
TABLE-US-01688 m505-1.pep 1 MFRLQFRLFP PLRTAMHILL TALLKCLSLL
PLSCLHTLGN RLGHLAFYLL 51 KEDRARIVAN MRQAGLNPDP KTVKAVFAET
AKGGLELAPA FFRKPEDIET 101 MFKAVHGWEH VQQALDKHEG LLFITPHIGS
YDLGGRYISQ QLPFPLTAMY 151 KPPKIKAIDK IMQAGRVRGK GKTAPTSIQG
VKQIIKALRS GEATIVLPDH 201 VPSPQEGGEG VWVDFFGKPA YTMTLAAKLA
HVKGVKTLFF CCERLPGGQG 251 FDLHIRPVQG ELNGDKAHDA AVFNRNAEYW
IRRFPTQYLF MYNRYKMP* m505-1/g505 94.3% identity in 298 aa overlap
10 20 30 40 50 60 m505-1.pep
MFRLQFRLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| g505
MFRLQFRLFPPLRTAMHILLTALLKCLSLLSLSCLHTLGNRLGHLAFYLLKEDRARIVAN 10 20
30 40 50 60 70 80 90 100 110 120 m505-1.pep
MRQAGLNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG
||||||||| :||||||||||| |||||||||:|||||||||||||||||||||||| || g505
MRQAGLNPDTQTVKAVFAETAKCGLELAPAFFKKPEDIETMFKAVHGWEHVQQALDKGEG 70 80
90 100 110 120 130 140 150 160 170 180 m505-1.pep
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||:||| g505
LLFITPHIGSYDLGGRYISQQLPFHLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTGIQG 130
140 150 160 170 180 190 200 210 220 230 240 m505-1.pep
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAKLAHVKGVKTLFF
|||||||||:|||||:|||||||||||| |||:||||||||||||||||||||||||||| g505
VKQIIKALRAGEATIILPDHVPSPQEGG-GVWADFFGKPAYTMTLAAKLAHVKGVKTLFF 190
200 210 220 230 250 260 270 280 290 299 m505-1.pep
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTQYLFMYNRYKMPX ||||||
|||| ||||||||||||:|||||||||||:||||||||||||||||||| || g505
CCERLPDGQGFVLHIRPVQGELNGNKAHDAAVFNRNTEYWIRRFPTQYLFMYNRYKTPX 240 250
260 270 280 290 m505-1/a505 99.7% identity in 298 aa overlap 10 20
30 40 50 60 m505-1.pep
MFRLQFRLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
MFRLQFRLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGHLAFYLLKEDRARIVAN 10 20
30 40 50 60 70 80 90 100 110 120 m505-1.pep
MRQAGLNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
MRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMFKAVHGWEHVQQALDKHEG 70 80
90 100 110 120 130 140 150 160 170 180 m505-1.pep
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
LLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDKIMQAGRVRGKGKTAPTSIQG 130
140 150 160 170 180 190 200 210 220 230 240 m505-1.pep
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAKLAHVKGVKTLFF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
VKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGKPAYTMTLAAKLAHVKGVKTLFF 190
200 210 220 230 240 250 260 270 280 290 299 m505-1.pep
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTQYLFMYNRYKMPX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a505
CCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRNAEYWIRRFPTQYLFMYNRYKMPX 250 260
270 280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1375>:
TABLE-US-01689 g506.seq 1 ATGGCGGTAT TTGATGAAGT CGGGCGCATC
GCCCATGGCT GCGGCGGTGT 51 TGTCAAACAA AGCCTGTTTC TGCGCGTCGT
TCATCAGGTT GAACAAGGCG 101 CGCGGTTGGC TGAAGTAGTC GTCATCGTCT
TGGCGGTAGT CCCAGTGTGC 151 CGCGTCGCCG TTGATTTTCA AAGGCGGTTC
GGCGAAGTCG GGTTGTTGCT 201 GCCATTGGCC GAAGCTGTTG GGTTCGTAGT
GCGGCAGGCT GCCGTAGTTG 251 CCGTCGGCGC GGCCTTGTCC GTCGCGCTGG
TTGCTGTGAA CAGGGCAACG 301 CGGACGATTG ACGGGGATTT GGCGGAAGTT
CACACCCAAG CGGTAACGTT 351 GCGCGTCGGC GTAATTGAAC AAACGGGCTT
GCAACATTTT ATCCGGGCTC 401 GCGCCGATAC CGGGAACGAG GTTGCTCGGT
GCGAAGGCGG ATTGTTCCAC 451 ATCGGCGAAG AAGTTTTCGG GATTGCGGTT
CAACTCGAAT TTGCCGACTT 501 CAATCAGCGG ATAGTCTTTT TTCGGCCAAA
CTTTGGTCAA GTCAAACGGA 551 TGATAAGGCA CTTTTTCGGC ATCGGCTTCA
GGCATGACTT GGATGTACAT 601 CGTCCATTTC GGGAACTCGC CGCGCTCGAT
GGCTTCGTAC AGGTCGCGCT 651 GATGGCTTTC GCGGTCGTCG GCGATGATTT
TTGCAGCTTC TTCGTTGGTC 701 AGGTTTTTAA TCCCTTGCTG GCTGCGGAAA
TGGAATTTCA CCCAAAAACG 751 TTCGCCCGCT TCGTTCCAGA AGCTGTAGGT
ATGCGAACCG AAGCCGTGCA 801 TATGGCGGTA GCTGGCGGGA ATACCGCGGT
CGCTCATCAC GATGGTAACT 851 TGGTGCAGGG CTTCGGGCAG CAGCGTCCAG
AAGTCCCAGT TGTTTGTGGC 901 GGAACGCATA TTGGTGCGCG GATCGCGTTT
GACGGCTTTG TTCAGGTCGG 951 GGAATTTGCG CGGGTCGCGC AGGAAGAACA
CGGGCGTGTT GTTGCCGACC 1001 ACATCCCAGT TGCCTTCTTC GGTATAGAAT
TTCAACGCAA AACCGCGGAT 1051 GTCGCGTTCC GCATCGGCTG CGCCGCGCTC
GCCTGCCACG GTGGTGAAAC 1101 GGGCGAACAT CTCGGTTTTT TTGCCGACTT
CGCTGAAAAT TTTGGCGCGG 1151 GTGTATTTGG TGATGTCGTG TGTTACGGTA
AACGTACCGA ACGCGCCCGA 1201 ACCTTTGGCG TGCATACGGC GTTCGGGGAT
GACTTCGCGC ACGAAGTCGG 1251 CGAGTTTTTC ATTCAGCCAC AAATCTTGCG
TCAGCAGGGG GCCGCGCGGG 1301 CCGGCGGTCA GGCTGTTTTG ATTGTCGGCA
ACGGGCGCGC CGTTGTTCAT 1351 GGTCAGATGG GTTACGGGGC ATTTGGAGGT
AGTCATCGCT CTTGTTCCTT 1401 TTCTCAGGTT GGTCAAATGG GGGGCAAACG
GCTTACAGTA CGATTTGGCG 1451 GAAAGCGTAT TCGTAACCGG TTTCTTGATT
GTAATAAATT TCTTGAATCG 1501 ACATTTTATT TTCCTTTTGC AAAAACTATG
GATGCGATTA TACGCCAAGA 1551 TTTTCGTTAT TAA
This corresponds to the amino acid sequence <SEQ ID 1376; ORF
506.ng>:
TABLE-US-01690 g506.pep 1 MAVFDEVGRI AHGCGGVVKQ SLFLRVVHQV
EQGARLAEVV VIVLAVVPVC 51 RVAVDFQRRF GEVGLLLPLA EAVGFVVRQA
AVVAVGAALS VALVAVNRAT 101 RTIDGDLAEV HTQAVTLRVG VIEQTGLQHF
IRARADTGNE VARCEGGLFH 151 IGEEVFGIAV QLEFAHFNQR IVFFRPNFGQ
VKRMIRHFFG IGFRHDLDVH 201 RPFRELAALD GFVQVALMAF AVVGDDFCSF
FVGQVFNPLL AAEMEFHPKT 251 FARFVPEAVG MRTEAVHMAV AGGNTAVAHH
DGNLVQGFGQ QRPEVPVVCG 301 GTHIGARIAF DGFVQVGEFA RVAQEEHGRV
VADHIPVAFF GIEFQRKTAD 351 VAFRIGCAAL ACHGGETGEH LGFFADFAEN
FGAGVFGDVV CYGKRTERAR 401 TFGVHTAFGD DFAHEVGEFF IQPQILRQQG
AARAGGQAVL IVGNGRAVVH 451 GQMGYGAFGG SHRSCSFSQV GQMGGKRLTV
RFGGKRIRNR FLDCNKFLES 501 TFYFPFAKTM DAIIRQDFRY *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1377>:
TABLE-US-01691 m506.seq 1 ATGGCGGTAT TTGATGAAGT CGGGCGCGTC
GCCCATTGCG GCGGCGGTGT 51 TGCCGAACAA TGCCTGTTTC TGCGCGTCGT
TCATCAGGTT GAACAGGGCG 101 CGCGGTTGGC TGAAATAGTC GTCATCGTCT
TGGCGGTAGT CCCAGTGTGC 151 CGCGTCGCCG TTGATTTTCA AAGGCGGTTC
GGCGAAtCGg GGTTGTTGCT 201 GCCATTGGCC GAAGCTGTyG GGTTCGTAGT
GCGGCAGGCT GCCGyAGTTG 251 CCGTCGGCGC GGCCTTGCCC GTyGCGsTgr
TTgCTGTgAA CAsGGCAACG 301 CGGACGATTG ACGGGAATTT GGCGGAAGTT
TACGCCCAAA CGGTAGCGTT 351 GTGCGTCGGC GTAATTGAAC AAACGCGCTT
GCAGCATTTT ATCTsGGCTG 401 GCGCCGACAC CGGGAACGAG GTTGCTCGGT
GCGAAGGCGG ATTGTTCCAC 451 ATCGGCGAAG AAGTTTTCGG GATTGCGGTT
CTCAAACGGA TGATAAGGTA 501 CTTTTTCCGC GTCTGCTTCA GGCATGACTT
GGATGTACAT CGTCCATTTC 551 GGAAACTCGC CGCGTTCGAT GGCTTCsTAT
AAGTCGCGCT GATGGCTTTC 601 GCGGTCGTCG GCGATGATTT TGGCGGCTTC
TTCGTTGGTC AGGTTTTTAA 651 TGCCTTGTTG GGTGCGGAAA TGGAATTTCA
CCCAAAAACG CTCGCCTGCT 701 TCGTTCCAGA AGCTGTAGGT ATGCGAACCG
AAGCCGTGCA TATGGCGGTA 751 GCCGGCGGGG ATGCCGCGGT CGCTCATCAC
GATGGTAACT TGGTGCAGTG 801 CTTCGGGCAG CAGCGTCCAG AAGTCCCAGT
TGTTTGTGGC AGAGCGCATA 851 TTGGTGCGCG GGTCGCGTTT GACGGCTTTG
TTCAGGTCGG GGAACTTACG 901 CGGGTCGCGC AGGAAGAACA CGGGCGTGTT
GTTGCCGACC ACATCCCAGT 951 TGCCTTCTTC GGTATAAAAT TTCAAGGCAA
AACCGCGGAT GTCGCGTTCT 1001 GCATCGGCTG CGCCGCGTTC GCCTGCCACG
GTGGTGAAAC GGGCGAACAT 1051 CTCGGTTTTT TTGCCGACTT CGCTGAAGAT
TCCTTTGGCG TGCATACGGC 1101 GTTCGGGGAT GACTTCGCGC ACGAAGTCGG
CGAGTTTTTC AGTCATCGCT 1151 CTTGTTCCTT TTCTCAGGTT GGTCAAATGG
GGGTAAACGG CTTACAGTAC 1201 GATTTGGCGG AAAGCGTATT CGTAACCGGT
TTCTTGATTG CAATAAATTT 1251 CTTGAATCGA CATTTTATTT CCCTTTTGTA
AAAACTATGG ATGCGACTAT 1301 ACGCCAAGAT TTTCGCTATT AA
This corresponds to the amino acid sequence <SEQ ID 1378; ORF
506>:
TABLE-US-01692 m506.pep 1 MAVFDEVGRV AHCGGGVAEQ CLFLRVVHQV
EQGARLAEIV VIVLAVVPVC 51 RVAVDFQRRF GESGLLLPLA EAVGFVVRQA
AXVAVGAALP VAXXAVNXAT 101 RTIDGNLAEV YAQTVALCVG VIEQTRLQHF
IXAGADTGNE VARCEGGLFH 151 IGEEVFGIAV QLEFAHFNQR IVFFRPNFGQ
VKRMIRYFFR VCFRHDLDVH 201 RPFRKLAAFD GFXXVALMAF AVVGDDFGGF
FVGQVFNALL GAEMEFHPKT 251 LACFVPEAVG MRTEAVHMAV AGGDAAVAHH
DGNLVQCFGQ QRPEVPVVCG 301 RAHIGARVAF DGFVQVGELT RVAQEEHGRV
VADHIPVAFF GIKFQGKTAD 351 VAFCIGCAAF ACHGGETGEH LGFFADFAED
FGAGVFGDVV RYGKRTERAR 401 TFGVHTAFGD DFAHEVGEFF IQPQILRQQR
AARTGGQAVL IVGNRRAVVH 451 GQMGYRAFGG SHRSCSFSQV GQMGGKRLTV
RFGGKRIRNR FLDCNKFLES 501 TFYFPFVKTM DATIRQDFRY *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 506
shows 89.2% identity over a 520 aa overlap with a predicted ORF
(ORF 506.ng) from N. gonorrhoeae:
TABLE-US-01693 m506/g506 10 20 30 40 50 60 m506.pep
MAVFDEVGRVAHCGGGVAEQCLFLRVVHQVEQGARLAEIVVIVLAVVPVCRVAVDFQRRF
|||||||||:|| |||::| |||||||||||||||||:||||||||||||||||||||| g506
MAVFDEVGRIAHGCGGVVKQSLFLRVVHQVEQGARLAEVVVIVLAVVPVCRVAVDFQRRF 10 20
30 40 50 60 70 80 90 100 110 120 m506.pep
GESGLLLPLAEAVGFVVRQAAXVAVGAALPVAXXAVNXATRTIDGNLAEVYAQTVALCVG ||
|||||||||||||||||| ||||||| || ||| |||||||:||||::|:|:| || g506
GEVGLLLPLAEAVGFVVRQAAVVAVGAALSVALVAVNRATRTIDGDLAEVHTQAVTLRVG 70 80
90 100 110 120 130 140 150 160 170 180 m506.pep
VIEQTRLQHFIXAGADTGNEVARCEGGLFHIGEEVFGIAVQLEFAHFNQRIVFFRPNFGQ |||||
||||| | |||||||||||||||||||||||||||||||||||||||||||||| g506
VIEQTGLQHFIRARADTGNEVARCEGGLFHIGEEVFGIAVQLEFAHFNQRIVFFRPNFGQ 130
140 150 160 170 180 190 200 210 220 230 240 m506.pep
VKRMIRYFFRVCFRHDLDVHRPFRKLAAFDGFXXVALMAFAVVGDDFGGFFVGQVFNALL
||||||:|| : ||||||||||||:|||:||| ||||||||||||| :|||||||| || g506
VKRMIRHFFGIGFRHDLDVHRPFRELAALDGFVQVALMAFAVVGDDFCSFFVGQVFNPLL 190
200 210 220 230 240 250 260 270 280 290 300 m506.pep
GAEMEFHPKTLACFVPEAVGMRTEAVHMAVAGGDAAVAHHDGNLVQCFGQQRPEVPVVCG
:|||||||||:| ||||||||||||||||||||::||||||||||| ||||||||||||| g506
AAEMEFHPKTFARFVPEAVGMRTEAVHMAVAGGNTAVAHHDGNLVQGFGQQRPEVPVVCG 250
260 270 280 290 300 310 320 330 340 350 360 m506.pep
RAHIGARVAFDGFVQVGELTRVAQEEHGRVVADHIPVAFFGIKFQGKTADVAFCIGCAAF
:|||||:||||||||||::||||||||||||||||||||||:|| ||||||| |||||: g506
GTHIGARIAFDGFVQVGEFARVAQEEHGRVVADHIPVAFFGIEFQRKTADVAFRIGCAAL 310
320 330 340 350 360 370 380 390 400 410 420 m506.pep
ACHGGETGEHLGFFADFAEDFGAGVFGDVVRYGKRTERARTFGVHTAFGDDFAHEVGEFF
|||||||||||||||||||:|||||||||| ||||||||||||||||||||||||||||| g506
ACHGGETGEHLGFFADFAENFGAGVFGDVVCYGKRTERARTFGVHTAFGDDFAHEVGEFF 370
380 390 400 410 420 430 440 450 460 470 480 m506.pep
IQPQILRQQRAARTGGQAVLIVGNRRAVVHGQMGYRAFGGSHRSCSFSQVGQMGGKRLTV
||||||||| |||:|||||||||| |||||||||| |||||||||||||||||||||||| g506
IQPQILRQQGAARAGGQAVLIVGNGRAVVHGQMGYGAFGGSHRSCSFSQVGQMGGKRLTV 430
440 450 460 470 480 490 500 510 520 m506.pep
RFGGKRIRNRFLDCNKFLESTFYFPFVKTMDATIRQDFRY
||||||||||||||||||||||||||:||||| ||||||| g506
RFGGKRIRNRFLDCNKFLESTFYFPFAKTMDAIIRQDFRY 490 500 510 520
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1379>:
TABLE-US-01694 a506.seq 1 ATGGCGGTAT TTGATGAAGT CGGGCGCGTC
GCCCATTGCG GCGGCGGTGT 51 TGCCGAACAA TGCCTGTTTC TGCGCGTCGT
TCATCAGGTT GAACAGGGCG 101 CGCGGTTGGC TGAAATAGTC GTCATCGTCT
TGGCGGTAGT CCCAGTGCGC 151 CGCGTCGCCG TTGATTTTCA AAGGCGGTTC
GGCGAAGTCG GGCTGCTGCT 201 GCCATTGGCC GAAGCTGTTG GGTTCGTAGT
GCGGCAGGCT GCCGTAGTTG 251 CCGTCGGCGC GTCCTTGTCC GTCGCGCTGG
TTGCTGTGAA CAGGGCAACG 301 CGGACGGTTG ACAGGGATTT GGCGGAAGTT
CACGCCCAAG CGGTAGCGTT 351 GCGCGTCGGC GTAATTGAAC AAACGCGCCT
GCAACATTTT ATCTGGGCTG 401 GCGCCGACAC CGGGAACGAG GTTGCTCGGT
GCGAAGGCGG ATTGTTCCAC 451 ATCGGCGAAG AAGTTTTCGG GATTGCGGTT
CAACTCGAAT TCGCCCACTT 501 CAATCAGCGG ATAGTCTTTT TTCGGCCAAA
CTTTGGTCAA GTCAAACGGA 551 TGATACGGCA CTTTTTCCGC ATCGGCTTCA
GGCATGACTT GGATGTACAT 601 CGTCCATTTC GGAAACTCGC CGCGCTCGAT
GGCTTCGTAC AGGTCGCGCT 651 GATGGCTTTC ACGGTCGTCG GCGATGATTT
TGGCGGCTTC TTCGTTGGTC 701 AGGTTTTTAA TGCCTTGTTG GGTGCGGAAA
TGGAATTTCA CCCAAAAACG 751 CTCGCCTGCT TCGTTCCAGA AGCTGTAGGT
ATGCGAACCG AAGCCGTGCA 801 TATGGCGGTA GCCGGCGGGG ATGCCGCGGT
CGCTCATCAC GATGGTAACT 851 TGGTGCAGTG CTTCGGGCAG CAGCGTCCAG
AAGTCCCAGT TGTTTGTGGC 901 AGAGCGCATA TTGGTGCGCG GGTCGCGTTT
GACGGCTTTG TTCAGGTCGG 951 GGAACTTACG CGGGTCGCGC AGGAAGAACA
CGGGCGTGTT GTTGCCGACC 1001 ACATCCCAGT TGCCTTCTTC GGTATAGAAC
TTCAACGCAA AACCGCGGAT 1051 GTCGCGTTCT GCATCGGCTG CGCCGCGTTC
GCCTGCCACG GTGGTGAAAC 1101 GGGCGAACAT CTCGGTTTTT TTGCCGACTT
CGCTGAAGAT TTTGGCGCGG 1151 GTGTATTTGG TGATGTCGTG CGTTACGGTA
AACGTACCGA ACGCGCCCGA 1201 ACCTTTGGCG TGCATACGGC GTTCGGGGAT
GACTTCGCGC ACGAAGTCGG 1251 CGAGTTTTTC ATTCAGCCAC AAATCCTGCG
CCAGCAGAGG GCCGCGAGGA 1301 CCGGCGGTCA GGCTGTTTTG ATTGTCGGCA
ACAGGCGCGC CGTTGTTCAT 1351 GGTCAGATGG GTTACAGGGC ATTTGGAGGT
ANTCATCGCT CTTGTTCCTT 1401 TTCTCAGGTT GGTCAAAT.G GGGGTAAACG
GCTTACAGTA CGATTTGGCG 1451 GAAAGCGTAT TCGTAACCGG TTTCTTGATT
GCAATAAATT TCTTGAATCG 1501 ACATTTTATT TCCCTTTTGT AAAAACTATG
GATGCGACTA TACGCCAAGA 1551 TTTTCGCTAT TAA
This corresponds to the amino acid sequence <SEQ ID 1380; ORF
506.a>:
TABLE-US-01695 a506.pep 1 MAVFDEVGRV AHCGGGVAEQ CLFLRVVHQV
EQGARLAEIV VIVLAVVPVR 51 RVAVDFQRRF GEVGLLLPLA EAVGFVVRQA
AVVAVGASLS VALVAVNRAT 101 RTVDRDLAEV HAQAVALRVG VIEQTRLQHF
IWAGADTGNE VARCEGGLFH 151 IGEEVFGIAV QLEFAHFNQR IVFFRPNFGQ
VKRMIRHFFR IGFRHDLDVH 201 RPFRKLAALD GFVQVALMAF TVVGDDFGGF
FVGQVFNALL GAEMEFHPKT 251 LACFVPEAVG MRTEAVHMAV AGGDAAVAHH
DGNLVQCFGQ QRPEVPVVCG 301 RAHIGARVAF DGFVQVGELT RVAQEEHGRV
VADHIPVAFF GIELQRKTAD 351 VAFCIGCAAF ACHGGETGEH LGFFADFAED
FGAGVFGDVV RYGKRTERAR 401 TFGVHTAFGD DFAHEVGEFF IQPQILRQQR
AARTGGQAVL IVGNRRAVVH 451 GQMGYRAFGG XHRSCSFSQV GQXGGKRLTV
RFGGKRIRNR FLDCNKFLES 501 TFYFPFVKTM DATIRQDFRY * m506/a506 94.8%
identity in 520 aa overlap 10 20 30 40 50 60 m506.pep
MAVFDEVGRVAHCGGGVAEQCLFLRVVHQVEQGARLAEIVVIVLAVVPVCRVAVDFQRRF
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a506
MAVFDEVGRVAHCGGGVAEQCLFLRVVHQVEQGARLAEIVVIVLAVVPVRRVAVDFQRRF 10 20
30 40 50 60 70 80 90 100 110 120 m506.pep
GESGLLLPLAEAVGFVVRQAAXVAVGAALPVAXXAVNXATRTIDGNLAEVYAQTVALCVG ||
|||||||||||||||||| |||||:| || ||| ||||:| :||||:||:||| || a506
GEVGLLLPLAEAVGFVVRQAAVVAVGASLSVALVAVNRATRTVDRDLAEVHAQAVALRVG 70 80
90 100 110 120 130 140 150 160 170 180 m506.pep
VIEQTRLQHFIXAGADTGNEVARCEGGLFHIGEEVFGIAVQLEFAHFNQRIVFFRPNFGQ
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a506
VIEQTRLQHFIWAGADTGNEVARCEGGLFHIGEEVFGIAVQLEFAHFNQRIVFFRPNFGQ 130
140 150 160 170 180 190 200 210 220 230 240 m506.pep
VKRMIRYFFRVCFRHDLDVHRPFRKLAAFDGFXXVALMAFAVVGDDFGGFFVGQVFNALL
||||||:|||: ||||||||||||||||:||| ||||||:||||||||||||||||||| a506
VKRMIRHFFRIGFRHDLDVHRPFRKLAALDGFVQVALMAFTVVGDDFGGFFVGQVFNALL 190
200 210 220 230 240 250 260 270 280 290 300 m506.pep
GAEMEFHPKTLACFVPEAVGMRTEAVHMAVAGGDAAVAHHDGNLVQCFGQQRPEVPVVCG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a506
GAEMEFHPKTLACFVPEAVGMRTEAVHMAVAGGDAAVAHHDGNLVQCFGQQRPEVPVVCG 250
260 270 280 290 300 310 320 330 340 350 360 m506.pep
RAHIGARVAFDGFVQVGELTRVAQEEHGRVVADHIPVAFFGIKFQGKTADVAFCIGCAAF
||||||||||||||||||||||||||||||||||||||||||::| |||||||||||||| a506
RAHIGARVAFDGFVQVGELTRVAQEEHGRVVADHIPVAFFGIELQRKTADVAFCIGCAAF 310
320 330 340 350 360 370 380 390 400 410 420 m506.pep
ACHGGETGEHLGFFADFAEDFGAGVFGDVVRYGKRTERARTFGVHTAFGDDFAHEVGEFF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a506
ACHGGETGEHLGFFADFAEDFGAGVFGDVVRYGKRTERARTFGVHTAFGDDFAHEVGEFF 370
380 390 400 410 420 430 440 450 460 470 480 m506.pep
IQPQILRQQRAARTGGQAVLIVGNRRAVVHGQMGYRAFGGSHRSCSFSQVGQMGGKRLTV
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| a506
IQPQILRQQRAARTGGQAVLIVGNRRAVVHGQMGYRAFGGXHRSCSFSQVGQXGGKRLTV 430
440 450 460 470 480 490 500 510 520 m506.pep
RFGGKRIRNRFLDCNKFLESTFYFPFVKTMDATIRQDFRYX
||||||||||||||||||||||||||||||||||||||||| a506
RFGGKRIRNRFLDCNKFLESTFYFPFVKTMDATIRQDFRYX 490 500 510 520
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1381>:
TABLE-US-01696 g507.seq 1 ATGCTCTTGC CGGCTTTGCA ACAAGGCGGC
GGCTTCCTGA GCGGCGGCGG 51 TTTCGGCCTC GTCGGGCAGG TTCAGGGCTT
GGTTTTCCTG CTTCAGACGG 101 CCTTTGCGCT CTTCGTGCTT GGCAACGGTT
TGTTCGGCAT GGGCAAGCTG 151 CTGCTGCTTC AACGCCAGTT CGCGGCGGAT
GCGGTTTGCC TCGTCCTGCT 201 GGGTTTGGAA GGCAGCGTTG AGCGTGGCTT
GGACTTCTTC CAATTCGGGC 251 AGACGCTCTT CGTGTTCGGC AACCTGCATC
GCCCATTCCG CCAATTCGGT 301 TTGCTTTTCT TCGACCTGCA ACTCGTTTTC
CTCAAGCTGC ACGCGGATTT 351 GCTGCTGCTC CTGCCGGATG CGTTGCAACT
GCGCCTGCGC TGCCTGCTTG 401 TCGCGTTCGA TGCGTTGGTG CAGGTTTTGC
CGGTGGCGGA TTTGTTCTTC 451 CAAACGGGCA ATCTGCTCGC GCAACACGCC
GCGTTTGTTG CTCAATTCGT 501 GTACTGCCTG CTGCTGCGAC TGTTCGGCAG
TCTGCAAGGC GTGTACTTCG 551 TTATTTAA
This corresponds to the amino acid sequence <SEQ ID 1382; ORF
507.ng>:
TABLE-US-01697 g507.pep 1 MLLPALQQGG GFLSGGGFGL VGQVQGLVFL
LQTAFALFVL GNGLFGMGKL 51 LLLQRQFAAD AVCLVLLGLE GSVERGLDFF
QFGQTLFVFG NLHRPFRQFG 101 LLFFDLQLVF LKLHADLLLL LPDALQLRLR
CLLVAFDALV QVLPVADLFF 151 QTGNLLAQHA AFVACFVYCL LLRLFGSLQG
VYFVI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1383>:
TABLE-US-01698 m507.seq 1 ATGCTCTTGC TGACTTTGCA ACAAGGCGGC
TGCTTCCTGC GCGGCGGCGG 51 TTTCGGCTTC GTCGGGCAGG TTTAAGGCTT
GGTTTTCCTG TTTCAGACGA 101 CCTTTGCGCT CTTCGTGCTT GGCAATCGTT
TGTTCGGCAT GGGCAAGCTG 151 CTGCTGCTTC AACGCCAGTT CGCGGCGGAT
GCGGTTTGCC TCGTCCTGCT 201 GGGTTTGGAA GGCGGCGTTG AGCGTGGCTT
GGGCTTCTTC CAATTCGGGC 251 AGACGCTCCT CGTGTTCGGC AACCTGCATC
GCCCATTCCG CCAGCTCGGT 301 TTGTTTTTCT TCGACCTGCA ACTCGTTTTC
TTCAAGCTGC ACGCGGATTT 351 GCTGCTGCTC TTGATGAATG CGTTGTAACT
GCGCCTGCGC TGCCTGCTTG 401 TCGCGTTCGA TGCGTTGGTG CAGGTTTTGC
TGATGGCGGA TTTGTTCTTC 451 CAAACGGGCA ATCTGCTCGC GCAACACGCC
GCGCTTGTTG CTCAATTCAT 501 GCACTGCCTG CTGCTGCGAC TGTTCGGCAG
TCTGCAAGGC GTGTACTTCG 551 TCGTTTAA
This corresponds to the amino acid sequence <SEQ ID 1384; ORF
507>:
TABLE-US-01699 m507.pep 1 MLLLTLQQGG CFLRGGGFGF VGQVXGLVFL
FQTTFALFVL GNRLFGMGKL 51 LLLQRQFAAD AVCLVLLGLE GGVERGLGFF
QFGQTLLVFG NLHRPFRQLG 101 LFFFDLQLVF FKLHADLLLL LMNALXLRLR
CLLVAFDALV QVLLMADLFF 151 QTGNLLAQHA ALVAQFMHCL LLRLFGSLQG
VYFVV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 507
shows 87.0% identity over a 185 aa overlap with a predicted ORF
(ORF 507.ng) from N. gonorrhoeae:
TABLE-US-01700 m507/g507 10 20 30 40 50 60 m507.pep
MLLLTLQQGGCFLRGGGFGFVGQVXGLVFLFQTTFALFVLGNRLFGMGKLLLLQRQFAAD |||
:||||| || |||||:|||| |||||:||:|||||||| ||||||||||||||||| g507
MLLPALQQGGGFLSGGGFGLVGQVQGLVFLLQTAFALFVLGNGLFGMGKLLLLQRQFAAD 10 20
30 40 50 60 70 80 90 100 110 120 m507.pep
AVCLVLLGLEGGVERGLGFFQFGQTLLVFGNLHRPFRQLGLFFFDLQLVFFKLHADLLLL
|||||||||||:||||| ||||||||:|||||||||||:||:||||||||:||||||||| g507
AVCLVLLGLEGSVERGLDFFQFGQTLFVFGNLHRPFRQFGLLFFDLQLVFLKLHADLLLL 70 80
90 100 110 120 130 140 150 160 170 180 m507.pep
LMNALXLRLRCLLVAFDALVQVLLMADLFFQTGNLLAQHAALVAQFMHCLLLRLFGSLQG | :||
||||||||||||||||| :||||||||||||||||:||||::|||||||||||| g507
LPDALQLRLRCLLVAFDALVQVLPVADLFFQTGNLLAQHAAFVAQFVYCLLLRLFGSLQG 130
140 150 160 170 180 m507.pep VYFVV ||||: g507 VYFVI
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1385>:
TABLE-US-01701 a507.seq 1 ATGCTCTTGC TGGCTTTGCA ACAAGGCGGC
AGCTTCCTGC GCGGCGGCGG 51 TTTCGGCTTC GTCAGGCAGA TTCAGGGCTT
GGTTTTCCTG TTTCAGACGA 101 CCTTTGCGCT CTTCGTGCTT GGCAACGGTT
TGTTCGGCAT GGGCAAGCTG 151 CTGCTGCTTC AACGCCAGTT CGCGGCGGAT
GCGGTTTGCC TCGTCCTGCT 201 GGGTTTGGAA GGCGGCATTG AGTGTGGCTT
GGGTTTCTTC CAATTCGGGC 251 AGACGCTCTT CGTGTTCGGC AACCTGCATC
GCCCATTCCG CCAATTCGGT 301 TTGCTTTTCT TCCGCCTGCA ACTCGTTTTC
TTCAAGCTGC ACGCGGATTT 351 GCTGCTGCTC CTGATGGATG CGCTGCATCT
GCGCCTGCGC CGCCTGCTTG 401 TCGCGTTCGA TGCGTTGGTG CAGGTTTTGC
TGATGGCGGA TTTGTTCTTC 451 CAAACGGGCA ATCTGTTCGC GCAACACGCC
GCGTTTGTTG CCCAATTCGT 501 GCACCGCCTG CTGCTGCGAC TGTTCGGCAG
TCTGCAAGGC GTGTACTTCG 551 TCGTTTAA
This corresponds to the amino acid sequence <SEQ ID 1386; ORF
507.a>:
TABLE-US-01702 a507.pep 1 MLLLALQQGG SFLRGGGFGF VRQIQGLVFL
FQTTFALFVL GNGLFGMGKL 51 LLLQRQFAAD AVCLVLLGLE GGIECGLGFF
QFGQTLFVFG NLHRPFRQFG 101 LLFFRLQLVF FKLHADLLLL LMDALHLRLR
RLLVAFDALV QVLLMADLFF 151 QTGNLFAQHA AFVAQFVHRL LLRLFGSLQG VYFVV*
m507/a507 89.7% identity in 185 aa overlap 10 20 30 40 50 60
m507.pep
MLLLTLQQGGCFLRGGGFGFVGQVXGLVFLFQTTFALFVLGNRLFGMGKLLLLQRQFAAD
||||:||||| |||||||||| |: ||||||||||||||||| ||||||||||||||||| a507
MLLLALQQGGSFLRGGGFGFVRQIQGLVFLFQTTFALFVLGNGLFGMGKLLLLQRQFAAD 10 20
30 40 50 60 70 80 90 100 110 120 m507.pep
AVCLVLLGLEGGVERGLGFFQFGQTLLVFGNLHRPFRQLGLFFFDLQLVFFKLHADLLLL
||||||||||||:| |||||||||||:|||||||||||:||:|| ||||||||||||||| a507
AVCLVLLGLEGGIECGLGFFQFGQTLFVFGNLHRPFRQFGLLFFRLQLVFFKLHADLLLL 70 80
90 100 110 120 130 140 150 160 170 180 m507.pep
LMNALXLRLRCLLVAFDALVQVLLMADLFFQTGNLLAQHAALVAQFMHCLLLRLFGSLQG ||:||
|||| ||||||||||||||||||||||||:|||||:||||:| ||||||||||| a507
LMDALHLRLRRLLVAFDALVQVLLMADLFFQTGNLFAQHAAFVAQFVHRLLLRLFGSLQG 130
140 150 160 170 180 m507.pep VYFVVX |||||| a507 VYFVVX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1387>:
TABLE-US-01703 g508.seq 1 ATGGTAGCGT TTGGCGTTGA TCAGGGCCTC
CTGCTGCTGC AACAGGGCGG 51 TTTGGGTGGC GGCCTGAAGC TGCGGCAGCT
TGGTTTGCAG GGTTTGTACG 101 CGGGCGTATT GCTCCCTGCC CTGTTCCTGA
ATCTGCGCGA GTTTTTCCTG 151 CACGGCGATG TATTCTTCGT CCAGCGTGTG
TACGGTTTCG GTCAACTCGT 201 CGAGCTTGAT GTGCTGCTCG TCGTTTTGGA
ACTCGGTTTC ATAGGCGAGG 251 GCAAGCTCTT GCCGGCGTTC CTGCCAGTCC
AGGGTTTGCT GTTCGAGCCG 301 GGCGATTTGC TGCCGGTAGT TTTGTTTTTG
CGGGTTGAGT TTGTGGACGG 351 CGACTTCGGC AAGCCCGTAT TGGCGGTTGG
CTTCCAACAG GGCAAGCTGC 401 GCCTGTTTCA GACGGCCTTG CTGCTCTTGG
CGGCTGTGCG CGGTGGTTTG 451 CTGCTGGTGT TCGAGTTCGG CGGCGGCTTC
CTGCAAAGTA GCGATGTCGT 501 CTGA
This corresponds to the amino acid sequence <SEQ ID 1388; ORF
508.ng>:
TABLE-US-01704 g508.pep 1 MVAFGVDQGL LLLQQGGLGG GLKLRQLGLQ
GLYAGVLLPA LFLNLREFFL 51 HGDVFFVQRV YGFGQLVELD VLLVVLELGF
IGEGKLLPAF LPVQGLLFEP 101 GDLLPVVLFL RVEFVDGDFG KPVLAVGFQQ
GKLRLFQTAL LLLAAVRGGL 151 LLVFEFGGGF LQSSDVV
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1389>:
TABLE-US-01705 m508.seq 1 ATGGTAGCGT TTGGCGTTGA TCAGGGCTTC
CTGCTGCTGC AACAAGGCGG 51 TTTGGGTGGC GGCCTGAAGC TGCGGCAGCT
TGGTTTGCAG GGTTTGCACT 101 TTAGCGTATT GCTCCCTGCC CTGTTCCTGA
ATCTGCGCGA GTTTCTCTTG 151 CACAACAATA TATTCTTCGT CCAAGGTCTG
TACGGCTTCG CTTAATTCTT 201 CAAGCTTGAT GTGCTGCTCG TCGTTTTGGA
ACTCGGTTTC ATAGGCGAGG 251 GCAAGCTCTT GCTGGCGTTC CTGCCAGTCG
AGGGTTTGCT GTTCAAGCTG 301 GGCGATTTGC TGCCGGTAGT TTTGTTTTTG
CTGGTTGAGT TTGTGGACGG 351 CGACTTCGGC AAGCCCGTAT TGGCGGTTGG
CTTCCAACAG GGCAAGCTGC 401 GCCTGTTTCA GACGGCCTTG CTGCTCTTGG
CGGCTGTGCG CGGTGGTTTG 451 CTGCTGGTGT TCGAGTTCGG CGGCGGCTTC
CTGCAAGGTA ACGATGTCGT 501 CTGA
This corresponds to the amino acid sequence <SEQ ID 1390; ORF
508.ng>:
TABLE-US-01706 m508.pep 1 MVAFGVDQGF LLLQQGGLGG GLKLRQLGLQ
GLHFSVLLPA LFLNLREFLL 51 HNNIFFVQGL YGFAXFFKLD VLLVVLELGF
IGEGKLLLAF LPVEGLLFKL 101 GDLLPVVLFL LVEFVDGDFG KPVLAVGFQQ
GKLRLFQTAL LLLAAVRGGL 151 LLVFEFGGGF LQGNDVV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 508
shows 86.8% identity over a 167 aa overlap with a predicted ORF
(ORF 508.ng) from N. gonorrhoeae:
TABLE-US-01707 m508/g508 10 20 30 40 50 60 m508.pep
MVAFGVDQGFLLLQQGGLGGGLKLRQLGLQGLHFSVLLPALFLNLREFLLHNNIFFVQGL
|||||||||:||||||||||||||||||||||: :|||||||||||||:||:::|||| : g508
MVAFGVDQGLLLLQQGGLGGGLKLRQLGLQGLYAGVLLPALFLNLREFFLHGDVFFVQRV 10 20
30 40 50 60 70 80 90 100 110 120 m508.pep
YGFAXFFKLDVLLVVLELGFIGEGKLLLAFLPVEGLLFKLGDLLPVVLFLLVEFVDGDFG |||: :
:||||||||||||||||||| |||||:||||: |||||||||| ||||||||| g508
YGFGQLVELDVLLVVLELGFIGEGKLLPAFLPVQGLLFEPGDLLPVVLFLRVEFVDGDFG 70 80
90 100 110 120 130 140 150 160 m508.pep
KPVLAVGFQQGKLRLFQTALLLLAAVRGGLLLVFEFGGGFLQGNDVV
||||||||||||||||||||||||||||||||||||||||||::||| g508
KPVLAVGFQQGKLRLFQTALLLLAAVRGGLLLVFEFGGGFLQSSDVV 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1391>:
TABLE-US-01708 a508.seq 1 ATGGTAGCGT TTGGCGTTGA TCAGGGCTTC
CTGCTGCTGC AACAGGGCGG 51 TTTGGGTGGC GGCCTGAAGC TGCGGCAGCT
TGGTTTGCAG GGTTTGTACG 101 CGGGCGTATT GTTCCCTACC CTGCTCCTGA
ATCTGCGCGA GTTTCTCCTG 151 TACGACAATA TATTCTTCGT CCAAACTCTG
TACGGCTTCG CTCAACTCTT 201 CGAGCTTGAT GTGCTGCTCG TCGTTTTGGA
ACTCGGTTTC ATAGGCGAGG 251 GCAAGCTCTT GCTGGCGTTC CTGCCAATCG
AAGGTTTGTT GTTCAAGCTG 301 GGCAATTTGC TGTTGGTAGT TTTGTTTTTG
CTGGTTGAGC TTGTGGACGG 351 CGACTTCGGC AAGCCCGTAT TGGCGGTTGG
CTTCCAACAG GGCAAGCTGC 401 GCCTGTTTCA GACGACCTTG CTGCTCTTGG
CGGCTGTGCG CGGCGGTTTG 451 CTGCTGGTGT TCGAGTTCGG CGGCGGCTTC
CTGCAAAATG GCGATGTCGT 501 CTGA
This corresponds to the amino acid sequence <SEQ ID 1392; ORF
508.a>:
TABLE-US-01709 a508.pep 1 MVAFGVDQGF LLLQQGGLGG GLKLRQLGLQ
GLYAGVLFPT LLLNLREFLL 51 YDNIFFVQTL YGFAQLFELD VLLVVLELGF
IGEGKLLLAF LPIEGLLFKL 101 GNLLLVVLFL LVELVDGDFG KPVLAVGFQQ
GKLRLFQTTL LLLAAVRGGL 151 LLVFEFGGGF LQNGDVV* m508/a508 88.6%
identity in 167 aa overlap 10 20 30 40 50 60 m508.pep
MVAFGVDQGFLLLQQGGLGGGLKLRQLGLQGLHFSVLLPALFLNLREFLLHNNIFFVQGL
||||||||||||||||||||||||||||||||: :||:|:|:||||||||::|||||| | a508
MVAFGVDQGFLLLQQGGLGGGLKLRQLGLQGLYAGVLFPTLLLNLREFLLYDNIFFVQTL 10 20
30 40 50 60 70 80 90 100 110 120 m508.pep
YGFAXFFKLDVLLVVLELGFIGEGKLLLAFLPVEGLLFKLGDLLPVVLFLLVEFVDGDFG ||||
:|:||||||||||||||||||||||||:||||||||:|| ||||||||:|||||| a508
YGFAQLFELDVLLVVLELGFIGEGKLLLAFLPIEGLLFKLGNLLLVVLFLLVELVDGDFG 70 80
90 100 110 120 130 140 150 160 m508.pep
KPVLAVGFQQGKLRLFQTALLLLAAVRGGLLLVFEFGGGFLQGNDVVX
||||||||||||||||||:|||||||||||||||||||||||::|||| a508
KPVLAVGFQQGKLRLFQTTLLLLAAVRGGLLLVFEFGGGFLQNGDVVX 130 140 150
160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1393>:
TABLE-US-01710 g509.seq 1 atggtcgctg tatgtgatga acgggctgta
cagcggacgt tggtggccca 51 attcgcgcaa caaggcggct tgtttttgct
cttcgttcag gctgttgtag 101 tcttccaagc ctgcgtgttg gaaaagctcg
gcaaccacat cggcgtgttt 151 gcctgcgtgt tggcgcaggt cgagcggcat
catgtggaag ccgaacacgg 201 acacggaacg gatgaggtct gccaaacggc
cttcggcaag caggcggctg 251 ccgttgtcga taagggaacg ttgcaatttt
ttcaaatcat cgagaaattt 301 ttgggccgaa gcataaggct cgagaaagcc
gaatttgcag cccatgccca 351 aaccgagcga gcgcgctttg cccatagcgc
gcgccataat gtaggcaatg 401 gcgcggcggt aaggttcttc ggtgcgggcg
atttcttcgt caggcgagag 451 ggctgccagt gccattacgt cgtcgttgac
tttgacgcgg cggatggaaa 501 gcggcagttc gcggtaaagt ttgtcgagtt
cgctgcggta aaaacggaac 551 acggcatcgg cgtggcggcg gaaggcaaag
cgcagggttt cgccagaaac 601 aaacggattg ccgtcgcggt cgccgccgat
ccagccgccg attttaagga 651 tattcggaac gcggacatcg ggataggccg
tctgaaagtc gtgttccatc 701 ttgcggtaga gtttgggcag ggcttcaaaa
aagctcatcg ggaagatgga 751 cacgccgttg ttgatttcgt cgttgacgct
gagtttgtgg cggcgcgttt 801 cgctggtctg ccacaagccc agaagcacgg
tgtcgatttc gcggcgcagc 851 cgtgccagcg cgtcggcatt ggtgcagcgt
tcgcgttgcg gcagcagcgc 901 gcggatgcgg cggttgaaat tcaaaacggt
ttggcgttgc acttcggtcg 951 ggtgcgcggt caaaacggcg gtaacggacg
tattgtccaa ctgccgctgc 1001 accgatttgc cgtcggcttt ccccgctttg
agcctgcgga cggtttccgt 1051 caggctgcct tctgctgcgt tgtggccggc
atcttcgtgg atttggcggc 1101 ggcgttcgtg gtgcacgtct tcggcgatat
tcagaatctg ggcgaacagc 1151 ccgcaggcaa gcgtcagatc gtaggtctgc
cgttcgtcca attgcggcaa 1201 tactttttca atcaatgccg cgctgtcgtc
ggaagtggac aagagtttga 1251 ccgtttcgac aaccaacggc gaggcttctt
cgtgcaggag gttgaacagg 1301 gactgtttca aaaattccgc gtccgccgcc
aaagccgcgt ccttcggatt 1351 gttcaggata tgcagttgca tgattttcct
ctcattgccg taaatactgt 1401 aaatgtacct caaatgccgc atccgtgcca
aaccgttcac actttaacca 1451 ctcatgtccc gaaatgccgt ctgaagttga
acgccgcccg acggcggcgt 1501 tacaatcgcc cgcaactgtt tttttccgaa
catcatcatg accgcgaccg 1551 aacacgacaa cgacgacgca ctcctgctgc
ggtacagccg ccacatcctc 1601 ttggacgaaa tcggcatcga agggcagcag
aagctttccg ccgcgcatat 1651 tttggtcgtc ggctgcggcg gattgggcgc
cgccgcccct gccctatctc 1701 gccgcctcgg gggtcggcac gctga
This corresponds to the amino acid sequence <SEQ ID 1394; ORF
509.ng>:
TABLE-US-01711 g509.pep 1 MVAVCDERAV QRTLVAQFAQ QGGLFLLFVQ
AVVVFQACVL EKLGNHIGVF 51 ACVLAQVERH HVEAEHGHGT DEVCQTAFGK
QAAAVVDKGT LQFFQIIEKF 101 LGRSIRLEKA EFAAHAQTER ARFAHSARHN
VGNGAAVRFF GAGDFFVRRE 151 GCQCHYVVVD FDAADGKRQF AVKFVEFAAV
KTEHGIGVAA EGKAQGFARN 201 KRIAVAVAAD PAADFKDIRN ADIGIGRLKV
VFHLAVEFGQ GFKKAHREDG 251 HAVVDFVVDA EFVAARFAGL PQAQKHGVDF
AAQPCQRVGI GAAFALRQQR 301 ADAAVEIQNG LALHFGRVRG QNGGNGRIVQ
LPLHRFAVGF PRFEPADGFR 351 QAAFCCVVAG IFVDLAAAFV VHVFGDIQNL
GEQPAGKRQI VGLPFVQLRQ 401 YFFNQCRAVV GSGQEFDRFD NQRRGFFVQE
VEQGLFQKFR VRRQSRVLRI 451 VQDMQLHDFP LIAVNTVNVP QMPHPCQTVH
TLTTHVPKCR LKLNAARRRR 501 YNRPQLFFSE HHHDRDRTRQ RRRTPAAVQP
PHPLGRNRHR RAAEAFRRAY 551 FGRRLRRIGR RRPCPISPPR GSAR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1395>:
TABLE-US-01712 m509.seq 1 ATGGTCGCTG TATGTGATAA ACGGGCTGTA
CAGAGGACGT TGATGGCTCA 51 ATTCGCGCAA CAGGGCGGTT TGTTTTTGCT
CTTCGTTCAG GCGGTTGTAG 101 TCTTCCAAGC CTGCGTGTTG GAAAAGCTCG
GCAACCACAT CGGCGTGTTT 151 GCCTGCGTGT TGGCGCAAGT CGAGCGGCAT
CATGTGAAAG CCGAACACGG 201 ATACGGAACG GATGAGGTCT GCCAAACGGC
CTTCGGCAAG CAGACGGCTG 251 CCGTTGTCGA TAAGGGAACG TTGCAATTTT
TTCAAATCAT CCAGAAACTC 301 TTGTGCCGAA GCATAAGGCT CGAGAAAGCC
GAATTTGCAG CCCATACCCA 351 AACCGAGCGC GCGCGCTTTG CCCATAGCGC
GCGCCATAAT GTAGGCGATG 401 GCGCGGCGGT AGGGTTCTTC GGCGCGGGCG
ATTTCTTCGT CGGGCGATTT 451 GTCGGACAAC GCCGTTACAT CGCCGTTGAC
TTTGACGCGG CGGATGGAGA 501 GCGGCAGTTC GCGGTAGAGT TTGTCGAGTT
CGCCGCGATA GAAGCGGAAC 551 ACGGCATCGG CGTGGCGGCG GAAGGCAAAG
CGCAGGGTTT CGGCAGAAAC 601 AAACGGATTG CCGTCGCGGT CGCCGCCGAT
CCAGCCGCCG ATTTTGAGGA 651 TGTCCGGAAC GCGGACGCCG GGATAGGCCG
TCTGAAAGTC GTGTTCCATC 701 TTGCGGTAGA GCTTGGGCAG GGCTTCGAAA
AAGCTCATCG GGAAGATGGA 751 CACGCCGTTG TTGATTTCGT CGTTGACGCT
GAGTTTGTGG CGGCGCGTTT 801 CGCTGGTCTG CCACAAGCCC AGCAGGATAG
TGTCGATTtC GCgGCGCAGC 851 CGTGCCAGCG CGTCGGCATT GGTGCAGCGT
TCgCGTTGCG GCAACAGTGC 901 GCGGATGCGG CGGTTGAAGC TTAAGACGGT
TTGGCGTTGC ACTTCGGTCG 951 GGTGCGCGGT CAAAACGGCG GTAACGGACG
TATTGTCCAA CTGCCGCTGC 1001 ACCGATTTGC CGTCGGCTTT CCCCGCTTTG
AGCCTGCGGA CGGTTTCCGT 1051 CAGGCTGCCT TCCGCGCCGC CGCGTCCGGC
TTCTTCGTGG ATTTGGCGGC 1101 GGCGTTCGTG GTGCACGTCT TCGGCGATGT
TCAAAATCTG GGCGAACAGG 1151 CCGCAGGCCA AGGTTAAATC GTGGGTTTGT
TGTTCGTCCA ATTGCGGCAA 1201 TACTTTTTCA ATCAATGCCG CGCTGTCGTC
GGAAGTGGAC AAGAGTTTGA 1251 CTGTTTCGAC AACCAACGGC GAGGCTTCTT
CGTGCAGGAG GTTGAACAGG 1301 GATTGTTTCA GAAATTCCGC GTCCGCCGCC
AAAGCCGCGT CCTTTGGATT 1351 GTTCAGAATA TGCAGTTGCA TGATTTTTCT
CTCTCGTCTG CCGTAAATAT 1401 TGTAAATGTA CCCCAAATGC CGCATCCGTG
CCAAACCGTT CACACTTTAA 1451 CCGCCCGTGT CCCGAAATGC CGTCTGAAGT
TGAACGCCGC CCGACGGCAG 1501 CGTTACAATC GCCCGCAACT GTTTTtTTCC
GAACATCATC ATGACCACGA 1551 CCGAACACGA CAACGACGAT GCATTCCTGC
TGCGGTACAG CCGCCACATC 1601 CTCTTGGACG AAATCGGCAT CGAAGGGCAG
CAGAAACTTT CCGCCGCGCA 1651 TATTTTGGTC GTCGGCTGCG GCGGTTTGGG
TGCCGCCGCA CT.GCCCTAC 1701 CTTGCCGCTT CGGGTGTCGG CACGCTGA
This corresponds to the amino acid sequence <SEQ ID 1396; ORF
509>:
TABLE-US-01713 m509.pep 1 MVAVCDKRAV QRTLMAQFAQ QGGLFLLFVQ
AVVVFQACVL EKLGNHIGVF 51 ACVLAQVERH HVKAEHGYGT DEVCQTAFGK
QTAAVVDKGT LQFFQIIQKL 101 LCRSIRLEKA EFAAHTQTER ARFAHSARHN
VGDGAAVGFF GAGDFFVGRF 151 VGQRRYIAVD FDAADGERQF AVEFVEFAAI
EAEHGIGVAA EGKAQGFGRN 201 KRIAVAVAAD PAADFEDVRN ADAGIGRLKV
VFHLAVELGQ GFEKAHREDG 251 HAVVDFVVDA EFVAARFAGL PQAQQDSVDF
AAQPCQRVGI GAAFALRQQC 301 ADAAVEAXDG LALHFGRVRG QNGGNGRIVQ
LPLHRFAVGF PRFEPADGFR 351 QAAFRAAASG FFVDLAAAFV VHVFGDVQNL
GEQAAGQGXI VGLLFVQLRQ 401 YFFNQCRAVV GSGQEFDCFD NQRRGFFVQE
VEQGLFQKFR VRRQSRVLWI 451 VQNMQLHDFS LSSAVNIVNV PQMPHPCQTV
HTLTARVPKC RLKLNAARRQ 501 RYNRPQLFFS EHHHDHDRTR QRRCIPAAVQ
PPHPLGRNRH RRAAETFRRA 551 YFGRRLRRFG CRRTXPTLPL RVSAR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 509
shows 87.8% identity over a 575 aa overlap with a predicted ORF
(ORF 509.ng) from N. gonorrhoeae:
TABLE-US-01714 m509/g509 10 20 30 40 50 60 m509.pep
MVAVCDKRAVQRTLMAQFAQQGGLFLLFVQAVVVFQACVLEKLGNHIGVFACVLAQVERH
||||||:|||||||:||||||||||||||||||||||||||||||||||||||||||||| g509
MVAVCDERAVQRTLVAQFAQQGGLFLLFVQAVVVFQACVLEKLGNHIGVFACVLAQVERH 10 20
30 40 50 60 70 80 90 100 110 120 m509.pep
HVKAEHGYGTDEVCQTAFGKQTAAVVDKGTLQFFQIIQKLLCRSIRLEKAEFAAHTQTER
||:||||:|||||||||||||:|||||||||||||||:|:| |||||||||||||:|||| g509
HVEAEHGHGTDEVCQTAFGKQAAAVVDKGTLQFFQIIEKFLGRSIRLEKAEFAAHAQTER 70 80
90 100 110 120 130 140 150 160 170 180 m509.pep
ARFAHSARHNVGDGAAVGFFGAGDFFVGRFVGQRRYIAVDFDAADGERQFAVEFVEFAAI
||||||||||||:|||| ||||||||| | | :|::||||||||:|||||:||||||: g509
ARFAHSARHNVGNGAAVRFFGAGDFFVRREGCQCHYVVVDFDAADGKRQFAVKFVEFAAV 130
140 150 160 170 180 190 200 210 220 230 240 m509.pep
EAEHGIGVAAEGKAQGFGRNKRIAVAVAADPAADFEDVRNADAGIGRLKVVFHLAVELGQ
::|||||||||||||||:|||||||||||||||||:|:|||| ||||||||||||||:|| g509
KTEHGIGVAAEGKAQGFARNKRIAVAVAADPAADFKDIRNADIGIGRLKVVFHLAVEFGQ 190
200 210 220 230 240 250 260 270 280 290 300 m509.pep
GFEKAHREDGHAVVDFVVDAEFVAARFAGLPQAQQDSVDFAAQPCQRVGIGAAFALRQQC
||:|||||||||||||||||||||||||||||||: :|||||||||||||||||||||| g509
GFKKAHREDGHAVVDFVVDAEFVAARFAGLPQAQKHGVDFAAQPCQRVGIGAAFALRQQR 250
260 270 280 290 300 310 320 330 340 350 360 m509.pep
ADAAVEAXDGLALHFGRVRGQNGGNGRIVQLPLHRFAVGFPRFEPADGFRQAAFRAAASG ||||||
:||||||||||||||||||||||||||||||||||||||||||||| :::| g509
ADAAVEIQNGLALHFGRVRGQNGGNGRIVQLPLHRFAVGFPRFEPADGFRQAAFCCVVAG 310
320 330 340 350 360 370 380 390 400 410 420 m509.pep
FFVDLAAAFVVHVFGDVQNLGEQAAGQGXIVGLLFVQLRQYFFNQCRAVVGSGQEFDCFD
:|||||||||||||||:|||||| ||: |||| ||||||||||||||||||||||| || g509
IFVDLAAAFVVHVFGDIQNLGEQPAGKRQIVGLPFVQLRQYFFNQCRAVVGSGQEFDRFD 370
380 390 400 410 420 430 440 450 460 470 480 m509.pep
NQRRGFFVQEVEQGLFQKFRVRRQSRVLWIVQNMQLHDFSLSSAVNIVNVPQMPHPCQTV
|||||||||||||||||||||||||||| |||:|||||| | ||| ||||||||||||| g509
NQRRGFFVQEVEQGLFQKFRVRRQSRVLRIVQDMQLHDFPLI-AVNTVNVPQMPHPCQTV 430
440 450 460 470 490 500 510 520 530 540 m509.pep
HTLTARVPKCRLKLNAARRQRYNRPQLFFSEHHHDHDRTRQRRCIPAAVQPPHPLGRNRH
||||::|||||||||||||:|||||||||||||||:||||||| ||||||||||||||| g509
HTLTTHVPKCRLKLNAARRRRYNRPQLFFSEHHHDRDRTRQRRRTPAAVQPPHPLGRNRH 480
490 500 510 520 530 550 560 570 m509.pep
RRAAETFRRAYFGRRLRRFGCRRTCPTLPLRVSAR |||||:||||||||||||:| || || | |
||| g509 RRAAEAFRRAYFGRRLRRIGRRRPCPISPPRGSAR 540 550 560 570
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1397>:
TABLE-US-01715 a509.seq 1 ATGGTCGCTG TATGTGATGA ACGGACTGTA
CAGTGGACGT TGATGGCTCA 51 ATTCGCGCAA CAGGGCGGCT TGTTTTTGCT
CTTCGTTGAG GCTGTTGTAG 101 TCTTCCAAGC CTGCGTGTTG GAAAAGCTCG
GCAACCACAT CGGCGTGTTT 151 GCCTGCGTGT TGGCGCAGGT CGAGCGGCAT
CATGTGGAAG CCGAACACGG 201 ATACGGAACG GATGAGGTCT GCCAAACGGC
CTTCGGCAAG CAGGCGGCTG 251 CCGTTGTCGA TAAGGGAATG TTGCAATTTT
TTCAAATCAT CGAGAAATTC 301 TTGTGCCGAA GCATAAGGCT CGAGAAAGCC
GAATTTGCAG CCCATACCCA 351 AACCGAGCGC GCGCGCTTTG CCCATAGCGC
GCGCCATAAT GTAGGCAATG 401 GCGCGACGGT AGGGTTCTTC GGCGCGGGCG
GTTTCTTCGT CGGGCGATTT 451 GTCGGACAAC GCCATCACAT CGCCGTTGAC
TTTGACGCGG CGGATGGAGA 501 GCGGCAGTTC GCGGTAGAGT TTGTCGAGTT
CGCCACGGTA AAAACGGAAC 551 ACGGCATCGG CGTGGCGGCG GAAGGCAAAA
CGCAAGGTTT CGGCAGAAAC 601 GAACGGATTG CCGTCGCGGT CGCCGCCGAT
CCAGCCGCCG ATTTTGAGGA 651 TGTCCGGAAC GCGGACATCG GGATAGGCCG
TCTGAAAGTC GTGTTCCATC 701 TTGCGGTAGA GCTTGGGCAG GGCTTCAAAA
AAGCTCATCG GAAAGATGGA 751 CACGCCGTTG TTGATTTCGT CGTTGACGCT
GAGTTTGTGG CGGCGCGTTT 801 CGCTGGTCTG CCACAAGCCC AGCAGGATAG
TGTCGATTTC GCGGCGCAGC 851 CGTGCCAGCG CGTCGGCATT GGTACAGCGT
TCGCGTTGCG GCAGCAGCGC 901 GCGGATGCGG CGGTTGAAAT TCAAGACGGT
CTGGCGTTGC ACTTCGGTCG 951 GGTGCGCGGT CAAAACGGCG GTAACGGACG
TATTGTCCAA CTGCCGCTGC 1001 ACCGATTTGC CGTCGGCTTT CCCCGCTTTG
AGCCTGCGGA CGGTTTCCGT 1051 CAGGCTGCCT TCCGCGCCGC CGCGTCCGGC
TTCTTCGTGG ATTTGGCGGC 1101 GGCGTTCGTG GTGCACGTCT TCGGCGATGT
TCAAAATCTG GGCGAACAGG 1151 CCGCAGGCCA AGGTTAAATC GTGGGTTTGT
TGTTCGTCCA ATTGCGGCAA 1201 TACTTTTTCA ATCAATGCCG CGCTGTCGTC
GGAAGTGGAC AAGAGTTTGA 1251 CCGTTTCGAC AACCAACGGC GAGGCTTCTT
CGTGCAGGAG GTTGAACAGG 1301 GATTGTTTCA GAAATTCCGC GTCCGCCGCC
AAAGCCGCGT CCTTTGGATT 1351 GTTCAGAATA TGCAGTTGCA TGATTTTTCT
CTCATTGCCG TAAATACTGT 1401 AAATGTACCT CAAATGCCGC ATCCGTGCCA
AACCGTTCAC ACTTTAACCG 1451 CCCGTGTCCC GAAATGCCGT CTGAAGTTGA
ACGCCGCCCG ACGGCAGCGT 1501 TACAATCGCC CACAACTGTT TTT.TCCGAA
CATCATCATG ACCACGACCG 1551 AACACGACAA CGACGATGCA TTCCTGCTGC
GGTACAGCCG CCACATCCTC 1601 TTGGACGAAA TTGGCATCGA AGGGCAGCAG
AAACTTTCCG CCGCGCATAT 1651 TTTGGTCGTC GGCTGCGGCG GTTTGGGTGC
CGCCGCCGAT GCCCTATCTC 1701 GCCGCTTCCG GCATCGGCAC GCTGA
This corresponds to the amino acid sequence <SEQ ID 1398; ORF
509.a>:
TABLE-US-01716 a509.pep 1 MVAVCDERTV QWTLMAQFAQ QGGLFLLFVE
AVVVFQACVL EKLGNHIGVF 51 ACVLAQVERH HVEAEHGYGT DEVCQTAFGK
QAAAVVDKGM LQFFQIIEKF 101 LCRSIRLEKA EFAAHTQTER ARFAHSARHN
VGNGATVGFF GAGGFFVGRF 151 VGQRHHIAVD FDAADGERQF AVEFVEFATV
KTEHGIGVAA EGKTQGFGRN 201 ERIAVAVAAD PAADFEDVRN ADIGIGRLKV
VFHLAVELGQ GFKKAHRKDG 251 HAVVDFVVDA EFVAARFAGL PQAQQDSVDF
AAQPCQRVGI GTAFALRQQR 301 ADAAVEIQDG LALHFGRVRG QNGGNGRIVQ
LPLHRFAVGF PRFEPADGFR 351 QAAFRAAASG FFVDLAAAFV VHVFGDVQNL
GEQAAGQG*I VGLLFVQLRQ 401 YFFNQCRAVV GSGQEFDRFD NQRRGFFVQE
VEQGLFQKFR VRRQSRVLWI 451 VQNMQLHDFS LIAVNTVNVP QMPHPCQTVH
TLTARVPKCR LKLNAARRQR 501 YNRPQLFXSE HHHDHDRTRQ RRCIPAAVQP
PHPLGRNWHR RAAETFRRAY 551 FGRRLRRFGC RXPCPISPLP ASAR* m509/a509
93.0% identity in 575 aa overlap 10 20 30 40 50 60 m509.pep
MVAVCDKRAVQRTLMAQFAQQGGLFLLFVQAVVVFQACVLEKLGNHIGVFACVLAQVERH
||||||:|:|| |||||||||||||||||:|||||||||||||||||||||||||||||| a509
MVAVCDERTVQWTLMAQFAQQGGLFLLFVEAVVVFQACVLEKLGNHIGVFACVLAQVERH 10 20
30 40 50 60 70 80 90 100 110 120 m509.pep
HVKAEHGYGTDEVCQTAFGKQTAAVVDKGTLQFFQIIQKLLCRSIRLEKAEFAAHTQTER
||:||||||||||||||||||:||||||| |||||||:|:|||||||||||||||||||| a509
HVEAEHGYGTDEVCQTAFGKQAAAVVDKGMLQFFQIIEKFLCRSIRLEKAEFAAHTQTER 70 80
90 100 110 120 130 140 150 160 170 180 m509.pep
ARFAHSARHNVGDGAAVGFFGAGDFFVGRFVGQRRYIAVDFDAADGERQFAVEFVEFAAI
||||||||||||:||:||||||| ||||||||||::||||||||||||||||||||||:: a509
ARFAHSARHNVGNGATVGFFGAGGFFVGRFVGQRHHIAVDFDAADGERQFAVEFVEFATV 130
140 150 160 170 180 190 200 210 220 230 240 m509.pep
EAEHGIGVAAEGKAQGFGRNKRIAVAVAADPAADFEDVRNADAGIGRLKVVFHLAVELGQ
::|||||||||||:||||||:||||||||||||||||||||| ||||||||||||||||| a509
KTEHGIGVAAEGKTQGFGRNERIAVAVAADPAADFEDVRNADIGIGRLKVVFHLAVELGQ 190
200 210 220 230 240 250 260 270 280 290 300 m509.pep
GFEKAHREDGHAVVDFVVDAEFVAARFAGLPQAQQDSVDFAAQPCQRVGIGAAFALRQQC
||:||||:|||||||||||||||||||||||||||||||||||||||||||:||||||| a509
GFKKAHRKDGHAVVDFVVDAEFVAARFAGLPQAQQDSVDFAAQPCQRVGIGTAFALRQQR 250
260 270 280 290 300 310 320 330 340 350 360 m509.pep
ADAAVEAXDGLALHFGRVRGQNGGNGRIVQLPLHRFAVGFPRFEPADGFRQAAFRAAASG ||||||
|||||||||||||||||||||||||||||||||||||||||||||||||||| a509
ADAAVEIQDGLALHFGRVRGQNGGNGRIVQLPLHRFAVGFPRFEPADGFRQAAFRAAASG 310
320 330 340 350 360 370 380 390 400 410 420 m509.pep
FFVDLAAAFVVHVFGDVQNLGEQAAGQGXIVGLLFVQLRQYFFNQCRAVVGSGQEFDCFD
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || a509
FFVDLAAAFVVHVFGDVQNLGEQAAGQGXIVGLLFVQLRQYFFNQCRAVVGSGQEFDRFD 370
380 390 400 410 420 430 440 450 460 470 480 m509.pep
NQRRGFFVQEVEQGLFQKFRVRRQSRVLWIVQNMQLHDFSLSSAVNIVNVPQMPHPCQTV
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| a509
NQRRGFFVQEVEQGLFQKFRVRRQSRVLWIVQNMQLHDFSLI-AVNTVNVPQMPHPCQTV 430
440 450 460 470 490 500 510 520 530 540 m509.pep
HTLTARVPKCRLKLNAARRQRYNRPQLFFSEHHHDHDRTRQRRCIPAAVQPPHPLGRNRH
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | a509
HTLTARVPKCRLKLNAARRQRYNRPQLFXSEHHHDHDRTRQRRCIPAAVQPPHPLGRNWH 480
490 500 510 520 530 550 560 570 m509.pep
RRAAETFRRAYFGRRLRRFGCRRTXPTLPLRVSARX |||||||||||||||||||||| | ||
:|||| a509 RRAAETFRRAYFGRRLRRFGCRXPCPISPLPASARX 540 550 560 570
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1399>:
TABLE-US-01717 g510.seq 1 atgccttcgc ggacaccgca gggaaaaagg
ggttattcct gccccaagcg 51 ggatagtgcc ttttggcagg cgttgtccat
atcggttatt ttacgcgcaa 101 aatcgccgat tgccaaatcg ccgccgttca
gggaggtttt caataggtcg 151 tggacgacgt tgagcgcggc cataatgacg
attttttcgc tgtccgcgac 201 gcggccgcct tcgcggatgg cttcggcttt
gccgttgagc attccgactg 251 cctgcaacag tgtgtctttt tcttctgccg
gcgtgttgac agtcagccgg 301 ggcgtgcatg acttcgatgt agacttgttc
gatgttcatc ctttaatcct 351 tattgctgcg tttcctgccg ttgggggagg
cgcgctgcca gtgcgctga
This corresponds to the amino acid sequence <SEQ ID 1400; ORF
510.ng>:
TABLE-US-01718 g510.pep 1 MPSRTPQGKR GYSCPKRDSA FWQALSISVI
LRAKSPIAKS PPFREVFNRS 51 WTTLSAAIMT IFSLSATRPP SRMASALPLS
IPTACNSVSF SSAGVLTVSR 101 GVHDFDVDLF DVHPLILIAA FPAVGGGALP VR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1401>:
TABLE-US-01719 m510.seq 1 ATGCCTTCGC GGACACCGCA GGGnAAAAGG
GGTTATTCCT GCGCCAAGCG 51 GGATAGTGCT TTTTGGCAGG CGTTGTCCAT
ATCGGCTATT TTACGCGCAA 101 AATCGCCGAT TGCCAAATCG CCGCCGTTCA
GGGAGGTTTT CAACAGGTCG 151 TGGACGACGT TGAGCGCGGC CATAATGACG
ATTTTTTCGC TGTCCGCGAC 201 GCGTCCGCCT TCGCGGATGG CTTCGGCTTT
GCCGTTGAGC ATTCCGACTG 251 CCTGCAACAG TGTGTCTTTT TCTTCTGCCG
GCGTGTTGAC GGTCAGCCGG 301 GGCGTGCAwG ACTTCsAtGT GGACTTGTTC
GATGTTCATC CTTTAATCCT 351 TATTGCTGCG TTTCCTGCCA TTGGGGGAGG
CGCGCTGCCA GTGCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1402; ORF
510>:
TABLE-US-01720 m510.pep 1 MPSRTPQGKR GYSCAKRDSA FWQALSISAI
LRAKSPIAKS PPFREVFNRS 51 WTTLSAAIMT IFSLSATRPP SRMASALPLS
IPTACNSVSF SSAGVLTVSR 101 GVXDFXVDLF DVHPLILIAA FPAIGGGALP VR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 510
shows 96.2% identity over a 132 aa overlap with a predicted ORF
(ORF 510.ng) from N. gonorrhoeae:
TABLE-US-01721 m510/g510 10 20 30 40 50 60 m510.pep
MPSRTPQGKRGYSCAKRDSAFWQALSISAILRAKSPIAKSPPFREVFNRSWTTLSAAIMT
|||||||||||||| |||||||||||||:||||||||||||||||||||||||||||||| g510
MPSRIPQGKRGYSCPKRDSAFWQALSISVILRAKSPIAKSPPFREVFNRSWITLSAAIMT 10 20
30 40 50 60 70 80 90 100 110 120 m510.pep
IFSLSATRPPSRMASALPLSIPTACNSVSFSSAGVLTVSRGVXDFXVDLFDVHPLILIAA
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| g510
IFSLSATRPPSRMASALPLSIPTACNSVSFSSAGVLTVSRGVHDFDVDLFDVHPLILIAA 70 80
90 100 110 120 130 m510.pep FPAIGGGALPVRX |||:||||||||| g510
FPAVGGGALPVRX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1403>:
TABLE-US-01722 a510.seq 1 ATGCCTTCGC GGACACCGCA GGGAAAAAGG
GGTTATTCCT GCGCCAAGCG 51 GGATAGTGCT TTTTGGCAGG CGTTGTCCAT
ATCGGCTATT TTACGCGCAA 101 AATCGCCGAT TGCCAAATCG CCGCCGTTCA
GGGAGGTTTT CAACAGGTCG 151 TGGACGACGT TGAGCGCGGC CATAATGACG
ATTTTTTCGC TGTCCGCGAC 201 GCGTCCGCCT TCGCGGATGG CTTCGGCTTT
GCCGTTGAGC ATTCCGACTG 251 CCTGCAACAG TGTGTCTTTT TCTTCTGCCG
GCGTGTTGAC GGTCAGCCGG 301 G.CGTGCATG ACTTCGATGT GGACTTGTTC
GATGTTCATC CTTTAATCCT 351 TATTGCTGCG TTTCCTGCCG TTGGGGGAGG
CGCGCTGCCA GTGCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1404; ORF
510.a>:
TABLE-US-01723 a510.pep 1 MPSRTPQGKR GYSCAKRDSA FWQALSISAI
LRAKSPIAKS PPFREVFNRS 51 WTTLSAAIMT IFSLSATRPP SRMASALPLS
IPTACNSVSF SSAGVLTVSR 101 XVHDFDVDLF DVHPLILIAA FPAVGGGALP VR*
m510/a510 97.0% identity in 132 aa overlap 10 20 30 40 50 60
m510.pep
MPSRTPQGKRGYSCAKRDSAFWQALSISAILRAKSPIAKSPPFREVFNRSWTTLSAAIMT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a510
MPSRTPQGKRGYSCAKRDSAFWQALSISAILRAKSPIAKSPPFREVFNRSWTTLSAAIMT 10 20
30 40 50 60 70 80 90 100 110 120 m510.pep
IFSLSATRPPSRMASALPLSIPTACNSVSFSSAGVLTVSRGVXDFXVDLFDVHPLILIAA
|||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| a510
IFSLSATRPPSRMASALPLSIPTACNSVSFSSAGVLTVSRXVHDFDVDLFDVHPLILIAA 70 80
90 100 110 120 130 m510.pep FPAIGGGALPVRX |||:||||||||| a510
FPAVGGGALPVRX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1405>:
TABLE-US-01724 g512.seq 1 atgaaagtgc ttgttttagg tgcgggtgtt
gccggcgtat cctccgtgtg 51 gtatctggca gaggccggac atgaagtaac
ggtcatcgac cgcaccgagg 101 gtgtggcgat ggaaaccagt tttgccaatg
caggccagct ttcttacggc 151 tataccacgc cttgggctgc acccggtatt
ccgaccaaag cactgaaacg 201 gctgtttaaa agccatccgc ctttactgtt
ccgccctgac ggcggcctgt 251 atcaaatcga atggctgtgg cggatgctgc
aaaactgcac ggcaacgcgc 301 tatcaaatca ataaagagcg catggtcagg
atttccgaat acagccgtga 351 aatgttccgc cgttttgaag cgcaaaccga
catgaatttt gagggacgca 401 aaaaagggac gttgcagatt ttccgccaaa
ccgaagaagt cgaagcggca 451 aaacaagaca ttgccgtttt ggaacgctac
ggcgtgccgt accgccgtct 501 gaagcccgaa gaatgcgcag aattcgagcc
tgcgctggca cgcgttaccg 551 ccaaaattgt cggcggtctg cacctgcctg
cggatgcgac cggcgactgc 601 cgcctcttca ccgaaaacct gtacaaattg
tgtcaagaga agggggtacg 651 gttctacttc aaccaaacca tcagccgcat
cgaccacaac gggctgcgca 701 tcaaagccgt tgaaacgaaa cagggcggtt
tgaaacagat gccgttgtct 751 gcgcgctcgg ctgcttcagc aggactgtgt
tggcgcagtt ggatctcaat 801 ctgcccattt atcccgtcaa aggctattcc ttga
This corresponds to the amino acid sequence <SEQ ID 1406; ORF
512.ng>:
TABLE-US-01725 g512.pep 1 MKVLVLGAGV AGVSSVWYLA EAGHEVTVID
RTEGVAMETS FANAGQLSYG 51 YTTPWAAPGI PTKALKRLFK SHPPLLFRPD
GGLYQIEWLW RMLQNCTATR 101 YQINKERMVR ISEYSREMFR RFEAQTDMNF
EGRKKGTLQI FRQTEEVEAA 151 KQDIAVLERY GVPYRRLKPE ECAEFEPALA
RVTAKIVGGL HLPADATGDC 201 RLFTENLYKL CQEKGVRFYF NQTISRIDHN
GLRIKAVETK QGGLKQMPLS 251 ARSAASAGLC WRSWISICPF IPSKAIP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1407>:
TABLE-US-01726 m512.seq (partial) 1 ..GTTTTGGAAC GCTACGGCGT
GCCGTACCGC CGTCTGAAAC CCGAAGAATG 51 TGCAGAATTT GAGCCTGCGC
TGGCACGCGT TACCGCCAAA ATTGCCGGCG 101 GCCTGCACCT GCCTGCAGAT
GCGACCGGCG ACTggCGCCT CTTCACTGAA 151 AACCTATACA AATTGTGTCA
GGAAAAGGGC GTACGGTTTC ATTTCAACCA 201 AAACATCAGC CGCATCGACC
ACAACGGGCT GCGCATCAAA ACCGTTGAAA 251 CCAAACAGGG CGGTTTGAAG
CAGATGCCGT TGTCTGCGCG CTCGGTTGCT 301 TCAGCAGGAC GGTTTTGGCG
CAGTTGGATC TCAATCTGCC CATTTATCCC 351 GTCAAAGGCT ATTCCTTGA
This corresponds to the amino acid sequence <SEQ ID 1408; ORF
512>:
TABLE-US-01727 m512.pep (partial) 1 ..VLERYGVPYR RLKPEECAEF
EPALARVTAK IAGGLHLPAD ATGDWRLFTE 51 NLYKLCQEKG VRFHFNQNIS
RIDHNGLRIK TVETKQGGLK QMPLSARSVA 101 SAGRFWRSWI SICPFIPSKA IP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 512
shows 93.4% identity over a 122 aa overlap with a predicted ORF
(ORF 512.ng) from N. gonorrhoeae:
TABLE-US-01728 m512/g512 10 20 30 m512.pep
VLERYGVPYRRLKPEECAEFEPALARVTAK |||||||||||||||||||||||||||||| g512
TDMNFEGRKKGTLQIFRQTEEVEAAKQDIAVLERYGVPYRRLKPEECAEFEPALARVTAK 130
140 150 160 170 180 40 50 60 70 80 90 m512.pep
IAGGLHLPADATGDWRLFTENLYKLCQEKGVRFHFNQNISRIDHNGLRIKTVETKQGGLK
|:|||||||||||| ||||||||||||||||||:|||:||||||||||||:||||||||| g512
IVGGLHLPADATGDCRLFTENLYKLCQEKGVRFYFNQTISRIDHNGLRIKAVETKQGGLK 190
200 210 220 230 240 100 110 120 m512.pep
QMPLSARSVASAGRFWRSWISICPFIPSKAIP ||||||||:|||| |||||||||||||||||
g512 QMPLSARSAASAGLCWRSWISICPFIPSKAIP 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1409>:
TABLE-US-01729 a512.seq 1 ATGAAAGTGC TTGTTTTAGG TGCTGGTGTT
GCCGGCGTAT CTTCCGCGTG 51 GTATCTGGCA GAGGCAGGAC ATGAAGTAAC
GGTCATCGAC CGCGCCGAGG 101 GCGTGGCGAT GGAAACCAGT TTTGCCAACG
CAGGCCAGCT TTCTTACGGC 151 TATACCACGC CTTGGGCTGC ACCCGGTATT
CCGACCAAAG CACTGAAATG 201 GCTGTTTAAA AGCCATCCGC CTTTGCTGTT
TCGCCCCGAC GGCAGCCTGT 251 ATCAAATCGA ATGGCTGTGG CAGATGCTGC
AACACTGCAC GGCAGCGCGC 301 TATCAAATCA ATAAAGAGCG CATGGTCAGG
ATGTCCGAAT ACAGCCGTGA 351 AATGTTCCGC CGTTTTGAAG CGCAAACCGG
CATGAATTTT GAGGGACGCA 401 AAAAAGGGAC GTTGCAGATT TTCCGCCAAA
CCAAAGAAGT CGAAGCGGCA 451 AAACAAGACA TTGCCGTTTT GGAACGCTAC
GGCGTGCCGT ACCGCCGTCT 501 GAAGCCCGAA GAATGCGCAG AATTCGAGCC
TGCGCTGGCA CGCGTTACCG 551 CCAAAATTGC CGGCGGCCTG CACCTGCCCG
CAGACGCGAC CGGCGACTGC 601 CGCCTCTTCA CTGAAAACCT GTACAAATTG
TGTCAGGAAA AGGGCGTACG 651 GTTTCATTTC AACCAAACCA TCAGCCGCAT
CGACCACAAC GGGCTGCGCA 701 TCAAAACCGT TGAAACGAAA CAGGGCGGTT
TGAAGCAGAT GCCGTTGTCT 751 GCGCGCTCGG CTGCTTCAGC AGGACGGTTT
TGGCGCAAGT GGATCTCAAT 801 CTGCCGATTT ATCCCGTCAA AGGCTATTCC TTGA
This corresponds to the amino acid sequence <SEQ ID 1410; ORF
512.a>:
TABLE-US-01730 a512.pep 1 MKVLVLGAGV AGVSSAWYLA EAGHEVTVID
RAEGVAMETS FANAGQLSYG 51 YTTPWAAPGI PTKALKWLFK SHPPLLFRPD
GSLYQIEWLW QMLQHCTAAR 101 YQINKERMVR MSEYSREMFR RFEAQTGMNF
EGRKKGTLQI FRQTKEVEAA 151 KQDIAVLERY GVPYRRLKPE ECAEFEPALA
RVTAKIAGGL HLPADATGDC 201 RLFTENLYKL CQEKGVRFHF NQTISRIDHN
GLRIKTVETK QGGLKQMPLS 251 ARSAASAGRF WRKWISICRF IPSKAIP* m512/a512
95.9% identity in 122 aa overlap 10 20 30 m512.pep
VLERYGVPYRRLKPEECAEFEPALARVTAK |||||||||||||||||||||||||||||| a512
TGMNFEGRKKGTLQIFRQTKEVEAAKQDIAVLERYGVPYRRLKPEECAEFEPALARVTAK 130
140 150 160 170 180 40 50 60 70 80 90 m512.pep
IAGGLHLPADATGDWRLFTENLYKLCQEKGVRFHFNQNISRIDHNGLRIKTVETKQGGLK
|||||||||||||| ||||||||||||||||||||||:|||||||||||||||||||||| a512
IAGGLHLPADATGDCRLFTENLYKLCQEKGVRFHFNQTISRIDHNGLRIKTVETKQGGLK 190
200 210 220 230 240 100 110 120 m512.pep
QMPLSARSVASAGRFWRSWISICPFIPSKAIPX ||||||||:||||||||:||||| |||||||||
a512 QMPLSARSAASAGRFWRKWISICRFIPSKAIPX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1411>:
TABLE-US-01731 g513.seq 1 ATGGGTTCCG CGCCGAACGC CGCCGCCGCC
GCCGAAGTGA AACACCCTGT 51 TTCGCAAGGT ATGATTCAAA TGCTGGGCGT
GTTTGTCGAT ACCATCATCG 101 TTTGTTCTTG CACCGCCTTC ATCATCTTGA
TTTACCAACA GCCTTATGGC 151 GATTTGAGCG GTGCGGCGCT GAcgcAGGCG
GCGATTGTCA GCCAAGTGGG 201 GCAATGGGGC GCGGGTTTCC TCGCCGTCAT
CCTGTTTATG TTTGCCTTTT 251 CCACCGTTAT CGGCAACTAT GCCTATGCCG
AGTCCAACGT CCAATTCATC 301 AAAAGCCATT GGCTGATTAC CGCCGTTTTC
CGTATGCTGG TTTTGGCGTG 351 GGTCTATTTC GGCGCGGTTG CCAATGTGCC
TTTGGTCTGG GATATGGCGG 401 ATATGGCGAT GGGCATCATG GCGTGGATCA
ACCTCGTCGC CATCCTGCTG 451 CTCTCGCCat TGGCGTTTAT GCTGCTGCGC
GATTACACCG CCAAGCTGAA 501 AATGGGCAAA GACCCCGAGT TCAAACTTTc
cgAACATCCG GGCCTGAAAC 551 GCCGCATCAA ATCCGATGTT TGGTAA
This corresponds to the amino acid sequence <SEQ ID 1412; ORF
513.ng>:
TABLE-US-01732 g513.pep 1 MGSAPNAAAA AEVKHPVSQG MIQMLGVFVD
TIIVCSCTAF IILIYQQPYG 51 DLSGAALTQA AIVSQVGQWG AGFLAVILFM
FAFSTVIGNY AYAESNVQFI 101 KSHWLITAVF RMLVLAWVYF GAVANVPLVW
DMADMAMGIM AWINLVAILL 151 LSPLAFMLLR DYTAKLKMGK DPEFKLSEHP
GLKRRIKSDV W*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1413>:
TABLE-US-01733 m513.seq 1 ATGGGTTCCG CGCCGAACGC CGCCGCCGCC
GCCGAAGTGA AACACCCTGT 51 TTCGCAAGGT ATGATTCAAA TGCTGGGCGT
GTTTGTCGAT ACCATCATCG 101 TTTGTTCTTG CACCGCCTTC ATCATCTTGA
TTTACCAACA GCCTTATGGC 151 GATTTGAGCG GTGCGGCGCT GAcgcAGGCG
GCGATTGTCA GCCAAGTGGG 201 GCAATGGGGC GCGGGTTTCC TCGCCGTCAT
CCTGTTTATG TTTGCCTTTT 251 CCACCGTTAT CGGCAACTAT GCCTATGCCG
AGTCCAACGT CCAATTCATC 301 AAAAGCCATT GGCTGATTAC CGCCGTTTTC
CGTATGCTGG TTTTGGCGTG 351 GGTCTATTTC GGCGCGGTTG CCAATGTGCC
TTTGGTCTGG GATATGGCGG 401 ATATGGCGAT GGGCATCATG GCGTGGATCA
ACCTCGTCGC CATCCTGCTG 451 CTCTCGCCat TGGCGTTTAT GCTGCTGCGC
GATTACACCG CCAAGCTGAA 501 AATGGGCAAA GACCCCGAGT TCAAACTTTc
cgAACATCCG GGCCTGAAAC 551 GCCGCATCAA ATCCGATGTT TGGTAA
This corresponds to the amino acid sequence <SEQ ID 1414; ORF
513>:
TABLE-US-01734 m513.pep 1 MGSAPNAAAA AEVKHPVSQG MIQMLGVFVD
TIIVCSCTAF IILIYQQPYG 51 DLSGAALTQA AIVSQVGQWG AGFLAVILFM
FAFSTVIGNY AYAESNVQFI 101 KSHWLITAVF RMLVLAWVYF GAVANVPLVW
DMADMAMGIM AWINLVAILL 151 LSPLAFMLLR DYTAKLKMGK DPEFKLSEHP
GLKRRIKSDV W*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 513
shows 99.5% identity over a 191 aa overlap with a predicted ORF
(ORF 513.ng) from N. gonorrhoeae:
TABLE-US-01735 m513/g513 10 20 30 40 50 60 m513.pep
MGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g513
MGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQA 10 20
30 40 50 60 70 80 90 100 110 120 m513.pep
AIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g513
AIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYF 70 80
90 100 110 120 130 140 150 160 170 180 m513.pep
GAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMXLRDYTAKLKMGKDPEFKLSEHP
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| g513
GAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHP 130
140 150 160 170 180 190 m513.pep GLKRRIKSDVW ||||||||||| g513
GLKRRIKSDVW 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1415>:
TABLE-US-01736 a513.seq 1 ATGAACGAGA ACTTTACCGA ATGGCTGCAC
GGCTGGGTCG GCGCCATCAA 51 CGATCCGATG TGGTCATACT TGGTTTATNT
GCTTTTGGGT ACGGGGCTTT 101 TCTTCACCGT AACCACGGGC TTTGTCCAAT
TCCGCCTGTT CGGGCGCAGC 151 ATCAAAGAAA TGCTCGGCGG CCGCAAACAG
GGGGACGACC CTCACGGCAT 201 CACGCCGTTT CAGGCATTTG TAACCGGCCT
TGCCAGCCGC GTGGGCGTGG 251 GCAATATCGC GGGCGTGGCC ATCGCCATCA
AAGTCGGCGG ACCGGGCGCG 301 GTGTTTTGGA TGTGGGTAAC CGCCTTAATC
GGTATGAGTT CGGCGTTTGT 351 CGAATCTTCG CTGGCGCAGC TCTTTAAAGT
CCGCGACTAC GACAACCACC 401 ATTTCCGGGG CGGCCCTGCC TACTACATCA
CTCAAGGGCT GGGGCAGAAA 451 TGGCTGGGCG TGTTGTTCGC CCTGAGCCTG
ATTTTCTGTT TCGGCTTTGT 501 GTTTGAAGCG GTTCAGACCA ATACCATTGC
CGATACCGTC AAAGCGGCGT 551 GGGGTTGGGA GCCTCATTAT GTCGGCGTCG
CCCTGGTGAT TTTAACCGCG 601 CCGATTATCT TCGGCGGCAT CAGGCGCATA
TCTAAAGCGG CGGAAATCGT 651 CGTCCCCCTG ATGGCGGTTT TGTACCTCTT
TATCGCGCTT TTCATCATTT 701 TGACCAATAT TCCGATGATT CCGGACGTGT
TCGGTCAGAT TTTTTCGGGC 751 GCGTTCAAAT TCGACGCGGC AGCAGGCGGC
TTACTCGGCG GTCTGATTTC 801 GCAAACGATG ATGATGGGCA TCAAACGCGG
CCTGTATTCC AACGAGGCGG 851 GTATGGGTTC CGCGCCGAAC GCCGCCGCCG
CCGCCGAAGT GAAACACCCT 901 GTTTCGCAAG GTATGATTCA AATGCTGGGC
GTGTTTGTCG ATACCATCAT 951 CGTTTGTTCT TGCACCGCCT TCATCATCTT
GATTTACCAA CAGCCTTACG 1001 GCGATTTGAG CGGTGCGGCG CTGACGCAGG
CGGCGATTGT CAGCCAAGTG 1051 GGGCAATGGG GCGCGGGCTT CCTCGCCGTC
ATCCTGTTTA TGTTTGCCTT 1101 TTCCACCGTT ATCGGCAACT ATGCCTATGC
CGAGTCCAAC GTCCAATTCA 1151 TCAAAAGCCA TTGGCTGATT ACCGCCGTTT
TCCGTATGCT GGTTTTGGCG 1201 TGGGTCTATT TCGGCGCGGT TGCCAATGTG
CCTTTGGTCT GGGATATGGC 1251 GGATATGGCG ATGGGCATTA TGGCGTGGAT
CAACCTTGTC GCCATCCTGC 1301 TGCTCTCGCC CTTGGCGTTT ATGCTGCTGC
GCGATTACAC CGCCAAGCTG 1351 AAAATGGGCA AAGACCCCGA GTTCAAACTT
TCCGAACATC CGGGCCTGAA 1401 ACGCCGTATC AAATCCGACG TTTGGTAA
This corresponds to the amino acid sequence <SEQ ID 1416; ORF
513.a>:
TABLE-US-01737 a513.pep 1 MNENFTEWLH GWVGAINDPM WSYLVYXLLG
TGLFFTVTTG FVQFRLFGRS 51 IKEMLGGRKQ GDDPHGITPF QAFVTGLASR
VGVGNIAGVA IAIKVGGPGA 101 VFWMWVTALI GMSSAFVESS LAQLFKVRDY
DNHHFRGGPA YYITQGLGQK 151 WLGVLFALSL IFCFGFVFEA VQTNTIADTV
KAAWGWEPHY VGVALVILTA 201 PIIFGGIRRI SKAAEIVVPL MAVLYLFIAL
FIILTNIPMI PDVFGQIFSG 251 AFKFDAAAGG LLGGLISQTM MMGIKRGLYS
NEAGMGSAPN AAAAAEVKHP 301 VSQGMIQMLG VFVDTIIVCS CTAFIILIYQ
QPYGDLSGAA LTQAAIVSQV 351 GQWGAGFLAV ILFMFAFSTV IGNYAYAESN
VQFIKSHWLI TAVFRMLVLA 401 WVYFGAVANV PLVWDMADMA MGIMAWINLV
AILLLSPLAF MLLRDYTAKL 451 KMGKDPEFKL SEHPGLKRRI KSDVW* m513/a513
100.0% identity in 191 aa overlap 10 20 30 m513.pep
MGSAPNAAAAAEVKHPVSQGMIQMLGVFVD |||||||||||||||||||||||||||||| a513
DAAAGGLLGGLISQTMMMGIKRGLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVD 260
270 280 290 300 310 40 50 60 70 80 90 m513.pep
TIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a513
TIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNY 320
330 340 350 360 370 100 110 120 130 140 150 m513.pep
AYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a513
AYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILL 380
390 400 410 420 430 160 170 180 190 m513.pep
LSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX
|||||||||||||||||||||||||||||||||||||||||| a513
LSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX 440 450 460 470
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1417>:
TABLE-US-01738 g515.seq 1 atggttcaaa tacaggttgt gcgcgccgcc
ggcgttgccc gtggtctgca 51 ttccgagttt gcgcgcgctg taactgccga
ggaaatagcc ttcgacaatg 101 ccgttttgaa tcacgaagcg cggcgcggtg
gcaacacctt ccgcatcaaa 151 atagctgctg cggaaagagc gggggatgtg
cggttcttcg cgcaggttga 201 ggaaatcggg caggactttt ttgccgatgc
tgtcgatcag gaaactgctt 251 tggcggtaga gcgcgccgcc ggagagtgtg
ccgacgaggt gtccgatcag 301 cccgcccgaa acggtggtat cgaagaggac
ggggtagctg cctgtcggga 351 tgctgcggct gccgagtcgg cgcaaagtgc
ggcgggcggc ggtttgaccg 401 atggtttcgg ggctgtccat atccggatgg
cggcaggcgg aatcgtacca 451 gtagtcgcgc tgcattccgt tttcgtcggc
ggcgacgacg ctgcaggaaa 501 tgctgtggtg cgtgctttgc cggtgtgcgg
caaaaccgtg ggtgttgccg 551 taaacgtatt ggtactgtcc ggtttgcacc
gccgcgcctt cggagttttc 601 gatgcggctg tccgtgtcca acgctgcctg
ttcgcattgt tttgccaagc 651 cgacggcggc ttccgtatcc aaatcccatt
cgtggtaaag gtcggggtcg 701 ccgatgtgtt gcgccatcaa ctcggggtcg
gcaagtccgg cgcaaccgtc 751 ttcggcggtg tggcgggcga tgtcggcggc
ggcgcggacg gtgtcgcgca 801 gggcttgttc ggagaagtcg gcggtgccgg
cgcggccttt gcgtttgccg 851 acgtaaacgg taatgtccag cgatttgtcc
tgctggaact cgatttgttc 901 gatttcgccc aagcgcacgc tgacgctttg
tccgagcgat tcgctgaagt 951 cggcttcggc ggcggtcgcg cccgctgctt
ttgccaagtc gagcgtgcgg 1001 cggcagaggt cgaggagttc ggaagcggtg
tggttgaaca gcataacaat 1051 ctttcttggt ggagcgttgt ggcattttaa
This corresponds to the amino acid sequence <SEQ ID 1418; ORF
515.ng>:
TABLE-US-01739 g515.pep 1 MVQIQVVRAA GVARGLHSEF ARAVTAEEIA
FDNAVLNHEA RRGGNTFRIK 51 IAAAERAGDV RFFAQVEEIG QDFFADAVDQ
ETALAVERAA GECADEVSDQ 101 PARNGGIEED GVAACRDAAA AESAQSAAGG
GLTDGFGAVH IRMAAGGIVP 151 VVALHSVFVG GDDAAGNAVV RALPVCGKTV
GVAVNVLVLS GLHRRAFGVF 201 DAAVRVQRCL FALFCQADGG FRIQIPFVVK
VGVADVLRHQ LGVGKSGATV 251 FGGVAGDVGG GADGVAQGLF GEVGGAGAAF
AFADVNGNVQ RFVLLELDLF 301 DFAQAHADAL SERFAEVGFG GGRARCFCQV
ERAAAEVEEF GSGVVEQHNN 351 LSWWSVVAF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1419>:
TABLE-US-01740 m515.seq (partial) 1 ..GGAAAGAGCG GGGGATGTGC
GTTCTTCGCG CAGGTTGAGG AAATCGGGCA 51 GGACTTTTCT GCCGATGCTG
TCGATCAGGA AACTGCTTTG GCGGTAGAGC 101 GCGCCGCCGG AGAGTGCGCC
GACGAGGTGT CCGATAAGAC CGCCCGAAAC 151 GGTGGTATCG AAGAGGACGG
GGTAGCTGCC TGTCGGGATG CTGCGGCTGC 201 CGAGTCGGCG CAAAGTGCGG
CGGGCGGCGG TTTGACCGAT GGTTTCGGGG 251 CTGTCCATAT CCGGATGGCG
GCAGGCGGAA TCGTACCAGT AGTCGCGCTG 301 CATGCCGTTT TCGTCGGCGG
CAACGACGCT GCAGGAAATG CTGTGGTGCG 351 TGCCTTGCCG GTGTGCGGCA
AAACCGTGGG TGTTGCCGTA AACGTATTGG 401 TAATGGCCGG TTTGCACCGC
CGCGCCTTCG GAGTTTTCGA TGCGCTCATC 451 CTCGTTCAGG GCGGCTTGTT
CGCATTGTTT TGCCAAGCCG ACGGCGGCTk 501 CCGTATCCAA ATCCCATTCG
TGGTAAAGGT CGGGGTCGCC GATGTGTTTT 551 GCCATCAGAC AGGCATCGGC
AAGTCCGGCG CAACCGTCTT CGGCGGTGTG 601 GCGGGCGATG TCGATGGCGG
CTTTGACGGT GTCTTGCAGG GCTTTTTCGG 651 AGAAGTCGGC AGTACTGGCG
CGGCCTTTGC GTTTGCCGAC GTAAACGGTA 701 ATGTCCAGCG ACTTGTCCTG
CTGGAACTCG ATTTGTTsGA TTTsGCCCAG 751 CCGCACGCTG ACGCTTTGTC
CCAATGATTC GCTGAAATCG GCTTCGGCGG 801 CGGTTGCGCC CGTCGCTTTT
GCCAAGTCGA GCGTGCGGCG GCAGAGGTCG 851 AGGAGTTCGG AAGCGGTGTG
GTTgAACAGC ATAGAAATCT TTCTTGATGA 901 TGCTTTGCGG CATTTTAA
This corresponds to the amino acid sequence <SEQ ID 1420; ORF
515>:
TABLE-US-01741 m515.pep (partial) 1 ..GKSGGCAFFA QVEEIGQDFS
ADAVDQETAL AVERAAGECA DEVSDKTARN 51 GGIEEDGVAA CRDAAAAESA
QSAAGGGLTD GFGAVHIRMA AGGIVPVVAL 101 HAVFVGGNDA AGNAVVRALP
VCGKTVGVAV NVLVMAGLHR RAFGVFDALI 151 LVQGGLFALF CQADGGXRIQ
IPFVVKVGVA DVFCHQTGIG KSGATVFGGV 201 AGDVDGGFDG VLQGFFGEVG
STGAAFAFAD VNGNVQRLVL LELDLXDXAQ 251 PHADALSQXF AEIGFGGGCA
RRFCQVERAA AEVEEFGSGV VEQHRNLSXX 301 CFAAF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 515
shows 85.9% identity over a 304 aa overlap with a predicted ORF
(ORF 515.ng) from N. gonorrhoeae:
TABLE-US-01742 m515/g515 10 20 30 m515.pep
GKSGGCAFFAQVEEIGQDFSADAVDQETALA ::| |||||||||||| ||||||||||| g515
AEEIAFDNAVLNHEARRGGNIFRIKIAAAERAGDVRFFAQVEEIGQDFFADAVDQETALA 30 40
50 60 70 80 40 50 60 70 80 90 m515.pep
VERAAGECADEVSDKTARNGGIEEDGVAACRDAAAAESAQSAAGGGLTDGFGAVHIRMAA
||||||||||||||: |||||||||||||||||||||||||||||||||||||||||||| g515
VERAAGECADEVSDQPARNGGIEEDGVAACRDAAAAESAQSAAGGGLTDGFGAVHIRMAA 90 100
110 120 130 140 100 110 120 130 140 150 m515.pep
GGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTVGVAVNVLVMAGLHRRAFGVFDALIL
||||||||||:|||||:||||||||||||||||||||||||||::|||||||||||| : g515
GGIVPVVALHSVFVGGDDAAGNAVVRALPVCGKTVGVAVNVLVLSGLHRRAFGVFDAAVR 150
160 170 180 190 200 160 170 180 190 200 210 m515.pep
VQGGLFALFCQADGGXRIQIPFVVKVGVADVFCHQTGIGKSGATVFGGVAGDVDGGFDGV ||
||||||||||| |||||||||||||||: || |:||||||||||||||| || ||| g515
VQRCLFALFCQADGGFRIQIPFVVKVGVADVLRHQLGVGKSGATVFGGVAGDVGGGADGV 210
220 230 240 250 260 220 230 240 250 260 270 m515.pep
LQGFFGEVGSTGAAFAFADVNGNVQRLVLLELDLXDXAQPHADALSQXFAEIGFGGGCAR
||:|||||::|||||||||||||||:||||||| | || ||||||: |||:||||| || g515
AQGLFGEVGGAGAAFAFADVNGNVQRFVLLELDLFDFAQAHADALSERFAEVGFGGGRAR 270
280 290 300 310 320 280 290 300 m515.pep
RFCQVERAAAEVEEFGSGVVEQHRNLSXXCFAAF ||||||||||||||||||||||| ||| :||
g515 CFCQVERAAAEVEEFGSGVVEQHNNLSWWSVVAF 330 340 350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1421>:
TABLE-US-01743 a515.seq 1 ATGGTTCAAA TAAAGGTTGT GCGCGCCGCC
GGCGTTGCCC GTGGTCTGCA 51 TTCCGAGTTT GCGCGCGCTG TAACTGCTGA
GGAAATAGCC TTCGACAATG 101 CCGTTTTGAA TCACGAAGCG CGGTGCGGTG
GCAACGCCTT CCGCATCAAA 151 ATAGCTGCTG CGGAAAGAGC GGGGGATGTG
CGGTTCTTCG CGCAGGTTGA 201 GGAAATCGGG CAGGACTTTT TTGCCGATGC
TGTCGATCAG GAAACTGCTT 251 TGGCGGTAGA GCGCTCCGCC GGAGAGTGCG
CCGACGAGGT GTCCGATAAG 301 ACCGCCCGAA ACGGTGGTAT CGAAGAGGAC
GGGGTAGTTG CCTGTCGGGA 351 TGCTGCGGCT GCCGAGTCGG CGCAAAGTGC
GGCGGGCGGC GGTTTGACCG 401 ATGGTTTCGG GGCTGTCCAT ATCCGGATGG
CGGCAGGCGG AATCGTACCA 451 GTAGTCGCGC TGCATGCCGT TTTCGTCGGC
GGCAACGACG CTGCAGGAAA 501 TGCTGTGGTG CGTGCTTTGC CGGTGTGCGG
CAAAACCGTA GGTGTTGCCG 551 TAAACGTATT GGTAATGGCC GGTTTGCACC
GCCGCGCCTT CGGAGTTTTC 601 GATGCGCTCA TCCTCGTTCA GGGCGGCTTG
TTCGCATTGT TTTGCCAAGC 651 CGACGGCGGC TTCCGTATCC AAATCCCATT
CGTGGTAAAG GTCGGGGTCG 701 CCGATGTGTT GCGCCATCAA CTCGGGGTCG
GCAAGTCCGG CGCAACCGTC 751 TTCGGCGGTG TGGCGGGCGA TGTCNNNNGC
GGCGCGGACG GTGTCGCGCA 801 GGGCTTGTTC GGAGAAATCG GCGGTGCCGG
CGCGGCCTTT GCGTTTGCCG 851 ACGTAAACGG TAATGTCCAG CGACTTGTCC
TGCTGAAACT CGATTTGTTC 901 GATTTCGCCC AGCCGCACGC TGACGCTTTG
TCCCAATGAT TCGCTGAAAT 951 CGGCTTCGGC GGCGGTTGCG CCCGTCGCTT
TTGCCAAGTC GAGCGTGCGG 1001 CGGCAGAGGT CGAGGAGTTC GGAAGCGGTG
TGGTTGAACA GCATAGAAAT 1051 CTTTCTTGAT GATGCTTTGC GGCATTTTAA
This corresponds to the amino acid sequence <SEQ ID 1422; ORF
515.a>:
TABLE-US-01744 a515.pep 1 MVQIKVVRAA GVARGLHSEF ARAVTAEEIA
FDNAVLNHEA RCGGNAFRIK 51 IAAAERAGDV RFFAQVEEIG QDFFADAVDQ
ETALAVERSA GECADEVSDK 101 TARNGGIEED GVVACRDAAA AESAQSAAGG
GLTDGFGAVH IRMAAGGIVP 151 VVALHAVFVG GNDAAGNAVV RALPVCGKTV
GVAVNVLVMA GLHRRAFGVF 201 DALILVQGGL FALFCQADGG FRIQIPFVVK
VGVADVLRHQ LGVGKSGATV 251 FGGVAGDVXX GADGVAQGLF GEIGGAGAAF
AFADVNGNVQ RLVLLKLDLF 301 DFAQPHADAL SQ*FAEIGFG GGCARRFCQV
ERAAAEVEEF GSGVVEQHRN 351 LS**CFAAF* m515/a515 92.1% identity in
304 aa overlap 10 20 30 m515.pep GKSGGCAFFAQVEEIGQDFSADAVDQETALA
::| |||||||||||| ||||||||||| a515
AEEIAFDNAVLNHEARCGGNAFRIKIAAAERAGDVRFFAQVEEIGQDFFADAVDQETALA 30 40
50 60 70 80 40 50 60 70 80 90 m515.pep
VERAAGECADEVSDKTARNGGIEEDGVAACRDAAAAESAQSAAGGGLTDGFGAVHIRMAA
|||:|||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a515
VERSAGECADEVSDKTARNGGIEEDGVVACRDAAAAESAQSAAGGGLTDGFGAVHIRMAA 90 100
110 120 130 140 100 110 120 130 140 150 m515.pep
GGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTVGVAVNVLVMAGLHRRAFGVFDALIL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a515
GGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTVGVAVNVLVMAGLHRRAFGVFDALIL 150
160 170 180 190 200 160 170 180 190 200 210 m515.pep
VQGGLFALFCQADGGXRIQIPFVVKVGVADVFCHQTGIGKSGATVFGGVAGDVDGGFDGV
||||||||||||||| |||||||||||||||: || |:||||||||||||||| | ||| a515
VQGGLFALFCQADGGFRIQIPFVVKVGVADVLRHQLGVGKSGATVFGGVAGDVXXGADGV 210
220 230 240 250 260 220 230 240 250 260 270 m515.pep
LQGFFGEVGSTGAAFAFADVNGNVQRLVLLELDLXDXAQPHADALSQXFAEIGFGGGCAR
||:|||:|::|||||||||||||||||||:||| | ||||||||||||||||||||||| a515
AQGLFGEIGGAGAAFAFADVNGNVQRLVLLKLDLFDFAQPHADALSQXFAEIGFGGGCAR 270
280 290 300 310 320 280 290 300 m515.pep
RFCQVERAAAEVEEFGSGVVEQHRNLSXXCFAAFX
||||||||||||||||||||||||||||||||||| a515
RFCQVERAAAEVEEFGSGVVEQHRNLSXXCFAAFX 330 340 350 360
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1423>:
TABLE-US-01745 g515-1.seq 1 ATGGTTCAAA TACAGGTTGT GCGCGCCGCC
GGCGTTGCCC GTGGTCTGCA 51 TTCCGAGTTT GCGCGCGCTG TAACTGCCGA
GGAAATAGCC TTCGACAATG 101 CCGTTTTGAA TCACGAAGCG CGGCGCGGTG
GCAACACCTT CCGCATCAAA 151 ATAGCTGCTG CGGAAAGAGC GGGGGATGTG
CGGTTCTTCG CGCAGGTTGA 201 GGAAATCGGG CAGGACTTTT TTGCCGATGC
TGTCGATCAG GAAACTGCTT 251 TGGCGGTAGA GCGCGCCGCC GGAGAGTGTG
CCGACGAGGT GTCCGATCAG 301 CCCGCCCGAA ACGGTGGTAT CGAAGAGGAC
GGGGTAGCTG CCTGTCGGGA 351 TGCTGCGGCT GCCGAGTCGG CGCAAAGTGC
GGCGGGCGGC GGTTTGACCG 401 ATGGTTTCGG GGCTGTCCAT ATCCGGATGG
CGGCAGGCGG AATCGTACCA 451 GTAGTCGCGC TGCATTCCGT TTTCGTCGGC
GGCAACGACG CTGCAGGAAA 501 TGCTGTGGTG CGTGCTTTGC CGGTGTGCGG
CAAAACCGTG GGTGTTGCCG 551 TAAACGTATT GGTAGTGTCC GGTTTGCACC
GCCGCGCCTT CGGAGTTTTC 601 GATGCGGCTG TCCGTGTCCA ACGCTGCCTG
TTCGCATTGT TTTGCCAAGC 651 CGACGGCGGC TTCCGTATCC AAATCCCATT
CGTGGTAAAG GTCGGGGTCG 701 CCGATGTGTT GCGCCATCAA CTCGGGGTCG
GCAAGTCCGG CGCAACCGTC 751 TTCGGCGGTG TGGCGGGCGA TGTCGGCGGC
GGCGCGGACG GTGTCGCGCA 801 GGGCTTGTTC GGAGAAGTCG GCGGTGCCGG
CGCGGCCTTT GCGTTTGCCG 851 ACGTAAACGG TAATGTCCAG CGATTTGTCC
TGCTGGAACT CGATTTGTTC 901 GATTTCGCCC AAGCGCACGC TGACGCTTTG
TCCGAGCGAT TCGCTGAAGT 951 CGGCTTCGGC GGCGGTCGCG CCCGCTGCTT
TTGCCAAGTC GAGCGTGCGG 1001 CGGCAGAGGT CGAGGAGTTC GGAAGCGGTG
TGGTTGAACA GCATAACAAT 1051 CTTTCTTGGT GGAGCGTTGT GGCATTTTAA
This corresponds to the amino acid sequence <SEQ ID 1424; ORF
515-1.ng>:
TABLE-US-01746 g515-1.pep 1 MVQIQVVRAA GVARGLHSEF ARAVTAEEIA
FDNAVLNHEA RRGGNTFRIK 51 IAAAERAGDV RFFAQVEEIG QDFFADAVDQ
ETALAVERAA GECADEVSDQ 101 PARNGGIEED GVAACRDAAA AESAQSAAGG
GLTDGFGAVH IRMAAGGIVP 151 VVALHSVFVG GNDAAGNAVV RALPVCGKTV
GVAVNVLVVS GLHRRAFGVF 201 DAAVRVQRCL FALFCQADGG FRIQIPFVVK
VGVADVLRHQ LGVGKSGATV 251 FGGVAGDVGG GADGVAQGLF GEVGGAGAAF
AFADVNGNVQ RFVLLELDLF 301 DFAQAHADAL SERFAEVGFG GGRARCFCQV
ERAAAEVEEF GSGVVEQHNN 351 LSWWSVVAF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1425>:
TABLE-US-01747 m515-1.seq 1 ATGGTTCAAA TACAGGTTGT GCGCGCCGCC
GGCGTTGCCC GTGGTCTGCA 51 TACCGAGTTT GCGCGCGCTG TAACTGCTGA
GGAAATAGCC TTCGACAATG 101 CCGTTTTGAA TCACGAAGCG CGGTGCGGTG
GCAACGCCTT CCGCATCAAA 151 ATAGCTGCTG CGGAAAGAGC GGGGGATGTG
CGGTTCTTCG CGCAGGTTGA 201 GGAAATCGGG CAGGACTTTT TTGCCGATGC
TGTCGATCAG GAAACTGCTT 251 TGGCGGTAGA GCGCGCCGCC GGAGAGTGCG
CCGACGAGGT GTCCGATAAG 301 ACCGCCCGAA ACGGTGGTAT CGAAGAGGAC
GGGGTAGCTG CCTGTCGGGA 351 TGCTGCGGCT GCCGAGTCGG CGCAAAGTGC
GGCGGGCGGC GGTTTGACCG 401 ATGGTTTCGG GGCTGTCCAT ATCCGGATGG
CGGCAGGCGG AATCGTACCA 451 GTAGTCGCGC TGCATGCCGT TTTCGTCGGC
GGCAACGACG CTGCAGGAAA 501 TGCTGTGGTG CGTGCCTTGC CGGTGTGCGG
CAAAACCGTG GGTGTTGCCG 551 TAAACGTATT GGTAATGGCC GGTTTGCACC
GCCGCGCCTT CGGAGTTTTC 601 GATGCGCTCA TCCTCGTTCA GGGCGGCTTG
TTCGCATTGT TTTGCCAAGC 651 CGACGGCGGC TTCCGTATCC AAATCCCATT
CGTGGTAAAG GTCGGGGTCG 701 CCGATGTGTT TTGCCATCAG ACAGGCATCG
GCAAGTCCGG CGCAACCGTC 751 TTCGGCGGTG TGGCGGGCGA TGTCGATGGC
GGCTTTGACG GTGTCTTGCA 801 GGGCTTTTTC GGAGAAGTCG GCAGTACTGG
CGCGGCCTTT GCGTTTGCCG 851 ACGTAAACGG TAATGTCCAG CGACTTGTCC
TGCTGGAACT CGATTTGTTC 901 GATTTCGCCC AGCCGCACGC TGACGCTTTG
TCCCAATGA
This corresponds to the amino acid sequence <SEQ ID 1426; ORF
515-1>:
TABLE-US-01748 m515-1.pep 1 MVQIQVVRAA GVARGLHTEF ARAVTAEEIA
FDNAVLNHEA RCGGNAFRIK 51 IAAAERAGDV RFFAQVEEIG QDFFADAVDQ
ETALAVERAA GECADEVSDK 101 TARNGGIEED GVAACRDAAA AESAQSAAGG
GLTDGFGAVH IRMAAGGIVP 151 VVALHAVFVG GNDAAGNAVV RALPVCGKTV
GVAVNVLVMA GLHRRAFGVF 201 DALILVQGGL FALFCQADGG FRIQIPFVVK
VGVADVFCHQ TGIGKSGATV 251 FGGVAGDVDG GFDGVLQGFF GEVGSTGAAF
AFADVNGNVQ RLVLLELDLF 301 DFAQPHADAL SQ* m515-1/g515-1 91.7%
identity in 312 aa overlap 10 20 30 40 50 60 g515-1.pep
MVQIQVVRAAGVARGLHSEFARAVTAEEIAFDNAVLNHEARRGGNTFRIKIAAAERAGDV
|||||||||||||||||:||||||||||||||||||||||| |||:|||||||||||||| m515-1
MVQIQVVRAAGVARGLHTEFARAVTAEEIAFDNAVLNHEARCGGNAFRIKIAAAERAGDV 10 20
30 40 50 60 70 80 90 100 110 120 g515-1.pep
RFFAQVEEIGQDFFADAVDQETALAVERAAGECADEVSDQPARNGGIEEDGVAACRDAAA
|||||||||||||||||||||||||||||||||||||||: ||||||||||||||||||| m515-1
RFFAQVEEIGQDFFADAVDQETALAVERAAGECADEVSDKTARNGGIEEDGVAACRDAAA 70 80
90 100 110 120 130 140 150 160 170 180 g515-1.pep
AESAQSAAGGGLTDGFGAVHIRMAAGGIVPVVALHSVFVGGNDAAGNAVVRALPVCGKTV
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| m515-1
AESAQSAAGGGLTDGFGAVHIRMAAGGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTV 130
140 150 160 170 180 190 200 210 220 230 240 g515-1.pep
GVAVNVLVVSGLHRRAFGVFDAAVRVQRCLFALFCQADGGFRIQIPFVVKVGVADVLRHQ
||||||||::|||||||||||| : || |||||||||||||||||||||||||||: || m515-1
GVAVNVLVMAGLHRRAFGVFDALILVQGGLFALFCQADGGFRIQIPFVVKVGVADVFCHQ 190
200 210 220 230 240 250 260 270 280 290 300 g515-1.pep
LGVGKSGATVFGGVAGDVGGGADGVAQGLFGEVGGAGAAFAFADVNGNVQRFVLLELDLF
|:||||||||||||||| || ||| ||:|||||::|||||||||||||||:|||||||| m515-1
TGIGKSGATVFGGVAGDVDGGFDGVLQGFFGEVGSTGAAFAFADVNGNVQRLVLLELDLF 250
260 270 280 290 300 310 320 330 340 350 360 g515-1.pep
DFAQAHADALSERFAEVGFGGGRARCFCQVERAAAEVEEFGSGVVEQHNNLSWWSVVAFX ||||
||||||: m515-1 DFAQPHADALSQX 310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1427>:
TABLE-US-01749 a515-1.seq 1 ATGGTTCAAA TAAAGGTTGT GCGCGCCGCC
GGCGTTGCCC GTGGTCTGCA 51 TTCCGAGTTT GCGCGCGCTG TAACTGCTGA
GGAAATAGCC TTCGACAATG 101 CCGTTTTGAA TCACGAAGCG CGGTGCGGTG
GCAACGCCTT CCGCATCAAA 151 ATAGCTGCTG CGGAAAGAGC GGGGGATGTG
CGGTTCTTCG CGCAGGTTGA 201 GGAAATCGGG CAGGACTTTT TTGCCGATGC
TGTCGATCAG GAAACTGCTT 251 TGGCGGTAGA GCGCTCCGCC GGAGAGTGCG
CCGACGAGGT GTCCGATAAG 301 ACCGCCCGAA ACGGTGGTAT CGAAGAGGAC
GGGGTAGTTG CCTGTCGGGA 351 TGCTGCGGCT GCCGAGTCGG CGCAAAGTGC
GGCGGGCGGC GGTTTGACCG 401 ATGGTTTCGG GGCTGTCCAT ATCCGGATGG
CGGCAGGCGG AATCGTACCA 451 GTAGTCGCGC TGCATGCCGT TTTCGTCGGC
GGCAACGACG CTGCAGGAAA 501 TGCTGTGGTG CGTGCTTTGC CGGTGTGCGG
CAAAACCGTA GGTGTTGCCG 551 TAAACGTATT GGTAATGGCC GGTTTGCACC
GCCGCGCCTT CGGAGTTTTC 601 GATGCGCTCA TCCTCGTTCA GGGCGGCTTG
TTCGCATTGT TTTGCCAAGC 651 CGACGGCGGC TTCCGTATCC AAATCCCATT
CGTGGTAAAG GTCGGGGTCG 701 CCGATGTGTT GCGCCATCAA CTCGGGGTCG
GCAAGTCCGG CGCAACCGTC 751 TTCGGCGGTG TGGCGGGCGA TGTCGGCGGC
GGCGCGGACG GTGTCGCGCA 801 GGGCTTGTTC GGAGAAATCG GCGGTGCCGG
CGCGGCCTTT GCGTTTGCCG 851 ACGTAAACGG TAATGTCCAG CGACTTGTCC
TGCTGAAACT CGATTTGTTC 901 GATTTCGCCC AGCCGCACGC TGACGCTTTG
TCCCAATGA
This corresponds to the amino acid sequence <SEQ ID 1428; ORF
515-1.a>:
TABLE-US-01750 a515-1.pep 1 MVQIKVVRAA GVARGLHSEF ARAVTAEEIA
FDNAVLNHEA RCGGNAFRIK 51 IAAAERAGDV RFFAQVEEIG QDFFADAVDQ
ETALAVERSA GECADEVSDK 101 TARNGGIEED GVVACRDAAA AESAQSAAGG
GLTDGFGAVH IRMAAGGIVP 151 VVALHAVFVG GNDAAGNAVV RALPVCGKTV
GVAVNVLVMA GLHRRAFGVF 201 DALILVQGGL FALFCQADGG FRIQIPFVVK
VGVADVLRHQ LGVGKSGATV 251 FGGVAGDVGG GADGVAQGLF GEIGGAGAAF
AFADVNGNVQ RLVLLKLDLF 301 DFAQPHADAL SQ* m515-1/a515-1 94.9%
identity in 312 aa overlap 10 20 30 40 50 60 a515-1.pep
MVQIKVVRAAGVARGLHSEFARAVTAEEIAFDNAVLNHEARCGGNAFRIKIAAAERAGDV
||||:||||||||||||:|||||||||||||||||||||||||||||||||||||||||| m515-1
MVQIQVVRAAGVARGLHTEFARAVTAEEIAFDNAVLNHEARCGGNAFRIKIAAAERAGDV 10 20
30 40 50 60 70 80 90 100 110 120 a515-1.pep
RFFAQVEEIGQDFFADAVDQETALAVERSAGECADEVSDKTARNGGIEEDGVVACRDAAA
||||||||||||||||||||||||||||:|||||||||||||||||||||||:||||||| m515-1
RFFAQVEEIGQDFFADAVDQETALAVERAAGECADEVSDKTARNGGIEEDGVAACRDAAA 70 80
90 100 110 120 130 140 150 160 170 180 a515-1.pep
AESAQSAAGGGLTDGFGAVHIRMAAGGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m515-1
AESAQSAAGGGLTDGFGAVHIRMAAGGIVPVVALHAVFVGGNDAAGNAVVRALPVCGKTV 130
140 150 160 170 180 190 200 210 220 230 240 a515-1.pep
GVAVNVLVMAGLHRRAFGVFDALILVQGGLFALFCQADGGFRIQIPFVVKVGVADVLRHQ
||||||||||||||||||||||||||||||||||||||||||||||||||||||||: || m515-1
GVAVNVLVMAGLHRRAFGVFDALILVQGGLFALFCQADGGFRIQIPFVVKVGVADVFCHQ 190
200 210 220 230 240 250 260 270 280 290 300 a515-1.pep
LGVGKSGATVFGGVAGDVGGGADGVAQGLFGEIGGAGAAFAFADVNGNVQRLVLLKLDLF
|:||||||||||||||| || ||| ||:|||:|::|||||||||||||||||||:|||| m515-1
TGIGKSGATVFGGVAGDVDGGFDGVLQGFFGEVGSTGAAFAFADVNGNVQRLVLLELDLF 250
260 270 280 290 300 310 a515-1.pep DFAQPHADALSQX |||||||||||||
m515-1 DFAQPHADALSQX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1429>:
TABLE-US-01751 g516.seq 1 atgttgttcc gtaaaacgac cgccgccgtt
ttggcggcaa ccttgatact 51 gaacggctgt acgatgatgt tgcgggggat
gaacaacccg gtcagccaaa 101 caatcacccg caaacacgtt gacaaagacc
aaatccgcgc cttcggtgtg 151 gttgccgaag acaatgccca attggaaaag
ggcagcctgg tgatgatggg 201 cgggaaatac tggttcgccg tcaatcccga
agattcggcg aagctgacgg 251 gccttttgaa ggccgggttg gacaagccct
tccaaatagt tgaggatacc 301 ccgagctatg cccgccacca agccctgccg
gtcaaattcg aagcgcccgg 351 cagccagaat ttcagtaccg gaggtctttg
cctgcgctat gataccggca 401 gacctgacga catcgccaag ctgaaacagc
ttgagtttaa agcggtcaaa 451 ctcgacaatc ggaccattta cacgcgctgc
gtatccgcca aaggcaaata 501 ctacgccacg ccgcaaaaac tgaacgccga
ttatcatttt gagcaaagtg 551 tgcccgccga tatttattat acggttactg
aaaaacatac cgacaaatcc 601 aagctgtttg gaaatatctt atatacgccc
cccttgttga tattggatgc 651 ggcggccgcg gtgctggtct tgcctatggc
tctgattgca gccgcgaatt 701 cctcagacaa atga
This corresponds to the amino acid sequence <SEQ ID 1430; ORF
516.ng>:
TABLE-US-01752 g516.pep 1 MLFRKTTAAV LAATLILNGC TMMLRGMNNP
VSQTITRKHV DKDQIRAFGV 51 VAEDNAQLEK GSLVMMGGKY WFAVNPEDSA
KLTGLLKAGL DKPFQIVEDT 101 PSYARHQALP VKFEAPGSQN FSTGGLCLRY
DTGRPDDIAK LKQLEFKAVK 151 LDNRTIYTRC VSAKGKYYAT PQKLNADYHF
EQSVPADIYY TVTEKHTDKS 201 KLFGNILYTP PLLILDAAAA VLVLPMALIA
AANSSDK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1431>:
TABLE-US-01753 m516.seq 1 ATGTTGTTCC GTAAAACGAC CGCCGCCGTT
TTGGCGGCAA CCTTGATGCT 51 GAACGGCTGT ACGTTGATGT TGTGGGGAAT
GAACAACCCG GTCAGCGAAA 101 CAATCACCCG CAAACACGTT GACAAAGACC
AAATCCGCGC CTTCGGTGTG 151 GTTGCCGAAG ACAATGCCCA ATTGGAAAAG
GGCAGCCTGG TGATGATGGG 201 CGGAAAATAC TGGTTCGTCG TCAATCCCGA
AGATTCGGCG AAGCTGACGG 251 GCATTTTGAA GGCAGGGCTG GACAAACCCT
TCCAAATAGT TGAGGATACC 301 CCGAGCTATG CTCGCCACCA AGCCCTGCCG
GTCAAACTCG AATCGCCTGG 351 CAGCCAGAAT TTCAGTACCG AAGGCCTTTG
CCTGCGCTAC GATACCGACA 401 AGCCTGCCGA CATCGCCAAG CTGAAACAGC
TCGGGTTTGA AGCGGTCAAA 451 CTCGACAATC GGACCATTTA CACGCGCTGC
GTATCCGCCA AAGGCAAATA 501 CTACGCCACA CCGCAAAAAC TGAACGCCGA
TTACCATTTT GAGCAAAGTG 551 TGCCTGCCGA TATTTATTAC ACGGTTACTG
AAGAACATAC CGACAAATCC 601 AAGCTGTTTG CAAATATCTT ATATACGCCC
CCCTTTTTGA TACTGGATGC 651 GGCGGGCGCG GTACTGGCCT TGCCTGCGGC
GGCTCTGGGT GCGGTCGTGG 701 ATGCCGCCCG CAAATGA
This corresponds to the amino acid sequence <SEQ ID 1432; ORF
516>:
TABLE-US-01754 m516.pep 1 MLFRKTTAAV LAATLMLNGC TLMLWGMNNP
VSETITRKHV DKDQIRAFGV 51 VAEDNAQLEK GSLVMMGGKY WFVVNPEDSA
KLTGILKAGL DKPFQIVEDT 101 PSYARHQALP VKLESPGSQN FSTEGLCLRY
DTDKPADIAK LKQLGFEAVK 151 LDNRTIYTRC VSAKGKYYAT PQKLNADYHF
EQSVPADIYY TVTEEHTDKS 201 KLFANILYTP PFLILDAAGA VLALPAAALG
AVVDAARK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 516
shows 90.0% identity over a 231 aa overlap with a predicted ORF
(ORF 516.ng) from N. gonorrhoeae:
TABLE-US-01755 m516/g516 10 20 30 40 50 60 m516.pep
MLFRKTTAAVLAATLMLNGCTLMLWGMNNPVSETITRKHVDKDQIRAFGVVAEDNAQLEK
|||||||||||||||:|||||:|| |||||||:||||||||||||||||||||||||||| g516
MLFRKTTAAVLAATLILNGCTMMLRGMNNPVSQTITRKHVDKDQIRAFGVVAEDNAQLEK 10 20
30 40 50 60 70 80 90 100 110 120 m516.pep
GSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPSYARHQALPVKLESPGSQN
||||||||||||:|||||||||||:|||||||||||||||||||||||||||:|:||||| g516
GSLVMMGGKYWFAVNPEDSAKLTGLLKAGLDKPFQIVEDTPSYARHQALPVKFEAPGSQN 70 80
90 100 110 120 130 140 150 160 170 180 m516.pep
FSTEGLCLRYDTDKPADIAKLKQLGFEAVKLDNRTIYTRCVSAKGKYYATPQKLNADYHF |||
|||||||| :| |||||||| |:||||||||||||||||||||||||||||||||| g516
FSTGGLCLRYDTGRPDDIAKLKQLEFKAVKLDNRTIYTRCVSAKGKYYATPQKLNADYHF 130
140 150 160 170 180 190 200 210 220 230 239 m516.pep
EQSVPADIYYTVTEEHTDKSKLFANILYTPPFLILDAAGAVLALPAAALGAVVDAARK
||||||||||||||:||||||||:|||||||:||||||:|||:|| | ::|: g516
EQSVPADIYYTVTEKHTDKSKLFGNILYTPPLLILDAAAAVLVLPMALIAAANSSDK 190 200
210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1433>:
TABLE-US-01756 a516.seq 1 ATGTTGTTCC GTAAAACGAC CGCCGCCGTT
TTGGCGGCAA CCTTGATGTT 51 GAACGGCTGT ACGGTAATGA TGTGGGGTAT
GAACAGCCCG TTCAGCGAAA 101 CGACCGCCCG CAAACACGTT GACAAGGACC
AAATCCGCGC CTTCGGTGTG 151 GTTGCCGAAG ACAATGCCCA ATTGGAAAAG
GGCAGCCTGG TGATGATGGG 201 CGGGAAATAC TGGTTCGTCG TCAATCCTGA
AGATTCGGCG AAGCTGACGG 251 GCATTTTGAA GGCCGGGTTG GACAAGCAGT
TTCAAATGGT TGAGCCCAAC 301 CCGCGCTTTG CCTACCAAGC CCTGCCGGTC
AAACTCGAAT CGCCCGCCAG 351 CCAGAATTTC AGTACCGAAG GCCTTTGCCT
GCGCTACGAT ACCGACAGAC 401 CTGCCGACAT CGCCAAGCTG AAACAGCTTG
AGTTTGAAGC GGTCGAACTC 451 GACAATCGGA CCATTTACAC GCGCTGCGTC
TCCGCCAAAG GCAAATACTA 501 CGCCACACCG CAAAAACTGA ACGCCGATTA
TCATTTTGAG CAAAGTGTGC 551 CTGCCGATAT TTATTACACG GTTACGAAAA
AACATACCGA CAAATCCAAG 601 TTGTTTGAAA ATATTGCATA TACGCCCACC
ACGTTGATAC TGGATGCGGT 651 GGGCGCGGTG CTGGCCTTGC CTGTCGCGGC
GTTGATTGCA GCCACGAATT 701 CCTCAGACAA ATGA
This corresponds to the amino acid sequence <SEQ ID 1434; ORF
516.a>:
TABLE-US-01757 a516.pep 1 MLFRKTTAAV LAATLMLNGC TVMMWGMNSP
FSETTARKHV DKDQIRAFGV 51 VAEDNAQLEK GSLVMMGGKY WFVVNPEDSA
KLTGILKAGL DKQFQMVEPN 101 PRFAYQALPV KLESPASQNF STEGLCLRYD
TDRPADIAKL KQLEFEAVEL 151 DNRTIYTRCV SAKGKYYATP QKLNADYHFE
QSVPADIYYT VTKKHTDKSK 201 LFENIAYTPT TLILDAVGAV LALPVAALIA ATNSSDK*
m516/a516 86.1% identity in 238 aa overlap 10 20 30 40 50 60
m516.pep
MLFRKTTAAVLAATLMLNGCTLMLWGMNNPVSETITRKHVDKDQIRAFGVVAEDNAQLEK
|||||||||||||||||||||:|:||||:| ||| :|||||||||||||||||||||||| a516
MLFRKTTAAVLAATLMLNGCTVMMWGMNSPFSETTARKHVDKDQIRAFGVVAEDNAQLEK 10 20
30 40 50 60 70 80 90 100 110 120 m516.pep
GSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPSYARHQALPVKLESPGSQN
|||||||||||||||||||||||||||||||| ||:|| :| :| :||||||||||:||| a516
GSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKQFQMVEPNPRFA-YQALPVKLESPASQN 70 80
90 100 110 130 140 150 160 170 180 m516.pep
FSTEGLCLRYDTDKPADIAKLKQLGFEAVKLDNRTIYTRCVSAKGKYYATPQKLNADYHF
|||||||||||||:|||||||||| ||||:|||||||||||||||||||||||||||||| a516
FSTEGLCLRYDTDRPADIAKLKQLEFEAVELDNRTIYTRCVSAKGKYYATPQKLNADYHF 120
130 140 150 160 170 190 200 210 220 230 239 m516.pep
EQSVPADIYYTVTEEHTDKSKLFANILYTPPFLILDAAGAVLALPAAALGAVVDAARKX
|||||||||||||::|||||||| || ||| |||||:|||||||:||| |::::: || a516
EQSVPADIYYTVTKKHTDKSKLFENIAYTPTTLILDAVGAVLALPVAALIAATNSSDKX 180 190
200 210 220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1435>:
TABLE-US-01758 g517.seq 1 atgcatcggg tttcagacgg cattggagtg
tcagtcgtgt tctgccgatt 51 cgtaggcttc gacgattttt tgcaccagag
gatgccggac aacgtcttcg 101 ccggtgaagg tatggaaata cagtcctgcc
acgccgtgca gtttctcacg 151 tgcgtctttc aatcccgatt tgatgttttt
gggcaggtcg atttggctgg 201 tgtcgccggt aatgacggct ttcgcgccga
agccgatgcg ggtcaggaac 251 attttcattt gttcgggcgt ggtgttttgc
gcttcgtcga ggatgatgta 301 tgcgccgttg agcgtcctgc cgcgcatata
ggcgagcggg gcgatttcaa 351 tcaggccttt ttcaatcagc ttggttacac
ggtcaaagcc catcaggtca 401 tagagggcat cataaagcgg acggaggtag
gggtcgactt tttgggtcag 451 gtctccgggc aggaagccca gtttctcacc
ggcttcgacg gcaggccgaa 501 ctaa
This corresponds to the amino acid sequence <SEQ ID 1436; ORF
517.ng>:
TABLE-US-01759 g517.pep 1 MHRVSDGIGV SVVFCRFVGF DDFLHQRMPD
NVFAGEGMEI QSCHAVQFLT 51 CVFQSRFDVF GQVDLAGVAG NDGFRAEADA
GQEHFHLFGR GVLRFVEDDV 101 CAVERPAAHI GERGDFNQAF FNQLGYTVKA
HQVIEGIIKR TEVGVDFLGQ 151 VSGQEAQFLT GFDGRPN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1437>:
TABLE-US-01760 m517.seq 1 ATGCATCGGG TTTCAGACGG CATTGGAATG
TCAGTCGTGT TCTGCCGATT 51 CGTAGGCTTC GACGATTTTT TGCACCAAAG
GATGCCGGAC AACGTCTTCG 101 CCGGTAAAGG TGTGGAAATA CAGCCCTTCC
ACGTTGTGCA GTTTCTCACG 151 CGCATCTTTT AATCCCGATT TGATGTTTTT
GGGCAGGTCG ATTTGGCTGG 201 TGTCGCCGGT AATGACGGCT TTCGCGCCGA
AGCCGATGCG GGTCAGGAAC 251 ATTTTCATTT GTTCGGGCGT GGTGTTTTGC
GCTTCGTCGA GGATGATGTA 301 TGCGCCGTTG AGCGTCCTGC CGCGCATATA
GGCGAGCGGG GCGATTTCAA 351 TCAGGCCTTT TTCAATCAGC TTGGTTACAC
GGTCAAAGCC CATCAGGTCA 401 TAGAGGGCAT CATAAAGCGG ACGAAGGTAG
GGATCGACTT TCTGGGTCAG 451 GTCTCCGGGC AGGAAGCCCA GTTTCTCGCC
GGCTTCGACG GCTGgGCGCA 501 CTAA
This corresponds to the amino acid sequence <SEQ ID 1438; ORF
517>:
TABLE-US-01761 m517.pep 1 MHRVSDGIGM SVVFCRFVGF DDFLHQRMPD
NVFAGKGVEI QPFHVVQFLT 51 RIFXSRFDVF GQVDLAGVAG NDGFRAEADA
GQEHFHLFGR GVLRFVEDDV 101 CAVERPAAHI GERGDFNQAF FNQLGYTVKA
HQVIEGIIKR TKVGIDFLGQ 151 VSGQEAQFLA GFDGWAH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 517
shows 92.7% identity over a 164 aa overlap with a predicted ORF
(ORF 517.ng) from N. gonorrhoeae:
TABLE-US-01762 m517/g517 10 20 30 40 50 60 m517.pep
MHRVSDGIGMSVVFCRFVGFDDFLHQRMPDNVFAGKGVEIQPFHVVQFLTRIFXSRFDVF
|||||||||:|||||||||||||||||||||||||:|:||| |:||||| :| |||||| g517
MHRVSDGIGVSVVFCRFVGFDDFLHQRMPDNVFAGEGMEIQSCHAVQFLTCVFQSRFDVF 10 20
30 40 50 60 70 80 90 100 110 120 m517.pep
GQVDLAGVAGNDGFRAEADAGQEHFHLFGRGVLRFVEDDVCAVERPAAHIGERGDFNQAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g517
GQVDLAGVAGNDGFRAEADAGQEHFHLFGRGVLRFVEDDVCAVERPAAHIGERGDFNQAF 70 80
90 100 110 120 130 140 150 160 m517.pep
FNQLGYTVKAHQVIEGIIKRTKVGIDFLGQVSGQEAQFLAGFDGWAH
|||||||||||||||||||||:||:||||||||||||||:|||| g517
FNQLGYTVKAHQVIEGIIKRTEVGVDFLGQVSGQEAQFLIGFDGRPN 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1439>:
TABLE-US-01763 a517.seq 1 ATGCATCGGG TTTCAGACGG CATTGGAATG
TCAGTCGTGT TCTGCCGATT 51 CGTAGGCTTC GACGATTTTT TGCACCAAAG
GATGCCGGAC AACGTCTTCG 101 CCGGTAAAGG TGTGGAAATA CAGCCCTTCC
ACGCCGTGCA GTTTCTCACG 151 CGCATCTTTT AATCCCGATT TGATGTTTTT
GGGCAGGTCG ATTTGGCTGG 201 TGTCGCCGGT AATGACGGCT TTCGCGCCGA
AGCCGATGCG GGTCAGGAAC 251 ATTTTCATTT GTTCGGGCGT GGTGTTTTGC
GCTTCGTCGA GGATGATGTA 301 TGCGCCGTTG AGCGTCCTGC CGCGCATATA
GGCGAGCGGG GCAATCTCAA 351 TCAGACCTTT TTCAATCAGC TTGGTGACAC
GGTCGAAGCC CATCAGGTCA 401 TAGAGGGCAT CATAAAGCGG ACGAAGGTAG
GGATCGACTT TCTGGGTCAG 451 GTCACCGGGC AGAAAACCCA GTTTCTCGCC
GGCTTCGACG GCAGGCCGCA 501 CTAA
This corresponds to the amino acid sequence <SEQ ID 1440; ORF
517.a>:
TABLE-US-01764 a517.pep 1 MHRVSDGIGM SVVFCRFVGF DDFLHQRMPD
NVFAGKGVEI QPFHAVQFLT 51 RIF*SRFDVF GQVDLAGVAG NDGFRAEADA
GQEHFHLFGR GVLRFVEDDV 101 CAVERPAAHI GERGNLNQTF FNQLGDTVEA
HQVIEGIIKR TKVGIDFLGQ 151 VTGQKTQFLA GFDGRPH* m517/a517 93.4%
identity in 167 aa overlap 10 20 30 40 50 60 m517.pep
MHRVSDGIGMSVVFCRFVGFDDFLHQRMPDNVFAGKGVEIQPFHVVQFLTRIFXSRFDVF
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| a517
MHRVSDGIGMSVVFCRFVGFDDFLHQRMPDNVFAGKGVEIQPFHAVQFLTRIFXSRFDVF 10 20
30 40 50 60 70 80 90 100 110 120 m517.pep
GQVDLAGVAGNDGFRAEADAGQEHFHLFGRGVLRFVEDDVCAVERPAAHIGERGDFNQAF
||||||||||||||||||||||||||||||||||||||||||||||||||||||::||:| a517
GQVDLAGVAGNDGFRAEADAGQEHFHLFGRGVLRFVEDDVCAVERPAAHIGERGNLNQTF 70 80
90 100 110 120 130 140 150 160 m517.pep
FNQLGYTVKAHQVIEGIIKRTKVGIDFLGQVSGQEAQFLAGFDGWAHX |||||
||:||||||||||||||||||||||:||::|||||||| || a517
FNQLGDTVEAHQVIEGIIKRTKVGIDFLGQVTGQKTQFLAGFDGRPHX 130 140 150
160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1441>:
TABLE-US-01765 g518.seq 1 atgacgtttt cggcggcaaa gctcaacatt
tcggcactga tgttgtgtct 51 ttcggcagga atgaccgttt tactttccgc
ttttttactg ctccgaccgg 101 aaggcagcat cttattcaac cattttttca
gcataaatat tctgacccga 151 agagcggcat ctccacgggc aaccgtgttc
agactgcatc aggcggtacg 201 attccacaag atgccgaaaa ccataagcaa
aatgcgtaga aactacgccg 251 tccgaatcac gccgcctcct cgggcggcaa
cgcttcatta taacagattg 301 ccccttaaaa aatcagaccc tgcttttgtg
gcggagtctg aaatttga
This corresponds to the amino acid sequence <SEQ ID 1442; ORF
518.ng>:
TABLE-US-01766 g518.pep 1 MTFSAAKLNI SALMLCLSAG MTVLLSAFLL
LRPEGSILFN HFFSINILTR 51 RAASPRATVF RLHQAVRFHK MPKTISKMRR
NYAVRITPPP RAATLHYNRL 101 PLKKSDPAFV AESEI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1443>:
TABLE-US-01767 m518.seq 1 ATGACGTTTT CGGCGGCAAA GCTCAACATT
TCGGCACGGA TGTTGTGTCT 51 TTCGGCAGGA ATGACCGTTT TACTTTCCGC
TTTTTTACTG CTCCGACCGG 101 AAGGCAGCAT CTTATTCAAC CATTTTTTCA
GCATAAATAT TCTGACCCGA 151 AGAGCGGCAT CTCCACAGGC AACCGTGTTC
AGACGGCATC AGGCGCGGTT 201 TGCAAGATGC CGTACCATAA ACAAAAGGCG
TAGAAACTAC GCCGTCCGAA 251 TCACGCCGCC CTCGCG.GCG GCAACGCGTC
ATTATAACAG ATTGCCCTCC 301 GCGGCAGGCT TAGTGCGGCG GGAGCGCCGC
CGTTGCGCAG TAATATTGTC 351 TAACGGGAGG AAAAAATCAG ACCCTGCTTT
TGTGGCAGAG TCTGAAATTT 401 GA
This corresponds to the amino acid sequence <SEQ ID 1444; ORF
518>:
TABLE-US-01768 m518.pep 1 MTFSAAKLNI SARMLCLSAG MTVLLSAFLL
LRPEGSILFN HFFSINILTR 51 RAASPQATVF RRHQARFARC RTINKRRRNY
AVRITPPSXA ATRHYNRLPS 101 AAGLVRRERR RCAVILSNGR KKSDPAFVAE SEI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 518
shows 74.1% identity over a 135 aa overlap with a predicted ORF
(ORF 518.ng) from N. gonorrhoeae:
TABLE-US-01769 m518/g518 m518.pep
MTFSAAKLNISARMLCLSAGMTVLLSAFLLLRPEGSILFNHFFSINILTRRAASPQATVF
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||:|||| g518
MTFSAAKLNISALMLCLSAGMTVLLSAFLLLRPEGSILFNHFFSINILTRRAASPRATVF 10 20
30 40 50 60 70 80 90 100 110 m518.pep
RRHQA-RFARC-RTINKRRRNYAVRITPPSXAATRHYNRLPSAAGLVRRERRRCAVILSN | |||
|| : :||:| ||||||||||| ||| |||||| g518
RLHQAVRFHKMPKTISKMRRNYAVRITPPPRAATLHYNRLPL------------------ 70 80
90 100 120 130 m518.pep GRKKSDPAFVAESEI ||||||||||||| g518
--KKSDPAFVAESEI 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1445>:
TABLE-US-01770 a518.seq 1 ATGACGTTTT CGGCGGCAAA GCTCAACATT
TCGGCACGGA TGTTGTGTCT 51 TTCGGCAGGA ATGACCGTTT TACTTTCCGC
TTTTTTACTG CTCCGACCGG 101 AAGGCAGCAT CTTATTCAAC CATTTTTTCA
GCATAAATAT TCTAACCCGA 151 AGAGCGGCAT CTCCACGGGC AACCGTGTTC
AGACGGCATC AGGCGGTACG 201 ATTCCGCAAG ATGCCGACCA TAAACAAAAG
GCGTAGAAAC TACGCCGTCC 251 GAATCACGCC GTCCTCG.CG GCGGCAACGC
GTCATTATAA CAGATTGCCC 301 TCC....... .......... ..........
.......... .......... 351 .......... ...AAAAAAT CAGACCCTGC
TTTTGTGGCA GAGTCTGAAA 401 TTTGA
This corresponds to the amino acid sequence <SEQ ID 1446; ORF
518.a>:
TABLE-US-01771 a518.pep 1 MTFSAAKLNI SARMLCLSAG MTVLLSAFLL
LRPEGSILFN HFFSINILTR 51 RAASPRATVF RRHQAVRFRK MPTINKRRRN
YAVRITPSSX AATRHYNRLP 101 S......... .......... .KKSDPAFVA ESEI*
m518/a518 79.9% identity in 134 aa overlap 10 20 30 40 50 60
m518.pep
MTFSAAKLNISARMLCLSAGMTVLLSAFLLLRPEGSILFNHFFSINILTRRAASPQATVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a518
MTFSAAKLNISARMLCLSAGMTVLLSAFLLLRPEGSILFNHFFSINILTRRAASPRATVF 10 20
30 40 50 60 70 80 90 100 110 119 m518.pep
RRHQA-RFARCRTINKRRRNYAVRITPPSXAATRHYNRLPSAAGLVRRERRRCAVILSNG |||||
|| : ||||||||||||||| ||||||||||||| a518
RRHQAVRFRKMPTINKRRRNYAVRITPSSXAATRHYNRLPS------------------- 70 80
90 100 120 130 m518.pep RKKSDPAFVAESEIX |||||||||||||| a518
-KKSDPAFVAESEIX 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1447>:
TABLE-US-01772 g519.seq 1 atggaatttt tcattatctt gttggcagcc
gtcgccgttt tcggcttcaa 51 atcctttgtc gtcatccccc agcaggaagt
ccacgttgtc gaaaggctcg 101 ggcgtttcca tcgcgccctg acggccggtt
tgaatatttt gattcccttt 151 atcgaccgcg tcgcctaccg ccattcgctg
aaagaaatcc ctttagacgt 201 acccagccag gtctgcatca cgcgcgataa
tacgcaattg actgttgacg 251 gcatcatcta tttccaagta accgatccca
aactcgcctc atacggttcg 301 agcaactaca ttatggcaat tacccagctt
gcccaaacga cgctgcgttc 351 cgttatcggg cgtatggagt tggacaaaac
gtttgaagaa cgcgacgaaa 401 tcaacagtac cgtcgtctcc gccctcgatg
aagccgccgg ggcttggggt 451 gtgaaagtcc tccgttacga aatcaaggat
ttggttccgc cgcaagaaat 501 ccttcgcgca atgcaggcac aaattaccgc
cgaacgcgaa aaacgcgccc 551 gtattgccga atccgaaggc cgtaaaatcg
aacaaatcaa ccttgccagt 601 ggtcagcgtg aagccgaaat ccaacaatcc
gaaggcgagg ctcaggctgc 651 ggtcaatgcg tccaatgccg agaaaatcgc
ccgcatcaac cgcgccaaag 701 gcgaagcgga atccctgcgc cttgttgccg
aagccaatgc cgaagccaac 751 cgtcaaattg ccgccgccct tcaaacccaa
agcggggcgg atgcggtcaa 801 tctgaagatt gcgggacaat acgttaccgc
gttcaaaaat cttgccaaag 851 aagacaatac gcggattaag cccgccaagg
ttgccgaaat cgggaaccct 901 aattttcggc ggcatgaaaa attttcgcca
gaagcaaaaa cggccaaata 951 a
This corresponds to the amino acid sequence <SEQ ID 1448; ORF
519.ng>:
TABLE-US-01773 g519.pep 1 MEFFIILLAA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRA MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAN 251 RQIAAALQTQ SGADAVNLKI AGQYVTAFKN
LAKEDNTRIK PAKVAEIGNP 301 NFRRHEKFSP EAKTAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1449>:
TABLE-US-01774 m519.seq (partial) 1 ..TCCGTTATCG GGCGTATGGA
GTTGGACAAA ACGTTTGAAG AACGCGACGA 51 AATCAACAGT ACTGTTGTTG
CGGCTTTGGA CGAGGCGGCC GGGgCTTgGG 101 GTGTGAAGGT TTTGCGTTAT
GAGATTAAAG ACTTGGTTCC GCCGCAAGAA 151 ATCCTTCGCT CAATGCAGGC
GCAAATTACT GCCGAACGCG AAAAACGCGC 201 CCGTATCGCC GAATCCGAAG
GTCGTAAAAT CGAACAAATC AACCTTGCCA 251 GTGGTCAGCG CGAAGCCGAA
ATCCAACAAT CCGAAGGCGA GGCTCAGGCT 301 GCGGTCAATG CGTCAAATGC
CGAGAAAATC GCCCGCATCA ACCGCGCCAA 351 AGGTGAAGCG GAATCCTTGC
GCCTTGTTGC CGAAGCCAAT GCCGAAGCCA 401 TCCGTCAAAT TGCCGCCGCC
CTTCAAACCC AAGGCGGTGC GGATGCGGTC 451 AATCTGAAGA TTGCGGAACA
ATACGTCGCT GCGTTCAACA ATCTTGCCAA 501 AGAAAGCAAT ACGCTGATTA
TGCCCGCCAA TGTTGCCGAC ATCGGCAGCC 551 TGATTTCTGC CGGTATGAAA
ATTATCGACA GCAGCAAAAC CGCCAAaTAA
This corresponds to the amino acid sequence <SEQ ID 1450; ORF
519>:
TABLE-US-01775 m519.pep (partial) 1 ..SVIGRMELDK TFEERDEINS
TVVAALDEAA GAWGVKVLRY EIKDLVPPQE 51 ILRSMQAQIT AEREKRARIA
ESEGRKIEQI NLASGQREAE IQQSEGEAQA 101 AVNASNAEKI ARINRAKGEA
ESLRLVAEAN AEAIRQIAAA LQTQGGADAV 151 NLKIAEQYVA AFNNLAKESN
TLIMPANVAD IGSLISAGMK IIDSSKTAK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 519
shows 87.5% identity over a 200 aa overlap with a predicted ORF
(ORF 519.ng) from N. gonorrhoeae:
TABLE-US-01776 m519/g519 10 20 30 m519.pep
SVIGRMELDKTFEERDEINSTVVAALDEAA |||||||||||||||||||||||:|||||| g519
YFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAA 90 100
110 120 130 140 40 50 60 70 80 90 m519.pep
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| g519
GAWGVKVLRYEIKDLVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLASGQREAE 150
160 170 180 190 200 100 110 120 130 140 150 m519.pep
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV
||||||||||||||||||||||||||||||||||||||||||| ||||||||||:||||| g519
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEANRQIAAALQTQSGADAV 210
220 230 240 250 260 160 170 180 190 200 m519.pep
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL-ISAGMKIIDSSKTAK |||||
|||:||:|||||:|| | ||:||:||: : |: :|||| g519
NLKIAGQYVTAFKNLAKEDNTRIKPAKVAEIGNPNFRRHEKFSPEAKTAK 270 280 290 300
310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1451>:
TABLE-US-01777 a519.seq 1 ATGGAATTTT TCATTATCTT GCTGGCAGCC
GTCGTTGTTT TCGGCTTCAA 51 ATCCTTTGTT GTCATCCCAC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GTATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAAT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGCAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG AGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
TGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 1452; ORF
519.a>:
TABLE-US-01778 a519.pep 1 MEFFIILLAA VVVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519/a519 99.5%
identity in 199 aa overlap 10 20 30 m519.pep
SVIGRMELDKTFEERDEINSTVVAALDEAA |||||||||||||||||||||||:|||||| a519
YFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAA 90 100
110 120 130 140 40 50 60 70 80 90 m519.pep
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a519
GAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAE 150
160 170 180 190 200 100 110 120 130 140 150 m519.pep
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a519
IQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAV 210
220 230 240 250 260 160 170 180 190 200 m519.pep
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAKX
|||||||||||||||||||||||||||||||||||||||||||||||||| a519
NLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAKX 270 280 290 300
310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1453>:
TABLE-US-01779 g519-1.seq 1 ATGGAATTTT TCATTATCTT GTTGGCAGCC
GTCGCCGTTT TCGGCTTCAA 51 ATCCTTTGTC GTCATCCCCC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGATAA
TACGCAATTG ACTGTTGACG 251 GCATCATCTA TTTCCAAGTA ACCGATCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCAAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAGT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGTAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG GGCTTGGGGT 451 GTGAAAGTCC TCCGTTACGA AATCAAGGAT
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCGCA ATGCAGGCAC AAATTACCGC
CGAACGCGAA AAACGCGCCC 551 GTATTGCCGA ATCCGAAGGC CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGTG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCCAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GCGAAGCGGA ATCCCTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGGGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTAGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GCATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 1454; ORF
519-1.ng>:
TABLE-US-01780 g519-1.pep 1 MEFFIILLAA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRA MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1455>:
TABLE-US-01781 m519-1.seq 1 ATGGAATTTT TCATTATCTT GTTGGTAGCC
GTCGCCGTTT TCGGTTTCAA 51 ATCCTTTGTT GTCATCCCAC AACAGGAAGT
CCACGTTGTC GAAAGGCTGG 101 GGCGTTTCCA TCGCGCCCTG ACGGcCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GCATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAGT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGTAC TGTTGTTGCG GCTTTGGACG
AGGCGGCCGG GGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
CGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCTGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 1456; ORF
519-1>:
TABLE-US-01782 m519-1. 1 MEFFIILLVA VAVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVA ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519-1/g519-1 99.0%
identity in 315 aa overlap 10 20 30 40 50 60 g519-1.pep
MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 10 20
30 40 50 60 70 80 90 100 110 120 g519-1.pep
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 70 80
90 100 110 120 130 140 150 160 170 180 g519-1.pep
RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRAMQAQITAERE
|||||||||||||||||||:|||||||||||||||||||||||||||||:|||||||||| m519-1
RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 130
140 150 160 170 180 190 200 210 220 230 240 g519-1.pep
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR 190
200 210 220 230 240 250 260 270 280 290 300 g519-1.pep
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL 250
260 270 280 290 300 310 g519-1.pep ISAGMKIIDSSKTAKX
|||||||||||||||| m519-1 ISAGMKIIDSSKTAKX 310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1457>:
TABLE-US-01783 a519-1.seq 1 ATGGAATTTT TCATTATCTT GCTGGCAGCC
GTCGTTGTTT TCGGCTTCAA 51 ATCCTTTGTT GTCATCCCAC AGCAGGAAGT
CCACGTTGTC GAAAGGCTCG 101 GGCGTTTCCA TCGCGCCCTG ACGGCCGGTT
TGAATATTTT GATTCCCTTT 151 ATCGACCGCG TCGCCTACCG CCATTCGCTG
AAAGAAATCC CTTTAGACGT 201 ACCCAGCCAG GTCTGCATCA CGCGCGACAA
TACGCAGCTG ACTGTTGACG 251 GTATCATCTA TTTCCAAGTA ACCGACCCCA
AACTCGCCTC ATACGGTTCG 301 AGCAACTACA TTATGGCGAT TACCCAGCTT
GCCCAAACGA CGCTGCGTTC 351 CGTTATCGGG CGTATGGAAT TGGACAAAAC
GTTTGAAGAA CGCGACGAAA 401 TCAACAGCAC CGTCGTCTCC GCCCTCGATG
AAGCCGCCGG AGCTTGGGGT 451 GTGAAGGTTT TGCGTTATGA GATTAAAGAC
TTGGTTCCGC CGCAAGAAAT 501 CCTTCGCTCA ATGCAGGCGC AAATTACTGC
TGAACGCGAA AAACGCGCCC 551 GTATCGCCGA ATCCGAAGGT CGTAAAATCG
AACAAATCAA CCTTGCCAGT 601 GGTCAGCGCG AAGCCGAAAT CCAACAATCC
GAAGGCGAGG CTCAGGCTGC 651 GGTCAATGCG TCAAATGCCG AGAAAATCGC
CCGCATCAAC CGCGCCAAAG 701 GTGAAGCGGA ATCCTTGCGC CTTGTTGCCG
AAGCCAATGC CGAAGCCATC 751 CGTCAAATTG CCGCCGCCCT TCAAACCCAA
GGCGGTGCGG ATGCGGTCAA 801 TCTGAAGATT GCGGAACAAT ACGTCGCCGC
GTTCAACAAT CTTGCCAAAG 851 AAAGCAATAC GCTGATTATG CCCGCCAATG
TTGCCGACAT CGGCAGCCTG 901 ATTTCTGCCG GTATGAAAAT TATCGACAGC
AGCAAAACCG CCAAATAA
This corresponds to the amino acid sequence <SEQ ID 1458; ORF
519-1.a>:
TABLE-US-01784 a519-1.pep. 1 MEFFIILLAA VVVFGFKSFV VIPQQEVHVV
ERLGRFHRAL TAGLNILIPF 51 IDRVAYRHSL KEIPLDVPSQ VCITRDNTQL
TVDGIIYFQV TDPKLASYGS 101 SNYIMAITQL AQTTLRSVIG RMELDKTFEE
RDEINSTVVS ALDEAAGAWG 151 VKVLRYEIKD LVPPQEILRS MQAQITAERE
KRARIAESEG RKIEQINLAS 201 GQREAEIQQS EGEAQAAVNA SNAEKIARIN
RAKGEAESLR LVAEANAEAI 251 RQIAAALQTQ GGADAVNLKI AEQYVAAFNN
LAKESNTLIM PANVADIGSL 301 ISAGMKIIDS SKTAK* m519-1/a519-1 99.0%
identity in 315 aa overlap 10 20 30 40 50 60 a519-1.pep
MEFFIILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL
||||||||:||:|||||||||||||||||||||||||||||||||||||||||||||||| m519-1
MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 10 20
30 40 50 60 70 80 90 100 110 120 a519-1.pep
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 70 80
90 100 110 120 130 140 150 160 170 180 a519-1.pep
RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| m519-1
RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 130
140 150 160 170 180 190 200 210 220 230 240 a519-1.pep
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
KRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLR 190
200 210 220 230 240 250 260 270 280 290 300 a519-1.pep
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m519-1
LVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSL 250
260 270 280 290 300 310 a519-1.pep ISAGMKIIDSSKTAKX
|||||||||||||||| m519-1 ISAGMKIIDSSKTAKX 310
Expression of ORF 519
[0330] The primer described in Table 1 for ORF 519 was used to
locate and clone ORF 519. ORF 519 was cloned in pET and pGex
vectors and expressed in E. coli as above described. The products
of protein expression and purification were analyzed by SDS-PAGE.
FIG. 4A shows the results of affinity purification, and FIG. 4B
shows the expression in E. coli. Purified Nis-fusion protein was
used to immunize mice whose sera were used for ELISA (positive
result), FACS analysis (FIG. 4C), western blot (FIG. 1E), and a
bactericidal assay (FIG. 4D). These experiments confirm that 519 is
a surface-exposed protein and that it is a useful immunogen. The
hydrophilicity plots, antigenic index, and amphipatic regions of
ORF 519 are provided in FIG. 8. The AMPHI program is used to
predict putative T-cell epitopes (Gao et al 1989, J. Immunol
143:3007; Roberts et al. 1996, AIDS Res Human Retroviruses 12:593;
Quakyi et al. 1992, Scand J Immunol Suppl 11:9). The nucleic acid
sequence of ORF 519 and the amino acid sequence encoded thereby as
provided herein.
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1459>:
TABLE-US-01785 g520.seq 1 atgcctgcgc ttctttcaat acgtcgggca
aacgcgctgc ctttttcgcg 51 catttcggaa aggatgaagt tgctggtgcc
gttaataatg ccggcgatgg 101 atttaatcct gtttgccgcc aaaccttcgc
gcacggcttt gatgattggg 151 ataccgcccg ctactgccgc ttcaaattgg
acgatgacgt tttgtttttc 201 cgccagcggg aagatttcgt tgccgtattc
ggcgagcagt tttttgttgg 251 cggtaacgat gtgtttgccg ttttcaatgg
ctttcaacac cgcttctttg 301 gcaatgcccg tgccgccgaa caattcgacc
aagacatcga cgtctttacg 351 cgcgaacagt tcgaacggat cttttgacaa
gggcgggcga cgggccgatt 401 ttggcgggct ttttcttcgc ttaagtcgca
catggcagaa atacggattt 451 cgcgccccaa gcggcgggaa atttcctctg
cgttgtcccg caacacggca 501 gccgcaccgc cgccgaccgt acctaagcct
aaaagaccga tgtttactgg 551 cttcattgtg tctccttgta agccgactga
aatgtaaata ttga
This corresponds to the amino acid sequence <SEQ ID 1460; ORF
520.ng>:
TABLE-US-01786 g520.pep 1 MPALLSIRRA NALPFSRISE RMKLLVPLIM
PAMDLILFAA KPSRTALMIG 51 IPPATAASNW TMTFCFSASG KISLPYSASS
FLLAVTMCLP FSMAFNTASL 101 AMPVPPNNST KTSTSLRANS SNGSFDKGGR
RADFGGLFLR LSRTWQKYGF 151 RAPSGGKFPL RCPATRQPHR RRPYLSLKDR
CLLASLCLLV SRLKCKY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1461>:
TABLE-US-01787 m520.seq 1 ATGCCTGCGC TTCTTTCAGT ACATCG.GCA
AACGCGCTGC CTTTTTCGCG 51 CATTTCGGrk AGGATGAAGT TGCTGGTGCC
GTTAATAATG CCGGCGATGG 101 ATTTAATCCT GTTTGCCGCC AAACCTTCGC
GCAGGGCTTT GATGATTGGG 151 ATACCGCCCG CTACTGCCGC TTCAAATTGG
ACGATGACGT TTTGTTTTTC 201 CGCCAGCGGG AAGATTTCGT TGCCGTATTC
GGCGAGCAGT TTTTTGTTGG 251 CGGTAACGAT GTGTTTGCCG TTTTCAATGG
CTTTCAACAC CGCATCTTTG 301 GCAATGCCGG TACCGCCGaA CAATTCGACG
ACGACATCGA CGTCTTCACG 351 TGCGACCAGT TCGAACGGAT CTTTGACAAA
GGCTGc.CGG ACGGGCAGGT 401 TTGTCGGGCT TTTTCTTCAC TCAAATCGCA
CACGGCAGAA ATACGGATTT 451 CGCGCCCCAA GCGACGGGAA ATTTCCTCCG
CGTTGTCsCG CAACACGGCA 501 GCCGTACCGC CGCCGACCGT ACCCAAACCT
AAAAGACCGA TGTTTACTGG 551 CTTCATTGTG TCTCCTTGTA AGCCGACTGA
AATGTAAATA TTGA
This corresponds to the amino acid sequence <SEQ ID 1462; ORF
520>:
TABLE-US-01788 m520.pep 1 MPALLSVHXA NALPFSRISX RMKLLVPLIM
PAMDLILFAA KPSRRALMIG 51 IPPATAASNW TMTFCFSASG KISLPYSASS
FLLAVTMCLP FSMAFNTASL 101 AMPVPPNNST TTSTSSRATS SNGSLTKAXR
TGRFVGLFLH SNRTRQKYGF 151 RAPSDGKFPP RCXATRQPYR RRPYPNLKDR
CLLASLCLLV SRLKCKY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 520
shows 87.3% identity over a 197 aa overlap with a predicted ORF
(ORF 520.ng) from N. gonorrhoeae:
TABLE-US-01789 m520/g520 10 20 30 40 50 60 m520.pep
MPALLSVHRANALPFSRISXRMKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNW
||||||::||||||||||| |||||||||||||||||||||||| ||||||||||||||| g520
MPALLSIRRANALPFSRISERMKLLVPLIMPAMDLILFAAKPSRTALMIGIPPATAASNW 10 20
30 40 50 60 70 80 90 100 110 120 m520.pep
TMTFCFSASGKISLPYSASSFLLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATS
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||:| g520
TMTFCFSASGKISLPYSASSFLLAVTMCLPFSMAFNTASLAMPVPPNNSTKTSTSLRANS 70 80
90 100 110 120 130 140 150 160 170 180 m520.pep
SNGSLTKAARTGRFVGLFLHSNRTRQKYGFRAPSDGKFPPRCXATRQPYRRRPYPNLKDR ||||:
|::| : | ||||: :|| ||||||||| |||| || |||||:||||| :|||| g520
SNGSFDKGGRRADFGGLFLRLSRTWQKYGFRAPSGGKFPLRCPATRQPHRRRPYLSLKDR 130
140 150 160 170 180 190 m520.pep CLLASLCLLVSRLKCKY
||||||||||||||||| g520 CLLASLCLLVSRLKCKY 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1463>:
TABLE-US-01790 a520.seq 1 ATGCCTGCGC TTCTTTCAGT ACATCGG.CA
AACGCGCTGC CTTTTTCGCG 51 CATTTCGGAG AGGATGAAGT TGCTGGTGCC
GTTAATAATG CCGGCGATGG 101 ATTTAATCCT GTTTGCCGCC AAACCTTCGC
GCAGGGCTTT GATGATTGGG 151 ATACCGCCCG CTACTGCCGC TTCAAATTGG
ACGATGACGT TTTGTTTTTC 201 CGCCAGCGGG AAGATTTCGT TGCCGTATTC
GGCGAGCAGT TTTTTGTTGG 251 CGGTAACGAT GTGTTTGCCG TTTTCAATGG
CTTTCAACAC CGCATCTTTG 301 GCAATGCCGG TACCGCCGAA CAATTCGACG
ACGACATCGA CGTCTTCACG 351 TGCGACCAGT TCGAACGGAT CTTTGACAAA
GGCTG..CGG ACGGGCAGGT 401 TTGTCGGGCT TTTTCTTCAC TCAAATCGCA
CACGGCAGAA ATACGGATTT 451 CGCGCCCCAA GCGACGGGAA ATTTCCTCCG
CGTTGTCCCG CAACACGGCA 501 GCCGTACCGC CGCCGACCGT ACCCAAACCT
AAAAGACCGA TGTTTACTGG 551 CTTCATTGTG TCTCCTTGTA AGCCGACTGA
AATGTAAATA TTGA
This corresponds to the amino acid sequence <SEQ ID 1464; ORF
520.a>:
TABLE-US-01791 a520.pep 1 MPALLSVHRX NALPFSRISE RMKLLVPLIM
PAMDLILFAA KPSRRALMIG 51 IPPATAASNW TMTFCFSASG KISLPYSASS
FLLAVTMCLP FSMAFNTASL 101 AMPVPPNNST TTSTSSRATS SNGSLTKAXR
TGRFVGLFLH SNRTRQKYGF 151 RAPSDGKFPP RCPATRQPYR RRPYPNLKDR
CLLASLCLLV SRLKCKY* m520/a520 98.0% identity in 197 aa overlap 10
20 30 40 50 60 m520.pep
MPALLSVHXANALPFSRISXRMKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNW
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| a520
MPALLSVHRXNALPFSRISERMKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNW 10 20
30 40 50 60 70 80 90 100 110 120 m520.pep
TMTFCFSASGKISLPYSASSFLLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a520
TMTFCFSASGKISLPYSASSFLLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATS 70 80
90 100 110 120 130 140 150 160 170 180 m520.pep
SNGSLTKAXRTGRFVGLFLHSNRTRQKYGFRAPSDGKFPPRCXATRQPYRRRPYPNLKDR
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| a520
SNGSLTKAXRTGRFVGLFLHSNRTRQKYGFRAPSDGKFPPRCPATRQPYRRRPYPNLKDR 130
140 150 160 170 180 190 m520.pep CLLASLCLLVSRLKCKYX
|||||||||||||||||| a520 CLLASLCLLVSRLKCKYX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1465>:
TABLE-US-01792 g520-1.seq 1 ATGAAGTTGC TGGTGCCGTT AATAATGCCG
GCGATGGATT TAATCCTGTT 51 TGCCGCCAAA CCTTCGCGCA GGGCTTTGAT
GATTGGGATA CCGCCCGCTA 101 CTGCCGCTTC AAATTGGACG ATGACGTTTT
GTTTTTCCGC CAGCGGGAAG 151 ATTTCGTTGC CGTATTCGGC GAGCAGTTTT
TTGTTGGCGG TAACGATGTG 201 TTTGCCGTTT TCAATGGCTT TCAACACCGC
TTCTTTGGCA ATGCCCGTGC 251 CGccgAACAA TTCGACGACG ACATCGACGT
CTTTACGCGC GACCAGTtCG 301 AACGGATCTT TGACAAAGGC GGCGGACGGG
CAGATTTGGC GGGCTTTTTC 351 TTCGCTTAAG TCGCACATGG CAGAAATACG
GATTTCGCGC CCCAAGCGGC 401 GGGAAATTTC CTCTGCGTTG TCCCGCAACA
CGGCAGCCGC ACCGCCGCCG 451 ACCgTACCTA AGCCTAAAAG ACCGATGTTT
ACTGGCTTCA TTGTGTCTCC 501 TTGTAAGCCG ACTGAAATGT AA
This corresponds to the amino acid sequence <SEQ ID 1466; ORF
520-1.ng>:
TABLE-US-01793 g520-1.pep 1 MKLLVPLIMP AMDLILFAAK PSRRALMIGI
PPATAASNWT MTFCFSASGK 51 ISLPYSASSF LLAVTMCLPF SMAFNTASLA
MPVPPNNSTT TSTSLRATSS 101 NGSLTKAADG QIWRAFSSLK SHMAEIRISR
PKRREISSAL SRNTAAAPPP 151 TVPKPKRPMF TGFIVSPCKP TEM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1467>:
TABLE-US-01794 m520-1.seq 1 ATGAAGTTGC TGGTGCCGTT AATAATGCCG
GCGATGGATT TAATCCTGTT 51 TGCCGCCAAA CCTTCGCGCA GGGCTTTGAT
GATTGGGATA CCGCCCGCTA 101 CTGCCGCTTC AAATTGGACG ATGACGTTTT
GTTTTTCCGC CAGCGGGAAG 151 ATTTCGTTGC CGTATTCGGC GAGCAGTTTT
TTGTTGGCGG TAACGATGTG 201 TTTGCCGTTT TCAATGGCTT TCAACACCGC
ATCTTTGGCA ATGCCGGTAC 251 CGCCGAACAA TTCGACGACG ACATCGACGT
CTTCACGTGC GACCAGTTCG 301 AACGGATCTT TGACAAAGGC TGCGGACGGG
CAGGTTTGTC GGGCTTTTTC 351 TTCACTCAAA TCGCACACGG CAGAAATACG
GATTTCGCGC CCCAAGCGAC 401 GGGAAATTTC CTCCGCGTTG TCCCGCAACA
CGGCAGCCGT ACCGCCGCCG 451 ACCGTACCCA AACCTAAAAG ACCGATGTTT
ACTGGCTTCA TTGTGTCTCC 501 TTGTAAGCCG ACTGAAATGT AA
This corresponds to the amino acid sequence <SEQ ID 1468; ORF
520-1>:
TABLE-US-01795 m520-1.pep 1 MKLLVPLIMP AMDLILFAAK PSRRALMIGI
PPATAASNWT MTFCFSASGK 51 ISLPYSASSF LLAVTMCLPF SMAFNTASLA
MPVPPNNSTT TSTSSRATSS 101 NGSLTKAADG QVCRAFSSLK SHTAEIRISR
PKRREISSAL SRNTAAVPPP 151 TVPKPKRPMF TGFIVSPCKP TEM* g520-1/m520-1
97.1% identity in 173 aa overlap 10 20 30 40 50 60 g520-1.pep
MKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNWTMTFCFSASGKISLPYSASSF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m520-1
MKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNWTMTFCFSASGKISLPYSASSF 10 20
30 40 50 60 70 80 90 100 110 120 g520-1.pep
LLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSLRATSSNGSLTKAADGQIWRAFSSLK
|||||||||||||||||||||||||||||||||| ||||||||||||||||: ||||||| m520-1
LLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATSSNGSLTKAADGQVCRAFSSLK 70 80
90 100 110 120 130 140 150 160 170 g520-1.pep
SHMAEIRISRPKRREISSALSRNTAAAPPPTVPKPKRPMFTGFIVSPCKPTEMX ||
|||||||||||||||||||||||:||||||||||||||||||||||||||| m520-1
SHTAEIRISRPKRREISSALSRNTAAVPPPTVPKPKRPMFTGFIVSPCKPTEMX 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1469>:
TABLE-US-01796 a520-1.seq 1 ATGAAGTTGC TGGTGCCGTT AATAATGCCG
GCGATGGATT TAATCCTGTT 51 TGCCGCCAAA CCTTCGCGCA GGGCTTTGAT
GATTGGGATA CCGCCCGCTA 101 CTGCCGCTTC AAATTGGACG ATGACGTTTT
GTTTTTCCGC CAGCGGGAAG 151 ATTTCGTTGC CGTATTCGGC GAGCAGTTTT
TTGTTGGCGG TAACGATGTG 201 TTTGCCGTTT TCAATGGCTT TCAACACCGC
ATCTTTGGCA ATGCCGGTAC 251 CGCCGAACAA TTCGACGACG ACATCGACGT
CTTCACGTGC GACCAGTTCG 301 AACGGATCTT TGACAAAGGC TGCGGACGGG
CAGGTTTGTC GGGCTTTTTC 351 TTCACTCAAA TCGCACACGG CAGAAATACG
GATTTCGCGC CCCAAGCGAC 401 GGGAAATTTC CTCCGCGTTG TCCCGCAACA
CGGCAGCCGT ACCGCCGCCG 451 ACCGTACCCA AACCTAAAAG ACCGATGTTT
ACTGGCTTCA TTGTGTCTCC 501 TTGTAAGCCG ACTGAAATGT AA
This corresponds to the amino acid sequence <SEQ ID 1470; ORF
520-1.a>:
TABLE-US-01797 a520-1.pep 1 MKLLVPLIMP AMDLILFAAK PSRRALMIGI
PPATAASNWT MTFCFSASGK 51 ISLPYSASSF LLAVTMCLPF SMAFNTASLA
MPVPPNNSTT TSTSSRATSS 101 NGSLTKAADG QVCRAFSSLK SHTAEIRISR
PKRREISSAL SRNTAAVPPP 151 TVPKPKRPMF TGFIVSPCKP TEM* m520-1/a520-1
100.0% identity in 173 aa overlap 10 20 30 40 50 60 a520-1.pep
MKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNWTMTFCFSASGKISLPYSASSF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m520-1
MKLLVPLIMPAMDLILFAAKPSRRALMIGIPPATAASNWTMTFCFSASGKISLPYSASSF 10 20
30 40 50 60 70 80 90 100 110 120 a520-1.pep
LLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATSSNGSLTKAADGQVCRAFSSLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m520-1
LLAVTMCLPFSMAFNTASLAMPVPPNNSTTTSTSSRATSSNGSLTKAADGQVCRAFSSLK 70 80
90 100 110 120 130 140 150 160 170 a520-1.pep
SHTAEIRISRPKRREISSALSRNTAAVPPPTVPKPKRPMFTGFIVSPCKPTEMX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m520-1
SHTAEIRISRPKRREISSALSRNTAAVPPPTVPKPKRPMFTGFIVSPCKPTEMX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1471>:
TABLE-US-01798 g521.seq 1 ATGAAATCAA AACTCCCCTT AATCCTAATC
AACCTTTCCC TGATTTCAAG 51 CCCATTGGGT GCGAATGCGG CCAAAATCTA
TACCTGCACA ATCAACGGAG 101 AAACCGTTTA CACCACCAAG CCGTCTAAAA
GCTGCCACTC AACCGATTTG 151 CCCCCAATCG GCAACTACAG CAGCGAACGC
TATATCCTGC CCCAAACTCC 201 CGAACCGGCA CCATCACCGT CAAACGGCGG
ACAGGCTGTC AAATATAAAG 251 CCCCGGTCAA AACAGTATCC AAGCCGGCAA
AATCCAATAC GCCGCCTCAA 301 CAAGCACCTG TAAATAACAG CAGACGCTCC
ATTCTcgaag caGaattaag 351 cAatgaacgc aaagccctGa ctGaAGCCCA
AAAAATGTTA TCACAagcac 401 gtCtGGCAAA AGGCGgcaAC AtcaaCCatc
aaaAaatcaa cgcattgtaa 451 AGCAATGTTt tggacAGACA GCAAAATaTC
Caagcactgc aaaGAgAATt 501 GGGACGTATG TAA
This corresponds to the amino acid sequence <SEQ ID 1472; ORF
521.ng>:
TABLE-US-01799 g521n.pep 1 MKSKLPLILI NLSLISSPLG ANAAKIYTCT
INGETVYTTK PSKSCHSTDL 51 PPIGNYSSER YILPQTPEPA PSPSNGGQAV
KYKAPVKTVS KPAKSNTPPQ 101 QAPVNNSRRS ILEAELSNER KALTEAQKML
SQARLAKGGN INHQKINAL* 151 SNVLDRQQNI QALQRELGRM *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1473>:
TABLE-US-01800 m521.seq 1 ATGAAATCAA AACTCCTCTT AATCCTAATC
AACTTTTCCC TGATTTCAAG 51 CCCATTGGGT GCGAATGCGG CCAAAATCTA
sACCTGCACA ATCAACGGAG 101 AAACCGTTTA CACCAsCAAG CCGTCCAAAA
GCTGCCACTC AACCGATTTG 151 CCCCCAATCG GCAACTACAG CAGCGAACGC
TATATCCCGC CCCAAACGCC 201 CGAACCGGTA TCATCACCGT CAAACGGCGG
ACwGGTTGTC AAATATAAAG 251 CCCCGGTCAA AACAGTATCC AAGCCGGCAA
AATCCArTAC GCCGCCGCCG 301 CAACAAGCAC CCTCAAACAA CAGCAGACGC
TCCATTCTCG AAACAGAATT 351 GAGCAACGAA CGCAAAGCAT TGGTTGAAGC
CCAAAAAATG TTATCACAAG 401 CACGTCTGGC AAAGGGCGGC AACATCAACC
ATCAAGAAAT AAATGCATTA 451 CAAAGCAATG TATTGGACAG GCAGCAAAAT
ATTCAAGCCC TGCAAAGGGA 501 ACTGGGGCGT ATGTAA
This corresponds to the amino acid sequence <SEQ ID 1474; ORF
521>:
TABLE-US-01801 m521.pep 1 MKSKLLLILI NFSLISSPLG ANAAKIXTCT
INGETVYTXK PSKSCHSTDL 51 PPIGNYSSER YIPPQTPEPV SSPSNGGXVV
KYKAPVKTVS KPAKSXTPPP 101 QQAPSNNSRR SILETELSNE RKALVEAQKM
LSQARLAKGG NINHQEINAL 151 QSNVLDRQQN IQALQRELGR M*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 521
shows 90.6% identity over a 171 aa overlap with a predicted ORF
(ORF 521.ng) from N. gonorrhoeae:
TABLE-US-01802 m521/g521 10 20 30 40 50 60 m521.pep
MKSKLLLILINFSLISSPLGANAAKIXTCTINGETVYTXKPSKSCHSTDLPPIGNYSSER |||||
|||||:|||||||||||||| |||||||||||:||||||||||||||||||||| g521
MKSKLPLILINLSLISSPLGANAAKIYTCTINGETVYTTKPSKSCHSTDLPPIGNYSSER 10 20
30 40 50 60 70 80 90 100 110 120 m521.pep
YIPPQTPEPVSSPSNGGXVVKYKAPVKTVSKPAKSXTPPPQQAPSNNSRRSILETELSNE ||
||||||: |||||| :|||||||||||||||| ||| |||| |||||||||:||||| g521
YILPQTPEPAPSPSNGGQAVKYKAPVKTVSKPAKSNTPP-QQAPVNNSRRSILEAELSNE 70 80
90 100 110 130 140 150 160 170 m521.pep
RKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQNIQALQRELGRMX
||||:||||||||||||||||||||:|||| ||||||||||||||||||||| g521
RKALTEAQKMLSQARLAKGGNINHQKINALXSNVLDRQQNIQALQRELGRMX 120 130 140
150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1475>:
TABLE-US-01803 a521.seq 1 ATGAAATCAA AACTCCCCTT AATCCTAATC
AACTTTTCCC TGATTTCAAG 51 CCCATTGGGT GCGAATGCGG CCAAAATCTA
CACCTGCACA ATCAACGGAG 101 AAACCGTTTA CACCACCAAG CCGTCCAAAA
GCTGCCTCTC AACCGATTTG 151 CCCCCAATCG GCAACTACAG CAGCGAACGC
TATATCCCGC CCCAAACATC 201 CGAACCGACA CCATCACCGT CAAACGGCGG
ACAGGCTGTC AAATATAAAG 251 CCCCGGTCAA AACAGTATCC AAGCCGGCAA
AATCCAATAC GCCGCCGCCG 301 CAACAAGCAC CCTCAAACAA CAGCAGACGC
TCCATTCTCG AAACAGAATT 351 GAGCAACGAA CGCAAAGCAT TGGTTGAAGC
CCAAAAAATG TTATCACAAG 401 CACGTCTGGC AAAAGGCGGC AACATCAACC
ATCAAGAAAT CAACGCATTG 451 CAAAGCAATG TATTGGACAG GCAGCAAAAT
ATCCAAGCAC TGCAAAGAGA 501 ATTGGGACGT ATGTAA
This corresponds to the amino acid sequence <SEQ ID 1476; ORF
521.a>:
TABLE-US-01804 a521.pep 1 MKSKLPLILI NFSLISSPLG ANAAKIYTCT
INGETVYTTK PSKSCLSTDL 51 PPIGNYSSER YIPPQTSEPT PSPSNGGQAV
KYKAPVKTVS KPAKSNTPPP 101 QQAPSNNSRR SILETELSNE RKALVEAQKM
LSQARLAKGG NINHQEINAL 151 QSVLDRQQN IQALQRELGR M* m521/a521 94.2%
identity in 171 aa overlap 10 20 30 40 50 60 m521.pep
MKSKLLLILINFSLISSPLGANAAKIXTCTINGETVYTXKPSKSCHSTDLPPIGNYSSER |||||
|||||||||||||||||||| |||||||||||:|||||| |||||||||||||| a521
MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKSCLSTDLPPIGNYSSER 10 20
30 40 50 60 70 80 90 100 110 120 m521.pep
YIPPQTPEPVSSPSNGGXVVKYKAPVKTVSKPAKSXTPPPQQAPSNNSRRSILETELSNE ||||||
||: |||||| :|||||||||||||||| |||||||||||||||||||||||| a521
YIPPQTSEPTPSPSNGGQAVKYKAPVKTVSKPAKSNTPPPQQAPSNNSRRSILETELSNE 70 80
90 100 110 120 130 140 150 160 170 m521.pep
RKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQNIQALQRELGRMX
|||||||||||||||||||||||||||||||||||||||||||||||||||| a521
RKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQNIQALQRELGRMX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1477>:
TABLE-US-01805 g522.seq 1 atgactgagc cgaaacacga aacgccgacg
gaagagcagg ttgccgcgcg 51 caaaaaagca aaagccaaaa tccgcaccat
ccgcatttgg gcgtgggtca 101 ttttggcgtt gctcgcttca accgccctgc
tctcccaatg cgcgatgtcc 151 aaaccgcagg caaaacagaa aattgtcgag
tcttgcatga aaaatattcc 201 gtttgctgaa aaatggcaga acgatttgaa
agcgcgcggc ttggatgcgg 251 acaatacccg tctcgccgtc gactactgca
aatgtatgtg ggagcagcct 301 ttggacggat tgagcgagaa acagatcagc
tccttcggca aactcggtgc 351 acaagaacag cttgacctgc tcggcggcgc
aaacgcgttt gaaactcgag 401 acaaacaatg tgtcgcggat ttgaaagccg
attga
This corresponds to the amino acid sequence <SEQ ID 1478; ORF
522.ng>:
TABLE-US-01806 g522.pep 1 MTEPKHETPT EEQVAARKKA KAKIRTIRIW
AWVILALLAS TALLSQCAMS 51 KPQAKQKIVE SCMKNIPFAE KWQNDLKARG
LDADNTRLAV DYCKCMWEQP 101 LDGLSEKQIS SFGKLGAQEQ LDLLGGANAF
ETRDKQCVAD LKAD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1479>:
TABLE-US-01807 m522.seq 1 ATGACTGAGC CGAAACACGA AATGCTGACG
AAAGAGCAGG TTGCCGCGCG 51 CAAAAAAGCA AAAGCCAAAA TCCGCACCAT
CCGCATTTGG GCGTGGGTCA 101 TTTTGGCGTT GCTCGCTTTA ACCGCCCTGC
TCTCCCAATG CGCGATGTCC 151 AAACCGCAGG CAAAACAGAA AATTGTCGAG
TCTTGCGTGA AGAATATTCC 201 GTTTGCCGAA AAATGGCAAA ACGATTTGCG
GGCCCGCGGT TTAGATTCAA 251 ACAATACCCG CCTCGCCGTC GACTACTGCA
AATGTATGTG GGAGCAGCCT 301 TTGGACAGAT TGAGCGAGAA ACAGATTAGA
TCCTTCGGCA AACTCGGCGC 351 ACAAGAACAG CTTGACCTGC TCGGCGGCGC
AAATGCCTTT GAAGCACGTG 401 ACAAGCAGTG TGTTGCCGAT TTGAAATCAG
AATAA
This corresponds to the amino acid sequence <SEQ ID 1480; ORF
522>:
TABLE-US-01808 m522.pep 1 MTEPKHEMLT KEQVAARKKA KAKIRTIRIW
AWVILALLAL TALLSQCAMS 51 KPQAKQKIVE SCVKNIPFAE KWQNDLRARG
LDSNNTRLAV DYCKCMWEQP 101 LDRLSEKQIR SFGKLGAQEQ LDLLGGANAF
EARDKQCVAD LKSE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 522
shows 91.0% identity over a 144 aa overlap with a predicted ORF
(ORF 522.ng) from N. gonorrhoeae:
TABLE-US-01809 m522/g522 10 20 30 40 50 60 m522.pep
MTEPKHEMLTKEQVAARKKAKAKIRTIRIWAWVILALLALTALLSQCAMSKPQAKQKIVE
||||||| |:|||||||||||||||||||||||||||| |||||||||||||||||||| g522
MTEPKHETPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALLSQCAMSKPQAKQKIVE 10 20
30 40 50 60 70 80 90 100 110 120 m522.pep
SCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLDRLSEKQIRSFGKLGAQEQ
||:|||||||||||||:|||||::|||||||||||||||||| |||||| |||||||||| g522
SCMKNIPFAEKWQNDLKARGLDADNTRLAVDYCKCMWEQPLDGLSEKQISSFGKLGAQEQ 70 80
90 100 110 120 130 140 m522.pep LDLLGGANAFEARDKQCVADLKSEX
|||||||||||:||||||||||:: g522 LDLLGGANAFETRDKQCVADLKAD 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1481>:
TABLE-US-01810 a522.seq 1 ATGACTGAGC CGAAACACGA AATGCCGACG
GAAGAGCAGG TTGCCGCGCG 51 CAAAAAAGCA AAAGCCAAAA TCCGCACCAT
CCGCATTTGG GCATGGGTCA 101 TTTTGGCGTT GCTCGCTTCA ACCGCCCTGC
TCTCCCAATG CGCGATGTCC 151 AAACCGCAGG CAAAACAGAA AATTGTCGAG
TCTTGCGTGA AGAATATTCC 201 GTTTGCCGAA AAATGGCAAA ACGATTTGCG
GGCCCGCGGT TTAGATTCAA 251 ACAATACCCG CCTTACCGTC GACTACTGCA
AATGTATGTG GGAGCAGCCT 301 TTGGACAGAT TGAGCGAGAA ACAGATTAGT
TCCTTCGGCA AACTCGGCGC 351 ACAAGAACAG CTTGACCTGC TCGGCGGCGC
AAATGCCTTT GAAACGCGAG 401 ACAAGCAGTG TGTTGCCGAT TTGAAATCAG
AATAA
This corresponds to the amino acid sequence <SEQ ID 1482; ORF
522.a>:
TABLE-US-01811 a522.pep 1 MTEPKHEMPT EEQVAARKKA KAKIRTIRIW
AWVILALLAS TALLSQCAMS 51 KPQAKQKIVE SCVKNIPFAE KWQNDLRARG
LDSNNTRLTV DYCKCMWEQP 101 LDRLSEKQIS SFGKLGAQEQ LDLLGGANAF
ETRDKQCVAD LKSE* m522/a522 95.8% identity in 144 aa overlap 10 20
30 40 50 60 m522.pep
MTEPKHEMLTKEQVAARKKAKAKIRTIRIWAWVILALLALTALLSQCAMSKPQAKQKIVE
|||||||| |:|||||||||||||||||||||||||||| |||||||||||||||||||| a522
MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALLSQCAMSKPQAKQKIVE 10 20
30 40 50 60 70 80 90 100 110 120 m522.pep
SCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLDRLSEKQIRSFGKLGAQEQ
||||||||||||||||||||||||||||:|||||||||||||||||||| |||||||||| a522
SCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLDRLSEKQISSFGKLGAQEQ 70 80
90 100 110 120 130 140 m522.pep LDLLGGANAFEARDKQCVADLKSEX
|||||||||||:||||||||||||| a522 LDLLGGANAFETRDKQCVADLKSEX 130
140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1483>:
TABLE-US-01812 g523.seq 1 atgactgtat ggtttgttgc cgctgttgcc
gtcttaatca tcgaattatt 51 gacgggaacg gtttatcttt tggttgtcag
cgcggctttg gcgggttcgg 101 gcattgccta cgggctgact ggcagcacgc
ctgccgccgt cttgaccgcc 151 gcactgcttt ccgcgctggg catttggttc
gtacatgcca aaaccgccgt 201 gggaaaagtt gaaacggatt catatcagga
tttggatacc ggaaaatatg 251 ccgaaatcct ccgatacaca ggcggcaacc
gttacgaagt tttttatcgc 301 ggtacgcact ggcaggcgca aaatacgggg
caggaagtgt ttgaaccggg 351 aacgcgcgcc ctcatcgtcc gcaaagaagg
taaccttctt atcatcgcaa 401 acccttaa
This corresponds to the amino acid sequence <SEQ ID 1484; ORF
523.ng>:
TABLE-US-01813 g523.pep 1 MTVWFVAAVA VLIIELLTGT VYLLVVSAAL
AGSGIAYGLT GSTPAAVLTA 51 ALLSALGIWF VHAKTAVGKV ETDSYQDLDT
GKYAEILRYT GGNRYEVFYR 101 GTHWQAQNTG QEVFEPGTRA LIVRKEGNLL
IIANP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1485>:
TABLE-US-01814 m523.seq (partial) 1 ..GCCGTCTTAA TCATCGAATT
ATTGACGGGA ACGGTTTATC TTTTGGTTGT 51 nAGCGCGGCT TTGGCGGGTT
CGGGCATTGC TTACGGGCTG ACCGGCAGTA 101 CGCCTGCCGC CGTCTTGACC
GnCGCTCTGC TTTCCGCGCT GGGTATTTnG 151 TTCGTACACG CCAAAACCGC
CGTTAGAAAA GTTGAAACGG ATTCATATCA 201 GGATTTGGAT GCCGGACAAT
ATGTCGAAAT CCTCCGACAC ACAGGCGGCA 251 ACCGTTACGA AGTTTTtTAT
CGCGGTACGc ACTGGCAGGC TCAAAATACG 301 GGGCAAGAAG AGCTTGAACC
AGGAACTCGC GCCCTCATTG TCCGCAAGGA 351 AGGCAACCTT CTTATTATCA
CACACCCTTAA
This corresponds to the amino acid sequence <SEQ ID 1486; ORF
523>:
TABLE-US-01815 m523.pep (partial) 1 ..AVLIIELLTG TVYLLVVSAA
LAGSGIAYGL TGSTPAAVLT XALLSALGIX 51 FVHAKTAVRK VETDSYQDLD
AGQYVEILRH TGGNRYEVFY RGTHWQAQNT 101 GQEELEPGTR ALIVRKEGNL
LIITHP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF523
shows 91.3% identity over a 126 aa overlap with a predicted ORF
(ORF 523.ng) from N. gonorrhoeae:
TABLE-US-01816 m523/g523 10 20 30 40 50 m523.pep
AVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTPAAVLTXALLSALGIXF
|||||||||||||||||||||||||||||||||||||||| |||||||| | g523
MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTPAAVLTAALLSALGIWF 10 20
30 40 50 60 60 70 80 90 100 110 m523.pep
VHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGTHWQAQNTGQEELEPGTRA
||||||| |||||||||||:|:|:||||:||||||||||||||||||||||| :|||||| g523
VHAKTAVGKVETDSYQDLDTGKYAEILRYTGGNRYEVFYRGTHWQAQNTGQEVFEPGTRA 70 80
90 100 110 120 120 m523.pep LIVRKEGNLLIITHP ||||||||||||::| g523
LIVRKEGNLLIIANPX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1487>:
TABLE-US-01817 a523.seq 1 ATGACTGTAT GGTTTGTTGC CGCTGTTGCC
GTCTTAATCA TCGAATTATT 51 GACGGGAACG GTTTATCTTT TGGTTGTCAG
CGCGGCTTTG GCGGGTTCGG 101 GCATTGCTTA CGGGCTGACC GGCAGCACGC
CTGCCGCCGT CTTGACCGCC 151 GCTCTGCTTT CCGCGCTGGG TATTTGGTTC
GTACACGCCA AAACCGCCGT 201 GGGAAAAGTT GAAACGGATT CATATCAGGA
TTTGGATGCC GGGCAATATG 251 CCGAAATCCT CCGGCACGCA GGCGGCAACC
GTTACGAAGT TTTTTATCGC 301 GGTACGCACT GGCAGGCTCA AAATACGGGG
CAAGAAGAGC TTGAACCAGG 351 AACGCGCGCC CTAATCGTCC GCAAGGAAGG
CAACCTTCTT ATCATCGCAA 401 AACCTTAA
This corresponds to the amino acid sequence <SEQ ID 1488; ORF
523.a>:
TABLE-US-01818 a523.pep 1 MTVWFVAAVA VLIIELLTGT VYLLVVSAAL
AGSGIAYGLT GSTPAAVLTA 51 ALLSALGIWF VHAKTAVGKV ETDSYQDLDA
GQYAEILRHA GGNRYEVFYR 101 GTHWQAQNTG QEELEPGTRA LIVRKEGNLL IIAKP*
m523/a523 94.4% identity in 126 aa overlap 10 20 30 40 50 m523.pep
AVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTPAAVLTXALLSALGIXF
|||||||||||||||||||||||||||||||||||||||| |||||||| | a523
MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTPAAVLTAALLSALGIWF 10 20
30 40 50 60 60 70 80 90 100 110 m523.pep
VHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGTHWQAQNTGQEELEPGTRA
||||||| |||||||||||||||:|||||:|||||||||||||||||||||||||||||| a523
VHAKTAVGKVETDSYQDLDAGQYAEILRHAGGNRYEVFYRGTHWQAQNTGQEELEPGTRA 70 80
90 100 110 120 120 m523.pep LIVRKEGNLLIITHPX ||||||||||||::|| a523
LIVRKEGNLLIIAKPX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1489>:
TABLE-US-01819 g525.seq 1 atgaagtacg tccggttatt tttcctcggc
acggcactcg ccggcactca 51 agcggcggct gccgaaatgg ttcaaatcga
aggcggcagc taccgcccgc 101 tttatctgaa aaaagatacc ggcctgatta
aagtcaaacc gttcaaactg 151 gataaatatc ccgttaccaa tgccgagttt
gccgaatttg tcaacagcca 201 cccccaatgg caaaaaggca ggatcggttc
caaacaggca gaacccgctt 251 acctgaagca ttggatgaaa aacggcagcc
gcagctatgc gccgaaggcg 301 ggcgaattga aacagccggt taccaatatt
tcctggtttg ccgccaacgc 351 ctattgcgcc gcacaaggca aacgcctgcc
gaccatcgac gaatgggaat 401 ttgccggact tgcttccgcc acgcagaaaa
aacggctcaa acgaacccgg 451 ctacaaccgc actattctcg attggtatgc
cgacggcgga cggaaaggcc 501 tgcacgatgt cggcaaagca ccgcccgaac
tactggggtg tttatgatat 551 gcacgggctg a
This corresponds to the amino acid sequence <SEQ ID 1490; ORF
525.ng>:
TABLE-US-01820 g525.pep 1 MKYVRLFFLG TALAGTQAAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GELKQPVTNI SWFAANAYCA AQGKRLPTID
EWEFAGLASA TQKKRLKRTR 151 LQPHYSRLVC RRRTERPARC RQSTARTTGV FMICTG
*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1491>:
TABLE-US-01821 m525.seq 1 ATGAAGTATG TCCGGTTATT TTwCCTCGGC
GCGGCACTCG cCrrCACTCA 51 ArCGGCGGCT GcCGAAATGG TTCAAATCGA
AGGCGGCAgC TACCGCCCrC 101 TTTATCTGAA AAAAGATACC GGCCTGATTA
AAGTCAAACC GTTCAAACTG 151 GATAAATATC CCGTTACCAA TGCCGAGTTT
GCCGAATTTG TCAACAGCCA 201 CCCCCAATGG CAAAAAGGCA GGATCGGTTC
CAAACAGGCA GAACCCGCTT 251 ACCTGAAGCA TTGGATGAAA AACGGCAGCC
GCAGCTATGc GCCGAAGgCG 301 GgCGAATTAA AACAACCGGT AACCAATGTT
TCCTGGwTTG CCGCCAAcGC 351 CTAtTGCGCC GCACAAGGCA AACGCCTGCC
GACCATTGAC GAATGGGAAT 401 TTGCCGGACT TGCTTCCGCC ACGCAGAAAA
A.CGGCTCAA ACGAACCCGG 451 CTACAACCGC ACTATTCTCG ATTGGTATGC
CGACGGCGGA CGGAAAGGCC 501 TGCACGATGT CGGCA.AAGG CCGCCCGAAC
TACTGGGGCG TTTATGATAT 551 GCACGGGCTG A
This corresponds to the amino acid sequence <SEQ ID 1492; ORF
525>:
TABLE-US-01822 m525.pep 1 MKYVRLFXLG AALAXTQXAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GELKQPVTNV SWXAANAYCA AQGKRLPTID
EWEFAGLASA TQKXRLKRTR 151 LQPHYSRLVC RRRTERPARC RXKAARTTGA
FMICTG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 525
shows 94.1% identity over a 186 aa overlap with a predicted ORF
(ORF 525.ng) from N. gonorrhoeae:
TABLE-US-01823 m525/g525 10 20 30 40 50 60 m525.pep
MKYVRLFXLGAALAXTQXAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF
||||||| ||:||| || |||||||||||||||||||||||||||||||||||||||||| g525
MKYVRLFFLGTALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF 10 20
30 40 50 60 70 80 90 100 110 120 m525.pep
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNVSWXAANAYCA
|||||||||||||||||||||||||||||||||||||||||||||||||:|| ||||||| g525
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNISWFAANAYCA 70 80
90 100 110 120 130 140 150 160 170 180 m525.pep
AQGKRLPTIDEWEFAGLASATQKXRLKRTRLQPHYSRLVCRRRTERPARCRXKAARTTGA
||||||||||||||||||||||| ||||||||||||||||||||||||||| ::|||||: g525
AQGKRLPTIDEWEFAGLASATQKKRLKRTRLQPHYSRLVCRRRTERPARCRQSTARTTGV 130
140 150 160 170 180 m525.pep FMICTGX ||||||| g525 FMICTGX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1493>:
TABLE-US-01824 a525.seq 1 ATGAAGTTTA CCCGGTTACT CTTTCTCTGT
GCGGCACTCG CCGGCACTCA 51 AGCGGCAGCT GCCGAAATGG TTCAAATCGA
AGGCGGCAGC TACCGCCCGC 101 TTTATCTGAA AAAAGATACC GGCCTGATTA
AAGTCAAACC GTTCAAACTG 151 GATAAATATC CCGTTACCAA TGCCGAGTTT
GCCGAATTTG TCAACAGCCA 201 CCCCCAATGG CAAAAAGGCA GGATCGGTTC
CAAACAGGCA GAACCCGCTT 251 ACCTGAAGCA TTGGATGAAA AACGGCAGCC
GCAGCTATGC GCCGAAGGCG 301 GGCGATTTAA AACAACCGGT AACCAATGTT
TCCTGGTTCG CCGCCAACGC 351 CTATTGCGCC GCACAAGGCA AACGCCTGCC
GACCATTGAC GAATGGGAAT 401 TTGCCGGACT TGCCTCCGCC ACGCAG.AAA
AACGGCTCAA ACGAACCCGG 451 CTACAACCGC ACTATTCTCG ACTGGTATGC
GGATGGCGAC CGGAAAGACC 501 TGCACGATGT CGGCAAAG.G TCGCCCGAAC
TACTGGGGCG TTTATGATAT 551 GCACGGTCTG A
This corresponds to the amino acid sequence <SEQ ID 1494; ORF
525.a>:
TABLE-US-01825 a525.pep 1 MKFTRLLFLC AALAGTQAAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GDLKQPVTNV SWFAANAYCA AQGKRLPTID
EWEFAGLASA TQXKRLKRTR 151 LQPHYSRLVC GWRPERPARC RQXVARTTGA FMICTV*
m525/a525 90.8% identity in 185 aa overlap 10 20 30 40 50 60
m525.pep
MKYVRLFXLGAALAXTQXAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF
||::||: | |||| || |||||||||||||||||||||||||||||||||||||||||| a525
MKFTRLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF 10 20
30 40 50 60 70 80 90 100 110 120 m525.pep
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNVSWXAANAYCA
|||||||||||||||||||||||||||||||||||||||||:|||||||||| ||||||| a525
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGDLKQPVTNVSWFAANAYCA 70 80
90 100 110 120 130 140 150 160 170 180 m525.pep
AQGKRLPTIDEWEFAGLASATQKXRLKRTRLQPHYSRLVCRRRTERPARCRXKAARTTGA
|||||||||||||||||||||| |||||||||||||||| | ||||||| :|||||| a525
AQGKRLPTIDEWEFAGLASATQXKRLKRTRLQPHYSRLVCGWRPERPARCRQXVARTTGA 130
140 150 160 170 180 m525.pep FMICTGX ||||| a525 FMICTVX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1495>:
TABLE-US-01826 g525-1.seq 1 ATGAAGTACG TCCGGTTATT TTTCCTCGGC
ACGGCACTCG CCGGCACTCA 51 AGCGGCGGCT GCCGAAATGG TTCAAATCGA
AGGCGGCAGC TACCGCCCGC 101 TTTATCTGAA AAAAGATACC GGCCTGATTA
AAGTCAAACC GTTCAAACTG 151 GATAAATATC CCGTTACCAA TGCCGAGTTT
GCCGAATTTG TCAACAGCCA 201 CCCCCAATGG CAAAAAGGCA GGATCGGTTC
CAAACAGGCA GAACCCGCTT 251 ACCTGAAGCA TTGGATGAAA AACGGCAGCC
GCAGCTATGC GCCGAAGGCG 301 GGCGAATTGA AACAGCCGGT TACCAATATT
TCCTGGTTTG CCGCCAACGC 351 CTATTGCGCC GCACAAGGCA AACGCCTGCC
GACCATCGAC GAATGGGAAT 401 TTGCCGGACT TGCTTCCGCC ACGCAGAAAA
ACGGCTCAAA CGAACCCGGC 451 TACAACCGCA CTATTCTCGA TTGGTATGCC
GACGGCGGAC GGAAAGGCCT 501 GCACGATGTC GGCAAAGACC GCCCGAACTA
CTGGGGTGTT TATGATATGC 551 ACGGGCTGAT TTGGGAATGG ACGGAAGATT
TCAACAGCAG CCTGCTTTCT 601 TCCGGCAATG CCAACGCGCA AATGTTTTGC
AGCGGCGCAT CTGTCGGGGC 651 GAGCGACTCG TCCAACTATG CCGCCTTCCT
CCGCTACGGC ATCCGCACCA 701 GCCTGCAATC CAAATACGTC CTGCACAACT
TGGGCTTCCG CTGCGCAAGC 751 CGATAA
This corresponds to the amino acid sequence <SEQ ID 1496; ORF
525-1.ng>:
TABLE-US-01827 g525-1.pep 1 MKYVRLFFLG TALAGTQAAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GELKQPVTNI SWFAANAYCA AQGKRLPTID
EWEFAGLASA TQKNGSNEPG 151 YNRTILDWYA DGGRKGLHDV GKDRPNYWGV
YDMHGLIWEW TEDFNSSLLS 201 SGNANAQMFC SGASVGASDS SNYAAFLRYG
IRTSLQSKYV LHNLGFRCAS 251 R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1497>:
TABLE-US-01828 m525-1.seq 1 ATGAAGTATG TCCGGTTATT TTTCCTCGGC
GCGGCACTCG CCGGCACTCA 51 AGCGGCGGCT GCCGAAATGG TTCAAATCGA
AGGCGGCAGC TACCGCCCGC 101 TTTATCTGAA AAAAGATACC GGCCTGATTA
AAGTCAAACC GTTCAAACTG 151 GATAAATATC CCGTTACCAA TGCCGAGTTT
GCCGAATTTG TCAACAGCCA 201 CCCCCAATGG CAAAAAGGCA GGATCGGTTC
CAAACAGGCA GAACCCGCTT 251 ACCTGAAGCA TTGGATGAAA AACGGCAGCC
GCAGCTATGC GCCGAAGGCG 301 GGCGAATTAA AACAACCGGT AACCAATGTT
TCCTGGTTTG CCGCCAACGC 351 CTATTGCGCC GCACAAGGCA AACGCCTGCC
GACCATTGAC GAATGGGAAT 401 TTGCCGGACT TGCTTCCGCC ACGCAGAAAA
ACGGCTCAAA CGAACCCGGC 451 TACAACCGCA CTATTCTCGA TTGGTATGCC
GACGGCGGAC GGAAAGGCCT 501 GCACGATGTC GGCAAAGGCC GCCCGAACTA
CTGGGGCGTT TATGATATGC 551 ACGGGCTGAT TTGGGAATGG ACGGAAGATT
TCAACAGCAG CCTGCTTTCT 601 TCCGGCAATG CCAACGCGCA AATGTTTTGC
AGCGGCGCGT CTATCGGGTC 651 GAGCGACTCG TCCAACTATG CCGCCTTCCT
CCGCTACGGC ATCCGTACCA 701 GCCTGCAATC CAAATATGTC TTGCACAACT
TGGGCTTCCG TTGCACAAGC 751 CGATAA
This corresponds to the amino acid sequence <SEQ ID 1498; ORF
525-1>:
TABLE-US-01829 m525-1.pep 1 MKYVRLFFLG AALAGTQAAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GELKQPVTNV SWFAANAYCA AQGKRLPTID
EWEFAGLASA TQKNGSNEPG 151 YNRTILDWYA DGGRKGLHDV GKGRPNYWGV
YDMHGLIWEW TEDFNSSLLS 201 SGNANAQMFC SGASIGSSDS SNYAAFLRYG
IRTSLQSKYV LHNLGFRCTS 251 R* m525-1/g525-1 97.6% identity in 251 aa
overlap 10 20 30 40 50 60 m525-1.pep
MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g525-1
MKYVRLFFLGTALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF 10 20
30 40 50 60 70 80 90 100 110 120 m525-1.pep
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNVSWFAANAYCA
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| g525-1
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNISWFAANAYCA 70 80
90 100 110 120 130 140 150 160 170 180 m525-1.pep
AQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYADGGRKGLHDVGKGRPNYWGV
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| g525-1
AQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYADGGRKGLHDVGKDRPNYWGV 130
140 150 160 170 180 190 200 210 220 230 240 m525-1.pep
YDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSSDSSNYAAFLRYGIRTSLQSKYV
||||||||||||||||||||||||||||||||||:|:||||||||||||||||||||||| g525-1
YDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASVGASDSSNYAAFLRYGIRTSLQSKYV 190
200 210 220 230 240 250 m525-1.pep LHNLGFRCTSRX ||||||||:||| g525-1
LHNLGFRCASRX 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1499>:
TABLE-US-01830 a525-1.seq 1 ATGAAGTTTA CCCGGTTACT CTTTCTCTGT
GCGGCACTCG CCGGCACTCA 51 AGCGGCAGCT GCCGAAATGG TTCAAATCGA
AGGCGGCAGC TACCGCCCGC 101 TTTATCTGAA AAAAGATACC GGCCTGATTA
AAGTCAAACC GTTCAAACTG 151 GATAAATATC CCGTTACCAA TGCCGAGTTT
GCCGAATTTG TCAACAGCCA 201 CCCCCAATGG CAAAAAGGCA GGATCGGTTC
CAAACAGGCA GAACCCGCTT 251 ACCTGAAGCA TTGGATGAAA AACGGCAGCC
GCAGCTATGC GCCGAAGGCG 301 GGCGATTTAA AACAACCGGT AACCAATGTT
TCCTGGTTCG CCGCCAACGC 351 CTATTGCGCC GCACAAGGCA AACGCCTGCC
GACCATTGAC GAATGGGAAT 401 TTGCCGGACT TGCCTCCGCC ACGCAGAAAA
ACGGCTCAAA CGAACCCGGC 451 TACAACCGCA CTATTCTCGA CTGGTATGCG
GATGGCGACC GGAAAGACCT 501 GCACGATGTC GGCAAAGGTC GCCCGAACTA
CTGGGGCGTT TATGATATGC 551 ACGGTCTGAT TTGGGAATGG ACGGAAGATT
TCAACAGCAG CCTGCTTTCT 601 TCCGGCAATG CCAACGCGCA AATGTTTTGC
AGCGGCGCGT CTATCGGGTC 651 GAGCGACTCG TCCAACTATG CCGCCTTCCT
CCGCTACGGC ATCCGCACCA 701 GCCTGCAATC CAAATATGTC TTGCACAACT
TGGGCTTCCG TTGCACAAGC 751 CGATAA
This corresponds to the amino acid sequence <SEQ ID 1500; ORF
525-1.a>:
TABLE-US-01831 a525-1.pep 1 MKFTRLLFLC AALAGTQAAA AEMVQIEGGS
YRPLYLKKDT GLIKVKPFKL 51 DKYPVTNAEF AEFVNSHPQW QKGRIGSKQA
EPAYLKHWMK NGSRSYAPKA 101 GDLKQPVTNV SWFAANAYCA AQGKRLPTID
EWEFAGLASA TQKNGSNEPG 151 YNRTILDWYA DGDRKDLHDV GKGRPNYWGV
YDMHGLIWEW TEDFNSSLLS 201 SGNANAQMFC SGASIGSSDS SNYAAFLRYG
IRTSLQSKYV LHNLGFRCTS 251 R* m525-1/a525-1 97.2% identity in 251 aa
overlap 10 20 30 40 50 60 m525-1.pep
MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF
||::||:|| |||||||||||||||||||||||||||||||||||||||||||||||||| a525-1
MKFTRLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIKVKPFKLDKYPVTNAEF 10 20
30 40 50 60 70 80 90 100 110 120 m525-1.pep
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGELKQPVTNVSWFAANAYCA
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| a525-1
AEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGDLKQPVTNVSWFAANAYCA 70 80
90 100 110 120 130 140 150 160 170 180 m525-1.pep
AQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYADGGRKGLHDVGKGRPNYWGV
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| a525-1
AQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYADGDRKDLHDVGKGRPNYWGV 130
140 150 160 170 180 190 200 210 220 230 240 m525-1.pep
YDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSSDSSNYAAFLRYGIRTSLQSKYV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a525-1
YDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSSDSSNYAAFLRYGIRTSLQSKYV 190
200 210 220 230 240 250 m525-1.pep LHNLGFRCTSRX |||||||||||| a525-1
LHNLGFRCTSRX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1501>:
TABLE-US-01832 g527.seq 1 atggttttac cagtctcctt ttttcagcct
gtccagttgg cggcggtcgc 51 gcttggtcgg tctgccgtcg ggatgggcgg
aagtgatgcg gctgaattgg 101 tcgagctgtt tgcactcttc cctcaatgct
gccgttttcg cgtcttcttc 151 atacagaagc cgcgcctcgg gtgccgggcg
gcgttggtgg ttcaaacctt 201 taaccttgat tttatgggga agggaattga
gcgtcaggtc gataatatcg 251 ccgatgtcta tggttttact gtttttgact
ttcgagccgt ttacttgaac 301 cctacccagt tcgatatgct tttgcgcaag
ggaacgggtc ttgaaaaaac 351 gtgccgccca aagccatttg tccagccgca
tggcggaaga atcgtgcttg 401 tctttcatac gattttgttt gaaataattg
aatttgtttc gagtttagca 451 taa
This corresponds to the amino acid sequence <SEQ ID 1502; ORF
527.ng>:
TABLE-US-01833 g527.pep 1 MVLPVSFFQP VQLAAVALGR SAVGMGGSDA
AELVELFALF PQCCRFRVFF 51 IQKPRLGCRA ALVVQTFNLD FMGKGIERQV
DNIADVYGFT VFDFRAVYLN 101 PTQFDMLLRK GTGLEKTCRP KPFVQPHGGR
IVLVFHTILF EIIEFVSSLA 151 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1503>:
TABLE-US-01834 m527.seq 1 ATGGTTTTAC CAGTCTCCTT TTTTCAGCCT
GTCCAGTTGG CGGCGGTCGC 51 GCTTGGTCGG TCTGCCGTCG GGATAGGCGG
AAGTGATGCG GCTGAATTGG 101 TCGAGCTGTT TGCGCTCTTC CCTCAATGTT
GCCGTTwTCG CGTCCTCTTC 151 ATACAGAAGC CGCGCyTCGG ATGCCGGGCG
GCGTTGGTGG TTCAAACCTT 201 TAACCkTGAT TTTATAGGGA AGGG.AATTk
AgCkTCaGTy GrTwATaTCG 251 CsGATGTmTA TGGTTTTACT GTTTTTGACC
TTCGAGCCGT TTACTTGAAC 301 CCTACCCAGT TCGATGTGCT TTTGCGCAAG
GGAACGGGTC TTGAAAAAAC 351 GTGCCGCCCA AAGCCATTTG TCCAGCCGCA
TGGCGGAAGA ATCGTGCTTG 401 TCTTTCATAC GATTTTGTTT GAAATAATTG
AATTTGTTTC GAGTTTAGCA 451 TAA
This corresponds to the amino acid sequence <SEQ ID 1504; ORF
527>:
TABLE-US-01835 m527pep 1 MVLPVSFFQP VQLAAVALGR SAVGIGGSDA
AELVELFALF PQCCRXRVLF 51 IQKPRXGCRA ALVVQTFNXD FIGKXNXASV
XXIADVYGFT VFDLRAVYLN 101 PTQFDVLLRK GTGLEKTCRP KPFVQPHGGR
IVLVFHTILF EIIEFVSSLA 151 *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 527
shows 90.0% identity over a 150 aa overlap with a predicted ORF
(ORF 527.ng) from N. gonorrhoeae:
TABLE-US-01836 m527/g527 10 20 30 40 50 60 m527.pep
MVLPVSFFQPVQLAAVALGRSAVGIGGSDAAELVELFALFPQCCRXRVLFIQKPRXGCRA
||||||||||||||||||||||||:|||||||||||||||||||| ||:|||||| |||| g527
MVLPVSFFQPVQLAAVALGRSAVGMGGSDAAELVELFALFPQCCRFRVFFIQKPRLGCRA 10 20
30 40 50 60 70 80 90 100 110 120 m527.pep
ALVVQTFNXDFIGKXNXASVXXIADVYGFTVFDLRAVYLNPTQFDVLLRKGTGLEKTCRP
|||||||| ||:|| :| |||||||||||:|||||||||||:|||||||||||||| g527
ALVVQTFNLDFMGKGIERQVDNIADVYGFTVFDFRAVYLNPTQFDMLLRKGTGLEKTCRP 70 80
90 100 110 120 130 140 150 m527.pep KPFVQPHGGRIVLVFHTILFEIIEFVSSLA
|||||||||||||||||||||||||||||| g527 KPFVQPHGGRIVLVFHTILFEIIEFVSSLA
130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1505>:
TABLE-US-01837 a527.seq 1 ATGGTTTTAC CAGTCTCCTT TTTTCAGCCT
GTCCAGTTGG CGGCGGTCGC 51 GCTTGGTCGG TCTGCCGTCG GGATAGGCGG
AAGTGATGCG GCTGAATTGG 101 TCGAGCTGTT TGCGCTCTTC CCTCAATGTT
GCCGTTTTCG CGTCCTCTTC 151 ATACAGAAGC CGCGCCTCGG ATGCCGGGCG
GCGTTGGTGG TTCAAACCTT 201 TAACCTTGAT TTTATAGGGA AGGGAATTGA
GCGTCAGGTC GATAATATCG 251 CCGATGTCTA TGGTTTTACT GTTTTTGACC
TTCGAGCCGT TTACTTGAAC 301 CCTACCCAGT TCGATGTGCT TTTGCGCAAG
GGAACGGGTC TTGAAAAAAC 351 GTGCCGCCCA AAGCCATTTG TCCAGCCGCA
TGGCGGAAGA ATCGTGCTTG 401 TCTTTCATAC GATTTTGTTT GAAATAATTG
AATTTGTTTC GAGTTTAGCA 451 TAA
This corresponds to the amino acid sequence <SEQ ID 1506; ORF
527.a>:
TABLE-US-01838 a527.pep 1 MVLPVSFFQP VQLAAVALGR SAVGIGGSDA
AELVELFALF PQCCRFRVLF 51 IQKPRLGCRA ALVVQTFNLD FIGKGIERQV
DNIADVYGFT VFDLRAVYLN 101 PTQFDVLLRK GTGLEKTCRP KPFVQPHGGR
IVLVFHTILF EIIEFVSSLA 151 * m527/a527 93.3% identity in 150 aa
overlap 10 20 30 40 50 60 m527.pep
MVLPVSFFQPVQLAAVALGRSAVGIGGSDAAELVELFALFPQCCRXRVLFIQKPRXGCRA
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| a527
MVLPVSFFQPVQLAAVALGRSAVGIGGSDAAELVELFALFPQCCRFRVLFIQKPRLGCRA 10 20
30 40 50 60 70 80 90 100 110 120 m527.pep
ALVVQTFNXDFIGKXNXASVXXIADVYGFTVFDLRAVYLNPTQFDVLLRKGTGLEKTCRP
|||||||| ||||| :| |||||||||||||||||||||||||||||||||||||| a527
ALVVQTFNLDFIGKGIERQVDNIADVYGFTVFDLRAVYLNPTQFDVLLRKGTGLEKTCRP 70 80
90 100 110 120 130 140 150 m527.pep KPFVQPHGGRIVLVFHTILFEIIEFVSSLAX
||||||||||||||||||||||||||||||| a527
KPFVQPHGGRIVLVFHTILFEIIEFVSSLAX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1507>:
TABLE-US-01839 g528.seq 1 atggaaattc gggtaataaa atatacggca
acggctgcgt tgtttgcatt 51 tacggttgca ggctgccggc tggcggggtg
gtatgagtgt ttgtccttgt 101 ccggctggtg taagccgaga aaacctgccg
ccatcgattt ttgggatatt 151 ggcggcgaga gtccgctgtc tttagaggac
tacgagatac cgctttcaga 201 cggcaatcgt tccgtcaggg caaacgaata
tgaatccgcg caaaaatctt 251 acttttatag gaaaataggg aagtttgaag
cctgcgggtt ggattggcgt 301 acgcgtgacg gcaaaccttt ggttgagagg
ttcaaacagg aaggtttcga 351 ctgtttggaa aagcaggggt tgcggcgcaa
cggcctgtcc gagcgcgtcc 401 gatggtaa
This corresponds to the amino acid sequence <SEQ ID 1508; ORF
528.ng>:
TABLE-US-01840 g528.pep 1 MEIRVIKYTA TAALFAFTVA GCRLAGWYEC
LSLSGWCKPR KPAAIDFWDI 51 GGESPLSLED YEIPLSDGNR SVRANEYESA
QKSYFYRKIG KFEACGLDWR 101 TRDGKPLVER FKQEGFDCLE KQGLRRNGLS
ERVRW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1509>:
TABLE-US-01841 m528.seq (partial) 1 ATGGAAATTC GGGCAATAAA
ATATACGGCA ATGGCTGCGT TGCTTGCATT 51 TACGGTTGCA GGCTGCCGGC
TGGCGGGGTG GTATGAGTGT TCGTCCCTCA 101 CCGGCTGGTG TAAGCCGAGA
AAACCGGCTG CCATCGATTT TTGGGATATT 151 GGCGGCGAGA GTCCGCCGTC
TTTAGGGGAC TACGAGATAC CGCTTTCAGA 201 CGGCAATAGT TCCGTCAGGG
CAAACGAATA TGAATCCGCA CAACAATCTT 251 ACTTTTACAG GAAAATAGGG
AAGTTTGAAG C.TGCGGGCT GGATTGGCGT 301 ACGCGTGACG GCAAACCTTT
GATTGAGACG TTCAAACAGG GAGGATTTGA 351 CTGCTTGGAA AAG....
This corresponds to the amino acid sequence <SEQ ID 1510; ORF
528>:
TABLE-US-01842 m528.pep (partial) 1 MEIRAIKYTA MAALLAFTVA
GCRLAGWYEC SSLTGWCKPR KPAAIDFWDI 51 GGESPPSLGD YEIPLSDGNS
SVRANEYESA QQSYFYRKIG KFEXCGLDWR 101 TRDGKPLIET FKQGGFDCLE
K....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 528
shows 89.3% identity over a 121 aa overlap with a predicted ORF
(ORF 528.ng) from N. gonorrhoeae:
TABLE-US-01843 m528/g528 10 20 30 40 50 60 m528.pep
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLTGWCKPRKPAAIDFWDIGGESPPSLGD
||||:||||| |||:||||||||||||||| ||:||||||||||||||||||||| || | g528
MEIRVIKYTATAALFAFTVAGCRLAGWYECLSLSGWCKPRKPAAIDFWDIGGESPLSLED 10 20
30 40 50 60 70 80 90 100 110 120 m528.pep
YEIPLSDGNSSVRANEYESAQQSYFYRKIGKFEXCGLDWRTRDGKPLIETFKQGGFDCLE
||||||||| |||||||||||:||||||||||| |||||||||||||:| ||| |||||| g528
YEIPLSDGNRSVRANEYESAQKSYFYRKIGKFEACGLDWRTRDGKPLVERFKQEGFDCLE 70 80
90 100 110 120 m528.pep K | g528 KQGLRRNGLSERVRW
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1511>:
TABLE-US-01844 a528.seq 1 ATGGAAATTC GGGCAATAAA ATATACGGCA
ATGGCTGCGT TGCTTGCATT 51 TACGGTTGCA GGCTGCCGGT TGGCAGGTTG
GTATGAGTGT TCGTCCCTGT 101 CCGGCTGGTG TAAGCCGAGA AAACCTGCCG
CCATCGATTT TTGGGATATT 151 GGCGGCGAGA GTCCTCCGTC TTTAGAGGAC
TACGAGATAC CGCTTTCAGA 201 CGGCAATCGT TCCGTCAGGG CAAACGAATA
TGAATCCGCA CAACAATCTT 251 ACTTTTACAG GAAAATAGGG AAGTTTGAAG
CCTGCGGGTT GGATTGGCGT 301 ACGCGTGACG GCAAACCTTT GATTGAGACG
TTCAAACAGG AAGGTTTTGA 351 TTGTTTGAAA AAGCAGGGGT TGCGGCGCAA
CGGTCTGTCC GAGCGCGTCC 401 GATGGTAA
This corresponds to the amino acid sequence <SEQ ID 1512; ORF
528.a>:
TABLE-US-01845 a528.pep 1 MEIRAIKYTA MAALLAFTVA GCRLAGWYEC
SSLSGWCKPR KPAAIDFWDI 51 GGESPPSLED YEIPLSDGNR SVRANEYESA
QQSYFYRKIG KFEACGLDWR 101 TRDGKPLIET FKQEGFDCLK KQGLRRNGLS ERVRW*
m528/a528 95.0% identity in 121 aa overlap 10 20 30 40 50 60
m528.pep
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLTGWCKPRKPAAIDFWDIGGESPPSLGD
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| | a528
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAAIDFWDIGGESPPSLED 10 20
30 40 50 60 70 80 90 100 110 120 m528.pep
YEIPLSDGNSSVRANEYESAQQSYFYRKIGKFEXCGLDWRTRDGKPLIETFKQGGFDCLE
||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||: a528
YEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTRDGKPLIETFKQEGFDCLK 70 80
90 100 110 120 m528.pep K | a528 KQGLRRNGLSERVRWX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1513>:
[0331] g528-1.seq
TABLE-US-01846 g528-1.seq 1 ATGGAAATTC GGGTAATAAA ATATACGGCA
ACGGCTGCGT TGTTTGCATT 51 TACGGTTGCA GGCTGCCGGC TGGCGGGGTG
GTATGAGTGT TCGTCCTTGT 101 CCGGCTGGTG TAAGCCGAGA AAACCTGCCG
CCATCGATTT TTGGGATATT 151 GGCGGCGAGA GTCCGCTGTC TTTAGAGGAC
TACGAGATAC CGCTTTCAGA 201 CGGCAATCGT TCCGTCAGGG CAAACGAATA
TGAATCCGCG CAAAAATCTT 251 ACTTTTATAG GAAAATAGGG AAGTTTGAAG
CCTGCGGGTT GGATTGGCGT 301 ACGCGTGACG GCAAACCTTT GGTTGAGAGG
TTCAAACAGG AAGGTTTCGA 351 CTGTTTGGAA AAGCAGGGGT TGCGGCGCAA
CGGCCTGTCC GAGCGCGTCC 401 GATGGTAA
This corresponds to the amino acid sequence <SEQ ID 1514; ORF
528-1.ng>:
TABLE-US-01847 g528-1.pep 1 MEIRVIKYTA TAALFAFTVA GCRLAGWYEC
SSLSGWCKPR KPAAIDFWDI 51 GGESPLSLED YEIPLSDGNR SVRANEYESA
QKSYFYRKIG KFEACGLDWR 101 TRDGKPLVER FKQEGFDCLE KQGLRRNGLS
ERVRW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1515>:
TABLE-US-01848 m528-1.seq 1 ATGGAAATTC GGGCAATAAA ATATACGGCA
ATGGCTGCGT TGCTTGCATT 51 TACGGTTGCA GGCTGCCGGC TGGCGGGGTG
GTATGAGTGT TCGTCCCTCA 101 CCGGCTGGTG TAAGCCGAGA AAACCGGCTG
CCATCGATTT TTGGGATATT 151 GGCGGCGAGA GTCCGCCGTC TTTAGGGGAC
TACGAGATAC CGCTTTCAGA 201 CGGCAATCGT TCCGTCAGGG CAAACGAATA
TGAATCCGCA CAACAATCTT 251 ACTTTTACAG GAAAATAGGG AAGTTTGAAG
CCTGCGGGCT GGATTGGCGT 301 ACGCGTGACG GCAAACCTTT GATTGAGACG
TTCAAACAGG GAGGATTTGA 351 CTGCTTGGAA AAGCAGGGGT TGCGGCGCAA
CGGTCTGTCC GAGCGCGTCC 401 GATGGTAA
This corresponds to the amino acid sequence <SEQ ID 1516; ORF
528-1>:
TABLE-US-01849 m528-1.pep.. 1 MEIRAIKYTA MAALLAFTVA GCRLAGWYEC
SSLTGWCKPR KPAAIDFWDI 51 GGESPPSLGD YEIPLSDGNR SVRANEYESA
QQSYFYRKIG KFEACGLDWR 101 TRDGKPLIET FKQGGFDCLE KQGLRRNGLS ERVRW*
g528-1/m528-1 92.6% identity in 135 aa overlap 10 20 30 40 50 60
g528-1.pep
MEIRVIKYTATAALFAFTVAGCRLAGWYECSSLSGWCKPRKPAAIDFWDIGGESPLSLED
||||:||||| |||:||||||||||||||||||:||||||||||||||||||||| || | m528-1
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLTGWCKPRKPAAIDFWDIGGESPPSLGD 10 20
30 40 50 60 70 80 90 100 110 120 g528-1.pep
YEIPLSDGNRSVRANEYESAQKSYFYRKIGKFEACGLDWRTRDGKPLVERFKQEGFDCLE
|||||||||||||||||||||:|||||||||||||||||||||||||:| ||| |||||| m528-1
YEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTRDGKPLIETFKQGGFDCLE 70 80
90 100 110 120 130 g528-1.pep KQGLRRNGLSERVRWX ||||||||||||||||
m528-1 KQGLRRNGLSERVRWX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1517>:
TABLE-US-01850 a528-1.seq 1 ATGGAAATTC GGGCAATAAA ATATACGGCA
ATGGCTGCGT TGCTTGCATT 51 TACGGTTGCA GGCTGCCGGT TGGCAGGTTG
GTATGAGTGT TCGTCCCTGT 101 CCGGCTGGTG TAAGCCGAGA AAACCTGCCG
CCATCGATTT TTGGGATATT 151 GGCGGCGAGA GTCCTCCGTC TTTAGAGGAC
TACGAGATAC CGCTTTCAGA 201 CGGCAATCGT TCCGTCAGGG CAAACGAATA
TGAATCCGCA CAACAATCTT 251 ACTTTTACAG GAAAATAGGG AAGTTTGAAG
CCTGCGGGTT GGATTGGCGT 301 ACGCGTGACG GCAAACCTTT GATTGAGACG
TTCAAACAGG AAGGTTTTGA 351 TTGTTTGAAA AAGCAGGGGT TGCGGCGCAA
CGGTCTGTCC GAGCGCGTCC 401 GATGGTAA
This corresponds to the amino acid sequence <SEQ ID 1518; ORF
528-1.a>:
TABLE-US-01851 a528-1.pep 1 MEIRAIKYTA MAALLAFTVA GCRLAGWYEC
SSLSGWCKPR KPAAIDFWDI 51 GGESPPSLED YEIPLSDGNR SVRANEYESA
QQSYFYRKIG KFEACGLDWR 101 TRDGKPLIET FKQEGFDCLK KQGLRRNGLS ERVRW*
a528-1/m528-1 97.0% identity in 135 aa overlap 10 20 30 40 50 60
a528-1.pep
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAAIDFWDIGGESPPSLED
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| | m528-1
MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLTGWCKPRKPAAIDFWDIGGESPPSLGD 10 20
30 40 50 60 70 80 90 100 110 120 a528-1.pep
YEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTRDGKPLIETFKQEGFDCLK
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||: m528-1
YEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTRDGKPLIETFKQGGFDCLE 70 80
90 100 110 120 130 a528-1.pep KQGLRRNGLSERVRWX ||||||||||||||||
m528-1 KQGLRRNGLSERVRWX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1519>:
TABLE-US-01852 g529.seq (partial) 1 atgacccata tcaaacccgt
cattgccgcg ctcgcactca tcgggcttgc 51 cgcctgctcc ggcagcaaaa
ccgaacagcc caagctcgac taccaaagcc 101 ggtcgcaccg cctgatcaaa
ctcgaagtcc cgcctgattt gaacaacccc 151 gaccaaggca acctctaccg
cctgcctgcc ggttcgggag ccgtccgcgc 201 cggggatttg gaaaaacgcc
gcacacccgc cgtccaacag ccagcggatg 251 ccggaagtat tgaaaagcgt
caaaggcgtc cgcttcgagc ggcgacggca 301 gccaacgcct ggcttgtcgt
tgacggcaaa tcccccgccg aaatctccgc 351 cgctttctg.
This corresponds to the amino acid sequence <SEQ ID 1520; ORF
529.ng>:
TABLE-US-01853 g529.pep (partial) 1 MTHIKPVIAA LALIGLAACS
GSKTEQPKLD YQSRSHRLIK LEVPPDLNNP 51 DQGNLYRLPA GSGAVRAGDL
EKRRTPAVQQ PADAGSIEKR QRRPLRAATA 101 ANAWLVVDGK SPAEISAAF..
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1521>:
TABLE-US-01854 m529.seq 1 ATGACCCATA TCAAACCCGT CATTGCCGCG
CTCGCACTCA TCGGGCTTGC 51 CGCCTGCTCC GGCAGCAAAA CCGAACAGCC
CAAGCTCGAC TACCAAAGCC 101 GGTCGCACCG CCTGATCAAA CTTGAAGTCC
CACCTGATTT GAAAAACGCC 151 GACCAAGGCA ACCTCTACCG CCTGCCTGCC
GGTTCGGGCG CCGTCCGCGC 201 CAGCGATTTG GAAAAACGCC GCACACCCGC
CGTCCAACAG CCTGCCGATG 251 CCGAAGTATT GAAAAGCGTC AAAGGTGTCC
GCCTCGAGCG CGACGGCAGC 301 CAACGCTGGC TCGTTGTCGA CGGCAAGTCT
CCTGCCGAAA TCTGGCCGCT 351 CCTGAAAGCC TTTTGGCAGG AAAACGGCTT
CGACATCAAA TCCGAAGAAC 401 CCGCCATCGG ACAAATGGAA ACCGAGTGGG
CGGAAAACCG CGCCAAAATC 451 CCCCAAGACA GCTTGCGCCG CCTCTTCGAC
AAAGTCGGCT TGGGCGGCAT 501 CTACTCCACC GGCGAGCGCG ACAAATTCAT
CGTCCGTATC GAACAGGGCA 551 AAAACGGCGT TTCCGACATC TTCTTCGCCC
ACAAAGCCAT GAAAGAAGTG 601 TACGGCGGCA AAGACAAAGA CACGACCGTA
TGGCAGCCCT CCCCGTCCGA 651 TCCCAACCTC GAAGCCGCTT TCCTGACGCG
CTTTATGCAA TATTTGGGCG 701 TTGACGGACA GCAGGCGGAA AACGCATCGG
CAAAAAAACC TACCCTTCCC 751 GCCGCCAACG AAATGGCGCG TATCGAAGGC
AAAAGCCTGA TTGTCTTTGG 801 CGACTACGGC AGAAACTGGC GGCGCACCGT
GCTCGCCCTC GACCGCATCG 851 GGCTGACCGT CGTCGGTCAA AACACCGAAC
GCCACGCCTT CCTGGTTCAA 901 AAAGCCCCGA ACGAAAGCAA TGCAGTTACC
GAACAAAAAC CCGGCCTGTT 951 CAAACGCCTG CTGGGCAAAG GCAAAGCGGA
GAAACCTGCC GAACAGCCGG 1001 AACTGATTGT CTATGCAGAA CCTGTCGCCA
ACGGCTCGCG CATCGTCCTG 1051 CTCAACAAAG ACGGCAGCGC ATATGCCGGC
AAAGACGCAT CCGCATTATT 1101 GGGCAAACTC CATTCCGAAC TGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1522; ORF
529>:
TABLE-US-01855 m529.pep 1 MTHIKPVIAA LALIGLAACS GSKTEQPKLD
YQSRSHRLIK LEVPPDLNNP 51 DQGNLYRLPA GSGAVRASDL EKRRTPAVQQ
PADAEVLKSV KGVRLERDGS 101 QRWLVVDGKS PAEIWPLLKA FWQENGFDIK
SEEPAIGQME TEWAENRAKI 151 PQDSLRRLFD KVGLGGIYST GERDKFIVRI
EQGKNGVSDI FFAHKAMKEV 201 YGGKDKDTTV WQPSPSDPNL EAAFLTRFMQ
YLGVDGQQAE NASAKKPTLP 251 AANEMARIEG KSLIVFGDYG RNWRRTVLAL
DRIGLTVVGQ NTERHAFLVQ 301 KAPNESNAVT EQKPGLFKRL LGKGKAEKPA
EQPELIVYAE PVANGSRIVL 351 LNKDGSAYAG KDASALLGKL HSELR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 529
shows 83.5% identity over a 115 aa overlap with a predicted ORF
(ORF 529.ng) from N. gonorrhoeae:
TABLE-US-01856 g529/m529 10 20 30 40 50 60 g529.pep
MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m529
MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA 10 20
30 40 50 60 70 80 90 100 110 120 g529.pep
GSGAVRAGDLEKRRTPAVQQPADAGSIEKRQRRPLRAATAANAWLVVDGKSPAEISAAFX
|||||||:|||||||||||||||| ::: : |: ::: |||||||||||| m529
GSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLER-DGSQRWLVVDGKSPAEIWPLLK 70 80
90 100 110 m529
AFWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDKVGLGGIYSTGERDKFIVR 120
130 140 150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1523>:
TABLE-US-01857 a529.seq 1 ATGACCCATA TCAAACCCGT CATTGCCGCG
CTCGCACTCA TCGGGCTTGC 51 CGCCTGCTCC GGCAGCAAAA CCGAACAGCC
CAAGCTCGAC TACCAAAGCC 101 GGTCGCACCG CCTGATCAAA CTCGAAGTCC
CACCTGATTT GAAAAACGCC 151 GACCAAGGCA ACCTCTACCG CCTGCCTGCC
GGTTCGGGCG CCGTCCGCGC 201 CAGCGATTTG GAAAAACGCC GCACACCCGC
CGTCCAACAG CCTGCCGATG 251 CCGAAGTATT GAAAAGCGTC AAAGGTGTCC
GCCTCGAGCG CGACGGCAGC 301 CAACGCTGGC TCGTTGTCGA CGGCAAGTCT
CATGCCGAAA TCTGGCCGCT 351 CCTGAAAGCC TTTTGGCAGG AAAACGGCTT
CGACATCAAA TCCGAAGAAC 401 CCGCCATCGG ACAAATGGAA ACCGAGTGGG
CGGAAAACCG TGCCAAAATC 451 CCCCAAGACA GCTTGCGCCG CCTATTCGAC
ACAGTCGGTT TGGGCGGCAT 501 CTACTCCACC GGCGAGCGCG ACAAATTCAT
CGTCCGTATC GAACAGGGCA 551 AAAACGGCGT TTCCGACATC TTCTTCGCCC
ACAAAGCCAT GAAAGAAGTG 601 TACGGCGGCA AAGACAAAGA CACGACCGTA
TGGCAGCCCT CCCCGTCCGA 651 TCCCAACCTC GAAGCCGCTT TCCTGACGCG
CTTTATGCAA TATTTGGGCG 701 TTGACGGACA GCAGGCGGAA AACGCATCGG
CAAAAAAACC TACCCTTCCC 751 GCCGCCAACG AAATGGCGCG TATCGAAGGC
AAAAGCCTGA TTGTCTTTGG 801 CGACTACGGC AGAAACTGGC GGCGCACCGC
GCTCGCCCTC GACCGCATCG 851 GGCTGACCGT CGTCGGTCAA AACACCGAAC
GCCACGCTTT CCTGGTTCAA 901 AAAGCCCCGA ACGAAAGCAA TGCAGTTACC
GAACAAAAAC CCGGCCTGTT 951 CAAACGCCTG CTGGGCAAAG GCAAAGCGGA
GAAACCTGCC GAACAGCCGG 1001 AACTGATTGT CTATGCCGAG CCTGTCGCCA
ACGGCTCGCG CATCGTCCTG 1051 CTCAACAAAG ACGGCAGCGC ATATGCCGGC
AAAGACGCAT CCGCATTATT 1101 GGGCAAACTC CATTCCGAAC TGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1524; ORF
529.a>:
TABLE-US-01858 a529.pep 1 MTHIKPVIAA LALIGLAACS GSKTEQPKLD
YQSRSHRLIK LEVPPDLNNP 51 DQGNLYRLPA GSGAVRASDL EKRRTPAVQQ
PADAEVLKSV KGVRLERDGS 101 QRWLVVDGKS HAEIWPLLKA FWQENGFDIK
SEEPAIGQME TEWAENRAKI 151 PQDSLRRLFD TVGLGGIYST GERDKFIVRI
EQGKNGVSDI FFAHKAMKEV 201 YGGKDKDTTV WQPSPSDPNL EAAFLTRFMQ
YLGVDGQQAE NASAKKPTLP 251 AANEMARIEG KSLIVFGDYG RNWRRTALAL
DRIGLTVVGQ NTERHAFLVQ 301 KAPNESNAVT EQKPGLFKRL LGKGKAEKPA
EQPELIVYAE PVANGSRIVL 351 LNKDGSAYAG KDASALLGKL HSELR* m529/a529
99.2% identity in 375 aa overlap 10 20 30 40 50 60 m529.pep
MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a529
MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA 10 20
30 40 50 60 70 80 90 100 110 120 m529.pep
GSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKA
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| a529
GSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLERDGSQRWLVVDGKSHAEIWPLLKA 70 80
90 100 110 120 130 140 150 160 170 180 m529.pep
FWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDKVGLGGIYSTGERDKFIVRI
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| a529
FWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRI 130
140 150 160 170 180 190 200 210 220 230 240 m529.pep
EQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a529
EQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE 190
200 210 220 230 240 250 260 270 280 290 300 m529.pep
NASAKKPTLPAANEMARIEGKSLIVFGDYGRNWRRTVLALDRIGLTVVGQNTERHAFLVQ
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| a529
NASAKKPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQ 250
260 270 280 290 300 310 320 330 340 350 360 m529.pep
KAPNESNAVTEQKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a529
KAPNESNAVTEQKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAG 310
320 330 340 350 360 370 m529.pep KDASALLGKLHSELRX ||||||||||||||||
a529 KDASALLGKLHSELRX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1525>:
TABLE-US-01859 g530.seq 1 atgagtgcga gcgcggcaat gacgggtttg
atatgggtca tcgtgtcatc 51 ctgtgtgatg gatattaaag tgtttgtcat
gttatgccgt ccgaacggtt 101 cagacggcat ggctatattt aaagttgtcc
tgaggctttc agggcggcgc 151 ggacttttgc ctgtccgcct tccgtcagcg
gaacgagcgg caggcgcacg 201 tgcggtccgc atccgcccaa ggcggatacc
gcccatttcg gtgcggcggg 251 actgggttcg cagaacatgg tgtcgtaaat
cggaatcagc cggtcgttga
This corresponds to the amino acid sequence <SEQ ID 1526; ORF
530.ng>:
TABLE-US-01860 g530.pep 1 MSASAAMTGL IWVIVSSCVM DIKVFVMLCR
PNGSDGMAIF KVVLRLSGRR 51 GLLPVRLPSA ERAAGARAVR IRPRRIPPIS
VRRDWVRRTW CRKSESAGR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1527>:
TABLE-US-01861 m530.seq 1 wTGAGTGCGA GCGCGGCAAT GACGGGTyTG
ATATGGGTCA TCGTGTCATC 51 sTGTGTGATG GATATTAAAG TGTyTGTTGC
GwTATGCCGT CCGAACGGTT 101 CGGACGGCAT GGmTATATTT AAAGTTGTCC
TGAGGCTTTC AGGGCGGCGC 151 GGACTkTTGC wTGTCCGTTT yCCGTCAGCG
GAACGAGCGG CAGGCGGACG 201 TGCGGTTCGC ATCTGCCCAg GGCGGATACC
GCCCATTTCG GTGCGGCGGG 251 GCTGGGTTCG CAGAACATGG TGTCGTAAAT
CGGAATCAGT CGGTCGTTGA
This corresponds to the amino acid sequence <SEQ ID 1528; ORF
530>:
TABLE-US-01862 m530.pep 1 XSASAAMTGL IWVIVSSCVM DIKVXVAXCR
PNGSDGMXIF KVVLRLSGRR 51 GLLXVRFPSA ERAAGGRAVR ICPGRIPPIS
VRRGWVRRTW CRKSESVGR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 530
shows 88.8% identity over a 98 aa overlap with a predicted ORF (ORF
530.ng) from N. gonorrhoeae:
TABLE-US-01863 m530/g530 m530.pep
XSASAAMTGLIWVIVSSCVMDIKVXVAXCRPNGSDGMXIFKVVLRLSGRRGLLXVRFPSA 60
||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||:||| g530
MSASAAMTGLIWVIVSSCVMDIKVFVMLCRPNGSDGMAIFKVVLRLSGRRGLLPVRLPSA 60 10
20 30 40 50 60 m530.pep ERAAGGRAVRICPGRIPPISVRRGWVRRTWCRKSESVGR 99
|||||:||||| | ||||||||| ||||||||||||:|| g530
ERAAGARAVRIRPRRIPPISVRRDWVRRTWCRKSESAGR 99
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1529>:
TABLE-US-01864 a530.seq 1 ATGAGTGCGA GCGCGGCAAT GACGGGTTTG
ATATGGGTCA TCGTGTCATC 51 CTGTGTGATG GATATTAAAG TGTTTGTTGC
GTTATGCCGT CCGAACGGTT 101 CGGACGGCAT GGCTATATTT AAAGTTGTCC
TGAGGCTTTC AGGGCGGCGC 151 GGACTTTTGC CTGTCCGCCT TCCGTCAGCG
GAACGAGCGG CAGGCGGACG 201 TGCGGTTCGC ATCTGCCCAG GGCGGATACC
GCCCATTTCG GTGCGGCGGG 251 GCTGGGTTCG CAGAACATGG TGTCGTAAAT
CGGAATCAGC CGGTCGTTGA
This corresponds to the amino acid sequence <SEQ ID 1530; ORF
530.a>:
TABLE-US-01865 a530.pep 1 MSASAAMTGL IWVIVSSCVM DIKVFVALCR
PNGSDGMAIF KVVLRLSGRR 51 GLLPVRLPSA ERAAGGRAVR ICPGRIPPIS
VRRGWVRRTW CRKSESAGR* m530/a530 93.9% identity in 98 aa overlap 10
20 30 40 50 60 m530.pep
XSASAAMTGLIWVIVSSCVMDIKVXVAXCRPNGSDGMXIFKVVLRLSGRRGLLXVRFPSA
||||||||||||||||||||||| || ||||||||| ||||||||||||||| ||:||| a530
MSASAAMTGLIWVIVSSCVMDIKVFVALCRPNGSDGMAIFKVVLRLSGRRGLLPVRLPSA 10 20
30 40 50 60 70 80 90 100 m530.pep
ERAAGGRAVRICPGRIPPISVRRGWVRRTWCRKSESVGRX
||||||||||||||||||||||||||||||||||||:||| a530
ERAAGGRAVRICPGRIPPISVRRGWVRRTWCRKSESAGRX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1531>:
TABLE-US-01866 g531.seq 1 ATGACCGCCC TACTCGTCAT CCTCGCCCTC
GCCCTGATAG CCGTCGGCAC 51 GGCAGGCATC GTCTATCCCG CCCTGCCCGG
CTTGGCATTG ATGTTTGCCG 101 GAACATGGCT GCTTGCCTAT GCCGGCGGCT
ATCAAATCTA CGGCGCAGGC 151 ATCTTGTGGA CGGTCGGACT CATCAGCCTT
GGCGGCATAC TGGCGGACTA 201 TATGGCAGGC ATGTTGGGGG TAAAATACAC
TGGGGCAGGC AAACTCGCCG 251 TCCGAGGTGC ATTGGCCGGC AGCATCATCG
GCATATTTTT CTCCCTTCCC 301 GGACTAATAC TCGGCCCCTT TATCGGCGCG
GCGGCAGGCG AACTGATCGA 351 TCGGCGCAAT ATGCTTCAGG CAGGTAAAGC
GGGCTTGGGT ACGCTGTTGG 401 GGCTTGTCGT CGGCACGGCG TTCAAAATCG
GCTGCGCCGT ATCCATCTTG 451 TTTATCCTGT TGGTGAAATA CATCGCATAC
CTGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1532; ORF
531.ng>:
TABLE-US-01867 g531.pep 1 MTALLVILAL ALIAVGTAGI VYPALPGLAL
MFAGTWLLAY AGGYQIYGAG 51 ILWTVGLISL GGILADYMAG MLGVKYTGAG
KLAVRGALAG SIIGIFFSLP 101 GLILGPFIGA AAGELIDRRN MLQAGKAGLG
TLLGLVVGTA FKIGCAVSIL 151 FILLVKYIAY LF
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1533>:
TABLE-US-01868 m531.seq 1 ATGACCGTAC TGACCGTCAT CCTCGCCCTC
GCCCTGATAG CCGTCGGCAC 51 GGCGGGCATC GTTTaCCCCG CCCTGCCCGG
ATTGGCATTG ATGTTTGCCG 101 GAACATGGCT GCTTGCCTAT GCCGGCGGCT
ACCAAATCTA CGGCGCGGGC 151 GTTTTGTGGA CGGTCGGACT CATCAGCCTT
GCCGGCATAC TGGCGGACTA 201 TGTGGCAGGC ATATGGGGGA CAAAATATAC
CGGAGCGGGC AAGCTCGCCG 251 TTCGCGGCGC ATTGGCCGGC AGCATCATCG
GCATATTTTT CTCCCTTCCC 301 GGACTAATAC TCGGTCCCTT TATCGGCGCG
GCGGCAGGCG AACTGATCGA 351 ACGGCGCAAT ATGCTTCAGG CAGGTAAAGC
GGGCTTGGGT ACGCTGTTGG 401 GGCTTGTCGT CGGCACGGCG TTCAAAATCG
GCTGCGCnGT ATCCATCTTG 451 TTTATCCTGT TGGTGAaATA CATCGCCTAC
CTGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1534; ORF
531>:
TABLE-US-01869 m531.pep 1 MTVLTVILAL ALIAVGTAGI VYPALPGLAL
MFAGTWLLAY AGGYQIYGAG 51 VLWTVGLISL AGILADYVAG IWGTKYTGAG
KLAVRGALAG SIIGIFFSLP 101 GLILGPFIGA AAGELIERRN MLQAGKAGLG
TLLGLVVGTA FKIGCAVSIL 151 FILLVKYIAY LF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 531
shows 94.4% identity over a 162 aa overlap with a predicted ORF
(ORF 531.ng) from N. gonorrhoeae:
TABLE-US-01870 m531/g531 10 20 30 40 50 60 m531.pep
MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGYQIYGAGVLWTVGLISL ||:|
|||||||||||||||||||||||||||||||||||||||||||||:||||||||| g531
MTALLVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGYQIYGAGILWTVGLISL 10 20
30 40 50 60 70 80 90 100 110 120 m531.pep
AGILADYVAGIWGTKYTGAGKLAVRGALAGSIIGIFFSLPGLILGPFIGAAAGELIERRN
:||||||:||: |:||||||||||||||||||||||||||||||||||||||||||:||| g531
GGILADYMAGMLGVKYTGAGKLAVRGALAGSIIGIFFSLPGLILGPFIGAAAGELIDRRN 70 80
90 100 110 120 130 140 150 160 m531.pep
MLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAYLF
|||||||||||||||||||||||||||||||||||||||||| g531
MLQAGKAGLGILLGLVVGTAFKIGCAVSILFILLVKYIAYLF 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1535>:
TABLE-US-01871 a531.seq 1 ATGACCGCCT TGCTCGTCAT CCTCGCCCTC
GCCCTGATAG CCGCCGGTAC 51 GGCGGGCATC GTTTACCCCG CCCTGCCCGG
ATTGGCATTG ATGTTTGCCG 101 GAACCTGGCT GCTCGCCTAC TCCGGCGGCT
ACCAAATCTA CGGCGCGGGC 151 GTTTTGTGGA CGGTCGGACT CATCAGCCTT
GCCGGCATAC TGGCGGACTA 201 TGTGGCAGGC ATATGGGGGA CAAAATATAC
CGGAGCGGGC AAGCTCGCCG 251 TTCGCGGCGC ATTGGCCGGC AGCATCATCG
GCATATTTTT CTCCCTTCCC 301 GGACTAATAC TCGGTCCCTT TATCGGCGCG
GCGGCAGGCG AACTGATCGA 351 ACGGCGCAAT ATGCTTCAGG CAGGTAAAGC
GGGCTTGGGT ACGCTGTTGG 401 GGCTTATCGT CGGTACGGCG TTCAAAATCG
GCTGCGCCGT ATCCATCTTG 451 TTTATCCTGT TGGTGAAATA CATCGCCTAC
CTGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1536; ORF
531.a>:
TABLE-US-01872 a531.pep 1 MTALLVILAL ALIAAGTAGI VYPALPGLAL
MFAGTWLLAY SGGYQIYGAG 51 VLWTVGLISL AGILADYVAG IWGTKYTGAG
KLAVRGALAG SIIGIFFSLP 101 GLILGPFIGA AAGELIERRN MLQAGKAGLG
TLLGLIVGTA FKIGCAVSIL 151 FILLVKYIAY LF* m531/a531 96.9% identity
in 162 aa overlap 10 20 30 40 50 60 m531.pep
MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGYQIYGAGVLWTVGLISL ||:|
|||||||||:|||||||||||||||||||||||||:||||||||||||||||||| a531
MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGYQIYGAGVLWTVGLISL 10 20
30 40 50 60 70 80 90 100 110 120 m531.pep
AGILADYVAGIWGTKYTGAGKLAVRGALAGSIIGIFFSLPGLILGPFIGAAAGELIERRN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a531
AGILADYVAGIWGTKYTGAGKLAVRGALAGSIIGIFFSLPGLILGPFIGAAAGELIERRN 70 80
90 100 110 120 130 140 150 160 m531.pep
MLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAYLFX
|||||||||||||||:||||||||||||||||||||||||||| a531
MLQAGKAGLGTLLGLIVGTAFKIGCAVSILFILLVKYIAYLFX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1537>:
TABLE-US-01873 g532.seq (partial) 1 atggctgaaa caatgaaaaa
acaggcggat tcgcctgatt tggtgtacgg 51 tttggaagac aggccgccgt
tcggtaatgc gctcttgagc gcggttaccc 101 atcttttggc gattttcgtg
ccgatgatta cgcccgcgct gattgtgggc 151 ggcgcgctgg aattgccggt
ggagatgacg gcgtatctgg tgtcgatggc 201 gatggttgcg tcgggtgtcg
gcacttattt gcaggtcaac cgcttcgggt 251 cggtcggctc ggggatgctg
tccatccagc gttaccgtca tgattgcgct 301 cggcgcgggg atgaaagagg
gcggtttgag ...
This corresponds to the amino acid sequence <SEQ ID 1538; ORF
532.ng>:
TABLE-US-01874 g532.pep (partial) 1 MAETMKKQAD SPDLVYGLED
RPPFGNALLS AVTHLLAIFV PMITPALIVG 51 GALELPVEMT AYLVSMAMVA
SGVGTYLQVN RFGSVGSGML SIQRYRHDCA 101 RRGDERGRFE ...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1539>:
TABLE-US-01875 m532.seq 1 ATGAGCGGTC AGTTGGGCAA AGGTGCGGAT
GCGCCTGATT TGGTGTACGG 51 TTTGGAAGAC AGGCCGCCGT TCGGTAATGC
GCTCTTGAGC GCGGTTACCC 101 ATCTTTTGGC GATTTTTGTG CCGATGATTA
CGCCCGCGCT GATTGTGGGC 151 GGCGCGCTGG AATTGCCGGT GGAGATGACG
GCGTATCTCG TGTCGATGGC 201 GATGGTTGCG TCGGGTGTCG GCACTTATTT
GCAGGTCAAC CGCTTCGGGC 251 CGGTCGGTTC GGGGATGCTG TCCATCCAGT
CGGTGAATTT TTCGTTCGTT 301 ACCGTGATGA TTGCGCTGGG CGCGGGGATG
AAAGAGGGCG GTTTGACTAA 351 GGATGCGATG ATTTCGACGC TCTTGGGCGT
ATCGTTTGTC GGCGCGTTTT 401 TGGTGTGTTT CTCGGCGTGG CTTCTGCCGT
ATTTGAAAAA AGTGATTACG 451 CCGACGGTCA GCGGCGTGGT CGTGATGCTC
ATTGGTTTGA GTTTGGTACA 501 CGTCGGCATT ACCGATTTCG GCGGCGGCTT
CGGCGCGAAG GCGGACGGCA 551 CGTTCGGCTC GATGGAAAAC TTGGGGCTGG
CATCGCTGGT GTTGCTGATT 601 GTGTTGGTGT TCAACTGCAT GAAAAACCCG
CTGTTGCGCA TGAGCGGCAT 651 TGCGGTCGGG CTGATTGCCG GCTATATCGT
CGCGCTGTTT TTGGGCAAGG 701 TGGATTTTTC CGCGCTGCAA AACCTGCCGC
TGGTTACGCT GCCCGTACCG 751 TTTAAATACG GTTTTGCTTT CGACTGGCAC
GCGTTTATTG TGGCGGGCGC 801 GATTTTCTTG TTGAGCGTGT TTGAGGCGGT
CGGCGATTTA ACCGCGACGG 851 CAATGGTGTC CGACCAGCCG ATTGAAGGCG
AGGAATACAC CAAACGCCTG 901 CGCGGCGGCG TGTTGGCTGA CGGCTTGGTG
TCGGTGATTG CGACGGCTTT 951 GGGTTCGCTG CCGCTGACGA CGTTTGCGCA
AAACAACGGC GTGATTCAGA 1001 TGACCGGCGT GGCTTCGCGC CATGTGGGCA
AATATATTGC CGTGATTTTG 1051 GTGCTGTTGG GTCTGTTCCC CGTTGTCGGT
CGCGCGTTTA CGACGATTCC 1101 GAGTCCGGTG TTGGGCGGCG CGATGGTTTT
GATGTTCGGC TTAATTGCGA 1151 TTGCGGGCGT GCGGATTTTG GTCAGTCACG
GCATCCGCAG GCGCGAAGCG 1201 GTGATTGCGG CAACGTCGGT CGGTTTGGGC
TTGGGTGTCG CGTTTGAGCC 1251 GGAAGTGTTT AAAAACCTGC CCGTCTTGTT
CCAAAACTCT ATTTCCGCCG 1301 GCGGCATTAC GGCAGTCTTG CTGAATTTGG
TCTTGCCCGA AGATAAAACC 1351 GAGGCGGCGG TCAAGTTTGA TACCGACCAC
TTGGAACACT GA
This corresponds to the amino acid sequence <SEQ ID 1540; ORF
532>:
TABLE-US-01876 m532.pep 1 MSGQLGKGAD APDLVYGLED RPPFGNALLS
AVTHLLAIFV PMITPALIVG 51 GALELPVEMT AYLVSMAMVA SGVGTYLQVN
RFGPVGSGML SIQSVNFSFV 101 TVMIALGAGM KEGGLTKDAM ISTLLGVSFV
GAFLVCFSAW LLPYLKKVIT 151 PTVSGVVVML IGLSLVHVGI TDFGGGFGAK
ADGTFGSMEN LGLASLVLLI 201 VLVFNCMKNP LLRMSGIAVG LIAGYIVALF
LGKVDFSALQ NLPLVTLPVP 251 FKYGFAFDWH AFIVAGAIFL LSVFEAVGDL
TATAMVSDQP IEGEEYTKRL 301 RGGVLADGLV SVIATALGSL PLTTFAQNNG
VIQMTGVASR HVGKYIAVIL 351 VLLGLFPVVG RAFTTIPSPV LGGAMVLMFG
LIAIAGVRIL VSHGIRRREA 401 VIAATSVGLG LGVAFEPEVF KNLPVLFQNS
ISAGGITAVL LNLVLPEDKT 451 EAAVKFDTDH LEH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF532
shows 91.4% identity over a 93 aa overlap with a predicted ORF (ORF
532.ng) from N. gonorrhoeae:
TABLE-US-01877 g532/m532 10 20 30 40 50 60 g532.pep
MAETMKKQADSPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMITPALIVGGALELPVEMT |: : |
||:||||||||||||||||||||||||||||||||||||||||||||||||| m532
MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMITPALIVGGALELPVEMT 10 20
30 40 50 60 70 80 90 100 110 g532.pep
AYLVSMAMVASGVGTYLQVNRFGSVGSGMLSIQRYRHDCARRGDERGRFEX
||||||||||||||||||||||| ||||||||| m532
AYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTVMIALGAGMKEGGLTKDAM 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1541>:
TABLE-US-01878 a532.seq 1 ATGAGCGGTC AGTTGGGCAA AGGTGCGGAT
GCGCCTGATT TGGTGTACGG 51 TTTGGAGGAT AGGCCGCCGT TCGGTAATGC
GCTCTTGAGC GCGGTTACCC 101 ATCTTTTGGC GATTTTTGTG CCGATGATTA
CGCCCGCGCT GATTGTGGGC 151 GGCGCGCTGG AATTGCCGGT GGAGATGACG
GCGTATCTCG TGTCGATGGC 201 GATGGTTGCG TCGGGTGTCG GCACTTATTT
GCAGGTCAAC CGCTTCGGGC 251 CGGTCGGTTC GGGGATGCTG TCCATCCAGT
CGGTGAATTT CTCGTTCGTT 301 ACCGTCATGA TTGCGCTCGG CGCGGGGATG
AAAGAGGGCG GTTTGACTAA 351 GGATGCGATG ATTTCGACGC TCTTGGGCGT
ATCGTTTGTC GGCGCGTTTT 401 TGGTGTGTTT TTCGGCGTGG CTTCTGCCGT
ATTTGAAAAA AGTGATTACG 451 CCGACGGTCA GCGGTGTGGT GGTGATGCTG
ATCGGCTTGA GTTTGGTACA 501 CGTCGGTATT ACCGATTTCG GCGGCGGCTT
CGGCGCAAAG GCGGACGGCA 551 CGTTCGGCTC GATGGAAAAC TTGGGGCTGG
CATCGCTGGT GCTGCTGATT 601 GTGCTGGTGT TCAATTGCAT GAAAAACCCG
CTGCTGCGGA TGAGCGGCAT 651 TGCGGTCGGT CTGATTGCCG GCTATATCGT
CGCGCTGTTT TTGGGCAAGG 701 TGGATTTTTC GGCACTGCAA AACCTGCCGC
TGGTTACGCT GCCCGTACCG 751 TTTAAATATG GTTTTGCTTT TGACTGGCAC
GCATTTATTG TGGCGGGTGC 801 GATTTTCTTG TTGAGCGTGT TTGAGGCGGT
CGGCGATTTG ACGGCGACGG 851 CAATGGTGTC CGACCAGCCG ATTGAAGGCG
AGGAATACAC CAAACGCTTG 901 CGCGGCGGCG TGTTGGCGGA CGGCTTGGTG
TCGGTGATTG CGACGGCTTT 951 GGGTTCGCTG CCGCTGACGA CGTTTGCACA
AAACAACGGC GTGATTCAGA 1001 TGACCGGCGT GGCTTCGCGC CATGTGGGCA
AATATATTGC CGTGATTTTG 1051 GTGCTGTTGG GTCTGTTCCC CGTTGTCGGA
CGCGCGTTTA CGACGATTCC 1101 GAGTCCGGTG TTGGGCGGCG CGATGGTTTT
GATGTTCGGC TTGATTGCGA 1151 TTGCGGGCGT GCGGATTTTG GTCAGCCACG
GCATCCGCAG GCGCGAAGCG 1201 GTAATTGCGG CAACGTCGGT CGGTTTGGGC
TTGGGTGTCG CGTTTGAGCC 1251 GGAAGTGTTT AAAAACCTGC CCGTCTTGTT
CCAAAACTCT ATTTCCGCCG 1301 GCGGCATTAC GGCAGTCTTG CTGAATTTGG
TCTTGCCCGA AGATAAAACC 1351 GAGGCGGCGG TCAAGTTTGA TACCGACCAC
TTGGAACACT GA
This corresponds to the amino acid sequence <SEQ ID 1542; ORF
532.a>:
TABLE-US-01879 a532.pep 1 MSGQLGKGAD APDLVYGLED RPPFGNALLS
AVTHLLAIFV PMITPALIVG 51 GALELPVEMT AYLVSMAMVA SGVGTYLQVN
RFGPVGSGML SIQSVNFSFV 101 TVMIALGAGM KEGGLTKDAM ISTLLGVSFV
GAFLVCFSAW LLPYLKKVIT 151 PTVSGVVVML IGLSLVHVGI TDFGGGFGAK
ADGTFGSMEN LGLASLVLLI 201 VLVFNCMKNP LLRMSGIAVG LIAGYIVALF
LGKVDFSALQ NLPLVTLPVP 251 FKYGFAFDWH AFIVAGAIFL LSVFEAVGDL
TATAMVSDQP IEGEEYTKRL 301 RGGVLADGLV SVIATALGSL PLTTFAQNNG
VIQMTGVASR HVGKYIAVIL 351 VLLGLFPVVG RAFTTIPSPV LGGAMVLMFG
LIAIAGVRIL VSHGIRRREA 401 VIAATSVGLG LGVAFEPEVF KNLPVLFQNS
ISAGGITAVL LNLVLPEDKT 451 EAAVKFDTDH LEH* m532/a532 100.0% identity
in 463 aa overlap 10 20 30 40 50 60 m532.pep
MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMITPALIVGGALELPVEMT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMITPALIVGGALELPVEMT 10 20
30 40 50 60 70 80 90 100 110 120 m532.pep
AYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTVMIALGAGMKEGGLTKDAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
AYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTVMIALGAGMKEGGLTKDAM 70 80
90 100 110 120 130 140 150 160 170 180 m532.pep
ISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVMLIGLSLVHVGITDFGGGFGAK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
ISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVMLIGLSLVHVGILDFGGGFGAK 130
140 150 160 170 180 190 200 210 220 230 240 m532.pep
ADGTFGSMENLGLASLVLLIVLVFNCMKNPLLRMSGIAVGLIAGYIVALFLGKVDFSALQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
ADGTFGSMENLGLASLVLLIVLVFNCMKNPLLRMSGIAVGLIAGYIVALFLGKVDFSALQ 190
200 210 220 230 240 250 260 270 280 290 300 m532.pep
NLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEAVGDLTATAMVSDQPIEGEEYTKRL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
NLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEAVGDLTATAMVSDQPIEGEEYTKRL 250
260 270 280 290 300 310 320 330 340 350 360 m532.pep
RGGVLADGLVSVIATALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAVILVLLGLFPVVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
RGGVLADGLVSVIATALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAVILVLLGLFPVVG 310
320 330 340 350 360 370 380 390 400 410 420 m532.pep
RAFTTIPSPVLGGAMVLMFGLIAIAGVRILVSHGIRRREAVIAATSVGLGLGVAFEPEVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a532
RAFTTIPSPVLGGAMVLMFGLIAIAGVRILVSHGIRRREAVIAATSVGLGLGVAFEPEVF 370
380 390 400 410 420 430 440 450 460 m532.pep
KNLPVLFQNSISAGGITAVLLNLVLPEDKTEAAVKFDTDHLEHX
|||||||||||||||||||||||||||||||||||||||||||| a532
KNLPVLFQNSISAGGITAVLLNLVLPEDKTEAAVKFDTDHLEHX 430 440 450 460
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1543>:
TABLE-US-01880 g535.seq 1 atgccctttc ccgttttcag acaantattt
gcttngtcct tgctacggtt 51 ttttgccgta ggtcggattc tcgaatccga
catttccaac agcggttttt 101 cggaaacgat aaacgcgtca aatgtttttt
ttgtcggata cgaatatccg 151 gcctgcattt caaatttaca tcgcttccaa
tttcgcaaac ttggtatcca 201 gttctttcac gccctgtttg ccgaagttga
tggtcagtcg ggcggattcg 251 cctttgtctg cggcatcgat aatcacgccg
gtgccgaatt tggcgtgacg 301 gacgttttgt ccgatgcgga agcctgcgta
ggtttgcggc tgtttgaagt 351 catcgatgat tttgtcccgt tgtacggtgg
tttggcgcgt gttgccgtag 401 ctgtcgaagg cgggtttttt gacggacagg
tagtgcaata cttctggcgg 451 gatttcttcg acgaagcggg atgcgatgcc
gaattgggtt tgtccgtgca 501 gcatgcgttg ctgtgccatg gtgatgtaga
ggcgtttgcg ggcgcgggtg 551 atggcgacgt acatgaggcg gcgttcttct
tcgaggccgc cgcgctcggc 601 aaggctcatt tcgctgggga aacgcccctc
ttccataccg gtgaggaaga 651 cggcgttgaa ttccaagcct ttggcggcgt
ggacggtcat cagttggacg 701 gctttttcgc ctgcccctgc ttggttttcg
ccggattcga gggcggcgtt 751 gctcaagaag gcgaggatgg ggaaggcggg
atcgtctga
This corresponds to the amino acid sequence <SEQ ID 1544; ORF
535.ng>:
TABLE-US-01881 g535.pep 1 MPFPVFRQXF AXSLLRFFAV GRILESDISN
SGFSETINAS NVFFVGYEYP 51 ACISNLHRFQ FRKLGIQFFH ALFAEVDGQS
GGFAFVCGID NHAGAEFGVT 101 DVLSDAEACV GLRLFEVIDD FVPLYGGLAR
VAVAVEGGFF DGQVVQYFWR 151 DFFDEAGCDA ELGLSVQHAL LCHGDVEAFA
GAGDGDVHEA AFFFEAAALG 201 KAHFAGETPL FHTGEEDGVE FQAFGGVDGH
QLDGFFACPC LVFAGFEGGV 251 AQEGEDGEGG IV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1545>:
TABLE-US-01882 m535.seq 1 aTGCCCTTtC CCGTTTTCAG ACGGCCTTTT
GCTTTGTCCT TACTtACGTT 51 TTTTGCCGTA AGTCAGATTC TTGTATCCGA
CATTTCCAAC AGCGGTGTTT 101 CGGAAACAAT AGACGCGTCA AATGTTTTTG
TCGGATACGA ATATCCGACC 151 TACATTTCAA ATTTACATCT CTTCCAATTT
CGCAAACTTG GTGTCCAACT 201 CTTTCACGCC CTGTTTGCCG AAATTGATGG
TCAGTCGGGC GGATTCGCCT 251 TTATCTGCGG CATCGATAAT CACGCCGGTG
CCGAATTTGG CGTGGCGGAC 301 GTTTTGTCCG ATACGGAAAC CTGCGTAGGT
TTGGGGCTGT TTGTAGTCGT 351 CGATGATTTT ATCTTTGGAT GCGGCGGTTT
GGCGCGTGTT GCCGTAACTG 401 TCGTAGGCAG GCTTTTTGAC GGACAGGTAG
TGCAATACTT CGGGTGGGAT 451 CTCTTCGACG AAGCGGGAGA CGATGCCGAA
TTGGGTTTGT CCGTGCAGCA 501 TGCGTTGTTG CGCCATGGTG ATGTAGAGGC
GTTTGCGGGC GCGGGTGATG 551 GCGACGTACA TGAGGCGGCG TTCTTCTTCG
AGGCCGCCGC GTTCGGCAAG 601 GCTCATTTCG CTGGGGAAGC GGCCTTCTTC
CATGCCGGTG AGGAAGACGG 651 CGTTAAATTC CAAGCCTTTG GCGGCGTGGA
CGGTCATGAG TTGGACGGCC 701 TTTTCGCCTG CGCCTGCCTG GTTTTCACCG
GATTCGAGGG CGGCATTGCT 751 TAGGAAGGCG AGAATGGGGA AGGCGGGGTC
GTCTGA
This corresponds to the amino acid sequence <SEQ ID 1546; ORF
535>:
TABLE-US-01883 m535.pep 1 MPFPVFRRPF ALSLLTFFAV SQILVSDISN
SGVSETIDAS NVFVGYEYPT 51 YISNLHLFQF RKLGVQLFHA LFAEIDGQSG
GFAFICGIDN HAGAEFGVAD 101 VLSDTETCVG LGLFVVVDDF IFGCGGLARV
AVTVVGRLFD GQVVQYFGWD 151 LFDEAGDDAE LGLSVQHALL RHGDVEAFAG
AGDGDVHEAA FFFEAAAFGK 201 AHFAGEAAFF HAGEEDGVKF QAFGGVDGHE
LDGLFACACL VFTGFEGGIA 251 XEGENGEGGV V*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 535
shows 80.9% identity over a 262 aa overlap with a predicted ORF
(ORF 535.ng) from N. gonorrhoeae:
TABLE-US-01884 m535/g535 10 20 30 40 50 59 m535.pep
MPFPVFRRPFALSLLTFFAVSQILVSDISNSGVSETIDASNVF-VGYEYPTYISNLHLFQ
|||||||: || ||| ||||::|| ||||||| ||||:||||| ||||||: ||||| || g535
MPFPVFRQXFAXSLLRFFAVGRILESDISNSGFSETINASNVFFVGYEYPACISNLHRFQ 10 20
30 40 50 60 60 70 80 90 100 110 119 m535.pep
FRKLGVQLFHALFAEIDGQSGGFAFICGIDNHAGAEFGVADVLSDTETCVGLGLFVVVDD
|||||:|:|||||||:|||||||||:|||||||||||||:|||||:|:|||| || |:|| g535
FRKLGIQFFHALFAEVDGQSGGFAFVCGIDNHAGAEFGVTDVLSDAEACVGLRLFEVIDD 70 80
90 100 110 120 120 130 140 150 160 170 179 m535.pep
FIFGCGGLARVAVTVVGRLFDGQVVQYFGWDLFDEAGDDAELGLSVQHALLRHGDVEAFA |:
||||||||:| | :||||||||| |:||||| ||||||||||||| |||||||| g535
FVPLYGGLARVAVAVEGGFFDGQVVQYFWRDFFDEAGCDAELGLSVQHALLCHGDVEAFA 130
140 150 160 170 180 180 190 200 210 220 230 239 m535.pep
GAGDGDVHEAAFFFEAAAFGKAHFAGEAAFFHAGEEDGVKFQAFGGVDGHELDGLFACAC
||||||||||||||||||:||||||||: :||:||||||:||||||||||:|||:||| | g535
GAGDGDVHEAAFFFEAAALGKAHFAGETPLFHTGEEDGVEFQAFGGVDGHQLDGFFACPC 190
200 210 220 230 240 240 250 260 m535.pep LVFTGFEGGIAXEGENGEGGVV
|||:|||||:| |||:||||:| g535 LVFAGFEGGVAQEGEDGEGGIV 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1547>:
TABLE-US-01885 a535.seq (partial) 1 TTCAGACGGC CTTTTGCCTT
GTCCTTGCTA CAGTTTTTTG CCATAGGTCG 51 GATTCTCGAA TCCGACATTT
CCAACAGCGG TTTTTCGGAA ACGATAGACG 101 CGTCAAATAT TTTTGTCGGA
TACGAGTATC CAGCCTGCAT TTCAAATTTA 151 CATCGCTTCC AATTTCGCAA
ACTTGGTGTC CAACTCTTTC ACGCCCTGTT 201 TGCCGAAATT GATGGTCAGT
CGGGCGGATT CGCCTTTATC TGCGGCATCG 251 ATAATCACGC CGGTGCCGAA
TTTGGCGTGG CGGACGTTTT GTCCGATACG 301 GAAACCTGCG TAGGTTTGGG
GCTGTTTGTA GTCGTCGATG ATTTTGTCTT 351 TGGGCGCGGC GGTTTGGCGC
GTGTTGCCAT AGCGGTCGTA GGCGGGTTTT 401 TTGACGGACA GGTAGTGCAA
TACTTCGGGC GGGATTTCTT CGACGAAGCG 451 GGAGACGATG CCGAATTGGG
TTTGTCCGTG CAGCATGCGT TGTTGCGCCA 501 TGGTGATGTA GAGGCGTTTG
CGGGCGCGGG TGATGGCGAC GTACATCAGG 551 CGGCGTTCTT CTTCGAGGCC
GCCGCGTTCG GCAAGGCTCA TTTCGCTGGG 601 GAAGCGGCCT TCTTCCATGC
CGGTGAGGAA TACGGCGTTA AATTCCAAGC 651 CTTTGGCGGC GTGCACGGTC
ATGAGTTGTA CGGCTTTTTC GCCCGCGCCT 701 GCTTGGTTTT CGCCGGATTC
GAGAGCAGCA TTGCTTAGGA AAGCGAGGAT 751 GGGGAAGGCG GGGTCGTCTG A
This corresponds to the amino acid sequence <SEQ ID 1548; ORF
535.a>:
TABLE-US-01886 a535.pep (partial) 1 FRRPFALSLL QFFAIGRILE
SDISNSGFSE TIDASNIFVG YEYPACISNL 51 HRFQFRKLGV QLFHALFAEI
DGQSGGFAFI CGIDNHAGAE FGVADVLSDT 101 ETCVGLGLFV VVDDFVFGRG
GLARVAIAVV GGFFDGQVVQ YFGRDFFDEA 151 GDDAELGLSV QHALLRHGDV
EAFAGAGDGD VHQAAFFFEA AAFGKAHFAG 201 EAAFFHAGEE YGVKFQAFGG
VHGHELYGFF ARACLVFAGF ESSIA*ESED 251 GEGGVV* m535/a535 88.7%
identity in 256 aa overlap 10 20 30 40 50 60 m535.pep
MPFPVFRRPFALSLLTFFAVSQILVSDISNSGVSETIDASNVFVGYEYPTYISNLHLFQF
|||||||||| |||:::|| ||||||| ||||||||:|||||||: ||||| ||| a535
FRRPFALSLLQFFAIGRILESDISNSGFSETIDASNIFVGYEYPACISNLHRFQF 10 20 30 40
50 70 80 90 100 110 120 m535.pep
RKLGVQLFHALFAEIDGQSGGFAFICGIDNHAGAEFGVADVLSDTETCVGLGLFVVVDDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a535
RKLGVQLFHALFAEIDGQSGGFAFICGIDNHAGAEFGVADVLSDTETCVGLGLFVVVDDF 60 70
80 90 100 110 130 140 150 160 170 180 m535.pep
IFGCGGLARVAVTVVGRLFDGQVVQYFGWDLFDEAGDDAELGLSVQHALLRHGDVEAFAG :||
|||||||::||| :|||||||||| |:||||||||||||||||||||||||||||| a535
VFGRGGLARVAIAVVGGFFDGQVVQYFGRDFFDEAGDDAELGLSVQHALLRHGDVEAFAG 120
130 140 150 160 170 190 200 210 220 230 240 m535.pep
AGDGDVHEAAFFFEAAAFGKAHFAGEAAFFHAGEEDGVKFQAFGGVDGHELDGLFACACL
|||||||:||||||||||||||||||||||||||| |||||||||| |||| |:|| ||| a535
AGDGDVHQAAFFFEAAAFGKAHFAGEAAFFHAGEEYGVKFQAFGGVHGHELYGFFARACL 180
190 200 210 220 230 250 260 m535.pep VFTGFEGGIAXEGENGEGGVVX
||:|||::||||:|:||||||| a535 VFAGFESSIAXESEDGEGGVVX 240 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1549>:
TABLE-US-01887 g537.seq 1 atgaaatccc tttttatttg gctgcttcta
ttgggctcgg cggcaggcgt 51 tttctaccat acccaaaacc aatccctgcc
cgcgggcgaa cttgtctatc 101 cgtccgcacc gcaaatcagg gacggcggcg
atgcgctgca ctacctcaac 151 cgcatccgca cacaaatcgg tttgcacgcg
ctggcacacg cgccggtttt 201 ggaaaattcc gcccgcaggc acgcacgcta
tctcacgctc aatcccgaag 251 acggacacgg cgaacaccat cccgacaatc
cgcactacac cgcacaaaag 301 ctgaccgaac gcacacgcct tgccgggtat
ctctacaacg gcgtgcatga 351 aaacatcagc acggaagagg aagccgccga
atcgtccgac agcgacatcc 401 gcacgcagca acgccaagtg gacgctttga
tgagcgcaat ctaccaccgc 451 ctttcgctgc ttgaccgcca taccgacgaa
gcaggtgcgg catttgtgcg 501 cgaaaacggc aaaaccgtcc tcgtattcaa
tcagggcaac ggcagcttcg 551 agcgcgcctg tgcaaaagga aggcggcagc
cggaagcagg acggaaatat 601 taccgcaacg cttgccacaa cggtgcggcc
gtttatgctg acgaagccat 651 gcccgtaacg gaattgcttt ataccgccta
tccggttggc ggcggcgcgc 701 tgccttattt ttacggggaa cgtcccgacc
ccgtgccgga atatgaaatc 751 acaggcaatc ctgccagcat tgatttttcc
gaggcggcag gcaaaattgc 801 gatgaaaagt ttcaagctgt atcagggtaa
aaacgaaatc cgccccgtca 851 gggttttaac cgccggcaac gaccctaacg
gcaggctgac cgcgcaccaa 901 ttcgcccttt tcccgctcaa acctttggaa
tacggcacgc tttatacggc 951 ggtattcgac tatgtccgca acggacggca
cgcgcaggcg aaatggcagt 1001 ttagaacccg aaaacccgat tacccttatt
ttgaggtaaa cggcggcgag 1051 acacttgcgg ttagaaaagg cgaaaaatat
ttcatccact ggcgcggacg 1101 ctggtgtctg gaagcgtgta cccgttatac
ctaccggcgg cagttcggca 1151 acagcctgtc catactccgg cacgaagcgg
gcggcattgt cttcagcgtc 1201 agcggaatgg cgggaagccg catcaggctt
actccggaag acagcccgga 1251 acgcggtgta accctttatt tgcaggattg a
This corresponds to the amino acid sequence <SEQ ID 1550; ORF
537.ng>:
TABLE-US-01888 g537.pep 1 MKSLFIWLLL LGSAAGVFYH TQNQSLPAGE
LVYPSAPQIR DGGDALHYLN 51 RIRTQIGLHA LAHAPVLENS ARRHARYLTL
NPEDGHGEHH PDNPHYTAQK 101 LTERTRLAGY LYNGVHENIS TEEEAAESSD
SDIRTQQRQV DALMSAIYHR 151 LSLLDRHTDE AGAAFVRENG KTVLVFNQGN
GSFERACAKG RRQPEAGRKY 201 YRNACHNGAA VYADEAMPVT ELLYTAYPVG
GGALPYFYGE RPDPVPEYEI 251 TGNPASIDFS EAAGKIAMKS FKLYQGKNEI
RPVRVLTAGN DPNGRLTAHQ 301 FALFPLKPLE YGTLYTAVFD YVRNGRHAQA
KWQFRTRKPD YPYFEVNGGE 351 TLAVRKGEKY FIHWRGRWCL EACTRYTYRR
QFGNSLSILR HEAGGIVFSV 401 SGMAGSRIRL TPEDSPERGV TLYLQD *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1551>:
TABLE-US-01889 m537.seq (partial) 1 ATGAAATCCC TTTTTATTCG
GCTGCTCCTG TTGGGTTCGG CGGCAGGCGT 51 TTTCTACCAT ACCCAAAmCC
AATCCCTGCC CGCGGGCGAA CTTGTCTATC 101 CGTCCGCACC GCAAATCAGG
GACGGCGGCG ATGCGCTGCA CTACCTCAAC 151 CGCATCCGAG CCCAAATCGG
TTTGCACAAG CTGGCACACG CGCCGGTTTT 201 GGAAAACTCC GCCCGCAgGC
ACGCAAGCTA CCTCACGCTC AATCCCGAAG 251 ACGGACACGG CGAACACCAT
CCCGACAATC CGCACTACAC CGCACAAAAG 301 CTGACCGAAC GCACACGCCT
TGCCGGGTAT CTCTACAACG GCGTGCATGA 351 AAACATCAGC ACGGAAGAAG
AAGCCGCCGA ATCGTCCGAC AGCGACATCC 401 GCACGCAGCA ACGCCAAGTG
GACGGATTAA TGAGCGCAAT CTACCACCGC 451 CTTTCCCTAC TTGACCGCCA
TACGGATGAG TCAGGAGCGG CATT...
This corresponds to the amino acid sequence <SEQ ID 1552; ORF
537>:
TABLE-US-01890 m537.pep (partial) 1 MKSLFIRLLL LGSAAGVFYH
TQXQSLPAGE LVYPSAPQIR DGGDALHYLN 51 RIRAQIGLHK LAHAPVLENS
ARRHASYLTL NPEDGHGEHH PDNPHYTAQK 101 LTERTRLAGY LYNGVHENIS
TEEEAAESSD SDIRTQQRQV DGLMSAIYHR 151 LSLLDRHTDE SGAA...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 537
shows 95.7% identity over a 164 aa overlap with a predicted ORF
(ORF 537.ng) from N. gonorrhoeae:
TABLE-US-01891 m537/g537 10 20 30 40 50 60 m537.pep
MKSLFIRLLLLGSAAGVFYHTQXQSLPAGELVYPSAPQIRDGGDALHYLNRIRAQIGLHK ||||||
||||||||||||||| ||||||||||||||||||||||||||||||:||||| g537
MKSLFIWLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGDALHYLNRIRTQIGLHA 10 20
30 40 50 60 70 80 90 100 110 120 m537.pep
LAHAPVLENSARRHASYLTLNPEDGHGEHHPDNPHYTAQKLTERTRLAGYLYNGVHENIS
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| g537
LAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLTERTRLAGYLYNGVHENIS 70 80
90 100 110 120 130 140 150 160 m537.pep
TEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDESGAA
|||||||||||||||||||||:||||||||||||||||||:||| g537
TEEEAAESSDSDIRTQQRQVDALMSAIYHRLSLLDRHTDEAGAAFVRENGKTVLVFNQGN 130
140 150 160 170 180 g537
GSFERACAKGRRQPEAGRKYYRNACHNGAAVYADEAMPVTELLYTAYPVGGGALPYFYGE 190
200 210 220 230 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1553>:
TABLE-US-01892 a537.seq 1 ATGAAATCCC TTTTTATTCG GCTGCTCCTG
TTGGGTTCGG CGGCCGGCGT 51 TTTCTATCAT ACCCAAAACC AATCCCTGCC
CGCGGGCGAA CTTGTCTATC 101 CGTCCGCACC GCAAATCAGG GACGGCGGCG
ATGCGCTGCA CTACCTCAAC 151 CGCATCCGCG CCCAAATCGG TTTGCACAAG
CTGGCACACG CGCCGGTTTT 201 GGAAAATTCC GCCCGCAGGC ACGCACGCTA
TCTCACGCTC AATCCCGAAG 251 ACGGACACGG CGAACACCAT CCCGACAATC
CGCACTACAC CGCACAAAAG 301 CTGACCGAAC GCACACGCCT TGCCGGGTAT
CTCTACAACG GCGTGCATGA 351 AAACATCAGC ACGGAAGAGG AAGCCGCCGA
ATCGTCCGAC AGCGACATCC 401 GCACGCAGCA ACGCCAAGTG GACGGATTAA
TGAGCGCAAT CTACCACCGC 451 CTTTCCCTAC TTGACCGCCA TACGGATGAG
GCAGGAGCGG CATTTGTGCG 501 CGAAAACGGT AAAACCGTTC TCGTATTCAA
TCAGGGCAAC GGCAGGTTTG 551 AGCGGCATTG CGCCCAAGGC AGAAATCAGC
CGGAAGCAGG ACGGAAATAT 601 TACCGCAACG CCTGCCATAA CGGTGCGGTC
GTGTACACCG ACGAAGCCAT 651 GCCCGCACAG GAGCTGCTCT ATACAGCCTA
TCCCGTCGGC AACGGCGCAC 701 TGCCTTATTT CCACGGCGAG CGTCCAGACC
CCGTGCCGGA ATATGAAATC 751 ACGGGCAATC CTGCCAGCAT TGATTTTTCC
GAGGCGGCAG GCAAAATTAC 801 GATGAAAAGT TTCAAGCTGT ATCAGGGTAA
AAACGAAATC CGCCCCGTCA 851 GGGTTTTAAC CGCCGGCAAC GACCCCAACG
GCAGGCTGAC CGCGTACCAA 901 TTCGCGCTTT TCCCGCTCAA GCCTTTGGAA
TACGGTACGC TTTATACGGC 951 GGTATTCGAC TATGTCCGCA ACGGACGGCG
CGCGCAGGCG AAATGGCAGT 1001 TTAGAACCCG AAAACCCGAT TACCCTTATT
TTGAGGTAAA CGGCGGCGAG 1051 ACACTTGCGG TTAGAAAAGG CGAAAAATAT
TTCATCCACT GGCGCGGACG 1101 CTGGTGTTTG GAAGCGTGTA CCCGTTATAC
CTACCGGCAG CGACCCGGCA 1151 GCCGCCTGTC CATAGGAAGG CACAAGGCGG
GCGGCATCGT CTTCAGCGTT 1201 GACGGAATGG CGGGCAGCCG CATCACGCTT
GCACCGGAAG GAGAAACGGA 1251 ACGAGGCGTA ACCCTTTATT TACAGGATTG A
This corresponds to the amino acid sequence <SEQ ID 1554; ORF
537.a>:
TABLE-US-01893 a537.pep 1 MKSLFIRLLL LGSAAGVFYH TQNQSLPAGE
LVYPSAPQIR DGGDALHYLN 51 RIRAQIGLHK LAHAPVLENS ARRHARYLTL
NPEDGHGEHH PDNPHYTAQK 101 LTERTRLAGY LYNGVHENIS TEEEAAESSD
SDIRTQQRQV DGLMSAIYHR 151 LSLLDRHTDE AGAAFVRENG KTVLVFNQGN
GRFERHCAQG RNQPEAGRKY 201 YRNACHNGAV VYTDEAMPAQ ELLYTAYPVG
NGALPYFHGE RPDPVPEYEI 251 TGNPASIDFS EAAGKITMKS FKLYQGKNEI
RPVRVLTAGN DPNGRLTAYQ 301 FALFPLKPLE YGTLYTAVFD YVRNGRRAQA
KWQFRTRKPD YPYFEVNGGE 351 TLAVRKGEKY FIHWRGRWCL EACTRYTYRQ
RPGSRLSIGR HKAGGIVFSV 401 DGMAGSRITL APEGETERGV TLYLQD* m537/a537
98.2% identity in 164 aa overlap 10 20 30 40 50 60 m537.pep
MKSLFIRLLLLGSAAGVFYHTQXQSLPAGELVYPSAPQIRDGGDALHYLNRIRAQIGLHK
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| a537
MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGDALHYLNRIRAQIGLHK 10 20
30 40 50 60 70 80 90 100 110 120 m537.pep
LAHAPVLENSARRHASYLTLNPEDGHGEHHPDNPHYTAQKLTERTRLAGYLYNGVHENIS
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a537
LAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLTERTRLAGYLYNGVHENIS 70 80
90 100 110 120 130 140 150 160 m537.pep
TEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDESGAA
||||||||||||||||||||||||||||||||||||||||:||| a537
TEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDEAGAAFVRENGKTVLVFNQGN 130
140 150 160 170 180 a537
GRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMPAQELLYTAYPVGNGALPYFHGE 190
200 210 220 230 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1555>:
TABLE-US-01894 g538.seq 1 atgtcaggta gaacaggacg gaacagtgcc
actcaggcgc aaccggaacg 51 cgtcatgctg gtgggcgtaa tgttggataa
agatgatacg ggcagcaatg 101 ccgcccgtct gaacggtttt cagacggcat
tggcggaagc cgtcgagctg 151 gtcaaagcgg cgggcggcga ttccgtacgc
gtggagactg ccaaacgcga 201 ccgcccgcac actgcgctgt ttgtcggcac
gggcaaggcg gcggagctgt 251 cggaagcagt tgccgcagac ggcattgatt
tggtcgtatt caaccacgaa 301 cttactccca cgcaggaacg caatttggaa
aaaatcctcc aatgccgcgt 351 attggacaga gtggggctga ttctggcgat
tttcgcccgc cgcgcccgca 401 cgcaggaagg caggctgcaa gtcgagttgg
cgcaattgag ccatttggcg 451 ggacgcttga tacgcggtta cggacatttg
caaagccagc gcggcggtat 501 cggcatgaaa gggccgggcg aaaccaaact
ggaaaccgac cgccgattaa 551 ccgcccatcg gatcaacgcc ttgaaaaaac
agcttgccaa cctcaaaaaa 601 cagcgcgccc tgcgccgcaa gtcccgcgag
tcgggcagaa tcaaaacgtt 651 tgcgctggtc ggctatacca atgtcggcaa
atccagcctg ttcaaccggc 701 tgaccaagtc gggcatatat gcgaaagacc
agcttttcgc cactctcgac 751 acgacggcgc ggcggctgta catcagtccc
gcatgcagca ttatcctgac 801 cgataccgtc ggattcgtca gcgatctgcc
gcacaaactg atttccgcct 851 tttccgccac cttggaagaa accgtgcaag
ccgatgtgct gctgcacgtc 901 gtcgatgctg ccgcccggaa cagcgggcag
cagattgaag acgtggaaaa 951 cgtactgcaa gaaatccatg cccacgatat
tccgtgcatc aaggtgtaca 1001 acaaaaccga cctgctgccg tctgaagaac
aaaacacggg catatggcgc 1051 gacgctgcgg gaaaaattgc cgccgtccgc
atttccgttg ctgaaaatac
This corresponds to the amino acid sequence <SEQ ID 1556; ORF
538.ng>:
TABLE-US-01895 g538.pep 1 MSGRTGRNSA TQAQPERVML VGVMLDKDDT
GSNAARLNGF QTALAEAVEL 51 VKAAGGDSVR VETAKRDRPH TALFVGTGKA
AELSEAVAAD GIDLVVFNHE 101 LTPTQERNLE KILQCRVLDR VGLILAIFAR
RARTQEGRLQ VELAQLSHLA 151 GRLIRGYGHL QSQRGGIGMK GPGETKLETD
RRLTAHRINA LKKQLANLKK 201 QRALRRKSRE SGRIKTFALV GYTNVGKSSL
FNRLTKSGIY AKDQLFATLD 251 TTARRLYISP ACSIILTDTV GFVSDLPHKL
ISAFSATLEE TVQADVLLHV 301 VDAAARNSGQ QIEDVENVLQ EIHAHDIPCI
KVYNKTDLLP SEEQNTGIWR 351 DAAGKIAAVR ISVAENTGID ALREAIAEYC
AAAPNTDETE MP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1557>:
TABLE-US-01896 m538.seq 1 ATGACAGGCA GAACAGGCGG CAACGGCAGT
ACCCAAGCGC AACCCGAACG 51 CGTCATGCTG GTGGGCGTAA TGTTGGACAA
AGATGGTACG GGCAGTAGTG 101 CCGCCCGTCT GAACGGTTTT CAGACGGCAT
TGGCGGAAGC TGTCGAGCTG 151 GTCAAAGCGG CGGGCGGCGA TTCCGTGCGC
GTGGAGACTG CCAAACGCGA 201 CCGTCCGCAC ACCGCGCTGT TTGTCGGCAC
GGGCAAGGCG GCGGAGCTGT 251 CAGAAGCAGT TGCCGCAGAC GGCATCGATT
TGGTCGTATT CAACCACGAA 301 CTCACGCCCA CGCAGGAACG CAACCTTGAA
AAAGAACTsA AATGCCGCGT 351 ATTGGACAGG GTAGGGCTGA TTCTGGCGAT
TTTCGCTCGC CGCGCCCGCA 401 CGCAGGAAGG CAGGCTGCAA GTCGAGTTGG
CGCAATTGAG CCATTTGGCG 451 GGACGCTTGA TACGCGGTTA CGGCCATCTG
CAGAGCCAGC GCGGCGGTAT 501 CGGCATGAAA GGCCCCGGCG AAACCAAACT
GGAAACCGAC CGCCGATTGA 551 TCGCCCATCG GATCAATGCC TTGATAAAAC
AGCTTGCCAA CCTCAAAAAA 601 CAGCGCGCCC TGCGCCGCAA GTCnCGCGAA
TCGGGCACAA TCAAAACGTT 651 TGCGCTGGTC GGCTATACAA ATGTCGGAAA
ATCCAGCCTG TTCAACCGGC 701 TGACAAAGTC GGGCATATAT GCAAAGGACA
AGCTTAGTCC CGAATGCAGC 751 ATTATCCTGA CCGATACCGT CGGATTCGTn
AGCGATCTGC CGCAcAAACT 801 GATTTCCGCC TTTTCgCC.A CGCTGGAAGA
AACCGCGCAA GCCGATGTGC 851 TGCTGCACGT CGTCGATGCC GCCGCTCCGA
ACAGCGGACA GCAGATTGAA 901 GACGTGGAAA ACGTACTGCA AGAAATCCAT
GCCGGCGATA TTCCGTGCAT 951 cAAGGTGTAC AACAAAACCG ACCTGCTGCC
GTCTGAAGAA CAAAACACGG 1001 GCATATGGCG CGACGCTGCG GGAAAAATTG
CCGCCGTCCG CATTTCCGTT 1051 GCTGAAAATA CCGGTATAGA CGCACTGCGC
GAAGCcATTG CCGAGTCTTG 1101 TGCCGCCGCA CCAAACACAG ACGAAACCGA
AATGCCATGA
This corresponds to the amino acid sequence <SEQ ID 1558; ORF
538>:
TABLE-US-01897 m538.pep 1 MTGRTGGNGS TQAQPERVML VGVMLDKDGT
GSSAARLNGF QTALAEAVEL 51 VKAAGGDSVR VETAKRDRPH TALFVGTGKA
AELSEAVAAD GIDLVVFNHE 101 LTPTQERNLE KELKCRVLDR VGLILAIFAR
RARTQEGRLQ VELAQLSHLA 151 GRLIRGYGHL QSQRGGIGMK GPGETKLETD
RRLIAHRINA LIKQLANLKK 201 QRALRRKSRE SGTIKTFALV GYTNVGKSSL
FNRLTKSGIY AKDKLSPECS 251 IILTDTVGFV SDLPHKLISA FSXTLEETAQ
ADVLLHVVDA AAPNSGQQIE 301 DVENVLQEIH AGDIPCIKVY NKTDLLPSEE
QNTGIWRDAA GKIAAVRISV 351 AENTGIDALR EAIAESCAAA PNTDETEMP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 538
shows 92.1% identity over a 392 aa overlap with a predicted ORF
(ORF 538.ng) from N. gonorrhoeae:
TABLE-US-01898 m538/g538 10 20 30 40 50 60 m538.pep
MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTALAEAVELVKAAGGDSVR |:||||
|::|||||||||||||||||| |||:||||||||||||||||||||||||||| g538
MSGRTGRNSATQAQPERVMLVGVMLDKDDTGSNAARLNGFQTALAEAVELVKAAGGDSVR 10 20
30 40 50 60 70 80 90 100 110 120 m538.pep
VETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELTPTQERNLEKELKCRVLDR
||||||||||||||||||||||||||||||||||||||||||||||||||| |:|||||| g538
VETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELTPTQERNLEKILQCRVLDR 70 80
90 100 110 120 130 140 150 160 170 180 m538.pep
VGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHLQSQRGGIGMKGPGETKLETD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g538
VGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHLQSQRGGIGMKGPGETKLETD 130
140 150 160 170 180 190 200 210 220 230 240 m538.pep
RRLIAHRINALIKQLANLKKQRALRRKSRESGTIKTFALVGYTNVGKSSLFNRLTKSGIY |||
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| g538
RRLTAHRINALKKQLANLKKQRALRRKSRESGRIKTFALVGYTNVGKSSLFNRLTKSGIY 190
200 210 220 230 240 250 260 270 280 m538.pep
AKDKL-------------SPECSIILTDTVGFVSDLPHKLISAFSXTLEETAQADVLLHV |||:|
|| |||||||||||||||||||||||| |||||:|||||||| g538
AKDQLFAILDTTARRLYISPACSIILTDTVGFVSDLPHKLISAFSATLEETVQADVLLHV 250
260 270 280 290 300 290 300 310 320 330 340 m538.pep
VDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYNKTDLLPSEEQNTGIWRDAAGKIAAVR |||||
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| g538
VDAAARNSGQQIEDVENVLQEIHAHDIPCIKVYNKTDLLPSEEQNTGIWRDAAGKIAAVR 310
320 330 340 350 360 350 360 370 380 m538.pep
ISVAENTGIDALREAIAESCAAAPNTDETEMPX |||||||||||||||||| ||||||||||||||
g538 ISVAENTGIDALREAIAEYCAAAPNTDETEMPX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1559>:
TABLE-US-01899 a538.seq 1 ATGACAGGCA GAACAGGCCG CAACGGCAGT
ACCCAAGCGC AACCCGAACG 51 CGTCATGCTG GTGGGCGTAA TGTTGGACAA
AGATGGTACG GGCAGCAGTG 101 CCACCCGTCT GAACGGTTTT CAGACGGCAT
TGGCGGAAGC TGTCGAGCTG 151 GTCAAAGCGG CGGGCGGCGA TTCCGTGCGC
GTGGAGACTG CCAAACGCGA 201 CCGTCCGCAC ACCGCGCTGT TTGTCGGCAC
GGGCAAGGCG GCGGAGCTGT 251 CGGAAGCAGT TGCCGCAGAC GGCATCGATT
TGGTCGTATT CAACCACGAA 301 CTTACGCCCA CGCAGGAACG CAATTTGGAA
AAAATCCTCC AATGCCGCGT 351 ATTGGACAGA GTGGGGCTGA TTCTGGCGAT
TTTCGCCCGC CGCGCCCGCA 401 CGCAGGAAGG CAGGCTGCAA GTCGAGTTGG
CACAATTGAG CCATTTGGCG 451 GGACGCTTGA TACGCGGTTA CGGCCATCTG
CAGAGCCAGC GCGGCGGTAT 501 CGGCATGAAA GGCCCCGGCG AAACCAAACT
GGAAACCGAC CGCCGATTGA 551 TCGCCCATCG GATCAATGCC TTGAAAAAAC
AGCTTGCCAA CCTCAAAAAA 601 CAGCGCGCCC TGCGCCGCAA GTCCCGCGAA
TCGGGCACAA TCAAAACGTT 651 TGCGCTGGTC GGCTATACCA ATGTCGGCAA
ATCCAGTCTG TTCAACCGGC 701 TGACCAAGTC GGGCATATAT GCGAAAGACC
AGCTTTTCGC CACACTCGAC 751 ACGACGGCGC GGCGGCTGTA CATCAGTCCC
GAATGCAGCA TTATCCTGAC 801 CGATACCGTC GGATTCGTCA GCGATCTGCC
GCACAAACTG ATTTCCGCCT 851 TTTCCGCCAC GCTGGAAGAA ACCGCGCAAG
CCGATGTGCT GCTGCACGTC 901 GTCGATGCCG CCGCTCCGAA CAGCGGACAG
CAGATTGAAG ACGTGGAAAA 951 CGTACTGCAA GAAATCCATG CCGGCGATAT
TCCGTGCATC AAGGTGTACA 1001 ACAAAACCGA CCTGCTGCCG TCTGAAGAAC
AAAACACGGG CATATGGCGC 1051 GACGCTGCGG GAAAAATTGC CGCCGTCCGC
ATTTCCGTTG CTGAAAATAC 1101 CGGTATAGAC GCACTGCGCG AAGCCATTGC
CGAGTATTGT GCCGCCGCAC 1151 CAAACACAGA CGAAACCGAA ATGCCATGA
This corresponds to the amino acid sequence <SEQ ID 1560; ORF
538.a>:
TABLE-US-01900 a538.pep 1 MTGRTGRNGS TQAQPERVML VGVMLDKDGT
GSSATRLNGF QTALAEAVEL 51 VKAAGGDSVR VETAKRDRPH TALFVGTGKA
AELSEAVAAD GIDLVVFNHE 101 LTPTQERNLE KILQCRVLDR VGLILAIFAR
RARTQEGRLQ VELAQLSHLA 151 GRLIRGYGHL QSQRGGIGMK GPGETKLETD
RRLIAHRINA LKKQLANLKK 201 QRALRRKSRE SGTIKTFALV GYTNVGKSSL
FNRLTKSGIY AKDQLFATLD 251 TTARRLYISP ECSIILTDTV GFVSDLPHKL
ISAFSATLEE TAQADVLLHV 301 VDAAAPNSGQ QIEDVENVLQ EIHAGDIPCI
KVYNKTDLLP SEEQNTGIWR 351 DAAGKIAAVR ISVAENTGID ALREAIAEYC
AAAPNTDETE MP* m538/a538 94.6% identity in 392 aa overlap 10 20 30
40 50 60 m538.pep
MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTALAEAVELVKAAGGDSVR ||||||
|||||||||||||||||||||||||||:||||||||||||||||||||||||| a538
MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTALAEAVELVKAAGGDSVR 10 20
30 40 50 60 70 80 90 100 110 120 m538.pep
VETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELTPTQERNLEKELKCRVLDR
||||||||||||||||||||||||||||||||||||||||||||||||||| |:|||||| a538
VETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELTPTQERNLEKILQCRVLDR 70 80
90 100 110 120 130 140 150 160 170 180 m538.pep
VGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHLQSQRGGIGMKGPGETKLETD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a538
VGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHLQSQRGGIGMKGPGETKLETD 130
140 150 160 170 180 190 200 210 220 230 240 m538.pep
RRLIAHRINALIKQLANLKKQRALRRKSRESGTIKTFALVGYTNVGKSSLFNRLTKSGIY
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a538
RRLIAHRINALKKQLANLKKQRALRRKSRESGTIKTFALVGYTNVGKSSLFNRLTKSGIY 190
200 210 220 230 240 250 260 270 280 m538.pep
AKDKL-------------SPECSIILTDTVGFVSDLPHKLISAFSXTLEETAQADVLLHV |||:|
||||||||||||||||||||||||||| |||||||||||||| a538
AKDQLFATLDTTARRLYISPECSIILTDTVGFVSDLPHKLISAFSATLEETAQADVLLHV 250
260 270 280 290 300 290 300 310 320 330 340 m538.pep
VDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYNKTDLLPSEEQNTGIWRDAAGKIAAVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a538
VDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYNKTDLLPSEEQNTGIWRDAAGKIAAVR 310
320 330 340 350 360 350 360 370 380 m538.pep
ISVAENTGIDALREAIAESCAAAPNTDETEMPX |||||||||||||||||| ||||||||||||||
a538 ISVAENTGIDALREAIAEYCAAAPNTDETEMPX 370 380 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1561>:
TABLE-US-01901 g539.seq 1 atggaggatc tgcaggaaat cgggttcgat
gtcgccgccg taaaggtagg 51 tcggcagcgc gaacatcatc gtctgcatca
tacccagtcc ggcaacggca 101 aggcggacga tgtattgttt gcgttctttt
tggttggcgg cttcgatttt 151 ttgcgcgtca tagggtgcgg cggtgtagcc
tgtctgccgg attttcaaca 201 gaatgtcgga gaggcggatt ttgccgtcgt
cccagacgac gcggcagcgg 251 tgcgtgctgt aattgaggtc gatgcggacg
atgccgtctg tgcgcaaaag 301 ctgctgttcg atcagccaga cgcaggcggc
gcaggtaatg ccgctgagca 351 tcagcactgc ttcgtgcgtg ccattatggg
tttccacaaa gtcggattgg 401 acttcgggca ggtcgtacag gcggatttgg
tcgaggattt cttggggcgg 451 cagttcggtt tttttcgcgt cggcggtgcg
tcgtttgtaa taactgccca 501 agccggaatc gatgatgctt tgtgcgactg
cctgacagcc gacgcagcag 551 gtttcgcggt cttcgccttc gtagcggacg
gtcagatgca ggttttcggg 601 aacgtccagc ccgcagtgga aacaggtttt
tttcatggca tttcggtttc 651 gtctgtgttt ggtgcggcgg cacaatactc
ggcaatggct tcgcgcagtg 701 cgtctatacc ggtattttca gcaacggaaa
tgcggacggc ggcaattttt 751 cccgcagcgt cgcgccatat gcccgtgttt
tgttcttcag acggcagcag 801 gtcggttttg ttgtacacct tgatgcacgg
aatatcgtgg gcatggattt 851 cttgcagtac gttttccacg tcttcaatct
gctgcccgct gttccgggcg 901 gcagcatcga cgacgtgcag cagcacatcg
gcttgcacgg tttcttccaa 951 ggtggcggaa aaggcggaaa tcagtttgtg
cggcagatcg ctgacgaatc 1001 cgacggtatc ggtcaggata atgctgcatg
cgggactgat gtacagccgc 1051 cgcgccgtcg tgtcgagagt ggcgaaaagc
tggtctttcg catatatgcc 1101 cgacttggtc agccggttga acaggctgga
tttgccgaca ttggtatag
This corresponds to the amino acid sequence <SEQ ID 1562; ORF
539.ng>:
TABLE-US-01902 g539.pep 1 MEDLQEIGFD VAAVKVGRQR EHHRLHHTQS
GNGKADDVLF AFFLVGGFDF 51 LRVIGCGGVA CLPDFQQNVG EADFAVVPDD
AAAVRAVIEV DADDAVCAQK 101 LLFDQPDAGG AGNAAEHQHC FVRAIMGFHK
VGLDFGQVVQ ADLVEDFLGR 151 QFGFFRVGGA SFVITAQAGI DDALCDCLTA
DAAGFAVFAF VADGQMQVFG 201 NVQPAVETGF FHGISVSSVF GAAAQYSAMA
SRSASIPVFS ATEMRTAAIF 251 PAASRHMPVF CSSDGSRSVL LYTLMHGISW
AWISCSTFST SSICCPLFRA 301 AASTTCSSTS ACTVSSKVAE KAEISLCGRS
LTNPTVSVRI MLHAGLMYSR 351 RAVVSRVAKS WSFAYMPDLV SRLNRLDLPT LV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1563>:
TABLE-US-01903 m539.seq (partial) 1 ATGGAGGATT TGCAGGAAAT
CGGGTTCGAT GTCGCCGCCG TAAAGGTAGG 51 TCGGCAGCGC GAACATCATC
GTCTGCATCA TCCCCAGCCC GGCAACGGCG 101 AGGCGGACGA TGTATTGTTT
GCGTTCTTTT TGGTTGGCGG CTTCGATTTT 151 TTGCGCGTCA TAGGGTGCGG
CGGTGTAGCC TATCTGCCTG ATTTTCAACA 201 GAATGTCGGA AAGGCGGATT
TTGCCGTCGT CCCAGACGAc GCGGCaGCgG 251 TGCGTGCTGT AATTGAGGTC
GATGCGGACG ATGCCGTCTG TACGCAAAAG 301 CTGCTGTTCG ATCAGCCAGA
CGCAGGCGGC GCAGGTGATG CCGCCGAGCA 351 TTAAAACCGC CTCGCGCGTG
CCGCCGTGGG TTTCCACAAA GTCGGACTGG 401 ACTTCGGGCA GGTCGTACAG
GCGGATTTGG TCGAGGATTT CTTGGGGCGG 451 CAgCTCGGTT TTTTGCGCGT
CGGCGGTGCG TTGTTTGTAA TAACTGCCCA 501 AGCCCGCGTC AATAATGCTT
TGTGCGACCG CCTGACAGCC GGCGCaCAgG 551 GTTTCGCGGT CTTCGTTTTC
GTAACGGACA GTCAGGTGGA GGTGTTCGGG 601 AACATCCAGA CCGCAGTGGA
AACAGGTTTT TTTCATGGCA TTTCGGTTTC 651 GTCTGTGTTT GGTGCGGCGG
CACAAGACTC GGCAATgGCT TCGCGCAGTG 701 CGTCTATACC GGTATTTTCA
GCAACGGAAA TGCGGACGGC GGCAATTTTT 751 CCCGCAGCGT CGCGCCATAT
GTCTGTGTTT TGTTCTTCAG ACGGCAGCAG 801 GTCGGTTTTG TTGTACACCT
TgATGCACGG AATATCGCCG GCATGGATTT 851 CTTGCAGTAC GTTTTCCACG
TCTTCAATCT GCTGTCCGCT GTTCGGAGCG 901 GCGGCATCGA CGACGTGCAG
CAGCACATCG GCTTGCGCGG TTTCTTCCAG 951 CGTGGcG.AA AAGGCGGAAA
TCAGTTTgTG CGGCAGATCG CTnACGAATC 1001 CGACGGTATC GGTCAGGATA
ATGCTGCATT CGGGAC...
This corresponds to the amino acid sequence <SEQ ID 1564; ORF
539>:
TABLE-US-01904 m539.pep (partial) 1 MEDLQEIGFD VAAVKVGRQR
EHHRLHHPQP GNGEADDVLF AFFLVGGFDF 51 LRVIGCGGVA YLPDFQQNVG
KADFAVVPDD AAAVRAVIEV DADDAVCTQK 101 LLFDQPDAGG AGDAAEH*NR
LARAAVGFHK VGLDFGQVVQ ADLVEDFLGR 151 QLGFLRVGGA LFVITAQARV
NNALCDRLTA GAQGFAVFVF VTDSQVEVFG 201 NIQTAVETGF FHGISVSSVF
GAAAQDSAMA SRSASIPVFS ATEMRTAAIF 251 PAASRHMPVF CSSDGSRSVL
LYTLMHGISP AWISCSTFST SSICCPLFGA 301 AASTTCSSTS ACAVSSSVAX
KAEISLCGRS LTNPTVSVRI MLHSG....
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 539
shows 89% identity over a 345 aa overlap with a predicted ORF (ORF
539.ng) from N. gonorrhoeae:
TABLE-US-01905 m539/g539 10 20 30 40 50 60 m539.pep
MEDLQEIGFDVAAVKVGRQREHHRLHHPQPGNGEADDVLFAFFLVGGFDFLRVIGCGGVA
||||||||||||||||||||||||||| | |||:|||||||||||||||||||||||||| g539
MEDLQEIGFDVAAVKVGRQREHHRLHHTQSGNGKADDVLFAFFLVGGFDFLRVIGCGGVA 10 20
30 40 50 60 70 80 90 100 110 120 m539.pep
YLPDFQQNVGKADFAVVPDDAAAVRAVIEVDADDAVCTQKLLFDQPDAGGAGDAAEHXNR
|||||||||:||||||||||||||||||||||||||:||||||||||||||:|||| : g539
CLPDFQQNVGEADFAVVPDDAAAVRAVIEVDADDAVCAQKLLFDQPDAGGAGNAAEHQHC 70 80
90 100 110 120 130 140 150 160 170 180 m539.pep
LARAAVGFHKVGLDFGQVVQADLVEDFLGRQLGFLRVGGALFVITAQARVNNALCDRLTA ::||
:|||||||||||||||||||||||||:||:||||| ||||||| :::|||| ||| g539
FVRAIMGFHKVGLDFGQVVQADLVEDFLGRQFGFFRVGGASFVITAQAGIDDALCDCLTA 130
140 150 160 170 180 190 200 210 220 230 240 m539.pep
GAQGFAVFVFVTDSQVEVFGNIQTAVETGFFHGISVSSVFGAAAQDSAMASRSASIPVFS |
|||||:||:|:|::||||:| ||||||||||||||||||||| |||||||||||||| g539
DAAGFAVFAFVADGQMQVFGNVQPAVETGFFHGISVSSVFGAAAQYSAMASRSASIPVFS 190
200 210 220 230 240 250 260 270 280 290 300 m539.pep
ATEMRTAAIFPAASRHMPVFCSSDGSRSVLLYTLMHGISPAWISCSTFSTSSICCPLFGA
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | g539
ATEMRTAAIFPAASRHMPVFCSSDGSRSVLLYTLMHGISWAWISCSTFSTSSICCPLFRA 250
260 270 280 290 300 310 320 330 340 m539.pep
AASTTCSSTSACAVSSSVAXKAEISLCGRSLTNPTVSVRIMLHSG ||||||||||||:|||:||
|||||||||||||||||||||||:| g539
AASTTCSSTSACTVSSKVAEKAEISLCGRSLTNPTVSVRIMLHAGLMYSRRAVVSRVAKS 310
320 330 340 350 360 g539 WSFAYMPDLVSRLNRLDLPTLV 370 380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1565>:
TABLE-US-01906 a539.seq 1 ATGGAGGATT TGCAGGAAAT CGGGTTCGAT
GTCGCCGCCG TAAAGGTAGG 51 TCGGCAGCGC GAACATCATC GTCTGCATCA
TCCCCAGCCC GGCAACGGCG 101 AGGCGGACGA TGTATTGTTT GCGTTCTTTT
TGGTTGGCGG CTTCGATTTT 151 TTGCGCGTCA TAGGGTGCGG CGGTGTAGCC
TATCTGCCTG ATTTTCAACA 201 GAATGTCGGA AAGGCGGATT TTGCCGTCGT
CCCAGACGAC GCGGCAGCGG 251 TGCGTGCTGT AATTGAGGTC GATGCGGACG
ATGCCGTCTG TACGCAAAAG 301 CTGCTGTTCG ATCAGCCAGA CGCAGGCGGC
GCAGGTGATG CCGCCGAGCA 351 TTAAAACCGC CTCGCGCGTG CCGCCGTGGG
TTTCCACAAA GTCGGACTGG 401 ACTTCGGGCA GGTCGTACAG GCGGATTTGG
TCGAGGATTT CTTGGGGCGG 451 CAGCTCGGTT TTTTGCGCGT CGGCGGTGCG
TTGTTTGTAA TAACTGCCCA 501 AGCCCGCGTC AATAATGCTT TGTGCGACTG
CCTGACAACC GGCGCAGCAG 551 GTTTCGCGGT CTTCGTTTTC GTAACGGACG
GTCAGATGCA GGTTTTCGGG 601 AACGTCCAGC CCGCAGTGGA AACAGGTTTT
TTTCATGGCA TTTCGGTTTC 651 GTCTGTGTTT GGTGCGGCGG CACAATACTC
GGCAATGGCT TCGCGCAGTG 701 CGTCTATACC GGTATTTTCA GCAACGGAAA
TGCGGACGGC GGCAATTTTT 751 CCCGCAGCGT CGCGCCATAT GCCCGTGTTT
TGTTCTTCAG ACGGCAGCAG 801 GTCGGTTTTG TTGTACACCT TGATGCACGG
AATATCGCCG GCATGGATTT 851 CTTGCAGTAC GTTTTCCACG TCTTCAATCT
GCTGTCCGCT GTTCGGAGCG 901 GCGGCATCGA CGACGTGCAG CAGCACATCG
GCTTGCGCGG TTTCTTCCAG 951 CGTGGCGGAA AAGGCGGAAA TCAGTTTGTG
CGGCAGATCG CTGACGAATC 1001 CGACGGTATC GGTCAGGATA ATGCTGCATT
CGGGACTGAT GTACAGCCGC 1051 CGCGCCGTCG TGTCGAGTGT GGCGAAAAGC
TGGTCTTTCG CATATATGCC 1101 CGACTTGGTC AGCCGGTTGA ACAGACTGGA
TTTGCCGACA TTGGTATAG
This corresponds to the amino acid sequence <SEQ ID 1566; ORF
539.a>:
TABLE-US-01907 a539.pep 1 MEDLQEIGFD VAAVKVGRQR EHHRLHHPQP
GNGEADDVLF AFFLVGGFDF 51 LRVIGCGGVA YLPDFQQNVG KADFAVVPDD
AAAVRAVIEV DADDAVCTQK 101 LLFDQPDAGG AGDAAEH*NR LARAAVGFHK
VGLDFGQVVQ ADLVEDFLGR 151 QLGFLRVGGA LFVITAQARV NNALCDCLTT
GAAGFAVFVF VTDGQMQVFG 201 NVQPAVETGF FHGISVSSVF GAAAQYSAMA
SRSASIPVFS ATEMRTAAIF 251 PAASRHMPVF CSSDGSRSVL LYTLMHGISP
AWISCSTFST SSICCPLFGA 301 AASTTCSSTS ACAVSSSVAE KAEISLCGRS
LTNPTVSVRI MLHSGLMYSR 351 RAVVSSVAKS WSFAYMPDLV SRLNRLDLPT LV*
m539/a539 97.1% identity in 345 aa overlap 10 20 30 40 50 60
m539.pep
MEDLQEIGFDVAAVKVGRQREHHRLHHPQPGNGEADDVLFAFFLVGGFDFLRVIGCGGVA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a539
MEDLQEIGFDVAAVKVGRQREHHRLHHPQPGNGEADDVLFAFFLVGGFDFLRVIGCGGVA 10 20
30 40 50 60 70 80 90 100 110 120 m539.pep
YLPDFQQNVGKADFAVVPDDAAAVRAVIEVDADDAVCTQKLLFDQPDAGGAGDAAEHXNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a539
YLPDFQQNVGKADFAVVPDDAAAVRAVIEVDADDAVCTQKLLFDQPDAGGAGDAAEHXNR 70 80
90 100 110 120 130 140 150 160 170 180 m539.pep
LARAAVGFHKVGLDFGQVVQADLVEDFLGRQLGFLRVGGALFVITAQARVNNALCDRLTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||: a539
LARAAVGFHKVGLDFGQVVQADLVEDFLGRQLGFLRVGGALFVITAQARVNNALCDCLTT 130
140 150 160 170 180 190 200 210 220 230 240 m539.pep
GAQGFAVFVFVTDSQVEVFGNIQTAVETGFFHGISVSSVFGAAAQDSAMASRSASIPVFS ||
||||||||||:|::||||:| ||||||||||||||||||||| |||||||||||||| a539
GAAGFAVFVFVTDGQMQVFGNVQPAVETGFFHGISVSSVFGAAAQYSAMASRSASIPVFS 190
200 210 220 230 240 250 260 270 280 290 300 m539.pep
ATEMRTAAIFPAASRHMPVFCSSDGSRSVLLYTLMHGISPAWISCSTFSTSSICCPLFGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a539
ATEMRTAAIFPAASRHMPVFCSSDGSRSVLLYTLMHGISPAWISCSTFSTSSICCPLFGA 250
260 270 280 290 300 310 320 330 340 m539.pep
AASTTCSSTSACAVSSSVAXKAEISLCGRSLTNPTVSVRIMLHSG |||||||||||||||||||
||||||||||||||||||||||||| a539
AASTTCSSTSACAVSSSVAEKAEISLCGRSLTNPTVSVRIMLHSGLMYSRRAVVSSVAKS 310
320 330 340 350 360 a539 WSFAYMPDLVSRLNRLDLPTLVX 370 380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1567>:
TABLE-US-01908 g540.seq 1 atgccgccct cccgacgcgg caacggggtg
ttttatcaaa acggcaaact 51 tgccaatgcg gtttccgctt gccgattgcc
aaaccggcaa acctttcccg 101 tgccggtgcc gaacccgatg ccgtctgaac
cttcagacgg catcgggtgt 151 ttatttgtcc actcggacgg gtgcaggttc
gtattgtgtc gattcgtcgc 201 cgtaatacag cacgccgagt ttgacgggga
tgcgtccctg cgatttgcgg 251 tgggcgttgg aatcgcgcaa ggaatacgcg
cagccgcagt attcctgctg 301 gtagaagttt tcgcgtttgc tgatttcaat
catacgcgcg ccgccgccgc 351 ctttgcgcca gttgaagtcc caataggcca
catcatcgta aggcgcggcg 401 gcacggtgtc cgcagtcgtt gatttgcgcc
atatttttcc agcgtga
This corresponds to the amino acid sequence <SEQ ID 1568; ORF
540.ng>:
TABLE-US-01909 g540.pep 1 MPPSRRGNGV FYQNGKLANA VSACRLPNRQ
TFPVPVPNPM PSEPSDGIGC 51 LFVHSDGCRF VLCRFVAVIQ HAEFDGDASL
RFAVGVGIAQ GIRAAAVFLL 101 VEVFAFADFN HTRAAAAFAP VEVPIGHIIV
RRGGTVSAVV DLRHIFPA *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1569>:
TABLE-US-01910 m540.seq (partial) 1 ..CCGAACCCGA TGCCGTCTGA
ACCTTCAGAC GGCATCGGGT GTTTATTTGT 51 CCACCCGGAT GGGGGCAGGT
TCGTATTGTG TCGATTCGTC GCCGTAATAC 101 AGCACGCCGA GTTTGATGGG
GATTCTGCCC TGTGATTTGC GGTGGGCATT 151 GGAATCCCTC AGGGAATAGG
CACAACCGCA ATATTCCTGC TGGTAGAAGT 201 TTTCACGTTT GCTGATTTCA
ATCATGCGCG CGCTGCCGCC GCCTTTGCGC 251 CAGTTGAAAT CCCAATACAC
CACATCATCG TAAGGCGCGG CGGCGCGGTG 301 TCCGCAGTCG TTGATTTGCG
CCATATTTTT CCAGCGTGA
This corresponds to the amino acid sequence <SEQ ID 1570; ORF
540>:
TABLE-US-01911 m540.pep (partial) 1 ..PNPMPSEPSD GIGCLFVHPD
GGRFVLCRFV AVIQHAEFDG DSAL*FAVGI 51 GIPQGIGTTA IFLLVEVFTF
ADFNHARAAA AFAPVEIPIH HIIVRRGGAV 101 SAVVDLRHIF PA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 540
shows 85.7% identity over a 112 aa overlap with a predicted ORF
(ORF 540.ng) from N. gonorrhoeae:
TABLE-US-01912 m540/g540 10 20 30 m540.pep
PNPMPSEPSDGIGCLFVHPDGGRFVLCRFV |||||||||||||||||| || |||||||| g540
GNGVFYQNGKLANAVSACRLPNRQTFPVPVPNPMPSEPSDGIGCLFVHSDGCRFVLCRFV 10 20
30 40 50 60 40 50 60 70 80 90 m540.pep
AVIQHAEFDGDSALXFAVGIGIPQGIGTTAIFLLVEVFTFADFNHARAAAAFAPVEIPIH
|||||||||||::| ||||:|| ||| ::|:|||||||:||||||:||||||||||:|| g540
AVIQHAEFDGDASLRFAVGVGIAQGIRAAAVFLLVEVFAFADFNHTRAAAAFAPVEVPIG 70 80
90 100 110 120 100 110 m540.pep HIIVRRGGAVSAVVDLRHIFPAX
||||||||:|||||||||||||| g540 HIIVRRGGTVSAVVDLRHIFPAX 130 140 L'
estremita' N-terminale di meningococ co e' assente perche'
interviene la fine del contig
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1571>:
TABLE-US-01913 a540.seq 1 ATGCCGTCCT CCCGACGCGG CAACGGGGTG
TTTTATCAAA ACGGCAAACT 51 TGCCAATGCG GTTTCCGATT GCAGATTGCC
AAACCGGCAA ACCTTTCCCG 101 TGCCGATGCC GAACCCGATG CCGTCTGAAC
CTTCAGACGG CATCGGGTGT 151 TTATTTGTCC ACCCGGATGG GTGCAGGTTC
GTATTGTGTC GATTCGTCGC 201 CGTAATACAG CACGCCGAGT TTGATGGGGA
TTCTGCCCTG TGATTTGCGG 251 TGGGCGTTGG AATCCCTCAG GGAATAGGCA
CAACCGCAAT ATTCCTGCTG 301 GTAGAAGTTT TCACGTTTGC TGATTTCAAT
CATACGCGCG CTGCCGCCGC 351 CTTTGCGCCA GTTGAAATCC CAATACACCA
CATCATCGTA AGGCGCGGCG 401 GCGCGGCGGC CGCAGTCGTT AATCTGGTTC
ATGTTTTTCC A
This corresponds to the amino acid sequence <SEQ ID 1572; ORF
540.a>:
TABLE-US-01914 a540.pep (partial) 1 MPSSRRGNGV FYQNGKLANA
VSDCRLPNRQ TFPVPMPNPM PSEPSDGIGC 51 LFVHPDGCRF VLCRFVAVIQ
HAEFDGDSAL *FAVGVGIPQ GIGTTAIFLL 101 VEFTFADFN HTRAAAAFAP
VEIPIHHIIV RRGGAAAAVV NLVHVFP m540/a540 92.8% identity in 111 aa
overlap 10 20 30 m540.pep PNPMPSEPSDGIGCLFVHPDGGRFVLCRFV
||||||||||||||||||||| |||||||| a540
GNGVFYQNGKLANAVSDCRLPNRQTFPVPMPNPMPSEPSDGIGCLFVHPDGCRFVLCRFV 10 20
30 40 50 60 40 50 60 70 80 90 m540.pep
AVIQHAEFDGDSALXFAVGIGIPQGIGTTAIFLLVEVFTFADFNHARAAAAFAPVEIPIH
|||||||||||||||||||:|||||||||||||||||||||||||:|||||||||||||| a540
AVIQHAEFDGDSALXFAVGVGIPQGIGTTAIFLLVEVFTFADFNHTRAAAAFAPVEIPIH 70 80
90 100 110 120 100 110 m540.pep HIIVRRGGAVSAVVDLRHIFPAX
|||||||||::|||:| |:|| a540 HIIVRRGGAAAAVVNLVHVFP 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1573>:
TABLE-US-01915 g542.seq 1 atgccgaaat ggtcgcgcat acggcgttgc
agcgtccttt cgctgatgtt 51 cagcgcggct gtcagccggt tgacttggtg
tgcgccgccg tcgaacgcgg 101 cattcagggt gcggctgaag tcttcagacg
gcatagcgtc tgcttccgcc 151 gtttgccccg ccgccggctc gatgccgtct
gaaaccgtgt cccacaaatc 201 cgacagcagc cgcaacacgt ccgcctcgcg
gcgcaatgtt tcgcccaaat 251 gcccctttgg gacggtttgc aggcaggatg
ccgccaagcc gcgcaggttt 301 gggggcaaat cccatatcct gaccggttcg
cggtaa
This corresponds to the amino acid sequence <SEQ ID 1574; ORF
542.ng>:
TABLE-US-01916 g542.pep 1 MPKWSRIRRC SVLSLMFSAA VSRLTWCAPP
SNAAFRVRLK SSDGIASASA 51 VCPAAGSMPS ETVSHKSDSS RNTSASRRNV
SPKCPFGTVC RQDAAKPRRF 101 GGKSHILTGS R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1575>:
TABLE-US-01917 m542.seq 1 ATGCCGAAAT GGTCGCGCAT ACGGCGTTGC
AGCGTCCTTT CACTGATGTT 51 CAGCGCGTCT GTCAGCCGGT TGACTTGGTG
TGCGCCGTCG GCAAACGCGG 101 CATTTAGGGT GCGGCTGAAG TCTTCAGACG
GCATAGCGTC TGCTTCCGCC 151 GTTTGCCCCG CCGCCGGCCC GATGCCGTCT
GAAACCGTGT CCCACAAGTC 201 CGACAGCAGC CGCAACACGT CCGCCTCGCG
.CGCAATGTT TCGCCCAAAT 251 GCCCCTTTGG GACGGCTTTC AGGCAGGATG
CCGCCAAGCC GCGCAGGTTC 301 GGGGGCAAAT CCCATATCCT GACCGGTTCG
CGGTAA
This corresponds to the amino acid sequence <SEQ ID 1576; ORF
542>:
TABLE-US-01918 m542.pep 1 MPKWSRIRRC SVLSLMFSAS VSRLTWCAPS
ANAAFRVRLK SSDGIASASA 51 VCPAAGPMPS ETVSHKSDSS RNTSASRAMF
RPNAPLGRNV SPKCPFGTAF 101 RQDAAKPRRF GGKSHILTGS R*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 542
shows 93.7% identity over a 111 aa overlap with a predicted ORF
(ORF 542.ng) from N. gonorrhoeae:
TABLE-US-01919 m542/g542 10 20 30 40 50 60 m542.pep
MPKWSRIRRCSVLSLMFSASVSRLTWCAPSANAAFRVRLKSSDGIASASAVCPAAGPMPS
|||||||||||||||||||:||||||||| :||||||||||||||||||||||||| ||| g542
MPKWSRIRRCSVLSLMFSAAVSRLTWCAPPSNAAFRVRLKSSDGIASASAVCPAAGSMPS 10 20
30 40 50 60 70 80 90 100 110 m542.pep
ETVSHKSDSSRNTSASXRNVSPKCPFGTAFRQDAAKPRRFGGKSHILTGSRX
|||||||||||||||| |||||||||||: |||||||||||||||||||||| g542
ETVSHKSDSSRNTSASRRNVSPKCPFGTVCRQDAAKPRRFGGKSHILTGSRX 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1577>:
TABLE-US-01920 a542.seq 1 ATGCCGAAAT GGTCGCGCAT ACGGCGTTGC
AGCGTCCTTT CGCTGATGTT 51 CAGCGTGTCT GCCAGCCGGT TGACTTGATG
TGCGCCGCCG GCAAACGCGG 101 CATTCAGGAT GCGGCTGAAG TCTTCAGACG
GCATAGCGTC TGCTTCCGCC 151 GTTTGCCCCG CCGCCGGCCC GATGCCGTCT
GAAACCGTGT CCCACAAGTC 201 CGACAGCAGC CGCAACACGT CCGCCTCGCG
GCGCAATGTT TCGCCCAAAT 251 GCCCCTTTGG GACGGCTTTC AGGCAGGATG
CCGCCAAGCC GCGCAGGTTC 301 GGGGGCAAAT CCCATATCCT GACCGGTTCG
CGGTAA
This corresponds to the amino acid sequence <SEQ ID 1578; ORF
542.a>:
TABLE-US-01921 a542.pep 1 MPKWSRIRRC SVLSLMFSVS ASRLT*CAPP
ANAAFRMRLK SSDGIASASA 51 VCPAAGPMPS ETVSHKSDSS RNTSASRRNV
SPKCPFGTAF RQDAAKPRRF 101 GGKSHILTGS R* m542/a542 94.6% identity in
111 aa overlap 10 20 30 40 50 60 m542.pep
MPKWSRIRRCSVLSLMFSASVSRLTWCAPSANAAFRVRLKSSDGIASASAVCPAAGPMPS
||||||||||||||||||:|:|||| ||| ||||||:||||||||||||||||||||||| a542
MPKWSRIRRCSVLSLMFSVSASRLTXCAPPANAAFRMRLKSSDGIASASAVCPAAGPMPS 10 20
30 40 50 60 70 80 90 100 110 m542.pep
ETVSHKSDSSRNTSASXRNVSPKCPFGTAFRQDAAKPRRFGGKSHILTGSRX
|||||||||||||||| ||||||||||||||||||||||||||||||||||| a542
ETVSHKSDSSRNTSASRRNVSPKCPFGTAFRQDAAKPRRFGGKSHILTGSRX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1579>:
TABLE-US-01922 g543.seq 1 atggtttgtc ggttatttgc cgccgttttt
ggctttcaac tcggcaatca 51 gcccgtcgat gcctttggct ttgatgattt
cgccgaattg gttgcggtac 101 acggtaacca ggctcgtgcc ttcgatggcg
acgttgtagg tacggtattt 151 gccgccgctt tggtaggtgg taaagtccat
attgacgggc ttctgaccgg 201 ggatgccgac ttcggcacgg acgacgattt
ccttgccgcc cttattgacg 251 atgggattgt ctttgacgtt gacggtcgcg
tttttgaatt tcagcatcgt 301 gccggaatag gtgcggatca gcagggtttg
aaattctttg gccaacgctt 351 gtttttgcgc gtcggacgcg gtacgccaag
ggttgccgac cgccaatgcg 401 gtcatacgtt ggaaatcgaa atagggaacc
gcataggctt cggcttttgg 451 gcgtgcagaa gccgcgtcgc cgcttttgag
gatggtcaaa acctgtgtgg 501 cgttttggcg gatttgtccc actgcgtcgg
ccggggaggc aaatgccatg 551 ccgatgctca aaataccgat gcccaatgcg
ctgatgaagg aggatttttt 601 cacgatgtct ttcctgaaaa tggatgtgta
tgtttattct gcggcttttt 651 ccgcattgcc gccctcagcg tttttctcgg
cgaagctggt catgaattta 701 ccgatcaggt tttccagaac cattgcagaa
ctggttacgg agatggtgtc 751 gccggcagca aggttttccg tatcgccgcc
ctgctgcagc ccgatgtact 801 gttcgcccaa aagtcccgaa gtcaggattt
gcgcggaaac gtcactgctg 851 aactgatact tgccgtccaa atcaaggcgc
accctcgcct gataggattt 901 cgggtcaagc ccgatagcgc cgacgcgccc
gaccaatacg cctgcggatt 951 tgacgggggc attgaccttc aaaccgccga
tgtcgccgaa atcggcataa 1001 acggcgtaag ttttgtccga accgccgaac
gccgcgccgc ccgccacgcg 1051 gaaagcgaga aaggcaaccg ccgccgcgcc
gatcaagacg aacagtccga 1101 cccaaaattc caatatgttc tttttcatta a
This corresponds to the amino acid sequence <SEQ ID 1580; ORF
543.ng>:
TABLE-US-01923 g543.pep 1 MVCRLFAAVF GFQLGNQPVD AFGFDDFAEL
VAVHGNQARA FDGDVVGTVF 51 AAALVGGKVH IDGLLTGDAD FGTDDDFLAA
LIDDGIVFDV DGRVFEFQHR 101 AGIGADQQGL KFFGQRLFLR VGRGTPRVAD
RQCGHTLEIE IGNRIGFGFW 151 ACRSRVAAFE DGQNLCGVLA DLSHCVGRGG
KCHADAQNTD AQCADEGGFF 201 HDVFPENGCV CLFCGFFRIA ALSVFLGEAG
HEFTDQVFQN HCRTGYGDGV 251 AGSKVFRIAA LLQPDVLFAQ KSRSQDLRGN
VTAELILAVQ IKAHPRLIGF 301 RVKPDSADAP DQYACGFDGG IDLQTADVAE
IGINGVSFVR TAERRAARHA 351 ESEKGNRRRA DQDEQSDPKF QYVLFH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1581>:
TABLE-US-01924 m543.seq 1 ATGGTTTGTC GGTTATTTGC CGCCGTTTTT
GGCTTTCAAC TCGGCAATCA 51 GTCCGTCCAC GCCTTTCGCT TTGATAATTT
CGCCGAATTG GTTGCGGTAC 101 ACGGTAACCA GGCTCGCGCC TTCGATGGCG
ACGTTGTAGG TACGGTATTT 151 ACCGCCGCTT TGGTAGGTGG TGAAGTCCAT
GTTGACGGGT TTTTGCCCGG 201 GTACGCCGAC TTCGGCGCGG ACGATGATTT
CTTTGCCGCC TTTATTGACG 251 ATGGGATTGT CTTTGACGTT GACGTTGGCG
TTTTTTAATT TCAGCATCGT 301 GCCGGAATAG GTGCGGATCA GCAGGGTTTG
AAATTCTTTG GCCAACGCTT 351 GTTTTTGCGC GTCGGACGCG GTGCGCCAAG
GGTTGCCGAC CGCCAATGCG 401 GTCATACGTT GGAAATCGAA ATAGGGAATC
GCATAGGCTT CGGCTTTTTG 451 GCGAGCGGTG TTGGCATCGC CGTTTTTTAA
GATGCTCAAT ACTTGAGTGG 501 CGTTTTGACG GATTTGGCTT ACCGCGTCGG
CAGGGGCGGC AAATGCCATG 551 CCGATGCTCA AAATACCGAT GCCCAATGCG
CTGATGAGGG AGGATTTTTT 601 CATGATTAAG TGTCCTAGTT TGAATATGAT
GGCATACGTT TATTCGGCGG 651 CTTTTTCCGC ATTGCCGCCG TCGGCATTTT
TCTCGGCAAA ACTCGTCATG 701 AATTTGCCGA TAAGGTTTTC CAGAACCATT
GCAGAACTGG TTACGGAGAT 751 GGTGTCGCCG GCAGCAAGGT TTTCCGTGTC
GCCGCCCTGC TGCAGCCCGA 801 TGTACTGCTC GCCCAAAAGT CCCGAAGTCA
GGATTTGCGC GGAAACGTCG 851 CTGCTGAACT GATACTTGCC GTCCAAATCG
AGGCGCACCC TCGCCTGATA 901 GGATTTCGGG TCAAGTCCGA TAGCGCCGAC
GCGCCCGACC AATACGCCTG 951 CGGATTTGAC GGGGGCATTG ACCTTCAAAC
CGCCGATGTC GCCGAAATCG 1001 GCATAAACGG CGTAAGTTTT GTCCGAACCG
CCGAACGCCG CACCGCCGGC 1051 CACGCGGAAA GCGAGAAAGG CAACCGCCGC
CGCGCCAATC AGGACGAACA 1101 GTCCGACCCA AAATTCCAAT ATGTTCTTCT
TCATTAA
This corresponds to the amino acid sequence <SEQ ID 1582; ORF
543>:
TABLE-US-01925 m543.pep 1 MVCRLFAAVF GFQLGNQSVH AFRFDNFAEL
VAVHGNQARA FDGDVVGTVF 51 TAALVGGEVH VDGFLPGYAD FGADDDFFAA
FIDDGIVFDV DVGVFXFQHR 101 AGIGADQQGL KFFGQRLFLR VGRGAPRVAD
RQCGHTLEIE IGNRIGFGFL 151 ASGVGIAVFX DAQYLSGVLT DLAYRVGRGG
KCHADAQNTD AQCADEGGFF 201 HDXVSXFEYD GIRLFGGFFR IAAVGIFLGK
TRHEFADKVF QNHCRTGYGD 251 GVAGSKVFRV AALLQPDVLL AQKSRSQDLR
GNVAAELILA VQIEAHPRLI 301 GFRVKSDSAD APDQYACGFD GGIDLQTADV
AEIGINGVSF VRTAERRTAG 351 HAESEKGNRR RANQDEQSDP KFQYVLLH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 543
shows 84.2% identity over a 379 aa overlap with a predicted ORF
(ORF 543.ng) from N. gonorrhoeae:
TABLE-US-01926 m543/g543 10 20 30 40 50 60 m543.pep
MVCRLFAAVFGFQLGNQSVHAFRFDNFAELVAVHGNQARAFDGDVVGTVFTAALVGGEVH
||||||||||||||||| | || ||:||||||||||||||||||||||||:||||||:|| g543
MVCRLFAAVFGFQLGNQPVDAFGFDDFAELVAVHGNQARAFDGDVVGTVFAAALVGGKVH 10 20
30 40 50 60 70 80 90 100 110 120 m543.pep
VDGFLPGYADFGADDDFFAAFIDDGIVFDVDVGVFXFQHRAGIGADQQGLKFFGQRLFLR :||:|
| ||||:||||:||:|||||||||| || |||||||||||||||||||||||| g543
IDGLLTGDADFGTDDDFLAALIDDGIVFDVDGRVFEFQHRAGIGADQQGLKFFGQRLFLR 70 80
90 100 110 120 130 140 150 160 170 180 m543.pep
VGRGAPRVADRQCGHTLEIEIGNRIGFGFLASGVGIAVFXDAQYLSGVLTDLAYRVGRGG
||||:|||||||||||||||||||||||| | :|:| |:| | |||:||:: ||||| g543
VGRGTPRVADRQCGHTLEIEIGNRIGFGFWACRSRVAAFEDGQNLCGVLADLSHCVGRGG 130
140 150 160 170 180 190 200 210 220 230 239 m543.pep
KCHADAQNTDAQCADEGGFFHDXVSXFEYDG-IRLFGGFFRIAAVGIFLGKTRHEFADKV
|||||||||||||||||||||| | :| : || |||||||:::|||:: |||:|:| g543
KCHADAQNTDAQCADEGGFFHDV---FPENGCVCLFCGFFRIAALSVFLGEAGHEFTDQV 190
200 210 220 230 240 250 260 270 280 290 299 m543.pep
FQNHCRTGYGDGVAGSKVFRVAALLQPDVLLAQKSRSQDLRGNVAAELILAVQIEAHPRL
||||||||||||||||||||:|||||||||:|||||||||||||:|||||||||:||||| g543
FQNHCRTGYGDGVAGSKVFRIAALLQPDVLFAQKSRSQDLRGNVTAELILAVQIKAHPRL 240
250 260 270 280 290 300 310 320 330 340 350 359 m543.pep
IGFRVKSDSADAPDQYACGFDGGIDLQTADVAEIGINGVSFVRTAERRTAGHAESEKGNR ||||||
|||||||||||||||||||||||||||||||||||||||||:| ||||||||| g543
IGFRVKPDSADAPDQYACGFDGGIDLQTADVAEIGINGVSFVRTAERRAARHAESEKGNR 300
310 320 330 340 350 360 370 379 m543.pep RRANQDEQSDPKFQYVLLHX
|||:|||||||||||||:|| g543 RRADQDEQSDPKFQYVLFHX 360 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1583>:
TABLE-US-01927 a543.seq 1 ATGGCTTATG GATTACTTGC TGCCGTTTNT
AGCCTTCAAC TCGNCAATCA 51 GTCCGTCCAC GCCTTTCGCT TTGATAATTT
CGCCGAATTG GTTGCGGTAC 101 ACGGTAACCA GGCTCGCGCC TTCGATGGCG
ACGTTGTAGG TACGGTATTT 151 ACCGCCGCTT TGGTAGGTGG TGAAGTCCAT
GTTGACGGGT TTTTGCCCGG 201 NNACGCCGAC TTCGGCGCGG ACGATGATTT
CTTTGCCGCC TTTATTGACG 251 ATNGGATTGT CTTTGACGTT GACGTTGGCG
TTTTTTAATT TCAGCATCGT 301 GCCGGAATAG GTGCGGATCA GCAGGGTTTG
AAATTCTTTG GCCAACGCTT 351 GTTTTTGCGC GTCGGACGCG GTGCGCCAAG
GGTTGCCGAC CGCCAATGCG 401 GTCATACGTT GGAAATCGAA ATAGGGAATC
GCATAGGCTT CGGCTTTTTG 451 GCGGGCGGTG TTGGCATCAC CGCTTTTTAA
GATGCTCAAT ACTTGAGTGG 501 CGTTTTGACG GATTTGGTTT ACCGCGTCGG
CAGGGGCGGC AAATGCCATG 551 CCGATGCTCA AAATACCGAT GCCCAATGCG
CTGATGAAGG AGGATTTTTT 601 CATGATTAAG TGTCCTAGTT TGAATATGAT
GGCATACGTT TATTCGGCGG 651 CTTTTTCCGC ATTGCCGCCG TCGGCATTTT
TCTCGGCAAA ACTCGTCATG 701 AATTTGCCGA TAAGGTTTTC CAGAACCATT
GCAGAACTGG TTACGGAGAT 751 GGTGTCGCCG GCAGCAAGGT TTTCCGTGTC
GCCGCCCTGC TGCAGCCCGA 801 TGTACTGCTC GCCCAAAAGT CCCGAAGTCA
GGATTTGCGC GGAAACGTCG 851 CTGCTGAACT GATACTTGCC GTCCAAATCG
AGGCGCACCC TCGCCTGATA 901 GGATTTCGGG TCAAGTCCGA TAGCGCCGAC
GCGCCCGACC AATACGCCTG 951 CGGATTTGAC GGGGGCATTG ACCTTCAAAC
CGCCGATGTC GCCGAAATCG 1001 GCATAAACGG CGTAAGTTTT GTCCGAACCG
CCGAACGCCG CACCGCCGGC 1051 CACGCGGAAA GCGAGAAAGG CAACCGCCGC
CGCGCCAATC AGGACGAACA 1101 GTCCGACCCA AAATTCCAAT ATGTTCTTTT
TCATTAA
This corresponds to the amino acid sequence <SEQ ID 1584; ORF
543.a>:
TABLE-US-01928 a543.pep 1 MAYGLLAAVX SLQLXNQSVH AFRFDNFAEL
VAVHGNQARA FDGDVVGTVF 51 TAALVGGEVH VDGFLPGXAD FGADDDFFAA
FIDDXIVFDV DVGVF*FQHR 101 AGIGADQQGL KFFGQRLFLR VGRGAPRVAD
RQCGHTLEIE IGNRIGFGFL 151 AGGVGITAF* DAQYLSGVLT DLVYRVGRGG
KCHADAQNTD AQCADEGGFF 201 HD*VS*FEYD GIRLFGGFFR IAAVGIFLGK
TRHEFADKVF QNHCRTGYGD 251 GVAGSKVFRV AALLQPDVLL AQKSRSQDLR
GNVAAELILA VQIEAHPRLI 301 GFRVKSDSAD APDQYACGFD GGIDLQTADV
AEIGINGVSF VRTAERRTAG 351 HAESEKGNRR RANQDEQSDP KFQYVLFH* m543/a543
96.0% identity in 378 aa overlap 10 20 30 40 50 60 m543.pep
MVCRLFAAVFGFQLGNQSVHAFRFDNFAELVAVHGNQARAFDGDVVGTVFTAALVGGEVH |:
|:||| ::|| ||||||||||||||||||||||||||||||||||||||||||||| a543
MAYGLLAAVXSLQLXNQSVHAFRFDNFAELVAVHGNQARAFDGDVVGTVFTAALVGGEVH 10 20
30 40 50 60 70 80 90 100 110 120 m543.pep
VDGFLPGYADFGADDDFFAAFIDDGIVFDVDVGVFXFQHRAGIGADQQGLKFFGQRLFLR
||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| a543
VDGFLPGXADFGADDDFFAAFIDDXIVFDVDVGVFXFQHRAGIGADQQGLKFFGQRLFLR 70 80
90 100 110 120 130 140 150 160 170 180 m543.pep
VGRGAPRVADRQCGHTLEIEIGNRIGFGFLASGVGIAVFXDAQYLSGVLTDLAYRVGRGG
|||||||||||||||||||||||||||||||:||||::||||||||||||||:||||||| a543
VGRGAPRVADRQCGHTLEIEIGNRIGFGFLAGGVGITAFXDAQYLSGVLTDLVYRVGRGG 130
140 150 160 170 180 190 200 210 220 230 240 m543.pep
KCHADAQNTDAQCADEGGFFHDXVSXFEYDGIRLFGGFFRIAAVGIFLGKTRHEFADKVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a543
KCHADAQNTDAQCADEGGFFHDXVSXFEYDGIRLFGGFFRIAAVGIFLGKTRHEFADKVF 190
200 210 220 230 240 250 260 270 280 290 300 m543.pep
QNHCRTGYGDGVAGSKVFRVAALLQPDVLLAQKSRSQDLRGNVAAELILAVQIEAHPRLI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a543
QNHCRTGYGDGVAGSKVFRVAALLQPDVLLAQKSRSQDLRGNVAAELILAVQIEAHPRLI 250
260 270 280 290 300 310 320 330 340 350 360 m543.pep
GFRVKSDSADAPDQYACGFDGGIDLQTADVAEIGINGVSFVRTAERRTAGHAESEKGNRR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a543
GFRVKSDSADAPDQYACGFDGGIDLQTADVAEIGINGVSFVRTAERRTAGHAESEKGNRR 310
320 330 340 350 360 370 379 m543.pep RANQDEQSDPKFQYVLLHX
||||||||||||||||:|| a543 RANQDEQSDPKFQYVLFHX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1585>:
TABLE-US-01929 g544.seq 1 atgaaaaaaa tactcaccgc cgccgccgtc
gcactgatcg gcatcctcct 51 cgccaccgtc ctcatccccg acagtaaaac
cgcgcccgcc ttctccctgc 101 ccgacctgca cggaaaaacc gtttccaacg
ccgacctgca aggcaaagtc 151 accctgatta atttttggtt tccctcctgt
ccgggttgtg tgagcgaaat 201 gcccaaagtc accaaaacgg caaacgacta
caaaaataaa gatttccaag 251 tcctcgccgt tgcccagccc atcgatccga
tagaaagcgt ccgccaatac 301 gtcaaagact acggactgcc gtttaccgtc
atttatgatg cggacaaagc 351 cgtcggacag gcattcggca cacaggttta
tccgacttcc gtccttatcg 401 gcaaaaaagg cgaaatcctc aaaacttatg
tcggcgaacc cgatttcggc 451 aaactctacc aagaaatcga taccgcgctg
gcgcaatag
This corresponds to the amino acid sequence <SEQ ID 1586; ORF
544.ng>:
TABLE-US-01930 g544.pep 1 MKKILTAAAV ALIGILLATV LIPDSKTAPA
FSLPDLHGKT VSNADLQGKV 51 TLINFWFPSC PGCVSEMPKV TKTANDYKNK
DFQVLAVAQP IDPIESVRQY 101 VKDYGLPFTV IYDADKAVGQ AFGTQVYPTS
VLIGKKGEIL KTYVGEPDFG 151 KLYQEIDTAL AQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1587>:
TABLE-US-01931 m544.seq 1 ATGAwAAAAA TACTCACCGC CGCCGTCGTC
GCACTGATCG GCATCCTCCT 51 TGCCATCGTC CTCmTCCCCG ACAGCAAAAC
CGCGCCCGCC TTCTCCmTGC 101 CCGACCTGCA CGGAAAAACC GTTTCCAACG
CCGACCTGCA AGGCAAAGTA 151 ACCCTGATTA ATTTTTGGTT TCCCTCCTGT
CCGGGTTGTG TGAGCGAwAT 201 GCCCAAAATC ATTAAAACGG CAAATGACTA
TAAAAwCAAA AACTTCCAAG 251 TACTTGCCGT CGCCCAGCCC ATCGATCCGA
TAGAAAGCGT CCGCCAATAT 301 GTCAAAGACT ACGGTTTGCC GTTTACCGTC
ATGTATGATG CGGACAAAGC 351 TGTCGGACAG GCGTTCGGCA CACAGGTTTA
TCCGACTTCC GTCCTTATCG 401 GCAAATAAGG CGAAATCTTC AAAACCTACG
TCGGCGAACC CGATTTCGGC 451 AAACTCTACC AAGAAATCGA TACGCGCGTG
GCGCAATAG
This corresponds to the amino acid sequence <SEQ ID 1588; ORF
544>:
TABLE-US-01932 m544.pep 1 MXKILTAAVV ALIGILLAIV LXPDSKTAPA
FSXPDLHGKT VSNADLQGKV 51 TLINFWFPSC PGCVSXMPKI IKTANDYKXK
NFQVLAVAQP IDPIESVRQY 101 VKDYGLPFTV MYDADKAVGQ AFGTQVYPTS
VLIGK*GEIF KTYVGEPDFG 151 KLYQEIDTRV AQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 544
shows 90.7% identity over a 162 aa overlap with a predicted ORF
(ORF 544.ng) from N. gonorrhoeae:
TABLE-US-01933 m544/g544 10 20 30 40 50 60 m544.pep
MXKILTAAVVALIGILLAIVLXPDSKTAPAFSXPDLHGKTVSNADLQGKVTLINFWFPSC |
||||||:||||||||| || |||||||||| ||||||||||||||||||||||||||| g544
MKKILTAAAVALIGILLATVLIPDSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSC 10 20
30 40 50 60 70 80 90 100 110 120 m544.pep
PGCVSXMPKIIKTANDYKXKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQ |||||
|||: ||||||| |:|||||||||||||||||||||||||||||:||||||||| g544
PGCVSEMPKVTKTANDYKNKDFQVLAVAQPIDPIESVRQYVKDYGLPFTVIYDADKAVGQ 70 80
90 100 110 120 130 140 150 160 m544.pep
AFGTQVYPTSVLIGKXGEIFKTYVGEPDFGKLYQEIDTRVAQX |||||||||||||||
|||:|||||||||||||||||| :||| g544
AFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTALAQX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1589>:
TABLE-US-01934 a544.seq 1 ATGAAAAAAA TACTCACCGC CGCCGTCGTC
GCACTGATCG GCATCCTCCT 51 TGCCATCGTC CTCATCCCCG ACAGCAAAAC
CGCGCCCGCT TTCTCCCTGT 101 CCGANCTGCA CGGAAAAANC GTTTNCAACG
CCGACCTGCA AGGCNAAGTT 151 ANCCTGATTA ANTTTTGGTT TCCCTCCTGT
CCGGGTTGTG TGAGCGAAAT 201 GNCCANAATC ATTAAAACGG CAAATGACTA
TAAAAACAAA AACTTCCAAG 251 TCCTTGCCGT CGCCCAGCCC ATCGATCCGA
TAGAAAGCGT CCGCCAATAT 301 GTCAAAGACT ACGGTTTGCC GTTTACCGTC
ATGTATGATG CGGACAAAGC 351 TGTCGGACAG GCGTTCGGCA CACAGGTTTA
TCCGACTTCC GTCCTTATCG 401 GCAAAAAAGG CGAAATCCTC AAAACTTATG
TCGGCGAACC CGATTTCGGC 451 AAACTCTACC AAGAAATCGA TACCGCGCTG
GCACAATAG
This corresponds to the amino acid sequence <SEQ ID 1590; ORF
544.a>:
TABLE-US-01935 a544.pep 1 MKKILTAAVV ALIGILLAIV LIPDSKTAPA
FSLSXLHGKX VXNADLQGXV 51 XLIXFWFPSC PGCVSEMXXI IKTANDYKNK
NFQVLAVAQP IDPIESVRQY 101 VKDYGLPFTV MYDADKAVGQ AFGTQVYPTS
VLIGKKGEIL KTYVGEPDFG 151 KLYQEIDTAL AQ* m544/a544 88.9% identity
in 162 aa overlap 10 20 30 40 50 60 m544.pep
MXKILTAAVVALIGILLAIVLXPDSKTAPAFSXPDLHGKTVSNADLQGKVTLINFWFPSC |
||||||||||||||||||| |||||||||| ||||:| |||||| |:|| |||||| a544
MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLSXLHGKXVXNADLQGXVXLIXFWFPSC 10 20
30 40 50 60 70 80 90 100 110 120 m544.pep
PGCVSXMPKIIKTANDYKXKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQ |||||
| ||||||||| ||||||||||||||||||||||||||||||||||||||||| a544
PGCVSEMXXIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQ 70 80
90 100 110 120 130 140 150 160 m544.pep
AFGTQVYPTSVLIGKXGEIFKTYVGEPDFGKLYQEIDTRVAQX |||||||||||||||
|||:|||||||||||||||||| :||| a544
AFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTALAQX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1591>:
TABLE-US-01936 g547.seq 1 atgttcgtag ataacggatt taataaaacg
gtagcgagtt ttgcccaaat 51 cgtcgaaact ttcgacgtat tcttctttag
gaacgattgc gcctttttta 101 cgcagatgaa acagcggtgc ggttgggtct
gctcgttggt atatctcgtt 151 gatatattta caagatgcgg cttcgagatt
ccgaaccgct cctttaaaga 201 gcttgggctt ttgatacaga taagtctgtc
ggaacgtttt aggactaatg 251 ccgaagtcga gatggatgcc cattacttcc
ccttactcag aaaatattta 301 aaatttataa tgttacatat agttacaaat
attagagttt tttgtgtgtg 351 cgtcaaggaa ttgttgacaa ttttagttaa
aaatttgtct ccaaacggaa 401 aaaagcggtt tgttttttgt tgttaa
This corresponds to the amino acid sequence <SEQ ID 1592; ORF
547.ng>:
TABLE-US-01937 g547.pep 1 MFVDNGFNKT VASFAQIVET FDVFFFRNDC
AFFTQMKQRC GWVCSLVYLV 51 DIFTRCGFEI PNRSFKELGL LIQISLSERF
RTNAEVEMDA HYFPLLRKYL 101 KFIMLHIVTN IRVFCVCVKE LLTILVKNLS
PNGKKRFVFC C*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1593>:
TABLE-US-01938 m547.seq 1 ATGTTCGTAG ATAACGGATT TAATAAAACG
GTAGCGAGTT TTGCCCAAAT 51 CGTCGAAACT TTCGACGTAT TCTTCTTTAG
GAACGATTGC GCCTTTTTTA 101 CGCAGATGAA ACAGCGGTGC GGTTGGGTCT
GCTCGTTGGT ATATCTCGTT 151 GATATCTTTC CAAGATGCGG ATTCGAGATT
CCGAACCGCT CCTTTAAAGA 201 GCTTGGGCTT TTGATACAGA TAAGTCTGTC
GGAACGTTTT AGGACTAATG 251 CCGAAGTCGA GATGGATGCT CATTACTTCC
CCTTACTCAG AAAATATTTA 301 AAATTTATAA TGTTACATAT ATTTACAAAT
ATTAAAGTTT TTTwTTGTGT 351 GTGCGTCAAG GAATTGTTGA CAATTTTAGT
TAAAAATTTG TCTCCAAACG 401 GAAAAAAGCG GTTTGTTTTT TGTTGTTAA
This corresponds to the amino acid sequence <SEQ ID 1594; ORF
547>:
TABLE-US-01939 m547.pep 1 MFVDNGFNKT VASFAQIVET FDVFFFRNDC
AFFTQMKQRC GWVCSLVYLV 51 DIFPRCGFEI PNRSFKELGL LIQISLSERF
RTNAEVEMDA HYFPLLRKYL 101 KFIMLHIFTN IKVFXCVCVK ELLTILVKNL
SPNGKKRFVF CC*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 547
shows 97.2% identity over a 142 aa overlap with a predicted ORF
(ORF 547.ng) from N. gonorrhoeae:
TABLE-US-01940 m547/g547 10 20 30 40 50 60 m547.pep
MFVDNGFNKTVASFAQIVETFDVFFFRNDCAFFTQMKQRCGWVCSLVYLVDIFPRCGFEI
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| g547
MFVDNGFNKTVASFAQIVETFDVFFFRNDCAFFTQMKQRCGWVCSLVYLVDIFIRCGFEI 10 20
30 40 50 60 70 80 90 100 110 120 m547.pep
PNRSFKELGLLIQISLSERFRTNAEVEMDAHYFPLLRKYLKFIMLHIFTNIKVFXCVCVK
||||||||||||||||||||||||||||||||||||||||||||||| |||:|| ||||| g547
PNRSFKELGLLIQISLSERFRTNAEVEMDAHYFPLLRKYLKFIMLHIVTNIRVF-CVCVK 70 80
90 100 110 130 140 m547.pep ELLTILVKNLSPNGKKRFVFCCX
||||||||||||||||||||||| g547 ELLTILVKNLSPNGKKRFVFCCX 120 130
140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1595>:
TABLE-US-01941 a547.seq 1 ATGTTCGTAG ATAACGGATT TAATAAAACG
GTAGCGAGTT TTGCCCAAAT 51 CGTCGAAACT TTCGACGTAT TCTTCTTTAG
GAACAATTGC ACCTTTTTTA 101 CGCAGATGAA ACAGCGGTGC GGTTGGGTCT
GCTCGTTGGT ATATCTCGTT 151 GATATCTTTC CAAGATGCGG CTTCGAGATT
CCGAACCGCT CCTTTAAAGA 201 GCTTGGGCTT TTGATACAGA TAAGTCTGTC
GGAACGTTTT AGGACTAATG 251 CCGAAGTCGA GATAGATGCT CATTACTTCC
CCTTACTCAG AAAATATTTA 301 AAATTTATAA TGTTACATAT ATTTACAAAT
ATTAAAGTTT TTTT.TGTGT 351 GTGCGTCAAG GAATTGTTGA CAATTTTAGT T
This corresponds to the amino acid sequence <SEQ ID 1596; ORF
547.a>:
TABLE-US-01942 a547.pep 1 MFVDNGFNKT VASFAQIVET FDVFFFRNNC
TFFTQMKQRC GWVCSLVYLV 51 DIFPRCGFEI PNRSFKELGL LIQISLSERF
RTNAEVEIDA HYFPLLRKYL 101 KFIMLHIFTN IKVFXCVCVK ELLTILV m547/a547
97.6% identity in 127 aa overlap 10 20 30 40 50 60 m547.pep
MFVDNGFNKTVASFAQIVETFDVFFFRNDCAFFTQMKQRCGWVCSLVYLVDIFPRCGFEI
||||||||||||||||||||||||||||:|:||||||||||||||||||||||||||||| a547
MFVDNGFNKTVASFAQIVETFDVFFFRNNCIFFTQMKQRCGWVCSLVYLVDIFPRCGFEI 10 20
30 40 50 60 70 80 90 100 110 120 m547.pep
PNRSFKELGLLIQISLSERFRTNAEVEMDAHYFPLLRKYLKFIMLHIFTNIKVFXCVCVK
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a547
PNRSFKELGLLIQISLSERFRINAEVEIDAHYFPLLRKYLKFIMLHIFTNIKVFXCVCVK 70 80
90 100 110 120 130 140 m547.pep ELLTILVKNLSPNGKKRFVFCCX |||||||
a547 ELLTILV
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1597>:
TABLE-US-01943 g548.seq 1 atgttttccg taccgcgttc ctttttgccg
ggcgttttcg tacttgccgc 51 gcttgccgcc tgcaaacctc aagacaacag
tgcggcgcaa gccgcttctt 101 caagtgcatc cgcgccggct gcggaaaatg
cggcaaagcc gcaaacgcgc 151 ggtacggata tgcgtaagga agacatcggc
ggcgatttca cactgaccga 201 cggcgaaggc aagcctttca gcctgagcga
tttgaaaggc aaggtcgtga 251 ttctgtcttt cggctttacg cactgtcccg
atgtctgccc gacagggctt 301 ttgacgtaca gcgacacttt gaagcagttg
ggcgggcagg ctaaggacgt 351 gaaagtggtg ttcgtcagca tcgatccgga
acgcgacacg cctgaaatca 401 tcggcaagta tgccaaacag ttcaatccgg
actttatcgg tctgacggca 451 acgggcggcc aaaacctgcc ggtcatcaag
cagcaatacc gcgtggtttc 501 tgccaaaatc aatcaaaaag acgacagcga
aaactatttg gtcgaccact 551 cttccggtgc gtatcttatc gataaaaacg
gtgaggttgc cattttctcg 601 ccttacggaa gcgagccgga aacgattgct
gccgatgtaa ggaccctgct 651 ctga
This corresponds to the amino acid sequence <SEQ ID 1598; ORF
548. ng>:
TABLE-US-01944 g548.pep 1 MFSVPRSFLP GVFVLAALAA CKPQDNSAAQ
AASSSASAPA AENAAKPQTR 51 GTDMRKEDIG GDFTLTDGEG KPFSLSDLKG
KVVILSFGFT HCPDVCPTGL 101 LTYSDTLKQL GGQAKDVKVV FVSIDPERDT
PEIIGKYAKQ FNPDFIGLTA 151 TGGQNLPVIK QQYRVVSAKI NQKDDSENYL
VDHSSGAYLI DKNGEVAIFS 201 PYGSEPETIA ADVRTLL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1599>:
TABLE-US-01945 m548.seq 1 ATGTTTTCCG TACCGCGTTC CTTTTTGCCG
GGCGTTTTCG TACTTGCCGC 51 GCTTGCCGCC TGCAAACCTC AAGACAACAG
TGCGGCGCAA GTCGCTTCTT 101 CAAGTGCATC CGCGTCGGCT GCGGAAAATG
CGGCAAAGCA AnACACGCGC 151 GGTACGGATA TGCGTAAGGA AGACATCGGC
GGCGATTTCA CGCTGACCGA 201 CGGCGAAGGC AAGCCTTTCA ACCTGAGCGA
TTTGAAAGGC AAGGTCGTGA 251 TTCTGTCTTT CGGCTTTACG CACTGTCCCG
ATGTCTGCCC GACAGAGCTT 301 TTGACGTACA GCGACACGTT GAAGCAGTTG
GGCGGGCAGG CTAAGGACGT 351 GAAAGTGGTG TTCGTCAGCA TCGATCCGGA
ACGCGACACG CCTGAAATCA 401 TCGGCAAGTA TGCCAAACAG TTCAATCCGG
ACTTTATCGs TCTGACGGCA 451 ACGGGCGGCC AAAACCTGCC GGTCATCAAG
CAGCAATACc GCGTGGTTTC 501 TGCCAAAGTC AATCAAAAmG ACGACAGCGA
AAACTATTTG GTCGACCACT 551 CTTCCGGTGC GTATCTCATC GACAAAAACG
GTGAGGTTGC CATTTTCTCG 601 CCTTACGGAA GCGAGCCGGA AACGATTGCT
GCCGATGTAA GGACCCTGCT 651 CTGA
This corresponds to the amino acid sequence <SEQ ID 1600; ORF
548>:
TABLE-US-01946 m548.pep 1 MFSVPRSFLP GVFVLAALAA CKPQDNSAAQ
VASSSASASA AENAAKQXTR 51 GTDMRKEDIG GDFTLTDGEG KPFNLSDLKG
KVVILSFGFT HCPDVCPTEL 101 LTYSDTLKQL GGQAKDVKVV FVSIDPERDT
PEIIGKYAKQ FNPDFIXLTA 151 TGGQNLPVIK QQYRVVSAKV NQXDDSENYL
VDHSSGAYLI DKNGEVAIFS 201 PYGSEPETIA ADVRTLL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 548
shows 95.9% identity over a 217 aa overlap with a predicted ORF
(ORF 548.ng) from N. gonorrhoeae:
TABLE-US-01947 m548/g548 10 20 30 40 50 60 m548.pep
MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENAAKQXTRGTDMRKEDIG
||||||||||||||||||||||||||||||:||||||| ||||||| |||||||||||| g548
MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASAPAAENAAKPQTRGTDMRKEDIG 10 20
30 40 50 60 70 80 90 100 110 120 m548.pep
GDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTYSDTLKQLGGQAKDVKVV
|||||||||||||:|||||||||||||||||||||||| ||||||||||||||||||||| g548
GDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTGLLTYSDTLKQLGGQAKDVKVV 70 80
90 100 110 120 130 140 150 160 170 180 m548.pep
FVSIDPERDTPEIIGKYAKQFNPDFIXLTATGGQNLPVIKQQYRVVSAKVNQXDDSENYL
|||||||||||||||||||||||||| ||||||||||||||||||||||:|| ||||||| g548
FVSIDPERDTPETIGKYAKQFNPDFIGLTATGGQNLPVIKQQYRVVSAKINQKDDSENYL 130
140 150 160 170 180 190 200 210 m548.pep
VDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLLX
|||||||||||||||||||||||||||||||||||||| g548
VDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLLX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1601>:
TABLE-US-01948 a548.seq 1 ATGTTTTCCG TACCGCGTTC CTTTTTGCCG
GGCGTTTTCG TACTTGCCGC 51 GCTTGCCGCC TGCAAACCTC AAGACAACAG
TGCGGCGCAA GTCGCTTCTT 101 CAAGTGCATC CGCGTCGGCT GCGGAAAATG
CGGCAAAGCC GCAAACGCGC 151 GGTACGGATA TGCGTAAGGA AGACATCGGC
GGCGATTTCA CGCTGACCGA 201 CGGCGAAGGC AAGCCTTTCA ACCTGAGCGA
TTTGAAAGGC AAGGTCGTGA 251 TTCTGTCTTT CGGCTTTACG CACTGTCCCG
ATGTCTGCCC GACAGAGCTT 301 TTGACGTACA GCGACACGTT GAAGCAGTTG
GGCGGGCAGG CTAAGGACGT 351 GAAAGTGGTG TTCGTCAGCA TCGATCCGGA
ACGCGACACG CCTGAAATCA 401 TCGGCAAGTA TGCCAAACAG TTCAATCCGG
ACTTTATCGG TCTGACGGCA 451 ACGGGCGACC AAAACCTGCC GGTCATCAAG
CAGCAATACC GCGTGGTTTC 501 TGCCAAAGTC AATCAAAAAG ACGACAGCGA
AAACTATTTG GTCGACCACT 551 CTTCCGGTGC GTATCTCATC GACAAAAACG
GTGAGGTTGC CATTTTCTCG 601 CCTTACGGAA GCGAGCCGGA AACGATTGCT
GCCGATGTAA GGACCCTGCT 651 CTGA
This corresponds to the amino acid sequence <SEQ ID 1602; ORF
548.a>:
TABLE-US-01949 a548.pep 1 MFSVPRSFLP GVFVLAALAA CKPQDNSAAQ
VASSSASASA AENAAKPQTR 51 GTDMRKEDIG GDFTLTDGEG KPFNLSDLKG
KVVILSFGFT HCPDVCPTEL 101 LTYSDTLKQL GGQAKDVKVV FVSIDPERDT
PEIIGKYAKQ FNPDFIGLTA 151 TGDQNLPVIK QQYRVVSAKV NQKDDSENYL
VDHSSGAYLI DKNGEVAIFS 201 PYGSEPETIA ADVRTLL* m548/a548 97.7%
identity in 217 aa overlap 10 20 30 40 50 60 m548.pep
MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENAAKQXTRGTDMRKEDIG
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| a548
MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENAAKPQTRGTDMRKEDIG 10 20
30 40 50 60 70 80 90 100 110 120 m548.pep
GDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTYSDTLKQLGGQAKDVKVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a548
GDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTYSDTLKQLGGQAKDVKVV 70 80
90 100 110 120 130 140 150 160 170 180 m548.pep
FVSIDPERDTPEIIGKYAKQFNPDFIXLTATGGQNLPVIKQQYRVVSAKVNQXDDSENYL
|||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| a548
FVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIKQQYRVVSAKVNQKDDSENYL 130
140 150 160 170 180 190 200 210 m548.pep
VDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLLX
|||||||||||||||||||||||||||||||||||||| a548
VDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLLX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1603>:
TABLE-US-01950 g550.seq 1 atgataacgg acaggtttca tctctttcat
tttccagtat ctttcattta 51 tcaatctgac aacaaaatgc cgcctgaaaa
cagttcagac ggcattttaa 101 ccacaaacgg cttacagctt ccattcgccc
aacttggcag cgtaagcttc 151 caaatctgca atcggacggg ttgccacgcc
gctttccatc gctgctttgg 201 cggcagccgt agcgacgcga ggcagcaggc
gggaatcgaa cggagtagga 251 atcaggtatt ccgcgccgaa ttcgaatttc
ttaccgtaag cggcaaccac 301 ttcttcggtt acttcttcca tcgccaaatc
tgccaaagca tacacgcagg 351 cgcgtttcat ttcttcgttg atggtggttg
cgccgacatc caacgcgccc 401 cggaagatga acgggaagca caatacgttg
ttcacttggt tcgggaagtc 451 ggagcggccg gtaccgataa ccacgtccgg
acgggtttct ttcgccagcg 501 gcggcaggat ttccggattc gggttggcca
tggcgaacac gatgggtttt 551 tcgttcatcg tgttcaacat ttcaggcgtc
agcaggtttg cgccggagag 601 gcccaagaag atgtctttgc ctttaaccgc
atcggcaagt acgcgccggc 651 cgttgtcttc aacggcgtag aattttttgg
attcgtccat gcggtctttg 701 tcttcgcggg tttggtaaat cacgcctttg
gagttgcaaa cggttacgtt 751 ttcacgtttc aagcccaaat ccagcagttg
gttcaggcag gcaatcgcgg 801 cggcacctgc gccggagcac accaaagtcg
cttcttcgat tttacggccg 851 gtataacgca gggcgttcaa tacggcggcg
gcggtaatga tggccgtgcc 901 gtgctggtca tcatgaaata cggggatttt
gcagcgtttg cgtaa
This corresponds to the amino acid sequence <SEQ ID 1604; ORF
550.ng>:
TABLE-US-01951 g550.pep 1 MITDRFHLFH FPVSFIYQSD NKMPPENSSD
GILTTNGLQL PFAQLGSVSF 51 QICNRTGCHA AFHRCFGGSR SDARQQAGIE
RSRNQVFRAE FEFLTVSGNH 101 FFGYFFHRQI CQSIHAGAFH FFVDGGCADI
QRAPEDEREA QYVVHLVREV 151 GAAGTDNHVR TGFFRQRRQD FRIRVGHGEH
DGFFVHRVQH FRRQQVCAGE 201 AQEDVFAFNR IGKYAPAVVF NGVEFFGFVH
AVFVFAGLVN HAFGVANGYV 251 FTFQAQIQQL VQAGNRGGTC AGAHQSRFFD
FTAGITQGVQ YGGGGNDGRA 301 VLVIMKYGDF AAFA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1605>:
TABLE-US-01952 m550.seq (partial) 1 ..GACGGCATCG GCAAGCACGC
GCTGGCCGTT GTCTTCAATG GCGTAGAACT 51 GTTTGGACTC GTCCATACGG
TCTTTGTCTT CGCGGGTTTG GTAAATCACG 101 CCTTTGGAGT CGCAAACGGT
CACGTTTTCG CGTTTCAAGC CCAAATCCAG 151 CAATTGGwTC AAGCAGGCAA
TCGCGGCCGC ACCTGCGCCG GAACACACCA 201 AAGTCGCTTC TTCGATTTTA
CGGCCGGTAA AACGCAkGGC GTTCAATACG 251 GCGGCGGCGG TAATGATGGC
CGTGCCGTGC TGGTCGTCGT GGAATACGGG 301 GATTTTGCAG CGTTTGCGTA A
This corresponds to the amino acid sequence <SEQ ID 1606; ORF
550>:
TABLE-US-01953 m550.pep (partial) 1 ..DGIGKHALAV VFNGVELFGL
VHTVFVFAGL VNHAFGVANG HVFAFQAQIQ 51 QLXQAGNRGR TCAGTHQSRF
FDFTAGKTXG VQYGGGGNDG RAVLVVVEYG 101 DFAAFA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 550
shows % identity over a aa overlap with a predicted ORF (ORF
550.ng) from N. gonorrhoeae:
TABLE-US-01954 m550/g550 10 20 30 m550.pep
DGIGKHALAVVFNGVELFGLVHTVFVFAGLVN |||:| ||||||||:||:||:|||||||||
g550 DGFFVHRVQHFRRQQVCAGEAQEDVFAFNRIGKYAPAVVFNGVEFFGFVHAVFVFAGLVN
190 200 210 220 230 240 40 50 60 70 80 90 m550.pep
HAFGVANGHVFAFQAQIQQLXQAGNRGRTCAGTHQSRFFDFTAGKTXGVQYGGGGNDGRA
||||||||:||:|||||||| |||||| ||||:||||||||||| | ||||||||||||| g550
HAFGVANGYVFTFQAQIQQLVQAGNRGGTCAGAHQSRFFDFTAGITQGVQYGGGGNDGRA 250
260 270 280 290 300 100 m550.pep VLVVVEYGDFAAFAX |||:::|||||||||
g550 VLVIMKYGDFAAFAX 310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1607>:
TABLE-US-01955 a550.seq 1 CTATATCAAT CTGACAGCAA AATGCCGCCT
GAAAACAGTT CAGACGGCAT 51 TTTAACCGCA AACGGCTTAC AGCTTCCATT
CGCTCAGCTT GGCAGCGTAA 101 GCTTCCAAAT CTGCAATCGG ACGGGTTGCC
ACGCCGCTTT CCATCGCTGC 151 TTTGGCGGCA GCCGTAGCAA CGCGCGGCAG
CAGGCGGGAA TCGAACGGAG 201 TCGGAATCAG GTATTCCGCG CCGAATTCAA
ATTTCTTACC GTAAGCGGCA 251 ACCACTTCTT CGGTTACCTC TTCCATCGCC
AAATCCGCCA AAGCATACAC 301 GCAGGCGCGT TTCATTTCTT CGTTGATGGT
CGTCGCGCCG ACATCCAACG 351 CACCGCGGAA GATGAACGGG AAGCACAATA
CATTGTTCAC TTGGTTCGGG 401 AAGTCGGAGC GGCCGGTACC GATAACCACG
TCCGGACGGG TTTCTTTCGC 451 CAGCGGCGGC AGGATTTCCG GATTCGGGTT
GGCCATAGCG AACACGATGG 501 GTTTTTCGTT CATGGTGTTC AGTATTTCAG
GCGTCAGCAG GTTCGCGCCG 551 GAGAGGCCCA AGAAGATGTC TTTGCCTTTG
ACGGCATCGG CAAGCACGCG 601 CTGGCCGTTG TCTTCAATGG CGTAGAACTG
TTTGGACTCG TCCATACGGT 651 CTTTGTCTTC GCGGGTTTGG TAAATCACGC
CTTTGGAGTC GCAAACGGTC 701 ACGTTTTCGC GTTTCAAGCC CAAATCCAGC
AATTGGTTCA AGCAGGCAAT 751 CGCGGCCGCA CCTGCGCCGG AACACACCAA
AGTCGCTTCT TCGATTTTAC 801 GGCCGGTAAA ACGCAGGGCG TTCAATACGG
CAGCGGCGGT AATGATGGCC 851 GTGCCGTGCT GGTCGTCGTG GAATACGGGG
ATTTTGCAGC GTTTGCGTAA
This corresponds to the amino acid sequence <SEQ ID 1608; ORF
550.a>:
TABLE-US-01956 a550.pep 1 LYQSDSKMPP ENSSDGILTA NGLQLPFAQL
GSVSFQICNR TGCHAAFHRC 51 FGGSRSNARQ QAGIERSRNQ VFRAEFKFLT
VSGNHFFGYL FHRQIRQSIH 101 AGAFHFFVDG RRADIQRTAE DEREAQYIVH
LVREVGAAGT DNHVRTGFFR 151 QRRQDFRIRV GHSEHDGFFV HGVQYFRRQQ
VRAGEAQEDV FAFDGIGKHA 201 LAVVFNGVEL FGLVHTVFVF AGLVNHAFGV
ANGHVFAFQA QIQQLVQAGN 251 RGRTCAGTHQ SRFFDFTAGK TQGVQYGSGG
NDGRAVLVVV EYGDFAAFA* m550/a550 97.2% identity in 106 aa overlap 10
20 30 m550.pep DGIGKHALAVVFNGVELFGLVHTVFVFAGL
|||||||||||||||||||||||||||||| a550
EHDGFFVHGVQYFRRQQVRAGEAQEDVFAFDGIGKHALAVVFNGVELFGLVHTVFVFAGL 170
180 190 200 210 220 40 50 60 70 80 90 m550.pep
VNHAFGVANGHVFAFQAQIQQLXQAGNRGRTCAGTHQSRFFDFTAGKTXGVQYGGGGNDG
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||:||||| a550
VNHAFGVANGHVFAFQAQIQQLVQAGNRGRTCAGTHQSRFFDFTAGKTQGVQYGSGGNDG 230
240 250 260 270 280 100 m550.pep RAVLVVVEYGDFAAFAX
||||||||||||||||| a550 RAVLVVVEYGDFAAFAX 290 300
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1609>:
TABLE-US-01957 g552.seq 1 atgaagctga aaaccttgtt attgcccttc
gccgcactgg cattgtgtgc 51 caacgcattt gccgccccgc ccggcgacgc
gtcgttggca cgttggctgg 101 atacgcagaa tttcgaccgg gatatagaaa
aaaatatgat tgaaggcttt 151 aatgccggat ttaaaccgta tgcggacaaa
gcccttgccg aaatgccgga 201 agcgaaaaaa gatcaggcgg cagaagcctt
taatcgttat cgtgagaatg 251 ttttgaaaga tttgattacg cccgaagtga
aacaggctgt ccgcaatacc 301 ttattgaaga atgcccgtga aatatacacg
caagaagaaa ttgacggcat 351 gattgccttt tacggttcgc ctgtcggtca
gtccgtcgtt gccaaaaatc 401 cgcgcttaat caagaaatcg atgagtgaaa
tagcggtatc ttggactgca 451 ttgtcaggga aaatcgcgcg acatcatctg
cccgagttta cggaagagtt 501 acggcgcatc atctgcggcg gtatagtgga ttaa
This corresponds to the amino acid sequence <SEQ ID 1610;
ORF552.ng>:
TABLE-US-01958 g552.pep 1 MKLKTLLLPF AALALCANAF AAPPGDASLA
RWLDTQNFDR DIEKNMIEGF 51 NAGFKPYADK ALAEMPEAKK DQAAEAFNRY
RENVLKDLIT PEVKQAVRNT 101 LLKNAREIYT QEEIDGMIAF YGSPVGQSVV
AKNPRLIKKS MSEIAVSWTA 151 LSGKIARHHL PEFTEELRRI ICGGIVD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1611>:
TABLE-US-01959 m552.seq (partial) 1 ..ATTAAACTGA AAACCTTGTT
ATTGCCCTTC GCCACGCTGG CATTGTGCAC 51 CAATGCTTTT GCCGCCCCGC
CCAGCGACGC GTCGTTGGCG CGTTGGCTGG 101 ATACGCAGAA TTTTGACCGG
GATATAGAAA AAAATATGAT TGAGGGCTTT 151 AATGCCGGAT TTAAACCGTA
TGCGGACAAA GCCCTTGCCG AAATGCCGGA 201 AGCGAAAAAA GATCAGGCGG
CAGAAGCCTT TAACCGTTAT CGTGAGAATG 251 TTTTGAAAGA TTTGATTACG
CCCGAAGTGA AACAGGCTGT CCGCAATACT 301 TTATTGAAGA ATGCCCGTGA
GATATACACG CAAGAAGAAA TTGACGGCAT 351 GATTGCCTTT TACGGTTCGC
CTGTCGGTCA GTCCGTCGTT GCCAAAAATC 401 CGCGCTTAAT CAAGAAATCG
ATGAGTGAAA TAGCGGTATC TTGGACTGCA 451 TTGTCAGGGA AAATCGCGCA
ACATCATCTG CCCGAGTTTA CGGAAGAGTT 501 GCGGCGCATC ATCTGCGGCG
GTAAAAATCC CGATGCGGGC TGTAAACAAG 551 CCGGACAGGT TGGGAAAAGG
CATCAGAAAT AA
This corresponds to the amino acid sequence <SEQ ID 1612; ORF
552>:
TABLE-US-01960 m552.pep (partial) 1 ..IKLKTLLLPF ATLALCTNAF
AAPPSDASLA RWLDTQNFDR DIEKNMIEGF 51 NAGFKPYADK ALAEMPEAKK
DQAAEAFNRY RENVLKDLIT PEVKQAVRNT 101 LLKNAREIYT QEEIDGMIAF
YGSPVGQSVV AKNPRLIKKS MSEIAVSWTA 151 LSGKIAQHHL PEFTEELRRI
ICGGKNPDAG CKQAGQVGKR HQK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 552
shows 97.1% identity over a 174 aa overlap with a predicted ORF
(ORF 552.ng) from N. gonorrhoeae:
TABLE-US-01961 m552/g552 10 20 30 40 50 60 m552.pep
IKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYADK
:||||||||||:||||:|||||||:||||||||||||||||||||||||||||||||||| g552
MKLKTLLLPFAALALCANAFAAPPGDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYADK 10 20
30 40 50 60 70 80 90 100 110 120 m552.pep
ALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMIAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g552
ALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMIAF 70 80
90 100 110 120 130 140 150 160 170 180 m552.pep
YGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIAQHHLPEFTEELRRIICGGKNPDAG
||||||||||||||||||||||||||||||||||||:||||||||||||||||| g552
YGSPVGQSVVAKNPRLIKKSMSEIAVSWIALSGKIARHHLPEFTEELRRIICGGIVDX 130 140
150 160 170 190 m552.pep CKQAGQVGKRHQKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1613>:
TABLE-US-01962 a552.seq 1 ATTAAACTGA AAACCTTGTT ATTGCCCTTC
GCCACGCTGG CATTGTGCAC 51 CAATGCTTTT GCCGCCCCGC CCAGCGACGC
GTCGTTGGCG CGTTGGCTGG 101 ATACGCAGAA TTTTGACCGG GATATAGAAA
AAAATATGAT TGAGGGCTTT 151 AATGCCGGAT TTAAACCGTA TGCGGACAAA
GCCCTTGCCG AAATGCCGGA 201 AGCGAAAAAA GATCAGGCGG CAGAAGCCTT
TAACCGTTAT CGTGAGAATG 251 TTTTGAAAGA TTTGATTACG CCCGAAGTGA
AACAGGCTGT CCGCAATACT 301 TTATTGAAGA ATGCCCGTGA GATATACACG
CAAGAAGAAA TTGACGGCAT 351 GATTGCCTTT TACGGTTCGC CTGTCGGTCA
GTCCGTCGTT GCCAAAAATC 401 CGCGCTTAAT CAAGAAATCG ATGAGTGAAA
TAGCGGTATC TTGGACTGCA 451 TTGTCAGGGA AAATCGCGCA ACATCATCTG
CCCGAGTTTA CGGAAGAGTT 501 GCGGCGCATC ATCTGCGGCG GTAAAAATCC
CGATGCGGGC TGTAAACAAG 551 CCGGACAGGT TGGGAAAAGG CATCAGAAAT AA
This corresponds to the amino acid sequence <SEQ ID 1614; ORF
552.a>:
TABLE-US-01963 a552.pep 1 IKLKTLLLPF ATLALCTNAF AAPPSDASLA
RWLDTQNFDR DIEKNMIEGF 51 NAGFKPYADK ALAEMPEAKK DQAAEAFNRY
RENVLKDLIT PEVKQAVRNT 101 LLKNAREIYT QEEIDGMIAF YGSPVGQSVV
AKNPRLIKKS MSEIAVSWTA 151 LSGKIAQHHL PEFTEELRRI ICGGKNPDAG
CKQAGQVGKR HQK* m552/a552 100.0% identity in 193 aa overlap 10 20
30 40 50 60 m552.pep
IKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYADK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a552
IKLKILLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYADK 10 20
30 40 50 60 70 80 90 100 110 120 m552.pep
ALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMIAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a552
ALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMIAF 70 80
90 100 110 120 130 140 150 160 170 180 m552.pep
YGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIAQHHLPEFTEELRRIICGGKNPDAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a552
YGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIAQHHLPEFTEELRRIICGGKNPDAG 130
140 150 160 170 180 190 m552.pep CKQAGQVGKRHQKX |||||||||||||| a552
CKQAGQVGKRHQKX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1615>:
TABLE-US-01964 m552-1.seq 1 TTGAATATTA AACTGAAAAC CTTGTTATTG
CCCTTCGCCA CGCTGGCATT 51 GTGCACCAAT GCTTTTGCCG CCCCGCCCAG
CGACGCGTCG TTGGCGCGTT 101 GGCTGGATAC GCAGAATTTT GACCGGGATA
TAGAAAAAAA TATGATTGAG 151 GGCTTTAATG CCGGATTTAA ACCGTATGCG
GACAAAGCCC TTGCCGAAAT 201 GCCGGAAGCG AAAAAAGATC AGGCGGCAGA
AGCCTTTAAC CGTTATCGTG 251 AGAATGTTTT GAAAGATTTG ATTACGCCCG
AAGTGAAACA GGCTGTCCGC 301 AATACTTTAT TGAAGAATGC CCGTGAGATA
TACACGCAAG AAGAAATTGA 351 CGGCATGATT GCCTTTTACG GTTCGCCTGT
CGGTCAGTCC GTCGTTGCCA 401 AAAATCCGCG CTTAATCAAG AAATCGATGA
GTGAAATAGC GGTATCTTGG 451 ACTGCATTGT CAGGGAAAAT CGCGCAACAT
CATCTGCCCG AGTTTACGGA 501 AGAGTTGCGG CGCATCATCT GCGGCGGTAA
AAATCCCGAT GCGGGCTGTA 551 AACAAGCCGG ACAGGTTGGG AAAAGGCATC
AGAAATAA
This corresponds to the amino acid sequence <SEQ ID 1616; ORF
552-1>:
TABLE-US-01965 m552-1.pep 1 LNIKLKTLLL PFATLALCTN AFAAPPSDAS
LARWLDTQNF DRDIEKNMIE 51 GFNAGFKPYA DKALAEMPEA KKDQAAEAFN
RYRENVLKDL ITPEVKQAVR 101 NTLLKNAREI YTQEEIDGMI AFYGSPVGQS
VVAKNPRLIK KSMSEIAVSW 151 TALSGKIAQH HLPEFTEELR RIICGGKNPD
AGCKQAGQVG KRHQK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1617>:
TABLE-US-01966 a552-1.seq 1 TTGAATATTA AACTGAAAAC CTTGTTATTG
CCCTTCGCCA CGCTGGCATT 51 GTGCACCAAT GCTTTTGCCG CCCCGCCCAG
CGACGCGTCG TTGGCGCGTT 101 GGCTGGATAC GCAGAATTTT GACCGGGATA
TAGAAAAAAA TATGATTGAG 151 GGCTTTAATG CCGGATTTAA ACCGTATGCG
GACAAAGCCC TTGCCGAAAT 201 GCCGGAAGCG AAAAAAGATC AGGCGGCAGA
AGCCTTTAAC CGTTATCGTG 251 AGAATGTTTT GAAAGATTTG ATTACGCCCG
AAGTGAAACA GGCTGTCCGC 301 AATACTTTAT TGAAGAATGC CCGTGAGATA
TACACGCAAG AAGAAATTGA 351 CGGCATGATT GCCTTTTACG GTTCGCCTGT
CGGTCAGTCC GTCGTTGCCA 401 AAAATCCGCG CTTAATCAAG AAATCGATGA
GTGAAATAGC GGTATCTTGG 451 ACTGCATTGT CAGGGAAAAT CGCGCAACAT
CATCTGCCCG AGTTTACGGA 501 AGAGTTGCGG CGCATCATCT GCGGCGGTAA
AAATCCCGAT GCGGGCTGTA 551 AACAAGCCGG ACAGGTTGGG AAAAGGCATC
AGAAATAA
This corresponds to the amino acid sequence <SEQ ID 1618; ORF
552-1.a>:
TABLE-US-01967 a552-1.pep 1 LNIKLKTLLL PFATLALCTN AFAAPPSDAS
LARWLDTQNF DRDIEKNMIE 51 GFNAGFKPYA DKALAEMPEA KKDQAAEAFN
RYRENVLKDL ITPEVKQAVR 101 NTLLKNAREI YTQEEIDGMI AFYGSPVGQS
VVAKNPRLIK KSMSEIAVSW 151 TALSGKIAQH HLPEFTEELR RIICGGKNPD
AGCKQAGQVG KRHQK* a552-1/m552-1 100.0% identity in 195 aa overlap
10 20 30 40 50 60 a552-1.pep
LNIKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m552-1
LNIKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEKNMIEGFNAGFKPYA 10 20
30 40 50 60 70 80 90 100 110 120 a552-1.pep
DKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m552-1
DKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLLKNAREIYTQEEIDGMI 70 80
90 100 110 120 130 140 150 160 170 180 a552-1.pep
AFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIAQHHLPEFTEELRRIICGGKNPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m552-1
AFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIAQHHLPEFTEELRRIICGGKNPD 130
140 150 160 170 180 190 a552-1.pep AGCKQAGQVGKRHQKX
|||||||||||||||| m552-1 AGCKQAGQVGKRHQKX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1619>:
TABLE-US-01968 g553.seq 1 atggattatc tgcaaaacct gtctttgggc
ttgacaaaaa agctgcccgt 51 tatactgcaa acagaagtag cggagtgtgg
cttggcatgt ctagcggctg 101 tggccggatt ttatggtttc tatacggatt
tgcgcgcact gcgttcaaaa 151 tactgtctgt cacttaaggg tgagaatttg
gcagatattg ttcgttttgc 201 tgatgatatg gggctgacgg gacgggcgtt
gaggctggat ttagacgaat 251 tgggcagttt gcgcctgccc tgtattctac
attgggattt gaatcatttt 301 gtggtgctgg aatcggtatc ttcggacggg
gctgccgtca tggatccggc 351 ttcgggacga cgcaaagtca agacggagga
aatatcgcgc aagtttacgg 401 gaattgcttt ggaactgtgg ccaaacacgc
gtttcgaggc aggggaagaa 451 aagcaggaaa tccgcatcct acccatgttg
cgcgggattt ctgggctggg 501 gcggacattg tttcagcttt tggctttggc
agcagcaatg gaagtgtttg 551 cttttttaca aaacgtcagc ttcaagatcg
gacgtggtga atcgcttgcg 601 ttaatcggac gatcgggctg cggtaaatcg
acacttttgg atattttaag 651 cggcaatcta cctcccgaat caggcaaagt
catgataaat gggcacgaca 701 tttacagctt accgccacct tttattccgc
aatttgagtg cgatggtcaa 751 ggcaggacga tgttttatag tggattaaat
ttaaaccggt ag
This corresponds to the amino acid sequence <SEQ ID 1620; ORF
553.ng>:
TABLE-US-01969 g553.pep 1 MDYLQNLSLG LTKKLPVILQ TEVAECGLAC
LAAVAGFYGF YTDLRALRSK 51 YCLSLKGENL ADIVRFADDM GLTGRALRLD
LDELGSLRLP CILHWDLNHF 101 VVLESVSSDG AAVMDPASGR RKVKTEEISR
KFTGIALELW PNTRFEAGEE 151 KQEIRILPML RGISGLGRTL FQLLALAAAM
EVFAFLQNVS FKIGRGESLA 201 LIGRSGCGKS TLLDILSGNL PPESGKVMIN
GHDIYSLPPP FIPQFECDGQ 251 GRTMFYSGLN LNR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1621>:
TABLE-US-01970 m553.seq (partial) 1 ATGGATTATT TATCAAGACT
GTCCTTTGGA TTTAACAAAA AGCTACCTGT 51 CATTCTGCAA ACAGAAGTTG
CTGAATGTGG TTTAGCATGC CTGACATCCA 101 TCTTGTCCTA TTATGGCTTT
CACACTGATT TAAGAACGTT ACGCCAAAAA 151 TACACCCTGT CATTAAAGGG
CGCAAATCTT GCAGACATCA TGAGATTTGG 201 CAATGAAATG AATTTAACGC
CACGAGCTTT GCGTTTAGAG TTAGATGAGC 251 TGTCAAATTT ACAACTACCC
TGCATTCTCC ATTGGAACTT AAACCATTTT 301 GTTGTACTTT GTTCCATTTC
CAAAGACAGT ATCGTCATTA TGGACCCTGC 351 TGTCGGTATG CGAAAAATCA
AAATGGACGA AGTTTCACAA AAATTCACAG 401 GGATTGCCCT AGAATTATTC
CCCAATACCC ATTTTGAAGA GAAAAAAGAA 451 ACAAAGAAAA TCAAAATATT
ATCTCTATTA AGGGGGGG.T CAGGCTTAAA 501 ACGCTCTTTA ATTCAAATGC
TTATATTAGC TATTTCTTTG GAAGTCTTTG 551 CATTG...
This corresponds to the amino acid sequence <SEQ ID 1622; ORF
553>:
TABLE-US-01971 m553.pep (partial) 1 MDYLSRLSFG FNKKLPVILQ
TEVAECGLAC LTSILSYYGF HTDLRTLRQK 51 YTLSLKGANL ADIMRFGNEM
NLTPRALRLE LDELSNLQLP CILHWNLNHF 101 VVLCSISKDS IVIMDPAVGM
RKIKMDEVSQ KFTGIALELF PNTHFEEKKE 151 TKKIKILSLL RGXSGLKRSL
IQMLILAISL EVFAL...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 553
shows 65.5% identity over a 185 aa overlap with a predicted ORF
(ORF 553.ng) from N. gonorrhoeae:
TABLE-US-01972 m553/g553 10 20 30 40 50 60 g553.pep
MDYLQNLSLGLTKKLPVILQTEVAECGLACLAAVAGFYGFYTDLRALRSKYCLSLKGENL ||||:
||:|::|||||||||||||||||||::: ::|||:||||:||:|| ||||| || m553
MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDLRTLRQKYTLSLKGANL 10 20
30 40 50 60 70 80 90 100 110 120 g553.pep
ADIVRFADDMGLTGRALRLDLDELGSLRLPCILHWDLNHFVVLESVSSDGAAVMDPASGR
|||:||:::|:|| |||||:||||::|:|||||||:||||||| |:|:|: ::|||| | m553
ADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVVLCSISKDSIVIMDPAVGM 70 80
90 100 110 120 130 140 150 160 170 180 g553.pep
RKVKTEEISRKFTGIALELWPNTRFEAGEEKQEIRILPMLRGISGLGRTLFQLLALAAAM ||:|
:|:|:|||||||||:|||:|| :| ::|:|| :||| ||| |:|:|:| || :: m553
RKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLLRGXSGLKRSLIQMLILAISL 130
140 150 160 170 180 190 200 210 220 230 240 g553.pep
EVFAFLQNVSFKIGRGESLALIGRSGCGKSTLLDILSGNLPPESGKVMINGHDIYSLPPP ||||:
m553 EVFAL
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1623>:
TABLE-US-01973 a553.seq 1 ATGCCCCATC TGCAAAACCT GTCTTTGGGC
TTAAAGAAAA AGCTGCCTGT 51 TATCCTGCAA ACAGAAATAT CAGAATGCGG
CTTGGCATGT CTGGCGGCTG 101 TGGCGGGATT TCATGGTTTC CATACGAATT
TACGCGCACT GCGTTCAAAA 151 TAC
This corresponds to the amino acid sequence <SEQ ID 1624; ORF
553.a>:
TABLE-US-01974 a553.pep 1 MPHLQNLSLG LKKKLPVILQ TEISECGLAC
LAAVAGFHGF HTNLRALRSK 51 Y m553/a553 62.7% identity in 51 aa
overlap 10 20 30 40 50 60 m553.pep
MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDLRTLRQKYTLSLKGANL | :|:
||:|::||||||||||::|||||||::: :::||||:||:||:|| a553
MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTNLRALRSKY 10 20 30 40 50
70 80 90 100 110 120 m553.pep
ADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVVLCSISKDSIVIMDPAVGM
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1625>:
TABLE-US-01975 g554.seq.. 1 atgacagcac ataaaatcct gcccgtcctt
cttcccatca tcttaggcgt 51 ttctcacgca acggctgcat cgcccgcgcc
caacagaccg acggtacacg 101 ccgcccccac gctccaaaca cccgaaaccc
tcacggcggc acacatcgtt 151 atcgaccttc aaagcaggca gactttatcc
gccaaaaaca ccaatacccc 201 tgtcgaaccg gcggcactaa cccaactgat
gaccgcatat ttggttttca 251 aaaacatgaa atcgggaaat atccaatctg
aagaaaactt aaaaataccc 301 gaatccgcat gggcttcaga aggaagcaga
atgtttgtac gtcccggcga 351 tacggtcagc accgacaaac tcttaaaagg
catgattgcc ctatgcgcaa 401 acgatgccgc cctaaccctt gccgaccggc
tgggcaacgg ctcgattgaa 451 aattttgtgc aacaaatgaa caaagaagcc
cgacgcttgg gcatgaagaa 501 caccgtattc aaaaacccga caggcttggg
tagagaagga caggtttcca 551 ccgccaaaga cctctccctg ctgtctgaag
cattgatgcg cgactttccg 601 gaatattacc cgctgttttc catcaaatcg
ttcaagtttg aaaacataga 651 acaaaacaac cgcaatatcc ttttatatag
ggacaacaat gtaaacggcc 701 tgaaagccgg gcacacagaa agcggcggct
acaaccttgc cgtgtcatac 751 tccggcaacg gcaggcacat ccttgtcatc
acactaggtt cggaatcggc 801 ggaaacccgc gcatcggaca acagcaagct
gctgaaccgg gcattgcagg 851 ccttcgatac gcccaaaata tatccgaaag
gcaaaaccgt tgcccaaatc 901 caaatttccg gaggcagcaa aaaaaccgtc
cgcgcaggct tcctcaaaga 951 agcctacatc actctgccac ataaagaagc
gaaaatggca gaacagattt 1001 tggaaaccat acagccgatt cccgccccgg
taaaaaaagg gcagatttta 1051 ggaaaaatca aaatcaggca aaacggacat
accattgccg aaaaagaaat 1101 cgtcgcactg gaaaacgtag aaaaaagaag
ccggtggcaa aggctttgga 1151 cgcgtctgac agggcagtaa
This corresponds to the amino acid sequence <SEQ ID 1626; ORF
554.ng>:
TABLE-US-01976 g554.pep.. 1 MTAHKILPVL LPIILGVSHA TAASPAPNRP
TVHAAPTLQT PETLTAAHIV 51 IDLQSRQTLS AKNTNTPVEP AALTQLMTAY
LVFKNMKSGN IQSEENLKIP 101 ESAWASEGSR MFVRPGDTVS TDKLLKGMIA
LCANDAALTL ADRLGNGSIE 151 NFVQQMNKEA RRLGMKNTVF KNPTGLGREG
QVSTAKDLSL LSEALMRDFP 201 EYYPLFSIKS FKFENIEQNN RNILLYRDNN
VNGLKAGHTE SGGYNLAVSY 251 SGNGRHILVI TLGSESAETR ASDNSKLLNR
ALQAFDTPKI YPKGKTVAQI 301 QISGGSKKTV RAGFLKEAYI TLPHKEAKMA
EQILETIQPI PAPVKKGQIL 351 GKIKIRQNGH TIAEKEIVAL ENVEKRSRWQ
RLWTRLTGQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1627>:
TABLE-US-01977 m554.seq.. 1 ATGACAGCAC ATAAAATCCT GCCCGTCCTG
CTTTCCATCA TCTTAGGCGT 51 TTCTCACGCA ACGGCTGCAT CGCCCGCGCC
CAACAGACCG ACGGTACACG 101 CCGCCCCCAC GTTCCAAACA CCCGAAACCC
TCACAGCGGC ACACATCGTT 151 ATCGACCTTC AAAGCAAACA GATTTTATCC
GCCAAAAACA TCAATACCCC 201 TGTTGAACCG GCGGCACTAA CCCAACTGAT
GACCGCATAT CTGGTTTTCA 251 AAAACATGAA ATCGGGCAAT ATCCAATCTG
AAGAAAACTT AAAAATACCC 301 GAATCCGCAT GGGCTTCAGA AGGAAGCAGA
ATGTTTGTAC GTCCCGGCGA 351 TACGGTCAGC ACCGACAAAC TCTTAAAAGG
CATGATTGCA CTATCCGCAA 401 ACGATGCCGC CCTAACCCTT GCCGGCCGGC
TGGGCAACGG CTCGATTGAA 451 AATTTTGTGC AACAAATGAA CAAAGAAGCC
CGACGCTTGG GCATGAAGAA 501 CACTGTATTC AAAAACCCGA CAGGCTTGAG
TAGAGAAGGA CAGGTTTCCA 551 CCGCCAAAGA CGTCGCACTG CTGTCTGAAG
CATTGATGCG CGACTTTCCG 601 GAATATTACC CGCTGTTTTC CATCAAATCT
TTCAAATTCA AAAATATAGA 651 ACAAAACAAC CGCAATATCC TTTTATATAG
GGACAACAAT GTAAACGGTC 701 TGAAAGCCGG ACACACAGAA AGCGGCGGCT
ACAACCTTGC CGTGTCATAC 751 TCCGGCAACG GCAGGCACAT CCTTGTCATC
ACATTGGGTT CGGAATCGGC 801 GGAAACACGC GCATCAGACA ACAGCAAGCT
GCTGAACTGG GCATTGCAGG 851 CCTTCGATAC GCCCAAAATA TATCCGAAAG
GCAAAACCGT TGCCCAAATC 901 CAAATTTCCG GAGGCAGCAA AAAAACCGTC
CGCGCAGGCT TCCTCAAAGA 951 AGCCTACATC ACTCTGCCAC ATAAGGAAGC
GAAAATGGCA GAACAAATTC 1001 TAGAAACCAT ACAGCCGATT CCCGCCCCAG
TAAAAAAAGG GCAAATTTTA 1051 GGAAAAATCA AAATCAGACA AAACGGATAC
ACCATTGCCG AAAAAGAAAT 1101 CGTCGCACTG GAAAATGTAA AAAAAAGAAG
CCGGTGGCAA AGGCTTTGGG 1151 CGTGTCTGAC AGGGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 1628; ORF
554>:
TABLE-US-01978 m554.pep.. 1 MTAHKILPVL LSIILGVSHA TAASPAPNRP
TVHAAPTFQT PETLTAAHIV 51 IDLQSKQILS AKNINTPVEP AALTQLMTAY
LVFKNMKSGN IQSEENLKIP 101 ESAWASEGSR MFVRPGDTVS TDKLLKGMIA
LSANDAALTL AGRLGNGSIE 151 NFVQQMNKEA RRLGMKNTVF KNPTGLSREG
QVSTAKDLAL LSEALMRDFP 201 EYYPLFSIKS FKFKNIEQNN RNILLYRDNN
VNGLKAGHTE SGGYNLAVSY 251 SGNGRHILVI TLGSESAETR ASDNSKLLNW
ALQAFDTPKI YPKGKTVAQI 301 QISGGSKKTV RAGFLKEAYI TLPHKEAKMA
EQILETIQPI PAPVKKGQIL 351 GKIKIRQNGY TIAEKEIVAL ENVKKRSRWQ
RLWACLTGQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 554
shows 96.1% identity over a 389 aa overlap with a predicted ORF
(ORF 554.ng) from N. gonorrhoeae:
TABLE-US-01979 m554/g554 10 20 30 40 50 60 m554.pep
MTAHKILPVLLSIILGVSHATAASPAPNRPTVHAAPTFQTPETLTAAHIVIDLQSKQILS
||||||||||| |||||||||||||||||||||||||:|||||||||||||||||:| || g554
MTAHKILPVLLPIILGVSHATAASPAPNRPTVHAAPTLQTPETLTAAHIVIDLQSRQTLS 10 20
30 40 50 60 70 80 90 100 110 120 m554.pep
AKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVS |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g554
AKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVS 70 80
90 100 110 120 130 140 150 160 170 180 m554.pep
TDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREG
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||:||| g554
TDKLLKGMIALCANDAALTLADRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLGREG 130
140 150 160 170 180 190 200 210 220 230 240 m554.pep
QVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTE
||||||||:||||||||||||||||||||||||:|||||||||||||||||||||||||| g554
QVSTAKDLSLLSEALMRDFPEYYPLFSIKSFKFENIEQNNRNILLYRDNNVNGLKAGHTE 190
200 210 220 230 240 250 260 270 280 290 300 m554.pep
SGGYNLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQI
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| g554
SGGYNLAVSYSGNGRHILVITLGSESAETRASDNSKLLNRALQAFDTPKIYPKGKTVAQI 250
260 270 280 290 300 310 320 330 340 350 360 m554.pep
QISGGSKKTVRAGFLKEAYITLPHKEAKMAEQILETIQPIPAPVKKGQILGKIKIRQNGY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g554
QISGGSKKTVRAGFLKEAYITLPHKEAKMAEQILETIQPIPAPVKKGQILGKIKIRQNGH 310
320 330 340 350 360 370 380 390 m554.pep
TIAEKEIVALENVKKRSRWQRLWACLTGQX |||||||||||||:|||||||||: ||||| g554
TIAEKEIVALENVEKRSRWQRLWTRLTGQX 370 380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1629>:
TABLE-US-01980 a554.seq 1 ATGACAGCAC ATAAAATCCT GCCCGTCCTG
CTTTCCATCA TCTTAGGCGT 51 TTCTCACGCA ACGGCTGCAT CGCCCGCGCC
CAACAGACCG ACGGCACACG 101 CCGCCCCCAC GTTCCAAACA CCCGAAACCC
TCACAGCGGC ACACATCGTT 151 ATCGACCTTC AAAGCAAACA GATTTTATCC
GCCAAAAACA TCAATACCCC 201 TGTCGAACCG GCGGCACTAA CCCAACTGAT
GACCGCATAT CTGGTTTTCA 251 AAAACATGAA ATCGGGAAAT ATCCGATCTG
AAGAAAACTT AAAAATACCC 301 GAATCCGCAT GGGCTTCAGA AGGAAGCAGA
ATGTTTGTAC GTCCCGGCGA 351 TACGGTCAGC ACCGACAAAC TCTTAAAAGG
CATGATTGCA CTATCCGCAA 401 ACGATGCCGC CCTAACCCTT GCCGGCCGGC
TGGGCAACGG CTCGATTGAA 451 AATTTTGTGC AACAAATGAA CAAAGAAGCC
CGACGCTTGG GCATGAAGAA 501 CACTGTATTC AAAAATCCGA CAGGCTTGAG
TAGAGAAGGA CAGGTTTCCA 551 CCGCCAAAGA CCTCGCCCAG CTGTCTGAAG
CATTGATGCG CGACTTTCCG 601 GAATATTACC CGCTGTTTTC CATCAAATCT
TTCAAATTCA AAAATATAGA 651 GCAAAACAAC CGCAATATCC TTTTATATAG
GGACAACAAT GTAAACGGTC 701 TGAAAGCCGG ACACACAGAA AGCGGCGGCT
ACAACCTTGC CGTGTCATAC 751 TCCGGCAACG GCAGGCACAT CCTTGTCATC
ACATTGGGTT CGGAATCGGC 801 GGAAACACGC GCATCAGACA ACAGCAAGCT
GCTGAACTGG GCATTGCAAG 851 CCTTCGATAC GCCCAAAATA TATCCGAAAG
GCAAAACCGT TGCCCAAATC 901 CAAATTTCCG GAGGCAGCAA AAAAACCGTC
CGCGCAGGCT TCCTCAAAGA 951 AGCCTACATC ACTCTGCCAC ATAAGGAAGC
GAAAATGGCA GAACAAATTC 1001 TAGAAACCAT ACAGCCGATT CCCGCCCCAG
TAAAAAAAGG GCAAATTTTA 1051 GGAAAAATCA AAATCAGACA AAACGGATAC
ACCATTGCCG AAAAAGAAAT 1101 CGTCGCACTG GAAAATGTAA AAAAAAGAAG
CCGGTGGCAA AGGCTTTGGG 1151 CGTGTCTGAC AGGGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 1630; ORF
554.a>:
TABLE-US-01981 a554.pep 1 MTAHKILPVL LSIILGVSHA TAASPAPNRP
TAHAAPTFQT PETLTAAHIV 51 IDLQSKQILS AKNINTPVEP AALTQLMTAY
LVFKNMKSGN IRSEENLKIP 101 ESAWASEGSR MFVRPGDTVS TDKLLKGMIA
LSANDAALTL AGRLGNGSIE 151 NFVQQMNKEA RRLGMKNTVF KNPTGLSREG
QVSTAKDLAQ LSEALMRDFP 201 EYYPLFSIKS FKFKNIEQNN RNILLYRDNN
VNGLKAGHTE SGGYNLAVSY 251 SGNGRHILVI TLGSESAETR ASDNSKLLNW
ALQAFDTPKI YPKGKTVAQI 301 QISGGSKKTV RAGFLKEAYI TLPHKEAKMA
EQILETIQPI PAPVKKGQIL 351 GKIKIRQNGY TIAEKEIVAL ENVKKRSRWQ
RLWACLTGQ* m554/a554 99.2% identity in 389 aa overlap 10 20 30 40
50 60 m554.pep
MTAHKILPVLLSIILGVSHATAASPAPNRPTVHAAPTFQTPETLTAAHIVIDLQSKQILS
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| a554
MTAHKILPVLLSIILGVSHATAASPAPNRPTAHAAPTFQTPETLTAAHIVIDLQSKQILS 10 20
30 40 50 60 70 80 90 100 110 120 m554.pep
AKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVS
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| a554
AKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVS 70 80
90 100 110 120 130 140 150 160 170 180 m554.pep
TDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a554
TDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREG 130
140 150 160 170 180 190 200 210 220 230 240 m554.pep
QVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTE
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| a554
QVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTE 190
200 210 220 230 240 250 260 270 280 290 300 m554.pep
SGGYNLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a554
SGGYNLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQI 250
260 270 280 290 300 310 320 330 340 350 360 m554.pep
QISGGSKKTVRAGFLKEAYITLPHKEAKMAEQILETIQPIPAPVKKGQILGKIKIRQNGY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a554
QISGGSKKTVRAGFLKEAYITLPHKEAKMAEQILETIQPIPAPVKKGQILGKIKIRQNGY 310
320 330 340 350 360 370 380 390 m554.pep
TIAEKEIVALENVKKRSRWQRLWACLTGQX |||||||||||||||||||||||||||||| a554
TIAEKEIVALENVKKRSRWQRLWACLTGQX 370 380 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1631>:
TABLE-US-01982 g556.seq.. 1 atggacaata agaccaaact gcgcttgggc
ggcctgattt tactgaccac 51 cgccgtttta agcctcatta tcgtattgat
tgtcgattcc tggccgcttg 101 ccatcctgct tgccgccgtc atcgtcgccg
ccgctgcggg cggctttgtt 151 tggacatccc gccgacagca acgccagttt
atcgaacgtc tgaaaaaatt 201 cgacatcgat cccgaaaaag gcagaatcaa
cgaggcaaac ctgcgccgta 251 tgtaccacag cggcggacaa caccagaaag
atgcgattac cctgatctgc 301 ctgtcgcaaa aatgttcggt ggacgaggcg
cacgctatgt tcaaaaaacg 351 cccgacacgt caggaaatca atcaaatggc
ggcaaaacag tcgcgcggtc 401 agaaacgtcc gcaccgttaa
This corresponds to the amino acid sequence <SEQ ID 1632; ORF
556.ng>:
TABLE-US-01983 g556.pep. 1 MDNKTKLRLG GLILLTTAVL SLIIVLIVDS
WPLAILLAAV IVAAAAGGFV 51 WTSRRQQRQF IERLKKFDID PEKGRINEAN
LRRMYHSGGQ HQKDAITLIC 101 LSQKCSVDEA HAMFKKRPTR QEINQMAAKQ
SRGQKRPHR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1633>:
TABLE-US-01984 m556.seq.. 1 ATGGACAATA AGACCAAACT GCGCTTGGGC
GGCCTGATTT TACTGACCAC 51 CGCCGTTTTA AGCCTCATTA TCGTATTGAT
TGTCGATTCC TGGCCGCTTG 101 CCATCCTGCT TGCAGCCGTC ATTGTCGCTG
CCGCTGCGGG CGGTTTTGTT 151 TGGACATCCC GCCGACAGCA ACGCCAGTTT
ATCGAACGCC TGAAAAAATT 201 CGACATCGAT CCCGAAAAAG GCAGAATCAA
CGAGGCAAAC CTGCGCCGTA 251 TGTACCACAG CGGCGGACAA CACCAGAAAG
ATGCGATTAC CCTGATCTGC 301 CTGTCGCAAA AATGTTCGGT GGACGAGGCG
CACGCTATGT TCAAAAAACG 351 CCCGACACGT CAGGAAATCA ATCAAATGGC
GGCAAAACAG TCGCGCGGTC 401 AGAAACGTCC GCACCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1634; ORF
556>:
TABLE-US-01985 m556.pep.. 1 MDNKTKLRLG GLILLTTAVL SLIIVLIVDS
WPLAILLAAV IVAAAAGGFV 51 WTSRRQQRQF IERLKKFDID PEKGRINEAN
LRRMYHSGGQ HQKDAITLIC 101 LSQKCSVDEA HAMFKKRPTR QEINQMAAKQ
SRGQKRPHR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 556
shows 100.0% identity over a 139 aa overlap with a predicted ORF
(ORF 556.ng) from N. gonorrhoeae:
TABLE-US-01986 m556/g556 10 20 30 40 50 60 m556.pep
MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAAAAGGFVWTSRRQQRQF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g556
MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAAAAGGFVWTSRRQQRQF 10 20
30 40 50 60 70 80 90 100 110 120 m556.pep
IERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLSQKCSVDEAHAMFKKRPTR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g556
IERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLSQKCSVDEAHAMFKKRPTR 70 80
90 100 110 120 130 140 m556.pep QEINQMAAKQSRGQKRPHRX
|||||||||||||||||||| g556 QEINQMAAKQSRGQKRPHRX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1635>:
TABLE-US-01987 a556.seq 1 ATGGACAATA AGACCAAACT GCGCTTGGGC
GGCCTGATTT TACTGACCAC 51 CGCCGTTTTA AGCCTCATTA TCGTATTGAT
TGTCGATTCC TGGCCGCTTG 101 CCATCCTGCT TGCCGCCGTC ATCGTCGCCG
CCGCTGCGGG CGGCTTTGTT 151 TGGACATCCC GCCGACAGCA ACGCCAGTTT
ATCGAACGTC TGAAAAAATT 201 CGACATCGAT CCCGAAAAAG GCAGAATCAA
CGAGGCAAAC CTGCGCCGTA 251 TGTACCACAG CGGCGGACAA CACCAAAAAG
ATGCGATTAC CCTGATCTGC 301 CTGTCGCAAA AATGTTCGGT GGACGAGGCG
CACGCTATGT TCAAAAAACG 351 CCCGACACGT CAGGAAATCA ATCAAATGGC
GGCAAAACAG TCGCGCGGTC 401 AGAAACGTCC GCACCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1636; ORF
556.a>:
TABLE-US-01988 a556.pep 1 MDNKTKLRLG GLILLTTAVL SLIIVLIVDS
WPLAILLAAV IVAAAAGGFV 51 WTSRRQQRQF IERLKKFDID PEKGRINEAN
LRRMYHSGGQ HQKDAITLIC 101 LSQKCSVDEA HAMFKKRPTR QEINQMAAKQ
SRGQKRPHR* m556/a556 100.0% identity in 139 aa overlap 10 20 30 40
50 60 m556.pep
MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAAAAGGFVWTSRRQQRQF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a556
MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAAAAGGFVWTSRRQQRQF 10 20
30 40 50 60 70 80 90 100 110 120 m556.pep
IERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLSQKCSVDEAHAMFKKRPTR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a556
IERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLSQKCSVDEAHAMFKKRPTR 70 80
90 100 110 120 130 140 m556.pep QEINQMAAKQSRGQKRPHRX
|||||||||||||||||||| a556 QEINQMAAKQSRGQKRPHRX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1637>:
TABLE-US-01989 g557.seq 1 atgaacaaaa tattccttac tgccgcagcc
ttggtgctgg gcgcgtgcgg 51 tttccacctg aaaggtgcag acggcatttc
tccgccgctg acctaccgga 101 gctggcacat cgaaggcgga caggcattgc
aatttccttt ggaaaccgcg 151 ctgtatcagg cttcgggcag ggtggacgat
gctgccggcg cgcagatgac 201 cctgcgtata gacagcgttt cccaaaacaa
ggaaacctat accgttaccc 251 gtgcggcagt catcaacgaa tatcttttga
tattgacggt tgaagcgcag 301 gtattgaaac gcggcgagcc ggtcggcaaa
ccgatgaccg tgtccgtccg 351 ccgcattttg gattatgccg acaacgaaat
tttgggcaaa caggaagaag 401 aagaaaccct gtgggcggaa atgcggcagg
atgttgccga acagattgtc 451 cgccgcctga cctttctgaa ggcggaatga
This corresponds to the amino acid sequence <SEQ ID 1638; ORF
557.ng>:
TABLE-US-01990 g557.pep.. 1 MNKIFLTAAA LVLGACGFHL KGADGISPPL
TYRSWHIEGG QALQFPLETA 51 LYQASGRVDD AAGAQMTLRI DSVSQNKETY
TVTRAAVINE YLLILTVEAQ 101 VLKRGEPVGK PMTVSVRRIL DYADNEILGK
QEEEETLWAE MRQDVAEQIV 151 RRLTFLKAE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1639>:
TABLE-US-01991 m557.seq.. 1 ATGAACAAAC TGTTTCTTAC TGCCGCAGTG
CTGATGCTGG GCGCGTGCGG 51 TTTCCACCTG AAAGGTGCAG ACGGCATTTC
TCCGCCGCTG ACCTACCGGA 101 GCTGGCACAT CGAAGGCGGA CAGGCATTGC
GGTTTCCTTT GGAAACCGCG 151 CTGTATCAGG CTTCGGGCAG GGTGGACGAT
GCTGCCGGCG CGCAGATGAC 201 CCTGCGTATA GACAGCGTTT CCCAAAACAA
GGAAACCTAC ACCGTTACCC 251 GTGCGGCAGT CATCAACGAA TATCTTTTGA
TATTGACGGT TGAAGCGCAG 301 GTATTGAAAC GCGGCGAGCC GGTCGGTAAA
CCGATGACCG TGTCCGTCCG 351 CCGCGTCCTT GCTTATGCCG ACAACGAGAT
CTTGGGCAAA CAGGAAGAGG 401 AAGCGGCATT GTGGGCGGAA ATGCGGCAGG
ATGCCGCCGA ACAGATTGTC 451 CGCCGCCTGA CCTTTCTGAA GGCGGAATGA
This corresponds to the amino acid sequence <SEQ ID 1640; ORF
557>:
TABLE-US-01992 m557.pep.. 1 MNKLFLTAAV LMLGACGFHL KGADGISPPL
TYRSWHIEGG QALRFPLETA 51 LYQASGRVDD AAGAQMTLRI DSVSQNKETY
TVTRAAVINE YLLILTVEAQ 101 VLKRGEPVGK PMTVSVRRVL AYADNEILGK
QEEEAALWAE MRQDAAEQIV 151 RRLTFLKAE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 557
shows 94.3% identity over a 159 aa overlap with a predicted ORF
(ORF 557.ng) from N. gonorrhoeae:
TABLE-US-01993 m557/g557 10 20 30 40 50 60 m557.pep
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDD
|||:|||||:|:|||||||||||||||||||||||||||||||:|||||||||||||||| g557
MNKIFLTAAALVLGACGFHLKGADGISPPLTYRSWHIEGGQALQFPLETALYQASGRVDD 10 20
30 40 50 60 70 80 90 100 110 120 m557.pep
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| g557
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRIL 70 80
90 100 110 120 130 140 150 160 m557.pep
AYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAEX |||||||||||||
:||||||||:||||||||||||||| g557
DYADNEILGKQEEEETLWAEMRQDVAEQIVRRLTFLKAEX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1641>:
TABLE-US-01994 a557.seq 1 ATGAACAAAC TGTTTCTTAC TGCCGCAGTG
CTGATGCTGG GCGCGTGCGG 51 TTTCCACCTG AAAGGTGCAG ACGGCATTTC
TCCGCCGCTG ACCTACCGGA 101 GCTGGCACAT CGAAGGCGGA CAGGCATTGC
AGTTTCCTTT GGAAACCGCG 151 CTGTATCAGG CTTCGGGTAG GGTGGACGAT
GCTGCCGGCG CGCAGATGAC 201 CCTGCGTATA GACAGCGTTT CCCAAAACAA
GGAAACCTAC ACCGTTACCC 251 GTGCGGCAGT CATCAACGAA TATCTTTTGA
TATTGACGGT TGAAGCGCAG 301 GTATTGAAAC GCGGCGAGCC GGTCGGCAAA
CCGATGACCG TGTCCGTCCG 351 CCGCGTCCTT GCTTATGCCG ACAACGAGAT
CTTGGGCAAA CAGGAAGAGG 401 AAGCGGCATT GTGGGCGGAA ATGCGGCAGG
ATGCCGCCGA ACAGATTGTC 451 CGCCGCCTGA CCTTTCTGAA GGCGGAATGA
This corresponds to the amino acid sequence <SEQ ID 1642; ORF
557.a>:
TABLE-US-01995 a557.pep 1 MNKLFLTAAV LMLGACGFHL KGADGISPPL
TYRSWHIEGG QALQFPLETA 51 LYQASGRVDD AAGAQMTLRI DSVSQNKETY
TVTRAAVINE YLLILTVEAQ 101 VLKRGEPVGK PMTVSVRRVL AYADNEILGK
QEEEAALWAE MRQDAAEQIV 151 RRLTFLKAE* m557/a557 99.4% identity in
159 aa overlap 10 20 30 40 50 60 m557.pep
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALRFPLETALYQASGRVDD
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| a557
MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQFPLETALYQASGRVDD 10 20
30 40 50 60 70 80 90 100 110 120 m557.pep
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a557
AAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVLKRGEPVGKPMTVSVRRVL 70 80
90 100 110 120 130 140 150 160 m557.pep
AYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAEX
|||||||||||||||||||||||||||||||||||||||| a557
AYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAEX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1643>:
TABLE-US-01996 g558.seq.. 1 ATGGATGCTT GTTTTTTCGT CATTCCCGCA
CAGGCGGGAA TTCGGAGATT 51 CGGGATTGTT TTCAAACGTT CGGGTCGGAT
TCTTGCCGGT GCGGGAATGA 101 TGCCCTTATA TACTTTCTCC GAGCTTTATA
TGCTTCAACA GGGGACGGCA 151 CATCAAGCAC CGCACTGCGT GTTGCCCGAA
CGAGGCTGCC CTCCGATTAG 201 ATTCTATCGC TATAAACAGA CGGGTTTCAA
CCGAAAAGGA ATGGGGATAA 251 AGTCCATTTC CGACACCTCT CGGGCGATGC
CGTCTGAAAA CCAATCTCCA 301 CTTTCAGACG GCATTGTTTA G
This corresponds to the amino acid sequence <SEQ ID 1644; ORF
558.ng>:
TABLE-US-01997 g558.pep.. 1 MDACFFVIPA QAGIRRFGIV FKRSGRILAG
AGMMPLYTFS ELYMLQQGTA 51 HQAPHCVLPE RGCPPIRFYR YKQTGFNRKG
MGIKSISDTS RAMPSENQSP 101 LSDGIV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1645>:
TABLE-US-01998 m558.seq.. 1 ATGAATGCTT GTTTTTTCGT CATTCCCACA
CAGGCGGGAA TTCGGAGATT 51 CGGGATTGTT TTCAAACGTT CGGGTCGGAT
TCTTGCCGGT GCAGGAATGA 101 TGCCCTTATA TACTTTCTCC GAGCTTTATA
TGTTTCAACA GGGGACGGCA 151 CATCAAGCAC CGCACTGCGT GTTGCCCGAA
CGAGACTACC CTCCGATTAG 201 ATTCTATCGC CATAAACAGA CGGGTTTCAA
CCGAAAAGGA ATGGGGATAA 251 AGTCCATTTC CGACATCTsT CGGGCGATGC
CGTCTGAAAA CCAATCTCCA 301 CTTTCAGACG GCATTGTTTA G
This corresponds to the amino acid sequence <SEQ ID 1646; ORF
558>:
TABLE-US-01999 m558.pep.. 1 MNACFFVIPT QAGIRRFGIV FKRSGRILAG
AGMMPLYTFS ELYMFQQGTA 51 HQAPHCVLPE RDYPPIRFYR HKQTGFNRKG
MGIKSISDIX RAMPSENQSP 101 LSDGIV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 558
shows 92.5% identity over a 106 aa overlap with a predicted ORF
(ORF 558.ng) from N. gonorrhoeae:
TABLE-US-02000 m558/g558 10 20 30 40 50 60 m558.pep
MNACFFVIPTQAGIRRFGIVFKRSGRILAGAGMMPLYTFSELYMFQQGTAHQAPHCVLPE
|:|||||||:||||||||||||||||||||||||||||||||||:||||||||||||||| g558
MDACFFVIPAQAGIRRFGIVFKRSGRILAGAGMMPLYTFSELYMLQQGTAHQAPHCVLPE 10 20
30 40 50 60 70 80 90 100 m558.pep
RDYPPIRFYRHKQTGFNRKGMGIKSISDIXRAMPSENQSPLSDGIVX |
|||||||:||||||||||||||||| ||||||||||||||||| g558
RGCPPIRFYRYKQTGFNRKGMGIKSISDTSRAMPSENQSPLSDGIVX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1647>:
TABLE-US-02001 a558.seq 1 ATGAATGCTT GTTTTTTCGT CATTCCCACA
CAGGCGGGAA TTCGGAGATT 51 CGGGATTGTT TTCAAACGTT CGGGTCGGAT
TCTTGCCGGT GCGGGAATGA 101 TGCCCTTATA TATAGTGGAT TAAATTTAAA
TCAGGACAAG GCGACGAAGC 151 CGCAGACAGT ACAAATAGTA CGGCAAGGCG
AGGCAACGCC GTACTGGTTT 201 AAATTTAATC CACTATACTT TCTCCGAGCT
TTATATGTTT CAACAGAGGA 251 CGGCACATCA AGCACCGCAC TGCGTGTTGC
CCGAACGAGA CTGCCCTCCG 301 ATTAGATTCT ATCGCTATAA ACAGACGGGT
TTCAACCGAA AAGGAATGGG 351 AATGAAGTCC GTTTCCGACA CCTCTCGGGC
GATGCCGTCT GAAAACCAAT 401 CTCCACTTTC AGACGGCATT GTTTAG
This corresponds to the amino acid sequence <SEQ ID 1648; ORF
558.a>:
TABLE-US-02002 a558.pep 1 MNACFFVIPT QAGIRRFGIV FKRSGRILAG
AGMMPLYIVD *I*IRTRRRS 51 RRQYK*YGKA RQRRTGLNLI HYTFSELYMF
QQRTAHQAPH CVLPERDCPP 101 IRFYRYKQTG FNRKGMGMKS VSDTSRAMPS
ENQSPLSDGI V* m558/a558 70.2% identity in 141 aa overlap 10 20 30
m558.pep
MNACFFVIPTQAGIRRFGIVFKRSGRILAGAGMMPLY-----------------------
||||||||||||||||||||||||||||||||||||| a558
MNACFFVIPTQAGIRRFGIVFKRSGRILAGAGMMPLYIVDXIXIRTRRRSRRQYKXYGKA 10 20
30 40 50 60 40 50 60 70 80 m558.pep
------------TFSELYMFQQGTAHQAPHCVLPERDYPPIRFYRHKQTGFNRKGMGIKS
|||||||||| |||||||||||||| |||||||:|||||||||||:|| a558
RQRRTGLNLIHYTFSELYMFQQRTAHQAPHCVLPERDCPPIRFYRYKQTGFNRKGMGMKS 70 80
90 100 110 120 90 100 m558.pep ISDIXRAMPSENQSPLSDGIVX :||
||||||||||||||||| a558 VSDTSRAMPSENQSPLSDGIVX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1649>:
TABLE-US-02003 g560.seq 1 atgctcatca tccgcaacct gatttactgg
ctgatactct gttccagcct 51 gattttcctc tttcccttta tgctgctcgc
ctcgcctttc cgggacgggg 101 cgcacaagat ggcgcgggtc tgggtcggca
tcctcaactg gtcgctcaaa 151 cacatcgtcg ggctcaaata ccgcatcatc
ggcgcggaac acattccgga 201 ccgcccctcc gtcatctgcg ccaaacacca
aagcggctgg gaaacgctcg 251 cgctccaaga gatttttccg ccgcaggttt
acgttgccaa gcgcgagttg 301 ttcaaaatcc cctttttcgg ctggggcttg
aaactggtca aaaccatagg 351 catagaccgc aacaaccgcc gcgaagccaa
cgaacagctc ataaaacagg 401 gtttggcgcg caaaaacgaa ggttattgga
ttaccatttt ccccgaaggc 451 acgcgccttg cgcccggaaa acgcggcaaa
tacaaactcg gcggcgcgcg 501 catggcgaaa atgtttgaga tggacatcgt
ccccgtcgcc ctcaacagcg 551 gcgaattttg gccgaaaaat tcctttctga
aatatccggg ggaaatcacc 601 gtcatcatct gtccgaccat cccgcacgca
agcggcagcg aagccgaatt 651 gatggaaaaa tgcgaacacc tcattgaaac
gcaacaaccg cttatttccg 701 gcgcaggccc gtttgccgcc gaaatgccgt
ctgaaaccgc atga
This corresponds to the amino acid sequence <SEQ ID 1650; ORF
560.ng>:
TABLE-US-02004 g560.pep.. 1 MLIIRNLIYW LILCSSLIFL FPFMLLASPF
RDGAHKMARV WVGILNWSLK 51 HIVGLKYRII GAEHIPDRPS VICAKHQSGW
ETLALQEIFP PQVYVAKREL 101 FKIPFFGWGL KLVKTIGIDR NNRREANEQL
IKQGLARKNE GYWITIFPEG 151 TRLAPGKRGK YKLGGARMAK MFEMDIVPVA
LNSGEFWPKN SFLKYPGEIT 201 VIICPTIPHA SGSEAELMEK CEHLIETQQP
LISGAGPFAA EMPSET*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1651>:
TABLE-US-02005 m560.seq 1 ATGCTCATCA TCCGCAACCT GATTTACTGG
CTGATACTCT GTTCCACCCT 51 GATTTTCCTC TTTCCCTTTA TGCTGCTCGC
CTCGCCTTTC CGGGACGGGG 101 CGCACAAGAT GGCGCGGGTC TGGGTCGGCA
TTCTCAACTG GTCGCTCAAA 151 CACATCGTCG GGCTCAAATA CCGCATCATC
GGCGCGGAAA ACATCCCCGA 201 CCGCCCCGCC GTCATCTGCG CCAAACACCA
AAGCGGCTGG GAAACGCTCG 251 CCCTTCAGGA CATTTTTCCG CCGCAGGTTT
ACGTTGCCAA ACGCGAGTTG 301 TTCAAAATCC CCTTTTTCGG CTGGGGCTTG
AAACTGGTCA AAACCATAGG 351 CATAGACCGC AACAACCGCC GCGAAGCCAA
CGAGCAGCTC ATAAAACAGG 401 GGTTGGTGCG CAAAAACGAA GGCTATTGGA
TTACCATTTT CCCCGAAGGC 451 ACGCGCCTTG CGCCCGGAAA ACGCGGCAAA
TACAAACTCG GCGGCGCGCG 501 CATGGCGAAA ATGTTTGAGA TGGACATCGT
CCCCGTCGCC CTCAACAGCG 551 GCGAATTTTG GCCGAAAAAC TCCTTTCTGA
AATATCCGGG GGAAATCACC 601 GTCGTCATCT GTCCGACCAT CCCGCACGCA
AGCGGCAGCG AAGCCGAATT 651 GATGGAAAAA TGCGAACATC TCATCGAAAC
GCAACAACCG CTTATTTCCG 701 GCGCAGGCCC GTTTGCCGCC AAAATGCCGT
CTGAAACCGC ATGA
This corresponds to the amino acid sequence <SEQ ID 1652; ORF
560>:
TABLE-US-02006 m560.pep 1 MLIIRNLIYW LILCSTLIFL FPFMLLASPF
RDGAHKMARV WVGILNWSLK 51 HIVGLKYRII GAENIPDRPA VICAKHQSGW
ETLALQDIFP PQVYVAKREL 101 FKIPFFGWGL KLVKTIGIDR NNRREANEQL
IKQGLVRKNE GYWITIFPEG 151 TRLAPGKRGK YKLGGARMAK MFEMDIVPVA
LNSGEFWPKN SFLKYPGEIT 201 VVICPTIPHA SGSEAELMEK CEHLIETQQP
LISGAGPFAA KMPSETA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 560
shows 97.2% identity over a 246 aa overlap with a predicted ORF
(ORF 560.ng) from N. gonorrhoeae:
TABLE-US-02007 m560/g560 10 20 30 40 50 60 m560.pep
MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVGILNWSLKHIVGLKYRII
||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| g560
MLIIRNLIYWLILCSSLIFLFPFMLLASPFRDGAHKMARVWVGILNWSLKHIVGLKYRII 10 20
30 40 50 60 70 80 90 100 110 120 m560.pep
GAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR
|||:|||||:||||||||||||||||:||||||||||||||||||||||||||||||||| g560
GAEHIPDRPSVICAKHQSGWETLALQEIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR 70 80
90 100 110 120 130 140 150 160 170 180 m560.pep
NNRREANEQLIKQGLVRKNEGYWITIFPEGTRLAPGKRGKYKLGGARMAKMFEMDIVPVA
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| g560
NNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGKYKLGGARMAKMFEMDIVPVA 130
140 150 160 170 180 190 200 210 220 230 240 m560.pep
LNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELMEKCEHLIETQQPLISGAGPFAA
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g560
LNSGEFWPKNSFLKYPGEITVIICPTIPHASGSEAELMEKCEHLIETQQPLISGAGPFAA 190
200 210 220 230 240 m560.pep KMPSETAX :||||| g560 EMPSETX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1653>:
TABLE-US-02008 a560.seq 1 ATGCTCATCA TCCGCAACCT GATTTACTGG
CTGATACTCT GTTCCACCCT 51 GATTTTCCTC TTTCCCTTTA TGCTGCTCGC
CTCGCCTTTC CGAGACGGGG 101 CGCACAAGAT GGCGCGGGTC TGGGTCAAAA
TCCTCAACCT CTCGCTCAAA 151 CACATCGTCG GGCTCAAATA CCGCATCATC
GGCGCGGAAA ACATCCCCGA 201 CCGCCCCGCC GTCATCTGCG CCAAACACCA
AAGCGGCTGG GAAACGCTCG 251 CCCTTCAGGA CATTTTTCCG CCGCAGGTTT
ACGTTGCCAA ACGCGAGTTG 301 TTCAAAATCC CCTTTTTCGG CTGGGGCTTG
AAACTGGTCA AAACCATAGG 351 CATAGACCGC AACAACCGCC GCGAAGCCAA
CGAGCAGCTC ATAAAACAGG 401 GGTTGGCGCG CAAAAACGAA GGCTATTGGA
TTACCATTTT CCCCGAAGGC 451 ACACGCCTTG CGCCCGGAAA ACGCGGCAAA
TACAAACTCG GCGGCGCGCG 501 CATGGCGAAA ATGTTTGAGA TGGACATCGT
CCCCGTCGCC CTCAACAGCG 551 GCGAATTTTG GCCGAAAAAC TCCTTTCTGA
AATATCCGGG GGAAATCACC 601 GTCGTCATCT GTCCGACCAT CCCGCACGCA
AGCGGCAGCG AAGCCGAATT 651 GATGGGAAAA TGCGAACACC TCATCGAAAC
GCAGCAGCCG CTCATTTCCG 701 GCGCAGGCCC GTTTGCCGCC AAAATGCCGT
CTGAAACCGC ATGA
This corresponds to the amino acid sequence <SEQ ID 1654; ORF
560.a>:
TABLE-US-02009 a560.pep 1 MLIIRNLIYW LILCSTLIFL FPFMLLASPF
RDGAHKMARV WVKILNLSLK 51 HIVGLKYRII GAENIPDRPA VICAKHQSGW
ETLALQDIFP PQVYVAKREL 101 FKIPFFGWGL KLVKTIGIDR NNRREANEQL
IKQGLARKNE GYWITIFPEG 151 TRLAPGKRGK YKLGGARMAK MFEMDIVPVA
LNSGEFWPKN SFLKYPGEIT 201 VVICPTIPHA SGSEAELMGK CEHLIETQQP
LISGAGPFAA KMPSETA* m560/a560 98.4% identity in 247 aa overlap 10
20 30 40 50 60 m560.pep
MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVGILNWSLKHIVGLKYRII
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| a560
MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKILNLSLKHIVGLKYRII 10 20
30 40 50 60 70 80 90 100 110 120 m560.pep
GAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a560
GAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR 70 80
90 100 110 120 130 140 150 160 170 180 m560.pep
NNRREANEQLIKQGLVRKNEGYWITIFPEGTRLAPGKRGKYKLGGARMAKMFEMDIVPVA
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a560
NNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGKYKLGGARMAKMFEMDIVPVA 130
140 150 160 170 180 190 200 210 220 230 240 m560.pep
LNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELMEKCEHLIETQQPLISGAGPFAA
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| a560
LNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELMGKCEHLIETQQPLISGAGPFAA 190
200 210 220 230 240 m560.pep KMPSETAX |||||||| a560 KMPSETAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1655>:
TABLE-US-02010 m561.seq. 1 ATGATACTGC CAGCCCGTTT TTCAGACGGC
ATCAGCCTTT CCCTGCGCCT 51 GAAACTCCTG ACCGGACTGT GGGTCGGGTT
GGCGGCATTG TCTGTCGTTT 101 TGACACTGCT GCTCTCTTTG CGTCTGGAAA
ACGCGGCCTC CGTCATCGAA 151 GAGGCGGGCA ACTTGAGAAT GCAGGCATAC
CGTCTGGCAT ACATGGCGGG 201 TGAAGGCTCG CCCCGTGCGC AAATTGACAA
TCAGGTTGCC GAATTTGAAA 251 AAAGTTTAAA ACGCATTGCC CAAAGCGATG
CCATCCATCC GCTGATTCCT 301 TCGGACACCC CTCTTGCTTA TGATTTGATA
CAATCCATGC TGATTATAGA 351 TTGGCAGGCA CACATCCTCC CCCCGCTCCA
GTCCTACCGG CGACCGACTC 401 AGGTCGATCT CTACCGCTTT GCCGGAAACA
TCGAACTGTT TTTGCAGGCA 451 TTGGAAAATG CCAACGAAAA AAACACATGG
TGGCTCAGGC GTTTTCAATG 501 GGCAATTATG TTGATGACGC TGGTGTCGTC
TGTACTGATG CTGTTTTGGC 551 ACCAGATTTG GGTTATCCGG CCGCTGCAGG
CGTTAAGGGA AGGTGCGGAA 601 CGCATCGGAC GGAGGTGTTT CGATATTCCG
GTTCCCGAAG GCGGTACGCC 651 GGAATTCAAA CAGGTCGGGC GTTGTTTCAA
TCAAATGGGC GGCAGGTTGA 701 AAATTTTATA TGATGATTTG GAAGGACAAG
TCGCCGAGCA GACACGCAGT 751 CTCGAAAAAC AAAATCAAAA CCTGACCCTG
CTGTACCAAA CTACACGGGA 801 CCTGCACCAA TCCTACATAC CGCAACAGGC
TGCAGAACAT TTTCTAAACC 851 GTATCCTGCC CGCCGTAGGA GCAGATTCCG
GCAGAGTTTG TTTGGACGGC 901 GGATCCGATG TTTATGTTTC CATTCATCAT
GCGGATTGCG GCACAGCAGC 951 TTCGGATTTG GGGAAGTACC ATGAGGAAAT
CTTCCCCATT GAGTACCAGA 1001 ACGAAACATT GGGCAGGCTG TTGCTCAGCT
TTCCAAACGG CATTTCTCTT 1051 GATGAAGACG ACCGCATCCT GCTTCAAACA
CTAGGCAGGC AATTGGGCGT 1101 ATCGCTTGCC GGCGCAAAAC AGGAGGAAGA
AAAACGCCTG CTTGCAGTAT 1151 TGCAGGAACG CAACCTGATT GCGCAAGGAT
TACATGACAG CATCGCACAA 1201 GCATTAACGT TCCTAAACCT ACAGGTACAG
ATGCTGGAAA CCGCCTTTGC 1251 CGAAAACAAA CGGGAGGAAG CCGCAGAAAA
CATCAGCTTT ATCAAAACAG 1301 GCGTGCAGGA ATGTTATGAA GATGTCCGCG
AACTGCTGCT CAACTTCCGT 1351 ACCAAAATCA GCAATAAAGA ATTTCCCGAA
GCCGTTGCCG ACCTATTCGC 1401 CCGCTTTACG CAACAAACCG GGATAACGGT
CGAAACCGCC TGGGAAAACG 1451 GTTCGTTCCT GCCGCCTCAG GAAGCGCAGC
TCCAAATGAT TTTTATCCTG 1501 CAGGAAAGCC TGTCCAACAT CCGCAAACAC
GCCCGCGCCA CCCATGTAAA 1551 ATTCACCCTT TCCGAACACG GCGGACGCTT
TACCATGACC ATCCAAGACA 1601 ACGGACAAGG TTTCGACACG GAGAAAATAG
GAGAACCCAC GGGCAGCCAT 1651 GTCGGACTGC ACATCATGCA GGAGCGTGCC
AAACGCATCC ATGCCGTTTT 1701 AGAAATCCGT TCCCAAGCTC AACAGGGAAC
CACCGTCTCA TTGACGGTTG 1751 CATCTGAAGA AAGCTTGAAA TGA
This corresponds to the amino acid sequence <SEQ ID 1656; ORF
561>:
TABLE-US-02011 m561.pep 1 MILPARFSDG ISLSLRLKLL TGLWVGLAAL
SVVLTLLLSL RLENAASVIE 51 EAGNLRMQAY RLAYMAGEGS PRAQIDNQVA
EFEKSLKRIA QSDAIHPLIP 101 SDTPLAYDLI QSMLIIDWQA HILPPLQSYR
RPTQVDLYRF AGNIELFLQA 151 LENANEKNTW WLRRFQWAIM LMTLVSSVLM
LFWHQIWVIR PLQALREGAE 201 RIGRRCFDIP VPEGGTPEFK QVGRCFNQMG
GRLKILYDDL EGQVAEQTRS 251 LEKQNQNLTL LYQTTRDLHQ SYIPQQAAEH
FLNRILPAVG ADSGRVCLDG 301 GSDVYVSIHH ADCGTAASDL GKYHEEIFPI
EYQNETLGRL LLSFPNGISL 351 DEDDRILLQT LGRQLGVSLA GAKQEEEKRL
LAVLQERNLI AQGLHDSIAQ 401 ALTFLNLQVQ MLETAFAENK REEAAENISF
IKTGVQECYE DVRELLLNFR 451 TKISNKEFPE AVADLFARFT QQTGITVETA
WENGSFLPPQ EAQLQMIFIL 501 QESLSNIRKH ARATHVKFTL SEHGGRFTMT
IQDNGQGFDT EKIGEPTGSH 551 VGLHIMQERA KRIHAVLEIR SQAQQGTTVS
LTVASEESLK *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02012 m561/g561 89.7% identity in 223 aa overlap 10 20 30
40 50 60 m561.pep
MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLTLLLSLRLENAASVIEEAGNLRMQAY
||||:|||||| |||||||||||||||||||||||||||:|||||||||||||||:|||| g561
MILPTRFSDGIPLSLRLKLLTGLWVGLAALSVVLILLLSFRLENAASVIEEAGNLKMQAY 10 20
30 40 50 60 70 80 90 100 110 120 m561.pep
RLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSDTPLAYDLIQSMLIIDWQA
||||||||||||||||||:||||||||||:||||||||||||:||||||||||||||||| g561
RLAYMAGEGSPRAQIDNQIAEFEKSLKRISQSDAIHPLIPSDNPLAYDLIQSMLIIDWQA 70 80
90 100 110 120 130 140 150 160 170 180 m561.pep
HILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTWWLRRFQWAIMLMTLVSSVLM
:||||||:||||||::||||||||||||||||||:||||||||||||:|||||||||||| g561
NILPPLQAYRRPTQIELYRFAGNIELFLQALENAGEKNTWWLRRFQWVIMLMTLVSSVLM 130
140 150 160 170 180 190 200 210 220 230 240 m561.pep
LFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGIPEFKQVGRCFNQMGGRLKILYDDL
|||||||||||||||||||||||:| ||||||| |: :: | g561
LFWHQIWVIRPLQALREGAERIGQRHFDIPVPEDVRPNSNRSGGVSTKWRSGX 190 200 210
220 230 250 260 270 280 290 300 m561.pep
EGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFLNRILPAVGADSGRVCLDG
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1657>:
TABLE-US-02013 a561.seq 1 ATGATACTGC CAGCCCGTTT TTCAGACGGC
ATCAGCCTTT CCCTGCGCCT 51 GAAACTCCTG ACCGGACTGT GGGTCGGGTT
GGCGGCATTG TCTGTCGTTT 101 TGACACTGCT GCTCTCTTTG CGTCTGGAAA
ACGCGGCCTC CGTCATCGAA 151 GAGGCGGGCA ACTTGAGAAT GCAGGCATAC
CGTCTGGCAT ACATGGCGGG 201 TGAAGGCTCG CCCCGTGCGC AAATTGACAA
TCAGGTTGCC GAATTTGAAA 251 AAAGTTTAAA ACGCATTGCC CAAAGCGATG
CCATCCATCC GCTGATTCCT 301 TCGGACACCC CTCTTGCTTA TGATTTGATA
CAATCCATGC TGATTATAGA 351 TTGGCAGGCA CACATCCTCC CCCCGCTCCA
GTCCTACCGG CGACCGACTC 401 AGGTCGATCT CTACCGCTTT GCCGGAAACA
TCGAACTGTT TTTGCAGGCA 451 TTGGAAAATG CCAACGAAAA AAACACATGG
TGGCTCAGGC GTTTTCAATG 501 GGCAATTATG TTGATGACGC TGGTGTCGTC
TGTACTGATG CTGTTTTGGC 551 ACCAGATTTG GGTTATCCGG CCGCTGCAGG
CGTTAAGGGA AGGTGCGGAA 601 CGCATCGGAC GGAGGTGTTT CGATATTCCG
GTTCCCGAAG GCGGTACGCC 651 GGAATTCAAA CAGGTCGGGC GTTGTTTCAA
TCAAATGGGC GGCAGGTTGA 701 AAATTTTATA TGATGATTTG GAAGGACAAG
TCGCCGAGCA GACACGCAGT 751 CTCGAAAAAC AAAATCAAAA CCTGACCCTG
CTGTACCAAA CTACACGGGA 801 TCTGCACCAA TCCTACATAC CGCAACAGGC
TGCAGAACAT TTTCTAAACC 851 GTATCCTGCC CGCCGTAGGA GCAGATTCCG
GCAGAGTTTG TTTGGACGGC 901 GGATCCGATG TTTATGTTTC CATTCATCAT
GCGGATTGCG GCACAGCAGC 951 TTCGGATTTG GGGAAGTACC ATGAGGAAAT
CTTCCCCATT GAGTACCAGA 1001 ACGAAACATT GGGCAGGCTG TTGCTCAGCT
TTCCAAACGG CATTTCTCTT 1051 GATGAAGACG ACCGCATCCT GCTTCAAACA
CTAGGCAGGC AATTGGGCGT 1101 ATCGCTTGCC GGCGCAAAAC AGGAGGAAGA
AAAACGCCTG CTTGCAGTAT 1151 TGCAGGAACG CAACCTGATT GCGCAAGGAT
TACATGACAG CATCGCACAA 1201 GCATTAACGT TCCTAAACCT ACAGGTACAG
ATGCTGGAAA CCGCCTTTGC 1251 CGAAAACAAA CGGGAGGAAG CCGCAGAAAA
CATCGGCTTC ATCAAAACAG 1301 GCGTGCAGGA ATGTTATGAA GATGTCCGCG
AACTGCTGCT CAACTTCCGT 1351 ACCAAAATCA GTAATAAAGA ATTTCCCGAA
GCCGTTGCCG ACCTATTCTC 1401 GCGCTTTACG CAACAGACCG GCACGACTGT
CGAAACCGCT TGGGAAAACG 1451 GCACGCACCT GCCTACACAG GACGAGCAGC
TCCAAATGAT TTTCATCCTG 1501 CAAGAAAGCT TGTCCAACAT CCGAAAACAT
GCCCACGCCA CCCATATCAA 1551 ATTCAGACTG CTCAAACAGG ATGGAAGTTT
TACAATGACC ATTCAAGACA 1601 ACGGACAGGG TTTTGACACG GAAAACATTG
GAGAACCATC GGGCAGCCAT 1651 GTCGGACTGC ATATCATGCA GGAGCGTGCC
AAACGCATCC ATGCCGTTTT 1701 AGAAATCCGT TCCCAAGCTC AACAGGGAAC
CACCGTCTCA TTGACGGTTG 1751 CATCTGAAGA AAGCTTGAAA TGA
This corresponds to the amino acid sequence <SEQ ID 1658; ORF
561.a>:
TABLE-US-02014 a561.pep 1 MILPARFSDG ISLSLRLKLL TGLWVGLAAL
SVVLTLLLSL RLENAASVIE 51 EAGNLRMQAY RLAYMAGEGS PRAQIDNQVA
EFEKSLKRIA QSDAIHPLIP 101 SDTPLAYDLI QSMLIIDWQA HILPPLQSYR
RPTQVDLYRF AGNIELFLQA 151 LENANEKNTW WLRRFQWAIM LMTLVSSVLM
LFWHQIWVIR PLQALREGAE 201 RIGRRCFDIP VPEGGTPEFK QVGRCFNQMG
GRLKILYDDL EGQVAEQTRS 251 LEKQNQNLTL LYQTTRDLHQ SYIPQQAAEH
FLNRILPAVG ADSGRVCLDG 301 GSDVYVSIHH ADCGTAASDL GKYHEEIFPI
EYQNETLGRL LLSFPNGISL 351 DEDDRILLQT LGRQLGVSLA GAKQEEEKRL
LAVLQERNLI AQGLHDSIAQ 401 ALTFLNLQVQ MLETAFAENK REEAAENIGF
IKTGVQECYE DVRELLLNFR 451 TKISNKEFPE AVADLFSRFT QQTGTTVETA
WENGTHLPTQ DEQLQMIFIL 501 QESLSNIRKH AHATHIKFRL LKQDGSFTMT
IQDNGQGFDT ENIGEPSGSH 551 VGLHIMQERA KRIHAVLEIR SQAQQGTTVS
LTVASEESLK * m561/a561 96.9% identity in 590 aa overlap 10 20 30 40
50 60 m561.pep
MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLILLLSLRLENAASVIEEAGNLRMQAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLILLLSLRLENAASVIEEAGNLRMQAY 10 20
30 40 50 60 70 80 90 100 110 120 m561.pep
RLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSDTPLAYDLIQSMLIIDWQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
RLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSDTPLAYDLIQSMLIIDWQA 70 80
90 100 110 120 130 140 150 160 170 180 m561.pep
HILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTWWLRRFQWAIMLMTLVSSVLM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
HILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTWWLRRFQWAIMLMTLVSSVLM 130
140 150 160 170 180 190 200 210 220 230 240 m561.pep
LFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPEFKQVGRCFNQMGGRLKILYDDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
LFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPEFKQVGRCFNQMGGRLKILYDDL 190
200 210 220 230 240 250 260 270 280 290 300 m561.pep
EGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFLNRILPAVGADSGRVCLDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
EGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQAAEHFLNRILPAVGADSGRVCLDG 250
260 270 280 290 300 310 320 330 340 350 360 m561.pep
GSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQNETLGRLLLSFPNGISLDEDDRILLQT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
GSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQNETLGRLLLSFPNGISLDEDDRILLQT 310
320 330 340 350 360 370 380 390 400 410 420 m561.pep
LGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQGLHDSIAQALTFLNLQVQMLETAFAENK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a561
LGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQGLHDSIAQALTFLNLQVQMLETAFAENK 370
380 390 400 410 420 430 440 450 460 470 480 m561.pep
REEAAENISFIKTGVQECYEDVRELLLNFRTKISNKEFPEAVADLFARFTQQTGITVETA
||||||||:|||||||||||||||||||||||||||||||||||||:||||||| ||||| a561
REEAAENIGFIKTGVQECYEDVRELLLNFRTKISNKEFPEAVADLFSRFTQQTGTTVETA 430
440 450 460 470 480 490 500 510 520 530 540 m561.pep
WENGSFLPPQEAQLQMIFILQESLSNIRKHARATHVKFTLSEHGGRFTMTIQDNGQGFDT ||||:
|| |: |||||||||||||||||||:|||:|| | :: | |||||||||||||| a561
WENGTHLPTQDEQLQMIFILQESLSNIRKHAHATHIKFRLLKQDGSFTMTIQDNGQGFDT 490
500 510 520 530 540 550 560 570 580 590 m561.pep
EKIGEPTGSHVGLHIMQERAKRIHAVLEIRSQAQQGTTVSLTVASEESLKX
|:||||:|||||||||||||||||||||||||||||||||||||||||||| a561
ENIGEPSGSHVGLHIMQERAKRIHAVLEIRSQAQQGTTVSLTVASEESLKX 550 560 570 580
590
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1659>:
TABLE-US-02015 g562.seq.. 1 atggcaagcc cgtcgagtct gcctttcaat
tcgggcaaga ccaaaccgac 51 ggcttttgcc gcgccggttt tggtcggaat
catgttttcc acgccgctgc 101 gggcgcggcg caggtctttg tggcgcacgt
cggtaacggt ttggtcgttg 151 gtcagtgcgt ggatggtggt cattgcgcct
ttgacgatgc cgacgctttc 201 gctcaacact ttggcaaccg gcgagaggca
gttggtggtg caggaagcgt 251 tggaaacgac ggtcatgtcg gcggtcagga
cgctgtcgtt cacgccgtac 301 acgacggttg catcgacatc gtcgccgccc
ggtgcggaaa tgaggacttt 351 tttcgcgccg ctttcgaggt ggattttggc
tttttctttg ctggtgaacg 401 cgccggtgca ttccatgacc aaatcgacac
cgagttcttt ccacggcagt 451 tcggcagggt tgcgggtcga gaagaagggg
attttgtcgc cgttgacgat 501 gaggttgccg ccgtcgtggg atacgtcggc
ttcaaagcgt ccgtgtacgg 551 tgtcgaattt ggtcagatgg gcgttggttt
caaggctgcc gctggcgttg 601 acggcgacga tttggagttg gtcttga
This corresponds to the amino acid sequence <SEQ ID 1660; ORF
562.ng>:
TABLE-US-02016 g562.pep 1 MASPSSLPFN SGKTKPTAFA APVLVGIMFS
TPLRARRRSL WRTSVTVWSL 51 VSAWMVVIAP LTMPTLSLNT LATGERQLVV
QEALETTVMS AVRTLSFTPY 101 TTVASTSSPP GAEMRTFFAP LSRWILAFSL
LVNAPVHSMT KSTPSSFHGS 151 SAGLRVEKKG ILSPLTMRLP PSWDTSASKR
PCTVSNLVRW ALVSRLPLAL 201 TATIWSWS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1661>:
TABLE-US-02017 m562.seq 1 ATGGCAAGCC CGTCGAGCCT GCCTTTCAAT
TCGGGCAGTA CCAAACCGAC 51 GGCTTTTGCC GCGCCGGTTT TGGTCGGAAT
CATGTTTTCC ACGCCGCTGC 101 GGGCGCGGCG CAGGTCTTTG TGGCGCACGT
CGGTAACGGT TTGGTCGTTG 151 GTCAGCGCGT GGATGGTGGT CATCGCGCCT
TTGACGATGC CGACGCTTTC 201 GCTCAACACT TTGGCAACCG GCGAGAGGCA
GTTGGTGGTG CAGGAAGCGT 251 TGGAAACGAC GGTCATGTCG GCGGTCAGGA
CGCTGTCGTT CACGCCGTAC 301 ACGACGGTTG CATCGACATC GTCGCCGCCC
GGTGCGGAAA TGAGGACTTT 351 TTTCGCGCCG CTTTCGAGGT GGATTTTGGC
TTTTTCTTTG CTGGTGAACG 401 CGCCGGTGCA TTCCATGACC AAATCGACAC
CGAGTTCTTT CCACGGCAGT 451 TCGGCAGGGT TGCGGGTCGA GAAGAAGGGG
ATTTTGTCGC CGTTGACGAT 501 GAGGTTGCCG CCGTCGTGGG ATACGTCGGC
TTCAAAGCGT CCGTGCACGG 551 TGTCGAATTT GGTCAGATGG GCGTTGGTTT
CAAGGCTGCC GCTGGCGTTG 601 ACGGCGACGA GTTGGAGTTG GTCTTGA
This corresponds to the amino acid sequence <SEQ ID 1662; ORF
562>:
TABLE-US-02018 m562.pep 1 MASPSSLPFN SGSTKPTAFA APVLVGIMFS
TPLRARRRSL WRTSVTVWSL 51 VSAWMVVIAP LTMPTLSLNT LATGERQLVV
QEALETTVMS AVRTLSFTPY 101 TTVASTSSPP GAEMRTFFAP LSRWILAFSL
LVNAPVHSMT KSTPSSFHGS 151 SAGLRVEKKG ILSPLTMRLP PSWDTSASKR
PCTVSNLVRW ALVSRLPLAL 201 TATSWSWS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02019 m562/g562 99.0% identity in 208 aa overlap 10 20 30
40 50 60 m562.pep
MASPSSLPFNSGSTKPTAFAAPVLVGIMFSTPLRARRRSLWRTSVTVWSLVSAWMVVIAP
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| g562
MASPSSLPFNSGKTKPTAFAAPVLVGIMFSTPLRARRRSLWRTSVTVWSLVSAWMVVIAP 10 20
30 40 50 60 70 80 90 100 110 120 m562.pep
LTMPTLSLNTLATGERQLVVQEALETTVMSAVRTLSFTPYTTVASTSSPPGAEMRTFFAP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g562
LTMPTLSLNTLATGERQLVVQEALETTVMSAVRTLSFTPYTTVASTSSPPGAEMRTFFAP 70 80
90 100 110 120 130 140 150 160 170 180 m562.pep
LSRWILAFSLLVNAPVHSMTKSTPSSFHGSSAGLRVEKKGILSPLTMRLPPSWDTSASKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g562
LSRWILAFSLLVNAPVHSMTKSTPSSFHGSSAGLRVEKKGILSPLTMRLPPSWDTSASKR 130
140 150 160 170 180 190 200 209 m562.pep
PCTVSNLVRWALVSRLPLALTATSWSWSX ||||||||||||||||||||||| ||||| g562
PCTVSNLVRWALVSRLPLALTATIWSWSX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1663>:
TABLE-US-02020 a562.seq 1 ATGGCAAGCC CGTCGAGTTT GTCTTTCAAT
TCGGGCAGTA CCAAACCGAC 51 GGCTTTTGCC GCGCCAGTTT TGGTCGGAAT
CATGTTTTCC ACGCCGCTGC 101 GGGCGCGGCG CAGGTCTTTG TGGCGCACGT
CGGTAACGGT TTGGTCGTTG 151 GTCAGCGCGT GGATGGTGGT CATCGCGCCT
TTGACGATGC CGACGCTTTC 201 GCTCAACACT TTGGCAACCG GCGAGAGGCA
GTTGGTGGTG CAGGAAGCGT 251 TGGAAACGAC GGTCATGTCG GCGGTCAGGA
TGCTGTCGTT CACGCCGTAC 301 ACGACGGTTG CATCGACATC GTCGCCGCCC
GGTGCGGAAA TGAGGACTTT 351 TTTCGCGCCG CTTTCCAGAT GAACTTTGGC
TTTTTCTTTG CTGGTGAACG 401 CGCCGGTGCA TTCCATGACC AAATCGACAC
CGAGTTCTTT CCACGGCAGT 451 TCGGCAGGGT TGCGGGTCNA GAAGAANGGG
ATTTTGTCGC CGTTGACGAT 501 GAGGTTGCCG CCGTCGTGGG ATACGTCGGC
TTCAAAGCGT CCGTGCACGG 551 TGTCGAATTT GGTGAGGTGG GCGTTGGTTT
CAAGGCTGCC GCTGGCGTTG 601 ACGGCGACGA TTTGGAGTTG GTCTTGA
This corresponds to the amino acid sequence <SEQ ID 1664; ORF
562.a>:
TABLE-US-02021 a562.pep 1 MASPSSLSFN SGSTKPTAFA APVLVGIMFS
TPLRARRRSL WRTSVTVWSL 51 VSAWMVVIAP LTMPTLSLNT LATGERQLVV
QEALETTVMS AVRMLSFTPY 101 TTVASTSSPP GAEMRTFFAP LSR*TLAFSL
LVNAPVHSMT KSTPSSFHGS 151 SAGLRVXKXG ILSPLTMRLP PSWDTSASKR
PCTVSNLVRW ALVSRLPLAL 201 TATIWSWS* m562/a562 96.6% identity in 208
aa overlap 10 20 30 40 50 60 m562.pep
MASPSSLPFNSGSTKPTAFAAPVLVGIMFSTPLRARRRSLWRTSVTVWSLVSAWMVVIAP
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| a562
MASPSSLSFNSGSTKPTAFAAPVLVGIMFSTPLRARRRSLWRTSVTVWSLVSAWMVVIAP 10 20
30 40 50 60 70 80 90 100 110 120 m562.pep
LTMPTLSLNTLATGERQLVVQEALETTVMSAVRTLSFTPYTTVASTSSPPGAEMRTFFAP
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| a562
LTMPTLSLNTLATGERQLVVQEALETTVMSAVRMLSFTPYTTVASTSSPPGAEMRTFFAP 70 80
90 100 110 120 130 140 150 160 170 180 m562.pep
LSRWILAFSLLVNAPVHSMTKSTPSSFHGSSAGLRVEKKGILSPLTMRLPPSWDTSASKR |||
||||||||||||||||||||||||||||||| | ||||||||||||||||||||| a562
LSRXTLAFSLLVNAPVHSMTKSTPSSFHGSSAGLRVXKXGILSPLTMRLPPSWDTSASKR 130
140 150 160 170 180 190 200 209 m562.pep
PCTVSNLVRWALVSRLPLALTATSWSWSX ||||||||||||||||||||||| ||||| a562
PCTVSNLVRWALVSRLPLALTATIWSWSX 190 200
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1665>:
TABLE-US-02022 g563.seq 1 ATGAACAAAA CCCTCTATCG TGTGATTTTC
AACCGCAAAC GCGGTGCTGT 51 GGTAGCTGTT GCCGAAACCA CCAAGCGCGA
AGGTAAAAGC TGTGCCGATA 101 GTGGTTCGGG CAGCGTTTAT GTGAAATCCG
TTTCTTTCAT TCCTACTCAT 151 TCCAAAGCCT TTTGTTTTTC TGCATTAGGC
TTTTCTTTAT GTTTGGCTTT 201 GGGTACGGTC AATATTGCTT TTGCTGACGG
CATTATTACT GATAAAGCTG 251 CTCCTAAAAC CCAACAAGCC ACGATTCTGC
AAACAGGTAA CGGCATACCG 301 CAAGTCAATA TTCAAACCcc tACTTCGGCa
ggGGTTTCTG TTAATCAATA 351 TGCCCAGTTT GATGTGGGTA ATcgcGGGGC
GATTTTAAAC AACAGTCGCA 401 GCAACACCCA AACACAGCTA GGCGGTTGGA
TTCAAGGCAA TCCTTGGTTG 451 ACAAGGGGCG AAGCACGTGT GGTTGTAAAC
CAAATCAACA GCAGCCATCC 501 TTCACAACTG AATGGCTATA TTGAAGTGGG
TGGACGACGT GCAGAAGTCG 551 TTATTGCCAA TCCGGCAGGG ATTGCAGTCA
ATGGTGGTGG TTTTATCAAT 601 GCTTCCCGTG CCACTTTGAC GACAGGCCAA
CCGCAATATC AAGCAGGAGA 651 CTTTAGCGGC TTTAAGATAA GGCAAGGCAA
TGCTGTAATC GCCGGACACG 701 GTTTGGATGC CCGTGATACC GATTTCACAC
GTATTCTTTT GTATGCCAAC 751 AAAATCACCT TGATCAGTAC GGCCGAACAA
GCAGGCATTC GTAATCAAGG 801 GCAGTTGTTT GCTTCTTCCG GTAATGTGGC
GATTGATGCA AATGGCCGTT 851 TGGTCAATAG TGGCACGATG GCTGCCGCCA
ATGTGCAAGA TATGAATAAT 901 ACAGCGGAAC ACAAAGTCAA TATCCGCAGT
CAAGCCTTTG AAAACAGCGG 951 TACGGCGGTA TCGCAACAAG GCACTCAAAT
TCACAGTCAA TCGATTCAAA 1001 ACACTGGCAA ATTATTGTCG GCAGGAACAG
AGGATTTAGC CGTTTCAGGC 1051 AGCCTGAACA ATCAAAATGG CGAAATAGCG
ACCAATCAAC AACTGATTAT 1101 TCACGATGGT CAGCAATCTA CCGTTGTCAT
TGATAATACG AATGGCACGA 1151 TACAATCAGG CCGTGATGTT GCCATTCAGG
CAAAATCGTT ATCCAACAAC 1201 GGCACACTTG CCGCTGATAA TAAACTGGAT
ATTGCGTTAC AAGATGATTT 1251 TTATGTAGAA CGCAAGATCG TGGCGGGCAA
TGAATTGTCG CTCAGTACAC 1301 GAGGCAGCCT GAAAAATTCA CATACCTTGC
AAGCAGGAAA ACGCATTCGG 1351 ATTAAAGCAA ATAACCTTGA TAATGCAGTA
CAAGGCAACA TTCAATCCGG 1401 CGGTACGACA GACATTGGCA CGCAGCACAA
TTTAACCAAT AGAGGCTTGA 1451 TTGACGGACA ACAAACCAAA ATCCAAGCCG
GGCAAATGAA TAATATCGGT 1501 ACAGGTCGGA TTTATGGCGA CAATATCGCT
ATTGCGGCTA CCCGCTTAGA 1551 CAATCAAGAT GAAAACGGTA CAGGTGCCGC
CATTGCGGCA CGCGAAAACC 1601 TGAATTTAGG CATTGAACAA TTAAATAACC
GTGAAAACAG TCTGATTTAC 1651 AGCGGTAACG ATATGGCGGT TGGCGGCGCA
TTAGATACCA ATGACCAAGC 1701 CACAGGCAAA GCCCAAAGGA TACACAATGC
CGGCGCAATC ATTGAAGCTG 1751 CAGGCAAAAT GCGTTTAGGT GTAGAAAAGC
TGCACAATAC CAATGAGCAT 1801 TTGAAAACGC AGTTGGTAGA AACAGGGCGC
GAGCGTATTG TTGATTACGA 1851 AGCATTTGGA CGACACGAAT TATTGCGAGA
AGGCACGCAA CATGAATTAG 1901 GCTGGTTTGT CTACAACAAT GAATCAGACC
ACTTACGCAC CCCTGATGGA 1951 GTGGCGCATG AAAATTGGCA TAAATACGAT
TATGAAAAAG TAACGCAAGA 2001 AACTCAAGTA ACCGGAACTG CGCCTGCTAA
AATCATTGCA GGTAGCGATT 2051 TGATTATTGA TAGCAAAGCA GTCTTCAACA
GCGACAGCCG AATCATTGCC 2101 GGCGGCCAAT TGCTTGTGCA AACAGAAAAA
GACGGTTTGC ATAACGAGCA 2151 AACCTTTGGC GAGAAGAAAG TCTTCAGCGA
AAATGGTAAG TTGCACAACT 2201 ACTGGCGTGC GCGTCGTAAA GGACATGATG
AAACAGGGCA TCGTGAACAA 2251 AATTATACTT TGCCGGAGGA AATCACACGC
GACATTTCAC TGGGTTCATT 2301 TGCCTATGAA TCGCATAGCA AAGCATTAAG
CCGTCATGCG CCCAGCCAAG 2351 GCACTGAGTT GCCACAAAGT AACCGGGATA
ATATCCGTAC TGCGAAAAGC 2401 AACGGTATTT CGCTACCCTA TACGCCCAAT
TCTTTTACCC CATTACCCGG 2451 CAGCAGCTTA TACATTATCA ATCCTGCCAA
TAAAGGCTAT CTTGTTGAAA 2501 CCGATCCACG CTTTGCCAAC TACCGTCAAT
GGTTGGGTAG TGACTATATG 2551 CTGGGCAGCC TCAAACTAGA CCCAAACAAT
TTACATAAAC GTTTGGGTGA 2601 TGGTTATTAC GAGCAACGTT TAATCAATGA
ACAAATCGCA GAGCTGACAG 2651 GGCATCGTCG TTTAGACGGT TATCAAAACG
ACGAAGAACA ATTTAAAGCC 2701 TTAATGGATA ATGGCGCGAC TGCGGCACGT
TCGATGAATC TCAGCGTTGG 2751 CATTGCATTA AGTGCCGAGC AAGCAGCGCA
ACTGACCAGC GATATTGTTT 2801 GGTTGGTACA AAAAGAAGTT AAACTTCCTG
ATGGCGGCAC ACAAACCGTA 2851 TTGATGCCAC AGGTTTATGT ACGCGTTAAA
AATGGCGGCA TAGACGGTAA 2901 AGGTGCATTG TTGTCAGGCA GCAATACACA
AATCAATGTT TCAGGCAGCC 2951 TGAAAAACTC AGGCACGATT GCAGGGCGCA
ATGCGCTTAT TATCAATACC 3001 GATACGCTAG ACAATATCGG TGGGCGTATT
CATGCGCAAA AATCAGCGGT 3051 TACGGCCACA CAAGACATCA ATAATATTGG
CGGCATTCTT TCTGCCGAAC 3101 AGACATTATT GCTCAATGCG GGTAACAACA
TCAACAACCA AAGCACGGCC 3151 AAGAGCAGTC AAAATGCACA AGGTAGCAGC
ACCTACCTAG ACCGAATGGC 3201 AGGTATTTAT ATCACAGGCA AAGAAAAAGG
TGTTTTAGCA GCGCAGGCAG 3251 GCAAAGACAT CAACATCATT GCCGGTCAAA
TCAGCAATCA ATCAGATCAA 3301 GGGCAAACCC GGCTGCAGGC AGGACGCGAC
ATTAACCTGG ATACGGTACA 3351 AACCGGCAAA TATCAAGAAA TCCATTTTGA
TGCCGATAAC CATACCATCC 3401 GAGGTTCAAC GAACGAAGTC GGCAGCAGCA
TTCAAACAAA AGGCGATGTT 3451 ACCCtatTGT CAGGGAATAA TCTCAATGCC
AAAGCTGCCG AAGTCGGCAG 3501 CGCAAAAGGC ACACTTGCCG TGTATGCTAA
AAATGACATT ACTATCAGCT 3551 CAGGCATCCA TGCCGGCCAA GTTGATGATG
CGTCCAAACA TACAGGCAGA 3601 AGCGGCGGCG GTAATAAATT AGTCATTACC
GATAAAGCCC AAAGTCATCA 3651 CGAAACTGCT CAAAGCAGCA CCTTTGAAGG
CAAGCAAGTT GTATTGCAGG 3701 CAGGAAACGA TGCCAACATC CTTGGCAGTA
ATGTTATTTC CGATAATGGC 3751 ACCCGGATTC AAGCAGGCAA TCATGTTCGC
ATTGGTACAA CCCAAACTCA 3801 AAGCCAAAGC GAAACCTATC ATCAAACCCA
AAAATCAGGA TTGATGAGTG 3851 CAGGTATCGG CTTCACTATT GGCAGCAAGA
CAAACACACA AGAAAACCAA 3901 TCCCAAAGCA ACGAACATAC AGGCAGTACC
GTAGGCAGCC TGAAAGGCGA 3951 TACCACCATT GTTGCAAGCA AACACTACGA
ACAAACCGGC AGCAACGTTT 4001 CCAGCCCTGA GGGCAACAAC CTTATCAGCA
CGCAAAGTAT GGATATTGGC 4051 GCAGCACAAA ACCAATTAAA CAGCAAAACC
ACCCAAACCT ACGAACAAAA 4101 AGGCTTAACG GTGGGCATTC AGTTCGCCCG
TTACCGATTT GGCACAACAA 4151 GCGATTGCCG TAGCACACAA AGCAGCAAAC
AAGTCGGACA AAGCAAAAAC 4201 GACCGCGTTA ATGCCATGGC GGCTGCCAAT
GCAGGTTGGC AGGCCTATCA 4251 AACAGGCAAA GGCGCACAAA ACTTAGCCAA
TGGTACAACC AATGCCAAAC 4301 AAGTCAGCAT CTCCATAACC TACGGCGAAC
AGCAAAACCG ACAAACCACC 4351 CAAGTTCAAG CCAATCAAGC CCAAGCGAGT
CAAATTCAAG CAGGCGGCAA 4401 AACTACCCTT TATTGCCGAA GGTGCGGCGA
ACAATCCAAT ATCAACATCA 4451 CAGGCTCAGG TGTTTCAGGC AGAGCAGGAA
CCGGCCTGAT TGCCGATAAG 4501 CAAATCCATC TGCAATCAGC CGAGCAAAGC
AATACCGAAC GCAGCCAAAA 4551 CAAATCAGCA GGCTGGAACG CAGGTGCTGC
CGTATCATTC GGACAAGGAG 4601 GCTGGTCATT AGGCGTTGCC GCAGGCGGCA
ATGTCGGCAA AGGCTACGGC 4651 TATGGCGATA GCGTAACCCA CCGCCATAGC
CATATTGGCG ACAAAGGCAG 4701 CCAAACCCTT ATCCAAAGTG GTGGCGATAC
CATCATCAAA GGCGCGCAAG 4751 TACGCGGCAA AGGCGTACAA GTCAATGCCA
AAAACCTAAG CATTCAAAGT 4801 GTACAAGATA GAGAAACTTA TCAAAGCAAA
CAACAAAACG CCGGTGCACA 4851 AGTTACCGTA GGTTATGGCT TCAGTGCCAG
TGGCGATTAC AGCCAAAGCA 4901 AAATCCGAGC CGACCATGCT TCGGTAACCG
AGCAAAGCGG TATTTATGCC 4951 GGAGAAGACG GCTATCAAAT CAAGGTCGGA
AACCATACAG GCCTCAAAGG 5001 CGGCATCATC ACCAGCAGCC AAAGCGCAAA
AGACAAGGGT AAAAACCGAT 5051 TCAGCACAGG CACACTCGCC GGCAGTGATA
TTCAAAATTA CAGCCAATAC 5101 GAAGGAAAAA GTTTTGGATT GGGTGCCAGC
GTTGCCGTAA GCGGCAAAAC 5151 ACTGGGACAG GGCGCAAAAA ATAAACCTCA
AGACAAACAC CTGACAAGCA 5201 TAGCCGATAA AAACGGCGCA AGTTCATCAG
TAGGGTACGG CAGCGACAGC 5251 GACAGTCAAA GCAGCATCAC AAAAAGCGGC
ATCAATACCC CCAAAAACAT 5301 TCAAATCACA GACGAAGCCG CACAAATCAG
GCTGACAGGC AAAATAGCGG 5351 CACAAACCAA AGCCGATATT GATACAAACG
TAACCACAGA CACCGCCGAA 5401 CGACATTCGG GCAGCCTGAA AAACATATTT
GACAAAGATA GAGTGCAAAG 5451 TGAACTGGAT TTACAAAgaA CCGTCAGCCA
AGATTTTAGT AAAAATGTTC 5501 AACAAACCAA TACCGAGATT AACCAACATT
TAGACAAACT CAAAGCAGAC 5551 AAAGAAGCAG CCGAAACAGC AGCAGCCGAG
GCATTAGCCA ATGGCGATAT 5601 GGAAACTGCC AAACGCAAAG CCCATGAAGC
TCAAGATGCG GCAGCAAAAG 5651 CAGATAATTG GCAACAAGGC AAAGTCATTC
TCAACATGTT AGCCTCAGGT 5701 TTAGCTGAGC CGACCCAAAG CGGAGCgggc
ATCGCTGCGG CTACCGCATC 5751 GCCagaCGTA TCGTATGCGA TTGGACAGCA
CTTTAAagaT TTAGCCGGTC 5801 AAAACGCGAA TGGCAAACTA ACCGCCAGTC
AagaAACCGC TCACGTTCTT 5851 GCCCACGCGG TATTAGGAGC AGCGGTTGCC
GCAGCATGAG GCAACAATGC 5901 CCCGGCAGGA GCATTGGGTG CGGGCGGGTc
ggAagcggCC GCCCCAATCA 5951 TCGGCAAATG GCTGTACGGC AAAGGAGAcg
gcggcagccT GAATgcggag 6001 gaaaAAGaga CCGTTTCGGC GATTACAAGG
ATGCTGggta cGgctGCCGG 6051 AGCAGCTGAG GGAAACTCGT CCGCCGATGC
TGTGTGGGGT TGTTTTcaaa 6101 cggctTCaga TTTCGCTTCC TCTTTTTCAT
ATCCTATAAA CATGTGA
This corresponds to the amino acid sequence <SEQ ID 1666; ORF
563.ng>:
TABLE-US-02023 g563.pep.. 1 MNKTLYRVIF NRKRGAVVAV AETTKREGKS
CADSGSGSVY VKSVSFIPTH 51 SKAPFCFSALG FSLCLALGTV NIAFADGIIT
DKAAPKTQQA TILQTGNGIP 101 QVNIQTPTSA GVSVNQYAQF DVGNRGAILN
NSRSNTQTQL GGWIQGNPWL 151 TRGEARVVVN QINSSHPSQL NGYIEVGGRR
AEVVIANPAG IAVNGGGFIN 201 ASRATLTTGQ PQYQAGDFSG FKIRQGNAVI
AGHGLDARDT DFTRILLYAN 251 KITLISTAEQ AGIRNQGQLF ASSGNVAIDA
NGRLVNSGTM AAANVQDMNN 301 TAEHKVNIRS QAFENSGTAV SQQGTQIHSQ
SIQNTGKLLS AGTEDLAVSG 351 SLNNQNGEIA TNQQLIIHDG QQSTVVIDNT
NGTIQSGRDV AIQAKSLSNN 401 GTLAADNKLD IALQDDFYVE RKIVAGNELS
LSTRGSLKNS HTLQAGKRIR 451 IKANNLDNAV QGNIQSGGTT DIGTQHNLTN
RGLIDGQQTK IQAGQMNNIG 501 TGRIYGDNIA IAATRLDNQD ENGTGAAIAA
RENLNLGIEQ LNNRENSLIY 551 SGNDMAVGGA LDTNDQATGK AQRIHNAGAI
IEAAGKMRLG VEKLHNTNEH 601 LKTQLVETGR ERIVDYEAFG RHELLREGTQ
HELGWFVYNN ESDHLRTPDG 651 VAHENWHKYD YEKVTQETQV TGTAPAKIIA
GSDLIIDSKA VFNSDSRIIA 701 GGQLLVQTEK DGLHNEQTFG EKKVFSENGK
LHNYWRARRK GHDETGHREQ 751 NYTLPEEITR DISLGSFAYE SHSKALSRHA
PSQGTELPQS NRDNIRTAKS 801 NGISLPYTPN SFTPLPGSSL YIINPANKGY
LVETDPRFAN YRQWLGSDYM 851 LGSLKLDPNN LHKRLGDGYY EQRLINEQIA
ELTGHRRLDG YQNDEEQFKA 901 LMDNGATAAR SMNLSVGIAL SAEQAAQLTS
DIVWLVQKEV KLPDGGTQTV 951 LMPQVYVRVK NGGIDGKGAL LSGSNTQINV
SGSLKNSGTI AGRNALIINT 1001 DTLDNIGGRI HAQKSAVTAT QDINNIGGIL
SAEQTLLLNA GNNINNQSTA 1051 KSSQNAQGSS TYLDRMAGIY ITGKEKGVLA
AQAGKDINII AGQISNQSDQ 1101 GQTRLQAGRD INLDTVQTGK YQEIHFDADN
HTIRGSTNEV GSSIQTKGDV 1151 TLLSGNNLNA KAAEVGSAKG TLAVYAKNDI
TISSGIHAGQ VDDASKHTGR 1201 SGGGNKLVIT DKAQSHHETA QSSTFEGKQV
VLQAGNDANI LGSNVISDNG 1251 TRIQAGNHVR IGTTQTQSQS ETYHQTQKSG
LMSAGIGFTI GSKTNTQENQ 1301 SQSNEHTGST VGSLKGDTTI VASKHYEQTG
SNVSSPEGNN LISTQSMDIG 1351 AAQNQLNSKT TQTYEQKGLT VGIQFARYRF
GTTSDCRSTQ SSKQVGQSKN 1401 DRVNAMAAAN AGWQAYQTGK GAQNLANGTT
NAKQVSISIT YGEQQNRQTT 1451 QVQANQAQAS QIQAGGKTTL YCRRCGEQSN
INITGSGVSG RAGTGLIADK 1501 QIHLQSAEQS NTERSQNKSA GWNAGAAVSF
GQGGWSLGVA AGGNVGKGYG 1551 YGDSVTHRHS HIGDKGSQTL IQSGGDTIIK
GAQVRGKGVQ VNAKNLSIQS 1601 VQDRETYQSK QQNAGAQVTV GYGFSASGDY
SQSKIRADHA SVTEQSGIYA 1651 GEDGYQIKVG NHTGLKGGII TSSQSAKDKG
KNRFSTGTLA GSDIQNYSQY 1701 EGKSFGLGAS VAVSGKTLGQ GAKNKPQDKH
LTSIADKNGA SSSVGYGSDS 1751 DSQSSITKSG INTPKNIQIT DEAAQIRLTG
KIAAQTKADI DTNVTTDTAE 1801 RHSGSLKNIF DKDRVQSELD LQRTVSQDFS
KNVQQTNTEI NQHLDKLKAD 1851 KEAAETAAAE ALANGDMETA KRKAHEAQDA
AAKADNWQQG KVILNMLASG 1901 LAEPTQSGAG IAAATASPDV SYAIGQHFKD
LAGQNANGKL TASQETAHVL 1951 AHAVLGAAVA AAXGNNAPAG ALGAGGSEAA
APIIGKWLYG KGDGGSLNAE 2001 EKETVSAITR MLGTAAGAAE GNSSADAVWG
CFQTASDFAS SFSYPINM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1667>:
TABLE-US-02024 m563.seq.. 1 ATGAATAAAA CTCTCTATCG TGTAATTTTC
AACCGCAAAC GTGGGGCTGT 51 GGTAGCCGTT GCTGAAACTA CCAAGCGCGA
AGGTAAAAGC TGTGCCGATA 101 GTGATTCAGG CAGCGCTCAT GTGAAATCTG
TTCCTTTTGG TACTACTCAT 151 GCACCTGTTT GTCGTTCAAA TATCTTTTCT
TTTTCTTTAT TGGGCTTTTC 201 TTTATGTTTG GCTGTAGGTA CGGCCAATAT
TGCTTTTGCT GATGGCATTA 251 TTGCTGATAA AGCTGCTCCT AAAACTCAAC
AAGCCACGAT TCTGCAAACA 301 GGTAACGGCA TACCGCAAGT CAATATTCAA
ACCCCTACTT CGGCAGGGGT 351 TTCTGTTAAT CAATACGCCC AGTTTGATGT
GGGTAATCGC GGGGCGATTT 401 TAAACAACAG CCGCAGCAAC ACCCAAACAC
AGCTAGGCGG TTGGATTCAA 451 GGTAATCCTT GGTTGGCAAG GGGCGAAGCA
CGTGTGGTTG TAAACCAAAT 501 CAACAGCAGC CATTCTTCAC AAATGAATGG
CTATATTGAA GTGGGCGGAC 551 GACGTGCAGA AGTCGTTATT GCCAATCCGG
CAGGGATTGC AGTCAATGGT 601 GGTGGTTTTA TCAATGCTTC CCGTGCCACT
TTGACGACAG GCCAACCGCA 651 ATATCAAGCA GGAGACCTTA GCGGCTTTAA
GATAAGGCAA GGCAATGTTG 701 TAATCGCCGG ACACGGTTTG GATGCCCGTG
ATACCGATTT CACACGTATT 751 CTCAGTTATC ATTCCAAAAT TGATGCACCC
GTATGGGGAC AAGATGTTCG 801 TGTCGTCGCG GGACAAAACG ATGTGGTCGC
AACAGGTAAT GCACATTCGC 851 CTATTCTCAA TAATGCTGCT GCCAATACGT
CAAACAATAC AGCCAACAAC 901 GGCACACATA TCCCTTTATT TGCGATTGAT
ACAGGCAAAT TAGGAGGTAT 951 GTATGCCAAC AAAATCACCT TGATCAGTAC
GGCCGAGCAA GCAGGCATTC 1001 GTAATCAAGG GCAGTTGTTT GCTTCTTCCG
GTAATGTGGC GATTGATGCA 1051 AATGGCCGTT TAGTCAATAG TGGCACGATG
GCTGCCGCCA ATGCGAAAGA 1101 TACGGATAAT ACAGCGGAAC ACAAAGTCAA
TATCCGCAGT CAGGGCGTTG 1151 AAAACAGCGG TACGGCGGTA TCGCAACAAG
GCACTCAAAT TCACAGTCAG 1201 TCGATTCAAA ACACTGGCAC ATTATTGTCC
TCAGGCGAAA TATTGATTCA 1251 CAATTCGGGC AGCCTGAAAA ATGAAACATC
AGGCACCATT GAAGCCGCTC 1301 GTTTGGCTAT TGATACCGAC ACACTTAATA
ATCAAGGCAA ACTCTCTCAA 1351 ACAGGTTCAC AAAAACTCCA TATTGATGCA
CAAGGCAAAA TGGATAACCG 1401 TGGCCGCATG GGTTTACAAG ATACCGCACC
AACCGCGTCA AATGGTTCAA 1451 GCAATCAAAC CGGCAATAGT TACAATGCAT
CTTTCCATTC ATCCACTACC 1501 ACACCAACAA CGGCAACAGG TACGGGTACT
GCAACCGTTT CTATATCAAA 1551 CATAACTGCG CCTACCTTTG CTGATGGGAC
AATTCGCACT CATGGTGCAC 1601 TGGATAATTC AGGCAGTATT ATTGCCAATG
GTCAAACAGA TGTTAGTGCG 1651 CAACAAGGTT TAAATAATGC AGGACAAATA
GACATTCATC AGTTAAATGC 1701 AAAAGGTTCG GCGTTTGACA ATCACAATGG
AACAATTATC AGTGATGCGG 1751 TCCACATTCA AGCCGGCAGC CTGAATAATC
AAAATGGCAA CATCACAACA 1801 CGCCAACAGT TAGAGATTGA AACCGATCAA
CTGGATAACG CTCATGGCAA 1851 GTTATTATCA GCAGAAATAG CGGATTTAGC
CGTTTCAGGC AGCCTGAACA 1901 ATCAAAATGG CGAAATAGCG ACCAATCAAC
AACTGATTAT TCACGATGGT 1951 CAGCAATCTA CCGCTGTCAT TGATAATACG
AATGGCACGA TACAATCAGG 2001 CCGTGATGTT GCTATTCAGG CAAAATCGTT
ATCCAACAAC GGCACACTTG 2051 CCGCTGATAA TAAACTGGAT ATTGCGTTAC
AAGATGATTT TTATGTAGAA 2101 CGCAATATCG TGGCGGGCAA TGAATTGTCG
CTCAGTACAC GAGGCAGCCT 2151 GAAAAATTCA CATACTTTGC AAGCAGGAAA
ACGCATTCGG ATTAAAGCAA 2201 ATAACCTTGA TAATGCAGCA CAAGGCAACA
TTCAATCCGG CGGTACGACA 2251 GACATTGGCA CGCAGCACAA TTTAACCAAT
AGAGGCTTGA TTGACGGACA 2301 ACAAACCAAA ATCCAAGCCG GGCAAATGAA
TAATATCGGT ACAGGTCGGA 2351 TTTATGGCGA CAATATCGCT ATTGCGGCTA
CCCGCTTAGA CAATCAAGAT 2401 GAAAACGGTA CAGGTGCCGC CATTGCGGCA
CGTGAAAACC TGAATTTAGG 2451 CATCGGACAA TTAAACAACC GTGAAAACAG
TCTGATTTAC AGCGGTAACG 2501 ATATGGCGGT TGGCGGCGCA TTAGATACCA
ATGGCCAAGC CACAGGCAAA 2551 GCCCAAAGGA TACACAATGC CGGCGCAACC
ATTGAAGCTG CAGGCAAAAT 2601 GCGTTTAGGT GTAGAAAAGC TGCACAATAC
CAATGAGCAT TTGAAAACGC 2651 AGTTGGTAGA AACAGGGCGC GAGCATATTG
TTGATTACGA AGCATTTGGA 2701 CGACACGAAT TATTGCGAGA AGGCACGCAA
CATGAATTAG GCTGGTCTGT 2751 CTATAACGAT GAATCAGACC ACTTACGCAC
CCCTGATGGA GCGGCGCATG 2801 AAAATTGGCA TAAATACGAT TATGAAAAAG
TCACCCAAAA AACCCAAGTT 2851 ACCCAAACTG CGCCAGCCAA AATCATTTCA
GGTAATGATT TAACCATTGA 2901 TGGTAAAGAA GTATTTAATA CCGATAGCCA
AATCATTGCT GGTGGCAATC 2951 TCATTGTACA AACAGAAAAA GACGGTTTGC
ATAACGAGCA AACCTTTGGC 3001 GAAAAGAAAG TATTCAGTGA AAATGGCAAA
TTACACAGCT ATTGGCGTGA 3051 GAAACATAAA GGACGAGACT CAACGGGACA
TAGCGAACAA AATTACACTT 3101 TGCCGGAGGA AATCACACGC AACATTTCAC
TGGGTTCATT TGCCTATGAA 3151 TCGCATCGCA AAGCATTAAG CCATCATGCG
CCCAGCCAAG GCACTGAGTT 3201 GCCGCAAAGC AACGGTATTT CGCTACCCTA
TACGTCCAAT TCTTTTACCC 3251 CATTACCCAG CAGCAGCTTA TACATTATCA
ATCCTGTCAA TAAAGGCTAT 3301 CTTGTTGAAA CCGATCCACG CTTTGCCAAC
TACCGTCAAT GGTTGGGTAG 3351 TGACTATATG CTGGACAGCC TCAAACTAGA
CCCAAACAAT TTACATAAAC 3401 GTTTGGGTGA TGGTTATTAC GAGCAACGTT
TAATCAATGA ACAAATCGCA 3451 GAGCTGACAG GGCATCGTCG TTTAGACGGT
TATCAAAACG ACGAAGAACA 3501 ATTTAAAGCC TTAATGGATA ATGGCGCGAC
TGCGGCACGT TCGATGAATC 3551 TCAGCGTTGG CATTGCATTA AGTGCCGAGC
AAGTAGCGCA ACTGACCAGC 3601 GATATTGTTT GGTTGGTACA AAAAGAAGTT
AAGCTTCCTG ATGGCGGCAC 3651 ACAAACCGTA TTGGTGCCAC AGGTTTATGT
ACGCGTTAAA AATGGCGACA 3701 TAGACGGTAA AGGTGCATTG TTGTCAGGCA
GCAATACACA AATCAATGTT 3751 TCAGGCAGCC TGAAAAACTC AGGCACGATT
GCAGGGCGCA ATGCGCTTAT 3801 TATCAATACC GATACGCTAG ACAATATCGG
TGGGCGTATT CATGCGCAAA 3851 AATCAGCGGT TACGGCCACA CAAGACATCA
ATAATATTGG CGGCATGCTT 3901 TCTGCCGAAC AGACATTATT GCTCAACGCA
GGCAACAACA TCAACAGCCA 3951 AAGCACCACC GCCAGCAGTC AAAATACACA
AGGCAGCAGC ACCTACCTAG 4001 ACCGAATGGC AGGTATTTAT ATCACAGGCA
AAGAAAAAGG TGTTTTAGCA 4051 GCGCAGGCAG GAAAAGACAT CAACATCATT
GCCGGTCAAA TCAGCAATCA 4101 ATCAGAGCAA GGGCAAACCC GGCTGCAAGC
AGGGCGCGAC ATTAACCTAG 4151 ATACGGTACA AACCAGCAAA CATCAAGCAA
CCCATTTTGA TGCCGATAAC 4201 CATGTTATTC GCGGTTCAAC GAACGAAGTC
GGCAGCAGCA TTCAAACAAA 4251 AGGCGATGTT ACCCTATTGT CAGGGAATAA
CCTCAATGCC AAAGCTGCCG 4301 AAGTCAGCAG CGCAAACGGT ACACTCGCTG
TGTCTGCCAA AAATGACATC 4351 AACATCAGCG CAGGCATCAA CACGACCCAT
GTTGATGATG CGTCCAAACA 4401 CACAGGCAGA AGCGGTGGTG GCAATAAATT
AGTCATTACC GATAAAGCCC 4451 AAAGTCATCA CGAAACCGCC CAAAGCAGCA
CCTTTGAAGG CAAGCAAGTT 4501 GTATTGCAGG CAGGAAACGA TGCCAACATC
CTTGGCAGCA ATGTTATTTC 4551 CGATAATGGC ACCCAGATTC AAGCAGGCAA
TCATGTTCGC ATTGGTACAA 4601 CCCAAACTCA AAGCCAAAGC GAAACCTATC
ATCAAACCCA GAAATCAGGA 4651 TTGATGAGTG CAGGTATCGG CTTCACTATT
GGCAGCAAGA CAAACACACA 4701 AGAAAACCAA TCCCAAAGCA ACGAACATAC
AGGCAGTACC GTAGGCAGCT 4751 TGAAAGGCGA TACCACCATT GTTGCAGGCA
AACACTACGA ACAAATCGGC 4801 AGTACCGTTT CCAGCCCGGA AGGCAACAAT
ACCATCTATG CCCAAAGCAT 4851 AGACATTCAA GCGGCACACA ACAAATTAAA
CAGTAATACC ACCCAAACCT 4901 ATGAACAAAA AGGCCTAACG GTGGCATTCA
GTTCGCCCGT TACCGATTTG 4951 GCACAACAAG CGATTGCCGT AGCACAAAGC
AGCAAACAAG TCGGACAAAG 5001 CAAAAACGAC CGCGTTAATG CCATGGCGGC
TGCCAATGCA GGCTGGCAAG 5051 CCTATCAAAC AGGTAAGAGT GCACAAAACT
TAGCCAATGG TACAACCAAT 5101 GCCAAACAAG TCAGCATCTC CATAACCTAC
GGCGAACAGC AAAACCGACA 5151 AACCACCCAA GTTCAAGCCA ATCAAGCCCA
AGCGAGTCAA ATTCAAGCAG 5201 GTGGTAAAAC CACATTAATC GCCACAGGCG
CAGCAGAACA ATCCAATATC 5251 AACATCGCAG GCTCAGATGT TGCCGGCAAA
GCAGGCACAA TCCTGATTGC 5301 CGATAACGAC ATCACACTCC AATCAGCCGA
GCAAAGCAAT ACCGAACGCG 5351 GCCAAAACAA ATCGGCAGGC TGGAACGCAG
GTGCTGCCGT ATCATTCGGA 5401 CAAGGAGGCT GGTCATTAGG CGTTACCGCA
GGCGGCAATG TCGGCAAAGG 5451 CTACGGCAAT GGCGACAGCA TCACCCACCG
CCATAGCCAT ATCGGCGACA 5501 AAGGCAGCCA AACCCTTATC CAAAGCGGTG
GCGACACTAC CATCAAAGGC 5551 GCGCAAGTAC GCGGCAAAGG CGTACAAGTC
AATGCCAAAA ACCTAAGTAT 5601 TCAAAGCGTA CAAGATAGAG AAACCTATCA
AAGCAAACAA CAAAACGCCA 5651 GTGCACAAGT TACCGTAGGT TATGGCTTCA
GTGCCGGTGG CGATTACAGC 5701 CAAAGCAAAA TCCGAGCCGA CCATGTTTCA
GTAACCGAGC AAAGCGGTAT 5751 TTATGCCGGA GAAGACGGCT ATCAAATCAA
GGTCGGAAAC CATACAGACC 5801 TCAAAGGCGG CATCATCACC AGTACCCAAA
GCGCAGAAGA CAAGGGTAAA 5851 AACCGCTTTC AGACGGCCAC CCTCACCCAT
AGCGACATCA AAAACCACAG 5901 CCAATACAAA GGCGAAAGTT TTGGATTGGG
CGCAAGTGCG TCCATAAGCG 5951 GCAAAACACT GGGACAGGGC GCACAAAATA
AACCTCAAAA CAAACACCTG 6001 ACAAGCGTAG CCGATAAAAA CAGCGCAAGT
TCATCAGTGG GTTATGGCAG 6051 CGACAGCGAC AGTCAAAGCA GCATCACAAA
AAGCGGCATC AACACCCGCA 6101 ACATTCAAAT CACCGACGAA GCCGCACAAA
TCCGGCTGAC AGGCAAAACA 6151 GCGGCACAAA CCAAAGCCGA TATTGATACA
AACGTAACCA CAGACACCGC 6201 CGAACGACAT TCGGGCAGCT TGAAGAACAC
CTTCAACAAA GAAGCGGTGC
6251 AAAGTGAACT GGATTTACAA AGAACCGTCA GCCAAGATTT TAGTAAAAAT 6301
GTTCAACAAG CCAATACCGA GATTAACCAA CATTTAGACA AACTCAAAGC 6351
AGACAAAGAA GCAGCCGAAA CAGCAGCAGC CGAGGCATTA GCCAATGGCG 6401
ATATGGAAAC TGCCAAACGC AAAGCCCATG AAGCTCAAGA TGCGGCAGCA 6451
AAAGCAGATA ATTGGCAACA AGGCAAAGTC ATTCTCAACA TGTTAGCCTC 6501
AGGTTTAGCT GCGCCGACCC AAAGCGGAGC GGGCATCGCT GCGGCTACCG 6551
CATCGCCAGC CGTATCGTAT GCGATTGGAC AGCACTTTAA AGATTTAGCC 6601
GGTCAAAACG CGAATGGTAA ACTAACCGCC AGTCAAGAAA CCGCACACGT 6651
TCTTGCCCAC GCGGTATTAG GAGCAGCGGT TGCCGCAGTA GGAGACAACA 6701
ATGCTCTAGC AGGAGCATTG AGTGCGGGCG GGTCGGAAGC GGCTGCGCCT 6751
TACATCAGCA AATGGTTATA CGGCAAAGAA AAAGGAAGCG ACTTAACGGC 6801
GGAAGAGAAA GAGACTGTAA CAGCGATTAC AAATGTATTG GGTACGGCTA 6851
CGGGTGCGGC AGTCGGCAAC AGCGCAACAG ATGCAGCGCA AGGCAGCCTG 6901
AATGCGCAAA GTGCGGTGGA GAATAATGAT ACTGTAGAGC AAGTGAAATT 6951
TGCTCTTAGG CACCCTAGAA TTGCTATTGC AATTGGATCT GTACATAAAG 7001
ATCCTGGCTC TACATTAGAG CCTAATATTT CAACAATTGC TTCAACTTTT 7051
CAATTAAATT TATTTCCTAA TAGTGAATTT GGTGGTGAAG GTGGAGTTGG 7101
CAATGCATTC AGGCACGTTT TATGGCAAGC AACCATCACA CGAGAATTTG 7151
GCAAAGATAT TGCTGTTAAA GTAGGAAATA GTCATGAAAG TGGGGAAAAA 7201
ATTAATTATT CTATAAGACG TAATCTTTCA TTAGATAAAG CAGATGAAAT 7251
GATTGATCAA CTAAATAACG AAATAGGAAG AGAAATAGCA TTAAATACCA 7301
ATAGGTTAAA CACAAAAGAG TTAGTTGGAT TAATTCTGGA AACTTATAAA 7351
AATAATGGTT TTTATCAAGC AGAAAGAAAC AGTAATGGAA ATTATGATGT 7401
TGTAAGAAAA AGATTATCTG AAAAAGATTA CCAGAATACA AGCAATATAT 7451
TGATTCACTT AGATAATACT GGTGCCGGAT TTAAAATTCA GCAGAGGAGA 7501
AAACAAATCA GAGCACAAAT TTCAGCCAGA CAATGGAGAA GATAA
This corresponds to the amino acid sequence <SEQ ID 1668; ORF
563>:
TABLE-US-02025 m563.pep.. 1 MNKTLYRVIF NRKRGAVVAV AETTKREGKS
CADSDSGSAH VKSVPFGTTH 51 APVCRSNIFS FSLLGFSLCL AVGTANIAFA
DGIIADKAAP KTQQATILQT 101 GNGIPQVNIQ TPTSAGVSVN QYAQFDVGNR
GAILNNSRSN TQTQLGGWIQ 151 GNPWLARGEA RVVVNQINSS HSSQMNGYIE
VGGRRAEVVI ANPAGIAVNG 201 GGFINASRAT LTTGQPQYQA GDLSGFKIRQ
GNVVIAGHGL DARDTDFTRI 251 LSYHSKIDAP VWGQDVRVVA GQNDVVATGN
AHSPILNNAA ANTSNNTANN 301 GTHIPLFAID TGKLGGMYAN KITLISTAEQ
AGIRNQGQLF ASSGNVAIDA 351 NGRLVNSGTM AAANAKDTDN TAEHKVNIRS
QGVENSGTAV SQQGTQIHSQ 401 SIQNTGTLLS SGEILIHNSG SLKNETSGTI
EAARLAIDTD TLNNQGKLSQ 451 TGSQKLHIDA QGKMDNRGRM GLQDTAPTAS
NGSSNQTGNS YNASFHSSTT 501 TPTTATGTGT ATVSISNITA PTFADGTIRT
HGALDNSGSI IANGQTDVSA 551 QQGLNNAGQI DIHQLNAKGS AFDNHNGTII
SDAVHIQAGS LNNQNGNITT 601 RQQLEIETDQ LDNAHGKLLS AEIADLAVSG
SLNNQNGEIA TNQQLIIHDG 651 QQSTAVIDNT NGTIQSGRDV AIQAKSLSNN
GTLAADNKLD IALQDDFYVE 701 RNIVAGNELS LSTRGSLKNS HTLQAGKRIR
IKANNLDNAA QGNIQSGGTT 751 DIGTQHNLTN RGLIDGQQTK IQAGQMNNIG
TGRIYGDNIA IAATRLDNQD 801 ENGTGAAIAA RENLNLGIGQ LNNRENSLIY
SGNDMAVGGA LDTNGQATGK 851 AQRIHNAGAT IEAAGKMRLG VEKLHNTNEH
LKTQLVETGR EHIVDYEAFG 901 RHELLREGTQ HELGWSVYND ESDHLRTPDG
AAHENWHKYD YEKVTQKTQV 951 TQTAPAKIIS GNDLTIDGKE VFNTDSQIIA
GGNLIVQTEK DGLHNEQTFG 1001 EKKVFSENGK LHSYWREKHK GRDSTGHSEQ
NYTLPEEITR NISLGSFAYE 1051 SHRKALSHHA PSQGTELPQS NGISLPYTSN
SFTPLPSSSL YIINPVNKGY 1101 LVETDPRFAN YRQWLGSDYM LDSLKLDPNN
LHKRLGDGYY EQRLINEQIA 1151 ELTGHRRLDG YQNDEEQFKA LMDNGATAAR
SMNLSVGIAL SAEQVAQLTS 1201 DIVWLVQKEV KLPDGGTQTV LVPQVYVRVK
NGDIDGKGAL LSGSNTQINV 1251 SGSLKNSGTI AGRNALIINT DTLDNIGGRI
HAQKSAVTAT QDINNIGGML 1301 SAEQTLLLNA GNNINSQSTT ASSQNTQGSS
TYLDRMAGIY ITGKEKGVLA 1351 AQAGKDINII AGQISNQSEQ GQTRLQAGRD
INLDTVQTSK HQATHFDADN 1401 HVIRGSTNEV GSSIQTKGDV TLLSGNNLNA
KAAEVSSANG TLAVSAKNDI 1451 NISAGINTTH VDDASKHTGR SGGGNKLVIT
DKAQSHHETA QSSTFEGKQV 1501 VLQAGNDANI LGSNVISDNG TQIQAGNHVR
IGTTQTQSQS ETYHQTQKSG 1551 LMSAGIGFTI GSKTNTQENQ SQSNEHTGST
VGSLKGDTTI VAGKHYEQIG 1601 STVSSPEGNN TIYAQSIDIQ AAHNKLNSNT
TQTYEQKGLT VAFSSPVTDL 1651 AQQAIAVAQS SKQVGQSKND RVNAMAAANA
GWQAYQTGKS AQNLANGTTN 1701 AKQVSISITY GEQQNRQTTQ VQANQAQASQ
IQAGGKTTLI ATGAAEQSNI 1751 NIAGSDVAGK AGTILIADND ITLQSAEQSN
TERGQNKSAG WNAGAAVSFG 1801 QGGWSLGVTA GGNVGKGYGN GDSITHRHSH
IGDKGSQTLI QSGGDTTIKG 1851 AQVRGKGVQV NAKNLSIQSV QDRETYQSKQ
QNASAQVTVG YGFSAGGDYS 1901 QSKIRADHVS VTEQSGIYAG EDGYQIKVGN
HTDLKGGIIT STQSAEDKGK 1951 NRFQTATLTH SDIKNHSQYK GESFGLGASA
SISGKTLGQG AQNKPQNKHL 2001 TSVADKNSAS SSVGYGSDSD SQSSITKSGI
NTRNIQITDE AAQIRLTGKT 2051 AAQTKADIDT NVTTDTAERH SGSLKNTFNK
EAVQSELDLQ RTVSQDFSKN 2101 VQQANTEINQ HLDKLKADKE AAETAAAEAL
ANGDMETAKR KAHEAQDAAA 2151 KADNWQQGKV ILNMLASGLA APTQSGAGIA
AATASPAVSY AIGQHFKDLA 2201 GQNANGKLTA SQETAHVLAH AVLGAAVAAV
GDNNALAGAL SAGGSEAAAP 2251 YISKWLYGKE KGSDLTAEEK ETVTAITNVL
GTATGAAVGN SATDAAQGSL 2301 NAQSAVENND TVEQVKFALR HPRIAIAIGS
VHKDPGSTLE PNISTIASTF 2351 QLNLFPNSEF GGEGGVGNAF RHVLWQATIT
REFGKDIAVK VGNSHESGEK 2401 INYSIRRNLS LDKADEMIDQ LNNEIGREIA
LNTNRLNTKE LVGLILETYK 2451 NNGFYQAERN SNGNYDVVRK RLSEKDYQNT
SNILIHLDNT GAGFKIQQRR 2501 KQIRAQISAR QWRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 563
shows 79.1% identity over a 2316 aa overlap with a predicted ORF
(ORF 563.ng) from N. gonorrhoeae:
TABLE-US-02026 m563/g563 10 20 30 40 50 g563.pep
MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSGSGSVYVKSVSFIPTH-----SKAFC
|||||||||||||||||||||||||||||||||| |||::|||| | || |: | m563.pep
MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSDSGSAHVKSVPFGTTHAPVCRSNIFS 10 20
30 40 50 60 60 70 80 90 100 110 g563.pep
FSALGFSLCLALGTVNIAFADGIITDKAAPKTQQATILQTGNGIPQVNIQTPTSAGVSVN ||
||||||||:||:|||||||||:||||||||||||||||||||||||||||||||||| m563.pep
FSLLGFSLCLAVGTANIAFADGIIADKAAPKTQQATILQTGNGIPQVNIQTPTSAGVSVN 70 80
90 100 110 120 120 130 140 150 160 170 g563.pep
QYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLTRGEARVVVNQINSSHPSQLNGYIE
|||||||||||||||||||||||||||||||||||:||||||||||||||| ||:|||||
m563.pep
QYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLARGEARVVVNQINSSHSSQMNGYIE 130
140 150 160 170 180 180 190 200 210 220 230 g563.pep
VGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQYQAGDFSGFKIRQGNAVIAGHGL
||||||||||||||||||||||||||||||||||||||||||:|||||||||:|||||||
m563.pep
VGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQYQAGDLSGFKIRQGNVVIAGHGL 190
200 210 220 230 240 240 g563.pep
DARDTDFTRIL-------------------------------------------------
||||||||||| m563.pep
DARDTDFTRILSYHSKIDAPVWGQDVRVVAGQNDVVATGNAHSPILNNAAANTSNNTANN 250
260 270 280 290 300 250 260 270 280 290 g563.pep
----------------LYANKITLISTAEQAGIRNQGQLFASSGNVAIDANGRLVNSGTM
:||||||||||||||||||||||||||||||||||||||||||| m563.pep
GTHIPLFAIDTGKLGGMYANKITLISTAEQAGIRNQGQLFASSGNVAIDANGRLVNSGTM 310
320 330 340 350 360 300 310 320 330 340 g563.pep
AAANVQDMNNTAEHKVNIRSQAFENSGTAVSQQGTQIHSQSIQNTGKLLSAGT-------
||||::| :||||||||||||: ||||||||||||||||||||||| |||:| m563.pep
AAANAKDTDNTAEHKVNIRSQGVENSGTAVSQQGTQIHSQSIQNTGTLLSSGEILIHNSG 370
380 390 400 410 420 g563.pep
------------------------------------------------------------
m563.pep
SLKNETSGTIEAARLAIDTDTLNNQGKLSQTGSQKLHIDAQGKMDNRGRMGLQDTAPTAS 430
440 450 460 470 480 g563.pep
------------------------------------------------------------
m563.pep
NGSSNQTGNSYNASFHSSTTTPTTATGTGTATVSISNITAPTFADGTIRTHGALDNSGSI 490
500 510 520 530 540 g563.pep
------------------------------------------------------------
m563.pep
IANGQTDVSAQQGLNNAGQIDIHQLNAKGSAFDNHNGTIISDAVHIQAGSLNNQNGNITT 550
560 570 580 590 600 350 360 370 380 g563.pep
-----------------------EDLAVSGSLNNQNGEIATNQQLIIHDGQQSTVVIDNT
||||||||||||||||||||||||||||||:||||| m563.pep
RQQLEIETDQLDNAHGKLLSAEIADLAVSGSLNNQNGEIATNQQLIIHDGQQSTAVIDNT 610
620 630 640 650 660 390 400 410 420 430 440 g563.pep
NGTIQSGRDVAIQAKSLSNNGTLAADNKLDIALQDDFYVERKIVAGNELSLSTRGSLKNS
|||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||
m563.pep
NGTIQSGRDVAIQAKSLSNNGTLAADNKLDIALQDDFYVERNIVAGNELSLSTRGSLKNS 670
680 690 700 710 720 450 460 470 480 490 500 g563.pep
HTLQAGKRIRIKANNLDNAVQGNIQSGGTTDIGTQHNLTNRGLIDGQQTKIQAGQMNNIG
|||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||
m563.pep
HTLQAGKRIRIKANNLDNAAQGNIQSGGTTDIGTQHNLTNRGLIDGQQTKIQAGQMNNIG 730
740 750 760 770 780 510 520 530 540 550 560 g563.pep
TGRIYGDNIAIAATRLDNQDENGTGAAIAARENLNLGIEQLNNRENSLIYSGNDMAVGGA
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
m563.pep
TGRIYGDNIAIAATRLDNQDENGTGAAIAARENLNLGIGQLNNRENSLIYSGNDMAVGGA 790
800 810 820 830 840 570 580 590 600 610 620 g563.pep
LDTNDQATGKAQRIHNAGAIIEAAGKMRLGVEKLHNTNEHLKTQLVETGRERIVDYEAFG ||||
|||||||||||||| |||||||||||||||||||||||||||||||:|||||||| m563.pep
LDTNGQATGKAQRIHNAGATIEAAGKMRLGVEKLHNTNEHLKTQLVETGREHIVDYEAFG 850
860 870 880 890 900 630 640 650 660 670 680 g563.pep
RHELLREGTQHELGWFVYNNESDHLRTPDGVAHENWHKYDYEKVTQETQVTGTAPAKIIA
||||||||||||||| |||:||||||||||:|||||||||||||||:|||| |||||||:
m563.pep
RHELLREGTQHELGWSVYNDESDHLRTPDGAAHENWHKYDYEKVTQKTQVTQTAPAKIIS 910
920 930 940 950 960 690 700 710 720 730 740 g563.pep
GSDLIIDSKAVFNSDSRIIAGGQLLVQTEKDGLHNEQTFGEKKVFSENGKLHNYWRARRK |:||
||:| |||:||:|||||:|:|||||||||||||||||||||||||||:||| ::| m563.pep
GNDLTIDGKEVFNTDSQIIAGGNLIVQTEKDGLHNEQTFGEKKVFSENGKLHSYWREKHK 970
980 990 1000 1010 1020 750 760 770 780 790 800 g563.pep
GHDETGHREQNYTLPEEITRDISLGSFAYESHSKALSRHAPSQGTELPQSNRDNIRTAKS |:|
||| ||||||||||||:|||||||||| |||||:||||||||||||| m563.pep
GRDSTGHSEQNYTLPEEITRNISLGSFAYESHRKALSHHAPSQGTELPQSN--------- 1030
1040 1050 1060 1070 810 820 830 840 850 860 g563.pep
NGISLPYTPNSFTPLPGSSLYIINPANKGYLVETDPRFANYRQWLGSDYMLGSLKLDPNN
||||||| |||||||:||||||||:|||||||||||||||||||||||| |||||||||
m563.pep
-GISLPYTSNSFTPLPSSSLYIINPVNKGYLVETDPRFANYRQWLGSDYMLDSLKLDPNN 1080
1090 1100 1110 1120 1130 870 880 890 900 910 920 g563.pep
LHKRLGDGYYEQRLINEQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIAL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
m563.pep
LHKRLGDGYYEQRLINEQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIAL 1140
1150 1160 1170 1180 1190 930 940 950 960 970 980 g563.pep
SAEQAAQLTSDIVWLVQKEVKLPDGGTQTVLMPQVYVRVKNGGIDGKGALLSGSNTQINV
||||:||||||||||||||||||||||||||:|||||||||| |||||||||||||||||
m563.pep
SAEQVAQLTSDIVWLVQKEVKLPDGGTQTVLVPQVYVRVKNGDIDGKGALLSGSNTQINV 1200
1210 1220 1230 1240 1250 990 1000 1010 1020 1030 1040 g563.pep
SGSLKNSGTIAGRNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGILSAEQTLLLNA
||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||
m563.pep
SGSLKNSGTIAGRNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGMLSAEQTLLLNA 1260
1270 1280 1290 1300 1310 1050 1060 1070 1080 1090 1100 g563.pep
GNNINNQSTAKSSQNAQGSSTYLDRMAGIYITGKEKGVLAAQAGKDINIIAGQISNQSDQ
|||||:|||: ||||:||||||||||||||||||||||||||||||||||||||||||:|
m563.pep
GNNINSQSTTASSQNTQGSSTYLDRMAGIYITGKEKGVLAAQAGKDINIIAGQISNQSEQ 1320
1330 1340 1350 1360 1370 1110 1120 1130 1140 1150 1160 g563.pep
GQTRLQAGRDINLDTVQTGKYQEIHFDADNHTIRGSTNEVGSSIQTKGDVTLLSGNNLNA
||||||||||||||||||:|:| |||||||:||||||||||||||||||||||||||||
m563.pep
GQTRLQAGRDINLDTVQTSKHQATHFDADNHVIRGSTNEVGSSIQTKGDVTLLSGNNLNA 1380
1390 1400 1410 1420 1430 1170 1180 1190 1200 1210 1220 g563.pep
KAAEVGSAKGTLAVYAKNDITISSGIHAGQVDDASKHTGRSGGGNKLVITDKAQSHHETA
|||||:||:||||| |||||:||:||:: :||||||||||||||||||||||||||||||
m563.pep
KAAEVSSANGTLAVSAKNDINISAGINTTHVDDASKHTGRSGGGNKLVITDKAQSHHETA 1440
1450 1460 1470 1480 1490 1230 1240 1250 1260 1270 1280 g563.pep
QSSTFEGKQVVLQAGNDANILGSNVISDNGTRIQAGNHVRIGTTQTQSQSETYHQTQKSG
|||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||
m563.pep
QSSTFEGKQVVLQAGNDANILGSNVISDNGTQIQAGNHVRIGTTQTQSQSETYHQTQKSG 1500
1510 1520 1530 1540 1550 1290 1300 1310 1320 1330 1340 g563.pep
LMSAGIGFTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVASKHYEQTGSNVSSPEGNN
||||||||||||||||||||||||||||||||||||||||||:||||| ||:||||||||
m563.pep
LMSAGIGFTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVAGKHYEQIGSTVSSPEGNN 1560
1570 1580 1590 1600 1610 1350 1360 1370 1380 1390 1400 g563.pep
LISTQSMDIGAAQNQLNSKTTQTYEQKGLTVGIQFARYRFGTTSDCRSTQSSKQVGQSKN |
:||:|| ||:|:|||:||||||||||||::: :: : :||||||||||| m563.pep
TIYAQSIDIQAAHNKLNSNTTQTYEQKGLTVAFSSPVTDLAQQA-IAVAQSSKQVGQSKN 1620
1630 1640 1650 1660 1410 1420 1430 1440 1450 1460 g563.pep
DRVNAMAAANAGWQAYQTGKGAQNLANGTTNAKQVSISITYGEQQNRQTTQVQANQAQAS
||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||
m563.pep
DRVNAMAAANAGWQAYQTGKSAQNLANGTTNAKQVSISITYGEQQNRQTTQVQANQAQAS 1670
1680 1690 1700 1710 1720 1470 1480 1490 1500 1510 1520 g563.pep
QIQAGGKTTLYCRRCGEQSNINITGSGVSGRAGTGLIADKQIHLQSAEQSNTERSQNKSA
|||||||||| :|||||||:|| |:|:||| ||||::| |||||||||||:||||| m563.pep
QIQAGGKTTLIATGAAEQSNINIAGSDVAGKAGTILIADNDITLQSAEQSNTERGQNKSA 1730
1740 1750 1760 1770 1780 1530 1540 1550 1560 1570 1580 g563.pep
GWNAGAAVSFGQGGWSLGVAAGGNVGKGYGYGDSVTHRHSHIGDKGSQTLIQSGGDTIIK
|||||||||||||||||||:|||||||||| |||:|||||||||||||||||||||| ||
m563.pep
GWNAGAAVSFGQGGWSLGVTAGGNVGKGYGNGDSITHRHSHIGDKGSQTLIQSGGDTTIK 1790
1800 1810 1820 1830 1840 1590 1600 1610 1620 1630 1640 g563.pep
GAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNAGAQVTVGYGFSASGDYSQSKIRADHA
||||||||||||||||||||||||||||||||||:|||||||||||:||||||||||||:
563.pep
GAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNASAQVTVGYGFSAGGDYSQSKIRADHV 1850
1860 1870 1880 1890 1900 1650 1660 1670 1680 1690 1700 g563.pep
SVTEQSGIYAGEDGYQIKVGNHTGLKGGIITSSQSAKDKGKNRFSTGTLAGSDIQNYSQY
||||||||||||||||||||||| ||||||||:|||:|||||||:|:||: |||:|:|||
m563.pep
SVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAEDKGKNRFQTATLTHSDIKNHSQY 1910
1920 1930 1940 1950 1960 1710 1720 1730 1740 1750 1760 g563.pep
EGKSFGLGASVAVSGKTLGQGAKNKPQDKHLTSIADKNGASSSVGYGSDSDSQSSITKSG
:|:|||||||:::|||||||||:||||:|||||:||||:|||||||||||||||||||||
m563.pep
KGESFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNSASSSVGYGSDSDSQSSITKSG 1970
1980 1990 2000 2010 2020 1770 1780 1790 1800 1810 1820 g563.pep
INTPKNIQITDEAAQIRLTGKIAAQTKADIDTNVTTDTAERHSGSLKNIFDKDRVQSELD |||
:|||||||||||||||| |||||||||||||||||||||||||| |:|: |||||| m563.pep
INT-RNIQITDEAAQIRLTGKTAAQTKADIDTNVTTDTAERHSGSLKNTFNKEAVQSELD 2030
2040 2050 2060 2070 2080 1830 1840 1850 1860 1870 1880 g563.pep
LQRTVSQDFSKNVQQTNTEINQHLDKLKADKEAAETAAAEALANGDMETAKRKAHEAQDA
|||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||
m563.pep
LQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAETAAAEALANGDMETAKRKAHEAQDA 2090
2100 2110 2120 2130 2140 1890 1900 1910 1920 1930 1940 g563.pep
AAKADNWQQGKVILNMLASGLAEPTQSGAGIAAATASPDVSYAIGQHFKDLAGQNANGKL
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
m563.pep
AAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATASPAVSYAIGQHFKDLAGQNANGKL 2150
2160 2170 2180 2190 2200 1950 1960 1970 1980 1990 2000 g563.pep
TASQETAHVLAHAVLGAAVAAAXGNNAPAGALGAGGSEAAAPIIGKWLYGKGDGGSLNAE
|||||||||||||||||||||: ||| ||||:||||||||| |:|||||| |::|:|| m563.pep
TASQETAHVLAHAVLGAAVAAVGDNNALAGALSAGGSEAAAPYISKWLYGKEKGSDLTAE 2210
2220 2230 2240 2250 2260 2010 2020 2030 2040 2049 g563.pep
EKETVSAITRMLGTAAGAAEGNSSADAVWGCFQTASDFASSFSYPINMX |||||:|||
:||||:||| |||::||: | ::: | m563.pep
EKETVTAITNVLGTATGAAVGNSATDAAQGSLNAQSAVENNDTVEQVKFALRHPRIAIAI 2270
2280 2290 2300 2310 2320 m563.pep
GSVHKDPGSTLEPNISTIASTFQLNLFPNSEFGGEGGVGNAFRHVLWQATITREFGKDIA 2330
2340 2350 2360 2370 2380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1669>:
TABLE-US-02027 m564.seq 1 ATGAACCGCA CCCTGTACAA AGTTGTATTT
AACAAACATC GAAACTGCAT 51 GATAGCCGTT GCTGAAAATG CCAAACGCGA
GGGCAAAAAC ACAGCCGACA 101 CCCAAGCTGT AGGTATTTTG CCAAATGATA
TTGCGGGCTT TGCGGGTTTT 151 ATCCATTCTA TCTCTGTTAT CTCATTCTCC
CTTTCATTAC TGCTCGGTTC 201 TGCCCTTATC CTGACTTCTT CTTCTGCTAC
TGCCCAAGGT ATCGTTGCCG 251 ACAAATCCGC ACCTGCACAG CAACAGCCTA
CCATCCTGCA AACAGGTAAC 301 GGCATACCGC AAGTCAATAT TCAAACCCCT
ACTTCGGCAG GGGTTTCTGT 351 TAATCAATAC GCCCAGTTTG ATGTGGGTAA
TCGCGGGGCG ATTTTAAACA 401 ACAGTCGCAG CAACACCCAA ACACAGCTAG
GCGGTTGGAT TCAAGGCAAT 451 CCTTGGTTGG CAAGGGGCGA AGCACGTGTG
GTTGTAAACC AAATCAACAG 501 CAGCCATTCT TCACAACTGA ATGGCTATAT
TGAAGTGGGC GGACGACGTG 551 CAGAAGTCGT TATTGCCAAT CCGGCAGGGA
TTGCAGTCAA TGGTGGTGGT 601 TTTATCAATG CTTCCCGTGC CACTTTGACG
ACAGCCCAAC CGCAATATCA 651 AGCAGGAGAC CTTAGCGGCT TTAAGATAAG
GCAAGGCAAT GTTGTAATCG 701 CCGGACACGG TTTGGATGCA CGTGATACCG
ATTACACACG TATTCTCAGT 751 TATCATTCCA AAATTGATGC ACCCGTATGG
GGACAAGATG TTCGTGTCGT 801 CGCGGGACAA AACGATGTGG CCGCAACAGG
TGATGCACAT TCGCCTATTC 851 TCAATAATGC TGCTGCCAAT ACGTCAAACA
ATACAGCCAA CAACGGCACA 901 CATATCCCTT TATTTGCGAT TGATACAGGC
AAATTAGGAG GTATGTATGC 951 CAACAAAATC ACCTTGATCA GTACGGTCGA
GCAAGCAGGC ATTCGTAATC 1001 AAGGGCAATG GTTTGCCTCA GCCGGCAATG
TGGCAGTGAA TGCTGAGGGT 1051 AAACTGGTCA ACACGGGCAT GATTGCAGCG
ACGGGAGAAA ATCATGCGGT 1101 TTCACTTCAT GCCGGCAATG TTCATAATAG
CGGTACGGTT GCCTCACAGG 1151 ATGATGCCAA TATTCACAGC CAGACGCTGG
ACAATTCAGG TACGGTCTTA 1201 TCCTCAGGTC GATTGACTGT TCGTAATTTA
GGCCGTCTGA AAAACCAAAA 1251 CAACGGTACG ATCCAGGCTG CCCGCTTAGA
TATGTCAACA GGTGGTTTGG 1301 ATAACACAGG TAATATTACT CAAACAGGTT
CACAAGCATT GGATTTGGTA 1351 TCTGCCGGCA AATTCGATAA CAGTGGCAAG
ATTGGTGTAA GTGACGTTCC 1401 ACAGACCGGT TTGAATCCCA ATCCATCAGT
CATACCACAG ATTCCGAGTA 1451 CTGCAACAGG TTCAGGCAGC AGCACTGTCT
CGGTATCTAA GCCTGGTTCA 1501 AACAATCCCG TTTCACCTAC AGCACCTGCA
AAAAACTACG CCGTAGGACG 1551 CATTCAAACA ACAGGAGCAT TTGACAATGC
AGGATCAATT AATGCGGGTG 1601 GGCAAATTGA CATTGCCGCC CAAAACGGTT
TGGGAAATTC GGGTAGTCTG 1651 AATGCGGCTA AACTACGAGT ATCAGGCGAT
TCATTTAACA ATACGGTAAA 1701 AGGCAAACTC CAGGCACACG ATCTGGCTGT
TAACACTCAA ACTGCTAAAA 1751 ACAGCGGTCA CTTATTAACT CAAACCGGCA
AGATTGATAA CCGTGAACTG 1801 CATAATGCCG GAGAAATTGC CGCCAACAAT
CTGACACTCA TTCATTCGGG 1851 CCGCTTGAGC AATGATAAAA AAGGCAATAT
TCGAGCTGCA CATTTACAGC 1901 TTGATACCGC CGGTTTACAT AATGCAGGTA
ACATTCTTGC CGATAGTGGA 1951 ACCGTTACCA CCAAGAATAA TCTTCGCAAT
ACAGGAAAAG TTTCTGTTGC 2001 ACGACTGAAT ACCGAAGGTC AGACTCTAGA
TAATACGCGC GGACGTATAG 2051 AGGCTGAAAC GGTTAACATC CAAAGTCAGC
AACTGACTAA CCAAAGCGGC 2101 CATATTACTG CTACCGAACA ACTGACTATC
AATAGTCGAA ATGTAGACAA 2151 CCAAAACGGC AAACTCCTAT CTGCAAACCA
AGCACAATTA GCTGTTTCAG 2201 ACGGCCTATA CAACCAACAT GGTGAAATTG
CCACCAACCG GCAGTTGTCT 2251 ATTCACGATA AAAATCAAAA CACTTTGGCG
TTAAACAATG CGGATGGCAC 2301 GATTCAATCT GCCGGTAATG TATCGCTACA
AGCCAAATCA CTCGCCAACA 2351 ATGGCACATT AACAGCCGGT AACAAACTGG
ATATTGCTTT GACGGACGAT 2401 TTCGTCGTAG AGCGCGACCT CACTGCAGGC
AAACAATTAA ATCTAAGCAT 2451 AAAAGGCCGT CTGAAAAATA CCCATACCCT
ACAAGCAGGC CATACGCTCA 2501 AACTCAATGC CGGCAATATA GATAACCAAG
TTACAGGCAA AATTATTGGT 2551 GGAGAACAAA CGGACATCAC ATCCGAACAG
CATGTTGACA ACAGGGGCTT 2601 GATCAACAGC GACGGTTTGA CCCACATCGG
TGCAGGTCAA ACCCTGACCA 2651 ACACCGGGAC AGGCAAAATC TATGGCAACC
ATATTGCCCT GGACGCGCAA 2701 ATACTGCTTA ACCGGGAAGA AACGACGGAA
GGCAGTACCA AAGCGGGGGC 2751 AATAGCTGCA AGGAAACGTT TGGATATTGG
AGCGAAAGAG ATTCATAACC 2801 AAGAAGGTGC CCTACTATCC AGCGAAGGTA
TTTTTGCCGT AgGTAATCGA 2851 CTGGATGAAC AACATCATGC GGCAGGCATG
GCCGATACCT TTGTTAATGG 2901 CAGTGCCGGT TTGGAAGTAC AAGGTGATGC
ATTGATGTCC GTTCGGAATA 2951 TGCAGAATAT CAATAATCAC TTTAAAACAG
AGACATACTT AGCCAAAGCG 3001 GAAAAGCAAG TCCGCGACTA CACCGTACTG
GGGCAAAATA CCTACTATCA 3051 GGCGGGAAAA GACGGTTTAT TCGACAACTC
GCAAGGACAA AAAGACCAAA 3101 CTACTGCTAC GTTCCATTTA AAAAATGGTT
CTCGTATTGA GGCCAACCAA 3151 TGGCATGTCC GAGACTACCA CATCGAGACT
TATAAAGAAC GCATCATCGA 3201 AAACCGGCCG GCACACATTA CTGTGGGCGG
TGATTTGACT GCCTCAGGTC 3251 AAAATTGGCT GAACAAAGAC AGCCGGATTG
TAGTAGGCGG GCGTATTATC 3301 ACTGATGATT TAAACCAGAA AGAAATTACC
AATCAAAGTA CAACAGGCAA 3351 AGGTCGCACA GATGCTGTCG GCACACAGTG
GGATTCAGTT ACAAAAAAAG 3401 GATGGTACAG CGGTAGAAAA AGACAACGCC
GTACTGAAAG AAACCATACT 3451 CCTTACCATG ATACCCAACT ATTTACCCAC
GACTTCGACA CGCCTGTATC 3501 CGTCATCCAA CAGAATGCCG CCTCCCCTTC
CTTTCAACCC GCCGCATCTG 3551 CAATCAAACT GATTGACGGA GTATCCACGG
CAGCCGTCAA TGGTCAGCGC 3601 ATCCATACCG GTAATGTGGT CTCGTTAAAT
AACGCTACTG TTACTCTGCC 3651 TAACAGCAGC CTCTATACCA CCCATCCTGA
CAATAAAGGC TGGTTGGTTG 3701 AAACCGATCC TCAATTTGCA GACTACCGCC
GCTGGTTGGG CAGCGACTAC 3751 ATGTTGCAAC AACTGCAATT GGACACCAAT
CATCTACACA AACGGCTTGG 3801 CGACGGCTAC TACGAACAAA AACTTGTTAA
TGAACAAATC CATCAGTTAA 3851 CAGGCTACCG CCGACTCGAC GGCTACAGGA
GTGATGAAGA ACAATTCAAA 3901 GCTCTGATGG ACAACGGCCT TACTGCTGCC
AAAACATTCG GTCTCACCCC 3951 AGGTATCGCC TTGAGTGCAG AGCAAGTTGC
CCGCTTAACT TCAGATATCG 4001 TTTGGATGGA AAATCAAACC GTCACCCTGT
CTGACGGTTC GACTCAAACC 4051 GTACTGGTTC CTAAAGTCTA TGCCCTGGCG
CGCAAAGGTG ATCTCAATAC 4101 CTCCGGTGGC CTGATTAGTG CCGAACAAGT
CTTACTTAAA CTGCAAAACG 4151 GCAACCTGAC TAACAGCGGT ACCATTGCGG
GGCGACAGGC CGTACTCATC 4201 CAGGCACGGA ATATTAACAG CAACGGTAAC
ATTCAAGCCG ACCAAATCGG 4251 CTTAAAAGCT GAAAAAAGTA TCAATATCGA
CGGCGGGCAG GTACAAGCAG 4301 GCAGACTGCT GACTGCCCAA GCGCAAAATA
TCAACCTTAA CGGTACAACC 4351 CAAACTTCCG GTAATGAACG TAACGGCAAT
ACCGCCATCG ATCGTATGGC 4401 CGGCATTAAC GTGGTCGGAA GCCATACTGA
ACAAGTAGAT AACAGAACTT 4451 CAGACGGCAT CCTATCCCTG CATGCCAGCA
ACGATATCAA CCTCAATGCG 4501 GCCACCGTCT CTAACCAAGT TAAAGACGGC
ACTACCCAAA TTACCGCCGG 4551 CAATAATCTC AACCTCGGCA CCATCCGTAC
CGAACATCGC GAAGCCTATG 4601 GTACATTAGA TGACGAGAAC CATCGCCATG
TCCGCCAAAG TACCGAAGTC 4651 GGCAGCAGTA TCCGCACGCA AAACGGCGCA
CTGCTTAGAG CCGGTAACGA 4701 CTTAAAAATC CGCCAAGGCG AACTGGAGGC
CGAAGAAGGC AAAACCGTCC 4751 TTGCCGCAGG ACGTGATGTC ACTATCAGCG
AAGGACGCCA AATAACCGAA 4801 CTGGATACCT CGGTAAGCGG AAAAAGCAAA
GGCATCCTTT CCAGTACCAA 4851 AACACACGAC CGCTACCGCT TCAGTCATGA
TGAAGCAGTC GGCAGCAACA 4901 TCGGCGGCGG CAAAATGATT GTTGCAGCCG
GGCAGGATAT CAATGTACGC 4951 GGCAGCAACC TTATTTCTGA TAAGGGCATT
GTTTTAAAAG CAGGACACGA 5001 CATCGATATT TCTACTGCCC ATAATCGCTA
TACCGGCAAT GAATACCACG 5051 AGAGCAAAAA ATCAGGCGTC ATGGGTACTG
GCGGATTGGG CTTTACTATC 5101 GGTAACCGGA AAACTACCGA TGACACTGAT
CGTACCAATA TTGTCCATAC 5151 AGGCAGCATT ATAGGCAGCC TGAATGGAGA
CACCGTTACA GTTGCAGGAA 5201 ACCGCTACCG ACAAACCGGC AGTACCGTCT
CCAGCCCCGA GGGGCGCAAT 5251 ACCGTCACAG CCAAAAGCAT AGATGTAGAG
TTCGCAAACA ACCGGTATGC 5301 CACTGACTAC GCCCATACCC AGGAACAAAA
AGGCCTTACC GTCGCCCTCA 5351 ATGTCCCGGT TGTCCAAGCT GCACAAAACT
TCATACAAGC AGCCCAAAAT 5401 GTGGGCAAAA GTAAAAATAA ACGCGTTAAT
GCCATGGCTG CAGCCAATGC 5451 TGCATGGCAG AGTTATCAAG CAAAACAACA
AATGCAACAA TTTGCTCCAA 5501 GCAGCAGTGC GGGACAAGGT CAAAACAACA
ATCAAAGCCC CAGTATCAGT 5551 GTGTCCATTA CCTACGGCGA ACAGAAAAGT
CGTAACGAGC AAAAAAGACA 5601 TTACACCGAA GCGGCAGCAA GTCAAATTAT
CGGCAAAGGG CAAACCACAC 5651 TTGCGGCAAC AGGAAGTGGG GAGCAGTCCA
ATATCAATAT TACAGGTTCC 5701 GATGTCATCG GCCATGCAGG TACTGCCCTC
ATTGCCGACA ACCATATCAG 5751 ACTCCAATCT GCCAAACAGG ACGGCAGCGA
GCAAAGCAAA AACAAAAGCA 5801 GTGGTTGGAA TGCAGGCGTA GCCGTCAAAA
TAGGCAACGG CATCAGGTTT 5851 GGAATTACCG CCGGAGGAAA TATCGGTAAA
GGTAAAGAGC AAGGGGGAAG 5901 TACTACCCAC CGCCACACCC ATGTCGGCAG
CACAACCGGC AAAACTACCA 5951 TCCGAAGCGG CGGGGATACC ACCCTCAAAG
GTGTGCAGCT CATCGGCAAA 6001 GGCATACAGG CAGATACGCG CAACCTGCAT
ATAGAAAGTG TTCAAGATAC 6051 TGAAACCTAT CAGAGCAAAC AGCAAAACGG
CAATGTCCAA GTTACTGTCG 6101 GTTACGGATT CAGTGCAAGC GGCAGTTACC
GCCAAAGCAA AGTCAAAGCA 6151 GACCATGCCT CCGTAACCGG GCAAAGCGGT
ATTTATGCCG GAGAAGACGG 6201 CTATCAAATC AAAGTCAGAG ACAACACAGA
CCTCAAGGGC GGTATCATCA
6251 CGTCTAGCCA AAGCGCAGAA GATAAGGGCA AAAACCTTTT TCAGACGGCC 6301
ACCCTTACTG CCAGCGACAT TCAAAACCAC AGCCGCTACG AAGGCAGAAG 6351
CTTCGGCATA GGCGGCAGTT TCGACCTGAA CGGCGGCTGG GACGGCACGG 6401
TTACCGACAA ACAAGGCAGG CCTACCGACA GGATAAGCCC GGCAGCCGGC 6451
TACGGCAGCG ACGGAGACAG CAAAAACAGC ACCACCCGCA GCGGCGTCAA 6501
CACCCACAAC ATACACATCA CCGACGAAGC GGGACAACTT GCCCGAACAG 6551
GCAGGACTGC AAAAGAAACC GAAGCGCGTA TCTACACCGG CATCGACACC 6601
GAAACTGCGG ATCAACACTC AGGCCATCTG AAAAACAGCT TCGACAAAGA 6651
CGCGGTCGCC AAAGAGATCA ACCTGCAAAG GGAAGTAACG AAGGAGTTCG 6701
GCAGAAACGC CGCCCAAGCC GTAGCGGCCG TTGCCGACAA ACTCGGCAAT 6751
ACCCAAAGTT ACGAACGGTA TCAGGAAGCC CGAACCCTGC TGGAGGCCGA 6801
ACTGCAAAAC ACGGACAGCG AAGCCGAAAA AGCCGCCTTC CGCGCATCCC 6851
TCGGCCAAGT AAACGCCTAT CTTGCCGAAA ACCAAAGCCG CTACGACACC 6901
TGGAAAGAAG GCGGCATAGG CAGGAGCATA CTGCACGGGG CGGCAGGCGG 6951
ACTGACGACC GGCAGCCTCG GCGGCATACT GGCCGGCGGC GGCACTTCCC 7001
TTGCCGCACC GTATTTGGAC AAAGCGGCGG AAAACCTCGG TCCGGCGGGC 7051
AAAGCGGCGG TCAACGCACT GGGCGGTGCG GCCATCGGCT ATGCAACTGG 7101
TGGTAGTGGT GGTGCTGTGG TGGGTGCGAA TGTAGATTGG AACAATAGGC 7151
AGCTGCATCC GAAAGAAATG GCGTTGGCCG ACAAATATGC CGAAGCCCTC 7201
AAGCGCGAAG TTGAAAAACG CGAAGGCAGA AAAATCAGCA GCCAAGAAGC 7251
GGCAATGAGA ATCCGCAGGC AGATACTGCG TTGGGTGGAC AAAGGTTCCC 7301
AAGACGGCTA TACCGACCAA AGCGTCATAT CCCTTATCGG AATGAAAGGC 7351
GAAGACAAAG CCTTGGGTTA TACTTGGGAC TACCGCGACT ACGGCGCAAG 7401
AAATCCGCAA ACCTACAACG ATCCGAAGCT GTTTGAGGAA TACCGCCGAC 7451
AGGACAAACC CGAATACCGC AACCTGACCT GGCTGCACAG CGGGACGAAA 7501
GACACCAAAA TCAGGCAGGG AGAGCGGAAA AACGAAGAGT TTGCACTGAA 7551
CGTTGCCGAA GGACTGACGA GCCTTGTCAA CCCCAATCCG AGGATAAAAG 7601
TCCCGATTCT TGCAGGCATC CGCAACCTGA AAAACATCAA GCCGACAGTT 7651
ACCGGCAGCG ATCCCTTATT GGCGGGTGCG GGGAATATCC GTATCCCTGC 7701
AAACGGCAAT GTTGCGAAGG GGGACAGGAT TCCGGATACG GCATTGGCTA 7751
GCAAGGGAAT CAAACATAAA GATCGTAAAG ATCAACTGGA GAAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 1670. ORF
564>:
TABLE-US-02028 m564.pep 1 MNRTLYKVVF NKHRNCMIAV AENAKREGKN
TADTQAVGIL PNDIAGFAGF 51 IHSISVISFS LSLLLGSALI LTSSSATAQG
IVADKSAPAQ QQPTILQTGN 101 GIPQVNIQTP TSAGVSVNQY AQFDVGNRGA
ILNNSRSNTQ TQLGGWIQGN 151 PWLARGEARV VVNQINSSHS SQLNGYIEVG
GRRAEVVIAN PAGIAVNGGG 201 FINASRATLT TAQPQYQAGD LSGFKIRQGN
VVIAGHGLDA RDTDYTRILS 251 YHSKIDAPVW GQDVRVVAGQ NDVAATGDAH
SPILNNAAAN TSNNTANNGT 301 HIPLFAIDTG KLGGMYANKI TLISTVEQAG
IRNQGQWFAS AGNVAVNAEG 351 KLVNTGMIAA TGENHAVSLH ARNVHNSGTV
ASQDDANIHS QTLDNSGTVL 401 SSGRLTVRNL GRLKNQNNGT IQAARLDMST
GGLDNTGNIT QTGSQALDLV 451 SAGKFDNSGK IGVSDVPQTG LNPNPSVIPQ
IPSTATGSGS STVSVSKPGS 501 NNPVSPTAPA KNYAVGRIQT TGAFDNAGSI
NAGGQIDIAA QNGLGNSGSL 551 NAAKLRVSGD SFNNTVKGKL QAHDLAVNTQ
TAKNSGHLLT QTGKIDNREL 601 HNAGEIAANN LTLIHSGRLS NDKKGNIRAA
HLQLDTAGLH NAGNILADSG 651 TVTTKNNLRN TGKVSVARLN TEGQTLDNTR
GRIEAETVNI QSQQLTNQSG 701 HITATEQLTI NSRNVDNQNG KLLSANQAQL
AVSDGLYNQH GEIATNRQLS 751 IHDKNQNTLA LNNADGTIQS AGNVSLQAKS
LANNGTLTAG NKLDIALTDD 801 FVVERDLTAG KQLNLSIKGR LKNTHTLQAG
HTLKLNAGNI DNQVTGKIIG 851 GEQTDITSEQ HVDNRGLINS DGLTHIGAGQ
TLTNTGTGKI YGNHIALDAQ 901 ILLNREETTE GSTKAGAIAA RKRLDIGAKE
IHNQEGALLS SEGIFAVGNR 951 LDEQHHAAGM ADTFVNGSAG LEVQGDALMS
VRNMQNINNH FKTETYLAKA 1001 EKQVRDYTVL GQNTYYQAGK DGLFDNSQGQ
KDQTTATFHL KNGSRIEANQ 1051 WHVRDYHIET YKERIIENRP AHITVGGDLT
ASGQNWLNKD SRIVVGGRII 1101 TDDLNQKEIT NQSTTGKGRT DAVGTQWDSV
TKKGWYSGRK RQRRTERNHT 1151 PYHDTQLFTH DFDTPVSVIQ QNAASPSFQP
AASAIKLIDG VSTAAVNGQR 1201 IHTGNVVSLN NATVTLPNSS LYTTHPDNKG
WLVETDPQFA DYRRWLGSDY 1251 MLQQLQLDTN HLHKRLGDGY YEQKLVNEQI
HQLTGYRRLD GYRSDEEQFK 1301 ALMDNGLTAA KTFGLTPGIA LSAEQVARLT
SDIVWMENQT VTLSDGSTQT 1351 VLVPKVYALA RKGDLNTSGG LISAEQVLLK
LQNGNLTNSG TIAGRQAVLI 1401 QARNINSNGN IQADQIGLKA EKSINIDGGQ
VQAGRLLTAQ AQNINLNGTT 1451 QTSGNERNGN TAIDRMAGIN VVGSHTEQVD
NRTSDGILSL HASNDINLNA 1501 ATVSNQVKDG TTQITAGNNL NLGTIRTEHR
EAYGTLDDEN HRHVRQSTEV 1551 GSSIRTQNGA LLRAGNDLKI RQGELEAEEG
KTVLAAGRDV TISEGRQITE 1601 LDTSVSGKSK GILSSTKTHD RYRFSHDEAV
GSNIGGGKMI VAAGQDINVR 1651 GSNLISDKGI VLKAGHDIDI STAHNRYTGN
EYHESKKSGV MGTGGLGFTI 1701 GNRKTTDDTD RTNIVHTGSI IGSLNGDTVT
VAGNRYRQTG STVSSPEGRN 1751 TVTAKSIDVE FANNRYATDY AHTQEQKGLT
VALNVPVVQA AQNFIQAAQN 1801 VGKSKNKRVN AMAAANAAWQ SYQATQQMQQ
FAPSSSAGQG QNNNQSPSIS 1851 VSITYGEQKS RNEQKRHYTE AAASQIIGKG
QTTLAATGSG EQSNINITGS 1901 DVIGHAGTAL IADNHIRLQS AKQDGSEQSK
NKSSGWNAGV AVKIGNGIRF 1951 GITAGGNIGK GKEQGGSTTH RHTHVGSTTG
KTTIRSGGDT TLKGVQLIGK 2001 GIQADTRNLH IESVQDTETY QSKQQNGNVQ
VTVGYGFSAS GSYRQSKVKA 2051 DHASVTGQSG IYAGEDGYQI KVRDNTDLKG
GIITSSQSAE DKGKNLFQTA 2101 TLTASDIQNH SRYEGRSFGI GGSFDLNGGW
DGTVTDKQGR PTDRISPAAG 2151 YGSDGDSKNS TTRSGVNTHN IHITDEAGQL
ARTGRTAKET EARIYTGIDT 2201 ETADQHSGHL KNSFDKDAVA KEINLQREVT
KEFGRNAAQA VAAVADKLGN 2251 TQSYERYQEA RTLLEAELQN TDSEAEKAAF
RASLGQVNAY LAENQSRYDT 2301 WKEGGIGRSI LHGAAGGLTT GSLGGILAGG
GTSLAAPYLD KAAENLGPAG 2351 KAAVNALGGA AIGYATGGSG GAVVGANVDW
NNRQLHPKEM ALADKYAEAL 2401 KREVEKREGR KISSQEAAMR IRRQILRWVD
KGSQDGYTDQ SVISLIGMKG 2451 EDKALGYTWD YRDYGARNPQ TYNDPKLFEE
YRRQDKPEYR NLTWLHSGTK 2501 DTKIRQGERK NEEFALNVAE GLTSLVNPNP
RIKVPILAGI RNLKNIKPTV 2551 TGSDPLLAGA GNIRIPANGN VAKGDRIPDT
ALASKGIKHK DRKDQLEKK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02029 m564/fha ID FHAB_BORPE STANDARD; PRT; 3591 AA. AC
P12255; DT 01-OCT-1989 (REL. 12, CREATED) DT 01-FEB-1996 (REL. 33,
LAST SEQUENCE UPDATE) DT 01-FEB-1996 (REL. 33, LAST ANNOTATION
UPDATE) DE FILAMENTOUS HEMAGGLUTININ.... SCORES Init1: 190 Initn:
524 Opt: 594 Smith-Waterman score: 866; 21.7% identity in 2427 aa
overlap 10 20 30 40 50 60 m564.pep
MNRTLYKVVFNKHRNCMIAVAENAKREGKNTADTQAVGILPNDIAGFAGFIHSISVISFS ||
:||::||:: |: :: |:|: | || :: | : :| : |:: ::: fhab_borpe
MNTNLYRLVFSHVRGMLVPVSEHCTV-G-NTFCGRTRG---QARSGARATSLSVAPNALA 10 20
30 40 50 70 80 90 100 110 119 m564.pep
LSLLLG-SALILTSSSATAQGIVADKSAPAQQQPTILQTGNGIPQVNIQTPTSAGVSVNQ :|:|:
::| |:: |||:| | | | :|| || :| ||| |:|:||| |: fhab_borpe
WALMLACTGLPLVTH---AQGLV-----P-QGQTQVLQGGNKVPVVNIADPNSGGVSHNK 60 70
80 90 100 120 130 140 150 160 170 179 m564.pep
YAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLARGEARVVVNQINSSHSSQLNGYIEV :
||:|:| |:::||: :: :::|| : || |:| :| ::: ::::: |:| | :|| fhab_borpe
FQQFNVANPGVVFNNGLTDGVSRIGGALTKNPNLTR-QASAILAEVTDTSPSRLAGTLEV 110
120 130 140 150 160 180 190 200 210 220 230 239 m564.pep
GGRRAEVVIANPAGIAVNGGGFINASRATLTTAQPQYQAGDLSGFKIRQGNVVIAGHGLD |:
|:::|||| ||:||| : :||| ||||::|: ::| : |: ::||:|:| |:: fhab_borpe
YGKGADLIIANPNGISVNGLSTLNASNLTLTTGRPSVNGGRI-GLDVQQGTVTIERGGVN 170
180 190 200 210 220 240 250 260 270 280 290 m564.pep
ARDTDYTRILSYHSKIDAPV---WGQ---DVRVVAGQNDVAATGDAHSPILNNAAANTSN | |
::: |::: | |: |: |||| | : :|| ||:: : fhab_borpe
ATGLGYFDVVARLVKLQGAVSSKQGKPLADIAVVAGANRYDHATRRATPI----AAGARG 230
240 250 260 270 280 300 310 320 330 340 350 m564.pep
NTANNGTHIPLFAIDTGKLGGMYANKITLISTVEQAGIRNQGQWFASAGNVAVNAEGKLV :|:
:||| |:||:::|||:|: |:|: |: ::| : ::|:::|::: fhab_borpe
AAAGA------YAIDGTAAGAMYGKHITLVSSDSGLGVRQLGS-LSSPSAITVSSQGEIA 290
300 310 320 330 360 370 380 390 400 410 m564.pep
NTGMIAATGENHAVSLHARNVHNSGTVASQDDANIHSQTLDNSGTVLSSGRLTVRNLGRL : || :
:||:: :| ::| :|| | :: ::|:| : :: ::| | fhab_borpe
---LGDATVQRGPLSLKGAGVVSAGKLASGGGAV----NVAGGGAVKIA---SASSVGNL 340
350 360 370 380 420 430 440 450 460 470 m564.pep
KNQNNGTIQAARLDMSTGGLDNTGNITQTGSQALDLVSAGKFDNSGKIGVSDVPQTGLNP |::|
:||: |: : |:: :| ||::| :|:: : : : : : |: fhab_borpe
AVQGGGKVQATLLNAG-------GTLLVSGRQAVQLGAASSRQALSVNAGGALKADKLSA 390
400 410 420 430 480 490 500 510 520 530 m564.pep
NPSV-IPQIPSTATGSGSSTVSVSKPGSNNPVSPTAPAKNYAVGRIQTTGAFD-NAGSIN : | :
::| ||:||:: : |: :| |:||::: | : ||: fhab_borpe
TRRVDVDGKQAVALGSASSNALSVRAGGA-----LKAGKLSATGRLDVDGKQAVTLGSVA 440
450 460 470 480 490 540 550 55 560 570 579 m564.pep
AGGQIDIAAQNGLGNSGSLNAAKLRVSG------DSFNNT------VKGKLQAHDLAVNT : |
::::| ::| : :::|:|:| | |: ::: : | | |::| : fhab_borpe
SDGALSVSAGGNLRANELVSSAQLEVRGQREVALDDASSARGMTVVAAGALAARNLQSKG 500
510 520 530 540 550 580 590 600 610 620 630 m564.pep
QTAKNSGHLLTQTGKIDNRELH--NAGEIAANNLTLIHSGRLSNDKKGNIRAAHLQLDTA : ::|:
:: :: :: ||: : |:: ::|: ::: :|:: : || |: : |: fhab_borpe
AIGVQGGEAVSVANANSDAELRVRGRGQVDLHDLSAARGADISGEGRVNIGRARSDSDVK 560
570 580 590 600 610 640 650 660 670 680 690 m564.pep
GLHNAGNILADSGTVTTKNNLRNTGKVSVARLNTEGQTLDNTRGRIEAETVNIQSQQLTN : | :
|| |: ::: |:||: : ::| : : | :||: : | fhab_borpe
-VSAHGALSIDSMTALGAIGVQAGGSVSAKDMRSRGAVTVSGGG-----AVNLGDVQ--- 620
630 640 650 660 700 710 720 730 740 750 m564.pep
QSGHITATEQLTINSRNVDNQNGKLLSANQAQLAVSDGLYNQHGEIATNRQLSIHDKNQN ::|::
|| ::: |:| | |:||:: | | | : : :::: :: fhab_borpe
SDGQVRATSAGAMTVRDV---------AAAADLALQAGDALQAGFLKSAGAMTVNGRDAV 670
680 690 700 710 760 770 780 790 800 810 m564.pep
TLALNNADGTIQSAGNVSLQAKSLANNGTLTAGNKLDIALTDDFVVERDLTAGKQL-NLS | ||:
:::|:: ::: : | |:|:| ::| :: : :| :| |:| |:| fhab_borpe
RL-----DGA-HAGGQLRVSSDGQAALGSLAAKGELTVSAARAATVA-EL---KSLDNIS 720
730 740 750 760 820 830 840 850 860 870 m564.pep
IKGRLK-NTHTLQAGHTLKLNA-GNIDNQVTGKIIGGEQTDITSEQHVDNRGLINSDGLT : | :
:::::::: : ::| | :| :||: : :: | | : | :::|:| fhab_borpe
VTGGERVSVQSVNSASRVAISAHGALD---VGKV--SAKSGIGLE----GWGAVGADSL- 770
780 790 800 810 880 890 900 910 920 930 m564.pep
HIGAGQTLTNTGTGKIYGNHIALDAQILLNREETTEGSTKAGAIAARKRLDI-GAKEIHN |: :::
:| : :: |:| |: :||:: ||: | :|: |:: : fhab_borpe
--GSDGAISVSGRDAVRVDQARSLADISLG----AEGGATLGAVEAAGSIDVRGGSTV-- 820
830 840 850 860 940 950 960 970 980 990 m564.pep
QEGALLSSEGIFAVGNRLDEQHHAAGMADTFVNGSAGLEVQGDALMSVRNMQNINNHFKT ::|
::: : : |: | : :|: : :: |:| ::: |::: |: ::: : fhab_borpe
AANSLHANRDVRVSGK--DAVRVTAATSGGGLHVSSGRQLDLGAVQA-RGALALDGGAGV 870
880 890 900 910 920 1000 1010 1020 1030 1040 1050 m564.pep
ETYLAKAEK--QVRDYTVLGQNTYYQAGKDGLFDNSQGQKDQTTATFHLKNGSRIEANQ- |||
:|: | :| :| : :| | :| : |: ::|:: fhab_borpe
ALQSAKASGTLHVQGGEHLDLGTLAAVGAVDV----NGTGDVRVAKLVSDAGADLQAGRS 930
940 950 960 970 1060 1070 1080 1090 1100 m564.pep
--WHVRDYHIETYKERIIENRPAHITVGGDLTASGQNWLNKDSRIVVGGRIITDDLNQKE : | :
: : : : : | | |:: : |: : |:|: :: :| fhab_borpe
MTLGIVDTTGDLQARAQQKLELGSVKSDGGLQAAAGGALSLAAAEVAGALELS---GQGV 980
990 1000 1010 1020 1030 1110 1120 1130 1140 1150 1160 m564.pep
ITNQSTTGKGRTDAVGTQWDSVTKKGWY--SGRKRQRRTERNHTPYHDTQLFTHDFDTPV
:::::::::| |::|: :: | | :: :| ||: | :|| || fhab_borpe
TVDRASASRARIDSTGSVGIGALKAGAVEAASPRRARRALR------------QDFFTPG 1040
1050 1060 1070 1080 1170 1180 1190 1200 1210 1220 m564.pep
SVI---QQNAASPSFQPAASAIKLIDGVSTAAVNGQRIHTGNVVSLNNATVTLPNSSLYT ||: |
|:: :| ::: | : | :| : | : :|:|||: :| fhab_borpe
SVVVRAQGNVTVGRGDPHQGVLAQGDIIMDA--KGGTLLLRNDALTENGTVTISADSAVL 1090
1100 1110 1120 1130 1140 1230 1240 1250 1260 1270 1280 m564.pep
THPDNKGWLVETD-PQFADYRRWLGSDYMLQQLQLDTNHLHKRLGDGYYEQKLVNEQIHQ | :: :
:: :| : | : ::| | | : ::|: :: : ::|| fhab_borpe
EHSTIESKISQSVLAAKGDKGKPAVSVKVAKKLFL--NGTLRAVNDN--NETMSGRQIDV 1150
1160 1170 1180 1190 1290 1300 1310 1320 1330 1340 m564.pep
LTGYRRLDGYRSDEEQFKALMDNGLTAAKTFGLTPG-IALSAEQVARLTSDIVWMENQTV : | ::
:| :| |::::: :: | |:: | ::: :: | :|: fhab_borpe
VDGRPQI----TDAVTGEARKDESVVSDAALVADGGPIVVEAGELVSHAGGIGNGRNK-- 1200
1210 1220 1230 1240 1250 1350 1360 1370 1380 1390 1400 m564.pep
TLSDGSTQTVLVPKVYALARKGDLNTSGGLISAEQVLLKLQNGNLTNSGTIAGRQAVLIQ :|::
|| : |:| ::| : :::| :|:: :| ||| ::: : |: fhab_borpe
--ENGASVTVRTT--------GNLVNKGYISAGKQGVLEV-GGALTNEFLVGSDGTQRIE 1260
1270 1280 1290 1300 1410 1420 1430 1440 1450 m564.pep
ARNINSNGNIQ-------ADQIGLKAEKSINIDGGQVQAGRLLTAQ----AQNINLNGTT |: |::
|::| | : :|| ::| || :: |:: | : ::: :: : fhab_borpe
AQRIENRGTFQSQAPAGTAGALVVKAAEAIVHDGVMATKGEMQIAGKGGGSPTVTAGAKA 1310
1320 1330 1340 1350 1360 1460 1470 1480 1490 1500 m564.pep
QTSGNERNGNTAI-DRMAGINVV-GSHTEQVDNRTSD-GILSLHASNDINLNAATVSNQV ||:|:
: ::| | ::::: |: | :| :: | :|:::: :: :| ::: || fhab_borpe
TTSANKLSVDVASWDNAGSLDIKKGGAQVTVAGRYAEHGEVSIQGDYTVSADAIALAAQV 1370
1380 1390 1400 1410 1420 1510 1520 1530 1540 1550 m564.pep
--KDGTTQITAGNNLNLGT-IRTE---HREAYGTLDDENHRHVRQST---------EVGS :
|::::|: :: ::: || : :| | ::: :: :||::: |:|: fhab_borpe
TQRGGAANLTSRHDTRFSNKIRLMGPLQVNAGGPVSNTGNLKVREGVTVTAASFDNETGA 1430
1440 1450 1460 1470 1480 1560 1570 1580 1590 1600 m564.pep
SIRTQNGALLRAGNDLKIRQGELEAEEGKTVLAAGRDV--TISEGRQITELDTS---VSG :
:::::| :| : |:::::|: |::||: : |:: |::|| : : | fhab_borpe
EVMAKSATLTTSGAARN--AGKMQVKEAATIVAASVSNPGTFTAGKDITVISRGGFDNEG 1490
1500 1510 1520 1530 1610 1620 1630 1640 1650 1660 m564.pep
K---SKGILSSTKTHDRYRF---SHDEAV-GSNIGGGKMIVAAGQDINVRGSNLISDKGI | :|
|: :|: : | :|| :| :|: : :: : ||:|::|::: : |:: fhab_borpe
KMESNKDIVIKTEQFSNGRVLDAKHDLTVTASGQADNRGSLKAGHDFTVQAQRI--DNSG 1540
1550 1560 1570 1580 1590 1670 16 1680 1690 1700 1710 m564.pep
VLKAGHDIDISTAHNRYTG-----NEYHESKKSGVMGTGGLGFTIGNRKTTDDTDRTNIV ::
|||| ::: | | || :: | ::: : :|| : | : | :| || fhab_borpe
TMAAGHDATLKAPHLRNTGQVVAGHDIHIINSAKLENTGRV--DARNDIALDVADFTN-- 1600
1610 1620 1630 1640 1650 1720 1730 1 1740 1750 1760 1770 m564.pep
HTGSIIGSLNGDTVTVAGNRYRQT----GSTVSSPEGRNTVTAKSIDVEFANNRYATDYA |||: :
:: |:|:| : |: : || | |||: :|: :: :: | fhab_borpe
-TGSLYAEHDA-TLTLAQGTQRDLVVDQDHILPVAEGTLRVKAKSLTTEIETGNPGSLIA 1660
1670 1680 1690 1700 1710 1780 1790 1800 1810 1820 1830 m564.pep
HTQEQKGLTVALNVPVVQAAQNFIQAAQNVGKSKNKRVNAMAAANAA-WQSYQATQQMQQ ::||
|: || | ::::: | : : |: ||| | : : | : |: fhab_borpe
EVQE--------NIDNKQA----IVVGKDLTLS-SAHGNVANEANALLWAAGELTVKAQN 1720
1730 1740 1750 1840 1850 1860 1870 1880 1890 m564.pep
FAPSSSAGQGQNNNQSPSISVSITYGEQKSRNEQKRHYTEAAASQIIGKGQTTLAATGSG :: :
:| ::| : :|:: : | : | | :| ::| :| fhab_borpe
ITNKRAALIEAGGNARLTAAVALLNKLGRIRAGEDMHLD---APRI----ENTAKLSGEV 1760
1770 1780 1790 1800 1810 1900 1910 1920 1930 1940 1950 m564.pep
EQSNINITGSDVIGHAGTALIADNHIRLQSAKQDGSEQSKNKSSGWNAGVAVKIGNGIRF ::::::
:|: |: : :: :| ::|: |: :: | :| : : |: fhab_borpe
QRKGVQDVGGGEHGRWSGIGYVNYWLRAGNGKKAGT-----IAAPWYGGDLTAEQSLIEV 1820
1830 1840 1850 1860 1960 1970 1980 1990 2000 2010 m564.pep
GITAGGNIGKGKEQGGSTTHRHTHVGSTTGKTTIRSGGDTTLKGVQLIGKGIQADTRNLH | | |
|:: ||| :: :|::|| : | ::|:|:: fhab_borpe
GKDLYLNAGARKDE-----HRHL-----LNEGVIQAGGHGHIGG--------DVDNRSV- 1870
1880 1890 1900 2020 2030 2040 2050 2060 m564.pep
IESVQDTETYQSKQQNGNVQVTVGYGFSASGSYRQSKVKA-----DHASVTGQSGIYAGE :::|:
| ::: : : : |:| : || : |: |:| fhab_borpe
VRTVSAMEYFKTPLPVSLTALDNRAGLSPATWNFQSTYELLDYLLDQNRYEYIWGLYPTY 1910
1920 1930 1940 1950 1960 2070 2080 2090 2100 2110 2120 m564.pep
DGYQIKVRDNTDLKGGIITSSQSAEDKGKNLFQTATLTASDIQNHS--RYEGRSFGIGGS :::::
| || | : :| | |:::|: |||:: :| fhab_borpe
TEWSVNTLKNLDL-GYQAKPAPTAPPMPKA-------PELDLRGHTLESAEGRKI-FGEY 1970
1980 1990 2000 2010 2130 2140 2150 2160 2170 m564.pep
FDLNGGWDGT-----VTDKQGRPTDRISPAAGYGSDGDSKNSTTRSGVNTHNIHITDEAG |:| ::
: ::: |: | |: | :: : : :|::::: :: fhab_borpe
KKLQGEYEKAKMAVQAVEAYGEATRRVHDQLG------QRYGKALGGMDAETKEVDGIIQ 2020
2030 2040 2050 2060 2070 2180 2190 2200 2210 2220 2230 m564.pep
QLARTGRTAKETEARIYTGIDTETADQHSGHLKNSFDKDAVAKEINLQREVTKEFGRNAA ::|
||: :| | ||:|| |: : : |:::| || : :|| ::: : fhab_borpe
EFAADLRTVYAKQADQAT-IDAET-DKVAQRYKSQID--AVRLQADQPGRVT--LAKALS 2080
2090 2100 2110 2120 2240 2250 2260 2270 2280 2290 m564.pep
QAVAAVADKLGNTQSYERYQEARTLLE-AELQNTDSEAEKAAFRASLGQVNAYL------ |::|
||::| ::|::: :: : ||: :| | |:| |: : fhab_borpe
AALGADWRALGHSQLMQRWKDFKAGKRGAELAFYPKEQTVLAAGAGLTLSNGAIHNGENA 2130
2140 2150 2160 2170 2180
2300 2310 2320 2330 2340 2350 m564.pep
AENQSRYDTWKEGGIGRSILHGAAGGLTTGSLGGILAGGGTSLAAPYLDKAAENLGPAGK |:|::|
: | |: : : : |: :| fhab_borpe
AQNRGRPEGLKIGAHSATSVSGSFDALRDVGLEKRLDIDDALAAVLVNPHIFTRIGAAQT 2190
2200 2210 2220 2230 2240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1671>:
TABLE-US-02030 g565.seq 1 atggacagca cattgtctaa aacgtgttgc
gtttcgtgca tattgttgag 51 cgtaaccacc accattttcg cccgtcccag
accggcggct tccaatactt 101 ccctgcgttt cgcatcgccg aacgacaccg
gctcgcctgc acttctggct 151 acctgcacgc gtgcgatgtc caagtcgagc
gcgaaatacg gaatatcctc 201 tttgggcgaa gacgcgtccg accgtctgcc
cgcccctgcc gaagccgaca 251 atcagcacat gatcagactt gctcatcgct
tccaccaaca tgctgtgcag 301 atcgagcgac ttcatgtccc agcttga
This corresponds to the amino acid sequence <SEQ ID 1672; ORF
565.ng>:
TABLE-US-02031 g565.pep 1 MDSTLSKTCC VSCILLSVTT TIFARPRPAA
SNTSLRFASP NDTGSPALLA 51 TCTRAMSKSS AKYGISSLGE DASDRLPAPA
EADNQHMIRL AHRFHQHAVQ 101 IERLHVPA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1673>:
TABLE-US-02032 m565.seq 1 ATGGACAGCA CATTGTCTAA AACGTGTTGC
GTTTCGTGCA TATTGTTGAG 51 CGTAACCACC ACCATTTTCG CCCGTCCCAG
ACCGGCGGCT TCCAATACTT 101 CCCTGCGTTT CGCATCGCCG AACGACACCG
GTTCGCCCGC ACTTCTGGCA 151 ACCTGCACCC GCGCAATGTC CAAGTCGAGC
GCGAAATACG GAATATCCTC 201 TTGGGCAAGG ACGCGTCCGA CCGTCTGCCC
GCCCCTGCCG AAGCCGACAA 251 TCAGCACATG GTCGGACTTG CTCATGGTTT
CTACCAGCAT ACTGTGCAGA 301 TCGAGCGACT TCATGTCCCA GCTTGACTTG
ACCAAACGCC CGACCAGCGC 351 ATCGCTGCCG CCCAAGAGGA AGGGCGCGAT
AATCATCGAC AGCAGAACCG 401 CCGCCGTCGC CGCCTGTTCC CATTCTGGCG
AAACCATATC AAGCTGCCCG 451 GCAATGGCCA GCATCACGAA GCCGAACTCG
CCGCCCTGCG CGAGATACAA 501 AGCCGTTTTG AGGCTGTCGC CGACCGAATG
TTTCATTTTG AAGGCAATGG 551 CAAACACAAC CAGTGCCTTC AACACCAGCA
GCATTGCCAA CAGCATCAAT 601 ACCTGCCGCC AGCCGCCGAT CAATGCCTGA
This corresponds to the amino acid sequence <SEQ ID 1674; ORF
565>:
TABLE-US-02033 m565.pep 1 MDSTLSKTCC VSCILLSVTT TIFARPRPAA
SNTSLRFASP NDTGSPALLA 51 TCTRAMSKSS AKYGISSWAR TRPTVCPPLP
KPTISTWSDL LMVSTSILCR 101 SSDFMSQLDL TKRPTSASLP PKRKGAIIID
SRTAAVAACS HSGETISSCP 151 AMASITKPNS PPCARYKAVL RLSPTECFIL
KAMANTTSAF NTSSIANSIN 201 TCRQPPINA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02034 m565/g565 100.0% identity in 67 aa overlap 10 20 30
40 50 60 m565.pep
MDSTLSKTCCVSCILLSVTTTIFARPRPAASNTSLRFASPNDTGSPALLATCTRAMSKSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g565
MDSTLSKTCCVSCILLSVTTTIFARPRPAASNTSLRFASPNDTGSPALLATCTRAMSKSS 10 20
30 40 50 60 70 80 90 100 110 120 m565.pep
AKYGISSWARTRPTVCPPLPKPTISTWSDLLMVSTSILCRSSDFMSQLDLTKRPTSASLP
||||||| g565 AKYGISSLGEDASDRLPAPAEADNQHMIRLAHRFHQHAVQIERLHVPAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1675>:
TABLE-US-02035 a565.seq 1 ATGGACAGCA CATTGTCTAA AACGTGTTGC
GTTTCGTGCA TATTGTTGAG 51 CGTAACCACC ACCATTTTCG CCCGTCCCAG
ACCGGCGGCT TCCAATACTT 101 CCCTGCGTTT CGCATCGCCG AACGACACCG
GTTCGCCCGC ACTTCTGGCA 151 ACCTGCACCC GCGCAATGTC CAAGTCGAGC
GCGAAATACG GAATATCCTC 201 TTGGGCAAGG ACGCGTCCGA CCGTCTGCCC
GCCCCTGCCG AAGCCGACAA 251 TCAGCACATG GTCGGACTTG CTCATGGTTT
CTACCAGCAT ACTGTGCAGA 301 TCGAGCGACT TCATGTCCCA GCTTGACTTG
ACCAAACGCC CGACCAGTGC 351 ATCGCTGCCG CCCAAGAGGA AGGGCGCGAT
AATCATCGAC AGCAGAACCG 401 CCGCCGTCGC CGCCTGTTCC CATTCTAGCG
AAACCATATC AAGCTGCCCG 451 GCAATGGCCA GCATCACGAA GCCGAACTCG
CCGCCCTGCG CGAGATACAA 501 AGCCGTTTTG AGGCTGTCGC CGACCGAATG
TTTCATTTTG AAGGCAATGG 551 CAAACACAAC CAGTGCCTTC AACACCAGCA
GCATTGCCAA CAGCATCAAT 601 ACCTGCCGCC AGCCGCCGAT TAATGCCTGA
This corresponds to the amino acid sequence <SEQ ID 1676; ORF
565.a>:
TABLE-US-02036 a565.pep 1 MDSTLSKTCC VSCILLSVTT TIFARPRPAA
SNTSLRFASP NDTGSPALLA 51 TCTRAMSKSS AKYGISSWAR TRPTVCPPLP
KPTISTWSDL LMVSTSILCR 101 SSDFMSQLDL TKRPTSASLP PKRKGAIIID
SRTAAVAACS HSSETISSCP 151 AMASITKPNS PPCARYKAVL RLSPTECFIL
KAMANTTSAF NTSSIANSIN 201 TCRQPPINA* m565/a565 99.5% identity in
209 aa overlap 10 20 30 40 50 60 m565.pep
MDSTLSKTCCVSCILLSVTTTIFARPRPAASNTSLRFASPNDTGSPALLATCTRAMSKSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a565
MDSTLSKTCCVSCILLSVTTTIFARPRPAASNTSLRFASPNDTGSPALLATCTRAMSKSS 10 20
30 40 50 60 70 80 90 100 110 120 m565.pep
AKYGISSWARTRPTVCPPLPKPTISTWSDLLMVSTSILCRSSDFMSQLDLTKRPTSASLP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a565
AKYGISSWARTRPTVCPPLPKPTISTWSDLLMVSTSILCRSSDFMSQLDLTKRPTSASLP 70 80
90 100 110 120 130 140 150 160 170 180 m565.pep
PKRKGAIIIDSRTAAVAACSHSGETISSCPAMASITKPNSPPCARYKAVLRLSPTECFIL
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| a565
PKRKGAIIIDSRTAAVAACSHSSETISSCPAMASITKPNSPPCARYKAVLRLSPTECFIL 130
140 150 160 170 180 190 200 210 m565.pep
KAMANTTSAFNTSSIANSINTCRQPPINAX |||||||||||||||||||||||||||||| a565
KAMANTTSAFNTSSIANSINTCRQPPINAX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1677>:
TABLE-US-02037 g566.seq.. 1 atgccgtctg aacaatatct tttcagacgg
cattttgtat gggggttaac 51 ggttgttcag cccgagtacg tcctgcatat
cgtacaaacc cgttttgccg 101 tttacccaaa ctgcggcgcg gacggcaccg
gcggcaaagg tcatgcggct 151 gccggctttg tgggtgattt ccacgcgttc
gccgtcggtg gcgaagaggg 201 cggtgtggtc gccgactatg tcgcctgcgc
ggacggtggc aaagccgatg 251 gtggaaggat cgcgcggacc agtgtggcct
tcgcggccgt aaacggcgca 301 ttgtttgagg tcgcggccga gcgcgccggc
gatgacttcg cccattcgta 351 a
This corresponds to the amino acid sequence <SEQ ID 1678; ORF
566.ng>:
TABLE-US-02038 g566.pep.. 1 MPSEQYLFRR HFVWGLTVVQ PEYVLHIVQT
RFAVYPNCGA DGTGGKGHAA 51 AGFVGDFHAF AVGGEEGGVV ADYVACADGG
KADGGRIART SVAFAAVNGA 101 LFEVAAERAG DDFAHS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1679>:
TABLE-US-02039 m566.seq.. 1 ATGCCGTCTG AACAATATCT TTTCAGACGG
CATTTTGTAT GGGGGTTAAC 51 GGTTGTTCAG CCCGAGTACG TCCTGCATAT
CGTACAAACC CGTTTTGCCG 101 TTGACCCAAA CTGCGGCGCG GACGGCACCG
GCGGCAAAGG TCATGCGGCT 151 GCTGGCCTTG TGGGTGATTT CCACGCGCTC
GCCGTCGGTG GCGAAGAGGG 201 CGGTGTGGTC GCCGACGATG TCGCCTGCGC
GGACGGTGGC AAAGCCGATG 251 GTCGACGGAT CGCGCGGACC GGTGTGGCCT
TCGCGGCCGT AAACGGCGCA 301 TTGTTTGAGG TCTCTGCCGA GCGCGCCGGC
GATGACTTCG CCCATGCGTA 351 A
This corresponds to the amino acid sequence <SEQ ID 1680; ORF
566>:
TABLE-US-02040 m566.pep.. 1 MPSEQYLFRR HFVWGLTVVQ PEYVLHIVQT
RFAVDPNCGA DGTGGKGHAA 51 AGLVGDFHAL AVGGEEGGVV ADDVACADGG
KADGRRIART GVAFAAVNGA 101 LFEVSAERAG DDFAHA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02041 m566/g566 93.1% identity in 116 aa overlap 10 20 30
40 50 60 m566.pep
MPSEQYLFRRHFVWGLTVVQPEYVLHIVQTRFAVDPNCGADGTGGKGHAAAGLVGDFHAL
|||||||||||||||||||||||||||||||||| |||||||||||||||||:||||||: g566
MPSEQYLFRRHFVWGLTVVQPEYVLHIVQTRFAVYPNCGADGTGGKGHAAAGFVGDFHAF 10 20
30 40 50 60 70 80 90 100 110 m566.pep
AVGGEEGGVVADDVACADGGKADGRRIARTGVAFAAVNGALFEVSAERAGDDFAHAX
|||||||||||| ||||||||||| |||||:|||||||||||||:||||||||||:| g566
AVGGEEGGVVADYVACADGGKADGGRIARTSVAFAAVNGALFEVAAERAGDDFAHSX 70 80 90
100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1681>:
TABLE-US-02042 a566.seq 1 ATGCCGTCTG AACAATATCT TTTCAGACGG
CATTTTGTAT GGGGGTTAAC 51 GGTTGTTCAG CCCGAGTACG TCCTGCATAT
CGTACAAACC CGTTTTACCG 101 TTTACCCAAA CTGCGGCGCG GACGGCGCCG
GCGGCAAAGG TCATGCGGCT 151 GCTTGCCTTG TGGGTGATTT CCACGCGCTC
GCCGTCGGTG GCGAAGAGGG 201 CGGTGTGGTC GCCGACGATG TCGCCCGCGC
GGACGGTGGC AAAGCCGATG 251 GTGGACGGAT CGCGCGGGCC GGTGTGGCCT
TCGCGGCCGT AAACGGCGCA 301 TTGTTTGAGG TCTCTGCCGA GCGCGCCGGC
GATGACTTCG CCCATGCGTA 351 A
This corresponds to the amino acid sequence <SEQ ID 1682; ORF
566.a>:
TABLE-US-02043 a566.pep 1 MPSEQYLFRR HFVWGLTVVQ PEYVLHIVQT
RFTVYPNCGA DGAGGKGHAA 51 ACLVGDFHAL AVGGEEGGVV ADDVARADGG
KADGGRIARA GVAFAAVNGA 101 LFEVSAERAG DDFAHA* m566/a566 94.0%
identity in 116 aa overlap 10 20 30 40 50 60 m566.pep
MPSEQYLFRRHFVWGLTVVQPEYVLHIVQTRFAVDPNCGADGTGGKGHAAAGLVGDFHAL
||||||||||||||||||||||||||||||||:| |||||||:|||||||| |||||||| a566
MPSEQYLFRRHFVWGLTVVQPEYVLHIVQTRFTVYPNCGADGAGGKGHAAACLVGDFHAL 10 20
30 40 50 60 70 80 90 100 110 m566.pep
AVGGEEGGVVADDVACADGGKADGRRIARTGVAFAAVNGALFEVSAERAGDDFAHAX
||||||||||||||| |||||||| ||||:||||||||||||||||||||||||||| a566
AVGGEEGGVVADDVARADGGKADGGRIARAGVAFAAVNGALFEVSAERAGDDFAHAX 70 80 90
100 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1683>:
TABLE-US-02044 g567.seq.. 1 atgcgacgac gggcagcggc atcgacaagg
cgggtttgca gtccggcgtt 51 tatcaggtct tattgggcga tgcggacgtg
cagtcggcgg cggtacgcag 101 caaagagggc ggatacggcg tgttgggtgc
gaacgcgcgc gcttgccggc 151 gcggaaatcg agctggtgca ggaaatcgcc
cgggaagtgc gtttgaaaaa 201 cgcgctcaag gcagtggcgg aagattacga
ctttatcctg atcgactgtc 251 cgccttcgct gacgctgttg acgcttaacg
gcttggtggc ggcgggcggc 301 gtgattgtgc cgatgttgtg cgaatattac
gcgctggaag ggatttccga 351 tttgattgcg accgtgcgca aaatccgtca
ggcggtcaat cccgatttgg 401 acatcacggg catcgtgcgt acgatgtacg
acagccgcag caggctggtt 451 gccgaagtca gcgaacagtt gcgcagccat
ttcggggatt tgctttttga 501 aaccgccatc ccgcgcaata tccgccttgc
ggaagcgccg agccacggta 551 tgccggtgat ggcttacgac gcgcaggcaa
agggtgccaa ggcgtatctt 601 gccttggcgg acgaactggc ggcgagggtg
tcggggaaat ag
This corresponds to the amino acid sequence <SEQ ID 1684; ORF
567.ng>:
TABLE-US-02045 g567.pep 1 MRRRAAASTR RVCSPAFIRS YWAMRTCSRR
RYAAKRADTA CWVRTRALAG 51 AEIELVQEIA REVRLKNALK AVAEDYDFIL
IDCPPSLTLL TLNGLVAAGG 101 VIVPMLCEYY ALEGISDLIA TVRKIRQAVN
PDLDITGIVR TMYDSRSRLV 151 AEVSEQLRSH FGDLLFETAI PRNIRLAEAP
SHGMPVMAYD AQAKGAKAYL 201 ALADELAARV SGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1685>:
TABLE-US-02046 m567.seq.. 1 ATGAGTGCGA ACATCCTTGC CATCGCCAAT
CAGAAGGGCG GTGTGGGCAA 51 AACGACGACG ACGGTAAATT TGGCGGCTTC
GCTGGCATCG CGCGGCAAAC 101 GCGTGCTGGT GGTCGATTTG GATCCGCAGG
GCAATGCGAC GACGGGCAGC 151 GGCATCGACA AGGCGGGTTT GCAGTCCGGC
GTTTATCAGG TCTTATTGGG 201 CGATGCGGAC GTGCAGTCGG CGGCGGTACG
CAGCAAAGAG GGCGGATACG 251 CTGTGTTGGG TGCGAACCGC GCGCTGGCCG
GCGCGGAAAT CGAACTGGTG 301 CAGGAAATCG CCCGGGAAGT GCGTTTGAAA
AACGCGCTCA AGGCAGTGGA 351 AGAAGATTAC GACTTTATCC TGATCGACTG
CCCGCCTTCG CTGACGCTGT 401 TGACGCTTAA CGGGCTGGTG GCGGCGGGCG
GCGTGATTGT GCCGATGTTG 451 TGCGAATATT ACGCGCTGGA AGGGATTTCC
GATTTGATTG CGACCGTGCG 501 CAAAATCCGT CAGGCGGTCA ATCCCGATTT
GGACATCACG GGCATCGTGC 551 GCACGATGTA CGACAGCCGC AGCAGGCTGG
TTGCCGAAGT CAGCGAACAG 601 TTGCGCAGCC ATTTCGGGGA TTTGCTTTTT
GAAACCGTCA TCCCGCGCAA 651 TATCCGCCTT GCGGAAGCGC CGAGCCACGG
TATGCCGGTG ATGGCTTACG 701 ACGCGCAGGC AAAGGGTACC AAGGCGTATC
TTGCCTTGGC GGACGAGCTG 751 GCGGCGAGGG TGTCGGGGAA ATAG
This corresponds to the amino acid sequence <SEQ ID 1686; ORF
567>:
TABLE-US-02047 m567.pep.. 1 MSANILAIAN QKGGVGKTTT TVNLAASLAS
RGKRVLVVDL DPQGNATTGS 51 GIDKAGLQSG VYQVLLGDAD VQSAAVRSKE
GGYAVLGANR ALAGAEIELV 101 QEIAREVRLK NALKAVEEDY DFILIDCPPS
LTLLTLNGLV AAGGVIVPML 151 CEYYALEGIS DLIATVRKIR QAVNPDLDIT
GIVRTMYDSR SRLVAEVSEQ 201 LRSHFGDLLF ETVIPRNIRL AEAPSHGMPV
MAYDAQAKGT KAYLALADEL 251 AARVSGK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02048 m567/g567 98.2% identity in 168 aa overlap 60 70 80
90 100 110 119 m567.pep
GVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVEED
||||||||||||||||||||||||||| || g567
AFIRSYWAMRTCSRRRYAAKRADTACWVRTRALAGAEIELVQEIAREVRLKNALKAVAED 20 30
40 50 60 70 120 130 140 150 160 170 179 m567.pep
YDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g567
YDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDI 80 90
100 110 120 130 180 190 200 210 220 230 239 m567.pep
TGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKG
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| g567
TGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNIRLAEAPSHGMPVMAYDAQAKG 140
150 160 170 180 190 240 250 m567.pep TKAYLALADELAARVSGKX
:||||||||||||||||||| g567 AKAYLALADELAARVSGKX 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1687>:
TABLE-US-02049 a567.seq 1 ATGAGTGCGA ACATCCTTGC CATCGCCAAT
CAGAAGGGCG GTGTGGGCAA 51 AACGACGACG ACGGTAAATT TGGCGGCTTC
GCTGGCATCG CGCGGCAAAC 101 GCGTGCTGGT GGTCGATTTG GATCCGCAGG
GCAATGCGAC GACGGGCAGC 151 GGCATCGACA AGGCGAGTTT GCAGTCCGGC
GTTTATCAGG TCTTATTGGG 201 CGATGCGGAC GTGAAATCGG CGGCGGTACG
CAGCAAAGAG GGCGGATACG 251 GCGTGTTGGG TGCGAACCGC GCGCTGGCCG
GCGCGGAAAT CGAGCTGGTG 301 CAGGAAATCG CCCGGGAAGT GCGTTTGAAA
AACGCGCTCA AGGCAGTGGC 351 GGAAGATTAC GACTTTATCC TGATCGACTG
CCCGCCTTCG CTGACGCTGT 401 TGACGCTTAA CGGCTTGGTG GCGGCAGGCG
GCGTGATTGT GCCGATGTTG 451 TGCGAATATT ACGCGCTGGA AGGGATTTCC
GATTTGATTG CGACCGTGCG 501 CAAAATCCGT CAGGCGGTCA ATCCCGATTT
GGATATCACG GGCATCGTGC 551 GTACGATGTA CGACAGCCGC AGCAGGCTAG
TTGCCGAAGT CAGCGAACAG 601 TTGCGCAGCC ATTTCGGGGA TTTGCTGTTT
GAAACCGTCA TCCCGCGCAA 651 TATCCGCCTT GCGGAAGCGC CGAGCCACGG
TATGCCGGTG ATGGCTTATG 701 ATGCGCAGGC AAAGGGTGCC AAGGCGTATC
TTGCCTTGGC GGACGAGCTG 751 ATGGCGAGGG TGTCGGGGAA ATAG
This corresponds to the amino acid sequence <SEQ ID 1688; ORF
567.a>:
TABLE-US-02050 a567.pep 1 MSANILAIAN QKGGVGKTTT TVNLAASLAS
RGKRVLVVDL DPQGNATTGS 51 GIDKASLQSG VYQVLLGDAD VKSAAVRSKE
GGYGVLGANR ALAGAEIELV 101 QEIAREVRLK NALKAVAEDY DFILIDCPPS
LTLLTLNGLV AAGGVIVPML 151 CEYYALEGIS DLIATVRKIR QAVNPDLDIT
GIVRTMYDSR SRLVAEVSEQ 201 LRSHFGDLLF ETVIPRNIRL AEAPSHGMPV
MAYDAQAKGA KAYLALADEL 251 MARVSGK* m567/a567 97.7% identity in 257
aa overlap 10 20 30 40 50 60 m567.pep
MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKAGLQSG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a567
MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQGNATTGSGIDKASLQSG 10 20
30 40 50 60 70 80 90 100 110 120 m567.pep
VYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQEIAREVRLKNALKAVEEDY
|||||||||||:|||||||||||:|||||||||||||||||||||||||||||||| ||| a567
VYQVLLGDADVKSAAVRSKEGGYGVLGANRALAGAEIELVQEIAREVRLKNALKAVAEDY 70 80
90 100 110 120 130 140 150 160 170 180 m567.pep
DFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a567
DFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGISDLIATVRKIRQAVNPDLDIT 130
140 150 160 170 180 190 200 210 220 230 240 m567.pep
GIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a567
GIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNIRLAEAPSHGMPVMAYDAQAKGA 190
200 210 220 230 240 250 m567.pep KAYLALADELAARVSGKX ||||||||||
||||||| a567 KAYLALADEL MARVSGKX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1689>:
TABLE-US-02051 g568.seq 1 atgctcaggg tcagaccggt attatttgcc
gtcaaggctt ccgcctcttc 51 gataccttgc agaatctgcc gattaaagcg
ttcgcggctg cccaatattt 101 tcaggcgcat attgttttcg tgcaggcggc
gtacctgttt ttgcaaagcc 151 tgtaaaaaca gccccatcag gaacgaaact
tcgtcttcgg ggcgacgcca 201 gttttcggtt gaaaaggcaa acacggtcag
atattgcacg cccagtttgg 251 cgcaatgctt caccatattt tccaacgcgt
ccaagccgcg tttgtgtccc 301 attatacgcg ggagaaaacg ttttttcgcc
caacggccgt tgccgtccat 351 aattacggcg atgtgcctcg ggatggcggt
gtgttccaaa atggtctgcg 401 tgctgctctt catatctgcc tttcgcggtt
cggcgttcaa atgccgtctg 451 aacgccgcgc cgtga
This corresponds to the amino acid sequence <SEQ ID 1690; ORF
568.ng>:
TABLE-US-02052 g568.pep 1 MLRVRPVLFA VKASASSIPC RICRLKRSRL
PNIFRRILFS CRRRTCFCKA 51 CKNSPIRNET SSSGRRQFSV EKANTVRYCT
PSLAQCFTIF SNASKPRLCP 101 IIRGRKRFFA QRPLPSIITA MCLGMAVCSK
MVCVLLFISA FRGSAFKCRL 151 NAAP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1691>:
TABLE-US-02053 m568.seq 1 ATGCTCAGGG TCAGGCCGGT ATTGTTTGCC
GTCAACGCTT CCGCCTCTTC 51 GATGCCTTGC AGAATCTGCC GGTTGAAGCG
TTCGCGGCTG CCCAATATCT 101 TCAGGCGCAT ATTGTTTTCG TGCAGGCGGC
GTACCTGTTT TTGCAAAGCC 151 TGTAAAAACA GCCCCATCAG GAACGAAACT
TCGTCTTCGG GGCGGCGCCA 201 GTTTTCGGTT GAAAAGGCAA ACACGGTCAG
ATATTGCACA CCCAGTTTGG 251 CGCAATGCTT CACCATATTT TCCAATGCGT
CCAAACCGCG TTTGTGTCCC 301 ATTATGCGCG GGAGGAAACG TTTTTTCGCC
CAACGGCCGT TGCCGTCCAT 351 AATCACGGCG ATATGCTTGG GAATGGCGGT
GTGTTCCAAA ACGGCCTGCG 401 TGCTGCTTTT CATGTCTGCC TTTCGCGGTT
CGGCATTCAA ATGCCGTCTG 451 AACGCCGAAC CGTGCAGGTT AAATTGCCAT
CAAATCTTCT TCTTTGGCAG 501 TCAGGAGTTT GTCGGCTTCG GTAATGTATT
TGTCGGTCAG TTTTTGAACC 551 GCTTCTTCGC CGCGACGTGC CTCGTCTTCG
GAAATTTCTT TGTCTTTGAG 601 GAGTTTTTTG ATGTGGTCGT TGGCATCGCG
GCGCACGTTG CGGATAGAGA 651 CGCGGCCTTC TTCCGCTTCG CCGCGTACGA
CTTTAATCAG GTCTTTGCGG 701 CGTTCCTCGG TCAGCATGGG CATCGGCACG
CGGATCAGGT CGCCGACAGC 751 TGCCGGGTTC AGTCCCAAGT TTGA
This corresponds to the amino acid sequence <SEQ ID 1692; ORF
568>:
TABLE-US-02054 m568.pep.. 1 MLRVRPVLFA VNASASSMPC RICRLKRSRL
PNIFRRILFS CRRRTCFCKA 51 CKNSPIRNET SSSGRRQFSV EKANTVRYCT
PSLAQCFTIF SNASKPRLCP 101 IMRGRKRFFA QRPLPSIITA ICLGMAVCSK
TACVLLFMSA FRGSAFKCRL 151 NAEPCRLNCH QIFFFGSQEF VGFGNVFVGQ
FLNRFFAATC LVFGNFFVFE 201 EFFDVVVGIA AHVADRDAAF FRFAAYDFNQ
VFAAFLGQHG HRHADQVADS 251 CRVQSQV*
Computer analysis of this amino acid sequence gave the following
results:
TABLE-US-02055 m568/g568 94.8% identity in 154 aa overlap 10 20 30
40 50 60 m568.pep
MLRVRPVLFAVNASASSMPCRICRLKRSRLPNIFRRILFSCRRRTCFCKACKNSPIRNET
|||||||||||:|||||:|||||||||||||||||||||||||||||||||||||||||| g568
MLRVRPVLFAVKASASSIPCRICRLKRSRLPNIFRRILFSCRRRTCFCKACKNSPIRNET 10 20
30 40 50 60 70 80 90 100 110 120 m568.pep
SSSGRRQFSVEKANTVRYCTPSLAQCFTIFSNASKPRLCPIMRGRKRFFAQRPLPSIITA
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| g568
SSSGRRQFSVEKANTVRYCTPSLAQCFTIFSNASKPRLCPIIRGRKRFFAQRPLPSIITA 70 80
90 100 110 120 130 140 150 160 170 180 m568.pep
ICLGMAVCSKTACVLLFMSAFRGSAFKCRLNAEPCRLNCHQIFFFGSQEFVGFGNVFVGQ
:||||||||| :|||||:|||||||||||||| | g568
MCLGMAVCSKMVCVLLFISAFRGSAFKCRLNAAPX 130 140 150 190 200 210 220 230
240 m568.pep
FLNRFFAATCLVFGNFFVFEEFFDVVVGIAAHVADRDAAFFRFAAYDFNQVFAAFLGQHG
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1693>:
TABLE-US-02056 a568.seq 1 ATGCTCAGGG TCAGGCCGGT ATTGTTTGCC
GTCAAGGCTT CCGCCTCTTC 51 GATGCCCTTC AGGATTTGAC GGTTGAAGCG
TTCGCGGCTG CCCAGTATTT 101 TCAGGCGCAT ATTGTTTTCG TGCAGGCGGC
GTACCTGTTT TTGCAAAGCC 151 TGTAAAAACA GCCCCATCAG GAACGAAACT
TCGTCTTCGG GGCGGCGCCA 201 GTTTTCGGTT GAAAAGGCAA ACACGGTCAG
ATATTGCACA CCCAGTTTGG 251 CGCAATGCTT CACCATATTT TCCAATGCGT
CCAAACCGCG TTTGTGTCCC 301 ATTATGCGCG GGAGGAAACG TTTTTTCGCC
CAACGGCCGT TGCCGTCCAT 351 AATCACGGCG ATATGCTTGG GAATGGCGGT
GTGTTCCAAA ACGGCCTGCG 401 TGCTGCTTTT CATGTCTGCC TTTCGCGGTT
CGGCATTCAA ATGCCGTCTG 451 AACGCCGAAC CGTGCAGGTT AAATTGCCAT
CAAATCTTCT TCTTTGGCAG 501 TCAGGAGTTT GTCGGCTTCG GTAATGTATT
TGTCGGTCAG TTTTTGAACC 551 GCTTCTTCGC CGCGACGTGC CTCGTCTTCG
GAAATTTCTT TGTCTTTGAG 601 GAGTTTTTTG ATGTGGTCGT TGGCATCGCG
GCGCACGTTG CGGATGGAGA 651 CGCGGCCTTC TTCCGCTTCG CCGCGTACGA
CTTTAATCAG GTCTTTGCGG 701 CGTTCCTCGG TCAGCATGGG CATCGGCACG
CGGATCAGGT CGCCGACAGC 751 TGCCGGGTTC AGTCCCAAGT TTGA
This corresponds to the amino acid sequence <SEQ ID 1694; ORF
568.a>:
TABLE-US-02057 a568.pep 1 MLRVRPVLFA VKASASSMPF RI*RLKRSRL
PSIFRRILFS CRRRTCFCKA 51 CKNSPIRNET SSSGRRQFSV EKANTVRYCT
PSLAQCFTIF SNASKPRLCP 101 IMRGRKRFFA QRPLPSIITA ICLGMAVCSK
TACVLLFMSA FRGSAFKCRL 151 NAEPCRLNCH QIFFFGSQEF VGFGNVFVGQ
FLNRFFAATC LVFGNFFVFE 201 EFFDVVVGIA AHVADGDAAF FRFAAYDFNQ
VFAAFLGQHG HRHADQVADS 251 CRVQSQV* m568/a568 98.1% identity in 257
aa overlap 10 20 30 40 50 60 m568.pep
MLRVRPVLFAVNASASSMPCRICRLKRSRLPNIFRRILFSCRRRTCFCKACKNSPIRNET
|||||||||||:||||||| || ||||||||:|||||||||||||||||||||||||||| a568
MLRVRPVLFAVKASASSMPFRIXRLKRSRLPSIFRRILFSCRRRTCFCKACKNSPIRNET 10 20
30 40 50 60 70 80 90 100 110 120 m568.pep
SSSGRRQFSVEKANTVRYCTPSLAQCFTIFSNASKPRLCPIMRGRKRFFAQRPLPSIITA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a568
SSSGRRQFSVEKANTVRYCTPSLAQCFTIFSNASKPRLCPIMRGRKRFFAQRPLPSIITA 70 80
90 100 110 120 130 140 150 160 170 180 m568.pep
ICLGMAVCSKTACVLLFMSAFRGSAFKCRLNAEPCRLNCHQIFFFGSQEFVGFGNVFVGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a568
ICLGMAVCSKTACVLLFMSAFRGSAFKCRLNAEPCRLNCHQIFFFGSQEFVGFGNVFVGQ 130
140 150 160 170 180 190 200 210 220 230 240 m568.pep
FLNRFFAATCLVFGNFFVFEEFFDVVVGIAAHVADRDAAFFRFAAYDFNQVFAAFLGQHG
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| a568
FLNRFFAATCLVFGNFFVFEEFFDVVVGIAAHVADGDAAFFRFAAYDFNQVFAAFLGQHG 190
200 210 220 230 240 250 m568.pep HRHADQVADSCRVQSQVX
|||||||||||||||||| a568 HRHADQVADSCRVQSQVX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1695>:
TABLE-US-02058 g569.seq.. 1 atgctgaaac aacgggtaat aaccgctatg
tggctgctgc cgctgatgct 51 gggcatgctg ttttacgcgc cgcaatggct
gtgggctgca ttttgcgggc 101 tgattgccct gaccgccttg tgggagtatg
cccgtatggc cggtttgtgc 151 aaaaccgaaa ccaaccatta cctcgccgca
accttggttt tcggcgtagt 201 tgcctatgcg ggcggctgga tgctgcctaa
tttggtttgg tatgttgttt 251 tggcattttg gctcgccgtt atgcctttgt
ggttgagatt caaatggagg 301 ctcaacggcg gttggcaggt ttatgccgtc
ggctggcttt tgctcatgcc 351 gttttggttc gcgctcgtat ccctggcgcc
cgcatcccga tga
This corresponds to the amino acid sequence <SEQ ID 1696; ORF
569.ng>:
TABLE-US-02059 g569.pep 1 MLKQRVITAM WLLPLMLGML FYAPQWLWAA
FCGLIALTAL WEYARMAGLC 51 KTETNHYLAA TLVFGVVAYA GGWMLPNLVW
YVVLAFWLAV MPLWLRFKWR 101 LNGGWQVYAV GWLLLMPFWF ALVSLAPASR *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1697>:
TABLE-US-02060 m569.seq.. 1 ATGCTGAAAC AACGGGTAAT AACCGCCATG
TGGCTGCTGC CGCTGATGCT 51 GGGCATGCTG TTTTACGCGC CGCAATGGTT
GTGGGCTGCA TTTTGCGGAC 101 TGATTGCCCT GATTGCCTTG TGGGAATATG
CCCGTATGGG CGGTTTGTGC 151 AAAATTAAAA CCAACCATTA CCTCGCCGCA
ACCTTGGTTT TCGGCGTGGT 201 TGCCTATGCG GGCGGCTGGA TGCTGCCTAA
TTTGGTTTGG TATGTTGTTT 251 TGGCATTTTG GCTCGCCGTT ATGCCTTTAT
GGTTGAGATT CAAATGGAGG 301 CTCAACGGCG GTTGGCAGGT TTATGCCGTC
GGCTGGCTTC TGGTCATGCC 351 GTTTTGGTTC GCGCTCGTAT CCCTGCGCCC
GCATCCCGAT GATGCCCTGC 401 CGCTGCTCGC CGTGATGGGT TTGGTGTGGG
TTGCCGATAT TTGCGCGTAT 451 TTCAGCGGCA AGGCGTTCGG CAAACACAAA
ATCGCGCCGG CAATCAGCCC 501 CGGCAAAAGC TGGGAAGGTG CAATCGGCGG
CGCGGTTTGC GTGGCAGTGT 551 ACATGACCGC CGTACGAAGT GCCGGCTGGC
TGGCATTCGA TACAGGCTGG 601 TTCGATACCG TGTTAATCGG TTTGGTGCTG
ACCGTTGTCA GCGTATGCGG 651 CGACCTTTTG GAAAGCTGGC TCAAGCGCGC
GGCAGGCATC AAAGACAGCA 701 GCAAGCTGCT GCCCGGACAC GGCGGCGTGT
TCGACCGTAC CGACAGCCTG 751 ATTGCCGTTA TCAGCGTCTA TGCAGCGATG
ATGTCGGTTT TAAATTGA
This corresponds to the amino acid sequence <SEQ ID 1698; ORF
569>:
TABLE-US-02061 m569.pep.. 1 MLKQRVITAM WLLPLMLGML FYAPQWLWAA
FCGLIALIAL WEYARMGGLC 51 KIKTNHYLAA TLVFGVVAYA GGWMLPNLVW
YVVLAFWLAV MPLWLRFKWR 101 LNGGWQVYAV GWLLVMPFWF ALVSLRPHPD
DALPLLAVMG LVWVADICAY 151 FSGKAFGKHK IAPAISPGKS WEGAIGGAVC
VAVYMTAVRS AGWLAFDTGW 201 FDTVLIGLVL TVVSVCGDLL ESWLKRAAGI
KDSSKLLPGH GGVFDRTDSL 251 IAVISVYAAM MSVLN* m569/g569 95.3%
identity in 127 aa overlap 10 20 30 40 50 60 m569.pep
MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYARMGGLCKIKTNHYLAA
||||||||||||||||||||||||||||||||||||| ||||||||:|||| :||||||| g569
MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALTALWEYARMAGLCKTETNHYLAA 10 20
30 40 50 60 70 80 90 100 110 120 m569.pep
TLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLNGGWQVYAVGWLLVMPFWF
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| g569
TLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLNGGWQVYAVGWLLLMPFWF 70 80
90 100 110 120 130 140 150 160 170 180 m569.pep
ALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHKIAPAISPGKSWEGAIGGAVC |||||
| g569 ALVSLAPASRX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1699>:
TABLE-US-02062 a569.seq 1 ATGCTGAAAC AACGGGTGAT AACCGCCATG
TGGCTGCTGC CGCTGATGCT 51 GGGCATGCTG TTTTACGCGC CGCAATGGTT
GTGGGCTGCA TTTTGCGGAC 101 TGATTGCCCT GATTGCCTTG TGGGAATATG
CCCGTATGGG CGGTTTGTGC 151 AAAATTAAAA CCAACCATTA CCTCGCCGCA
ACCTTGGTTT TCGGCGTGGT 201 TGCCTATGCG GGCGGCTGGA TGCTGCCTAA
TTTGGTTTGG TATGTTGTTT 251 TGGCATTTTG GCTCGCCGTT ATGCCTTTAT
GGTTGAGATT CAAATGGAGG 301 CTCAACGGCG GTTGGCAGGT TTATGCCGTC
GGCTGGCTTC TGGTCATGCC 351 GTTTTGGTTC GCGCTCGTAT CCCTGCGCCC
GCATCCCGAT GATGCCCTGC 401 CGCTGCTCGC CGTGATGGGT TTGGTGTGGG
TTGCCGATAT TTGCGCGTAT 451 TTCAGCGGCA AGGCGTTCGG CAAACACAAA
ATCGCACCGG CAATCAGCCC 501 CGGCAAAAGC TGGGAAGGTG CAATCGGCGG
CGCGGTTTGC GTGGCCGTGT 551 ACATGACCGC CGTACGAAGT GCCGGCTGGC
TGGCATTCGA TACAGGCTGG 601 TTCGATACCG TGTTAATCGG TTTGGTGTTG
ACCGTTGTCA GCGTATGCGG 651 CGACCTTTTG GAAAGCTGGC TCAAGCGCGC
GGCAGGCATC AAAGACAGCA 701 GCAACCTGCT GCCCGGACAC GGCGGCGTGT
TCGACCGCAC CGACAGCCTG 751 ATTGCCGTTA TCAGCGTCTA TGCAGCGATG
ATGTCGGTTT TAAATTGA
This corresponds to the amino acid sequence <SEQ ID 1700; ORF
569.a>:
TABLE-US-02063 a569.pep 1 MLKQRVITAM WLLPLMLGML FYAPQWLWAA
FCGLIALIAL WEYARMGGLC 51 KIKTNHYLAA TLVFGVVAYA GGWMLPNLVW
YVVLAFWLAV MPLWLRFKWR 101 LNGGWQVYAV GWLLVMPFWF ALVSLRPHPD
DALPLLAVMG LVWVADICAY 151 FSGKAFGKHK IAPAISPGKS WEGAIGGAVC
VAVYMTAVRS AGWLAFDTGW 201 FDTVLIGLVL TVVSVCGDLL ESWLKRAAGI
KDSSNLLPGH GGVFDRTDSL 251 IAVISVYAAM MSVLN* m569/a569 99.6%
identity in 265 aa overlap 10 20 30 40 50 60 m569.pep
MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYARMGGLCKIKTNHYLAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a569
MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYARMGGLCKIKTNHYLAA 10 20
30 40 50 60 70 80 90 100 110 120 m569.pep
TLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLNGGWQVYAVGWLLVMPFWF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a569
TLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLNGGWQVYAVGWLLVMPFWF 70 80
90 100 110 120 130 140 150 160 170 180 m569.pep
ALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHKIAPAISPGKSWEGAIGGAVC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a569
ALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHKIAPAISPGKSWEGAIGGAVC 130
140 150 160 170 180 190 200 210 220 230 240 m569.pep
VAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGDLLESWLKRAAGIKDSSKLLPGH
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a569
VAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGDLLESWLKRAAGIKDSSNLLPGH 190
200 210 220 230 240 250 260 m569.pep GGVFDRTDSLIAVISVYAAMMSVLNX
|||||||||||||||||||||||||| a569 GGVFDRTDSLIAVISVYAAMMSVLNX 250
260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1701>:
TABLE-US-02064 g570.seq.. 1 atgatccgtt tgacccgcgc gtttgccgcc
gccctgatcg gtttatgctg 51 caccacaggc gcgcacgccg acaccttcca
aaaaatcggc tttatcaaca 101 ccgagcgcat ctacctcgaa tccaagcagg
cgcgcaacat ccaaaaaacg 151 ctggacggcg aattttccgc ccgtcaggac
gaattgcaaa aactgcaacg 201 cgaaggcttg gatttggaaa ggcagctcgc
cggcggcaaa cttaaggacg 251 caaaaaaggc gcaagccgaa gaaaaatggc
gcgggctggt cgaagcgttc 301 cgcaaaaaac aggcgcagtt tgaagaagac
tacaacctcc gccgcaacga 351 agagtttgcc tccctccagc aaaacgccaa
ccgcgtcatc gtcaaaatcg 401 ccaaacagga aggttacgat gtcattttgc
aggacgtgat ttacgtcaac 451 acccaatacg acgttaccga cagcgtcatt
aaagaaatga acgcccgctg 501 a
This corresponds to the amino acid sequence <SEQ ID 1702; ORF
570.ng>:
TABLE-US-02065 g570.pep.. 1 MIRLTRAFAA ALIGLCCTTG AHADTFQKIG
FINTERIYLE SKQARNIQKT 51 LDGEFSARQD ELQKLQREGL DLERQLAGGK
LKDAKKAQAE EKWRGLVEAF 101 RKKQAQFEED YNLRRNEEFA SLQQNANRVI
VKIAKQEGYD VILQDVIYVN 151 TQYDVTDSVI KEMNAR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1703>:
TABLE-US-02066 m570.seq.. 1 ATGACCCGTT TGACCCGCGC GTTTGCCGCG
GCTCTGATCG GTTTGTGCTG 51 CACCGCAGGC GCGCACGCCG ACACCTTCCA
AAAAATCGGC TTTATCAACA 101 CCGAGCGCAT CTACCTCGAA TCCAAGCAGG
CGCGCAAGAT TCAAAAAACG 151 CTGGACAGCG AATTTTCCGC TCGTCAGGAC
GAATTGCAAA AACTGCAACG 201 CGAAGGTCTG GATTTGGAAA GGCAGCTTGC
CGAAGGCAAA CTCAGAAACG 251 CAAAAAAGGC GCAAGCCGAA GAAAAATGGC
GCGGGCTGGT CGCAGCGTTC 301 CGCAAAAAAC AGGCGCAGTT TGAAGAAGAC
TACAACCTCC GCCGCAACGA 351 AGAGTTTGCC TCCCTCCAGC AAAACGCCAA
CCGCGTCATC GTCAAAATCG 401 CCAAACAGGA AGGTTACGAT GTCATTTTGC
AGAACGTGAT TTACGTCAAC 451 ACCCAATACG ACGTTACCGA CAGCGTCATT
AAAGAAATGA ACGCCCGCTG 501 A
This corresponds to the amino acid sequence <SEQ ID 1704; ORF
570>:
TABLE-US-02067 m570.pep 1 MTRLTRAFAA ALIGLCCTAG AHADTFQKIG
FINTERIYLE SKQARKIQKT 51 LDSEFSARQD ELQKLQREGL DLERQLAEGK
LRNAKKAQAE EKWRGLVAAF 101 RKKQAQFEED YNLRRNEEFA SLQQNANRVI
VKIAKQEGYD VILQNVIYVN 151 TQYDVTDSVI KEMNAR* m570/g570 94.6%
identity in 166 aa overlap 10 20 30 40 50 60 m570.pep
MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQD |
||||||||||||||||:||||||||||||||||||||||||||:||||||:||||||| g570
MIRLTRAFAAALIGLCCTTGAHADTFQKIGFINTERIYLESKQARNIQKTLDGEFSARQD 10 20
30 40 50 60 70 80 90 100 110 120 m570.pep
ELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFA
||||||||||||||||| |||::||||||||||||| ||||||||||||||||||||||| g570
ELQKLQREGLDLERQLAGGKLKDAKKAQAEEKWRGLVEAFRKKQAQFEEDYNLRRNEEFA 70 80
90 100 110 120 130 140 150 160 m570.pep
SLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVIKEMNARX
||||||||||||||||||||||||:|||||||||||||||||||||| g570
SLQQNANRVIVKIAKQEGYDVILQDVIYVNTQYDVTDSVIKEMNARX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1705>:
TABLE-US-02068 a570.seq 1 ATGACCCGTT TGACCCGCGC GTTTGCCGCG
GCTCTGATCG GTTTGTGCTG 51 CACCGCAGGC GCGCACGCCG ACACCTTCCA
AAAAATCGGC TTTATCAACA 101 CCGAGCGCAT CTACCTCGAA TCCAAGCAGG
CGCGCAAGAT TCAAAAAACG 151 CTGGACAGCG AATTTTCCGC CCGCCAGGAC
GAATTGCAAA AACTGCAACG 201 CGAAGGTCTG GATTTGGAAA GGCAGCTTGC
CGAAGGCAAA CTCAAAGACG 251 CAAAAAAGGC GCAAGCCGAA GAAAAATGGT
GCGGGCTGGT CGCAGCGTTC 301 CGCAAAAAAC AGGCGCAGTT TGAAGAAGAC
TACAACCTCC GCCGCAACGA 351 AGAGTTTGCC TCCCTCCAGC AAAACGCCAA
CCGCGTCATC GTCAAAATCG 401 CCAAACAGGA AGGTTACGAT GTCATTTTGC
AGGACGTGAT TTACGTCAAC 451 ACCCAATACG ACGTTACCGA CAGCGTCATT
AAAGAAATGA ACGCCCGCTG 501 A
This corresponds to the amino acid sequence <SEQ ID 1706; ORF
570.a>:
TABLE-US-02069 a570.pep 1 MTRLTRAFAA ALIGLCCTAG AHADTFQKIG
FINTERIYLE SKQARKIQKT 51 LDSEFSARQD ELQKLQREGL DLERQLAEGK
LKDAKKAQAE EKWCGLVAAF 101 RKKQAQFEED YNLRRNEEFA SLQQNANRVI
VKIAKQEGYD VILQDVIYVN 151 TQYDVTDSVI KEMNAR* m570/a570 97.6%
identity in 166 aa overlap 10 20 30 40 50 60 m570.pep
MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a570
MIRLTRAFAAALIGLCCIAGAHADTFQKIGFINTERIYLESKQARKIQKTLDSEFSARQD 10 20
30 40 50 60 70 80 90 100 110 120 m570.pep
ELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRKKQAQFEEDYNLRRNEEFA
|||||||||||||||||||||::|||||||||| |||||||||||||||||||||||||| a570
ELQKLQREGLDLERQLAEGKLKDAKKAQAEEKWCGLVAAFRKKQAQFEEDYNLRRNEEFA 70 80
90 100 110 120 130 140 150 160 m570.pep
SLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVIKEMNARX
||||||||||||||||||||||||:|||||||||||||||||||||| a570
SLQQNANRVIVKIAKQEGYDVILQDVIYVNTQYDVTDSVIKEMNARX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1707>:
TABLE-US-02070 g571.seq (partial) 1 atgcgcgttt tccgagtaaa
ccgatttgtt gttaccgttt tcggcggcgg 51 tataggttct gccgtcccac
acgctgcctg cgtcggcaaa caggctcagg 101 cggacggtgc gtgcgtcttt
cgcaccgggc atcgggaaga gcagctcggc 151 ggagacgttg gcttttttgt
tgccgccgta gctgattttt tcgccgtatt 201 cgtcatacac tttcgggccg
agcgtgccgc tttcgtagcc gcgcaccgaa 251 cccaggccgc cgccgtagaa
gttttcaaag aaggggattt ctttggttct 301 gccgtagccg cccgcaatgc
cgacttcgcc gccgagcatc agcgtgaagg 351 ttttgct...
This corresponds to the amino acid sequence <SEQ ID 1708; ORF
571.ng>:
TABLE-US-02071 g571.pep (partial) 1 MRVFRVNRFV VTVFGGGIGS
AVPHAACVGK QAQADGACVF RTGHREEQLG 51 GDVGFFVAAV ADFFAVFVIH
FRAERAAFVA AHRTQAAAVE VFKEGDFFGS 101 AVAARNADFA AEHQREGFA...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1709>:
TABLE-US-02072 m571.seq 1 ATGGGTATTG CCGGCGCCGT AAATGTTTTG
AACCCTGCCG CCGGTCGCGG 51 AACTGCTGTT GTCGTCGTAG GTTTTGCCGT
CCCACACGCT GCCTGCGTCG 101 GCAAACAGGC TCAGGCGGAC GGTGCGCGCG
TCTTTCGCGC CGGGCATCGG 151 GAAGAGCAGC TCGGCGGAGA CGTTGGCTTT
TTTGTTGCCG CCGTAGCTGA 201 TTTTTTCGCC GTATTCGTCA TAGACTTTCG
GACCGAGCGT GCCGCTTTCG 251 TATCCGCGCA CCGAACCCAG GCCGCCGCCG
TAGAAGTTTT CAAAGAAGGG 301 GATTTCTTTG GTTCTGCCGT AGCCGCCCGC
AATGCCGACT TCGCCGCCGA 351 GCATCAGCGT GAAGGTTTTG CTCAGGGGGA
AGAACCAGGT TTGGTTGTGG 401 GTGGCGGAGT AGTATTGCAG TTTGCTGCCA
GGCAGGGCGA TTTCGGCGTT 451 CACGCCCGTC AGGTAGCCGC GCGTCGGCCA TAA
This corresponds to the amino acid sequence <SEQ ID 1710; ORF
571>:
TABLE-US-02073 m571.pep 1 MGIAGAVNVL NPAAGRGTAV VVVGFAVPHA
ACVGKQAQAD GARVFRAGHR 51 EEQLGGDVGF FVAAVADFFA VFVIDFRTER
AAFVSAHRTQ AAAVEVFKEG 101 DFFGSAVAAR NADFAAEHQR EGFAQGEEPG
LVVGGGVVLQ FAARQGDFGV 151 HARQVAARRP * m571/g571 93.1% identity in
102 aa overlap 10 20 30 40 50 60 m571.pep
MGIAGAVNVLNPAAGRGTAVVVVGFAVPHAACVGKQAQADGARVFRAGHREEQLGGDVGF :|
||||||||||||||||| g571
MRVFRVNRFVVTVFGGGIGSAVPHAACVGKQAQADGACVFRTGHREEQLGGDVGF 10 20 30 40
50 70 80 90 100 110 120 m571.pep
FVAAVADFFAVFVIDFRTERAAFVSAHRTQAAAVEVFKEGDFFGSAVAARNADFAAEHQR
|||||||||||||| ||:||||||:||||||||||||||||||||||||||||||||||| g571
FVAAVADFFAVFVIHFRAERAAFVAAHRTQAAAVEVFKEGDFFGSAVAARNADFAAEHQR 60 70
80 90 100 110 130 140 150 160 m571.pep
EGFAQGEEPGLVVGGGVVLQFAARQGDFGVHARQVAARRPX |||| g571 EGFA 119
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1711>:
TABLE-US-02074 a571.seq 1 ATGGGTATTG CCGGCGCCGT AAATGTTTTG
AACCCTGCCG CCGGTCGCGG 51 AACTGCTGTT GTCGTCGTAG GTTTTGCCGT
CCCACACGCT GCCTGCGTCG 101 GCAAACAGGC TCAGGCGGAC GGTGCGCGCG
TCTTTCGCGC CGGGCATCGG 151 GAAGAGCAGC TCGGCGGAGA CGTTGGCTTT
TTTGTTGCCG CCGTAGCTGA 201 TTTTTTCGCC GTATTCGTCA TACACTTTCG
GACCGAGCGT GCCGCTTTCG 251 TATCCGCGCA CCGAACCCAG GCCGCCGCCG
TAGAAGTTTT CAAAGAAGGG 301 GATTTCTTTG GTTCTGCCGT AGCCGCCCGC
AATGCCGACT TCGCCGCCGA 351 GCATCAGCGT GAAGGTTTTG CTTAAGGGGA
AGAACCAGGT TTGGTTGTGG 401 GTGGCGGAGT AGTATTGCAG TTTGCTGCCG
GGCAGGGCGA TTTCGGCGTT 451 CACGCCCGTC AGGTAGCCGC GCGTCGGCCA TAA
This corresponds to the amino acid sequence <SEQ ID 1712; ORF
571.a>:
TABLE-US-02075 a571.pep 1 MGIAGAVNVL NPAAGRGTAV VVVGFAVPHA
ACVGKQAQAD GARVFRAGHR 51 EEQLGGDVGF FVAAVADFFA VFVIHFRTER
AAFVSAHRTQ AAAVEVFKEG 101 DFFGSAVAAR NADFAAEHQR EGFA*GEEPG
LVVGGGVVLQ FAAGQGDFGV 151 HARQVAARRP * m571/a571 98.1% identity in
160 aa overlap 10 20 30 40 50 60 m571.pep
MGIAGAVNVLNPAAGRGTAVVVVGFAVPHAACVGKQAQADGARVFRAGHREEQLGGDVGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a571
MGIAGAVNVLNPAAGRGTAVVVVGFAVPHAACVGKQAQADGARVFRAGHREEQLGGDVGF 10 20
30 40 50 60 70 80 90 100 110 120 m571.pep
FVAAVADFFAVFVIDFRTERAAFVSAHRTQAAAVEVFKEGDFFGSAVAARNADFAAEHQR
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| a571
FVAAVADFFAVFVIHFRTERAAFVSAHRTQAAAVEVFKEGDFFGSAVAARNADFAAEHQR 70 80
90 100 110 120 130 140 150 160 m571.pep
EGFAQGEEPGLVVGGGVVLQFAARQGDFGVHARQVAARRPX |||| ||||||||||||||||||
||||||||||||||||| a571 EGFAXGEEPGLVVGGGVVLQFAAGQGDFGVHARQVAARRPX
130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1713>:
TABLE-US-02076 g572.seq.. 1 atgtgcgcca tcgtcggggc ggcggggctg
ccttccgcgc tcgcagcggc 51 gcaaaaaggc aaaaccattt atctggcaaa
caaagaaacg ctggtggttt 101 ccggcgcgtt gtttatggaa accgcccgcg
caaacggcgc ggcagtgttg 151 cccgtcgaca gcgaacacaa cgccattttc
caagttttgc cgcgcgatta 201 cacagaccgt ctgaacgaac acggcatcga
ttcgattatc ctgaccgctt 251 ccggcggccc gtttttaaca accgatttaa
gcacgttcga cagcattacg 301 cccgagcagg cggtcaaaca ccccaattgg
cgtatggggc gcaaaatctc 351 cgtcgattca gccactatgg caaacaaggg
cttggaactg attgaagcgc 401 attggctgtt caactgtccg cccgacaaac
tcgaagtcgt catccatccc 451 caatccgtga tacacagtat ggtgcgctac
cgcgacggct ccgtgctggc 501 gcaactgggc aatcccgata tgcgaacgcc
catcgcctat tgtttgggct 551 tgcccgagcg catcgattcg ggtgtcggca
aactcgattt cggcgcattg 601 tccgcgctga ccttccaaaa gcccgacttc
ggccgcttcc cctgcctgaa 651 gttcgcctat gaaaccataa acgcaggcgg
agccgcgccc tgcgtattga 701 acgccgccaa cgaaaccgcc gtcgccgcct
ttttggacgg acagattaag 751 tttaccgaca ttgccaaaac cgtcgcccac
tgtcttgcac aagacttttc 801 aaacggcatg ggcgatatag aaggactgtt
ggcgcaagat gcccggacac 851 gcgcacaagc gcgggcattt atcggcacac
tgcgctga
This corresponds to the amino acid sequence <SEQ ID 1714; ORF
572.ng>:
TABLE-US-02077 g572.pep.. 1 MCAIVGAAGL PSALAAAQKG KTIYLANKET
LVVSGALFME TARANGAAVL 51 PVDSEHNAIF QVLPRDYTDR LNEHGIDSII
LTASGGPFLT TDLSTFDSIT 101 PEQAVKHPNW RMGRKISVDS ATMANKGLEL
IEAHWLFNCP PDKLEVVIHP 151 QSVIHSMVRY RDGSVLAQLG NPDMRTPIAY
CLGLPERIDS GVGKLDFGAL 201 SALTFQKPDF GRFPCLKFAY ETINAGGAAP
CVLNAANETA VAAFLDGQIK
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1715>:
TABLE-US-02078 m572.seq.. 1 ATGTGCGCCA TCGTCGGGGC GGTGGGGCTG
CCTTCCGCGC TCGCAGCGGC 51 GCAAAAAGGC AAAACCATTT ATCTGGCAAA
CAAAGAAACG CTGGTGGTTT 101 CCGGCGCGTT GTTTATGGAA ACCGCCCGTG
CAAACGGCGC GGCAGTGCTG 151 CCCGTCGACA GCGAACACAA CGCCGTTTTC
CAAGTTTTGC CGCGCGATTA 201 CGCCGGCCGT CTGAACGAAC ACGGCATCGC
TTCGATTATC CTGACCGCTT 251 CCGGCGGCCC GTTTCTGACC GCCGATTTAA
ACACGTTCGA CCGCATTACG 301 CCCGCCCAAG CGGTCAAACA CCCCAATTGG
CGTATGGGAC GCAAAATCTC 351 CGTCGATTCC GCCACCATGA TGAACAAAGG
TTTGGAGCTG ATTGAAGCGC 401 ATTGGCTGTT CAACTGTCCG CCCGACAAAC
TCGAAGTCGT CATCCATCCG 451 CAATCCGTGA TACACAGCAT GGTGCGCTAC
CGCGACGGCT CCGTGCTGGC 501 GCAACTGGGC AATCCCGATA TGCGAACGCC
CATCGCTTAT TGTTTGGGTT 551 TGCCCGAGCG CATCGATTCG GGTGTCGGCG
ACCTGGATTT CGACGCATTG 601 TCCGCGCTGA CCTTCCAAAA GCCCGACTTT
GACCGCTTCC CCTGCCTGAG 651 GCTCGCCTAT GAAGCCATGA ACGCAGGCGG
AGCCGCGCCC TGCGTATTGA 701 ACGCCGCCAA CGAAGCCGCC GTCGCCGCCT
TTTTGGACGG ACAGATTAAG 751 TTTACCGACA TTGCCAAAAC CGTCGCCCAC
TGTCTTGCAC AAGACTTTTC 801 AGACGGCATA GGCGATATAG GGGGGCTCTT
GGCGCAAGAT GCCCGGACAC 851 GCGCACAAGC GCGAGCATTT ATCGGCACAC
TGCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1716; ORF
572>:
TABLE-US-02079 m572.pep.. 1 MCAIVGAVGL PSALAAAQKG KTIYLANKET
LVVSGALFME TARANGAAVL 51 PVDSEHNAVF QVLPRDYAGR LNEHGIASII
LTASGGPFLT ADLNTFDRIT 101 PAQAVKHPNW RMGRKISVDS ATMMNKGLEL
IEAHWLFNCP PDKLEVVIHP 151 QSVIHSMVRY RDGSVLAQLG NPDMRTPIAY
CLGLPERIDS GVGDLDFDAL 201 SALTFQKPDF DRFPCLRLAY EAMNAGGAAP
CVLNAANEAA VAAFLDGQIK 251 FTDIAKTVAH CLAQDFSDGI GDIGGLLAQD
ARTRAQARAF IGTLR* m572/g572 92.9% identity in 295 aa overlap 10 20
30 40 50 60 m572.pep
MCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARANGAAVLPVDSEHNAVF
|||||||:||||||||||||||||||||||||||||||||||||||||||||||||||:| g572
MCAIVGAAGLPSALAAAQKGKTIYLANKETLVVSGALFMETARANGAAVLPVDSEHNAIF 10 20
30 40 50 60 70 80 90 100 110 120 m572.pep
QVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDRITPAQAVKHPNWRMGRKISVDS
|||||||: ||||||| |||||||||||||:||:||| ||| |||||||||||||||||| g572
QVLPRDYTDRLNEHGIDSIILTASGGPFLTTDLSTFDSITPEQAVKHPNWRMGRKISVDS 70 80
90 100 110 120 130 140 150 160 170 180 m572.pep
ATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAY |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g572
ATMANKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAY 130
140 150 160 170 180 190 200 210 220 230 240 m572.pep
CLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLRLAYEAMNAGGAAPCVLNAANEAA
||||||||||||| ||| |||||||||||| |||||::|||::|||||||||||||||:| g572
CLGLPERIDSGVGKLDFGALSALTFQKPDFGRFPCLKFAYETINAGGAAPCVLNAANETA 190
200 210 220 230 240 250 260 270 280 290 m572.pep
VAAFLDGQIKFTDIAKTVAHCLAQDFSDGIGDIGGLLAQDARTRAQARAFIGTLRX
|||||||||||||||||||||||||||:|:||| |||||||||||||||||||||| g572
VAAFLDGQIKFTDIAKTVAHCLAQDFSNGMGDIEGLLAQDARTRAQARAFIGTLRX 250 260
270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1717>:
TABLE-US-02080 a572.seq 1 ATGTGCGCCA TCGTCGGGGC GGTGGGGCTG
CCTTCCGCGC TCGCAGCGGC 51 GCAAAAAGGC AAAACCATTT ATCTGGCGAA
CAAAGAGACG CTGGTGGTTT 101 CCGGCGCGTT GTTTATGGAA ACCGCCCGTG
CAAACGGCGC GGCAGTGCTG 151 CCCGTCGACA GCGAACACAA CGCCGTTTTC
CAAGTTTTGC CGCGCGATTA 201 CACAGGTCGC CTGAACGAAC ACGGCATCGC
TTCGATTATC CTGACCGCTT 251 CCGGCGGCCC GTTTCTGACC GCCGATTTAA
ACACGTTCGA CAGCATTACG 301 CCCGACCAAG CGGTCAAACA CCCCAATTGG
CGTATGGGAC GCAAAATCTC 351 CGTCGATTCC GCCACCATGA TGAACAAAGG
TTTGGAGCTG ATTGAAGCGC 401 ATTGGCTGTT CAACTGTCCG CCCGACAAAC
TCGAAGTCGT CATCCATCCG 451 CAATCTGTGA TACACAGCAT GGTGCGCTAC
CGCGACGGCT CCGTGTTGGC 501 GCAACTGGGC AATCCCGATA TGCGAACGCC
TATCGCTTAT TGTTTGGGTT 551 TGCCCGAGCG CATCGATTCG GGTGTCGGCG
ACCTGGATTT CGACGCATTG 601 TCCGCGCTGA CCTTCCAAAA GCCCGACTTT
GACCGCTTCC CCTGCCTGAA 651 GCTCGCCTAT GAAGCCATGA ACGCAGGCGG
AGCCGCGCCC TGCGTATTGA 701 ACGCCGCCAA CGAAGCCGCC GTCGCCGCCT
TTTTGGACGG ACAGATTAAG 751 TTTACCGACA TTGCCAAAAC CGTCGCCCAT
TGTCTTTCAC AAGACTTTTC 801 AGACGGCATA GGCGACATAG GGGGGCTCTT
GGCGCAAGAT GCCCGGACAC 851 GCGCACAAGC GCGGGCATTT ATCGGCACAC
TGCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1718; ORF
572.a>:
TABLE-US-02081 a572.pep 1 MCAIVGAVGL PSALAAAQKG KTIYLANKET
LVVSGALFME TARANGAAVL 51 PVDSEHNAVF QVLPRDYTGR LNEHGIASII
LTASGGPFLT ADLNTFDSIT 101 PDQAVKHPNW RMGRKISVDS ATMMNKGLEL
IEAHWLFNCP PDKLEVVIHP 151 QSVIHSMVRY RDGSVLAQLG NPDMRTPIAY
CLGLPERIDS GVGDLDFDAL 201 SALTFQKPDF DRFPCLKLAY EAMNAGGAAP
CVLNAANEAA VAAFLDGQIK 251 FTDIAKTVAH CLSQDFSDGI GDIGGLLAQD
ARTRAQARAF IGTLR* m572/a572 98.3% identity in 295 aa overlap 10 20
30 40 50 60 m572.pep
MCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARANGAAVLPVDSEHNAVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a572
MCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARANGAAVLPVDSEHNAVF 10 20
30 40 50 60 70 80 90 100 110 120 m572.pep
QVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDRITPAQAVKHPNWRMGRKISVDS
|||||||:||||||||||||||||||||||||||||| ||| |||||||||||||||||| a572
QVLPRDYTGRLNEHGIASIILTASGGPFLTADLNIFDSITPDQAVKHPNWRMGRKISVDS 70 80
90 100 110 120 130 140 150 160 170 180 m572.pep
ATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a572
ATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAY 130
140 150 160 170 180 190 200 210 220 230 240 m572.pep
CLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLRLAYEAMNAGGAAPCVLNAANEAA
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| a572
CLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKLAYEAMNAGGAAPCVLNAANEAA 190
200 210 220 230 240 250 260 270 280 290 m572.pep
VAAFLDGQIKFTDIAKTVAHCLAQDFSDGIGDIGGLLAQDARTRAQARAFIGTLRX
||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a572
VAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGLLAQDARTRAQARAFIGILRX 250 260
270 280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1719>:
TABLE-US-02082 g573.seq.. 1 atgccctgtt tgtgccgcct taatcgcaat
atcggcagtt tccaaatcac 51 gaatctcacc gaccataatg atgtccgggt
cctgacgcag gaaagacttc 101 aaagcagcgg caaaagtcag accctgctta
tcattgacgt taacctgatt 151 gatgcccggc aggttaatct cggcagggtc
ttccgccgtt gcaatattta 201 ccgactccgt attcaaaata ttcaaacagg
tatagagcga caccgtctta 251 cccgaacccg tcggaccggt taccagcacc
atcccgtaag gacggtgaat 301 cgcttccaac aacaattttt tctggaacgg
ctcaaaaccg agctggtcga 351 tgttcaaaga cgcggcatcg gaattcaaaa
tccgcatcac gaccttttcg 401 ccaaacagcg tcggcaatgt gctgacacgg
aaatcgacag gcttgccgcc 451 cttttgaaag gtcagctgca tcctaccgtc
ctgcggtatc cgtttttcgg 501 aaatgtccaa acgcgacatt accttaatcc
gggaagcaag ctgccccctt 551 accgcaatgg gcggctgaac cacctcgcgg
agctgcccgt ccacacggaa 601 acggatacgc gcattgtgtt cgtaaaactc
gaaatggatg tcggatgccc 651 cgctacgcaa ggcatccgac aaagttttat
ggataaacct cggaacaggg 701 ccgtcttctg cctcctcgtc gtcgatatac
agggtgtggc tttcctcttc 751 ctcttgcccc tccccaagct cctgaagcag
cgatgtcgaa cgcgaaccca 801 cccaatcgag caaacccgcc aactggtcat
cctcgacaat gaccaactca 851 accgcaatcc ctgcggcaga aaccgttttc
tgaatttgcg gcatctgggt 901 cggatcggaa accgcaaaaa atactttgtc
gcccccacgg aaaaccggca 951 cacagtggaa ctccaccatc tgctcctccg
tcaacacccc catcagcacc 1001 ctgtggcgcg gataatgacg caaatcaaga
atcgaataac tgaacaccct 1051 cgcaatcaat gccgcaagcg acttgggcga
aatgacaccg tctga
This corresponds to the amino acid sequence <SEQ ID 1720; ORF
573.ng>:
TABLE-US-02083 g573.pep.. 1 MPCLCRLNRN IGSFQITNLT DHNDVRVLTQ
ERLQSSGKSQ TLLIIDVNLI 51 DARQVNLGRV FRRCNIYRLR IQNIQTGIER
HRLTRTRRTG YQHHPVRTVN 101 RFQQQFFLER LKTELVDVQR RGIGIQNPHH
DLFAKQRRQC ADTEIDRLAA 151 LLKGQLHPTV LRYPFFGNVQ TRHYLNPGSK
LPPYRNGRLN HLAELPVHTE 201 TDTRIVFVKL EMDVGCPATQ GIRQSFMDKP
RNRAVFCLLV VDIQGVAFLF 251 LLPLPKLLKQ RCRTRTHPIE QTRQLVILDN
DQLNRNPCGR NRFLNLRHLG 301 RIGNRKKYFV APTENRHTVE LHHLLLRQHP
HQHPVARIMT QIKNRITEHP 351 RNQCRKRLGR NDTV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1721>:
TABLE-US-02084 m573.seq.. 1 ATGCCCTGTT TGTGCCGCCT TAATCGCAAT
ATCGGCAGTT TCCAAATCAC 51 GAATCTCACC GACCATAATG ATGTCCGGGT
CCTGACGCAG GAAAGACTTC 101 AAAGCAGCGG CAAAAGTCAG GCCCTGCTTA
TCATTGACGT TAACCTGATT 151 GATGCCCGGC AGGTTAATCT CGGCAGGGTC
TTCCGCCGTT GCAATATTTA 201 CCGACTCCGT ATTCAAAATA TTCAAACAGG
TATAGAGCGA CACCGTCTTA 251 CCCGAACCCG TCGGACCGGT TACCAGCACC
ATCCCGTAGG GACGGTGAAT 301 CGCTACCAAC aCaw.TTTTT TCTGAAACGG
CTCAAAACCG AGCTGGTCGA 351 TGTTCAAAGA CGCGGCATCG GAATTCAAAA
TCCGCATCAC GACCTTTTCG 401 CCAAACAGCG TCGGCAATGT GCTGACACGG
AAATCGACAG GCTTGCCGCC 451 CTTTTGAAAG GTCAGCTGCA TCCTGCCGTC
CTGCGGTATC CGTTTTTCGG 501 AAATGTCCAA ACGCGACATT ACCTTAATCC
GTGAAGCAAG CTGCCCCCTT 551 ACCGCAATGG GCGGCTGAAC CACCTCGCGG
AGCTGCCCGT CCACACGGAA 601 ACGGATACGG GCATTGTGTT CGTAAAACTC
GAAATGGATG TCCGATGCCC 651 CGCTGCGCAA GGCATCCGAC AAAGTCTTAT
GGATAAACCT CGGAACAGGG 701 CCGTCTTCTG CCTCCTCGTT GTCGATATAC
AGGGTGTGGC TTTCCTCTTC 751 CTCCTGCCCC TCCCCAAGCT CCTGAAGCAG
CGATGTCGAA CGCGAACCCA 801 CCCAATCGAG CAAACCCGCC AACTGGTCAT
CCTCGACAAT GACCAACTCA 851 ACCTCAATCC CTGCGGCAGA AACGGTTTTC
TGAATTTGCG GCATCTGTGT 901 CGGATCGGAA ACCGCAAAAA ATACTTTGTC
GCCCCGACGG AAAACCGGCA 951 CACAGTGGAA CTCCACCATC TGCTCCTCCG
TCAACACCCC CATCAGCACC 1001 CTGTGGCGCG GATAATGACG CAAATCAAGA
ATCGAATAAC TGAACACCCT 1051 CGCAATCAAT GCCGCAAGCG ACTTGGGCGA
AATGACACCG TCTGA
This corresponds to the amino acid sequence <SEQ ID 1722; ORF
573>:
TABLE-US-02085 m573.pep.. 1 MPCLCRLNRN IGSFQITNLT DHNDVRVLTQ
ERLQSSGKSQ ALLIIDVNLI 51 DARQVNLGRV FRRCNIYRLR IQNIQTGIER
HRLTRTRRTG YQHHPVGTVN 101 RYQHXFFLKR LKTELVDVQR RGIGIQNPHH
DLFAKQRRQC ADTEIDRLAA 151 LLKGQLHPAV LRYPFFGNVQ TRHYLNP*SK
LPPYRNGRLN HLAELPVHTE 201 TDTGIVFVKL EMDVRCPAAQ GIRQSLMDKP
RNRAVFCLLV VDIQGVAFLF 251 LLPLPKLLKQ RCRTRTHPIE QTRQLVILDN
DQLNLNPCGR NGFLNLRHLC 301 RIGNRKKYFV APTENRHTVE LHHLLLRQHP
HQHPVARIMT QIKNRITEHP 351 RNQCRKRLGR NDTV* m573/g573 95.9% identity
in 364 aa overlap 10 20 30 40 50 60 m573.pep
MPCLCRLNRNIGSFQITNLTDHNDVRVLTQERLQSSGKSQALLIIDVNLIDARQVNLGRV
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||| g573
MPCLCRLNRNIGSFQITNLTDHNDVRVLTQERLQSSGKSQTLLIIDVNLIDARQVNLGRV 10 20
30 40 50 60 70 80 90 100 110 120 m573.pep
FRRCNIYRLRIQNIQTGIERHRLTRTRRTGYQHHPVGTVNRYQHXFFLKRLKTELVDVQR
|||||||||||||||||||||||||||||||||||| ||||:|: |||:||||||||||| g573
FRRCNIYRLRIQNIQTGIERHRLTRTRRTGYQHHPVRTVNRFQQQFFLERLKTELVDVQR 70 80
90 100 110 120 130 140 150 160 170 180 m573.pep
RGIGIQNPHHDLFAKQRRQCADTEIDRLAALLKGQLHPAVLRYPFFGNVQTRHYLNPXSK
||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| || g573
RGIGIQNPHHDLFAKQRRQCADTEIDRLAALLKGQLHPTVLRYPFFGNVQTRHYLNPGSK 130
140 150 160 170 180 190 200 210 220 230 240 m573.pep
LPPYRNGRLNHLAELPVHTELDTGIVFVKLEMDVRCPAAQGIRQSLMDKPRNRAVFCLLV
||||||||||||||||||||||| |||||||||| |||:||||||:|||||||||||||| g573
LPPYRNGRLNHLAELPVHTELDTRIVFVKLEMDVGCPATQGIRQSFMDKPRNRAVFCLLV 190
200 210 220 230 240 250 260 270 280 290 300 m573.pep
VDIQGVAFLFLLPLPKLLKQRCRTRTHPIEQTRQLVILDNDQLNLNPCGRNGFLNLRHLC
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| g573
VDIQGVAFLFLLPLPKLLKQRCRTRTHPIEQTRQLVILDNDQLNRNPCGRNRFLNLRHLG 250
260 270 280 290 300 310 320 330 340 350 360 m573.pep
RIGNRKKYFVAPTENRHTVELHHLLLRQHPHQHPVARIMTQIKNRITEHPRNQCRKRLGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g573
RIGNRKKYFVAPTENRHTVELHHLLLRQHPHQHPVARIMTQIKNRITEHPRNQCRKRLGR 310
320 330 340 350 360 m573.pep NDTVX ||||| g573 NDTVX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1723>:
TABLE-US-02086 a573.seq 1 ATGCCCTGTT TGTGCCGCCT TAATCGCAAT
ATCGGCAGTT TCCAAATCAC 51 GAATCTCACC GACCATAATG ATGTCCGGGT
CCTGACGCAG GAAAGACTTC 101 AAAGCAGCGG CAAAAGTCAG ACCCTGCTTA
TCATTGACGT TAACCTGATT 151 GATGCCCGGC AGGTTAATCT CGGCAGGGTC
TTCCGCCGTT GCAATATTTA 201 CCGACTCCGT ATTCAAAATA TTCAAACAGG
TATAGAGCGA CACCGTCTTA 251 CCCGAACCCG TCGGACCGGT TACCAGCACC
ATCCCGTAGG GACGGTGAAT 301 CGCTTCCAAC AACAATTTTT TCTGAAACGG
CTCAAAACCG AGCTGGTCGA 351 TGTTCAAAGA CGCGGCATCG GAATTCAAAA
TCCGCATCAC GACCTTTTCG 401 CCAAACAGCG TCGGCAATGT GCTGACACGG
AAATCGACAG GCTTGCCGCC 451 CTTTTGAAAG GTCAGCTGCA TCCTGCCGTC
CTGCGGTATC CGTTTTTCGG 501 AAATGTCCAA ACGCGACATT ACCTTAATCC
GGGAAGCAAG CTGCCCCCTT 551 ACCGCAATGG GCGGCTGAAC CACCTCGCGG
AGCTGCCCGT CCACACGGAA 601 ACGGATACGG GCATTGTGTT CGTAAAACTC
GAAATGGATG TCCGATGCCC 651 CGCTGCGCAA GGCATCCGAC AAAGTCTTAT
GGATAAACCT CGGAACAGGG 701 CCGTCTTCTG CCTCCTCGTT GTCGATATAC
AGGGTGTGGC TTTCCTCTTC 751 CTCCTGCCCC TCCCCAAGCT CCTGAAGCAG
CGATGTCGAA CGCGAACCCA 801 CCCAATCGAG CAAACCCGCC AACTGGTCAT
CCTCGACAAT GACCAACTCA 851 ACCTCAATCC CTGCGGCAGA AACGGTTTTC
TGAATTTGCG GCATCTGTGT 901 CGGATCGGAA ACCGCAAAAA ATACTTTGTC
GCCCCGACGG AAAACCGGCA 951 CACAGTGGAA CTCCACCATC TGCTCCTCCG
TCAACACCCC CATCAGCACC 1001 CTGTGGCGCG GATAATGACG CAAATCAAGA
ATCGAATAAC TGAACACCCT 1051 CGCAATCAAT GCCGCAAGCG ACTTGGGCGA
AATGACACCG TCTGA
This corresponds to the amino acid sequence <SEQ ID 1724; ORF
573.a>:
TABLE-US-02087 a573.pep 1 MPCLCRLNRN IGSFQITNLT DHNDVRVLTQ
ERLQSSGKSQ TLLIIDVNLI 51 DARQVNLGRV FRRCNIYRLR IQNIQTGIER
HRLTRTRRTG YQHHPVGTVN 101 RFQQQFFLKR LKTELVDVQR RGIGIQNPHH
DLFAKQRRQC ADTEIDRLAA 151 LLKGQLHPAV LRYPFFGNVQ TRHYLNPGSK
LPPYRNGRLN HLAELPVHTE 201 TDTGIVFVKL EMDVRCPAAQ GIRQSLMDKP
RNRAVFCLLV VDIQGVAFLF 251 LLPLPKLLKQ RCRTRTHPIE QTRQLVILDN
DQLNLNPCGR NGFLNLRHLC 301 RIGNRKKYFV APTENRHTVE LHHLLLRQHP
HQHPVARIMT QIKNRITEHP 351 RNQCRKRLGR NDTV* m573/a573 98.6% identity
in 364 aa overlap 10 20 30 40 50 60 m573.pep
MPCLCRLNRNIGSFQITNLTDHNDVRVLTQERLQSSGKSQALLIIDVNLIDARQVNLGRV
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||| a573
MPCLCRLNRNIGSFQITNLTDHNDVRVLTQERLQSSGKSQTLLIIDVNLIDARQVNLGRV 10 20
30 40 50 60 70 80 90 100 110 120 m573.pep
FRRCNIYRLRIQNIQTGIERHRLTRTRRTGYQHHPVGTVNRYQHXFFLKRLKTELVDVQR
|||||||||||||||||||||||||||||||||||||||||:|: ||||||||||||||| a573
FRRCNIYRLRIQNIQTGIERHRLTRTRRTGYQHHPVGTVNRFQQQFFLKRLKTELVDVQR 70 80
90 100 110 120 130 140 150 160 170 180 m573.pep
RGIGIQNPHHDLFAKQRRQCADTEIDRLAALLKGQLHPAVLRYPFFGNVQTRHYLNPXSK
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || a573
RGIGIQNPHHDLFAKQRRQCADTEIDRLAALLKGQLHPAVLRYPFFGNVQTRHYLNPGSK 130
140 150 160 170 180 190 200 210 220 230 240 m573.pep
LPPYRNGRLNHLAELPVHTETDTGIVFVKLEMDVRCPAAQGIRQSLMDKPRNRAVFCLLV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a573
LPPYRNGRLNHLAELPVHTETDTGIVFVKLEMDVRCPAAQGIRQSLMDKPRNRAVFCLLV 190
200 210 220 230 240 250 260 270 280 290 300 m573.pep
VDIQGVAFLFLLPLPKLLKQRCRTRTHPIEQTRQLVILDNDQLNLNPCGRNGFLNLRHLC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a573
VDIQGVAFLFLLPLPKLLKQRCRTRTHPIEQTRQLVILDNDQLNLNPCGRNGFLNLRHLC 250
260 270 280 290 300 310 320 330 340 350 360 m573.pep
RIGNRKKYFVAPTENRHTVELHHLLLRQHPHQHPVARIMTQIKNRITEHPRNQCRKRLGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a573
RIGNRKKYFVAPTENRHTVELHHLLLRQHPHQHPVARIMTQIKNRITEHPRNQCRKRLGR 310
320 330 340 350 360 m573.pep NDTVX ||||| a573 NDTVX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1725>:
TABLE-US-02088 g574.seq 1 atgctgccga atctgccaaa cagccttaag
aaagccgata tggacaacga 51 attgtggatt atcctgctgc cgattatcct
tttgcccgtc ttcttcacga 101 tgggctggtt tgccgcccgc gtggatatga
aaaccgtatt gaagcaggca 151 aaaagcatcc cttcgggatt ttataaaagc
ctggacgctt tggtcgaccg 201 caacagcggg cgcgcggcaa gggagttggc
ggaagtcgtc gacggccggc 251 cgcaatcgta tgatttgaac cttaccctcg
gcaaacttta ccgtcagcgc 301 ggcgaaaacg acaaagccat caacatacac
cggacaatgc tcgattctcc 351 cgatacggtc ggcgaaaagc gcgcgcgcgt
cctgtttgaa ttggcgcaaa 401 actaccaaag cgcgggtttg gtcgatcgtg
ccgaacagat ttttttgggg 451 ctgcaagacg gtgaaatggc gcgtgaagcc
agacagcacc tgctcaatat 501 ctaccagcag gacagggatt gggaaaaagc
ggttgaaacc gcccaacttc 551 ttagtcacga cgaacagaca tatcagtttg
agattgcaca gttttattgc 601 gaacttgccc aagccgcgct gttcaagtcc
aatttcgatg ccgcgcgttt 651 caatgtcggc aaggcactcg aagccaacaa
aaaatgcacc cgcgccaaca 701 tgattttggg cgacattgaa caccgacaag
gcaatttccc tgccgccgtc 751 gaagcctatg ccgccatcga gcagcaaaac
catgcatact tgagcatggt 801 cggcgagaag ctttacgaag cctatgccgc
gcagggaaaa cctgaagaag 851 gcttgaaccg tctgacagga tatatgcaga
cgtttcccga acttgacctg 901 atcaatgtcg tgtacgagaa atccctgctg
cttaagggcg agaaagaagc 951 cgcgcaaacc gccgtcgagc ttgtccgccg
caagcccgac cttaacggcg 1001 tgtaccgcct gctcggtttg aaactcagcg
atttggatcc ggcttggaaa 1051 gccgatgccg acatgatgcg ttcggttatc
ggacggcagc tccagcgcag 1101 cgtgatgtac cgttgccgca actgccactt
caaatcccaa gtctttttct 1151 ggcactgtcc cgcctgcaac aaatggcaga
cgtttacgcc gaataaaatc 1201 gaagtttaa
This corresponds to the amino acid sequence <SEQ ID 1726; ORF
574.ng>:
TABLE-US-02089 g574.pep.. 1 MLPNLPNSLK KADMDNELWI ILLPIILLPV
FFTMGWFAAR VDMKTVLKQA 51 KSIPSGFYKS LDALVDRNSG RAARELAEVV
DGRPQSYDLN LTLGKLYRQR 101 GENDKAINIH RTMLDSPDTV GEKRARVLFE
LAQNYQSAGL VDRAEQIFLG 151 LQDGEMAREA RQHLLNIYQQ DRDWEKAVET
AQLLSHDEQT YQFEIAQFYC 201 ELAQAALFKS NFDAARFNVG KALEANKKCT
RANMILGDIE HRQGNFPAAV 251 EAYAAIEQQN HAYLSMVGEK LYEAYAAQGK
PEEGLNRLTG YMQTFPELDL 301 INVVYEKSLL LKGEKEAAQT AVELVRRKPD
LNGVYRLLGL KLSDLDPAWK 351 ADADMMRSVI GRQLQRSVMY RCRNCHFKSQ
VFFWHCPACN KWQTFTPNKI 401 EV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1727>:
TABLE-US-02090 m574.seq.. 1 ATGCGCCCGA ATCTACCAAA CAGCCTTAAG
AAAGCCGATA TGGACAACGA 51 ATTGTGGATT ATCCTGCTGC CGATTATCCT
TTTGCCCGTC TTCTTCGCGA 101 TGGGCTGGTT TGCCGCCCGC GTGGATATGA
AAACCGTATT GAAGCAGGCA 151 AAAAGCATCC CTTCGGGATT TTATAAAAGC
TTGGACGCTT TGGTCGACCG 201 CAACAGCGGG CGCGCGGCAA GGGAGTTGGC
GGAAGTCGTC GACGGCCGGC 251 CGCAATCGTA TGATTTGAAC CTCACCCTCG
GCAAACTTTA CCGCCAGCGT 301 GGCGAAAACG ACAAAGCCAT CAACATACAC
CGGACAATGC TCGATTCTCC 351 CGATACGGTC GGCGAAAAGC GCGCGCGCGT
CCTGTTTGAA TTGGCGCAAA 401 ACTACCAAAG TGCGGGGTTG GTCGATCGTG
CCGAACAGAT TTTTTTGGGG 451 CTGCAAGACG GTAAAATGGC GCGTGAAGCC
AGACAGCACC TGCTCAATAT 501 CTACCAACAG GACAGGGATT GGGAAAAAGC
GGTTGAAACC GCCCGGCTGC 551 TCAGCCATGA CGATCAGACC TATCAGTTTG
AAATCGCCCA GTTTTATTGC 601 GAACTTGCCC AAGCCGCGCT GTTCAAGTCC
AATTTCGATG TCGCGCGTTT 651 CAATGTCGGC AAGGCACTCG AAGCCAACAA
AAAATGCACC CGCGCCAACA 701 TGATTTTGGG CGACATCGAA CACCGACAAG
GCAATTTCCC TGCCGCCGTC 751 GAAGCCTATG CCGCCATCGA GCAGCAAAAC
CATGCATACT TGAGCATGGT 801 CGGCGAGAAG CTTTACGAAG CCTATGCCGC
GCAGGGAAAA CCTGAAGAAG 851 GCTTGAACCG TCTGACAGGA TATATGCAGA
CGTTTCCCGA ACTTGACCTG 901 ATCAATGTCG TGTACGAGAA ATCCCTGCTG
CTTAAGTGCG AGAAAGAAGC 951 CGCGCAAACC GCCGTCGAGC TTGTCCGCCG
CAAGCCCGAC CTTAACGGCG 1001 TGTACCGCCT GCTCGGTTTG AAACTCAGCG
ATATGAATCC GGCTTGGAAA 1051 GCCGATGCCG ACATGATGCG TTCGGTTATC
GGACGGCAGC TACAGCGCAG 1101 CGTGATGTAC CGTTGCCGCA ACTGCCACTT
CAAATCCCAA GTCTTTTTCT 1151 GGCACTGCCC CGCCTGCAAC AAATGGCAGA
CGTTTACCCC GAATAAAATC 1201 GAAGTTTAA
This corresponds to the amino acid sequence <SEQ ID 1728; ORF
574>:
TABLE-US-02091 m574.pep.. 1 MRPNLPNSLK KADMDNELWI ILLPIILLPV
FFAMGWFAAR VDMKTVLKQA 51 KSIPSGFYKS LDALVDRNSG RAARELAEVV
DGRPQSYDLN LTLGKLYRQR 101 GENDKAINIH RTMLDSPDTV GEKRARVLFE
LAQNYQSAGL VDRAEQIFLG 151 LQDGKMAREA RQHLLNIYQQ DRDWEKAVET
ARLLSHDDQT YQFEIAQFYC 201 ELAQAALFKS NFDVARFNVG KALEANKKCT
RANMILGDIE HRQGNFPAAV 251 EAYAAIEQQN HAYLSMVGEK LYEAYAAQGK
PEEGLNRLTG YMQTFPELDL 301 INVVYEKSLL LKCEKEAAQT AVELVRRKPD
LNGVYRLLGL KLSDMNPAWK 351 ADADMMRSVI GRQLQRSVMY RCRNCHFKSQ
VFFWHCPACN KWQTFTPNKI 401 EV* m573/g573 97.8% identity in 402 aa
overlap 10 20 30 40 50 60 m574.pep
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKS |
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| g574
MLPNLPNSLKKADMDNELWIILLPIILLPVFFTMGWFAARVDMKTVLKQAKSIPSGFYKS 10 20
30 40 50 60 70 80 90 100 110 120 m574.pep
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g574
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTV 70 80
90 100 110 120 130 140 150 160 170 180 m574.pep
GEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRDWEKAVET
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| g574
GEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRDWEKAVET 130
140 150 160 170 180 190 200 210 220 230 240 m574.pep
ARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
|:|||||:|||||||||||||||||||||||||:|||||||||||||||||||||||||| g574
AQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIE 190
200 210 220 230 240 250 260 270 280 290 300 m574.pep
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g574
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL 250
260 270 280 290 300 310 320 330 340 350 360 m574.pep
INVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNPAWKADADMMRSVI
|||||||||||| |||||||||||||||||||||||||||||||::|||||||||||||| g574
INVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVI 310
320 330 340 350 360 370 380 390 400 m574.pep
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEVX
||||||||||||||||||||||||||||||||||||||||||| g574
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEVX 370 380 390 400
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1729>:
TABLE-US-02092 a574.seq 1 ATGCGCCCGA ATCTGCCAAA CAGCCTTGAG
AAAGCCGATA TGGACAATGA 51 ATTGTGGATT ATCCTGCTGC CGATTATCCT
TTTGCCCGTT TTCTTCGCGA 101 TGGGCTGGTT TGCCGCCCGC GTGGATATGA
AGACTGTATT AAAGCAGGCA 151 AAAAGCATAC CGTCGGGATT TTATAAAAGT
CTGGATGCCT TGGTTGACCG 201 CAACAGCGGG CGCGCGGCAA GGGAGTTGGC
GGAAGTCGTC GACGGCCGGC 251 CGCAATCGTA TGATTTGAAC CTCACCCTCG
GCAAACTTTA CCGCCAGCGT 301 GGCGAAAACG ACAAAGCCAT CAATATGCAC
CAAACATTGC TTGACTCTCC 351 CGATACAACC GGAGCCAAGC GCGCGCGCGT
CCTGTTTGAA TTGGCGCAAA 401 ACTACCAAAG TGCGGGGTTG GTCGATCGTG
CCGAACAGAT TTTTTTGGGG 451 CTGCAAGACG GTGAAATGGC GCGTGAAGCC
AGACAGCACC TGCTCAATAT 501 CTACCAACAG GACAGGGATT GGGAAAAAGC
GGTTGAAACC GCCCGGCTGC 551 TCAGCCATGA CGATCAGACC TATCAGTTTG
AAATCGCCCA GTTTTATTGC 601 GAACTTGCCC AAGCCGCGCT GTTCAAGTCC
AATTTCGATG CCGCGCGTTT 651 CAATGTCGGC AAGGCACTCG AAGCCAACAA
AAAATGCACC CGCGCCAACA 701 TGATTTTGGG CGACATCGAA CACCGACAAG
GCAATTTCCC TGCCGCCGTC 751 GAAGCCTATG CCGCCATCGA GCAGCAAAAC
CATGCATACT TGAGTATGGT 801 CGGCGAGAAG CTTTACGAAG CCTATGCCGC
GCAGGGAAAA CCTGAAGAAG 851 GCTTGAACCG TCTGACAGGA TATATGCAGA
CGTTTCCCGA ACTTGACCTG 901 ATCAATGTCG TGTACGAGAA ATCCCTGCTG
CTTAAGTGCG AGAAAGAAGC 951 CGCGCAAACC GCCGTCGAGC TTGTCCGCCG
CAAGCCCGAC CTCAACGGCG 1001 TGTACCGCCT GCTTGGTTTG AAACTCAGCG
ATTTGGATCC GGCTTGGAAA 1051 GCCGATGCCG ATATGATGCG TTCGGTTATC
GGACGGCAGC TACAGCGCAG 1101 CGTGATGTAC CGGTGCCGAA ACTGCCACTT
CAAATCACAA GTCTTTTTCT 1151 GGCATTGTCC TGCCTGCAAC AAATGGCAGA
CGTTTACGCC AAACAAAATC 1201 GAAGTTTAA
This corresponds to the amino acid sequence <SEQ ID 1730; ORF
574.a>:
TABLE-US-02093 a574.pep 1 MRPNLPNSLE KADMDNELWI ILLPIILLPV
FFAMGWFAAR VDMKTVLKQA 51 KSIPSGFYKS LDALVDRNSG RAARELAEVV
DGRPQSYDLN LTLGKLYRQR 101 GENDKAINMH QTLLDSPDTT GAKRARVLFE
LAQNYQSAGL VDRAEQIFLG 151 LQDGEMAREA RQHLLNIYQQ DRDWEKAVET
ARLLSHDDQT YQFEIAQFYC 201 ELAQAALFKS NFDAARFNVG KALEANKKCT
RANMILGDIE HRQGNFPAAV 251 EAYAAIEQQN HAYLSMVGEK LYEAYAAQGK
PEEGLNRLTG YMQTFPELDL 301 INVVYEKSLL LKCEKEAAQT AVELVRRKPD
LNGVYRLLGL KLSDLDPAWK 351 ADADMMRSVI GRQLQRSVMY RCRNCHFKSQ
VFFWHCPACN KWQTFTPNKI 401 EV* m574/a574 97.5% identity in 402 aa
overlap 10 20 30 40 50 60 m574.pep
MRPNLPNSLKKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKS
|||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| a574
MRPNLPNSLEKADMDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGFYKS 10 20
30 40 50 60 70 80 90 100 110 120 m574.pep
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLDSPDTV
||||||||||||||||||||||||||||||||||||||||||||||||:|:|:||||||: a574
LDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINMHQTLLDSPDTT 70 80
90 100 110 120 130 140 150 160 170 180 m574.pep
GEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRDWEKAVET |
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| a574
GAKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRDWEKAVET 130
140 150 160 170 180 190 200 210 220 230 240 m574.pep
ARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIE
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| a574
ARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIE 190
200 210 220 230 240 250 260 270 280 290 300 m574.pep
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a574
HRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPELDL 250
260 270 280 290 300 310 320 330 340 350 360 m574.pep
INVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNPAWKADADMMRSVI
||||||||||||||||||||||||||||||||||||||||||||::|||||||||||||| a574
INVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVI 310
320 330 340 350 360 370 380 390 400 m574.pep
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEVX
||||||||||||||||||||||||||||||||||||||||||| a574
GRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEVX 370 380 390 400
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1731>:
TABLE-US-02094 g575.seq (partial) 1 ..atgccgtgcc tccgccggca
agcagcaagg tgtacgaacc gccgaacaga 51 ccgtcaaaca gtccgctttc
ggtttcttct tcggcagaaa cctgttcgac 101 aggttcggca acgggttcgg
cggcaacttc actggctgtt tccgcaacag 151 gttcggaaac ggtgttaccg
gtttcgtcgg tcggcgtgtc gatggcagaa 201 gcggcggctt cttggggggg
cggattcggc agcggtttcc gatgcggcag 251 tatttgcagc gggtacaggt
ccgggttggc gttctgtcgc cgaagccgga 301 gtttcggaca ctgcgggttt
gggttcgggt cgaacggccg gtttttccgc 351 ttttgcttcg ggcgcggcaa
cttttgcttc aggtttttca accggttttt 401 cgacaggttt ctctatcggt
ttctccacag ttgcctgttt ggacggttca 451 gacggcatgg atgcagtttc
ggctttgggt ttcgccgttt gcggtttggg 501 ttgttccgct ttgatttttt
tgggtgctgc cgctttgatc ctgttcagat 551 tcggaatgtg a*
This corresponds to the amino acid sequence <SEQ ID 1732; ORF
575.ng>:
TABLE-US-02095 g575.pep (partial) 1 ..MPCLRRQAAR CTNRRTDRQT
VRFRFLLRQK PVRQVRQRVR RQLHWLFPQQ 51 VRKRCYRFRR SACRWQKRRL
LGGADSAAVS DAAVFAAGTG PGWRSVAEAG 101 VSDTAGLGSG RTAGFSAFAS
GAATFASGFS TGFSTGFSIG FSTVACLDGS 151 DGMDAVSALG FAVCGLGCSA
LIFLGAAALI LFRFGM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1733>:
TABLE-US-02096 m575.seq.. 1 ATGGTTTCGG GCGAGGAAGC CTTCAGGAAG
CCTGCCAGTC CGGAGGGTGA 51 GGCAGGTTTT GCGGAAGCTG TTTCTTCTGT
GCCGATATGG TTGTTTGAGG 101 GCAGGTTGTC GGAGAAATCG GTATCGACGG
TTTCCGGTTT GTTTTCGGCA 151 GTTTGGGCGA CAGATTCCGG TTCGGGCGTG
TCGATGACGA TTTCGACAGG 201 GTTGTACGGG TTGAAGGTCT CGGGCTCGTA
CACGCTGTCT GTGGATTCGA 251 TGGCGTTCCA ATCGGCATCC GCGCGTTTTT
GGGTTTCTTC ATCCTGCGTA 301 AGTGCGCCGG ATAAAATGCC GTTTTGCGCG
GCTGCCAGGC TGTCGAAATC 351 CAAGTCGATG CGGTTGGAAG GCGTATCGGT
TTCGACATCG AACGTTTGTT 401 TTGCCGATAA CTCTTCTTCA GATTCCCCAT
CTAAGGCAAG TGTGTCGTTT 451 ACATCGTTTT TCGGAGCGGG TTCGGGCGTT
GCCGGAGTTT CGACTTCGGC 501 AAAGGTGATT TCTATGCCGT CGTCTGCCGC
GTCGTCAAGG TCAGGCTCTT 551 CCTCAGGGAC GGATTCTTCG GTACGGCGCG
CGCGTTTGGA TTGGGCAAGG 601 CGCAAAAGCA GCAGCAGGGC GATTAATGCC
GCGCCTCCGC CGGCAAGCAG 651 CAAGGTGTAC GAACCGCCGA ACAGACCGTC
AAACAGTCCG CTTTCGGTTT 701 CTTCTTCGGC AGAAACCTGT TCGACAGGTT
CGGAAACGGC GTTACCGGTT 751 TCGTCGGTCG GCGTGTCGAT GGCAGAAGCG
GCGGCTTCTT GGGGGGCGGA 801 TTCGGCAGCG GTTTCCGATG CGGCAGTATT
TGCAGCGGGT ACAGGTTCGG 851 GTCGAACGGC CGGTTTTTCC GCTTTTGCTT
CGGGCGCGGC AACTTTTGCT 901 TCAGGTTTTT CAACCGGTTT CTCTACCGTT
GCCTGTTTGG ACGGTTCGGA 951 CGGCATGGAT GCGGTTTCGG CTTTGGGTTT
CGCCGTTTGC GGTTTGGGTT 1001 GTTCCGCTTT GATCCTGTTC AGATTCGGAA
TGTGA
This corresponds to the amino acid sequence <SEQ ID 1734; ORF
575>:
TABLE-US-02097 m575.pep 1 MVSGEEAFRK PASPEGEAGF AEAVSSVPIW
LFEGRLSEKS VSTVSGLFSA 51 VWATDSGSGV SMTISTGLYG LKVSGSYTLS
VDSMAFQSAS ARFWVSSSCV 101 SAPDKMPFCA AARLSKSKSM RLEGVSVSTS
NVCFADNSSS DSPSKASVSF 151 TSFFGAGSGV AGVSTSAKVI SMPSSAASSR
SGSSSGTDSS VRRARLDWAR 201 RKSSSRAINA APPPASSKVY EPPNRPSNSP
LSVSSSAETC STGSETALPV 251 SSVGVSMAEA AASWGADSAA VSDAAVFAAG
TGSGRTAGFS AFASGAATFA 301 SGFSTGFSTV ACLDGSDGMD AVSALGFAVC
GLGCSALILF RFGM* m575/g575 70.2% identity in 114 aa overlap 240 250
260 270 280 m575.pep
SSAETCSTGSETALPVSSVGVSMAEAAASWGADSAAVSDAAVFAAGTG------------
|||||||||||||||||| g575
LHWLFPQQVRKRCYRFRRSACRWQKRRLLGGADSAAVSDAAVFAAGTGPGWRSVAEAGVS 50 60
70 80 90 100 290 300 309 310 320 m575.pep
------SGRTAGFSAFASGAATFASGFSTGFST--------VACLDGSDGMDAVSALGFA
||||||||||||||||||||||||||| ||||||||||||||||||| g575
DTAGLGSGRTAGFSAFASGAATFASGFSTGFSTGFSIGFSTVACLDGSDGMDAVSALGFA 110
120 130 140 150 160 330 340 m575.pep VCGLGCSALI--------LFRFGMX
|||||||||| ||||||| g575 VCGLGCSALIFLGAAALILFRFGMX 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1735>:
TABLE-US-02098 a575.seq 1 ATGGTTTCGG GCGAGGAAGC CTTCAGGAAG
CCTGCCAGTC CGGAGGGTGA 51 GGCAGGTTTT GCGGAAGCTG TTTCTTCTGT
GCCGATATGG TTGTTTGAGG 101 GCAGGTTGTC GGAGAAATCG GTATCGACGG
TTTCCGGTTT GTTTTCGGCA 151 GTTTGGGCGA CAGATTCCGG TTCGGGCGTG
TCGATGACGA TTTCGACAGG 201 GTTGTACGGG TTGAAGGTCT CGGGCTCGTA
CACGCTGTCT GTGGATTCGA 251 TGGCGTTCCA ATCGGCATCC GCGCGTTTTT
GGGTTTCTTC ATCCTGCGTA 301 AGTGCGCCGG ATAAAATGCC GTTTTGCGCG
GCTGCCAGGC TGTCGAAATC 351 CAAGTCGATG CGGTTGGAAG GCGTATCGGT
TTCGACATCG AACGTTTGTT 401 TTGCCGACAA CTCTTCTTCA GATTCCCCAT
CTAAGGCAAG TGTGTCGTTT 451 ACATCGTTTT TCGGAGCGGG TTCGGGCGTT
GCCGGAGTTT CGACTTCGGC 501 AAAGGTGATT TCTATGCCGT CGTCTGCCGC
GTCGTCAAGG TCAGGCTCTT 551 CCTCAGGGAC GGATTCTTCG GTACGGCGCG
CGCGTTTGGA TTGGGCAAGG 601 CGCAAAAGCA GCAGCAGGGC GATCAATGCC
GCGCCTCCGC CGGCAAGCAG 651 CAAGGTGTAC GAACCGCCGA ACAGTCCGCT
TTCGGTTTCT TCTTCGGCAG 701 AAACCTGTTC GACAGGTTCG GAAACGGCGT
TACCGGTTTC GTCGGTCGGC 751 GTGTCGATGG CAGAAGCGGC GGCTTCTTGG
GGGGCGGATT CGGCAGCGGT 801 TTCCGATGCG GCAGTATTTG CAGCGGGTAC
AGGTTCGGGT CGAACGGCCG 851 GTTTTTCCGC TTTTGCTTCG GGCGCGGCAA
CTTTTGCTTC AGGTTTTTCA 901 ACCGGTTTCT CTACCGTTGC CTGTTTGGAC
GGTTCGGACG GCATGGATGC 951 GGTTTCGGCT TTGGGTTTCG CCGTTTGCGG
TTTGGGTTGT TCCGCTTTGA 1001 TCCTGTTCAG ATTCGGAATG TGA
This corresponds to the amino acid sequence <SEQ ID 1736; ORF
575.a>:
TABLE-US-02099 a575.pep 1 MVSGEEAFRK PASPEGEAGF AEAVSSVPIW
LFEGRLSEKS VSTVSGLFSA 51 VWATDSGSGV SMTISTGLYG LKVSGSYTLS
VDSMAFQSAS ARFWVSSSCV 101 SAPDKMPFCA AARLSKSKSM RLEGVSVSTS
NVCFADNSSS DSPSKASVSF 151 TSFFGAGSGV AGVSTSAKVI SMPSSAASSR
SGSSSGTDSS VRRARLDWAR 201 RKSSSRAINA APPPASSKVY EPPNSPLSVS
SSAETCSTGS ETALPVSSVG 251 VSMAEAAASW GADSAAVSDA AVFAAGTGSG
RTAGFSAFAS GAATFASGFS 301 TGFSTVACLD GSDGMDAVSA LGFAVCGLGC
SALILFRFGM * m575/a575 98.8% identity in 344 aa overlap 10 20 30 40
50 60 m575.pep
MVSGEEAFRKPASPEGEAGFAEAVSSVPIWLFEGRLSEKSVSTVSGLFSAVWATDSGSGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a575
MVSGEEAFRKPASPEGEAGFAEAVSSVPIWLFEGRLSEKSVSTVSGLFSAVWATDSGSGV 10 20
30 40 50 60 70 80 90 100 110 120 m575.pep
SMTISTGLYGLKVSGSYTLSVDSMAFQSASARFWVSSSCVSAPDKMPFCAAARLSKSKSM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a575
SMTISTGLYGLKVSGSYTLSVDSMAFQSASARFWVSSSCVSAPDKMPFCAAARLSKSKSM 70 80
90 100 110 120 130 140 150 160 170 180 m575.pep
RLEGVSVSTSNVCFADNSSSDSPSKASVSFTSFFGAGSGVAGVSTSAKVISMPSSAASSR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a575
RLEGVSVSTSNVCFADNSSSDSPSKASVSFTSFFGAGSGVAGVSTSAKVISMPSSAASSR 130
140 150 160 170 180 190 200 210 220 230 240 m575.pep
SGSSSGTDSSVRRARLDWARRKSSSRAINAAPPPASSKVYEPPNRPSNSPLSVSSSAETC
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| a575
SGSSSGTDSSVRRARLDWARRKSSSRAINAAPPPASSKVYEPPN----SPLSVSSSAETC 190
200 210 220 230 250 260 270 280 290 300 m575.pep
STGSETALPVSSVGVSMAEAAASWGADSAAVSDAAVFAAGTGSGRTAGFSAFASGAATFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a575
STGSETALPVSSVGVSMAEAAASWGADSAAVSDAAVFAAGTGSGRTAGFSAFASGAATFA 240
250 260 270 280 290 310 320 330 340 m575.pep
SGFSTGFSTVACLDGSDGMDAVSALGFAVCGLGCSALILFRFGMX
||||||||||||||||||||||||||||||||||||||||||||| a575
SGFSTGFSTVACLDGSDGMDAVSALGFAVCGLGCSALILFRFGMX 300 310 320 330
340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1737>:
TABLE-US-02100 g576.seq..(partial) 1 ..atgggcgtgg acatcggacg
ctccctgaaa caaatgaagg aacagggcgc 51 ggaaatcgat ttgaaagtct
ttaccgatgc catgcaggca gtgtatgacg 101 gcaaagaaat caaaatgacc
gaagagcagg cccaggaagt gatgatgaaa 151 ttcctgcagg agcagcaggc
taaagccgta gaaaaacaca aggcggatgc 201 gaaggccaac aaagaaaaag
gcgaagcctt cctgaaggaa aatgccgccg 251 aagacggcgt gaagaccact
gcttccggtc tgcagtacaa aatcaccaaa 301 cagggtgaag gcaaacagcc
gacaaaagac gacatcgtta ccgtggaata 351 cgaaggccgc ctgattgacg
gtaccgtatt cgacagcagc aaagccaacg 401 gcggcccggc caccttccct
ttgagccaag tgattccggg ttggaccgaa 451 ggcgtacggc ttctgaaaga
aggcggcgaa gccacgttct acatcccgtc 501 caaccttgcc taccgcgaac
agggtgcggg cgaaaaaatc ggtccgaacg 551 ccactttggt atttgacgtg
aaactggtca aaatcggcgc acccgaaaac 601 gcgcccgcca agcagccgga
tcaagtcgac atcaaaaaag taaattaa
This corresponds to the amino acid sequence <SEQ ID 1738; ORF
576.ng>:
TABLE-US-02101 g576.pep..(partial) 1 ..MGVDIGRSLK QMKEQGAEID
LKVFTDAMQA VYDGKEIKMT EEQAQEVMMK 51 FLQEQQAKAV EKHKADAKAN
KEKGEAFLKE NAAEDGVKTT ASGLQYKITK 101 QGEGKQPTKD DIVTVEYEGR
LIDGTVFDSS KANGGPATFP LSQVIPGWTE 151 GVRLLKEGGE ATFYIPSNLA
YREQGAGEKI GPNATLVFDV KLVKIGAPEN 201 APAKQPDQVD IKKVN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1739>:
TABLE-US-02102 m576.seq.. (partial) 1 ..ATGCAGCAGG CAAGCTATGC
GATGGGCGTG GACATCGGAC GCTCCCTGAA 51 GCAAATGAAG GAACAGGGCG
CGGAAATCGA TTTGAAAGTC TTTACCGAAG 101 CCATGCAGGC AGTGTATGAC
GGCAAAGAAA TCAAAATGAC CGAAGAGCAG 151 GCTCAGGAAG TCATGATGAA
ATTCCTTCAG GAACAACAGG CTAAAGCCGT 201 AGAAAAACAC AAGGCGGACG
CGAAGGCCAA TAAAGAAAAA GGCGAAGCCT 251 TTCTGAAAGA AAATGCCGCC
AAAGACGGCG TGAAGACCAC TGCTTCCGGC 301 CTGCAATACA AAATCACCAA
ACAGGGCGAA GGCAAACAGC CGACCAAAGA 351 CGACATCGTT ACCGTGGAAT
ACGAAGGCCG CCTGATTGAC GGTACGGTAT 401 TCGACAGCAG CAAAGCCAAC
GGCGGCCCGG TCACCTTCCC TTTGAGCCAA 451 GTGATTCCGG GTTGGACCGA
AGgCGTACAG CTTCTGAAAG AAGGCGGCGA 501 AGCCACGTTC TACATCCCGT
CCAACCTTGC CTACCGCGAA CAGGGTGCGG 551 GCGACAAAAT CGGTCCGAAC
GCCACTTTGG TATTTGATGT GAAACTGGTC 601 AAAATCGGCG CACCCGAAAA
CGCGCCCGCC AAGCAGCCGG CTCAAGTCGA 651 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 1740; ORF
576>:
TABLE-US-02103 m576.pep.. (partial) 1 ..MQQASYAMGV DIGRSLKQMK
EQGAEIDLKV FTEAMQAVYD GKEIKMTEEQ 51 AQEVMMKFLQ EQQAKAVEKH
KADAKANKEK GEAFLKENAA KDGVKTTASG 101 LQYKITKQGE GKQPTKDDIV
TVEYEGRLID GTVFDSSKAN GGPVTFPLSQ 151 VIPGWTEGVQ LLKEGGEATF
YIPSNLAYRE QGAGDKIGPN ATLVFDVKLV 201 KIGAPENAPA KQPAQVDIKK VN*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02104 m576/g576 97.2% identity in 215 aa overlap 10 20 30
40 50 60 m576.pep
MQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQ
|||||||||||||||||||||||||:||||||||||||||||||||||||||| g576
MGVDIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQEVMMKFLQ 10 20 30 40
50 70 80 90 100 110 120 m576.pep
EQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIV
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||| g576
EQQAKAVEKHKADAKANKEKGEAFLKENAAEDGVKTTASGLQYKITKQGEGKQPTKDDIV 60 70
80 90 100 110 130 140 150 160 170 180 m576.pep
TVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYRE
|||||||||||||||||||||||:|||||||||||||||:|||||||||||||||||||| g576
TVEYEGRLIDGTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEATFYIPSNLAYRE 120
130 140 150 160 170 190 200 210 220 m576.pep
QGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX
||||:|||||||||||||||||||||||||||| ||||||||| g576
QGAGEKIGPNATLVFDVKLVKIGAPENAPAKQPDQVDIKKVNX 180 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1741>:
TABLE-US-02105 a576.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCTGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGCCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 1742; ORF
576.a>:
TABLE-US-02106 a576.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VILGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN* m576/a576 99.5%
identity in 222 aa overlap 10 20 30 m576.pep
MQQASYAMGVDIGRSLKQMKEQGAEIDLKV |||||||||||||||||||||||||||||| a576
CGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKV 30 40
50 60 70 80 40 50 60 70 80 90 m576.pep
FTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
FTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAA 90 100
110 120 130 140 100 110 120 130 140 150 m576.pep
KDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
KDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQ 150
160 170 180 190 200 160 170 180 190 200 210 m576.pep
VIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPA ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a576
VILGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPA 210
220 230 240 250 260 220 m576.pep KQPAQVDIKKVNX ||||||||||||| a576
KQPAQVDIKKVNX 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1743>:
TABLE-US-02107 g576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTGCCGCG CAGGGCGACA
CCTCTTCAAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC AATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 ACAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGATG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCCCAGGAAG TGATGATGAA ATTCCTGCAG
GAGCAGCAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGATG CGAAGGCCAA
CAAAGAAAAA GGCGAAGCCT 401 TCCTGAAGGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGT 451 CTGCAGTACA AAATCACCAA ACAGGGTGAA
GGCAAACAGC CGACAAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACCGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
CCACCTTCCC TTTGAGCCAA 601 GTGATTCCGG GTTGGACCGA AGGCGTACGG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGAAAAAAT CGGTCCGAAC GCCACTTTGG
TATTTGACGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG ATCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 1744; ORF
576-1.ng>:
TABLE-US-02108 g576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASAA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTDAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPATFPLSQ 201 VIPGWTEGVR LLKEGGEATF YIPSNLAYRE
QGAGEKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPDQVDIKK VN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1745>:
TABLE-US-02109 m576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCCGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGTCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 1746; ORF
576-1>:
TABLE-US-02110 m576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VIPGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN* g576-1/m576-1
97.8% identity in 272 aa overlap 10 20 30 40 50 60 g576-1.pep
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDTSSIGSTMQQASYAMGV
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m576-1
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV 10 20
30 40 50 60 70 80 90 100 110 120 g576-1.pep
DIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| m576-1
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH 70 80
90 100 110 120 130 140 150 160 170 180 g576-1.pep
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID 130
140 150 160 170 180 190 200 210 220 230 240 g576-1.pep
GTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEATFYIPSNLAYREQGAGEKIGPN
|||||||||||||:|||||||||||||||:||||||||||||||||||||||||:||||| m576-1
GTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN 190
200 210 220 230 240 250 260 270 g576-1.pep
ATLVFDVKLVKIGAPENAPAKQPDQVDIKKVNX ||||||||||||||||||||||| |||||||||
m576-1 ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1747>:
TABLE-US-02111 a576-1.seq 1 ATGAACACCA TTTTCAAAAT CAGCGCACTG
ACCCTTTCCG CCGCTTTGGC 51 ACTTTCCGCC TGCGGCAAAA AAGAAGCCGC
CCCCGCATCT GCATCCGAAC 101 CTGCCGCCGC TTCTTCCGCG CAGGGCGACA
CCTCTTCGAT CGGCAGCACG 151 ATGCAGCAGG CAAGCTATGC GATGGGCGTG
GACATCGGAC GCTCCCTGAA 201 GCAAATGAAG GAACAGGGCG CGGAAATCGA
TTTGAAAGTC TTTACCGAAG 251 CCATGCAGGC AGTGTATGAC GGCAAAGAAA
TCAAAATGAC CGAAGAGCAG 301 GCTCAGGAAG TCATGATGAA ATTCCTTCAG
GAACAACAGG CTAAAGCCGT 351 AGAAAAACAC AAGGCGGACG CGAAGGCCAA
TAAAGAAAAA GGCGAAGCCT 401 TTCTGAAAGA AAATGCCGCC AAAGACGGCG
TGAAGACCAC TGCTTCCGGC 451 CTGCAATACA AAATCACCAA ACAGGGCGAA
GGCAAACAGC CGACCAAAGA 501 CGACATCGTT ACCGTGGAAT ACGAAGGCCG
CCTGATTGAC GGTACGGTAT 551 TCGACAGCAG CAAAGCCAAC GGCGGCCCGG
TCACCTTCCC TTTGAGCCAA 601 GTGATTCTGG GTTGGACCGA AGGCGTACAG
CTTCTGAAAG AAGGCGGCGA 651 AGCCACGTTC TACATCCCGT CCAACCTTGC
CTACCGCGAA CAGGGTGCGG 701 GCGACAAAAT CGGCCCGAAC GCCACTTTGG
TATTTGATGT GAAACTGGTC 751 AAAATCGGCG CACCCGAAAA CGCGCCCGCC
AAGCAGCCGG CTCAAGTCGA 801 CATCAAAAAA GTAAATTAA
This corresponds to the amino acid sequence <SEQ ID 1748; ORF
576-1.a>:
TABLE-US-02112 a576-1.pep 1 MNTIFKISAL TLSAALALSA CGKKEAAPAS
ASEPAAASSA QGDTSSIGST 51 MQQASYAMGV DIGRSLKQMK EQGAEIDLKV
FTEAMQAVYD GKEIKMTEEQ 101 AQEVMMKFLQ EQQAKAVEKH KADAKANKEK
GEAFLKENAA KDGVKTTASG 151 LQYKITKQGE GKQPTKDDIV TVEYEGRLID
GTVFDSSKAN GGPVTFPLSQ 201 VILGWTEGVQ LLKEGGEATF YIPSNLAYRE
QGAGDKIGPN ATLVFDVKLV 251 KIGAPENAPA KQPAQVDIKK VN* a576-1/m576-1
99.6% identity in 272 aa overlap 10 20 30 40 50 60 a576-1.pep
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDTSSIGSTMQQASYAMGV 10 20
30 40 50 60 70 80 90 100 110 120 a576-1.pep
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
DIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMMKFLQEQQAKAVEKH 70 80
90 100 110 120 130 140 150 160 170 180 a576-1.pep
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m576-1
KADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQPTKDDIVTVEYEGRLID 130
140 150 160 170 180 190 200 210 220 230 240 a576-1.pep
GTVFDSSKANGGPVTFPLSQVILGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| m576-1
GTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPN 190
200 210 220 230 240 250 260 270 a576-1.pep
ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX |||||||||||||||||||||||||||||||||
m576-1 ATLVFDVKLVKIGAPENAPAKQPAQVDIKKVNX 250 260 270
Expression of ORF 576
[0332] The primer described in Table 1 for ORF 576 was used to
locate and clone ORF 576. ORF 576 was cloned in pET and pGex
vectors and expressed in E. coli as above described. The products
of protein expression and purification were analyzed by SDS-PAGE.
FIG. 3A shows the results of affinity purification and FIG. 3B
shows the expression in E. coli. Purified His-fusion protein was
used to immunize mice, whose sera were used for ELISA (positive
result), FACS analysis (FIG. 3C), western blot (FIG. 3D). These
experiments confirm that ORF 576 is a surface-exposed protein and
that it is a useful immunogen. The hydrophilicity plots, antigenic
index, and amphipatic regions of ORF 576 are provided in FIG. 7.
The AMPHI program is used to predict putative T-cell epitopes (Gao
et al 1989, J. Immunol 143:3007; Roberts et al. 1996, AIDS Res
Human Retroviruses 12:593; Quakyi et al. 1992, Scand J Immunol
Suppl 11:9). The nucleic acid sequence of ORF 576 and the amino
acid sequence encoded thereby is provided in Example 1.
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1749>:
TABLE-US-02113 g577.seq.. 1 atggaaagga gcggtgtatt tggtaaaatt
gtcggcaatc gcatactccg 51 tatgccgtcc gaacacgctg ccgcattcta
tccgaaaccg tgcaaatcgt 101 ttaaactaac gcaatcttgg ttcagagtgc
gaagctgtcc gtgcggcgtt 151 tttatttacg gagcaaacat gaaacttatc
tataccgtca tcaaaatcat 201 tatcctgctg ctcttcctgc tgcttgccgt
cattaatatg gatgccgtta 251 ccttttccta tcttccgggg cagagtgtca
atctgccgct gattgtcgta 301 ttgttcggcg cgtttgtcgt cggcatcgtg
ttcggaatgt ttgccctgtt 351 cgggcggctg ctgtccttgc gcggcgaaaa
cagccgcctg cgtgcggaag 401 tgaagaaaag tgcgcgcttg agcggacaga
aattgactgc accgccgata 451 caaaatgctg ccgaatctgc caaacagcct taa
This corresponds to the amino acid sequence <SEQ ID 1750; ORF
577.ng>:
TABLE-US-02114 g577.pep 1 MERSGVFGKI VGNRILRMPS EHAAAFYPKP
CKSFKLTQSW FRVRSCPCGV 51 FIYGANMKLI YTVIKIIILL LFLLLAVINM
DAVTFSYLPG QSVNLPLIVV 101 LFGAFVVGIV FGMFALFGRL LSLRGENSRL
RAEVKKSARL SGQKLTAPPI 151 QNAAESAKQP *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1751>:
TABLE-US-02115 m577.seq.. 1 ATGGAAAGGA ACGGTGTATT TGGTAAAATT
GTCGGCAATC GCATACTCCG 51 TATGTCGTCC GAACACGCTG CCGCATCCTA
TCCGAAACCG TGCAAATCGT 101 TTAAACTAGC GCAATCTTGG TTCAGAGTGC
GAAGCTGTCT GGGCGGCGTT 151 TTTATTTACG GAGCAAACAT GAAACTTATC
TATACCGTCA TCAAAATCAT 201 TATCCTGCTG CTCTTCCTGC TGCTTGCCGT
CATTAATACG GATGCCGTTA 251 CCTTTTCCTA CCTGCCGGGG CAAAAATTCG
ATTTGCCGCT GATTGTCGTA 301 TTGTTCGGCG CATTTGTAGT CGGTATTATT
TTTGGAATGT TTGCCTTGTT 351 CGGACGGTTG TTGTCGTTAC GTGGCGAGAA
CGGCAGGTTG CGTGCCGAAG 401 TAAAGAAAAA TGCGCGTTTG ACGGGGAAGG
AGCTGACCGC ACCACCGGCG 451 CAAAATGCGC CCGAATCTAC CAAACAGCCT TAA
This corresponds to the amino acid sequence <SEQ ID 1752; ORF
577>:
TABLE-US-02116 m577.pep.. 1 MERNGVFGKI VGNRILRMSS EHAAASYPKP
CKSFKLAQSW FRVRSCLGGV 51 FIYGANMKLI YTVIKIIILL LFLLLAVINT
DAVTFSYLPG QKFDLPLIVV 101 LFGAFVVGII FGMFALFGRL LSLRGENGRL
RAEVKKNARL TGKELTAPPA 151 QNAPESTKQP *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02117 m577/g577 88.1% identity in 160 aa overlap 10 20 30
40 50 60 m577.pep
MERNGVFGKIVGNRILRMSSEHAAASYPKPCKSFKLAQSWFRVRSCLGGVFIYGANMKLI
|||:|||||||||||||| |||||| ||||||||||:||||||||| |||||||||||| g577
MERSGVFGKIVGNRILRMPSEHAAAFYPKPCKSFKLIQSWFRVRSCPCGVFIYGANMKLI 10 20
30 40 50 60 70 80 90 100 110 120 m577.pep
YTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVVLFGAFVVGIIFGMFALFGRL
||||||||||||||||||| |||||||||||: :|||||||||||||||:|||||||||| g577
YTVIKIIILLLFLLLAVINMDAVTFSYLPGQSVNLPLIVVLFGAFVVGIVFGMFALFGRL 70 80
90 100 110 120 130 140 150 160 m577.pep
LSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESTKQPX
|||||||:||||||||:|||:|::||||| ||| ||:|||| g577
LSLRGENSRLRAEVKKSARLSGQKLTAPPIQNAAESAKQPX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1753>:
TABLE-US-02118 a577.seq 1 ATGGAAAGGA ACGGTGTATT TGGTAAAATT
GTCGGCAATC GCATACTCCG 51 TATGTCGTCC GAACACGCTG CCGCATCCTA
TCCGAAACCG TGCAAATCGT 101 TTAAACTAGC GCAATCTTGG TTCAGAGTGC
GAAGCTGTCC GGGCGGCGTT 151 TTTATTTACG GAGCAAACAT GAAACTTATC
TATACCGTCA TCAAAATCAT 201 TATCCTGCTG CTCTTCCTGC TGCTTGCTGT
CATTAATACG GATGCCGTTA 251 CCTTTTCCTA CCTGCCGGGG CAAAAATTCG
ATTTGCCGCT GATTGTCGTA 301 TTGTTCGGCG CGTTTGTCGT CGGCATCGTG
TTCGGAATGT TTGCCTTGTT 351 CGGACGGTTG TTGTCGTTAC GTGGCGAGAA
CGGCAGGTTG CGTGCCGAAG 401 TAAAGAAAAA TGCGCGTTTG ACGGGGAAGG
AGCTGACCGC ACCACCGGCG 451 CAAAATGCGC CCGAATCTGC CAAACAGCCT TGA
This corresponds to the amino acid sequence <SEQ ID 1754; ORF
577.a>:
TABLE-US-02119 a577.pep 1 MERNGVFGKI VGNRILRMSS EHAAASYPKP
CKSFKLAQSW FRVRSCPGGV 51 FIYGANMKLI YTVIKIIILL LFLLLAVINT
DAVTFSYLPG QKFDLPLIVV 101 LFGAFVVGIV FGMFALFGRL LSLRGENGRL
RAEVKKNARL TGKELTAPPA 151 QNAPESAKQP * m577/a577 98.1% identity in
160 aa overlap 10 20 30 40 50 60 m577.pep
MERNGVFGKIVGNRILRMSSEHAAASYPKPCKSFKLAQSWFRVRSCLGGVFIYGANMKLI
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| a577
MERNGVFGKIVGNRILRMSSEHAAASYPKPCKSFKLAQSWFRVRSCPGGVFIYGANMKLI 10 20
30 40 50 60 70 80 90 100 110 120 m577.pep
YTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVVLFGAFVVGIIFGMFALFGRL
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| a577
YTVIKIIILLLFLLLAVINTDAVIFSYLPGQKFDLPLIVVLFGAFVVGIVFGMFALFGRL 70 80
90 100 110 120 130 140 150 160 m577.pep
LSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESTKQPX
||||||||||||||||||||||||||||||||||||:|||| a577
LSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAKQPX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1755>:
TABLE-US-02120 g578.seq.. 1 atgggaaagc tcgacatcgg gatattgttt
gccgatttct tcaaagattt 51 cgcgccacag ttcggtggtt tccaaaacgt
tggctttgcc tacggagcag 101 acttttttgc tgcgtttttg ggcggattgg
aaggccacgt gggcgatgcg 151 gcggatttcg ctttcgctgt atttcatggt
gttgtagcct tcgtgttcgc 201 cgttttccaa aacacggatg ccgcgcggtt
cgccgaaata aatatcgccg 251 gtaagttcgc gcacaatcaa aatatccaaa
ccggcaacga tttcaggctt 301 gagcgtggag gcgttggcta a
This corresponds to the amino acid sequence <SEQ ID 1756; ORF
578.ng>:
TABLE-US-02121 g578.pep 1 MGKLDIGILF ADFFKDFAPQ FGGFQNVGFA
YGADFFAAFL GGLEGHVGDA 51 ADFAFAVFHG VVAFVFAVFQ NTDAARFAEI
NIAGKFAHNQ NIQTGNDFRL 101 ERGGVG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1757>:
TABLE-US-02122 m578.seq.. 1 ATGGGAAAGC TCGACATCAG GGTACTCTTT
GCCGATTTCT TCAAAGATTT 51 CGCGCCACAA TTCGGTGGTT TCCAAAACGT
TGGCTTTGCC TACGGAACAG 101 ACTTTTTTGC TGCGTTTTTG GGCGGATTGG
AAGGCAACAT GGGCAATACG 151 GCGGATTTCG CTTTCGCTGT ATTTCATGGT
GTTGTAGCCT TCGCGTTCGC 201 CGTTTTCCAG AACGCGGATG CCGCGCGGTT
CGCCGAAATA GATGTCGCCG 251 GTGAGTTCGC GCACAATCAA AATATCCAAA
CCGGCAACGA TTTCAGGCTT
This corresponds to the amino acid sequence <SEQ ID 1758; ORF
578>:
TABLE-US-02123 m578.pep.. 1 MGKLDIRVLF ADFFKDFAPQ FGGFQNVGFA
YGTDFFAAFL GGLEGNMGNT 51 ADFAFAVFHG VVAFAFAVFQ NADAARFAEI
DVAGEFAHNQ NIQTGNDFRL 101 QRGGVG* m578/g578 87.7% identity in 106
aa overlap 10 20 30 40 50 60 m578.pep
MGKLDIRVLFADFFKDFAPQFGGFQNVGFAYGTDFFAAFLGGLEGNMGNTADFAFAVFHG ||||||
:||||||||||||||||||||||||:||||||||||||::|::|||||||||| g578
MGKLDIGILFADFFKDFAPQFGGFQNVGFAYGADFFAAFLGGLEGHVGDAADFAFAVFHG 10 20
30 40 50 60 70 80 90 100 m578.pep
VVAFAFAVFQNADAARFAEIDVAGEFAHNQNIQTGNDFRLQRGGVGX
||||:||||||:||||||||::||:|||||||||||||||:|||||| g578
VVAFVFAVFQNTDAARFAEINIAGKFAHNQNIQTGNDFRLERGGVGX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1759>:
TABLE-US-02124 a578.seq 1 ATGGGAAAGC TCGACATCAG GGTATTCTTT
GCCGATTTCT TCAAAGATTT 51 CGCGCCACAA TTCGGTGGTT TCCAAAACGT
TGGCTTTGCC TACGGAGCAG 101 ACTTTTTTGC TGCGTTTTTG GGCGGATTGG
AAGGCGACGT GGGCAATACG 151 GCGGATTTCG CTTTCGCTGT ATTTCATGGT
GTTGTAGCCT TCGCGTTCGC 201 CGTTTTCCAG AACACGGATG CCGCGCGGTT
CGCCGAAATA AATATCGCCG 251 GTGAGTTCGC GCACAATCAA AATATCCAAA
CCCGCAACGA TTTCAGACTT 301 GAGCGTGGAG GCGTTGGCTA G
This corresponds to the amino acid sequence <SEQ ID 1760; ORF
578.a>:
TABLE-US-02125 a578.pep 1 MGKLDIRVFF ADFFKDFAPQ FGGFQNVGFA
YGADFFAAFL GGLEGDVGNT 51 ADFAFAVFHG VVAFAFAVFQ NTDAARFAEI
NIAGEFAHNQ NIQTRNDFRL 101 ERGGVG* m578/a578 91.5% identity in 106
aa overlap 10 20 30 40 50 60 m578.pep
MGKLDIRVLFADFFKDFAPQFGGFQNVGFAYGTDFFAAFLGGLEGNMGNTADFAFAVFHG
||||||||:|||||||||||||||||||||||:||||||||||||::||||||||||||| a578
MGKLDIRVFFADFFKDFAPQFGGFQNVGFAYGADFFAAFLGGLEGDVGNTADFAFAVFHG 10 20
30 40 50 60 70 80 90 100 m578.pep
VVAFAFAVFQNADAARFAEIDVAGEFAHNQNIQTGNDFRLQRGGVGX
|||||||||||:||||||||::|||||||||||| |||||:|||||| a578
VVAFAFAVFQNTDAARFAEINIAGEFAHNQNIQTRNDFRLERGGVGX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1761>:
TABLE-US-02126 g579.seq.. 1 ATGAGGGCGG CGATGACGCG CGCGCAGGTC
GATGCCACGC TGATTAGTTT 51 TTTGTGTAAT GTTGCCAATA TCGGCTTATT
GATTTTGGTG ATTATTGCCG 101 CATTGGGACG GTTGGGCGTT TCCACAACAT
CCGTAACCGC CTTAATCGGC 151 GGCGCGGGTT TGGCGGTGGC GTTGTCCTTA
AAAGACCAGC TGTCCAATTT 201 TGCCGCCGGC GCGCTGATTA TCCTGTTCCG
CCCGTTCAAA GTCGGCGACT 251 TTATCCGTGT CGGCGGTTTT GAAGGATATG
TCCGGGAAAT CAAAATGGTG 301 CAGACTTCTT TGCGGACGAC CGACAACGAA
GAAGTCGTGC TGCCCAACAG 351 CGTGGTGATG GGCAACAGCA TCGTCAACCG
TTCCAGCCTG CCGCTTTGCC 401 GCGCCCAAGT GATAGTCGGC GTCGATTACA
ACTGCGATTT GAAAGTGGCG 451 AAAGAGGCGG TGTTGAAAGC CGCCGCCGAA
CACCCCTTGA GCGTTCAAAA 501 CGAAGAGCGG CAGCCCGCCG CCTACATCAC
CGCCTTGGGC GACAATGCCA 551 TCGAAATCAC ATTATGGGCT TGGGCAAACG
AAGCAGACCG CTGGACGCTG 601 CAATGCGACT TGAACGAACA AGTGGTCGAA
AACCTCCGCA AAGTCAATAT 651 CAACATCCCG TTCCCGCAAC GCGACATACA
CATCATCAAT TCTTAA
This corresponds to the amino acid sequence <SEQ ID 1762; ORF
579.ng>:
TABLE-US-02127 g579.pep.. 1 MRAAMTRAQV DATLISFLCN VANIGLLILV
IIAALGRLGV STTSVTALIG 51 GAGLAVALSL KDQLSNFAAG ALIILFRPFK
VGDFIRVGGF EGYVREIKMV 101 QTSLRTTDNE EVVLPNSVVM GNSIVNRSSL
PLCRAQVIVG VDYNCDLKVA 151 KEAVLKAAAE HPLSVQNEER QPAAYITALG
DNAIEITLWA WANEADRWTL 201 QCDLNEQVVE NLRKVNINIP FPQRDIHIIN S*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1763>:
TABLE-US-02128 m579.seq.. 1 ATGAGGGCGG CGATGACGCG CGCGCAGGTC
GATGCCACGC TGATTAGTTT 51 TTTGTGTAAT GTTGCCAATA TCGGCTTATT
GATTTTGGTG ATTATTGCCG 101 CATTGGGCAG ATTGGGCGTT TCCACAACAT
CCGTAACCGC CTTAATCGGC 151 GGCGCGGGTT TGGCGGTGGC GTTGTCCCTG
AAAGACCAGC TGTCCAATTT 201 TGCCGCCGGC GCACTGATTA TCCTGTTCCG
CCCGTTCAAA GTCGGCGATT 251 TTATCCGCGT CGGCGGTTTT GAAGGATATG
TCCGAGAGAT TAAAATGGTG 301 CAGACTTCTT TGCGGACGAC CGACAACGAA
GAAGTCGTGC TGCCCAACAG 351 CGTGGTGATG GGCAACAGCA TCGTCAACCG
TTCCACACTG CCGCTGTGCC 401 GCGCCCAAGT GATAGTCGGC GTCGATTACA
ACTGCGATTT GAAAGTGGCG 451 AAAGAGGCGG TGTTGAAAGC CGCCGTCGAA
CACCCCTTGA GCGTTCAAAA 501 CGAAGAGCGG CAGGCTGCCG CCTACATCAC
CGCCTTGGGC GACAATGCCA 551 TCGAAATCAC ATTATGGGCT TGGGCAAACG
AAGCAGACCG CTGGACGCTG 601 CAATGCGACT TGAACGAACA AGTGGTCGAA
AACCTCCGCA AAGTCAATAT 651 CAACATCCCG TTCCCGCAAC GCGACATACA
CATCATCAAT TCTTAA
This corresponds to the amino acid sequence <SEQ ID 1764; ORF
579>:
TABLE-US-02129 m579.pep.. 1 MRAAMTRAQV DATLISFLCN VANIGLLILV
IIAALGRLGV STTSVTALIG 51 GAGLAVALSL KDQLSNFAAG ALIILFRPFK
VGDFIRVGGF EGYVREIKMV 101 QTSLRTTDNE EVVLPNSVVM GNSIVNRSTL
PLCRAQVIVG VDYNCDLKVA 151 KEAVLKAAVE HPLSVQNEER QAAAYITALG
DNAIEITLWA WANEADRWTL 201 QCDLNEQVVE NLRKVNINIP FPQRDIHIIN S*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02130 m579/g579 98.7% identity in 231 aa overlap 10 20 30
40 50 60 m579.pep
MRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g579
MRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSL 10 20
30 40 50 60 70 80 90 100 110 120 m579.pep
KDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g579
KDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVM 70 80
90 100 110 120 130 140 150 160 170 180 m579.pep
GNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALG
||||||||:|||||||||||||||||||||||||||||:|||||||||||| |||||||| g579
GNSIVNRSSLPLCRAQVIVGVDYNCDLKVAKEAVLKAAAEHPLSVQNEERQPAAYITALG 130
140 150 160 170 180 190 200 210 220 230 m579.pep
DNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX
|||||||||||||||||||||||||||||||||||||||||||||||||||| g579
DNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1765>:
TABLE-US-02131 a579.seq 1 ATGAGGGCGG CGATGACGCG CGCGCAGGTC
GATGCCACGC TGATTAGTTT 51 TTTGTGTAAT GTTGCCAATA TCGGCTTATT
GATTTTGGTG ATTATTGCCG 101 CATTGGGCAG ATTGGGCGTT TCCACAACAT
CCGTAACCGC CTTAATCGGC 151 GGCGCGGGTT TGGCGGTGGC GTTGTCCTTG
AAAGACCAGC TGTCCAATTT 201 TGCCGCCGGC GCGCTGATTA TCCTGTTCCG
CCCGTTCAAA GTCGGCGATT 251 TTATCCGCGT CGGCGGTTTT GAAGGATATG
TCCGAGAGAT TAAAATGGTG 301 CAGACTTCTT TGCGGACGAC CGACAACGAA
GAAGTCGTGC TGCCCAACAG 351 CGTGGTGATG GGCAACAGCA TCGTCAACCG
TTCCACACTG CCGCTGTGCC 401 GCGCCCAAGT GATAGTCGGC GTCGATTACA
ACTGCGATTT GAAAGTGGCG 451 AAAGAGGCGG TGTTGAAAGC CGCCGTCGAA
CACCCCTTGA GCGTTCAAAA 501 CGAAGAGCGG CAGGCCGCCG CCTACATCAC
CGCCTTGGGC GACAATGCCA 551 TCGAAATCAC ATTATGGGCT TGGGCAAACG
AAGCAGACCG CTGGACGCTG 601 CAATGCGACT TGAACGAACA AGTGGTCGAA
AACCTCCGCA AAGTCAATAT 651 CAACATCCCG TTCCCGCAAC GCGACATACA
CATCATCAAT TCTTAA
This corresponds to the amino acid sequence <SEQ ID 1766; ORF
579.a>:
TABLE-US-02132 a579.pep 1 MRAAMTRAQV DATLISFLCN VANIGLLILV
IIAALGRLGV STTSVTALIG 51 GAGLAVALSL KDQLSNFAAG ALIILFRPFK
VGDFIRVGGF EGYVREIKMV 101 QTSLRTTDNE EVVLPNSVVM GNSIVNRSTL
PLCRAQVIVG VDYNCDLKVA 151 KEAVLKAAVE HPLSVQNEER QAAAYITALG
DNAIEITLWA WANEADRWTL 201 QCDLNEQVVE NLRKVNINIP FPQRDIHIIN S*
m579/a579 100.0% identity in 231 aa overlap 10 20 30 40 50 60
m579.pep
MRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a579
MRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSL 10 20
30 40 50 60 70 80 90 100 110 120 m579.pep
KDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a579
KDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTIDNEEVVLPNSVVM 70 80
90 100 110 120 130 140 150 160 170 180 m579.pep
GNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a579
GNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALG 130
140 150 160 170 180 190 200 210 220 230 m579.pep
DNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX
|||||||||||||||||||||||||||||||||||||||||||||||||||| a579
DNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1767>:
TABLE-US-02133 g579-1.seq 1 ATGGACTTCA AACAATTTGA TTTTTTACAC
CTGATCAGTG TTTCCGGTTG 51 GGGGCATCTG GCTGAAAAGG CGTGGGCGTT
CGGGCTGAAC CTTGCCGCCG 101 CGCTGCTTAT TTTCTTGGTC GGGAAATGGG
CGGCGAAACG CATTGTCGCC 151 GTAATGAGGG CGGCGATGAC GCGCGCGCAG
GTCGATGCCA CGCTGATTAG 201 TTTTTTGTGT AATGTTGCCA ATATCGGCTT
ATTGATTTTG GTGATTATTG 251 CCGCATTGGG ACGGTTGGGC GTTTCCACAA
CATCCGTAAC CGCCTTAATC 301 GGCGGCGCGG GTTTGGCGGT GGCGTTGTCC
TTAAAAGACC AGCTGTCCAA 351 TTTTGCCGCC GGCGCGCTGA TTATCCTGTT
CCGCCCGTTC AAAGTCGGCG 401 ACTTTATCCG TGTCGGCGGT TTTGAAGGAT
ATGTCCGGGA AATCAAAATG 451 GTGCAGACTT CTTTGCGGAC GACCGACAAC
GAAGAAGTCG TGCTGCCCAA 501 CAGCGTGGTG ATGGGCAACA GCATCGTCAA
CCGTTCCAGC CTGCCGCTTT 551 GCCGCGCCCA AGTGATAGTC GGCGTCGATT
ACAACTGCGA TTTGAAAGTG 601 GCGAAAGAGG CGGTGTTGAA AGCCGCCGCC
GAACACCCCT TGAGCGTTCA 651 AAACGAAGAG CGGCAGCCCG CCGCCTACAT
CACCGCCTTG GGCGACAATG 701 CCATCGAAAT CACATTATGG GCTTGGGCAA
ACGAAGCAGA CCGCTGGACG 751 CTGCAATGCG ACTTGAACGA ACAAGTGGTC
GAAAACCTCC GCAAAGTCAA 801 TATCAACATC CCGTTCCCGC AACGCGACAT
ACACATCATC AATTCTTAA
This corresponds to the amino acid sequence <SEQ ID 1768; ORF
008.ng>:
TABLE-US-02134 g579-1.pep 1 MDFKQFDFLH LISVSGWGHL AEKAWAFGLN
LAAALLIFLV GKWAAKRIVA 51 VMRAAMTRAQ VDATLISFLC NVANIGLLIL
VIIAALGRLG VSTTSVTALI 101 GGAGLAVALS LKDQLSNFAA GALIILFRPF
KVGDFIRVGG FEGYVREIKM 151 VQTSLRTTDN EEVVLPNSVV MGNSIVNRSS
LPLCRAQVIV GVDYNCDLKV 201 AKEAVLKAAA EHPLSVQNEE RQPAAYITAL
GDNAIEITLW AWANEADRWT 251 LQCDLNEQVV ENLRKVNINI PFPQRDIHII NS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1769>:
TABLE-US-02135 m579-1.seq 1 ATGGACTTCA AACAATTTGA TTTTTTACAC
CTGATCAGTG TTTCCGGTTG 51 GGAGCATCTG GCTGAAAAGG CGTGGGCGTT
CGGGCTGAAC CTTGCCGCCG 101 CGCTGCTTAT TTTTTTGGTC GGAAAATGGG
CGGCGAAACG CATTGTCGCT 151 GTGATGAGGG CGGCGATGAC GCGCGCGCAG
GTCGATGCCA CGCTGATTAG 201 TTTTTTGTGT AATGTTGCCA ATATCGGCTT
ATTGATTTTG GTGATTATTG 251 CCGCATTGGG CAGATTGGGC GTTTCCACAA
CATCCGTAAC CGCCTTAATC 301 GGCGGCGCGG GTTTGGCGGT GGCGTTGTCC
CTGAAAGACC AGCTGTCCAA 351 TTTTGCCGCC GGCGCACTGA TTATCCTGTT
CCGCCCGTTC AAAGTCGGCG 401 ATTTTATCCG CGTCGGCGGT TTTGAAGGAT
ATGTCCGAGA GATTAAAATG 451 GTGCAGACTT CTTTGCGGAC GACCGACAAC
GAAGAAGTCG TGCTGCCCAA 501 CAGCGTGGTG ATGGGCAACA GCATCGTCAA
CCGTTCCACA CTGCCGCTGT 551 GCCGCGCCCA AGTGATAGTC GGCGTCGATT
ACAACTGCGA TTTGAAAGTG 601 GCGAAAGAGG CGGTGTTGAA AGCCGCCGTC
GAACACCCCT TGAGCGTTCA 651 AAACGAAGAG CGGCAGGCTG CCGCCTACAT
CACCGCCTTG GGCGACAATG 701 CCATCGAAAT CACATTATGG GCTTGGGCAA
ACGAAGCAGA CCGCTGGACG 751 CTGCAATGCG ACTTGAACGA ACAAGTGGTC
GAAAACCTCC GCAAAGTCAA 801 TATCAACATC CCGTTCCCGC AACGCGACAT
ACACATCATC AATTCTTAA
This corresponds to the amino acid sequence <SEQ ID 1770; ORF
579-1>:
TABLE-US-02136 m579-1.pep 1 MDFKQFDFLH LISVSGWEHL AEKAWAFGLN
LAAALLIFLV GKWAAKRIVA 51 VMRAAMTRAQ VDATLISFLC NVANIGLLIL
VIIAALGRLG VSTTSVTALI 101 GGAGLAVALS LKDQLSNFAA GALIILFRPF
KVGDFIRVGG FEGYVREIKM 151 VQTSLRTTDN EEVVLPNSVV MGNSIVNRST
LPLCRAQVIV GVDYNCDLKV 201 AKEAVLKAAV EHPLSVQNEE RQAAAYITAL
GDNAIEITLW AWANEADRWT 251 LQCDLNEQVV ENLRKVNINI PFPQRDIHII NS*
m579-1/g579-1 98.6% identity in 282 aa overlap 10 20 30 40 50 60
m579-1.pep
MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWAAKRIVAVMRAAMTRAQ
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| g579-1
MDFKQFDFLHLISVSGWGHLAEKAWAFGLNLAAALLIFLVGKWAAKRIVAVMRAAMTRAQ 10 20
30 40 50 60 70 80 90 100 110 120 m579-1.pep
VDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSLKDQLSNFAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g579-1
VDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSLKDQLSNFAA 70 80
90 100 110 120 130 140 150 160 170 180 m579-1.pep
GALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVMGNSIVNRST
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g579-1
GALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVMGNSIVNRSS 130
140 150 160 170 180 190 200 210 220 230 240 m579-1.pep
LPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALGDNAIEITLW
|||||||||||||||||||||||||||||:|||||||||||| ||||||||||||||||| g579-1
LPLCRAQVIVGVDYNCDLKVAKEAVLKAAAEHPLSVQNEERQPAAYITALGDNAIEITLW 190
200 210 220 230 240 250 260 270 280 m579-1.pep
AWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX
||||||||||||||||||||||||||||||||||||||||||| g579-1
AWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX 250 260 270 280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1771>:
TABLE-US-02137 a579-1.seq 1 ATGGACTTCA AACAATTTGA TTTTTTACAC
CTGATAAGTG CTTCCGGCTG 51 GGAGCATCTG GCTGAAAAGG CGTGGGCGTT
CGGGCTGAAC CTTGCCGCCG 101 CGCTGCTTAT TTTTTTGGTC GGAAAATGGG
CGGCGAAACG CATTGTCGCC 151 GTGATGAGGG CGGCGATGAC GCGCGCGCAG
GTCGATGCCA CGCTGATTAG 201 TTTTTTGTGT AATGTTGCCA ATATCGGCTT
ATTGATTTTG GTGATTATTG 251 CCGCATTGGG CAGATTGGGC GTTTCCACAA
CATCCGTAAC CGCCTTAATC 301 GGCGGCGCGG GTTTGGCGGT GGCGTTGTCC
TTGAAAGACC AGCTGTCCAA 351 TTTTGCCGCC GGCGCGCTGA TTATCCTGTT
CCGCCCGTTC AAAGTCGGCG 401 ATTTTATCCG CGTCGGCGGT TTTGAAGGAT
ATGTCCGAGA GATTAAAATG 451 GTGCAGACTT CTTTGCGGAC GACCGACAAC
GAAGAAGTCG TGCTGCCCAA 501 CAGCGTGGTG ATGGGCAACA GCATCGTCAA
CCGTTCCACA CTGCCGCTGT 551 GCCGCGCCCA AGTGATAGTC GGCGTCGATT
ACAACTGCGA TTTGAAAGTG 601 GCGAAAGAGG CGGTGTTGAA AGCCGCCGTC
GAACACCCCT TGAGCGTTCA 651 AAACGAAGAG CGGCAGGCCG CCGCCTACAT
CACCGCCTTG GGCGACAATG 701 CCATCGAAAT CACATTATGG GCTTGGGCAA
ACGAAGCAGA CCGCTGGACG 751 CTGCAATGCG ACTTGAACGA ACAAGTGGTC
GAAAACCTCC GCAAAGTCAA 801 TATCAACATC CCGTTCCCGC AACGCGACAT
ACACATCATC AATTCTTAA
This corresponds to the amino acid sequence <SEQ ID 1772; ORF
579-1.a>:
TABLE-US-02138 a579-1.pep 1 MDFKQFDFLH LISASGWEHL AEKAWAFGLN
LAAALLIFLV GKWAAKRIVA 51 VMRAAMTRAQ VDATLISFLC NVANIGLLIL
VIIAALGRLG VSTTSVTALI 101 GGAGLAVALS LKDQLSNFAA GALIILFRPF
KVGDFIRVGG FEGYVREIKM 151 VQTSLRTTDN EEVVLPNSVV MGNSIVNRST
LPLCRAQVIV GVDYNCDLKV 201 AKEAVLKAAV EHPLSVQNEE RQAAAYITAL
GDNAIEITLW AWANEADRWT 251 LQCDLNEQVV ENLRKVNINI PFPQRDIHII NS*
a579-1/m579-1 99.6% identity in 282 aa overlap 10 20 30 40 50 60
a579-1.pep
MDFKQFDFLHLISASGWEHLAEKAWAFGLNLAAALLIFLVGKWAAKRIVAVMRAAMTRAQ
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| m579-1
MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWAAKRIVAVMRAAMTRAQ 10 20
30 40 50 60 70 80 90 100 110 120 a579-1.pep
VDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSLKDQLSNFAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m579-1
VDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGGAGLAVALSLKDQLSNFAA 70 80
90 100 110 120 130 140 150 160 170 180 a579-1.pep
GALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVMGNSIVNRST
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m579-1
GALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDNEEVVLPNSVVMGNSIVNRST 130
140 150 160 170 180 190 200 210 220 230 240 a579-1.pep
LPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALGDNAIEITLW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m579-1
LPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQNEERQAAAYITALGDNAIEITLW 190
200 210 220 230 240 250 260 270 280 a579-1.pep
AWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX
||||||||||||||||||||||||||||||||||||||||||| m579-1
AWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRDIHIINSX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1773>:
TABLE-US-02139 g580.seq 1 atggattcgc ccaaggtcgg gtgcgggtgg
atggttttgc cgatgtctgc 51 cgcgtcgcag cccatttcga tggcaaggca
gacttcgccg atcatgtcgc 101 caccgttcgg accgacaatg ccgccgccga
tgatgcggcc ggtttcggca 151 tcgaaaatca gcttggtaaa gccgttgtcg
caaccgttgg caatcgcacg 201 accggaagcc gcccatggga agttggcttt
ggtaattttg cggcctgatg 251 ctttggcaga caattcggtt tcaccgaccc
atgccacttc gggggaagtg 301 tag
This corresponds to the amino acid sequence <SEQ ID 1774; ORF
580.ng>:
TABLE-US-02140 g580.pep.. 1 MDSPKVGCGW MVLPMSAASQ PISMARQTSP
IMSPPFGPTM PPPMMRPVSA 51 SKISLVKPLS QPLAIARPEA AHGKLALVIL
RPDALADNSV SPTHATSGEV 101 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1775>:
TABLE-US-02141 m580.seq.. 1 ATGGATTCGC CCAAGGTCGG GTGCGGGTGG
ATGGTTTTGC CGATGTCTGC 51 CGCGTCGCAG CCCATTTCGA TGGCAAGGCA
GACTTCGCCG ATCATATCGC 101 CACCGTTCGG ACCGACAATG CCGCCGCCGA
TGATGCGGCC GGTTTCGGCA 151 TCAAAAATCA GCTTGGTAAA GCCGTTGTCG
CAACCGTTGG CAATCGCACG 201 GCCGGAAGCC GCCCACGGGA AGTTGGCTTT
GGTGATTTTG CGGCCGGAGG 251 CTTTGGCGGA CAGTTCGGTT TCGCCCACCC
ACGCCACTTC GGGGGAAGTG 301 TAG
This corresponds to the amino acid sequence <SEQ ID 1776; ORF
580>:
TABLE-US-02142 m580.pep.. 1 MDSPKVGCGW MVLPMSAASQ PISMARQTSP
IISPPFGPTM PPPMMRPVSA 51 SKISLVKPLS QPLAIARPEA AHGKLALVIL
RPEALADSSV SPTHATSGEV 101 * m580/g580 97.0% identity in 100 aa
overlap 10 20 30 40 50 60 m580.pep
MDSPKVGCGWMVLPMSAASQPISMARQTSPIISPPFGPTMPPPMMRPVSASKISLVKPLS
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| g580
MDSPKVGCGWMVLPMSAASQPISMARQTSPIMSPPFGPTMPPPMMRPVSASKISLVKPLS 10 20
30 40 50 60 70 80 90 100 m580.pep
QPLAIARPEAAHGKLALVILRPEALADSSVSPTHATSGEVX
||||||||||||||||||||||:||||:||||||||||||| g580
QPLAIARPEAAHGKLALVILRPDALADNSVSPTHATSGEVX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1777>:
TABLE-US-02143 a580.seq 1 ATGGATTCGC CCAAGGTCGG GTGCGGGTGG
ATGGTTTTGC CGATGTCTGC 51 CGCGTCGCAG CCCATTTCGA TGGCAAGGCA
GACTTCGCCG ATCATGTCGC 101 CACCGTTCGG ACCGACAATG CCGCCGCCGA
TGATGCGGCC GGTTTCAGCA 151 TCAAAAATCA GCTTGGTGAA ACCATTGTCG
CAACCGTTGG CAATCGCACG 201 GCCGGAAGCA GCCCATGGGA AGTTGGCTTT
GGTGATTTTG CGGCCGGAGG 251 CTTTGGCAGA CAATTCGGTT TCGCCCACCC
ATGCCACTTC AGGAGAAGTG 301 TAA
This corresponds to the amino acid sequence <SEQ ID 1778; ORF
580.a>:
TABLE-US-02144 a580.pep 1 MDSPKVGCGW MVLPMSAASQ PISMARQTSP
IMSPPFGPTM PPPMMRPVSA 51 SKISLVKPLS QPLAIARPEA AHGKLALVIL
RPEALADNSV SPTHATSGEV 101 * m580/a580 98.0% identity in 100 aa
overlap 10 20 30 40 50 60 m580.pep
MDSPKVGCGWMVLPMSAASQPISMARQTSPIISPPFGPTMPPPMMRPVSASKISLVKPLS
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a580
MDSPKVGCGWMVLPMSAASQPISMARQTSPIMSPPFGPIMPPPMMRPVSASKISLVKPLS 10 20
30 40 50 60 70 80 90 100 m580.pep
QPLAIARPEAAHGKLALVILRPEALADSSVSPTHATSGEVX
||||||||||||||||||||||:||||:||||||||||||| a580
QPLAIARPEAAHGKLALVILRPEALADNSVSPTHATSGEVX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1779>:
TABLE-US-02145 g581.seq.. 1 atgcacttcg cccagcttgt gggtcaaacc
ggtatagaac aaaatacgtt 51 ctgtcgtcgt ggttttaccc gcatcgatat
gggcggaaat accgatgttg 101 cggtacaggc tgatcggggt cttacgagcc
attttattag cctttcaaaa 151 ttagaaacgg aagtgagaga atgctttgtt
ggcttcagcc atacggtgta 201 cttcttcacg ttttttcaac gcaccgccac
ggccttcgga cgcatcaatc 251 aactcgcctg ccaaacgcag atccatggat
ttctcaccac gtttgcgggc 301 cgcgtcgcga acccaacgca ttgccaaagc
cagacggcgt ga
This corresponds to the amino acid sequence <SEQ ID 1780; ORF
581.ng>:
TABLE-US-02146 g581.pep.. 1 MHFAQLVGQT GIEQNTFCRR GFTRIDMGGN
TDVAVQADRG LTSHFISLSK 51 LETEVRECFV GFSHTVYFFT FFQRTATAFG
RINQLACQTQ IHGFLTTFAG 101 RVANPTHCQS QTA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1781>:
TABLE-US-02147 m581.seq.. 1 ATGCACTTCG CCCAGCTTGT GGGTCAAACC
GGTATAGAAC AAAATACGTT 51 CTGTCGTCGT GGTTTTACCC GCGTCAATAT
GGGCGGAAAT ACCGATGTTA 101 CGGTACAGGC TGATCGGGGT CTTACGAGCC
ATTTTATTAG CCTTTCAAAA 151 TTAGAAACGG AAGTGAGAGA ATGCTTTGTT
GGCTTCAGCC ATACGGTGTA 201 CTTCTTCACG TTTTTTCAAC GCACCGCCAC
GGCCTTCGGA CGCATCAATC 251 AATTCGCCTG CCAAACGCAG GTCCATGGAT
TTCTCACCAC GTTTGCGGGC 301 CGCATCGCGA ACCCAGCGCA TTGCCAAAGC
CAAACGGCGT GA
This corresponds to the amino acid sequence <SEQ ID 1782; ORF
581>:
TABLE-US-02148 m581.pep.. 1 MHFAQLVGQT GIEQNTFCRR GFTRVNMGGN
TDVTVQADRG LTSHFISLSK 51 LETEVRECFV GFSHTVYFFT FFQRTATAFG
RINQFACQTQ VHGFLTTFAG 101 RIANPAHCQS QTA* m581/g581 93.8% identity
in 113 aa overlap 10 20 30 40 50 60 m581.pep
MHFAQLVGQTGIEQNTFCRRGFTRVNMGGNTDVTVQADRGLTSHFISLSKLETEVRECFV
||||||||||||||||||||||||::|||||||:|||||||||||||||||||||||||| g581
MHFAQLVGQTGIEQNTFCRRGFTRIDMGGNTDVAVQADRGLTSHFISLSKLETEVRECFV 10 20
30 40 50 60 70 80 90 100 110 m581.pep
GFSHTVYFFTFFQRTATAFGRINQFACQTQVHGFLTTFAGRIANPAHCQSQTAX
||||||||||||||||||||||||:|||||:||||||||||:|||:|||||||| g581
GFSHTVYFFTFFQRTATAFGRINQLACQTQIHGFLTTFAGRVANPTHCQSQTAX 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1783>:
TABLE-US-02149 a581.seq 1 ATGCACTTCG CCCAGCTTGT GGGTCAAACC
GGTATAGAAC AAAATACGTT 51 CTGTCGTCGT GGTTTTACCC GCATCGATAT
GGGCGGAAAT ACCGATGTTA 101 CGGTACAGGC TGATCGGGGT CTTACGAGCC
ATTTTATTAG CCTTTCAAAA 151 TTAGAAACGG AAGTGAGAGA ATGCTTTGTT
GGCTTCAGCC ATACGGTGTA 201 CTTCTTCACG TTTTTTCAAC GCACCGCCAC
GGCCTTCGGA CGCATCAATC 251 AATTCGCCTG CCAAACGCAG GTCCATGGAT
TTCTCACCAC GTTTGCGGGC 301 CGCATCGCGA ACCCAGCGCA TTGCCAAAGC
CAAACGGCGT GA
This corresponds to the amino acid sequence <SEQ ID 1784; ORF
581.a>:
TABLE-US-02150 a581.pep 1 MHFAQLVGQT GIEQNTFCRR GFTRIDMGGN
TDVTVQADRG LTSHFISLSK 51 LETEVRECFV GFSHTVYFFT FFQRTATAFG
RINQFACQTQ VHGFLTTFAG 101 RINPAHCQS QTA* m581/a581 98.2% identity
in 113 aa overlap 10 20 30 40 50 60 m581.pep
MHFAQLVGQTGIEQNTFCRRGFTRVNMGGNTDVTVQADRGLTSHFISLSKLETEVRECFV
||||||||||||||||||||||||::|||||||||||||||||||||||||||||||||| a581
MHFAQLVGQTGIEQNTFCRRGFTRIDMGGNTDVTVQADRGLTSHFISLSKLETEVRECFV 10 20
30 40 50 60 70 80 90 100 110 m581.pep
GFSHTVYFFTFFQRTATAFGRINQFACQTQVHGFLTTFAGRIANPAHCQSQTAX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a581
GFSHTVYFFTFFQRTATAFGRINQFACQTQVHGFLTTFAGRIANPAHCQSQTAX 70 80 90 100
110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1785>:
TABLE-US-02151 g582.seq.. 1 atgcgctata ttcttttgac aggactgttg
ccgacggcat ccgcttttgg 51 agagaccgcg ctgcaatgcg ccgctttgac
ggacaatgtt acgcgtttgg 101 cgtgttacga caggattttt gcggcacagc
ttccgtcttc ggcagggcag 151 gaagggcagg agtcgaaagc cgtactcaat
ctgacggaaa ccgtccgcag 201 cagcttggat aagggcgagg cggtcattgt
tgttgaaaaa ggcggggatg 251 cgcttcctgc cgacagtgcg ggcgaaaccg
ccgatatcta tacgcctttg 301 agcctgatgt acgacttgga caaaaacgat
ttgcgcgggc tgttgggcgt 351 acgcgaacac aatccgatgt accttatgcc
gttttggtat aacaattcgc 401 ccaactatgc cccgagttcg ccgacgcgcg
gtacgactgt acaggaaaaa 451 ttcggacagc agaaacgtgc ggaaaccaaa
ttgcaggttt cgttcaaaag 501 caaaattgcc gaaaatttgt ttaaaacccg
cgcggatctg tggttcggct 551 acacccaaag atccgattgg cagatttaca
accaaggcag gaaatccgcg 601 ccgttccgca atacggatta caaacctgaa
attttcctga cccagcctgt 651 gaaggcggat ttgccgttcg gcggcaggct
gcgtatgctc ggtgcgggtt 701 ttgtccacca gtccaacgga cagagccgtc
ccgaatcgcg ttcgtggaac 751 aggatttatg ccatggcagg catggaatgg
ggcaaattga cggtgattcc 801 gcgcgtgtgg gtgcgtgcgt tcgatcagag
cggcgataaa aacgacaatc 851 ccgatattgc cgactatatg gggtatggcg
acgtgaagct gcagtaccgc 901 ctgaacgaca ggcagaatgt gtattccgta
ttgcgctaca accccaaaac 951 gggctacggc gcgattgaag ccgcctacac
gtttccgatt aagggcaaac 1001 tcaaaggcgt ggtacgcgga ttccacggtt
acggcgagag cctgatcgac 1051 tacaaccaca agcagaacgg tatcggtatc
gggttgatgt tcaacgactg 1101 ggacggcatc tga
This corresponds to the amino acid sequence <SEQ ID 1786; ORF
582.ng>:
TABLE-US-02152 g582.pep .. 1 MRYILLTGLL PTASAFGETA LQCAALTDNV
TRLACYDRIF AAQLPSSAGQ 51 EGQESKAVLN LTETVRSSLD KGEAVIVVEK
GGDALPADSA GETADIYTPL 101 SLMYDLDKND LRGLLGVREH NPMYLMPFWY
NNSPNYAPSS PTRGTTVQEK 151 FGQQKRAETK LQVSFKSKIA ENLFKTRADL
WFGYTQRSDW QIYNQGRKSA 201 PFRNTDYKPE IFLTQPVKAD LPFGGRLRML
GAGFVHQSNG QSRPESRSWN 251 RIYAMAGMEW GKLTVIPRVW VRAFDQSGDK
NDNPDIADYM GYGDVKLQYR 301 LNDRQNVYSV LRYNPKTGYG AIEAAYTFPI
KGKLKGVVRG FHGYGESLID 351 YNHKQNGIGI GLMFNDWDGI *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1787>:
TABLE-US-02153 m582.seq .. 1 ATGCGCTATA TTCTTTTGAC AGGACTGTTG
CCGATGGCAT CCGCTTTTGG 51 AGAGACCGCG CTGCAATGCG CCGCTTTGAC
GGACAATGTT ACGCGTTTGG 101 CGTGTTACGA CAGGATTTTT GCGGCACAGC
TTCCGTCTTC GGCAGGGCAG 151 GAAGGGCAGG AGTCGAAAGC CGTACTCAAT
CTGACGGAAA CCGTCCGCAG 201 CAGCCTGGAT AAGGGCGAGG CGGTCATTGT
TGTTGAAAAA GGCGGGGATG 251 CGCTTCCTGC CGACAGTGCG GGCGAAACCG
CCGACATCTA TACGCCTTTG 301 AGCCTGATGT ACGACTTGGA CAAAAACGAT
TTGCGCGGGC TGTTGGGCGT 351 ACGCGAACAC AATCCGATGT ACCTTATGCC
GCTCTGGTAC AACAATTCGC 401 CCAACTATGC CCCGGGTTCG CCGACGCGCG
GTACGACTGT ACAGGAAAAA 451 TTCGGACAGC AGAAACGTGC GGAAACCAAA
TTGCAGGTTT CGTTCAAAAG 501 CAAAATTGCC GAAGATTTGT TTAAAACCCG
CGCGGATCTG TGGTTCGGCT 551 ACACCCAAAG ATCCGATTGG CAGATTTACA
ACCAAGGCAG GAAATCCGCG 601 CCGTTCCGCA ATACGGATTA CAAACCTGAA
ATTTTCCTGA CCCAGCCTGT 651 GAAGGCGGAT TTGCCGTTCG GCGGCAGGCT
GCGTATGCTC GGTGCGGGTT 701 TTGTCCACCA GTCCAACGGA CAGAGCCGTC
CCGAATCGCG TTCGTGGAAC 751 AGGATTTACG CCATGGCAGG CATGGAATGG
GGCAAATTGA CGGTGATTCC 801 GCGCGTGTGG GTGCGTGCGT TCGATCAGAG
CGGCGATAAA AACGACAATC 851 CCGATATTGC CGACTATATG GGGTATGGCG
ACGTGAAGCT GCAGTACCGC 901 CTGAACGACA GGCAGAATGT GTATTCCGTA
TTGCGCTACA ACCCCAAAAC 951 GGGCTACGGC GCGATTGAAG CCGCCTACAC
GTTTCCGATT AAGGGCAAAC 1001 TCAAAGGCGT GGTACGCGGA TTCCACGGTT
ACGGCGAGAG CCTGATCGAC 1051 TACAACCACA AGCAGAACGG TATCGGTATC
GGGTTGATGT TCAACGACTT 1101 GGACGGCATC TGA
This corresponds to the amino acid sequence <SEQ ID 1788; ORF
582>:
TABLE-US-02154 m582.pep 1 MRYILLTGLL PMASAFGETA LQCAALTDNV
TRLACYDRIF AAQLPSSAGQ 51 EGQESKAVLN LTETVRSSLD KGEAVIVVEK
GGDALPADSA GETADIYTPL 101 SLMYDLDKND LRGLLGVREH NPMYLMPLWY
NNSPNYAPGS PTRGTTVQEK 151 FGQQKRAETK LQVSFKSKIA EDLFKTRADL
WFGYTQRSDW QIYNQGRKSA 201 PFRNTDYKPE IFLTQPVKAD LPFGGRLRML
GAGFVHQSNG QSRPESRSWN 251 RIYAMAGMEW GKLTVIPRVW VRAFDQSGDK
NDNPDIADYM GYGDVKLQYR 301 LNDRQNVYSV LRYNPKTGYG AIEAAYTFPI
KGKLKGVVRG FHGYGESLID 351 YNHKQNGIGI GLMFNDLDGI * m582/g582 98.6%
identity in 370 aa overlap 10 20 30 40 50 60 m582.pep
MRYILLTGLLPMASAFGETALQCAALTDNVTRLACYDRIFAAQLPSSAGQEGQESKAVLN
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| g582
MRYILLTGLLPTASAFGETALQCAALTDNVTRLACYDRIFAAQLPSSAGQEGQESKAVLN 10 20
30 40 50 60 70 80 90 100 110 120 m582.pep
LTETVRSSLDKGEAVIVVEKGGDALPADSAGETADIYTPLSLMYDLDKNDLRGLLGVREH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g582
LTETVRSSLDKGEAVIVVEKGGDALPADSAGETADIYTPLSLMYDLDKNDLRGLLGVREH 70 80
90 100 110 120 130 140 150 160 170 180 m582.pep
NPMYLMPLWYNNSPNYAPGSPTRGTTVQEKFGQQKRAETKLQVSFKSKIAEDLFKTRADL
|||||||:||||||||||:||||||||||||||||||||||||||||||||:|||||||| g582
NPMYLMPFWYNNSPNYAPSSPTRGTTVQEKFGQQKRAETKLQVSFKSKIAENLFKTRADL 130
140 150 160 170 180 190 200 210 220 230 240 m582.pep
WFGYTQRSDWQIYNQGRKSAPFRNTDYKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g582
WEGYTQRSDWQIYNQGRKSAPFRNTDYKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNG 190
200 210 220 230 240 250 260 270 280 290 300 m582.pep
QSRPESRSWNRIYAMAGMEWGKLTVIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g582
QSRPESRSWNRIYAMAGMEWGKLTVIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYR 250
260 270 280 290 300 310 320 330 340 350 360 m582.pep
LNDRQNVYSVLRYNPKTGYGAIEAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g582
LNDRQNVYSVLRYNPKTGYGAIEAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGI 310
320 330 340 350 360 370 m582.pep GLMFNDLDGIX |||||| |||| g582
GLMFNDWDGIX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1789>:
TABLE-US-02155 a582.seq 1 ATGCGCTATA TTCTTTTGAC AGGACTGTTG
CCGATGGCAT CCGCTTTTGG 51 AGAGACCGCG CTGCAATGCG CCGCTTTGAC
GGACAATGTT ACGCGTTTGG 101 CGTGTTACGA CAGGATTTTT GCGGCACAGC
TTCCGTCTTC GGCAGGGCAG 151 GAAGGGCAGG AGTCGAAAGC CGTACTCAAT
CTGACGGAAA CCGTCCGCAG 201 CAGCCTGGAT AAGGGCGAGG CGGTCATTGT
TGTTGAAAAA GGCGGGGATG 251 CGCTTCCTGC CGACAGTGCG GGCGAAACCG
CCGACATCTA TACGCCTTTG 301 AGCCTGATGT ACGACTTGGA CAAAAACGAT
TTGCGCGGGC TGTTGGGCGT 351 ACGCGAACAC AATCCGATGT ACCTTATGCC
GCTCTGGTAC AACAATTCGC 401 CCAACTATGC CCCGGGTTCG CCGACGCGCG
GTACGACTGT ACAGGAAAAA 451 TTCGGACAGC AGAAACGTGC GGAAACCAAA
TTGCAGGTTT CGTTCAAAAG 501 CAAAATTGCC GAAGATTTGT TTAAAACCCG
CGCGGATCTG TGGTTCGGCT 551 ACACCCAAAG ATCCGATTGG CAGATTTACA
ACCAAGGCAG GAAATCCGCG 601 CCGTTCCGCA ATACGGATTA CAAACCTGAA
ATTTTCCTGA CCCAGCCTGT 651 GAAGGCGGAT TTGCCGTTCG GCGGCAGGCT
GCGTATGCTC GGTGCGGGTT 701 TTGTCCACCA GTCCAACGGA CAGAGCCGTC
CCGAATCGCG TTCGTGGAAC 751 AGGATTTACG CCATGGCAGG CATGGAATGG
GGCAAATTGA CGGTGATTCC 801 GCGCGTGTGG GTGCGTGCGT TCGATCAGAG
CGGCGATAAA AACGACAATC 851 CCGATATTGC CGACTATATG GGGTATGGCG
ACGTGAAGCT GCAGTACCGC 901 CTGAACGACA GGCAGAATGT GTATTCCGTA
TTGCGCTACA ATCCCAAAAC 951 GGGCTACGGC GCGATTGAAG CCGCCTACAC
GTTTCCGATT AAGGGCAAAC 1001 TCAAAGGCGT GGTACGCGGA TTCCACGGTT
ACGGCGAGAG CCTGATCGAC 1051 TACAACCACA AGCAGAACGG TATCGGTATC
GGGTTGATGT TCAACGACTT 1101 GGACGGCATC TGA
This corresponds to the amino acid sequence <SEQ ID 1790; ORF
582.a>:
TABLE-US-02156 a582.pep 1 MRYILLTGLL PMASAFGETA LQCAALTDNV
TRLACYDRIF AAQLPSSAGQ 51 EGQESKAVLN LTETVRSSLD KGEAVIVVEK
GGDALPADSA GETADIYTPL 101 SLMYDLDKND LRGLLGVREH NPMYLMPLWY
NNSPNYAPGS PTRGTTVQEK 151 FGQQKRAETK LQVSFKSKIA EDLFKTRADL
WFGYTQRSDW QIYNQGRKSA 201 PFRNTDYKPE IFLTQPVKAD LPFGGRLRML
GAGFVHQSNG QSRPESRSWN 251 RIYAMAGMEW GKLTVIPRVW VRAFDQSGDK
NDNPDIADYM GYGDVKLQYR 301 LNDRQNVYSV LRYNPKTGYG AIEAAYTFPI
KGKLKGVVRG FHGYGESLID 351 YNHKQNGIGI GLMFNDLDGI * m582/a582 100.0%
identity in 370 aa overlap 10 20 30 40 50 60 m582.pep
MRYILLTGLLPMASAFGETALQCAALTDNVTRLACYDRIFAAQLPSSAGQEGQESKAVLN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
MRYILLTGLLPMASAFGETALQCAALTDNVTRLACYDRIFAAQLPSSAGQEGQESKAVLN 10 20
30 40 50 60 70 80 90 100 110 120 m582.pep
LTETVRSSLDKGEAVIVVEKGGDALPADSAGETADIYTPLSLMYDLDKNDLRGLLGVREH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
LTETVRSSLDKGEAVIVVEKGGDALPADSAGETADIYTPLSLMYDLDKNDLRGLLGVREH 70 80
90 100 110 120 130 140 150 160 170 180 m582.pep
NPMYLMPLWYNNSPNYAPGSPTRGTTVQEKFGQQKRAETKLQVSFKSKIAEDLFKTRADL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
NPMYLMPLWYNNSPNYAPGSPTRGTTVQEKFGQQKRAETKLQVSFKSKIAEDLFKTRADL 130
140 150 160 170 180 190 200 210 220 230 240 m582.pep
WFGYTQRSDWQIYNQGRKSAPFRNTDYKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
WFGYTQRSDWQIYNQGRKSAPFRNTDYKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNG 190
200 210 220 230 240 250 260 270 280 290 300 m582.pep
QSRPESRSWNRIYAMAGMEWGKLIVIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
QSRPESRSWNRIYAMAGMEWGKLIVIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYR 250
260 270 280 290 300 310 320 330 340 350 360 m582.pep
LNDRQNVYSVLRYNPKTGYGAIEAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a582
LNDRQNVYSVLRYNPKTGYGAIEAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGI 310
320 330 340 350 360 370 m582.pep GLMFNDLDGIX ||||||||||| a582
GLMFNDLDGIX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1791>:
TABLE-US-02157 g583.seq.. 1 atgataattg accaaagcca aatatttacc
catcttgcct tctgtgcctt 51 ttgcgggatt ggagccgtaa ctgccggcaa
tcgactgcat aatcggatgt 101 ataatgccgc cgccgcgcgc ggtattggaa
ggggtaacgg gagccagcag 151 cagttcggaa agagcgagac tgtaaccgat
gcccagcgtt tttcttccaa 201 aaacggcgat aaacaaatat ccgatacgca
tccccagccc tgttttgagc 251 aaaccgcgcg aaatcataac tgcgatggca
atcagccaaa tcaacggatt 301 ggcgaacgca ctcaacgcat cgctcatcgc
cgcgcccggt ttgtcggcgg 351 ttacgccggt tactgcgacc aacccgacgg
caataatcga cagcgcgccc 401 aacggcataa ccttgccgat aatggcggca
atcacaccga caaacatagc 451 cagcagcgtc caagcctgag gcttgacccc
gtcgggtacg ggcagtgcca 501 aaaccagggc gcacaatact gcggcaatgg
cgaggggtat cggtttgaaa 551 cccaatttca tcatattgac ctccgtaaaa
aagaccgtcc cgaaaaatcg 601 gaaaaataa
This corresponds to the amino acid sequence <SEQ ID 1792; ORF
583.ng>:
TABLE-US-02158 g583.pep.. 1 MIIDQSQIFT HLAFCAFCGI GAVTAGNRLH
NRMYNAAAAR GIGRGNGSQQ 51 QFGKSETVTD AQRFSSKNGD KQISDTHPQP
CFEQTARNHN CDGNQPNQRI 101 GERTQRIAHR RARFVGGYAG YCDQPDGNNR
QRAQRHNLAD NGGNHTDKHS 151 QQRPSLRLDP VGYGQCQNQG AQYCGNGEGY
RFETQFHHID LRKKDRPEKS 201 EK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1793>:
TABLE-US-02159 m583.seq.. 1 ATGATAGTTG ACCAAAGCCA AATATTTACC
CATCTTGCCT TCTGTGCCTT 51 TTGCGGGATT GGAGCCGTAA CTGCCGGCAA
TCGACTGCAT AATCGGATGT 101 ATAATGCCGC CGCCGCGCGC GGTATTGGAA
GGGGTAACGG GAGCCAGCAG 151 CAGTTCGGAA AGAGCGAGAC TGTAACCGAT
GCCCAGCGTT TTTCTTCCAA 201 AAACGGCGAT AAACAAATAT CCGATACGCA
TCCCCAGCCC TGTTTTGAGC 251 AAACCGCGCG AAATCATAAC TGCGATGGCA
ATCAGCCAAA TCAACGGATT 301 GGCGAACGCA CTCAACGCAT CGCTCATCGC
CGCGCCCGGT TTGTCGGCGG 351 TTACGCCGGT TACTGCGACC AACCCGACGG
CAATAATCGA CAGCGCGCCC 401 AACGGCATGG CCTTGCCGAT AATGGCGGCA
ATCACACCGA CAAACATGGC 451 CAGCAGCGTC CAAGCCTGAG GCTTGACCCC
GTCGGGTACG GGCAGTGCCA 501 AAACCAGGGC GCACAATACT GCGGCAATGG
CGAGGGGTAT CGGTTTGAAA 551 CCCAATTTCA TCATATTGAC CTCCGTAAAA
AAGACCGTCC CGAAAAATCG 601 GAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 1794; ORF
583>:
TABLE-US-02160 m583.pep.. 1 MIVDQSQIFT HLAFCAFCGI GAVTAGNRLH
NRMYNAAAAR GIGRGNGSQQ 51 QFGKSETVTD AQRFSSKNGD KQISDTHPQP
CFEQTARNHN CDGNQPNQRI 101 GERTQRIAHR RARFVGGYAG YCDQPDGNNR
QRAQRHGLAD NGGNHTDKHG 151 QQRPSLRLDP VGYGQCQNQG AQYCGNGEGY
RFETQFHHID LRKKDRPEKS 201 EK* m583/g583 98.5% identity in 202 aa
overlap 10 20 30 40 50 60 m583.pep
MIVDQSQIFTHLAFCAFCGIGAVTAGNRLHNRMYNAAAARGIGRGNGSQQQFGKSETVTD
||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g583
MIIDQSQIFTHLAFCAFCGIGAVTAGNRLHNRMYNAAAARGIGRGNGSQQQFGKSETVTD 10 20
30 40 50 60 70 80 90 100 110 120 m583.pep
AQRFSSKNGDKQISDTHPQPCFEQTARNHNCDGNQPNQRIGERTQRIAHRRARFVGGYAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g583
AQRFSSKNGDKQISDTHPQPCFEQTARNHNCDGNQPNQRIGERTQRIAHRRARFVGGYAG 70 80
90 100 110 120 130 140 150 160 170 180 m583.pep
YCDQPDGNNRQRAQRHGLADNGGNHTDKHGQQRPSLRLDPVGYGQCQNQGAQYCGNGEGY
||||||||||||||||:||||||||||||:|||||||||||||||||||||||||||||| g583
YCDQPDGNNRQRAQRHNLADNGGNHTDKHSQQRPSLRLDPVGYGQCQNQGAQYCGNGEGY 130
140 150 160 170 180 190 200 m583.pep RFETQFHHIDLRKKDRPEKSEKX
||||||||||||||||||||||| g583 RFETQFHHIDLRKKDRPEKSEKX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1795>:
TABLE-US-02161 a583.seq 1 ATGATAGTTG ACCAAAGCCA AATATTTACC
CATCTTGCCT TCTGTGCCTT 51 TTGCGGGATT GGAGCCGTAA CTGCCGGCAA
TCGACTGCAT AATCGGATGT 101 ATAATGCCGC CGCCGCGCGC GGTATTGGAA
GGGGTAACGG GAGCCAGCAG 151 CAGTTCGGAA AGAGCGAGAC TGTAACCGAT
GCCCAGCGTT TTTCTTCCAA 201 AAACGGCGAT AAACAAATAT CCGATACGCA
TCCCCAGCCC TGTTTTGAGC 251 AAACCGCGCG AAATCATAAC TGCGATGGCA
ATCAGCCAAA TCAACGGATT 301 GGCGAACGCA CTCAACGCAT CGCTCATCGC
CGCACCCGGT TTGTCGGCGG 351 TTACGCCGGT TACTGCGACC AACCCGACGG
CAATAATCGA CAGCGCACCC 401 AACGGCATGG CCTTGCCGAT AATGGCGGCA
ATCACACCGA TAAACATGGC 451 CAGCAGCGTC CAAGCCTGAG GCTTGACCCC
GTCGGGTACG GGCAGTGCCA 501 AAACCAAGGC GCACAATACT GCGGCAATGG
CGAGGGGTAT CGGTTTGAAA 551 CCCAATTTCA TCATATTGAC CTCCGTAAAA
AAGACCGTCC CGAAAAATCG 601 GAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 1796; ORF
583.a>:
TABLE-US-02162 a583.pep 1 MIVDQSQIFT HLAFCAFCGI GAVTAGNRLH
NRMYNAAAAR GIGRGNGSQQ 51 QFGKSETVTD AQRFSSKNGD KQISDTHPQP
CFEQTARNHN CDGNQPNQRI 101 GERTQRIAHR RTRFVGGYAG YCDQPDGNNR
QRTQRHGLAD NGGNHTDKHG 151 QQRPSLRLDP VGYGQCQNQG AQYCGNGEGY
RFETQFHHID LRKKDRPEKS 201 EK* m583/a583 99.0% identity in 202 aa
overlap 10 20 30 40 50 60 m583.pep
MIVDQSQIFTHLAFCAFCGIGAVTAGNRLHNRMYNAAAARGIGRGNGSQQQFGKSETVTD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a583
MIVDQSQIFTHLAFCAFCGIGAVTAGNRLHNRMYNAAAARGIGRGNGSQQQFGKSETVTD 10 20
30 40 50 60 70 80 90 100 110 120 m583.pep
AQRFSSKNGDKQISDTHPQPCFEQTARNHNCDGNQPNQRIGERTQRIAHRRARFVGGYAG
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| a583
AQRFSSKNGDKQISDTHPQPCFEQTARNHNCDGNQPNQRIGERTQRIAHRRTRFVGGYAG 70 80
90 100 110 120 130 140 150 160 170 180 m583.pep
YCDQPDGNNRQRAQRHGLADNGGNHTDKHGQQRPSLRLDPVGYGQCQNQGAQYCGNGEGY
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a583
YCDQPDGNNRQRTQRHGLADNGGNHTDKHGQQRPSLRLDPVGYGQCQNQGAQYCGNGEGY 130
140 150 160 170 180 190 200 m583.pep RFETQFHHIDLRKKDRPEKSEKX
||||||||||||||||||||||| a583 RFETQFHHIDLRKKDRPEKSEKX 190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1797>:
TABLE-US-02163 g584.seq.. 1 atgctgcgtt ctattttggc ggcttccctg
ctggcggtat cttttccggc 51 ggcggctgag gcattgaatt acaatattgt
cgaattttcc gaatcggcgg 101 gtatcgaggt ggctcaggat acaatgtccg
cgcgtttcca ggtggcggcg 151 gaaggacggg acaaaaatgc cgtcaatgcc
gagtttgtta aaaaattcaa 201 caatttcacc agaaaatcga aaaatggtag
ctttaaaacc gaattggtat 251 cgcgcagtgc gatgccgcgc tatcaatata
ccaacggcag acgcattcaa 301 acaggctggg aggagcgtgc ggaatttaag
gcggagggca gggattttga 351 tgctttaaac cgttttattg ctgatgttca
gacggatgct tcgcttgaag 401 ataccgattt cagcgtgtcg cgcgaacgcc
gaaacgaggt catcgatcag 451 gtcagcaagg atgccgtttt gcgtttcaag
gcgcgtgccg aaaaactggc 501 gggcgttctg ggtgcgtccg gttataaaat
cgtcaaattg aattttgggc 551 aaatcggcag ccatattgcg ggcgatgggg
ctgttcgggc aaaaatgctg 601 cgcgcgatgc cgatggcggc aagcgtcaat
atgaagggta cggattcagc 651 cgcaccgggt gtggaggaaa tcagcatcag
catcaatggg acggttcagt 701 tctaa
This corresponds to the amino acid sequence <SEQ ID 1798; ORF
584.ng>:
TABLE-US-02164 g584.pep Length:.. 1 MLRSILAASL LAVSFPAAAE
ALNYNIVEFS ESAGIEVAQD TMSARFQVAA 51 EGRDKNAVNA EFVKKFNNFT
RKSKNGSFKT ELVSRSAMPR YQYTNGRRIQ 101 TGWEERAEFK AEGRDFDALN
RFIADVQTDA SLEDTDFSVS RERRNEVIDQ 151 VSKDAVLRFK ARAEKLAGVL
GASGYKIVKL NFGQIGSHIA GDGAVRAKML 201 RAMPMAASVN MKGTDSAAPG
VEEISISING TVQF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1799>:
TABLE-US-02165 m584.seq.. 1 ATGTTGCGTC TTGTTTTGGC GGCTTCGCTG
TCGGCGGTAT CTTTTCCGGC 51 AGCGGCTGAA GCATTGAATT ACAATATTGT
CGAATTTTCC GAATCGGCGG 101 GTGTCGAGGT GGCTCAGGAT ACAATGTCCG
CACGTTTCCA AGTGACGGCG 151 GAAGGACGGG ACAAAAATGC CGTCAATGCT
GAGTTTGTTA AAAAATTCAA 201 CAAGTTCATC AGAAAATCGA AAAATGGTAG
CTTTAAAACC GAATTGGTAT 251 CGCGCAGTGC GATGCCGCGC TATCAATATA
CCAACGGCAG ACGCATTCAA 301 ACAGGCTGGG AGGAGCGTGC GGAATTTAAG
GTCGAAGGTA GAGATTTTGA 351 TGAGTTAAAC CGTTTTATTG CCGATATTCA
AGCAGATGCC GCGTTGGmAT 401 ATACGGATTT CCATGTGTCG CGCGAACGCC
GCAACGAGGT CATCkATCAG 451 GTCAGCAAGG ATGCCGTTTT GCGTTTCAAG
GCGCGTGCCG AAAAGTTGGC 501 GGGCGTTTTG GGTGCGTCCG GTTATAAAAT
CGTCAAATTG AATTTGGGAC 551 ACATCGGCAG CCATATCGCG GGAGGGGGAG
CTGCTCAGGC AAAAATGCTT 601 CGTGCCATGC CGATGGCGGC AAGCGTCAAT
ATGGAGGGTG CGGATTCCGC 651 CGCGCCTGGT GTGGAGGAAA TCAGCATCAG
CGTCAATGGG ACGGTTCAGT 701 TCTGA
This corresponds to the amino acid sequence <SEQ ID 1800; ORF
584>:
TABLE-US-02166 m584.pep.. 1 MLRLVLAASL SAVSFPAAAE ALNYNIVEFS
ESAGVEVAQD TMSARFQVTA 51 EGRDKNAVNA EFVKKFNKFI RKSKNGSFKT
ELVSRSAMPR YQYTNGRRIQ 101 TGWEERAEFK VEGRDFDELN RFIADIQADA
ALXYTDFHVS RERRNEVIXQ 151 VSKDAVLRFK ARAEKLAGVL GASGYKIVKL
NLGHIGSHIA GGGAAQAKML 201 RAMPMAASVN MEGADSAAPG VEEISISVNG TVQF*
m584/g584 89.7% identity in 234 aa overlap 10 20 30 40 50 60
m584.pep
MLRLVLAASLSAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSARFQVTAEGRDKNAVNA |||
:||||| |||||||||||||||||||||||:|||||||||||||:||||||||||| g584
MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGIEVAQDTMSARFQVAAEGRDKNAVNA 10 20
30 40 50 60 70 80 90 100 110 120 m584.pep
EFVKKFNKFIRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTGWEERAEFKVEGRDFDELN
|||||||:| ||||||||||||||||||||||||||||||||||||||||:|||||| || g584
EFVKKENNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTGWEERAEFKAEGRDFDALN 70 80
90 100 110 120 130 140 150 160 170 180 m584.pep
RFIADIQADAALXYLDFHVSRERRNEVIXQVSKDAVLRFKARAEKLAGVLGASGYKIVKL
|||||:|:||:| ||| |||||||||| ||||||||||||||||||||||||||||||| g584
RFIADVQTDASLEDTDFSVSRERRNEVIDQVSKDAVLRFKARAEKLAGVLGASGYKIVKL 130
140 150 160 170 180 190 200 210 220 230 m584.pep
NLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAAPGVEEISISVNGTVQFX |:|:|||||||
||::|||||||||||||||:|:|||||||||||||:||||||| g584
NFGQIGSHIAGDGAVRAKMLRAMPMAASVNMKGTDSAAPGVEEISISINGTVQFX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1801>:
TABLE-US-02167 a584.seq 1 ATGTTGCGTT CTATTTTGGC GGCTTCCCTG
CTG....... .......... 51 .......... .......... .....ATTGT
CGAATTTTCT GAATCGGCGG 101 GTGTCGAGGC GGTTCAGGAT ACAATGTCCG
CACGTTTCCA AGTGACGGCG 151 GAAGGACGGG ACAAAAATGC CGTCAATGCC
GAGTTTGTTA AAAAATTCAA 201 CAATTTCACC AGAAAATCAA AAAATGGTAG
CTTTAAAACC GAATTGGTAT 251 CGCGCAGTGC GATGCCGCGC TATCAATATA
CCAACGGCAG ACGCATTCAA 301 ACAGGTTGGG AGGAGCGTGC GGAATTTAAG
GTCGAGGGTA GGAATTTTGA 351 TGCGTTGAAC CGTTTTATTG CCGATGTTCA
GGCAGATGCC GCGTTGGAAT 401 ATACGGATTT CCATGTGTCG CGCGAACGCC
GCAACGAGGT CATCGATCAG 451 GTCAGCAAGG ATGCCGTTTT GCGTTTCAAG
GCGCGTGCCG AAAAGTTGGC 501 GGGCGTTTTG GGTGCGTCCG GTTATAAAAT
CGTCAAATTG AATTTGGGAC 551 ACATCGGCAG CCATATCGCG GGAGGGGGAG
CTGCTCAGGC AAAAATGCTT 601 CGTGCCATGC CGATGGCGGC AAGCGTCAAT
ATGGAGGGTG CGGATTCCGC 651 CGCGCCTGGT GTGGAGGAAA TCAGCATCAG
CGTCAATGGG ACGGTTCAGT 701 TCTGA
This corresponds to the amino acid sequence <SEQ ID 1802; ORF
584.a>:
TABLE-US-02168 a584.pep 1 MLRSILAASL L......... .....IVEFS
ESAGVEAVQD TMSARFQVTA 51 EGRDKNAVNA EFVKKFNNFT RKSKNGSFKT
ELVSRSAMPR YQYTNGRRIQ 101 TGWEERAEFK VEGRNFDALN RFIADVQADA
ALEYTDFHVS RERRNEVIDQ 151 VSKDAVLRFK ARAEKLAGVL GASGYKIVKL
NLGHIGSHIA GGGAAQAKML 201 RAMPMAASVN MEGADSAAPG VEEISISVNG TVQF*
m584/a584 88.9% identity in 234 aa overlap 10 20 30 40 50 60
m584.pep
MLRLVLAASLSAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSARFQVTAEGRDKNAVNA |||
:|||||||||||||||||||||||||||||||::|||||||||||||||||||||| a584
MLRSILAASLL--------------IVEFSESAGVEAVQDTMSARFQVTAEGRDKNAVNA 10 20
30 40 70 80 90 100 110 120 m584.pep
EFVKKFNKFIRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTGWEERAEFKVEGRDFDELN
|||||||:| ||||||||||||||||||||||||||||||||||||||||||||:|| || a584
EFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTGWEERAEFKVEGRNFDALN 50 60
70 80 90 100 130 140 150 160 170 180 m584.pep
RFIADIQADAALXYTDFHVSRERRNEVIXQVSKDAVLRFKARAEKLAGVLGASGYKIVKL
|||||:|||||| ||||||||||||||| ||||||||||||||||||||||||||||||| a584
RFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFKARAEKLAGVLGASGYKIVKL 110
120 130 140 150 160 190 200 210 220 230 m584.pep
NLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAAPGVEEISISVNGTVQFX
||||||||||||||||||||||||||||||||||||||||||||||||||||||| a584
NLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAAPGVEEISISVNGTVQFX 170 180 190
200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1803>:
TABLE-US-02169 g585.seq.. 1 atgaaactgt tccaacgcat tttcgccaca
ttttgcgcgg ttatcgtctg 51 cgcaatcttt gtggcgagtt tttctttttg
gctggtgcag aacacccttg 101 ccgaaaacca attcaaccaa cgccgcacca
tcgaaaccac attgatgggc 151 agcattattt ccgcattcaa gacacggggc
gacaacggcg cgcgcgaaat 201 cctgaccgaa tggaaaaaca gccccgtctc
atccgccgtt tacgtcatac 251 agggcgacga gaaaaaagac atcttaaacc
gctatatcga caattacacc 301 atagaacgcg cccggctgtt tgccgccaac
aacccccatt ccaaccttgt 351 ccgcatcgaa tacgaccgtt tcggcgaaga
atacctgttc ttcattaaag 401 gctgggacaa ccaccaggca caacgcctgc
ccagcccgct gtttatcccg 451 ggcctgccgc ttgccccgat ttggcacgaa
ttcatcatcc tctccttcat 501 catcattgtc ggactgctga tggcatatat
ccttgccggc aacattgcca 551 aacccatcag aatcttaggc aacggcatgg
acagggtggc agaacgagaa 601 cttgaagacc gcgtttgcca acaggttcgc
gaccgcgacg acgaattggc 651 cgatgttgcc atgcaattcg acacaatggt
ggaaaaactg gaataa
This corresponds to the amino acid sequence <SEQ ID 1804; ORF
585.ng>:
TABLE-US-02170 g585.pep.. 1 MKLFQRIFAT FCAVIVCAIF VASFSFWLVQ
NTLAENQFNQ RRTIETTLMG 51 SIISAFKTRG DNGAREILTE WKNSPVSSAV
YVIQGDEKKD ILNRYIDNYT 101 IERARLFAAN NPHSNLVRIE YDRFGEEYLF
FIKGWDNHQA QRLPSPLFIP 151 GLPLAPIWHE FIILSFIIIV GLLMAYILAG
NIAKPIRILG NGMDRVAERE 201 LEDRVCQQVR DRDDELADVA MQFDTMVEKL E*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1805>:
TABLE-US-02171 m585.seq.. 1 ATGAAACTGT TCCAACGCAT TTTCGCCACA
TTTTGCGCGG TTATCGTCTG 51 TGCAATCTTT GTGGCGAGTT TTTCTTTCTG
GCTGGTGCAG AACACCCTTG 101 CCGAAAACCA GTTCAACCAA CGCCGCACCA
TCGAAACCAC TTTGATGGGC 151 AGCATCATTT CCGCATTCCG GGCACGCGGG
GACGCGGGTG CGCGCGAAAT 201 CCTGACGGAA TGGAAAGACA GCCCCGTCTC
ATCGGGCGTG TACGTTATAC 251 AGGGCGACGA GAAAAAAGAT ATCCTGAACC
GGTATATCGA CAGCTATACC 301 ATCGAACGCG CCCGGCTTTT CGCCGCCGGA
CACCCGCATT CCAACCTCGT 351 CCATATCGAA TACGACCGCT TCGGCGAAGA
ATACCTGTTC TTCACCAAAG 401 ACTGGGACAA ACTCCAAGCC CGCCGCCTGC
CCAGCCCCCT GTTGATCCCC 451 GGCCTGCCGC TCGCCCCGAT TTGGCACGAA
CTCATCATAT TGTCCTTCAT 501 CATCATCGTC GGACTGCTGA TGGCATATAT
CCTCGCCGGC AACATTGCCA 551 AACCCATCAG AATCTTAGGC AACGGCATGG
ACAGGGTGGC AAACGGAGAA 601 CTTGAAACCC GTATCTCCCA ACAGGTCGAC
GACCGCGACG ACGAATTGTC 651 CCATCTTGCC ATCCAATTCG ACAAAATGGT
GGAAAAACTC GAAAAACTCG 701 TTGCCAAAGA ACGCCACCTG CTCCATCACG
TCTCCCATGA AATGCGTTCT 751 CCCCTTGCGC GCATGCAGGC AATTGTCGGA
CTGATTCAGG CGCAGCCCCA 801 AAAACAGGAG CAATATCTCA AACGGCTGGA
AGGCGAACTG ACCCGCATGG 851 ATACGCTGGC CGGGGAACTG TTAACCCTGT
CCCGTCTCGA AACTTCCAAT 901 ATGGCTTTGG AAAAAGAAAG CCTGAAACTC
CTGCCCTTCC TGGGCAACCT 951 GGTAGAAGAC AATCAAAGCA TTGCCCAGAA
AAACGGACAA ACGGTTACCC 1001 TGTCTGCCGA CGGAAAAATC CCCGAAAACA
CAACCATCCT TGCCAACGAA 1051 AGCTACCTGT ACCGCGCCTT CGACAACGTC
ATCCGCAACG CCGTCAACTA 1101 CAGTCCCGAA GGCAGCACCA TCCTGATCAA
CATCGGACAA GACCACAAAC 1151 ACTGGATAAT CGACGTTACC GACAACGGCC
CCGGCGTGGA CGAAATGCAG 1201 CTCCCGCACA TCTTCACCGC TTTCTACCGT
GCAGACTCCA GTGCCAACAA 1251 ACCCGGAACA GGACTGGGGC TTGCATTGAC
CCAACATATT ATTGAACAGC 1301 ACTGCGGCAA AATCATCGCC GAAAACATCA
AACCGAACGG TCTGCGGATG 1351 CGCTTTATCC TGCCCAAGAA AAAAACCGGT
TCCAAAACAG AAAAAAGTGC 1401 GAACTGA
This corresponds to the amino acid sequence <SEQ ID 1806; ORF
585>:
TABLE-US-02172 m585.pep.. 1 MKLFQRIFAT FCAVIVCAIF VASFSFWLVQ
NTLAENQFNQ RRTIETTLMG 51 SIISAFRARG DAGAREILTE WKDSPVSSGV
YVIQGDEKKD ILNRYIDSYT 101 IERARLFAAG HPHSNLVHIE YDRFGEEYLF
FTKDWDKLQA RRLPSPLLIP 151 GLPLAPIWHE LIILSFIIIV GLLMAYILAG
NIAKPIRILG NGMDRVANGE 201 LETRISQQVD DRDDELSHLA IQFDKMVEKL
EKLVAKERHL LHHVSHEMRS 251 PLARMQAIVG LIQAQPQKQE QYLKRLEGEL
TRMDTLAGEL LTLSRLETSN 301 MALEKESLKL LPFLGNLVED NQSIAQKNGQ
TVTLSADGKI PENTTILANE 351 SYLYRAFDNV IRNAVNYSPE GSTILINIGQ
DHKHWIIDVT DNGPGVDEMQ 401 LPHIFTAFYR ADSSANKPGT GLGLALTQHI
IEQHCGKIIA ENIKPNGLRM 451 RFILPKKKTG SKTEKSAN* m585/g585 88.3%
identity in 231 aa overlap 10 20 30 40 50 60 m585.pep
MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMGSIISAFRARG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||::|| g585
MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMGSIISAFKTRG 10 20
30 40 50 60 70 80 90 100 110 120 m585.pep
DAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIERARLFAAGHPHSNLVHIE |
||||||||||:|||||:||||||||||||||||||:|||||||||||::||||||:|| g585
DNGAREILTEWKNSPVSSAVYVIQGDEKKDILNRYIDNYTIERARLFAANNPHSNLVRIE 70 80
90 100 110 120 130 140 150 160 170 180 m585.pep
YDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHELIILSFIIIVGLLMAYILAG
||||||||||| | ||: ||:||||||:||||||||||||:||||||||||||||||||| g585
YDRFGEEYLFFIKGWDNHQAQRLPSPLFIPGLPLAPIWHEFIILSFIIIVGLLMAYILAG 130
140 150 160 170 180 190 200 210 220 230 240 m585.pep
NIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSHLAIQFDKMVEKLEKLVAKERHL
|||||||||||||||||: ||| |: ||| ||||||: :|:||| |||||| g585
NIAKPIRILGNGMDRVAERELEDRVCQQVRDRDDELADVAMQFDTMVEKLEX 190 200 210
220 230 250 260 270 280 290 300 m585.pep
LHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRLEGELTRMDTLAGELLTLSRLETSN
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1807>:
TABLE-US-02173 a585.seq 1 ATGAAACTGT TCCAACGCAT CTTCGCCACA
TTTTGCGCGG TTATCGTCTG 51 TGCAATCTTT GTGGCGAGTT TTTCTTTCTG
GCTGGTGCAG AACACCCTTG 101 CCGAAAACCA GTTCAACCAA CGCCGCACCA
TCGAAACCAC TTTGATGGGC 151 AGCATCATTT CCGCATTCCG GGCACGCGGG
GACGCGGGTG CGCGCGAAAT 201 CCTGACGGAA TGGAAAGACA GCCCCGTCTC
ATCGGGCGTG TACGTTATAC 251 AGGGCGACGA GAAAAAAGAT ATCCTGCACC
GGTATATCGA CAGCTACACC 301 ATCGAACGCG CCCGGCTTTT CGCCGCCGGA
CACCCGCATT CCAACCTCGT 351 CCATATCGAA TACGACCGCT TCGGCGAAGA
ATACCTGTTC TTCACCAAAG 401 ACTGGGACAA ACTCCAAGCC CGCCGCCTGC
CCAGCCCCCT GTTGATCCCC 451 GGCCTGCCGC TCGCCCCGAT TTGGCACGAA
CTCATCATAT TGTCCTTCAT 501 CATCATCGTC GGACTGCTGA TGGCGTACAT
CCTCGCCGGC AACATTGCCA 551 AACCCATCAG AATCTTAGGC AACGGCATGG
ACAGGGTGGC AAACGGAGAA 601 CTTGAAACCC GTATCTCCCA ACAGGTCGAC
GACCGCGACG ACGAATTGTC 651 CCATCTTGCC ATCCAATTCG ACAAAATGGT
GGAAAAACTC GAAAAACTCG 701 TTGCCAAAGA ACGCCACCTG CTCCATCACG
TCTCCCATGA AATGCGTTCT 751 CCCCTTGCGC GCATGCAGGC AATTGTCGGA
CTGATTCAGG CGCAGCCCCA 801 AAAACAGGAG CAATATCTCA AACGGCTGGA
AGGCGAACTG AACGGCATGG 851 ATACGCTGGC CGGGGAACTG TTAACCCTGT
CCCGTCTCGA AACTTCCAAT 901 ATGGCTTTGG AAAAAGAAAG CCTGAAACTC
CTGCCCTTCC TGGGCAACCT 951 GGTAGAAGAC AATCAAAGCA TTGCCCAGAA
AAACGGACAA ACGGTTACCC 1001 TGTCTGCCGA CGGAAAAATC CCCGAAAACA
CAACCATCCT TGCCAACGAA 1051 AGCTACCTGT ACCGCGCCTT CGACAACGTC
ATCCGCAACG CCGTCAACTA 1101 CAGTCCCGAA GGCAGCACCA TCCTGATCAA
CATCGGACAA GACCACAAAC 1151 ACTGGATAAT CGACGTTACC GACAACGGCC
CCGGCGTGGA CGAAATGCAG 1201 CTCCCGCACA TCTTCACCGC TTTCTACCGT
GCAGACTCCA GTGCCAACAA 1251 ACCCGGAACA GGACTGGGGC TTGCATTGAC
CCAACATATT ATTGAACAGC 1301 ACTGCGGCAA AATCATCGCC GAAAACATCA
AACCGAACGG TCTGCGGATG 1351 CGCTTTATCC TGCCCAAGAA AAAAACCGGT
TCCAAAACAG AAAAAAGTGC 1401 GAACTGA
This corresponds to the amino acid sequence <SEQ ID 1808; ORF
585.a>:
TABLE-US-02174 a585.pep 1 MKLFQRIFAT FCAVIVCAIF VASFSFWLVQ
NTLAENQFNQ RRTIETTLMG 51 SIISAFRARG DAGAREILTE WKDSPVSSGV
YVIQGDEKKD ILHRYIDSYT 101 IERARLFAAG HPHSNLVHIE YDRFGEEYLF
FTKDWDKLQA RRLPSPLLIP 151 GLPLAPIWHE LIILSFIIIV GLLMAYILAG
NIAKPIRILG NGMDRVANGE 201 LETRISQQVD DRDDELSHLA IQFDKMVEKL
EKLVAKERHL LHHVSHEMRS 251 PLARMQAIVG LIQAQPQKQE QYLKRLEGEL
TRMDTLAGEL LTLSRLETSN 301 MALEKESLKL LPFLGNLVED NQSIAQKNGQ
TVTLSADGKI PENTTILANE 351 SYLYRAFDNV IRNAVNYSPE GSTILINIGQ
DHKHWIIDVT DNGPGVDEMQ 401 LPHIFTAFYR ADSSANKPGT GLGLALTQHI
IEQHCGKIIA ENIKPNGLRM 451 RFILPKKKTG SKTEKSAN* m585/a585 99.8%
identity in 468 aa overlap 10 20 30 40 50 60 m585.pep
MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMGSIISAFRARG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMGSIISAFRARG 10 20
30 40 50 60 70 80 90 100 110 120 m585.pep
DAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIERARLFAAGHPHSNLVHIE
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| a585
DAGAREILTEWKDSPVSSGVYVIQGDEKKDILHRYIDSYTIERARLFAAGHPHSNLVHIE 70 80
90 100 110 120 130 140 150 160 170 180 m585.pep
YDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHELIILSFIIIVGLLMAYILAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
YDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHELIILSFIIIVGLLMAYILAG 130
140 150 160 170 180 190 200 210 220 230 240 m585.pep
NIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSHLAIQFDKMVEKLEKLVAKERHL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
NIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSHLAIQFDKMVEKLEKLVAKERHL 190
200 210 220 230 240 250 260 270 280 290 300 m585.pep
LHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRLEGELTRMDTLAGELLTLSRLETSN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
LHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRLEGELTRMDTLAGELLTLSRLETSN 250
260 270 280 290 300 310 320 330 340 350 360 m585.pep
MALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTLSADGKIPENTTILANESYLYRAFDNV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
MALEKESLKLLPFLGNLVEDNQSIAQKNGQTVILSADGKIPENTTILANESYLYRAFDNV 310
320 330 340 350 360 370 380 390 400 410 420 m585.pep
IRNAVNYSPEGSTILINIGQDHKHWIIDVTDNGPGVDEMQLPHIFTAFYRADSSANKPGT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a585
IRNAVNYSPEGSTILINIGQDHKHWIIDVIDNGPGVDEMQLPHIFTAFYRADSSANKPGT 370
380 390 400 410 420 430 440 450 460 469 m585.pep
GLGLALTQHIIEQHCGKIIAENIKPNGLRMRFILPKKKTGSKTEKSANX
||||||||||||||||||||||||||||||||||||||||||||||||| a585
GLGLALTQHIIEQHCGKIIAENIKPNGLRMRFILPKKKTGSKTEKSANX 430 440 450
460
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1809>:
TABLE-US-02175 g586.seq.. 1 atggcagccc atctcgaaga acaacaagag
ttagacaact ttaaatattt 51 ttggaaaacc acgggcaaat ggctgtttgc
cctgctgatt ttggcggcac 101 tcggctactt gggatacacg gtttaccaaa
accgtgcggc ttcccaaaat 151 caggaagcgg cggcggtgct ggcaaacatc
gtggaaaagg cgcaaaacaa 201 agccccgcaa agcgaaatca atgccgaact
gtccaaactc caacaaagct 251 acccccattc catttccgcc gcccaagcca
cgctgatggc ggcggcaacc 301 gaatttgacg cgcagcgtta cgatgttgcc
gaaggtcatt tgaaatgggt 351 gttgtccaac caaaaagaca gcctgattca
ggcgttggcg gcgcagcgtc 401 tgggcgttgt gttgttgcaa caaaaaaaat
acgatgccgc gcttgccgca 451 ctcgacacgc cggttgaggc ggacttcgcc
cccctgctga tggaaactaa 501 aggcgatgtt tatgccgcac aggaaaaaag
ccaggaagcc ttaaaaaact 551 acggacaggc tttggaaaaa atgcctcaag
attctgtcgg tcgcgaattg 601 cttcaaatga aactcgattc gctgaaataa
This corresponds to the amino acid sequence <SEQ ID 1810; ORF
586.ng>:
TABLE-US-02176 g586.pep.. 1 MAAHLEEQQE LDNFKYFWKT TGKWLFALLI
LAALGYLGYT VYQNRAASQN 51 QEAAAVLANI VEKAQNKAPQ SEINAELSKL
QQSYPHSISA AQATLMAAAT 101 EFDAQRYDVA EGHLKWVLSN QKDSLIQALA
AQRLGVVLLQ QKKYDAALAA 151 LDTPVEADFA PLLMETKGDV YAAQEKSQEA
LKNYGQALEK MPQDSVGREL 201 LQMKLDSLK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1811>:
TABLE-US-02177 m586.seq 1 ATGGCAGCCC ATCTCGAAGA ACAACAAGAG
TTAGACAACT TTAAATATTT 51 TTGGAAAACC ACGGGCAAAT GGCTGTTTGC
CTTGCTGATT TTGGCGGCAC 101 TCGGCTACTT GGGATACACG GTTTACCAAA
ACCGTAAAGT TTCCCAAAAT 151 CAGGAAGCGG CGGCGGTGCT GGCAAACATC
GTAGAAAAGG CGCAAAGCAA 201 AGCCCCGCAA AGCGAAATCA ATGCCGAATT
GACCAAACTC CAACAAAGCT 251 ACCCGCATTC CATTTCCGCC GCCCAAGCCA
CACTGATGGC GGCGGCAACC 301 GAATTTGACG CGCAGCGTTA CGATGTTGCC
GAAGGCCATT TGAAATGGGT 351 GTTGTCCAAC CAAAAAGACA GCCTGATTCA
AGCGTTGGCG GCGCAGCGTC 401 TGGGCGTTGT GTTGTTGCAA CAAAAAAAAT
ACGATGCCGC GCTTGCCGCG 451 CTCGATACGC CGGTTGAAGC GGACTTCGCC
CCCCTGCTGA TGGAAACCAA 501 AGGCGATGTC TATGCCGCAC AGGGAAAAAG
CCAGGAAGCC TTAAAAAACT 551 ACGGACAGGC TTTAGAAAAA ATGCCTCAAG
ATTCTGTCGG TCGCGAATTG 601 GTTCAAATGA AACTTGATTC GCTGAAATAA
This corresponds to the amino acid sequence <SEQ ID 1812; ORF
586>:
TABLE-US-02178 m586.pep 1 MAAHLEEQQE LDNFKYFWKT TGKWLFALLI
LAALGYLGYT VYQNRKVSQN 51 QEAAAVLANI VEKAQSKAPQ SEINAELTKL
QQSYPHSISA AQATLMAAAT 101 EFDAQRYDVA EGHLKWVLSN QKDSLIQALA
AQRLGVVLLQ QKKYDAALAA 151 LDTPVEADFA PLLMETKGDV YAAQGKSQEA
LKNYGQALEK MPQDSVGREL 201 VQMKLDSLK* m586/g586 97.1% identity in
209 aa overlap 10 20 30 40 50 60 m586.pep
MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYLVYQNRKVSQNQEAAAVLANI
||||||||||||||||||||||||||||||||||||||||||||| :||||||||||||| g586
MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYLVYQNRAASQNQEAAAVLANI 10 20
30 40 50 60 70 80 90 100 110 120 m586.pep
VEKAQSKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEFDAQRYDVAEGHLKWVLSN
|||||:|||||||||||:|||||||||||||||||||||||||||||||||||||||||| g586
VEKAQNKAPQSEINAELSKLQQSYPHSISAAQATLMAAATEFDAQRYDVAEGHLKWVLSN 70 80
90 100 110 120 130 140 150 160 170 180 m586.pep
QKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFAPLLMETKGDVYAAQGKSQEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| g586
QKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFAPLLMETKGDVYAAQEKSQEA 130
140 150 160 170 180 190 200 210 m586.pep
LKNYGQALEKMPQDSVGRELVQMKLDSLKX ||||||||||||||||||||:||||||||| g586
LKNYGQALEKMPQDSVGRELLQMKLDSLKX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1813>:
TABLE-US-02179 a586.seq 1 ATGGCAGCCC ATTTGGAAGA ACAACAAGAG
TTGGACAACT TTAAATATTT 51 TTGGAAAACC ACGGGCAAAT GGCTGTTTGC
CGTGCTGATT TTGGCGGCAC 101 TCGGCTACTT GGGATACACG GTTTACCAAA
ACCGTGCGGC TTCCCAAAAT 151 CAGGAAGCGG CGGCGGTGCT GGCAAACATC
GTGGAAAAGG CGCAAAACAA 201 AGCCCCGCAA AGCGAAATCA ATGCCGAATT
GGCCAAGCTC CAACAAAGCT 251 ACCCCCATTC CATTTCCGCC GCCCAAGCCA
CGCTGATGGC GGCAGCAACC 301 GAATTTGACG CGCAGCGTTA CGATGTTGCC
GAAGGCCATT TGAAATGGGT 351 ATTGTCCAAC CAAAAAGACA GCCTGATCCA
GGCGTTGGCG GCGCAGCGTC 401 TGGGCGTTGT GTTGTTGCAA CAAAAAAAAT
ACGATGCCGC GCTTGCCGCA 451 CTCGACACGC CGGTTGAAGC GGACTTCGCC
CCCCTGCTGA TGGAAACCAA 501 AGGCGATGTC TATGCCGCAC AGGGAAAAAG
CCAGGAAGCC TTAAAAAACT 551 ACGGACAGGC TTTAGAAAAA ATGCCTCAAG
ATTCTGTCGG TCGCGAATTG 601 GTTCAAATGA AACTTGATTC GCTGAAATAA
This corresponds to the amino acid sequence <SEQ ID 1814; ORF
586.a>:
TABLE-US-02180 a586.pep 1 MAAHLEEQQE LDNFKYFWKT TGKWLFAVLI
LAALGYLGYT VYQNRAASQN 51 QEAAAVLANI VEKAQNKAPQ SEINAELAKL
QQSYPHSISA AQATLMAAAT 101 EFDAQRYDVA EGHLKWVLSN QKDSLIQALA
AQRLGVVLLQ QKKYDAALAA 151 LDTPVEADFA PLLMETKGDV YAAQGKSQEA
LKNYGQALEK MPQDSVGREL 201 VQMKLDSLK* m586/a586 97.6% identity in
209 aa overlap 10 20 30 40 50 60 m586.pep
MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQNRKVSQNQEAAAVLANI
|||||||||||||||||||||||||||:||||||||||||||||| :||||||||||||| a586
MAAHLEEQQELDNFKYFWKTTGKWLFAVLILAALGYLGYTVYQNRAASQNQEAAAVLANI 10 20
30 40 50 60 70 80 90 100 110 120 m586.pep
VEKAQSKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEFDAQRYDVAEGHLKWVLSN
|||||:|||||||||||:|||||||||||||||||||||||||||||||||||||||||| a586
VEKAQNKAPQSEINAELAKLQQSYPHSISAAQATLMAAATEFDAQRYDVAEGHLKWVLSN 70 80
90 100 110 120 130 140 150 160 170 180 m586.pep
QKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFAPLLMETKGDVYAAQGKSQEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a586
QKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFAPLLMETKGDVYAAQGKSQEA 130
140 150 160 170 180 190 200 210 m586.pep
LKNYGQALEKMPQDSVGRELVQMKLDSLKX |||||||||||||||||||||||||||||| a586
LKNYGQALEKMPQDSVGRELVQMKLDSLKX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1815>:
TABLE-US-02181 g587.seq.. 1 atgaaacgta tctttttgcc cgccttgccc
gccatcctgc ctttatccgc 51 ttatgccgac ctgcccttga cgattgaaga
cataatgacc gacaagggaa 101 aatggaaact ggaaacttcc cttacctatc
tgaatagcga aaacagccgc 151 gccgcacttg ccgcaccggt ttacattcaa
accggcgcaa cctcgtttat 201 ccccattccg accgaaattc aagaaaacgg
cagcaatacc gatatgctcg 251 ccggcacgct cggtttgcgc tacggactga
ccggcaatac cgacatttac 301 ggcagcggca gctatctgtg gcacgaagaa
cgcaaactcg acggcaacgg 351 caaaacccgc aacaaacgga tgtccgacat
atccgccggc atcagccaca 401 ccttccttaa agacggcaaa aaccccgccc
taatcagctt tcttgaaagc 451 acggtttacg aaaaatcgcg caacaaagcc
tcgttaatca aaaaaagggg 501 gctttgcccc ttttataact taaggataaa
ttatgaatat taa
This corresponds to the amino acid sequence <SEQ ID 1816; ORF
587.ng>:
TABLE-US-02182 g587.pep.. 1 MKRIFLPALP AILPLSAYAD LPLTIEDIMT
DKGKWKLETS LTYLNSENSR 51 AALAAPVYIQ TGATSFIPIP TEIQENGSNT
DMLAGTLGLR YGLTGNTDIY 101 GSGSYLWHEE RKLDGNGKTR NKRMSDISAG
ISHTFLKDGK NPALISFLES 151 TVYEKSRNKA SLIKKRGLCP FYNLRINYEY *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1817>:
TABLE-US-02183 m587.seq.. 1 ATGAAGCGCA TCTTTTTGCC CGCCTTGCCC
GCCATCCTGC CTTTATCCAC 51 TTATGCCGAC CTGCCCTTGA CGATTGAAGA
CATAATGACC GACAAGGGAA 101 AATGGAAACT GGAAACTTCC CTTACCTACC
TGAACAGCGA AAACAACCGC 151 GCCGAACTTG CCGCACCGGT TTACATTCAA
ACCGGCGCAA CCTCGTTTAT 201 CCCCATTCCG ACCGAAATCC AAGAAAACGG
CAGCAATACC GATATGCTCG 251 TCGGCACGCT CGGTTTGCGC TACGGACTGA
CCGGGAATAC CGACATTTAC 301 GGCAGCGGCA GCTATCTGTG GCACGAAGAA
CGCAAACTCG ACGGCAACAG 351 CAAAACCCGC AACAAACGGA TGTCCGACGT
ATCCCTCGGC ATCAGCCACA 401 CTTTCCTTAA AGACGACAAA AACCCCGCCC
TAATCAGCTT TCTTGAAAGC 451 ACGGTTTACG AAAAATCGCG CAACAAAGCC
TCGTCGGGAA AATCCTGGCT 501 CATCGGCGCC ACCACCTACA AAGCCATAGA
TCCGATTGTC CTTTCCTTCA 551 CCGCCGCCTA CCGCATCAAC GGCAGCAAAA
CCCTTTCAGA CGGCATCCGC 601 TACAAATCGG GCAACTACCT GCTGCTCAAC
CCCAACATCT CATTTGCTGC 651 CAACGACAGA ATCAGCCTGA CCGGAGGCAT
CCAATGGCTG GGCAGGCAGC 701 CCGACCGGAC GGACGGCAAA CGGGAATCCT
CCAGAAACAC ATCCACCTAC 751 GCCCATTTCG GCGCAGGTTT CGGTTTCACC
AAAACCACGG CTTTAAACGC 801 ATCCGCACGT TTCAACGTTT CAGGGCAAAG
CAGTTCCGAA CTGAAATTTG 851 GCGTACAGCA TACATTTTAA
This corresponds to the amino acid sequence <SEQ ID 1818; ORF
587>:
TABLE-US-02184 m587.pep.. 1 MKRIFLPALP AILPLSTYAD LPLTIEDIMT
DKGKWKLETS LTYLNSENNR 51 AELAAPVYIQ TGATSFIPIP TEIQENGSNT
DMLVGTLGLR YGLTGNTDIY 101 GSGSYLWHEE RKLDGNSKTR NKRMSDVSLG
ISHTFLKDDK NPALISFLES 151 TVYEKSRNKA SSGKSWLIGA TTYKAIDPIV
LSLTAAYRIN GSKTLSDGIR 201 YKSGNYLLLN PNISFAANDR ISLTGGIQWL
GRQPDRTDGK RESSRNTSTY 251 AHFGAGFGFT KTTALNASAR FNVSGQSSSE
LKFGVQHTF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02185 m587/g587 95.0% identity in 161 aa overlap 10 20 30
40 50 60 m587.pep
MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ
||||||||||||||||:|||||||||||||||||||||||||||||||:|| |||||||| g587
MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYLNSENSRAALAAPVYIQ 10 20
30 40 50 60 70 80 90 100 110 120 m587.pep
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNSKTR
|||||||||||||||||||||||:||||||||||||||||||||||||||||||||:||| g587
TGATSFIPIPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNGKTR 70 80
90 100 110 120 130 140 150 160 170 180 m587.pep
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPIV
||||||:| ||||||||| |||||||||||||||||||||| g587
NKRMSDISAGISHTFLKDGKNPALISFLESTVYEKSRNKASLIKKRGLCPFYNLRINYEY 130
140 150 160 170 180 190 200 210 220 230 240 m587.pep
LSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAANDRISLTGGIQWLGRQPDRTDGK g587
X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1819>:
TABLE-US-02186 a587.seq 1 ATGAAGCGCA TCTTTTTGCC CGCCTTGCCC
GCCATCCTGC CTTTATCCGC 51 TTATGCCGAC CTGCCCTTGA CGATTGAAGA
CATAATGACC GACAAGGGCA 101 AATGGAAACT GGAAACTTCC CTTACCTACC
TGAACAGCGA AAACAACCGC 151 GCCGAACTTG CCGCACCGGT TTACATCCAA
ACCGGCGCAA CCTCGTTTAT 201 CCCCATTCCG ACCGAAATCC AAGAAAACGG
CAGCAATACC GATATGCTCG 251 TTGGCACGCT CGGTTTGCGC TACGGACTGA
CCGGGAATAC CGACATTTAC 301 GGCAGCGGCA GCTATCTGTG GCACGAAGAA
CGCAAACTCG ACGGCAACGG 351 CAAAACCCGA AACAAACGGA TGTCCGACGT
ATCCCTCGGC ATCAGCCACA 401 CCTTCCTTAA AGACGACAAA AACCCCGCCC
TAATCAGCTT TCTTGAAAGC 451 ACGGTTTACG AAAAATCGCG CAACAAAGCC
TCGTCGGGAA AATCCTGGCT 501 CATCGGCGCC ACCACCTACA AAGCCATCGA
CCCCGTCGTC CTCTCATTGA 551 CCGCTGCCTA CCGTATCAAC GGCAGCAAAA
CCCTTTCAAG CAACACCAAA 601 TACAAAGCAG GCAATTACTG GATGCTGAAT
CCCAATATAT CCTTCGCCGC 651 CAACGACAGA ATCAGCCTCA CGGGCGGCAT
CCAATGGCTG GGCAAGCAGC 701 CCGACCGTCT GGACGGCAAA AAAGAATCCG
CAAGAAACAC ATCCACCTAT 751 GCCCATTTCG GCGCAGGTTT CGGTTTCACC
AAAACCACGG CTTTAAACGC 801 ATCCGCACGT TTCAACGTTT CAGGGCAAAG
CAGTTCCGAA CTGAAATTTG 851 GCGTACAGCA TACGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1820; ORF
587.a>:
TABLE-US-02187 a587.pep 1 MKRIFLPALP AILPLSAYAD LPLTIEDIMT
DKGKWKLETS LTYLNSENNR 51 AELAAPVYIQ TGATSFIPIP TEIQENGSNT
DMLVGTLGLR YGLTGNTDIY 101 GSGSYLWHEE RKLDGNGKTR NKRMSDVSLG
ISHTFLKDDK NPALISFLES 151 TVYEKSRNKA SSGKSWLIGA TTYKAIDPVV
LSLTAAYRIN GSKTLSSNTK 201 YKAGNYWMLN PNISFAANDR ISLTGGIQWL
GKQPDRLDGK KESARNTSTY 251 AHFGAGFGFT KTTALNASAR FNVSGQSSSE
LKFGVQHTF* m587/a587 95.2% identity in 289 aa overlap 10 20 30 40
50 60 m587.pep
MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| a587
MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ 10 20
30 40 50 60 70 80 90 100 110 120 m587.pep
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNSKTR
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| a587
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNGKTR 70 80
90 100 110 120 130 140 150 160 170 180 m587.pep
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPIV
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a587
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPVV 130
140 150 160 170 180 190 200 210 220 230 240 m587.pep
LSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAANDRISLTGGIQWLGRQPDRTDGK
||||||||||||||||:: :||:||| :|||||||||||||||||||||||:|||| ||| a587
LSLTAAYRINGSKTLSSNTKYKAGNYWMLNPNISFAANDRISLTGGIQWLGKQPDRLDGK 190
200 210 220 230 240 250 260 270 280 290 m587.pep
RESSRNTSTYAHFGAGFGFTKTTALNASARFNVSGQSSSELKFGVQHTFX
:||:|||||||||||||||||||||||||||||||||||||||||||||| a587
KESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQSSSELKFGVQHTFX 250 260 270 280
290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1821>:
TABLE-US-02188 g588.seq 1 atgcttaaac atctcgcatt cctactgccc
gccatgatgt tcgccctccc 51 cgcccagacc gccgtcctaa gcccctatca
ggaaaccggc tgcacctacg 101 aaggcgggat cggaaaagac gggcttcctt
caggcaaagg catatggcgt 151 tgccgggatg ggcgcggtta taccggttca
ttcaaaaacg gcaaattcga 201 cgggcaaggc gtttataccg ttgccgccgg
ccgcgaagta tttctcgagc 251 cgttcaattc cgacagtacc aaattccgca
atatggcatt gtcgggcacg 301 ttcaaacaag gcttggcaca cggcaggttc
gccgcctcgc aaaacggcga 351 aaccctcttt tattatgaaa tgcgaacacg
gcatgattaa
This corresponds to the amino acid sequence <SEQ ID 1822; ORF
588.ng>:
TABLE-US-02189 g588.pep.. 1 MLKHLAFLLP AMMFALPAQT AVLSPYQETG
CTYEGGIGKD GLPSGKGIWR 51 CRDGRGYTGS FKNGKFDGQG VYTVAAGREV
FLEPFNSDST KFRNMALSGT 101 FKQGLAHGRF AASQNGETLF YYEMRTRHD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1823>:
TABLE-US-02190 m588.seq.. 1 ATGCTTAAAC ATCTCGCATT CCTACTGCCC
GCCATGATGT TCGCCCTCCC 51 CACTTCGGCC GCCGTCCTGA CTTCCTATCA
AGAACCAGGC TGCACCTACG 101 ACGGCAATGT CGGCAAAGAC GGTAAACCCG
CCGGCAAAGG CACATGGCGC 151 TGCCAAGACG GGCGCAACTA TACCGGTTCG
TTTAAAAACG GCAAATTCGA 201 CGGGCAAGGC GTTTATACCG TTGCCGCCAA
CCGCGAAATA TTTATCGAAC 251 CGTTCAATTC CGACAGTACC AAATTCCGCA
ACATGGTACT CTCGGGCACG 301 TTCAAAAAAG GCTTGGCACA CGGCAGATTT
ACCGTCTCGC AAAACGGCGA 351 AACCCTCTTC ATTATGAAAT GCGAAAACGG
CATGATTAAA GAAGTGAAAC 401 TGCCCAAAAA CAAATAA
This corresponds to the amino acid sequence <SEQ ID 1824; ORF
588>:
TABLE-US-02191 m588.pep.. 1 MLKHLAFLLP AMMFALPTSA AVLTSYQEPG
CTYDGNVGKD GKPAGKGTWR 51 CQDGRNYTGS FKNGKFDGQG VYTVAANREI
FIEPFNSDST KFRNMVLSGT 101 FKKGLAHGRF TVSQNGETLF IMKCENGMIK
EVKLPKNK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02192 m588/g588 82.5% identity in 120 aa overlap 10 20 30
40 50 60 m588.pep
MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGNVGKDGKPAGKGTWRCQDGRNYTGS
|||||||||||||||||:::|||: ||| ||||:|::|||| |:||| |||:|||:|||| g588
MLKHLAFLLPAMMFALPAQTAVLSPYQETGCTYEGGIGKDGLPSGKGIWRCRDGRGYTGS 10 20
30 40 50 60 70 80 90 100 110 120 m588.pep
FKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFKKGLAHGRFTVSQNGETLF
||||||||||||||||:||:|:|||||||||||||:||||||:|||||||::|||||||| g588
FKNGKFDGQGVYTVAAGREVFLEPFNSDSTKFRNMALSGTFKQGLAHGRFAASQNGETLF 70 80
90 100 110 120 130 139 m588.pep IMKCENGMIKEVKLPKNKX g588 YYEMRTRHDX
130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1825>:
TABLE-US-02193 a588.seq 1 ATGCTTAAAC ATCTCGCATT CCTACTGCCC
GCCATGATGT TCGCCCTCCC 51 CGCCGCGTCC GCCGTTCTGA CTTCCTATCA
AGAACCCGGC TGCACCTACG 101 AAGGCGATGT CGGCAAAGAC GGTAAACCCG
CCGGCAAAGG CACATGGCGC 151 TGCCAAGACG GGCGCAACTA TACCGGTTCG
TTTAAAAATG GCAAATTCGA 201 CGGACAAGGC GTTTATACCG TTGCCGCCAA
CCGCGAAATA TTTATCGAAC 251 CGTTCAATTC CGACAGTACC AAATTCCGCA
ACATGGTACT CTCGGGCACA 301 TTCAAAAAAG GCTTGGCACA CGGCAGATTT
ACCGTCTCGC AAAACGGCGA 351 AACCCTCTTC ATTATGAAAT GCGAAAACGG
CATGATTAAA GAAGTGAAGC 401 TGCCCAAAAA CAAATAA
This corresponds to the amino acid sequence <SEQ ID 1826; ORF
588.a>:
TABLE-US-02194 a588.pep 1 MLKHLAFLLP AMMFALPAAS AVLTSYQEPG
CTYEGDVGKD GKPAGKGTWR 51 CQDGRNYTGS FKNGKFDGQG VYTVAANREI
FIEPFNSDST KFRNMVLSGT 101 FKKGLAHGRF TVSQNGETLF IMKCENGMIK
EVKLPKNK* m588/a588 96.4% identity in 138 aa overlap 10 20 30 40 50
60 m588.pep
MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGNVGKDGKPAGKGTWRCQDGRNYTGS
|||||||||||||||||:::|||||||||||||:|:|||||||||||||||||||||||| a588
MLKHLAFLLPAMMFALPAASAVLTSYQEPGCTYEGDVGKDGKPAGKGTWRCQDGRNYTGS 10 20
30 40 50 60 70 80 90 100 110 120 m588.pep
FKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFKKGLAHGRFTVSQNGETLF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a588
FKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFKKGLAHGRFTVSQNGETLF 70 80
90 100 110 120 130 139 m588.pep IMKCENGMIKEVKLPKNKX
||||||||||||||||||| a588 IMKCENGMIKEVKLPKNKX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1827>:
TABLE-US-02195 g589.seq.. 1 atgcaacaaa aaatccgttt ccaaatcgag
gcgatgacct gtcaggcatg 51 tgcttcgcgc attgaaaaag tgttgaacaa
aaaagatttt gtcgaatcgg 101 cgggagtgaa ctttgccagt gaggaagcgc
aggttacgtt tgacggcagc 151 aaaacctcgg ttgccgacat tgccaaaatc
attgagaaaa ccggttacgg 201 cgcgaaggaa aaaacggaag atacattgcc
gcaacctgaa gcagaacacc 251 atatcggctg gcggttgtgg cttttgctga
ccatcaatat cccgttcctt 301 atcggtatgg tagggatgat gctaaaaggg
ctgaattgga cacggcacga 351 ttggatgatt ccgcctgtat ggcagtttgt
actggcaagc atagtgcaac 401 tttggctggc aatcccgttt tacaaaagcg
cgtgggcaag cattaaaggc 451 gggctggcga atatggacgt actcgttacc
atcggcacgg tgtcgattta 501 cctgtattcc gtttatatgc tgtttttcag
ttcgcatgcg gcgcacggta 551 tggcgcatgt gtattttgaa gcgggcgtga
tggtgatcgg ttttgtgtcg 601 ctgggtaagt ttttggaaca ccgcaccaaa
aaatccagcc tgaacagctt 651 gggcttactg ctaaaactca cgccgaccca
agtcaacgtg caacgcaacg 701 gcgaatggaa acaactgccc atcgaccaag
tgcaaatcgg cgaccttatc 751 cgcaccaacc acggcgaacg catcgctgcc
gacggcatta tcgaaagcgg 801 cagcggttgg gcggacgaaa gccaccttac
cggcgaatcc aatcccgaag 851 agaaaaaggc gggcggcaaa gtgttggcgg
gcgcgctgat gaccgaaggc 901 agcgtggtgt accgcgccgc gcagctcggc
agccaaaccc tgctcggcga 951 catgatgaac gcgctctctg aagcacaagg
cagtaaagca ccgattgcgc 1001 gcgtggccga taaagcggcg gcggtatttg
tgccaactgt cgtgggcatc 1051 gcgcttctga cttttatcgt tgcttggctg
attaagggcg attggacggt 1101 cgcactgatg cacgccgttg ccgttttggt
gattgcctgc ccgtgcgcgc 1151 tcggtctggc gacccctgcc gcgattatgg
tcggcatggg caaagcggtg 1201 aaacacggca tttggtttaa agacgcggcg
gcaatggagg aagcagccca 1251 cgtcgatgcc gtcgtattgg acaaaaccgg
tacgctgacc gaaggcaggc 1301 cgcaggttgc cgccgtttat tacgttcccg
acagcggctt tgacgaagac 1351 gctttgtacc gcatcgccgc cgccgtcgag
caaaacgccg cccacccgct 1401 cgcccgcgcc atcgtctccg ccgcacaagc
gcgcggtttg gagattcccg 1451 ctgcacaaaa tgcgcaaacc gttgtcggag
caggcattac cgccgaagtg 1501 gaaggcgtgg gtttggtgaa atcaggcaaa
gccgaatttg ccgaactgac 1551 cttgccgaag ttttcagacg gcgtttggga
aatcgccagt gcggttaccg 1601 tatctgtaaa cggcaaaccg atcggcgcat
tcgcactctc cgacgcgttg 1651 aaagccgata ccgccgaagc cataggccgt
ctgaaaaaac acaatatcga 1701 tgtctatatt atgagcggcg ataaccaaag
tacggtcgaa tacgtcgcca 1751 aacaactggg catcgcacac gccttcggta
atatgagtcc gtgcgacaaa 1801 gccgccgaag tgcagaaact caaagccgcc
ggcaaaaccg tggcgatggt 1851 cggcgacggc atcaacgacg cgcccgcgct
tgccgccgcc aacgtcagct 1901 tcgccatgaa aggcggtgcg gacgttgccg
aacacaccgc ctccgccacg 1951 ctgatgcagc attcggtcaa tcagctcgcc
gatgccctgc tgatatcgca 2001 ggcaacgttg gaaaacatca agcaaaacct
atttttcgcc ttcttctaca 2051 atatattggg cattccgctc gccgcgctcg
gctttttaaa tcccgtcata 2101 gcaggcgcgg caatggcggc aagctcggtt
tcggtattgg gcaatgccct 2151 gcgcctgaaa tgggtaaaaa tcgattga
This corresponds to the amino acid sequence <SEQ ID 1828; ORF
589.ng>:
TABLE-US-02196 g589.pep.. 1 MQQKIRFQIE AMTCQACASR IEKVLNKKDF
VESAGVNFAS EEAQVTFDGS 51 KTSVADIAKI IEKTGYGAKE KTEDTLPQPE
AEHHIGWRLW LLLTINIPFL 101 IGMVGMMLKG LNWTRHDWMI PPVWQFVLAS
IVQLWLAIPF YKSAWASIKG 151 GLANMDVLVT IGTVSIYLYS VYMLFFSSHA
AHGMAHVYFE AGVMVIGFVS 201 LGKFLEHRTK KSSLNSLGLL LKLTPTQVNV
QRNGEWKQLP IDQVQIGDLI 251 RTNHGERIAA DGIIESGSGW ADESHLTGES
NPEEKKAGGK VLAGALMTEG 301 SVVYRAAQLG SQTLLGDMMN ALSEAQGSKA
PIARVADKAA AVFVPTVVGI 351 ALLTFIVAWL IKGDWTVALM HAVAVLVIAC
PCALGLATPA AIMVGMGKAV 401 KHGIWFKDAA AMEEAAHVDA VVLDKTGTLT
EGRPQVAAVY YVPDSGFDED 451 ALYRIAAAVE QNAAHPLARA IVSAAQARGL
EIPAAQNAQT VVGAGITAEV 501 EGVGLVKSGK AEFAELTLPK FSDGVWEIAS
AVTVSVNGKP IGAFALSDAL 551 KADTAEAIGR LKKHNIDVYI MSGDNQSTVE
YVAKQLGIAH AFGNMSPCDK 601 AAEVQKLKAA GKTVAMVGDG INDAPALAAA
NVSFAMKGGA DVAEHTASAT 651 LMQHSVNQLA DALLISQATL ENIKQNLFFA
FFYNILGIPL AALGFLNPVI 701 AGAAMAASSV SVLGNALRLK WVKID*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1829>:
TABLE-US-02197 m589.seq.. 1 ATGCAACAAA AAATCCGTTT CCAAATCGAA
GGCATGACCT GCCAGGCCTG 51 CGCTTCGCGC ATTGAAAAAG TGTTGAACAA
AAAAGATTTT GTCGAATCGG 101 CGGGGGTAAA CTTCGCCAGC GAAGAGGCGC
AGGTAGTGTT TGACGACAGC 151 AAAACCTCAG TAGCCGACAT TGCCAAAATC
ATTGAGAAAA CCGGTTACGG 201 CGCGAAGGAA AAAACGGAAG ATACATTGCC
GCAACCCGAA GCAGAACACC 251 ATATCGGCTG GCGGCTGTGG CTGCTGTTCA
CCATCAACGT CCCGTTCCTT 301 ATCGGCATGG CGGGGATGAT GATCGGCAGA
CACGATTGGA TGATTCCGCC 351 GTTGTGGCAG TTCGCATTGG CAAGCGTGGT
GCAGCTTTGG CTGGCAATCC 401 CGTTTTACAA AAGCGCGTGG GCGAGCATTA
AGGGCGGACT GGCGAATATG 451 GACGTGCTGG TTACCATCGG CACGGTCTCG
ATTTACCTGT ATTCCGTCTA 501 TATGCTGTTT TTCAGCCCGC ACGCGGCGTA
CGGTATGGCG CATGTGTATT 551 TTGAAGTGGG CGTGATGGTG ATCGGTTTTG
TGTCACTGGG TAAATTTTTG 601 GAACACCGTA CCAAAAAATC CAGCCTCAAC
AGCTTGGGCT TGCTGCTCAA 651 ACTTACACCA ACCCAAGTCA ACGTGCAACG
CAACGGCGAA TGGAAACAGC 701 TTCCCATCGA CCAAGTGCAA ATCGGCGACC
TTATCCGCGC CAACCACGGC 751 GAACGCATTG CCGCAGACGG CATCATTGAA
AGCGGCAGCG GTTGGGCGGA 801 CGAGAGCCAT CTTACCGGCG AATCCAATCC
TGAAGAAAAA AAGGCGGGCG 851 GCAAAGTGTT GGCGGGCGCG TTAATGACCG
AAGGCAGTGT GGTGTACCGC 901 GCCACGCAGC TCGGCAGCCA AACCCAGCTC
GGCGACATGA TGAACGCGCT 951 CTCTGAAGCA CAAGGCAGTA AAGCACCGAT
TGCGCGCGTA GCCGATAAAG 1001 CGGCTGCGGT ATTCGTGCCT GCCGTCGTGG
GCATTGCGTT GTTGACTTTT 1051 ATTGTTACTT GGCTGATTAA GGGCGATTGG
ACGGTTGCGC TGATGCACGC 1101 CGTCGCCGTT TTGGTGATTG CCTGCCCGTG
CGCGCTGGGT CTGGCAACCC 1151 CTGCCGCGAT TATGGTCGGT ATGGGCAAAG
CGGTTAAACA CGGTATTTGG 1201 TTTAAAGACG CGGCAGCAAT GGAGGAAGCC
GCCCACGTCG ATGCCGTCGT 1251 GTTGGACAAA ACCGGTACGC TGACCGAAGG
CAGCCCGCAG GTTGCCGCCG 1301 TTTATTGCGT TCCCGACAGC GGCTTTGACG
AAGACGCTTT GTACCGCATC 1351 GCCGCCGCCG TCGAACAAAA CGCCGCCCAT
CCGCTCGCCC GTGCCATCGT 1401 CTCCGCCGCC CAAGCGCGCG GTTTGGACAT
TCCCGCCGCA CAAAACGCAC 1451 AAACCGTTGT CGGCGCAGGC ATTACCGCCG
AAGTGGAAGG CGTGGGTTTG 1501 GTGAAAGCAG GCAAAGCCGA ATTTGCCGAA
CTGGCCTTGC CGAAGTTTTT 1551 AGACGGCGTT TGGGATATTG CAAGCATTGT
TGCGGTCTCA GTCGATAACA 1601 AACCCATCGG CGCATTCGCA CTTGCCGACG
CGTTGAAAGC CGATACCGCC 1651 GAAGCCATAG GCCGTCTGAA AAAACACAAT
ATCGATGTCT ATATTATGAG 1701 CGGCGACAAC CAAGGCACGG TCGAATACGT
CGCCAAACAA CTGGGCATCG 1751 CACACGCCTT CGGCAACATG AGTCCGCGCG
ATAAAGCTGC CGAAGTGCAA 1801 AAACTCAAAG CCGCCGGCAA AACCGTGGCG
ATGGTCGGCG ACGGCATCAA 1851 CGACGCGCCC GCGCTTGCCG CCGCTAACGT
CAGCTTCGCC ATGAAAGGCG 1901 GAGCGGACGT TGCCGAACAT ACCGCATCCG
CCACGCTGAT GCAGCATTCG 1951 GTCAACCAAC TCGCCGATGC TCTGCTGGTG
TCGCAAGCCA CTTTGAAAAA 2001 CATCAAGCAA AACCTGTTTT TCGCCTTCTT
CTACAATATT TTGGGCATTC 2051 CTCTCGCCGC GCTTGGCTTT TTAAATCCCG
TCATCGCTGG CGCGGCAATG 2101 GCGGCAAGCT CGGTTTCCGT GTTGAGCAAT
GCCTTGCGCC TGAAACGGGT 2151 AAAAATCGAT TAG
This corresponds to the amino acid sequence <SEQ ID 1830; ORF
589>:
TABLE-US-02198 m589.pep.. 1 MQQKIRFQIE GMTCQACASR IEKVLNKKDF
VESAGVNFAS EEAQVVFDDS 51 KTSVADIAKI IEKTGYGAKE KTEDTLPQPE
AEHHIGWRLW LLFTINVPFL 101 IGMAGMMIGR HDWMIPPLWQ FALASVVQLW
LAIPFYKSAW ASIKGGLANM 151 DVLVTIGTVS IYLYSVYMLF FSPHAAYGMA
HVYFEVGVMV IGFVSLGKFL 201 EHRTKKSSLN SLGLLLKLTP TQVNVQRNGE
WKQLPIDQVQ IGDLIRANHG 251 ERIAADGIIE SGSGWADESH LTGESNPEEK
KAGGKVLAGA LMTEGSVVYR 301 ATQLGSQTQL GDMMNALSEA QGSKAPIARV
ADKAAAVFVP AVVGIALLTF 351 IVTWLIKGDW TVALMHAVAV LVIACPCALG
LATPAAIMVG MGKAVKHGIW 401 FKDAAAMEEA AHVDAVVLDK TGTLTEGSPQ
VAAVYCVPDS GFDEDALYRI 451 AAAVEQNAAH PLARAIVSAA QARGLDIPAA
QNAQTVVGAG ITAEVEGVGL 501 VKAGKAEFAE LALPKFLDGV WDIASIVAVS
VDNKPIGAFA LADALKADTA 551 EAIGRLKKHN IDVYIMSGDN QGTVEYVAKQ
LGIAHAFGNM SPRDKAAEVQ 601 KLKAAGKTVA MVGDGINDAP ALAAANVSFA
MKGGADVAEH TASATLMQHS 651 VNQLADALLV SQATLKNIKQ NLFFAFFYNI
LGIPLAALGF LNPVIAGAAM 701 AASSVSVLSN ALRLKRVKID *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02199 m589/g589 94.2% identity in 725 aa overlap 10 20 30
40 50 60 m589.pep
MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVVFDDSKTSVADIAKI
||||||||||:||||||||||||||||||||||||||||||||||:|| ||||||||||| g589
MQQKIRFQIEAMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVTFDGSKTSVADIAKI 10 20
30 40 50 60 70 80 90 100 1 110 m589.pep
IEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIGMAGMMIG-----RHDWMI
||||||||||||||||||||||||||||||||:|||:||||||:|||: |||||| g589
IEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLTINIPFLIGMVGMMLKGLNWTRHDWMI 70 80
90 100 110 120 120 130 140 150 160 170 m589.pep
PPLWQFALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSPHA
||:|||:|||:|||||||||||||||||||||||||||||||||||||||||||||| || g589
PPVWQFVLASIVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSSHA 130
140 150 160 170 180 180 190 200 210 220 230 m589.pep
AYGMAHVYFEVGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQRNGEWKQLP
|:||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g589
AHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQRNGEWKQLP 190
200 210 220 230 240 240 250 260 270 280 290 m589.pep
IDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEG
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| g589
IDQVQIGDLIRTNHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEG 250
260 270 280 290 300 300 310 320 330 340 350 m589.pep
SVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLTFIVTWL
||||||:|||||| ||||||||||||||| |||||||||||||||:|||||||||||:|| g589
SVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIARVADKAAAVFVPTVVGIALLTFIVAWL 310
320 330 340 350 360 360 370 380 390 400 410 m589.pep
IKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g589
IKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDA 370
380 390 400 410 420 420 430 440 450 460 470 m589.pep
VVLDKTGTLTEGSPQVAAVYCVPDSGFDEDALYRIAAAVEQNAAHPLARAIVSAAQARGL
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| g589
VVLDKTGTLTEGRPQVAAVYYVPDSGFDEDALYRIAAAVEQNAAHPLARAIVSAAQARGL 430
440 450 460 470 480 480 490 500 510 520 530 m589.pep
DIPAAQNAQTVVGAGITAEVEGVGLVKAGKAEFAELALPKFLDGVWDIASIVAVSVDNKP
:||||||||||||||||||||||||||:||||||||:|||| ||||:||| |:|||::|| g589
EIPAAQNAQTVVGAGITAEVEGVGLVKSGKAEFAELTLPKFSDGVWEIASAVTVSVNGKP 490
500 510 520 530 540 540 550 560 570 580 590 m589.pep
IGAFALADALKADTAEAIGRLKKHNIDVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDK
||||||:|||||||||||||||||||||||||||||:|||||||||||||||||||| || g589
IGAFALSDALKADTAEAIGRLKKHNIDVYIMSGDNQSTVEYVAKQLGIAHAFGNMSPCDK 550
560 570 580 590 600 600 610 620 630 640 650 m589.pep
AAEVQKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g589
AAEVQKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLA 610
620 630 640 650 660 660 670 680 690 700 710 m589.pep
DALLVSQATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLK
||||:|||||:||||||||||||||||||||||||||||||||||||||||||:|||||| g589
DALLISQATLENIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLGNALRLK 670
680 690 700 710 720 720 m589.pep RVKIDX ||||| g589 WVKIDX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1831>:
TABLE-US-02200 a589.seq 1 ATGCAACAAA AAGTCCGTTT CCAAATCGAA
GGCATGACCT GCCAGGCATG 51 TGCTTCGCGC ATTGAAAAAG TGTTGAACAA
AAAAGATTTT GTCGAATCGG 101 CGGGGGTAAA CTTCGCCAGC GAAGAGGCTC
AGGTAGTGTT TGACGACAGC 151 AAAACCTCAG TAGCCGACAT TGCCAAAATC
ATTGAGAAAA CCGGTTACGG 201 CGCGAAGGAA AAAACGGAAG ATACATTGCC
GCAACCCGAA GCAGAACACC 251 ATATCGGCTG GAGGTTGTGG CTTTTGCTGG
CCATCAATAT CCCGTTCCTT 301 ATCGGTATGG TAGGGATGAT GCTAAAAGGG
CTGAATTGGA CACGGCATGA 351 TTGGATGTTG TCGCCCTTGT TGCAGTTTGC
ATTGGCGAGT GTGGTGCAGC 401 TTTGGCTGGC GGTGCCATTT TACAAAAGCG
CGTGGGCGAG CATTAAAGGC 451 GGGCTGGCGA ATATGGACGT ACTCGTTACC
ATCGGCACGG TCTCGATTTA 501 CCTGTATTCC GTCTATATGC TGTTTTTCAG
CCCGCACGCG GCGTACGGTA 551 TGGCGCATGT GTATTTTGAA GTAGGCATAA
TGGTGATTGG TTTTGTGTCA 601 CTGGGTAAAT TTTTGGAACA CCGCACCAAA
AAATCCAGCC TGAACAGCTT 651 GGGCTTGCTG CTCAAACTCA CGCCAACCCA
AGTCAACGTG CAACGCGATG 701 GCGAATGGCG GCAGCTACCC ATCGACCAAG
TGCAAATCGG CGACCTAATC 751 CGCGCCAATC ACGGCGAACG CATTGCCGCC
GACGGCATCA TAGAAAGCGG 801 CAGCGGCTGG GCGGACGAAA GCCATCTTAC
CGGCGAATCC AATCCCGAAG 851 AGAAAAAGGC AGGCGGCAAA GTATTGGCGG
GCGCGCTGAT GACTGAAGGC 901 AGCGTGGTGT ACCGCGCCGC GCAGCTCGGC
AGCCAAACCC TGCTCGGCGA 951 CATGATGAAC GCGCTCTCCG AAGCGCAAGG
CAGTAAAGCA CCGATTGCGC 1001 GTGTGGCGGA CAAGGCGGCG GCGGTATTCG
TGCCTGCCGT TGTGGGCATC 1051 GCACTTTTGA CTTTTATCGC TACTTGGCTG
ATTAAGGGCG ATTGGACGCT 1101 CGCATTGATG CACGCCGTCG CCGTTTTGGT
GATTGCCTGC CCGTGTGCAC 1151 TCGGTTTGGC AACCCCTGCT GCGATTATGG
TCGGTATGGG CAAAGCGGTT 1201 AAACACGGTA TTTGGTTTAA AGACGCGGCA
GCAATGGAAG AAGCCGCCCA 1251 CGTTGATGCC GTCGTGCTGG ACAAAACCGG
CACGCTGACC GAAGGCAAGC 1301 CGCAGGTTGC CGCCGTTTAT TGTGTTCCCG
ACAGCGGCTT TGACGAAGAC 1351 GCTTTGTACC GCATCGCCGC CGCCGTCGAA
CAAAACGCCG CCCATCCGCT 1401 CGCCCGTGCC ATCGTCTCCG CCGCCCAGGC
GCGCGGTTTG GAGATTCCCA 1451 CCGCACAAAA TGCCCAAACC ATTGTCGGCG
CGGGCATTAC CGCCGAAGTA 1501 AAAGGCGCGG GTTTGGTAAA AGCAGGCAAA
GCCGAATTTG CCGAACTGAC 1551 CTTGCCGAAG TTTTCAGACG GCGTTTGGGA
AATCGCCAGT GTGGTTGCCG 1601 TATCTGTAAA CGGCAAACCT ATCGGCGCAT
TCGCACTCGC CGACGCGTTG 1651 AAAGCCGATA CCGCCGAAGC CATAGGCCGT
CTGAAAAAAC ACAATATCGA 1701 TGTCTATATT ATGAGCGGCG ATAACCAAGG
CACGGTCGAG TACGTCGCCA 1751 AACAACTGGG CATCGCACAC GCCTTCGGTA
ATATGAGTCC GCGCGACAAA 1801 GCCGCCGAAG TGCAGAAACT CAAAGCCGCC
GGCAAAACCG TGGCGATGGT 1851 CGGCGACGGC ATCAACGACG CGCCCGCGCT
CGCCGCCGCC AACGTCAGCT 1901 TCGCCATGAA AGGCGGTGCA GACGTTGCCG
AACACACCGC ATCCGCCACA 1951 CTGATGCAGC ATTCGGTCAA CCAGCTCGCC
GATGCGCTAT CGGTATCGCG 2001 AGCGACGTTG AAAAACATCA AGCAAAACCT
GTTTTTCGCC TTCTTCTACA 2051 ATATTTTGGG CATTCCGCTC GCCGCGCTCG
GCTTTTTAAA CCCCGTCATC 2101 GCAGGCGCGG CAATGGCGGC AAGCTCGGTT
TCCGTGTTGA GCAACGCCTT 2151 GCGCCTGAAA CGGGTAAAAA TCGATTGA
This corresponds to the amino acid sequence <SEQ ID 1832; ORF
589.a>:
TABLE-US-02201 a589.pep 1 MQQKVRFQIE GMTCQACASR IEKVLNKKDF
VESAGVNFAS EEAQVVFDDS 51 KTSVADIAKI IEKTGYGAKE KTEDTLPQPE
AEHHIGWRLW LLLAINIPFL 101 IGMVGMMLKG LNWTRHDWML SPLLQFALAS
VVQLWLAVPF YKSAWASIKG 151 GLANMDVLVT IGTVSIYLYS VYMLFFSPHA
AYGMAHVYFE VGIMVIGFVS 201 LGKFLEHRTK KSSLNSLGLL LKLTPTQVNV
QRDGEWRQLP IDQVQIGDLI 251 RANHGERIAA DGIIESGSGW ADESHLTGES
NPEEKKAGGK VLAGALMTEG 301 SVVYRAAQLG SQTLLGDMMN ALSEAQGSKA
PIARVADKAA AVFVPAVVGI 351 ALLTFIATWL IKGDWTLALM HAVAVLVIAC
PCALGLATPA AIMVGMGKAV 401 KHGIWFKDAA AMEEAAHVDA VVLDKTGTLT
EGKPQVAAVY CVPDSGFDED 451 ALYRIAAAVE QNAAHPLARA IVSAAQARGL
EIPTAQNAQT IVGAGITAEV 501 KGAGLVKAGK AEFAELTLPK FSDGVWEIAS
VVAVSVNGKP IGAFALADAL 551 KADTAEAIGR LKKHNIDVYI MSGDNQGTVE
YVAKQLGIAH AFGNMSPRDK 601 AAEVQKLKAA GKTVAMVGDG INDAPALAAA
NVSFAMKGGA DVAEHTASAT 651 LMQHSVNQLA DALSVSRATL KNIKQNLFFA
FFYNILGIPL AALGFLNPVI 701 AGAAMAASSV SVLSNALRLK RVKID* m589/a589
94.9% identity in 725 aa overlap 10 20 30 40 50 60 m589.pep
MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVVFDDSKTSVADIAKI
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
MQQKVRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVVFDDSKTSVADIAKI 10 20
30 40 50 60 70 80 90 100 1 110 m589.pep
IEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIGMAGMMIG-----RHDWMI
||||||||||||||||||||||||||||||||::||:||||||:|||: |||||||||: a589
IEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLAINIPFLIGMVGMMLKGLNWTRHDWML 70 80
90 100 110 120 120 130 140 150 160 170 m589.pep
PPLWQFALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSPHA ||
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||| a589
SPLLQFALASVVQLWLAVPFYKSAWASIKGGLANMDVLVTIGTVSIYLYSVYMLFFSPHA 130
140 150 160 170 180 180 190 200 210 220 230 m589.pep
AYGMAHVYFEVGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQRNGEWKQLP
||||||||||||:|||||||||||||||||||||||||||||||||||||||:|||:||| a589
AYGMAHVYFEVGIMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQRDGEWRQLP 190
200 210 220 230 240 240 250 260 270 280 290 m589.pep
IDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
IDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAGALMTEG 250
260 270 280 290 300 300 310 320 330 340 350 m589.pep
SVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLTFIVTWL
||||||:|||||| ||||||||||||||||||||||||||||||||||||||||||:||| a589
SVVYRAAQLGSQILLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLIFIATWL 310
320 330 340 350 360 360 370 380 390 400 410 m589.pep
IKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDA
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
IKGDWTLALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEEAAHVDA 370
380 390 400 410 420 420 430 440 450 460 470 m589.pep
VVLDKTGTLTEGSPQVAAVYCVPDSGFDEDALYRIAAAVEQNAAHPLARAIVSAAQARGL
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a589
VVLDKTGTLTEGKPQVAAVYCVPDSGFDEDALYRIAAAVEQNAAHPLARAIVSAAQARGL 430
440 450 460 470 480 480 490 500 510 520 530 m589.pep
DIPAAQNAQTVVGAGITAEVEGVGLVKAGKAEFAELALPKFLDGVWDIASIVAVSVDNKP
:||:||||||:|||||||||:|:|||||||||||||:|||| ||||:|||:|||||::|| a589
EIPTAQNAQTIVGAGITAEVKGAGLVKAGKAEFAELTLPKFSDGVWEIASVVAVSVNGKP 490
500 510 520 530 540 540 550 560 570 580 590 m589.pep
IGAFALADALKADTAEAIGRLKKHNIDVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
IGAFALADALKADTAEAIGRLKKHNIDVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDK 550
560 570 580 590 600 600 610 620 630 640 650 m589.pep
AAEVQKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
AAEVQKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQHSVNQLA 610
620 630 640 650 660 660 670 680 690 700 710 m589.pep
DALLVSQATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLK |||
||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a589
DALSVSRATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLK 670
680 690 700 710 720 720 m589.pep RVKIDX |||||| a589 RVKIDX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1833>:
TABLE-US-02202 g590.seq.. 1 atgaaaaaac ctttgatttc agttgcggca
gtattgctcg gcgttgcttt 51 gggtacacct tattatttgg gtgtcaaagc
agaagaaagt ctgacgcagc 101 agcaaaaaat attgcagaaa acgggctttt
tgaccgtcga atcgcaccag 151 tatgatcgag gctggtttac ctctacggaa
acgacggtca tccgtctgaa 201 acccgagttg ctgcataatg cgcagaaata
cctgccggat aacttgaaaa 251 tagtgttgga acagccggtt acgctggtaa
accatatcac gcacggccct 301 ttcgccggcg gattcggcac gcaggcgcac
attgaaaccg agttcaaata 351 cgcgcctgaa acggaaaaag ttttggaacg
cttttttggg aaacaagttc 401 cggtttccct tgccaatacc gtttatttca
acggcagcgg taaaatggaa 451 gtcagtgttc ccgctttcga ttatgaagaa
ctgtcgggca tcaggctgca 501 ctgggaaggc ctgacggggg aaacggttta
tcaaaaaggt ttcaaaagct 551 accgcaacag ctatgatgcg cccttgttca
aaatcaagct ggcagacaaa 601 ggcgatgccg cgtttgaaaa agcgcatttc
gattcggaaa cttcagacgg 651 catcaatccg cttgctttgg gcagcagcaa
tctgactttg gaaaaatttt 701 cgctcgaatg gaaagagggt gtcgattaca
acgtcaaatt gaacgaactg 751 gtcaacctcg ttaccgattt gcagatcggc
gcgtttatca atcccaacgg 801 cagcatcgca ccttccaaaa tcgaagtcgg
caagctggct ttttcaacca 851 agaccgggga atcgggcgcg tttatcgaca
gcgaagggcg gttccgtttc 901 gatacgttgg tgtacggcga tgaaaaatac
ggcccgctgg acatccatat 951 cgctgccgaa cacctcgatg cttctgcctt
aaccgtattg aaacgcaagt 1001 ttgcacaaat ttctgccaaa aaaatgactg
aggaacaaat ccgcaatgat 1051 ttgattgcgg cagtcaaagg cgatgcttcc
ggattattta cccatgaccc 1101 ggtactaaat atcaaaattt tccgtttcac
cctgcctcag ggaaaaattg 1151 atgtgggcgg aaaaatcatg tttaaaggca
tgaagaagga agatttgaac 1201 caattgggac tgatgttaaa gaaaaccgag
gcaaacatca gaatgagtat 1251 tcctcaaaaa atgttggaag atttggcggt
aagtcaggct ggaaatattt 1301 tcagtgtaaa tgccgaagat gaggcggaag
ccagagcaag cattgccgat 1351 attaatgaaa cattgcgcct gatggtggac
agtacggtcc aaagtatggc 1401 aagggaaaaa tatcttactt tagacggtaa
tcagattgat acggtcattt 1451 cccttaaaaa caacgccctg aagttaaacg
ggaaaacgct gcaaaatgaa 1501 cccgatcctg attttgacga gggagatatg
gtttccggcc agccgcatta 1551 a
This corresponds to the amino acid sequence <SEQ ID 1834; ORF
590.ng>:
TABLE-US-02203 g590.pep.. 1 MKKPLISVAA VLLGVALGTP YYLGVKAEES
LTQQQKILQK TGFLTVESHQ 51 YDRGWFTSTE TTVIRLKPEL LHNAQKYLPD
NLKIVLEQPV TLVNHITHGP 101 FAGGFGTQAH IETEFKYAPE TEKVLERFFG
KQVPVSLANT VYFNGSGKME 151 VSVPAFDYEE LSGIRLHWEG LTGETVYQKG
FKSYRNSYDA PLFKIKLADK 201 GDAAFEKAHF DSETSDGINP LALGSSNLTL
EKFSLEWKEG VDYNVKLNEL 251 VNLVTDLQIG AFINPNGSIA PSKIEVGKLA
FSTKTGESGA FIDSEGRFRF 301 DTLVYGDEKY GPLDIHIAAE HLDASALTVL
KRKFAQISAK KMTEEQIRND 351 LIAAVKGDAS GLFTHDPVLN IKIFRFTLPQ
GKIDVGGKIM FKGMKKEDLN 401 QLGLMLKKTE ANIRMSIPQK MLEDLAVSQA
GNIFSVNAED EAEARASIAD 451 INETLRLMVD STVQSMAREK YLTLDGNQID
TVISLKNNAL KLNGKTLQNE 501 PDPDFDEGDM VSGQPH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1835>:
TABLE-US-02204 m590.seq (partial) .. 1 ..TGGTTTACCT CTATGGAAAC
GACGGTCATC CGTCTGAAAC CCGAGTTGCT 51 GAATAATGCC CGAAAATACC
TGCCGGATAA CCTGAAAACA GTGTTGGAAC 101 AGCCGGTTAC GCTGGTTAAC
CATATCACGC ACGGCCCTTT CGCCGGCGGA 151 TTCGGCACGC AGGCGTACAT
TGAAACCGAG TTCAAATACG CGCCTGAAAC 201 GGAAAAAGTT CTGGAACGCT
TTTTTGGAAA ACAAGTCCCG GCTTCCCTTG 251 CCAATACCGT TTATTTTAAC
GGCAGCGGTA AAATGGAAGT CAGTGTTCCC 301 GCCTTCGATT ATGAAGAGCT
GTCGGGCATc AG.CTGCACT GGGAAkGCCT 351 GACGGGAGAA ACGGTTTATC
AAAAAGGTTT CAAAAGCTAC CGGAACGGCT 401 ATGATGCCCC CTTGTTTAAA
ATCAAGCTGG CAGACAAAGG CGATGCCGCG 451 TTTGAAAAAG TGCATTTCGA
TTCGGAAACT TCAGACGGCA TCAATCCGCT 501 TGCTTTGGGC AGCAGCAATC
TGACCTTGGA AAAATTCTCC CTAGAATGGA 551 AAGAGGGTGT CGATTACAAC
GTCAAGTTAA ACGAACTGGT CAATCTTGTT 601 ACCGATTTGC AGATTGGCGC
GTTTATCAAT CCCAACGGCA GCATCGCACC 651 TTCCAAAATC GAAGTCGGCA
AACTGGCTTT TTCAACCAAG ACCGGGGAAT 701 CAGGCGCGTT TATCAACAGT
GAAGGGCAGT TCCGTTTCGA TACACTGGTG 751 TACGGCGATG AAAAATACGG
CCCGCTGGAC ATCCATATCG CTGCCGAACA 801 CCTCGATGCT TCTGCCTTAA
CCGTATTGAA ACGCAAGTTT GCACAAATTT 851 CCGCCAAAAA AATGACCGAG
GAACAAATCC GCAATGATTT GATTGCCGCC 901 GTCAAAGGAG AGGCTTCCGG
ACTGTTCACC AACAATCCCG TATTGGACAT 951 TAAAACTTTC CGATTCACGC
TGCCATCGGG AAAAATCGAT GTGGGCGGAA 1001 AAATCATGTT TAAAGACATG
AAGAAGGAAG ATTTGAATCA ATTGGGTTTG 1051 ATGCTGAAGA AAACCGAAGC
CGACATCAGA ATGAGTATTC CCCAAAAAAT 1101 GCTGGAAGAC TTGGCGGTCA
GTCAAGCAGG CAATATTTTC AGCGTCAATG 1151 CCGAAGATGA GGCGGAAGGC
AGGGCAAGTC TTGACGACAT CAACGAGACC 1201 TTGCGCCTGA TGGTGGACAG
TACGGTTCAG AGTATGGCAA GGGAAAAATA 1251 TCTGACTTTG AACGGCGACC
AGATTGATAC TGCCATTTCT CTGAAAAACA 1301 ATCAGTTGAA ATTGAACGGT
AAAACGTTGC AAAACGAACC GGAGCCGGAT 1351 TTTGATGAAG GCGGTATGGT
TTCAGAGCCG CAGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 1836; ORF
590>:
TABLE-US-02205 m590.pep..(partial) 1 ..WFTSMETTVI RLKPELLNNA
RKYLPDNLKT VLEQPVTLVN HITHGPFAGG 51 FGTQAYIETE FKYAPETEKV
LERFFGKQVP ASLANTVYFN GSGKMEVSVP 101 AFDYEELSGI XLHWEXLTGE
TVYQKGFKSY RNGYDAPLFK IKLADKGDAA 151 FEKVHFDSET SDGINPLALG
SSNLTLEKFS LEWKEGVDYN VKLNELVNLV 201 TDLQIGAFIN PNGSIAPSKI
EVGKLAFSTK TGESGAFINS EGQFRFDTLV 251 YGDEKYGPLD IHIAAEHLDA
SALTVLKRKF AQISAKKMTE EQIRNDLIAA 301 VKGEASGLFT NNPVLDIKTF
RFTLPSGKID VGGKIMFKDM KKEDLNQLGL 351 MLKKTEADIR MSIPQKMLED
LAVSQAGNIF SVNAEDEAEG RASLDDINET 401 LRLMVDSTVQ SMAREKYLTL
NGDQIDTAIS LKNNQLKLNG KTLQNEPEPD 451 FDEGGMVSEP QQ* m590/g590 93.1%
identity in 462 aa overlap 10 20 30 m590.pep
WFTSMETTVIRLKPELLNNARKYLPDNLKT |||| ||||||||||||:||:|||||||| g590
VKAEESLTQQQKILQKTGFLTVESHQYDRGWFTSTETTVIRLKPELLHNAQKYLPDNLKI 30 40
50 60 70 80 40 50 60 70 80 90 m590.pep
VLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPETEKVLERFFGKQVPASLANTVYFN
|||||||||||||||||||||||||:||||||||||||||||||||||||:||||||||| g590
VLEQPVTLVNHITHGPFAGGFGTQAHIETEFKYAPETEKVLERFFGKQVPVSLANTVYFN 90 100
110 120 130 140 100 110 120 130 140 150 m590.pep
GSGKMEVSVPAFDYEELSGIXLHWEXLTGETVYQKGFKSYRNGYDAPLFKIKLADKGDAA
|||||||||||||||||||| |||| ||||||||||||||||:||||||||||||||||| g590
GSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKGFKSYRNSYDAPLFKIKLADKGDAA 150
160 170 180 190 200 160 170 180 190 200 210 m590.pep
FEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFIN
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g590
FEKAHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFIN 210
220 230 240 250 260 220 230 240 250 260 270 m590.pep
PNGSIAPSKIEVGKLAFSTKTGESGAFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDA
||||||||||||||||||||||||||||:|||:||||||||||||||||||||||||||| g590
PNGSIAPSKIEVGKLAFSTKTGESGAFIDSEGRFRFDTLVYGDEKYGPLDIHIAAEHLDA 270
280 290 300 310 320 280 290 300 310 320 330 m590.pep
SALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKID
|||||||||||||||||||||||||||||||||:||||||::|||:|| ||||||:|||| g590
SALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGDASGLFTHDPVLNIKIFRFTLPQGKID 330
340 350 360 370 380 340 350 360 370 380 390 m590.pep
VGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEG
|||||||| ||||||||||||||||||:|||||||||||||||||||||||||||||||: g590
VGGKIMFKGMKKEDLNQLGLMLKKTEANIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEA 390
400 410 420 430 440 400 410 420 430 440 450 m590.pep
RASLDDINETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPD |||:
|||||||||||||||||||||||||:|:||||:|||||| ||||||||||||:|| g590
RASIADINETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPD 450
460 470 480 490 500 460 m590.pep FDEGGMVS-EPQQX |||| ||| :|: g590
FDEGDMVSGQPHX 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1837>:
TABLE-US-02206 a590.seq 1 ATGAAAAAAC CTTTGATTTC GGTTGCGGCA
GCATTGCTCG GCGTTGCTTT 51 GGGCACGCCT TATTATTTGG GTGTCAAAGC
CGAAGAAAGC TTGACGCAGC 101 AGCAAAAAAT ATTGCAGGAA GCGGGCTTCT
TGACCGTCGA ATCGCACCAA 151 TATGAGCGCG GCTGGTTTAC CTCTACGGAA
ACGACGGTCA TCCGCTTGAA 201 ACCCGAGTTG CTGCATAATG CGCAGAAATA
CCTGCCGGAT AACCTGAAAA 251 CAGTGTTGGA ACAGCCGGTT ACGCTGGTAA
ACCATATCAC GCACGGTCCT 301 TTTGCCGGCG GATTCGGCAC GCAGGCGTAC
ATTGAAACCG AGTTCAAATA 351 CGCGCCTGAA ACGGAAAAAG TTCTGGAACG
CTTTTTTGGA AAACAAGTCC 401 CGGTTTCCCT TGCCAATACC GTTTATTTTA
ACGGCAGCGG TAAAATGGAA 451 GTCAGTGTTC CCGCCTTCGA TTATGAAGAG
CTGTCGGGCA TCAGGCTGCA 501 CTGGGAAGGC CTGACGGGAG AAACGGTTTA
TCAAAAAGGT TTCAAAAGCT 551 ACCGGAACGG CTATGATGCC CCCTTGTTTA
AAATCAAGCT GGCAGACAAA 601 GGCGATGCCG CGTTTGAAAA AGTGCATTTC
GATTCGGAAA CTTCAGACGG 651 CATCAACCCG CTTGCTTTGG GCAGCAGCAA
TCTGACCTTG GAAAAATTTT 701 CCTTAGAATG GAAAGAGGGT GTCGATTACA
ACGTCAAGTT AAACGAACTG 751 GTCAATCTTG TTACCGATTT GCAGATTGGC
GCGTTTATCA ATCCCAACGG 801 CAGCATCGCA CCTTCCAAAA TCGAAGTCGG
CAAGCTGGCT TTTTCAACCA 851 AGACCGGGGA ATCGGGCGCG TTTATCGATA
GCGAAGGGCA GTTCCGTTTT 901 GGCACGCTGG TTTACGGCGA TGAAAAATAC
GGCCCTCTGG ACATCCATAT 951 CGCTGCCGAA CACCTCGATG CTTCTGCCTT
AACCGTATTG AAACGCAAGT 1001 TTGCACGAAT TTCTGCCAAA AAAATGACTG
AAGAACAAAT CCGCAATGAT 1051 TTGATTGCGG CAGTCAAAGG CGAGGCTTCC
GGATTATTTA CCCATAACCC 1101 AGTATTGGAC ATTAAAACTT TCCGATTCAC
GCTGCCATCG GGAAAAATCG 1151 ATGTGGGCGG AAAAATCATG TTTAAAGACA
TGAAGAAGGA AGATTTGAAC 1201 CAATTGGGTT TGATGCTGAA GAAAACCGAA
GCCGACATCA GAATGAGTAT 1251 TCCCCAAAAA ATGCTGGAAG ACTTGGCGGT
CAGTCAAGCA GGCAATATTT 1301 TCAGCGTCAA TGCCGAAGAT GAGGCGGAAG
GCAGGGCAAG TCTTGACGAC 1351 ATCAACGAGA CCTTGCGCCT GATGGTGGAC
AGTACGGTTC AGAGTATGGC 1401 AAGGGAAAAA TATCTGACTT TGAACGGCGA
CCAGATTGAT ACTGCCATTT 1451 CTCTGAAAAA CAATCAGTTG AAATTGAACG
GTAAAACGTT GCAAAACGAA 1501 CCGGAGCCGG ATTTTGATGA AGGCGGTATG
GTTTCAGAGC CGCAGCAGTA 1551 A
This corresponds to the amino acid sequence <SEQ ID 1838; ORF
590.a>:
TABLE-US-02207 a590.pep 1 MKKPLISVAA ALLGVALGTP YYLGVKAEES
LTQQQKILQE AGFLTVESHQ 51 YERGWFTSTE TTVIRLKPEL LHNAQKYLPD
NLKTVLEQPV TLVNHITHGP 101 FAGGFGTQAY IETEFKYAPE TEKVLERFFG
KQVPVSLANT VYFNGSGKME 151 VSVPAFDYEE LSGIRLHWEG LTGETVYQKG
FKSYRNGYDA PLFKIKLADK 201 GDAAFEKVHF DSETSDGINP LALGSSNLTL
EKFSLEWKEG VDYNVKLNEL 251 VNLVTDLQIG AFINPNGSIA PSKIEVGKLA
FSTKTGESGA FIDSEGQFRF 301 GTLVYGDEKY GPLDIHIAAE HLDASALTVL
KRKFARISAK KMTEEQIRND 351 LIAAVKGEAS GLFTHNPVLD IKTFRFTLPS
GKIDVGGKIM FKDMKKEDLN 401 QLGLMLKKTE ADIRMSIPQK MLEDLAVSQA
GNIFSVNAED EAEGRASLDD 451 INETLRLMVD STVQSMAREK YLTLNGDQID
TAISLKNNQL KLNGKTLQNE 501 PEPDFDEGGM VSEPQQ* m590/a590 97.8%
identity in 462 aa overlap 10 20 30 m590.pep
WFTSMETTVIRLKPELLNNARKYLPDNLKT |||| ||||||||||||:||:||||||||| a590
VKAEESLTQQQKILQEAGFLTVESHQYERGWFTSTETTVIRLKPELLHNAQKYLPDNLKT 30 40
50 60 70 80 40 50 60 70 80 90 m590.pep
VLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPETEKVLERFFGKQVPASLANTVYFN
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| a590
VLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPETEKVLERFFGKQVPVSLANTVYFN 90 100
110 120 130 140 100 110 120 130 140 150 m590.pep
GSGKMEVSVPAFDYEELSGIXLHWEXLTGETVYQKGFKSYRNGYDAPLFKIKLADKGDAA
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| a590
GSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKGFKSYRNGYDAPLFKIKLADKGDAA 150
160 170 180 190 200 160 170 180 190 200 210 m590.pep
FEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFIN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a590
FEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFIN 210
220 230 240 250 260 220 230 240 250 260 270 m590.pep
PNGSIAPSKIEVGKLAFSTKTGESGAFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDA
||||||||||||||||||||||||||||:||||||| ||||||||||||||||||||||| a590
PNGSIAPSKIEVGKLAFSTKTGESGAFIDSEGQFRFGTLVYGDEKYGPLDIHIAAEHLDA 270
280 290 300 310 320 280 290 300 310 320 330 m590.pep
SALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKID
|||||||||||:||||||||||||||||||||||||||||:||||||||||||||||||| a590
SALTVLKRKFARISAKKMTEEQIRNDLIAAVKGEASGLFTHNPVLDIKTFRFTLPSGKID 330
340 350 360 370 380 340 350 360 370 380 390 m590.pep
VGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a590
VGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEG 390
400 410 420 430 440 400 410 420 430 440 450 m590.pep
RASLDDINETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a590
RASLDDINETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPD 450
460 470 480 490 500 460 m590.pep FDEGGMVSEPQQX ||||||||||||| a590
FDEGGMVSEPQQX 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1839>:
TABLE-US-02208 m590-1.seq 1 ATGAAAAAAC CTTTGATTTC GGTTGCGGCA
GCATTGCTCG GCGTTGCTTT 51 GGGCACGCCT TATTATTTGG GTGTCAAAGC
CGAAGAAAGC TTGACGCAGC 101 AGCAAAAAAT ATTGCAGGAA ACGGGCTTCT
TGACCGTCGA ATCGCACCAA 151 TATGAGCGCG GCTGGTTTAC CTCTATGGAA
ACGACGGTCA TCCGTCTGAA 201 ACCCGAGTTG CTGAATAATG CCCGAAAATA
CCTGCCGGAT AACCTGAAAA 251 CAGTGTTGGA ACAGCCGGTT ACGCTGGTTA
ACCATATCAC GCACGGCCCT 301 TTCGCCGGCG GATTCGGCAC GCAGGCGTAC
ATTGAAACCG AGTTCAAATA 351 CGCGCCTGAA ACGGAAAAAG TTCTGGAACG
CTTTTTTGGA AAACAAGTCC 401 CGGCTTCCCT TGCCAATACC GTTTATTTTA
ACGGCAGCGG TAAAATGGAA 451 GTCAGTGTTC CCGCCTTCGA TTATGAAGAG
CTGTCGGGCA TCAGGCTGCA 501 CTGGGAAGGC CTGACGGGAG AAACGGTTTA
TCAAAAAGGT TTCAAAAGCT 551 ACCGGAACGG CTATGATGCC CCCTTGTTTA
AAATCAAGCT GGCAGACAAA 601 GGCGATGCCG CGTTTGAAAA AGTGCATTTC
GATTCGGAAA CTTCAGACGG 651 CATCAATCCG CTTGCTTTGG GCAGCAGCAA
TCTGACCTTG GAAAAATTCT 701 CCCTAGAATG GAAAGAGGGT GTCGATTACA
ACGTCAAGTT AAACGAACTG 751 GTCAATCTTG TTACCGATTT GCAGATTGGC
GCGTTTATCA ATCCCAACGG 801 CAGCATCGCA CCTTCCAAAA TCGAAGTCGG
CAAACTGGCT TTTTCAACCA 851 AGACCGGGGA ATCAGGCGCG TTTATCAACA
GTGAAGGGCA GTTCCGTTTC 901 GATACACTGG TGTACGGCGA TGAAAAATAC
GGCCCGCTGG ACATCCATAT 951 CGCTGCCGAA CACCTCGATG CTTCTGCCTT
AACCGTATTG AAACGCAAGT 1001 TTGCACAAAT TTCCGCCAAA AAAATGACCG
AGGAACAAAT CCGCAATGAT 1051 TTGATTGCCG CCGTCAAAGG AGAGGCTTCC
GGACTGTTCA CCAACAATCC 1101 CGTATTGGAC ATTAAAACTT TCCGATTCAC
GCTGCCATCG GGAAAAATCG 1151 ATGTGGGCGG AAAAATCATG TTTAAAGACA
TGAAGAAGGA AGATTTGAAT 1201 CAATTGGGTT TGATGCTGAA GAAAACCGAA
GCCGACATCA GAATGAGTAT 1251 TCCCCAAAAA ATGCTGGAAG ACTTGGCGGT
CAGTCAAGCA GGCAATATTT 1301 TCAGCGTCAA TGCCGAAGAT GAGGCGGAAG
GCAGGGCAAG TCTTGACGAC 1351 ATCAACGAGA CCTTGCGCCT GATGGTGGAC
AGTACGGTTC AGAGTATGGC 1401 AAGGGAAAAA TATCTGACTT TGAACGGCGA
CCAGATTGAT ACTGCCATTT 1451 CTCTGAAAAA CAATCAGTTG AAATTGAACG
GTAAAACGTT GCAAAACGAA 1501 CCGGAGCCGG ATTTTGATGA AGGCGGTATG
GTTTCAGAGC CGCAGCAGTA 1551 A
This corresponds to the amino acid sequence <SEQ ID 1840; ORF
590-1>:
TABLE-US-02209 m590-1.pep 1 MKKPLISVAA ALLGVALGTP YYLGVKAEES
LTQQQKILQE TGFLTVESHQ 51 YERGWFTSME TTVIRLKPEL LNNARKYLPD
NLKTVLEQPV TLVNHITHGP 101 FAGGFGTQAY IETEFKYAPE TEKVLERFFG
KQVPASLANT VYFNGSGKME 151 VSVPAFDYEE LSGIRLHWEG LTGETVYQKG
FKSYRNGYDA PLFKIKLADK 201 GDAAFEKVHF DSETSDGINP LALGSSNLTL
EKFSLEWKEG VDYNVKLNEL 251 VNLVTDLQIG AFINPNGSIA PSKIEVGKLA
FSTKTGESGA FINSEGQFRF 301 DTLVYGDEKY GPLDIHIAAE HLDASALTVL
KRKFAQISAK KMTEEQIRND 351 LIAAVKGEAS GLFTNNPVLD IKTFRFTLPS
GKIDVGGKIM FKDMKKEDLN 401 QLGLMLKKTE ADIRMSIPQK MLEDLAVSQA
GNIFSVNAED EAEGRASLDD 451 INETLRLMVD STVQSMAREK YLTLNGDQID
TAISLKNNQL KLNGKTLQNE 501 PEPDFDEGGM VSEPQQ* m590-1/g590 93.6%
identity in 516 aa overlap 10 20 30 40 50 60 m590-1.pep
MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFLTVESHQYERGWFTSME
||||||||||:||||||||||||||||||||||||||||:|||||||||||:|||||| | g590
MKKPLISVAAVLLGVALGTPYYLGVKAEESLTQQQKILQKTGFLTVESHQYDRGWFTSTE 10 20
30 40 50 60 70 80 90 100 110 120 m590-1.pep
TTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPE
|||||||||||:||:|||||||| |||||||||||||||||||||||||:|||||||||| g590
TTVIRLKPELLHNAQKYLPDNLKIVLEQPVTLVNHITHGPFAGGFGTQAHIETEFKYAPE 70 80
90 100 110 120 130 140 150 160 170 180 m590-1.pep
TEKVLERFFGKQVPASLANTVYFNGSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKG
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| g590
TEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKG 130
140 150 160 170 180 190 200 210 220 230 240 m590-1.pep
FKSYRNGYDAPLFKIKLADKGDAAFEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEG
||||||:||||||||||||||||||||:|||||||||||||||||||||||||||||||| g590
FKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGINPLALGSSNLTLEKFSLEWKEG 190
200 210 220 230 240 250 260 270 280 290 300 m590-1.pep
VDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEVGKLAFSTKTGESGAFINSEGQFRF
||||||||||||||||||||||||||||||||||||||||||||||||||||:|||:||| g590
VDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEVGKLAFSTKTGESGAFIDSEGRFRF 250
260 270 280 290 300 310 320 330 340 350 360 m590-1.pep
DTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGEAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g590
DTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGDAS 310
320 330 340 350 360 370 380 390 400 410 420 m590-1.pep
GLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQK
||||::|||:|| ||||||:|||||||||||| ||||||||||||||||||:|||||||| g590
GLFTHDPVLNIKIFRFTLPQGKIDVGGKIMFKGMKKEDLNQLGLMLKKTEANIRMSIPQK 370
380 390 400 410 420 430 440 450 460 470 480 m590-1.pep
MLEDLAVSQAGNIFSVNAEDEAEGRASLDDINETLRLMVDSTVQSMAREKYLTLNGDQID
|||||||||||||||||||||||:|||: |||||||||||||||||||||||||:|:||| g590
MLEDLAVSQAGNIFSVNAEDEAEARASIADINETLRLMVDSTVQSMAREKYLTLDGNQID 430
440 450 460 470 480 490 500 510 m590-1.pep
TAISLKNNQLKLNGKTLQNEPEPDFDEGGMVS-EPQQX |:|||||| ||||||||||||:||||||
||| :|: g590 TVISLKNNALKLNGKTLQNEPDPDFDEGDMVSGQPHX 490 500 510
a590/m590-1 98.3% identity in 516 aa overlap 10 20 30 40 50 60
a590.pep
MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQEAGFLTVESHQYERGWFTSTE
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| | m590-1
MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFLTVESHQYERGWFTSME 10 20
30 40 50 60 70 80 90 100 110 120 a590.pep
TTVIRLKPELLHNAQKYLPDNLKTVLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPE
|||||||||||:||:||||||||||||||||||||||||||||||||||||||||||||| m590-1
TTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFAGGFGTQAYIETEFKYAPE 70 80
90 100 110 120 130 140 150 160 170 180 a590.pep
TEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKG
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| m590-1
TEKVLERFFGKQVPASLANTVYFNGSGKMEVSVPAFDYEELSGIRLHWEGLTGETVYQKG 130
140 150 160 170 180 190 200 210 220 230 240 a590.pep
FKSYRNGYDAPLFKIKLADKGDAAFEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m590-1
FKSYRNGYDAPLFKIKLADKGDAAFEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEG 190
200 210 220 230 240 250 260 270 280 290 300 a590.pep
VDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEVGKLAFSTKTGESGAFIDSEGQFRF
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| m590-1
VDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEVGKLAFSTKTGESGAFINSEGQFRF 250
260 270 280 290 300 310 320 330 340 350 360 a590.pep
GTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFARISAKKMTEEQIRNDLIAAVKGEAS
||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| m590-1
DTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFAQISAKKMTEEQIRNDLIAAVKGEAS 310
320 330 340 350 360 370 380 390 400 410 420 a590.pep
GLFTHNPVLDIKTFRFTLPSGKIDVGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQK
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| m590-1
GLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQK 370
380 390 400 410 420 430 440 450 460 470 480 a590.pep
MLEDLAVSQAGNIFSVNAEDEAEGRASLDDINETLRLMVDSTVQSMAREKYLTLNGDQID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m590-1
MLEDLAVSQAGNIFSVNAEDEAEGRASLDDINETLRLMVDSTVQSMAREKYLTLNGDQID 430
440 450 460 470 480 490 500 510 a590.pep
TAISLKNNQLKLNGKTLQNEPEPDFDEGGMVSEPQQX
||||||||||||||||||||||||||||||||||||| m590-1
TAISLKNNQLKLNGKTLQNEPEPDFDEGGMVSEPQQX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1841>:
TABLE-US-02210 g591.seq 1 TTGCAAACCC TTCTAGCTTT TATCTTCGCC
ATCCTGATTT TGGTCAGCCT 51 GCACGAATTC GGACACTACA TCGTCGCCAG
GTTGTGCGGC GTCAAGGTTG 101 TGCGTTTTTC CGTCGGCTTC GGCAAACCGT
TTTTCACCCG AAAGCGCGGC 151 GACACCGAAT GGTGCCTCGC CCCGATTCCG
TTGGGCGGCT ACGTCAAAAT 201 GGTCGATACG CGCGAAGGCG AAGTATCAGA
AGCCGATTTA CCCTACGCTT 251 TTGACAAACA ACACCCCGCC AAGCGCATCG
CCATCGTCGC CGCCGGTCCG 301 CTGACCAACC TCGCActggc ggTTTTGCTG
TACGGACTGa gctTttcctt 351 cggcgtaaCC GAACTGCGGC CCtatgtcgg
cacagtcgaA cccgacaccg 401 ttgccgCCCG CACCGGCTTC caaagcggcg
acaaAATACa atccgtcaac 451 ggcgtTtccg tCCAAGACTG GAGCAGCGCG
CAAACCGAAA TCGTcctcAA 501 CCTCGAAGCC Ggcaaagtcg ccgtcggcgT
TCAGACGGCA TCGGGCGCGC 551 AAACCGTCCG CACCAtcgAT GCCGCAGGCA
CGCCGGAAGC CGGTAAAATC 601 GCAAAAAACC AAGGCTACAT CGGACTGATG
CCCTTTAAAA TCACAACCGT 651 TGCCGGCGGC GTGGAAAAAG GCAGCCCCGC
CGAAAAAGCA GGCCTGAAAC 701 CGGGCGACAG GCTGACTGCC GCCGACGGCA
AACCCATCGc ctcaTGGCAG 751 GAATGggcaa acctgACccg cCAAAGCCCg
ggcAAAAAAA Tcaccctgac 801 ctacgAaCGC GCcggacaaa cccaTAccgc
CGACATCCGC CccgATactg 851 TCGAAcagcc cgACCACACC CTGATCgggc
gcgTCGGCCT CCGtccgcaG 901 CCGGACAGGG CGTGGGACGC GCAAATCCGC
CGCAGCTACC GTCCGTCTGT 951 TGTCCGCGCA TTCGGCATGG GCTGGGAAAA
AACCGTTTCC CACTCGTGGA 1001 CAACCCTCAA ATTTTTCGGC AAACTAATCA
GCGGCAACGC CTCTGTCAGC 1051 CATATTTCCG GGCCGCTGAC CATTGCCGAC
ATTGCCGGAC AGTCCGCCGA 1101 ACTCGGCTTG CAAAGTTATT TGGAATTTTT
AGCGTTGGTC AGCATCAGCC 1151 TCGGCGTGCT GAACCTGCTG CCCGTCCCCG
TTTTGGACGG CGGGCACCTC 1201 GTGTTTTATA CTGTCGAATG GATACGCGGC
AAACCTTTGG GCGAACGTGT 1251 CCAAAACATC GGTTTGCGCT TCGGGCTCGC
CCTGATGATG CTGATGATGG 1301 CGGCCGCCTT CTTCAACGAC GTTACCCGGC
TGATCGGTTA G
This corresponds to the amino acid sequence <SEQ ID 1842; ORF
591.ng>:
TABLE-US-02211 g591.pep.. 1 LQTLLAFIFA ILILVSLHEF GHYIVARLCG
VKVVRFSVGF GKPFFTRKRG 51 DTEWCLAPIP LGGYVKMVDT REGEVSEADL
PYAFDKQHPA KRIAIVAAGP 101 LTNLALAVLL YGLSFSFGVT ELRPYVGTVE
PDTVAARTGF QSGDKIQSVN 151 GVSVQDWSSA QTEIVLNLEA GKVAVGVQTA
SGAQTVRTID AAGTPEAGKI 201 AKNQGYIGLM PFKITTVAGG VEKGSPAEKA
GLKPGDRLTA ADGKPIASWQ 251 EWANLTRQSP GKKITLTYER AGQTHTADIR
PDTVEQPDHT LIGRVGLRPQ 301 PDRAWDAQIR RSYRPSVVRA FGMGWEKTVS
HSWTTLKFFG KLISGNASVS 351 HISGPLTIAD IAGQSAELGL QSYLEFLALV
SISLGVLNLL PVPVLDGGHL 401 VFYTVEWIRG KPLGERVQNI GLRFGLALMM
LMMAAAFFND VTRLIG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1843>:
TABLE-US-02212 m591.seq 1 TTGCACACCC TTCTAGCTTT TATCTTCGCC
ATCCTGATTT TGGTCAGCCT 51 GCACGAGTTC GGACACTACA TCGTTGCCAG
ATTGTGCGGC GTCAAAGTCG 101 TACGCTTTTC CGTCGGCTTC GGCAAACCGT
TTTTCACCCG AAAGCGCGGC 151 GACACCGAAT GGTGCCTCGC CCCGATTCCG
TTGGGCGGTT ACGTCAAAAT 201 GGTCGATACG CGCGAAGGCG AAGTATCAGA
AGCCGATTTA CCCTACGCTT 251 TTGACAAACA ACACCCCGCC AAGCGCATCG
CCATCGTCGC CGCCGGCCCA 301 CTGACCAACC TCGCACTGGC GGTTTTGCTG
TACGGACTGA GCTTTTCCTT 351 CGGCGTAACC GAACTGCGCC CCTACGTCGG
CACAGTCGAA CCCGACACCA 401 TTGCCGCCCG CGCCGGCTTC CAAAGCGGCG
ACAAAATACA ATCCGTCAAC 451 GGCACACCCG TTGCAGATTG GGGCAGCGCG
CAAACCGAAA TCGTCCTCAA 501 CCTCGAAGCC GGCAAAGTCG CCGTCGGCGT
TCAGACGGCA TCGGGCGCGC 551 AAACCGTCCG CACCATCGAT GCCGCAGGCA
CGCCGGAAGC CGGTAAAATC 601 GCAAAAAACC AAGGCTACAT CGGACTGATG
CCCTTTAAAA TCACAACCGT 651 TGCCGGCGGC GTGGAAAAAG GCAGCCCCGC
CGAAAAAGCA GGCCTGAAAC 701 CGGGCGACAG GCTGACTGCC GCCGACGGCA
AACCCATCGC CTCATGGCAA 751 GAATGGGCAA ACCTGACCCG CCAAAGCCCC
GGCAAAAAAA TCACCCTGAA 801 CTACGAACGC GCCGGACAAA CCCATACCGC
CGACATCCGC CCCGATACTG 851 TCGAACAGTC CGACCACACC CTGATCGGGC
GCGTCGGCCT CCGTCCGCAG 901 CCGGACAGGG CGTGGGACGC GCAAATCCGC
CGCAGCTACC GTCCGTCTGT 951 TGTCCGCGCA TTCGGCATGG GCTGGGAAAA
AACCGTTTCC CACTCGTGGA 1001 CAACCCTCAA ATTTTTCGGC AAACTAATCA
GCGGCAACGC CTCCGTCAGC 1051 CATATTTCCG GGCCGCTGAC CATTGCCGAC
ATTGCCGGAC AGTCCGCCGA 1101 ACTCGGCTTG CAAAGTTATT TGGAATTTTT
AGCACTGGTC AGCATCAGCC 1151 TCGGCGTGCT GAACCTACTG CCCGTCCCTG
TTTTGGACGG CGGGCACCTC 1201 GTGTTTTATA CTGCCGAATG GATACGCGGC
AAACCTTTGG GCGAACGCGT 1251 CCAAAACATC GGTTTGCGCT TCGGGCTCGC
CCTCATGATG CTGATGATGG 1301 CGGTCGCCTT CTTCAACGAC GTTACCCGGC
TGCTCGGTTA G
This corresponds to the amino acid sequence <SEQ ID 1844; ORF
591>:
TABLE-US-02213 m591.pep.. 1 LHTLLAFIFA ILILVSLHEF GHYIVARLCG
VKVVRFSVGF GKPFFTRKRG 51 DTEWCLAPIP LGGYVKMVDT REGEVSEADL
PYAFDKQHPA KRIAIVAAGP 101 LTNLALAVLL YGLSFSFGVT ELRPYVGTVE
PDTIAARAGF QSGDKIQSVN 151 GTPVADWGSA QTEIVLNLEA GKVAVGVQTA
SGAQTVRTID AAGTPEAGKI 201 AKNQGYIGLM PFKITTVAGG VEKGSPAEKA
GLKPGDRLTA ADGKPIASWQ 251 EWANLTRQSP GKKITLNYER AGQTHTADIR
PDTVEQSDHT LIGRVGLRPQ 301 PDRAWDAQIR RSYRPSVVRA FGMGWEKTVS
HSWTTLKFFG KLISGNASVS 351 HISGPLTIAD IAGQSAELGL QSYLEFLALV
SISLGVLNLL PVPVLDGGHL 401 VFYTAEWIRG KPLGERVQNI GLRFGLALMM
LMMAVAFFND VTRLLG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02214 m591/g591 97.3% identity in 446 aa overlap 10 20 30
40 50 60 m591.pep
LHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPFFTRKRGDTEWCLAPIP
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g591
LQTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPFFTRKRGDTEWCLAPIP 10 20
30 40 50 60 70 80 90 100 110 120 m591.pep
LGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLTNLALAVLLYGLSFSFGVT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g591
LGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLTNLALAVLLYGLSFSFGVT 70 80
90 100 110 120 130 140 150 160 170 180 m591.pep
ELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSAQTEIVLNLEAGKVAVGVQTA
|||||||||||||:|||:|||||||||||||: | ||:|||||||||||||||||||||| g591
ELRPYVGTVEPDTVAARTGFQSGDKIQSVNGVSVQDWSSAQTEIVLNLEAGKVAVGVQTA 130
140 150 160 170 180 190 200 210 220 230 240 m591.pep
SGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVAGGVEKGSPAEKAGLKPGDRLTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g591
SGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVAGGVEKGSPAEKAGLKPGDRLTA 190
200 210 220 230 240 250 260 270 280 290 300 m591.pep
ADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHTADIRPDTVEQSDHTLIGRVGLRPQ
||||||||||||||||||||||||||:||||||||||||||||||| ||||||||||||| g591
ADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHTADIRPDTVEQPDHTLIGRVGLRPQ 250
260 270 280 290 300 310 320 330 340 350 360 m591.pep
PDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWTTLKFFGKLISGNASVSHISGPLTIAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g591
PDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWTTLKFFGKLISGNASVSHISGPLTIAD 310
320 330 340 350 360 370 380 390 400 410 420 m591.pep
IAGQSAELGLQSYLEFLALVSISLGVLNLLPVPVLDGGHLVFYTAEWIRGKPLGERVQNI
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| g591
IAGQSAELGLQSYLEFLALVSISLGVLNLLPVPVLDGGHLVFYTVEWIRGKPLGERVQNI 370
380 390 400 410 420 430 440 m591.pep GLRFGLALMMLMMAVAFFNDVTRLLGX
||||||||||||||:|||||||||:|| g591 GLRFGLALMMLMMAAAFFNDVTRLIGX 430
440
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1845>:
TABLE-US-02215 a591.seq 1 TTGCACACCC TTCTAGCTTT TATCTTCGCC
ATCCTGATTT TGGTCAGCCT 51 GCACGAATTC GGACACTACA TCGTCGCCAG
ATTGTGCGGC GTCAAGGTTG 101 TGCGTTTTTC CGTCGGCTTC GGCAAACCGT
TTTTCACCCG AAAGCGCGGC 151 GACACCGAAT GGTGCCTCGC CCCGATTCCG
TTGGGCGGTT ACGTCAAAAT 201 GGTCGACACG CGCGAAGGCG AAGTATCAGA
AGCCGATTTA CCCTACGCTT 251 TTGACAAACA ACACCCCGCC AAGCGCATCG
CCATCGTCGC CGCCGGCCCG 301 CTGACCAACC TCGCACTGGC GGTTTTGCTG
TACGGACTGA GCTTTTCCTT 351 CGGCGTTACC GAACTGCGCC CCTATGTCGG
CACAGTCGAA CCCGACACCA 401 TTGCCGCCCG CGCCGGCTTC CAAAGCGGCG
ACAAAATACA ATCCGTCAAC 451 GGCACACCCG TTGCAGATTG GGGCAGCGCG
CAAACCGAAA TCGTCCTCAA 501 CCTCGAAGCC GGCAAAGTCG CCGTCGGCGT
TCAGACGGCA TCGGGCGCGC 551 AAACCGTCCG CACCATCGAT GCCGCAGGCA
CGCCGGAAGC CGGTAAAATC 601 GCAAAAAACC AAGGCTACAT CGGACTGATG
CCCTTTAAAA TCACAACCGT 651 TGCCGGCGGC GTGGAAAAAG GCAGCCCCGC
CGAAAAAGCA GGCCTGAAAC 701 CGGGCGACAG GCTGACTGCC GCCGACGGCA
AACCCATCGC CTCATGGCAA 751 GAATGGGCAA ACCTGACCCG CCAAAGCCCC
GGCAAAAAAA TCACCCTGAC 801 CTACGAACGC GCCGGACAAA CCCATACCGC
CGACATCCGC CCCGATACTG 851 TCGAACAGCC CGACCACACC CTGATCGGGC
GCGTCGGCCT CCGTCCGCAG 901 CCGGACAGGG CGTGGGACGC GCAAATCCGC
CGCAGCTACC GTCCGTCTGT 951 TGTCCGCGCA TTCGGCATGG GCTGGGAAAA
AACCGTTTCC CACTCGTGGA 1001 CAACCCTCAA ATTTTTCGGC AAACTAATCA
GCGGCAACGC CTCCGTCAGC 1051 CATATTTCCG GTCCGCTGAC CATTGCCGAT
ATTGCCGGAC AGTCCGCCGA 1101 ACTCGGCTTG CAAAGTTATT TGGAATTTTT
GGCACTGGTC AGCATCAGCC 1151 TCGGCGTGCT GAACCTGCTG CCCGTCCCCG
TTTTGGACGG CGGCCACCTC 1201 GTGTTTTATA CTGCCGAATG GATACGCGGC
AAACCTTTGG GCGAACGCGT 1251 CCAAAACATC GGTTTGCGCT TCGGGCTTGC
CCTCATGATG CTGATGATGG 1301 CGGTCGCCTT CTTCAACGAC GTTACCCGGC
TGCTCGGTTA G
This corresponds to the amino acid sequence <SEQ ID 1846; ORF
591.a>:
TABLE-US-02216 a591.pep 1 LHTLLAFIFA ILILVSLHEF GHYIVARLCG
VKVVRFSVGF GKPFFTRKRG 51 DTEWCLAPIP LGGYVKMVDT REGEVSEADL
PYAFDKQHPA KRIAIVAAGP 101 LTNLALAVLL YGLSFSFGVT ELRPYVGTVE
PDTIAARAGF QSGDKIQSVN 151 GTPVADWGSA QTEIVLNLEA GKVAVGVQTA
SGAQTVRTID AAGTPEAGKI 201 AKNQGYIGLM PFKITTVAGG VEKGSPAEKA
GLKPGDRLTA ADGKPIASWQ 251 EWANLTRQSP GKKITLTYER AGQTHTADIR
PDTVEQPDHT LIGRVGLRPQ 301 PDRAWDAQIR RSYRPSVVRA FGMGWEKTVS
HSWTTLKFFG KLISGNASVS 351 HISGPLTIAD IAGQSAELGL QSYLEFLALV
SISLGVLNLL PVPVLDGGHL 401 VFYTAEWIRG KPLGERVQNI GLRFGLALMM
LMMAVAFFND VTRLLG* m591/a591 99.6% identity in 446 aa overlap 10 20
30 40 50 60 m591.pep
LHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPFFTRKRGDTEWCLAPIP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
LHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPFFTRKRGDTEWCLAPIP 10 20
30 40 50 60 70 80 90 100 110 120 m591.pep
LGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLTNLALAVLLYGLSFSFGVT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
LGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLTNLALAVLLYGLSFSFGVT 70 80
90 100 110 120 130 140 150 160 170 180 m591.pep
ELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSAQTEIVLNLEAGKVAVGVQTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
ELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSAQTEIVLNLEAGKVAVGVQTA 130
140 150 160 170 180 190 200 210 220 230 240 m591.pep
SGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVAGGVEKGSPAEKAGLKPGDRLTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
SGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVAGGVEKGSPAEKAGLKPGDRLTA 190
200 210 220 230 240 250 260 270 280 290 300 m591.pep
ADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHTADIRPDTVEQSDHTLIGRVGLRPQ
||||||||||||||||||||||||||:|||||||||||||||||||'||||||||||||| a591
ADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHTADIRPDTVEQPDHTLIGRVGLRPQ 250
260 270 280 290 300 310 320 330 340 350 360 m591.pep
PDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWTTLKFFGKLISGNASVSHISGPLTIAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
PDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWTTLKFFGKLISGNASVSHISGPLTIAD 310
320 330 340 350 360 370 380 390 400 410 420 m591.pep
IAGQSAELGLQSYLEFLALVSISLGVLNLLPVPVLDGGHLVFYTAEWIRGKPLGERVQNI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a591
IAGQSAELGLQSYLEFLALVSISLGVLNLLPVPVLDGGHLVFYTAEWIRGKPLGERVQNI 370
380 390 400 410 420 430 440 m591.pep GLRFGLALMMLMMAVAFFNDVTRLLGX
||||||||||||||||||||||||||| a591 GLRFGLALMMLMMAVAFFNDVTRLLGX 430
440
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1847>:
TABLE-US-02217 g592.seq.. 1 atgattccgg acgtgttcgg tcagattttt
tcgggcgcgt tcaaattcga 51 cgcggcagca ggcggcttac tcggcggtct
gatttcgcaa acgatgatga 101 tgggcatcaa acgcggcctg tattccaacg
aggcgggtat gggttccgcg 151 ccgaacgccg ccgccgccgc cgaagtgaaa
caccctgttt cgcaaggtat 201 gattcaaatg ctgggcgtgt ttgtcgatac
catcatcgtt tgttcttgca 251 ccgccttcat catcttgatt taccaacagc
cttatggcga tttgagcggt 301 gcggcgctga cgcaggcggc gattgtcagc
caagtggggc aatggggcgc 351 gggtttcctc gccgtcatcc tgtttatgtt
tgccttttcc accgttatcg 401 gcaactatgc ctatgccgag tccaacgtcc
aattcatcaa aagccattgg 451 ctgattaccg ccgttttccg tatgctggtt
ttggcgtggg tctatttcgg 501 cgcggttgcc aatgtgcctt tggtctggga
tatggcggat atggcgatgg 551 gcatcatggc gtggatcaac ctcgtcgcca
tcctgctgct ctcgccattg 601 gcgtttatgc tgctgcgcga ttacaccgcc
aagctgaaaa tgggcaaaga 651 ccccgagttc aaactttccg aacatccggg
cctgaaacgc cgcatcaaat 701 ccgatgtttg gtaa
This corresponds to the amino acid sequence <SEQ ID 1848; ORF
592.ng>:
TABLE-US-02218 g592.pep .. 1 MIPDVFGQIF SGAFKFDAAA GGLLGGLISQ
TMMMGIKRGL YSNEAGMGSA 51 PNAAAAAEVK HPVSQGMIQM LGVFVDTIIV
CSCTAFIILI YQQPYGDLSG 101 AALTQAAIVS QVGQWGAGFL AVILFMFAFS
TVIGNYAYAE SNVQFIKSHW 151 LITAVFRMLV LAWVYFGAVA NVPLVWDMAD
MAMGIMAWIN LVAILLLSPL 201 AFMLLRDYTA KLKMGKDPEF KLSEHPGLKR
RIKSDVW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1849>:
TABLE-US-02219 m592.seq .. 1 ATGATTCCGG ACGTGTTCGG TCAGATTTTT
TCGGGCGCGT TCAAATTCGA 51 CGCGGCAGCA GGCGGCTTAC TCGGCGGTCT
GATTTCGCAA ACGATGATGA 101 TGGGCATCAA ACGCGGCCTG TATTCCAACG
AGGCGGGTAT GGGTTCCGCG 151 CCGAACGCCG CCGCCGCCGC CGAAGTGAAA
CACCCTGTTT CGCAAGGTAT 201 GATTCAAATG CTGGGCGTGT TTGTCGATAC
CATCATCGTT TGTTCTTGCA 251 CCGCCTTCAT CATCTTGATT TACCAACAGC
CTTACGGCGA TTTGAGCGGT 301 GCGGCGCTGA CGCAGGCGGC GATTGTCAGC
CAAGTGGGGC AATGGGGCGC 351 GGGCTTCCTC GCCGTCATCC TGTTTATGTT
TGCCTTTTCC ACCGTTATCG 401 GCAACTATGC CTATGCCGAG TCCAACGTCC
AATTCATCAA AAGCCATTGG 451 CTGATTACCG CCGTTTTCCG TATGCTGGTT
TTGGCGTGGG TCTATTTCGG 501 CGCGGTTGCC AATGTGCCTT TGGTCTGGGA
TATGGCGGAT ATGGCGATGG 551 GCATTATGGC GTGGATCAAC CTTGTCGCCA
TCCTGCTGCT CTCGCCCTTG 601 GCGTTTATGC TGCTGCGCGA TTACACCGCC
AAGCTGAAAA TGGGCAAAGA 651 CCCCGAGTTC AAACTTTCCG AACATCCGGG
CCTGAAACGC CGTATCAAAT 701 CCGACGTTTG GTAA
This corresponds to the amino acid sequence <SEQ ID 1850; ORF
592>:
TABLE-US-02220 m592.pep .. 1 MIPDVFGQIF SGAFKFDAAA GGLLGGLISQ
TMMMGIKRGL YSNEAGMGSA 51 PNAAAAAEVK HPVSQGMIQM LGVFVDTIIV
CSCTAFIILI YQQPYGDLSG 101 AALTQAAIVS QVGQWGAGFL AVILFMFAFS
TVIGNYAYAE SNVQFIKSHW 151 LITAVFRMLV LAWVYFGAVA NVPLVWDMAD
MAMGIMAWIN LVAILLLSPL 201 AFMLLRDYTA KLKMGKDPEF KLSEHPGLKR RIKSDVW*
m592/g592 100.0% identity in 237 aa overlap 10 20 30 40 50 60
m592.pep
MIPDVFGQIFSGAFKFDAAAGGLLGGLISQLMMMGIKRGLYSNEAGMGSAPNAAAAAEVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g592
MIPDVFGQIFSGAFKFDAAAGGLLGGLISQLMMMGIKRGLYSNEAGMGSAPNAAAAAEVK 10 20
30 40 50 60 70 80 90 100 110 120 m592.pep
HPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g592
HPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFL 70 80
90 100 110 120 130 140 150 160 170 180 m592.pep
AVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g592
AVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMAD 130
140 150 160 170 180 190 200 210 220 230 m592.pep
MAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g592
MAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX 190 200
210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1851>:
TABLE-US-02221 a592.seq 1 ATGATTCCGG ACGTGTTCGG TCAGATTTTT
TCGGGCGCGT TCAAATTCGA 51 CGCGGCAGCA GGCGGCTTAC TCGGCGGTCT
GATTTCGCAA ACGATGATGA 101 TGGGCATCAA ACGCGGCCTG TATTCCAACG
AGGCGGGTAT GGGTTCCGCG 151 CCGAACGCCG CCGCCGCCGC CGAAGTGAAA
CACCCTGTTT CGCAAGGTAT 201 GATTCAAATG CTGGGCGTGT TTGTCGATAC
CATCATCGTT TGTTCTTGCA 251 CCGCCTTCAT CATCTTGATT TACCAACAGC
CTTACGGCGA TTTGAGCGGT 301 GCGGCGCTGA CGCAGGCGGC GATTGTCAGC
CAAGTGGGGC AATGGGGCGC 351 GGGCTTCCTC GCCGTCATCC TGTTTATGTT
TGCCTTTTCC ACCGTTATCG 401 GCAACTATGC CTATGCCGAG TCCAACGTCC
AATTCATCAA AAGCCATTGG 451 CTGATTACCG CCGTTTTCCG TATGCTGGTT
TTGGCGTGGG TCTATTTCGG 501 CGCGGTTGCC AATGTGCCTT TGGTCTGGGA
TATGGCGGAT ATGGCGATGG 551 GCATTATGGC GTGGATCAAC CTTGTCGCCA
TCCTGCTGCT CTCGCCCTTG 601 GCGTTTATGC TGCTGCGCGA TTACACCGCC
AAGCTGAAAA TGGGCAAAGA 651 CCCCGAGTTC AAACTTTCCG AACATCCGGG
CCTGAAACGC CGTATCAAAT 701 CCGACGTTTG GTAA
This corresponds to the amino acid sequence <SEQ ID 1852; ORF
592.a>:
TABLE-US-02222 a592.pep 1 MIPDVFGQIF SGAFKFDAAA GGLLGGLISQ
TMMMGIKRGL YSNEAGMGSA 51 PNAAAAAEVK HPVSQGMIQM LGVFVDTIIV
CSCTAFIILI YQQPYGDLSG 101 AALTQAAIVS QVGQWGAGFL AVILFMFAFS
TVIGNYAYAE SNVQFIKSHW 151 LITAVFRMLV LAWVYFGAVA NVPLVWDMAD
MAMGIMAWIN LVAILLLSPL 201 AFMLLRDYTA KLKMGKDPEF KLSEHPGLKR RIKSDVW*
m592/a592 100.0% identity in 237 aa overlap 10 20 30 40 50 60
m592.pep
MIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRGLYSNEAGMGSAPNAAAAAEVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a592
MIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKRGLYSNEAGMGSAPNAAAAAEVK 10 20
30 40 50 60 70 80 90 100 110 120 m592.pep
HPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a592
HPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYGDLSGAALTQAAIVSQVGQWGAGFL 70 80
90 100 110 120 130 140 150 160 170 180 m592.pep
AVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a592
AVILFMFAFSTVIGNYAYAESNVQFIKSHWLITAVFRMLVLAWVYFGAVANVPLVWDMAD 130
140 150 160 170 180 190 200 210 220 230 m592.pep
MAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a592
MAMGIMAWINLVAILLLSPLAFMLLRDYTAKLKMGKDPEFKLSEHPGLKRRIKSDVWX 190 200
210 220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1853>:
TABLE-US-02223 g593.seq.. 1 atgcttgaac tgaacggact ctgcaaatgc
ttcggcggca aaacggtcgc 51 cgacaacatc tgcctgactg tcgggcgcgg
caaaatactc gccgtactgg 101 ggcggtcggg ctgcggcaaa tccaccctgc
tgaatatgat tgcgggcatc 151 gtccggccgg acggcggcga aattcggctg
aacggggaaa acattacctg 201 tatgccgccc gaaaaacgcc gtatctcgct
gatgtttcaa gattacgcgc 251 tgtttcccca tatgagtgcg ctggaaaata
cggcattcgg tttgaaaatg 301 caaaaaatgc cgaaagccga agccgaacgc
ctcgccttgt cggcacttgc 351 cgaagtcggg ctggaaaacg aggcgcaccg
caagcctgaa aaactttccg 401 gaggcgagaa gcaacggttg gcactggcgc
gcgctttggt tgtccgccct 451 tccctgctgt tgctggatga atcgttttcc
agtttggaca cgcatttgcg 501 cgaccggctg cgccgtatga ccgccgaacg
catccgcaag ggcggcatcc 551 ctgccgtttt ggtaacgcat tcgcccgaag
aggcctgcac ggcggcggac 601 gaaatcgccg tcatgcacga ggggaaaatc
cttcaatgcg gtacgcccga 651 aaccttgatt caaacgcctg ccggcgtgca
ggtcgcccgt ctgatggggc 701 tgcccaatac cgacgatgac cgccatattc
cgcaaaatgc cgtgtgcttg 751 gacaatcatg gaacggaatg ccgtctgctg
tccctcgtcc gcctgcccga 801 ctcgctccgg ctttccgccg tccatcccga
acacggcgag ctgaccttaa 851 acctgactgt cggacaacat acggacggta
tttccggaaa cggtacggtc 901 cgcatccgcg tcgatgaagg gcgtatcgtc
cgtttccgat ga
This corresponds to the amino acid sequence <SEQ ID 1854; ORF
593.ng>:
TABLE-US-02224 g593.pep.. 1 MLELNGLCKC FGGKTVADNI CLTVGRGKIL
AVLGRSGCGK STLLNMIAGI 51 VRPDGGEIRL NGENITCMPP EKRRISLMFQ
DYALFPHMSA LENTAFGLKM 101 QKMPKAEAER LALSALAEVG LENEAHRKPE
KLSGGEKQRL ALARALVVRP 151 SLLLLDESFS SLDTHLRDRL RRMTAERIRK
GGIPAVLVTH SPEEACTAAD 201 EIAVMHEGKI LQCGTPETLI QTPAGVQVAR
LMGLPNTDDD RHIPQNAVCL 251 DNHGTECRLL SLVRLPDSLR LSAVHPEHGE
LTLNLTVGQH TDGISGNGTV 301 RIRVDEGRIV RFR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1855>:
TABLE-US-02225 m593.seq 1 ATGCTTGAAC TGAACGGACT CTGCAAACGC
TTCGGCAATA AAACCGTCGC 51 CGACAACATC TGCCTGACTG TCGGGCGCGG
CAAAATACTC GCCGTTTTGG 101 GGCGGTCGGG CTGCGGAAAA TCCACCCTGC
TGAATATAAT TGCGGGGATT 151 GTCCGGCCGG ACGGCGGGGA AATATGGCTG
AACGGAGAAA ACATTACCCG 201 TATGCCGCCC GAAAAACGCC GTATCTCGCT
GATGTTTCAA GATTACGCGC 251 TGTTTCCCCA TATGAGTGCG CTGGAAAATG
CGGCATTCGG TTTGAAAATG 301 CAAAAAATGC CGAAAGCCGA AGCCGAACGC
CTCGCCATGG CGGCACTTGC 351 CGAAGTCGGA CTGGAAAACG AGGCGCACCG
CAAGCCTGAA AAACTTTCCG 401 GAGGCGAGAA GCAACGGCTG GCGTTGGCGC
GCGCTTTGGT TGTCCGCCCT 451 TCCCTGCTGC TGTTGGACGA ATCGTTTTCC
AGTTTGGACA CGCATTTGCG 501 CGGCACGCTG CGCCGTATGA CTGCCGAACG
TATCCGAAAC GGCGGCATCC 551 CTGCCGTTTT GGTAACGCAT TCGCCCGAAG
AAGCCTGTAC GACGGCAGAC 601 GAAATCGCCG TGATGCATAA AGGGAGGATT
CTACAATACG GTACGCCCGA 651 AACATTGGTC AAAACACCAT CCTGCGTGCA
GGTCGCCCGA CTGATGGGTT 701 TGCCCAATAC CGACGATAAC CGCCATATTC
CGCAACATGC GGTGCGTTTC 751 GACCAAGACG GCATGGAGTG CCGCGTATTA
TCCCGTACCT GTTTGCCCGA 801 ATCGTTCAGC CTGTCCGTCC TCCATCCGGA
ACACGGCATC CTGTGGCTGA 851 ACCTCGATAT GCGGCACGCC GGGGCGGTAT
CGGGCAAGGA TACGGTACGC 901 ATCCATATCG AAGAACGGGA AATCGTCCGC
TTCCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1856; ORF
593>:
TABLE-US-02226 m593.pep .. 1 MLELNGLCKR FGNKTVADNI CLTVGRGKIL
AVLGRSGCGK STLLNIIAGI 51 VRPDGGEIWL NGENITRMPP EKRRISLMFQ
DYALFPHMSA LENAAFGLKM 101 QKMPKAEAER LAMAALAEVG LENEAHRKPE
KLSGGEKQRL ALARALVVRP 151 SLLLLDESFS SLDTHLRGTL RRMTAERIRN
GGIPAVLVTH SPEEACTTAD 201 EIAVMHKGRI LQYGTPETLV KTPSCVQVAR
LMGLPNTDDN RHIPQHAVRF 251 DQDGMECRVL SRTCLPESFS LSVLHPEHGI
LWLNLDMRHA GAVSGKDTVR 301 IHIEEREIVR FR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02227 m593/g593 83.4% identity in 313 aa overlap 10 20 30
40 50 60 m593.pep
MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLLNIIAGIVRPDGGEIWL
||||||||| ||:||||||||||||||||||||||||||||||||:|||||||||||| | g593
MLELNGLCKCFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLLNMIAGIVRPDGGEIRL 10 20
30 40 50 60 70 80 90 100 110 120 m593.pep
NGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEAERLAMAALAEVG ||||||
||||||||||||||||||||||||||:||||||||||||||||||::|||||| g593
NGENITCMPPEKRRISLMFQDYALFPHMSALENTAFGLKMQKMPKAEAERLALSALAEVG 70 80
90 100 110 120 130 140 150 160 170 180 m593.pep
LENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRGTLRRMTAERIRN
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||: g593
LENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRDRLRRMTAERIRK 130
140 150 160 170 180 190 200 210 220 230 240 m593.pep
GGIPAVLVTHSPEEACTTADEIAVMHKGRILQYGTPETLVKTPSCVQVARLMGLPNTDDN
|||||||||||||||||:||||||||:|:||| ||||||::||: ||||||||||||||: g593
GGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPETLIQTPAGVQVARLMGLPNTDDD 190
200 210 220 230 240 250 260 270 280 290 299 m593.pep
RHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHPEHGILWLNLDM-RHAGAVSGKDTV
|||||:|| :|: | |||:|| : ||:|: ||::||||| | ||| : :|: ::||: || g593
RHIPQNAVCLDNHGTECRLLSLVRLPDSLRLSAVHPEHGELTLNLTVGQHTDGISGNGTV 250
260 270 280 290 300 300 310 m593.pep RIHIEEREIVRFRX ||:::| :||||||
g593 RIRVDEGRIVRFRX 310
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1857>:
TABLE-US-02228 a593.seq 1 ATGCTTGAAC TGAACGGACT CTGCAAACGC
TTCGGCGGCA AAACGGTTGC 51 CGACGATATC TGCCTGACTG TCGGGCGCGG
CAAAATACTC GCCGTTTTGG 101 GGCGGTCGGG CTGCGGCAAA TCCACCCTGC
TGAATATGAT TGCGGGCATC 151 GTCCGGCCGG ACGGCGGGGA AATATGGCTG
AATGGGGAAA ACATTACCCG 201 TATGCCGCCC GAAAAACGCC GTATTTCGCT
GATGTTTCAA GATTACGCGC 251 TGTTTCCCCA TATGAGTGCA CTGGAAAATG
CGGCATTCGG TTTGAAAATG 301 CAAAAAATGC CGAAAGCCGA AGCCGAAAGC
CTCGCCATGG CGGCACTTGC 351 CGAAGTCGGA CTGGAAAACG AGGCGCACCG
CAAGCCTGAN AAACTTTCCG 401 GAGGCGAAAA GCAACGGTTG GCACTGGCGC
GCGCTTTGGT TGTCCGCCCT 451 TCCCTGCTGC TGTTGGACGA ATCGTTTTCC
AGTTTGGACA CGCATTTGCG 501 CGACCGGCTG CGCCGCATGA CTGCCGAACG
TATCCGCAAG GGCGGCATCC 551 CTGCCGTTTT GGTAACGCAT TCGCCCGAAG
AGGCCTGCAC GGCGGCAGAC 601 GAAATCGCCG TCATGCACGA GGGGAAAATC
CTTCAATGCG GTACGCCCGA 651 AACCTTGGTT CAAACGCCTG CCGGCGTGCA
GGTCGCCCAT CTGATGGGGC 701 TGCCCAATAC CGACGATGAC CGCCATATTC
CGCAACATGC GGTGCGTTTC 751 GACCAAGACG GCATGGAGTG CCGCGTATTA
TCCCGTACCT GTTTGCCCGA 801 ATCGTTCAGC CTGTCCGTCC TCCATCCGGA
ACACGGCATC CTGTGGCTGA 851 ACCTCGATAT GCCGCACGCC GGTGAAATAT
CGGGAAACGA TACGGTACGC 901 ATCCATATCG AAGACAGGGA AATCGTCCGC
TTCCGCTGA
This corresponds to the amino acid sequence <SEQ ID 1858; ORF
593.a>:
TABLE-US-02229 a593.pep 1 MLELNGLCKR FGGKTVADDI CLTVGRGKIL
AVLGRSGCGK STLLNMIAGI 51 VRPDGGEIWL NGENITRMPP EKRRISLMFQ
DYALFPHMSA LENAAFGLKM 101 QKMPKAEAES LAMAALAEVG LENEAHRKPX
KLSGGEKQRL ALARALVVRP 151 SLLLLDESFS SLDTHLRDRL RRMTAERIRK
GGIPAVLVTH SPEEACTAAD 201 EIAVMHEGKI LQCGTPETLV QTPAGVQVAH
LMGLPNTDDD RHIPQHAVRF 251 DQDGMECRVL SRTCLPESFS LSVLHPEHGI
LWLNLDMPHA GEISGNDTVR 301 IHIEDREIVR FR* m593/a593 92.9% identity
in 312 aa overlap 10 20 30 40 50 60 m593.pep
MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLLNIIAGIVRPDGGEIWL
||||||||||||:|||||:||||||||||||||||||||||||||:|||||||||||||| a593
MLELNGLCKRFGGKTVADDICLTVGRGKILAVLGRSGCGKSTLLNMIAGIVRPDGGEIWL 10 20
30 40 50 60 70 80 90 100 110 120 m593.pep
NGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEAERLAMAALAEVG
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| a593
NGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEAESLAMAALAEVG 70 80
90 100 110 120 130 140 150 160 170 180 m593.pep
LENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRGTLRRMTAERIRN
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||: a593
LENEAHRKPXKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRDRLRRMTAERIRK 130
140 150 160 170 180 190 200 210 220 230 240 m593.pep
GGIPAVLVTHSPEEACTTADEIAVMHKGRILQYGTPETLVKTPSCVQVARLMGLPNTDDN
|||||||||||||||||:||||||||:|:||| |||||||:||: ||||:|||||||||: a593
GGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPETLVQTPAGVQVAHLMGLPNTDDD 190
200 210 220 230 240 250 260 270 280 290 300 m593.pep
RHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHPEHGILWLNLDMRHAGAVSGKDTVR
||||||||||||||||||||||||||||||||||||||||||||||| ||| :||:|||| a593
RHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHPEHGILWLNLDMPHAGEISGNDTVR 250
260 270 280 290 300 310 m593.pep IHIEEREIVRFRX ||||:|||||||| a593
IHIEDREIVRFRX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1859>:
TABLE-US-02230 g594.seq.. 1 atgggtgcag ataccgatgg cgacaaggat
gttcggctta atcgaacggg 51 tctcgttttt agcatactcc ggctgctgtt
ccgcatcgga attgggatcg 101 gtaagttcgc cgttcaggcc tttcaggtct
ttaagctgct gatctgtacg 151 gttgagcacc caaatcggtt tgccttgcca
ctcggcggtc agcagctgac 201 ccgcttcgat tttactgaca tccacctcga
cggcagcacc ggaggccttg 251 gctttttccg aagggaaaaa actggccaca
aacggcgttg ccacacccaa 301 tgctgccact ccgcccgcgc cgcaggtcgc
aagtgtcagg aaacggcggc 351 ggccgttgtt gatttcttga ttatccatta
ttcagtcgtc ctaatatttt 401 gggaatgccg agccattaaa cattgcaatt
ttacccagtt tgcagtgata 451 ctcaaagcat tatttaaaat aaggtaa
This corresponds to the amino acid sequence <SEQ ID 1860; ORF
594.ng>:
TABLE-US-02231 g594.pep 1 MGADTDGDKD VRLNRTGLVF SILRLLFRIG
IGIGKFAVQA FQVFKLLICT 51 VEHPNRFALP LGGQQLTRFD FTDIHLDGST
GGLGFFRREK TGHKRRCHTQ 101 CCHSARAAGR KCQETAAAVV DFLIIHYSVV
LIFWECRAIK HCNFTQFAVI 151 LKALFKIR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1861>:
TABLE-US-02232 m594.seq 1 ATGGGTGCAG ATACCGATGG CGACAAGGAT
GTTCGGCTTA ATCGAACGGG 51 TCTCGTTTTT AGCATACTCC GGCTGCTGTT
CCGCATCGGA ATTGGGATCG 101 GTAAGTTCGC CGTTCAGGCC TTTCAGGTCT
TTAAGCTGCT GATCTGTACG 151 GTTGAGCACC CAAATCGGTT TGCCTTGCCA
CTCGGCGGTC AGCAGCTGAC 201 CCGCTTCGAT TTTACTGACA TCCACCTCGA
CGGCAGCACC GGCGGCCTTG 251 GCTTTTTCCG AAGGGAAAAA ACTGGCCACA
AACGGCGTTG CCACACCCAA 301 TGCTGCCACT CCGCCCGCGC CGCAGGTCGC
GAGTGTCAGG AAACGGCGGC 351 GGCCGTTGTT GATTTCTTGA TTATCCATTA
TTCAGTCGTC CTAATATTTT 401 GGGAATACCG AGCCATTAAA CGTTGCAATT
TTACCCAGTT TGCAGTGATA 451 CTCAAAGCAT TATTTAAAAT AAGGTAA
This corresponds to the amino acid sequence <SEQ ID 1862; ORF
594>:
TABLE-US-02233 m594.pep 1 MGADTDGDKD VRLNRTGLVF SILRLLFRIG
IGIGKFAVQA FQVFKLLICT 51 VEHPNRFALP LGGQQLTRFD FTDIHLDGST
GGLGFFRREK TGHKRRCHTQ 101 CCHSARAAGR ECQETAAAVV DFLIIHYSVV
LIFWEYRAIK RCNFTQFAVI 151 LKALFKIR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02234 m594/g594 98.1% identity in 158 aa overlap 10 20 30
40 50 60 m594.pep
MGADTDGDKDVRLNRTGLVFSILRLLFRIGIGIGKFAVQAFQVFKLLICTVEHPNRFALP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g594
MGADTDGDKDVRLNRTGLVFSILRLLFRIGIGIGKFAVQAFQVFKLLICTVEHPNRFALP 10 20
30 40 50 60 70 80 90 100 110 120 m594.pep
LGGQQLTRFDFTDIHLDGSTGGLGFFRREKTGHKRRCHTQCCHSARAAGRECQETAAAVV
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g594
LGGQQLTRFDFTDIHLDGSTGGLGFFRREKTGHKRRCHTQCCHSARAAGRKCQETAAAVV 70 80
90 100 110 120 130 140 150 159 m594.pep
DFLIIHYSVVLIFWEYRAIKRCNFTQFAVILKALFKIRX |||||||||||||||
||||:|||||||||||||||||| g594
DFLIIHYSVVLIFWECRAIKHCNFTQFAVILKALFKIRX 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1863>:
TABLE-US-02235 a594.seq 1 ATGGGTGCAG ATACCGATGG CGACAAGGAT
GTTCGGCTTA ATCGAACGGG 51 TCTCGTTTTT AGCATACTCC GGCTGCTGTT
CCGCATCGGA ATTGGGATCG 101 GTAAGTTCGC CGTTCAGGCC TTTCAGGTCT
TTAAGCTGCT GATCTGTACG 151 GTTGAGCACC CAAATCGGTT TGCCTTGCCA
CTCGGCGGTC AGCAACTGAC 201 CCGCTTCGAT TTTACTGACA TCCACCTCGA
CGGCAGCACC GGCGGCCTTG 251 GCTTTTTCCG AAGGGAAAAA ACTGGCCACA
AACGGCGTTG CCACACCCAA 301 TGCTGCCACT CCGCCCGCGC CGCAGGTCGC
GAGTGTCAGG AAACGGCGGC 351 GGCCGTTGTT GATTTCTTGA TTATCCATTA
TTCAGTCGTC CTAATATTTT 401 GGGAATACCG AGCCATTAAA CGTTGCAATT
TTACCCAGTT TGCAGTGATA 451 CTCAAAGCAT TATTTAAAAT AAGGTAA
This corresponds to the amino acid sequence <SEQ ID 1864; ORF
594.a>:
TABLE-US-02236 a594.pep 1 MGADTDGDKD VRLNRTGLVF SILRLLFRIG
IGIGKFAVQA FQVFKLLICT 51 VEHPNRFALP LGGQQLTRFD FTDIHLDGST
GGLGFFRREK TGHKRRCHTQ 101 CCHSARAAGR ECQETAAAVV DFLIIHYSVV
LIFWEYRAIK RCNFTQFAVI 151 LKALFKIR* m594/a594 100.0% identity in
158 aa overlap 10 20 30 40 50 60 m594.pep
MGADTDGDKDVRLNRTGLVFSILRLLFRIGIGIGKFAVQAFQVFKLLICTVEHPNRFALP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a594
MGADTDGDKDVRLNRTGLVFSILRLLFRIGIGIGKFAVQAFQVFKLLICTVEHPNRFALP 10 20
30 40 50 60 70 80 90 100 110 120 m594.pep
LGGQQLTRFDFTDIHLDGSTGGLGFFRREKTGHKRRCHTQCCHSARAAGRECQETAAAVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a594
LGGQQLTRFDFTDIHLDGSTGGLGFFRREKTGHKRRCHTQCCHSARAAGRECQETAAAVV 70 80
90 100 110 120 130 140 150 159 m594.pep
DFLIIHYSVVLIFWEYRAIKRCNFTQFAVILKALFKIRX
||||||||||||||||||||||||||||||||||||||| a594
DFLIIHYSVVLIFWEYRAIKRCNFTQFAVILKALFKIRX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1865>:
TABLE-US-02237 g595.seq.. 1 atgagaaaat tcaatttgac cgcattgtcc
gtgatgcttg ccttgggttt 51 gaccgcgtgc cagccgccgg aggcggagaa
agccgcgccg gccgcgtccg 101 gtgagaccca atccgccaac gaaggcggtt
cggtcggtat cgccgtcaac 151 gacaatgcct gcgaaccgat gaatctgacc
gtgccgagcg gacaggttgt 201 gttcaatatt aaaaacaaca gcggccgcaa
gctcgaatgg gaaatcctga 251 agggcgtgat ggtggtggac gaacgcgaaa
atatcgcccc ggggctttcc 301 gacaaaatga accgtaacct gctgccgggc
gaatacgaaa tgacctgcgg 351 ccttttgacc aatccgcgcg gcaagctggt
ggtagccgac agcggcttta 401 aagacaccgc caacgaagcg gatttggaaa
aactgcccca accgctcgcc 451 gactataaag cctacgttca aggcgaggtt
aaagagctgg cggcgaaaac 501 caaaaccttt accgaagccg tcaaagcagg
cgacattgaa aaggcgaaat 551 ccctgtttgc cgccacccgc gtccattacg
aacgcatcga accgattgcc 601 gagcttttca gcgaactcga ccccgtcatc
gatgcgtgtg aagacgactt 651 caaagacggt gcgaaagatg ccgggtttac
cggcttccac cgtatcgaac 701 acgccctttg ggtggaaaaa gacgtatccg
gcgtgaagga aaccgcggcc 751 aaactgatga ccgatgtcga agccctgcaa
aaagaaatcg acgcattggc 801 gttccctccg ggcaaagtgg tcggcggcgc
gtccgaactg attgaagaag 851 cggcgggcag taaaatcagc ggcgaagaag
accgttacag ccacaccgat 901 ttgagcgact tccaagctaa tgcggacgga
tctaaaaaaa tcgtcgattt 951 gttccgtccg ttgattgagg ccaaaaacaa
agccttgttg gaaaaaaccg 1001 ataccaactt caaacaggtc aacgaaattc
tggcgaaata ccgcaccaaa 1051 gacggttttg aaacctacga caagctgagc
gaagccgacc gcaaagcatt 1101 acaggctcct attaacgcgc ttgccgaaga
ccttgcccaa cttcgcggca 1151 tactcggctt gaaataa
This corresponds to the amino acid sequence <SEQ ID 1866; ORF
595.ng>:
TABLE-US-02238 g595.pep .. 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGETQSAN EGGSVGIAVN 51 DNACEPMNLT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMNRNLLPG EYEMTCGLLT NPRGKLVVAD
SGFKDTANEA DLEKLPQPLA 151 DYKAYVQGEV KELAAKTKTF TEAVKAGDIE
KAKSLFAATR VHYERIEPIA 201 ELFSELDPVI DACEDDFKDG AKDAGFTGFH
RIEHALWVEK DVSGVKETAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEAAGSKIS GEEDRYSHTD 301 LSDFQANADG SKKIVDLFRP LIEAKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLS EADRKALQAP INALAEDLAQ
LRGILGLK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1867>:
TABLE-US-02239 m595.seq 1 ATGAGAAAAT TCAATTTGAC CGCATTGTCC
GTGATGCTTG CCTTAGGTTT 51 GACCGCGTGC CAGCCGCCGG AGGCGGAGAA
AGCTGCGCCG GCAGCGTCCG 101 GTGAGGCGCA AACCGCCAAC GAGGGCGGTT
CGGTCAGTAT CGCCGTCAAC 151 GACAATGCCT GCGAACCGAT GGAACTGACC
GTGCCGAGCG GACAGGTTGT 201 GTTCAATATT AAAAACAACA GCGGCCGCAA
GCTCGAATGG GAAATCCTGA 251 AAGGCGTGAT GGTGGTGGAC GAGCGCGAAA
ACATCGCCCC CGGACTTTCC 301 GATAAAATGA CCGTCACCCT GTTGCCGGGC
GAATACGAAA TGACTTGCGG 351 TCTTTTGACC AATCCGCGCG GCAAGCTGGT
GGTAACCGAC AGCGGCTTTA 401 AAGACACCGC CAACGAAGCG GATTTGGAAA
AACTGTCCCA ACCGCTCGCC 451 GACTATAAAG CCTACGTTCA AGGCGAGGTT
AAAGAGCTGG TGGCGAAAAC 501 CAAAACTTTT ACCGAAGCCG TCAAAGCAGG
CGACATTGAA AAGGCGAAAT 551 CCCTGTTTGC CGACACCCGC GTCCATTACG
AACGCATCGA ACCGATTGCC 601 GAGCTTTTCA GCGAACTCGA CCCCGTCATC
GATGCGCGTG AAGACGACTT 651 CAAAGACGGC GCGAAAGATG CCGGATTTAC
CGGCTTTCAC CGTATCGAAT 701 ACGCCCTTTG GGTGGAAAAA GACGTGTCCG
GCGTGAAGGA AATTGCAGCG 751 AAACTGATGA CCGATGTCGA AGCCCTGCAA
AAAGAAATCG ACGCATTGGC 801 GTTTCCTCCG GGCAAGGTGG TCGGCGGCGC
GTCCGAACTG ATTGAAGAAG 851 TGGCGGGCAG TAAAATCAGC GGCGAAGAAG
ACCGGTACAG CCACACCGAT 901 TTGAGCGACT TCCAAGCCAA TGTGGACGGA
TCTAAAAAAA TCGTCGATTT 951 GTTCCGTCCG CTGATCGAGG CCAAAAACAA
AGCCTTGTTG GAAAAAACCG 1001 ATACCAACTT CAAACAGGTC AACGAAATTC
TGGCGAAATA CCGGACTAAA 1051 GACGGTTTTG AAACCTACGA CAAGCTGGGC
GAAGCCGACC GCAAAGCGTT 1101 ACAGGCCTCT ATTAACGCGC TTGCCGAAGA
CCTTGCCCAA CTTCGCGGCA 1151 TACTCGGCTT GAAATAA
This corresponds to the amino acid sequence <SEQ ID 1868; ORF
595>:
TABLE-US-02240 m595.pep 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGEAQTAN EGGSVSIAVN 51 DNACEPMELT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMTVTLLPG EYEMTCGLLT NPRGKLVVTD
SGFKDTANEA DLEKLSQPLA 151 DYKAYVQGEV KELVAKTKTF TEAVKAGDIE
KAKSLFADTR VHYERIEPIA 201 ELFSELDPVI DAREDDFKDG AKDAGFTGFH
RIEYALWVEK DVSGVKEIAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEVAGSKIS GEEDRYSHTD 301 LSDFQANVDG SKKIVDLFRP LIEAKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLG EADRKALQAS INALAEDLAQ
LRGILGLK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02241 m595/g595 95.4% identity in 388 aa overlap 10 20 30
40 50 60 m595.pep
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT
|||||||||||||||||||||||||||||||||||:|:|||||||:|||||||||||:|| g595
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGSVGIAVNDNACEPMNLT 10 20
30 40 50 60 70 80 90 100 110 120 m595.pep
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT
|||||||||||||||||||||||||||||||||||||||||||: :|||||||||||||| g595
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMNRNLLPGEYEMTCGLLT 70 80
90 100 110 120 130 140 150 160 170 180 m595.pep
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE
||||||||:|||||||||||||||| |||||||||||||||||:|||||||||||||||| g595
NPRGKLVVADSGFKDTANEADLEKLPQPLADYKAYVQGEVKELAAKTKTFTEAVKAGDIE 130
140 150 160 170 180 190 200 210 220 230 240 m595.pep
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK
||||||| |||||||||||||||||||||||| ||||||||||||||||||||:|||||| g595
KAKSLFAATRVHYERIEPIAELFSELDPVIDACEDDFKDGAKDAGFTGFHRIEHALWVEK 190
200 210 220 230 240 250 260 270 280 290 300 m595.pep
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD
||||||| |||||||||||||||||||||||||||||||||||:|||||||||||||||| g595
DVSGVKETAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEAAGSKISGEEDRYSHTD 250
260 270 280 290 300 310 320 330 340 350 360 m595.pep
LSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||: g595
LSDFQANADGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLS 310
320 330 340 350 360 370 380 389 m595.pep
EADRKALQASINALAEDLAQLRGILGLKX ||||||||| ||||||||||||||||||| g595
EADRKALQAPINALAEDLAQLRGILGLKX 370 380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1869>:
TABLE-US-02242 a595.seq 1 ATGAGAAAAT TCAATTTGAC CGCATTGTCC
GTGATGCTTG CCTTAGGTTT 51 GACCGCGTGC CAGCCGCCGG AGGCGGAGAA
AGCTGCGCCG GCAGCGTCCG 101 GTGAGGCGCA AACCGCCAAC GAGGGCGGTT
CGGTCAGTAT CGCCGTCAAC 151 GACAATGCCT GCGAACCGAT GGAACTGACC
GTGCCGAGCG GACAGGTTGT 201 GTTCAATATT AAAAACAACA GCGGCCGCAA
GCTCGAATGG GAAATCCTGA 251 AAGGCGTGAT GGTGGTGGAC GAGCGCGAAA
ACATCGCCCC CGGACTTTCC 301 GATAAAATGA CCGTCACCCT GTTGCCGGGC
GAATACGAAA TGACTTGCGG 351 TCTTTTGACC AATCCGCGCG GCAAGCTGGT
GGTAACCGAC AGCGGCTTTA 401 AAGACACCGC CAACGAAGCG GATTTGGAAA
AACTGTCCCA ACCGCTCGCC 451 GACTATAAAG CCTATGTTCA AGGCGAAGTC
AAAGAGCTGG TGGCGAAAAC 501 CAAAACCTTT ACCGAAGCCG TCAAAGCAGG
CGACATTGAA AAGGCGAAAT 551 CCCTGTTTGC CGACACCCGC GTCCATTACG
AACGCATCGA ACCGATTGCC 601 GAGCTTTTCA GCGAACTCGA CCCCGTCATC
GATGCGCGTG AAGACGACTT 651 CAAAGACGGC GCGAAAGATG CCGGATTTAC
CGGCTTCCAC CGTATCGAAT 701 ACGCCCTTTG GGTGGAAAAA GACGTGTCCG
GCGTGAAGGA AATTGCAGCG 751 AAACTGATGA CCGATGTCGA AGCCCTGCAA
AAAGAAATCG ACGCATTGGC 801 GTTTCCTCCG GGCAAGGTGG TCGGCGGCGC
GTCCGAACTG ATTGAAGAAG 851 TGGCGGGCAG TAAAATCAGC GGCGAAGAAG
ACCGGTACAG CCACACCGAT 901 TTGAGCGACT TCCAAGCCAA TGTGGACGGA
TCGAAAAAAA TCGTCGATTT 951 GTTCCGTCCG TTGATCGAGA CCAAAAACAA
AGCCTTGTTG GAAAAAACCG 1001 ATACCAACTT CAAACAGGTC AACGAAATTC
TGGCGAAATA CCGGACTAAA 1051 GACGGTTTTG AAACCTACGA CAAGCTGGGC
GAAGCCGACC GCAAAGCGTT 1101 ACAGGCCTCT ATTAACGCGC TTGCCGAAGA
CCTTGCCCAA CTTCGCGGCA 1151 TACTCGGCTT GAAATAA
This corresponds to the amino acid sequence <SEQ ID 1870; ORF
595.a>:
TABLE-US-02243 a595.pep 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGEAQTAN EGGSVSIAVN 51 DNACEPMELT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMTVTLLPG EYEMTCGLLT NPRGKLVVTD
SGFKDTANEA DLEKLSQPLA 151 DYKAYVQGEV KELVAKTKTF TEAVKAGDIE
KAKSLFADTR VHYERIEPIA 201 ELFSELDPVI DAREDDFKDG AKDAGFTGFH
RIEYALWVEK DVSGVKEIAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEVAGSKIS GEEDRYSHTD 301 LSDFQANVDG SKKIVDLFRP LIETKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLG EADRKALQAS INALAEDLAQ
LRGILGLK* m595/a595 99.7% identity in 388 aa overlap 10 20 30 40 50
60 m595.pep
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a595
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT 10 20
30 40 50 60 70 80 90 100 110 120 m595.pep
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a595
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT 70 80
90 100 110 120 130 140 150 160 170 180 m595.pep
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a595
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE 130
140 150 160 170 180 190 200 210 220 230 240 m595.pep
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a595
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK 190
200 210 220 230 240 250 260 270 280 290 300 m595.pep
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a595
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD 250
260 270 280 290 300 310 320 330 340 350 360 m595.pep
LSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| a595
LSDFQANVDGSKKIVDLFRPLIETKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG 310
320 330 340 350 360 370 380 389 m595.pep
EADRKALQASINALAEDLAQLRGILGLKX ||||||||||||||||||||||||||||| a595
EADRKALQASINALAEDLAQLRGILGLKX 370 380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1871>:
TABLE-US-02244 g596.seq. (partial). 1 ..atgctgctct tggacgagcc
gaccaaccac ttggatgcgg aatcggtgga 51 atggctggag caattcctcg
tgcgcttccc cggcacagtg gtcgcggtaa 101 cgcacgaccg ctacttcctc
gacaacgccg ccgaatggat tttggaactc 151 gaccgcggac acggcattcc
gtggaaaggc aattactcgt cttggctgga 201 gcagaaagaa aaacgcttgg
aaaacgaggc gaaatccgaa gccgcgcgcg 251 tgaaggcgat gaagcaggaa
ttggaatggg tgcgccaaaa tgccaaaggc 301 cgccaagcca agcccaaagc
gcgtttggcg cgttttgaag aaatgagcaa 351 ctacgaatac caaaaacgca
acgaaactca ggaaatcttt atccctgttg 401 ccgagcgttt gggtaacgaa
gtgattgaat ttgtgaatgt ttccaaatcg 451 ttcggcgata aagtgctgat
tgacggtttg agcttcaaag tgccggcggg 501 cgcgattgtc ggcatcatcg
gcccgaacgg cgcgggtaaa tcgacgctgt 551 tcaaaatgat tgcgggcaaa
gagcagcccg attcgggcga agtgaaaatc 601 gggcaaaccg tgaaaatgag
cttgattgac caaagccgcg aaggtttgca 651 aaacgacaaa accgtgttcg
acaacattgc cgaaggtcgc gatattttgc 701 aggtcggaca gtttgaaatc
cccgcccgcc aatatttggg acgcttcaac 751 tttaaaggca gcgaccaaag
caaaatcgca aggcagcttt ccggcggcga 801 acgcggccgt ctgcacttgg
caaaaacctt gttgggcggc ggcaatgtgt 851 tgctgctgga cgaaccgtcc
aacgatctcg acgtggaaac cctgcgcgcg 901 ttggaagacg cattgttgga
atttgccggc agcgtgatgg tgatttcgca 951 cgaccgctgg tttctcgacc
gcatagccac gcatatcttg gcgtgtgaag 1001 gcgactccaa atgggtgttc
ttcgacggca actatcaaga atacgaagcc 1051 gacaagaaac gccgactcgg
caaagaaggc gcgaaaccga aacgcatcaa 1101 atacaaaccg gtaacgcgtt aa
This corresponds to the amino acid sequence <SEQ ID 1872; ORF
596.ng>:
TABLE-US-02245 g596.pep (partial). 1 ..MLLLDEPTNH LDAESVEWLE
QFLVRFPGTV VAVTHDRYFL DNAAEWILEL 51 DRGHGIPWKG NYSSWLEQKE
KRLENEAKSE AARVKAMKQE LEWVRQNAKG 101 RQAKPKARLA RFEEMSNYEY
QKRNETQEIF IPVAERLGNE VIEFVNVSKS 151 FGDKVLIDGL SFKVPAGAIV
GIIGPNGAGK STLFKMIAGK EQPDSGEVKI 201 GQTVKMSLID QSREGLQNDK
TVFDNIAEGR DILQVGQFEI PARQYLGRFN 251 FKGSDQSKIA RQLSGGERGR
LHLAKTLLGG GNVLLLDEPS NDLDVETLRA 301 LEDALLEFAG SVMVISHDRW
FLDRIATHIL ACEGDSKWVF FDGNYQEYEA 351 DKKRRLGKEG AKPKRIKYKP VTR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1873>:
TABLE-US-02246 m596.seq.. 1 ATGTCCCAAC AATACGTCTA TTCTATGCTG
CGCGTGAGCA AGGTTGTGCC 51 GCCGCAGAAA ACCATCATTA AAGATATTTC
CCTTTCTTTC TTCCCCGGCG 101 CGAAAATCGG CCTGCTCGGT TTGAACGGCG
CGGGCAAGTC CACCGTGCTG 151 CGGATTATGG CGGGCGTGGA TAAGGAATTT
GAGGGCGAAG CCGTGCCGAT 201 GGGCGGCATC AAAATCGGCT ACCTGCCGCA
AGAGCCTGAG CTTGATCCGG 251 AAAAAACCGT GCGCGAGGAA GTGGAAAGCG
GTTTGGGCGA AGTGGCTGCC 301 GCGCAGAAAC GTTTGGAAGA AGTGTATGCC
GAGTACGCCA ATCCTGATGC 351 GGATTTTGAC GCGTTGGCAG AAGAGCAGGG
CCGCTTGGAA GCGATTATTG 401 CGGCAGGTTC GTCCACGGGC GGCGGTGCGG
AACACGAATT GGAAATCGCC 451 GCCGACGCGC TGCGCCTGCC GGAATGGGAT
GCCAAAATCG ATAATTTGTC 501 CGGCGGTGAA AAACGCCGCG TTGCCTTGTG
CAAACTCTTG TTGAGCAAGC 551 CCGATATGCT TTTGCTGGAC GAGCCGACCA
ACCACTTGGA TGCGGAATCG 601 GTCGAGTGGC TGGAGCAATT TCTCGTGCGC
TTCCCCGGCA CAGTCGTTGC 651 GGTAACGCAC GACCGCTACT TCCTCGACAA
CGCCGCCGAA TGGATTTTGG 701 AACTCGACCG CGGCCATGGT ATTCCGTGGA
AAGGCAATTA CTCGTCTTGG 751 CTGGAGCAGA AAGAAAAACG CTTGGAAAAC
GAGGCAAAAT CCGAAGCCGC 801 GCGCGTGAAG GCGATGAAGC AGGAATTGGA
ATGGGTGCGC CAAAATGCCA 851 AAGGCCGCCA AGCCAAGTCC AAAGCGCGTT
TGGCTCGTTT TGAAGAAATG 901 AGCAACTACG AATACCAAAA ACGCAATGAA
ACGCAGGAAA TCTTTATTCC 951 CGTTGCCGAG CGTTTGGGTA ACGAAGTGAT
TGAATTTGTA AATGTTTCCA 1001 AATCGTTCGG CGATAAAGTG CTGATTGACG
ATTTGAGCTT CAAAGTGCCT 1051 GCGGGCGCGA TTGTCGGCAT CATCGGCCCG
AACGGCGCGG GTAAATCTAC 1101 GCTGTTCAAA ATGATTTCGG GCAAAGAGCA
GCCTGATTCC GGCGAGGTGA 1151 AAATCGGACA AACCGTGAAA ATGAGCTTGA
TTGACCAAAG CCGCGAAGGT 1201 TTGCAAAACG ACAAAACCGT GTTCGACAAC
ATTGCCGAAG GCCGCGACAT 1251 TTTGCAGGTT GGTCAGTTTG AAATTCCCGC
CCGCCAATAT TTGGGGCGTT 1301 TCAACTTCAA AGGCAGCGAC CAAAGCAAAA
TTGCAGGTCA ATTGTCTGGC 1351 GGCGAACGCG GTCGTCTGCA CTTGGCAAAA
ACCTTGTTGA GCGGCGGCAA 1401 TGTATTGCTG CTGGATGAAC CGTCTAACGA
CCTTGACGTG GAAACCCTGC 1451 GCGCGTTGGA AGACGCATTG TTGGAATTTG
CCGGCAGCGT GATGGTGATT 1501 TCGCACGACC GTTGGTTCCT CGACCGCATC
GCCACGCATA TCTTGGCGTG 1551 TGAAGGCGAC TCTAAATGGG TGTTCTTCGA
CGGCAACTAT CAGGAATACG 1601 AAGCCGACAA GAAACGCCGT TTGGGCGAAG
AAGGCGCGAA ACCGAAACGC 1651 ATCAAATACA AACCGGTAAC GCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1874; ORF
596>:
TABLE-US-02247 m596.pep.. 1 MSQQYVYSML RVSKVVPPQK TIIKDISLSF
FPGAKIGLLG LNGAGKSTVL 51 RIMAGVDKEF EGEAVPMGGI KIGYLPQEPE
LDPEKTVREE VESGLGEVAA 101 AQKRLEEVYA EYANPDADFD ALAEEQGRLE
AIIAAGSSTG GGAEHELEIA 151 ADALRLPEWD AKIDNLSGGE KRRVALCKLL
LSKPDMLLLD EPTNHLDAES 201 VEWLEQFLVR FPGTVVAVTH DRYFLDNAAE
WILELDRGHG IPWKGNYSSW 251 LEQKEKRLEN EAKSEAARVK AMKQELEWVR
QNAKGRQAKS KARLARFEEM 301 SNYEYQKRNE TQEIFIPVAE RLGNEVIEFV
NVSKSFGDKV LIDDLSFKVP 351 AGAIVGIIGP NGAGKSTLFK MISGKEQPDS
GEVKIGQTVK MSLIDQSREG 401 LQNDKTVFDN IAEGRDILQV GQFEIPARQY
LGRFNFKGSD QSKIAGQLSG 451 GERGRLHLAK TLLSGGNVLL LDEPSNDLDV
ETLRALEDAL LEFAGSVMVI 501 SHDRWFLDRI ATHILACEGD SKWVFFDGNY
QEYEADKKRR LGEEGAKPKR 551 IKYKPVTR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02248 m596 g596 98.4% identity in 373 aa overlap 160 170
180 190 200 210 m596.pep
LPEWDAKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTV
|||||||||||||||||||||||||||||| g596 MLLLDEPTNHLDAESVEWLEQFLVRFPGTV
10 20 30 220 230 240 250 260 270 m596.pep
VAVTHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g596
VAVTHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQE 40 50
60 70 80 90 280 290 300 310 320 330 m596.pep
LEWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKS
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| g596
LEWVRQNAKGRQAKPKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKS 100
110 120 130 140 150 340 350 360 370 380 390 m596.pep
FGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMISGKEQPDSGEVKIGQTVKMSLID
|||||||| ||||||||||||||||||||||||||||:|||||||||||||||||||||| g596
FGDKVLIDGLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMSLID 160
170 180 190 200 210 400 410 420 430 440 450 m596.pep
QSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGQLSGGERGR
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| g596
QSREGLQNDKIVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIARQLSGGERGR 220
230 240 250 260 270 460 470 480 490 500 510 m596.pep
LHLAKTLLSGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLDRIATHIL
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| g596
LHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLDRIATHIL 280
290 300 310 320 330 520 530 540 550 559 m596.pep
ACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTRX
|||||||||||||||||||||||||||:|||||||||||||||| g596
ACEGDSKWVFFDGNYQEYEADKKRRLGKEGAKPKRIKYKPVTRX 340 350 360 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1875>:
TABLE-US-02249 a596.seq 1 ATGTCCCAAC AATACGTCTA TTCTATGCTG
CGCGTGAGCA AGGTTGTGCC 51 GCCGCAGAAA ACCATCATTA AAGATATTTC
CCTTTCTTTC TTCCCCGGCG 101 CGAAAATCGG TTTGCTCGGT TTGAACGGCG
CGGGCAAGTC CACCGTGCTG 151 CGGATTATGG CGGGCGTGGA TAAAGAATTT
GAGGGCGAAG CCGTGCCGAT 201 GGGCGGTATT AAAATCGGCT ACCTGCCGCA
AGAGCCTGAG CTTGATCCGG 251 AAAAAACCGT GCGTGAGGAA GTGGAAAGCG
GTTTGGGCGA AGTGGCTGCC 301 GCGCAGAAAC GTTTGGAGGA AGTGTATGCC
GAGTACGCCA ATCCCGATGC 351 GGATTTTGAC GCGTTGGCGG AAGAGCAGGG
GCGTTTGGAA GCGATTATTG 401 CGGCGGGTTC GTCCACGGGC GGCGGTGCGG
AACACGAATT GGAAATCGCT 451 GCCGACGCGC TGCGCCTGCC GGAATGGGAT
GCCAAAATCG ATAATTTGTC 501 CGGCGGTGAA AAACGCCGCG TCGCTTTGTG
CAAACTCTTG TTGAGCAAGC 551 CCGATATGCT TTTGCTGGAC GAGCCGACCA
ACCACTTGGA TGCGGAATCG 601 GTCGAGTGGC TGGAGCAATT TCTCGTGCGC
TTCCCCGGTA CAGTCGTTGC 651 CGTAACACAC GACCGCTACT TCCTCGACAA
CGCCGCCGAA TGGATTTTGG 701 AACTCGACCG CGGGCACGGT ATTCCGTGGA
AAGGAAATTA CTCGTCTTGG 751 TTGGAGCAGA AAGAAAAACG TTTGGAAAAC
GAGGCGAAAT CCGAAGCCGC 801 GCGCGTGAAA GCGATGAAGC AGGAATTGGA
ATGGGTGCGC CAAAATGCCA 851 AAGGCCGTCA AGCCAAGTCC AAAGCGCGTT
TGGCGCGTTT TGAAGAAATG 901 AGCAACTATG AATACCAAAA ACGCAATGAA
ACGCAGGAAA TCTTCATTCC 951 CGTCGCCGAG CGTTTGGGTA ACGAAGTGAT
TGAATTTGTG AATGTTTCCA 1001 AATCGTTCGG CGACAAAGTG CTGATTGACG
ATTTGAGCTT CAAAGTGCCT 1051 GCGGGCGCGA TTGTCGGCAT CATCGGTCCG
AACGGCGCGG GTAAATCGAC 1101 ACTGTTTAAA ATGATTGCGG GCAAAGAGCA
GCCCGATTCC GGTGAAGTGA 1151 AAATCGGGCA AACCGTGAAA ATGAGCTTGA
TTGACCAAAG CCGCGAAGGT 1201 TTGCAAAACG ACAAAACCGT GTTCGACAAC
ATTGCCGAAG GTCGCGATAT 1251 TTTACAGGTC GGGCAGTTTG AAATCCCCGC
CCGCCAATAT TTGGGACGCT 1301 TCAATTTCAA AGGCAGCGAC CAAAGCAAAA
TCACGGGGCA GCTTTCCGGC 1351 GGCGAACGCG GACGTTTGCA CTTGGCAAAA
ACCTTGTTGG GCGGTGGCAA 1401 TGTGTTGCTG CTGGACGAAC CGTCCAACGA
CCTCGACGTG GAAACCCTGC 1451 GCGCGTTGGA AGACGCATTG CTGGAATTTG
CCGGCAGCGT GATGGTGATT 1501 TCGCACGACC GCTGGTTCCT CGACCGTATT
GCTACGCATA TCTTGGCTTG 1551 CGAAGGCGAC TCCAAATGGG TGTTCTTTGA
CGGCAACTAT CAGGAATACG 1601 AAGCCGACAA GAAACGCCGA CTCGGCGAAG
AAGGCACGAA ACCGAAACGC 1651 ATCAAATACA AACCGGTAAC GCGTTAA
This corresponds to the amino acid sequence <SEQ ID 1876; ORF
596.a>:
TABLE-US-02250 a596.pep 1 MSQQYVYSML RVSKVVPPQK TIIKDISLSF
FPGAKIGLLG LNGAGKSTVL 51 RIMAGVDKEF EGEAVPMGGI KIGYLPQEPE
LDPEKTVREE VESGLGEVAA 101 AQKRLEEVYA EYANPDADFD ALAEEQGRLE
AIIAAGSSTG GGAEHELEIA 151 ADALRLPEWD AKIDNLSGGE KRRVALCKLL
LSKPDMLLLD EPTNHLDAES 201 VEWLEQFLVR FPGTVVAVTH DRYFLDNAAE
WILELDRGHG IPWKGNYSSW 251 LEQKEKRLEN EAKSEAARVK AMKQELEWVR
QNAKGRQAKS KARLARFEEM 301 SNYEYQKRNE TQEIFIPVAE RLGNEVIEFV
NVSKSFGDKV LIDDLSFKVP 351 AGAIVGIIGP NGAGKSTLFK MIAGKEQPDS
GEVKIGQTVK MSLIDQSREG 401 LQNDKTVFDN IAEGRDILQV GQFEIPARQY
LGRFNFKGSD QSKITGQLSG 451 GERGRLHLAK TLLGGGNVLL LDEPSNDLDV
ETLRALEDAL LEFAGSVMVI 501 SHDRWFLDRI ATHILACEGD SKWVFFDGNY
QEYEADKKRR LGEEGTKPKR 551 IKYKPVTR* 9396/a596 99.3% identity in 558
aa overlap 10 20 30 40 50 60 m596.pep
MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGAGKSTVLRIMAGVDKEF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGAGKSTVLRIMAGVDKEF 10 20
30 40 50 60 70 80 90 100 110 120 m596.pep
EGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQKRLEEVYAEYANPDADFD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
EGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQKRLEEVYAEYANPDADFD 70 80
90 100 110 120 130 140 150 160 170 180 m596.pep
ALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWDAKIDNLSGGEKRRVALCKLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
ALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWDAKIDNLSGGEKRRVALCKLL 130
140 150 160 170 180 190 200 210 220 230 240 m596.pep
LSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
LSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHG 190
200 210 220 230 240 250 260 270 280 290 300 m596.pep
IPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQELEWVRQNAKGRQAKSKARLARFEEM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
IPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQELEWVRQNAKGRQAKSKARLARFEEM 250
260 270 280 290 300 310 320 330 340 350 360 m596.pep
SNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKSFGDKVLIDDLSFKVPAGAIVGIIGP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
SNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKSFGDKVLIDDLSFKVPAGAIVGIIGP 310
320 330 340 350 360 370 380 390 400 410 420 m596.pep
NGAGKSTLFKMISGKEQPDSGEVKIGQTVKMSLIDQSREGLQNDKTVFDNIAEGRDILQV
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a596
NGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMSLIDQSREGLQNDKTVFDNIAEGRDILQV 370
380 390 400 410 420 430 440 450 460 470 480 m596.pep
GQFEIPARQYLGRFNFKGSDQSKIAGQLSGGERGRLHLAKTLLSGGNVLLLDEPSNDLDV
||||||||||||||||||||||||:||||||||||||||||||:|||||||||||||||| a596
GQFEIPARQYLGRFNFKGSDQSKITGQLSGGERGRLHLAKTLLGGGNVLLLDEPSNDLDV 430
440 450 460 470 480 490 500 510 520 530 540 m596.pep
ETLRALEDALLEFAGSVMVISHDRWFLDRIATHILACEGDSKWVFFDGNYQEYEADKKRR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a596
ETLRALEDALLEFAGSVMVISHDRWFLDRIATHILACEGDSKWVFFDGNYQEYEADKKRR 490
500 510 520 530 540 550 559 m596.pep LGEEGAKPKRIKYKPVTRX
|||||:||||||||||||| a596 LGEEGTKPKRIKYKPVTRX 550
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1877>
TABLE-US-02251 g597.seq 1 ATGCTGCTTC ATGTCAGCAA TTCCCTCAAA
CAGCTTCAGG AAGAGCGTAT 51 CCGCCAAGAA CGTATCCGCC AAGAGCGTAT
CCGTCAGGCG CGCGGCAACC 101 TTGCTTCCGT CAACCGCAAA CAGCGCGAGG
CTTGGGACAA ATTCCAAAAA 151 CTCAATACCG AGCTGAACCG TTTGAAAACG
GAAGTCGCCG CTACGAAAGC 201 GCAGATTTCC CGTTTCGTAT CGGGGAACTA
TAAAAACAGC CGGCCGAATG 251 CGGTTGCCCT GTTCCTGAAA AACGCCGAAC
CGGGTCAGAA AAACCGCTTT 301 TTGCGTTATA CGCGTTATGT AAACGCCTCC
AATCGGGAAG TTGTCAAGGA 351 TTTGGAAAAA CAGCAGAAGG CTTTGGCGGT
ACAAGAGCAG AAAATCAACA 401 ATGAGCTTGC CCGTTTGAAG AAAATTCAGG
CAAACGTGCA ATCCCTGCTG 451 AAAAAACAGG GTGTAACCGA TGCGGCGGAA
CAGACGGAAA GCCGCAGACA 501 GAATGCCAAA ATCTCCAAAG ATGCCCGAAA
ACTGCTGGAA CAGAAAGGGA 551 ACGAGCAGCA GCTGAACAAG CTCTTGAGCA
ATTTGgagaa aaAAAaagcc 601 gaacaccgCA TTcaggAtgc ggAagcaaAA
agaAAATTGG CTGAagcCaa 651 actGgcggca gccgAAAAAG CCAGAAAAGA
AGCGGCGCAG CAGAAGGCTG 701 AAGCGCGACG TGCGGAAATG TCCAACCTGA
CCGCCGAAGA CAGGAACATC 751 CAAGCGCCTT CGGTTATGGG TATCGGCAGT
GCCGACGgTT TCAGCCGCAT 801 GCAGGGACGT TTGAAAAAAC CGGTTGACGG
TGTGCCGACC GGGCTTTTCG 851 GGCAGAACCG GAGCGGcggC GATGTTTGGA
AAGGCGTGTT CTATTCCACT 901 GCGCCTGCAA CGGTTGAAAG CATTGCGCcg
gGAACggtaa GCTATGCGGA 951 cgaGTTGGAC GGCTACGGCA AAGTGGTCGT
GATCGATCAC GGCGAGAACT 1001 ACATCAGCAT CTATGCCGGT TTGAGCGAAA
TTTCCGCCGG CAAGGGTTAT 1051 ACGGTCGCGG CAGGAAGCAA AATCGGCACG
AGCGGGTCGC TGCCGGACGG 1101 GGAAGAGGGG CTTTACCTGC AAATACGTTA
TCGAGGTCAG GTGTTGAACC 1151 CTTCGGGCTG GATACGTTGA
This corresponds to the amino acid sequence <SEQ ID 1878; ORF
597>:
TABLE-US-02252 g597.pep 1 MLLHVSNSLK QLQEERIRQE RIRQERIRQA
RGNLASVNRK QREAWDKFQK 51 LNTELNRLKT EVAATKAQIS RFVSGNYKNS
RPNAVALFLK NAEPGQKNRF 101 LRYTRYVNAS NREVVKDLEK QQKALAVQEQ
KINNELARLK KIQANVQSLL 151 KKQGVTDAAE QTESRRQNAK ISKDARKLLE
QKGNEQQLNK LLSNLEKKKA 201 EHRIQDAEAK RKLAEAKLAA AEKARKEAAQ
QKAEARRAEM SNLTAEDRNI 251 QAPSVMGIGS ADGFSRMQGR LKKPVDGVPT
GLFGQNRSGG DVWKGVFYST 301 APATVESIAP GTVSYADELD GYGKVVVIDH
GENYISIYAG LSEISAGKGY 351 TVAAGSKIGT SGSLPDGEEG LYLQIRYRGQ
VLNPSGWIR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1879>:
TABLE-US-02253 m597.seq 1 ATGCTGCTTC ATGTCAGCAA TTCCCTCAAA
CAGCTTCAGG AAGAGCGTAT 51 CCGCCAAGAG CGTATCCGTC AGGCGCGCGG
CAACCTTGCT TCCGTCAACC 101 GCAAACAGCG CGAGGCTTGG GACAAGTTCC
AAAAACTCAA TACCGAGCTG 151 AACCGTTTGA AAACGGAAGT CGCCGCTACG
AAAGCGCAGA TTTCCCGTTT 201 CGTATCGGGG AACTATAAAA ACAGCCAGCC
GAATGCGGTT GCCCTGTTCC 251 TGAAAAACGC CGAACCGGGT CAGAAAAACC
GCTTTTTGCG TTATACGCGT 301 TATGTAAACG CCTCCAATCG GGAAGTTGTC
AAGGATTTGG AAAAACAGCA 351 GAAGGCTTTG GCGGTACAAG AGCAGAAAAT
CAACAATGAG CTTGCCCGTT 401 TGAAGAAAAT TCAGGCAAAC GTGCAATCTC
TGCTGAAAAA ACAGGGTGTA 451 ACCGATGCGG CGGAACAGAC GGAAAGCCGC
AGACAGAATG CCAAAATCGC 501 CAAAGATGCC CGAAAACTGC TGGAACAGAA
AGGGAACGAG CAGCAGCTGA 551 ACAAGCTCTT GAGCAATTTG GAGAAGAAAA
AGGCCGAACA CCGCATTCAG 601 GATGCGGAAG CAAAAAGAAA ATTGGCTGAA
GCCAGACTGG CGGCAGCCGA 651 AAAAGCCAGA AAAGAAGCGG CGCAGCAGAA
GGCTGAAGCA CGACGTGCGG 701 AAATGTCCAA CCTGACCGCC GAAGACAGGA
ACATCCAAGC GCCTTCGGTT 751 ATGGGTATCG GCAGTGCCGA CGGTTTCAGC
CGCATGCAAG GACGTTTGAA 801 AAAACCGGTT GACGGTGTGC CGACCGGACT
TTTCGGGCAG AACCGGAGCG 851 GCGGCGATAT TTGGAAAGGC GTGTTCTATT
CCACTGCACC GGCAACGGTT 901 GAAAGCATTG CGCCGGGAAC GGTAAGCTAT
GCGGACGAGT TGGACGGCTA 951 CGGCAAAGTG GTCGTGGTCG ATCACGGCGA
GAACTACATC AGCATCTATG 1001 CCGGTTTGAG CGAAATTTCC GTCGGCAAGG
GTTATATGGT CGCGGCAGGA 1051 AGCAAAATCG GCTCGAGCGG GTCGCTGCCG
GACGGGGAAG AGGGGCTTTA 1101 CCTGCAAATA CGTTATCAAG GTCAGGTATT
GAACCCTTCG AGCTGGATAC 1151 GTTGA
This corresponds to the amino acid sequence <SEQ ID 1880; ORF
597>:
TABLE-US-02254 m597.pep 1 MLLHVSNSLK QLQEERIRQE RIRQARGNLA
SVNRKQREAW DKFQKLNTEL 51 NRLKTEVAAT KAQISRFVSG NYKNSQPNAV
ALFLKNAEPG QKNRFLRYTR 101 YVNASNREVV KDLEKQQKAL AVQEQKINNE
LARLKKIQAN VQSLLKKQGV 151 TDAAEQTESR RQNAKIAKDA RKLLEQKGNE
QQLNKLLSNL EKKKAEHRIQ 201 DAEAKRKLAE ARLAAAEKAR KEAAQQKAEA
RRAEMSNLTA EDRNIQAPSV 251 MGIGSADGFS RMQGRLKKPV DGVPTGLFGQ
NRSGGDIWKG VFYSTAPATV 301 ESIAPGTVSY ADELDGYGKV VVVDHGENYI
SIYAGLSEIS VGKGYMVAAG 351 SKIGSSGSLP DGEEGLYLQI RYQGQVLNPS
SWIR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 597
shows 96.1% identity over a 389 aa overlap with a predicted ORF
(ORF 597) from N. gonorrhoeae:
TABLE-US-02255 m597/g597 96.1% identity in 389 aa overlap 10 20 30
40 50 60 g597.pep
MLLHVSNSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKT
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| m597
MLLHVSNSLKQLQEERIRQERIRQ-----ARGNLASVNRKQREAWDKFQKLNTELNRLKT 10 20
30 40 50 70 80 90 100 110 120 g597.pep
EVAATKAQISRFVSGNYKNSRPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEK
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| m597
EVAATKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEK 60 70
80 90 100 110 130 140 150 160 170 180 g597.pep
QQKALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKISKDARKLLE
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| m597
QQKALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE 120
130 140 150 160 170 190 200 210 220 230 240 g597.pep
QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEAKLAAAEKARKEAAQQKAEARRAEM
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| m597
QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEM 180
190 200 210 220 230 250 260 270 280 290 300 g597.pep
SNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYST
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| m597
SNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDIWKGVFYST 240
250 260 270 280 290 310 320 330 340 350 360 g597.pep
APATVESIAPGTVSYADELDGYGKVVVIDHGENYISIYAGLSEISAGKGYLVAAGSKIGT
|||||||||||||||||||||||||||:|||||||||||||||||:|||| ||||||||: m597
APATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIGS 300
310 320 330 340 350 370 380 390 g597.pep
SGSLPDGEEGLYLQIRYRGQVLNPSGWIRX |||||||||||||||||:|||||||:|||| m597
SGSLPDGEEGLYLQIRYQGQVLNPSSWIRX 360 370 380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1881>
TABLE-US-02256 a597.seq 1 ATGCTGCTTC ATGTCAGCAA TTCCCTCAAG
CAGCTTCAGG AAGAGCGTAT 51 CCGCCAAGAA CGTATCCGCC AAGAGCGTAT
CCGTCAGGCG CGCGGCAACC 101 TTGCTTCCGT CAACCGCAAA CAGCGCGAGG
CTTGGGACAA GTTCCAAAAA 151 CTCAATACCG AGCTGAACCG TTTGAAAACG
GAAGTCGCCG CTACGAAAGC 201 GCAGATTTCC CGTTTCGTAT CGGGGAACTA
TAAAAACAGC CAGCCGAATG 251 CGGTTGCCCT GTTCCTGAAA AACGCCGAAC
CGGGTCAGAA AAACCGCTTT 301 TTGCGTTATA CGCGTTATGT AAACGCCTCC
AATCGGGAAG TTGTCAAGGA 351 TTTGGAAAAA CAGCAGAAGG CTTTGGCGGT
ACAAGAGCAG AAAATCAACA 401 ATGAGCTTGC CCGTTTGAAG AAAATTCAGG
CAAACGTGCA ATCCCTGCTG 451 AAAAAACAGG GTGTAACCGA TGCGGCGGAA
CAGACGGAAA GCCGCAGACA 501 GAATGCCAAA ATCGCCAAAG ATGCCCGAAA
ACTGCTGGAA CAGAAAGGGA 551 ACGAGCAGCA GCTGAACAAG CTCTTGAGCA
ATTTGGAGAA GAAAAAGGCC 601 GAACACCGCA TTCAGGATGC GGAAGCAAAA
AGAAAATTGG CTGAAGCCAG 651 ACTGGCGGCA GCCGAAAAAG CCAGAAAAGA
AGCGGCGCAG CAGAAGGCTG 701 AAGCACGACG TGCGGAAATG TCCAACCTGA
CCGCCGAAGA CAGGAACATC 751 CAAGCGCCTT CGGTTATGGG TATCGGCAGT
GCCGACGGTT TCAGCCGCAT 801 GCAAGGACGT TTGAAAAAAC CGGTTGACGG
TGTGCCGACC GGACTTTTCG 851 GGCAGAACCG GAGCGGCGGC GATGTTTGGA
AAGGCGTGTT CTATTCCACT 901 GCACCGGCAA CGGTTGAAAG CATTGCGCCG
GGAACGGTAA GCTATGCGGA 951 CGAGTTGGAC GGCTACGGCA AAGTGGTCGT
GGTCGATCAC GGCGAGAACT 1001 ACATCAGCAT CTATGCCGGT TTGAGCGAAA
TTTCCGTCGG CAAGGGTTAT 1051 ATGGTCGCGG CAGGAAGCAA AATCGGCTCG
AGCGGGTCGC TGCCGGACGG 1101 GGAAGAGGGG CTTTACCTGC AAATACGTTA
TCAAGGTCAG GTATTGAACC 1151 CTTCGAGCTG GATACGTTGA
This corresponds to the amino acid sequence <SEQ ID 1882; ORF
597.a>:
TABLE-US-02257 a597.pep 1 MLLHVSNSLK QLQEERIRQE RIRQERIRQA
RGNLASVNRK QREAWDKFQK 51 LNTELNRLKT EVAATKAQIS RFVSGNYKNS
QPNAVALFLK NAEPGQKNRF 101 LRYTRYVNAS NREVVKDLEK QQKALAVQEQ
KINNELARLK KIQANVQSLL 151 KKQGVTDAAE QTESRRQNAK IAKDARKLLE
QKGNEQQLNK LLSNLEKKKA 201 EHRIQDAEAK RKLAEARLAA AEKARKEAAQ
QKAEARRAEM SNLTAEDRNI 251 QAPSVMGIGS ADGFSRMQGR LKKPVDGVPT
GLFGQNRSGG DVWKGVFYST 301 APATVESIAP GTVSYADELD GYGKVVVVDH
GENYISIYAG LSEISVGKGY 351 MVAAGSKIGS SGSLPDGEEG LYLQIRYQGQ
VLNPSSWIR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 597
shows 98.5% identity over a 389 aa overlap with a predicted ORF
(ORF 597) from N. meningitidis
TABLE-US-02258 m597/a597 98.5% identity in 389 aa overlap 10 20 30
40 50 60 a597.pep
MLLHVSNSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKT
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| m597
MLLHVSNSLKQLQEERIRQERIRQ-----ARGNLASVNRKQREAWDKFQKLNTELNRLKT 10 20
30 40 50 70 80 90 100 110 120 a597.pep
EVAATKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m597
EVAATKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEK 60 70
80 90 100 110 130 140 150 160 170 180 a597.pep
QQKALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m597
QQKALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE 120
130 140 150 160 170 190 200 210 220 230 240 a597.pep
QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m597
QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEM 180
190 200 210 220 230 250 260 270 280 290 300 a597.pep
SNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYST
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| m597
SNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDIWKGVFYST 240
250 260 270 280 290 310 320 330 340 350 360 a597.pep
APATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m597
APATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIGS 300
310 320 330 340 350 370 380 390 a597.pep
SGSLPDGEEGLYLQIRYQGQVLNPSSWIRX |||||||||||||||||||||||||||||| m597
SGSLPDGEEGLYLQIRYQGQVLNPSSWIRX 360 370 380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1883>:
TABLE-US-02259 g601.seq 1 ATGTTCCCAA CCGGCAATTT GGTCGACGAA
ATTGATGTGC CGAATATAGG 51 TCGTCTGAAA GCCACGCTCA TCAACGCGGG
CATTCCGACC GTTTTCCTGA 101 ACGCCGCCGA CTTGGGCTAC ACGGGCAAAG
AGTTGCAGGA CGACATCAAC 151 AACGATGCCG CCGCGCTGGA AAAATTTGAA
ACCATCCGCG CATATGGCGC 201 GCTGAAAATG GGTTTGATCA GCGACGTATC
CGAAGCCGCC GCCCGCGCGC 251 GCACGCCGAA ACCCGCCTTC GTCGCGCCCG
CCGCCGATTA CACCGCCTCC 301 AGCGGCAAAA CCGTAAACGC CGCCGACATC
GATTTGCCGG TACGCGCCCT 351 GAGCATGGGC AAACTGCACC ACGCTATGAT
GGGCATCGCC TCGGTCGCCA 401 TCGCCGCCGC CGTGCTCGGT ACGCTGGTCA
ACCTTGCCGC AGGCGGCGGA 451 ACGCGTAAAG AAGTGCGCTT CGGGCATCCG
TCAGGTACGC TGCGTGTCGG 501 TGCTGCCGCC GAATGTCAGG ACGGACAATG
GACGGCCGCc aaagcggtca 551 tgaGCCGCAG CGCACgcgtg attatggaaa
gttgGGTGCg cgttcccgat 601 gattGTTTTT GA
This corresponds to the amino acid sequence <SEQ ID 1884; ORF
601.ng>:
TABLE-US-02260 g601.pep 1 MFPTGNLVDE IDVPNIGRLK ATLINAGIPT
VFLNAADLGY TGKELQDDIN 51 NDAAALEKFE TIRAYGALKM GLISDVSEAA
ARARTPKPAF VAPAADYTAS 101 SGKTVNAADI DLPVRALSMG KLHHAMMGIA
SVAIAAAVLG TLVNLAAGGG 151 TRKEVRFGHP SGTLRVGAAA ECQDGQWTAA
KAVMSRSARV IMESWVRVPD 201 DCF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1885>:
TABLE-US-02261 m601.seq 1 ATGTTCCCAA CCGGCAATTT GGTCGATGAA
ATTGATGTGC CGAATATAGG 51 CCGTTTGAAA GCCACGCTCA TCAACGCGGG
CATTCCGACC GTTTTCTTGA 101 ATGCCGCCGA CTTGGGCTAC ACAGGCAAAG
AGTTGCAAGA CGACATCAAC 151 AACGATGCCG CGGCTTTGGA AAAATTCGAG
AAAATCCGCG CTTACGGTGC 201 GCTGAAAATG GGTCTGATCA GCGACGTATC
CGAAGCTGCC GCTCGCGCGC 251 ACACGCCGAA AGTCGCCTTC GTCGCGCCCG
CCGCCGATTA CACCGCCTCC 301 AGTGGCAAAA CCGTGAACGC CGCCGACATC
GATTTGCTGG TACGCGCCCT 351 GAGCATGGGC AAACTGCACC ACGCGATGAT
GGGTACCGCC TCTGTTGCCA 401 TTGCGACCGC CGCCGCCGTA CCCGGTACGC
TGGTCAACCT TGCCGCAGGC 451 GGCGGAACGC GTAAAGAAGT GCGCTTCGGG
CATCCTTCCG GCACATTGCG 501 CGTCGGTGCA GCCGCCGAAT GTCAGGACGG
ACAATGGACG GCCACCAAAG 551 CGGTCATGAG CCGTAGCGCA CGCGTGATGA
TGGAAGGTTG GGTCAGGGTG 601 CCTGAGGATT GTTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1886; ORF
601>:
TABLE-US-02262 m601.pep 1 MFPTGNLVDE IDVPNIGRLK ATLINAGIPT
VFLNAADLGY TGKELQDDIN 51 NDAAALEKFE KIRAYGALKM GLISDVSEAA
ARAHTPKVAF VAPAADYTAS 101 SGKTVNAADI DLLVRALSMG KLHHAMMGTA
SVAIATAAAV PGTLVNLAAG 151 GGTRKEVRFG HPSGTLRVGA AAECQDGQWT
ATKAVMSRSA RVMMEGWVRV 201 PEDCF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 601
shows 94.1% identity over a 205 aa overlap with a predicted ORF
(ORF 601.ng) from N. gonorrhoeae:
TABLE-US-02263 m601/g601 10 20 30 40 50 60 m601.pep
MFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAALEKFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g601
MFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAALEKFE 10 20
30 40 50 60 70 80 90 100 110 120 m601.pep
KIRAYGALKMGLISDVSEAAARAHTPKVAFVAPAADYTASSGKTVNAADIDLLVRALSMG
||||||||||||||||||||||:||| |||||||||||||||||||||||| ||||||| g601
TIRAYGALKMGLISDVSEAAARARTPKPAFVAPAADYTASSGKTVNAADIDLPVRALSMG 70 80
90 100 110 120 130 140 150 160 170 180 m601.pep
KLHHAMMGTASVAIATAAAVPGTLVNLAAGGGTRKEVRFGHPSGTLRVGAAAECQDGQWT
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| g601
KLHHAMMGIASVAI--AAAVLGTLVNLAAGGGTRKEVRFGHPSGTLRVGAAAECQDGQWT 130
140 150 160 170 190 200 m601.pep ATKAVMSRSARVMMEGWVRVPEDCFX
|:||||||||||:||:|||||:|||| g601 AAKAVMSRSARVIMESWVRVPDDCFX 180 190
200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1887>:
TABLE-US-02264 a601.seq 1 ATGTTCCCAA CCGGCAATTT GGTCGATGAA
ATTGATGTGC CGAATATAGG 51 CCGTTTGAAA GCCACGCTCA TCAACGCGGG
CATTCCGACC GTTTTCCTGA 101 ATGCCGCCGA CTTGGGCTAC ACGGGCAAAG
AGTTGCAAGA CGACATCAAC 151 AACGATGCCG CAGCTTTGGA AAAATTCGAG
AAAATCCGCG CTTACGGTGC 201 GCTGAAAATG GGTCTGATCA GCGACGTATC
CGAAGCTGCC GCCCGCGCGC 251 ACACGCCGAA AGTCGCCTTC GTCGCGCCCG
CCGCCGATTA CACCGCCTCC 301 AGTGGCAAAA CCGTGAATGC CGCCGACATC
GATTTGCTGG TACGCGCCCT 351 GAGCATGGGC AAATTGCACC ACGCGATGAT
GGGTACCGCC TCTGTTGCCA 401 TTGCGACCGC CGCCGCCGTG CCCGGTACGC
TGGTCAACCT TGCCGCAGGC 451 GGCGGAACGC GTAAAGAAGT GCGCTTCGGG
CATCCTTCCG GCACATTGCG 501 CGTCGGTGCA GCCGCCGAAT GTCAGGACGG
ACAATGGACG GCCACCAAAG 551 CGGTTATGAG CCGCAGCGCA CGCGTGATGA
TGGAAGGTTG GGTCAGGGTG 601 CCGGAAGATT GTTTTTAA
This corresponds to the amino acid sequence <SEQ ID 1888; ORF
601.a>:
TABLE-US-02265 a601.pep 1 MFPTGNLVDE IDVPNIGRLK ATLINAGIPT
VFLNAADLGY TGKELQDDIN 51 NDAAALEKFE KIRAYGALKM GLISDVSEAA
ARAHTPKVAF VAPAADYTAS 101 SGKTVNAADI DLLVRALSMG KLHHAMMGTA
SVAIATAAAV PGTLVNLAAG 151 GGTRKEVRFG HPSGTLRVGA AAECQDGQWT
ATKAVMSRSA RVMMEGWVRV 201 PEDCF* m601/a601 100.0% identity in 205
aa overlap 10 20 30 40 50 60 m601.pep
MFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAALEKFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a601
MFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAALEKFE 10 20
30 40 50 60 70 80 90 100 110 120 m601.pep
KIRAYGALKMGLISDVSEAAARAHTPKVAFVAPAADYTASSGKTVNAADIDLLVRALSMG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a601
KIRAYGALKMGLISDVSEAAARAHTPKVAFVAPAADYTASSGKTVNAADIDLLVRALSMG 70 80
90 100 110 120 130 140 150 160 170 180 m601.pep
KLHHAMMGTASVAIATAAAVPGTLVNLAAGGGTRKEVRFGHPSGTLRVGAAAECQDGQWT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a601
KLHHAMMGTASVAIATAAAVPGTLVNLAAGGGTRKEVRFGHPSGTLRVGAAAECQDGQWT 130
140 150 160 170 180 190 200 m601.pep ATKAVMSRSARVMMEGWVRVPEDCFX
|||||||||||||||||||||||||| a601 ATKAVMSRSARVMMEGWVRVPEDCFX 190
200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1889>:
TABLE-US-02266 g602.seq 1 ATGTTGCTCC ATCAATGCGA CAAAGCGCGA
CATATGCGTC CCTTTCTGCT 51 CGGCGGGCAG ATAAACCGTC ATCGTCAGGC
GAGCAACCGT GGATTGTGTT 101 CCTTCGGCGG TTTTCAGGGT AATCGGGAAG
CGCAGGTCTT TAATGCCGAC 151 CTGATTGATC GGCAGGTTGC GCAAATCTCT
GCTGGATTGC ACGTCTGCAA 201 TGGCGTTCAT GCGTTGTTTG TCCTTAATAT
TCAGATAATT ATTGAGATGT 251 GTGTATTGTA TGGCAGGcag atgccgtctg
aAAAAacgct gtcggCCGCC 301 TGCCTGCAAA TgcgagattA TATCACTTGC
TTTtggcgGC TGCATTGA
This corresponds to the amino acid sequence <SEQ ID 1890; ORF
602.ng>:
TABLE-US-02267 g602.pep 1 MLLHQCDKAR HMRPFLLGGQ INRHRQASNR
GLCSFGGFQG NREAQVFNAD 51 LIDRQVAQIS AGLHVCNGVH ALFVLNIQII
IEMCVLYGRQ MPSEKTLSAA 101 CLQMRDYITC FWRLH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1891>:
TABLE-US-02268 m602.seq 1 ATGTTGCTCC ATCAATGCGA CAAAACGCGA
CATATGCGTC CCCTTCTGCT 51 CAGCAGGCAG GTAAACCGTC ATGGTCAGAC
GGGCAATGGT GGACTGGATG 101 CCTTCTGCAG TTTGCAGGGT AATCGGAAAG
CGCAGGTCTT TGATACCGAC 151 CTGATTGATC GGCAGATTGC GCAAATCTCG
GCTGGATTGC ACGTCTGCAA 201 TAGTGTTCAT GAGTTGTTTT TCCTTAATAT
TCATGTAATT GTTGAGATGT 251 GTGCATGGTA TGGCGTTTCC GCCGGGGAAT
ATACCGTCAA TCTGCAAATG 301 CGAGATTATA TCACTCGCTT TTAGCAGCTG
CATTGA
This corresponds to the amino acid sequence <SEQ ID 1892; ORF
602>:
TABLE-US-02269 m602.pep 1 MLLHQCDKTR HMRPLLLSRQ VNRHGQTGNG
GLDAFCSLQG NRKAQVFDTD 51 LIDRQIAQIS AGLHVCNSVH ELFFLNIHVI
VEMCAWYGVS AGEYTVNLQM 101 RDYITRF*QL H* m602/g602 65.2% identity in
115 aa overlap 10 20 30 40 50 60 m602.pep
MLLHQCDKTRHMRPLLLSRQVNRHGQTGNGGLDAFCSLQGNRKAQVFDTDLIDRQIAQIS
||||||||:|||||:||: |:||| |::| || :| ::||||:||||::||||||:|||| g602
MLLHQCDKARHMRPFLLGGQINRHRQASNRGLCSFGGFQGNREAQVFNADLIDRQVAQIS 10 20
30 40 50 60 70 80 90 100 110 m602.pep
AGLHVCNSVHELFFLNIHVIVEMCAWYGVSA-GEYTVN---LQMRDYITRFXQLHX |||||||:||
|| |||::|:|||: || : :| |:: |||||||| | :||| g602
AGLHVCNGVHALFVLNIQIIIEMCVLYGRQMPSEKTLSAACLQMRDYITCFWRLHX 70 80 90
100 110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1893>:
TABLE-US-02270 a602.seq 1 ATGTTGCTCC ATCAATGCGA CAAAGCGCGA
CATATGCGTA CCCTTCTGCT 51 CGGCAGGCAG GTAAACCGTC ATGGTCAGAC
GGGCAACTGT GGACTGGATG 101 CCTTCTGCAG TTTGCAGGGT AATCGGAAAG
CGCAGGTCTT TGATACCGAC 151 CTGATTGATC GGCAGATTGC GCAAATCTCG
GCTGGATTGC ACGTCTGCAA 201 TAGTGTTCAT GAGTTGTTTT TCCTTAATAT
TCATGTAATT GTTGAGATGT 251 GTGCATGGTA TGGCGTTTCC ACCGGGGAAT
ATACCGTCAA TCTGCAAATG 301 CGAGATTATA TCACTCGCTT TTAGCAGCTG
CATTGA
This corresponds to the amino acid sequence <SEQ ID 1894; ORF
602.a>:
TABLE-US-02271 a602.pep 1 MLLHQCDKAR HMRTLLLGRQ VNRHGQTGNC
GLDAFCSLQG NRKAQVFDTD 51 LIDRQIAQIS AGLHVCNSVH ELFFLNIHVI
VEMCAWYGVS TGEYTVNLQM 101 RDYITRF*QL H* m602/a602 95.5% identity in
111 aa overlap 10 20 30 40 50 60 m602.pep
MLLHQCDKTRHMRPLLLSRQVNRHGQTGNGGLDAFCSLQGNRKAQVFDTDLIDRQIAQIS
||||||||:|||| |||:||||||||||| |||||||||||||||||||||||||||||| a602
MLLHQCDKARHMRTLLLGRQVNRHGQTGNCGLDAFCSLQGNRKAQVFDTDLIDRQIAQIS 10 20
30 40 50 60 70 80 90 100 110 m602.pep
AGLHVCNSVHELFFLNIHVIVEMCAWYGVSAGEYTVNLQMRDYITRFXQLHX
||||||||||||||||||||||||||||||:||||||||||||||||||||| a602
AGLHVCNSVHELFFLNIHVIVEMCAWYGVSTGEYTVNLQMRDYITRFXQLHX 70 80 90 100
110
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1895>:
TABLE-US-02272 g603.seq 1 ATGGATTCCC GCCTGCGTGG GAATGACGCT
AGGAAATACG GCATACGCTT 51 TGCCCAAAGA GGCCGTCTGA AACACACTCC
GCCCAACGCC CATCCTTTTT 101 CAGACGGCCC CGCACCAAAA AAACAACCAC
AAACTACAAG GAGAAACATC 151 ATGTCCGACC AACTCATTCT TGTCCTGAAC
TGCGTCAGTT CATCGCTCAA 201 AGGCGCCGTT ATCGACCGCA AAAGCGGCAG
CGTCGTCCTA AGCTGCCTCG 251 GGGAACGCCT GACTACGCCC GAAGCCGTCA
TTACCTTCAA CAAAGACGGC 301 AACAAACGCC AAGTTCCCCT GAGCGGCCGC
AACTGCCACG CCGGCGCGGT 351 GGGTATGCTG TTGAACGAAC TGGAAAAACA
CGGACTGCAC GACCGCATCA 401 AAGCCATCGG CCGCCGCATC GCCCACGGCG
GCGAAAAATA TCACGAGTCC 451 GTCCTCATCG ACCAAGACGT CCTTGACGAA
CTGAAAGCCT GCATCCCGTT 501 CGCCCCGCTG CACAACCCCG CCAACATCAG
CGGCATCCTC GCCGCGCAGG 551 AACACTTTCC CGGCCTGCCC AACGTCGGCG
TGATGGACAC CTCGTTCCAC 601 CAAACCATGC CGGAGCGGGC CTACACTTAT
GCCGTGCCGC GCGAATTGCG 651 CAAAAAATAC GCCTTCCGCC GCTACGGTTT
CCACGGTACC GGTATGCGTT 701 ACGTCGCCCC TGAAGCCGCA CGCATCTTGG
GCAAACCTct ggaaGACATC 751 CGCATGATTA TTGCCCACTT AGGCAACGGC
GCATCTATTA CCGCCGTCAA 801 AAACGGCAAA TCCGTCGATA CCGGTATGGG
TTTCACGCCG ATCGAAGGTT 851 TGGTAATGGG TACACGTTGC GGCGACACCG
ATCCGGGCGT ATACAGCTAT 901 CCGACTTTCC ACGCAGGGAT GGATGTTGCC
CAAGTTGATG AAATGCTGAA 951 CGAAAAATCA GGTTTCCCCG GTATTTCcgA
actTCCCAAC GACTGCCGCA 1001 CCCTCGAAAT CGCCGCCGAC GAAGGCCGCG
AAGGCGCGCG CCTCGCCCTc 1051 gaAGTCATGA CCTGCCGCCT CGCCAAATAC
ATCGCTTCGA TGGCTGTGGC 1101 CTGCGGCAGT GTTGACGCAC TCGTGTTCAC
CGGCGGTATC GGCGAAAACT 1151 CGCGTAATAT CCGTGCCAAA ACCGTTTCCT
ATCTTGATTT CTTGGGTCTG 1201 CACATCGACA CCAAAGCCAA TATGGAAAAA
CGCTACGGCA ATTCGGGCAT 1251 TATCAGCCCG ACCGATTCTT CTCCGGCTGT
TTTGGTCGTC CCGACCAATG 1301 AAGAACTGAT GATTGCCTGC GACACTGCCG
AACTTGCCGG CATCTTGTAG
This corresponds to the amino acid sequence <SEQ ID 1896; ORF
603.ng>:
TABLE-US-02273 g603.pep 1 MDSRLRGNDA RKYGIRFAQR GRLKHTPPNA
HPFSDGPAPK KQPQTTRRNI 51 MSDQLILVLN CVSSSLKGAV IDRKSGSVVL
SCLGERLTTP EAVITFNKDG 101 NKRQVPLSGR NCHAGAVGML LNELEKHGLH
DRIKAIGRRI AHGGEKYHES 151 VLIDQDVLDE LKACIPFAPL HNPANISGIL
AAQEHFPGLP NVGVMDTSFH 201 QTMPERAYTY AVPRELRKKY AFRRYGFHGT
GMRYVAPEAA RILGKPLEDI 251 RMIIAHLGNG ASITAVKNGK SVDTGMGFTP
IEGLVMGTRC GDTDPGVYSY 301 PTFHAGMDVA QVDEMLNEKS GFPGISELPN
DCRTLEIAAD EGREGARLAL 351 EVMTCRLAKY IASMAVACGS VDALVFTGGI
GENSRNIRAK TVSYLDFLGL 401 HIDTKANMEK RYGNSGIISP TDSSPAVLVV
PTNEELMIAC DTAELAGIL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1897>:
TABLE-US-02274 m603.seq 1 CTGTCCTCGC GTAGGCGGGG ACGGAATAAC
GATAGAAAAT GCGGCATACG 51 CTTTGCCCAA AGAGGCCGTC TGAAACACCT
TGCGCCTGAT GTCTGC.CTT 101 TTTCAGACGA CCCCACACTA AAAAAACAAC
CACAAACTAC AAGGAGAAAC 151 ATCATGTCCG ACCAACTCAT CCTCGTTCTG
AACTGCGGCA GTTCATCGCT 201 CAAAGGCGCC GTTATCGACC GAmAAAGCGG
CAGCGTCGTC CTAAGCTGCC 251 TCGGCGAACG cCtGACCACG CCCGAAGCCG
TCATTACGTT CAACAAAGAC 301 GGCAACAAAC GCCAAGTTCC CCTGAGCGGC
CGAAATTGCC ACGCCGGCGC 351 GGTGGGTATG CTTTTGAACG AACTGGAAAA
ACACGGTCTG CACGACCGCA 401 TCAAAGCCAT CGGCCACCGC ATCGCCCACG
GCGGCGAAAA ATACAGCGAG 451 TCTGTTTTGA TCGACCAGGC CGTAATGGAC
GAACTCAATG CCTGCATTCC 501 GCTTGCGCCG CTGCACAACC CCGCCAACAT
CAGCGGCATC CTTGCCGCAC 551 AGGAACATTT CCCCGGTCTG CCCAATGTCG
GCGTGATGGA TACTTCGTTC 601 CACCAAACCA TGCCGGAGCG TGCCTACACT
TATGCCGTGC CGCGCGAGTT 651 GCGTAAAAAA TACGCTTTCC GCCGCTACGG
TTTCCACGGC ACCAGTATGC 701 GTTACGTTGC CCCTGAAGCC GCACGCATCT
TGGGCAAACC TCTGGAAGAC 751 ATCCGCATGA TTATTGCCCA CTTAGGCAAC
GGCGCATCCA TTACCGCCAT 801 CAAAAACGGC AAATCCGTCG ATACCAGTAT
GGGTTTCACG CCGATCGAAG 851 GTTTGGTAAT GGGTACACGT TGCGGCGACA
TCGATCCGGG CGTATACAGC 901 TATCTGACTT CCCACGCCGG GATGGATGTT
GCCCAAGTGG ATGAAATGCT 951 GAACAAAAAA TCAGGTTTGC TCGGTATTTC
CGAACTTTCC AACGACTGCC 1001 GCACCCTCGA AATCGCCGCC GACGAAGGCC
ACGAAGGCGC GCGCCTCGCC 1051 CTCGAAGTCA TGACCTACCG CCTCGCCAAA
TACATCGCTT CGATGGCTGT 1101 GGGCTGCGGC GGCGTTGACG CACTCGTGTT
CACCGGCGGT ATCGGCGAAA 1151 ACTCGCGTAA TATCCGTGCC AAAACCGTTT
CCTATCTTGA TTTCTTGGGT 1201 CTGCACATCG ACACCAAAGC CAATATGGAA
AAACGCTACG GCAATTCGGG 1251 CATTATCAGC CCGACCGATT CTTCTCCGGC
TGTTTTGGTT GTCCCGACCA 1301 ATGAAGAACT GATGATTGCC TGCGACACTG
CCGAACTTGC CGGCATCTTG 1351 TAG
This corresponds to the amino acid sequence <SEQ ID 1898; ORF
603>:
TABLE-US-02275 m603.pep 1 LSSRRRGRNN DRKCGIRFAQ RGRLKHLAPD
VCXFSDDPTL KKQPQTTRRN 51 IMSDQLILVL NCGSSSLKGA VIDRXSGSVV
LSCLGERLTT PEAVITFNKD 101 GNKRQVPLSG RNCHAGAVGM LLNELEKHGL
HDRIKAIGHR IAHGGEKYSE 151 SVLIDQAVMD ELNACIPLAP LHNPANISGI
LAAQEHFPGL PNVGVMDTSF 201 HQTMPERAYT YAVPRELRKK YAFRRYGFHG
TSMRYVAPEA ARILGKPLED 251 IRMIIAHLGN GASITAIKNG KSVDTSMGFT
PIEGLVMGTR CGDIDPGVYS 301 YLTSHAGMDV AQVDEMLNKK SGLLGISELS
NDCRTLEIAA DEGHEGARLA 351 LEVMTYRLAK YIASMAVGCG GVDALVFTGG
IGENSRNIRA KTVSYLDFLG 401 LHIDTKANME KRYGNSGIIS PTDSSPAVLV
VPTNEELMIA CDTAELAGIL 451 *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 603
shows 91.6% identity over a 450 aa overlap with a predicted ORF
(ORF 603.ng) from N. gonorrhoeae:
TABLE-US-02276 m603/g603 10 20 30 40 50 60 m603.pep
LSSRRRGRNNDRKCGIRFAQRGRLKHLAPDVCXFSDDPTLKKQPQTTRRNIMSDQLILVL ::||
|| |: || |||||||||||| |:: ||| |: |||||||||||||||||||| g603
MDSRLRG-NDARKYGIRFAQRGRLKHTPPNAHPFSDGPAPKKQPQTTRRNIMSDQLILVL 10 20
30 40 50 70 80 90 100 110 120 m603.pep
NCGSSSLKGAVIDRXSGSVVLSCLGERLTTPEAVITFNKDGNKRQVPLSGRNCHAGAVGM ||
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| g603
NCVSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVITFNKDGNKRQVPLSGRNCHAGAVGM 60 70
80 90 100 110 130 140 150 160 170 180 m603.pep
LLNELEKHGLHDRIKAIGHRIAHGGEKYSESVLIDQAVMDELNACIPLAPLHNPANISGI
||||||||||||||||||:||||||||| ||||||| |:|||:||||:|||||||||||| g603
LLNELEKHGLHDRIKAIGRRIAHGGEKYHESVLIDQDVLDELKACIPFAPLHNPANISGI 120
130 140 150 160 170 190 200 210 220 230 240 m603.pep
LAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGTSMRYVAPEA
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| g603
LAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGTGMRYVAPEA 180
190 200 210 220 230 250 260 270 280 290 300 m603.pep
ARILGKPLEDIRMIIAHLGNGASITAIKNGKSVDTSMGFTPIEGLVMGTRCGDIDPGVYS
||||||||||||||||||||||||||:||||||||:||||||||||||||||| |||||| g603
ARILGKPLEDIRMIIAHLGNGASITAVKNGKSVDTGMGFTPIEGLVMGTRCGDTDPGVYS 240
250 260 270 280 290 310 320 330 340 350 360 m603.pep
YLTSHAGMDVAQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLALEVMTYRLAK | |
||||||||||||||:|||: ||||| |||||||||||||:||||||||||| |||| g603
YPTFHAGMDVAQVDEMLNEKSGFPGISELPNDCRTLEIAADEGREGARLALEVMTCRLAK 300
310 320 330 340 350 370 380 390 400 410 420 m603.pep
YIASMAVGCGGVDALVFTGGIGENSRNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIIS
|||||||:||:||||||||||||||||||||||||||||||||||||||||||||||||| g603
YIASMAVACGSVDALVFIGGIGENSRNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIIS 360
370 380 390 400 410 430 440 450 m603.pep
PTDSSPAVLVVPTNEELMIACDTAELAGILX |||||||||||||||||||||||||||||||
g603 PTDSSPAVLVVPTNEELMIACDTAELAGILX 420 430 440 450
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1899>:
TABLE-US-02277 a603.seq 1 CTGTCCTCGC GTAGGCGGGG ACGGAATAAC
GATAGAAAAT GCGGCATACG 51 CTTTGCCCAA AGAGGCCGTC TGAAACACAC
TCCGCCCAAC GCCCATCCTT 101 TTTCAGACGA CCCCACACC. AAAAAACAAC
CACAAACTAC AAGGAGAAAC 151 ATCATGTCCG ACCAACTCAT TCTTGTTCTG
AACTGCGGCA GTTCATCGCT 201 CAAAGGTGCC GTTATCGACC GCAAAAGCGG
CAGCGTCGTC CTAAGCTGCC 251 TCGGCGAACG CCTGACCACG CCCGAAGCCG
TCATTACGTT CAGCAAAGAC 301 GGCAACAAAC GCCAAGTTCC CCTGAGCGGC
CGGAACTGCC ACGCCGGCGC 351 GGTGGGTATG CTGTTGAACG AACTGGAAAA
ACACGAACTG CACGACCGCA 401 TTCAAGCCGT CGGCCACCGC ATCGCCCACG
GCGGCGAAAA ATACAGCGAG 451 TCTGTTTTGA TCGACCAGGC CGTAATGGAC
GAACTCAATG CCTGCATTCC 501 GCTTGCGCCG CTGCACAACC CCGCCAACAT
CAGCGGCATC CTCGCCGCAC 551 AGGAACATTT CCCCGGTCTG CCCAATGTCG
GCGTGATGGA TACTTCGTTC 601 CACCAAACCA TGCCGGAGCG TGCCTACACT
TATGCCGTGC CGCGCGAGTT 651 GCGTAAAAAA TACGCTTTCC GCCGCTACGG
TTTCCACGGC ACCAGTATGC 701 GTTACGTTGC CCCTGAAGCC GCATGCATCT
TGGGCAAACC TCTGGAAGAC 751 ATCCGCATGA TTATTGCCCA CTTAGGCAAC
GGCGCATCCA TTACCGCCAT 801 CAAAAACGGC AAATCCGTCG ATACCAGTAT
GGGTTTCACG CCGATCGAAG 851 GTTTGGTAAT GGGTACGCGC TGCGGCGATA
TCGACCCGGG CGTATACAGC 901 TATCTGACTT CACACGCCGG TTTGGATGTT
GCACAAGTTG ATGAAATGCT 951 GAATAAAAAA TCAGGCTTGC TCGGTATTTC
CGAACTCTCC AACGACTGCC 1001 GCACCCTCGA AATCGCCGCC GACGAAGGCC
ACGAAGGCGC GCGCCTCGCC 1051 CTCGAAGTTA TGACCTACCG CCTCGCCAAA
TACATCGCTT CGATGGCTGT 1101 GGGCTGCGGC GGCGTTGACG CACTCGTGTT
CACCGGCGGT ATCGGCGAAA 1151 ACTCGCGTAA TATCCGTGCC AAAACCGTTT
CCTATCTTGA TTTCTTGGGT 1201 CTGCACATCG ACACCAAAGC CAATATGGAA
AAACGCTACG GCAATTCGGG 1251 TATTATCAGC CCGACCGATT CTTCTCCGGC
TGTTTTGGTT GTCCCGACCA 1301 ATGAAGAACT GATGATTGCC TGCGACACTG
CCGAACTTGT CGGCATCTTG 1351 TAG
This corresponds to the amino acid sequence <SEQ ID 1900; ORF
603.a>:
TABLE-US-02278 a603.pep 1 LSSRRRGRNN DRKCGIRFAQ RGRLKHTPPN
AHPFSDDPTX KKQPQTTRRN 51 IMSDQLILVL NCGSSSLKGA VIDRKSGSVV
LSCLGERLTT PEAVITFSKD 101 GNKRQVPLSG RNCHAGAVGM LLNELEKHEL
HDRIQAVGHR IAHGGEKYSE 151 SVLIDQAVMD ELNACIPLAP LHNPANISGI
LAAQEHFPGL PNVGVMDTSF 201 HQTMPERAYT YAVPRELRKK YAFRRYGFHG
TSMRYVAPEA ACILGKPLED 251 IRMIIAHLGN GASITAIKNG KSVDTSMGFT
PIEGLVMGTR CGDIDPGVYS 301 YLTSHAGLDV AQVDEMLNKK SGLLGISELS
NDCRTLEIAA DEGHEGARLA 351 LEVMTYRLAK YIASMAVGCG GVDALVFTGG
IGENSRNIRA KTVSYLDFLG 401 LHIDTKANME KRYGNSGIIS PTDSSPAVLV
VPTNEELMIA CDTAELVGIL 451 * m603/a603 96.7% identity in 450 aa
overlap 10 20 30 40 50 60 m603.pep
LSSRRRGRNNDRKCGIRFAQRGRLKHLAPDVCXFSDDPTLKKQPQTTRRNIMSDQLILVL
|||||||||||||||||||||||||| |:: |||||| |||||||||||||||||||| a603
LSSRRRGRNNDRKCGIRFAQRGRLKHTPPNAHPFSDDPTXKKQPQTTRRNIMSDQLILVL 10 20
30 40 50 60 70 80 90 100 110 120 m603.pep
NCGSSSLKGAVIDRXSGSVVLSCLGERLTTPEAVITFNKDGNKRQVPLSGRNCHAGAVGM
|||||||||||||| ||||||||||||||||||||||:|||||||||||||||||||||| a603
NCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVITFSKDGNKRQVPLSGRNCHAGAVGM 70 80
90 100 110 120 130 140 150 160 170 180 m603.pep
LLNELEKHGLHDRIKAIGHRIAHGGEKYSESVLIDQAVMDELNACIPLAPLHNPANISGI
|||||||| |||||:|:||||||||||||||||||||||||||||||||||||||||||| a603
LLNELEKHELHDRIQAVGHRIAHGGEKYSESVLIDQAVMDELNACIPLAPLHNPANISGI 130
140 150 160 170 180 190 200 210 220 230 240 m603.pep
LAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGTSMRYVAPEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a603
LAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKYAFRRYGFHGTSMRYVAPEA 190
200 210 220 230 240 250 260 270 280 290 300 m603.pep
ARILGKPLEDIRMIIAHLGNGASITAIKNGKSVDTSMGFTPIEGLVMGTRCGDIDPGVYS |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a603
ACILGKPLEDIRMIIAHLGNGASITAIKNGKSVDTSMGFTPIEGLVMGTRCGDIDPGVYS 250
260 270 280 290 300 310 320 330 340 350 360 m603.pep
YLTSHAGMDVAQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLALEVMTYRLAK
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| a603
YLTSHAGLDVAQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLALEVMTYRLAK 310
320 330 340 350 360 370 380 390 400 410 420 m603.pep
YIASMAVGCGGVDALVFTGGIGENSRNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIIS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a603
YIASMAVGCGGVDALVFIGGIGENSRNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIIS 370
380 390 400 410 420 430 440 450 m603.pep
PTDSSPAVLVVPTNEELMIACDTAELAGILX ||||||||||||||||||||||||||:||||
a603 PTDSSPAVLVVPTNEELMIACDTAELVGILX 430 440 450
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1901>:
TABLE-US-02279 g604.seq 1 ATGCCCGAAG CGCACTTCTT TACGCGTTCC
GCCGCCTGCG GCAAGGTTGA 51 CCAGCGTACC GAGCACGGCG GCGGCGATGG
CGACCGAGGC GATGCCCATC 101 ATAGCGTGGT GCAGTTTGCC CATGCTCAGG
GCGCGTACCG GCAAATCGAT 151 GTCGGCGGCG TTTACGGTTT TGCCGCTGGA
GGCGGTGTAA TCGGCGGCGG 201 GCGCGACGAA GGCGGGTTTC GGCGTGCGCG
CGCGGGCGGC GGCTTCGGAT 251 ACGTCGCTGA TCAAACCCAT TTTCAGCGCG
CCATATGCGC GGATGGTTTC 301 AAATTTTTCC AGCGCGGCGG CATCGTTGTT
GATGTCGTCC TGCAACTCTT 351 TGCCCGTGTA GCCCAAGTCG GCGGCGTTCA
GGAAAACGGT CGGAATGCCC 401 GCGTTGATGA GCGTGGCTTT CAGACGACCT
ATATTCGGCA CATCAATTTC 451 GTCGACCAAA TTGCCGGTTG GGAACATACT
GCCTTcgcCG TCGGCTGGAT 501 CTAA
This corresponds to the amino acid sequence <SEQ ID 1902; ORF
604.ng>:
TABLE-US-02280 g604.pep 1 MPEAHFFTRS AACGKVDQRT EHGGGDGDRG
DAHHSVVQFA HAQGAYRQID 51 VGGVYGFAAG GGVIGGGRDE GGFRRARAGG
GFGYVADQTH FQRAICADGF 101 KFFQRGGIVV DVVLQLFARV AQVGGVQENG
RNARVDERGF QTTYIRHINF 151 VDQIAGWEHT AFAVGWI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1903>:
TABLE-US-02281 m604.seq 1 ATGCCCGAAG CGCACTTCTT TACGCGTTCC
GCCGCCTGCG GCAAGGTTGA 51 CCAGCGTACC GGGTACGGCG GCGGCGGTCG
CAATGGCAAC AGAGGCGGTA 101 CCCATCATCG CGTGGTGCAG TTTGCCCATG
CTCAGGGCGC GTACCAGCAA 151 ATCGATGTCG GCGGCGTTCA CGGTTTTGCC
ACTGGAGGCG GTGTAATCGG 201 CGGCGGGCGC GACGAAGGCG ACTTTCGGCG
TGTGCGCGCG AGCGGCAGCT 251 TCGGATACGT CGCTGATCAG ACCCATTTTC
AGCGCACCGT AAGCGCGGAT 301 TTTCTCGAAT TTTTCCAAAG CCGCGGCATC
GTTGTTGATG TCGTCTTGCA 351 ACTCTTTGCC TGTGTAGCCC AAGTCGGCGG
CATTCAAGAA AACGGTCGGA 401 ATGCCCGCGT TGATGAGCGT GGCTTTCAAA
CGGCCTATAT TCGGCACATC 451 AATTTCATCG ACCAAATTGC CGGTTGGGAA
CATACTGCCT TCGCCGTCGG 501 CTGGATC
This corresponds to the amino acid sequence <SEQ ID 1904; ORF
604>:
TABLE-US-02282 m604.pep 1 MPEAHFFTRS AACGKVDQRT GYGGGGRNGN
RGGTHHRVVQ FAHAQGAYQQ 51 IDVGGVHGFA TGGGVIGGGR DEGDFRRVRA
SGSFGYVADQ THFQRTVSAD 101 FLEFFQSRGI VVDVVLQLFA CVAQVGGIQE
NGRNARVDER GFQTAYIRHI 151 NFIDQIAGWE HTAFAVGWI
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 604
shows 83.4% identity over a 169 aa overlap with a predicted ORF
(ORF 604.ng) from N. gonorrhoeae:
TABLE-US-02283 m604/g604 10 20 30 40 50 60 m604.pep
MPEAHFFTRSAACGKVDQRTGYGGGGRNGNRGGTHHRVVQFAHAQGAYQQIDVGGVHGFA
|||||||||||||||||||| :||| :|:|| :|| |||||||||||:|||||||:||| g604
MPEAHFFTRSAACGKVDQRTEHGGG--DGDRGDAHHSVVQFAHAQGAYRQIDVGGVYGFA 10 20
30 40 50 70 80 90 100 110 120 m604.pep
TGGGVIGGGRDEGDFRRVRASGSFGYVADQTHFQRTVSADFLEFFQSRGIVVDVVLQLFA
:|||||||||||| |||:||:|:||||||||||||:: || ::||| |||||||||||| g604
AGGGVIGGGRDEGGFRRARAGGGFGYVADQTHFQRAICADGFKFFQRGGIVVDVVLQLFA 60 70
80 90 100 110 130 140 150 160 169 m604.pep
CVAQVGGIQENGRNARVDERGFQTAYIRHINFIDQIAGWEHTAFAVGWI
||||||:||||||||||||||||:|||||||:|||||||||||||||| g604
RVAQVGGVQENGRNARVDERGFQTTYIRHINFVDQIAGWEHTAFAVGWIX 120 130 140 150
160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1905>:
TABLE-US-02284 a604.seq 1 ATGCCCGAAG CGCACTTCTT TACGCGTTCC
GCCGCCTGCG GCAAGGTTGA 51 CCAGCGTACC GGGCACGGCG GCGGCGGTCG
CAATGGCAAC AGAGGCGGTA 101 CCCATCATCG CGTGGTGCAA TTTGCCCATG
CTCAGGGCGC GTACCAGCAA 151 ATCGATGTCG GCGGCATTCA CGGTTTTGCC
ACTGGAGGCG GTGTAATCGG 201 CGGCGGGCGC GACGAAGGCG ACTTTCGGCG
TGTGCGCGCG GGCGGCAGCT 251 TCGGATACGT CGCTGATCAG ACCCATTTTC
AGCGCACCGT AAGCGCGGAT 301 TTTCTCGAAT TTTTCCAAAG CTGCGGCATC
GTTGTTGATG TCGTCTTGCA 351 ACTCTTTGCC CGTGTAGCCC AAGTCGGCGG
CATTCAGGAA AACGGTCGGA 401 ATGCCCGCGT TGATGAGCGT GGCTTTCAAA
CGGCCTATAT TCGGCACATC 451 AATTTCATCG ACCAAATTGC CGGTTGGGAA
CATACTGCCT TCGCCGTCGG 501 CTGGATCAAG AAATTCGATT TGTACTTCGG
CTGCCGGGAA CGTTACGCCG 551 TCGAGCTCAA AATCGCCTGT TTCCAAAACT
GCGCCGTTTT GCATCGGTAC 601 ATGGGCAATA ATGGTTTTGC CGATGTTTTT
CTGCCAGATT TTGACTGTGC 651 AGATGCCGTC TGA
This corresponds to the amino acid sequence <SEQ ID 1906; ORF
604.a>:
TABLE-US-02285 a604.pep 1 MPEAHFFTRS AACGKVDQRT GHGGGGRNGN
RGGTHHRVVQ FAHAQGAYQQ 51 IDVGGIHGFA TGGGVIGGGR DEGDFRRVRA
GGSFGYVADQ THFQRTVSAD 101 FLEFFQSCGI VVDVVLQLFA RVAQVGGIQE
NGRNARVDER GFQTAYIRHI 151 NFIDQIAGWE HTAFAVGWIK KFDLYFGCRE
RYAVELKIAC FQNCAVLHRY 201 MGNNGFADVF LPDFDCADAV * m604/a604 97.0%
identity in 169 aa overlap 10 20 30 40 50 60 m604.pep
MPEAHFFTRSAACGKVDQRTGYGGGGRNGNRGGTHHRVVQFAHAQGAYQQIDVGGVHGFA
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||:|||| a604
MPEAHFFTRSAACGKVDQRTGHGGGGRNGNRGGTHHRVVQFAHAQGAYQQIDVGGIHGFA 10 20
30 40 50 60 70 80 90 100 110 120 m604.pep
TGGGVIGGGRDEGDFRRVRASGSFGYVADQTHFQRTVSADFLEFFQSRGIVVDVVLQLFA
||||||||||||||||||||:|||||||||||||||||||||||||| |||||||||||| a604
TGGGVIGGGRDEGDFRRVRAGGSFGYVADQTHFQRTVSADFLEFFQSCGIVVDVVLQLFA 70 80
90 100 110 120 130 140 150 160 169 m604.pep
CVAQVGGIQENGRNARVDERGFQTAYIRHINFIDQIAGWEHTAFAVGWI
|||||||||||||||||||||||||||||||||||||||||||||||| a604
RVAQVGGIQENGRNARVDERGFQTAYIRHINFIDQIAGWEHTAFAVGWIKKFDLYFGCRE 130
140 150 160 170 180 a604 RYAVELKIACFQNCAVLHRYMGNNGFADVFLPDFDCADAVX
190 200 210 220
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1907>:
TABLE-US-02286 g605.seq 1 ATGATGACCG AAATGCAACA ACGCGCCCAA
CTGCACCGCC AAATTTGGAA 51 AATCGCCGAC GAAGTACGCG GCGCGGTGGA
TGGCTGGGAC TTTAAACAAT 101 ACGTTCTCGG CACACTTTTC TACCGCTTTA
TCAGCGAAAA CTTCACCGAC 151 TATATGCAGG CCGGCGACAG CAGCATTGAT
TACGCCGCta tGCCGGACAG 201 CATCATCACG CCCGAAATCA AAGACGATgc
cgtcaaagtc aaAGGCTATT 251 TCATCtacCc cgGCCAGCTT TTTTgcaata
ttgccgccga agcCCATCAA 301 AACGAAGAGC TCAACACCAA GCTGAAAGAa
atCTTTACCG CGATTGAAAG 351 CTCCGCCTCC GGCTAcccgT CCGAACAAGG
CATCAAAGGC TTGTTTGACG 401 ACTTCgACAC CACCAGCAGC CGGCTCGGCA
GCACCGTTGC CGACAAAAAC 451 AAACGCCTTG CCGCCGTCCT TAAAGGCGTG
GCGGAACTCG ATTTCGGCAA 501 TTTTGAAGAC CACCGCATCG ACCTTTTCGG
TGATGCCTAC GAATACCTGA 551 TTTCCAACTA CGCcgcCAAC GCAGGCAAAT
CCGGCGGCGA ATTTTTCACC 601 CCGCAAAGCG TCTCCAAGCT GATTGCGCGG
CTGGCGGTGC ACGGGCAGGA 651 GAAAGTCAAC AAAATCTACG ACCCCGCCTG
CGGCTCGGGC AGCCTGCTCT 701 TGCAGGCGAA AAAACAGTTT GACGAACACA
TCATCGAAGA AGGCTTCTTC 751 GGGCAGGAAA TCAACCACAC CACCTACAAC
CTCGCCCGCA TGAATATGTT 801 TCTGCACAAC GTCAATTACA ACAAATTCCA
CATCGAATTG GGCGACACGC 851 TGACCAACCC CAAACTCAAA GACAGCAAAC
CCTTTGATGC CGTCGTCTCC 901 AATCCGCCCT ATTCCATCGA CTGGATAGGC
AGCGACGACC CCACCTtgaT 951 CAACGACGAC CGCTTTGCCC CCGCAGGCGT
ACTCGCACCG AAATCCAAAG 1001 CCGATTTTGC CTTCATCCTG CACGCACTGA
ACTACCTTTC CGGCAGAGGC 1051 CGCGCCGCTA TCGTCTCATT CCCCGGCATT
TTCTATCGCG GCGGCGCAGA 1101 GCAGAAAATc CGCCAATATC TGGTGGAGGG
CAACTATGTG GAAACCGTGA 1151 TTGCCCTTGC GCCCAATCTC TTTTACGGCA
CCTGCATCGC CGTCAATATC 1201 CTGGTTTTGT CCAAACACAA AGACAATACC
GACATCCAAT TCATCGACGC 1251 AAGCGGCTTC TTTAAAAAAG AAACCAACAA
CAACGTCTTA ACCGAAGAAC 1301 ACATTGCCGA AATCGTCAAA CTCTTCGCCG
ACAAAGCCGA TGTGCCGCAT 1351 ATCGCCCAAA ACGCCGCCCA GCAAACCGTC
AAAGACAACG GCTACAACCT 1401 CGCCGTCAGC AGCTATGTCG AAGCCGAAGA
CACCCGCGAG GTCATCGACA 1451 TCAGACAGCT CAACGCCGAA ATCAGCGAAA
CCgtcgCcaa AATCGAACGG 1501 CTGCGGCGTG AAATTGACGA AGTGATTGCA
GAGATTGAAA CCTAG
This corresponds to the amino acid sequence <SEQ ID 1908; ORF
605.ng>:
TABLE-US-02287 g605.pep 1 MMTEMQQRAQ LHRQIWKIAD EVRGAVDGWD
FKQYVLGTLF YRFISENFTD 51 YMQAGDSSID YAAMPDSIIT PEIKDDAVKV
KGYFIYPGQL FCNIAAEAHQ 101 NEELNTKLKE IFTAIESSAS GYPSEQGIKG
LFDDFDTTSS RLGSTVADKN 151 KRLAAVLKGV AELDFGNFED HRIDLFGDAY
EYLISNYAAN AGKSGGEFFT 201 PQSVSKLIAR LAVHGQEKVN KIYDPACGSG
SLLLQAKKQF DEHIIEEGFF 251 GQEINHTTYN LARMNMFLHN VNYNKFHIEL
GDTLTNPKLK DSKPFDAVVS 301 NPPYSIDWIG SDDPTLINDD RFAPAGVLAP
KSKADFAFIL HALNYLSGRG 351 RAAIVSFPGI FYRGGAEQKI RQYLVEGNYV
ETVIALAPNL FYGTCIAVNI 401 LVLSKHKDNT DIQFIDASGF FKKETNNNVL
TEEHIAEIVK LFADKADVPH 451 IAQNAAQQTV KDNGYNLAVS SYVEAEDTRE
VIDIRQLNAE ISETVAKIER 501 LRREIDEVIA EIET*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1909>:
TABLE-US-02288 m605.seq 1 ATGATGACCG AAATGCAACA ACGCGCCCAA
CTGCACCGCC AAATTTGGAA 51 AATTGCCGAC GAAGTACGCG GCGCGGTGGA
TGGCTGGGAC TTTAAACAAT 101 ACGTTCTCGG CACACTTTTC TACCGCTTTA
TCAGCGAAAA CTTCACCGAC 151 TATATGCAGG CAGGCGACAG CAGTATTGAT
TACGCCGCTA TGCCGGACAG 201 CATCATCACG CCCGAAATCA AAGACGATGC
CGTCAAAGTT AAAGGCTATT 251 TCATCTACCC CGGCCAGCTT TTTTGCAATA
TTGCCGCCGA AGCCCATCAA 301 AACGAAGAGC TCAACACCAA GCTGAAAGAA
ATTTTTACCG CGATTGAAAG 351 CTCCGCCTCC GGCTATCCGT CCGAACAGGA
CATCAAAGGC CTGTTTGACG 401 ACTTCGACAC CACCAGCAGC CGGCTCGGCA
GCACTGTTGC CGACAAGAAC 451 AAACGCCTTG CCGCCGTCCT CAAAGGCGTG
GCGGAACTCG ATTTCGGCAA 501 TTTTGAAAAC CACCACATCG ACCTTTTCGG
CGATGCCTAC GAATACCTGA 551 TTTCCAACTA CGCTGCCAAC GCAGGCAAAT
CCGGCGGCGA ATTTTTCACC 601 CCGCAAAGCG TATCCAAGCT GATTGCGCGG
CTGGCGGTGC ACGGACAGGA 651 GAAAGTCAAC AAAATCTACG ACCCAGCTTG
CGGCTCGGGC AGTCTGCTCT 701 TGCAGGCGAA AAAACAGTTT GACGAGCACA
TCATCGAAGA AGGCTTCTTC 751 GGGCAGGAAA TCAACCACAC CACCTACAAC
CTCGCCCGCA TGAACATGTT 801 CCTGCACAAC GTCAATTACA ACCAATTCCA
CATCGAATTG GGCGACACAC 851 TGACCAACCC AAAGCTCAAA GACAGCAAAC
CCTTTGATGC CATCGTTTCC 901 AATCCGCCTT ATTCCATCAA CTGGATAGGC
AGCGACGACC CCACCTTAAT 951 CAACGACGAC CGCTTTGCCC CCGCAGGCGT
ACTTGCCCCG AAATCCAAAG 1001 CCGATTTTGC CTTCATCCTG CACGCACTGA
ACTACCTTTC CGGCAGAGGC 1051 CGCGCCGCCA TCGTCTCATT CCCCGGCATT
TTCTATCGCG GCGGCGCAGA 1101 ACAGAAAATC CGCCAATATC TGGTGGAGGG
CAACTACGTG GAAACCGTGA 1151 TTGCCCTTGC GCCCAATCTC TTTTACGGCA
CCGGCATCGC CGTCAATATC 1201 CTGGTTTTGT CCAAACACAA AGACAATACC
GACATCCAAT TCATCGACGC 1251 AAGCGGCTTC TTTAAAAAAG AAACCAACAA
CAACGTCTTA ATCGAAGAAC 1301 ACATTGCTGA AATCGTCAAA CTCTTCGCCG
ATAAAGCCGA TGTGCCGCAT 1351 ATCGCCCAAA ACGCTGCCCA GCAAACCGTC
AAAGACAACG GCTACAACCT 1401 CGCCGTCAGC AGCTATGTCG AAGCCGAAGA
CACACGCGAA ATTATCGACA 1451 TCAAACAGCT CAACGCCGAA ATCGGCGAAA
CCGTCGCCAA AATCGAACGG 1501 CTGCGGCGTG AAATTGACGA AGTGATTGCA
GAGATTGAAG CATGA
This corresponds to the amino acid sequence <SEQ ID 1910; ORF
605>:
TABLE-US-02289 m605.pep 1 MMTEMQQRAQ LHRQIWKIAD EVRGAVDGWD
FKQYVLGTLF YRFISENFTD 51 YMQAGDSSID YAAMPDSIIT PEIKDDAVKV
KGYFIYPGQL FCNIAAEAHQ 101 NEELNTKLKE IFTAIESSAS GYPSEQDIKG
LFDDFDTTSS RLGSTVADKN 151 KRLAAVLKGV AELDFGNFEN HHIDLFGDAY
EYLISNYAAN AGKSGGEFFT 201 PQSVSKLIAR LAVHGQEKVN KIYDPACGSG
SLLLQAKKQF DEHIIEEGFF 251 GQEINHTTYN LARMNMFLHN VNYNQFHIEL
GDTLTNPKLK DSKPFDAIVS 301 NPPYSINWIG SDDPTLINDD RFAPAGVLAP
KSKADFAFIL HALNYLSGRG 351 RAAIVSFPGI FYRGGAEQKI RQYLVEGNYV
ETVIALAPNL FYGTGIAVNI 401 LVLSKHKDNT DIQFIDASGF FKKETNNNVL
IEEHIAEIVK LFADKADVPH 451 IAQNAAQQTV KDNGYNLAVS SYVEAEDTRE
IIDIKQLNAE IGETVAKIER 501 LRREIDEVIA EIEA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 605
shows 97.9% identity over a 513 aa overlap with a predicted ORF
(ORF 605.ng) from N. gonorrhoeae:
TABLE-US-02290 m605/g605 10 20 30 40 50 60 m605.pep
MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFISENFTDYMQAGDSSID
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g605
MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFISENFTDYMQAGDSSID 10 20
30 40 50 60 70 80 90 100 110 120 m605.pep
YAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNEELNTKLKEIFTAIESSAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g605
YAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNEELNTKLKEIFTAIESSAS 70 80
90 100 110 120 130 140 150 160 170 180 m605.pep
GYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGVAELDFGNFENHHIDLFGDAY ||||||
||||||||||||||||||||||||||||||||||||||||||:|:|||||||| g605
GYPSEQGIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGVAELDFGNFEDHRIDLFGDAY 130
140 150 160 170 180 190 200 210 220 230 240 m605.pep
EYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKVNKIYDPACGSGSLLLQAKKQF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g605
EYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKVNKIYDPACGSGSLLLQAKKQF 190
200 210 220 230 240 250 260 270 280 290 300 m605.pep
DEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNQFHIELGDTLTNPKLKDSKPFDAIVS
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||:|| g605
DEHIIEEGFFGQEINHITYNLARMNMFLHNVNYNKFHIELGDTLINPKLKDSKPFDAVVS 250
260 270 280 290 300 310 320 330 340 350 360 m605.pep
NPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKADFAFILHALNYLSGRGRAAIVSFPGI
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| g605
NPPYSIDWIGSDDPILINDDRFAPAGVLAPKSKADFAFILHALNYLSGRGRAAIVSFPGI 310
320 330 340 350 360 370 380 390 400 410 420 m605.pep
FYRGGAEQKIRQYLVEGNYVETVIALAPNLFYGTGIAVNILVLSKHKDNTDIQFIDASGF
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| g605
FYRGGAEQKIRQYLVEGNYVETVIALAPNLFYGTCIAVNILVLSKHKDNTDIQFIDASGF 370
380 390 400 410 420 430 440 450 460 470 480 m605.pep
FKKETNNNVLIEEHIAEIVKLFADKADVPHIAQNAAQQTVKDNGYNLAVSSYVEAEDTRE
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| g605
FKKETNNNVLTEEHIAEIVKLFADKADVPHIAQNAAQQTVKDNGYNLAVSSYVEAEDTRE 430
440 450 460 470 480 490 500 510 m605.pep
IIDIKQLNAEIGETVAKIERLRREIDEVIAEIEAX
:|||:||||||:|||||||||||||||||||||: g605
VIDIRQLNAEISETVAKIERLRREIDEVIAEIETX 490 500 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1911>:
TABLE-US-02291 a605.seq 1 ATGATGACCG AAATACAACA ACGCGCCCAA
CTGCACCGCC AAATTTGGAA 51 AATTGCCGAC GAAGTACGCG GCGCGGTGGA
TGGCTGGGAC TTCAAACAAT 101 ACGTTCTCGG CACACTTTTC TACCGCTTTA
TCAGCGAAAA CTTTACCGAC 151 TATATGCAGG CAGGCGACAG CAGTATTGAT
TACGCCGCTA TGCCGGACAG 201 CATCATCACG CCCGAAATCA AAGACGATGC
CGTCAAAGTC AAAGGCTATT 251 TCATCTACCC CGGCCAGCTT TTTTGCAATA
TTGCCGCCGA AGCCCATCAA 301 AACGAAGAGC TCAACACCAA GCTGAAAGAA
ATTTTTACCG CGATTGAAAG 351 CTCCGCCTCC GGCTATCCGT CCGAACAAGA
CATTAAAGGC CTGTTTGACG 401 ACTTCGACAC CACCAGCAGC CGGCTCGGCA
GCACCGTTGC CGACAAGAAC 451 AAACGCCTTG CCGCCGTCCT AAAAGGCGTG
GCGGAACTCG ATTTCGGCAG 501 TTTTGAAGAC CACCACATCG ACCTTTTCGG
CGATGCCTAC GAATACCTGA 551 TTTCCAACTA CGCTGCCAAC GCAGGCAAAT
CCGGCGGCGA ATTTTTCACC 601 CCGCAAAGCG TATCCAAGCT GATTGCGCGG
CTGGCGGTGC ACGGGCAGGA 651 GAAAGTAAAC AAAATCTACG ACCCAGCTTG
CGGCTCGGGC AGCCTGCTCT 701 TGCAGGCGAA AAAACAGTTT GACGAGCACA
TCATCGAAGA AGGCTTCTTC 751 GGGCAGGAAA TCAACCACAC CACCTACAAC
CTCGCCCGCA TGAATATGTT 801 TCTGCACAAC GTCAATTACA ACAAATTCCA
CATCGAATTG GGCGACACAC 851 TGACCAATCC CAAACTCAAA GACAGCAAAC
CCTTTGATGC CGTCGTTTCC 901 AATCCGCCCT ATTCCATCAA CTGGATAGGC
AGCGGCGACC CCACCTTAAT 951 CAACGACGAC CGCTTTGCCC CTGCAGGCGT
ACTCGCCCCG AAATCCAAAG 1001 CCGATTTTGC CTTCATTCTG CACGCACTGA
ACTACCTTTC CGGCAGAGGC 1051 CGCGCCGCCA TCGTCTCATT CCCCGGCATT
TTCTATCGCG GCGGCGCAGA 1101 GCAGAAAATC CGCCAATATC TGGTGGAGGG
CAACTACGTG GAAACCGTCA 1151 TCGCCCTTGC GCCCAATCTC TTTTACGGCA
CCGGCATCGC CGTCAATATA 1201 CTGGTTTTGT CCAAACACAA AGACAATACC
GACATCCAAT TCATCGACGC 1251 AGGCGGCTTC TTTAAAAAAG AAACCAACAA
CAACGTCTTA ACCGAAGAAC 1301 ACATTGCCGA AATCGTCAAA CTCTTCGCCG
ATAAAGCCGA TGTGCCGCAT 1351 ATCGCCCAAA ACGCCGCCCA GCAAACCGTC
AAAGACAACG GCTACAACCT 1401 CGCCGTCAGC AGCTATGTTG AACCCGAAGA
CACCCGCGAA ATTATCGACA 1451 TCAAACAGCT TAACGCCGAA ATCAGCGAAA
CCGTTGCCAA AATCGAACGG 1501 CTGCGGCGTG AAATTGACGA AGTGATTGCA
GAGATTGAAG CATGA
This corresponds to the amino acid sequence <SEQ ID 1912; ORF
605.a>:
TABLE-US-02292 a605.pep 1 MMTEIQQRAQ LHRQIWKIAD EVRGAVDGWD
FKQYVLGTLF YRFISENFTD 51 YMQAGDSSID YAAMPDSIIT PEIKDDAVKV
KGYFIYPGQL FCNIAAEAHQ 101 NEELNTKLKE IFTAIESSAS GYPSEQDIKG
LFDDFDTTSS RLGSTVADKN 151 KRLAAVLKGV AELDFGSFED HHIDLFGDAY
EYLISNYAAN AGKSGGEFFT 201 PQSVSKLIAR LAVHGQEKVN KIYDPACGSG
SLLLQAKKQF DEHIIEEGFF 251 GQEINHTTYN LARMNMFLHN VNYNKFHIEL
GDTLTNPKLK DSKPFDAVVS 301 NPPYSINWIG SGDPTLINDD RFAPAGVLAP
KSKADFAFIL HALNYLSGRG 351 RAAIVSFPGI FYRGGAEQKI RQYLVEGNYV
ETVIALAPNL FYGTGIAVNI 401 LVLSKHKDNT DIQFIDAGGF FKKETNNNVL
TEEHIAEIVK LFADKADVPH 451 IAQNAAQQTV KDNGYNLAVS SYVEPEDTRE
IIDIKQLNAE ISETVAKIER 501 LRREIDEVIA EIEA* m605/a605 98.1% identity
in 514 aa overlap 10 20 30 40 50 60 m605.pep
MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFISENFTDYMQAGDSSID
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| a605
MMTEIQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFISENFIDYMQAGDSSID 10 20
30 40 50 60 70 80 90 100 110 120 m605.pep
YAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNEELNTKLKEIFTAIESSAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a605
YAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNEELNTKLKEIFTAIESSAS 70 80
90 100 110 120 130 140 150 160 170 180 m605.pep
GYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGVAELDFGNFENHHIDLFGDAY
||||||||||||||||||||||||||||||||||||||||||||||:||:|||||||||| a605
GYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGVAELDFGSFEDHHIDLFGDAY 130
140 150 160 170 180 190 200 210 220 230 240 m605.pep
EYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKVNKIYDPACGSGSLLLQAKKQF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a605
EYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEKVNKIYDPACGSGSLLLQAKKQF 190
200 210 220 230 240 250 260 270 280 290 300 m605.pep
DEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNQFHIELGDTLTNPKLKDSKPFDAIVS
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||:|| a605
DEHIIEEGFFGQEINHITYNLARMNMFLHNVNYNKFHIELGDTLINPKLKDSKPFDAVVS 250
260 270 280 290 300 310 320 330 340 350 360 m605.pep
NPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKADFAFILHALNYLSGRGRAAIVSFPGI
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a605
NPPYSINWIGSGDPILINDDRFAPAGVLAPKSKADFAFILHALNYLSGRGRAAIVSFPGI 310
320 330 340 350 360 370 380 390 400 410 420 m605.pep
FYRGGAEQKIRQYLVEGNYVETVIALAPNLFYGTGIAVNILVLSKHKDNTDIQFIDASGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a605
FYRGGAEQKIRQYLVEGNYVETVIALAPNLFYGTGIAVNILVLSKHKDNTDIQFIDAGGF 370
380 390 400 410 420 430 440 450 460 470 480 m605.pep
FKKETNNNVLIEEHIAEIVKLFADKADVPHIAQNAAQQTVKDNGYNLAVSSYVEAEDTRE
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| a605
FKKETNNNVLTEEHIAEIVKLFADKADVPHIAQNAAQQTVKDNGYNLAVSSYVEPEDTRE 430
440 450 460 470 480 490 500 510 m605.pep
IIDIKQLNAEIGETVAKIERLRREIDEVIAEIEAX
|||||||||||:||||||||||||||||||||||| a605
IIDIKQLNAEISETVAKIERLRREIDEVIAEIEAX 490 500 510
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1913>:
TABLE-US-02293 g606.seq 1 ATGTCCAAAT TTATCGCCAA ACAATCGGTC
GGTGCGGAAG TCATCGACAC 51 GCCGcgCACC GAAGAAGAAG CCTGGCTTCT
GAACACTGTC GAAGCCCAAg 101 cgcGGCAATG GAATCTGAAA ACGCCAGAAG
TCGCCATCTA CCACTCCCCC 151 GAACCCAATG CCTTTGCCAC GGGCGCATCG
AGAAACAGCT CCCTGATCGC 201 CGTCAGCacc ggtttgctcg accaTAtgaC
GCGCGACgaa gtggaagccg 251 tgTTGGCGCA CGAAATGGCG CACGTCGGCA
ACGGCGACAT GGTTACGCTG 301 ACGCTGAtTC AAGGCGTGGT CAATACCTTT
GTCGTGTTCC TGTCGCGCAT 351 TATTGCCAAC CTGATTGCCC GAAACAACGA
CGGCAGCCAG TCCCAGGGAA 401 CTTATTTCCT AGTCAGCATG GTATTCCAAA
TCCTGTTCGG CTTCCTTGCC 451 AGCCTGATTG TCATGTGGTT CAGCCGCCAA
CGCGAATACC GCGCCGAcgc 501 gggCGcggCA AAACTGGTCG GCGCACCGAA
AATGATTTCC GCCCTGCAAA 551 GGCTTAAAGG CAACCCGGTC GATTTGCCCG
AAGAAATGAA CGCAATGGGC 601 ATCGCCGGAG ATACGCGCGA CTCCCTGCTC
AGCACCCACC CTTCGCTGGA 651 CAACCGAATC GCCCGCCTCA AATCGCTTTA A
This corresponds to the amino acid sequence <SEQ ID 1914;
ORF606.ng>:
TABLE-US-02294 g606.pep 1 MSKFIAKQSV GAEVIDTPRT EEEAWLLNTV
EAQARQWNLK TPEVAIYHSP 51 EPNAFATGAS RNSSLIAVST GLLDHMTRDE
VEAVLAHEMA HVGNGDMVTL 101 TLIQGVVNTF VVFLSRIIAN LIARNNDGSQ
SQGTYFLVSM VFQILFGFLA 151 SLIVMWFSRQ REYRADAGAA KLVGAPKMIS
ALQRLKGNPV DLPEEMNAMG 201 IAGDTRDSLL STHPSLDNRI ARLKSL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1915>:
TABLE-US-02295 m606.seq 1 ATGTCCAAAT TTATCGCCAA ACAATCGGTC
GGCGCGGAAG TTATCGACAC 51 GCCGCGCACC GAAGAAGAAG CCTGGCTTTT
GAACACTGTC GAAGCCCAAG 101 CGCGGCAATG GAACCTGAAA ACGCCCGAAG
TCGCCATCTA CCACTCCCCC 151 GAACCCAATG CCTTTGCCAC GGGCGCATCG
AGAAACAGCT CCCTGATCGC 201 CGTCAGCACC GGTTTGCTCG ACCATATGAC
GCGTGACGAA GTGGAAGCCG 251 TATTGGCGCA CGAAATGGCA CACGTCGGCA
ACGGCGATAT GGTTACGCTG 301 ACGCTGATTC AAGGCGTGGT CAATACCTTT
GTCGTGTTCC TGTCGCGCAT 351 TATTGCCAAC CTGATTGCCC GAAACAACGA
CGGCAGCCAG TCCCAGGGAA 401 CTTATTTCCT GGTCAGCATG GTATTCCAAA
TCCTGTTCGG CTTCCTTGCC 451 AGCTTAATTG TCATGTGGTT CAGCCGACAA
CGCGAATACC GCGCCGATGC 501 GGGCGCGGCA AAACTGGTCG GCGCGCCGAA
AATGATTTCC GCCCTGCAAA 551 GGCTCAAAGG CAACCCGGTC GATTTGCCCG
AAGAAATGAA CGCAATGGGC 601 ATCGCCGGAG ATACGCGCGA CTCCCTGCTC
AGCACCCACC CTTCGCTGGA 651 CAACCGTATC GCCCGCCTCA AATCGCTTTA A
This corresponds to the amino acid sequence <SEQ ID 1916; ORF
606>:
TABLE-US-02296 m606.pep 1 MSKFIAKQSV GAEVIDTPRT EEEAWLLNTV
EAQARQWNLK TPEVAIYHSP 51 EPNAFATGAS RNSSLIAVST GLLDHMTRDE
VEAVLAHEMA HVGNGDMVTL 101 TLIQGVVNTF VVFLSRIIAN LIARNNDGSQ
SQGTYFLVSM VFQILFGFLA 151 SLIVMWFSRQ REYRADAGAA KLVGAPKMIS
ALQRLKGNPV DLPEEMNAMG 201 IAGDTRDSLL STHPSLDNRI ARLKSL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 606
shows 100.0% identity over a 225 aa overlap with a predicted ORF
(ORF 606.ng) from N. gonorrhoeae:
TABLE-US-02297 m606/g606 10 20 30 40 50 60 m606.pep
MSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHSPEPNAFATGAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g606
MSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHSPEPNAFATGAS 10 20
30 40 50 60 70 80 90 100 110 120 m606.pep
RNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g606
RNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIAN 70 80
90 100 110 120 130 140 150 160 170 180 m606.pep
LIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRADAGAAKLVGAPKMIS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g606
LIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRADAGAAKLVGAPKMIS 130
140 150 160 170 180 190 200 210 220 m606.pep
ALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSLX
||||||||||||||||||||||||||||||||||||||||||||||| g606
ALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSLX 190 200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1917>:
TABLE-US-02298 a606.seq 1 ATGTCCAAAT TCATCGCCAA ACAATCGGTC
GGCGCGGAAG TTATCGACAC 51 GCCGCGCACC GAAGAAGAAG CCTGGCTTTT
GAACACTGTC GAAGCCCAAG 101 CGCGGCAATG GAACCTGAAA ACGCCCGAAG
TCGCCATCTA CCACTCCCCC 151 GAACCCAATG CCTTTGCCAC GGGCGCATCG
AGAAACAGCT CCCTGATCGC 201 CGTCAGCACC GGTTTGCTCG ACCATATGAC
GCGTGACGAA GTGGAAGCCG 251 TATTGGCGCA CGAAATGGCA CACGTCGGCA
ACGGCGATAT GGTTACGCTG 301 ACGCTGATTC AAGGCGTGGT CAATACCTTT
GTCGTGTTCC TGTCGCGCAT 351 TATTGCCAAC CTGATTGCCC GAAACAACGA
CGGCAGCCAG TCCCAGGGAA 401 CTTATTTCCT GGTCAGCATG GTATTCCAAA
TCCTGTTCGG CTTCCTTGCC 451 AGCTTAATTG TCATGTGGTT CAGCCGACAA
CGCGAATACC GCGCCGACGC 501 GGGCGCGGCA AAACTGGTCG GCGCGCCGAA
AATGATTTCC GCCCTGCAAA 551 GGCTTAAAGG CAACCCGGTC GATTTGCCCG
AAGAAATGAA CGCAATGGGC 601 ATCGCCGGAG ATACGCGCGA CTCCCTGCTC
AGCACCCACC CTTCGCTGGA 651 CAACCGAATC GCCCGCCTCA AATCGCTTTA A
This corresponds to the amino acid sequence <SEQ ID 1918; ORF
606.a>:
TABLE-US-02299 a606.pep 1 MSKFIAKQSV GAEVIDTPRT EEEAWLLNTV
EAQARQWNLK TPEVAIYHSP 51 EPNAFATGAS RNSSLIAVST GLLDHMTRDE
VEAVLAHEMA HVGNGDMVTL 101 TLIQGVVNTF VVFLSRIIAN LIARNNDGSQ
SQGTYFLVSM VFQILFGFLA 151 SLIVMWFSRQ REYRADAGAA KLVGAPKMIS
ALQRLKGNPV DLPEEMNAMG 201 IAGDTRDSLL STHPSLDNRI ARLKSL* m606/a606
100.0% identity in 226 aa overlap 10 20 30 40 50 60 m606.pep
MSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHSPEPNAFATGAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a606
MSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHSPEPNAFATGAS 10 20
30 40 50 60 70 80 90 100 110 120 m606.pep
RNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a606
RNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVVNTFVVFLSRIIAN 70 80
90 100 110 120 130 140 150 160 170 180 m606.pep
LIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRADAGAAKLVGAPKMIS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a606
LIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRADAGAAKLVGAPKMIS 130
140 150 160 170 180 190 200 210 220 m606.pep
ALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSLX
||||||||||||||||||||||||||||||||||||||||||||||| a606
ALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARLKSLX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1919>:
TABLE-US-02300 g607.seq 1 ATGCTGCTCG accTcgaCCG CTTTTCCTtt
tccGTCTTCC TGAAAGAAAT 51 CCGCCTGCTG ACCGCCCTTG CCCTGCCCAT
GCTGTTGGCG CAGGTCGCGC 101 AGGTGGGCAT CGGTTTCGTC GATACCGTGA
TGGCGGGCGG TGCGGGCAAG 151 GAAGATTTGG CGGCGGTGGC TTTGGGCAGC
AGCGCGTTTG CCACGGTTTA 201 TATTACCTTT ATGGGCATTA TGGCGGCGCT
GAACCCGATG ATTGCCCAGC 251 TTTACGGCGC GGGTAAAACC GgtgAAGCAG
GCGAAACGGG GCGGCAGGGG 301 ATTTGGTTCG GGCTGATTTT GGGGATTTTC
GGCATGATTT TGATGTGGGC 351 GGCGATTACG CCGTTCCGCA ACTGGCTGAC
TTTGAGCGAT TATGTGGAAG 401 gcacAAtggc gcAGTATATG CTGTTCACCA
GCTTGGCGAT GCCGGCGGCA 451 ATGGTACACC GCGCACTGCA CGCCTACGCT
TCCAGCCTGA ACCGCCCGCG 501 CCTGATTATG TTGGTCAGCT TTGCGGCGTT
TGTGTTGAAC GTGCCGCTGA 551 ACTATATTTT CGTTTACGGC AAATTCGGTA
TGCCCGCTTT GGGTGGCGCA 601 GGTTGCGGCG TGGCGACAAT GGCGGTGTTT
TGGTTCAGCG CGCTGGCATT 651 GTGGATTTAT ATCGCCAAGG AAAAATTCTT
CCGCCCGTTC GGACTGACAG 701 CGAAATTCGg caaACCGGat tGGgcGGTGT
TCAAACAGAT TtGGAAAATC 751 gGcgcgCCCA TCGGGCTGTC TTATTTTTTG
GAAgccaGcg cGTTTTCGTT 801 TATCGTGTTT TTGATTGCGC CTttcggCGA
GGATTATGTG GCGGCGCAGC 851 AGGTCGGCAT CAGTTTGTCG GGGATTCTCT
ATATGATTCC GCAAAGCGTC 901 GGCTCGGCAG GGACGGTGCG CATCGGCTTT
TCGCTTGGGC GGCGCGAATT 951 TTCGCGGGCG CGTTATATTT CAGGAGTGTC
GCTGGTGTCG GGCTGGGTGC 1001 TCGCCGTGAT TACCGTGCTT TCCTTGGTAT
TATTCCGTTC GCCGCTGGCA 1051 AGCATGTACA ACGATGaTCC GGCAGTTTTA
AGCATCGCCT CCACCGTCCT 1101 GCTGTTCGCC GGCCTGTtcc aACCGGCAGA
CTTCACCCAA TGTATCGCGT 1151 CCTATGCCCT GCGCGGCTAC AAAGTCACCA
AGGTGCCGAT GTTCATCCAC 1201 GCCGCCGCCT TCTGGGGCTG CGGCCTGCTG
CCGGGCTATC TGCTCGCCTA 1251 CCGTTTCGAT ATGGGCATTT ACGGCTTCTG
GACGGCATTG ATTGCCTCGC 1301 TCACCATCGC AGCCGTCGCC TTGGTGTGGT
GCTTGGAAAA ATACAGTATG 1351 GAGTTGGTCA AATCACACAA GGCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 1920; ORF
607.ng>:
TABLE-US-02301 g607.pep 1 MLLDLDRFSF SVFLKEIRLL TALALPMLLA
QVAQVGIGFV DTVMAGGAGK 51 EDLAAVALGS SAFATVYITF MGIMAALNPM
IAQLYGAGKT GEAGETGRQG 101 IWFGLILGIF GMILMWAAIT PFRNWLTLSD
YVEGTMAQYM LFTSLAMPAA 151 MVHRALHAYA SSLNRPRLIM LVSFAAFVLN
VPLNYIFVYG KFGMPALGGA 201 GCGVATMAVF WFSALALWIY IAKEKFFRPF
GLTAKFGKPD WAVFKQIWKI 251 GAPIGLSYFL EASAFSFIVF LIAPFGEDYV
AAQQVGISLS GILYMIPQSV 301 GSAGTVRIGF SLGRREFSRA RYISGVSLVS
GWVLAVITVL SLVLFRSPLA 351 SMYNDDPAVL SIASTVLLFA GLFQPADFTQ
CIASYALRGY KVTKVPMFIH 401 AAAFWGCGLL PGYLLAYRFD MGIYGFWTAL
IASLTIAAVA LVWCLEKYSM 451 ELVKSHKAV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1921>:
TABLE-US-02302 m607.seq 1 ATGCTGCTCG ACCTCAACCG CTTTTCCTTT
CCCGTCTTCC TGAAAGAAGT 51 CCGCCTGCTG ACCACTCTTG CCCTGCCCAT
GCTGTTGGCG CAGGTCGCGC 101 AGGTGGGCAT CGGTTTTGTC GATACTGTGA
TGGCGGGCGG TGCGGGCAAG 151 GAAGACTTGG CGGCGGTGGC TTTGGGCAGC
AGCGCGTTTG CCACGGTTTA 201 TATTACCTTT ATGGGCATTA TGGCGGCGCT
GAACCCGATG ATTGCCCAGC 251 TTTACGGCGC GGGTAAAACC GACGAAGTGG
GCGAAACGGG GCGGCAGGGG 301 ATTTGGTTCG GGCTGTTTTT GGGCGTGTTC
GGCATGGTCT TGATGTGGGC 351 GGCGATTACG CCGTTCCGCA ACTGGCTGAC
CTTGAGCGAT TATGTGGAAG 401 GCACGATGGC GCAGTATATG TTGTTCACCA
GCTTGGCGAT GCCGGCGGCA 451 ATGGTACACC GCGCGCTGCA CGCCTACACT
TCCAGCCTGA ACCGCCCGCG 501 CCTGATTATG TTGGTCAGCT TTGCGGCGTT
TGTGTTGAAC GTGCCGCTGA 551 ACTATATTTT CGTTTACGGC AAATTCGGTA
TGCCCGCTTT GGGCGGCGCA 601 GGCTGCGGAC TGGCGACGAT GGCGGTGTTT
TGGTTCAGCG CGCTGGCATT 651 GTGGATTTAT ATCGCCAAGG AAAATTTCTT
CCGCCCATTC GGACTGACGG 701 CGAAATTCGG CAAACCGGAT TGGGCGGTGT
TCAAACAGAT TTGGAAAATC 751 GGCGCACCCA TCGGGCTGTC TTATTTTTTG
GAAGCCAGCG CGTTTTCGTT 801 TATCGTGTTT TTGATTGCGC CTTTCGGCGA
GGATTATGTG GCGGCGCAGC 851 AGGTCGGCAT CAGTTTGTCG GGGATTCTCT
ATATGATTCC GCAAAGCGTC 901 GGCTCGGCGG GGACGGTGCG CATCGGCTTT
TCGCTTGGGC GGCGCGAATT 951 TTCGCGGGCG CGTTATATTT CGGGCGTGTC
ACTGGTGTTA GGATGGATGC 1001 TCGCCGTGAT TACCGTGCTT TCCTTGGTAT
TATTCCGTTC GCCGCTGGTA 1051 AGTATGTACA ACAATGATCC GGCGGTTTTA
AGCATCGCCG CCACCGTCTT 1101 ACTGTTCGCC GGCTTGTTCC AACCGGCAGA
CTTCACCCAA TGTATCGCCT 1151 CCTACGCCTT GCGCGGCTAC AAAGTTACAA
AGGTGCCGAT GTTCATCCAC 1201 GCCGCCGCCT TTTGGGGCTG CGGCCTGCTG
CCGGGCTATC TGCTCGCCTA 1251 CCGTTTCAAT ATGGGCATTT ACGGCTTCTG
GACGGCATTG ATTGCCTCGC 1301 TCACCATCGC CGCCATCGCC TTGGTGTGGT
GCTTGGAATT GTGCAGTAGG 1351 GAGATGGTCA GATCGCATAA GGCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 1922; ORF
607>:
TABLE-US-02303 m607.pep 1 MLLDLNRFSF PVFLKEVRLL TTLALPMLLA
QVAQVGIGFV DTVMAGGAGK 51 EDLAAVALGS SAFATVYITF MGIMAALNPM
IAQLYGAGKT DEVGETGRQG 101 IWFGLFLGVF GMVLMWAAIT PFRNWLTLSD
YVEGTMAQYM LFTSLAMPAA 151 MVHRALHAYT SSLNRPRLIM LVSFAAFVLN
VPLNYIFVYG KFGMPALGGA 201 GCGLATMAVF WFSALALWIY IAKENFFRPF
GLTAKFGKPD WAVFKQIWKI 251 GAPIGLSYFL EASAFSFIVF LIAPFGEDYV
AAQQVGISLS GILYMIPQSV 301 GSAGTVRIGF SLGRREFSRA RYISGVSLVL
GWMLAVITVL SLVLFRSPLV 351 SMYNNDPAVL SIAATVLLFA GLFQPADFTQ
CIASYALRGY KVTKVPMFIH 401 AAAFWGCGLL PGYLLAYRFN MGIYGFWTAL
IASLTIAAIA LVWCLELCSR 451 EMVRSHKAV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 607
shows 94.8% identity over a 459 aa overlap with a predicted ORF
(ORF 607.ng) from N. gonorrhoeae:
TABLE-US-02304 m607/g607 10 20 30 40 50 60 m607.pep
MLLDLNRFSFPVFLKEVRLLTTLALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS
|||||:|||| |||||:||||:|||||||||||||||||||||||||||||||||||||| g607
MLLDLDRFSFSVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS 10 20
30 40 50 60 70 80 90 100 110 120 m607.pep
SAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIWFGLFLGVFGMVLMWAAIT
|||||||||||||||||||||||||||||| |:||||||||||||:||:|||:||||||| g607
SAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIWFGLILGIFGMILMWAAIT 70 80
90 100 110 120 130 140 150 160 170 180 m607.pep
PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYTSSLNRPRLIMLVSFAAFVLN
|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||| g607
PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLN 130
140 150 160 170 180 190 200 210 220 230 240 m607.pep
VPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALWIYIAKENFFRPFGLTAKFGKPD
|||||||||||||||||||||||:||||||||||||||||||||:||||||||||||||| g607
VPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALWIYIAKEKFFRPFGLTAKFGKPD 190
200 210 220 230 240 250 260 270 280 290 300 m607.pep
WAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g607
WAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV 250
260 270 280 290 300 310 320 330 340 350 360 m607.pep
GSAGTVRIGFSLGRREFSRARYISGVSLVLGWMLAVITVLSLVLFRSPLVSMYNNDPAVL
||||||||||||||||||||||||||||| ||:||||||||||||||||:||||:||||| g607
GSAGIVRIGFSLGRREFSRARYISGVSLVSGWVLAVITVLSLVLFRSPLASMYNDDPAVL 310
320 330 340 350 360 370 380 390 400 410 420 m607.pep
SIAATVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFN
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||: g607
SIASTVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFD 370
380 390 400 410 420 430 440 450 460 m607.pep
MGIYGFWTALIASLTIAAIALVWCLELCSREMVRSHKAVX ||||||||||||||||||:|||||||
| |:|:|||||| g607 MGIYGFWTALIASLTIAAVALVWCLEKYSMELVKSHKAVX 430 440
450 460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1923>:
TABLE-US-02305 a607.seq 1 ATGCTGCTCG ACCTCAACCG CTTTTCCTTT
TCCGTCTTCC TGAAAGAAGT 51 CCGCCTGCTG ACCGCTCTTG CCCTGCCCAT
GCTGTTGGCG CAGGTCGCGC 101 AGGTGGGCAT CGGTTTTGTC GATACCGTGA
TGGCGGGCGG TGCGGGCAAG 151 GAAGACTTGG CGGCGGTGGC TTTGGGCAGC
AGCGCGTTTG CCACGGTTTA 201 TATTACCTTT ATGGGCATTA TGGCGGCGCT
GAACCCGATG ATTGCCCAGC 251 TTTACGGCGC GGGTAAAACC GACGAAGTGG
GCGAAACGGG ACGGCAGGGG 301 ATTTGGTTCG GGCTGTTTTT GGGCGTGTTC
GGCATGGTCT TGATGTGGGC 351 GGCGATTACG CCGTTCCGCA ACTGGCTGAC
CTTGAGCGAT TATGTGGAAG 401 GCACAATGGC GCAGTATATG CTGTTCACCA
GCTTGGCGAT GCCGGCGGCA 451 ATGGTACACC GCGCACTGCA CGCCTACGCC
TCCAGCCTGA ACCGCCCGCG 501 CCTGATTATG TTGGTCAGCT TTGCGGCGTT
TGTGTTGAAC GTGCCGCTGA 551 ACTATATTTT CGTTTACGGC AAATTCGGTA
TGCCCGCTTT GGGCGGCGCA 601 GGCTGCGGAC TGGCGACGAT GGCGGTGTTT
TGGTTCAGCG CGCTGGCATT 651 GTGGATTTAT ATCGCCAAGG AAAATTTCTT
CCGCCCATTC GGACTGACGG 701 CGAAATTCGG CAAACCGGAT TGGGCGGTGT
TCAAACAGAT TTGGAAAATC 751 GGCGCACCCA TCGGGCTGTC TTATTTTTTG
GAAGCCAGCG CGTTTTCGTT 801 TATCGTGTTT TTGATTGCGC CTTTCGGCGA
GGATTATGTG GCGGCGCAGC 851 AGGTCGGCAT CAGTTTGTCG GGGATTCTCT
ATATGATTCC GCAAAGCGTC 901 GGCTCGGCGG GGACGGTGCG CATCGGCTTT
TCGCTTGGGC GGCGCGAATT 951 TTCGCGGGCG CGTTATATTT CGGGCGTGTC
ACTGGTGTCA GGATGGATGC 1001 TCGCCGTGAT TACCGTGCTT TCCTTGGTAT
TATTCCGTTC GCCGCTGGTA 1051 AGTATGTACA ACAATGATCC GGCGGTTTTA
AGCATCGCCG CCACCGTCTT 1101 ACTGTTCGCC GGCTTGTTCC AACCGGCAGA
CTTCACCCAA TGTATCGCCT 1151 CCTACGCCTT GCGCGGCTAC AAAGTTACAA
AGGTGCCGAT GTTCATCCAC 1201 GCCGCCGCCT TTTGGGGCTG CGGTCTGCTG
CCGGGCTACC TGCTCGCCTA 1251 CCGTTTCGAT ATGGGCATTT ACGGCTTCTG
GACGGCATTG ATTGCCTCGC 1301 TCACCATCGC CGCCATCGCC TTGGTGTGGT
GCTTGGAATT GTGCAGTAGG 1351 GAGATGGTCA GATCGCATAA GGCTGTCTGA
This corresponds to the amino acid sequence <SEQ ID 1924; ORF
607.a>:
TABLE-US-02306 a607.pep 1 MLLDLNRFSF SVFLKEVRLL TALALPMLLA
QVAQVGIGFV DTVMAGGAGK 51 EDLAAVALGS SAFATVYITF MGIMAALNPM
IAQLYGAGKT DEVGETGRQG 101 IWFGLFLGVF GMVLMWAAIT PFRNWLTLSD
YVEGTMAQYM LFTSLAMPAA 151 MVHRALHAYA SSLNRPRLIM LVSFAAFVLN
VPLNYIFVYG KFGMPALGGA 201 GCGLATMAVF WFSALALWIY IAKENFFRPF
GLTAKFGKPD WAVFKQIWKI 251 GAPIGLSYFL EASAFSFIVF LIAPFGEDYV
AAQQVGISLS GILYMIPQSV 301 GSAGTVRIGF SLGRREFSRA RYISGVSLVS
GWMLAVITVL SLVLFRSPLV 351 SMYNNDPAVL SIAATVLLFA GLFQPADFTQ
CIASYALRGY KVTKVPMFIH 401 AAAFWGCGLL PGYLLAYRFD MGIYGFWTAL
IASLTIAAIA LVWCLELCSR 451 EMVRSHKAV* m607/a607 98.9% identity in
459 aa overlap 10 20 30 40 50 60 m607.pep
MLLDLNRFSFPVFLKEVRLLTTLALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS
|||||||||| ||||||||||:|||||||||||||||||||||||||||||||||||||| a607
MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS 10 20
30 40 50 60 70 80 90 100 110 120 m607.pep
SAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIWFGLFLGVFGMVLMWAAIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a607
SAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIWFGLFLGVFGMVLMWAAIT 70 80
90 100 110 120 130 140 150 160 170 180 m607.pep
PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYTSSLNRPRLIMLVSFAAFVLN
|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||| a607
PFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLN 130
140 150 160 170 180 190 200 210 220 230 240 m607.pep
VPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALWIYIAKENFFRPFGLTAKFGKPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a607
VPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALWIYIAKENFFRPFGLTAKFGKPD 190
200 210 220 230 240 250 260 270 280 290 300 m607.pep
WAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a607
WAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFGEDYVAAQQVGISLSGILYMIPQSV 250
260 270 280 290 300 310 320 330 340 350 360 m607.pep
GSAGTVRIGFSLGRREFSRARYISGVSLVLGWMLAVITVLSLVLFRSPLVSMYNNDPAVL
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| a607
GSAGTVRIGFSLGRREFSRARYISGVSLVSGWMLAVITVLSLVLFRSPLVSMYNNDPAVL 310
320 330 340 350 360 370 380 390 400 410 420 m607.pep
SIAATVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a607
SIAATVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFD 370
380 390 400 410 420 430 440 450 460 m607.pep
MGIYGFWTALIASLTIAAIALVWCLELCSREMVRSHKAVX
|||||||||||||||||||||||||||||||||||||||| a607
MGIYGFWTALIASLTIAAIALVWCLELCSREMVRSHKAVX 430 440 450 460
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 1925>:
TABLE-US-02307 g608.seq 1 ATGTCCGCCC TCCTCCCCAT CATCAACCGC
CTGATTCTGC AAAGCCCGGA 51 CAGCCGCTCG GAACTTACCT CCTTTGCAGG
CAAAACACTG ACCCTGAACA 101 TTGCCGGGCT GAAACTGGCG GGACGCATCA
CAGAAGACGG TTTGCTCTCG 151 GCGGGAAACG GCTTTGCAGA CACCGAAATT
ACCTTCCGCA ACAGCGCGAT 201 ACGGAAAATC CTCCAAGGCG GCGAACCCGG
GGCTGGCGAC ATCAGGCTCG 251 AAGGCGACCT CATCCTCGGC ATcGCGGTAC
TGTCCCTGCT CGGCAGCCTG 301 CGTTCCCGCG CATCGGacgA ATTGGCACGG
ATTTTCGGCA CGCAGGCAGg 351 catcggcagc CGTGCCACCG ACATCGGACA
CGGCaTCaaa cAAATCGGCA 401 GGAACATCGC CGAACAAATC GGCGGATTTT
CCCGCGAACC CGAGTCcgCa 451 aacaccggca acgaagccct tgccgactgc
ctCGACGAAA TAAGCAGACT 501 GCGCGACGGC GTGGAACGCC TCAACGAACG
CCTCGACAGG CTCGAACGCG 551 ACATTTGGAT AGACTAA
This corresponds to the amino acid sequence <SEQ ID 1926; ORF
608.ng>:
TABLE-US-02308 g608.pep 1 MSALLPIINR LILQSPDSRS ELTSFAGKTL
TLNIAGLKLA GRITEDGLLS 51 AGNGFADTEI TFRNSAIRKI LQGGEPGAGD
IRLEGDLILG IAVLSLLGSL 101 RSRASDELAR IFGTQAGIGS RATDIGHGIK
QIGRNIAEQI GGFSREPESA 151 NTGNEALADC LDEISRLRDG VERLNERLDR
LERDIWID*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1927>:
TABLE-US-02309 m608.seq 1 ATGTCCGCCC TCCTCCCCAT CATCAACCGC
CTGATTCTGC AAAGCCCGGA 51 CAGCCGCTCG GAACTTGCCG CCTTTGCAGG
CAAAACACTG ACCCTGAACA 101 TTGCCGGGCT GAAACTGGCG GGACGCATCA
CGGAAGACGG TTTGCTCTCG 151 GCGGGAAACG GCTTTGCAGA CACCGAAATT
ACCTTCCGCA ACAGCGCGGT 201 ACAGAAAATC CTCCAAGGAG GCGAACCCGG
GGCGGGCGAC ATCGGGCTCG 251 AAGGCGACCT CATCCTCGGC ATCGCGGTAC
TGTCCCTGCT CGGCAGCCTG 301 CGTTCCCGCG CATCGGACGA ATTGGCACGG
ATTTTCGGCA CGCAGGCAGA 351 CATCGGCAGC CGTGCCGCCG ACATCGGACA
CGGCATCAAA CAAATCGGCA 401 GGAACATCGC CGAACAAATC GGCGGATTTT
CCCGCGAATC CGAGTCCGCA 451 AACATCGGCA ACGAAGCCCT TGCCGACTGC
CTCGACGAAA TAAGCAGACT 501 GCGCGACGGC GTGGAACGCC TCAACGAACG
CCTCGACCGG CTCGAACGCG 551 ACATTTGGAT AGACTAA
This corresponds to the amino acid sequence <SEQ ID 1928; ORF
608>:
TABLE-US-02310 m608.pep 1 MSALLPIINR LILQSPDSRS ELAAFAGKTL
TLNIAGLKLA GRITEDGLLS 51 AGNGFADTEI TFRNSAVQKI LQGGEPGAGD
IGLEGDLILG IAVLSLLGSL 101 RSRASDELAR IFGTQADIGS RAADIGHGIK
QIGRNIAEQI GGFSRESESA 151 NIGNEALADC LDEISRLRDG VERLNERLDR
LERDIWID*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 608
shows 95.2% identity over a 188 aa overlap with a predicted ORF
(ORF 608.ng) from N. gonorrhoeae:
TABLE-US-02311 m608/g608 10 20 30 40 50 60 m608.pep
MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRITEDGLLSAGNGFADTEI
||||||||||||||||||||||::|||||||||||||||||||||||||||||||||||| g608
MSALLPIINRLILQSPDSRSELTSFAGKILTLNIAGLKLAGRITEDGLLSAGNGFADTEI 10 20
30 40 50 60 70 80 90 100 110 120 m608.pep
TFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRSRASDELARIFGTQADIGS
||||||::||||||||||||| |||||||||||||||||||||||||||||||||| ||| g608
TFRNSAIRKILQGGEPGAGDIRLEGDLILGIAVLSLLGSLRSRASDELARIFGTQAGIGS 70 80
90 100 110 120 130 140 150 160 170 180 m608.pep
RAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADCLDEISRLRDGVERLNERLDR
||:||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| g608
RATDIGHGIKQIGRNIAEQIGGFSREPESANIGNEALADCLDEISRLRDGVERLNERLDR 130
140 150 160 170 180 189 m608.pep LERDIWIDX ||||||||| g608
LERDIWIDX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1929>:
TABLE-US-02312 a608.seq 1 ATGTCCGCCC TCCTCCCCAT CATCAACCGC
CTGATTCTGC AAAGCCCGGA 51 CAGCCGCTCG GAACTTGCCG CCTTCGCAGG
CAAAACACTG ACCCTGAACA 101 TTGCCGGGTT GAAACTGGCG GGACGCATCA
CGGAAGACGG TTTGCTCTCG 151 GCGGGAAACG GCTTTGCAGA CACCGAAATC
ACCTTCCGCA ACAGCGCGGT 201 ACAGAAAATC CTCCAAGGCG GCGAACCCGG
GGCGGGCGAC ATCGGGCTCG 251 AAGGCGACCT CATCCTCGGC ATCGCGGTAC
TGTCCCTGCT CGGCAGCCTG 301 CGTTCCCGCG CATCGGACGA ATTGGCACGG
ATTTTCGGCA CGCAGGCAGA 351 CATCGGCAGC CGTGCCGCCG ACATCGGACA
CGGCATCAAA CAAATCGGCA 401 GGAACATCGC CGAACAAATC GGCAGATTTT
CCCGCGAACC CGAGTCCGCA 451 AACATCGGCA ACGAAGCCCT TGCCGACTGC
CTCGACGAAA TAAGCAGACT 501 GCGCGACGGC GTGGAACGCC TCAACGAACG
CCTCGACCGG CTCGAACGCG 551 ACATTTGGAT AGACTAA
This corresponds to the amino acid sequence <SEQ ID 1930; ORF
608.a>:
TABLE-US-02313 a608.pep 1 MSALLPIINR LILQSPDSRS ELAAFAGKTL
TLNIAGLKLA GRITEDGLLS 51 AGNGFADTEI TFRNSAVQKI LQGGEPGAGD
IGLEGDLILG IAVLSLLGSL 101 RSRASDELAR IFGTQADIGS RAADIGHGIK
QIGRNIAEQI GRFSREPESA 151 NIGNEALADC LDEISRLRDG VERLNERLDR
LERDIWID* m608/a608 98.9% identity in 188 aa overlap 10 20 30 40 50
60 m608.pep
MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRITEDGLLSAGNGFADTEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a608
MSALLPIINRLILQSPDSRSELAAFAGKILTLNIAGLKLAGRITEDGLLSAGNGFADTEI 10 20
30 40 50 60 70 80 90 100 110 120 m608.pep
TFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRSRASDELARIFGTQADIGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a608
TFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRSRASDELARIFGTQADIGS 70 80
90 100 110 120 130 140 150 160 170 180 m608.pep
RAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADCLDEISRLRDGVERLNERLDR
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| a608
RAADIGHGIKQIGRNIAEQIGRFSREPESANIGNEALADCLDEISRLRDGVERLNERLDR 130
140 150 160 170 180 189 m608.pep LERDIWIDX ||||||||| a608
LERDIWIDX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1931>:
TABLE-US-02314 g609.seq 1 ATGGTTGTGG ATAGACTCGA AATTCTCGCT
CTCGACGACG AAACTCTTGA 51 TGCGTTTGTC GGCAATCAGC GAAGTAGCGA
CATCGCGCAC CATATCTTCC 101 ACGAATTTCG GGTTTTCGTA GGCCTTTTCG
GTAACGTATT TTTCATCGGG 151 GCGTTTGAGC AGGCCGTAGA GTTGGCAGCT
CGCCTGCGTT TCCACATAAT 201 CGATAACTTC CTCGATACCG ACTTCGGCAT
CGGAAGTCAG GCTGACGGTA 251 ACGTGCGAAC GCTGATTATG CGCGCCATAT
TGGGAAATTT CTTTGGAACA 301 CGGGCAAAGC GAGGTTACGG GAATCATGAC
CTTCATACTG TGGCCGTATG 351 CCCCGTCTTT CATTTCACCC GTGAGGCTGA
CATCATAATC CAGtaa
This corresponds to the amino acid sequence <SEQ ID 1932; ORF
609.ng>:
TABLE-US-02315 g609.pep 1 MVVDRLEILA LDDETLDAFV GNQRSSDIAH
HIFHEFRVFV GLFGNVFFIG 51 AFEQAVELAA RLRFHIIDNF LDTDFGIGSQ
ADGNVRTLIM RAILGNFFGT 101 RAKRGYGNHD LHTVAVCPVF HFTREADIII Q*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1933>:
TABLE-US-02316 m609.seq 1 ATGGTTGTGG ATAGACTCGA AATTCTCGCT
CTCGACGACG AAACTCTTGA 51 TGCGTTTGTC GGCAATCAGC GAAGTAGCGA
CATCGCGCAC CATATCTTCC 101 ACGAATTTCG GGTTTTCGTA GGCTTTTTCG
GTAACGTATT TTTCATCGGG 151 GCGTTTGAGC AGGCCGTAGA GTTGGCAGCT
CGCCTGCGCC TCCACATAAT 201 CGATGACTTC CTCGATACCG ACTTCGGCAT
CGGCAGTCAG GCTGACGGTA 251 ACGTGCGAAC GCTGGTTGTG CGCGCCGTAT
TGGGAAATTT CTTTGGAACA 301 CGGGCAAAGC GAGGTTACGG GAATCATGAC
CTTCATACTG TGGCCGTATG 351 CCCCGTCTTT GATTTCGCCC GTGAGACAGA
CATCATAATC CAGTAA
This corresponds to the amino acid sequence <SEQ ID 1934; ORF
609>:
TABLE-US-02317 m609.pep 1 MVVDRLEILA LDDETLDAFV GNQRSSDIAH
HIFHEFRVFV GFFGNVFFIG 51 AFEQAVELAA RLRLHIIDDF LDTDFGIGSQ
ADGNVRTLVV RAVLGNFFGT 101 RAKRGYGNHD LHTVAVCPVF DFARETDIII Q*
m609/g609 93.1% identity in 131 aa overlap 10 20 30 40 50 60
m609.pep
MVVDRLEILALDDETLDAFVGNQRSSDIAHHIFHEFRVFVGFFGNVFFIGAFEQAVELAA
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| g609
MVVDRLEILALDDETLDAFVGNQRSSDIAHHIFHEFRVFVGLFGNVFFIGAFEQAVELAA 10 20
30 40 50 60 70 80 90 100 110 120 m609.pep
RLRLHIIDDFLDTDFGIGSQADGNVRTLVVRAVLGNFFGTRAKRGYGNHDLHTVAVCPVF
|||:||||:|||||||||||||||||||::||:||||||||||||||||||||||||||| g609
RLRFHIIDNFLDTDFGIGSQADGNVRTLIMRAILGNFFGTRAKRGYGNHDLHTVAVCPVF 70 80
90 100 110 120 130 m609.pep DFARETDIIIQX |:||:|||||| g609
HFTREADIIIQX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1935>:
TABLE-US-02318 a609.seq 1 ATGGTTGTGG ATAGACTCGA AATTCTCGCT
CTCGACGACG AAACTCTTGA 51 TGCGTTTGTC GGCAATCAGC GAAGTAGCGA
CATCGCGCAC CATATCTTCC 101 ACGAATTTCG GGTTTTCGTA GGCTTTTTCG
GTAACGTATT TTTCATCGGG 151 GCGTTTGAGC AGGCCGTAGA GTTGGCAGCT
CGCCTGCGCC TCCACATAAT 201 CGATGACTTC CTCGATACCG ACTTCGGCAT
CGGCAGTCAG GCTGACGGTA 251 ACGTGCGAAC GCTGGTTGTG CGCGCCATAT
TGGGAAATTT CTTTGGAACA 301 CGGGCAAAGC GAGGTTACGG GAATCATGAC
CTTCATACTG TGGCCGTATG 351 CACCGTCTTT CATTTCGCCC GTGAGGCTGA
CATCATAATC CAGTAA
This corresponds to the amino acid sequence <SEQ ID 1936; ORF
609.a>:
TABLE-US-02319 a609.pep 1 MVVDRLEILA LDDETLDAFV GNQRSSDIAH
HIFHEFRVFV GFFGNVFFIG 51 AFEQAVELAA RLRLHIIDDF LDTDFGIGSQ
ADGNVRTLVV RAILGNFFGT 101 RAKRGYGNHD LHTVAVCTVF HFAREADIII Q*
m609/a609 96.9% identity in 131 aa overlap 10 20 30 40 50 60
m609.pep
MVVDRLEILALDDETLDAFVGNQRSSDIAHHIFHEFRVFVGFFGNVFFIGAFEQAVELAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a609
MVVDRLEILALDDETLDAFVGNQRSSDIAHHIFHEFRVFVGFFGNVFFIGAFEQAVELAA 10 20
30 40 50 60 70 80 90 100 110 120 m609.pep
RLRLHIIDDFLDTDFGIGSQADGNVRTLVVRAVLGNFFGTRAKRGYGNHDLHTVAVCPVF
||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| || a609
RLRLHIIDDFLDTDFGIGSQADGNVRTLVVRAILGNFFGTRAKRGYGNHDLHTVAVCTVF 70 80
90 100 110 120 130 m609.pep DFARETDIIIQX 1111:111111 a609
HFAREADIIIQX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1937>:
TABLE-US-02320 g610.seq 1 ATGATTGGAG GGCTTATGCA ATTTCCTTAC
CGCAATGTTC CGGCTTCGCG 51 TATGCGCCGT ATGCGCAGGG ATGATTTTTC
ACGCCGCCTG ATGCGCGAGC 101 ATATGCTGAC CGCCGATGAT TTGATTTATC
CGGTGTTCGT ATTGGAGGGG 151 GCGGCGCGCG AGGAGGATGT GCCTTCTATG
CCGGGCGTGA AGCGTCAGAG 201 TTTGGACAGG CTGCTGTTTA CGGCGGAAGA
GGCGGTGAAG CTCGGTATTC 251 CGATGTTGGC ACTCTTTCCC GTGGTTACGG
CAAACAAAAC CGGGCGTGCG 301 CAGGAGGCGT ACAATCCCGA AGGACTCGTG
CCGTCAACTG tccgagccTT 351 GCGCGAGAGG TttcCcgaac tggggattat
gacggatgtc gcgctcgAtc 401 cttatacggt gcacGGTCAG GACGGACTGA
CGGACgaaaa cggttaCGTG 451 ATGAatgATg aaaCCGTAGA AGTCTTGGTG
AAACAGGCTT TATGTCATGC 501 AGAGGCGGGC ACGCAGGTCG TTGCTCCTTC
CGATATGATG GACGGGCGTA 551 TCGGCGCCAT CCGCGAGGCT TTGGAGGATG
CCGGACATAT CCATACGCGG 601 ATTATGGCAT ATTCCGCCAA ATATGCTTCT
GCATTCTACG GCCCTTTCCG 651 TGATGCGGTA GGCAGTTCGG GCAATTTGGG
AAAGGCAGAT AAAAAGACCT 701 ATCAGATGGA TCCTGCAAAT ACCGATGAGG
CGCTGCATGA AGTGGCGCTC 751 GATATTCAGG AAGGTGCGGA TATGGTGATG
GTGAAGCCCG GTTTGCCGTA 801 TTTGGACGTT GTCCGCCGCG TGAAGGACGA
GTTCGGCGTA CCGACTTATG 851 CCTATCAGGT TTCGGGCGAA TATGCGATGT
TGCAGGCGGC GGTTGCCAAC 901 GGCTGGCTGG ACGGCGGCAA AGTGGTTTTG
GAAAGCCTGC TGGCATTCAA 951 ACGTGCGGGT GCGGACGGGA TTTTGACCTA
TTACGCCATT GAGGCGGCAA 1001 AGATGCTGAA GCGTTGA
This corresponds to the amino acid sequence <SEQ ID 1938; ORF
610.ng>:
TABLE-US-02321 g610.pep 1 MIGGLMQFPY RNVPASRMRR MRRDDFSRRL
MREHMLTADD LIYPVFVLEG 51 AAREEDVPSM PGVKRQSLDR LLFTAEEAVK
LGIPMLALFP VVTANKTGRA 101 QEAYNPEGLV PSTVRALRER FPELGIMTDV
ALDPYTVHGQ DGLTDENGYV 151 MNDETVEVLV KQALCHAEAG TQVVAPSDMM
DGRIGAIREA LEDAGHIHTR 201 IMAYSAKYAS AFYGPFRDAV GSSGNLGKAD
KKTYQMDPAN TDEALHEVAL 251 DIQEGADMVM VKPGLPYLDV VRRVKDEFGV
PTYAYQVSGE YAMLQAAVAN 301 GWLDGGKVVL ESLLAFKRAG ADGILTYYAI
EAAKMLKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1939>:
TABLE-US-02322 m610.seq 1 ATGATTGGAG GGCTTATGCA GTTTCCTTAC
CGCAATGTTC CGGCTTCGCG 51 TATGCGCCGT ATGCGCAGGG ACGATTTTTC
ACGCCGCCTG ATGCGCGAAC 101 ACACGCTGAC CGCCGATGAT TTGATTTATC
CGGTGTTCGT ATTGGAGGGG 151 TCGGCGCGCG AGGAGGATGT GCCTTCTATG
CCGGGTGTGA AGCGTCAAAG 201 TTTGGACAGG CTGCTGTTTA CGGCGGAAGA
GGCGGTAAAG CTCGGTATTC 251 CGATGTTGGC ACTGTTCCCC GTGGTTACGG
CAAACAAAAC CGAGCGTGCG 301 CAGGAGGCGT ACAATCCCGA AGGACTCGTG
CCGTCAACTG TCCGCGCCTT 351 GCGCGAGAGG TTTCCCGAAC TGGGCATTAT
GACGGATGTC GCGCTCGATC 401 CTTATACGGT TCACGGTCAG GACGGGCTGA
CGGACGAAAA CGGTTATGTG 451 ATGAACGATG AAACCGTAGA GGTTTTGGTC
AAGCAGGCTT TGTGCCACGC 501 TGAAGCGGGC GCGCAGGTGG TTGCCCCTTC
CGATATGATG GACGGGCGTA 551 TCGGTGCGAT TCGCGAGGCG TTGGAGGATG
CCGGGCATAT CCATACGCGG 601 ATTATGGCGT ATTCCGCCAA ATATGCTTCT
GCATTTTACG GCCCTTTCCG 651 TGATGCGGTA GGCAGTTCGG GCAATTTGGG
CAAGGCAGAT AAAAAGACCT 701 ACCAGATGGA TCCGGCAAAT ACCGATGAGG
CGTTGCACGA AGTGGCGTTG 751 GACATTCAGG AAGGTGCGGA TATGGTAATG
GTCAAGCCCG GTTTGCCGTA 801 TTTGGACGTT GTCCGCCGCG TAAAGGACGA
GTTCGGTGTG CCGACTTATG 851 CCTATCAGGT TTCGGGAGAA TACGCGATGT
TGCAGGCAGC GATTGCCAAC 901 GGCTGGCTGG ACGGCGGCAA AGTGGTTTTG
GAAAGCCTGC TGGCATTCAA 951 ACGTGCGGGT GCGGACGGGA TTTTGACCTA
TTACGCTATT GAGGCGGCAA 1001 AGATGTTGAA GCGTTGA
This corresponds to the amino acid sequence <SEQ ID 1940; ORF
610>:
TABLE-US-02323 m610.pep 1 MIGGLMQFPY RNVPASRMRR MRRDDFSRRL
MREHTLTADD LIYPVFVLEG 51 SAREEDVPSM PGVKRQSLDR LLFTAEEAVK
LGIPMLALFP VVTANKTERA 101 QEAYNPEGLV PSTVRALRER FPELGIMTDV
ALDPYTVHGQ DGLTDENGYV 151 MNDETVEVLV KQALCHAEAG AQVVAPSDMM
DGRIGAIREA LEDAGHIHTR 201 IMAYSAKYAS AFYGPFRDAV GSSGNLGKAD
KKTYQMDPAN TDEALHEVAL 251 DIQEGADMVM VKPGLPYLDV VRRVKDEFGV
PTYAYQVSGE YAMLQAAIAN 301 GWLDGGKVVL ESLLAFKRAG ADGILTYYAI
EAAKMLKR* m610/g610 98.5% identity in 338 aa overlap 10 20 30 40 50
60 m610.pep
MIGGLMQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLEGSAREEDVPSM
|||||||||||||||||||||||||||||||||| |||||||||||||||:||||||||| g610
MIGGLMQFPYRNVPASRMRRMRRDDFSRRLMREHMLTADDLIYPVFVLEGAAREEDVPSM 10 20
30 40 50 60 70 80 90 100 110 120 m610.pep
PGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPEGLVPSTVRALRER
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| g610
PGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTGRAQEAYNPEGLVPSTVRALRER 70 80
90 100 110 120 130 140 150 160 170 180 m610.pep
FPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALCHAEAGAQVVAPSDMM
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g610
FPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALCHAEAGTQVVAPSDMM 130
140 150 160 170 180 190 200 210 220 230 240 m610.pep
DGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g610
DGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPAN 190
200 210 220 230 240 250 260 270 280 290 300 m610.pep
TDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPLYAYQVSGEYAMLQAAIAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g610
TDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPLYAYQVSGEYAMLQAAVAN 250
260 270 280 290 300 310 320 330 339 m610.pep
GWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKRX
||||||||||||||||||||||||||||||||||||||| g610
GWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKRX 310 320 330
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1941>:
TABLE-US-02324 a610.seq 1 ATGATTGGAG GGCTTATGCA GTTTCCTTAC
CGCAATGTTT CGGCTTCGCG 51 TATGCGCCGT ATGCGCAGGG ACGATTTTTC
ACGCCGCCTG ATGCGCGAGC 101 ATACGCTGAC TGCCGATGAT TTGATTTATC
CGGTGTTCGT ATTGGAGGGG 151 TCGGCGCGCG AGGAGGATGT GCCTTCTATG
CCGGGCGTGA AGCGTCAGAG 201 TTTGGACAGG CTGCTGTTTA CGGCGGAAGA
GGCGGTAAAG CTCGGTATTC 251 CGATGTTGGC ACTGTTCCCC GTGGTTACGG
CAAACAAAAC CGAGCGTGCG 301 CAGGAGGCGT ACAATCCCGA AGGACTCGTG
CCGTCAACTG TCCGCGCCTT 351 GCGCGAGAGG TTTCCCGAAC TGGGCATTAT
GACGGATGTC GCGCTCGATC 401 CTTATACGGT GCACGGTCAG GACGGGCTGA
CGGACGAAAA CGGTTATGTG 451 ATGAACGATG AAACCGTAGA GGTTTTGGTC
AAGCAGGCTT TGTGTCATGC 501 AGAGGCAGGC GCACAGGTCG TTGCTCCTTC
CGATATGATG GATGGGCGTA 551 TCGGTGCGAT TCGCGAGGCG TTGGAGGATG
CCGGGCATAT CCATACGCGG 601 ATTATGGCGT ATTCCGCCAA ATATGCTTCT
GCATTTTACG GCCCTTTCCG 651 TGATGCGGTA GGCAGTTCGG GCAATTTGGG
CAAGGCAGAT AAAAAGACCT 701 ACCAGATGGA TCCGGCAAAT ACCGATGAGG
CGTTGCACGA AGTGGCGTTG 751 GACATTCAGG AAGGTGCGGA TATGGTGATG
GTCAAGCCCG GTTTGCCGTA 801 TTTGGACGTT GTCCGCCGCG TGAAGGACGA
GTTCGGCGTG CCGACTTATG 851 CCTATCAGGT TTCGGGAGAA TACGCGATGC
TGCAGGCGGC GGTTGCCAAC 901 GGCTGGCTGG ACGGCGGCAA AGTGGTTTTG
GAAAGCCTGC TGGCATTCAA 951 ACGTGCGGGT GCGGATGGGA TTTTGACCTA
TTACGCCATT GAGGCGGCAA 1001 AGATGCTGAA GCGTTGA
This corresponds to the amino acid sequence <SEQ ID 1942; ORF
610.a>:
TABLE-US-02325 a610.pep 1 MIGGLMQFPY RNVSASRMRR MRRDDFSRRL
MREHTLTADD LIYPVFVLEG 51 SAREEDVPSM PGVKRQSLDR LLFTAEEAVK
LGIPMLALFP VVTANKTERA 101 QEAYNPEGLV PSTVRALRER FPELGIMTDV
ALDPYTVHGQ DGLTDENGYV 151 MNDETVEVLV KQALCHAEAG AQVVAPSDMM
DGRIGAIREA LEDAGHIHTR 201 IMAYSAKYAS AFYGPFRDAV GSSGNLGKAD
KKTYQMDPAN TDEALHEVAL 251 DIQEGADMVM VKPGLPYLDV VRRVKDEFGV
PTYAYQVSGE YAMLQAAVAN 301 GWLDGGKVVL ESLLAFKRAG ADGILTYYAI
EAAKMLKR* m610/a610 99.4% identity in 338 aa overlap 10 20 30 40 50
60 m610.pep
MIGGLMQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLEGSAREEDVPSM
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| a610
MIGGLMQFPYRNVSASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLEGSAREEDVPSM 10 20
30 40 50 60 70 80 90 100 110 120 m610.pep
PGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPEGLVPSTVRALRER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a610
PGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPEGLVPSTVRALRER 70 80
90 100 110 120 130 140 150 160 170 180 m610.pep
FPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALCHAEAGAQVVAPSDMM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a610
FPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALCHAEAGAQVVAPSDMM 130
140 150 160 170 180 190 200 210 220 230 240 m610.pep
DGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a610
DGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPAN 190
200 210 220 230 240 250 260 270 280 290 300 m610.pep
TDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPTYAYQVSGEYAMLQAAIAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a610
TDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPTYAYQVSGEYAMLQAAVAN 250
260 270 280 290 300 310 320 330 339 m610.pep
GWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKRX
||||||||||||||||||||||||||||||||||||||| a610
GWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKRX 310 320 330
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1943>:
TABLE-US-02326 g611.seq 1 ATGCCGTCTG AAAACGGGAT GGGAAAACGG
CAGCTTGCGG GCTGCCGTTT 51 GTTCGGGAAG TTAAGCCTTG TTTTCAGGCT
GCTGCCCGGA CTCTGTCGAG 101 GCGGTGTCTG CCGGGGCAGG TGCTTCGGTT
TTTTCCCGAG TCGGAGCGTG 151 CGGCGCGTTA TCTTCCGCCG CGTCCGCATT
Ctcgcgcagg ttgtGGCtgt 201 tatcctTGGG CGGGCTGggt tgtttgcccg
ccataaTTtc cagtacctgA 251 TcgcgGTCta tggtttcCCa ttCcatcagg
gctttgcaca TCGTTTCCAT 301 cttgTCGCGG TTTTcatcga ggaTTTTGTA
ggcaacCTGA TACTgctcgt 351 ccaaaAtccg Gcggatttcc gcgtcgAtgt
cctgctgggt tTTCTCGGAA 401 ATGTTTTGCG AACGGgttac gctGCGCCCC
AAGAAGACTT CGCCTTCGTT 451 TTCCGCATAA ACCATCACGC CCATTTTGtc
gCTCAtgcCG TAGCGCGTTA 501 CCATTTCGCG TGCCATTTGG GTTGCGCGTT
CAAAGTCGTT TGA
This corresponds to the amino acid sequence <SEQ ID 1944; ORF
611.ng>:
TABLE-US-02327 g611.pep 1 MPSENGMGKR QLAGCRLFGK LSLVFRLLPG
LCRGGVCRGR CFGFFPSRSV 51 RRVIFRRVRI LAQVVAVILG RAGLFARHNF
QYLIAVYGFP FHQGFAHRFH 101 LVAVFIEDFV GNLILLVQNP ADFRVDVLLG
FLGNVLRTGY AAPQEDFAFV 151 FRINHHAHFV AHAVARYHFA CHLGCAFKVV *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1945>:
TABLE-US-02328 m611.seq 1 ATGCCGTCTG AAAACGGGAT GGGAAAACGG
CAGCTTGCGG GCTGCCGTTT 51 GTTCGGGAAG TTAAGCCTTG TTTTCAGGCT
GCTGCTCGGA CTCTGTCGAA 101 GCGGTGTCTG CCGGGGCAGG TGCTTCGGTT
TCTTCCCGAG TCGGAGCGTG 151 CGGCGCGTTA TCTTCCGCCG CGTCCGCATT
CTCGCGCAGG TTGTGGCTGT 201 AATCTTTGGG CGGGCTGGGT TGTTTGCCCG
CCATGATTTC CAGTACCTGA 251 TCGCGGTCGA TGGTTTCCCA TTCCATCAGG
GCTTTGCACA TCGTTTCCAT 301 CTTGTCGCGG TTTTCATCGA GGATTTTGTA
GGCAACCTGA TATTGCTCGT 351 CCAAAATCCG GCGGATTTCC GCGTCGATGT
CCTGCTGGGT TTTCTCGGAA 401 ATGTTTTGCG AACGGGTTAC GCTGCGTCCC
AAGAAGACTT CGCCTTCGTT 451 TTCCGCATAA ACCATCACGC CCATTTTGTC
GCTCATGCCG TAGCGCGTTA 501 CCATTTCGCG CGCCATTTGG GTTGCGCGTT
CAAAGTCGTT TGA
This corresponds to the amino acid sequence <SEQ ID 1946; ORF
611>:
TABLE-US-02329 m611.pep 1 MPSENGMGKR QLAGCRLFGK LSLVFRLLLG
LCRSGVCRGR CFGFFPSRSV 51 RRVIFRRVRI LAQVVAVIFG RAGLFARHDF
QYLIAVDGFP FHQGFAHRFH 101 LVAVFIEDFV GNLILLVQNP ADFRVDVLLG
FLGNVLRTGY AASQEDFAFV 151 FRINHHAHFV AHAVARYHFA RHLGCAFKVV *
m611/g611 96.1% identity in 180 aa overlap 10 20 30 40 50 60
m611.pep
MPSENGMGKRQLAGCRLFGKLSLVFRLLLGLCRSGVCRGRCFGFFPSRSVRRVIFRRVRI
|||||||||||||||||||||||||||| ||||:|||||||||||||||||||||||||| g611
MPSENGMGKRQLAGCRLFGKLSLVFRLLPGLCRGGVCRGRCFGFFPSRSVRRVIFRRVRI 10 20
30 40 50 60 70 80 90 100 110 120 m611.pep
LAQVVAVIFGRAGLFARHDFQYLIAVDGFPFHQGFAHRFHLVAVFIEDFVGNLILLVQNP
||||||||:|||||||||:||||||| ||||||||||||||||||||||||||||||||| g611
LAQVVAVILGRAGLFARHNFQYLIAVYGFPFHQGFAHRFHLVAVFIEDFVGNLILLVQNP 70 80
90 100 110 120 130 140 150 160 170 180 m611.pep
ADFRVDVLLGFLGNVLRTGYAASQEDFAFVFRINHHAHFVAHAVARYHFARHLGCAFKVV
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| g611
ADFRVDVLLGFLGNVLRTGYAAPQEDFAFVFRINHHAHFVAHAVARYHFACHLGCAFKVV 130
140 150 160 170 180 m611.pep X | g611 X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1947>:
TABLE-US-02330 a611.seq 1 ATGCCGTCTG AAAACAGGAT GGGAAAACGG
CAGCTTGCGG GCTGCCGTTT 51 GTTCGGGAAG TTAAGCCTTG TTTTCAGGCT
GCTGCTCGGA CTCTGTCGAA 101 GCGGTGTCTG CCGGGGCAGG TGCTTCGGTT
TCTTCCCGAG TCGGAGCGTG 151 CGGCGCGTTA TCTTCCGCCG CGTCCGCATT
CTCGCGCAGG TTGTGGCTGT 201 AATCTTTGGG CGGGCTGGGT TGTTTGCCCG
CCATGATTTC CAGTACCTGA 251 TCGCGGTCGA TGGTTTCCCA TTCCATCAGG
GCTTTGCACA TCGTTTCCAT 301 CTTGTCGCGG TTTTCATCGA GGATTTTGTA
GGCAACCTGA TACTGCTCGT 351 CCAAAATCCG GCGGATTTCC GCATCGATGT
CCTGCTGGGT TTTCTCGGAA 401 ATGTTTTGCG AACGGGTTAC GCTGCGTCCC
AAGAAGACTT CGCCTTCGTT 451 TTCCGCATAA ACCATCACGC CCATTTTGTC
GCTCATGCCG TAGCGCGTTA 501 CCATTTCGCG CGCCATTTGG GTTGCGCGTT
CAAAGTCGTT TGA
This corresponds to the amino acid sequence <SEQ ID 1948; ORF
611.a>:
TABLE-US-02331 a611.pep 1 MPSENRMGKR QLAGCRLFGK LSLVFRLLLG
LCRSGVCRGR CFGFFPSRSV 51 RRVIFRRVRI LAQVVAVIFG RAGLFARHDF
QYLIAVDGFP FHQGFAHRFH 101 LVAVFIEDFV GNLILLVQNP ADFRIDVLLG
FLGNVLRTGY AASQEDFAFV 151 FRINHHAHFV AHAVARYHFA RHLGCAFKVV *
m611/a611 98.9% identity in 180 aa overlap 10 20 30 40 50 60
m611.pep
MPSENGMGKRQLAGCRLFGKLSLVFRLLLGLCRSGVCRGRCFGFFPSRSVRRVIFRRVRI |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a611
MPSENRMGKRQLAGCRLFGKLSLVFRLLLGLCRSGVCRGRCFGFFPSRSVRRVIFRRVRI 10 20
30 40 50 60 70 80 90 100 110 120 m611.pep
LAQVVAVIFGRAGLFARHDFQYLIAVDGFPFHQGFAHRFHLVAVFIEDFVGNLILLVQNP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a611
LAQVVAVIFGRAGLFARHDFQYLIAVDGFPFHQGFAHRFHLVAVFIEDFVGNLILLVQNP 70 80
90 100 110 120 130 140 150 160 170 180 m611.pep
ADFRVDVLLGFLGNVLRTGYAASQEDFAFVFRINHHAHFVAHAVARYHFARHLGCAFKVV
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| a611
ADFRIDVLLGFLGNVLRTGYAASQEDFAFVFRINHHAHFVAHAVARYHFARHLGCAFKVV 130
140 150 160 170 180 m611.pep X | a611 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1949>:
TABLE-US-02332 g612.seq 1 ATGGgcttcg gcggcaatat tgcAAAAAAG
CTGGCcggGg taGATGAAAT 51 AGCCTttgac tttgacggcA TCGTCTTTGA
TTTCGGGCGT GATGATGCTG 101 TCCGGCataG CGGCGTAATC AATGCTGCTG
TCGCCGGCCT GCATATAGTC 151 GGTGAAGTTT TCGCTGATAA AGCGGTAGAA
AAGTGTGCCG AGAACGTATT 201 GTTTAAAGTC CCAGCCATCC ACCGCGCCGC
GTACTTCGTC GGCGATTTTC 251 CAAATTTGGC GGTGCAGTTG GGCGCGTTGT
TGCATTTCGG TCATCATCGA 301 AATCCATATA TAAAGTTAAA CAAATCAAAA
TCGCCTGATA TTTTCAGACG 351 ATTTTTTTAC GGGCATTCAA ATTAA
This corresponds to the amino acid sequence <SEQ ID 1950; ORF
612.ng>:
TABLE-US-02333 g612.pep 1 MGFGGNIAKK LAGVDEIAFD FDGIVFDFGR
DDAVRHSGVI NAAVAGLHIV 51 GEVFADKAVE KCAENVLFKV PAIHRAAYFV
GDFPNLAVQL GALLHFGHHR 101 NPYIKLNKSK SPDIFRRFFY GHSN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1951>:
TABLE-US-02334 m612.seq 1 ATGGGCTTCG GCGGCAATAT TGCAAAAAAG
CTGGCCGGGG TAGATGAAAT 51 AGCCTTTAAC TTTGACGGCA TCGTCTTTGA
TTTCGGGCGT GATGATGCTG 101 TCCGGCATAG CGGCGTAATC AATACTGCTG
TCGCCTGCCT GCATATAGTC 151 GGTGAAGTTT TCGCTGATAA AGCGGTAGAA
AAGTGTGCCG AGAACGTATT 201 GTTTAAAGTC CCAGCCATCC ACCGCGCCGC
GTACTTCGTC GGCAATTTTC 251 CAAATTTGGC GGTGCAGTTG GGCGCGTTGT
TGCATTTCGG TCATCATCGA 301 AATCCATATA .AAAGTTAAA CAAATCAAAA
TCGCCTGATA TTTTCAGACG 351 ATTTTTTTAC GGGCATTCAA ATTAA
This corresponds to the amino acid sequence <SEQ ID 1952; ORF
612>:
TABLE-US-02335 m612.pep 1 MGFGGNIAKK LAGVDEIAFN FDGIVFDFGR
DDAVRHSGVI NTAVACLHIV 51 GEVFADKAVE KCAENVLFKV PAIHRAAYFV
GNFPNLAVQL GALLHFGHHR 101 NPYXKLNKSK SPDIFRRFFY GHSN* m612/g612
96.0% identity in 124 aa overlap 10 20 30 40 50 60 m612.pep
MGFGGNIAKKLAGVDEIAFNFDGIVFDFGRDDAVRHSGVINTAVACLHIVGEVFADKAVE
|||||||||||||||||||:|||||||||||||||||||||:||| |||||||||||||| g612
MGFGGNIAKKLAGVDEIAFDFDGIVFDFGRDDAVRHSGVINAAVAGLHIVGEVFADKAVE 10 20
30 40 50 60 70 80 90 100 110 120 m612.pep
KCAENVLFKVPAIHRAAYFVGNFPNLAVQLGALLHFGHHRNPYXKLNKSKSPDIFRRFFY
|||||||||||||||||||||:||||||||||||||||||||| |||||||||||||||| g612
KCAENVLFKVPAIHRAAYFVGDFPNLAVQLGALLHFGHHRNPYIKLNKSKSPDIFRRFFY 70 80
90 100 110 120 m612.pep GHSNX ||||| g612 GHSNX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1953>:
TABLE-US-02336 a612.seq 1 ATGGGCTTCG GCGGCAATAT TGCAAAAAAG
CTGGCCGGGG TAGATGAAAT 51 AGCCTTTGAC TTTGACGGCA TCGTCTTTGA
TTTCGGGCGT GATGATGCTG 101 TCCGGCATAG CGGCGTAATC AATACTGCTG
TCGCCTGCCT GCATATAGTC 151 GGTAAAGTTT TCGCTGATAA AGCGGTAGAA
AAGTGTGCCG AGAACGTATT 201 GTTTGAAGTC CCAGCCATCC ACCGCGCCGC
GTACTTCGTC GGCAATTTTC 251 CAAATTTGGC GGTGCAGTTG GGCGCGTTGT
TGTATTTCGG TCATCATCGA 301 AATCCATAT. AAAAGTTAAA CAAATCAAAA
TCGCCTGATA TTTTCAGACG 351 ATTTTTT.AC GGGCATTCAA ATTAA
This corresponds to the amino acid sequence <SEQ ID 1954: ORF
612.a>:
TABLE-US-02337 a612.pep 1 MGFGGNIAKK LAGVDEIAFD FDGIVFDFGR
DDAVRHSGVI NTAVACLHIV 51 GKVFADKAVE KCAENVLFEV PAIHRAAYFV
GNFPNLAVQL GALLYFGHHR 101 NPYXKLNKSK SPDIFRRFFX GHSN* m612/a612
96.0% identity in 124 aa overlap 10 20 30 40 50 60 m612.pep
MGFGGNIAKKLAGVDEIAFNFDGIVFDFGRDDAVRHSGVINTAVACLHIVGEVFADKAVE
|||||||||||||||||||:|||||||||||||||||||||||||||||||:|||||||| a612
MGFGGNIAKKLAGVDEIAFDFDGIVFDFGRDDAVRHSGVINTAVACLHIVGKVFADKAVE 10 20
30 40 50 60 70 80 90 100 110 120 m612.pep
KCAENVLFKVPAIHRAAYFVGNFPNLAVQLGALLHFGHHRNPYXKLNKSKSPDIFRRFFY
||||||||:|||||||||||||||||||||||||:|||||||||||||||||||||||| a612
KCAENVLFEVPAIHRAAYFVGNFPNLAVQLGALLYFGHHRNPYXKLNKSKSPDIFRRFFX 70 80
90 100 110 120 m612.pep GHSNX ||||| a612 GHSNX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1955>:
TABLE-US-02338 g613.seq 1 ATGTCGCGTT CGAGCCTGTC GAGGCGTTCG
TTGAGGCGTT CCACGCCGTC 51 GCGCAGTCTG CTTATTTCGT CGaggcagtc
ggcaagggct tcgttgccgg 101 tgtttGcgGA CTCGGGTTCG CGGGAAAATC
CGCCGATTTG TTCGGCGATG 151 TTCCTGCCGA TTTgtttGAt GCCGTGTCCG
ATGTCGGTGG CACGgctgcc 201 gatgcCTGCC TGCGTGCCGA AAATCCGTGC
CAATTcgtCC GATGCGCGGG 251 AACGCAGGCT GCCGAGCAGG GACAGTACCG
CgATGCCGAG GATGAGGTCG 301 CCTTCGAGCC TGATGTCGCC AGCCCCGGGT
TCGCCGCCTT GGAGGATTTT 351 CCGTATCGCG CTGTTGCGGA AGGTAATTTC
GGTGTCTGCA AAGCCGTTTC 401 CCGCCGAGAG CAAACCGTCT TCTGTGATGC
GTCCCGCCAG TTTCAGCCCG 451 GCAATGTTCA GGGTCAGTGT TTTGCCTGCA
AAGGAGGTAA GTTCCGAGCG 501 GCTGTCCGGG CTTTGCAGAA TCAGGCGGTT
GATGATGGGG AGGAGGGCGG 551 ACATATTTTC TGATTGGGGC GGAGAATGCC
TGTTGTTGCT GTTGCCGCTT 601 ATTTTACAGG CTTAA
This corresponds to the amino acid sequence <SEQ ID 1956; ORF
613.ng>:
TABLE-US-02339 g613.pep 1 MSRSSLSRRS LRRSTPSRSL LISSRQSARA
SLPVFADSGS RENPPICSAM 51 FLPICLMPCP MSVARLPMPA CVPKIRANSS
DARERRLPSR DSTAMPRMRS 101 PSSLMSPAPG SPPWRIFRIA LLRKVISVSA
KPFPAESKPS SVMRPASFSP 151 AMFRVSVLPA KEVSSERLSG LCRIRRLMMG
RRADIFSDWG GECLLLLLPL 201 ILQA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1957>:
TABLE-US-02340 m613.seq 1 ATGTCGCGTT CGAGCCGGTC GAGGCGTTCG
TTGAGGCGTT CCACGCCGTC 51 GCGCAGTCTG CTTATTTCGT CGAGGCAGTC
GGCAAGGGCT TCGTTGCCGA 101 TGTTTGCGGA CTCGGATTCG CGGGAAAATC
CGCCGATTTG TTCGGCGATG 151 TTCCTGCCGA TTTGTTTGAT GCCGTGTCCG
ATGTCGGCGG CACGGCTGCC 201 GATGTCTGCC TGCGTGCCGA AAATCCGTGC
CAATTCGTCC GATGCGCGGG 251 AACGCAGGCT GCCGAGCAGG GACAGTACCG
CGATGCCGAG GATGAGGTCG 301 CCTTCGAGCC CGATGTCGCC CGCCCCGGGT
TCGCCTCCTT GGAGGATTTT 351 CTGTACCGCG CTGTTGCGGA AGGTAATTTC
GGTGTCTGCA AAGCCGTTTC 401 CCGCCGAGAG CAAACCGTCT TCCGTGATGC
GTCCCGCCAG TTTCAGCCCG 451 GCAATGTTCA GGGTCAGTGT TTTGCCTGCA
AAGGCGGCAA GTTCCGAGCG 501 GCTGTCCGGG CTTTGCAGAA TCAGGCGGTT
GATGATGGGG AGGAGGGCGG 551 ACATATTTTC TGATCGGGGC GGAGAATGCC
TGTTGTTGCT GTTGCCGCTT 601 ATTTTACAGG CTTAA
This corresponds to the amino acid sequence <SEQ ID 1958; ORF
613>:
TABLE-US-02341 m613.pep 1 MSRSSRSRRS LRRSTPSRSL LISSRQSARA
SLPMFADSDS RENPPICSAM 51 FLPICLMPCP MSAARLPMSA CVPKIRANSS
DARERRLPSR DSTAMPRMRS 101 PSSPMSPAPG SPPWRIFCTA LLRKVISVSA
KPFPAESKPS SVMRPASFSP 151 AMFRVSVLPA KAASSERLSG LCRIRRLMMG
RRADIFSDRG GECLLLLLPL 201 ILQA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02342 m613/g613 94.6% identity in 204 aa overlap 10 20 30
40 50 60 m613.pep
MSRSSRSRRSLRRSTPSRSLLISSRQSARASLPMFADSDSRENPPICSAMFLPICLMPCP |||||
|||||||||||||||||||||||||||:|||| ||||||||||||||||||||| g613
MSRSSLSRRSLRRSTPSRSLLISSRQSARASLPVFADSGSRENPPICSAMFLPICLMPCP 10 20
30 40 50 60 70 80 90 100 110 120 m613.pep
MSAARLPMSACVPKIRANSSDARERRLPSRDSTAMPRMRSPSSPMSPAPGSPPWRIFCTA
||:||||| |||||||||||||||||||||||||||||||||| ||||||||||||| | g613
MSVARLPMPACVPKIRANSSDARERRLPSRDSTAMPRMRSPSSLMSPAPGSPPWRIFRIA 70 80
90 100 110 120 130 140 150 160 170 180 m613.pep
LLRKVISVSAKPFPAESKPSSVMRPASFSPAMFRVSVLPAKAASSERLSGLCRIRRLMMG
||||||||||||||||||||||||||||||||||||||||| :||||||||||||||||| g613
LLRKVISVSAKPFPAESKPSSVMRPASFSPAMFRVSVLPAKEVSSERLSGLCRIRRLMMG 130
140 150 160 170 180 190 200 m613.pep RRADIFSDRGGECLLLLLPLILQAX
|||||||| |||||||||||||||| g613 RRADIFSDWGGECLLLLLPLILQAX 190
200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1959>:
TABLE-US-02343 a613.seq 1 ATGTCGCGTT CGAGCCGGTC GAGGCGTTCG
TTGAGGCGTT CCACGCCGTC 51 GCGCAGTCTG CTTATTTCGT CGAGGCAGTC
GGCAAGGGCT TCGTTGCCGA 101 TGTTTGCGGA CTCGGGTTCG CGGGAAAATC
TGCCGATTTG TTCGGCGATG 151 TTCCTGCCGA TTTGTTTGAT GCCGTGTCCG
ATGTCGGCGG CACGGCTGCC 201 GATGTCTGCC TGCGTGCCGA AAATCCGTGC
CAATTCGTCC GATGCGCGGG 251 AACGCAGGCT GCCGAGCAGG GACAGTACCG
CGATGCCGAG GATGAGGTCG 301 CCTTCGAGCC CGATGTCGCC CGCCCCGGGT
TCGCCGCCTT GGAGGATTTT 351 CTGTACCGCG CTGTTGCGGA AGGTGATTTC
GGTGTCTGCA AAGCCGTTTC 401 CCGCCGAGAG CAAACCGTCT TCCGTGATGC
GTCCCGCCAG TTTCAACCCG 451 GCAATGTTCA GGGTCAGTGT TTTGCCTGCG
AAGGCGGCAA GTTCCGAGCG 501 GCTGTCCGGG CTTTGCAGAA TCAGGCGGTT
GATGATGGGG AGGAGGGCGG 551 ACATATTTTC TGATCGGGGC GGAGAATGCC
TGTTGTTGCT GTTGACGCTT 601 ATTTTACAGG CTTAA
This corresponds to the amino acid sequence <SEQ ID 1960; ORF
613.a>:
TABLE-US-02344 a613.pep 1 MSRSSRSRRS LRRSTPSRSL LISSRQSARA
SLPMFADSGS RENLPICSAM 51 FLPICLMPCP MSAARLPMSA CVPKIRANSS
DARERRLPSR DSTAMPRMRS 101 PSSPMSPAPG SPPWRIFCTA LLRKVISVSA
KPFPAESKPS SVMRPASFNP 151 AMFRVSVLPA KAASSERLSG LCRIRRLMMG
RRADIFSDRG GECLLLLLTL 201 ILQA* m613/a613 98.0% identity in 204 aa
overlap 10 20 30 40 50 60 m613.pep
MSRSSRSRRSLRRSTPSRSLLISSRQSARASLPMFADSDSRENPPICSAMFLPICLMPCP
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| a613
MSRSSRSRRSLRRSTPSRSLLISSRQSARASLPMFADSGSRENLPICSAMFLPICLMPCP 10 20
30 40 50 60 70 80 90 100 110 120 m613.pep
MSAARLPMSACVPKIRANSSDARERRLPSRDSTAMPRMRSPSSPMSPAPGSPPWRIFCTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a613
MSAARLPMSACVPKIRANSSDARERRLPSRDSTAMPRMRSPSSPMSPAPGSPPWRIFCTA 70 80
90 100 110 120 130 140 150 160 170 180 m613.pep
LLRKVISVSAKPFPAESKPSSVMRPASFSPAMFRVSVLPAKAASSERLSGLCRIRRLMMG
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| a613
LLRKVISVSAKPFPAESKPSSVMRPASFNPAMFRVSVLPAKAASSERLSGLCRIRRLMMG 130
140 150 160 170 180 190 200 m613.pep RRADIFSDRGGECLLLLLPLILQAX
|||||||||||||||||| |||||| a613 RRADIFSDRGGECLLLLLTLILQAX 190
200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1961>:
TABLE-US-02345 g614.seq 1 AtggcTgcgt tcAacgcttt ggacggcaaa
aaagaagaca acgggcaaat 51 cgaaTATTCT CAGTTCATCC GACAGGTCAA
CAACGGCGAA GTATCCGGCG 101 TCAACATCGA AGGATCCGTC GTCAGCGGTT
ACCTGATTAA AGGCGAGCGC 151 ACCGACAAAA GCACCTTCTT CACCAACGCG
CCCTTGGATG ACAACCTGAT 201 TCAAACCCTT TTGAACAAAA ACGTCCGCGT
AAAAGTAACG CCGGAAGAAA 251 AACCGAGCGC GCTGACTGCC CTGTTTTACA
GCCTGCTGCC CGTCCTGCTG 301 CTGATTGGCG CATGGTTCTA CTTTATGCGT
ATGCAGGCGG GCGGCGGCGG 351 AAAAGGCGGC GCATTCTCCT TCGGCAAAAG
CCGCGCCCGC CTGCTGGACA 401 AAGATGCCAA CAAAGTTACC TTTGCCGATG
TCGCCGGCTG CGACGAAGCC 451 AAAGAAGAAG TGCAGGAAAT CGTCGATTAC
CTCAAAGCAC CGAACCGCta 501 tcaAAGcctc ggcggccgtg ttcCGCGCGG
CATCCtgCtg gcgGgcagcc 551 CGGGAaccgg taaAACACTC TTGGCGAAAG
CCATTGCAGG CGAGGCCGGC 601 GTGCCGTTCT TCAGCATTTC CGGTTCCGAT
TTTGTCGAAA TGTTCGTCGG 651 TGTCGGTGCA AGCCGCGTCC GCGATATGTT
CGAGCAGGCA AAGAAAAACG 701 CCCCATGCAT TATCTTTATC GACGAGATTG
ACGCGGTAGG CCGCCAACGC 751 GGCGCAGgTT TGGGCGGCGG CAATGATGAG
CGCGAGCAAA CATTAAACCA 801 ATTATTGGTT GAAATGGACG GTTTTGAGAG
CAATCAGACT GTAATTGTGA 851 TTGCGGCAAC CAACCGCCCC GACGTACTCG
ATCCTGCGCT GCAACGCCCC 901 GGCCGCTTCG ACCGCCAAGT CGTCGTCCCC
CTGCCGGACA TCCGGGGGCG 951 CGAACAGatn ttGAACGTCC ATTCtaaAAA
AGTGCcttTG gacgaATCTg 1001 tggaTTTATT GTCCCTCGCG CGCGGCACGC
ccggtttTTc cggcgcggat 1051 tTggcgaaac tggtcaacga agcccccctg
tttgccggcc gccgcaacaa 1101 agtgaaagtc gatcaaagcg attTGAAGAC
GCCAAAGACA AAATCTATAT 1151 GGGTCCGGAA CGCCGCAGTA TGGTGA
This corresponds to the amino acid sequence <SEQ ID 1962; ORF
614.ng>:
TABLE-US-02346 g614.pep 1 MAAFNALDGK KEDNGQIEYS QFIRQVNNGE
VSGVNIEGSV VSGYLIKGER 51 TDKSTFFTNA PLDDNLIQTL LNKNVRVKVT
PEEKPSALTA LFYSLLPVLL 101 LIGAWFYFMR MQAGGGGKGG AFSFGKSRAR
LLDKDANKVT FADVAGCDEA 151 KEEVQEIVDY LKAPNRYQSL GGRVPRGILL
AGSPGTGKTL LAKAIAGEAG 201 VPFFSISGSD FVEMFVGVGA SRVRDMFEQA
KKNAPCIIFI DEIDAVGRQR 251 GAGLGGGNDE REQTLNQLLV EMDGFESNQT
VIVIAATNRP DVLDPALQRP 301 GRFDRQVVVP LPDIRGREQX LNVHSKKVPL
DESVDLLSLA RGTPGFSGAD 351 LAKLVNEAPL FAGRRNKVKV DQSDLKTPKT
KSIWVRNAAV W*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1963>:
TABLE-US-02347 m614.seq 1 ATGGCTGCGT TCAACGCTTT AGACGGTAAA
AAAGAAGACA ACGGGCAAAT 51 CGAATACTCT CAGTTCATCC AACAGGTCAA
CAACGGCGAA GTATCCGGCG 101 TCAACATCGA AGGATCCGTC GTCAGCGGCT
ACCTGATTAA GGGCGAGCGC 151 ACCGACAAAA GCACTTTCTT CACCAACGCG
CCTTTGGACG ACAACCTAAT 201 TAAAACACTG CTCGACAAAA ACGTCCGCGT
AAAAGTAACG CCGGAAGAAA 251 AACCGAGCGC GCTGGCTGCC CTGTTTTACA
GCCTGCTGCC CGTCCTGCTG 301 CTGATTGGCG CATGGTTCTA CTTCATGCGT
ATGCAGACGG GCGGCGGCGG 351 AAAAGGCGGC GCATTCTCAT TCGGTAAAAG
CCGCGCCCGC CTGCTGGACA 401 AAGATGCCAA CAAAGTGACC TTTGCCGATG
TCGCCGGCTG CGACGAAGCC 451 AAAGAAGAAG TACAGGAAAT CGTCGATTAC
CTCAAAGCGC CGAACCGCTA 501 TCAAAGCCTG GGCGGGCGCG TGCCGCGCGG
CATCCTGCTG GCGGGCAGCC 551 CGGGTACGGG TAAGACGCTT TTGGCGAAAG
CGATTGCAGG CGAAGCCGGC 601 GTGCCGTTCT TCAGCATTTC AGGTTCCGAC
TTTGTCGAAA TGTTCGTCGG 651 TGTCGGTGCG AGCCGCGTCC GCGATATGTT
CGAGCAGGCG AAGAAAAACG 701 CCCCCTGCAT CATCTTTATC GACGAGATTG
ACGCAGTCGG CCGCCAACGC 751 GGCGCAGGTT TGGGCGGCGG CAATGATGAG
CGCGAGCAAA CATTAAACCA 801 ATTGTTGGTT GAAATGGACG GTTTTGAGAG
CAATCAGACT GTAATTGTGA 851 TTGCGGCAAC CAACCGCCCC GACGTACTCG
ATCCTGCGCT GCAACGCCCC 901 GGCCGTTTCG ACCGCCAAGT GGTTGTCCCC
CTGCCGGACA TCCGAGGGCG 951 CGAACAGATT TTGAACGTCC ATTCTAAAAA
AGTGCCTTTG GACGAATCTG 1001 TGGATTTATT GTCCCTCGCG CGCGGCACGC
CGGGTTTTTC CGGCGCGGAT 1051 TTGGCGAACT TGGTCAACGA AGCCGCCCTG
TTTGCCGGCC GCCGCAATAA 1101 AGTCAAAGTC GATCAGAGCG ATTTGAAGAC
GCCAAAGACA AAATCTATAT 1151 GGGTCCGGAA CGCCGCAGTA TGGTGA
This corresponds to the amino acid sequence <SEQ ID 1964; ORF
614>:
TABLE-US-02348 m614.pep 1 MAAFNALDGK KEDNGQIEYS QFIQQVNNGE
VSGVNIEGSV VSGYLIKGER 51 TDKSTFFTNA PLDDNLIKTL LDKNVRVKVT
PEEKPSALAA LFYSLLPVLL 101 LIGAWFYFMR MQTGGGGKGG AFSFGKSRAR
LLDKDANKVT FADVAGCDEA 151 KEEVQEIVDY LKAPNRYQSL GGRVPRGILL
AGSPGTGKTL LAKAIAGEAG 201 VPFFSISGSD FVEMFVGVGA SRVRDMFEQA
KKNAPCIIFI DEIDAVGRQR 251 GAGLGGGNDE REQTLNQLLV EMDGFESNQT
VIVIAATNRP DVLDPALQRP 301 GRFDRQVVVP LPDIRGREQI LNVHSKKVPL
DESVDLLSLA RGTPGFSGAD 351 LANLVNEAAL FAGRRNKVKV DQSDLKTPKT
KSIWVRNAAV W*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02349 m614/g614 98.0% identity in 391 aa overlap 10 20 30
40 50 60 m614.pep
MAAFNALDGKKEDNGQIEYSQFIQQVNNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNA
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| g614
MAAFNALDGKKEDNGQIEYSQFIRQVNNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNA 10 20
30 40 50 60 70 80 90 100 110 120 m614.pep
PLDDNLIKTLLDKNVRVKVTPEEKPSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGG
|||||||:|||:||||||||||||||||:|||||||||||||||||||||||:||||||| g614
PLDDNLIQTLLNKNVRVKVTPEEKPSALTALFYSLLPVLLLIGAWFYFMRMQAGGGGKGG 70 80
90 100 110 120 130 140 150 160 170 180 m614.pep
AFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g614
AFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILL 130
140 150 160 170 180 190 200 210 220 230 240 m614.pep
AGSPGTGKTLLAKAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g614
AGSPGIGKILLAKAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFI 190
200 210 220 230 240 250 260 270 280 290 300 m614.pep
DEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g614
DEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRP 250
260 270 280 290 300 310 320 330 340 350 360 m614.pep
GRFDRQVVVPLPDIRGREQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAAL
||||||||||||||||||| ||||||||||||||||||||||||||||||||:||||| | g614
GRFDRQVVVPLPDIRGREQXLNVHSKKVPLDESVDLLSLARGTPGFSGADLAKLVNEAPL 310
320 330 340 350 360 370 380 390 m614.pep
FAGRRNKVKVDQSDLKTPKTKSIWVRNAAVWX ||||||||||||||||||||||||||||||||
g614 FAGRRNKVKVDQSDLKTPKTKSIWVRNAAVWX 370 380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1965>:
TABLE-US-02350 a614.seq 1 ATGGCTGCGT TCAACGCTTT AGACGGTAAA
AAAGAAGACA ACGGGCAAAT 51 CGAATATTCT CAGTTCATCC AACAGGTCAA
CAACGGCGAA GTATCCGGCG 101 TCAACATCGA AGGATCCGTC GTCAGCGGCT
ACCTGATTAA GGGCGAGCGC 151 ACCGACAAAA GCACCTTCTT CACCAACGCG
CCTTTGGACG ACAACCTGAT 201 TAAAACACTG CTCGACAAAA ACGTCCGTGT
AAAAGTAACG CCGGAAGAAA 251 AACCGAGCGC GCTGGCTGCC CTGTTTTACA
GCCTGCTGCC CGTCCTGCTG 301 CTGATTGGCG CGTGGTTCTA CTTTATGCGT
ATGCAGACGG GCGGCGGCGG 351 AAAAGGCGGC GCATTCTCAT TCGGCAAAAG
CCGCGCCCGC CTACTGGACA 401 AAGATGCCAA CAAAGTTACC TTTGCCGATG
TCGCCGGCTG CGACGAAGCC 451 AAAGAAGAAG TGCAGGAAAT CGTCGATTAC
CTCAAAGCGC CGAACCGCTA 501 TCAAAGCCTG GGCGGGCGCG TGCCGCGCGG
CATCCTGCTG GCGGGCAGCC 551 CGGGTACGGG TAAGACGCTT TTGGCGAAAG
CGATTGCAGG CGAAGCCGGC 601 GTGCCGTTCT TCAGCATTTC AGGTTCCGAC
TTTGTCGAAA TGTTCGTCGG 651 TGTCGGTGCA AGCCGCGTCC GCGATATGTT
CGAGCAGGCG AAGAAAAACG 701 CCCCCTGCAT CATCTTTATC GACGAGATTG
ACGCAGTCGG CCGCCAACGC 751 GGCGCAGGTT TGGGCGGCGG TAATGATGAG
CGCGAGCAAA CATTAAACCA 801 ATTGTTGGTT GAAATGGACG GTTTTGAGAG
CAATCAGACT GTAATTGTGA 851 TTGCGGCAAC CAACCGCCCC GACGTACTCG
ATCCTGCGCT GCAACGCCCC 901 GGCCGTTTCG ACCGCCAAGT GGTTGTCCCC
CTGCCGGACA TCCGGGGGCG 951 CGAACAGATT TTGAACGTCC ACTCTAAAAA
AGTGCCTTTG GACAAATCTG 1001 TGGATTTATT GTCCCTCGCG CGCGGCACGC
CGGGTTTTTC CGGCGCGGAT 1051 TTGGCGAACT TGGTCAACGA AGCCGCCCTG
TTTGCCGGCC GCCGCAATAA 1101 AGTCAAAGTC GATCAGAGCG ATTTGAAGAC
GCCAAAGACA AAATCTATAT 1151 GGGTCCGGAA CGCCGCAGTA TGGTGA
This corresponds to the amino acid sequence <SEQ ID 1966; ORF
614.a>:
TABLE-US-02351 a614.pep 1 MAAFNALDGK KEDNGQIEYS QFIQQVNNGE
VSGVNIEGSV VSGYLIKGER 51 TDKSTFFTNA PLDDNLIKTL LDKNVRVKVT
PEEKPSALAA LFYSLLPVLL 101 LIGAWFYFMR MQTGGGGKGG AFSFGKSRAR
LLDKDANKVT FADVAGCDEA 151 KEEVQEIVDY LKAPNRYQSL GGRVPRGILL
AGSPGTGKTL LAKAIAGEAG 201 VPFFSISGSD FVEMFVGVGA SRVRDMFEQA
KKNAPCIIFI DEIDAVGRQR 251 GAGLGGGNDE REQTLNQLLV EMDGFESNQT
VIVIAATNRP DVLDPALQRP 301 GRFDRQVVVP LPDIRGREQI LNVHSKKVPL
DKSVDLLSLA RGTPGFSGAD 351 LANLVNEAAL FAGRRNKVKV DQSDLKTPKT
KSIWVRNAAV W* m614/a614 99.7% identity in 391 aa overlap 10 20 30
40 50 60 m614.pep
MAAFNALDGKKEDNGQIEYSQFIQQVNNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a614
MAAFNALDGKKEDNGQIEYSQFIQQVNNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNA 10 20
30 40 50 60 70 80 90 100 110 120 m614.pep
PLDDNLIKTLLDKNVRVKVTPEEKPSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a614
PLDDNLIKTLLDKNVRVKVTPEEKPSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGG 70 80
90 100 110 120 130 140 150 160 170 180 m614.pep
AFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a614
AFSFGKSRARLLDKDANKVTFADVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILL 130
140 150 160 170 180 190 200 210 220 230 240 m614.pep
AGSPGTGKTLLAKAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a614
AGSPGIGKILLAKAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFI 190
200 210 220 230 240 250 260 270 280 290 300 m614.pep
DEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a614
DEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRP 250
260 270 280 290 300 310 320 330 340 350 360 m614.pep
GRFDRQVVVPLPDIRGREQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAAL
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| a614
GRFDRQVVVPLPDIRGREQILNVHSKKVPLDKSVDLLSLARGTPGFSGADLANLVNEAAL 310
320 330 340 350 360 370 380 390 m614.pep
FAGRRNKVKVDQSDLKTPKTKSIWVRNAAVWX ||||||||||||||||||||||||||||||||
a614 FAGRRNKVKVDQSDLKTPKTKSIWVRNAAVWX 370 380 390
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1967>:
TABLE-US-02352 g615.seq 1 ATGTGGAAAC GGCGGCGGCG CGGTGtcggC
AGCTTtgaag agcagcGaAT 51 agatgCCGCC GGCAAACCAC AATGCGGAAa
gcaggCtgaa gcGGTTgcgC 101 GGCagcTTca tGCCGCCTCC TcGTCCaGCC
ACGtttGgca gattttggac 151 aggcgcAGga ATTTGCcgCc gcgtgcggCA
agtatgtcgc gcCAttgtgc 201 cacttcttcg gcggacggTG cttcgtcgaT
gctgCATTCG TACagcagga 251 aatcgagggt ttcttcgatg acggGgatgg
AttccgTTTG GataAgCTgc 301 ttgagttcgt tcatgactGt TCgGATAcgg
aaatcgggaa aatgccgtct 351 gAaagggctt CAGACGGCat tggATTATTT
GCTGTGCAGG AAgcgcgttg 401 cctcttccca tttgcCGGAA AtgATGTCGg
gtacggcctg cAGGGATttg 451 gCGACGGcat cgtcgatttg ccgGcggtgc
ttCcgcgctc ggtttGTTca 501 agacgtagcc gaCGACGagg ttgcggtcGC
CGGGGtggcC GATGCCGAGG 551 CGCAGGCGGt aatagtctgC CGTGCCGAGT
TTTGCctgAA TGTCTTTCAA 601 GCCGTTGTGT CcgcCGttgc cgcCGCCGAG
TTTGAATTTg ATCCGTCCGC 651 AAGGGATGTC GAGTTCGTCG TGGACGACGA
GGATTTCTTC GGGTTTGATT 701 TTGTAGAACT GTGCAAGCGC GGCAACCGCC
TGTCCGGAAC GGTTCATGAA 751 CGTGGCCGGT TTGAGCAGCC AAACATCGCC
GTCGGGCAGG GCGGCGCGGG 801 CAACTTCGCC GAAGAATTTT TTTTCTTCTT
TAAACGAAGC CTTCCATTTC 851 CACGCCAGTT CGTCGAGGAA CCAAAAGCCC
GCATTGTGGC GGGTCTGTTC 901 GTATTCTTTG CCCGGGTTGC CCAAGCCGAC
AACCATTTTG ATTGTGttcg 951 acatgataTT TtccgtgTTT CTgTCGaatg
cggtCtgaAG GCTTCAGacg 1001 gcatggTtaT TCTTCTTgaT TTtgaACgcg
tgtgcggCGC GCTTCTTTGG 1051 GGTCGATCAA CAGCGGGCGG TACACTTCGA
TGCGGTCGCC GTCGCGCAGC 1101 GGCGTGTCGT CTTTGA
This corresponds to the amino acid sequence <SEQ ID 1968: ORF
615.ng>:
TABLE-US-02353 g615.pep 1 MWKRRRRGVG SFEEQRIDAA GKPQCGKQAE
AVARQLHAAS SSSHVWQILD 51 RRRNLPPRAA SMSRHCATSS ADGASSMLHS
YSRKSRVSSM TGMDSVWISC 101 LSSFMTVRIR KSGKCRLKGL QTALDYLLCR
KRVASSHLPE MMSGTACRDL 151 ATASSICRRC FRARFVQDVA DDEVAVAGVA
DAEAQAVIVC RAEFCLNVFQ 201 AVVSAVAAAE FEFDPSARDV EFVVDDEDFF
GFDFVELCKR GNRLSGTVHE 251 RGRFEQPNIA VGQGGAGNFA EEFFFFFKRS
LPFPRQFVEE PKARIVAGLF 301 VFFARVAQAD NHFDCVRHDI FRVSVECGLK
ASDGMVILLD FERVCGALLW 351 GRSTAGGTLR CGRRRAAACR L*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1969>:
TABLE-US-02354 m615.seq Length: 1116 1 ATGCGGAAAA GGCGGTGGCG
CGGTTTCGGC AGCTTTGAAA AGCAGTGAGT 51 AAATGCTGCC TGCAAACCAC
AATGCCGAGA GCAGGATAAA GCGGTTGCGT 101 GGCAGATTCA TGCTTGTTCC
TCTTCAAGCC ATGTCTGGCA TAGTTTGGAT 151 AGGCGCAGGA ATTTTCCGCC
GCGTGCGGCC AGCATATCGC GCCAAACGGC 201 AATTTCTTCG GCGGAGGGGG
CATCGTCTAT GCTGCATTCG TAGAGCAGGA 251 AATCGAGGGT TTCTTCGATG
ACGGGGATGG ATTCGGTTTG GATAAGCTGC 301 TTGAGTTCGG TCATGACTGT
TCGGATATGG AAATCGGGAA CATGCCGTCT 351 GAAAGGGCTT CAGACGGCAT
CGGGTCATTT GCTGTGCAGG AAGCGGGTTG 401 CTTCTTCCCA TTTGCCGGCA
AGGATGTCGG GTATGGCTTG CAGGGATTTG 451 GCGACGGCAT CGTCAATCTG
TCGGCGGTGT .TCCGTACTG GGTTTGTTCA 501 GGACATAGCC GACGACGAGG
TTGCGGTCGC CCGGGTGGCC GATGCCGAGG 551 CGCAGGCGGT AATAGTCTGC
CGTGCCGAGT TTTGCCTGAA TGTCTTTCAA 601 GCCGTTGTGT CCGCCGTTGC
CGCCGCCGAG TTTGAATTTG ATCCGTCCGC 651 AGGGAATGTC GAGTTCGTCG
TGGACGACGA GGATTTCTTC GGGTTTGATT 701 TTGTAGAACT GTGCAAGCGC
GGCAACTGCC TGTCCGGAAC GGTTCATGAA 751 CGTGGCAGGT TTGAGCAGCC
AAACGTCGCC GTCGGGCAGG GCGGCACGGG 801 CGACTTCGCC GAAGAATTTT
TTTTCTTCTT TAAATGAAGC CTTCCATTTC 851 CACGCCAGTT CGTCGAGGAA
CCAAAAACCC GCATTGTGGC GTGTCTGTTC 901 GTATTCTTTG CCCGGGTTGC
CCAAGCCGAC AACCATTTTG ATTGTGTTTG 951 ACATGATATT TTCCGTGTTT
CTGTCGAATG CTGTCTGAAG GCTTCAGACG 1001 GCATGGTTAT TCTTCTTGAT
TTTGAACGCG TTTGCGGCGC GCTTCTTTGG 1051 GGTCGATCAA CAGCGGGCGG
TACACTTCGA TGCGGTCGCC GTCGCGCAGC 1101 GGCGTGTCGT CTTTGA
This corresponds to the amino acid sequence <SEQ ID 1970; ORF
615>:
TABLE-US-02355 m615.pep Length: 372 1 MRKRRWRGFG SFEKQXVNAA
CKPQCREQDK AVAWQIHACS SSSHVWHSLD 51 RRRNFPPRAA SISRQTAISS
AEGASSMLHS XSRKSRVSSM TGMDSVWISC 101 LSSVMTVRIW KSGTCRLKGL
QTASGHLLCR KRVASSHLPA RMSGMACRDL 151 ATASSICRRC XRTGFVQDIA
DDEVAVARVA DAEAQAVIVC RAEFCLNVFQ 201 AVVSAVAAAE FEFDPSAGNV
EFVVDDEDFF GFDFVELCKR GNCLSGTVHE 251 RGRFEQPNVA VGQGGTGDFA
EEFFFFFKXS LPFPRQFVEE PKTRIVACLF 301 VFFARVAQAD NHFDCVXHDI
FRVSVECCLK ASDGMVILLD FERVCGALLW 351 GRSTAGGTLR CGRRRAAACR L*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02356 m615/g615 86.8% identity in 371 aa overlap 10 20 30
40 50 60 m615.pep
MRKRRWRGFGSFEKQXVNAACKPQCREQDKAVAWQIHACSSSSHVWHSLDRRRNFPPRAA | |||
|| ||||:| ::|| |||| :| :||| |:|| |||||||: ||||||:||||| g615
MWKRRRRGVGSFEEQRIDAAGKPQCGKQAEAVARQLHAASSSSHVWQILDRRRNLPPRAA 10 20
30 40 50 60 70 80 90 100 110 120 m615.pep
SISRQTAISSAEGASSMLHSXSRKSRVSSMTGMDSVWISCLSSVMTVRIWKSGTCRLKGL |:||:
| |||:|||||||| |||||||||||||||||||||| ||||| ||| |||||| g615
SMSRHCATSSADGASSMLHSYSRKSRVSSMTGMDSVWISCLSSFMTVRIRKSGKCRLKGL 70 80
90 100 110 120 130 140 150 160 170 180 m615.pep
QTASGHLLCRKRVASSHLPARMSGMACRDLATASSICRRCXRTGFVQDIADDEVAVARVA |||
:||||||||||||| ||| ||||||||||||||| |: ||||:|||||||| || g615
QTALDYLLCRKRVASSHLPEMMSGTACRDLATASSICRRCFRARFVQDVADDEVAVAGVA 130
140 150 160 170 180 190 200 210 220 230 240 m615.pep
DAEAQAVIVCRAEFCLNVFQAVVSAVAAAEFEFDPSAGNVEFVVDDEDFFGFDFVELCKR
||||||||||||||||||||||||||||||||||||| :||||||||||||||||||||| g615
DAEAQAVIVCRAEFCLNVFQAVVSAVAAAEFEFDPSARDVEFVVDDEDFFGFDFVELCKR 190
200 210 220 230 240 250 260 270 280 290 300 m615.pep
GNCLSGTVHERGRFEQPNVAVGQGGTGDFAEEFFFFFKXSLPFPRQFVEEPKTRIVACLF ||
|||||||||||||||:||||||:|:|||||||||| |||||||||||||:|||| || g615
GNRLSGTVHERGRFEQPNIAVGQGGAGNFAEEFFFFFKRSLPFPRQFVEEPKARIVAGLF 250
260 270 280 290 300 310 320 330 340 350 360 m615.pep
VFFARVAQADNHFDCVXHDIFRVSVECCLKASDGMVILLDFERVCGALLWGRSTAGGTLR
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| g615
VFFARVAQADNHFDCVRHDIFRVSVECGLKASDGMVILLDFERVCGALLWGRSTAGGTLR 310
320 330 340 350 360 370 m615.pep CGRRRAAACRLX |||||||||||| g615
CGRRRAAACRLX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1971>:
TABLE-US-02357 a615.seq 1 ATGCGGAAAC GGCGGCGGCG CGGTGTCGGC
AGCTTTGAAG AGCAGCGAAT 51 AGATGCCGCC GGCAAACCAC AATGCGGAAA
GCAGGCTGAA GCGGTTGCGC 101 GGCAGCTTCA TGCCGCCTCC TCGTCCAGCC
ACGTTTGGCA GATTTTGGAC 151 AGGCGCAGGA ATTTGCCGCC GCGTGCGGCA
AGTATGTCGC GCCATTGTGC 201 CACTTCTTCG GCGGATGGTG CGTCGTCGAT
GCTGCATTCG TACAGCAGGA 251 AATCGAGGGT TTCTTCGATG ACGGGGATGG
ATTCGGTTTG GATAAGCTGC 301 TTGAGTTCGG TCATGACTGT TCGGATATGG
AAATCGGGAA CATGCCGTCT 351 GAAAGGGCTT CAGACGGCAT CGGGTCATTT
GCTGTGCAGG AAGCGGGTTG 401 CCTCTTCACA TTTGCCGGCA AGGATGTCGG
GTATGGCTTG CAGGGATTTG 451 GCGACGGCAT CGTCAATCTG TCGGCGGTG.
TTCCGTACTG GGTTTGTTCA 501 GGACATAGCC GACGACGAGG TTGCGGTCGC
CCGGGTGGCC GATGCCGAGG 551 CGCAGGCGGT AATAGTCTGC CGTGCCGAGT
TTTGCCTGAA TGTCTTTCAA 601 GCCGTTGTGT CCACCGTTGC CGCCGCCGAG
TTTGAATTTG ATCCGTCCGC 651 AGGGAATGTC GAGTTCGTCG TGGACGACGA
GGATTTCTTC GGGTTTGATT 701 TTATAAAACT GCGCAAGGGC GGCAACTGCC
TGTCCGGAAC GGTTCATGAA 751 CGTGGTCGGC TTGAGCAGCC AGACATCGCC
GTCGGGCAGG GTAGCACGGG 801 CGACTTCGCC GAAGAATTTT TTTTCTTCTT
TAAATGAAGC CTTCCATTTC 851 CACGCCAGTT CGTCGAGGAA CCAAAAACCC
GCATTGTGGC GTGTCTGTTC 901 GTATTCTTTG CCCGGGTTGC CCAAGCCGAC
AACCATTTTG ATTGTGTTTG 951 ACATGATATT TTCCGTGTTT CTGCCGAATG
CCGTCTGAAG GCTTCAGACG 1001 GCATGGTTAT TCTTCTTGAT TTTGAACGCG
TTTGCGGCGC GCTTCTTTGG 1051 GGTCGATCAA CAGCGGGCGG TACACTTCGA
TGCGGTCGCC GTCGCGCAGC 1101 GGCGTGTCGT CTTTGA
This corresponds to the amino acid sequence <SEQ ID 1972; ORF
615.a>:
TABLE-US-02358 a615.pep 1 MRKRRRRGVG SFEEQRIDAA GKPQCGKQAE
AVARQLHAAS SSSHVWQILD 51 RRRNLPPRAA SMSRHCATSS ADGASSMLHS
YSRKSRVSSM TGMDSVWISC 101 LSSVMTVRIW KSGTCRLKGL QTASGHLLCR
KRVASSHLPA RMSGMACRDL 151 ATASSICRRX FRTGFVQDIA DDEVAVARVA
DAEAQAVIVC RAEFCLNVFQ 201 AVVSTVAAAE FEFDPSAGNV EFVVDDEDFF
GFDFIKLRKG GNCLSGTVHE 251 RGRLEQPDIA VGQGSTGDFA EEFFFFFK*S
LPFPRQFVEE PKTRIVACLF 301 VFFARVAQAD NHFDCV*HDI FRVSAECRLK
ASDGMVILLD FERVCGALLW 351 GRSTAGGTLR CGRRRAAACR L* m615/a615 90.3%
identity in 371 aa overlap 10 20 30 40 50 60 m615.pep
MRKRRWRGFGSFEKQXVNAACKPQCREQDKAVAWQIHACSSSSHVWHSLDRRRNFPPRAA |||||
|| ||||:| ::|| |||| :| :||| |:|| |||||||: ||||||:||||| a615
MRKRRRRGVGSFEEQRIDAAGKPQCGKQAEAVARQLHAASSSSHVWQILDRRRNLPPRAA 10 20
30 40 50 60 70 80 90 100 110 120 m615.pep
SISRQTAISSAEGASSMLHSXSRKSRVSSMTGMDSVWISCLSSVMTVRIWKSGTCRLKGL |:||:
| |||:|||||||| ||||||||||||||||||||||||||||||||||||||| a615
SMSRHCATSSADGASSMLHSYSRKSRVSSMTGMDSVWISCLSSVMTVRIWKSGTCRLKGL 70 80
90 100 110 120 130 140 150 160 170 180 m615.pep
QTASGHLLCRKRVASSHLPARMSGMACRDLATASSICRRCXRTGFVQDIADDEVAVARVA
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| a615
QTASGHLLCRKRVASSHLPARMSGMACRDLATASSICRRXFRTGFVQDIADDEVAVARVA 130
140 150 160 170 180 190 200 210 220 230 240 m615.pep
DAEAQAVIVCRAEFCLNVFQAVVSAVAAAEFEFDPSAGNVEFVVDDEDFFGFDFVELCKR
||||||||||||||||||||||||:|||||||||||||||||||||||||||||::| | a615
DAEAQAVIVCRAEFCLNVFQAVVSTVAAAEFEFDPSAGNVEFVVDDEDFFGFDFIKLRKG 190
200 210 220 230 240 250 260 270 280 290 300 m615.pep
GNCLSGTVHERGRFEQPNVAVGQGGTGDFAEEFFFFFKXSLPFPRQFVEEPKTRIVACLF
|||||||||||||:|||::|||||:||||||||||||||||||||||||||||||||||| a615
GNCLSGTVHERGRLEQPDIAVGQGSTGDFAEEFFFFFKXSLPFPRQFVEEPKTRIVACLF 250
260 270 280 290 300 310 320 330 340 350 360 m615.pep
VFFARVAQADNHFDCVXHDIFRVSVECCLKASDGMVILLDFERVCGALLWGRSTAGGTLR
||||||||||||||||||||||||:|| |||||||||||||||||||||||||||||||| a615
VFFARVAQADNHFDCVXHDIFRVSAECRLKASDGMVILLDFERVCGALLWGRSTAGGTLR 310
320 330 340 350 360 370 m615.pep CGRRRAAACRLX |||||||||||| a615
CGRRRAAACRLX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1973>:
TABLE-US-02359 g616.seq 1 atgtcgaaCA CAATCAAAAT GGTTGTCGGC
TTGGGCAACC CGGGCAAAGA 51 ATACGAACAG ACCCGCCACA ATGCGGGCTT
TTGGTTCCTC GACGAACTGG 101 CGTGGAAATG GAAGGCTTCG TTTAAAGAAG
AAAAAAAATT CTTCGGCGAA 151 GTTGCCCGCG CCGCCCTGCC CGACGGCGAT
GTTTGGCTGC TCAAACCGGC 201 CACGTTCATG AACCGTTCCG GACAGGCGGT
TGCCGCGCTT GCACAGTTCT 251 ACAAAATCAA ACCCGAAGAA ATCCTCGTCG
TCCACGACGA ACTCGACATC 301 CCTTGCGGAC GGATcAAATT CAAACTCGGC
GgcggcaaCG gcgGACACAA 351 CGGCTTGAAA GACATTcagG CAAAACTCGG
CACGGcagac tattaCCGCC 401 TGCGCCTCGG CATCGgccaC CCCGGCgacc
gcaacctCGT CGtcggctac 451 gtcttgAACa aaccgagcgc gGaagcaccg
Ccggcaaatc gacgatgCCG 501 TCGccaaATC CCTgcaggcc gtaccCGACA
TcaTTTCCGg caaatgggaa 551 gaggcaacgc gcTTCCTGCA CAGCAAATAA
TccaatGCCG TCTGaagccc 601 ttTcagacgg cattttcccg atttccgTAT
CcGAaCagtc atgaacgaac 651 tcaagcAGcT tatCCAAAcg gaaTccatcC
ccgtcatcga agaaaccctc 701 gatttcctgc tGTACGAATG cagcAtcgac
gaagCAccgt ccgccgaaga 751 agtggcacaa TGgcgcgaca tactTGccgc
acgcgGcgGC AAATtcCTgc 801 gcctgtccaa aatctgcCaa aCGTGGCtGG
ACgAGGAGGC GGCatgAAgc 851 tGCCGcgcAA CCgcttcaGc ctgctTTCCG
CATTGTGGTT TGCCGGCGGc 901 atctATtCgc tgctcttcaA AGCTGccgaC
ACCGCGCCGC CGCCGTTTCC 951 ACATTtcgaC AAAGCAGCAC ACCTTGCCCT
GTTTTTCGCA CAaatCTTgt 1001 tTctGGCCAA AGCATTCAAA ACCGGAAAAC
TTCCCATCCC CTACCGCAGC 1051 CTGATTGCGT TCGCCTTCTG TTTTGCCGTC
GGCAGCGAAT GCGCGCAGGC 1101 ATGGTTTACC GCAACGCGAA CCGGCAGTTT
GGGCGATGTC CTTGCCgACC 1151 TGACGGGCGC AGCCCTTGCC CTCTTTGCCG
CGCGTTCTGC CTGCCGcccg 1201 gactaa
This corresponds to the amino acid sequence <SEQ ID 1974: ORF
616.ng>:
TABLE-US-02360 g616.pep 1 MSNTIKMVVG LGNPGKEYEQ TRHNAGFWFL
DELAWKWKAS FKEEKKFFGE 51 VARAALPDGD VWLLKPATFM NRSGQAVAAL
AQFYKIKPEE ILVVHDELDI 101 PCGRIKFKLG GGNGGHNGLK DIQAKLGTAD
YYRLRLGIGH PGDRNLVVGY 151 VLNKPSAEAP PANRRCRRQI PAGRTRHHFR
QMGRGNALPA QQIIQCRLKP 201 FQTAFSRFPY PNSHERTQAA YPNGIHPRHR
RNPRFPAVRM QHRRSTVRRR 251 SGTMARHTCR TRRQIPAPVQ NLPNVAGRGG
GMKLPRNRFS LLSALWFAGG 301 IYSLLFKAAD TAPPPFPHFD KAAHLALFFA
QILFLAKAFK TGKLPIPYRS 351 LIAFAFCFAV GSECAQAWFT ATRTGSLGDV
LADLTGAALA LFAARSACRP 401 D*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1975>:
TABLE-US-02361 m616.seq 1 ATGTCAAACA CAATCAAAAT GGTTGTCGGC
TTGGGCAACC CGGGCAAAGA 51 ATACGAACAG ACACGCCACA ATGCGGGTTT
TTGGTTCCTC GACGAACTGG 101 CGTGGAAATG GAAGGCTTCA TTTAAAGAAG
AAAAAAAATT CTTCGGCGAA 151 GTCGCCCGTG CCGCCCTGCC CGACGGCGAC
GTTTGGCTGC TCAAACCTGC 201 CACGTTCATG AACCGTTCCG GACAGGCAGT
TGCCGCGCTT GCACAGTTCT 251 ACAAAATCAA ACCCGAAGAA ATCCTCGTCG
TCCACGACGA ACTCGACATT 301 CCCTGCGGAC GGATCAAATT CAAACTCGGC
GGCGGCAACG GCGGACACAA 351 CGGCTTGAAA GACATTCAGG CAAAACTCGG
CACGGCAGAC TATTACCGCC 401 TGCGCCTCGG CATCGGCCAC CCGGGCGACC
GCAACCTCGT CGTCGGCTAT 451 GTCCTGAACA AACCCAGTAC GGAACA.CCG
CCGACAGATT GACGATGCCG 501 TCGCCAAATC CCTGCAAGCC ATACCCGACA
TCCTTGCCGG CAAATGGGAA 551 GAAGCAACCC GCTTCCTGCA CAGCAAATGA
CCCGATGCCG TCTGAAGCCC 601 TTTCAGACGG CATGTTCCCG ATTTCCATAT
CCGAACAGTC ATGACCGAAC 651 TCAAGCAGCT TATCCAAACC GAATCCATCC
CCGTCATCGA AGAAACCCTC 701 GATTTCCTGC TCTACGAATG CAGCATAGAC
GATGCCCCCT CCGCCGAAGA 751 AATTGCCGTT TGGCGCGATA TGCTGGCCGC
ACGCGGCGGA AAATTCCTGC 801 GCCTATCCAA ACTATGCCAG ACATGGCTTG
AAGAGGAACA AGCATGAATC 851 TGCCACGCAA CCGCTTTATC CTGCTCTCGG
CATTGTGGTT TGCAGGCAGC 901 ATTTACTCAC TGCTTTTCAA AGCTGCCGAA
ACCGCGCCAC CGCCTTTTCC 951 GCATTTTGAC AAAGTGGCGC ACCTCGCCCT
GTTTTTCGCA CAAATCTGGC 1001 TTCTGACCAA AGCATTCAGA ACCGACAACC
GCCCCATCCC CTATCGCAGC 1051 CTGATGGTCT TTGCCCTCTG TTTCGCCCTC
TTCAGCGAAT GCGCGCAGGC 1101 ATGGTTTACC GCAACGAGAA CCGGCAGTTT
GGGCGATGTC CTTGCCGACC 1151 TGACGGGCGC AGCCCTTGCC CTCTTTACCG
CGCGAGCTGC CTGCCGCCCG 1201 GACTAA
This corresponds to the amino acid sequence <SEQ ID 1976: ORF
616>:
TABLE-US-02362 m616.pep 1 MSNTIKMVVG LGNPGKEYEQ TRHNAGFWFL
DELAWKWKAS FKEEKKFFGE 51 VARAALPDGD VWLLKPATFM NRSGQAVAAL
AQFYKIKPEE ILVVHDELDI 101 PCGRIKFKLG GGNGGHNGLK DIQAKLGTAD
YYRLRLGIGH PGDRNLVVGY 151 VLNKPSTEXP PTDXRCRRQI PASHTRHPCR
QMGRSNPLPA QQMTRCRLKP 201 FQTACSRFPY PNSHDRTQAA YPNRIHPRHR
RNPRFPALRM QHRRCPLRRR 251 NCRLARYAGR TRRKIPAPIQ TMPDMAXRGT
SMNLPRNRFI LLSALWFAGS 301 IYSLLFKAAE TAPPPFPHFD KVAHLALFFA
QIWLLTKAFR TDNRPIPYRS 351 LMVFALCFAL FSECAQAWFT ATRTGSLGDV
LADLTGAALA LFTARAACRP 401 D* m616/g616 86.0% identity in 401 aa
overlap 10 20 30 40 50 60 m616.pep
MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g616
MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGD 10 20
30 40 50 60 70 80 90 100 110 120 m616.pep
VWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g616
VWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK 70 80
90 100 110 120 130 140 150 160 170 180 m616.pep
DIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEXPPTDXRCRRQIPASHTRHPCR
||||||||||||||||||||||||||||||||||||:| ||:: ||||||||::||| | g616
DIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEAPPANRRCRRQIPAGRTRHHFR 130
140 150 160 170 180 190 200 210 220 230 240 m616.pep
QMGRSNPLPAQQMTRCRLKPFQTACSRFPYPNSHDRTQAAYPNRIHPRHRRNPRFPALRM ||||:|
|||||: :||||||||| |||||||||:|||||||| |||||||||||||:|| g616
QMGRGNALPAQQIIQCRLKPFQTAFSRFPYPNSHERTQAAYPNGIHPRHRRNPRFPAVRM 190
200 210 220 230 240 250 260 270 280 290 300 m616.pep
QHRRCPLRRRNCRLARYAGRTRRKIPAPIQTMPDMAXRGTSMNLPRNRFILLSALWFAGS ||||
:|||: :||:: ||||:||||:|::|::| || :|:|||||| |||||||||: g616
QHRRSTVRRRSGTMARHTCRTRRQIPAPVQNLPNVAGRGGGMKLPRNRFSLLSALWFAGG 250
260 270 280 290 300 310 320 330 340 350 360 m616.pep
IYSLLFKAAETAPPPFPHFDKVAHLALFFAQIWLLTKAFRLDNRPIPYRSLMVFALCFAL
|||||||||:|||||||||||:|||||||||| :|:|||:| : ||||||::||:|||: g616
IYSLLFKAADTAPPPFPHFDKAAHLALFFAQILFLAKAFKTGKLPIPYRSLIAFAFCFAV 310
320 330 340 350 360 370 380 390 400 m616.pep
FSECAQAWFTATRTGSLGDVLADLTGAALALFTARAACRPDX
|||||||||||||||||||||||||||||||:||:|||||| g616
GSECAQAWFTATRTGSLGDVLADLTGAALALFAARSACRPDX 370 380 390 400
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1977>:
TABLE-US-02363 a616.seq 1 ATGTCAAACA CAATCAAAAT GGTTGTCGGC
TTGGGCAACC CGGGCAAAGA 51 ATACGAACAG ACACGCCACA ATGCGGGTTT
TTGGTTCCTC GACGAACTGG 101 CGTGGAAATG GAAGGCTTCA TTTAAAGAAG
AAAAAAAATT CTTCGGCGAA 151 GTCGCCCGTG CTACCCTGCC CGACGGCGAT
GTCTGGCTGC TCAAGCCGAC 201 CACGTTCATG AACCGTTCCG GACAGGCAGT
TGCCGCCCTT GCGCAGTTTT 251 ATAAAATCAA ACCCGAAGAA ATCCTCGTCG
TCCACGACGA ACTCGACATT 301 CCCTGCGGAC GGATCAAATT CAAACTCGGC
GGCGGCAACG GTGGACACAA 351 CGGCTTGAAA GACATTCAGG CAAAACTCGG
CACGGCAGAC TATTACCGCC 401 TGCGCCTCGG CATCGGCCAC CCGGGCGACC
GCAACCTCGT CGTCGGCTAT 451 GTCCTGAACA AACCCAGTAC GGAA.CACCG
CCGACAGATT GACGATGCCG 501 TCGCCAAATC CCTGCAAGCC ATACCCGACA
TCCTTGCCGG CAAATGTGAA 551 GAGGCAACCC GCTTCCTGCA CAGCAAATGA
CCCGATGCCG TCTGAAGCCC 601 TTTCAGACGG CATGTTCCCG ATTTCCATAT
CCGAACAGTC ATGACCGAAC 651 TCAAGCAGCT TATCCAAACC GAATCCATCC
CCGTCATCGA AGAAACCCTC 701 GATTTCCTGC TGTACGAATG CAGCATCGAC
GACGCACCAT CCGCCGAAGA 751 AGTGGCACAA TGGCGCGACA TACTTGCCGC
ACGCGGCGGC AAATTCCTGC 801 GCCTGTCCAA AATCTGCCAA ACGTGGCTGG
ACGAGGAGGC GGCATGAAGC 851 TGCCGCGCAA CCGCTTCAGC CTGCTTTCCG
CATTGTGGTT TGCCGGCGGC 901 ATCTATTCGC TGCTCTTCAA AGCTGCCGAC
ACCGCGCCGC CGCCGTTTCC 951 GCATTTCGAC AAAGCAGCAC ACCTTGCCCT
GTTTTTCGCA CAAATCTGGC 1001 TTTTGACCAA AGCATTCAAA ACCGGAAAAC
TTCCCATCCC CTACCGCAGC 1051 CTGATGGTCT TTGCCCTCTG TTTCGCCCTC
TTCAGCGAAT GCGCGCAGGC 1101 ATGATTTACC GCAACGAGAA CCGGCAGTTT
GGGCGATGTT CTTGCCGATA 1151 TGGCAGGTAC GGTTCTCGCA CTCTTTGCCG
CCCGCGCCGC CGACCGCCCG 1201 GACTGA
This corresponds to the amino acid sequence <SEQ ID 1978; ORF
616.a>:
TABLE-US-02364 a616.pep 1 MSNTIKMVVG LGNPGKEYEQ TRHNAGFWFL
DELAWKWKAS FKEEKKFFGE 51 VARATLPDGD VWLLKPTTFM NRSGQAVAAL
AQFYKIKPEE ILVVHDELDI 101 PCGRIKFKLG GGNGGHNGLK DIQAKLGTAD
YYRLRLGIGH PGDRNLVVGY 151 VLNKPSTEXP PTD*RCRRQI PASHTRHPCR
QM*RGNPLPA QQMTRCRLKP 201 FQTACSRFPY PNSHDRTQAA YPNRIHPRHR
RNPRFPAVRM QHRRRTIRRR 251 SGTMARHTCR TRRQIPAPVQ NLPNVAGRGG
GMKLPRNRFS LLSALWFAGG 301 IYSLLFKAAD TAPPPFPHFD KAAHLALFFA
QIWLLTKAFK TGKLPIPYRS 351 LMVFALCFAL FSECAQA*FT ATRTGSLGDV
LADMAGTVLA LFAARAADRP 401 D* m616/a616 90.0% identity in 401 aa
overlap 10 20 30 40 50 60 m616.pep
MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGD
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a616
MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGD 10 20
30 40 50 60 70 80 90 100 110 120 m616.pep
VWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a616
VWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK 70 80
90 100 110 120 130 140 150 160 170 180 m616.pep
DIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEXPPTDXRCRRQIPASHTRHPCR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a616
DIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEXPPTDXRCRRQIPASHTRHPCR 130
140 150 160 170 180 190 200 210 220 230 240 m616.pep
QMGRSNPLPAQQMTRCRLKPFQTACSRFPYPNSHDRTQAAYPNRIHPRHRRNPRFPALRM ||
|:||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a616
QMXRGNPLPAQQMTRCRLKPFQTACSRFPYPNSHDRTQAAYPNRIHPRHRRNPRFPAVRM 190
200 210 220 230 240 250 260 270 280 290 300 m616.pep
QHRRCPLRRRNCRLARYAGRTRRKIPAPIQTMPDMAXRGTSMNLPRNRFILLSALWFAGS ||||
:|||: :||:: ||||:||||:|::|::| || :|:|||||| |||||||||: a616
QHRRRTIRRRSGTMARHTCRTRRQIPAPVQNLPNVAGRGGGMKLPRNRFSLLSALWFAGG 250
260 270 280 290 300 310 320 330 340 350 360 m616.pep
IYSLLFKAAETAPPPFPHFDKVAHLALFFAQIWLLTKAFRTDNRPIPYRSLMVFALCFAL
|||||||||:|||||||||||:|||||||||||||||||:| : |||||||||||||||| a616
IYSLLFKAADTAPPPFPHFDKAAHLALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFAL 310
320 330 340 350 360 370 380 390 400 m616.pep
FSECAQAWFTATRTGSLGDVLADLTGAALALFTARAACRPDX |||||||
|||||||||||||||::|::||||:|||| |||| a616
FSECAQAXFTATRTGSLGDVLADMAGTVLALFAARAADRPDX 370 380 390 400
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1979>:
TABLE-US-02365 g619.seq 1 ATGCCGTCTG AAAAAAATAT CGGTTTTATG
GCAGGAAGCA GCCGTCCGTT 51 GCGGGTCGCC TTTGCGCTGT TGCTGGTTTC
CTGCATCCTG TTTATGACGC 101 TCAACGTCAA AGGAGATTGG GACTTTGTCT
TGCACCTGCG CCTGACCAAG 151 CTTGCCGCGC TGCTGATGGT CGCCTATGCG
GTCGGCGTGT CCACTCAACT 201 CTTCCAAACG CTGACCAACA ACCCGATTCT
GACCCCTTCG ATTTTGGGTT 251 TCGATTCGCT GTATGTGTTT TTGCAGACCT
TGCTGgtGTT TACGTtcgGC 301 GGCGTGGGCT ATAcatccct gccgttgacg
gGCAAATTCG GCTTTGAACT 351 GGTTGTTATG ATGGGCGGCT CGCTGCTGCT
GTTTTACACG CTCATCCGTC 401 AGGGCGGGCG CGATTTGCCG CACATGATTT
TAATCGGCGT GATTTTCGGG 451 ATTTTGTTCC GCAGCCTTTC CTCGCTGCTT
TCGCGCATGA TAGACCCCGA 501 AGAATTTACC GCCGCGCAGG CGAATATGTT
TGCCGGATTC AATACCGTCC 551 GCAGCGAGCT TTTAGGCATA GGCGCGCTGG
TCCTGCTCGT CAGCGCGGCG 601 GTCGTTTGGC ACGAACGCTA CCGCTCGGAC
GTACACCTTT TGGGGCGCGA 651 CCAAGCCGTC AATTTGGGCA TCAGCTACAC
GCGCAACACC TTATGGATAC 701 TGCTTTGGAT TGCCGCATTG GTGGCGACGG
CGACCGCCGT TGTCGGCCCG 751 GTGAGCTTTT TCGGGCTTCT CGCCGCCTCG
CTTGCCAACC ACTTTTCCCc 801 gtCCGTGCGC CATTCCGTCC GCCTGCcgat
gacggtttGC gtcgGcggCA 851 TCCTCTTGgt cggCggacaA ACCGTATTCG
AACACTTCTT GGGCATGAag 901 gCggTATTAA GCGTGGTGGt cgAATTTGCG
ggcggactcG TTTTCCTCTA 951 TCTCGTTTTA AAACACAAAA AATGA
This corresponds to the amino acid sequence <SEQ ID 1980; ORF
619.a>:
TABLE-US-02366 g619.pep 1 MPSEKNIGFM AGSSRPLRVA FALLLVSCIL
FMTLNVKGDW DFVLHLRLTK 51 LAALLMVAYA VGVSTQLFQT LTNNPILTPS
ILGFDSLYVF LQTLLVFTFG 101 GVGYTSLPLT GKFGFELVVM MGGSLLLFYT
LIRQGGRDLP HMILIGVIFG 151 ILFRSLSSLL SRMIDPEEFT AAQANMFAGF
NTVRSELLGI GALVLLVSAA 201 VVWHERYRSD VHLLGRDQAV NLGISYTRNT
LWILLWIAAL VATATAVVGP 251 VSFFGLLAAS LANHFSPSVR HSVRLPMTVC
VGGILLVGGQ TVFEHFLGMK 301 AVLSVVVEFA GGLVFLYLVL KHKK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1981>:
TABLE-US-02367 m619.seq 1 ATGCCGTCTG AAAAAAATAT CGGTTTTATG
GCAGGAAGCA GCCGCCCGTT 51 GTGGGTCGCC TTTGCGCTGT TGCTGGTTTC
CTGCGTCCTG TTTATGACGC 101 TCAACGTCAA AGGCGATTGG GATTTTGTTT
TGCAACTGCG GCTGACCAAA 151 CTTGCCGCGC TGCTGATGGT CGCCTATGCG
GTCGGCGTGT CCACGCAACT 201 CTTCCAAACG CTGACCAATA ATCCGATTCT
GACCCCTTCA ATTTTGGGTT 251 TCGATTCGCT GTATGTGTTT TTGCAGACCT
TGCTGGTGTT TACGTTCGGC 301 GGCGTGGGCT ATGCTTCCCT GCCGTTGACG
GGCAAATTCG GCTTTGAACT 351 GGTCGTCATG ATGGGCGGCT CGCTGCTGCT
GTTCTACACG CTCATCAAAC 401 AGGGCGGACG CGATTTGTCG CGCATGATTT
TAATCGGCGT GATTTTCGGG 451 ATTTTGTTCC GCAGCCTGTC GTCGCTGCTT
TCGCGCATGA TCGATCCCGA 501 AGAATTTACC GCCGCGCAGG CGAATATGTT
TGCCGGATTC AATACCGTCC 551 ACAGCGAGCT TTTGGGCATA GGCGCGCTGA
TTCTGCTCGT CAGCGCGGCG 601 GTCGTTTGGC GCGAACGCTA CCGCTTGGAC
GTTTACCTTT TGGGGCGTGA 651 CCAAGCCGTC AATTTGGGCA TCAGCTACAC
GCGCAACACC TTATGGATAC 701 TGCTTTGGAT TGCCGCATTG GTGGCGACGG
CGACCGCCGT GGTCGGCCCC 751 GTAAGCTTTT TCGGGCTTCT CGCCGCCTCG
CTTGCCAACC ACTTTTCCCC 801 GTCGGTCAAA CATTCCGTCC GCCTGCCGAT
GACGGTTTGT ATCGGCGGCA 851 TCCTCTTGGT CGGCGGACAG ACCGTGTTCG
AACACCTGCT CGGTATGCAG 901 GCAGTGTTGA GCGTAGTAGT AGAATTTGCC
GGCGGACTCG TTTTCCTCTA 951 TCTCGTTTTA AAACACAAAA AATGA
This corresponds to the amino acid sequence <SEQ ID 1982: ORF
619>:
TABLE-US-02368 m619.pep 1 MPSEKNIGFM AGSSRPLWVA FALLLVSCVL
FMTLNVKGDW DFVLQLRLTK 51 LAALLMVAYA VGVSTQLFQT LTNNPILTPS
ILGFDSLYVF LQTLLVFTFG 101 GVGYASLPLT GKFGFELVVM MGGSLLLFYT
LIKQGGRDLS RMILIGVIFG 151 ILFRSLSSLL SRMIDPEEFT AAQANMFAGF
NTVHSELLGI GALILLVSAA 201 VVWRERYRLD VYLLGRDQAV NLGISYTRNT
LWILLWIAAL VATATAVVGP 251 VSFFGLLAAS LANHFSPSVK HSVRLPMTVC
IGGILLVGGQ TVFEHLLGMQ 301 AVLSVVVEFA GGLVFLYLVL KHKK* m619/g619
95.1% identity in 324 aa overlap 10 20 30 40 50 60 m619.pep
MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVLQLRLTKLAALLMVAYA
||||||||||||||||| ||||||||||:|||||||||||||||:||||||||||||||| g619
MPSEKNIGFMAGSSRPLRVAFALLLVSCILFMTLNVKGDWDFVLHLRLTKLAALLMVAYA 10 20
30 40 50 60 70 80 90 100 110 120 m619.pep
VGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGVGYASLPLTGKFGFELVVM
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| g619
VGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGVGYTSLPLTGKFGFELVVM 70 80
90 100 110 120 130 140 150 160 170 180 m619.pep
MGGSLLLFYLLIKQGGRDLSRMILIGVIFGILFRSLSSLLSRMIDPEEFTAAQANMFAGF
||||||||||||:|||||| :||||||||||||||||||||||||||||||||||||||| g619
MGGSLLLFYLLIRQGGRDLPHMILIGVIFGILFRSLSSLLSRMIDPEEFTAAQANMFAGF 130
140 150 160 170 180 190 200 210 220 230 240 m619.pep
NTVHSELLGIGALILLVSAAVVWRERYRLDVYLLGRDQAVNLGISYTRNTLWILLWIAAL
|||:|||||||||:|||||||||:|||| ||:|||||||||||||||||||||||||||| g619
NTVRSELLGIGALVLLVSAAVVWHERYRSDVHLLGRDQAVNLGISYTRNTLWILLWIAAL 190
200 210 220 230 240 250 260 270 280 290 300 m619.pep
VATATAVVGPVSFFGLLAASLANHFSPSVKHSVRLPMTVCIGGILLVGGQTVFEHLLGMQ
|||||||||||||||||||||||||||||:||||||||||:||||||||||||||:|||: g619
VATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLPMTVCVGGILLVGGQTVFEHFLGMK 250
260 270 280 290 300 310 320 m619.pep AVLSVVVEFAGGLVFLYLVLKHKKX
||||||||||||||||||||||||| g619 AVLSVVVEFAGGLVFLYLVLKHKKX 310
320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1983>:
TABLE-US-02369 a619.seq 1 ATGCCGTCTG AAAAAAATAT CGGTTTTATG
GCAGGAAGCA GCCGTCCGTT 51 GTGGGTTGCC TTTGCGCTGT TGCTGGTTTC
CTGCATCCTG TTTATGACGC 101 TCAACGTCAA AGGCGATTGG GATTTTGTTT
TGCACCTGCG CCTGACCAAG 151 CTTGCCGCGC TGCTGATGGT CGCCTATGCG
GTCGGCGTTT CGACCCAGCT 201 TTTTCAAACG CTGACCAACA ATCCGATTCT
GACCCCTTCG ATTTTGGGTT 251 TCGATTCGCT GTATGTGTTT TTGCAGACCT
TGCTGGTGTT TACGTTCGGC 301 GGCGTGGGCT ATGCTTCCCT GCCGTTGACG
GGCAAATTCG GCTTTGAACT 351 GGTCGTTATG ATGGGCGGCT CGCTGCTGCT
GTTTTACACG CTCATCAAAC 401 AGGGCGGGCG CGATTTGCCG CGTATGATTT
TAATCGGCGT GATTTTCGGG 451 ATTTTGTTCC GCAGCCTGTC GTCGCTGCTT
TCGCGCATGA TCGACCCCGA 501 AGAATTTACG GCGGCGCAGG CGAATATGTT
TGCCGGATTC AATACCGTCC 551 ACAGCGAGCT TTTAGGCATA GGCGCGCTGA
TTCTGCTCGT CAGCGCGGCG 601 GTCGTTTGGC GCGAACGCTA CCGCTTGGAC
GTACACCTTT TGGGGCGCGA 651 CCAAGCCATA AATTTGGGCA TCAGCTACAC
GCGCAACACC TTATGGATAC 701 TGCTTTGGAT TGCCGCGCTG GTGGCGACGG
CGACCGCCGT TGTCGGCCCG 751 GTAAGCTTTT TCGGGCTTCT CGCCGCCTCG
CTTGCCAACC ACTTTTCCCC 801 GTCGGTCAAA CATTCCGTCC GCCTGCCGAT
GACGGTTTGT GTCGGCGGCA 851 TCCTCTTGGT CGGCGGACAG ACCGTATTCG
AACACTTCTT GGGCATGAAG 901 GCGGTATTAA GCGTGGTGGT CGAATTTGCG
GGCGGACTCG TTTTCCTCTA 951 TCTCGTTTTA AGACACAAAA AATGA
This corresponds to the amino acid sequence <SEQ ID 1984; ORF
619.a>:
TABLE-US-02370 a619.pep 1 MPSEKNIGFM AGSSRPLWVA FALLLVSCIL
FMTLNVKGDW DFVLHLRLTK 51 LAALLMVAYA VGVSTQLFQT LTNNPILTPS
ILGFDSLYVF LQTLLVFTFG 101 GVGYASLPLT GKFGFELVVM MGGSLLLFYT
LIKQGGRDLP RMILIGVIFG 151 ILFRSLSSLL SRMIDPEEFT AAQANMFAGF
NTVHSELLGI GALILLVSAA 201 VVWRERYRLD VHLLGRDQAI NLGISYTRNT
LWILLWIAAL VATATAVVGP 251 VSFFGLLAAS LANHFSPSVK HSVRLPMTVC
VGGILLVGGQ TVFEHFLGMK 301 AVLSVVVEFA GGLVFLYLVL RHKK* m619/a619
97.2% identity in 324 aa overlap 10 20 30 40 50 60 m619.pep
MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVLQLRLTKLAALLMVAYA
||||||||||||||||||||||||||||:|||||||||||||||:||||||||||||||| a619
MPSEKNIGFMAGSSRPLWVAFALLLVSCILFMTLNVKGDWDFVLHLRLTKLAALLMVAYA 10 20
30 40 50 60 70 80 90 100 110 120 m619.pep
VGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGVGYASLPLTGKFGFELVVM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a619
VGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGVGYASLPLTGKFGFELVVM 70 80
90 100 110 120 130 140 150 160 170 180 m619.pep
MGGSLLLFYTLIKQGGRDLSRMILIGVIFGILFRSLSSLLSRMIDPEEFTAAQANMFAGF
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| a619
MGGSLLLFYTLIKQGGRDLPRMILIGVIFGILFRSLSSLLSRMIDPEEFTAAQANMFAGF 130
140 150 160 170 180 190 200 210 220 230 240 m619.pep
NTVHSELLGIGALILLVSAAVVWRERYRLDVYLLGRDQAVNLGISYTRNTLWILLWIAAL
|||||||||||||||||||||||||||||||:|||||||:|||||||||||||||||||| a619
NTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQAINLGISYTRNTLWILLWIAAL 190
200 210 220 230 240 250 260 270 280 290 300 m619.pep
VATATAVVGPVSFFGLLAASLANHFSPSVKHSVRLPMTVCIGGILLVGGQTVFEHLLGMQ
||||||||||||||||||||||||||||||||||||||||:||||||||||||||:|||: a619
VATATAVVGPVSFFGLLAASLANHFSPSVKHSVRLPMTVCVGGILLVGGQTVFEHFLGMK 250
260 270 280 290 300 310 320 m619.pep AVLSVVVEFAGGLVFLYLVLKHKKX
||||||||||||||||||||:|||| a619 AVLSVVVEFAGGLVFLYLVLRHKKX 310
320
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1985>:
TABLE-US-02371 g620.seq 1 ATGAAGAAAA CCCTGTTGGc AATTGTTGCC
gtTTTCGCCT TAAGTGCCTG 51 CCGGCaggcg gaAGaggcac cgccgCCTTT
ACCCCGGCAG AtTAGCGacc 101 gttcggtcgg aCACTAttgC Agtatgaacc
tgaccgaaca caacggcccc 151 aaagcccaga tttttttgaa cGGCAAACCC
GATCAGCCCG TTTGGTTCTC 201 CACCGTcaag cagatgttcg GCTATACCAA
GCTGCCCGAA GAGCCCAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCTAATG CCGACACGGA GTGGATAGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
CGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA GGAGCAGGCT GAAAAATTTG
CAAAGGATAA AGGCGGCAAG 451 GTCGTCGGTT TTGACGATAT GCCCGATGCT
TACATTTTCA AGTAA
This corresponds to the amino acid sequence <SEQ ID 1986; ORF
620.ng>:
TABLE-US-02372 g620.pep 1 MKKTLLAIVA VFALSACRQA EEAPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTVK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWID AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDA YIFK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1987>:
TABLE-US-02373 m620.seq 1 ATGAAAAAAA CCCTGTTGGC AATTGTTGCC
GTTTCCGCCT TAAGTGCCTG 51 CCGGCAGGCG GAAGAGGGAC CGCCGCCTTT
ACCCCGGCAG ATTAGCGACC 101 GTTCGGTCGG ACACTATTGC AGTATGAACC
TGACCGAACA CAACGGCCCC 151 AAAGCCCAGA TTTTCTTGAA CGGCAAACCC
GATCAGCCCG TTTGGTTCTC 201 CACCATCAAG CAGATGTTCG GCTATACCAA
GCTGCCCGAA GAGCCTAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCCAATG CCGACACGGA GTGGATGGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
TGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA AGAGCAGGCT GAGAAATTTG
CAAAGGATAA AGGCGGTAAG 451 GTTGTCGGTT TCGACGATAT GCCTGATACC
TATATTTTCA AATAA
This corresponds to the amino acid sequence <SEQ ID 1988: ORF
620>:
TABLE-US-02374 m620.pep 1 MKKTLLAIVA VSALSACRQA EEGPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTIK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWMD AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDT YIFK* m620/g620 97.0% identity
in 164 aa overlap 10 20 30 40 50 60 m620.pep
MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP
||||||||||| ||||||||||:||||||||||||||||||||||||||||||||||||| g620
MKKTLLAIVAVFALSACRQAEEAPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP 10 20
30 40 50 60 70 80 90 100 110 120 m620.pep
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS
||||||||:|||||||||||||||||||||||||||||||||||||||:||||||||||| g620
DQPVWFSTVKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWIDAKKAFYVIDS 70 80
90 100 110 120 130 140 150 160 m620.pep
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX
|||||||||||||||||||||||||||||||||||||||:||||| g620
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDAYIFKX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1989>:
TABLE-US-02375 a620.seq 1 ATGAAAAAAA CCCTGTTGGC AATTGTTGCC
GTTTCCGCCT TAAGTGCCTG 51 CCGGCAGGCG GAAGAGGGAC CGCCGCCTTT
ACCCCGGCAG ATTAGCGACC 101 GTTCGGTCGG ACACTATTGC AGTATGAACC
TGACCGAACA CAACGGCCCC 151 AAAGCCCAGA TTTTCTTGAA CGGCAAACCC
GATCAGCCCG TTTGGTTCTC 201 CACCATCAAG CAGATGTTCG GCTATACCAA
GCTGCCCGAA GAGCCTAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCCAATG CCGACACGGA GTGGATGGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
TGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA AGAGCAGGCT GAGAAATTTG
CAAAGGATAA AGGCGGTAAG 451 GTTGTCGGTT TCGACGATAT GCCTGATACC
TATATTTTCA AATAA
This corresponds to the amino acid sequence <SEQ ID 1990; ORF
620.a>:
TABLE-US-02376 a620.pep 1 MKKTLLAIVA VSALSACRQA EEGPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTIK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWMD AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDT YIFK* m620/a620 100.0%
identity in 164 aa overlap 10 20 30 40 50 60 m620.pep
MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a620
MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP 10 20
30 40 50 60 70 80 90 100 110 120 m620.pep
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a620
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS 70 80
90 100 110 120 130 140 150 160 m620.pep
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX
||||||||||||||||||||||||||||||||||||||||||||| a620
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1991>:
TABLE-US-02377 g622.seq 1 ATGCAactta ccgctgtcgg ACTCAATCAT
CAAACCGCAC CTTTAAGCAT 51 ACGGGAAAag ctggCGTTTG CCGCCGCCGC
CCTGCCAGAA gccgTccgCA 101 ATCTTGCCCG AAGCAATGCG GCAACGGAGG
CGGTAATCCT TTCTACCTGC 151 AACCGCACCG AGCTTTACTG CGTCGGCGAT
TCGGAAgaaa TCATCCGATG 201 GCTTGCCGAT TACCACAGTT TGCCGATTGA
AGAAATCCGT CCGTATCTGT 251 ACACGCTGGA TATGCAGGAA ACCGTGCGCC
ACGCCTTCCG CGTTGCCTGC 301 GGCTTGGATT CGATGGTTTT GGGCGAGCCG
CAGATTTTGG GGCAGATTAA 351 AGATGCGGTG CGTGCGGCTC AAGAACAGGA
AAGTATGGGG GCAAAACTCA 401 ATGCCCTGTT CCAAAAAACC TTTTCCGTTG
CTAAAGAAGT CCGTACCGAT 451 ACCGCTGTCG GCGAAAATTC GGTTTCGATG
GCTTCCGCGT CCGTCAAGTT 501 GGCGGAACAG ATTTTTCCCG ACATCGGCGA
TTTGAACGTA TTGTTTATCG 551 GCGCAGGCGA AATGATTGAG CTGGTTGCCA
CTTATTTTGC CGCCAAAAAT 601 CCCCGGCTGA TGACGGTTGC CAACCGGACG
CTGGCGCGTG CACAGGAGTT 651 GTGCGACAAG CTCGGTGTTA ACGCCGAACC
GTGCCTGCTG TCCGATCTGC 701 CTGCCATTCT GCACGATTAC GACGTGGTGG
TTTCTTCAAC GGCGAGCCAG 751 CTTCCGATAG TCGGCAAAGG CATGGTCGAA
CGCGCATTGA AACAGCGTCA 801 GAGTATGCCG TTGTTCATGC TTGACTTGGC
CGTGCCGCGC GATATTGAAG 851 CGGAAGTCGG CGATTTGAAC GATGCGTATC
TTTATACGGT GGACGATATG 901 GTCAACATCG TCCAAAGCGg caaggaggca
aggcagaaag ccgccgcCgc 951 cgccgaaacg ctggTGTCCG AAAAGGTTGC
CGAATTTGTC AGGCAGCAGC 1001 AGGGCAGGCA GagcgttcCG CTGATTAAGG
CCTTGCGGGA CGAGGGCGAG 1051 AAAGCGCGCA AGCAGGTGTT GGAAAATGCG
ATGAAACAGC TTGCCAAAGG 1101 CGcaaCGGCG GAAGaggttt TGgaacggct
gtccgtcCAA CTGACCAACA 1151 AGCTGCTGCA TTCGCCAACT CAAACCTTGA
ATAAGGCGGG GGAAGAAGAT 1201 AAAGatttGG TTCATGCCgt cGCGCAGATt
tatcatttGG ACAAATAA
This corresponds to the amino acid sequence <SEQ ID 1992; ORF
622.ng>:
TABLE-US-02378 g622.pep 1 MQLTAVGLNH QTAPLSIREK LAFAAAALPE
AVRNLARSNA ATEAVILSTC 51 NRTELYCVGD SEEIIRWLAD YHSLPIEEIR
PYLYTLDMQE TVRHAFRVAC 101 GLDSMVLGEP QILGQIKDAV RAAQEQESMG
AKLNALFQKT FSVAKEVRTD 151 TAVGENSVSM ASASVKLAEQ IFPDIGDLNV
LFIGAGEMIE LVATYFAAKN 201 PRLMTVANRT LARAQELCDK LGVNAEPCLL
SDLPAILHDY DVVVSSTASQ 251 LPIVGKGMVE RALKQRQSMP LFMLDLAVPR
DIEAEVGDLN DAYLYTVDDM 301 VNIVQSGKEA RQKAAAAAET LVSEKVAEFV
RQQQGRQSVP LIKALRDEGE 351 KARKQVLENA MKQLAKGATA EEVLERLSVQ
LTNKLLHSPT QTLNKAGEED 401 KDLVHAVAQI YHLDK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1993>:
TABLE-US-02379 m622.seq 1 ATGCAACTTA CCGCTGTCGG ACTCAATCAT
CAAACCGCAC CTTTAAGCAT 51 ACGGGAAAAG CTGGCGTTTG CCGCCGCCGC
CCTGCCTAAA GCCGTCCGCA 101 ATCTTGCCCG AAGCAATGCG GCAACGGAGG
CGGTAATCCT TTCTACCTGC 151 AACCGCACCG AGCTTTACTG CGTCGGTGAT
TCGGAAGAAA TCATCCGATG 201 GCTTGCCGAT TACCACAGTT TGCCGATTGA
AGAAATCCGT CCGTATCTGT 251 ACGCGCTGGA TATGCAGGAG ACTGTGCGCC
ATGCTTTCCG CGTCGCCTGC 301 GGGCTGGATT CGATGGTGTT GGGCGAGCCG
CAGATTTTAG GACAGATTAA 351 GGATGCCGTT AGGGTTGCTC AAGAGCAGGA
AAGTATGGGT AAGAAACTCA 401 ATGCCCTGTT CCAAAAAACC TTTTCCGTTG
CTAAAGAGGT CCGTACCGAT 451 ACTGCCGTCG GCGAAAACTC GGTTTCCATG
GCTTCCGCTT CCGTCAAATT 501 GGCGGAACAG ATTTTTCCCG ACATCGGCGA
TTTGAATGTC TTGTTTATCG 551 GCGCAGGCGA AATGATTGAG CTGGTTGCCA
CTTATTTTGC CGCCAAAAGT 601 CCCCGGCTGA TGACGGTTGC CAACCGGACG
CTGGCGCGTG CACAGGAGTT 651 GTGCGACAAG CTCGGTGTCA ACGCCGAACC
GTGCCTGCTG TCCGATCTGC 701 CTGCCATTCT GCACGATTAC GACGTAGTGG
TTTCTTCAAC GGCAAGCCAG 751 TTGCCCATTG TCGGCAAAGG CATGGTGGAG
CGTGCATTGA AACAAAGGCA 801 GAGTATGCCG TTGTTCATGC TTGATTTGGC
AGTGCCGCGT GACATTGAAG 851 CGGAAGTCGG CGATTTGAAT GATGCCTATC
TTTATACGGT GGACGATATG 901 GTCAATATCG TCCAAAGCGG CAAGGAGGCA
AGGCAGAAGG CCGCCGCCGC 951 CGCCGAAACG CTGGTGTCCG AGAAAGTTGC
CGAATTTGTC AGGCAGCAGC 1001 AGGGCAGGCA GAGTGTCCCC TTGATTAAGG
CGTTGCGGGA CGAGGGCGAG 1051 AAAGCGCGCA AACAGGTGTT GGAAAATGCC
ATGAAACAGC TTGCCAAAGG 1101 CGCAACGGCA GAAGAGGTTT TGGAACGGCT
GTCCGTCCAA CTGACCAACA 1151 AGCTGCTGCA TTCGCCGACC CAAACCTTGA
ATAAGGCGGG GGAAGAAGAT 1201 AAAGATTTGG TTCATGCCGT CGCGCAGATT
TATCATTTGG ACAAATAA
This corresponds to the amino acid sequence <SEQ ID 1994; ORF
622>:
TABLE-US-02380 m622.pep 1 MQLTAVGLNH QTAPLSIREK LAFAAAALPK
AVRNLARSNA ATEAVILSTC 51 NRTELYCVGD SEEIIRWLAD YHSLPIEEIR
PYLYALDMQE TVRHAFRVAC 101 GLDSMVLGEP QILGQIKDAV RVAQEQESMG
KKLNALFQKT FSVAKEVRTD 151 TAVGENSVSM ASASVKLAEQ IFPDIGDLNV
LFIGAGEMIE LVATYFAAKS 201 PRLMTVANRT LARAQELCDK LGVNAEPCLL
SDLPAILHDY DVVVSSTASQ 251 LPIVGKGMVE RALKQRQSMP LFMLDLAVPR
DIEAEVGDLN DAYLYTVDDM 301 VNIVQSGKEA RQKAAAAAET LVSEKVAEFV
RQQQGRQSVP LIKALRDEGE 351 KARKQVLENA MKQLAKGATA EEVLERLSVQ
LTNKLLHSPT QTLNKAGEED 401 KDLVHAVAQI YHLDK* m622/g622 98.8%
identity in 415 aa overlap 10 20 30 40 50 60 m622.pep
MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEAVILSTCNRTELYCVGD
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g622
MQLTAVGLNHQTAPLSIREKLAFAAAALPEAVRNLARSNAATEAVILSTCNRTELYCVGD 10 20
30 40 50 60 70 80 90 100 110 120 m622.pep
SEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGLDSMVLGEPQILGQIKDAV
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| g622
SEEIIRWLADYHSLPIEEIRPYLYTLDMQETVRHAFRVACGLDSMVLGEPQILGQIKDAV 70 80
90 100 110 120 130 140 150 160 170 180 m622.pep
RVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSMASASVKLAEQIFPDIGDLNV
|:|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| g622
RAAQEQESMGAKLNALFQKTFSVAKEVRTDTAVGENSVSMASASVKLAEQIFPDIGDLNV 130
140 150 160 170 180 190 200 210 220 230 240 m622.pep
LFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELCDKLGVNAEPCLLSDLPAILHDY
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| g622
LFIGAGEMIELVATYFAAKNPRLMTVANRTLARAQELCDKLGVNAEPCLLSDLPAILHDY 190
200 210 220 230 240 250 260 270 280 290 300 m622.pep
DVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDLAVPRDIEAEVGDLNDAYLYTVDDM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g622
DVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDLAVPRDIEAEVGDLNDAYLYTVDDM 250
260 270 280 290 300 310 320 330 340 350 360 m622.pep
VNIVQSGKEARQKAAAAAELLVSEKVAEFVRQQQGRQSVPLIKALRDEGEKARKQVLENA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g622
VNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQGRQSVPLIKALRDEGEKARKQVLENA 310
320 330 340 350 360 370 380 390 400 410 m622.pep
MKQLAKGATAEEVLERLSVQLTNKLLHSPTQTLNKAGEEDKDLVHAVAQIYHLDKX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g622
MKQLAKGATAEEVLERLSVQLTNKLLHSPTQTLNKAGEEDKDLVHAVAQIYHLDKX 370 380
390 400 410
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1995>:
TABLE-US-02381 a622.seq 1 ATGCAACTTA CCGCTGTCGG ACTCAATCAT
CAAACCGCAC CTTTAAGCAT 51 ACGGGAAAAG CTGGCGTTTG CCGCGGCCTG
CCTGCCCGAA GCCGTCCGCA 101 ATCTTGCCCG AAGCAATGCG GCAACGGAGG
CGGTAATCCT TTCTACCTGC 151 AACCGTACCG AGCTTTACTG TGTAGGTGAT
TCGGAAGAAA TCATCCGTTG 201 GCTCGCAGAC TATCACAGCC TTCCCATAGA
AGAAATCAGC CCCTACCTTT 251 ATACTTTGGG GATGCAGGAG ACTGTGCGCC
ATGCTTTCCG CGTCGCCTGC 301 GGCTTGGATT CGATGGTGTT GGGCGAGCCG
CAGATTTTAG GACAGATTAA 351 GGATGCGGTC AGGGTTGCTC AAGAGCAGGA
AAGTATGGGT AAGAAACTCA 401 ATGCCCTGTT CCAAAAAACC TTTTCTGTTG
CTAAAGAGGT CCGTACCGAT 451 ACTGCCGTCG GCGAAAACTC GGTTTCCATG
GCTTCCGCTT CCGTCAAGTT 501 GGCAGAGCAG ATTTTCCCCG ACATCGGCGA
TTTGAATGTC TTGTTTATCG 551 GTGCGGGTGA GATGATTGAG CTGGTTGCCA
CTTATTTTGC CGCCAAAAGT 601 CCCCGGCTGA TGACGGTTGC CAACCGGACG
CTGGCGCGTG CACAGGAGTT 651 GTGCGACAAG CTCGGTGTCA ACGCCGAACC
GTGCCTGCTG TCCGATCTGC 701 CTGCCATTTT GCATGAGTAC GACGTGGTGG
TTTCTTCAAC GGCAAGCCAG 751 TTGCCCATTG TCGGCAAAGG TATGGTGGAG
CGCGCATTGA AACAAAGGCA 801 GAGTATGCCG TTGTTTATGC TTGACTTGGC
CGTGCCGCGA GACATTGAGG 851 CGGAAGTCGG AGATTTGAAC GATGCCTATC
TTTATACGGT GGACGATATG 901 GTCAATATCG TCCAAAGCGG CAAGGAGGCA
AGGCAGAAGG CCGCCGCCGC 951 CGCCGAAACG CTGGTGTCCG AGAAGGTTGC
CGAATTTGTC AGGCAGCAGC 1001 AGGGCAGGCA GAGTGTCCCG TTAATCAGGG
CATTGAGGGA TGAGGGAGAG 1051 AAAGCGCGCA AACAGGTCTT GGAAAATGCG
ATGAAACAGC TTGCCAAAGG 1101 CGCAACGGCA GAAGAGGTTT TGGAAAGGCT
GTCGATCCAA CTGACCAACA 1151 AGCTGCTGCA TTCGCCGACC CAAACCTTGA
ATAAGGCGGG GGAAGAAGAT 1201 AAAGATTTGG TTCACGCCGT CGCGCAGATT
TATCATTTGG ACAAATAA
This corresponds to the amino acid sequence <SEQ ID 1996; ORF
622.a>:
TABLE-US-02382 a622.pep 1 MQLTAVGLNH QTAPLSIREK LAFAAACLPE
AVRNLARSNA ATEAVILSTC 51 NRTELYCVGD SEEIIRWLAD YHSLPIEEIS
PYLYTLGMQE TVRHAFRVAC 101 GLDSMVLGEP QILGQIKDAV RVAQEQESMG
KKLNALFQKT FSVAKEVRTD 151 TAVGENSVSM ASASVKLAEQ IFPDIGDLNV
LFIGAGEMIE LVATYFAAKS 201 PRLMTVANRT LARAQELCDK LGVNAEPCLL
SDLPAILHEY DVVVSSTASQ 251 LPIVGKGMVE RALKQRQSMP LFMLDLAVPR
DIEAEVGDLN DAYLYTVDDM 301 VNIVQSGKEA RQKAAAAAET LVSEKVAEFV
RQQQGRQSVP LIRALRDEGE 351 KARKQVLENA MKQLAKGATA EEVLERLSIQ
LTNKLLHSPT QTLNKAGEED 401 KDLVHAVAQI YHLDK* m622/a622 98.1%
identity in 415 aa overlap 10 20 30 40 50 60 m622.pep
MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEAVILSTCNRTELYCVGD
|||||||||||||||||||||||||| ||:|||||||||||||||||||||||||||||| a622
MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSNAATEAVILSTCNRTELYCVGD 10 20
30 40 50 60 70 80 90 100 110 120 m622.pep
SEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGLDSMVLGEPQILGQIKDAV
||||||||||||||||||| ||||:| ||||||||||||||||||||||||||||||||| a622
SEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGLDSMVLGEPQILGQIKDAV 70 80
90 100 110 120 130 140 150 160 170 180 m622.pep
RVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSMASASVKLAEQIFPDIGDLNV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a622
RVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSMASASVKLAEQIFPDIGDLNV 130
140 150 160 170 180 190 200 210 220 230 240 m622.pep
LFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELCDKLGVNAEPCLLSDLPAILHDY
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a622
LFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELCDKLGVNAEPCLLSDLPAILHEY 190
200 210 220 230 240 250 260 270 280 290 300 m622.pep
DVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDLAVPRDIEAEVGDLNDAYLYTVDDM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a622
DVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDLAVPRDIEAEVGDLNDAYLYTVDDM 250
260 270 280 290 300 310 320 330 340 350 360 m622.pep
VNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQGRQSVPLIKALRDEGEKARKQVLENA
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| a622
VNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQGRQSVPLIRALRDEGEKARKQVLENA 310
320 330 340 350 360 370 380 390 400 410 m622.pep
MKQLAKGATAEEVLERLSVQLTNKLLHSPTQTLNKAGEEDKDLVHAVAQIYHLDKX
||||||||||||||||||:||||||||||||||||||||||||||||||||||||| a622
MKQLAKGATAEEVLERLSIQLTNKLLHSPTQTLNKAGEEDKDLVHAVAQIYHLDKX 370 380
390 400 410
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 1997>:
TABLE-US-02383 g624.seq 1 ATGATCCGTT ATCTTTTAAT TGCCTGCGGC
GGCATCTCCC TGCTGTTGGG 51 GATAATCGGC ATTTTTTTGC CGCTGTTGCC
GACCACGCCG TTCGTACTAC 101 TCTCCGCCGC CTGCTGGGCA AAGGCAtccc
cgcgcTTTCa ccgCTGGCTG 151 CACcgGCacc gCTATTTCGG CCCGATGGTT
CATAACTGGG AACAAAACGG 201 CGCAGTGCCG CGCAAAGCCA AGATTTTCGC
CATCAGCATG AtaaccgcAt 251 cctgcctcat gatctTTtgg CattTTCccc
aacnctggtg ggtcGGGGCG 301 GTTTCATCGG TTTTTTGTTC CCTTGTcacC
ATacggatgt gGcacAGacC 351 cgaatCTTGA
This corresponds to the amino acid sequence <SEQ ID 1998; ORF
624.ng>:
TABLE-US-02384 g624.pep 1 MIRYLLIACG GISLLLGIIG IFLPLLPTTP
FVLLSAACWA KASPRFHRWL 51 HRHRYFGPMV HNWEQNGAVP RKAKIFAISM
ITASCLMIFW HFPQXWWVGA 101 VSSVFCSLVT IRMWHRPES*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 1999>:
TABLE-US-02385 m624.seq 1 ATGATACGTT ATCTTTTAAT TGCCTGCGGC
TGCATTTCCC TACTGTTGGG 51 TATCATCGGC ATTTTTTTGC CGCTGTTGCC
GACCACGCCG TTCGTACTGC 101 TCTCCGCCGC CTGCTGGGCA AAGGCATCCC
CGCGCTTTTA CCGCTGGCTG 151 CACCGGCACC GCTATTTCGG CCCGATGGTT
CATAACTGGG AACAAAACGG 201 CGCAGTGCCG CGCAAAGCCA AAATATTCGC
CATCAGTATG ATGACCGCAT 251 CCTGCCTGAT AATGTTTTGG CAGTTTCCCC
AACGCTGGTG GGTCGGGGCG 301 GTTTCATCGG TTTTTTGTTC CCTTGTCGCC
ATATGGATGT GGCGCAGGCC 351 CGAATCTTGA
This corresponds to the amino acid sequence <SEQ ID 2000; ORF
624>:
TABLE-US-02386 m624.pep 1 MIRYLLIACG CISLLLGIIG IFLPLLPTTP
FVLLSAACWA KASPRFYRWL 51 HRHRYFGPMV HNWEQNGAVP RKAKIFAISM
MTASCLIMFW QFPQRWWVGA 101 VSSVFCSLVA IWMWRRPES* m624/g624 91.6%
identity in 119 aa overlap 10 20 30 40 50 60 m624.pep
MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASPRFYRWLHRHRYFGPMV
|||||||| |||||||||||||||||||||||||||||||||||:||||||||||||| g624
MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASPRFHRWLHRHRYFGPMV 10 20
30 40 50 60 70 80 90 100 110 120 m624.pep
HNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVSSVFCSLVAIWMWRRPESX
||||||||||||||||||||:|||||::||:||| ||||||||||||||:| ||:||||| g624
HNWEQNGAVPRKAKIFAISMITASCLMIFWHFPQXWWVGAVSSVFCSLVTIRMWHRPESX 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2001>:
TABLE-US-02387 a624.seq 1 ATGATACGTT ATCTTTTAAT TGCCTGCGGC
TGCATTTCCC TGCTGTTGGG 51 TATCATCGGC ATTTTTTTGC CGCTGTTGCC
GACCACGCCG TTCGTACTGC 101 TCTCCGCCGC CTGCTGGGCA AAGGCATCCC
CGCGCTTTCA CCGCTGGCTG 151 CACCGGCACC GCTATTTCGG TCCGATGGTT
CATAACTGGG AACAAAACGG 201 CGCAGTGCCG CGCAAAGCCA AAATATTCGC
CATCAGTATG ATGACCGCAT 251 CCTGCCTGAT AATGTTTTGG CAGTTTCCCC
AACGCTGGTG GGTCGGGGCG 301 GTTTCATCGG TTTTTTGTTC CCTTGTCGCC
ATATGGATGT GGCGCAGGCC 351 CGAATCTTGA
This corresponds to the amino acid sequence <SEQ ID 2002; ORF
624.a>:
TABLE-US-02388 a624.pep 1 MIRYLLIACG CISLLLGIIG IFLPLLPTTP
FVLLSAACWA KASPRFHRWL 51 HRHRYFGPMV HNWEQNGAVP RKAKIFAISM
MTASCLIMFW QFPQRWWVGA 101 VSSVFCSLVA IWMWRRPES* m624/a624 99.2%
identity in 119 aa overlap 10 20 30 40 50 60 m624.pep
MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASPRFYRWLHRHRYFGPMV
||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| a624
MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASPRFHRWLHRHRYFGPMV 10 20
30 40 50 60 70 80 90 100 110 120 m624.pep
HNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVSSVFCSLVAIWMWRRPESX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a624
HNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVSSVFCSLVAIWMWRRPESX 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2003>:
TABLE-US-02389 a625.seq 1 ATGTTTGCAA CCAGGAAAAT GAAGAAGATG
ACGATGTGCA CGCGGCGGGT 51 ACGGTTTTGG TTGGCTTTCA GCAGCGGACG
AATCATCAGC ATTGCTGCGC 101 CGGTCGTTCC CATGATAGAG GCAAGTGCCG
TACCGACGGC AAGCAGGGCG 151 GTGTTGAGCT TGGGTGTGCC GTTCAAGTCG
CCCCAAACCA AAATGCCGCC 201 TGAAATGGTG TACAGGGCAA GCAGCAGCAG
GATGAAAGGG ATGTATTCTT 251 CAACGAGTGC GTGTGCGACG GTATGGATAC
CGGCGGACGC GCCAAAAACC 301 AAACTGAACG GGATGAGGAA GAGCAATGTC
CAAAAGGCGG TAATTTTGCC 351 GTAA
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2004>:
TABLE-US-02390 g625.seq 1 atGTTTGCAA CCAGGAAAAT GAAGAAGATG
ACGATGTGCA CGCGGCGGGT 51 ACGGtcTTGG TTGGCTTTCA GCAGCGGACG
AATCATCAGC AttgCCGCGC 101 CGGtcgttcC CATGATAGAG GCAAGTGCCG
TACCGACGGC AAGCAGGGCG 151 GTGTTGAGCT TGGGTGTGCC GTTCAAGTCG
CCCCAAACCA AAATGCCGCC 201 TGAAATGGTG TACAGGGCAA GCAGCAGCAG
GATGAAGGGG ATATATTCTT 251 CAACGAGTGC GTGTGCGACG GTATGGATAC
CGGCGGACGC GCCAAAAACC 301 AAACTGAACG GGATGAGGAA GAGCAATGTC
CAAAAGGCGG TGATTTTGCc 351 gtAA
This corresponds to the amino acid sequence <SEQ ID 2005; ORF
625.ng>:
TABLE-US-02391 g625.pep 1 MFATRKMKKM TMCTRRVRSW LAFSSGRIIS
IAAPVVPMIE ASAVPTASRA 51 VLSLGVPFKS PQTKMPPEMV YRASSSRMKG
IYSSTSACAT VWIPADAPKT 101 KLNGMRKSNV QKAVILP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2006>:
TABLE-US-02392 m625.seq 1 ATGTTTGCAA CCAGGAAAAT GAAGAAGATG
ACGATGTGCA CGCGGCGGGT 51 ACGGTTTTGG TTGGCTTTCA GCAGCGGACG
AATCATCAGC ATTGCTGCGC 101 CGGTCGTTCC CATGATAGAG GCAAGTGCCG
TACCGACGGC AAGCAGGGCG 151 GTGTTGAGCT TGGGTGTGCC GTTCAAGTCG
CCCCAAACCA AAATGCCGCC 201 TGAAATGGTG TACAGGGCAA GCAGCAGCAG
GATGAAAGGG ATGTATTCTT 251 CAACGAGTGC GTGTGCGACG GTATGGATAC
CGGCGGACGC GCCAAAAACC 301 AAACTGAACG GGATGAGGAA GAGCAATGTC
CAAAAGGCGG TAATTTTGCC 351 GTAA
This corresponds to the amino acid sequence <SEQ ID 2007; ORF
625>:
TABLE-US-02393 m625.pep 1 MFATRKMKKM TMCTRRVRFW LAFSSGRIIS
IAAPVVPMIE ASAVPTASRA 51 VLSLGVPFKS PQTKMPPEMV YRASSSRMKG
MYSSTSACAT VWIPADAPKT 101 KLNGMRKSNV QKAVILP* m625/g625 98.3%
identity in 117 aa overlap 10 20 30 40 50 60 m625.pep
MFATRKMKKMTMCTRRVRFWLAFSSGRIISIAAPVVPMIEASAVPTASRAVLSLGVPFKS
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g625
MFATRKMKKMTMCTRRVRSWLAFSSGRIISIAAPVVPMIEASAVPTASRAVLSLGVPFKS 10 20
30 40 50 60 70 80 90 100 110 m625.pep
PQTKMPPEMVYRASSSRMKGMYSSTSACATVWIPADAPKTKLNGMRKSNVQKAVILPX
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| g625
PQTKMPPEMVYRASSSRMKGIYSSTSACATVWIPADAPKTKLNGMRKSNVQKAVILPX 70 80 90
100 110
This corresponds to the amino acid sequence <SEQ ID 2008; ORF
625.a>:
TABLE-US-02394 a625.pep 1 MFATRKMKKM TMCTRRVRFW LAFSSGRIIS
IAAPVVPMIE ASAVPTASRA 51 VLSLGVPFKS PQTKMPPEMV YRASSSRMKG
MYSSTSACAT VWIPADAPKT 101 KLNGMRKSNV QKAVILP* m625/a625 100.0%
identity in 117 aa overlap 10 20 30 40 50 60 m625.pep
MFATRKMKKMTMCTRRVRFWLAFSSGRIISIAAPVVPMIEASAVPTASRAVLSLGVPFKS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a625
MFATRKMKKMTMCTRRVRFWLAFSSGRIISIAAPVVPMIEASAVPTASRAVLSLGVPFKS 10 20
30 40 50 60 70 80 90 100 110 m625.pep
PQTKMPPEMVYRASSSRMKGMYSSTSACATVWIPADAPKTKLNGMRKSNVQKAVILPX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a625
PQTKMPPEMVYRASSSRMKGMYSSTSACATVWIPADAPKTKLNGMRKSNVQKAVILPX 70 80 90
100 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2009>:
TABLE-US-02395 g627.seq 1 ATGTCCGGCC TTTGGAAACC CGAACACCCG
GGATTTGAAA TCCTCGGCAG 51 CCGTTACGCC CTGCAAAACC TTGTCCGCGA
TGTCATCCTG ATTACATTGA 101 CCGCCGTATC TATGGCAATC ACGCCCAAAC
AAGTCCGCGC AGGCAACGAA 151 TTCAACTTTG AACCCATCGC CGAAGTGGGC
AAACTCTTCC TCGGCATCTT 201 CATCACCATC TTCCCCGTCC TGAGCATTCT
GAAAGCAGGC GAGGCAGGCG 251 CGCTGGGCGG GGTGGTATCG CTGGTTCACG
ATACGGCAGG TCATCCGATT 301 AATACGATGT ATTTCTGGAT GAGCGGCATA
TTGTCGGCAT TCTTGGATAA 351 CGCGCCCACT TATCTCGTGT TTTTCAATAT
GGCGGGCGGC GATGCCCAAG 401 CCTTAATGAC GGGTCCCCTG TTTCATTcgc
TGCTGGCGGT TTCTAtgggT 451 tCGGTATTCA TGGGCGCACT GaccTACATc
gGCAAcgcac cgaactTCAT 501 GGTcaaggcc aTTGCCGaaC agcgcgGCgt
accgaTGCcg actTTCTTcc 551 ggtaTAtgat gtggtcggtc gcCTTCCTGa
caCCCGTCTT CAtcgTACAT 601 ACCCTcgtCT TTTTcgTTtt cAAACTACTg taa
This corresponds to the amino acid sequence <SEQ ID 2010: ORF
627.ng>:
TABLE-US-02396 g627.pep 1 MSGLWKPEHP GFEILGSRYA LQNLVRDVIL
ITLTAVSMAI TPKQVRAGNE 51 FNFEPIAEVG KLFLGIFITI FPVLSILKAG
EAGALGGVVS LVHDTAGHPI 101 NTMYFWMSGI LSAFLDNAPT YLVFFNMAGG
DAQALMTGPL FHSLLAVSMG 151 SVFMGALTYI GNAPNFMVKA IAEQRGVPMP
TFFRYMMWSV AFLTPVFIVH 201 TLVFFVFKLL *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2011>:
TABLE-US-02397 m627.seq 1 ATGTCCGGCC TTTGGAAACC CGAACACCCG
GGATTTGAAA TCCTCGGCAG 51 CCGTTACGCC CTGCAAAACC TCGTCCGCGA
TGTCATCCTG ATTGCATTGA 101 CCGCCGTATC TATGGCAATC ACGCCCAAAC
AAGTCCGCGC AGGCAACGAA 151 TTCAACTTTG AACCCATCGC CGAAGTGGGC
AAACTCTTCC TCGGCATCTT 201 CATCACCATC TTTCCCGTCC TGAGCATTCT
GAAAGCAGGC GAGGCAGGCG 251 CGCTGGGCGG GGTGGTATCG CTGGTTCACG
ATACGGCAGG TCATCCGATT 301 AATGTGATGT ATTTTTGGAT GAGCGGCATA
TTGTCGGCAT TCTTGGATAA 351 CGCGCCCACT TATCTCGTTT TTTTCAATAT
GGCGGGCGGC GATGCCCAAG 401 CCTTGATGAC GGGTACCCTG TTTCATTCGC
TGCTGGCGGT TTCTATGGGT 451 TCGGTATTCA TGGGCGCACT GACCTACATC
GGCAACGCAC CGAACTTCAT 501 GGTCAAGGCC ATTGCCGAAC AGCGCGGCGT
ACCGATGCCG ACTTTCTTCG 551 GCTATATGAT GTGGTCGGTC GCCTTCCTGA
CACCCGTCTT CATCGTACAT 601 ACCCTTATCT TTTTCGTTTT CAAACTGCTG TAA
This corresponds to the amino acid sequence <SEQ ID 2012; ORF
627>:
TABLE-US-02398 m627.pep 1 MSGLWKPEHP GFEILGSRYA LQNLVRDVIL
IALTAVSMAI TPKQVRAGNE 51 FNFEPIAEVG KLFLGIFITI FPVLSILKAG
EAGALGGVVS LVHDTAGHPI 101 NVMYFWMSGI LSAFLDNAPT YLVFFNMAGG
DAQALMTGTL FHSLLAVSMG 151 SVFMGALTYI GNAPNFMVKA IAEQRGVPMP
TFFGYMMWSV AFLTPVFIVH 201 TLIFFVFKLL *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02399 m627/g627 97.6% identity in 210 aa overlap 10 20 30
40 50 60 m627.pep
MSGLWKPEHPGFEILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVG
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| g627
MSGLWKPEHPGFEILGSRYALQNLVRDVILITLTAVSMAITPKQVRAGNEFNFEPIAEVG 10 20
30 40 50 60 70 80 90 100 110 120 m627.pep
KLFLGIFITIFPVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPT
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| g627
KLFLGIFITIFPVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPT 70 80
90 100 110 120 130 140 150 160 170 180 m627.pep
YLVFFNMAGGDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMP
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g627
YLVFFNMAGGDAQALMTGPLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMP 130
140 150 160 170 180 190 200 210 m627.pep
TFFGYMMWSVAFLTPVFIVHTLIFFVFKLLX ||| ||||||||||||||||||:||||||||
g627 IFFRYMMWSVAFLTPVFIVHILVFFVFKLLX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2013>:
TABLE-US-02400 a627.seq 1 ATGTCCGGCC TTTGGAAACC CGAACACCCG
GGATTTGAAA TCCTCGGCAG 51 CCGTTACGCC CTGCAAAACC TCGTCCGCGA
TGTCATCCTG ATTGCATTGA 101 CCGCCGTATC TATGGCAATC ACGCCCAAAC
AAGTCCGCGC AGGCAACGAA 151 TTCAACTTTG AACCCATCGC CGAAGTGGGC
AAACTCTTCC TCGGCATCTT 201 CATCACCATC TTTCCCGTCC TGAGCATTCT
GAAAGCAGGC GAGGCAGGCG 251 CGCTGGGCGG GGTGGTATCG CTGGTTCACG
ATACGGCAGG TCATCCGATT 301 AATGTGATGT ATTTTTGGAT GAGCGGCATA
TTGTCGGCAT TCTTGGATAA 351 CGCGCCCACT TATCTCGTTT TTTTCAATAT
GGCGGGCGGC GATGCCCAAG 401 CCTTGATGAC GGGTTCCCTG TTTCATTCGC
TGCTGGCGGT TTCTATGGGT 451 TCGGTATTCA TGGGCGCACT GACCTACATC
GGCAACGCAC CGAACTTCAT 501 GGTCAAGGCC ATTGCCGAAC AGCGCGGCGT
ACCGATGCCG ACTTTCTTCG 551 GCTATATGAT GTGGTCGGTC GCCTTCCTGA
CACCCGTCTT CATCGTACAT 601 ACCCTTATCT TTTTCGTTTT CAAACTGCTG TAA
This corresponds to the amino acid sequence <SEQ ID 2014; ORF
627.a>:
TABLE-US-02401 a627.pep 1 MSGLWKPEHP GFEILGSRYA LQNLVRDVIL
IALTAVSMAI TPKQVRAGNE 51 FNFEPIAEVG KLFLGIFITI FPVLSILKAG
EAGALGGVVS LVHDTAGHPI 101 NVMYFWMSGI LSAFLDNAPT YLVFFNMAGG
DAQALMTGSL FHSLLAVSMG 151 SVFMGALTYI GNAPNFMVKA IAEQRGVPMP
TFFGYMMWSV AFLTPVFIVH 201 TLIFFVFKLL * m627/a627 99.5% identity in
210 aa overlap 10 20 30 40 50 60 m627.pep
MSGLWKPEHPGFEILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a627
MSGLWKPEHPGFEILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVG 10 20
30 40 50 60 70 80 90 100 110 120 m627.pep
KLFLGIFITIFPVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a627
KLFLGIFITIFPVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPT 70 80
90 100 110 120 130 140 150 160 170 180 m627.pep
YLVFFNMAGGDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMP
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| a627
YLVFFNMAGGDAQALMTGSLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMP 130
140 150 160 170 180 190 200 210 m627.pep
TFFGYMMWSVAFLTPVFIVHTLIFFVFKLLX |||||||||||||||||||||||||||||||
a627 TFFGYMMWSVAFLTPVFIVHTLIFFVFKLLX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2015>:
TABLE-US-02402 g628.seq 1 ATGTGCGTGC CACTCAAGCC GGCAGGATGC
GGGCCGCCAA ATTCATGTGT 51 TTCGATATTG GCAGCATTTT CAGACGGCAC
GTCTGCGCCT GCTGCTTTAC 101 ACACATGGAT TTTACGTTCG GTCAGGCGGC
TCAATACCAA CAGGCCGCGT 151 TTGAAGTCTT CGGCGGCTTC TTTGATGATG
ACCGTAGGGT CGGCAGCCAG 201 CGGATTGGTG TCCATCGCAT TGACGAAGAT
GGCGAACGGC TCGGCATCTA 251 CGGCAGGGAT TTTGCTGAAC GGACGGGTGC
GAAGCGCAGT CCATAAGCCT 301 GATTGAATCA GGTTGCGGCG CACTTTTTCG
CTGCTCAATT TTGCCAGCGC 351 TTCAGGTacg TAG
This corresponds to the amino acid sequence <SEQ ID 2016; ORF
628.ng>:
TABLE-US-02403 g628.pep 1 MCVPLKPAGC GPPNSCVSIL AAFSDGTSAP
AALHTWILRS VRRLNTNRPR 51 LKSSAASLMM TVGSAASGLV SIALTKMANG
SASTAGILLN GRVRSAVHKP 101 D*IRLRRTFS LLNFASASGT *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2017>:
TABLE-US-02404 m628.seq 1 ATGTGCGTGC CACTCAAACC GGCAGGATGC
GGGCCGCCGA ATTCATGTGT 51 TTCGATGTTG GCAGCATTTT CAGACGGCAC
GTCTGCGCCA GCTGCCTTAC 101 AAACATGGAT TTTGCGTTCG GTCAAACGGC
TCAATACCAA CAGGCCGCGT 151 TTGAAATCCT CGGCGGCTTC TTTGATAATG
ACCGTAGGGT CGGCAGCCAG 201 CGGATTGGTG TCCATCGCAT TGACGAAGAT
GGCGAACGGC TCGGCATCGA 251 CGGCAGGAAT TTTGCTGAAC GGACGGGTGC
GCAGCGCAGT CCACAAACCG 301 GATTGGATCA GGTTGCGGCG CACTTCTTCG
CCGCTTAAGT TTGCCAGCGC 351 TTCAGGTGCG TAG
This corresponds to the amino acid sequence <SEQ ID 2018: ORF
628>:
TABLE-US-02405 m628.pep 1 MCVPLKPAGC GPPNSCVSML AAFSDGTSAP
AALQTWILRS VKRLNTNRPR 51 LKSSAASLIM TVGSAASGLV SIALTKMANG
SASTAGILLN GRVRSAVHKP 101 DWIRLRRTSS PLKFASASGA *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02406 m628/g628 93.3% identity in 119 aa overlap 10 20 30
40 50 60 m628.pep
MCVPLKPAGCGPPNSCVSMLAAFSDGTSAPAALQTWILRSVKRLNTNRPRLKSSAASLIM
||||||||||||||||||:||||||||||||||:|||||||:||||||||||||||||:| g628
MCVPLKPAGCGPPNSCVSILAAFSDGTSAPAALHTWILRSVRRLNTNRPRLKSSAASLMM 10 20
30 40 50 60 70 80 90 100 110 120 m628.pep
TVGSAASGLVSIALTKMANGSASTAGILLNGRVRSAVHKPDWIRLRRTSSPLKFASASGA
||||||||||||||||||||||||||||||||||||||||| |||||| | |:||||||: g628
TVGSAASGLVSIALTKMANGSASTAGILLNGRVRSAVHKPDXIRLRRIFSLLNFASASGT 70 80
90 100 110 120 m628.pep X g628 X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2019>:
TABLE-US-02407 a628.seq 1 ATGTGCGTGC CACTCAAACC GGCCGGATGC
GGGCCGCCGA ATTCATGTGT 51 TTCGATGTTG GCAGCATTTT CAGACGGCAC
GTCTGCGCCA GCTGCCTTAC 101 ACACATGGAT TTTACGCTCG GTCAAACGGC
TCAATACCAG CAAACCTCGT 151 CTGAAATCCT CGGCGGCTTC TTTGATCACA
ACCACAGGGT CTGCCGCCAG 201 CGGATTGGTG TCCATCGCAT TGACGAAGAT
GGCGAACGGC TCGGCATCGA 251 CGGCAGGGAT TTTGCTGAAC GGACGGGTAC
GCAGCGCAGT CCACAAACCG 301 GATTGGATCA GATTGCGGCG CACTTCTTCG
CCGCTTAAGT TTGCCAACGC 351 TTCGGGCGCG TAG
This corresponds to the amino acid sequence <SEQ ID 2020; ORF
628.a>:
TABLE-US-02408 a628.pep 1 MCVPLKPAGC GPPNSCVSML AAFSDGTSAP
AALHTWILRS VKRLNTSKPR 51 LKSSAASLIT TTGSAASGLV SIALTKMANG
SASTAGILLN GRVRSAVHKP 101 DWIRLRRTSS PLKFANASGA * m628/a628 95.0%
identity in 120 aa overlap 10 20 30 40 50 60 m628.pep
MCVPLKPAGCGPPNSCVSMLAAFSDGTSAPAALQTWILRSVKRLNTNRPRLKSSAASLIM
|||||||||||||||||||||||||||||||||:||||||||||||::||||||||||| a628
MCVPLKPAGCGPPNSCVSMLAAFSDGTSAPAALHTWILRSVKRLNTSKPRLKSSAASLIT 10 20
30 40 50 60 70 80 90 100 110 120 m628.pep
TVGSAASGLVSIALTKMANGSASTAGILLNGRVRSAVHKPDWIRLRRTSSPLKFASASGA
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a628
TTGSAASGLVSIALTKMANGSASTAGILLNGRVRSAVHKPDWIRLRRTSSPLKFANASGA 70 80
90 100 110 120 m628.pep X | a628 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2021>:
TABLE-US-02409 g629.seq 1 ATGACTGCca aacCTTTTTC CCTCAACCTG
GCcaaCCTCC TGCTGCCggc 51 ggtatTGTTT GCCGTCAGcc tGtcggTCGG
cattgccgaT TTCCGCTGGT 101 CGGATGTGTT TTCGCTGTCC GACAGCCAGC
AAGTGATGTT CATCAGCCGC 151 CTGCCGCGCA CGTTTGcgaT TGTGTTGACG
GGCgcgtcga tagcgGtggc 201 gGGGAtgatt atgcagATTC TGATGCGCAA
CcgtTTTGTC GAGCCTtcta 251 tggcgGGTGC GGGCCAAAGt gcgGCTTTGG
GTttgcttct gAtgtccctg 301 ctgctgcctg CcgcGccgct gccggtcaAA
ATGTCGGtag Ccgccgttgc 351 CGCGCTGATC GGGATGTTGG tctTtatgct
gctaatccgC Cgcctgccac 401 cgacggcgca gctgatgGTg ccgCTGGTGG
Gg.ttATTTT CGGCGGCGTG 451 GttgaGGCGG TGGCGACGTT TGTCGCGTAT
GAGTTTGAGA TGCTGCAAAT 501 GTTGGGCGTG TGGCAGCAGG GCGACTTTTC
AAGCGTGCTG CTGGGGCGGT 551 ACGAGCTGCT TTGGATTACG GGCGGTTTGG
CGGTGTTTGC CTACCTGATT 601 GCCGACCGGC TGACGATTTT GGGGCTGGGC
GAGACGGTGA GCGTGAATTT 651 GGGTTTGAAC CGGACGGCGG TGTTGTGGTC
GGGTTTGATT ATTGTGGCAC 701 TGATTACATC GCTGGTCATT GTAACGGTCG
GCAATATTCC GTTTATCGGG 751 CTGGTCGTGC CGAATATCGT CAGCCGCCTG
ATGGGCGACA GGCTGCGCCA 801 AAGCCTGCCT GCGGTCGCCC TCTTGGGCGC
GTCTTTGGTT TTATTGTGCG 851 ACATTATCGG ACGCATGATT GTGTTTCCGT
TTGAAATTCC GGTCTCCACG 901 GTTTTTGGTG TGTTGGGTAC GGCTTTGTTT
TTGTGGCTTT TGTTGAGGAA 951 ACCCGCCTAT GCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 2022; ORF
629.ng>:
TABLE-US-02410 g629.pep 1 MTAKPFSLNL ANLLLPAVLF AVSLSVGIAD
FRWSDVFSLS DSQQVMFISR 51 LPRTFAIVLT GASIAVAGMI MQILMRNRFV
EPSMAGAGQS AALGLLLMSL 101 LLPAAPLPVK MSVAAVAALI GMLVFMLLIR
RLPPTAQLMV PLVGXIFGGV 151 VEAVATFVAY EFEMLQMLGV WQQGDFSSVL
LGRYELLWIT GGLAVFAYLI 201 ADRLTILGLG ETVSVNLGLN RTAVLWSGLI
IVALITSLVI VTVGNIPFIG 251 LVVPNIVSRL MGDRLRQSLP AVALLGASLV
LLCDIIGRMI VFPFEIPVST 301 VFGVLGTALF LWLLLRKPAY AV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2023>:
TABLE-US-02411 m629.seq 1 ATGACTGCCA AACCTTTTTC CCTCAACCTG
ACCAACCTGC TGCTGCTGGC 51 GGTGTTGTTT GCCGTCAGCC TGTCGGTGGG
CGTTGCCGAT TTCCGCTGGT 101 CTGATGTGTT TTCACTGTCC GACAGCCAGC
AGGTCATGTT CATCAGCCGC 151 CTGCCGCGCA CGTTTGCGAT TGTGCTGACG
GGCGCGTCGA TGGCGGTGGC 201 CGGCATGATT ATGCAGATTT TGATGCGCAA
CCGTTTTGTC GAACCGTCGA 251 TGGTGGGCGC AAGCCAAAGC GCGGCTTTAG
GTTTGCTGCT GATGACCCTG 301 CTGCTGCCGG CCGCGCCGCT GCCGGCGAAA
ATGTCGGTTG CCGCCGTTGC 351 CGCGCTGATC GGGATGTTGG TCTTTATGCT
GCTGATCCGC CGCCTGCCGC 401 CGACCGCGCA ACTGATGGTG CCTTTGGTCG
GGATTATTTT CGGCGGTGTG 451 ATTGAGGCGG TAGCCACCTT TATCGCGTAT
GAAAACGAAA TGCTGCAAAT 501 GCTCGGCGTG TGGCAGCAGG GCGATTTTTC
GAGCGTGCTG CTGGGGCGGT 551 ACGAGCTGCT TTGGATTACG GGCGGTTTGG
CGGTGTTTGC CTATCTGATT 601 GCCGACCGGC TGACGATTTT GGGGCTGGGC
GAAACGGTAA GCGTGAATTT 651 GGGTTTGAAC CGGACGGCGG TGTTGTGGTC
GGGTTTGATT ATTGTGGCTT 701 TGATTACGTC GCTGGTTATC GTTACGGTCG
GCAATATTCC GTTTATCGGG 751 CTGGTCGTGC CGAACATCAT CAGCCGCCTG
ATGGGCGACA GGTTGCGCCA 801 AAGCCTGCCT GCGGTGGCCT TGCTGGGCGC
ATCTTTGGTG TTGCTGTGCG 851 ACATTATCGG ACGCGTGATT GTGTTTCCGT
TTGAAATTCC GGTCTCTACG 901 GTTTTTGGTG TATTGGGTAC GGCTTTGTTT
TTGTGGCTTT TGTTGAGGAA 951 ACCCGCCTAT GCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 2024; ORF
629>:
TABLE-US-02412 m629.pep 1 MTAKPFSLNL TNLLLLAVLF AVSLSVGVAD
FRWSDVFSLS DSQQVMFISR 51 LPRTFAIVLT GASMAVAGMI MQILMRNRFV
EPSMVGASQS AALGLLLMTL 101 LLPAAPLPAK MSVAAVAALI GMLVFMLLIR
RLPPTAQLMV PLVGIIFGGV 151 IEAVATFIAY ENEMLQMLGV WQQGDFSSVL
LGRYELLWIT GGLAVFAYLI 201 ADRLTILGLG ETVSVNLGLN RTAVLWSGLI
IVALITSLVI VTVGNIPFIG 251 LVVPNIISRL MGDRLRQSLP AVALLGASLV
LLCDIIGRVI VFPFEIPVST 301 VFGVLGTALF LWLLLRKPAY AV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02413 m629/g629 95.7% identity in 322 aa overlap 10 20 30
40 50 60 m629.pep
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLT
||||||||||:|||| |||||||||||:|||||||||||||||||||||||||||||||| g629
MTAKPFSLNLANLLLPAVLFAVSLSVGIADFRWSDVFSLSDSQQVMFISRLPRTFAIVLT 10 20
30 40 50 60 70 80 90 100 110 120 m629.pep
GASMAVAGMIMQILMRNRFVEPSMVGASQSAALGLLLMTLLLPAAPLPAKMSVAAVAALI
|||:||||||||||||||||||||:||:||||||||||:|||||||||:||||||||||| g629
GASIAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALI 70 80
90 100 110 120 130 140 150 160 170 180 m629.pep
GMLVFMLLIRRLPPTAQLMVPLVGIIFGGVIEAVATFIAYENEMLQMLGVWQQGDFSSVL
|||||||||||||||||||||||| |||||: ||||||:||| |||||||||||||||||| g629
GMLVFMLLIRRLPPTAQLMVPLVGXIFGGVVEAVATFVAYEFEMLQMLGVWQQGDFSSVL 130
140 150 160 170 180 190 200 210 220 230 240 m629.pep
LGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g629
LGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI 190
200 210 220 230 240 250 260 270 280 290 300 m629.pep
VTVGNIPFIGLVVPNIISRLMGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVST
||||||||||||||||:|||||||||||||||||||||||||||||||:||||||||||| g629
VTVGNIPFIGLVVPNIVSRLMGDRLRQSLPAVALLGASLVLLCDIIGRMIVFPFEIPVST 250
260 270 280 290 300 310 320 m629.pep VFGVLGTALFLWLLLRKPAYAVX
||||||||||||||||||||||| g629 VFGVLGTALFLWLLLRKPAYAVX 310 320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2025>:
TABLE-US-02414 a629.seq 1 ATGACTGCCA AACCTTTTTC CCTCAACCTG
ACTAACCTCC TGCTGCTGGC 51 GGTGTTGTTT GCCGTCAGCC TGTCGGTGGG
CGTTGCCGAT TTCCGCTGGT 101 CGGATGTGTT TTCGCTGTCG GACAGCCAGC
AGGTTATGTT CATCAGCCGC 151 CTGCCGCGCA CGTTTGCGAT TGTGTTGACG
GGCGCGTCGA TGGCGGTGGC 201 GGGGATGATT ATGCAGATTC TGATGCGTAA
CCGTTTTGTC GAGCCTTCTA 251 TGGCGGGCGC GGGTCAGAGT GCGGCTTTGG
GTTTGCTTCT GATGTCCCTG 301 CTGCTGCCTG CCGCGCCGCT GCCGGTCAAA
ATGTCGGTTG CCGCCGTTGC 351 CGCGTTAATC GGGATGTTGG TGTTTATGAT
GCTTATCCGC CGCCTGCCGC 401 CGACGGCGCA ACTGATGGTG CCTTTGGTCG
GGATTATTTT CGGCGGCGTG 451 GTTGAGGCGG TGGCCACCTT TATTGCGTAT
GAAAACGAAA TGCTGCAAAT 501 GCTGGGCGTG TGGCAACAGG GCGATTTTTC
CGGCGTGTTG CTCGGACGGT 551 ATGAACTGTT GTGGGCAACG GGGATTTTGG
CTTTGTTTGC CTATTTGATT 601 GCCGACCAGC TGACGATTTT GGGTTTGGGC
GAAACGGTAA GCGTGAACTT 651 GGGGCTGAAC CGGACGGCGA TTCTGTGGTC
GGGGCTGATT ATTGTGGCTT 701 TGATTACGTC GCTGGTTATC GTTACGGTCG
GCAATATTCC GTTTATCGGG 751 CTGGTCGTGC CGAACATCAT CAGCCGCCTG
ATAGGCGACA GGCTGCGCCA 801 AAGCCTGCCT GCGGTGGCTT TGCTGGGTGC
GTCTTTGGTT TTATTGTGCG 851 ACATTATCGG ACGAGTGATT GTGTTTCCGT
TTGAAATTCC GGTATCGACC 901 GTCTTCGGCG TATTGGGTAC GGCGTTGTTT
TTATGGCTTT TGTTAAGGAA 951 ACCTGCTCAT GCCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 2026; ORF
629.a>:
TABLE-US-02415 a629.pep 1 MTAKPFSLNL TNLLLLAVLF AVSLSVGVAD
FRWSDVFSLS DSQQVMFISR 51 LPRTFAIVLT GASMAVAGMI MQILMRNRFV
EPSMAGAGQS AALGLLLMSL 101 LLPAAPLPVK MSVAAVAALI GMLVFMMLIR
RLPPTAQLMV PLVGIIFGGV 151 VEAVATFIAY ENEMLQMLGV WQQGDFSGVL
LGRYELLWAT GILALFAYLI 201 ADQLTILGLG ETVSVNLGLN RTAILWSGLI
IVALITSLVI VTVGNIPFIG 251 LVVPNIISRL IGDRLRQSLP AVALLGASLV
LLCDIIGRVI VFPFEIPVST 301 VFGVLGTALF LWLLLRKPAH AV* m629/a629 95.7%
identity in 322 aa overlap 10 20 30 40 50 60 m629.pep
MTAKPFSLNLNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a629
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLT 10 20
30 40 50 60 70 80 90 100 110 120 m629.pep
GASMAVAGMIMQILMRNRFVEPSMVGASQSAALGLLLMTLLLPAAPLPAKMSVAAVAALI
||||||||||||||||||||||||:||:||||||||||:|||||||||:||||||||||| a629
GASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALI 70 80
90 100 110 120 130 140 150 160 170 180 m629.pep
GMLVFMLLIRRLPPTAQLMVPLVGIIFGGVIEAVATFIAYENEMLQMLGVWQQGDFSSVL
||||||:|||||||||||||||||||||||:||||||||||||||||||||||||||:|| a629
GMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAYENEMLQMLGVWQQGDFSGVL 130
140 150 160 170 180 190 200 210 220 230 240 m629.pep
LGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
|||||||| || ||:|||||||:||||||||||||||||||||:|||||||||||||||| a629
LGRYELLWATGILALFAYLIADQLTILGLGETVSVNLGLNRTAILWSGLIIVALITSLVI 190
200 210 220 230 240 250 260 270 280 290 300 m629.pep
VTVGNIPFIGLVVPNIISRLMGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVST
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| a629
VTVGNIPFIGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVST 250
260 270 280 290 300 310 320 m629.pep VFGVLGTALFLWLLLRKPAYAVX
|||||||||||||||||||:||| a629 VFGVLGTALFLWLLLRKPAHAVX 310 320
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2027>:
TABLE-US-02416 g630.seq (partial) 1 aTgatGATTT TGGTGTGGCT
ggctttgttt ccccccatgt tttacggcat 51 gtacaacgtc GGCGCACAGG
CATTCGGTGC CTTAACGCCC GAtttgctgc 101 aacaaagcat cgcccacgac
ggcaattacg ccctcgccaa cgctttgggc 151 atcaatatgt cccccgaaGc
gggcgtgtTg ggcaaaatgc tgttcgGCGC 201 GATttacttc ctgccgattt
acgcgaccgt aTTTATTGTG GGcggcttct 251 ggGaagtCTT GTTCGCATCc
gtACGCAAAC ACGAAATCAA CGAAGGTTTC 301 TTCGTTACTT CGATTCTGTT
TGCCTTAATC GTTCCGCCCA CGCTGCCGCT 351 GTGGCAGGCG GCTTTGGGTA
TTTCTTTCGG CGTTGTGGTT GCGAAAGAAG 401 TATTCGGCGG TACAGGTAAA
AACTTCATGA ACCCTGCGCT GGCAGGCCGC 451 GCCTTCCTGT TCTTCGCCTA
CCCCGCCAAC TTGAGCGGCG ATGCGGTTTG 501 GACGGCGGTT GACGGCTATT
CCGGCGCAAC CGCGCTGGCG CAATGGGCGG 551 CACACGGTGC AGACGGCCTG
AAAAACGCCG TAACCGGTCA AACCATCACT 601 TGGATGGACG CGTTTATCGG
CAAACTGCCC GGCTCCATCG GCGAAGTCTC 651 CACTTTGGCA CTCTTAATCG
GCGGCGCGTT TATCGTGTTT GCCCGCATCG 701 CTtcttgGCG CATTATTGCc
ggCGTGATGA TCGGTatGat tGcgatgTCT 751 tcgctgatta acttcatCGg
ttctgacacc aaagctatgt ttgctatgca 801 cttggtacat ggcacttggt
GGAaagatGa ttAtcactca ctgtacatta 851 aa.....
This corresponds to the amino acid sequence <SEQ ID 2028; ORF
630.ng>:
TABLE-US-02417 g630.pep 1 MMILVWLALF PPMFYGMYNV GAQAFGALTP
DLLQQSIAHD GNYALANALG 51 INMSPEAGVL GKMLFGAIYF LPIYATVFIV
GGFWEVLFAS VRKHEINEGF 101 FVTSILFALI VPPTLPLWQA ALGISFGVVV
AKEVFGGTGK NFMNPALAGR 151 AFLFFAYPAN LSGDAVWTAV DGYSGATALA
QWAAHGADGL KNAVTGQTIT 201 WMDAFIGKLP GSIGEVSTLA LLIGGAFIVF
ARIASWRIIA GVMIGMIAMS 251 SLINFIGSDT KAMFAMHLVH GTWWKDDYHS
LYIK....
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2029>:
TABLE-US-02418 m630.seq 1 ATGATGATTT TGGTGTGGCT GGCTTTGTTC
CCTGCCATGT TCTACGGTAT 51 GTACAACGTC GGCGCGCAGG CATTCGGTGC
GTTAACGCCT GATTTGCTGC 101 AACAAAACAT CGCCAACGAC TGGCATTACG
CCTTTGCCAA CGCTTTGGGC 151 ATCAATATGT CGTCTGAAGC GGGCGTGTCG
GACAAAATGC TGTTTGGCGC 201 GATTTACTTC CTGCCGATTT ACGCGACTGT
ATTTGTTGTG GGCGGTTTCT 251 GGGAAGTTTT GTTCGCCACC GTGCGCAAAC
ACGAAATCAA CGAAGGTTTC 301 TTCGTTACTT CGATTCTGTT TGCCTTAATC
GTTCCGCCCA CGCTGCCGCT 351 GTGGCAGGCG GCTTTGGGTA TTTCTTTCGG
CGTTGTGGTT GCGAAAGAAG 401 TATTCGGCGG TACAGGTAAA AACTTCATGA
ACCCTGCGCT GGCAGGCCGT 451 GCTTTCCTGT TCTTCGCCTA CCCTGCCAAC
TTGAGCGGCG ATGCGGTTTG 501 GACGGCGGTT GACGGCTATT CCGGCGCAAC
CGCACTGGCG CAATGGGCGG 551 CACACGGTGC AGACGGCCTG AAAAACGCCG
TAACCGGTCA AACCATCACT 601 TGGATGGACG CGTTTATCGG CAAACTGCCC
GGCTCCATTG GCGAAGTCTC 651 CACTTTGGCA CTCTTAATCG GCGGCGCGTT
TATCGTGTTT GCCCGCATCG 701 CTTCTTGGCG CATTATTGCC GGCGTGATGA
TCGGTATGAT TGCGATGTCT 751 TCGCTGTTCA ACTTCATCGG TTCGGACACC
AACGCTATGT TTGCTATGCC 801 TTGGTACTGG CACTTGGTGG TCGGCGGCTT
CGCCATCGGT ATGCTGTTTA 851 TGGCGACCGA CCCTGTTTCC GCTTCCTTTA
CCAATGTCGG CAAATGGTGG 901 TACGGCGCAC TGATCGGTGT GATGTGCGTA
TTAATCCGCG TGGTCAATCC 951 GGCTTACCCC GAAGGCATGA TGTTGGCGAT
TCTGTTTGCC AACCTGTTTG 1001 CCCCGATTTT CGACTATTTC GTCGCACAAG
CGAACATCAA ACGCAGAAAG 1051 GCGCGCAGCA ATGGCTAA
This corresponds to the amino acid sequence <SEQ ID 2030; ORF
630>:
TABLE-US-02419 m630.pep 1 MMILVWLALF PAMFYGMYNV GAQAFGALTP
DLLQQNIAND WHYAFANALG 51 INMSSEAGVS DKMLFGAIYF LPIYATVFVV
GGFWEVLFAT VRKHEINEGF 101 FVTSILFALI VPPTLPLWQA ALGISFGVVV
AKEVFGGTGK NFMNPALAGR 151 AFLFFAYPAN LSGDAVWTAV DGYSGATALA
QWAAHGADGL KNAVTGQTIT 201 WMDAFIGKLP GSIGEVSTLA LLIGGAFIVF
ARIASWRIIA GVMIGMIAMS 251 SLFNFIGSDT NAMFAMPWYW HLVVGGFAIG
MLFMATDPVS ASFTNVGKWW 301 YGALIGVMCV LIRVVNPAYP EGMMLAILFA
NLFAPIFDYF VAQANIKRRK 351 ARSNG* m630/g630 93.5% identity in 275 aa
overlap 10 20 30 40 50 60 m630.pep
MMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQNIANDWHYAFANALGINMSSEAGVS
||||||||||| |||||||||||||||||||||||:||:|:| ||:||||||||| |||| g630
MMILVWLALFPPMFYGMYNVGAQAFGALTPDLLQQSIAHDGNYALANALGINMSPEAGVL 10 20
30 40 50 60 70 80 90 100 110 120 m630.pep
DKMLFGAIYFLPIYATVFVVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQA
|||||||||||||||||:||||||||||:|||||||||||||||||||||||||||||| g630
GKMLFGAIYFLPIYATVFIVGGFWEVLFASVRKHEINEGFFVTSILFALIVPPTLPLWQA 70 80
90 100 110 120 130 140 150 160 170 180 m630.pep
ALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSGDAVWTAVDGYSGATALA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g630
ALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSGDAVWTAVDGYSGATALA 130
140 150 160 170 180 190 200 210 220 230 240 m630.pep
QWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLALLIGGAFIVFARIASWRIIA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g630
QWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLALLIGGAFIVFARIASWRIIA 190
200 210 220 230 240 250 260 270 280 290 300 m630.pep
GVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWW
||||||||||||:|||||||:||||| ||| | g630
GVMIGMIAMSSLINFIGSDTKAMFAM----HLVHGTWWKDDYHSLYIK. 250 260 270 280
310 320 330 340 350 m630.pep
YGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNGX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2031>:
TABLE-US-02420 a630.seq 1 ATGATGATTT TGGTGTGGCT GGCTTTGTTC
CCTGCCATGT TCTACGGTAT 51 GTACAACGTC GGCGCACAGG CATTCGGTGC
GTTAACGCCC GATTTGCTGC 101 AACAAAGCAT CGCCAACGAC TGGCATTACG
CCCTTGCCAA CGCTTTGGGC 151 ATCAATATGT CGTCTGAAGC GGGCGTGTTG
GGCAAAATGC TGTTCGGCGC 201 GATTTACTTC CTGCCGATTT ACGCGACCGT
ATTTATTGTC GGCGGTTTCT 251 GGGAAGTTTT GTTCGCCACC GTGCGCAAAC
ATGAAATCAA CGAAGGTTTC 301 TTTGTTACCT CGATTCTGTT TGCCTTAATC
GTTCCGCCCA CGCTGCCGCT 351 GTGGCAGGCA GCTTTGGGTA TTTCTTTCGG
CGTTGTGGTT GCGAAAGAAG 401 TATTCGGCGG TACAGGTAAA AACTTCATGA
ACCCTGCGCT GGCAGGCCGT 451 GCCTTCCTGT TCTTCGCCTA CCCTGCCAAC
TTGAGCGGCG ATGCGGTTTG 501 GACGGCGGTT GACGGCTATT CCGGCGCAAC
CGCGCTGGCG CAATGGGCGG 551 CACACGGTGC AGACGGCCTG AAAAACGCCA
TAACCGGTCA AACCATCACT 601 TGGATGGATG CGTTTATCGG CAAACTGCCC
GGCTCCATCG GCGAAGTCTC 651 CACTTTGGCA CTCTTAATCG GCGGCGCGTT
TATCGTGTTT GCCCGCATCG 701 CTTCTTGGCG CATTATTGCC GGCGTGATGA
TCGGTATGAT TGCCATGTCT 751 TCGCTGTTCA ACTTCATCGG TTCGGACACC
AACGCTATGT TTGCTATGCC 801 TTGGTACTGG CATTTGGTCG TCGGCGGCTT
CGCCATCGGT ATGCTGTTTA 851 TGGCGACCGA CCCCGTTTCC GCTTCCTTTA
CCAATGTCGG CAAATGGTGG 901 TACGGCGCAC TGATCGGTGT GATGTGCGTA
TTAATCCGCG TGGTCAATCC 951 GGCTTACCCC GAAGGCATGA TGTTGGCGAT
TCTGTTTGCC AACCTGTTTG 1001 CCCCGATTTT CGACTATTTC GTCGCACAAG
CGAACATCAA ACGCAGAAAG 1051 GCGCGCAGCA ATGGCTAA
This corresponds to the amino acid sequence <SEQ ID 2032; ORF
630.a>:
TABLE-US-02421 a630.pep 1 MMILVWLALF PAMFYGMYNV GAQAFGALTP
DLLQQSIAND WHYALANALG 51 INMSSEAGVL GKMLFGAIYF LPIYATVFIV
GGFWEVLFAT VRKHEINEGF 101 FVTSILFALI VPPTLPLWQA ALGISFGVVV
AKEVFGGTGK NFMNPALAGR 151 AFLFFAYPAN LSGDAVWTAV DGYSGATALA
QWAAHGADGL KNAITGQTIT 201 WMDAFIGKLP GSIGEVSTLA LLIGGAFIVF
ARIASWRIIA GVMIGMIAMS 251 SLFNFIGSDT NAMFAMPWYW HLVVGGFAIG
MLFMATDPVS ASFTNVGKWW 301 YGALIGVMCV LIRVVNPAYP EGMMLAILFA
NLFAPIFDYF VAQANIKRRK 351 ARSNG* m630/a630 98.3% identity in 355 aa
overlap 10 20 30 40 50 60 m630.pep
MMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQNIANDWHYAFANALGINMSSEAGVS
|||||||||||||||||||||||||||||||||||:||||||||:|||||||||||||| a630
MMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALANALGINMSSEAGVL 10 20
30 40 50 60 70 80 90 100 110 120 m630.pep
DKMLFGAIYFLPIYATVFVVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQA
|||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| a630
GKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQA 70 80
90 100 110 120 130 140 150 160 170 180 m630.pep
ALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSGDAVWTAVDGYSGATALA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a630
ALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSGDAVWTAVDGYSGATALA 130
140 150 160 170 180 190 200 210 220 230 240 m630.pep
QWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLALLIGGAFIVFARIASWRIIA
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| a630
QWAAHGADGLKNAITGQTITWMDAFIGKLPGSIGEVSTLALLIGGAFIVFARIASWRIIA 190
200 210 220 230 240 250 260 270 280 290 300 m630.pep
GVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a630
GVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWW 250
260 270 280 290 300 310 320 330 340 350 m630.pep
YGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNGX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a630
YGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNGX 310 320
330 340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2033>:
TABLE-US-02422 g635.seq 1 ATGACCCGGC GACGGGTCGG CAAGCAAAAC
CGTATTGCCA TCCACTCCGC 51 GCAATACCGA AAAATGGTCG TCTTTGCGGT
ATTTCAGATA CACGATGACG 101 GGGATTTTCA ACTGCGCGAG CTGTTCGAAA
GACAGGGCAT AGCCTTTCGC 151 CTCAAAACCC AAATCGGGCA TAATGCGCCG
CATATCCTCA AACGACGCGC 201 GCATCTGTTC CTTACCCAGT TTTTCCAACA
CTTCTTCTTC CGTCAGCTTT 251 TGCCCGTAAA AATTGTTCAA AAGCGTCGCC
ACCGAAGCCG CCCCGCAGGA 301 AAAATCCAAA TCCTGCTTTA CAATATTGAA
ATCCCGCCGC GCTTTCCAAC 351 TCTGCAATTT GATTTTTCCG TAAACAACAG
GATTATCGTT AAACATCGGT 401 GCAGCATTCA AACGATAAGA CAAGGGTCTG
TACCAGATTA G
This corresponds to the amino acid sequence <SEQ ID 2034; ORF
635.ng>:
TABLE-US-02423 g635.pep 1 MTRRRVGKQN RIAIHSAQYR KMVVFAVFQI
HDDGDFQLRE LFERQGIAFR 51 LKTQIGHNAP HILKRRAHLF LTQFFQHFFF
RQLLPVKIVQ KRRHRSRPAG 101 KIQILLYNIE IPPRFPTLQF DFSVNNRIIV
KHRCSIQTIR QGSVPD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2035>:
TABLE-US-02424 m635.seq 1 ATGACCCAGC GACGGGTCGG CAAGCAAAAC
CGTATTGCCG TCTATACCGC 51 GCAATACCGA GAAATGATCA TCCTTGCGGT
ATTTCAGATA CACGATGACG 101 GGGATTTGCA ACTGTGCAAG CTGCTCGAAA
GACAGGGCAT AGCCTTTCGC 151 TTCAAAACCC AAATCAGGCA TAATGCGCCG
CATATCCTCA AACGACGCGG 201 GCATCTGCTC CTTATCCAGT TTTTTTAACA
CGTCCTCTTC CGTCAGCTTT 251 TGCCCGTAAA AATTGTTCAA AAGCGTCACC
ACCGAAGCCG CCCCGCAGGA 301 AAAATCCAAA TCCTGCTTTA CAATATTGAA
ATCGCGCCTT TCTTTCCAAC 351 TCTGCACTTT GATTTTTCCA TAAGCAACAG
GATTATAGTG GATTAA
This corresponds to the amino acid sequence <SEQ ID 2036; ORF
635>:
TABLE-US-02425 m635.pep 1 MTQRRVGKQN RIAVYTAQYR EMIILAVFQI
HDDGDLQLCK LLERQGIAFR 51 FKTQIRHNAP HILKRRGHLL LIQFF*HVLF
RQLLPVKIVQ KRHHRSRPAG 101 KIQILLYNIE IAPFFPTLHF DFSISNRIIV D*
m635/g635 80.0% identity in 130 aa overlap 10 20 30 40 50 60
m635.pep
MTQRRVGKQNRIAVYTAQYREMIILAVFQIHDDGDLQLCKLLERQGIAFRFKTQIRHNAP
||:||||||||||:::||||:|:::||||||||||:|| :|:||||||||:|||| |||| g635
MTRRRVGKQNRIAIHSAQYRKMVVFAVFQIHDDGDFQLRELFERQGIAFRLKTQIGHNAP 10 20
30 40 50 60 70 80 90 100 110 120 m635.pep
HILKRRGHLLLIQFFXHVLFRQLLPVKIVQKRHHRSRPAGKIQILLYNIEIAPFFPTLHF
||||||:||:| ||| | :|||||||||||||:|||||||||||||||||| | ||||:| g635
HILKRRAHLFLTQFFQHFFFRQLLPVKIVQKRRHRSRPAGKIQILLYNIEIPPRFPTLQF 70 80
90 100 110 120 130 m635.pep DFSISNRIIVDX |||::||||| g635
DFSVNNRIIVKHRCSIQTIRQGSVPDX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2037>:
TABLE-US-02426 a635.seq 1 ATGACCCAGC GACGGGTCGG CAAGCAAAAC
CGTATTGCCG TCTATACCGC 51 GCAATACCGA GAAATGATCA TCCTTGCGGT
ATTTCAGATA CACGATGACG 101 GGGATTTGCA ACTGTGCAAG CTGCTCGAAA
GACAGGGCAT AGCCTTTCGC 151 CTCAAAACCC AAATCAGGCA TGATGCGCCG
CATATCCTCA AACGACGCGC 201 GCATCTGCTC CTTATCCAGC TTTTTCAACA
CGTCCTCTTC CGTCAGCTTT 251 TGCCCGTGAA AATTGTTCAA AAGCGTCGCC
ACCGAAGCCG CCCCGCAGGA 301 AAAATCCAAA TCCTGCTTTA CAATATTGAA
ATCGCGCCTT TCTTTCCAAC 351 TCTGCACTTT GATTTTTCCA TAAGCAACAG
GATTATAGTG GATTAA
This corresponds to the amino acid sequence <SEQ ID 2038; ORF
635.a>:
TABLE-US-02427 a635.pep 1 MTQRRVGKQN RIAVYTAQYR EMIILAVFQI
HDDGDLQLCK LLERQGIAFR 51 LKTQIRHDAP HILKRRAHLL LIQLFQHVLF
RQLLPVKIVQ KRRHRSRPAG 101 KIQILLYNIE IAPFFPTLHF DFSISNRIIV D*
m635/a635 95.4% identity in 131 aa overlap 10 20 30 40 50 60
m635.pep
MTQRRVGKQNRIAVYTAQYREMIILAVFQIHDDGDLQLCKLLERQGIAFRFKTQIRHNAP
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||:|| a635
MTQRRVGKQNRIAVYTAQYREMIILAVFQIHDDGDLQLCKLLERQGIAFRLKTQIRHDAP 10 20
30 40 50 60 70 80 90 100 110 120 m635.pep
HILKRRGHLLLIQFFXHVLFRQLLPVKIVQKRHHRSRPAGKIQILLYNIEIAPFFPTLHF
||||||:||||||:| ||||||||||||||||:||||||||||||||||||||||||||| a635
HILKRRAHLLLIQLFQHVLFRQLLPVKIVQKRRHRSRPAGKIQILLYNIEIAPFFPTLHF 70 80
90 100 110 120 130 m635.pep DFSISNRIIVDX |||||||||||| a635
DFSISNRIIVDX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2039>:
TABLE-US-02428 g638.seq 1 ATGATTGGCG GACAGTTTAT CGTAGttgGc
atTGTAGGCA AAAACGCACT 51 TGCCCGCTTT GTTGATAATA ttgtcGTGAA
TAtcGGAATA GTTGACATAG 101 TTGAGCATGA TGCCCTAATC GCGGCTGCCG
ACGGCGATAT TGTCGAACAC 151 TTTGAGCCGT TCGGAAAACA TCAGCACATA
GCCCATATTG TtgcCCACGG 201 AAATATTGCC GCTGacttcg ctgtcgTTGG
TGTACATATA GTGGACGGCG 251 AAACGCAGGT CGCTGAAGCG GTTGTTTTTA
TAGGTGTTGT GCGTGCTGGT 301 ATTGGAAAAA ATGCCGTCCC GCCCTTTGGA
AATGTCGTTG ccgACGACCT 351 GCGCgccggg CgcgtTCCAA ACGGTAACGC
CATTGCCGCG CTCATTCACG 401 CGCAAGGTcg catcgCCGAC GATTTTATTC
TCGCGCACCA TCGCATCGGC 451 AGAACCATGA AGGTATACGC CGAACGAATT
ATCAAAAATA TTGTTGTGTT 501 CAACCAGGGC GCGCGGGGCG GCTTTTTCGA
GATAAATACC GGCATCCATT 551 GCTGGCAGGC TCATACCGGA ACGGGTAACG
GTCAGGTTGC GGAGCGTTAC 601 GTCCGGCGCG TGTACGGCTA TGGTACGCCC
GCTCTTGTCC CCTTCGATGG 651 TTGCGGAACG GTCGGCAGGC CCTTCAATCG
TAATCGGTTT GTCGATATAA 701 AGTTTGGTTT GATATACGCC GGAAGCCAGT
TTGATCGTAT CGCCCGCCCG 751 GGCGCGGGCA AAAATTTCGG CAAGGTTGTC
TTGCGGGGAA ACGTGGACGA 801 CGGCTGCCGA TGCCGTCTGA AAAATGCTGC
CGGCGGCAAG TATCAGCACG 851 GCCTTCAGCC ATATACGGAG CGCGGATGTG
TGCATAGTGT CCCTCTGTTT 901 CGTTCGGTAT GGCCGAACAA AATAAAGCAT
CATTCAAATG TGCCTGTTTT 951 TATAGCGAAA CCGCCTGAAA CGGTACGGCA
AGCGGTTTGG CTATAA
This corresponds to the amino acid sequence <SEQ ID 2040; ORF
638.ng>:
TABLE-US-02429 g638.pep 1 MIGGQFIVVG IVGKNALARF VDNIVVNIGI
VDIVEHDALI AAADGDIVEH 51 FEPFGKHQHI AHIVAHGNIA ADFAVVGVHI
VDGETQVAEA VVFIGVVRAG 101 IGKNAVPPFG NVVADDLRAG RVPNGNAIAA
LIHAQGRIAD DFILAHHRIG 151 RTMKVYAERI IKNIVVFNQG ARGGFFEINT
GIHCWQAHTG TGNGQVAERY 201 VRRVYGYGTP ALVPFDGCGT VGRPFNRNRF
VDIKFGLIYA GSQFDRIARP 251 GAGKNFGKVV LRGNVDDGCR CRLKNAAGGK
YQHGLQPYTE RGCVHSVPLF 301 RSVWPNKIKH HSNVPVFIAK PPETVRQAVW L*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2041>:
TABLE-US-02430 m638.seq 1 ATGATTGGCG AAAAGTTTAT CGTAGTTGGC
ATTATAGGCA AATACGCACT 51 TGCCTGCCTT GTTGATAATG TTGTCGTGAA
TATCGGAATA GTTGACATAG 101 TTGAGCATAA TGCCCTGATC GCGGCTGCCG
ACGGCGATAT TGTCGAATAC 151 TTTGAGCCGC TCGGAAAACA TCAGCACATA
GCCCATATTG TTGCCCACGG 201 AAATATTGCC GCTGATTTCG CTGTCGTTGG
TGTACATATA GTGGACGGCG 251 AAACGCAAAT CGCTGAAGCG GTTGTTTTTG
TAGGTGTTGT GCGTGCTGGT 301 ATTGGAAAAA ATGCCGTCCC GCCCTTTGGA
AATGTCGTTG CCGACGACCT 351 GCGCACCGGG TGCGTTCCAA ACGGTAACGC
CGTTGCCGCG CTCGTTCACG 401 CGCAAAGTCG CGTCGCCGAC GATTTTATTC
TCGCGCACCA TCGCATCGGC 451 AGAACCATGC AGATATACGC CGACCGAATT
ATCCAAAATA TTGTTGTGTT 501 CAATCAGGGC GCGCGGGGCA GTTTCTTCGA
GATAAATACC GGCATCCATT 551 GCGGGCAGGC TCATACCGGA ACGGGTAACG
GTCAGGTTGC GGAGCGTTAC 601 GTCCGGCGCG TGTACGGCTA TGGTACGCCC
GCTCCTGTCG CCTTCGATGG 651 TTGCGGAACG GTCGGCAGGC CCTTCAATCG
TAATCGGTTT GTCAATGTGA 701 AGTTTGGTTT TATATACGCC GGAAGCCAGT
TTGAGCGTAT CGCCCGCCCG 751 GGCGCGGGCA AATGCGGGAT ACCGATCAGC
ATAATCGGTT CGTGA
This corresponds to the amino acid sequence <SEQ ID 2042; ORF
638>:
TABLE-US-02431 m638.pep 1 MIGEKFIVVG IIGKYALACL VDNVVVNIGI
VDIVEHNALI AAADGDIVEY 51 FEPLGKHQHI AHIVAHGNIA ADFAVVGVHI
VDGETQIAEA VVFVGVVRAG 101 IGKNAVPPFG NVVADDLRTG CVPNGNAVAA
LVHAQSRVAD DFILAHHRIG 151 RTMQIYADRI IQNIVVFNQG ARGSFFEINT
GIHCGQAHTG TGNGQVAERY 201 VRRVYGYGTP APVAFDGCGT VGRPFNRNRF
VNVKFGFIYA GSQFERIARP 251 GAGKCGIPIS IIGS* m638/g638 88.2% identity
in 254 aa overlap 10 20 30 40 50 60 m638.pep
MIGEKFIVVGIIGKYALACLVDNVVVNIGIVDIVEHNALIAAADGDIVEYFEPLGKHQHI |||
:||||||:|| ||| :|||:||||||||||||:||||||||||||:|||:|||||| g638
MIGGQFIVVGIVGKNALARFVDNIVVNIGIVDIVEHDALIAAADGDIVEHFEPFGKHQHI 10 20
30 40 50 60 70 80 90 100 110 120 m638.pep
AHIVAHGNIAADFAVVGVHIVDGETQIAEAVVFVGVVRAGIGKNAVPPFGNVVADDLRTG
||||||||||||||||||||||||||:||||||:||||||||||||||||||||||||:| g638
AHIVAHGNIAADFAVVGVHIVDGETQVAEAVVFIGVVRAGIGKNAVPPFGNVVADDLRAG 70 80
90 100 110 120 130 140 150 160 170 180 m638.pep
CVPNGNAVAALVHAQSRVADDFILAHHRIGRTMQIYADRIIQNIVVFNQGARGSFFEINT
|||||||:|||:|||:|:|||||||||||||||::||:|||:|||||||||||:|||||| g638
RVPNGNAIAALIHAQGRIADDFILAHHRIGRTMKVYAERIIKNIVVFNQGARGGFFEINT 130
140 150 160 170 180 190 200 210 220 230 240 m638.pep
GIHCGQAHTGTGNGQVAERYVRRVYGYGTPAPVAFDGCGTVGRPFNRNRFVNVKFGFIYA ||||
|||||||||||||||||||||||||| | |||||||||||||||||::|||:||| g638
GIHCWQAHTGTGNGQVAERYVRRVYGYGTPALVPFDGCGTVGRPFNRNRFVDIKFGLIYA 190
200 210 220 230 240 250 260 m638.pep GSQFERIARPGAGKCGIPISIIGSX
||||:||||||||| g638
GSQFDRIARPGAGKNFGKVVLRGNVDDGCRCRLKNAAGGKYQHGLQPYTERGCVHSVPLF 250
260 270 280 290 300
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2043>:
TABLE-US-02432 a638.seq 1 ATGATTGGCG GACAGTTTAT CGTAGTTGGC
ATTGTAGGCA AAAACGCACT 51 TGCCCGCTTT GTTGATAATG TTGTCGTGAA
TATCGGAATA GTTGACATAG 101 TTGAGCATGA TGCCTTGGTC GCGGCTGCCG
ACGGCGATAT TGTCAAACAC 151 TTTGAGCCGC TCGGAAAACA TCAGCACATA
GCCCATATTG TTGCCCACGG 201 AAATATTGCC GCTGATTTCG CTGTCGTTGG
TGTACATATA GTGGACGGCG 251 AAACGCAAAT CGCTGAAGCG GTTGTTTTTA
TAGGTGTTGT GCGTGCTGGT 301 ATTGGAAAAA ATGCCGTCCC GCCCTTTGGA
AATATCGTTG CCGACGACCT 351 GCGCGCCGGG CGCGTTCCAA ACGGTAACGC
CATTGCCGCG CTCGTTCACG 401 CGCAAAGTCG CGTCGCCGAC GATTTTATTC
TCCCGCACCA TCGCATCGGC 451 AGAACCATGC AGATAGACGC CGACCGAATT
ATCCAAAATA TTATTGTGTT 501 CAATCAGGGC GCGCGGGGCA GTTTCTTCGA
GATAAATACC GGCATCCATT 551 GCGGGCAGGC TCATACCGGA ACGGGTAACG
GTCAGGTTGC GGAGCGTTAC 601 GTCCGGCGCG TGTACGGCTA TGGTACGCCC
GCTCCTGTCT CCTTCGATGG 651 TTGCAGAACG GTCGGCAGGC CCTTCAATCG
TAATCGGTTT GTCGATGTGA 701 AGTTTGGTTT GATATACGCC GGAAGCCAGT
TTGAGCGTAT CGCCCGCCCG 751 GGCGCGGGCA AATGCGGGAT ACCGATCAGC
ATAATCGACT CATGGTGA
This corresponds to the amino acid sequence <SEQ ID 2044; ORF
638.a>:
TABLE-US-02433 a638.pep 1 MIGGQFIVVG IVGKNALARF VDNVVVNIGI
VDIVEHDALV AAADGDIVKH 51 FEPLGKHQHI AHIVAHGNIA ADFAVVGVHI
VDGETQIAEA VVFIGVVRAG 101 IGKNAVPPFG NIVADDLRAG RVPNGNAIAA
LVHAQSRVAD DFILPHHRIG 151 RTMQIDADRI IQNIIVFNQG ARGSFFEINT
GIHCGQAHTG TGNGQVAERY 201 VRRVYGYGTP APVSFDGCRT VGRPFNRNRF
VDVKFGLIYA GSQFERIARP 251 GAGKCGIPIS IIDSW* m638/a638 91.3%
identity in 264 aa overlap 10 20 30 40 50 60 m638.pep
MIGEKFIVVGIIGKYALACLVDNVVVNIGIVDIVEHNALIAAADGDIVEYFEPLGKHQHI |||
:||||||:|| ||| :||||||||||||||||:||:||||||||::|||||||||| a638
MIGGQFIVVGIVGKNALARFVDNVVVNIGIVDIVEHDALVAAADGDIVKHFEPLGKHQHI 10 20
30 40 50 60 70 80 90 100 110 120 m638.pep
AHIVAHGNIAADFAVVGVHIVDGETQIAEAVVFVGVVRAGIGKNAVPPFGNVVADDLRTG
|||||||||||||||||||||||||||||||||:|||||||||||||||||:||||||:| a638
AHIVAHGNIAADFAVVGVHIVDGETQIAEAVVFIGVVRAGIGKNAVPPFGNIVADDLRAG 70 80
90 100 110 120 130 140 150 160 170 180 m638.pep
CVPNGNAVAALVHAQSRVADDFILAHHRIGRTMQIYADRIIQNIVVFNQGARGSFFEINT
||||||:|||||||||||||||| |||||||||| ||||||||:||||||||||||||| a638
RVPNGNAIAALVHAQSRVADDFILPHHRIGRTMQIDADRIIQNIIVFNQGARGSFFEINT 130
140 150 160 170 180 190 200 210 220 230 240 m638.pep
GIHCGQAHTGTGNGQVAERYVRRVYGYGTPAPVAFDGCGTVGRPFNRNRFVNVKFGFIYA
|||||||||||||||||||||||||||||||||:|||| ||||||||||||:||||:||| a638
GIHCGQAHTGTGNGQVAERYVRRVYGYGTPAPVSFDGCRTVGRPFNRNRFVDVKFGLIYA 190
200 210 220 230 240 250 260 m638.pep GSQFERIARPGAGKCGIPISIIGSX
|||||||||||||||||||||| | a638 GSQFERIARPGAGKCGIPISIIDSWX 250
260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2045>:
TABLE-US-02434 g639-1.seq 1 ATGAGCCTGC CAGCAATGGA TGCCGGTATT
TATCTCGAAA AAGCCGCCCC 51 GCGCGCCCTG GTTGAACACA ACAATATTTT
TGATAATTCG TTCGGCGTAT 101 ACCTTCATGG TTCTGCCGAT GCGATGGTGC
GCGAGAATAA AATCGTCGGC 151 GATGCGACCT TGCGCGTGAA TGAGCGCGGC
AATGGCGTTA CCGTTTGGAA 201 CGCGCCCGGC GCGCAGGTCG TCGGCAACGA
CATTTCCAAA GGGCGGGACG 251 GCATTTTTTC CAATACCAGC ACGCACAACA
CCTATAAAAA CAACCGCTTC 301 AGCGACCTGC GTTTCGCCGT CCACTATATG
TACACCAACG ACAGCGAAGT 351 CAGCGGCAAT ATTTCCGTGG GCAACAATAT
GGGCTATGTG CTGATGTTTT 401 CCGAACGGCT CAAAGTGTTC GACAATATCG
CCGTCGGCAG CCGCGATTAG 451 GGCATCATGC TCAACTATGT CAACTATTCC
GATATTCACG ACAATATTAT 501 CAACAAAGCG GGCAAGTGCG TTTTTGCCTA
CAATGCCAAC TACGATAAAC 551 TGTCCGCCAA TCATTTTGAA AACTGCCAAA
TCGGCATGCA CTTTACCGCC 601 GCCATCGAAG GCACGTCCCT GCACGACAAT
TCCTTTATCA ACAACGGAAG 651 CCAGGTCAAA TATGTCAGTA CGCGCTTTCT
CGACTGGAGC GAGGGCGGAC 701 ACGGCAACTA CTGGAGCGAC AACAGCCCGT
TCGATTTGAA CGGCGACGGC 751 TTCGGAGACA GCGCGTACCG TCCCGACGGC
ATCATCGACC AAATCATCTG 801 GCGCGCGCCC GTATCGCGCC TCTTGATGAA
CAGTCCCGCA ATCAGCATCG 851 TCAAATGGGC GCAGGCGCAG TTTCCCGCCG
TTCTGCCCGG CGGCGTGGTG 901 GACAGCAAAC CGCTGATGAA GCCTTATGCC
CCCAAAATTC AAACCCGTTA 951 TCAGGCGATG AAGGACGAGT TGCTCAAAGA
AGCCGAAACG CGGCAGTCGG 1001 AACGGGGCAG GGCGGAAAAC GGTTCTTTGA
ACTAG
This corresponds to the amino acid sequence <SEQ ID 2046; ORF
639-1.ng>:
TABLE-US-02435 g639-1.pep 1 MSLPAMDAGI YLEKAAPRAL VEHNNIFDNS
FGVYLHGSAD AMVRENKIVG 51 DATLRVNERG NGVTVWNAPG AQVVGNDISK
GRDGIFSNTS THNTYKNNRF 101 SDLRFAVHYM YTNDSEVSGN ISVGNNMGYV
LMFSERLKVF DNIAVGSRD* 151 GIMLNYVNYS DIHDNIINKA GKCVFAYNAN
YDKLSANHFE NCQIGMHFTA 201 AIEGTSLHDN SFINNGSQVK YVSTRFLDWS
EGGHGNYWSD NSPFDLNGDG 251 FGDSAYRPDG IIDQIIWRAP VSRLLMNSPA
ISIVKWAQAQ FPAVLPGGVV 301 DSKPLMKPYA PKIQTRYQAM KDELLKEAET
RQSERGRAEN GSLN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2047>:
TABLE-US-02436 m639-1.seq 1 ATGAGCCTGC CCGCAATGGA TGCCGGTATT
TATCTCGAAG AAACTGCCCC 51 GCGCGCCCTG ATTGAACACA ACAATATTTT
GGATAATTCG GTCGGCGTAT 101 ATCTGCATGG TTCTGCCGAT GCGATGGTGC
GCGAGAATAA AATCGTCGGC 151 GACGCGACTT TGCGCGTGAA CGAGCGCGGC
AACGGCGTTA CCGTTTGGAA 201 CGCACCCGGT GCGCAGGTCG TCGGCAACGA
CATTTCCAAA GGGCGGGACG 251 GCATTTTTTC CAATACCAGC ACGCACAACA
CCTACAAAAA CAACCGCTTC 301 AGCGATTTGC GTTTCGCCGT CCACTATATG
TACACCAACG ACAGCGAAAT 351 CAGCGGCAAT ATTTCCGTGG GCAACAATAT
GGGCTATGTG CTGATGTTTT 401 CCGAGCGGCT CAAAGTATTC GACAATATCG
CCGTCGGCAG CCGCGATCAG 451 GGCATTATGC TCAACTATGT CAACTATTCC
GATATTCACG ACAACATTAT 501 CAACAAGGCA GGCAAGTGCG TATTTGCCTA
TAATGCCAAC TACGATAAAC 551 TTTTCGCCAA TCATTTTGAA AACTGTCAAA
TCGGCATACA CTTTACCGCC 601 GCCATCGAAG GCACGTCCTT GCATGACAAT
TCCTTTATCA ACAACGAAAG 651 CCAGGTCAAA TACGTCAGCA CGCGCTTTCT
CGATTGGAGC GAGGGCGGAC 701 ACGGCAACTA TTGGAGCGAC AACAGCGCGT
TCGATTTGAA CGGCGACGGC 751 TTCGGAGACA GCGCGTACCG CCCCAACGGC
ATCATCGACC AAATCATCTG 801 GCGCGCGCCC GTATCGCGCC TTTTGATGAA
CAGTCCCGCA ATCAGCATCG 851 TCAAATGGGC GCAGGCGCAG TTTCCCGCCG
TTCTGCCTGG CGGCGTGGTG 901 GACAGCAAAC CGCTGATGAA GCCTTATGCC
CCCAAAATTC AAACCCGTTA 951 TCAGGCGATG AAGGACGAGC TACTCAAAGA
AGTCGAAACG CGGCAGTCGG 1001 AATGGGGCAG GGCGGAAAAC GGTTCTTTGA
ACTAG
This corresponds to the amino acid sequence <SEQ ID 2048; ORF
639-1>:
TABLE-US-02437 m639-1.pep 1 MSLPAMDAGI YLEETAPRAL IEHNNILDNS
VGVYLHGSAD AMVRENKIVG 51 DATLRVNERG NGVTVWNAPG AQVVGNDISK
GRDGIFSNTS THNTYKNNRF 101 SDLRFAVHYM YTNDSEISGN ISVGNNMGYV
LMFSERLKVF DNIAVGSRDQ 151 GIMLNYVNYS DIHDNIINKA GKCVFAYNAN
YDKLFANHFE NCQIGIHFTA 201 AIEGTSLHDN SFINNESQVK YVSTRFLDWS
EGGHGNYWSD NSAFDLNGDG 251 FGDSAYRPNG IIDQIIWRAP VSRLLMNSPA
ISIVKWAQAQ FPAVLPGGVV 301 DSKPLMKPYA PKIQTRYQAM KDELLKEVET
RQSEWGRAEN GSLN* g639-1/m639-1 95.9% identity in 344 aa overlap 10
20 30 40 50 60 g639-1.pep
MSLPAMDAGIYLEKAAPRALVEHNNIFDNSFGVYLHGSADAMVRENKIVGDATLRVNERG
|||||||||||||::|||||:|||||:||| ||||||||||||||||||||||||||||| m639-1
MSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENKIVGDATLRVNERG 10 20
30 40 50 60 70 80 90 100 110 120 g639-1.pep
NGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRFAVHYMYTNDSEVSGN
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| m639-1
NGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRFAVHYMYTNDSEISGN 70 80
90 100 110 120 130 140 150 160 170 180 g639-1.pep
ISVGNNMGYVLMFSERLKVFDNIAVGSRDXGIMLNYVNYSDIHDNIINKAGKCVFAYNAN
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| m639-1
ISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIHDNIINKAGKCVFAYNAN 130
140 150 160 170 180 190 200 210 220 230 240 g639-1.pep
YDKLSANHFENCQIGMHFLAAIEGTSLHDNSFINNGSQVKYVSTRFLDWSEGGHGNYWSD ||||
||||||||||:||||||||||||||||||| |||||||||||||||||||||||| m639-1
YDKLFANHFENCQIGIHFLAAIEGTSLHDNSFINNESQVKYVSTRFLDWSEGGHGNYWSD 190
200 210 220 230 240 250 260 270 280 290 300 g639-1.pep
NSPFDLNGDGFGDSAYRPDGIIDQIIWRAPVSRLLMNSPAISIVKWAQAQFPAVLPGGVV ||
|||||||||||||||:||||||||||||||||||||||||||||||||||||||||| m639-1
NSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSPAISIVKWAQAQFPAVLPGGVV 250
260 270 280 290 300 310 320 330 340 g639-1.pep
DSKPLMKPYAPKIQTRYQAMKDELLKEAETRQSERGRAENGSLNX
|||||||||||||||||||||||||||:|||||| |||||||||| m639-1
DSKPLMKPYAPKIQTRYQAMKDELLKEVETRQSEWGRAENGSLNX 310 320 330 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2049>:
TABLE-US-02438 a639-1.seq 1 ATGAGCCTGC CCGCAATGGA TGCCGGTATT
TATCTCGAAG AAACTGCCCC 51 GCGCGCCCTG ATTGAACACA ATAATATTTT
GGATAATTCG GTCGGCGTCT 101 ATCTGCATGG TTCTGCCGAT GCGATGGTGC
GGGAGAATAA AATCGTCGGC 151 GACGCGACTT TGCGCGTGAA CGAGCGCGGC
AATGGCGTTA CCGTTTGGAA 201 CGCGCCCGGC GCGCAGGTCG TCGGCAACGA
TATTTCCAAA GGGCGGGACG 251 GCATTTTTTC CAATACCAGC ACGCACAACA
CCTATAAAAA CAACCGCTTC 301 AGCGATTTGC GTTTCGCCGT CCACTATATG
TACACCAACG ACAGCGAAAT 351 CAGCGGCAAT ATTTCCGTGG GCAACAATAT
GGGCTATGTG CTGATGTTTT 401 CCGAGCGGCT CAAAGTGTTT GACAATATCG
CCGTCGGCAG CCGCGACCAA 451 GGCATCATGC TCAACTATGT CAACTATTCC
GATATTCACG ACAACATTAT 501 CAACAAAGCG GGCAAGTGCG TTTTTGCCTA
CAATGCCAAC TACGATAAAC 551 TGTCCGCCAA TCATTTTGAA AACTGCCAAA
TCGGCATACA CTTTACCGCC 601 GCCATCGAAG GCACGTCCCT GCACGACAAT
TCCTTTATCA ACAACGAAAG 651 CCAGGTCAAA TACGTCAGCA CGCGCTTTCT
CGACTGGAGC GAGGGCGGAC 701 ACGGCAACTA TTGGAGCGAC AACAGCGCGT
TCGATTTGAA CGGCGACGGC 751 TTCGGAGACA GCGCGTACCG TCCCAACGGC
ATCATCGACC AAATCATCTG 801 GCGCGCACCC GTATCGCGCC TCTTGATGAA
CAGTCCCGCA ATCAGCATCG 851 TCAAATGGGC GCAGGCGCAA TTTCCCGCCG
TTTTGCCTGG CGGCGTGGTG 901 GACAGCAAAC CGCTGATGAA GCCTTATGCC
CCCAAAATTC AAACCCGTTA 951 TCAGGCGATG AAGGACGGGC TGCTCAAAAA
AGTCGAAACG CGGCAGTTGG 1001 AATGGGGCAG GGCGGAAAAC GGTTCTTTGA
ACTAG
This corresponds to the amino acid sequence <SEQ ID 2050; ORF
639-1.a>:
TABLE-US-02439 a639-1.pep 1 MSLPAMDAGI YLEETAPRAL IEHNNILDNS
VGVYLHGSAD AMVRENKIVG 51 DATLRVNERG NGVTVWNAPG AQVVGNDISK
GRDGIFSNTS THNTYKNNRF 101 SDLRFAVHYM YTNDSEISGN ISVGNNMGYV
LMFSERLKVF DNIAVGSRDQ 151 GIMLNYVNYS DIHDNIINKA GKCVFAYNAN
YDKLSANHFE NCQIGIHFTA 201 AIEGTSLHDN SFINNESQVK YVSTRFLDWS
EGGHGNYWSD NSAFDLNGDG 251 FGDSAYRPNG IIDQIIWRAP VSRLLMNSPA
ISIVKWAQAQ FPAVLPGGVV 301 DSKPLMKPYA PKIQTRYQAM KDGLLKKVET
RQLEWGRAEN GSLN* a639-1/m639-1 98.8% identity in 344 aa overlap 10
20 30 40 50 60 a639-1.pep
MSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENKIVGDATLRVNERG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m639-1
MSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENKIVGDATLRVNERG 10 20
30 40 50 60 70 80 90 100 110 120 a639-1.pep
NGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRFAVHYMYTNDSEISGN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m639-1
NGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRFAVHYMYTNDSEISGN 70 80
90 100 110 120 130 140 150 160 170 180 a639-1.pep
ISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIHDNIINKAGKCVFAYNAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m639-1
ISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIHDNIINKAGKCVFAYNAN 130
140 150 160 170 180 190 200 210 220 230 240 a639-1.pep
YDKLSANHFENCQIGIHFLAAIEGTSLHDNSFINNESQVKYVSTRFLDWSEGGHGNYWSD ||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||| m639-1
YDKLFANHFENCQIGIHFLAAIEGTSLHDNSFINNESQVKYVSTRFLDWSEGGHGNYWSD 190
200 210 220 230 240 250 260 270 280 290 300 a639-1.pep
NSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSPAISIVKWAQAQFPAVLPGGVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m639-1
NSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSPAISIVKWAQAQFPAVLPGGVV 250
260 270 280 290 300 310 320 330 340 a639-1.pep
DSKPLMKPYAPKIQTRYQAMKDGLLKKVETRQLEWGRAENGSLNX
|||||||||||||||||||||| |||:||||| |||||||||||| m639-1
DSKPLMKPYAPKIQTRYQAMKDELLKEVETRQSEWGRAENGSLNX 310 320 330 340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2051>:
TABLE-US-02440 g640.seq 1 ATGATTCATA TAATATCAAT ATTAAAGAGT
ATCGGTATAT CGGGGATAGC 51 TATGTCCTGT TTTTCAATCC GGCGTATGTC
TGCGTTTCGG GCGCGGATAA 101 CGGCGTTTTT TACCGCCTTT GTCTTTTTGA
CGGcggcACT GCCCGCTTAT 151 GcggAgcgTc tgcctGATTT TCTGgcgAAA
ATacAgcctT CGGAAATTTT 201 TCCGGGTGCG GATCGTTACG GCAAGCCGGA
aggcAAGCCT AtggtTGCCC 251 GCgtttACAA AGgcgATGAG CAGCTCGGTT
TGGTTTATAT CACGACCGAT 301 GCGGTCAATA CGCGCGGTTA TTCGAGCAAA
CCGATCGATA CGCTGATGGC 351 TTTGGCAAAC GACGGCACGA TAGCCGGGGC
GAAACTGGTC GATCATCACG 401 AACCGATTAT GCTGATCGGT ATCCCGCAAT
CGCGTGTCGA TAAGTTCATC 451 GACAAATATA TCGGTCTGAA TTTTATTAAA
AATCCGCCGA CCCCGAGCGT 501 GGCGCCGGGC GACATCATCA GcggtGCGAC
TgttaCACTG ATGGTGGTTA 551 ACGACAGCAT CCAGCGTTCG TACAAGGTCA
TTGCCAACCA ATACCGTCTG 601 GGTTCGGACA AGGCCCTTCA GACGGCATCC
GCTTCCGATG TTCGGGAAGC 651 CGCGCCTGCG TCAGAAACCC GTCCGCGCCG
TATGGCAAAT CCCGACAAGC 701 AGGATATTTT GTCTTGGGAC GAACTTTTGA
AACAAAAGGC CGTCGGCCAT 751 CTGCATATCA CGCTCGATCA AATCAACAAA
CTGTTTGAGA AAGGCGGCAA 801 GGCCGGCGTG GCCGATCACG CCGAACAGGG
CGATCCTGAC GATACCTTTA 851 TTGATTTGTA TGTTGCCTTG GTCAGCCAGC
CTTCCATCGG TAAAAGCCTG 901 CTGGGTGAGG ACGGCTGGGC GCATCTGCAA
AAACGGCTGA AACCCGGGCA 951 GCAGGCGGTT TTGGTTGCCG GAGAGGGCCG
TTATTCTTGG AAAGGTTCGG 1001 GCTATGTGCG CGGCGGTATT TTCGACCGTA
TCGAGATGAT TCAGGGGGAG 1051 AACAGCTTCC GTTTTACCGA TGCCCAACAC
GAACGCGTCG TCGAGCTGTC 1101 TGCCGCCGAT GCGCCGCGTT TTAAAGAAGT
TTCTTGGTTT ACCATCCCTG 1151 AAGGCGTAGC GTTTGACGGT GCGGAGCCGT
GGCGGCTGTA A
This corresponds to the amino acid sequence <SEQ ID 2052; ORF
640.ng>:
TABLE-US-02441 g640.pep 1 MIHIISILKS IGISGIAMSC FSIRRMSAFR
ARITAFFTAF VFLTAALPAY 51 AERLPDFLAK IQPSEIFPGA DRYGKPEGKP
MVARVYKGDE QLGLVYITTD 101 AVNTRGYSSK PIDTLMALAN DGTIAGAKLV
DHHEPIMLIG IPQSRVDKFI 151 DKYIGLNFIK NPPTPSVAPG DIISGATVTL
MVVNDSIQRS YKVIANQYRL 201 GSDKALQTAS ASDVREAAPA SETRPRRMAN
PDKQDILSWD ELLKQKAVGH 251 LHITLDQINK LFEKGGKAGV ADHAEQGDPD
DTFIDLYVAL VSQPSIGKSL 301 LGEDGWAHLQ KRLKPGQQAV LVAGEGRYSW
KGSGYVRGGI FDRIEMIQGE 351 NSFRFTDAQH ERVVELSAAD APRFKEVSWF
TIPEGVAFDG AEPWRL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2053>:
TABLE-US-02442 m640.seq (partial) 1 ATGATTCATA TAATATCAAT
ATTAAAGAGT ATCGGTATAT CGGGGATAGT 51 CATGTCCTGT TTTTCAATCA
AACGTATGTC CGCGTTTCGG GCGCGGATAA 101 CGGCGTTTTT TGCCGCCTTT
GTCTTTTTGA CGGCGGCACT GCCCGCTTAT 151 GCGGAGCGTC TGCCTGATTT
TCTGGCGAAA ATACAGCCTT CGGAAATTTT 201 TCCGGGTGCG GACCGTTACG
GCAAGCCGGA AGGTAAGCCT ATGGTTGCCC 251 GCGTTTACAA AGGCGATGAG
CAGTTGGGCT TGGTCTATAT CACGACCGAT 301 GCGGTCAATA CGCGCGGTTA
TTCGAGCAAA CCGATTGATA CGCTGATGGT 351 GTTGGCAAAC GACGGCACGA
TAGCCGGGGC GAAACTGGTC GACCATCACG 401 AACCGATTAT GCTGATCGGT
ATCCCGCAT...
This corresponds to the amino acid sequence <SEQ ID 2054; ORF
640>:
TABLE-US-02443 m640.pep (partial) 1 MIHIISILKS IGISGIVMSC
FSIKRMSAFR ARITAFFAAF VFLTAALPAY 51 AERLPDFLAK IQPSEIFPGA
DRYGKPEGKP MVARVYKGDE QLGLVYITTD 101 AVNTRGYSSK PIDTLMVLAN
DGTIAGAKLV DHHEPIMLIG IPH... m640/g640 96.5% identity in 143 aa
overlap 10 20 30 40 50 60 m640.pep
MIHIISILKSIGISGIVMSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAK
||||||||||||||||:||||||:|||||||||||||:|||||||||||||||||||||| g640
MIHIISILKSIGISGIAMSCFSIRRMSAFRARITAFFTAFVFLTAALPAYAERLPDFLAK 10 20
30 40 50 60 70 80 90 100 110 120 m640.pep
IQPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMVLAN
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| g640
IQPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMALAN 70 80
90 100 110 120 130 140 m640.pep DGTIAGAKLVDHHEPIMLIGIPH
||||||||||||||||||||||: g640
DGTIAGAKLVDHHEPIMLIGIPQSRVDKFIDKYIGLNFIKNPPTPSVAPGDIISGATVTL 130
140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2055>:
TABLE-US-02444 a640.seq (partial) 1 ATGATTCATA TAATATCAAT
ATTAAAGAGT ATCGGTATAT CGGGGATAGT 51 CATGTCCTGT TTTTCAATCA
AACGTATGTC CGCGTTTCGG GCGCGGATAA 101 CGGCGTTTTT TGCCGCCTTT
GTCTTTTTGA CGGCGGCACT GCCCGCTTAT 151 GCGGAGCGTC TGCCTGATTT
TCTGGCGAAA ATACAGCCTT CGGAAATTGT 201 TCCGGGTGCG GACCGTTACA
GCAAGCCGGA AGGTAAGCCT ATGGTTGCCC 251 GCGTTTACAA AGGCGATGAG
CAGTTGGGCT TGGTCTATAT CACGACCGAT 301 GCGGTCAATA CGCGCGGTTA
TTCGAGCAAA CCGATTGATA CGCTGATGGC 351 GTTGGCTAAA GACGGTACGA
TAGCCGGAGC GAAATTGGTT GATCACCATG 401 AGTCGATTAT GCTGATCGGT
ATCCCGCAT...
This corresponds to the amino acid sequence <SEQ ID 2056; ORF
640.a>:
TABLE-US-02445 a640.pep (partial) Length: 143 1 MIHIISILKS
IGISGIVMSC FSIKRMSAFR ARITAFFAAF VFLTAALPAY 51 AERLPDFLAK
IQPSEIVPGA DRYSKPEGKP MVARVYKGDE QLGLVYITTD 101 AVNTRGYSSK
PIDTLMALAK DGTIAGAKLV DHHESIMLIG IPH... m640/a640 96.5% identity in
143 aa overlap 10 20 30 40 50 60 m640.pep
MIHIISILKSIGISGIVMSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a640
MIHIISILKSIGISGIVMSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAK 10 20
30 40 50 60 70 80 90 100 110 120 m640.pep
IQPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMVLAN ||||||
||||||:||||||||||||||||||||||||||||||||||||||||||:||: a640
IQPSEIVPGADRYSKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMALAK 70 80
90 100 110 120 130 140 m640.pep DGTIAGAKLVDHHEPIMLIGIPH
|||||||||||||| |||||||| a640 DGTIAGAKLVDHHESIMLIGIPH 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2057>:
TABLE-US-02446 g642.seq 1 ATGCGGTATC CGCCGCAATC GGCGGTTTTG
CAGAATGCCG CGCGTTGCCT 51 TTTGCGCCGC CCGAAATCTG CCTGCCGCCG
TATTTGCCCG CTATCCGCAA 101 TATCGGCAGT CCAATATATC TTTGCGGATG
TCGTTCAGCA GGAAGGCTGT 151 GGTGTCTTCG TGTTCCTCCT GTACGAAGAC
AAAAAGTCGG GCGATGATTT 201 TGCCGATGAA GACTTTTTGC AGGGCGCAGG
CGTCGGTCAG GGTGTGTTCC 251 TGCAGGAAGC TGCGGATGTC TTCGGGCAAA
GCGTAgtCgc gGGCAACGGC 301 GGcaaagcgG ACatcggtTT Gcacggcgtc
gagCAGGGtt tggtTTTTGT 351 CCAACTTAAT GCCTGCTTCT TTTTCTTCGG
CGGTGGCGCG GACGAACTGG 401 TCGTAAATTT CGGCATAAAG CATATCGTTC
GGGCCTTCAA AAATCGTGAA 451 GGGGCGGATA TCGATGGCGA TATTGCCGGC
TGGGTGTCCG CGTTCAAAAC 501 CCTTCGCGCC CAAGAGTTTT TGCAACATTT
GCGCGGCGgc gTAAGTGTAT 551 TCCGTGGCGa ggGTTTTGAc gatgTTCGCC
TCCATCAATT GATGGGCGAc 601 ggGCGcgacg ggCGAAACGG AATGGCAGAC
GTAGCGGTAA AGGATTTCGG 651 AAACCTGATG GCGGCGTTGG ATTTCGCGGC
GTTCGTAATC GACGAATCTG 701 ATATCGTTGC GGACATATCG GTTCAGGTTG
TCAAGGATGT ATTCCATAAT 751 GCCGTGCGTC ATGCCGATCA GTTGCAGGCG
GCTGCGGATA AAGATGTTTT 801 GGAACGCGCG CAAACCGGCA GCGTCGCCCC
GGGAGAGTTT CATCACGGCG 851 GTTGCAGGCA TTTCGGCATC GATGCGGTTG
ACGGCGTAAC GGACGGCGCG 901 CAGGCCTTCG GATGCGAGGG TTTCGCAGCG
GATGTATGTT TTGGGGACGA 951 GCAGCAGGTC GATGactttg gcgagtttgC
Cgtttttgcg ctctttggcg 1001 gcaacgaggA GGAAGTCGCT TTGCGAATTG
CCCTGCCAGT ATTTCGCGGC 1051 GttgACGTAA ATGGTTtgtt cgtcggtata
ttcgtagcag gactgcaTTT 1101 CGCGTGCAAt cgCcgcgccg gaggtTtcgg
gttcggtaAc gcccaaacgg 1151 cggctttcgc ctTTGAAAAT CATGTCCAAA
CCTTGTGCGA CTTGCgcttc 1201 gccgccgaac tCTTGCAGAG GCTGCAACAC
CAGCGCGCCT TCGATGCCGG 1251 TACGCAGCGT AACGGGCACG CCGTAATGCC
CCGCAATCCT TAG
This corresponds to the amino acid sequence <SEQ ID 2058; ORF
642.ng>:
TABLE-US-02447 g642.pep 1 MRYPPQSAVL QNAARCLLRR PKSACRRICP
LSAISAVQYI FADVVQQEGC 51 GVFVFLLYED KKSGDDFADE DFLQGAGVGQ
GVFLQEAADV FGQSVVAGNG 101 GKADIGLHGV EQGLVFVQLN ACFFFFGGGA
DELVVNFGIK HIVRAFKNRE 151 GADIDGDIAG WVSAFKTLRA QEFLQHLRGG
VSVFRGEGFD DVRLHQLMGD 201 GRDGRNGMAD VAVKDFGNLM AALDFAAFVI
DESDIVADIS VQVVKDVFHN 251 AVRHADQLQA AADKDVLERA QTGSVAPGEF
HHGGCRHFGI DAVDGVTDGA 301 QAFGCEGFAA DVCFGDEQQV DDFGEFAVFA
LFGGNEEEVA LRIALPVFRG 351 VDVNGLFVGI FVAGLHFACN RRAGGFGFGN
AQTAAFAFEN HVQTLCDLRF 401 AAELLQRLQH QRAFDAGTQR NGHAVMPRNP *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2059>:
TABLE-US-02448 m642.seq (partial) 1 GCCTGCCGCC GTATTTGCCC
GCTACCCGCA ATATCGGCAG TCCAATATAT 51 CTTTGCGGAT GTCGTTCAGC
AGGAAGGCTG CGGTGTCTTC GTGTTTCGCC 101 TGTACGAAGA CAAAGAGTCG
GGCGATGATT TTGCCGATAA AGACTTTTTG 151 CAGGGCGCAG GCATCGGTCA
GGGTGTGTTC CTGCAGGAAG CTGCGGATGT 201 CTTCAGGCAA AGTGTAGTCG
CGGGCGACGG CGGCAAAGCG GGCATCGGTT 251 TGCAGGCGGT CGAGCAGGGT
TTGGTTTTTG TCCAACTTCA TGCCTGCTTC 301 TTTTTCTTCG GCGGTGGCGC
GGACAAACTG GTCGTAAATT TCGGCATAAA 351 GCATATCGTT CGGGCCTTCA
AAAATCGTGA AGGGGCGGAT GTCGATAGCG 401 ATATTGCCGG CGGTGTGTCC
GCGTTCAAAA CCCTTCGCAC CCAAGAGTTT 451 TTGCAACATT TGCGCGGCGG
CGTAAGTGTA TTCCGTGGCG AGGGTTTTGA 501 CGATGTTCGC CTCCATCAGC
TGATGGGCGA CGGGGGCAAC AGGCGAAACG 551 GAATGGCAGA CGTAGCGGTA
AAGAATCTCG GAAACCTGAT GGCGGCGCCG 601 GATTTCGCGG CGTTCGTAAT
CGACGAATTT GATGTCGTTG CGGACGTATC 651 GTTCCAGATT TTCAAGGATG
TATTCCATAA TGCCGTGCGT CATGCCGATC 701 AGTTGCAGGC GGCTGCGGAT
AAAGATGTTT TGGAACGCGC GCAAACCGGC 751 AGCGTCGCTC TGGGAGAGTT
TCATCACGGC GGTTGCAGGC ATTTCGGCAT 801 CGATGCGGTT GACGGCGTAA
CGGACGGCGC GCAAGCCTTC GGATGCGAGG 851 GTTTCGCAGC GGATGTATGT
TTTGGGGACG AGCAGCAGGT CGATGACTTT 901 GGCGAGTTTG CCGTTTTTGC
GCTCTTTGGC GGCAACGAGG AGGAAGTCGC 951 TTTGCGAGTT GCCCTGCCAG
TATTTCGCGG CGTTGACGTA AATGGTTTGT 1001 CCGTCGATAT ATTCGTAGTA
GGACTGCATT TCGCGTGCAA TCGCCGCGCC 1051 GGAGGTTTCG GGTTCGGTAA
CACCCAAACC GCCGCCCTCG CCTTTGAAAA 1101 TCATCTCCAA ACCTTGCGCG
ACTTGCGCTT CATCGCCGAA CTCTTGCAGT 1151 GGCTGCAACA CCAGCGCGCC
TTCGATGCCG GTACGCAGCG TAACGGGCAC 1201 GCCGTAATGC CCCGCAATCC G
This corresponds to the amino acid sequence <SEQ ID 2060; ORF
642>:
TABLE-US-02449 m642.pep (partial) 1 ACRRICPLPA ISAVQYIFAD
VVQQEGCGVF VFRLYEDKES GDDFADKDFL 51 QGAGIGQGVF LQEAADVFRQ
SVVAGDGGKA GIGLQAVEQG LVFVQLHACF 101 FFFGGGADKL VVNFGIKHIV
RAFKNREGAD VDSDIAGGVS AFKTLRTQEF 151 LQHLRGGVSV FRGEGFDDVR
LHQLMGDGGN RRNGMADVAV KNLGNLMAAP 201 DFAAFVIDEF DVVADVSFQI
FKDVFHNAVR HADQLQAAAD KDVLERAQTG 251 SVALGEFHHG GCRHFGIDAV
DGVTDGAQAF GCEGFAADVC FGDEQQVDDF 301 GEFAVFALFG GNEEEVALRV
ALPVFRGVDV NGLSVDIFVV GLHFACNRRA 351 GGFGFGNTQT AALAFENHLQ
TLRDLRFIAE LLQWLQHQRA FDAGTQRNGH 401 AVMPRNP m642/g642 90.4%
identity in 407 aa overlap 10 20 30 m642.pep
ACRRICPLPAISAVQYIFADVVQQEGCGVFVFRLYED ||||||||
||||||||||||||||||||||| |||| g642
MRYPPQSAVLQNAARCLLRRPKSACRRICPLSAISAVQYIFADVVQQEGCGVFVFLLYED 10 20
30 40 50 60 40 50 60 70 80 90 m642.pep
KESGDDFADKDFLQGAGIGQGVFLQEAADVFRQSVVAGDGGKAGIGLQAVEQGLVFVQLH
|:|||||||:|||||||:||||||||||||| ||||||:|||| |||::||||||||||: g642
KKSGDDFADEDFLQGAGVGQGVFLQEAADVFGQSVVAGNGGKADIGLHGVEQGLVFVQLN 70 80
90 100 110 120 100 110 120 130 140 150 m642.pep
ACFFFFGGGADKLVVNFGIKHIVRAFKNREGADVDSDIAGGVSAFKTLRTQEFLQHLRGG
|||||||||||:|||||||||||||||||||||:|:|||| ||||||||:|||||||||| g642
ACFFFFGGGADELVVNFGIKHIVRAFKNREGADIDGDIAGWVSAFKTLRAQEFLQHLRGG 130
140 150 160 170 180 160 170 180 190 200 210 m642.pep
VSVFRGEGFDDVRLHQLMGDGGNRRNGMADVAVKNLGNLMAAPDFAAFVIDEFDVVADVS
||||||||||||||||||||| : ||||||||||::|||||| ||||||||| |:|||:| g642
VSVFRGEGFDDVRLHQLMGDGRDGRNGMADVAVKDFGNLMAALDFAAFVIDESDIVADIS 190
200 210 220 230 240 220 230 240 250 260 270 m642.pep
FQIFKDVFHNAVRHADQLQAAADKDVLERAQTGSVALGEFHHGGCRHFGIDAVDGVTDGA |:
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| g642
VQVVKDVFHNAVRHADQLQAAADKDVLERAQTGSVAPGEFHHGGCRHFGIDAVDGVTDGA 250
260 270 280 290 300 280 290 300 310 320 330 m642.pep
QAFGCEGFAADVCFGDEQQVDDFGEFAVFALFGGNEEEVALRVALPVFRGVDVNGLSVDI
||||||||||||||||||||||||||||||||||||||||||:||||||||||||| | | g642
QAFGCEGFAADVCFGDEQQVDDFGEFAVFALFGGNEEEVALRIALPVFRGVDVNGLFVGI 310
320 330 340 350 360 340 350 360 370 380 390 m642.pep
FVVGLHFACNRRAGGFGFGNTQTAALAFENHLQTLRDLRFIAELLQWLQHQRAFDAGTQR
||:|||||||||||||||||:||||:|||||:||| |||| ||||| ||||||||||||| g642
FVAGLHFACNRRAGGFGFGNAQTAAFAFENHVQTLCDLRFAAELLQRLQHQRAFDAGTQR 370
380 390 400 410 420 400 m642.pep NGHAVMPRNP |||||||||| g642
NGHAVMPRNPX 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2061>:
TABLE-US-02450 a642.seq (partial) 1 GCCTGCCGCC GTATTTGCCC
GCTATCCGCA ATATCGGCAG TCCAATATGT 51 CTTTGCGGAT GTCGTTCAGC
AGGAAGGCTG CGGTGTCTTC GTGTTCCGCC 101 TGTACGAAGA CAAAGAGTCG
GGCGATGATT TTGCCGATAA AGACTTTTTG 151 CAGGGCGCAG GCATCGGTCA
GGGTGTGTTC CTGCAGGAAG CTGCGGATGT 201 CTTCGGGCAA AGTGTAGTCG
CGGGCGACGG CGGCAAAGCG GGCATCGGTT 251 TGCAGGCGGT CGAGCAGGGT
TTGGTTTTTG TCCAACTTCA TGCCTGCTTC 301 TTTTTCTTCG GCGGTGGCGC
GGACAAACTG GTCGTAAATT TCGGCATAAA 351 GCATATCGTT CGGGCCTTCA
AAAATCGTGA AGGGGCGGAT GTCGATAGCG 401 ATATTGCCGG CGGTGTGTCC
GCGTTCAAAA CCCTTCGCGC CCAAGAGTTT 451 TTGCAACATT TGCGCGGCGG
CGTAAGTGTA TTCCGTGGCG AGGGTTTTGA 501 CGATGTTCGC CTCCATCAGT
TGATGGGCGA CGGGTGCAAC GGGCGAAACG 551 GAATGGCAGA CGTAGCGGTA
AAGAATCTCG GAAACCTGAT GGCGGCGCCG 601 GATTTCGCGG CGTTCGTAAT
CGACGAATCT GATGTCGTTG CGGACGTATC 651 GTTCCAGGTT TTCAAGGGTG
TATTCCATAA TGCCGTGCGT CATGCCGATC 701 AGTTGCAGGC GGCTGCGGAT
AAAGATGTTT TGGAACGCGC GCAAACCGGC 751 AGCGTCGCTC TGGGAGAGTT
TCATCACGGC GGTTGCAGGC ATTTCGGCAT 801 CGATGCGGTT GACGGCGTAA
CGGACGGCGC GCAAGCCTTC GGATGCGAGG 851 GTTTCGCAGC GGATGTATGT
TTTGGGGACG AGCAGCAGGT CGATGACTTT 901 GGCGAGTTTG CCGTTTTTGC
GCTCTTTGGC GGCAACGAGG AGGAAGTCGC 951 TTTGCGAGTT GCCCTGCCAG
TATTTCGCGG CGTTGACGTA AATGGTTTGT 1001 CCGTCGGTAT ATTCGTAGTA
AGACTGCATT TCTCGGGCAA TCGCCGCGCC 1051 GGAGGTTTCG GGTTCGGTAA
CGCCTAAACC GCCGCCCTCG CCTTTGAAAA 1101 CCATGTCCAA ACCCTGTGCG
ATTTGCGCTT CATCGCCGAA CTCTTGCAGT 1151 GGCTGCAACA CCAGCGCGCC
TTCGATGCCG GTACGCAGCG TAACGGGCAC 1201 GCCGTAATGC CCCGCAATCC G
This corresponds to the amino acid sequence <SEQ ID 2062; ORF
642.a>:
TABLE-US-02451 a642.pep Length: 407 1 ACRRICPLSA ISAVQYVFAD
VVQQEGCGVF VFRLYEDKES GDDFADKDFL 51 QGAGIGQGVF LQEAADVFGQ
SVVAGDGGKA GIGLQAVEQG LVFVQLHACF 101 FFFGGGADKL VVNFGIKHIV
RAFKNREGAD VDSDIAGGVS AFKTLRAQEF 151 LQHLRGGVSV FRGEGFDDVR
LHQLMGDGCN GRNGMADVAV KNLGNLMAAP 201 DFAAFVIDES DVVADVSFQV
FKGVFHNAVR HADQLQAAAD KDVLERAQTG 251 SVALGEFHHG GCRHFGIDAV
DGVTDGAQAF GCEGFAADVC FGDEQQVDDF 301 GEFAVFALFG GNEEEVALRV
ALPVFRGVDV NGLSVGIFVV RLHFSGNRRA 351 GGFGFGNA*T AALAFENHVQ
TLCDLRFIAE LLQWLQHQRA FDAGTQRNGH 401 AVMPRNP m642/a642 95.8%
identity in 407 aa overlap 10 20 30 40 50 60 m642.pep
ACRRICPLPAISAVQYIFADVVQQEGCGVFVFRLYEDKESGDDFADKDFLQGAGIGQGVF
|||||||| |||||||:||||||||||||||||||||||||||||||||||||||||||| a642
ACRRICPLSAISAVQYVFADVVQQEGCGVFVFRLYEDKESGDDFADKDFLQGAGIGQGVF 10 20
30 40 50 60 70 80 90 100 110 120 m642.pep
LQEAADVFRQSVVAGDGGKAGIGLQAVEQGLVFVQLHACFFFFGGGADKLVVNFGIKHIV
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| a642
LQEAADVFGQSVVAGDGGKAGIGLQAVEQGLVFVQLHACFFFFGGGADKLVVNFGIKHIV 70 80
90 100 110 120 130 140 150 160 170 180 m642.pep
RAFKNREGADVDSDIAGGVSAFKTLRTQEFLQHLRGGVSVFRGEGFDDVRLHQLMGDGGN
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| | a642
RAFKNREGADVDSDIAGGVSAFKTLRAQEFLQHLRGGVSVFRGEGFDDVRLHQLMGDGCN 130
140 150 160 170 180 190 200 210 220 230 240 m642.pep
RRNGMADVAVKNLGNLMAAPDFAAFVIDEFDVVADVSFQIFKDVFHNAVRHADQLQAAAD
|||||||||||||||||||||||||||| |||||||||:|| ||||||||||||||||| a642
GRNGMADVAVKNLGNLMAAPDFAAFVIDESDVVADVSFQVFKGVFHNAVRHADQLQAAAD 190
200 210 220 230 240 250 260 270 280 290 300 m642.pep
KDVLERAQTGSVALGEFHHGGCRHFGIDAVDGVTDGAQAFGCEGFAADVCFGDEQQVDDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a642
KDVLERAQTGSVALGEFHHGGCRHFGIDAVDGVTDGAQAFGCEGFAADVCFGDEQQVDDF 250
260 270 280 290 300 310 320 330 340 350 360 m642.pep
GEFAVFALFGGNEEEVALRVALPVFRGVDVNGLSVDIFVVGLHFACNRRAGGFGFGNTQT
||||||||||||||||||||||||||||||||||| |||| |||: |||||||||||: | a642
GEFAVFALFGGNEEEVALRVALPVFRGVDVNGLSVGIFVVRLHFSGNRRAGGFGFGNAXT 310
320 330 340 350 360 370 380 390 400 m642.pep
AALAFENHLQTLRDLRFIAELLQWLQHQRAFDAGTQRNGHAVMPRNP ||||||||:|||
|||||||||||||||||||||||||||||||||| a642
AALAFENHVQTLCDLRFIAELLQWLQHQRAFDAGTQRNGHAVMPRNP 370 380 390 400
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2063>:
TABLE-US-02452 g643.seq 1 ATGGTGTTGC CTTTGATGTT GTTGGCGACA
ATCAGgTcgg CTACGCTGAc 51 gttgtancGt TTGGcaATGt tGaaCAgggt
gtcgccTTCT ACAACGCGGT 101 GGATGCTGGC ATGGagcGGG GAGGTTTCGG
CTTCGCCGTC GGCAGCTTTG 151 GCTACGCGCG TTTCCAAACG TGCCCGGCGT
TtgCCGTCGG CGGCAACGGT 201 ATGTTGCGGA GATGAGGAAA TGTTGTGTTC
GGCAACTGTG TCAGGCGTGC 251 CGATGACGGC GGagaTGGTT TCTTCAGCCT
GCCGGCGCag gTTGTTTCGG 301 GCAACAAGCT GCATGAGTTC GTCTGCCGCC
TGCATGTCGT TTGGGGGGAt 351 GACCTGCGCg aGTGtTGCGG TTTGGGTTTC
agacgGCATG GCAGTCTGTT 401 TTTcggTTTG a
This corresponds to the amino acid sequence <SEQ ID 2064; ORF
643>:
TABLE-US-02453 g643.pep 1 MVLPLMLLAT IRSATLTLXR LAMLNRVSPS
TTRWMLAWSG EVSASPSAAL 51 ATRVSKRARR LPSAATVCCG DEEMLCSATV
SGVPMTAEMV SSACRRRLFR 101 ATSCMSSSAA CMSFGGMTCA SVAVWVSDGM
AVCFSV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2065>:
TABLE-US-02454 m643.seq 1 ATGGTGTTGC CTTTGATGTT GTTGGCGACA
ATCAGGTCGG CTACACTGAC 51 GTTGTAGCGT TTGGCAATGT TGAACAGGGT
GTCGCCTTCT ACAACGCGGT 101 GGATGCTGGC ATGGAGCGGG GAGATTTCGG
CTTCGCCGTC GGCAGCTTTG 151 GCTACGCGCG TTTCCAAACG TACCCGGCGT
TTGCCGTCGG CGGCAGCGGT 201 ATGTTGCGGA GATGCGGAAA TTTTGTGTTC
GGCAACTGTG TCAGGCGTGC 251 CGATGACGGC GGAGATGGTT TCTTCAGCCT
GTCGGCGCAG GTTGTTTCGG 301 GCAACAAGCT GCATGAGTTC GTCTGCCGCC
TGCATGTCGT TTTGGGGGAT 351 GATCTGCGCG AGTGTTGCGG TTTGGGTTTC
AGACGGCATG GCGGTCTGTT 401 TTTCGGTTTG A
This corresponds to the amino acid sequence <SEQ ID 2066; ORF
643>:
TABLE-US-02455 m643.pep 1 MVLPLMLLAT IRSATLTL*R LAMLNRVSPS
TTRWMLAWSG EISASPSAAL 51 ATRVSKRTRR LPSAAAVCCG DAEILCSATV
SGVPMTAEMV SSACRRRLFR 101 ATSCMSSSAA CMSFWGMICA SVAVWVSDGM
AVCFSV*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 643 shows 94.9% identity over a 136 aa overlap with a
predicted ORF (ORF643.a) from N. gonorrhoeae:
TABLE-US-02456 m643/g643 10 20 30 40 50 60 m643.pep
MVLPLMLLATIRSATLTLXRLAMLNRVSPSTTRWMLAWSGEISASPSAALATRVSKRTRR
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||:|| g643
MVLPLMLLATIRSATLTLXRLAMLNRVSPSTTRWMLAWSGEVSASPSAALATRVSKRARR 10 20
30 40 50 60 70 80 90 100 110 120 m643.pep
LPSAAAVCCGDAEILCSATVSGVPMTAEMVSSACRRRLFRATSCMSSSAACMSFWGMICA
|||||:||||| |:|||||||||||||||||||||||||||||||||||||||| || || g643
LPSAATVCCGDEEMLCSATVSGVPMTAEMVSSACRRRLFRATSCMSSSAACMSFGGMTCA 70 80
90 100 110 120 130 m643.pep SVAVWVSDGMAVCFSVX |||||||||||||||||
g643 SVAVWVSDGMAVCFSVX 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2067>:
TABLE-US-02457 a643.seq 1 ATGGTGTTGC CTTTGATGTT GTTGGCGACA
ATCAGGTCGG CTACACTGAC 51 GTTGTAGCGT TTGGCAATGT TGAACAGGGT
GTCGCCTTCT ACAACGCGGT 101 GGATGCTGGC ATGGAGCGGG GAGATTTCGG
CTTCGCCGTC GGCAGCTTTG 151 GCTACGCGCG TTTCCAAACG TACCCGGCGT
TTGCCGTCGG CGGCAACGGT 201 ATGTTGCGGA GATGAGGAAA TGTTGTGTTC
GGCAACTGTG TCAGGCGTGC 251 CGATGACGGC AGAGATGGTT TCTTCAGCCT
GTCGGCGCAG GTTGTTTCGG 301 GCAACAAGCT GCATGAGTTC GTCTGCCGCC
TGCATGTCGT TTTGGGGGAC 351 GATCTGCGCG AGTGTTGCGG TTTGGGTTTC
AGACGGCATG GCGGTCTGTT 401 TTTCGGTTTG A
This corresponds to the amino acid sequence <SEQ ID 2068; ORF
643.a>:
TABLE-US-02458 a643.pep 1 MVLPLMLLAT IRSATLTL*R LAMLNRVSPS
TTRWMLAWSG EISASPSAAL 51 ATRVSKRTRR LPSAATVCCG DEEMLCSATV
SGVPMTAEMV SSACRRRLFR 101 ATSCMSSSAA CMSFWGTICA SVAVWVSDGM AVCFSV*
m643/a643 97.1% identity in 136 aa overlap 10 20 30 40 50 60
m643.pep
MVLPLMLLATIRSATLTLXRLAMLNRVSPSTTRWMLAWSGEISASPSAALATRVSKRTRR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a643
MVLPLMLLATIRSATLTLXRLAMLNRVSPSTTRWMLAWSGEISASPSAALATRVSKRTRR 10 20
30 40 50 60 70 80 90 100 110 120 m643.pep
LPSAAAVCCGDAEILCSATVSGVPMTAEMVSSACRRRLFRATSCMSSSAACMSFWGMICA
|||||:||||| |:|||||||||||||||||||||||||||||||||||||||||| ||| a643
LPSAATVCCGDEEMLCSATVSGVPMTAEMVSSACRRRLFRATSCMSSSAACMSFWGTICA 70 80
90 100 110 120 130 m643.pep SVAVWVSDGMAVCFSVX |||||||||||||||||
a643 SVAVWVSDGMAVCFSVX 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2069>:
TABLE-US-02459 g644.seq 1 ATGCCGTCTG AAAGGccgGC GGATTGTTGC
CCGGTGCACT TTGTGGTAAA 51 GTTTAGAAAA TTAACTCTAA ACTGTGGCAG
GCGGTTTGAC CGGCCGCCGA 101 TTAATGGGAA CCGACAGAGG AAGCCGATGA
TACACACCGA ACCGAGCGCG 151 CAGCCGTCAA CCATGGACAC GGCTGCTTTT
TTAAagcaca tcgaatCCGC 201 ATTcCCCCGC ATTTTTTCAG ACGGCATCGA
CCTGATGCGA TACCTGCCCG 251 AAGACAAATG GCTTGCCTTG AAGCAGGCGG
GTTTGCTGTT GCCCTTCCTC 301 GACAAAAAAC ACGGCGGGCG CAAGGGCAGT
CAGTTTGAAA TCCAAGAAGT 351 CCTAAGGATT GCGGGGCATT ACGGCGTGCC
CGTTACGCTG CGTACCGGCA 401 TCGAAGGCGC GCTGGTGTTG CAGCCTCTGC
AAGagttcgg cggcgaagcG 451 CAAGTCGCAC AAGGTTTGGA CATGATTTTC
AAaggcgaaa gccgccgttt 501 gggcgTtacc gaacccgaAa cctccggcgc
gGcgaTTGCA CGCGAAAtgc 551 agtcctgcta cgaatatacc gacgaacaAA
CCATTTACGT caaCGCCGCG 601 AAATACTGGC AGGGCAATTC GCAAAGCGAC
TTCCTcctcg ttgccgccaa 651 agagcgcaaa aacGGcaaac tcgccaaagt
CATCGACCTG CTGCTCGTCC 701 CCAAAACATA CATCCGCTGC GAAACCCTCG
CATCCGAAGG CCTGCGCGCC 751 GTCCGTTACG CCGTCAACCG CATCGATGCC
GAAATGCCTG CAACCGCCGT 801 GATGAAACTC TCCCGGGGCG ACGCTGCCGG
TTTGCGCGCG TTCCAAAACA 851 TCTTTATCCG CAGCCGCCTG CAACTGATCG
GCATGACGCA CGGCATTATG 901 GAATACATCC TTGACAACCT GAACCGATAT
GTCCGCAACG ATATCAGATT 951 CGTCGATTAC GAACGCCGCG AAATCCAACG
CCGCCATCAG GTTTCCGAAA 1001 TCCTTTACCG CTACGTCTGC CATTCCGTTT
CGcccgtcgC GCccgTCGCC 1051 CATCAATTGA TGGAGGCGAA catcgTCAAA
ACcctCGCCA CGGAATACAC 1101 TTAcgcCGCC GCGCAAATGT TGCAAAAACT
CTTGGGCGCG AAGGGTTTTG 1151 AACGCGGACA CCCAGCCGGC AATATCGCCA
TCGATATCCG CCCCTTCACG 1201 ATTTTTGAAG GCCCGAACGA TATGCTTTAT
GCCGAAATTT ACGACCAGTT 1251 CGTCCGCGCC ACCGCCGAAG AAAAAGAAGC
AGGCATTAAG TTGGACAAAA 1301 accaaaCCCT Gctcgacgcc gtgCAAaccg
atGTCcgctt tgCCGCCGTT 1351 GCCcgcGacT ACGCTTTGCC CGAAGACATC
CGCAGCTTCC TGCAGGAACA 1401 CACCCTGACC GACGCCTGCG CCCTGCAAAA
AGTCTTCATC GGCAAAATCA 1451 TCGCCCGACT TTTTGTCTTC GTACAGGAGG
AACACGAAGA CACCACAGCC 1501 TTCCTGCTGA ACGACATCCG CAAAGATATA
TTGGACTGCC GATATTGCGG 1551 ATAG
This corresponds to the amino acid sequence <SEQ ID 2070; ORF
644.ng>:
TABLE-US-02460 g644.pep 1 MPSERPADCC PVHFVVKFRK LTLNCGRRFD
RPPINGNRQR KPMIHTEPSA 51 QPSTMDTAAF LKHIESAFPR IFSDGIDLMR
YLPEDKWLAL KQAGLLLPFL 101 DKKHGGRKGS QFEIQEVLRI AGHYGVPVTL
RTGIEGALVL QPLQEFGGEA 151 QVAQGLDMIF KGESRRLGVT EPETSGAAIA
REMQSCYEYT DEQTIYVNAA 201 KYWQGNSQSD FLLVAAKERK NGKLAKVIDL
LLVPKTYIRC ETLASEGLRA 251 VRYAVNRIDA EMPATAVMKL SRGDAAGLRA
FQNIFIRSRL QLIGMTHGIM 301 EYILDNLNRY VRNDIRFVDY ERREIQRRHQ
VSEILYRYVC HSVSPVAPVA 351 HQLMEANIVK TLATEYTYAA AQMLQKLLGA
KGFERGHPAG NIAIDIRPFT 401 IFEGPNDMLY AEIYDQFVRA TAEEKEAGIK
LDKNQTLLDA VQTDVRFAAV 451 ARDYALPEDI RSFLQEHTLT DACALQKVFI
GKIIARLFVF VQEEHEDTTA 501 FLLNDIRKDI LDCRYCG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2071>:
TABLE-US-02461 m644.seq 1 ATGCCGTCTG AAAGGTCGGC GGATTGTTGC
CCGGCGCACT TTGTGGTAAA 51 GTTTAGAAAA TCAACTCTAA ACTGTGGCAG
GCGGTTTGAC CGGCCGCCGA 101 TTAATGGGAA CCGACAGAGG AAGCCGATGA
TACACACCGA ACCGAGCGCG 151 CAGCCGTCAA CTATGGACAC GGCTGCTTTT
TTAAAGCACA TCGAATCCGC 201 ATTCCGCCGC ATTTTTTCAG ACGGTATCGA
CCTGATGCGA TACCTGCCCG 251 AAGACAAATG GCTTGCCTTG AAGCAGGCGG
GTTTGCTGTT GCCCTTCCTC 301 GACAAAAAAT ACGGCGGGCG CAAGGGCAGC
CAGTTTGAAA TCCAAGAAGT 351 CcTGCGGATT GCGGGGCATT ACGGCGTGCC
CGTTACGCTG CGTACCGGCA 401 TCGAAGGCGC GCTGGTGTTG CAGCCACTGC
AAGAGTTCGG CGATGAAGCG 451 CAAGTCGCGC AAGGTTTGGA GATGATTTTC
AAAGGCGAGG GCGGCGGTTT 501 GGGTGTTACC GAACCCGAAA CCTCCGGCGC
GGCGATTGCA CGCGAAATGC 551 AGTCCTACTA CGAATATATC GACGGACAAA
CCATTTACGT CAACGCCGCG 601 AAATACTGGC AGGGCAACTC GCAAAGCGAC
TTCCTCCTCG TTGCCGCCAA 651 AGAGCGCAAA AACGGCAAAC TCGCCAAAGT
CATCGACCTG CTGCTCGTCC 701 CCAAAACATA CATCCGCTGC GAAACCCTCG
CATCCGAAGG CTTGCGCGCC 751 GTCCGTTACG CCGTCAACCG CATCGATGCC
GAAATGCCTG CAACCGCCGT 801 GATGAAACTC TCCCAGAGCG ACGCTGCCGG
TTTGCGCGCG TTCCAAAACA 851 TCTTTATCCG CAGCCGCCTG CAACTGATCG
GCATGACGCA CGGCATTATG 901 GAATACATCC TTGAAAATCT GGAACGATAC
GTCCGCAACG ACATCAAATT 951 CGTCGATTAC GAACGCCGCG AAATCCGGCG
CCGCCATCAG GTTTCCGAGA 1001 TTCTTTACCG CTACGTCTGC CATTCCGTTT
CGCCTGTTGC CCCCGTCGCC 1051 CATCAGCTGA TGGAGGCGAA CATCGTCAAA
ACCCTCGCCA CGGAATACAC 1101 TTACGCCGCC GCGCAAATGT TGCAAAAACT
CTTGGGTGCG AAGGGTTTTG 1151 AACGCGGACA CACCGCCGGC AATATCGCTA
TCGACATCCG CCCCTTCACG 1201 ATTTTTGAAG GCCCGAACGA TATGCTTTAT
GCCGAAATTT ACGACCAGTT 1251 TGTCCGCGCC ACCGCCGAAG AAAAAGAAGC
AGGCATGAAG TTGGACAAAA 1301 ACCAAACCCT GCTCGACCGC CTGCAAACCG
ATGCCCGCTT TGCCGCCGTC 1351 GCCCGCGACT ACACTTTGCC TGAAGACATC
CGCAGCTTCC TGCAGGAACA 1401 CACCCTGACC GATGCCTGCG CCCTGCAAAA
AGTCTTTATC GGCAAAATCA 1451 TCGCCCGACT CTTTGTCTTC GTACAGGCGA
AACACGAAGA CACCGCAGCC 1501 TTCCTGCTGA ACGACATCCG CAAAGATATA
TTGGACTGCC GATATTGCGG 1551 GTAG
This corresponds to the amino acid sequence <SEQ ID 2072; ORF
644>:
TABLE-US-02462 m644.pep 1 MPSERSADCC PAHFVVKFRK STLNCGRRFD
RPPINGNRQR KPMIHTEPSA 51 QPSTMDTAAF LKHIESAFRR IFSDGIDLMR
YLPEDKWLAL KQAGLLLPFL 101 DKKYGGRKGS QFEIQEVLRI AGHYGVPVTL
RTGIEGALVL QPLQEFGDEA 151 QVAQGLEMIF KGEGGGLGVT EPETSGAAIA
REMQSYYEYI DGQTIYVNAA 201 KYWQGNSQSD FLLVAAKERK NGKLAKVIDL
LLVPKTYIRC ETLASEGLRA 251 VRYAVNRIDA EMPATAVMKL SQSDAAGLRA
FQNIFIRSRL QLIGMTHGIM 301 EYILENLERY VRNDIKFVDY ERREIRRRHQ
VSEILYRYVC HSVSPVAPVA 351 HQLMEANIVK TLATEYTYAA AQMLQKLLGA
KGFERGHTAG NIAIDIRPFT 401 IFEGPNDMLY AEIYDQFVRA TAEEKEAGMK
LDKNQTLLDR LQTDARFAAV 451 ARDYTLPEDI RSFLQEHTLT DACALQKVFI
GKIIARLFVF VQAKHEDTAA 501 FLLNDIRKDI LDCRYCG* m644/g644 94.6%
identity in 517 aa overlap 10 20 30 40 50 60 m644.pep
MPSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF |||||
|||||:|||||||| ||||||||||||||||||||||||||||||||||||||| g644
MPSERPADCCPVHFVVKFRKLTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF 10 20
30 40 50 60 70 80 90 100 110 120 m644.pep
LKHIESAFRRIFSDGIDLMRYLPEDKWLALKQAGLLLPFLDKKYGGRKGSQFEIQEVLRI
|||||||| ||||||||||||||||||||||||||||||||||:|||||||||||||||| g644
LKHIESAFPRIFSDGIDLMRYLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRI 70 80
90 100 110 120 130 140 150 160 170 180 m644.pep
AGHYGVPVTLRTGIEGALVLQPLQEFGDEAQVAQGLEMIFKGEGGGLGVTEPETSGAAIA
||||||||||||||||||||||||||| ||||||||:||||||: |||||||||||||| g644
AGHYGVPVTLRTGIEGALVLQPLQEFGGEAQVAQGLDMIFKGESRRLGVTEPETSGAAIA 130
140 150 160 170 180 190 200 210 220 230 240 m644.pep
REMQSYYEYIDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC |||||
||| | |||||||||||||||||||||||||||||||||||||||||||||||| g644
REMQSCYEYTDEQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC 190
200 210 220 230 240 250 260 270 280 290 300 m644.pep
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIM
|||||||||||||||||||||||||||||||::||||||||||||||||||||||||||| g644
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSRGDAAGLRAFQNIFIRSRLQLIGMTHGIM 250
260 270 280 290 300 310 320 330 340 350 360 m644.pep
EYILENLERYVRNDIKFVDYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK
||||:||:|||||||:|||||||||:|||||||||||||||||||||||||||||||||| g644
EYILDNLNRYVRNDIRFVDYERREIQRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK 310
320 330 340 350 360 370 380 390 400 410 420 m644.pep
TLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| g644
TLATEYTYAAAQMLQKLLGAKGFERGHPAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA 370
380 390 400 410 420 430 440 450 460 470 480 m644.pep
TAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
||||||||:|||||||||| :|||:|||||||||:||||||||||||||||||||||||| g644
TAEEKEAGIKLDKNQTLLDAVQTDVRFAAVARDYALPEDIRSFLQEHTLTDACALQKVFI 430
440 450 460 470 480 490 500 510 m644.pep
GKIIARLFVFVQAKHEDTAAFLLNDIRKDILDCRYCGX ||||||||||||
:||||:||||||||||||||||||| g644
GKIIARLFVFVQEEHEDTTAFLLNDIRKDILDCRYCGX 490 500 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2073>:
TABLE-US-02463 a644.seq 1 ATGCCGTCTG AAAGGTCGGC GGATTGTTGC
CCGGCGCACT TTGTGGTAAA 51 GTTTAGAAAA TCAACTCTAA ACTGTGGCAG
GCGGTTTGAC CGGCCGCCGA 101 TTAATGGGAA CCGACAGAGG AAGCCGATGA
TACACACCGA ACCGAGCGCG 151 CAGCCGTCAA CTATGGACAC GGCTGCTTTT
TTAAAGCACA TCGAATCCGC 201 ATTCCGCCGC ATTTTTGCAG ACGGTATCGA
CCTGATGCGA TACCTGCCCG 251 AAGACAAATG GCTTGCCTTG AAGCAGGCGG
GTTTGCTGTT GCCCTTCCTC 301 GACAAAAAAT ACGGCGGGCG CAAGGGCAGC
CAGTTTGAAA TTCAGGAAGT 351 CTTGCGGATT GCGGGGCATT ACGGCGTGCC
CGTTANNNNN NNNNNNNNNN 401 NNGAAGGCGC GCTGGTGTTG CAGCCACTGC
AAGAGTTCGG CGATGAAGCG 451 CAAATCGCAC AGGGTTTGGA CATGGTTTTC
AAAGGCGAGG GCGGCGGTTT 501 AGGCGTTACC GAACCCGAAA CCTCCGGCGC
GGCGATTGCC CGAGAAATGC 551 AGTCTTACTA CGAATATACC GACGGACAAA
CCATTTACGT CAACGCCGCG 601 AAATACTGGC AGGGCAACTC GCAAAGCGAC
TTCCTCCTCG TTGCCGCCAA 651 AGAGCGCAAA AACGGCAAAC TCGCCAAAGT
CATCGACCTG CTGCTCGTCC 701 CCAAAACATA CATCCGCTGC GAAACCCTCG
CATCCGAAGG CTTGCGCGCC 751 GTCCGTTACG CCGTCAACCG CATCGATGCC
GAAATGCCTG CAACCGCCGT 801 GATGAAACTC TCCCAGAGCG ACGCTGCCGG
TTTGCGCGCG TTCCAAAACA 851 TCTTTATCCG CAGCCGCCTG CAACTGATCG
GCATGACGCA CGGCATTATG 901 GAATACACCC TTGAAAACCT GGAACGATAC
GTCCGCAACG ACATCAGATT 951 CGTCGATTAC GAACGCCGCG AAATCCGGCG
CCGCCATCAG GTTTCCGAGA 1001 TTCTTTACCG CTACGTCTGC CATTCCGTTT
CGCCCGTTGC ACCCGTCGCC 1051 CATCAACTGA TGGAGGCGAA CATCGTCAAA
ACCCTCGCCA CGGAATACAC 1101 TTACGCCGCC GCGCAAATGT TGCAAAAACT
CTTGGGCGCG AAGGGTTTTG 1151 AACGCGGACA CACCGCCGGC AATATCGCTA
TCGACATCCG CCCCTTCACG 1201 ATTTTTGAAG GCCCGAACGA TATGCTTTAT
GCCGAAATTT ACGACCAGTT 1251 TGTCCGCGCC ACCGCCGAAG AAAAAGAAGC
AGGCATGAAG TTGGACAAAA 1301 ACCAAACCCT GCTCGACCGC CTGCAAACCG
ATGCCCGCTT TGCCGCCGTC 1351 GCCCGCGACT ACACTTTGCC CGAAGACATC
CGCAGCTTCC TGCAGGAACA 1401 CACCCTGACC GATGCCTGCG CCCTGCAAAA
AGTCTTTATC GGCAAAATCA 1451 TCGCCCGACT CTTTGTCTTC GTACAGGCGG
AACACGAAGA CACCGCAGCC 1501 TTCCTGCTGA ACGACATCCG CAAAGACATA
TTGGACTGCC GATATTGCGG 1551 ATAG
This corresponds to the amino acid sequence <SEQ ID 2074; ORF
644.a>:
TABLE-US-02464 a644.pep 1 MPSERSADCC PAHFVVKFRK STLNCGRRFD
RPPINGNRQR KPMIHTEPSA 51 QPSTMDTAAF LKHIESAFRR IFADGIDLMR
YLPEDKWLAL KQAGLLLPFL 101 DKKYGGRKGS QFEIQEVLRI AGHYGVPVXX
XXXXEGALVL QPLQEFGDEA 151 QIAQGLDMVF KGEGGGLGVT EPETSGAAIA
REMQSYYEYT DGQTIYVNAA 201 KYWQGNSQSD FLLVAAKERK NGKLAKVIDL
LLVPKTYIRC ETLASEGLRA 251 VRYAVNRIDA EMPATAVMKL SQSDAAGLRA
FQNIFIRSRL QLIGMTHGIM 301 EYTLENLERY VRNDIRFVDY ERREIRRRHQ
VSEILYRYVC HSVSPVAPVA 351 HQLMEANIVK TLATEYTYAA AQMLQKLLGA
KGFERGHTAG NIAIDIRPFT 401 IFEGPNDMLY AEIYDQFVRA TAEEKEAGMK
LDKNQTLLDR LQTDARFAAV 451 ARDYTLPEDI RSFLQEHTLT DACALQKVFI
GKIIARLFVF VQAEHEDTAA 501 FLLNDIRKDI LDCRYCG* m644/a644 97.3%
identity in 517 aa overlap 10 20 30 40 50 60 m644.pep
MPSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a644
MPSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF 10 20
30 40 50 60 70 80 90 100 110 120 m644.pep
LKHIESAFRRIFSDGIDLMRYLPEDKWLALKQAGLLLPFLDKKYGGRKGSQFEIQEVLRI
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a644
LKHIESAFRRIFADGIDLMRYLPEDKWLALKQAGLLLPFLDKKYGGRKGSQFEIQEVLRI 70 80
90 100 110 120 130 140 150 160 170 180 m644.pep
AGHYGVPVTLRTGIEGALVLQPLQEFGDEAQVAQGLEMIFKGEGGGLGVTEPETSGAAIA
||||||||: : |||||||||||||||||:||||:|:||||||||||||||||||||| a644
AGHYGVPVXXXXXXEGALVLQPLQEFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIA 130
140 150 160 170 180 190 200 210 220 230 240 m644.pep
REMQSYYEYIDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| a644
REMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC 190
200 210 220 230 240 250 260 270 280 290 300 m644.pep
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a644
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIM 250
260 270 280 290 300 310 320 330 340 350 360 m644.pep
EYILENLERYVRNDIKFVDYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK ||
||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a644
EYTLENLERYVRNDIRFVDYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK 310
320 330 340 350 360 370 380 390 400 410 420 m644.pep
TLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a644
TLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA 370
380 390 400 410 420 430 440 450 460 470 480 m644.pep
TAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a644
TAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI 430
440 450 460 470 480 490 500 510 m644.pep
GKIIARLFVFVQAKHEDTAAFLLNDIRKDILDCRYCGX
|||||||||||||:|||||||||||||||||||||||| a644
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCGX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2075>:
TABLE-US-02465 g645.seq 1 ATGATGATGG TGTTGGCGTT GGGGATGTCG
ATGCCGGTTT CGATGATGGT 51 GGAACAGAGC AACACATTGA ATCTTTGCTG
CAAAAAGTCG CGCATGACTT 101 GTTCCAGCTC GCGCTCACGC AGTTGTCCGT
GCGCCACGCC GATACGGGCT 151 TCGGGCAGCA GGGTTTCCAG CCGCTCGCGC
ATATTCTCAA TCGTATCTAC 201 TTCATTGTGC AGGAAAAata cCTGTCCTCC
GCGTTTGAGT TCGCGCAACA 251 CGGCTTCGCG CACGCTGCCT TCGCTGAACG
GTTTGACAAA GGTTTTCACG 301 GCGAGGCGGC GGCTCGGTGC AGTGGTAATC
AGCGAGAAGT CGCGCAGACC 351 TTCGAGCGCC ATGCTGAGGG TGCGCGGAAT
CGGCGTGGCG GTCATGGTTA 401 GGATGTCGAC ATTGGCGCGC AGGCGTTTGA
GCTGCTCTTT CTGTCGCACG 451 CCGAAGCGGT GTTCTTCATC GATAATCAAT
AAACCTAAGT TTTTGAATTT 501 TATGTCGTCC TGCACCAATT TGTGCGTACC
GATAACGATA TCGACAGTAC 551 CGTCCGCCAT GCCTTCGAGC GTGGCTTTGG
TGGCTTTGCT GTTGTTGAAA 601 CGCGAAAGGC TGGCGACTTT CACGGGGAAA
TCGGCGAAAC GGTCGGCGAA 651 GTTTTGCGCG TGCTGCTCGA CCAGAAGCGT
GGTCGGGGCG AGTACGGCGA 701 CCTGTTTGCC GCCCATCACC GCCACAAACG
CGGCGCGAAG GGCGACTTCG 751 GTTTTGCCGA AACCGACATC GCCGCACACA
AGTCGGTCCA TCGGCTTCGC 801 CTGCGTCAAA TCTTTAATCA CGGcggcgat
ggcggcggcC TGGTCTTCGG 851 TTTCCTCGTA G
This corresponds to the amino acid sequence <SEQ ID 2076; ORF
645.ng>:
TABLE-US-02466 g645.pep 1 MMMVLALGMS MPVSMMVEQS NTLNLCCKKS
RMTCSSSRSR SCPCATPIRA 51 SGSRVSSRSR IFSIVSTSLC RKNTCPPRLS
SRNTASRTLP SLNGLTKVFT 101 ARRRLGAVVI SEKSRRPSSA MLRVRGIGVA
VMVRMSTLAR RRLSCSFCRT 151 PKRCSSSIIN KPKFLNFMSS CTNLCVPITI
STVPSAMPSS VALVALLLLK 201 RERLATFTGK SAKRSAKFCA CCSTRSVVGA
STATCLPPIT ATNAARRATS 251 VLPKPTSPHT SRSIGFACVK SLITAAMAAA
WSSVSS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2077>:
TABLE-US-02467 m645.seq 1 ATGATGATGG TGTTGGCGTT GGGGATATCG
ATACCGGTTT CGATGATGGT 51 GGAACAGAGC AACACGTTAA ATCGTTGCTG
CAAAAAGTCG CGCATGACTT 101 GTTCCAGCTC GCGCTCGCGC AGTTGTCCGT
GCGCCACGCC GATGCGGGCT 151 TCGGGCAGCA GGGTTTCCAG CCGCTCGCGC
ATATTTTCAA TCGTATCTAC 201 TTCATTGTGC AGGAAAAATA CCTGTCCTCC
GCGTTTGAGT TCGCGCAACA 251 CGGCTTCGCG CACGCTGCCT TCGCTAAAGG
GTTTGACAAA GGTTTTGACG 301 GCGAGGCGGC GGCTGGGCGC GGTGGTAATC
AGCGAGAAGT CGCGCAGTCC 351 TTCCAACGCC ATACTTAAAG TACGCGGAAT
CGGCGTGGCG GTCATGGTAA 401 GGATATCAAC ATTGGCGCGC AGGCGTTTGA
GCTGCTCTTT CTGACGCACG 451 CCGAAGCGGT GTTCTTCGTC GATAATCACT
AAACCTAAGT TTTTGAATTT 501 GATGTCGTCC TGCACCAGTT TGTGCGTACC
GATAACAATA TCGACCGTGC 551 CGTCTGCCAT GCCTTCCAGC GCGGCTTTGG
TGGCTTTGCT GTTGTTGAAA 601 CGCGAAAGGC TGGCGACTTT CACGGGGAAA
TCGGCGAAAC GGTCGGCGAA 651 GTTTTGCGCG TGCTGCTCGA CCAAAAGCGT
GGTCGGAGCA AGTACGGCGA 701 CCTGTTTGCC GCCCATCACC GCCACAAACG
CGGCGCGCAG GGCGACTTCG 751 GTTTTGCCGA AGCCGACATC GCCGCACACA
AGGCGATCCA TCGGCTTCGC 801 TTGCGTCAAA TCTTTAATCA CGGCGGCGAT
GGCGGCGGCC TGGTCTTCGG 851 TTTCCTCGTA G
This corresponds to the amino acid sequence <SEQ ID 2078; ORF
645>:
TABLE-US-02468 m645.pep 1 MMMVLALGIS IPVSMMVEQS NTLNRCCKKS
RMTCSSSRSR SCPCATPMRA 51 SGSRVSSRSR IFSIVSTSLC RKNTCPPRLS
SRNTASRTLP SLKGLTKVLT 101 ARRRLGAVVI SEKSRSPSNA ILKVRGIGVA
VMVRISTLAR RRLSCSF*RT 151 PKRCSSSIIT KPKFLNLMSS CTSLCVPITI
STVPSAMPSS AALVALLLK 201 RERLATFTGK SAKRSAKFCA CCSTKSVVGA
STATCLPPIT ATNAARRATS 251 VLPKPTSPHT RRSIGFACVK SLITAAMAAA WSSVSS*
m645/g645 93.7% identity in 286 aa overlap 10 20 30 40 50 60
m645.pep
MMMVLALGISIPVSMMVEQSNTLNRCCKKSRMTCSSSRSRSCPCATPMRASGSRVSSRSR
||||||||:|:||||||||||||| ||||||||||||||||||||||:|||||||||||| g645
MMMVLALGMSMPVSMMVEQSNTLNLCCKKSRMTCSSSRSRSCPCATPIRASGSRVSSRSR 10 20
30 40 50 60 70 80 90 100 110 120 m645.pep
IFSIVSTSLCRKNTCPPRLSSRNTASRTLPSLKGLTKVLTARRRLGAVVISEKSRSPSNA
||||||||||||||||||||||||||||||||:|||||:|||||||||||||||| ||:| g645
IFSIVSTSLCRKNTCPPRLSSRNTASRTLPSLNGLTKVFTARRRLGAVVISEKSRRPSSA 70 80
90 100 110 120 130 140 150 160 170 180 m645.pep
ILKVRGIGVAVMVRISTLARRRLSCSFXRTPKRCSSSIITKPKFLNLMSSCTSLCVPITI
:|:|||||||||||:|||||||||||| |||||||||||:||||||:|||||:||||||| g645
MLRVRGIGVAVMVRMSTLARRRLSCSFCRTPKRCSSSIINKPKFLNFMSSCTNLCVPITI 130
140 150 160 170 180 190 200 210 220 230 240 m645.pep
STVPSAMPSSAALVALLLLKRERLATFTGKSAKRSAKFCACCSTKSVVGASTATCLPPIT
||||||||||:|||||||||||||||||||||||||||||||||:||||||||||||||| g645
STVPSAMPSSVALVALLLLKRERLATFTGKSAKRSAKFCACCSTRSVVGASTATCLPPIT 190
200 210 220 230 240 250 260 270 280 m645.pep
ATNAARRATSVLPKPTSPHTRRSIGFACVKSLITAAMAAAWSSVSSX
|||||||||||||||||||| |||||||||||||||||||||||||| g645
ATNAARRATSVLPKPTSPHTSRSIGFACVKSLITAAMAAAWSSVSSX 250 260 270 280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2079>:
TABLE-US-02469 a645.seq 1 ATGATGATGG TGTTGGCGTT GGGAATGTCG
ATACCGGTTT CGATGATGGT 51 GGAACAGAGC AACACGTTAA ATCGTTGCTG
CAAAAAGTCG CGCATGACTT 101 GTTCCAGCTC GCGCTCGCGC AGTTGTCCGT
GCGCCACGCC GATGCGGGCT 151 TCGGGCAGCA GGGTTTCCAG CCGCTCACGC
ATGTTTTCGA TGGTATCCAC 201 TTCATTGTGC AGGAAAAATA CTTGCCCGCC
GCGTTTGAGT TCGCGCAATA 251 CGGCTTCGCG CACGCTGCCT TCGCTGAACG
GTTTGACAAA GGTTTTGACG 301 GCGAGGCGGC GGCTGGGCGC AGTGGTAATC
AGCGAGAAGT CGCGCAGTCC 351 TTCCAGCGCC ATACTTAAAG TACGCGGAAT
CGGCGTAGCG GTCATGGTAA 401 GGATGTCGAC ATTGGCGCGC AGGCGTTTGA
GCTGCTCTTT CTGACGCACG 451 CCGAAGCGGT GTTCTTCGTC GATAATCACT
AAACCTACGT TTTTGAATTT 501 TATGTCGTCC TGCACCAGTT TGTGCGTACC
GATAACAATA TCGACCGTGC 551 CGTCCGCCAT GCCTTCCAGC GCGGCTTTGG
TGGCTTTGCT GTTGTTGAAA 601 CGCGAAAGGC TGGCGACTTT CACGGGGAAA
TCGGCGAAGC GGTCGGCAAA 651 ATTTTGCGCG TGCTGCTCGA CCAGAAGCGT
GGTCGGTGCG AGTACGGCAA 701 CTTGTTTGCC ACCCATTACC GCCACAAACG
CGGCGCGCAG GGCGACTTCG 751 GTTTTGCCGA AACCGACATC GCCGCACACG
AGGCGGTCCA TCGGCTTCGC 801 CTGCGTCAAA TCTTTAATCA CGGCGGCGAT
GGCGGCTGCC TGGTCTTCGG 851 TTTCTTCGTA G
This corresponds to the amino acid sequence <SEQ ID 2080; ORF
645.a>:
TABLE-US-02470 a645.pep 1 MMMVLALGMS IPVSMMVEQS NTLNRCCKKS
RMTCSSSRSR SCPCATPMRA 51 SGSRVSSRSR MFSMVSTSLC RKNTCPPRLS
SRNTASRTLP SLNGLTKVLT 101 ARRRLGAVVI SEKSRSPSSA ILKVRGIGVA
VMVRMSTLAR RRLSCSF*RT 151 PKRCSSSIIT KPTFLNFMSS CTSLCVPITI
STVPSAMPSS AALVALLLLK 201 RERLATFTGK SAKRSAKFCA CCSTRSVVGA
STATCLPPIT ATNAARRATS 251 VLPKPTSPHT RRSIGFACVK SLITAAMAAA WSSVSS*
m645/a645 96.9% identity in 286 aa overlap 10 20 30 40 50 60
m645.pep
MMMVLALGISIPVSMMVEQSNTLNRCCKKSRMTCSSSRSRSCPCATPMRASGSRVSSRSR
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| a645
MMMVLALGMSIPVSMMVEQSNTLNRCCKKSRMTCSSSRSRSCPCATPMRASGSRVSSRSR 10 20
30 40 50 60 70 80 90 100 110 120 m645.pep
IFSIVSTSLCRKNTCPPRLSSRNTASRTLPSLKGLTKVLTARRRLGAVVISEKSRSPSNA
:||:||||||||||||||||||||||||||||:|||||||||||||||||||||||||:| a645
MFSMVSTSLCRKNTCPPRLSSRNTASRTLPSLNGLTKVLTARRRLGAVVISEKSRSPSSA 70 80
90 100 110 120 130 140 150 160 170 180 m645.pep
ILKVRGIGVAVMVRISTLARRRLSCSFXRTPKRCSSSIITKPKFLNLMSSCTSLCVPITI
||||||||||||||:||||||||||||||||||||||||||| |||:||||||||||||| a645
ILKVRGIGVAVMVRMSTLARRRLSCSFXRTPKRCSSSIITKPTFLNFMSSCTSLCVPITI 130
140 150 160 170 180 190 200 210 220 230 240 m645.pep
STVPSAMPSSAALVALLLLKRERLATFTGKSAKRSAKFCACCSTKSVVGASTATCLPPIT
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| a645
STVPSAMPSSAALVALLLLKRERLATFTGKSAKRSAKFCACCSTRSVVGASTATCLPPIT 190
200 210 220 230 240 250 260 270 280 m645.pep
ATNAARRATSVLPKPTSPHTRRSIGFACVKSLITAAMAAAWSSVSSX
||||||||||||||||||||||||||||||||||||||||||||||| a645
ATNAARRATSVLPKPTSPHTRRSIGFACVKSLITAAMAAAWSSVSSX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2081>:
TABLE-US-02471 g647.seq 1 ATGCAAAGGC TCGCCGCAGA CGGCATCCAA
ATCTTTTTTG TAGGTGTCGA 51 TGGGCAGTTT GCCTTGCGAA TAAACGGTTT
GGTTAAAGAG CGTGCACGCT 101 CCGTATTCTT TGGCAAGGTT TGCCGATGCT
TTGAGCAGGT AATACTGTAT 151 GGCTTCAAAG GTACGGTGGG TCAGACCGAG
CGCGGAACCG TCGCTGTAGC 201 GGACACCGTT TTTCGCCAGA TAGTAGGCGT
AGTTGATGAC ACCGATGCCG 251 AGCGAACGGC GGTCCATAGT AGAGGTACGC
GCGGCTTCTA CCGGATATCC 301 CTGATAATCT AA
This corresponds to the amino acid sequence <SEQ ID 2082; ORF
647.ng>:
TABLE-US-02472 g647.pep 1 MQRLAADGIQ IFFVGVDGQF ALRINGLVKE
RARSVFFGKV CRCFEQVILY 51 GFKGTVGQTE RGTVAVADTV FRQIVGVVDD
TDAERTAVHS RGTRGFYRIS 101 LII*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2083>:
TABLE-US-02473 m647.seq 1 ATGCAAAGGC TCGCCGCAGA CGGCATCCAA
ATCTTTTTTG TAAGTGTCGA 51 TGGGCAGTTT GCCTTGCGAA TAAACGGTTT
GGTTAAAGAG CGTGCACGCA 101 CCGTATTCTT TGGCAAGGTT TGCCGATGCT
TTGAGCAGGT AATACTGTAT 151 GGCTTCAAAG GTACGGTGGG TCAGACCGAG
CGCGGAACCG TCGCTGTAGC 201 GGACACCGTT TTTCGCCAGA TAATAAGCAT
AGTTAATCAC GCCGATGCCG 251 AGCGAACGGC GGCCCATAGT AGAGGTACGC
GCGGCTTCTA CCGGATATCC 301 CTGATAATCT AA
This corresponds to the amino acid sequence <SEQ ID 2084; ORF
647>:
TABLE-US-02474 m647.pep 1 MQRLAADGIQ IFFVSVDGQF ALRINGLVKE
RARTVFFGKV CRCFEQVILY 51 GFKGTVGQTE RGTVAVADTV FRQIISIVNH
ADAERTAAHS RGTRGFYRIS 101 LII* m647/g647 91.3% identity in 103 aa
overlap 10 20 30 40 50 60 m647.pep
MQRLAADGIQIFFVSVDGQFALRINGLVKERARTVFFGKVCRCFEQVILYGFKGTVGQTE
||||||||||||||:||||||||||||||||||:|||||||||||||||||||||||||| g647
MQRLAADGIQIFFVGVDGQFALRINGLVKERARSVFFGKVCRCFEQVILYGFKGTVGQTE 10 20
30 40 50 60 70 80 90 100 m647.pep
RGTVAVADTVFRQIISIVNHADAERTAAHSRGTRGFYRISLIIX ||||||||||||||:::|:
:||||||:|||||||||||||||| g647
RGTVAVADTVFRQIVGVVDDTDAERTAVHSRGTRGFYRISLIIX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2085>:
TABLE-US-02475 a647.seq 1 GTGCAAAGGC TCGTTACACA CAGCGTCCAA
GTCTTTTTTG TAGGTGTCGA 51 TGGGCAGTTT GCCTTGCGAA TAAACGGTTT
GGTTAAAGAG CGTGCACGCA 101 CCGTATTCTT TGGCAAGGTT TGCCGATGCT
TTGAGCAGGT AATACTGTAT 151 GGCTTCAAAG GTACGGTGGG TCAGACCGAG
CGCGGAGCCG TCGCTGTAGC 201 GGACACCGTT TTTCGCCAAA TAATACGCAT
AGTTGATCAC GCCGATACCG 251 AGCGAACGGC GGCCCATAGT GGAGGTACGC
GCGGCTTCTA CCGGATATCC 301 CTGATAATCT AA
This corresponds to the amino acid sequence <SEQ ID 2086; ORF
647.a>:
TABLE-US-02476 a647.pep 1 VQRLVTHSVQ VFFVGVDGQF ALRINGLVKE
RARTVFFGKV CRCFEQVILY 51 GFKGTVGQTE RGAVAVADTV FRQIIRIVDH
ADTERTAAHS GGTRGFYRIS 101 LII* m647/a647 87.4% identity in 103 aa
overlap 10 20 30 40 50 60 m647.pep
MQRLAADGIQIFFVSVDGQFALRINGLVKERARTVFFGKVCRCFEQVILYGFKGTVGQTE :|||::
::|:|||:||||||||||||||||||||||||||||||||||||||||||||| a647
VQRLVTHSVQVFFVGVDGQFALRINGLVKERARTVFFGKVCRCFEQVILYGFKGTVGQTE 10 20
30 40 50 60 70 80 90 100 m647.pep
RGTVAVADTVFRQIISIVNHADAERTAAHSRGTRGFYRISLIIX ||:||||||||||||
||:|||:||||||| ||||||||||||| a647
RGAVAVADTVFRQIIRIVDHADTERTAAHSGGIRGFYRISLIIX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2087>:
TABLE-US-02477 g648.seq 1 ATGAACAGGC GCAACGCGCG GATCGAACGG
GCTGTGCGTA TTGCAGTGAT 51 CGACGTTTTG AATGTAGATG CGCCCGGTCC
CGGCACGCTC CTGCATCAGC 101 GTGGAAAACA GGTCGGCAGC CGGAATGATA
CGCTTGCGTA TGTTCGGGTC 151 TTGCTCGTAT TTCGTATAGA GCCGCTCAAA
TTCGTCTTGG TCGGCAAAAA 201 ACGCTTCGTA CAACCCCGAA ACCTCGTTGG
GCGAAAACAG CGTAATGTTG 251 CCGCCCTTAA TCAGGCGGGT GTACAGCAGG
CGGTTGATTT GCACGCCATA 301 ATCAAGCTGG CGGATACGGT TGTCTTCCAC
GCCCCGGTTG TTTTTCAACA 351 CCAGCAGGCT TTCGGCTTCA ATATGCCACA
AGGGGTAGAA CAAGGTTGCC 401 GCGCCGCCGC GCACGCCACC TTGCGAACAA
GATTTGACCG CCGCCTGAAA 451 CATCTTAAAG AAGGGAATGC AGCCGGTATG
CCGGGCTTCA CCGCCCCGGA 501 TTTCGCTGTC CAGCCCGCGG ATACGTCCGG
CATTGATGCC GATGCCCGCG 551 CGTTGGGAAA CGTATTTCAC AATCGCGCTG
GTAGTGGCAT TGATGGAATC 601 CAAACTATCG TCGCATTCAA TCAGCACACA
GCTTGA
This corresponds to the amino acid sequence <SEQ ID 2088; ORF
648.ng>:
TABLE-US-02478 g648.pep 1 MNRRNARIER AVRIAVIDVL NVDAPGPGTL
LHQRGKQVGS RNDTLAYVRV 51 LLVFRIEPLK FVLVGKKRFV QPRNLVGRKQ
RNVAALNQAG VQQAVDLHAI 101 IKLADTVVFH APVVFQHQQA FGFNMPQGVE
QGCRAAAHAT LRTRFDRRLK 151 HLKEGNAAGM PGFTAPDFAV QPADTSGIDA
DARALGNVFH NRAGSGIDGI 201 QTIVAFNQHT A*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2089>:
TABLE-US-02479 m648.seq 1 ATGAACAGGC GCGACGCGCG GATCGAACGG
GCTGTGCGTA TTGCAGTGAT 51 CGACGTTTTG AATGTAGATG CGCCCGGTTC
CGGCACGCTC CTGCATCAGC 101 GTGGAAAACA GGTCGGCAGC CGGAATGATG
CGCTTGCGGA TATCAGGGTC 151 TTGCTCGTAT TTCGTATAGA GCCGCTCAAA
TTCGTCTTGG TCGGCAAAAA 201 ACGCTTCGTA CAATCCCGGA ACCTCGTTGG
GCGAAAACAG CGTAATGTTG 251 CCGCCCTTAA TCAGGCGGGT GTACAGCAGG
CGGTTGATTT GCACGCCGTA 301 ATCAAGCTGA CGGATACGGT TGTCTTCCAC
ACCGCGGTTG TTTTTCAACA 351 CCAGCAGGCT TTCGGCTTCG ATATGCCACA
AGGGGTAGAA CAAGGTTGCC 401 GCGCCGCCGC GCACGCCGCC TTGCGAACAG
GATTTGACCG CCGCCTGAAA 451 CATTTTAAAG AAGGGAATGC AGCCGGTATG
CCGCGCTTCG CCGCCCCGGA 501 TTTCGCTGTC CAAACCGCGG ATACGTCCGG
CATTGATGCC GATGCCCGCA 551 CGCTGGGAAA CGTATTTCAC AATCGCGCTG
GTAGTGGCAT TGATGGAATC 601 CAAACTATCG TCGCATTCAA TCAGCACACA
GCTTGA
This corresponds to the amino acid sequence <SEQ ID 2090; ORF
648>:
TABLE-US-02480 m648.pep 1 MNRRDARIER AVRIAVIDVL NVDAPGSGTL
LHQRGKQVGS RNDALADIRV 51 LLVFRIEPLK FVLVGKKRFV QSRNLVGRKQ
RNVAALNQAG VQQAVDLHAV 101 IKLTDTVVFH TAVVFQHQQA FGFDMPQGVE
QGCRAAAHAA LRTGFDRRLK 151 HFKEGNAAGM PRFAAPDFAV QTADTSGIDA
DARTLGNVFH NRAGSGIDGI 201 QTIVAFNQHT A* m648/g648 91.5% identity in
211 aa overlap 10 20 30 40 50 60 m648.pep
MNRRDARIERAVRIAVIDVLNVDAPGSGTLLHQRGKQVGSRNDALADIRVLLVFRIEPLK
||||:|||||||||||||||||| |||||||||||||||||||:|| :|||||||||||| g648
MNRRNARIERAVRIAVIDVLNVDAPGPGTLLHQRGKQVGSRNDTLAYVRVLLVFRIEPLK 10 20
30 40 50 60 70 80 90 100 110 120 m648.pep
FVLVGKKRFVQSRNLVGRKQRNVAALNQAGVQQAVDLHAVIKLTDTVVFHTAVVFQHQQA
||||||||||| |||||||||||||||||||||||||||:|||:||||||: |||||||| g648
FVLVGKKRFVQPRNLVGRKQRNVAALNQAGVQQAVDLHAIIKLADTVVFHAPVVFQHQQA 70 80
90 100 110 120 130 140 150 160 170 180 m648.pep
FGFDMPQGVEQGCRAAAHAALRTGFDRRLKHFKEGNAAGMPRFAAPDFAVQTADTSGIDA
|||:|||||||||||||||:||| |||||||:||||||||| |:||||||| |||||||| g648
FGFNMPQGVEQGCRAAAHATLRTRFDRRLKHLKEGNAAGMPGFTAPDFAVQPADTSGIDA 130
140 150 160 170 180 190 200 210 m648.pep
DARTLGNVFHNRAGSGIDGIQTIVAFNQHTAX |||:||||||||||||||||||||||||||||
g648 DARALGNVFHNRAGSGIDGIQTIVAFNQHTAX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2091>:
TABLE-US-02481 a648.seq 1 ATGAACAGGC GCAACGCGCG GATCGAACGG
GCTGTGCGTA TTGCAGTGAT 51 CGACGTTTTG AATGTAGATG CGCCCGGTTC
CGGCACGCTC CTGCATCAGC 101 GTGGAAAACA GGTCGGCAGC CGGAATGATG
CGCTTGCGGA TATCAGGGTC 151 TTGCTCGTAT TTCGTATAGA GCCGCTCAAA
TTCGTCTTGG TCGGCAAAAA 201 ACGCTTCGTA CAATCCCGGA ACCTCGTTGG
GCGAAAACAG CGTAATGTTG 251 CCGCCCTTAA TCAGGCGGGT GTACAGCAGG
CGGTTGATTT GCACGCCGTA 301 ATCAAGCTGA CGGATACGGT TGTCTTCCAC
GCCCCGGTTG TTTTTCAACA 351 CCAGCAGGCT TTCGGCTTCG ATATGCCACA
AGGGGTAGAA CAAGGTTGCC 401 GCGCCGCCGC GCACGCCACC TTGCGAACAG
GATTTGACTG CCGCCTGAAA 451 CATTTTAAAG AAGGGAATGC AGCCGGTATG
CCGTGCTTCG CCGCCCCGGA 501 TTTCGCTGTC CAGTCCGCGG ATACGTCCGG
CATTGATGCC GATGCCCGCA 551 CGCTGGGAAA CGTATTTCAC AATCGCGCTG
GTAGTGGCGT TGATGGAATC 601 CAGGCTGTCG TCGCATTCGA TCAATACGCA
GCTTGA
This corresponds to the amino acid sequence <SEQ ID 2092; ORF
648.a>:
TABLE-US-02482 a648.pep 1 MNRRNARIER AVRIAVIDVL NVDAPGSGTL
LHQRGKQVGS RNDALADIRV 51 LLVFRIEPLK FVLVGKKRFV QSRNLVGRKQ
RNVAALNQAG VQQAVDLHAV 101 IKLTDTVVFH APVVFQHQQA FGFDMPQGVE
QGCRAAAHAT LRTGFDCRLK 151 HFKEGNAAGM PCFAAPDFAV QSADTSGIDA
DARTLGNVFH NRAGSGVDGI 201 QAVVAFDQYA A* m648/a648 93.8% identity in
211 aa overlap 10 20 30 40 50 60 m648.pep
MNRRDARIERAVRIAVIDVLNVDAPGSGTLLHQRGKQVGSRNDALADIRVLLVFRIEPLK
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| a648
MNRRNARIERAVRIAVIDVLNVDAPGSGTLLHQRGKQVGSRNDALADIRVLLVFRIEPLK 10 20
30 40 50 60 70 80 90 100 110 120 m648.pep
FVLVGKKRFVQSRNLVGRKQRNVAALNQAGVQQAVDLHAVIKLTDTVVFHTAVVFQHQQA
||||||||||||||||||||||||||||||||||||||||||||||||||: |||||||| a648
FVLVGKKRFVQSRNLVGRKQRNVAALNQAGVQQAVDLHAVIKLTDTVVFHAPVVFQHQQA 70 80
90 100 110 120 130 140 150 160 170 180 m648.pep
FGFDMPQGVEQGCRAAAHAALRTGFDRRLKHFKEGNAAGMPRFAAPDFAVQTADTSGIDA
|||||||||||||||||||:|||||| |||||||||||||| |||||||||:|||||||| a648
FGFDMPQGVEQGCRAAAHATLRTGFDCRLKHFKEGNAAGMPCFAAPDFAVQSADTSGIDA 130
140 150 160 170 180 190 200 210 m648.pep
DARTLGNVFHNRAGSGIDGIQTIVAFNQHTAX ||||||||||||||||:||||::|||:|::||
a648 DARTLGNVFHNRAGSGVDGIQAVVAFDQYAAX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2093>:
TABLE-US-02483 g649.seq 1 ATGCTTGCCA TACTGTTGTC TGCAATACTG
GGACTGGTAT CAACAACTGC 51 CGCTGCCGGT ACGTCAGAAC CCGCCCACCG
ACATACCAAA CATATCAGCA 101 AGGCAAACAA GCAGATGCTG CACCCCGAAT
GCAGGAAATA TTTGGAACGC 151 CGTGCCGCGT GGTACCGATC GCAAGGCAAC
GTGCAGGAAT TGCGCGAAAA 201 CAAAAAGGCG CGCAAAGCAT TCCGCACCCT
GCCTTATGCG GAACAGAAAA 251 TCCAATGCCG GGCGGCTTAT GAGGCTTTCG
ATGATTTCGA CGGCGGCAGG 301 TTCCGCCGTT AA
This corresponds to the amino acid sequence <SEQ ID 2094; ORF
649.ng>:
TABLE-US-02484 g649.pep 1 MLAILLSAIL GLVSTTAAAG TSEPAHRHTK
HISKANKQML HPECRKYLER 51 RAAWYRSQGN VQELRENKKA RKAFRTLPYA
EQKIQCRAAY EAFDDFDGGR 101 FRR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2095>:
TABLE-US-02485 m649.seq 1 ATGCTTGCCA TACTGTTGTC TGCAATATTG
GGACTGGTAT CGACAACTGC 51 CGCTGCCGGT ACGTCAGAAC CCGCCCACCG
CGATACCAAA CATATCCGCA 101 AGGCAAACAA GCAGATGCTG CACCCCGAAT
GCAGGAAATA TTTGGAACGC 151 CGTGCCGCGT GGTACCGATC GCAAGGCAAC
GTGCAGGAAT TGCGCGAAAA 201 CAAAAAGGCG CGCAAAGCAT TCCGCTCCCT
GCCTTATGCG GAACAGAAAA 251 TCCAATGCCG GGCGGCTTAT GAGGCTTTCG
ATGATTTCGA CGGCGGCAGT 301 TTCCGCCGTT AA
This corresponds to the amino acid sequence <SEQ ID 2096; ORF
649>:
TABLE-US-02486 m649.pep 1 MLAILLSAIL GLVSTTAAAG TSEPAHRDTK
HIRKANKQML HPECRKYLER 51 RAAWYRSQGN VQELRENKKA RKAFRSLPYA
EQKIQCRAAY EAFDDFDGGS 101 FRR* m649/g649 96.1% identity in 103 aa
overlap 10 20 30 40 50 60 m649.pep
MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPECRKYLERRAAWYRSQGN
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| g649
MLAILLSAILGLVSTTAAAGTSEPAHRHTKHISKANKQMLHPECRKYLERRAAWYRSQGN 10 20
30 40 50 60 70 80 90 100 m649.pep
VQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFRRX
|||||||||||||||:||||||||||||||||||||||| |||| g649
VQELRENKKARKAFRTLPYAEQKIQCRAAYEAFDDFDGGRFRRX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2097>:
TABLE-US-02487 a649.seq 1 ATGCTTGCCA TACTGTTGTC TGCAATATTG
GGACTGGTAT CGACAACTGC 51 CGCTGCCGGT ACGTCAGAAC CCGCCCACCG
CGATACCAAA CATATCCGCA 101 AGGCAAACAA GCAGATGCTG CACCCCGAAT
GCAGGAAATA TTTGGAACGC 151 CGTGCCGCGT GGTACCGATC GCAAGGCAAC
GTGCAGGAAT TGCGCGAAAA 201 CAAAAAGGCG CGCAAAGCAT TCCGCTCCCT
GCCTTATAAG GAACAGAAAA 251 CCCAATGCCG GGCGGCTTAT GAGGCTTTCG
ATGATTTCGA CGGCAGCAGG 301 TTCCGCCGTT AA
This corresponds to the amino acid sequence <SEQ ID 2098; ORF
649.a>:
TABLE-US-02488 a649.pep 1 MLAILLSAIL GLVSTTAAAG TSEPAHRDTK
HIRKANKQML HPECRKYLER 51 RAAWYRSQGN VQELRENKKA RKAFRSLPYK
EQKTQCRAAY EAFDDFDGSR 101 FRR* m649/a649 96.1% identity in 103 aa
overlap 10 20 30 40 50 60 m649.pep
MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPECRKYLERRAAWYRSQGN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a649
MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPECRKYLERRAAWYRSQGN 10 20
30 40 50 60 70 80 90 100 m649.pep
VQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFRRX |||||||||||||||||||
||| ||||||||||||||: |||| a649
VQELRENKKARKAFRSLPYKEQKTQCRAAYEAFDDFDGSFRRX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2099>:
TABLE-US-02489 g650.seq 1 ATGTCCAAAC TCAAAACCAT CGCCCTGACC
GCATCAGGTC TGTCCGTTTG 51 TCCGGGTTTC CTATATGCCC AAAACACCTC
ATCACACCAA GTCGGTTTAG 101 CGATTATGCG GTTAAACTCT TCAATACTCG
ACCTGCCACC GACAAAACAA 151 TATTTCCAAT CCGGCAGCCT GTGGGACGAG
CTGCGCCAAG GCTTCCGGAT 201 GGGCGAAGTC AATCCCGAAC TGGTACGCCG
CCACGAAAGC AAATTCATCG 251 CAAGCCGCAG CTATTTCGAC AGGGTCGTCA
ACCGGAGCCG ACCCTATATG 301 TACCATATCG CCAACGAAGT CAAAAAACGC
AATATGCCCG CCGAAGCCGC 351 CCTGCTTCCC TTCATCGAAA GCGCGTTCGT
CACCAAAGCC AAATCACACG 401 TCGGCGCATC GGGCCTGTGG CAGTTCATGC
CCGCTACCGG CAGGCATTAC 451 GGCTTGGAAA AAACaccgGT TTACGacggc
aggcacGacg TTtacgcaGc 501 taccgatgcc gcacTCAACT AtctGcAATA
TCTCTAtggA CTGTTCGGCG 551 ACTGGCCGCT CGCCTTTGCC GCCTACAACT
GGGGTGAAGG CAACGTCGGA 601 CGCGCCGTCA ACCGCGCCCG CGACCAAGGG
CTCGAACCGA CCTACGAAAA 651 CCTGCGTATG CCCAACGAAA CGCGCAACTA
TGTCCCCAAG CTGCTCGCCG 701 TGCGCAACAT TATTGCCACC CCCCAATCTT
TCGGCATGAA TATCAGCGAC 751 ATAGACAACA AACCCTATTT TCAGGCAGTC
GAACCGGGCC GTCCGCTCGA 801 caacGAagcC ATCGCCCGGC TTGCCGGCAT
CACGCAAAGC GAGCTGCTCG 851 CCCTGAATCC TGCATTCAAC GTCCCCGCgt
tcatCCCCAA AAAcaaacgc 901 aaacTGCTGC TTCCTGTCGC GTCCGTCCAA
ACCTTccaaa gcaACTACCT 951 CAACGCCGCA CCCGACAGCC TGTTTTCATG
GGAAGTCTAT ACGCCTGCCG 1001 CCAAAACCAG CCTGTCCGAC ATCTCGACGG
CAACCGGCAT GAGCATTGCC 1051 GACATCAAAC GCCTCAACAA CCTGAACGGC
AACCTTGTCA ACGCAGGACG 1101 CAGCATCCTT GTCGCCAAGA ACGGCAAGAC
CCTTCATACG GCATCGGAat 1151 ccGTCGTTTC CATCGACATC GACAATACGC
CcgacacCTa ccgttccaaT 1201 ATGCcggcag gcaCGGTGAA CGTCAGCATt
gccCgaatcc aacCCgccgc 1251 cgcaCAGACA gcggacatta ccgtcgcacc
tttgccgcaa gaaaccgtcc 1301 gtacgggaac ccgatcccct tgtccgcaTt
accgaacccg ccctTGCGAC 1351 AGCCGCAGCg CaacctCAAA ccgAAAAACA
GACTGCCATG CcgtctGA
This corresponds to the amino acid sequence <SEQ ID 2100; ORF
650.ng>:
TABLE-US-02490 g650.pep 1 MSKLKTIALT ASGLSVCPGF LYAQNTSSHQ
VGLAIMRLNS SILDLPPTKQ 51 YFQSGSLWDE LRQGFRMGEV NPELVRRHES
KFIASRSYFD RVVNRSRPYM 101 YHIANEVKKR NMPAEAALLP FIESAFVTKA
KSHVGASGLW QFMPATGRHY 151 GLEKTPVYDG RHDVYAATDA ALNYLQYLYG
LFGDWPLAFA AYNWGEGNVG 201 RAVNRARDQG LEPTYENLRM PNETRNYVPK
LLAVRNIIAT PQSFGMNISD 251 IDNKPYFQAV EPGRPLDNEA IARLAGITQS
ELLALNPAFN VPAFIPKNKR 301 KLLLPVASVQ TFQSNYLNAA PDSLFSWEVY
TPAAKTSLSD ISTATGMSIA 351 DIKRLNNLNG NLVNAGRSIL VAKNGKTLHT
ASESVVSIDI DNTPDTYRSN 401 MPAGTVNVSI ARIQPAAAQT ADITVAPLPQ
ETVRTGTRSP CPHYRTRPCD 451 SRSATSNRKT DCHAV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2101>:
TABLE-US-02491 m650.seq 1 ATGTCCAAAC TCAAAACCAT CGCTCTGACC
GCATCAGGTC TGTCCGTTTG 51 TCCGGGTTTC CTATACGCCC AAAACACCTC
ATCACACCAA ATCGGTTTGG 101 CGATTATGCG CTTAAACTCT TCAATACTCG
ACCTGCCCCC GACAAAACAA 151 TATTTCCAAT CCGGCAGCCT GTGGGGCGAG
CTGCGCCAAG GCTTCCGGAT 201 GGGCGAAGTC AATCCCGAAC TGGTACGCCG
CCACGAAAGC AAATTCATCG 251 CAAGCCACAG CTATTTCAAC AGGGTCATCA
ACCGGAGTAG ACCCTATATG 301 TACCATATCG CCAACGAAGT CAAAAAACGC
AATATGCCCG CCGAAGCCGC 351 CCTGCTTCCC TTCATCGAAA GCGCGTTCGT
CACCAAAGCC AAATCACACG 401 TCGGCGCATC AGGATTATGG CAGTTTATGC
CCGCTACCGG CAGGCATTAC 451 GGCCTGGAAA AAACACCGGT TTACGACGGC
AGGCACGACG TTTACGCCGC 501 CACCGATGCC GCACTCAACT ATCTGCAATA
CCTCTATGGA CTGTTCGGCG 551 ACTGGCCGCT TGCCTTTGCC GCCTACAACT
GGGGTGAAGG CAACGTCGGA 601 CGCGCCATCA ACCGCGCCCG CGCCCAAGGG
CTCGAACCGA CCTACGAAAA 651 CCTGCGTATG CCCAACGAAA CGCGCAACTA
TGTCCCCAAG CTGCTCGCCG 701 TGCGCAACAT TATTGCCACT CCCCAATCTT
TCGGCATGAA TATCAGCGAC 751 ATAGACAACA AACCCTATTT TCAGGCAGTC
GAACCGGATC GTCCGCTCGA 801 CAACGAAGCC ATCGCCCGGC TTGCCGGCAT
CACGCAAAGC GAGCTGCTCG 851 CCCTAAACCC CGCATTCAAC GTCCCCGCGT
TTATCCCCAA AAGCAAACGC 901 AAACTGCTGC TTCCTGTCGC GTCCGTACAA
ACCTTCCAAA GCAACTACCT 951 CAACGCCGCA CCCGACAGCC TGTTTTCATG
GGAAGTCTAT ACGCCTGCCG 1001 CCAAAACCAG CCTGTCCGAC ATCTCGACGG
CAACCGGCAT GAGCATTGCC 1051 GACATCAAAC GCCTCAACAA CCTGAACGGC
AACCTTGTCA ACGCAGGACG 1101 CAGCATCCTT GTCGCCAAGA ACGGCAAAAC
CCTTCAGACG GCATCGGAAT 1151 CCGTCGTTTC CATCGACATC GACAATACGC
CCGACACCTA CCGTTCCAAT 1201 ATGCCGGCAG GCACGGTGAA CGTCGGCATT
GCCCGAATCC GACCCGCCGC 1251 CGCACAGACA GCGGACATTA CCGTCGCACC
TTTGCCGCAG AAAACCGTCC 1301 GTACGG.AAC CCGATCCCCT TGTCCGTATT
GCCGAACCTG CCCTTGCGAC 1351 AGCCGCAGCG CAACCTCAAA CCGAAAAACA
GACCGCCATG CCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 2102; ORF
650>:
TABLE-US-02492 m650.pep 1 MSKLKTIALT ASGLSVCPGF LYAQNTSSHQ
IGLAIMRLNS SILDLPPTKQ 51 YFQSGSLWGE LRQGFRMGEV NPELVRRHES
KFIASHSYFN RVINRSRPYM 101 YHIANEVKKR NMPAEAALLP FIESAFVTKA
KSHVGASGLW QFMPATGRHY 151 GLEKTPVYDG RHDVYAATDA ALNYLQYLYG
LFGDWPLAFA AYNWGEGNVG 201 RAINRARAQG LEPTYENLRM PNETRNYVPK
LLAVRNIIAT PQSFGMNISD 251 IDNKPYFQAV EPDRPLDNEA IARLAGITQS
ELLALNPAFN VPAFIPKSKR 301 KLLLPVASVQ TFQSNYLNAA PDSLFSWEVY
TPAAKTSLSD ISTATGMSIA 351 DIKRLNNLNG NLVNAGRSIL VAKNGKTLQT
ASESVVSIDI DNTPDTYRSN 401 MPAGTVNVGI ARIRPAAAQT ADITVAPLPQ
KTVRTXTRSP CPYCRTCPCD 451 SRSATSNRKT DRHAV* m650/g650 96.1%
identity in 465 aa overlap 10 20 30 40 50 60 m650.pep
MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILDLPPTKQYFQSGSLWGE
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| | g650
MSKLKTIALTASGLSVCPGFLYAQNTSSHQVGLAIMRLNSSILDLPPTKQYFQSGSLWDE 10 20
30 40 50 60 70 80 90 100 110 120 m650.pep
LRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYHIANEVKKRNMPAEAALLP
|||||||||||||||||||||||||:|||:||:||||||||||||||||||||||||||| g650
LRQGFRMGEVNPELVRRHESKFIASRSYFDRVVNRSRPYMYHIANEVKKRNMPAEAALLP 70 80
90 100 110 120 130 140 150 160 170 180 m650.pep
FIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDGRHDVYAATDAALNYLQYLYG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g650
FIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDGRHDVYAATDAALNYLQYLYG 130
140 150 160 170 180 190 200 210 220 230 240 m650.pep
LFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENLRMPNETRNYVPKLLAVRNIIAT
||||||||||||||||||||||:|||| |||||||||||||||||||||||||||||||| g650
LFGDWPLAFAAYNWGEGNVGRAVNRARDQGLEPTYENLRMPNETRNYVPKLLAVRNIIAT 190
200 210 220 230 240 250 260 270 280 290 300 m650.pep
PQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAGITQSELLALNPAFNVPAFIPKSKR
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||:|| g650
PQSFGMNISDIDNKPYFQAVEPGRPLDNEAIARLAGITQSELLALNPAFNVPAFIPKNKR 250
260 270 280 290 300 310 320 330 340 350 360 m650.pep
KLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAAKTSLSDISTATGMSIADIKRLNNLNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g650
KLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAAKTSLSDISTATGMSIADIKRLNNLNG 310
320 330 340 350 360 370 380 390 400 410 420 m650.pep
NLVNAGRSILVAKNGKTLQTASESVVSIDIDNTPDTYRSNMPAGTVNVGIARIRPAAAQT
||||||||||||||||||:|||||||||||||||||||||||||||||:||||:|||||| g650
NLVNAGRSILVAKNGKTLHTASESVVSIDIDNTPDTYRSNMPAGTVNVSIARIQPAAAQT 370
380 390 400 410 420 430 440 450 460 m650.pep
ADITVAPLPQKTVRTXTRSPCPYCRTCPCDSRSATSNRKTDRHAVX ||||||||||:||||
||||||: || |||||||||||||| |||| g650
ADITVAPLPQETVRTGTRSPCPHYRTRPCDSRSATSNRKTDCHAVX 430 440 450 460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2103>:
TABLE-US-02493 a650.seq 1 ATGTCCAAAC TCAAAACCAT CGCCCTGACC
GCGTCAGGTC TGTCCGTTTG 51 TCCGGGTTTC CTATACGCCC AAAACACCTC
ATCACACCAA ATCGGTTTGG 101 CGATTATGCG CTTAAACTCT TCAATACTCG
ACCTGCCACC GACAAAACAA 151 TATTTCCAAT CCGGCAGCCT GTGGAGCGAG
CTGCGCCAAG GCTTCCGGAT 201 GGGCGAAGTC AATCCCGAAC TGGTACGCCG
CCACGAAAGC AAATTCATCG 251 CAAGCCACAG CTATTTCAAC AGGGTCATCA
ACCGGAGTAG ACCCTATATG 301 TACCATATCG CCAACGAAGT CAAAAAACGC
AATATGCCCG CCGAAGCCGC 351 CCTGCTTCCC TTCATCGAAA GCGCGTTCGT
CACCAAAGCC AAATCACACG 401 TCGGCGCATC GGGCCTGTGG CAGTTCATGC
CCGCTACCGG CAGGCATTAC 451 GGCCTGGAAA AAACACCGGT TTACGACGGC
AGGCACGACA TTTACGCCGC 501 CACCGATGCC GCACTCAACT ATCTGCAATA
CCTCTATGGA CTGTTCGGCG 551 ACTGGCCGCT CGCCTTTGCC GCCTACAACT
GGGGTGAAGG CAACGTCGGA 601 CGCGCCATCA ACCGCGCCCG CGCCCAAGGG
CTCGAACCGA CCTACGAAAA 651 CCTGCGTATG CCCAACGAAA CGCGCAACTA
TGTTCCCAAG CTGCTCGCCG 701 TGCGCAACAT CATTGCCGCC CCCCAATCTT
TCGGCATGAA TATCAGCGAC 751 ATAGACAACA AACCGTATTT TCAGGCAGTC
GAACCGGACC GTCCGCTCGA 801 CAACGAAGCC ATCGCCCGGC TTGCCGGCAT
CACGCAAAGC GAGCTGCTCG 851 CCCTAAACCC CGCATTCAAC GTCCCCGCGT
TCATCCCCAA AAGCAAACGC 901 AAACTGCTGC TTCCTGTCGC GTCCGTACAA
ACCTTCCAAA GCAACTACCT 951 CAACGCCGCA CCCGACAGCC TGTTTTCATG
GGAAGTCTAT ACGCCTGCCG 1001 CCAAAACCAG CTTGTCCGAC ATCTCGACGG
CAACCGGCAT GAGCATTGCC 1051 GACATCAAAC GCCTCAACAA CCTGAACGGC
AACCTTGTCA ACGCAGGACG 1101 CAGCATCCTT GTCGCCAAGA ACGGCAAAAC
CCTTCAGACG GCATCGGAAT 1151 CCGTCGTTTC CATCGACATC GACAATACGC
CCAACACCTA CCGTTCCAAT 1201 ATGCCGGCAG GCACGGTGAA CGTCGGCATT
GCCCGAATCC GACCCGCCGC 1251 CGCACAGACA GCGGACATTA CCGTCGCACC
TTTGCCGCAG AAAACCGTCC 1301 GTACGG.AAC CCGATCCCCT TGTCCGTATT
GCCGAACCTG CCCTTGCGAC 1351 AGCCGCAGCG CAACCTCAAA CCGAAAAACA
GACCGCCATG CCGTCTGA
This corresponds to the amino acid sequence <SEQ ID 2104; ORF
650.a>:
TABLE-US-02494 a650.pep 1 MSKLKTIALT ASGLSVCPGF LYAQNTSSHQ
IGLAIMRLNS SILDLPPTKQ 51 YFQSGSLWSE LRQGFRMGEV NPELVRRHES
KFIASHSYFN RVINRSRPYM 101 YHIANEVKKR NMPAEAALLP FIESAFVTKA
KSHVGASGLW QFMPATGRHY 151 GLEKTPVYDG RHDIYAATDA ALNYLQYLYG
LFGDWPLAFA AYNWGEGNVG 201 RAINRARAQG LEPTYENLRM PNETRNYVPK
LLAVRNIIAA PQSFGMNISD 251 IDNKPYFQAV EPDRPLDNEA IARLAGITQS
ELLALNPAFN VPAFIPKSKR 301 KLLLPVASVQ TFQSNYLNAA PDSLFSWEVY
TPAAKTSLSD ISTATGMSIA 351 DIKRLNNLNG NLVNAGRSIL VAKNGKTLQT
ASESVVSIDI DNTPNTYRSN 401 MPAGTVNVGI ARIRPAAAQT ADITVAPLPQ
KTVRTXTRSP CPYCRTCPCD 451 SRSATSNRKT DRHAV* m650/a650 99.1%
identity in 465 aa overlap 10 20 30 40 50 60 m650.pep
MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILDLPPTKQYFQSGSLWGE
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a650
MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILDLPPTKQYFQSGSLWSE 10 20
30 40 50 60 70 80 90 100 110 120 m650.pep
LRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYHIANEVKKRNMPAEAALLP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a650
LRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYHIANEVKKRNMPAEAALLP 70 80
90 100 110 120 130 140 150 160 170 180 m650.pep
FIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDGRHDVYAATDAALNYLQYLYG
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| a650
FIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDGRHDIYAATDAALNYLQYLYG 130
140 150 160 170 180 190 200 210 220 230 240 m650.pep
LFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENLRMPNETRNYVPKLLAVRNIIAT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a650
LFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENLRMPNETRNYVPKLLAVRNIIAA 190
200 210 220 230 240 250 260 270 280 290 300 m650.pep
PQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAGITQSELLALNPAFNVPAFIPKSKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a650
PQSFGMNISDIDNKPYFQAVEPDRPLDNEATARLAGITQSELLALNPAFNVPAFIPKSKR 250
260 270 280 290 300 310 320 330 340 350 360 m650.pep
KLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAAKTSLSDISTATGMSIADIKRLNNLNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a650
KLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAAKTSLSDISTATGMSIADIKRLNNLNG 310
320 330 340 350 360 370 380 390 400 410 420 m650.pep
NLVNAGRSILVAKNGKTLQTASESVVSIDIDNTPDTYRSNMPAGTVNVGIARIRPAAAQT
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| a650
NLVNAGRSILVAKNGKTLQTASESVVSIDIDNTPNTYRSNMPAGTVNVGIARIRPAAAQT 370
380 390 400 410 420 430 440 450 460 m650.pep
ADITVAPLPQKTVRTXTRSPCPYCRTCPCDSRSATSNRKTDRHAVX
|||||||||||||||||||||||||||||||||||||||||||||| a650
ADITVAPLPQKTVRTXTRSPCPYCRTCPCDSRSATSNRKTDRHAVX 430 440 450 460
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2105>:
TABLE-US-02495 g652.seq 1 ATGATCGAAT TGGACGGTAC TGAAAACAAA
GGCAATTTGG GTGCGAATGC 51 GACTTTGGCG GTCTCTATGG CGGTTGCACG
CGCCGCTGCC GAAGACTCAG 101 GCCTGCCGCT TTACCGCTAC TTGGGGGGCG
CAGGTCCGAT GTCCCTGCCC 151 GTACCGATGA TGAACGTCAT CAACGGCGGC
GAACACGCCA ACAACAGCCT 201 GAACATCCAA GAGTTTATGA TTATGCCCGT
CGGCGCAAAA TCTTTCCGCG 251 AAGCGTTGCG CTGCGGTGCG GAAATTTTCC
ACGCCTTGAA AAAACTGTGC 301 GACAGTAAAG GCTTCCCGAC CACAGTCGGC
GACGAAGGCG GTTTCGCCCC 351 CAACCTGAAC AGCCACAAAG AAGCCCTGCA
ACTGATGGTC GAAGCGGCCG 401 AAGCCGCCGG CTACAAGGCG GGCGAAGACG
TATTATTCGC ATTGGACTGC 451 GCGTCCAGCG AGTTCTACAA AGACGGCAAA
TACCACTTGG AAGCCGAAGG 501 CCGCTCCTAC ACCAACGCGG AATTTGCCGA
ATACTTGGAA GGCTTGGTTA 551 ACGAATTCCC GATTATTTCC ATTGAAGACG
GGATGGACGA AAACGACTGG 601 GAAGGCTGGA AACTGCTGAC CGAAAAATTG
GGCAAAAAAG TTCAATTGGT 651 CGGCGACGAC TTGTTCGTAA CCAATCCGAA
AATTCTTGCC GAAGGCATCG 701 AAAAAGGCGT AGCAAACGCA TTGCTGGTCA
AAGTCAACCA AATCGGTACT 751 TTAAGCGAAA CCCTGAAAGc cgtcgatctg
gCAAAATGCA accgctacGc 801 cagCGTGATG AGCCAccgct ccggCGAAAC
CGAAGACAGT Accattgccg 851 ACTTGGCAGT CGCCACCAAC TGTATGCAGA
TTAAAAccgG TTCTTTGAGc 901 cgTTCCGACC GCATGGCGAA ATACAACCAa
ctGCTGCGTA TCGAGGAAGA 951 ATTGGCGGAA GCcgcctACT ACCCCGGCAA
AGCCGCATTC TACCAACTGG 1001 GCAAATAA
This corresponds to the amino acid sequence <SEQ ID 2106; ORF
652.ng>:
TABLE-US-02496 g652.pep 1 MIELDGTENK GNLGANATLA VSMAVARAAA
EDSGLPLYRY LGGAGPMSLP 51 VPMMNVINGG EHANNSLNIQ EFMIMPVGAK
SFREALRCGA EIFHALKKLC 101 DSKGFPTTVG DEGGFAPNLN SHKEALQLMV
EAAEAAGYKA GEDVLFALDC 151 ASSEFYKDGK YHLEAEGRSY TNAEFAEYLE
GLVNEFPIIS IEDGMDENDW 201 EGWKLLTEKL GKKVQLVGDD LFVTNPKILA
EGIEKGVANA LLVKVNQIGT 251 LSETLKAVDL AKCNRYASVM SHRSGETEDS
TIADLAVATN CMQIKTGSLS 301 RSDRMAKYNQ LLRIEEELAE AAYYPGKAAF
YQLGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2107>:
TABLE-US-02497 m652.seq 1 ATGATCGAAT TGGACGGTAC TGAAAACAAA
GGCAATTTGG GTGCGAATGC 51 GACTTTGGCG GTTTCTATGG CGGTTGCACG
CGCCGCTGCC GAAGACTCAG 101 GCCTGCCGCT TTACCGCTAC TTGGGCGGCG
CAGGCCCGAT GTCCCTGCCC 151 GTACCGATGA TGAACGTCAT CAACGGCGGC
GAACACGCCA ACAACAGCCT 201 GAACATCCAA GAGTTTATGA TTATGCCCGT
CGGCGCAAAA TCTTTCCGCG 251 AAGCGTTGCG CTGCGGTGCG GAAATTTTCC
ACGCCTTGAA AAAACTGTGC 301 GACAGCAAAG GCTTCCCGAC CACAGTCGGC
GACGAAGGCG GTTTCGCCCC 351 CAACCTGAAC AGCCACAAAG AAGCCCTGCA
ACTGATGGTC GAGGCGACCG 401 AAGCCGCCGG CTACAAAGCG GGCGAAGACG
TATTATTCGC ATTGGACTGC 451 GCCTCCAGCG AGTTCTACAA AGACGGCAAA
TACCACTTGG AAGCCGAAGG 501 CCGCTCCTAC ACCAACGCGG AATTTGCCGA
ATATCTGGAA GGCCTGGTCA 551 ACGAGTTCCC CATCATCTCC ATCGAAGACG
GCATGGATGA AAACGACTGG 601 GAAGGCTGGA AACTGCTGAC CGAAAAACTG
GGCGGTAGAG TTCAATTGGT 651 TGGCGACGAC TTGTTCGTAA CCAATCCAAA
AATCTTGGCC GAAGGCATCG 701 AAAAAGGCGT AGCAAACGCA TTGCTGGTCA
AAGTCAATCA AATCGGTACT 751 TTGAGCGAGA CCCTGAAAGC CGTCGACTTA
GCCAAACGCA ACCGCTACGC 801 CAGCGTAATG AGCCACCGCT CCGGCGAAAC
CGAAGACAGC ACCATTGCCG 851 ACTTGGCAGT CGCCACCAAC TGTATGCAGA
TCAAAACCGG TTCTTTGAGC 901 CGTTCCGACC GCATGGCGAA ATACAACCAA
CTGCTGCGTA TCGAGGAAGA 951 ATTGGCGGAA GCCGCCGACT ACCCCAGCAA
AGCCGCATTC TACCAACTGG 1001 GCAAATAA
This corresponds to the amino acid sequence <SEQ ID 2108; ORF
652>:
TABLE-US-02498 m652.pep 1 MIELDGTENK GNLGANATLA VSMAVARAAA
EDSGLPLYRY LGGAGPMSLP 51 VPMMNVINGG EHANNSLNIQ EFMIMPVGAK
SFREALRCGA EIFHALKKLC 101 DSKGFPTTVG DEGGFAPNLN SHKEALQLMV
EATEAAGYKA GEDVLFALDC 151 ASSEFYKDGK YHLEAEGRSY TNAEFAEYLE
GLVNEFPIIS IEDGMDENDW 201 EGWKLLTEKL GGRVQLVGDD LFVTNPKILA
EGIEKGVANA LLVKVNQIGT 251 LSETLKAVDL AKRNRYASVM SHRSGETEDS
TIADLAVATN CMQIKTGSLS 301 RSDRMAKYNQ LLRIEEELAE AADYPSKAAF YQLGK*
m652/g652 98.2% identity in 335 aa overlap 10 20 30 40 50 60
m652.pep
MIELDGTENKGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652
MIELDGTENKGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGG 10 20
30 40 50 60 70 80 90 100 110 120 m652.pep
EHANNSLNIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652
EHANNSLNIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLN 70 80
90 100 110 120 130 140 150 160 170 180 m652.pep
SHKEALQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLE
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| g652
SHKEALQLMVEAAEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLE 130
140 150 160 170 180 190 200 210 220 230 240 m652.pep
GLVNEFPIISIEDGMDENDWEGWKLLTEKLGGRVQLVGDDLFVTNPKILAEGIEKGVANA
||||||||||||||||||||||||||||||| :||||||||||||||||||||||||||| g652
GLVNEFPIISIEDGMDENDWEGWKLLTEKLGKKVQLVGDDLFVTNPKILAEGIEKGVANA 190
200 210 220 230 240 250 260 270 280 290 300 m652.pep
LLVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSLS
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| g652
LLVKVNQIGTLSETLKAVDLAKCNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSLS 250
260 270 280 290 300 310 320 330 m652.pep
RSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGKX ||||||||||||||||||||||
||:|||||||||| g652 RSDRMAKYNQLLRIEEELAEAAYYPGKAAFYQLGKX 310 320
330
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2109>:
TABLE-US-02499 a652.seq 1 ATGATCGAAT TGGACGGTAC TGAAAACAAA
GGCAATTTGG GTGCGAATGC 51 GACTTTGGCG GTTTCTATGG CGGTTGCACG
CGCCGCTGCC GAAGACTCAG 101 GCCTGCCGCT TTACCGCTAC TTGGGCGGCG
CAGGCCCGAT GTCCCTGCCC 151 GTACCGATGA TGAACGTCAT CAACGGCGGC
GAACACGCCA ACAACAGCCT 201 GAACATCCAA GAGTTTATGA TTATGCCCGT
CGGCGCAAAA TCTTTCCGCG 251 AAGCGTTGCG CTGCGGTGCG GAAATTTTCC
ACGCCTTGAA AAAACTGTGC 301 GACAGCAAAG GCTTCCCGAC CACAGTCGGC
GACGAAGGCG GTTTCGCCCC 351 CAACCTGAAC AGCCACAAAG AAGCCCTGCA
ACTGATGGTC GAGGCGACCG 401 AAGCCGCCGG CTACAAAGCG GGCGAAGACG
TATTATTCGC ATTGGACTGC 451 GCGTCCAGCG AGTTCTACAA AGACGGCAAA
TACCACTTGG AAGCCGAAGG 501 CCGCTCCTAC ACCAACGCGG AATTTGCCGA
ATATCTGGAA GGCCTGGTCA 551 ACGAGTTCCC CATCATCTCC ATCGAAGACG
GGATGGATGA AAACGACTGG 601 GAAGGCTGGA AACTGCTGAC CGAAAAACTG
GGCGGCAAAG TCCAACTCGT 651 TGGCGACGAC CTCTTCGTTA CCAACCCGAA
AATCCTTGCC GAAGGCATTG 701 AAAAAGGCGT GGCAAACGCA CTATTGGTCA
AAGTCAACCA AATCGGTACT 751 TTGAGTGAAA CCCTGAAAGC CGTCGACTTA
GCCAAACGCA ACCGCTACGC 801 CAGCGTAATG AGCCACCGCT CCGGCGAAAC
CGAAGACAGC ACCATTGCCG 851 ACTTGGCAGT CGCCACCAAC TGTATGCAGA
TCAAAACCGG TTCTTTGAGC 901 CGTTCCGACC GCATGGCGAA ATACAACCAA
CTGCTGCGTA TCGAGGAAGA 951 ATTGGCGGAA GCCGCCGACT ACCCCAGCAA
AGCCGCATTC TACCAACTGG 1001 GCAAATAA
This corresponds to the amino acid sequence <SEQ ID 2110; ORF
652.a>:
TABLE-US-02500 a652.pep 1 MIELDGTENK GNLGANATLA VSMAVARAAA
EDSGLPLYRY LGGAGPMSLP 51 VPMMNVINGG EHANNSLNIQ EFMIMPVGAK
SFREALRCGA EIFHALKKLC 101 DSKGFPTTVG DEGGFAPNLN SHKEALQLMV
EATEAAGYKA GEDVLFALDC 151 ASSEFYKDGK YHLEAEGRSY TNAEFAEYLE
GLVNEFPIIS IEDGMDENDW 201 EGWKLLTEKL GGKVQLVGDD LFVTNPKILA
EGIEKGVANA LLVKVNQIGT 251 LSETLKAVDL AKRNRYASVM SHRSGETEDS
TIADLAVATN CMQIKTGSLS 301 RSDRMAKYNQ LLRIEEELAE AADYPSKAAF YQLGK*
m652/a652 99.7% identity in 335 aa overlap 10 20 30 40 50 60
m652.pep
MIELDGTENKGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652
MIELDGTENKGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGG 10 20
30 40 50 60 70 80 90 100 110 120 m652.pep
EHANNSLNIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652
EHANNSLNIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLN 70 80
90 100 110 120 130 140 150 160 170 180 m652.pep
SHKEALQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652
SHKEALQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLE 130
140 150 160 170 180 190 200 210 220 230 240 m652.pep
GLVNEFPIISIEDGMDENDWEGWKLLTEKLGGRVQLVGDDLFVTNPKILAEGIEKGVANA
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| a652
GLVNEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANA 190
200 210 220 230 240 250 260 270 280 290 300 m652.pep
LLVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSLS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652
LLVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSLS 250
260 270 280 290 300 310 320 330 m652.pep
RSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGKX
|||||||||||||||||||||||||||||||||||| a652 RSDRMAKYNQ LLRIEEELAE
AADYPSKAAFYQLGKX 310 320 330
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2111>:
TABLE-US-02501 g652-1.seq 1 ATGAGCGCAA TCGTTGATAT TTTCGCCCGC
GAAATTTTGG ACTCACGCGG 51 CAACCCCACA GTCGAGTGTG ATGTATTGCT
CGAATCCGGC GTAATGGGAC 101 GTGCGGCCGT ACCGAGCGGC GCATCCACCG
GTCAGAAAGA AGCTTTGGAA 151 CTTCGCGACG GCGACAAATC CCGCTATTCC
GGCAAAGGCG TATTGAAGGC 201 CGTCGAACAC GTCAACAACC AAATCGCCCA
AGCCCTCATC GGTATCGATG 251 CCAACGAGCA ATCTTATATC GACCAAATCA
TGATCGAATT GGACGGTACT 301 GAAAACAAAG GCAATTTGGG TGCGAATGCG
ACTTTGGCGG TCTCTATGGC 351 GGTTGCACGC GCCGCTGCCG AAGACTCAGG
CCTGCCGCTT TACCGCTACT 401 TGGGGGGCGC AGGTCCGATG TCCCTGCCCG
TACCGATGAT GAACGTCATC 451 AACGGCGGCG AACACGCCAA CAACAGCCTG
AACATCCAAG AGTTTATGAT 501 TATGCCCGTC GGCGCAAAAT CTTTCCGCGA
AGCGTTGCGC TGCGGTGCGG 551 AAATTTTCCA CGCCTTGAAA AAACTGTGCG
ACAGTAAAGG CTTCCCGACC 601 ACAGTCGGCG ACGAAGGCGG TTTCGCCCCC
AACCTGAACA GCCACAAAGA 651 AGCCCTGCAA CTGATGGTCG AAGCGGCCGA
AGCCGCCGGC TACAAGGCGG 701 GCGAAGACGT ATTATTCGCA TTGGACTGCG
CGTCCAGCGA GTTCTACAAA 751 GACGGCAAAT ACCACTTGGA AGCCGAAGGC
CGCTCCTACA CCAACGCGGA 801 ATTTGCCGAA TACTTGGAAG GCTTGGTTAA
CGAATTCCCG ATTATTTCCA 851 TTGAAGACGG GATGGACGAA AACGACTGGG
AAGGCTGGAA ACTGCTGACC 901 GAAAAATTGG GCAAAAAAGT TCAATTGGTC
GGCGACGACT TGTTCGTAAC 951 CAATCCGAAA ATTCTTGCCG AAGGCATCGA
AAAAGGCGTA GCAAACGCAT 1001 TGCTGGTCAA AGTCAACCAA ATCGGTACTT
TAAGCGAAAC CCTGAAAGCC 1051 GTCGATCTGG CAAAATGCAA CCGCTACGCC
AGCGTGATGA GCCACCGCTC 1101 CGGCGAAACC GAAGACAGTA CCATTGCCGA
CTTGGCAGTC GCCACCAACT 1151 GTATGCAGAT TAAAACCGGT TCTTTGAGCC
GTTCCGACCG CATGGCGAAA 1201 TACAACCAAC TGCTGCGTAT CGAGGAAGAA
TTGGCGGAAG CCGCCTACTA 1251 CCCCGGCAAA GCCGCATTCT ACCAACTGGG
CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2112; ORF
652-1.ng>:
TABLE-US-02502 g652-1.pep 1 MSAIVDIFAR EILDSRGNPT VECDVLLESG
VMGRAAVPSG ASTGQKEALE 51 LRDGDKSRYS GKGVLKAVEH VNNQIAQALI
GIDANEQSYI DQIMIELDGT 101 ENKGNLGANA TLAVSMAVAR AAAEDSGLPL
YRYLGGAGPM SLPVPMMNVI 151 NGGEHANNSL NIQEFMIMPV GAKSFREALR
CGAEIFHALK KLCDSKGFPT 201 TVGDEGGFAP NLNSHKEALQ LMVEAAEAAG
YKAGEDVLFA LDCASSEFYK 251 DGKYHLEAEG RSYTNAEFAE YLEGLVNEFP
IISIEDGMDE NDWEGWKLLT 301 EKLGKKVQLV GDDLFVTNPK ILAEGIEKGV
ANALLVKVNQ IGTLSETLKA 351 VDLAKCNRYA SVMSHRSGET EDSTIADLAV
ATNCMQIKTG SLSRSDRMAK 401 YNQLLRIEEE LAEAAYYPGK AAFYQLGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2113>:
TABLE-US-02503 m652-1.seq 1 ATGAGCGCAA TCGTTGATAT TTTCGCCCGC
GAAATTTTGG ACTCACGCGG 51 CAACCCCACA GTCGAGTGTG ATGTATTGCT
CGAATCCGGC GTAATGGGAC 101 GCGCAGCCGT ACCGAGCGGC GCGTCCACCG
GTCAAAAAGA GGCTTTGGAA 151 CTTCGCGACG GCGACAAATC CCGTTATTCG
GGCAAGGGCG TATTGAAGGC 201 GGTCGAACAC GTCAACAACC AAATCGCCCA
AGCCCTCATT GGTATCGATG 251 CCAACGAGCA ATCTTATATC GACCAAATCA
TGATCGAATT GGACGGTACT 301 GAAAACAAAG GCAATTTGGG TGCGAATGCG
ACTTTGGCGG TTTCTATGGC 351 GGTTGCACGC GCCGCTGCCG AAGACTCAGG
CCTGCCGCTT TACCGCTACT 401 TGGGCGGCGC AGGCCCGATG TCCCTGCCCG
TACCGATGAT GAACGTCATC 451 AACGGCGGCG AACACGCCAA CAACAGCCTG
AACATCCAAG AGTTTATGAT 501 TATGCCCGTC GGCGCAAAAT CTTTCCGCGA
AGCGTTGCGC TGCGGTGCGG 551 AAATTTTCCA CGCCTTGAAA AAACTGTGCG
ACAGCAAAGG CTTCCCGACC 601 ACAGTCGGCG ACGAAGGCGG TTTCGCCCCC
AACCTGAACA GCCACAAAGA 651 AGCCCTGCAA CTGATGGTCG AGGCGACCGA
AGCCGCCGGC TACAAAGCGG 701 GCGAAGACGT ATTATTCGCA TTGGACTGCG
CCTCCAGCGA GTTCTACAAA 751 GACGGCAAAT ACCACTTGGA AGCCGAAGGC
CGCTCCTACA CCAACGCGGA 801 ATTTGCCGAA TATCTGGAAG GCCTGGTCAA
CGAGTTCCCC ATCATCTCCA 851 TCGAAGACGG CATGGATGAA AACGACTGGG
AAGGCTGGAA ACTGCTGACC 901 GAAAAACTGG GCGGTAGAGT TCAATTGGTT
GGCGACGACT TGTTCGTAAC 951 CAATCCAAAA ATCTTGGCCG AAGGCATCGA
AAAAGGCGTA GCAAACGCAT 1001 TGCTGGTCAA AGTCAATCAA ATCGGTACTT
TGAGCGAGAC CCTGAAAGCC 1051 GTCGACTTAG CCAAACGCAA CCGCTACGCC
AGCGTAATGA GCCACCGCTC 1101 CGGCGAAACC GAAGACAGCA CCATTGCCGA
CTTGGCAGTC GCCACCAACT 1151 GTATGCAGAT CAAAACCGGT TCTTTGAGCC
GTTCCGACCG CATGGCGAAA 1201 TACAACCAAC TGCTGCGTAT CGAGGAAGAA
TTGGCGGAAG CCGCCGACTA 1251 CCCCAGCAAA GCCGCATTCT ACCAACTGGG
CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2114; ORF
652-1>:
TABLE-US-02504 m652-1.pep 1 MSAIVDIFAR EILDSRGNPT VECDVLLESG
VMGRAAVPSG ASTGQKEALE 51 LRDGDKSRYS GKGVLKAVEH VNNQIAQALI
GIDANEQSYI DQIMIELDGT 101 ENKGNLGANA TLAVSMAVAR AAAEDSGLPL
YRYLGGAGPM SLPVPMMNVI 151 NGGEHANNSL NIQEFMIMPV GAKSFREALR
CGAEIFHALK KLCDSKGFPT 201 TVGDEGGFAP NLNSHKEALQ LMVEATEAAG
YKAGEDVLFA LDCASSEFYK 251 DGKYHLEAEG RSYTNAEFAE YLEGLVNEFP
IISIEDGMDE NDWEGWKLLT 301 EKLGGRVQLV GDDLFVTNPK ILAEGIEKGV
ANALLVKVNQ IGTLSETLKA 351 VDLAKRNRYA SVMSHRSGET EDSTIADLAV
ATNCMQIKTG SLSRSDRMAK 401 YNQLLRIEEE LAEAADYPSK AAFYQLGK*
m652-1/g652-1 98.6% identity in 428 aa overlap 10 20 30 40 50 60
m652-1 MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652-1
MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYS 10 20
30 40 50 60 70 80 90 100 110 120 m652-1
GKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTENKGNLGANATLAVSMAVAR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652-1
GKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTENKGNLGANATLAVSMAVAR 70 80
90 100 110 120 130 140 150 160 170 180 m652-1
AAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652-1
AAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR 130
140 150 160 170 180 190 200 210 220 230 240 m652-1
CGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEALQLMVEATEAAGYKAGEDVLFA
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| g652-1
CGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEALQLMVEAAEAAGYKAGEDVLFA 190
200 210 220 230 240 250 260 270 280 290 300 m652-1
LDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLVNEFPIISIEDGMDENDWEGWKLLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g652-1
LDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLVNEFPIISIEDGMDENDWEGWKLLT 250
260 270 280 290 300 310 320 330 340 350 360 m652-1
EKLGGRVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLKAVDLAKRNRYA ||||
:||||||||||||||||||||||||||||||||||||||||||||||||| |||| g652-1
EKLGKKVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLKAVDLAKCNRYA 310
320 330 340 350 360 370 380 390 400 410 420 m652-1
SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAADYPSK
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||:| g652-1
SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAAYYPGK 370
380 390 400 410 420 429 m652-1 AAFYQLGKX ||||||||| g652-1
AAFYQLGKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2115>:
TABLE-US-02505 a652-1.seq 1 ATGAGCGCAA TCGTTGATAT TTTCGCCCGC
GAAATTTTGG ACTCACGCGG 51 CAACCCCACA GTCGAGTGTG ATGTATTGCT
CGAATCCGGC GTAATGGGAC 101 GCGCAGCCGT ACCGAGCGGC GCGTCCACCG
GTCAAAAAGA GGCTTTGGAA 151 CTTCGCGACG GCGACAAATC CCGTTATTCG
GGCAAGGGCG TATTGAAGGC 201 GGTCGAACAC GTCAACAACC AAATCGCCCA
AGCCCTCATT GGTATCGATG 251 CCAACGAGCA ATCTTATATC GACCAAATCA
TGATCGAATT GGACGGTACT 301 GAAAACAAAG GCAATTTGGG TGCGAATGCG
ACTTTGGCGG TTTCTATGGC 351 GGTTGCACGC GCCGCTGCCG AAGACTCAGG
CCTGCCGCTT TACCGCTACT 401 TGGGCGGCGC AGGCCCGATG TCCCTGCCCG
TACCGATGAT GAACGTCATC 451 AACGGCGGCG AACACGCCAA CAACAGCCTG
AACATCCAAG AGTTTATGAT 501 TATGCCCGTC GGCGCAAAAT CTTTCCGCGA
AGCGTTGCGC TGCGGTGCGG 551 AAATTTTCCA CGCCTTGAAA AAACTGTGCG
ACAGCAAAGG CTTCCCGACC 601 ACAGTCGGCG ACGAAGGCGG TTTCGCCCCC
AACCTGAACA GCCACAAAGA 651 AGCCCTGCAA CTGATGGTCG AGGCGACCGA
AGCCGCCGGC TACAAAGCGG 701 GCGAAGACGT ATTATTCGCA TTGGACTGCG
CGTCCAGCGA GTTCTACAAA 751 GACGGCAAAT ACCACTTGGA AGCCGAAGGC
CGCTCCTACA CCAACGCGGA 801 ATTTGCCGAA TATCTGGAAG GCCTGGTCAA
CGAGTTCCCC ATCATCTCCA 851 TCGAAGACGG GATGGATGAA AACGACTGGG
AAGGCTGGAA ACTGCTGACC 901 GAAAAACTGG GCGGCAAAGT CCAACTCGTT
GGCGACGACC TCTTCGTTAC 951 CAACCCGAAA ATCCTTGCCG AAGGCATTGA
AAAAGGCGTG GCAAACGCAC 1001 TATTGGTCAA AGTCAACCAA ATCGGTACTT
TGAGTGAAAC CCTGAAAGCC 1051 GTCGACTTAG CCAAACGCAA CCGCTACGCC
AGCGTAATGA GCCACCGCTC 1101 CGGCGAAACC GAAGACAGCA CCATTGCCGA
CTTGGCAGTC GCCACCAACT 1151 GTATGCAGAT CAAAACCGGT TCTTTGAGCC
GTTCCGACCG CATGGCGAAA 1201 TACAACCAAC TGCTGCGTAT CGAGGAAGAA
TTGGCGGAAG CCGCCGACTA 1251 CCCCAGCAAA GCCGCATTCT ACCAACTGGG
CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2116; ORF
652-1.a>:
TABLE-US-02506 a652-1.pep 1 MSAIVDIFAR EILDSRGNPT VECDVLLESG
VMGRAAVPSG ASTGQKEALE 51 LRDGDKSRYS GKGVLKAVEH VNNQIAQALI
GIDANEQSYI DQIMIELDGT 101 ENKGNLGANA TLAVSMAVAR AAAEDSGLPL
YRYLGGAGPM SLPVPMMNVI 151 NGGEHANNSL NIQEFMIMPV GAKSFREALR
CGAEIFHALK KLCDSKGFPT 201 TVGDEGGFAP NLNSHKEALQ LMVEATEAAG
YKAGEDVLFA LDCASSEFYK 251 DGKYHLEAEG RSYTNAEFAE YLEGLVNEFP
IISIEDGMDE NDWEGWKLLT 301 EKLGGKVQLV GDDLFVTNPK ILAEGIEKGV
ANALLVKVNQ IGTLSETLKA 351 VDLAKRNRYA SVMSHRSGET EDSTIADLAV
ATNCMQIKTG SLSRSDRMAK 401 YNQLLRIEEE LAEAADYPSK AAFYQLGK*
m652-1/a652-1 99.8% identity in 428 aa overlap 10 20 30 40 50 60
m652-1 MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYS 10 20
30 40 50 60 70 80 90 100 110 120 m652-1
GKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTENKGNLGANATLAVSMAVAR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
GKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTENKGNLGANATLAVSMAVAR 70 80
90 100 110 120 130 140 150 160 170 180 m652-1
AAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
AAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR 130
140 150 160 170 180 190 200 210 220 230 240 m652-1
CGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEALQLMVEATEAAGYKAGEDVLFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
CGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEALQLMVEATEAAGYKAGEDVLFA 190
200 210 220 230 240 250 260 270 280 290 300 m652-1
LDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLVNEFPIISIEDGMDENDWEGWKLLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
LDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLVNEFPIISIEDGMDENDWEGWKLLT 250
260 270 280 290 300 310 320 330 340 350 360 m652-1
EKLGGRVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLKAVDLAKRNRYA
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
EKLGGKVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLKAVDLAKRNRYA 310
320 330 340 350 360 370 380 390 400 410 420 m652-1
SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAADYPSK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a652-1
SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAADYPSK 370
380 390 400 410 420 429 m652-1 AAFYQLGKX ||||||||| a652-1
AAFYQLGKX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2117>:
TABLE-US-02507 g653.seq 1 ATGGCGGcgg aaccgatgcg gAtgccggag
gtaAcgtaCG GTTTTTCCGG 51 ATCGTTCGGG ATGGCGTTTT TGTtgacggT
GATGTGCGCt ttgcccaAAG 101 CGGCTtcggc ggctttgcCg gtgaTTTTCA
TCGGTTGCAG GtcgacgaGG 151 AAaacgTGGC TTTCGGTGCG GCCGGAAacg
atgcgCaaac cgCGTttaac 201 caactcttcc gcCATGACGG CAGCATTGAT
TTTCACTTGT TTTGCGTATT 251 GTTTGAactC GGGTTGcaac gcttctTTAA
acgctACGGC TttgGCGGCG 301 ATAACGTgca tcaACGGAcc gCCTTGCAGG
CTTGGGAAGA TGGAAGAGTT 351 CAGCGCTTTT TCGTGGGTAT TGTCACGGCA
CAAAATCACA CCGCCGCGAG 401 GGCCGCGTAG GGTTTTGTGG GTGGTAGTGg
ttACgaaGTc GCAGAatggc 451 ACGGGgttag gatattcgcc gccGGCAACC
AgtccgGCAT Ag
This corresponds to the amino acid sequence <SEQ ID 2118; ORF
653.ng>:
TABLE-US-02508 g653.pep 1 MAAEPMRMPE VTYGFSGSFG MAFLLTVMCA
LPKAASAALP VIFIGCRSTR 51 KTWLSVRPET MRKPRLTNSS AMTAALIFTC
FAYCLNSGCN ASLNATALAA 101 ITCINGPPCR LGKMEEFSAF SWVLSRHKIT
PPRGPRRVLW VVVVTKSQNG 151 TGLGYSPPAT SPA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2119>:
TABLE-US-02509 m653.seq 1 ATGGCAGCGG AGCCGATGCG GATGCCGGAG
GTAACGAAGG GTTTTTCCGG 51 ATCGTTCGGA ATGGCGTTTT TGTTGACGGT
GATGTGCGCT TTGCCCAAAG 101 CGGCTTCGGC GGCTTTGCCG GTAATTTTCA
TCGGTTGCAG GTCAACGAGG 151 AAAACGTGGC TTTCGGTGCG GCCGGAAACG
ATGCGCAAAC CGCGTTTAAC 201 CAACTCTTCC GCCATGGCGG CTGCATTGAT
TTTCACTTGT TTTGCGTATT 251 GTTTGAACTC GGGTTGCAAT GCTTCTTTAA
ACGCCACGGC TTTGGCGGCG 301 ATAACGTGCA TCAGCGGACC GCCTTGCAGG
CTTGGGAAGA TGGAAGAGTT 351 CAACGCTTTT TCGTGGGTAT TGTCGCGGCA
CAAAATTACG CCGCCGCGAG 401 GACCGCGCAG GGTTTTGTGG GTGGTGGTGG
TCACGAAGTC GCAGAACGGC 451 ACCGGGTTGG GATATTCGCC GCCGGCAACC
AGACCGGCAT AG
This corresponds to the amino acid sequence <SEQ ID 2120; ORF
653>:
TABLE-US-02510 m653.pep 1 MAAEPMRMPE VTKGFSGSFG MAFLLTVMCA
LPKAASAALP VIFIGCRSTR 51 KTWLSVRPET MRKPRLTNSS AMAAALIFTC
FAYCLNSGCN ASLNATALAA 101 ITCISGPPCR LGKMEEFNAF SWVLSRHKIT
PPRGPRRVLW VVVVTKSQNG 151 TGLGYSPPAT RPA* m653/g653 96.9% identity
in 163 aa overlap 10 20 30 40 50 60 m653.pep
MAAEPMRMPEVTKGFSGSFGMAFLLTVMCALPKAASAALPVIFIGCRSTRKTWLSVRPET
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| g653
MAAEPMRMPEVTYGFSGSFGMAFLLTVMCALPKAASAALPVIFIGCRSTRKTWLSVRPET 10 20
30 40 50 60 70 80 90 100 110 120 m653.pep
MRKPRLTNSSAMAAALIFTCFAYCLNSGCNASLNATALAAITCISGPPCRLGKMEEFNAF
||||||||||||:|||||||||||||||||||||||||||||||:||||||||||||:|| a653
MRKPRLTNSSAMTAALIFTCFAYCLNSGCNASLNATALAAITCINGPPCRLGKMEEFSAF 70 80
90 100 110 120 130 140 150 160 m653.pep
SWVLSRHKITPPRGPRRVLWVVVVTKSQNGTGLGYSPPATRPAX
|||||||||||||||||||||||||||||||||||||||| ||| a653
SWVLSRHKITPPRGPRRVLWVVVVTKSQNGTGLGYSPPATSPAX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2121>:
TABLE-US-02511 a653.seq 1 ATGGCGGCGG AACCGATGCG GATGCCGGAG
GTAACGAAGG GTTTTTCCGG 51 ATCATTCGGG ATGGCGTTTT TGTTGACAGT
GATGTGCGCT TTGCCCAAAG 101 CAGCTTCGGC GGCTTTGCCG GTAATTTTCA
TCGGTTGCAG GTCAACGAGG 151 AAAACGTGGC TTTCGGTGCG GCCGGAAACG
ATGCGCAAAC CGCGTTTAAC 201 CAACTCTTCC GCCATGGCGG CTGCATTGAT
TTTCACTTGT TTTGCGTATT 251 GTTTGAACTC GGGTTGCAAT GCTTCTTTAA
ACGCCACGGC TTTGGCGGCG 301 ATAACGTGCA TCAGCGGGCC ACCTTGCAGG
CTTGGGAAGA TGGAAGAGTT 351 CAACGCTTTT TCGTGGGTAT TGTCGCGGCA
CAAAATTACG CCGCCGCGAG 401 GACCGCGCAG GGTTTTGTGG GTGGTGGTGG
TAACGAAGTC GCAGAACGGC 451 ACGGGATTGG GATATTCGCC GCCGGCAACC
AGACCGGCAT AG
This corresponds to the amino acid sequence <SEQ ID 2122; ORF
653.a>:
TABLE-US-02512 a653.pep 1 MAAEPMRMPE VTKGFSGSFG MAFLLTVMCA
LPKAASAALP VIFIGCRSTR 51 KTWLSVRPET MRKPRLTNSS AMAAALIFTC
FAYCLNSGCN ASLNATALAA 101 ITCISGPPCR LGKMEEFNAF SWVLSRHKIT
PPRGPRRVLW VVVVTKSQNG 151 TGLGYSPPAT RPA* m653/a653 100.0% identity
in 163 aa overlap 10 20 30 40 50 60 m653.pep
MAAEPMRMPEVTKGFSGSFGMAFLLTVMCALPKAASAALPVIFIGCRSTRKTWLSVRPET
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a653
MAAEPMRMPEVTKGFSGSFGMAFLLTVMCALPKAASAALPVIFIGCRSTRKTWLSVRPET 10 20
30 40 50 60 70 80 90 100 110 120 m653.pep
MRKPRLTNSSAMAAALIFTCFAYCLNSGCNASLNATALAAITCISGPPCRLGKMEEFNAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a653
MRKPRLTNSSAMAAALIFTCFAYCLNSGCNASLNATALAAITCISGPPCRLGKMEEFNAF 70 80
90 100 110 120 130 140 150 160 m653.pep
SWVLSRHKITPPRGPRRVLWVVVVTKSQNGTGLGYSPPATRPAX
|||||||||||||||||||||||||||||||||||||||||||| a653 SWVLSRHKIT
PPRGPRRVLW VVVVTKSQNG TGLGYSPPAT RPAX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2123>:
TABLE-US-02513 g656.seq 1 ATGCCGCGTT TCTCCGGTTC GATTTCTTCG
ATGATTTCCA TCGCGCGGAC 51 TTTtggcGCG CCGGAGAGTG TGCcggcagg
gAAGGTGGCG GCGAGGATGT 101 CCATATTGGT AACGCCCTCT TTCAAACAGc
ctTCGACGTT GGAAACGATG 151 TGCATCACAT GGGAGTATTT TTCAATCACC
ATTTTGTCGG TGACTTTGAC 201 TTCGCCTGTT TTGCTGATGC GTCCGACATC
GTTGCGCCCC AAATCGATAA 251 GCATAACGTG TTCGGCgatt TCTTTGGCGT
CGCTTAACAA ATCTTGTTCG 301 TTGGCAAGGT CTTCGGCGGG GGTTTTGCCG
CGCAGGCGCG TGCCGGCGAT 351 GGGGCGGACG ATGACGTcat CGCGTTCGCG
GCGGACGAGG ATTTCGGGCG 401 AGGAACCGAC GATGTGGAAA TCGCCGAAAT
CGTAG
This corresponds to the amino acid sequence <SEQ ID 2124; ORF
656.ng>:
TABLE-US-02514 g656.pep 1 MPRFSGSISS MISIARTFGA PESVPAGKVA
ARMSILVTPS FKQPSTLETM 51 CITWEYFSIT ILSVTLTSPV LLMRPTSLRP
KSISITCSAI SLASLNKSCS 101 LARSSAGVLP RRRVPAMGRT MTSSRSRRTR
ISGEEPTMWK SPKS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2125>:
TABLE-US-02515 m656.seq 1 ATGCCGCGTT TGCTCGGTTC GACTTCTTCG
ATGATTTCCA TGGCGCGGAC 51 TTTGGGTGCG CCGGAGAGTG TGCCGGCAGG
GAAGGTAGCG GCGAGGATGT 101 CCATGTTGGT CATGCCGTCT TTCAGACGGC
CTTCGACGTT GGAAACGATG 151 TGCATTACAT GGGAGTATTT TTCAATCACC
ATTTTGTCGG TAACTTTGAC 201 TTCGCCGGTT TTACTGATGC GGCCGACGTC
GTTGCGTCCT AAGTCAATCA 251 ACATGACGTG TTCGGCGATT TCTTTGGCAT
CGCTTAACAA ATCTTGTTCG 301 TTGGCAAGGT CTTCGGCGGG GGTTTTGCCG
CGCAGGCGCG TGCCGGCGAT 351 GGGGCGGACG ATAACGTCGT TGCGTTCGCG
TCGGACGAGG ATTTCGGGCG 401 AGGAGCCGAC GATGTGGAAA TCGCCGAAAT
CGTAG
This corresponds to the amino acid sequence <SEQ ID 2126; ORF
656>:
TABLE-US-02516 m656.pep 1 MPRLLGSTSS MISMARTLGA PESVPAGKVA
ARMSMLVMPS FRRPSTLETM 51 CITWEYFSIT ILSVTLTSPV LLMRPTSLRP
KSINMTCSAI SLASLNKSCS 101 LARSSAGVLP RRRVPAMGRT ITSLRSRRTR
ISGEEPTMWK SPKS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02517 m656/g656 91.0% identity in 144 aa overlap 10 20 30
40 50 60 m656.pep
MPRLLGSTSSMISMARTLGAPESVPAGKVAARMSMLVMPSFRRPSTLETMCITWEYFSIT |||:
|| |||||:|||:||||||||||||||||:|| |||::||||||||||||||||| g656
MPRFSGSISSMISIARTFGAPESVPAGKVAARMSILVTPSFKQPSTLETMCITWEYFSIT 10 20
30 40 50 60 70 80 90 100 110 120 m656.pep
ILSVTLTSPVLLMRPTSLRPKSINMTCSAISLASLNKSCSLARSSAGVLPRRRVPAMGRT
|||||||||||||||||||||||::||||||||||||||||||||||||||||||||||| g656
ILSVTLTSPVLLMRPTSLRPKSISITCSAISLASLNKSCSLARSSAGVLPRRRVPAMGRT 70 80
90 100 110 120 130 140 m656.pep ITSLRSRRTRISGEEPTMWKSPKSX :||
||||||||||||||||||||| g656 MTSSRSRRTRISGEEPTMWKSPKSX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2127>:
TABLE-US-02518 a656.seq 1 ATGCCGCGTT TGCTCGGTTC GACTTCTTCG
ATGATTTCCA TGGCGCGGAC 51 TTTGGGTGCG CCGGAGAGTG TGCCGGCAGG
GAAGGTAGCG GCGAGGATGT 101 CCATGTTGGT CATGCCGTCT TTCAGACGGC
CTTCGACGTT GGAAACGATG 151 TGCATTACAT GGGAGTATTT TTCAATCACC
ATTTTGTCGG TAACTTTGAC 201 TTCGCCGGTT TTACTGATGC GGCCGACGTC
GTTGCGTCCT AAGTCAATCA 251 ACATGACGTG TTCGGCGATT TCTTTGGCAT
CGCTTAACAA ATCTTGTTCG 301 TTGGCAAGGT CTTCGGCGGG GGTTTTGCCG
CGCAGGCGCG TGCCGGCGAT 351 GGGGCGGACG ATGACATCGT CGCGTTCGCG
GCGGACGAGG ATTTCGGGCG 401 AGGAGCCGAC GATGTGGAAA TCGCCGAAAT
CGTAG
This corresponds to the amino acid sequence <SEQ ID 2128; ORF
656.a>:
TABLE-US-02519 a656.pep 1 MPRLLGSTSS MISMARTLGA PESVPAGKVA
ARMSMLVMPS FRRPSTLETM 51 CITWEYFSIT ILSVTLTSPV LLMRPTSLRP
KSINMTCSAI SLASLNKSCS 101 LARSSAGVLP RRRVPAMGRT MTSSRSRRTR
ISGEEPTMWK SPKS* m656/a656 98.6% identity in 144 aa overlap 10 20
30 40 50 60 m656.pep
MPRLLGSTSSMISMARTLGAPESVPAGKVAARMSMLVMPSFRRPSTLETMCITWEYFSIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a656
MPRLLGSTSSMISMARTLGAPESVPAGKVAARMSMLVMPSFRRPSTLETMCITWEYFSIT 10 20
30 40 50 60 70 80 90 100 110 120 m656.pep
ILSVTLTSPVLLMRPTSLRPKSINMTCSAISLASLNKSCSLARSSAGVLPRRRVPAMGRT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a656
ILSVTLTSPVLLMRPTSLRPKSINMTCSAISLASLNKSCSLARSSAGVLPRRRVPAMGRT 70 80
90 100 110 120 130 140 m656.pep ITSLRSRRTRISGEEPTMWKSPKSX :||
||||||||||||||||||||| a656 MTSSRSRRTRISGEEPTMWKSPKSX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2129>:
TABLE-US-02520 g657.seq 1 ATGAACACAC CCCCCATCCT TCCTCCCGCC
ATGCTCGGCA TCCTCGGCGG 51 CGGACAATTa ggcagAATGT TTGCCGTTGC
CGCTAAAACC ATGGGCTACA 101 AAGTAACCGT TCTCGATCCC GACCCGAATG
CGCCGGCGGC GGAATTTGCC 151 GACCGCCATT TGTGCGCGCC GTTTGACGAC
CGGGCCGCGT TGGACGAATT 201 GGCAAAATGC GCGGCGGTta cgACCGAATT
TGAAAacgtc aaTGCCGACG 251 CGATGCGCTC TCTGGCAAAG CATACCAACG
TTTCCCCCAG CGGCGACTGC 301 GTGTCCATTG CACAAAACCG CATTCAGGAA
AAAGCGTGGA TACGCAAAGC 351 AGGCTTGCAA ACCGCGCCGT ATCAGGCGGT
TTGCAAGGCC GAAGACATTA 401 CTGAAGCAAG CGCGCAATTT TTGCCCGGCA
TCCTGAAAAC GGCTACGTTG 451 GGCTACGACG GCAAAGGTCA AATCCGCGTC
AAAACGTTGG ACGAACTCAA 501 AGCCGCGTTT GCCGAACACG GCGGCGTGGA
TTGCGTTTTG GAAAAAATGG 551 TGGACTTGCG CGGCGAGATT TCCGTGATCG
TATGCCGTCT GAACGATGAA 601 AACGTGCAAA CCTTCGACCC CGCCGAAAAC
ATCCACGAAA ACGGCATCTT 651 GGCTTattcC ATCGTCcccg CGCGGCTGAG
TGCCGACGTG CAGCAACAGG 701 CGCGGCAGAC GGCGCAACgc tTGGCGGACG
AATTGGATTA TGTCGGCgta 751 TTGGCGGTAG AAATGTTTGT TGTCGGCGAC
ACACATGAAT TGCTCGTCAA 801 TGAAACCGCC CCGCGCACGC ACAATTCCGG
CCACCATACG ATAGATGCCT 851 GCGCCGCAGA CCAGTTCCAA CAGCAGGTAC
GCATTATGTG CAAcctGCCG 901 cccGccgACA CCAAATTATT aTCCCCttgC
TGTATGGCGA ATATTTTGGg 951 CGACGTTTGG CAGGAAGATG GCGGCGAACC
GGATTGGCTG CCGTTGCAAA 1001 GCCGGCCGAA TGCACACCTG CACCTATACG
GAAAAAAAAC CGCACAGAAA 1051 GGTCGGAAAA TGGGACACTT TaccgTTTTG
ACCACCGATT CGGACaccgC 1101 ATTTCAAGAA GCAAAAAAAC TGCATCAGTC
CCTATAA
This corresponds to the amino acid sequence <SEQ ID 2130; ORF
657.ng>:
TABLE-US-02521 g657.pep 1 MNTPPILPPA MLGILGGGQL GRMFAVAAKT
MGYKVTVLDP DPNAPAAEFA 51 DRHLCAPFDD RAALDELAKC AAVTTEFENV
NADAMRSLAK HTNVSPSGDC 101 VSIAQNRIQE KAWIRKAGLQ TAPYQAVCKA
EDITEASAQF LPGILKTATL 151 GYDGKGQIRV KTLDELKAAF AEHGGVDCVL
EKMVDLRGEI SVIVCRLNDE 201 NVQTFDPAEN IHENGILAYS IVPARLSADV
QQQARQTAQR LADELDYVGV 251 LAVEMFVVGD THELLVNETA PRTHNSGHHT
IDACAADQFQ QQVRIMCNLP 301 PADTKLLSPC CMANILGDVW QEDGGEPDWL
PLQSRPNAHL HLYGKKTAQK 351 GRKMGHFTVL TTDSDTAFQE AKKLHQSL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2131>:
TABLE-US-02522 m657.seq 1 ATGAAAAACA TATCTCTTTC TCCGCCCGCC
ATGCTTGGCA TCCTCGGCGG 51 CGGACAATTA GGCAGAATGT TTACCGTTGC
CGCCAAAACC ATGGGCTACA 101 AAGTAACCGT TCTCGACCCC GATCCGGACG
CGCCGGCAGC AGAATTTGCC 151 GACCGCCATT TGTGCGCGCC GTTTAACGAC
CAAGCTGCTT TGGACGAATT 201 GGCAAAATGC GCGGCGGTGA CCACTGAATT
TGAAAACGTC AATGCCGATG 251 CGATGCGCTT TTTGGCAAAA CATACCAATG
TTTCCCCTAG CGGCGATTGT 301 GTGGCGATTG CACAAAACCG CATTCAGGAA
AAGGCATGGA TACGCAAAGC 351 GGGATTGCAA ACCGCGCCGT ATCAAGTGGT
TTGTAAGGCT GAAGACATCA 401 CTGAAGCAAG CGCGCAATTT TTGCCCGGCA
TCCTGAAAAC GGCTACGTTG 451 GGCTACGACG GCAAAGGTCA AATCCGCGTA
AAAACATTGG ATGAACTCAA 501 AGCCGCGTTT GCCGAACACG GCGGCGTGGA
TTGCGTTTTG GAAAAAATGG 551 TGGATTTGCG CAGTGAAATT TCCGTAATCG
TATGCCGTTT GAACAATGAC 601 AACGTGCAAA CTTTCGACCC TGCCGAAAAC
ATCCACGAAA ACGGCATCTT 651 GGCTTATTCC ATCGTCCCCG CGCGACTGAG
TGCCGACGTG CAGCAACAGG 701 CGCGGCAGAT GGCGCAACGC TTGGCGGACG
AATTGGATTA TGTCGGCGTA 751 TTGGCGGTAG AAATGTTTGT TGTCGGTGAC
ACGCATGAAT TGGTCGTCAA 801 CGAAATCGCC CCGCGCCCGC ACAATTCCGG
ACACCATACG ATAGATGCCT 851 GCGCAGCAGA CCAGTTCCAG CAGCAGGTAC
GCATTATGTG CAACCTGCCG 901 CCTGCCGATA CCAAATTACT GAGTTCTTGC
TGTATGGCAA ATATTTTGGG 951 CGACGTTTGG CAGGAAGACG GCGGCGAACC
GGATTGGCTG CCCTTGCAAA 1001 GCCATCCGAA TGCACACCTG CACCTTTACG
GCAAAAAAAC CGCGCACAAA 1051 GGGCGGAAAA TGGGACACTT TACCGTTTTA
ACCACCGATT CGGACACCGC 1101 ATTTCAAGAA GCAAAAAAAC TGCATCAGTC
CCTATAA
This corresponds to the amino acid sequence <SEQ ID 2132; ORF
657>:
TABLE-US-02523 m657.pep 1 MKNISLSPPA MLGILGGGQL GRMFTVAAKT
MGYKVTVLDP DPDAPAAEFA 51 DRHLCAPFND QAALDELAKC AAVTTEFENV
NADAMRFLAK HTNVSPSGDC 101 VAIAQNRIQE KAWIRKAGLQ TAPYQVVCKA
EDITEASAQF LPGILKTATL 151 GYDGKGQIRV KTLDELKAAF AEHGGVDCVL
EKMVDLRSEI SVIVCRLNND 201 NVQTFDPAEN IHENGILAYS IVPARLSADV
QQQARQMAQR LADELDYVGV 251 LAVEMFVVGD THELVVNEIA PRPHNSGHHT
IDACAADQFQ QQVRIMCNLP 301 PADTKLLSSC CMANILGDVW QEDGGEPDWL
PLQSHPNAHL HLYGKKTAHK 351 GRKMGHFTVL TTDSDTAFQE AKKLHQSL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02524 m657/g657 93.9% identity in 378 aa overlap 10 20 30
40 50 60 m657.pep
MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDAPAAEFADRHLCAPFND |:: :
|||||||||||||||||:|||||||||||||||||:|||||||||||||||:| g657
MNTPPILPPAMLGILGGGQLGRMFAVAAKTMGYKVTVLDPDPNAPAAEFADRHLCAPFDD 10 20
30 40 50 60 70 80 90 100 110 120 m657.pep
QAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ
:||||||||||||||||||||||||| ||||||||||||||:|||||||||||||||||| g657
RAALDELAKCAAVTTEFENVNADAMRSLAKHTNVSPSGDCVSIAQNRIQEKAWIRKAGLQ 70 80
90 100 110 120 130 140 150 160 170 180 m657.pep
TAPYQVVCKAEDITEASAQFLPGILKTATLGYDGKGQIRVKTLDELKAAFAEHGGVDCVL
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| g657
TAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRVKILDELKAAFAEHGGVDCVL 130
140 150 160 170 180 190 200 210 220 230 240 m657.pep
EKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILAYSIVPARLSADVQQQARQMAQR
|||||||:||||||||||::|||||||||||||||||||||||||||||||||||| ||| g657
EKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILAYSIVPARLSADVQQQARQTAQR 190
200 210 220 230 240 250 260 270 280 290 300 m657.pep
LADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNSGHHTIDACAADQFQQQVRIMCNLP
||||||||||||||||||||||||:||| ||| ||||||||||||||||||||||||||| g657
LADELDYVGVLAVEMFVVGDTHELLVNETAPRTHNSGHHTIDACAADQFQQQVRIMCNLP 250
260 270 280 290 300 310 320 330 340 350 360 m657.pep
PADTKLLSSCCMANILGDVWQEDGGEPDWLPLQSHPNAHLHLYGKKTAHKGRKMGHFTVL
|||||||| |||||||||||||||||||||||||:|||||||||||||:||||||||||| g657
PADTKLLSPCCMANILGDVWQEDGGEPDWLPLQSRPNAHLHLYGKKTAQKGRKMGHFTVL 310
320 330 340 350 360 370 379 m657.pep TTDSDTAFQEAKKLHQSLX
||||||||||||||||||| g657 TTDSDTAFQEAKKLHQSLX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2133>:
TABLE-US-02525 a657.seq 1 ATGAAAAACA TATCTCTTTC TCCGCCCGCC
ATGCTCGGCA TTCTTGGCGG 51 CGGACAATTA GGCAGAATGT TTACTGTTGC
TGCCAAAACC ATGGGCTACA 101 AAGTAACCGT ACTCGATCCC AACCCGAATG
CGCCGGCAGC GGAATTTGCC 151 GACCGCCATT TGTGTGCGCC GTTTGACAAC
CAAACCGCTT TGGAAGAATT 201 GGCAAAATGT GCGGCTGTTA CGACCGAGTT
CGAAAACGTC AATGCCGATG 251 CGATGCGTTT TCTCGCCAAA CATACCAATG
TTTCCCCCAG CGGCGACTGC 301 GTTGCCATCG CGCAAAACCG CATTCAGGAA
AAGGCATGGA TACGCAAAGC 351 AGGCCTGCAA ACCGCGCCGT ATCAAGCAAT
TTGCAAAGCC GAAGACATCA 401 CTGAAGAAAG CATACAATTT CTGCCCGGCA
TCCTGAAAAC CGCTACATTG 451 GGCTATGACG GCAAAGGCCA AATCCGCGTC
AAAACGGTGG ATGAACTCAA 501 AGCCGCGTTT GCCGAACACC GCGGCGTGGA
TTGCGTTTTG GAAAAAATGG 551 TGGACTTGCG CGGCGAAATT TCCGTTATCG
TATGCCGTCT GAACAATGAC 601 AACGTGCAAA CTTTCGATCC TGCCGAAAAC
ATTCACGAAA ACGGTATCCT 651 CGCCTACTCC ATCGTCCCAG CCCGACTGAG
TGCCGACATT CAGCAACAGG 701 CGCGACAAAT GGCGCAGCGT TTGGCCGATG
AATTGAACTA CGTCGGCGTA 751 TTGGCGGTAG AAATGTTTGT TGTCGGCGAC
ACGCATGAAT TGGTCGTCAA 801 CGAAATCGCG CCGCGTCCGC ACAATTCCGG
CCACCATACC GTCGACGCCT 851 GCGCGGCAGA CCAATTCCAG CAACAGGTCC
GCCTGATGTG CAACCTGCCA 901 CCTGCTGACA CCAAATTGCT GAGTTCTTGC
TGTATGGCGA ATATTTTGGG 951 CGACGTTTGG CAGGAAGACG GCGGCGAACC
GGATTGGTTT CCCCTGCAAA 1001 GCCGGCCGGA CGCGCACCTG CACCTTTACG
GCAAAAAAAC CGCGCACAAA 1051 GGGCGGAAAA TGGGACACTT TACCATTTTA
AGCACCGATT CGGACACCGC 1101 ATTTCAAGAA GCAAAAAAAC TGCATCAGTC
CCTATAA
This corresponds to the amino acid sequence <SEQ ID 2134; ORF
657.a>:
TABLE-US-02526 a657.pep 1 MKNISLSPPA MLGILGGGQL GRMFTVAAKT
MGYKVTVLDP NPNAPAAEFA 51 DRHLCAPFDN QTALEELAKC AAVTTEFENV
NADAMRFLAK HTNVSPSGDC 101 VAIAQNRIQE KAWIRKAGLQ TAPYQAICKA
EDITEESIQF LPGILKTATL 151 GYDGKGQIRV KTVDELKAAF AEHRGVDCVL
EKMVDLRGEI SVIVCRLNND 201 NVQTFDPAEN IHENGILAYS IVPARLSADI
QQQARQMAQR LADELNYVGV 251 LAVEMFVVGD THELVVNEIA PRPHNSGHHT
VDACAADQFQ QQVRLMCNLP 301 PADTKLLSSC CMANILGDVW QEDGGEPDWF
PLQSRPDAHL HLYGKKTAHK 351 GRKMGHFTIL STDSDTAFQE AKKLHQSL* m657/a657
94.2% identity in 378 aa overlap 10 20 30 40 50 60 m657.pep
MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDAPAAEFADRHLCAPFND
||||||||||||||||||||||||||||||||||||||||:|:|||||||||||||||:: a657
MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPNPNAPAAEFADRHLCAPFDN 10 20
30 40 50 60 70 80 90 100 110 120 m657.pep
QAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ
|:||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| a657
QTALEELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ 70 80
90 100 110 120 130 140 150 160 170 180 m657.pep
TAPYQVVCKAEDITEASAQFLPGILKTATLGYDGKGQIRVKTLDELKAAFAEHGGVDCVL
|||||::||||||| |||||||||||||||||||||||||:|||||||||| |||||| a657
TAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRVKTVDELKAAFAEHRGVDCVL 130
140 150 160 170 180 190 200 210 220 230 240 m657.pep
EKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILAYSIVPARLSADVQQQARQMAQR
|||||||:|||||||||||||||||||||||||||||||||||||||||:|||||||||| a657
EKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILAYSIVPARLSADIQQQARQMAQR 190
200 210 220 230 240 250 260 270 280 290 300 m657.pep
LADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNSGHHTIDACAADQFQQQVRIMCNLP
|||||:||||||||||||||||||||||||||||||||||:|||||||||||||:||||| a657
LADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNSGHHTVDACAADQFQQQVRLMCNLP 250
260 270 280 290 300 310 320 330 340 350 360 m657.pep
PADTKLLSSCCMANILGDVWQEDGGEPDWLPLQSHPNAHLHLYGKKTAHKGRKMGHFTVL
|||||||||||||||||||||||||||||:||||:|:|||||||||||||||||||||:| a657
PADTKLLSSCCMANILGDVWQEDGGEPDWFPLQSRPDAHLHLYGKKTAHKGRKMGHFTIL 310
320 330 340 350 360 370 379 m657.pep TTDSDTAFQEAKKLHQSLX
:|||||||||||||||||| a657 STDSDTAFQEAKKLHQSLX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2135>:
TABLE-US-02527 g658.seq 1 ATGGTGGCCG GAATTGTGCG TGCGCGGGGC
GGTTTCATTG ACGAGCAATT 51 CATGTGTGTC GCCGACAACA AACATTTCTA
CCGCCAAtac GCCGACATAA 101 TCCAATTCGT CCGCCAagcG TTGCGCCGTC
TGCCGCGCCT GTTGCTGCAC 151 GTCGGCACTC AGCCGCGcgg gGACGATGga
atAAGCCAAG ATGCCGTTTT 201 CGTGGATGTT TTCGGCGGGG TCGAAGGTTT
GCACGTTTTC ATCGTTCAGA 251 CGGCATACGA TCACGGAAAT CTCGCCGCGC
AAGTCCACCA TTTTTTCCAA 301 AACGCAATCC ACGCCGCCGT GTTCGGCAAA
CGCGGCTTTG AGTTCGTCCA 351 ACGTTTTGAC GCGGATTTGA CCTTTGCCGT
CGTAGCCCAA CGTAGCCGTT 401 TTCAGGATGC CGGGCAAAAA TTGCGCGCTT
GCTTCAGTAA TGTCTTCGGC 451 CTTGCAAACC GCCTGATACG GCGCGGTTTG
CAAGCCTGCT TTGCGTATCC 501 ACGCTTTTTC CTGAATGCGG TTTTGTGCAA
TGGACACGCA GTCGCCGCTG 551 GGGGAAACGT TGGTATGCTT TGCCAGAGAG
CGCATCGCGT CGGCAttgac 601 gtTTTCAAAT TCGGTcgtaA CCGCCGCGCA
TTTTGCCAAT TCGTCCAACG 651 CGGCCCGGTC GTCAAACGGC GCGCACAAAT
GGCGGTCGGC AAATTCCGCC 701 GCCGGCGCAT TCGGGTCGGG ATCGAGAACG
GTTACTTTGT AGCCCATGGT 751 TTTAGCGGCA ACGGCAAACA TTctgcctAA
This corresponds to the amino acid sequence <SEQ ID 2136; ORF
658.ng>:
TABLE-US-02528 g658.pep 1 MVAGIVRARG GFIDEQFMCV ADNKHFYRQY
ADIIQFVRQA LRRLPRLLLH 51 VGTQPRGDDG ISQDAVFVDV FGGVEGLHVF
IVQTAYDHGN LAAQVHHFFQ 101 NAIHAAVFGK RGFEFVQRFD ADLTFAVVAQ
RSRFQDAGQK LRACFSNVFG 151 LANRLIRRGL QACFAYPRFF LNAVLCNGHA
VAAGGNVGML CQRAHRVGID 201 VFKFGRNRRA FCQFVQRGPV VKRRAQMAVG
KFRRRRIRVG IENGYFVAHG 251 FSGNGKHSA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2137>:
TABLE-US-02529 m658.seq 1 ATGGTGTCCG GAATTGTGCG GGCGCGGGGC
GATTTCGTTG ACGACCAATT 51 CATGCGTGTC ACCGACAACA AACATTTCTA
CCGCCAATAC GCCGACATAA 101 TCCAATTCGT CCGCCAAGCG TTGCGCCATC
TGCCGCGCCT GTTGCTGCAC 151 GTCGGCACTC AGTCGCGCGG GGACGATGGA
ATAAGCCAAG ATGCCGTTTT 201 CGTGGATGTT TTCGGCAGGG TCGAAAGTTT
GCACGTTGTC ATTGTTCAAA 251 CGGCATACGA TTACGGAAAT TTCACTGCGC
AAATCCACCA TTTTTTCCAA 301 AACGCAATCC ACGCCGCCGT GTTCGGCAAA
CGCGGCTTTG AGTTCATCCA 351 ATGTTTTTAC GCGGATTTGA CCTTTGCCGT
CGTAGCCCAA CGTAGCCGTT 401 TTCAGGATGC CGGGCAAAAA TTGCGCGCTT
GCTTCAGTGA TGTCTTCAGC 451 CTTACAAACC ACTTGATACG GCGCGGTTTG
CAATCCCGCT TTGCGTATCC 501 ATGCCTTTTC CTGAATGCGG TTTTGTGCAA
TCGCCACACA ATCGCCGCTA 551 GGGGAAACAT TGGTATGTTT TGCCAAAAAG
CGCATCGCAT CGGCATTGAC 601 GTTTTCAAAT TCAGTGGTCA CCGCCGCGCA
TTTTGCCAAT TCGTCCAAAG 651 CAGCTTGGTC GTTAAACGGC GCGCACAAAT
GGCGGTCGGC AAATTCTGCT 701 GCCGGCGCGT CCGGATCGGG GTCGAGAACG
GTTACTTTGT AGCCCATGGT 751 TTTGGCGGCA ACGGTAAACA TTCTGCCTAA
This corresponds to the amino acid sequence <SEQ ID 2138; ORF
658>:
TABLE-US-02530 m658.pep 1 MVSGIVRARG DFVDDQFMRV TDNKHFYRQY
ADIIQFVRQA LRHLPRLLLH 51 VGTQSRGDDG ISQDAVFVDV FGRVESLHVV
IVQTAYDYGN FTAQIHHFFQ 101 NAIHAAVFGK RGFEFIQCFY ADLTFAVVAQ
RSRFQDAGQK LRACFSDVFS 151 LTNHLIRRGL QSRFAYPCLF LNAVLCNRHT
IAARGNIGMF CQKAHRIGID 201 VFKFSGHRRA FCQFVQSSLV VKRRAQMAVG
KFCCRRVRIG VENGYFVAHG 251 FGGNGKHSA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02531 m658/g658 82.2% identity in 259 aa overlap 10 20 30
40 50 60 m658.pep
MVSGIVRARGDFVDDQFMRVTDNKHFYRQYADIIQFVRQALRHLPRLLLHVGTQSRGDDG
||:||||||| |:|:||| |:|||||||||||||||||||||:||||||||||| ||||| g658
MVAGIVRARGGFIDEQFMCVADNKHFYRQYADIIQFVRQALRRLPRLLLHVGTQPRGDDG 10 20
30 40 50 60 70 80 90 100 110 120 m658.pep
ISQDAVFVDVFGRVESLHVVIVQTAYDYGNFTAQIHHFFQNAIHAAVFGKRGFEFIQCFY
|||||||||||| ||:||| |||||||:||::||:||||||||||||||||||||:| | g658
ISQDAVFVDVFGGVEGLHVFIVQTAYDHGNLAAQVHHFFQNAIHAAVFGKRGFEFVQRFD 70 80
90 100 110 120 130 140 150 160 170 180 m658.pep
ADLTFAVVAQRSRFQDAGQKLRACFSDVFSLTNHLIRRGLQSRFAYPCLFLNAVLCNRHT
||||||||||||||||||||||||||:||:|:|:|||||||: |||| :|||||||| |: g658
ADLTFAVVAQRSRFQDAGQKLRACFSNVFGLANRLIRRGLQACFAYPRFFLNAVLCNGHA 130
140 150 160 170 180 190 200 210 220 230 240 m658.pep
IAARGNIGMFCQKAHRIGIDVFKFSGHRRAFCQFVQSSLVVKRRAQMAVGKFCCRRVRIG :||
||:||:||:|||:|||||||: :||||||||| : ||||||||||||| ||:|:| g658
VAAGGNVGMLCQRAHRVGIDVFKFGRNRRAFCQFVQRGPVVKRRAQMAVGKFRRRRIRVG 190
200 210 220 230 240 250 260 m658.pep VENGYFVAHGFGGNGKHSAX
:||||||||||:|||||||| g658 IENGYFVAHGFSGNGKHSAX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2139>:
TABLE-US-02532 a658.seq 1 ATGGTGGCCG GAATTGTGCG GACGCGGCGC
GATTTCGTTG ACGACCAATT 51 CATGCGTGTC GCCGACAACA AACATTTCTA
CCGCCAATAC GCCGACGTAG 101 TTCAATTCAT CGGCCAAACG CTGCGCCATT
TGTCGCGCCT GTTGCTGAAT 151 GTCGGCACTC AGTCGGGCTG GGACGATGGA
GTAGGCGAGG ATACCGTTTT 201 CGTGAATGTT TTCGGCAGGA TCGAAAGTTT
GCACGTTGTC ATTGTTCAGA 251 CGGCATACGA TAACGGAAAT TTCGCCGCGC
AAGTCCACCA TTTTTTCCAA 301 AACGCAATCC ACGCCGCGGT GTTCGGCAAA
CGCGGCTTTG AGTTCATCCA 351 CCGTTTTGAC GCGGATTTGG CCTTTGCCGT
CATAGCCCAA TGTAGCGGTT 401 TTCAGGATGC CGGGCAGAAA TTGTATGCTT
TCTTCAGTGA TGTCTTCGGC 451 TTTGCAAATT GCTTGATACG GCGCGGTTTG
CAGGCCTGCT TTGCGTATCC 501 ATGCCTTTTC CTGAATGCGG TTTTGCGCGA
TGGCAACGCA GTCGCCGCTG 551 GGGGAAACAT TGGTATGTTT GGCGAGAAAA
CGCATCGCAT CGGCATTGAC 601 GTTTTCGAAC TCGGTCGTAA CAGCCGCACA
TTTTGCCAAT TCTTCCAAAG 651 CGGTTTGGTT GTCAAACGGC GCACACAAAT
GGCGGTCGGC AAATTCCGCT 701 GCCGGCGCAT TCGGGTTGGG ATCGAGTACG
GTTACTTTGT AGCCCATGGT 751 TTTGGCAGCA ACAGTAAACA TTCTGCCTAA
This corresponds to the amino acid sequence <SEQ ID 2140; ORF
658.a>:
TABLE-US-02533 a658.pep 1 MVAGIVRTRR DFVDDQFMRV ADNKHFYRQY
ADVVQFIGQT LRHLSRLLLN 51 VGTQSGWDDG VGEDTVFVNV FGRIESLHVV
IVQTAYDNGN FAAQVHHFFQ 101 NAIHAAVFGK RGFEFIHRFD ADLAFAVIAQ
CSGFQDAGQK LYAFFSDVFG 151 FANCLIRRGL QACFAYPCLF LNAVLRDGNA
VAAGGNIGMF GEKTHRIGID 201 VFELGRNSRT FCQFFQSGLV VKRRTQMAVG
KFRCRRIRVG IEYGYFVAHG 251 FGSNSKHSA* m658/a658 75.3% identity in
259 aa overlap 10 20 30 40 50 60 m658.pep
MVSGIVRARGDFVDDQFMRVTDNKHFYRQYADIIQFVRQALRHLPRLLLHVGTQSRGDDG
||:||||:| ||||||||||:|||||||||||::||: |:|||| ||||:||||| ||| a658
MVAGIVRTRRDFVDDQFMRVADNKHFYRQYADVVQFIGQTLRHLSRLLLNVGTQSGWDDG 10 20
30 40 50 60 70 80 90 100 110 120 m658.pep
ISQDAVFVDVFGRVESLHVVIVQTAYDYGNFTAQIHHFFQNAIHAAVFGKRGFEFIQCFY
:::|:|||:||||:||||||||||||| |||:||:|||||||||||||||||||||: | a658
VGEDTVFVNVFGRIESLHVVIVQTAYDNGNFAAQVHHFFQNAIHAAVFGKRGFEFIHRFD 70 80
90 100 110 120 130 140 150 160 170 180 m658.pep
ADLTFAVVAQRSRFQDAGQKLRACFSDVFSLTNHLIRRGLQSRFAYPCLFLNAVLCNRHT
|||:|||:|| | |||||||| | |||||:::| |||||||: |||||||||||| : :: a658
ADLAFAVIAQCSGFQDAGQKLYAFFSDVFGFANCLIRRGLQACFAYPCLFLNAVLRDGNA 130
140 150 160 170 180 190 200 210 220 230 240 m658.pep
IAARGNIGMFCQKAHRIGIDVFKFSGHRRAFCQFVQSSLVVKRRAQMAVGKFCCRRVRIG :||
|||||| :|:||||||||::: : |:|||| ||:||||||:||||||| |||:|:| a658
VAAGGNIGMFGEKTHRIGIDVFELGRNSRTFCQFFQSGLVVKRRTQMAVGKFRCRRIRVG 190
200 210 220 230 240 250 260 m658.pep VENGYFVAHGFGGNGKHSAX :|
|||||||||:|:||||| a658 IEYGYFVAHGFGSNSKHSAX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2141>:
TABLE-US-02534 g661.seq 1 ATGCACATCG GCGGTTATTT TATCGACAAC
CCCATCGCAC TTGCGCCGAT 51 GGCGGGCATT GCCGACAAAC CCTTCCGCCG
CCTCTGTCGG GCGTTTGGCG 101 CAGGTTGGGC GGTGTGCGAA ATGCTGGCCA
GCGATCCGAC GCTCAGGAAT 151 ACCGGAAAAA CCCtgcaccg cagtgaTTTt
gccgatgaag gCGGCATCGT 201 TGCCGTGCAG ATTGCCGGCA GCGACCccga
acaGATGGCG Gatgcggcgc 251 gttacAACGT CGGACTCGGG GCGCAGGTCA
TCGACATcaa TATGGGCTGC 301 cccgccaaGA AAGTGTGCAA CGTCCAAGCC
GGTAGCGCgc tGATGCAGGA 351 CGAGccgctg gttgcCgcca tTTtggaggc
ggtggtcAAG GCGGCGGgcg 401 TACCCGTTAC cctCAAAACc cgtTtgggtt
ggcacgacga cgatcaaaac 451 ctgcCcgccg tcgccaaaat cgccgaagat
tgcggcattg ccgccCttgc 501 cgttccacgg gcgCGCgcgC ACGCAAATGT
ACAAAGGCGA GGCgcGTTAC 551 Gaactcatcg CCGAGACCAA AAGccgTCTG
AACATCCCGG cctGggtCAA 601 CGGCGACATC actTCgccgc AAAAAGCCGC
CGccgTCCTC AAACAAACCG 651 CCGCCGACGG CATCATGATA GGGCGCGGCG
CGCAAGGCAG GCCGTGGTTT 701 TTCCGCGATT TGAAGCATTA TGCCGAACAC
GGCGTTTTAC CGCCTGCCTT 751 GAGTTTGGCA GAATGCAGAG CCGCCATTTT
GAACCACATC CGCGCCATGC 801 ACGCGTTTTA TGGTGAGACC GTCGGTGTGC
GCATCGCACG CAAACACATA 851 GGCTGGTACA TCGGCGAAAT GCCCGACGGC
GAACAGGCGC GGCGTGA
This corresponds to the amino acid sequence <SEQ ID 2142; ORF
661.ng>:
TABLE-US-02535 g661.pep 1 MHIGGYFIDN PIALAPMAGI ADKPFRRLCR
AFGAGWAVCE MLASDPTLRN 51 TGKTLHRSDF ADEGGIVAVQ IAGSDPEQMA
DAARYNVGLG AQVIDINMGC 101 PAKKVCNVQA GSALMQDEPL VAAILEAVVK
AAGVPVTLKT RLGWHDDDQN 151 LPAVAKIAED CGIAALAVPR ARAHANVQRR
GALRTHRRDQ KPSEHPGLGQ 201 RRHHFAAKSR RRPQTNRRRR HHDRARRARQ
AVVFPRFEAL CRTRRFTACL 251 EFGRMQSRHF EPHPRHARVL WXDRRCAHRT
QTHRLVHRRN ARRRTGAA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2143>:
TABLE-US-02536 m661.seq 1 ATGCACATCG GCGGCTATTT TATCGACAAC
CCCATCGCAC TTGCGCCGAT 51 GGCGGGCATT ACCGACAAAC CGTTCCGCCG
ACTTTGCCGA GATTTTGGCG 101 CAGGTTGGGC GGTGTGCGAA ATGCTGACCA
GCGACCCGAC GCTCAGAAAT 151 ACTAGAAAAA CCTTGCACCG CAGCGATTTT
GCCGATGAAG GCGGCATTGT 201 TGCCGTGCAG ATTGCCGGAA GCGATCCGCA
GCAGATGGCG GATGCCGCGC 251 GTTACAACGT CAGCCTTGGG GCGCAGCTTA
TCGACATCAA CATGGGCTGT 301 CCCGCTAAAA AAGTCTGCAA TGTCCAAGCC
GGTAGCGCGC TGATGCAGAA 351 CGAGCCGCTG GTTGCCGCCA TTTTGGAAGC
CGTCGTCCGT GCGGCAGGCG 401 TACCCGTTAC CCTCAAAACC CGTTTGGGTT
GGCACGACGA CCATCAAAAC 451 CTGCCCGTCA TCGCCAAAAT CGCCGAAGAT
TGCGGCATCG CCGCCCTTGC 501 CGTCC.ACGG ACGCACGCGT ACGCAAATGT
ACAAAGGCGA AGCGCGTTAC 551 GAACTCATCG CCGAAACCAA ATGCCGTCTG
AACATCCCGG TCTGGGTCAA 601 CGGCGACATT ACTTCGCCGC AAAAAGCCCA
AGCCGTCCTC AAACAAACCG 651 CCGCCGACGG CATTATGATA GGGCGCGGCG
CGCAAGGCAG GCCGTGGTTC 701 TTCCGCGATT TGAAACATTA TGCCGAACAC
GGTGTTTTGC CGCCTGCCTT 751 GAGTTTGGCA GAATGCGCCG CCGCTATTTT
GAACCACATC CGCGCCATAC 801 ACGCGTTTTA CGGCGACACC GCCGGTGTGC
GCATCGCACG CAAACACATA 851 GGCTGGTACA TCGACGAAAT GCCCGACGGC
GAACAGACAC GTCGTGA
This corresponds to the amino acid sequence <SEQ ID 2144; ORF
661>:
TABLE-US-02537 m661.pep 1 MHIGGYFIDN PIALAPMAGI TDKPFRRLCR
DFGAGWAVCE MLTSDPTLRN 51 TRKTLHRSDF ADEGGIVAVQ IAGSDPQQMA
DAARYNVSLG AQLIDINMGC 101 PAKKVCNVQA GSALMQNEPL VAAILEAVVR
AAGVPVTLKT RLGWHDDHQN 151 LPVIAKIAED CGIAALAVXR THAYANVQRR
SALRTHRRNQ MPSEHPGLGQ 201 RRHYFAAKSP SRPQTNRRRR HYDRARRARQ
AVVLPRFETL CRTRCFAACL 251 EFGRMRRRYF EPHPRHTRVL RRHRRCAHRT
QTHRLVHRRN ARRRTDTS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02538 m661/g661 88.5% identity in 295 aa overlap 10 20 30
40 50 60 m661.pep
MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTSDPTLRNTRKTLHRSDF
||||||||||||||||||||:||||||||| |||||||||||:|||||||| |||||||| g661
MHIGGYFIDNPIALAPMAGIADKPFRRLCRAFGAGWAVCEMLASDPTLRNTGKTLHRSDF 10 20
30 40 50 60 70 80 90 100 110 120 m661.pep
ADEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPAKKVCNVQAGSALMQNEPL
||||||||||||||||:||||||||||:||||:|||||||||||||||||||||||:||| g661
ADEGGIVAVQIAGSDPEQMADAARYNVGLGAQVIDINMGCPAKKVCNVQAGSALMQDEPL 70 80
90 100 110 120 130 140 150 160 170 180 m661.pep
VAAILEAVVRAAGVPVTLKTRLGWHDDHQNLPVIAKIAEDCGIAALAVXRTHAYANVQRR
|||||||||:||||||||||||||||| ||||::|||||||||||||| |::|:|||||| g661
VAAILEAVVKAAGVPVTLKTRLGWHDDDQNLPAVAKIAEDCGIAALAVPRARAHANVQRR 130
140 150 160 170 180 190 200 210 220 230 240 m661.pep
SALRTHRRNQMPSEHPGLGQRRHYFAAKSPSRPQTNRRRRHYDRARRARQAVVLPRFETL
:|||||||:| ||||||||||||:||||| ||||||||||:|||||||||||:||||:| g661
GALRTHRRDQKPSEHPGLGQRRHHFAAKSRRRPQTNRRRRHHDRARRARQAVVFPRFEAL 190
200 210 220 230 240 250 260 270 280 290 299 m661.pep
CRTRCFAACLEFGRMRRRYFEPHPRHTRVLRRHRRCAHRTQTHRLVHRRNARRRTDTSX ||||
|:||||||||: |:|||||||:||| |||||||||||||||||||||| g661
CRTRRFTACLEFGRMQSRHFEPHPRHARVLWXDRRCAHRTQTHRLVHRRNARRRTGAAX 250 260
270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2145>:
TABLE-US-02539 a661.seq 1 ATGCACATCG GCGGCTATTT TATCGACAAC
CCCATCGCAC TTGCGCCGAT 51 GGCGGGCATT ACCGACAAAC CGTTCCGCCG
ACTTTGCCGA GATTTTGGCG 101 CAGGTTGGGC GGTGTGCGAA ATGCTGACCA
GCGACCCGAC GCTCAGAAAT 151 ACTAGAAAAA CCTTGCACCG CAGCGATTTT
GCCGATGAAG GCGGCATTGT 201 TGCCGTGCAG ATTGCCGGAA GCGATCCGCA
GCAGATGGCG GATGCCGCGC 251 GTTACAACGT CAGCCTTGGG GCGCAGCTTA
TCGACATCAA CATGGGCTGT 301 CCCGCTAAAA AAGTCTGCAA TGTCCAAGCC
GGTAGCGCGC TGATGCAGAA 351 CGAGCCGCTG GTTGCCGCCA TTTTGGAGGC
GGTGGTCAAA GCGGCGGGCG 401 TACCCGTTAC CCTCAAAACC CGTTTGGGTT
GGCACGACGA CCATCAAAAC 451 CTGCCCGTCA TCGCCAAAAT CGCCGAAGAT
TGCGGCATTG CCGCCCTTGC 501 CG.TCCACGG ACGCACGCGC ACGCAAATGT
ACAAAGGCGA AGCGGCTTAC 551 GACCTGATTG CCGAAACCAA ATGCCGTCTG
AACATCCCGG TCTGGGTCAA 601 CGGCGACATT ACCTCGCCGC AAAAAGCCCA
AGCCGTCCTC AAACAAACCG 651 CCGCAGACGG CATTATGATA GGGCGCGGCG
CGCAAGGCAG ACCGTGGTTC 701 TTCCGCGATT TGAAACATTA CGCCGAACAC
GGTGTTTTAC CGCCTGCCTT 751 GAGTTTGGCA GAATGTACCG CCACTATTTT
GAACCACATC CGAGCCATGC 801 ACGCGTTTTA CGGCGACACC GCCGGTGTGC
GCATCGCACG CAAACACATA 851 GGCTGGTACA TCGACGAAAT GCCCGACGGC
GAACAGACAC GTCGTGA
This corresponds to the amino acid sequence <SEQ ID 2146; ORF
661.a>:
TABLE-US-02540 a661.pep 1 MHIGGYFIDN PIALAPMAGI TDKPFRRLCR
DFGAGWAVCE MLTSDPTLRN 51 TRKTLHRSDF ADEGGIVAVQ IAGSDPQQMA
DAARYNVSLG AQLIDINMGC 101 PAKKVCNVQA GSALMQNEPL VAAILEAVVK
AAGVPVTLKT RLGWHDDHQN 151 LPVIAKIAED CGIAALAXPR THAHANVQRR
SGLRPDCRNQ MPSEHPGLGQ 201 RRHYLAAKSP SRPQTNRRRR HYDRARRARQ
TVVLPRFETL RRTRCFTACL 251 EFGRMYRHYF EPHPSHARVL RRHRRCAHRT
QTHRLVHRRN ARRRTDTS* m661/a661 94.6% identity in 298 aa overlap 10
20 30 40 50 60 m661.pep
MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTSDPTLRNTRKTLHRSDF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a661
MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTSDPTLRNTRKTLHRSDF 10 20
30 40 50 60 70 80 90 100 110 120 m661.pep
ADEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPAKKVCNVQAGSALMQNEPL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a661
ADEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPAKKVCNVQAGSALMQNEPL 70 80
90 100 110 120 130 140 150 160 170 180 m661.pep
VAAILEAVVRAAGVPVTLKTRLGWHDDHQNLPVIAKIAEDCGIAALAVXRTHAYANVQRR
|||||||||:||||||||||||||||||||||||||||||||||||| ||||:|||||| a661
VAAILEAVVKAAGVPVTLKTRLGWHDDHQNLPVIAKIAEDCGIAALAXPRTHAHANVQRR 130
140 150 160 170 180 190 200 210 220 230 240 m661.pep
SALRTHRRNQMPSEHPGLGQRRHYFAAKSPSRPQTNRRRRHYDRARRARQAVVLPRFETL |:||
|||||||||||||||||:|||||||||||||||||||||||||:||||||||| a661
SGLRPDCRNQMPSEHPGLGQRRHYLAAKSPSRPQTNRRRRHYDRARRARQTVVLPRFETL 190
200 210 220 230 240 250 260 270 280 290 299 m661.pep
CRTRCFAACLEFGRMRRRYFEPHPRHTRVLRRHRRCAHRTQTHRLVHRRNARRRTDTSX
|||||:|||||||| |:|||||| |:|||||||||||||||||||||||||||||||| a661
RRTRCFTACLEFGRMYRHYFEPHPSHARVLRRHRRCAHRTQTHRLVHRRNARRRTDTSX 250 260
270 280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2147>:
TABLE-US-02541 g663.seq 1 ATGTGTACCG AGATGAAATT TATATTTTTT
GTACTGTATG TTTTGCAGTT 51 TCTGCCGTTT GCGCTGCTGC ACAAGATTGC
CGGCCTGATC GGTTCGCTTG 101 CCTACCTTCT GGTCAAACCG CGCCGCCGTA
TCGGCGAAAT CAATTTGGCA 151 AAATGTTTTC CCGAATGGGA CGAAGAAAAG
CGTAAAACCG TGTTGAAACA 201 GCATTTCAAA CACATGGCAA AACTGATGCT
CGAATACGGC TTATATTGGT 251 ACGCGtctGC CAAATGCCTG AAATCGCTGG
TGCGCTACCG CAATAAGCAT 301 TATTTGGACG ACGCGCTGGC GGCGGGGGAA
AAAGTCATCA TCCTGTACCC 351 GCACTTTACC GCGTTCGAGA TGGCGGTGTA
CGCGCTTAAT CAGGATGTCC 401 CGCTGATCAG TATGTATTCC CACCAAAAAA
ACAAGATATT GGACGAACAG 451 ATTTTGAAAg gccgcaACCG CTATCACAAC
GTCTTCCTTA TCGGGCGCAC 501 CGAagggctg cgCGCCCtcg TCAAACAGTT
CCGCAAAAGC AGTGCGCCGT 551 TCCTGTATCT GCCCGATCAG GATTTCGGAC
GCAACAATTC GGTTTTTGTG 601 GATTTTTTCG GCATtcagaC GGCAACGATT
ACCGGCTTGA GCCGCATTGC 651 CGCGCTTGCA AATGCAAAAG TGATACCCGC
CATTCCCGTC CGCGAGGCGG 701 ACAATACGGT TACATTGCAA TTCTATCCCG
CTTGGAAATC CTTTCCGAGT 751 GAAGACGCGC AAGCCGACGC GCAACGTATG
AACCGCTTTA TCGAAGAACG 801 CGTGCGCGAA CACCCGGAAC AATATTTCTG
GCTGCACAAG CGTTTCAAAA 851 CCCGTCCGGA AGGCAGCCCC GATTTTTACT GA
This corresponds to the amino acid sequence <SEQ ID 2148; ORF
663.ng>:
TABLE-US-02542 g663.pep 1 MCTEMKFIFF VLYVLQFLPF ALLHKIAGLI
GSLAYLLVKP RRRIGEINLA 51 KCFPEWDEEK RKTVLKQHFK HMAKLMLEYG
LYWYASAKCL KSLVRYRNKH 101 YLDDALAAGE KVIILYPHFT AFEMAVYALN
QDVPLISMYS HQKNKILDEQ 151 ILKGRNRYHN VFLIGRTEGL RALVKQFRKS
SAPFLYLPDQ DFGRNNSVFV 201 DFFGIQTATI TGLSRIAALA NAKVIPAIPV
READNTVTLQ FYPAWKSFPS 251 EDAQADAQRM NRFIEERVRE HPEQYFWLHK
RFKTRPEGSP DFY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2149>:
TABLE-US-02543 m663.seq 1 ATGTGTATCG AGATGAAATT TATATTTTTT
GTACTGTATG TTTTGCAGTT 51 TCTGCCGTTT GCGCTGCTGC ACAAGATTGC
CGACCTGACG GGTTTGCTTG 101 CCTACCTTCT GGTCAAACCG CGCCGCCGTA
TCGGCGAAAT CAATTTGGCA 151 AAATGTTTTT CCGAATGGAG TGAGGAAAAG
CGTAAAACCG TGTTGAAACA 201 GCATTTCAAA CACATGGCGA AACTGATGTT
GGAATACGGT TTATATTGGT 251 ACGCGCCTGC CGGACGTTTG AAATCGCTGG
TGCGCTACCG CAATAAGCAT 301 TATTTGGACG ACGCGCTGGC GGCGGGGGAA
AAAGTCATCA TCCTGTATCC 351 GCACTTCACC GCGTTCGAGA TGGCGGTGTA
CGCGCTTAAT CAGGATATCC 401 CGCTGATCAG TATGTATTCC CATCAAAAAA
ACAAGATATT GGACGAACAG 451 ATTTTGAAAG GCCGCAACCG CTATCACAAC
GTCTTCCTTA TCGGGCGCAC 501 CGAAGGGCTG CGCGCCCTCG TCAAACAGTT
CCGCAAAAGC AGCGCGCCGT 551 TTCTGTATCT GCCCGATCAG GATTTCGGAC
GCAACGATTC GGTTTTTGTG 601 GATTTTTTCG GTATTCAGAC GGCAACGATT
ACCGGATTGA GCCGCATTGC 651 CGCGCTTGCA AATGCAAAAG TGATACCCGC
CATTCCCGTC CGCGAGGCAG 701 ACAATACGGT TACATTGCAT TTCTACCCTG
CTTGGAAATC CTTTCCGGGT 751 GAAGACGCGA AAGCCGACGC GCAGCGCATG
AACCGTTTTA TCGAAGACAG 801 GGTGCGCGAA CATCCGGAAC AATATTTTTG
GCTGCACAAG CGTTTTAAAA 851 CCCGTCCGGA AGGCAGCCCC GATTTTTACT GA
This corresponds to the amino acid sequence <SEQ ID 2150; ORF
663>:
TABLE-US-02544 m663.pep 1 MCIEMKFIFF VLYVLQFLPF ALLHKIADLT
GLLAYLLVKP RRRIGEINLA 51 KCFSEWSEEK RKTVLKQHFK HMAKLMLEYG
LYWYAPAGRL KSLVRYRNKH 101 YLDDALAAGE KVIILYPHFT AFEMAVYALN
QDIPLISMYS HQKNKILDEQ 151 ILKGRNRYHN VFLIGRTEGL RALVKQFRKS
SAPFLYLPDQ DFGRNDSVFV 201 DFFGIQTATI TGLSRIAALA NAKVIPAIPV
READNTVTLH FYPAWKSFPG 251 EDAKADAQRM NRFIEDRVRE HPEQYFWLHK
RFKTRPEGSP DFY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02545 m663/g663 94.9% identity in 293 aa overlap 10 20 30
40 50 60 m663.pep
MCIEMKFIFFVLYVLQFLPFALLHKIADLTGLLAYLLVKPRRRIGEINLAKCFSEWSEEK ||
|||||||||||||||||||||||| | | ||||||||||||||||||||| ||:||| g663
MCTEMKFIFFVLYVLQFLPFALLHKIAGLIGSLAYLLVKPRRRIGEINLAKCFPEWDEEK 10 20
30 40 50 60 70 80 90 100 110 120 m663.pep
RKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDALAAGEKVIILYPHFT
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| g663
RKTVLKQHFKHMAKLMLEYGLYWYASAKCLKSLVRYRNKHYLDDALAAGEKVIILYPHFT 70 80
90 100 110 120 130 140 150 160 170 180 m663.pep
AFEMAVYALNQDIPLISMYSHQKNKILDEQILKGRNRYHNVFLIGRTEGLRALVKQFRKS
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| g663
AFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIGRTEGLRALVKQFRKS 130
140 150 160 170 180 190 200 210 220 230 240 m663.pep
SAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREADNTVTLH
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||: g663
SAPFLYLPDQDFGRNNSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREADNTVTLQ 190
200 210 220 230 240 250 260 270 280 290 m663.pep
FYPAWKSFPGEDAKADAQRMNRFIEDRVREHPEQYFWLHKRFKTRPEGSPDFYX
|||||||||:|||:|||||||||||:|||||||||||||||||||||||||||| g663
FYPAWKSFPSEDAQADAQRMNRFIEERVREHPEQYFWLHKRFKTRPEGSPDFYX 250 260 270
280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2151>:
TABLE-US-02546 a663.seq 1 ATGTGTATCG AGATGAAATT TATATTTTTT
GTACTGTATG TTTTGCAGTT 51 TCTGCCGTTT GCGCTGCTGC ACAAACTTGC
TGATCTGACA GGCTTGCTCG 101 CCTACCTTTT GGTCAAACCC CGCCGCCGTA
TCGGCGAAAT CAATTTGGCA 151 AAATGCTTTC CCGAGTGGGA CGGAAAAAAG
CGTAAAACCG TGTTGAAACA 201 GCATTTCAAA CATATGGCGA AACTGATGTT
GGAATACGGT TTATATTGGT 251 ACGCGCCCGC CGGGCGTTTG AAATCACTGG
TGCGCTACCG CAACAAACAT 301 TATTTGGACG ACGCTCTGGC GGCAGGGGAA
AAAGTCATCA TCCTGTATCC 351 GCACTTCACC GCGTTCGAGA TGGCGGTGTA
CGCGCTCAAT CAGGATGTTC 401 CGCTGATCAG TATGTATTCC CACCAAAAAA
ACAAGATATT GGACGAACAG 451 ATTTTGAAAG GCCGCAACCG CTATCACAAC
GTTTTCCTTA TCGGGCGCAC 501 CGAAGGGCTG CGCGCCCTCG TCAAACAGTT
CCGCAAAAGC AGCGCGCCGT 551 TTCTGTATCT GCCCGATCAG GATTTCGGAC
GCAACGATTC GGTTTTTGTC 601 GATTTCTTCG GTATTCGGAC GGCAACGATT
ACCGGCTTGA GCCGCATTGC 651 CGCGCTTGCA AATGCAAAAG TGATACCCGC
CATCCCTGTC CGCGAGGCGG 701 ACAATACGGT TACATTGCAT TTCTACCCTG
CTTGGGAATC CTTTCCGAGT 751 GAAGATGCGC AGGCCGACGC GCAGCGCATG
AACCGTTTTA TCGAGGAACG 801 CGTGCGCGAA CATCCCGAGC AGTATTTTTG
GCTGCACAAG CGTTTCAAAA 851 CCCGTCCGGA AGGCAGCCCC GATTTTTACT GA
This corresponds to the amino acid sequence <SEQ ID 2152; ORF
663.a>:
TABLE-US-02547 a663.pep 1 MCIEMKFIFF VLYVLQFLPF ALLHKLADLT
GLLAYLLVKP RRRIGEINLA 51 KCFPEWDGKK RKTVLKQHFK HMAKLMLEYG
LYWYAPAGRL KSLVRYRNKH 101 YLDDALAAGE KVIILYPHFT AFEMAVYALN
QDVPLISMYS HQKNKILDEQ 151 ILKGRNRYHN VFLIGRTEGL RALVKQFRKS
SAPFLYLPDQ DFGRNDSVFV 201 DFFGIRTATI TGLSRIAALA NAKVIPAIPV
READNTVTLH FYPAWESFPS 251 EDAQADAQRM NRFIEERVRE HPEQYFWLHK
RFKTRPEGSP DFY* m663/a663 96.2% identity in 293 aa overlap 10 20 30
40 50 60 m663.pep
MCIEMKFIFFVLYVLQFLPFALLHKIADLTGLLAYLLVKPRRRIGEINLAKCFSEWSEEK
|||||||||||||||||||||||||:||||||||||||||||||||||||| ||: :| a663
MCIEMKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEINLAKCFPEWDGKK 10 20
30 40 50 60 70 80 90 100 110 120 m663.pep
RKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDALAAGEKVIILYPHFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a663
RKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDALAAGEKVIILYPHFT 70 80
90 100 110 120 130 140 150 160 170 180 m663.pep
AFEMAVYALNQDIPLISMYSHQKNKILDEQILKGRNRYHNVFLIGRTEGLRALVKQFRKS
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a663
AFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIGRTEGLRALVKQFRKS 130
140 150 160 170 180 190 200 210 220 230 240 m663.pep
SAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREADNLVTLH
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a663
SAPFLYLPDQDFGRNDSVFVDFFGIRTATITGLSRIAALANAKVIPAIPVREADNLVTLH 190
200 210 220 230 240 250 260 270 280 290 m663.pep
FYPAWKSFPGEDAKADAQRMNRFIEDRVREHPEQYFWLHKRFKTRPEGSPDFYX
|||||:|||:|||:|||||||||||:|||||||||||||||||||||||||||| a663
FYPAWESFPSEDAQADAQRMNRFIEERVREHPEQYFWLHKRFKTRPEGSPDFYX 250 260 270
280 290
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2153>:
TABLE-US-02548 g664.seq 1 ATGATACATC CGCACCACTT CCGCGCCTTT
TTCATAAACG GTCATGGTGT 51 AGAAATTGTT CATCTCCTCA TAGCTGAcgg
gGCGCACCGG ATGGGCGGTC 101 GGGCCTGCGT CTTCGGGGAA CTGGTTCTGG
CGCAGCAGGC GGATGTTCTC 151 GATGCGGCGC ACGGCGCGGC CGGCGCGGTC
GCCGGAAAAC TCTTGGTCGC 201 GGAACACGGT CAGCCCTTCC TTCAGCGAAA
GCTGGAACCA GTCGCGGCAG 251 GTTACGCGGT TGCCCGTCCA GTTGTGGAAA
TATTCGTGTC CGACCACGGA 301 TTCAATGCCT TCGAAATCGG TATCGGTGGC
GGTGCGGCTG TCGGCGAGGA 351 CGAACTTGGT GTTAAAAATG TTCAAACCCT
TGTTTTCCAT CGCGCCCATA 401 TTGAAATCGC CTACGGCGAC GACCATGAaa
atatccaagt cataTTCcaa 451 cCcgaagcgc gtttcgtcCc acttcatcgC
gtTTTTTCAA cgaTTCCACG 501 GCAAAGCCGA CCTTGGGTTT GTCCGCTTCG
GTGGTGTAAA ACTCGATTTT 551 GA
This corresponds to the amino acid sequence <SEQ ID 2154; ORF
664.ng>:
TABLE-US-02549 g664.pep 1 MIHPHHFRAF FINGHGVEIV HLLIADGAHR
MGGRACVFGE LVLAQQADVL 51 DAAHGAAGAV AGKLLVAEHG QPFLQRKLEP
VAAGYAVARP VVEIFVSDHG 101 FNAFEIGIGG GAAVGEDELG VKNVQTLVFH
RAHIEIAYGD DHENIQVIFQ 151 PEARFVPLHR VFSTIPRQSR PWVCPLRWCK TRF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2155>:
TABLE-US-02550 m664.seq 1 GTGATACATC CGCACTACTT CCGCGCCTTT
TTCATAAACG GTCATGGTGT 51 AGAAATTGTT CATCTCCTCA TAGCTGGCGG
GGCGCACCGG ATGGGCGGTC 101 GGGCCTGCGT CTTCGGGGAA CTGGTGCTGG
CGCAGCAGGC GGATGTTTTC 151 GATGCGGCGC ACGGCGCGGC TGGCGCGGTC
GCCGGAAAAT TCTTGGTCGC 201 GGAACACGGT CAGCCCTTCC TTCAGCGAAA
GCTGGAACCA GTCGCGGCAG 251 GTTACGCGGT TGCCCGTCCA GTTGTGGAAA
TACTCGTGTC CGACCACGGA 301 TTCGATGCCT TCGAAATCGG TATCGGTGGC
GGTGCGGCTG TCGGCAAGGA 351 CGAACTTGGT GTTAAAGATG TTCAAACCCT
TGTTTTCCAT CGCGCCCATA 401 TTGAAATCGC CCACGGCGAC GACCATGAAA
ATATCCAAGT CGTATTCCAA 451 ACCGAAGCGC GTTTCGTCCC ATTTCATCGC
GTTTTT.CAA CGATTCCACG 501 GCAAAGCCGA CCTTGGGCTT GTCCGCTTCG
GTGGTGTAAA ACTCGATTTT 551 GA
This corresponds to the amino acid sequence <SEQ ID 2156; ORF
664>:
TABLE-US-02551 m664.pep 1 VIHPHYFRAF FINGHGVEIV HLLIAGGAHR
MGGRACVFGE LVLAQQADVF 51 DAAHGAAGAV AGKFLVAEHG QPFLQRKLEP
VAAGYAVARP VVEILVSDHG 101 FDAFEIGIGG GAAVGKDELG VKDVQTLVFH
RAHIEIAHGD DHENIQVVFQ 151 TEARFVPFHR VFXTIPRQSR PWACPLRWCK TRF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02552 m664/g664 91.8% identity in 183 aa overlap 10 20 30
40 50 60 m664.pep
VIHPHYFRAFFINGHGVEIVHLLIAGGAHRMGGRACVFGELVLAQQADVFDAAHGAAGAV
:||||:||||||||||||||||||| |||||||||||||||||||||||:|||||||||| g664
MIHPHHFRAFFINGHGVEIVHLLIADGAHRMGGRACVFGELVLAQQADVLDAAHGAAGAV 10 20
30 40 50 60 70 80 90 100 110 120 m664.pep
AGKFLVAEHGQPFLQRKLEPVAAGYAVARPVVEILVSDHGFDAFEIGIGGGAAVGKDELG
|||:||||||||||||||||||||||||||||||:||||||:|||||||||||||:|||| g664
AGKLLVAEHGQPFLQRKLEPVAAGYAVARPVVEIFVSDHGFNAFEIGIGGGAAVGEDELG 70 80
90 100 110 120 130 140 150 160 170 180 m664.pep
VKDVQTLVFHRAHIEIAHGDDHENIQVVFQTEARFVPFHRVFXTIPRQSRPWACPLRWCK
||:||||||||||||||:|||||||||:|| ||||||:|||| |||||||||:||||||| g664
VKNVQTLVFHRAHIEIAYGDDHENIQVIFQPEARFVPLHRVFSTIPRQSRPWVCPLRWCK 130
140 150 160 170 180 m664.pep TRFX |||| g664 TRFX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2157>:
TABLE-US-02553 a664.seq. 1 GTGATACATC CGCACCACTT CCGCGCCTTT
TTCATAAACG GTCATGGTGT 51 AGAAATTGTT CATCTCCTCA TATCGGGCGG
GGCGCACCGG ATGTGCGGTC 101 GGACCTGCGT CTTCGGGGAA CTGGTGCTGG
CGCAGCAGGC GGATGTTTTC 151 GATACGGCGC ACGGCGCGGC TGGCGCGGTC
GCCGGAAAAT TCTTGGTCGC 201 GGAACACGGT CAACCCTTCC TTCAGCGAAA
GCTGGAACCA GTCGCGGCAG 251 GTCACGCGGT TGCCCGTCCA GTTGTGGAAA
TATTCGTGTC CGACCACGGA 301 TTCGATGCCT TCAAAATCGG TATCGGTGGC
GGTACGGCTG TCGGCAAGGA 351 CGAACTTGGT GTTAAAGATG TTCAAACCCT
TGTTTTCCAT CGCACCCATA 401 TTGAAATCGC CCACGGCGAC GACCATGAAA
ATATCCAAGT CGTATTCCAA 451 ACCGAAGCGC GTTTCGTCCC ACTTCATTGC
GTTTTT.CAG CGATTCCACG 501 GCAAAGCCGA CCTTGGGCTT GTCCGCTTCG
GTGGTGTAAA ACTCGATTTT 551 GA
This corresponds to the amino acid sequence <SEQ ID 2158; ORF
664.a>:
TABLE-US-02554 a664.pep 1 VIHPHHFRAF FINGHGVEIV HLLISGGAHR
MCGRTCVFGE LVLAQQADVF 51 DTAHGAAGAV AGKFLVAEHG QPFLQRKLEP
VAAGHAVARP VVEIFVSDHG 101 FDAFKIGIGG GTAVGKDELG VKDVQTLVFH
RTHIEIAHGD DHENIQVVFQ 151 TEARFVPLHC VFXAIPRQSR PWACPLRWCK TRF*
m664/a664 92.9% identity in 183 aa overlap 10 20 30 40 50 60
m664.pep
VIHPHYFRAFFINGHGVEIVHLLIAGGAHRMGGRACVFGELVLAQQADVFDAAHGAAGAV
|||||:||||||||||||||||||:|||||| ||:||||||||||||||||:|||||||| a664
VIHPHHFRAFFINGHGVEIVHLLISGGAHRMCGRTCVFGELVLAQQADVFDTAHGAAGAV 10 20
30 40 50 60 70 80 90 100 110 120 m664.pep
AGKFLVAEHGQPFLQRKLEPVAAGYAVARPVVEILVSDHGFDAFEIGIGGGAAVGKDELG
||||||||||||||||||||||||:|||||||||:|||||||||:||||||:|||||||| a664
AGKFLVAEHGQPFLQRKLEPVAAGHAVARPVVEIFVSDHGFDAFKIGIGGGTAVGKDELG 70 80
90 100 110 120 130 140 150 160 170 180 m664.pep
VKDVQTLVFHRAHIEIAHGDDHENIQVVFQTEARFVPFHRVFXTIPRQSRPWACPLRWCK
|||||||||||:|||||||||||||||||||||||||:| |||:|||||||||||||||| a664
VKDVQTLVFHRTHIEIAHGDDHENIQVVFQTEARFVPLHCVFXAIPRQSRPWACPLRWCK 130
140 150 160 170 180 m664.pep TRFX |||| a664 TRFX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2159>:
TABLE-US-02555 g665.seq 1 atgaagtgGg acgaaacgcg cttcgGgttg
GAAtatgact tggatatttT 51 CATGGTCGTC GCCGTAGGCG ATTTCAATAT
GGGCGCGATG GAAAACAAGG 101 GTTTGAACAT TTTTAACACC AAGTTCGTCC
TCGCCGACAG CCGCACCGCC 151 ACCGATACCG ATTTCGAAGG CATTGAATCC
GTGGTCGGAC ACGAATATTT 201 CCACAACTGG ACGGGCAACC GCGTAACCTG
CCGCGACTGG TTCCAGCTTT 251 CGCTGAAGGA AGGGCTGACC GTGTTCCGCG
ACCAAGAGTT TTCCGGCGAC 301 CGCGCCGGCC GCGCCGTGCG CCGCATCGAG
AACATCCGCC TGCTGCGCCA 351 GAACCAGTTC CCCGAAGACG CAGGCCCGAC
CGCCCATCCG GTGCGCcccg 401 TCAGCTATGA GGAGATGAAC AATTTCTACA
CCATGACCGT TTATGAAAAA 451 GGCGCGGAAG TGGTGCGGAT GTATCATACC
CTGCTCGGCG AAGAGGGCTT 501 CCAAAAAGGC ATGAAGCTAT ATTTCcaacg
CCACGACGGA CAGGCAGTGA 551 CCTGCGACGA TTTCCGCGCG GCGatggcgg
ATGCGAACGG CATCAATCTC 601 GACCAGTTCG CCTTGTGGTA CAGCCAGGCG
GGCACGCCCG TTTTGGAAGC 651 CGAAGGCCGT CTGAAAAACA ATGTTTTCGA
GTTAACCATT AAACAAACCG 701 TGCCGCCCAC GCCCGATATG GCGGACAAAC
AGCCGATGAT GATTCCCGTC 751 AAAGTCGGGC TTCTGAACCG CAACGGCGAA
GCGGTGGCAT TCGATTATCA 801 GGGCAAACGC GCAACCGAAG CCGTGTTGCT
GATGACCGAA GCCGAACagg 851 CCTTCCCGCT CGAAGGTGTA ACCGAAGCCG
TCGTTCCCTC GCTGCTGCGC 901 GGGTTCAGCG CGCCAGTGTA TCTGAACTAT
CCGTACAGCG ACGACGACCT 951 GCTGCTCCTG CTCGCCCACG ACAGCGACGC
TTTCACGTGC TGGGAAGCCG 1001 CCCAAACGCT CTACCGTCGC GCCGTCGCCG
CCAACCTTGC CGCGCTTTCA 1051 GACGGCATCG GGTTGCCGAA ACACGAAAAA
CTGCTTGCCG CCGTCGAAAA 1101 AGTCATTTCA GACGACCTCT TGGACAACGC
CTTCAAAGCC CTGCTTTTGG 1151 GCGTGCCGTC CGAAGCCGAa ctGTGGGACG
GCACGGAAAA CATcgaCCCG 1201 CTGCGCTACC ATCAGGCGCG CGAAGCCTTG
TTGGATACGC TTGCCGtcCG 1251 CttcctgcCG AAATGGCACG AATTGGaccg
tcaggcggcg aagCAggaaa 1301 accaaagtTA CGAATACAGC CCCGAAACCG
CCGACTGGCG CACGCTGCGC 1351 AACGTCTGCC GCGCCTtcgt cctGCGCGCC
GACCCCGCGC acatcgAAAC 1401 TGTTGCCGAA Aaatacggcg AAATGGCGCA
AAACATGACC CACGAATGGG 1451 GCATCCTGTC CGCCGTCAAC GGCAACGAAA
GCGATACGCG CAACTGCCTG 1501 CTGGCGCAGT TTGCCGAcaa gTtttcAGAC
GACGCGCTGG TGATGGACAA 1551 ATATTTCGCC CTTATCGGCT CAAGccgccg
cagCGACACC CTGCAACAGG 1601 TTCAAACCGC CTTGCAGCAT CCGAAATTCA
GTCTCGAAAA CCCCAACAAA 1651 GCCCGTTCGC TCATCGGCAG CTTCAGCCGC
AACGTCCCGC ATTTTCACGC 1701 ACAAGACGGC AGCGGCTACC GCTTCATCGC
CGACAAAGTC ATCGAAATCG 1751 ACCGCTTCAA cCCGCAggtc gccGCCCGCC
TGGTGCAGGC GTTCAACCTC 1801 TGCAACAAGC TCGAGCCGCA CCGCAAAAAC
TTgGTGAAAC AAGAATTGCA 1851 GTGCATTCGG GCGCAGGAAG GATTGTCGAA
AGacGTGGGC GAaatcgtCG 1901 GCAAGATTTT GGGTTGA
This corresponds to the amino acid sequence <SEQ ID 2160; ORF
665.ng>:
TABLE-US-02556 g665.pep 1 MKWDETRFGL EYDLDIFMVV AVGDFNMGAM
ENKGLNIFNT KFVLADSRTA 51 TDTDFEGIES VVGHEYFHNW TGNRVTCRDW
FQLSLKEGLT VFRDQEFSGD 101 RAGRAVRRIE NIRLLRQNQF PEDAGPTAHP
VRPVSYEEMN NFYTMTVYEK 151 GAEVVRMYHT LLGEEGFQKG MKLYFQRHDG
QAVTCDDFRA AMADANGINL 201 DQFALWYSQA GTPVLEAEGR LKNNVFELTI
KQTVPPTPDM ADKQPMMIPV 251 KVGLLNRNGE AVAFDYQGKR ATEAVLLMTE
AEQAFPLEGV TEAVVPSLLR 301 GFSAPVYLNY PYSDDDLLLL LAHDSDAFTC
WEAAQTLYRR AVAANLAALS 351 DGIGLPKHEK LLAAVEKVIS DDLLDNAFKA
LLLGVPSEAE LWDGTENIDP 401 LRYHQAREAL LDTLAVRFLP KWHELDRQAA
KQENQSYEYS PETADWRTLR 451 NVCRAFVLRA DPAHIETVAE KYGEMAQNMT
HEWGILSAVN GNESDTRNCL 501 LAQFADKFSD DALVMDKYFA LIGSSRRSDT
LQQVQTALQH PKFSLENPNK 551 ARSLIGSFSR NVPHFHAQDG SGYRFIADKV
IEIDRFNPQV AARLVQAFNL 601 CNKLEPHRKN LVKQELQCIR AQEGLSKDVG
EIVGKILG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2161>:
TABLE-US-02557 m665.seq 1 ATGAAATGGG ACGAAACGCG CTTCGGTTTG
GAATACGACT TGGATATTTT 51 CATGGTCGTC GCCGTGGGCG ATTTCAATAT
GGGCGCGATG GAAAACAAGG 101 GTTTGAACAT CTTTAACACC AAGTTCGTCC
TTGCCGACAG CCGCACCGCC 151 ACCGATACCG ATTTCGAAGG CATCGAATCC
GTGGTCGGAC ACGAGTATTT 201 CCACAACTGG ACGGGCAACC GCGTAACCTG
CCGCGACTGG TTCCAGCTTT 251 CGCTGAAGGA AGGGCTGACC GTGTTCCGCG
ACCAAGAATT TTCCGGCGAC 301 CGCGCCAGCC GCGCCGTGCG CCGCATCGAA
AACATCCGCC TGCTGCGCCA 351 GCACCAGTTC CCCGAAGACG CAGGCCCGAC
CGCCCATCCG GTGCGCCCCG 401 CCAGCTATGA GGAGATGAAC AATTTCTACA
CCATGACCGT TTATGAAAAA 451 GGCGCGGAAG TAGTGCGGAT GTATCACACC
CTGCTCGGCG AAGAGGGCTT 501 CCAGAAAGGC ATGAAGCTCT ATTTCCAACG
CCACGACGGA CAGGCCGTTA 551 CCTGCGACGA TTTCCGCGCG GCGATGGCGG
ACGCGAACGG CATCAATCTC 601 GACCAGTTCG CCTTGTGGTA CAGCCAGGCG
GGCACGCCCG TTTTGGAAGC 651 GGAAGGTCGT CTGAAAAACA ATATTTTCGA
GTTGACCGTC AAACAAACCG 701 TGCCGCCCAC GCCCGATATG ACGGATAAAC
AGCCGATGAT GATTCCCGTC 751 AAGGTCGGGC TGCTGAACCG CAACGGCGAA
GCGGTGGCAT TCGACTATCA 801 GGGCAAACGC GCGACCGAAG CCGTGTTGCT
GCTGACCGAA GCCGAACAGA 851 CCTTCCTGCT CGAAGGCGTA ACCGAAGCCG
TCGTTCCCTC GCTGCTGCGC 901 GGGTTCAGCG CGCCGGTGCA TCTGAACTAT
CCGTACAGCG ACGACGACCT 951 GCTGCTCCTG CTCGCCCATG ACAGCGACGC
CTTCACGCGC TGGGAAGCCG 1001 CCCAAACGCT CTACCGCCGC GCCGTCGCCG
CCAACCTTGC CACGCTTTCA 1051 GACGGCGTTG AGCTGCCGAA ACACGAAAAA
CTGCTTGCCG CCGTCGAAAA 1101 AGTCATTTCA GACGACCTCT TAGACAACGC
CTTCAAAGCC CTGCTTTTGG 1151 GCGTGCCATC CGAAGCCGAG CTGTGGGACG
GCGCAGAAAA CATCGACCCG 1201 CTGCGCTACC ATCAGGCGCG CGAAGCCTTG
TTGGATACGC TTGCCGTCCA 1251 CTTCCTGCCG AAATGGCACG AATTGAACCG
TCAGGCGGCG AAGCAGGAAA 1301 ACCAAAGCTA CGAATACAGC CCCGAAGCCG
CCGGCTGGCG CACGCTGCGC 1351 AACGTCTGCC GCGCCTTTGT CCTGCGCGCC
GACCCCGCGC ACATCGAAAC 1401 CGTTGCCGAA AAATACGGCG AAATGGCGCA
AAACATGACC CACGAATGGG 1451 GCATCCTGTC CGCCGTCAAC GGCAACGAAA
GCGATACGCG CAACCGCCTG 1501 CTGGCGCAGT TTGCCGACAA GTTTTCAGAC
GACGCGCTGG TGATGGACAA 1551 ATATTTTGCC CTCGTCGGCT CAAGCCGCCG
CAGCGACACC CTGCAACAGG 1601 TTCGAACCGC CTTGCAGCAT CCGAAATTCA
GCCTCGAAAA CCCCAACAAA 1651 GCCCGTTCGC TCATCGGCAG CTTCAGCCGC
AACGTCCCGC ATTTCCACGC 1701 AGAAGACGGC AGCGGCTACC GCTTCATCGC
CGACAAAGTC ATCGAAATCG 1751 ACCGCTTCAA CCCGCAGGTC GCCGCCCGCT
TAGTGCAGGC GTTCAACCTC 1801 TGCAACAAGC TCGAGCCGCA CCGCAAAAAC
TTGGTGAAAC AAGCATTGCA 1851 GCGCATTCGG GCGCAGGAAG GATTGTCGAA
AGACGTGGGC GAAATCGTCG 1901 GCAAAATTTT GGATTGA
This corresponds to the amino acid sequence <SEQ ID 2162; ORF
665>:
TABLE-US-02558 m665.pep 1 MKWDETRFGL EYDLDIFMVV AVGDFNMGAM
ENKGLNIFNT KFVLADSRTA 51 TDTDFEGIES VVGHEYFHNW TGNRVTCRDW
FQLSLKEGLT VFRDQEFSGD 101 RASRAVRRIE NIRLLRQHQF PEDAGPTAHP
VRPASYEEMN NFYTMTVYEK 151 GAEVVRMYHT LLGEEGFQKG MKLYFQRHDG
QAVTCDDFRA AMADANGINL 201 DQFALWYSQA GTPVLEAEGR LKNNIFELTV
KQTVPPTPDM TDKQPMMIPV 251 KVGLLNRNGE AVAFDYQGKR ATEAVLLLTE
AEQTFLLEGV TEAVVPSLLR 301 GFSAPVHLNY PYSDDDLLLL LAHDSDAFTR
WEAAQTLYRR AVAANLATLS 351 DGVELPKHEK LLAAVEKVIS DDLLDNAFKA
LLLGVPSEAE LWDGAENIDP 401 LRYHQAREAL LDTLAVHFLP KWHELNRQAA
KQENQSYEYS PEAAGWRTLR 451 NVCRAFVLRA DPAHIETVAE KYGEMAQNMT
HEWGILSAVN GNESDTRNRL 501 LAQFADKFSD DALVMDKYFA LVGSSRRSDT
LQQVRTALQH PKFSLENPNK 551 ARSLIGSFSR NVPHFHAEDG SGYRFIADKV
IEIDRFNPQV AARLVQAFNL 601 CNKLEPHRKN LVKQALQRIR AQEGLSKDVG
EIVGKILD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02559 m665/g665 96.1% identity in 637 aa overlap 10 20 30
40 50 60 m665.pep
MKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIES
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g665
MKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIES 10 20
30 40 50 60 70 80 90 100 110 120 m665.pep
VVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQF
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||:|| g665
VVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRAGRAVRRIENIRLLRQNQF 70 80
90 100 110 120 130 140 150 160 170 180 m665.pep
PEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDG
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| g665
PEDAGPTAHPVRPVSYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDG 130
140 150 160 170 180 190 200 210 220 230 240 m665.pep
QAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRLKNNIFELTVKQTVPPTPDM
||||||||||||||||||||||||||||||||||||||||||||:||||:|||||||||| g665
QAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRLKNNVFELTIKQTVPPTPDM 190
200 210 220 230 240 250 260 270 280 290 300 m665.pep
TDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLR
:||||||||||||||||||||||||||||||||||||:|||||:| |||||||||||||| g665
ADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLMTEAEQAFPLEGVTEAVVPSLLR 250
260 270 280 290 300 310 320 330 340 350 360 m665.pep
GFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEK
||||||:|||||||||||||||||||||| |||||||||||||||||:||||: |||||| g665
GFSAPVYLNYPYSDDDLLLLLAHDSDAFTCWEAAQTLYRRAVAANLAALSDGIGLPKHEK 310
320 330 340 350 360 370 380 390 400 410 420 m665.pep
LLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLP
||||||||||||||||||||||||||||||||||:|||||||||||||||||||||:||| g665
LLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGTENIDPLRYHQAREALLDTLAVRFLP 370
380 390 400 410 420 430 440 450 460 470 480 m665.pep
KWHELNRQAAKQENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMT
|||||:||||||||||||||||:| ||||||||||||||||||||||||||||||||||| g665
KWHELDRQAAKQENQSYEYSPETADWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMT 430
440 450 460 470 480 490 500 510 520 530 540 m665.pep
HEWGILSAVNGNESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVRTALQH
|||||||||||||||||| ||||||||||||||||||||||:||||||||||||:||||| g665
HEWGILSAVNGNESDTRNCLLAQFADKFSDDALVMDKYFALIGSSRRSDTLQQVQTALQH 490
500 510 520 530 540 550 560 570 580 590 600 m665.pep
PKFSLENPNKARSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNL
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| g665
PKFSLENPNKARSLIGSFSRNVPHFHAQDGSGYRFIADKVIEIDRFNPQVAARLVQAFNL 550
560 570 580 590 600 610 620 630 639 m665.pep
CNKLEPHRKNLVKQALQRIRAQEGLSKDVGEIVGKILDX |||||||||||||| ||
||||||||||||||||||| g665 CNKLEPHRKNLVKQELQCIRAQEGLSKDVGEIVGKILGX
610 620 630
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2163>:
TABLE-US-02560 a665.seq 1 ATGAAGTGGG ACGAAACGCG CTTCGGTTTG
GAATACGACT TGGATATTTT 51 CATGGTCGTC GCCGTGGGCG ATTTCAATAT
GGGTGCGATG GAAAACAAGG 101 GTTTGAACAT CTTTAACACC AAGTTCGTCC
TTGCCGACAG CCGTACCGCC 151 ACCGATACCG ATTTTGAAGG CATCGAATCC
GTGGTCGGAC ACGAATATTT 201 CCACAACTGG ACGGGCAACC GCGTGACCTG
CCGCGACTGG TTCCAGCTTT 251 CGCTGAAGGA AGGGTTGACC GTGTTCCGCG
ACCAAGAATT TTCCGGCGAC 301 CGCGCCAGCC GCGCCGTGCG CCGTATCGAA
AACATCCGCC TGCTGCGCCA 351 GCACCAGTTC CCCGAAGACG CAGGTCCGAC
CGCACATCCG GTGCGCCCCG 401 CCCGATATGA GGAGATGAAC AATTTCTACA
CCATGACCGT TTATGAAAAA 451 GGCGCGGAAG TGGTGCGGAT GTATCACACC
TTGCTCGGCG AAGAGGGCTT 501 CCAAAAAGGT ATGAAGCTCT ATTTCCAACG
CCACGACGGA CAGGCTGTTA 551 CCTGCGACGA TTTCCGCGCG GCGATGGTGG
ACGCGAACGG CATCAACCTC 601 GACCAATTCG CCTTGTGGTA CAGCCAAGCA
GGTACGCCGG TTTTAGATGC 651 TCAAGGGCGT CTGAAAAACA ATGTGTTCGA
GTTAACCATC AAACAAACCG 701 TGCCGCCCAC GCCCGATATG GCGGACAAAC
AGCCGATGAT GATTCCCGTC 751 AAAATCGGGC TGCTGAACTG CAACGGCGAA
GCGGTGGCAT TTGATTATCA 801 GGGCAAACGC GCGACCGAAG CCGTGTTGCT
GCTGACCGAA GCCGAACAGA 851 CCTTCCAGTT CGAAAGCGTA ACCGAAGCCG
TCGTTCCCTC GCTGCTGCGC 901 GGGTTCAGCG CGCCGGTGCA TCTGAACTAT
CCGTACAGCG ACGACGACCT 951 GCTGCTTCTG CTCGCCCATG ACAGCGACGC
CTTCACGCGC TGGGAAGCCG 1001 CACAAACGCT CTACCGCCGT GCCGTCGCCG
CCAACCTTGC CGCGCTTTCA 1051 GACGGCGTCG AGTTGCCGAA ACACGAAAAA
CTGCTTGCCG CCGTCGAAAA 1101 AGTCATTTCA GACGACCTCT TAGACAACGC
TTTCAAAGCC CTGCTTTTGG 1151 GTGTGCCGTC TGAAGCCGAG CTGTGGGACG
GCGCGGAAAA CATCGACCCG 1201 CTGCGCTACC ATCAGGCGCG CGAAGCCTTG
TTGGATATAC TTGCCGTCCG 1251 CTTTCTGCCG AAATGGCACG AATTGAACCG
TCAGGCGGCG AAGCAGGAAA 1301 ACCAAAGCTA CGAGTACAGC CCCGAAGCCG
CCGGTTGGCG CACGCTGCGC 1351 AATGTCTGCC GCGCCTTCGT CCTGCGCGCC
GATCCCGCGC ACATCGAAAC 1401 CGTTGCCGAG AAATACGCCG AAATGGCGCA
AAACATGACC CACGAATGGG 1451 GCATCCTGTC CGCCGTCAAC GGCAACGAAA
GCGATACGCG CAACCGCCTG 1501 CTGGCGCAGT TTGCCGACAA GTTTTCAGAC
GACGCGCTGG TGATGGACAA 1551 ATATTTCGCC CTCGTCGGCT CAAGCCGCCG
CAGCGACACC CTGCAACAGG 1601 TTCAAACCGC CTTGCAGCAT CCGAAGTTCA
GCCTCGAAAA TCCCAACAAA 1651 GCCCGCTCGC TCATCGGCAG CTTCAGCCGC
AACGTCCCGC ATTTCCACGC 1701 AGAAGACGGC AGCGGCTACC GCTTCATCGC
CGACAAAGTC ATCGAAATCG 1751 ACCGCTTTAA CCCGCAGGTC GCCGCCCGCC
TGGTGCAGGC GTTCAACCTC 1801 TGCAACAAGC TCGAGCCGCA CCGCAAAAAC
TTGGTGAAAC AAGCATTGCA 1851 GCGCATTCGG GCGCAGGAAG GATTGTCGAA
AGACGTGGGC GAAATCGTCG 1901 GCAAAATTTT GGATTGA
This corresponds to the amino acid sequence <SEQ ID 2164; ORF
665.a>:
TABLE-US-02561 a665.pep 1 MKWDETRFGL EYDLDIFMVV AVGDFNMGAM
ENKGLNIFNT KFVLADSRTA 51 TDTDFEGIES VVGHEYFHNW TGNRVTCRDW
FQLSLKEGLT VFRDQEFSGD 101 RASRAVRRIE NIRLLRQHQF PEDAGPTAHP
VRPARYEEMN NFYTMTVYEK 151 GAEVVRMYHT LLGEEGFQKG MKLYFQRHDG
QAVTCDDFRA AMVDANGINL 201 DQFALWYSQA GTPVLDAQGR LKNNVFELTI
KQTVPPTPDM ADKQPMMIPV 251 KIGLLNCNGE AVAFDYQGKR ATEAVLLLTE
AEQTFQFESV TEAVVPSLLR 301 GFSAPVHLNY PYSDDDLLLL LAHDSDAFTR
WEAAQTLYRR AVAANLAALS 351 DGVELPKHEK LLAAVEKVIS DDLLDNAFKA
LLLGVPSEAE LWDGAENIDP 401 LRYHQAREAL LDILAVRFLP KWHELNRQAA
KQENQSYEYS PEAAGWRTLR 451 NVCRAFVLRA DPAHIETVAE KYAEMAQNMT
HEWGILSAVN GNESDTRNRL 501 LAQFADKFSD DALVMDKYFA LVGSSRRSDT
LQQVQTALQH PKFSLENPNK 551 ARSLIGSFSR NVPHFHAEDG SGYRFIADKV
IEIDRFNPQV AARLVQAFNL 601 CNKLEPHRKN LVKQALQRIR AQEGLSKDVG
EIVGKILD* m665/a665 97.3% identity in 638 aa overlap 10 20 30 40 50
60 m665.pep
MKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIES
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a665
MKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIES 10 20
30 40 50 60 70 80 90 100 110 120 m665.pep
VVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a665
VVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQF 70 80
90 100 110 120 130 140 150 160 170 180 m665.pep
PEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDG
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| a665
PEDAGPTAHPVRPARYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDG 130
140 150 160 170 180 190 200 210 220 230 240 m665.pep
QAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRLKNNIFELTVKQTVPPTPDM
||||||||||||:||||||||||||||||||||||:|:||||||:||||:|||||||||| a665
QAVTCDDFRAAMVDANGINLDQFALWYSQAGTPVLDAQGRLKNNVFELTIKQTVPPTPDM 190
200 210 220 230 240 250 260 270 280 290 300 m665.pep
TDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLR
:||||||||||:|||| |||||||||||||||||||||||||||| :|:||||||||||| a665
ADKQPMMIPVKIGLLNCNGEAVAFDYQGKRATEAVLLLTEAEQTFQFESVTEAVVPSLLR 250
260 270 280 290 300 310 320 330 340 350 360 m665.pep
GFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEK
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| a665
GFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLAALSDGVELPKHEK 310
320 330 340 350 360 370 380 390 400 410 420 m665.pep
LLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLP
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||:||| a665
LLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDILAVRFLP 370
380 390 400 410 420 430 440 450 460 470 480 m665.pep
KWHELNRQAAKQENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMT
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| a665
KWHELNRQAAKQENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYAEMAQNMT 430
440 450 460 470 480 490 500 510 520 530 540 m665.pep
HEWGILSAVNGNESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVRTALQH
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a665
HEWGILSAVNGNESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVQTALQH 490
500 510 520 530 540 550 560 570 580 590 600 m665.pep
PKFSLENPNKARSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a665
PKFSLENPNKARSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNL 550
560 570 580 590 600 610 620 630 639 m665.pep
CNKLEPHRKNLVKQALQRIRAQEGLSKDVGEIVGKILDX
||||||||||||||||||||||||||||||||||||||| a665
CNKLEPHRKNLVKQALQRIRAQEGLSKDVGEIVGKILDX 610 620 630
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2165>:
TABLE-US-02562 g665-1.seq 1 ATGAGCAAAA CCGTCCGTTA TCTGAAAGAT
TACCAAACGC CTGCCTACCG 51 CATTCTTGAA ACCGAACTGC ATTTCGACAT
TGCCGAACCG CAAACCGTCG 101 TGAAGTCGCG TTTGACGGTC GAGCCGCAGA
GGGCGGGCGA GCCGCTGGTG 151 TTGGACGGTT CGGCAAAACT CTTGTCCGTC
AAAATCAACG GCGCGGCGGC 201 GGATTATGTG TTGGAAGGCG AGACGCTGAC
GATTGCAGAC GTACCGTCCG 251 AACGCTTCAC CGTCGAAGTG GAAACCGAAA
TCCTGCCGGC GGAAAACAAA 301 TCGCTGATGG GGCTGTATGC TTCCGGCGGC
AATCTGTTTA CCCAGTGCGA 351 GCCGGAGGGC TTCCGCAAAA TCACGTTCTA
CATCGACCGT CCGGATGTGA 401 TGTCCAAGTT CACGACCACC ATCGTCGCGG
ACAAAAAACG CTATCCCGTT 451 TTGCTTTCCA ACGGCAACAA AATCGACGGC
GGCGAGTTTT CAGACGGCCG 501 CCATTGGGTG AAATGGGAAG ACCCGTTTGC
CAAACCGAGT TATCTGTTTG 551 CTTTGGTCGC GGGCGATTTG GCGGTAACGG
AAGACCGTTT CACCACCATG 601 AGCGGCAGAA ACGTCAAAAT CGAGTTTTAC
ACCACCGAAG CGGACAAACC 651 CAAGGTCGGC TTTGCCGTGG AATCGTTGAA
AAACGCGATG AAGTGGGACG 701 AAACGCGCTT CGGGTTGGAA TATGACTTGG
ATATTTTCAT GGTCGTCGCC 751 GTAGGCGATT TCAATATGGG CGCGATGGAA
AACAAGGGTT TGAACATTTT 801 TAACACCAAG TTCGTCCTCG CCGACAGCCG
CACCGCCACC GATACCGATT 851 TCGAAGGCAT TGAATCCGTG GTCGGACACG
AATATTTCCA CAACTGGACG 901 GGCAACCGCG TAACCTGCCG CGACTGGTTC
CAGCTTTCGC TGAAGGAAGG 951 GCTGACCGTG TTCCGCGACC AAGAGTTTTC
CGGCGACCGC GCCGGCCGCG 1001 CCGTGCGCCG CATCGAGAAC ATCCGCCTGC
TGCGCCAGAA CCAGTTCCCC 1051 GAAGACGCAG GCCCGACCGC CCATCCGGTG
CGCCCCGTCA GCTATGAGGA 1101 GATGAACAAT TTCTACACCA TGACCGTTTA
TGAAAAAGGC GCGGAAGTGG 1151 TGCGGATGTA TCATACCCTG CTCGGCGAAG
AGGGCTTCCA AAAAGGCATG 1201 AAGCTATATT TCCAACGCCA CGACGGACAG
GCAGTGACCT GCGACGATTT 1251 CCGCGCGGCG ATGGCGGATG CGAACGGCAT
CAATCTCGAC CAGTTCGCCT 1301 TGTGGTACAG CCAGGCGGGC ACGCCCGTTT
TGGAAGCCGA AGGCCGTCTG 1351 AAAAACAATG TTTTCGAGTT AACCATTAAA
CAAACCGTGC CGCCCACGCC 1401 CGATATGGCG GACAAACAGC CGATGATGAT
TCCCGTCAAA GTCGGGCTTC 1451 TGAACCGCAA CGGCGAAGCG GTGGCATTCG
ATTATCAGGG CAAACGCGCA 1501 ACCGAAGCCG TGTTGCTGAT GACCGAAGCC
GAACAGGCCT TCCCGCTCGA 1551 AGGTGTAACC GAAGCCGTCG TTCCCTCGCT
GCTGCGCGGG TTCAGCGCGC 1601 CAGTGTATCT GAACTATCCG TACAGCGACG
ACGACCTGCT GCTCCTGCTC 1651 GCCCACGACA GCGACGCTTT CACGTGCTGG
GAAGCCGCCC AAACGCTCTA 1701 CCGTCGCGCC GTCGCCGCCA ACCTTGCCGC
GCTTTCAGAC GGCATCGGGT 1751 TGCCGAAACA CGAAAAACTG CTTGCCGCCG
TCGAAAAAGT CATTTCAGAC 1801 GACCTCTTGG ACAACGCCTT CAAAGCCCTG
CTTTTGGGCG TGCCGTCCGA 1851 AGCCGAACTG TGGGACGGCA CGGAAAACAT
CGACCCGCTG CGCTACCATC 1901 AGGCGCGCGA AGCCTTGTTG GATACGCTTG
CCGTCCGCTT CCTGCCGAAA 1951 TGGCACGAAT TGGACCGTCA GGCGGCGAAG
CAGGAAAACC AAAGTTACGA 2001 ATACAGCCCC GAAACCGCCG ACTGGCGCAC
GCTGCGCAAC GTCTGCCGCG 2051 CCTTCGTCCT GCGCGCCGAC CCCGCGCACA
TCGAAACTGT TGCCGAAAAA 2101 TACGGCGAAA TGGCGCAAAA CATGACCCAC
GAATGGGGCA TCCTGTCCGC 2151 CGTCAACGGC AACGAAAGCG ATACGCGCAA
CTGCCTGCTG GCGCAGTTTG 2201 CCGACAAGTT TTCAGACGAC GCGCTGGTGA
TGGACAAATA TTTCGCCCTT 2251 ATCGGCTCAA GCCGCCGCAG CGACACCCTG
CAACAGGTTC AAACCGCCTT 2301 GCAGCATCCG AAATTCAGTC TCGAAAACCC
CAACAAAGCC CGTTCGCTCA 2351 TCGGCAGCTT CAGCCGCAAC GTCCCGCATT
TTCACGCACA AGACGGCAGC 2401 GGCTACCGCT TCATCGCCGA CAAAGTCATC
GAAATCGACC GCTTCAACCC 2451 GCAGGTCGCC GCCCGCCTGG TGCAGGCGTT
CAACCTCTGC AACAAGCTCG 2501 AGCCGCACCG CAAAAACTTG GTGAAACAAG
AATTGCAGTG CATTCGGGCG 2551 CAGGAAGGAT TGTCGAAAGA CGTGGGCGAA
ATCGTCGGCA AGATTTTGGG 2601 TTGA
This corresponds to the amino acid sequence <SEQ ID 2166; ORF
665-1.ng>:
TABLE-US-02563 g665-1.pep 1 MSKTVRYLKD YQTPAYRILE TELHFDIAEP
QTVVKSRLTV EPQRAGEPLV 51 LDGSAKLLSV KINGAAADYV LEGETLTIAD
VPSERFTVEV ETEILPAENK 101 SLMGLYASGG NLFTQCEPEG FRKITFYIDR
PDVMSKFTTT IVADKKRYPV 151 LLSNGNKIDG GEFSDGRHWV KWEDPFAKPS
YLFALVAGDL AVTEDRFTTM 201 SGRNVKIEFY TTEADKPKVG FAVESLKNAM
KWDETRFGLE YDLDIFMVVA 251 VGDFNMGAME NKGLNIFNTK FVLADSRTAT
DTDFEGIESV VGHEYFHNWT 301 GNRVTCRDWF QLSLKEGLTV FRDQEFSGDR
AGRAVRRIEN IRLLRQNQFP 351 EDAGPTAHPV RPVSYEEMNN FYTMTVYEKG
AEVVRMYHTL LGEEGFQKGM 401 KLYFQRHDGQ AVTCDDFRAA MADANGINLD
QFALWYSQAG TPVLEAEGRL 451 KNNVFELTIK QTVPPTPDMA DKQPMMIPVK
VGLLNRNGEA VAFDYQGKRA 501 TEAVLLMTEA EQAFPLEGVT EAVVPSLLRG
FSAPVYLNYP YSDDDLLLLL 551 AHDSDAFTCW EAAQTLYRRA VAANLAALSD
GIGLPKHEKL LAAVEKVISD 601 DLLDNAFKAL LLGVPSEAEL WDGTENIDPL
RYHQAREALL DTLAVRFLPK 651 WHELDRQAAK QENQSYEYSP ETADWRTLRN
VCRAFVLRAD PAHIETVAEK 701 YGEMAQNMTH EWGILSAVNG NESDTRNCLL
AQFADKFSDD ALVMDKYFAL 751 IGSSRRSDTL QQVQTALQHP KFSLENPNKA
RSLIGSFSRN VPHFHAQDGS 801 GYRFIADKVI EIDRFNPQVA ARLVQAFNLC
NKLEPHRKNL VKQELQCIRA 851 QEGLSKDVGE IVGKILG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2167>:
TABLE-US-02564 m665-1.seq 1 ATGAGCAAAA CCGTGCATTA TCTCAAAGAC
TATCAAACGC CCGCCTACCA 51 TATTCTCAAA ACCGATTTAC ATTTTGATAT
TAATGAACCG CAAACCGTCG 101 TGAAGTCGCG TTTGACGGTT GAGCCGCAGA
GGGTAGGGGA GCCGCTGGTG 151 TTGGACGGTT CGGCGAAACT CTTGTCCGTC
AAAATCAACG GGGCGGCGGC 201 GGATTATGTG TTGGAAGGAG AGACGCTGAC
GATTGCGGGC GTGCCGTCCG 251 AACGCTTCAC CGTCGAAGTG GAAACCGAAA
TCCTGCCGGC GGAAAACAAA 301 TCGCTGATGG GGCTGTATGC TTCCGGCGGC
AATTTGTTTA CCCAGTGCGA 351 GCCGGAGGGC TTCCGCAAAA TCACATTTTA
CATCGACCGT CCGGATGTGA 401 TGTCCAAGTT CACCACCACC ATCGTCGCCG
ACAAAAAACG CTATCCCGTT 451 TTGCTTTCCA ACGGCAACAA AATCGACGGC
GGCGAGTTTT CAGACGGCCG 501 CCATTGGGTG AAATGGGAAG ACCCGTTTTC
CAAACCGAGC TATCTGTTTG 551 CTTTGGTCGC GGGCGATTTG GCGGTAACGG
AAGACTATTT CACCACCATG 601 AGCGGCAGAA ACGTCAAAAT CGAGTTTTAC
ACCACCGAAG CGGACAAGCC 651 CAAGGTCGGC TTTGCCGTGG AATCGTTGAA
AAACGCGATG AAATGGGACG 701 AAACGCGCTT CGGTTTGGAA TACGACTTGG
ATATTTTCAT GGTCGTCGCC 751 GTGGGCGATT TCAATATGGG CGCGATGGAA
AACAAGGGTT TGAACATCTT 801 TAACACCAAG TTCGTCCTTG CCGACAGCCG
CACCGCCACC GATACCGATT 851 TCGAAGGCAT CGAATCCGTG GTCGGACACG
AGTATTTCCA CAACTGGACG 901 GGCAACCGCG TAACCTGCCG CGACTGGTTC
CAGCTTTCGC TGAAGGAAGG 951 GCTGACCGTG TTCCGCGACC AAGAATTTTC
CGGCGACCGC GCCAGCCGCG 1001 CCGTGCGCCG CATCGAAAAC ATCCGCCTGC
TGCGCCAGCA CCAGTTCCCC 1051 GAAGACGCAG GCCCGACCGC CCATCCGGTG
CGCCCCGCCA GCTATGAGGA 1101 GATGAACAAT TTCTACACCA TGACCGTTTA
TGAAAAAGGC GCGGAAGTAG 1151 TGCGGATGTA TCACACCCTG CTCGGCGAAG
AGGGCTTCCA GAAAGGCATG 1201 AAGCTCTATT TCCAACGCCA CGACGGACAG
GCCGTTACCT GCGACGATTT 1251 CCGCGCGGCG ATGGCGGACG CGAACGGCAT
CAATCTCGAC CAGTTCGCCT 1301 TGTGGTACAG CCAGGCGGGC ACGCCCGTTT
TGGAAGCGGA AGGTCGTCTG 1351 AAAAACAATA TTTTCGAGTT GACCGTCAAA
CAAACCGTGC CGCCCACGCC 1401 CGATATGACG GATAAACAGC CGATGATGAT
TCCCGTCAAG GTCGGGCTGC 1451 TGAACCGCAA CGGCGAAGCG GTGGCATTCG
ACTATCAGGG CAAACGCGCG 1501 ACCGAAGCCG TGTTGCTGCT GACCGAAGCC
GAACAGACCT TCCTGCTCGA 1551 AGGCGTAACC GAAGCCGTCG TTCCCTCGCT
GCTGCGCGGG TTCAGCGCGC 1601 CGGTGCATCT GAACTATCCG TACAGCGACG
ACGACCTGCT GCTCCTGCTC 1651 GCCCATGACA GCGACGCCTT CACGCGCTGG
GAAGCCGCCC AAACGCTCTA 1701 CCGCCGCGCC GTCGCCGCCA ACCTTGCCAC
GCTTTCAGAC GGCGTTGAGC 1751 TGCCGAAACA CGAAAAACTG CTTGCCGCCG
TCGAAAAAGT CATTTCAGAC 1801 GACCTCTTAG ACAACGCCTT CAAAGCCCTG
CTTTTGGGCG TGCCATCCGA 1851 AGCCGAGCTG TGGGACGGCG CAGAAAACAT
CGACCCGCTG CGCTACCATC 1901 AGGCGCGCGA AGCCTTGTTG GATACGCTTG
CCGTCCACTT CCTGCCGAAA 1951 TGGCACGAAT TGAACCGTCA GGCGGCGAAG
CAGGAAAACC AAAGCTACGA 2001 ATACAGCCCC GAAGCCGCCG GCTGGCGCAC
GCTGCGCAAC GTCTGCCGCG 2051 CCTTTGTCCT GCGCGCCGAC CCCGCGCACA
TCGAAACCGT TGCCGAAAAA 2101 TACGGCGAAA TGGCGCAAAA CATGACCCAC
GAATGGGGCA TCCTGTCCGC 2151 CGTCAACGGC AACGAAAGCG ATACGCGCAA
CCGCCTGCTG GCGCAGTTTG 2201 CCGACAAGTT TTCAGACGAC GCGCTGGTGA
TGGACAAATA TTTTGCCCTC 2251 GTCGGCTCAA GCCGCCGCAG CGACACCCTG
CAACAGGTTC GAACCGCCTT 2301 GCAGCATCCG AAATTCAGCC TCGAAAACCC
CAACAAAGCC CGTTCGCTCA 2351 TCGGCAGCTT CAGCCGCAAC GTCCCGCATT
TCCACGCAGA AGACGGCAGC 2401 GGCTACCGCT TCATCGCCGA CAAAGTCATC
GAAATCGACC GCTTCAACCC 2451 GCAGGTCGCC GCCCGCTTAG TGCAGGCGTT
CAACCTCTGC AACAAGCTCG 2501 AGCCGCACCG CAAAAACTTG GTGAAACAAG
CATTGCAGCG CATTCGGGCG 2551 CAGGAAGGAT TGTCGAAAGA CGTGGGCGAA
ATCGTCGGCA AAATTTTGGA 2601 TTGA
This corresponds to the amino acid sequence <SEQ ID 2168; ORF
665-1>:
TABLE-US-02565 m665-1.pep 1 MSKTVHYLKD YQTPAYHILK TDLHFDINEP
QTVVKSRLTV EPQRVGEPLV 51 LDGSAKLLSV KINGAAADYV LEGETLTIAG
VPSERFTVEV ETEILPAENK 101 SLMGLYASGG NLFTQCEPEG FRKITFYIDR
PDVMSKFTTT IVADKKRYPV 151 LLSNGNKIDG GEFSDGRHWV KWEDPFSKPS
YLFALVAGDL AVTEDYFTTM 201 SGRNVKIEFY TTEADKPKVG FAVESLKNAM
KWDETRFGLE YDLDIFMVVA 251 VGDFNMGAME NKGLNIFNTK FVLADSRTAT
DTDFEGIESV VGHEYFHNWT 301 GNRVTCRDWF QLSLKEGLTV FRDQEFSGDR
ASRAVRRIEN IRLLRQHQFP 351 EDAGPTAHPV RPASYEEMNN FYTMTVYEKG
AEVVRMYHTL LGEEGFQKGM 401 KLYFQRHDGQ AVTCDDFRAA MADANGINLD
QFALWYSQAG TPVLEAEGRL 451 KNNIFELTVK QTVPPTPDMT DKQPMMIPVK
VGLLNRNGEA VAFDYQGKRA 501 TEAVLLLTEA EQTFLLEGVT EAVVPSLLRG
FSAPVHLNYP YSDDDLLLLL 551 AHDSDAFTRW EAAQTLYRRA VAANLATLSD
GVELPKHEKL LAAVEKVISD 601 DLLDNAFKAL LLGVPSEAEL WDGAENIDPL
RYHQAREALL DTLAVHFLPK 651 WHELNRQAAK QENQSYEYSP EAAGWRTLRN
VCRAFVLRAD PAHIETVAEK 701 YGEMAQNMTH EWGILSAVNG NESDTRNRLL
AQFADKFSDD ALVMDKYFAL 751 VGSSRRSDTL QQVRTALQHP KFSLENPNKA
RSLIGSFSRN VPHFHAEDGS 801 GYRFIADKVI EIDRFNPQVA ARLVQAFNLC
NKLEPHRKNL VKQALQRIRA 851 QEGLSKDVGE IVGKILD* m665-1/g665-1 96.1%
identity in 866 aa overlap 10 20 30 40 50 60 m665-1.pep
MSKTVHYLKDYQTPAYHILKTDLHFDINEPQTVVKSRLTVEPQRVGEPLVLDGSAKLLSV
|||||:||||||||||:||:|:||||| ||||||||||||||||:||||||||||||||| g665-1
MSKTVRYLKDYQTPAYRILETELHFDIAEPQTVVKSRLTVEPQRAGEPLVLDGSAKLLSV 10 20
30 40 50 60 70 80 90 100 110 120 m665-1.pep
KINGAAADYVLEGELLTIAGVPSERFTVEVETEILPAENKSLMGLYASGGNLFTQCEPEG
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| g665-1
KINGAAADYVLEGELLTIADVPSERFTVEVETEILPAENKSLMGLYASGGNLFTQCEPEG 70 80
90 100 110 120 130 140 150 160 170 180 m665-1.pep
FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPS
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| g665-1
FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFAKPS 130
140 150 160 170 180 190 200 210 220 230 240 m665-1.pep
YLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLE
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| g665-1
YLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLE 190
200 210 220 230 240 250 260 270 280 290 300 m665-1.pep
YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g665-1
YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT 250
260 270 280 290 300 310 320 330 340 350 360 m665-1.pep
GNRVTCRDWFQLSLKEGLTVERDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV
|||||||||||||||||||||||||||||||:||||||||||||||:||||||||||||| g665-1
GNRVTCRDWFQLSLKEGLTVERDQEFSGDRAGRAVRRIENIRLLRQNQFPEDAGPTAHPV 310
320 330 340 350 360 370 380 390 400 410 420 m665-1.pep
RPASYEEMNITFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA
||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g665-1
RPVSYEEMNITFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA 370
380 390 400 410 420 430 440 450 460 470 480 m665-1.pep
MADANGINLDQFALWYSQAGTPVLEAEGRLKNNIFELTVKQTVPPTPDMTDKQPMMIPVK
|||||||||||||||||||||||||||||||||:||||:||||||||||:|||||||||| g665-1
MADANGINLDQFALWYSQAGTPVLEAEGRLKNNVFELTIKQTVPPTPDMADKQPMMIPVK 430
440 450 460 470 480 490 500 510 520 530 540 m665-1.pep
VGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLRGFSAPVHLNYP
||||||||||||||||||||||||||:|||||:| ||||||||||||||||||||:|||| g665-1
VGLLNRNGEAVAFDYQGKRATEAVLLMTEAEQAFPLEGVTEAVVPSLLRGFSAPVYLNYP 490
500 510 520 530 540 550 560 570 580 590 600 m665-1.pep
YSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISD
|||||||||||||||||| |||||||||||||||||:||||: ||||||||||||||||| g665-1
YSDDDLLLLLAHDSDAFTCWEAAQTLYRRAVAANLAALSDGIGLPKHEKLLAAVEKVISD 550
560 570 580 590 600 610 620 630 640 650 660 m665-1.pep
DLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAK
|||||||||||||||||||||||:|||||||||||||||||||||:||||||||:||||| g665-1
DLLDNAFKALLLGVPSEAELWDGTENIDPLRYHQAREALLDTLAVRFLPKWHELDRQAAK 610
620 630 640 650 660 670 680 690 700 710 720 m665-1.pep
QENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNG
|||||||||||:| |||||||||||||||||||||||||||||||||||||||||||||| g665-1
QENQSYEYSPETADWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNG 670
680 690 700 710 720 730 740 750 760 770 780 m665-1.pep
NESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVRTALQHPKFSLENPNKA
||||||| ||||||||||||||||||||||:||||||||||||:|||||||||||||||| g665-1
NESDTRNCLLAQFADKFSDDALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKA 730
740 750 760 770 780 790 800 810 820 830 840 m665-1.pep
RSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g665-1
RSLIGSFSRNVPHFHAQDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL 790
800 810 820 830 840 850 860 m665-1.pep VKQALQRIRAQEGLSKDVGEIVGKILDX
||| || ||||||||||||||||||| g665-1 VKQELQCIRAQEGLSKDVGEIVGKILGX 850
860
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2169>:
TABLE-US-02566 a665-1.seq 1 ATGAGCAAAA CCGTGCATTA TCTCAAAGAC
TATCAAACGC CCGCCTACCA 51 TATTCTCAAA ACCGATTTAC ATTTTGATAT
TAACGAACCG CAAACCATTG 101 TGAAGTCGCG TTTGACGGTC GAGCCGAAGA
GGGTGGGAGA GCCGCTGGTG 151 TTGGACGGTT CGGCGAAACT CTTGTCCGTC
AAAATCAACG GCGTGGCGGC 201 GGATTATGTG TTGGAAGGCG AGACGCTGAC
GATTGCGGAC GTGCCGTCCG 251 AACGCTTCAC CGTCGAAGTG GAAACCGAAA
TCCTGCCGGC GGAAAACAAA 301 TCGCTGATGG GGCTGTATGC GTCCGCCGGT
AACCTGTTTA CCCAGTGCGA 351 GCCGGAGGGC TTCCGCAAAA TCACGTTCTA
TATCGACCGT CCGGATGTCA 401 TGTCCAAGTT CACGACCACC ATCGTCGCGG
ACAAAAAACG CTATCCCGTT 451 TTGCTCTCCA ACGGCAACAA AATCGACGGC
GGCGAGTATT CAGACGGCCG 501 CCATTGGGTG AAATGGGAAG ACCCGTTTGC
CAAACCGAGT TATCTGTTTG 551 CTTTGGTCGC GGGCGATTTG GCGGTCACGG
AAGACTATTT CACCACCATG 601 AGCGGCAGAA ACGTCAAAAT CGAGTTTTAC
ACCACCGAAG CGGACAAGCC 651 CAAGGTCGGC TTTGCCGTGG AATCGCTGAA
AAACGCAATG AAGTGGGACG 701 AAACGCGCTT CGGTTTGGAA TACGACTTGG
ATATTTTCAT GGTCGTCGCC 751 GTGGGCGATT TCAATATGGG TGCGATGGAA
AACAAGGGTT TGAACATCTT 801 TAACACCAAG TTCGTCCTTG CCGACAGCCG
TACCGCCACC GATACCGATT 851 TTGAAGGCAT CGAATCCGTG GTCGGACACG
AATATTTCCA CAACTGGACG 901 GGCAACCGCG TGACCTGCCG CGACTGGTTC
CAGCTTTCGC TGAAGGAAGG 951 GTTGACCGTG TTCCGCGACC AAGAATTTTC
CGGCGACCGC GCCAGCCGCG 1001 CCGTGCGCCG TATCGAAAAC ATCCGCCTGC
TGCGCCAGCA CCAGTTCCCC 1051 GAAGACGCAG GTCCGACCGC ACATCCGGTG
CGCCCCGCCC GATATGAGGA 1101 GATGAACAAT TTCTACACCA TGACCGTTTA
TGAAAAAGGC GCGGAAGTGG 1151 TGCGGATGTA TCACACCTTG CTCGGCGAAG
AGGGCTTCCA AAAAGGTATG 1201 AAGCTCTATT TCCAACGCCA CGACGGACAG
GCTGTTACCT GCGACGATTT 1251 CCGCGCGGCG ATGGTGGACG CGAACGGCAT
CAACCTCGAC CAATTCGCCT 1301 TGTGGTACAG CCAAGCAGGT ACGCCGGTTT
TAGATGCTCA AGGGCGTCTG 1351 AAAAACAATG TGTTCGAGTT AACCATCAAA
CAAACCGTGC CGCCCACGCC 1401 CGATATGGCG GACAAACAGC CGATGATGAT
TCCCGTCAAA ATCGGGCTGC 1451 TGAACTGCAA CGGCGAAGCG GTGGCATTTG
ATTATCAGGG CAAACGCGCG 1501 ACCGAAGCCG TGTTGCTGCT GACCGAAGCC
GAACAGACCT TCCAGTTCGA 1551 AAGCGTAACC GAAGCCGTCG TTCCCTCGCT
GCTGCGCGGG TTCAGCGCGC 1601 CGGTGCATCT GAACTATCCG TACAGCGACG
ACGACCTGCT GCTTCTGCTC 1651 GCCCATGACA GCGACGCCTT CACGCGCTGG
GAAGCCGCAC AAACGCTCTA 1701 CCGCCGTGCC GTCGCCGCCA ACCTTGCCGC
GCTTTCAGAC GGCGTCGAGT 1751 TGCCGAAACA CGAAAAACTG CTTGCCGCCG
TCGAAAAAGT CATTTCAGAC 1801 GACCTCTTAG ACAACGCTTT CAAAGCCCTG
CTTTTGGGTG TGCCGTCTGA 1851 AGCCGAGCTG TGGGACGGCG CGGAAAACAT
CGACCCGCTG CGCTACCATC 1901 AGGCGCGCGA AGCCTTGTTG GATATACTTG
CCGTCCGCTT TCTGCCGAAA 1951 TGGCACGAAT TGAACCGTCA GGCGGCGAAG
CAGGAAAACC AAAGCTACGA 2001 GTACAGCCCC GAAGCCGCCG GTTGGCGCAC
GCTGCGCAAT GTCTGCCGCG 2051 CCTTCGTCCT GCGCGCCGAT CCCGCGCACA
TCGAAACCGT TGCCGAGAAA 2101 TACGCCGAAA TGGCGCAAAA CATGACCCAC
GAATGGGGCA TCCTGTCCGC 2151 CGTCAACGGC AACGAAAGCG ATACGCGCAA
CCGCCTGCTG GCGCAGTTTG 2201 CCGACAAGTT TTCAGACGAC GCGCTGGTGA
TGGACAAATA TTTCGCCCTC 2251 GTCGGCTCAA GCCGCCGCAG CGACACCCTG
CAACAGGTTC AAACCGCCTT 2301 GCAGCATCCG AAGTTCAGCC TCGAAAATCC
CAACAAAGCC CGCTCGCTCA 2351 TCGGCAGCTT CAGCCGCAAC GTCCCGCATT
TCCACGCAGA AGACGGCAGC 2401 GGCTACCGCT TCATCGCCGA CAAAGTCATC
GAAATCGACC GCTTTAACCC 2451 GCAGGTCGCC GCCCGCCTGG TGCAGGCGTT
CAACCTCTGC AACAAGCTCG 2501 AGCCGCACCG CAAAAACTTG GTGAAACAAG
CATTGCAGCG CATTCGGGCG 2551 CAGGAAGGAT TGTCGAAAGA CGTGGGCGAA
ATCGTCGGCA AAATTTTGGA 2601 TTGA
This corresponds to the amino acid sequence <SEQ ID 2170; ORF
665-1.a>:
TABLE-US-02567 a665-1.pep 1 MSKTVHYLKD YQTPAYHILK TDLHFDINEP
QTIVKSRLTV EPKRVGEPLV 51 LDGSAKLLSV KINGVAADYV LEGETLTIAD
VPSERFTVEV ETEILPAENK 101 SLMGLYASAG NLFTQCEPEG FRKITFYIDR
PDVMSKFTTT IVADKKRYPV 151 LLSNGNKIDG GEYSDGRHWV KWEDPFAKPS
YLFALVAGDL AVTEDYFTTM 201 SGRNVKIEFY TTEADKPKVG FAVESLKNAM
KWDETRFGLE YDLDIFMVVA 251 VGDFNMGAME NKGLNIFNTK FVLADSRTAT
DTDFEGIESV VGHEYFHNWT 301 GNRVTCRDWF QLSLKEGLTV FRDQEFSGDR
ASRAVRRIEN IRLLRQHQFP 351 EDAGPTAHPV RPARYEEMNN FYTMTVYEKG
AEVVRMYHTL LGEEGFQKGM 401 KLYFQRHDGQ AVTCDDFRAA MVDANGINLD
QFALWYSQAG TPVLDAQGRL 451 KNNVFELTIK QTVPPTPDMA DKQPMMIPVK
IGLLNCNGEA VAFDYQGKRA 501 TEAVLLLTEA EQTFQFESVT EAVVPSLLRG
FSAPVHLNYP YSDDDLLLLL 551 AHDSDAFTRW EAAQTLYRRA VAANLAALSD
GVELPKHEKL LAAVEKVISD 601 DLLDNAFKAL LLGVPSEAEL WDGAENIDPL
RYHQAREALL DILAVRFLPK 651 WHELNRQAAK QENQSYEYSP EAAGWRTLRN
VCRAFVLRAD PAHIETVAEK 701 YAEMAQNMTH EWGILSAVNG NESDTRNRLL
AQFADKFSDD ALVMDKYFAL 751 VGSSRRSDTL QQVQTALQHP KFSLENPNKA
RSLIGSFSRN VPHFHAEDGS 801 GYRFIADKVI EIDRFNPQVA ARLVQAFNLC
NKLEPHRKNL VKQALQRIRA 851 QEGLSKDVGE IVGKILD* a665-1/m665-1 97.2%
identity in 867 aa overlap 10 20 30 40 50 60 a665-1.pep
MSKTVHYLKDYQTPAYHILKTDLHFDINEPTIVKSRLTVEPKRVGEPLVLDGSAKLLSV
||||||||||||||||||||||||||||||||:|||||||||:||||||||||||||||| m665-1
MSKTVHYLKDYQTPAYHILKTDLHFDINEPQTVVKSRLTVEPQRVGEPLVLDGSAKLLSV 10 20
30 40 50 60 70 80 90 100 110 120 a665-1.pep
KINGVAADYVLEGELLTIADVPSERFTVEVETEILPAENKSLMGLYASAGNLFTQCEPEG
||||:|||||||||||||| ||||||||||||||||||||||||||||:||||||||||| m665-1
KINGAAADYVLEGELLTIAGVPSERFTVEVETEILPAENKSLMGLYASGGNLFTQCEPEG 70 80
90 100 110 120 130 140 150 160 170 180 a665-1.pep
FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEYSDGRHWVKWEDPFAKPS
||||||||||||||||||||||||||||||||||||||||||:|||||||||||||:||| m665-1
FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPS 130
140 150 160 170 180 190 200 210 220 230 240 a665-1.pep
YLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m665-1
YLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLE 190
200 210 220 230 240 250 260 270 280 290 300 a665-1.pep
YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m665-1
YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT 250
260 270 280 290 300 310 320 330 340 350 360 a665-1.pep
GNRVTCRDWFQLSLKEGLTVERDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m665-1
GNRVTCRDWFQLSLKEGLTVERDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPV 310
320 330 340 350 360 370 380 390 400 410 420 a665-1.pep
RPARYEEMNITFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA |||
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m665-1
RPASYEEMNITFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA 370
380 390 400 410 420 430 440 450 460 470 480 a665-1.pep
MVDANGINLDQFALWYSQAGTPVLDAQGRLKNNVFELTIKQTVPPTPDMADKQPMMIPVK
|:||||||||||||||||||||||:|:||||||:||||:||||||||||:|||||||||| m665-1
MADANGINLDQFALWYSQAGTPVLEAEGRLKNNIFELTVKQTVPPTPDMTDKQPMMIPVK 430
440 450 460 470 480 490 500 510 520 530 540 a665-1.pep
IGLLNCNGEAVAFDYQGKRATEAVLLLTEAEQTFQFESVTEAVVPSLLRGFSAPVHLNYP :||||
|||||||||||||||||||||||||||| :|:|||||||||||||||||||||| m665-1
VGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVTEAVVPSLLRGFSAPVHLNYP 490
500 510 520 530 540 550 560 570 580 590 600 a665-1.pep
YSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLAALSDGVELPKHEKLLAAVEKVISD
||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||| m665-1
YSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISD 550
560 570 580 590 600 610 620 630 640 650 660 a665-1.pep
DLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDILAVRFLPKWHELNRQAAK
||||||||||||||||||||||||||||||||||||||||| |||:|||||||||||||| m665-1
DLLDNAFKALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAK 610
620 630 640 650 660 670 680 690 700 710 720 a665-1.pep
QENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYAEMAQNMTHEWGILSAVNG
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| m665-1
QENQSYEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNG 670
680 690 700 710 720 730 740 750 760 770 780 a665-1.pep
NESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKA
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| m665-1
NESDTRNRLLAQFADKFSDDALVMDKYFALVGSSRRSDTLQQVRTALQHPKFSLENPNKA 730
740 750 760 770 780 790 800 810 820 830 840 a665-1.pep
RSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m665-1
RSLIGSFSRNVPHFHAEDGSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNL 790
800 810 820 830 840 850 860 a665-1.pep VKQALQRIRAQEGLSKDVGEIVGKILDX
|||||||||||||||||||||||||||| m665-1 VKQALQRIRAQEGLSKDVGEIVGKILDX
850 860
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2171>:
TABLE-US-02568 g666.seq 1 ATGCTTTGTA TGAATTATCA ATCAAACTCA
GGCGAAGGAG TGCTTGTAGC 51 TAAAACATAT TTATTGACTG CATTGATAAT
GTCTATGGTA ATCTCCGGAT 101 GTCAAGTCAT CCATGCCAAT CAAGGTAAGG
TTAATACTAA TTCTGCTGTC 151 ATCGCAGGTG CAGACGCTCA CACGCCTGAA
CATGTAACGG GACTGACCGA 201 ACAAAAGCAG GTGATTGCAA GTGATTTTAT
AGTAGCGTCA GCCAATCCAT 251 TAGCAACACA AGCTGGCTAT GATATCTTAA
AGCAAGGCGG TAGCGCTGCA 301 GATGCGATGG TGGCGGTGCA GACGACACTA
AGCTTGGTAG AGCCACAGTC 351 GTCAGGCTTG GGCGGTGGTG CATTTGTGTT
GTATTGGGAC AATACCGCCA 401 AAACATTGAC CACATTTGAT GGGCGTGAGA
CGGCACCGAT GCGTGCGACG 451 CCAGAATTAT TTTTGGATAA AGATGGTTAA
CCATTGAAAT TTATGGAAGC 501 GGTGGTCGCT CGGTAGGTAC GCCTGCTATC
CCTAAACTGA
This corresponds to the amino acid sequence <SEQ ID 2172; ORF
666.ng>:
TABLE-US-02569 g666.pep 1 MLCMNYQSNS GEGVLVAKTY LLTALIMSMV
ISGCQVIHAN QGKVNTNSAV 51 IAGADAHTPE HVTGLTEQKQ VIASDFIVAS
ANPLATQAGY DILKQGGSAA 101 DAMVAVQTTL SLVEPQSSGL GGGAFVLYWD
NTAKTLTTFD GRETAPMRAT 151 PELFLDKDGX PLKFMEAVVA RXVRLLSLN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2173>:
TABLE-US-02570 m666.seq 1 ATGCCTTGTA TGAATCATCA ATCAAACTCA
GGCGAAGGAG TGCTTGTGGC 51 TAAAACATAT TTATTGACTG CATTGATAAT
GTCTATGACA ATCTCTGGAT 101 GTCAAGTCAT CCATGCCAAT CAAGGTAAGG
TTAATACTCA TTCTGCTGTC 151 ATCACAGGTG CAGACGCTCA CACGCCTGAA
CATGCAACGG GACTGACCGA 201 ACAAAAGCAG GTGATTGCAA GTGATTTTAT
GGTAGCGTCA GCCAATCCAT 251 TAGCAACACA AGCTGGCTAT GATATCTTAA
AGCAAGGCGG TAGCGCTGCA 301 GATGCGATGG TGGCGGTGCA GACGACACTA
AGCTTGGTAG AGCCACAGTC 351 GTCAGGCTTG GGCGGTGGTG CATTTGTGTT
GTATTGGGAT AATACCGCCA 401 AAACATTGAC CACATTTGAT GGGCGTGAGA
CGGCACCGAT GCGTGCGACG 451 CCGGAATTAT TTTTGGATAA AGATGGTCAA
CCATTGAAAT TTATGGAAGC 501 GGTGGTCGTG GTCGCTCGGT GGGTACGCCT
GCTATCCCTA AACTGA
This corresponds to the amino acid sequence <SEQ ID 2174; ORF
666>:
TABLE-US-02571 m666.pep 1 MPCMNHQSNS GEGVLVAKTY LLTALIMSMT
ISGCQVIHAN QGKVNTHSAV 51 ITGADAHTPE HATGLTEQKQ VIASDFMVAS
ANPLATQAGY DILKQGGSAA 101 DAMVAVQTTL SLVEPQSSGL GGGAFVLYWD
NTAKTLTTFD GRETAPMRAT 151 PELFLDKDGQ PLKFMEAVVV VARWVRLLSL N*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02572 m666/g666 93.9% identity in 181 aa overlap 10 20 30
40 50 60 m666.pep
MPCMNHQSNSGEGVLVAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTPE |
|||:|||||||||||||||||||||||:||||||||||||||||:||||:|||||||| g666
MLCMNYQSNSGEGVLVAKTYLLTALIMSMVISGCQVIHANQGKVNTNSAVIAGADAHTPE 10 20
30 40 50 60 70 80 90 100 110 120 m666.pep
HATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQSSGL
|:||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g666
HVTGLTEQKQVIASDFIVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQSSGL 70 80
90 100 110 120 130 140 150 160 170 180 m666.pep
GGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVVVARWVRLLSL
||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| g666
GGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGXPLKFMEAVV--ARXVRLLSL 130
140 150 160 170 m666.pep NX || g666 NX 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2175>:
TABLE-US-02573 a666.seq 1 ATGCCTTGTA TGAATCATCA ATCAAACTCA
GGCGAAGGAG TGCTTGTGGC 51 TAAAACATAT TTATTGACTG CATTGATAAT
GTCTATGACA ATCTCTGGAT 101 GTCAAGTCAT CCATGCCAAT CAAGGTAAGG
TTAATACTCA TTCTGCTGTC 151 ATCACAGGTG CAGACGCTCA CACGCCTGAA
CATGCAACGG GACTGACCGA 201 ACAAAAGCAG GTGATTGCAA GTGATTTTAT
GGTAGCGTCA GCCAATCCAT 251 TAGCAACACA AGCTGGCTAT GATATCTTAA
AGCAAGGCGG TAGCGCTGCA 301 GATGCGATGG TGGCGGTGCA GACGACACTA
AGCTTGGTAG AGCCACAGTC 351 GTCAGGCTTG GGCGGTGGTG CATTTGTGTT
GTATTGGGAT AATACCGCCA 401 AAACATTGAC CACATTTGAT GGGCGTGAGA
CGGCACCGAT GCGTGCGACG 451 CCGGAATTAT TTTTGGATAA AGATGGTCAA
CCATTGAAAT TTATGGAAGC 501 GGTGGTCGTG GTCGCTCGGT GGGTACGCCT
GCTATCCCTA AACTGA
This corresponds to the amino acid sequence <SEQ ID 2176; ORF
666.a>:
TABLE-US-02574 a666.pep 1 MPCMNHQSNS GEGVLVAKTY LLTALIMSMT
ISGCQVIHAN QGKVNTHSAV 51 ITGADAHTPE HATGLTEQKQ VIASDFMVAS
ANPLATQAGY DILKQGGSAA 101 DAMVAVQTTL SLVEPQSSGL GGGAFVLYWD
NTAKTLTTFD GRETAPMRAT 151 PELFLDKDGQ PLKFMEAVVV VARWVRLLSL N*
m666/a666 100.0% identity in 181 aa overlap 10 20 30 40 50 60
m666.pep
MPCMNHQSNSGEGVLVAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTPE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a666
MPCMNHQSNSGEGVLVAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTPE 10 20
30 40 50 60 70 80 90 100 110 120 m666.pep
HATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQSSGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a666
HATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQSSGL 70 80
90 100 110 120 130 140 150 160 170 180 m666.pep
GGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVVVARWVRLLSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a666
GGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVVVARWVRLLSL 130
140 150 160 170 180 m666.pep NX || a666 NX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2177>:
TABLE-US-02575 g667.seq 1 atgcggtttg tcttctgttt gggcgGAGAG
ATAGtttctg atccgtgtga 51 tttccAtttg gtattcgtcc gcgtcgaatc
tgccgctgAc CAGAcagaaa 101 cgCAGataca tCaaatacgt attcacggca
tcggtttcgc aatAAttgcg 151 GAtttccttc agcgtgcccg cgtgGAacgc
ttcccacact ttgctgccgt 201 ccataCCCAg ctTGCCCGGA AAGCCGCACA
GTTTcgcCat atcgtccagC 251 GGCACATTcg ccctcggctG GTAAAGCGCG
AGCAAATCCA TCAAATCGCA 301 GTGGCGTTGG TGATAACGGC TGATGTAGTT
GTTCCActtg AAATCGCGGC 351 tgtcgccgAA ATCGccgTCG CCCGTATCCC
AATAGCGCGC GGCGTTGATG 401 CCGTATATCA GGGAGCGGTA ATGCAGTACG
GGCAGGTCGA AACCGCCGCC 451 GTTCCAGCTG ACCAGTTGCG GCGTATGTTT
TTCAACCAAT TCGAAAAACT 501 TGGCAATCAC GACTTCTTCG CCATCGTCCA
TCTCGCCGAT GGTGCCGACA 551 TGAACCTTGT CCTGCCCCCA GCGCATACAG
CAGGAAACCG CCACAACCTG 601 ATGGAGGTGG TGCTGCATAA AATCGCCGCC
GGTCTGTGCG CGGCGTTTCT 651 GCTGCGCGAA CAGCACCACT TCGTCATCCG
GCAGGGAAGA CGGCAAGTCA 701 TACAACGTAC GGATACCCTG CACATCGGGT
ACGGTTTCAA TATCGAAAGC 751 CAAAATCGTA TTCATGGCAg tACCTTGCAT
tcaAAAACAG ACtTGCGCCT 801 ATTgTgtcaT TAA
This corresponds to the amino acid sequence <SEQ ID 2178; ORF
667.ng>:
TABLE-US-02576 g667.pep 1 MRFVFCLGGE IVSDPCDFHL VFVRVESAAD
QTETQIHQIR IHGIGFAIIA 51 DFLQRARVER FPHFAAVHTQ LARKAAQFRH
IVQRHIRPRL VKREQIHQIA 101 VALVITADVV VPLEIAAVAE IAVARIPIAR
GVDAVYQGAV MQYGQVETAA 151 VPADQLRRMF FNQFEKLGNH DFFAIVHLAD
GADMNLVLPP AHTAGNRHNL 201 MEVVLHKIAA GLCAAFLLRE QHHFVIRQGR
RQVIQRTDTL HIGYGFNIES 251 QNRIHGSTLH SKTDLRLLCH *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2179>:
TABLE-US-02577 m667.seq (PARTIAL) 1 ATGCGGCTTT TCCCCGGCTT
GTGCGGACAG GTAATTCCGC ATCCGTTTGA 51 TTTCCATTTC GTATTCGTCC
GCATCCAGCC TGCCGCTGAC CAGACAGAAA 101 CGCAGGTACA TCAGATAAGT
GTTTGCCGCG TCGGTTTCGC AATAATTGCG 151 GATTTCCTTC AGCCTGCCCG
TATGGAATGC CTCCCAAACC TTGCTGCCGT 201 CCATACCCAG CTTGCCCGGA
AAACCGCACA GTTTCGCCAT ATCGTCCAGC 251 GGCACGTTTG CCCTCGGCTG
GTAAAGCGCG AGCAAATCCA TCAAATCGCA 301 GTGGCGTTGG TGATAACGGC
TGATGTAGTT GTTCCACTTG AAATCGCGGC 351 TGTCGCCGAA ATCGCCGTCG
CCCATATCCC AATAGCGCGC GGCGTTGATG 401 CCGTATATCA GGGAGCGGTA
ATGCAGTACG GGCAGATCGA AACCGCCGCC 451 GTTCCAACTG ACCAGTTGCG
GCGTATGTTT TTCAATCAAT TCGAAAAATT 501 TAGCAATGAC CACTTCCTCG
CCGTCATCCA TCTCGCCGAT GGTGCCGACA 551 TGTACTTTAT CCTGCCCCCA
ACGCATGCAG CACGAAATCG CCACAACCTG 601 ATGAAGATGA TGCTGCATAA
AATCGCCGCC CGTCTGAGCA CGGCGTTTGT 651 GCTGGGCAAT CAGCACCACT
TG...
This corresponds to the amino acid sequence <SEQ ID 2180; ORF
667>:
TABLE-US-02578 m667.pep (partial) 1 MRLFPGLCGQ VIPHPFDFHF
VFVRIQPAAD QTETQVHQIS VCRVGFAIIA 51 DFLQPARMEC LPNLAAVHTQ
LARKTAQFRH IVQRHVCPRL VKREQIHQIA 101 VALVITADVV VPLEIAAVAE
IAVAHIPIAR GVDAVYQGAV MQYGQIETAA 151 VPTDQLRRMF FNQFEKFSND
HFLAVIHLAD GADMYFILPP THAARNRHNL 201 MKMMLHKIAA RLSTAFVLGN
QHHL...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02579 m667/g667 75.0% identity in 224 aa overlap 10 20 30
40 50 60 m667.pep
MRLFPGLCGQVIPHPFDFHFVFVRIQPAADQTETQVHQISVCRVGFAIIADFLQPARMEC ||: |
|::: | |||:||||:: ||||||||:||| : :|||||||||| ||:| g667
MRFVFCLGGEIVSDPCDFHLVFVRVESAADQTETQIHQIRIHGIGFAIIADFLQRARVER 10 20
30 40 50 60 70 80 90 100 110 120 m667.pep
LPNLAAVHTQLARKTAQFRHIVQRHVCPRLVKREQIHQIAVALVITADVVVPLEIAAVAE :
|::||||||||||:||||||||||: |||||||||||||||||||||||||||||||| g667
FPHFAAVHTQLARKAAQFRHIVQRHIRPRLVKREQIHQIAVALVITADVVVPLEIAAVAE 70 80
90 100 110 120 130 140 150 160 170 180 m667.pep
IAVAHIPIARGVDAVYQGAVMQYGQIETAAVPTDQLRRMFFNQFEKFSNDHFLAVIHLAD
||||:||||||||||||||||||||:||||||:|||||||||||||::| |:|::|||| g667
IAVARIPIARGVDAVYQGAVMQYGQVETAAVPADQLRRMFFNQFEKLGNHDFFAIVHLAD 130
140 150 160 170 180 190 200 210 220 m667.pep
GADMYFILPPTHAARNRHNLMKMMLHKIAARLSTAFVLGNQHHL |||| ::|||:|:|
||||||:::|||||| | :||:| |||: g667
GADMNLVLPPAHTAGNRHNLMEVVLHKIAAGLCAAFLLREQHHFVIRQGRRQVIQRTDTL 190
200 210 220 230 240 g667 HIGYGFNIESQNRIHGSTLHSKTDLRLLCHX 250 260
270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2181>:
TABLE-US-02580 a667.seq 1 ATGCGGTTTG TCTTCTGTTT GGGCGGAGAG
ATAGTTTCTG ATCCGCTTGA 51 TTTCCATTTC GTATTCGTCT GCGTCGAATC
TGCCGCTGAC CAGACAGAAA 101 CGCAGATACA TCAGATAGGT ATTTACCGCA
TCGGTTTCGC AATAATTGCG 151 GATTTCCTTC AGCCTGCCCG CGTGGAACGC
CTCCCACACC TTGCTGCCGT 201 CCATACCCAG CTTGCCCGGA AAACCGCACA
GTTTCGCCAT ATCGTCCAAC 251 GGCACATTCG CCCTCGGCTG GTAAAGCGCG
AGCAAATCCA TCAAATCGCA 301 ATGACGTTGG TGGTAGCGGC TGATGTAGTT
GTTCCACTTG AAATCGCGGC 351 TGTCGCCGAA ATCGCCGTCG CCCATATCCC
AATAGCGCGC GGCGTTGATG 401 CCGTGTAGCA GCGAACGGTA ATGCAGAACC
GGCAGGTCGA AACCGCCGCC 451 GTTCCAACTG ACCAGTTGCG GCGTATGTTT
TTCAATCAAC TCGAAAAATT 501 TGGCGATAAC CACTTCCTCG CCGTCATCCA
TCTCGCCGAT TGTACCGACA 551 TGGACTTTAT CCTGCCCCCA ACGCATGCAG
CACGAAATCG CCACAATCTG 601 ATGAAGATGA TGCTGCATAA AATCCCCACC
CGTCTGAGCA CGGCGTTTTT 651 GCTGGGCAAA CAGCACCACT TCATCGTCGG
GCAGCGAGGA CGGCAAGTCA 701 TACAGCGTAC GGATACACTG CACATCGGGT
ACGGTTTCAA TATCGAAAGC 751 CAAAATCGTG GTCATGACAG CACCTTGTAT
TTAAAA.CAG ACTTGCGCCT 801 ATTGTGTCAT TAA
This corresponds to the amino acid sequence <SEQ ID 2182; ORF
667.a>:
TABLE-US-02581 a667.pep 1 MRFVFCLGGE IVSDPLDFHF VFVCVESAAD
QTETQIHQIG IYRIGFAIIA 51 DFLQPARVER LPHLAAVHTQ LARKTAQFRH
IVQRHIRPRL VKREQIHQIA 101 MTLVVAADVV VPLEIAAVAE IAVAHIPIAR
GVDAV*QRTV MQNRQVETAA 151 VPTDQLRRMF FNQLEKFGDN HFLAVIHLAD
CTDMDFILPP THAARNRHNL 201 MKMMLHKIPT RLSTAFLLGK QHHFIVGQRG
RQVIQRTDTL HIGYGFNIES 251 QNRGHDSTLY LKXDLRLLCH * m667/a667 79.0%
identity in 224 aa overlap 10 20 30 40 50 60 m667.pep
MRLFPGLCGQVIPHPFDFHFVFVRIQPAADQTETQVHQISVCRVGFAIIADFLQPARMEC ||: |
|::: |:||||||| :: ||||||||:|||:: |:|||||||||||||:| a667
MRFVFCLGGEIVSDPLDFHFVFVCVESAADQTETQIHQIGIYRIGFAIIADFLQPARVER 10 20
30 40 50 60 70 80 90 100 110 120 m667.pep
LPNLAAVHTQLARKTAQFRHIVQRHVCPRLVKREQIHQIAVALVITADVVVPLEIAAVAE
||:||||||||||||||||||||||: |||||||||||||::||::|||||||||||||| a667
LPHLAAVHTQLARKTAQFRHIVQRHIRPRLVKREQIHQIAMTLVVAADVVVPLEIAAVAE 70 80
90 100 110 120 130 140 150 160 170 180 m667.pep
IAVAHIPIARGVDAVYQGAVMQYGQIETAAVPTDQLRRMFFNQFEKFSNDHFLAVIHLAD
||||||||||||||| | :||| |:|||||||||||||||||:|||:::|||||||||| a667
IAVAHIPIARGVDAVXQRTVMQNRQVETAAVPTDQLRRMFFNQLEKFGDNHFLAVIHLAD 130
140 150 160 170 180 190 200 210 220 m667.pep
GADMYFILPPTHAARNRHNLMKMMLHKIAARLSTAFVLGNQHHL :||
||||||||||||||||||||||| :||||||:||:|||: a667
CTDMDFILPPTHAARNRHNLMKMMLHKIPTRLSTAFLLGKQHHFIVGQRGRQVIQRTDTL 190
200 210 220 230 240 a667 HIGYGFNIESQNRGHDSTLYLKXDLRLLCHX 250 260
270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2183>:
TABLE-US-02582 g669.seq 1 ATGCGCCGCA TCGTTAAAAA ACACCAGCCC
GTAAACGCGC CACATATCGT 51 TTTGGAAATT CGGATAATGA AACTGCATCG
CGCGTTTGTC TTCCTTGGGC 101 GGAAACGTCC CCATCATCAT GACCGCAGCC
TTCGGCGGCA ACACGGGATC 151 GAAGGGATGG GTTTCGATTT CAAGCAGATT
TTCAGACACG TTCAATCCTC 201 CAACAGGCAA AGCGGCAGAC AGCCGGTTTG
CACCAAACCG CCAAACACGG 251 CAAGCCTTCA AACAGCATTA TCACGCCCTG
CCGTTTTCGG TTACAATGCC 301 GACATCAAAC GGATACTGTA A
This corresponds to the amino acid sequence <SEQ ID 2184; ORF
669.ng>:
TABLE-US-02583 g669.pep 1 MRRIVKKHQP VNAPHIVLEI RIMKLHRAFV
FLGRKRPHHH DRSLRRQHGI 51 EGMGFDFKQI FRHVQSSNRQ SGRQPVCTKP
PNTASLQTAL SRPAVFGYNA 101 DIKRIL
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2185>:
TABLE-US-02584 m669.seq 1 ATGCGCCGCA TCATTAAAAA ACACCAGCCC
ATAAACGCGC CACATATCGT 51 TTTGGAAATT CGGATAATGA AACTGCATCG
CGCGTTTGTC TTCCTTGGGC 101 GGAAACGTCC CCATCATCAT GACAGCAGCC
TTCGGCGGCA ACACGGGATC 151 GAAGGGATGG GTTTCGATTT CAAGCAGATT
TTCAGACACG TTCAATCCTC 201 CAACAGGCAA AACGGCAGAC AGCCGGTTTG
CACCAAACCG CCAAACACGG 251 CAAGCCTTCA AACAGCATTA TCACGCCCTG
CCGTTTTCGG TTACAATGCC 301 GACATCAAAC GGATACTGTA A
This corresponds to the amino acid sequence <SEQ ID 2186; ORF
669>:
TABLE-US-02585 m669.pep 1 MRRIIKKHQP INAPHIVLEI RIMKLHRAFV
FLGRKRPHHH DSSLRRQHGI 51 EGMGFDFKQI FRHVQSSNRQ NGRQPVCTKP
PNTASLQTAL SRPAVFGYNA 101 DIKRIL*
Computer analysis of this amino acid sequence gave the following
results:
TABLE-US-02586 m669/g669 96.2% identity in 106 aa overlap 10 20 30
40 50 60 m669.pep
MRRIIKKHQPINAPHIVLEIRIMKLHRAFVFLGRKRPHHHDSSLRRQHGIEGMGFDFKQI
||||:|||||:|||||||||||||||||||||||||||||| |||||||||||||||||| g669
MRRIVKKHQPVNAPHIVLEIRIMKLHRAFVFLGRKRPHHHDRSLRRQHGIEGMGFDFKQI 10 20
30 40 50 60 70 80 90 100 m669.pep
FRHVQSSNRQNGRQPVCTKPPNTASLQTALSRPAVFGYNADIKRILX
||||||||||:|||||||||||||||||||||||||||||||||||| g669
FRHVQSSNRQSGRQPVCTKPPNTASLQTALSRPAVFGYNADIKRILX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2187>:
TABLE-US-02587 a669.seq 1 ATGCGCCGCA TCATTAAAAA ACACCAGCCC
GTAAACGCGC CACATATCGT 51 TTTGGAAATT CGGATAATGA AACTGCATCG
CGCGTTTGTC TTCCTTGGGC 101 GGAAACGTCC CCATCATCAT GACCGCAGCC
TTCGGCGGCA ACACGGAATC 151 GAAGGGATGG GTTTCGATTT CAAGCAGATT
TTCAGACACG TTCAATCCTC 201 CAACAGGCAA AACGGCAGAC AGCCGGTTTG
CACCAAACCG CCAAACACGG 251 CAAGCCTTCA AACAGCATTA TCACGCCCTG
CCGTTTTCGG TTACAATGCC 301 GACATCAAAC GGATACTGTA A
This corresponds to the amino acid sequence <SEQ ID 2188; ORF
669.a>:
TABLE-US-02588 a669.pep 1 MRRIIKKHQP VNAPHIVLEI RIMKLHRAFV
FLGRKRPHHH DRSLRRQHGI 51 EGMGFDFKQI FRHVQSSNRQ NGRQPVCTKP
PNTASLQTAL SRPAVFGYNA 101 DIKRIL* m669/a669 98.1% identity in 106
aa overlap 10 20 30 40 50 60 m669.pep
MRRIIKKHQPINAPHIVLEIRIMKLHRAFVFLGRKRPHHHDSSLRRQHGIEGMGFDFKQI
||||:|||||:|||||||||||||||||||||||||||||| |||||||||||||||||| a669
MRRIIKKHQPVNAPHIVLEIRIMKLHRAFVFLGRKRPHHHDRSLRRQHGIEGMGFDFKQI 10 20
30 40 50 60 70 80 90 100 m669.pep
FRHVQSSNRQNGRQPVCTKPPNTASLQTALSRPAVFGYNADIKRILX
||||||||||||||||||||||||||||||||||||||||||||||| a669
FRHVQSSNRQNGRQPVCTKPPNTASLQTALSRPAVFGYNADIKRILX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2189>:
TABLE-US-02589 g670.seq 1 ATGACTTGTT GCAGGAACTG CTTGGCGCGT
TCGTGTTTCG GGTTGGTGAA 51 AAACGCTTCC GGCGTTTCGT CTTCAAGGAT
TTGCCCTTTA TCGACGAAAA 101 TCACGCGGTC GGCAACTTCG CGGGCAAACC
CCATTTCGTG GGTTACGCAC 151 ATCATCGTCA TGCCGCTTTC CGCCAAGTCT
TTCATCACTT TCAACACTTC 201 GCCGACCATT TCGGGGTCGA GTGCGGAAGT
CGGCTCGTCA AACAGCATCA 251 CGCGCGGCTC CATCGCCAGC CCGCGCGCAA
TCGCCACGCG TTGCTGCTGG 301 CCGCCGGAAA GTTGGGAAGG GAAGGCGTCT
TTTTTGTGTG CCAGTCCGAC 351 GCGTTCCAAA AGCTCCATTG CCTTTTTCTC
CGCCTGTTCC GCATTTTGCC 401 CCTTAACCTT CATCGGTGCG AGGGTGATGT
TGTCCAACAC GGTCAGGTGC 451 GGGTAG
This corresponds to the amino acid sequence <SEQ ID 2190; ORF
670.ng>:
TABLE-US-02590 g670.pep 1 MTCCRNCLAR SCFGLVKNAS GVSSSRICPL
STKITRSATS RANPISWVTH 51 IIVMPLSAKS FITFNTSPTI SGSSAEVGSS
NSITRGSIAS PRAIATRCCW 101 PPESWEGKAS FLCASPTRSK SSIAFFSACS
AFCPLTFIGA RVMLSNTVRC 151 G*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2191>:
TABLE-US-02591 m670.seq 1 ATGACCTGTT GCAGGAACTG CTTGGCGCGT
TCGTGTTTCG GGTTGGTAAA 51 AAACGCTTCG GGCGTTTCGT CTTCGAGGAT
TTGCCCTTTA TCGACGAAAA 101 TCACGCGGTC GGCAACTTCG CGGGCAAACC
CCATTTCGTG GGTTACGCAC 151 ATCATCGTCA TGCCGCTTTC TGCCAAGTCT
TTCATCACTT TCAACACTTC 201 GCCGACCATT TCGGGGTCGA GTGCGGAGGT
CGGTTCGTCA AACAACATTA 251 CGCGCGGTTC CATCGCCAAA CCGCGTGCAA
TCGCCACGCG TTGCTGCTGG 301 CCGCCGGAAA GTTGGGAAGG GAAGGCGTCT
TTTTTGTGTG CCAGTCCGAC 351 GCGTTCCAAA AGCTCCATTG CCTTTTTCTC
CGCCTGTTCC GCATTTTGCC 401 CCTTAACCTT CATCGGTGCG AGGGTAATGT
TTTCCAACAC GGTCAGGTGC 451 GGGTAG
This corresponds to the amino acid sequence <SEQ ID 2192; ORF
670>:
TABLE-US-02592 m670.pep 1 MTCCRNCLAR SCFGLVKNAS GVSSSRICPL
STKITRSATS RANPISWVTH 51 IIVMPLSAKS FITFNTSPTI SGSSAEVGSS
NNITRGSIAK PRAIATRCCW 101 PPESWEGKAS FLCASPTRSK SSIAFFSACS
AFCPLTFIGA RVMFSNTVRC 151 G*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02593 m670/g670 98.0% identity in 151 aa overlap 10 20 30
40 50 60 m670.pep
MTCCRNCLARSCFGLVKNASGVSSSRICPLSTKITRSATSRANPISWVTHIIVMPLSAKS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g670
MICCRNCLARSCFGLVKNASGVSSSRICPLSTKITRSATSRANPISWVIHIIVMPLSAKS 10 20
30 40 50 60 70 80 90 100 110 120 m670.pep
FITFNTSPTISGSSAEVGSSNNITRGSIAKPRAIATRCCWPPESWEGKASFLCASPTRSK
|||||||||||||||||||||:|||||||:|||||||||||||||||||||||||||||| g670
FITFNTSPTISGSSAEVGSSNSITRGSIASPRAIATRCCWPPESWEGKASFLCASPTRSK 70 80
90 100 110 120 130 140 150 m670.pep
SSIAFFSACSAFCPLTFIGARVMFSNTVRCGX |||||||||||||||||||||||:||||||||
g670 SSIAFFSACSAFCPLIFIGARVMLSNIVRCGX 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2193>:
TABLE-US-02594 a670.seq 1 ATGACCTGTT GCAGGAACTG CTTGGCGCGT
TCGTGTTTCG GGTTGGTAAA 51 AAACGCTTCC GGCGTTTCGT CTTCGAGGAT
TTGCCCTTTA TCGACGAAAA 101 TCACGCGGTC GGCAACTTCG CGGGCAAACC
CCATTTCGTG GGTTACGCAC 151 ATCATGGTCA TACCGCTTTC CGCCAAGTCT
TTCATCACTT TCAACACTTC 201 GCCGACCATT TCGGGGTCGA GTGCGGAGGT
CGGTTCGTCA AACAACATTA 251 CGCGCGGTTC CATCGCCAAA CCGCGTGCAA
TCGCCACGCG TTGCTGCTGG 301 CCGCCGGAAA GTTGGGAAGG GAAGGCGTCT
TTTTTGTGTG CCAGTCCGAC 351 GCGTTCCAAA AGTTCCATCG CTTTTTTCTC
TGCCTGTTCC GCATTTTGAC 401 CTTTAACCTT CATCGGTGCG AGGGTAATGT
TTTCCAACAC GGTCAGGTGC 451 GGGTAG
This corresponds to the amino acid sequence <SEQ ID 2194; ORF
670.a>:
TABLE-US-02595 a670.pep 1 MTCCRNCLAR SCFGLVKNAS GVSSSRICPL
STKITRSATS RANPISWVTH 51 IMVIPLSAKS FITFNTSPTI SGSSAEVGSS
NNITRGSIAK PRAIATRCCW 101 PPESWEGKAS FLCASPTRSK SSIAFFSACS
AF*PLTFIGA RVMFSNTVRC 151 G* m670/a670 98.0% identity in 151 aa
overlap 10 20 30 40 50 60 m670.pep
MTCCRNCLARSCFGLVKNASGVSSSRICPLSTKITRSATSRANPISWVTHIIVMPLSAKS
|||||||||||||||||||||||||||||||||||||||||||||||||||:|:|||||| a670
MTCCRNCLARSCFGLVKNASGVSSSRICPLSTKITRSATSRANPISWVTHIMVIPLSAKS 10 20
30 40 50 60 70 80 90 100 110 120 m670.pep
FITFNTSPTISGSSAEVGSSNNITRGSIAKPRAIATRCCWPPESWEGKASFLCASPTRSK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a670
FITFNTSPTISGSSAEVGSSNNITRGSIAKPRAIATRCCWPPESWEGKASFLCASPTRSK 70 80
90 100 110 120 130 140 150 m670.pep
SSIAFFSACSAFCPLTFIGARVMFSNTVRCGX |||||||||||| |||||||||||||||||||
a670 SSIAFFSACSAFXPLTFIGARVMFSNTVRCGX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2195>:
TABLE-US-02596 g671.seq 1 ATGATCAGCA GGGTAACAAT CAAAACGCCT
TTCAATGCAC CGAATACACC 51 GCCCAAAATG CGGTTGGCAA AGCCCAGACC
GACCGCCGAA ACTGCGCCGG 101 TCAGCAGCGA ACGGAGCATT TTCTGGATCA
GACAGGCAAT GACGAACAGG 151 GAAATGAATG ACAGagccaa TGCAAACAgg
cggggTTGGA ACGaggCAAA 201 GGCGAGGTcg gcgaaggGTG CGGCaaAGAG
TTTggcaaAA AAGAaggAAA 251 ccaccCATGC cACCATCgaa ccTGCTTCCG
CAATCACGCC GCGCATCGTG 301 GAAATGACGA TGCAGGCGGC GATGACGGcg
gAGGCGAGGA GGTCGGCAAT 351 GGGGAGGCTA TTCATTCGTT ACCTGGCCGG
CGATGCCGTG CACGCGCAGT 401 TTGTTCAAAT CGCGTTCGGC ATCCCTTGCG
TTTTTATAGT TGCTTGA
This corresponds to the amino acid sequence <SEQ ID 2196; ORF
671.ng>:
TABLE-US-02597 g671.pep 1 MISRVTIKTP FNAPNTPPKM RLAKPRPTAE
TAPVSSERSI FWIRQAMTNR 51 EMNDRANANR RGWNEAKARS AKGAAKSLAK
KKETTHATIE PASAITPRIV 101 EMTMQAAMTA EARRSAMGRL FIRYLAGDAV
HAQFVQIAFG IPCVFIVA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2197>:
TABLE-US-02598 m671.seq 1 ATGACCAGCA GGGTAACAAT CAAAACGCCT
TTCAATGCAC CGAATACGCC 51 GCCCAAAATG CGGTTGGCAA AGCCCAAACC
GACCGCCGAA ACTGCGCTGG 101 TCAGCAGCGA ACGGAGCATT TTCTGGATCA
GACAGGCAAT GACGAACAGG 151 GAAATGAACG ACAGAGCCAA TGCAAACAGG
CGGGGTTGGA ACGAGGCAAA 201 GGCGAGGTCG GCGAAGGAGG CGGCAAAGAG
TTTGGCGAAA AAGAAGGAAA 251 CCACCCATGC CGCCATTGAG CCTGCCTCCG
CAATCACGCC GCGCATCGCG 301 GATAGCACGA TGCAGGCGGC GATGACGGCG
GAGACGAGGA GGTCGGCAAT 351 GGGGAGGCTA TTCATTCGTT ACCTGACCGG
CGATACCGTG TACGCGCAAT 401 TTGTTCAAAT CGCGTTCGGC ATCCCTTGCG
TTTTTATAGT TGCTTGA
This corresponds to the amino acid sequence <SEQ ID 2198; ORF
671>:
TABLE-US-02599 m671.pep 1 MTSRVTIKTP FNAPNTPPKM RLAKPKPTAE
TALVSSERSI FWIRQAMTNR 51 EMNDRANANR RGWNEAKARS AKEAAKSLAK
KKETTHAAIE PASAITPRIA 101 DSTMQAAMTA ETRRSAMGRL FIRYLTGDTV
YAQFVQIAFG IPCVFIVA*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02600 m671/g671 91.9% identity in 148 aa overlap 10 20 30
40 50 60 m671.pep
MTSRVTIKTPFNAPNTPPKMRLAKPKPTAETALVSSERSIFWIRQAMTNREMNDRANANR |
|||||||||||||||||||||||:|||||| ||||||||||||||||||||||||||| g671
MISRVTIKTPFNAPNTPPKMRLAKPRPTAETAPVSSERSIFWIRQAMTNREMNDRANANR 10 20
30 40 50 60 70 80 90 100 110 120 m671.pep
RGWNEAKARSAKEAAKSLAKKKETTHAAIEPASAITPRIADSTMQAAMTAETRRSAMGRL
|||||||||||| ||||||||||||||:|||||||||||:: |||||||||:|||||||| g671
RGWNEAKARSAKGAAKSLAKKKETTHATIEPASAITPRIVEMTMQAAMTAEARRSAMGRL 70 80
90 100 110 120 130 140 149 m671.pep FIRYLTGDTVYAQFVQIAFGIPCVFIVAX
|||||:||:|:|||||||||||||||||| g671 FIRYLAGDAVHAQFVQIAFGIPCVFIVAX
130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2199>:
TABLE-US-02601 a671.seq 1 ATGACCAGCA GGGTAATAAT CAAAATGCCT
TTCAATGCAC CGAATACGCC 51 GCCCAAAATG CGGTTGGCAA AGCCCAAACC
GACCGCCGAA ACTGCCCCGG 101 TCAGCAGCGA GCGGAGTATT TTCTGGATCA
GACAGGCAAT GACGAATAGG 151 GAAATGAACG ACAGAGCCAA TGCAAACAGG
CGGGGTTGGA ACGATGCAAA 201 GGCGATGTCG GCGAAGGGTG CGGCAAAGAG
TTTGGCGAAA AAAAAGGCAA 251 CCACCCATGC CGCCATTGAG CCAGCCTCCG
CAATCACGCC GCGCATCGCG 301 GATAGCACGA TGCAGGCGGC GATGATGGCG
GAGACGAGGA GGTCGGCAAC 351 GGGGAGGTTA TTCATTCGTT ACCTGACCGG
CGATACCGTG TACGCGCAAT 401 TTGTTCAAAT CGCGTTCGGC ATCCCTTGCG
TTTTTATAGT TGCTTGA
This corresponds to the amino acid sequence <SEQ ID 2200; ORF
671.a>:
TABLE-US-02602 a671.pep 1 MTSRVIIKMP FNAPNTPPKM RLAKPKPTAE
TAPVSSERSI FWIRQAMTNR 51 EMNDRANANR RGWNDAKAMS AKGAAKSLAK
KKATTHAAIE PASAITPRIA 101 DSTMQAAMMA ETRRSATGRL FIRYLTGDTV
YAQFVQIAFG IPCVFIVA* m671/a671 93.9% identity in 148 aa overlap 10
20 30 40 50 60 m671.pep
MTSRVTIKTPFNAPNTPPKMRLAKPKPTAETALVSSERSIFWIRQAMTNREMNDRANANR |||||
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||| a671
MTSRVIIKMPFNAPNTPPKMRLAKPKPTAETAPVSSERSIFWIRQAMTNREMNDRANANR 10 20
30 40 50 60 70 80 90 100 110 120 m671.pep
RGWNEAKARSAKEAAKSLAKKKETTHAAIEPASAITPRIADSTMQAAMTAETRRSAMGRL
||||:||| ||| ||||||||| ||||||||||||||||||||||||| ||||||| ||| a671
RGWNDAKAMSAKGAAKSLAKKKATTHAAIEPASAITPRIADSTMQAAMMAETRRSATGRL 70 80
90 100 110 120 130 140 149 m671.pep FIRYLTGDTVYAQFVQIAFGIPCVFIVAX
||||||||||||||||||||||||||||| a671 FIRYLTGDTVYAQFVQIAFGIPCVFIVAX
130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2201>:
TABLE-US-02603 g672.seq 1 ATGAGGAAAA TCCGCACCAA AATCTGCGGC
ATCACCACAC CGGAAGACGC 51 ACTGTATGCC GCCCACGCCG GCGCAGACGC
ATTGGGACTG GTTTTTTACC 101 CCCAAAGCCC CCGCGCTATC GACATCATTA
AAGCACAAAA AATCGCCGCC 151 GCACTGCCGC CGTTTGTCAG CGTTGTCGCC
CTTTTCGTCA ACGAAAGCGC 201 GCAAAACATC CGCCGCATCC TTGCCGAAGT
GCCGATACAC ATCATCCAAT 251 TCCACGGCGA CGAAGACGAT GCATTCTGCC
GGCAGTTCGA CCGCCCCTAT 301 ATTAAAGCCA TTCGTGTTCA GACGGCATCA
GACATCCGAA ACGCCGCCAC 351 GCGCTTCCCC AACGCTCAGG CACTGCTGTT
CGATGCCTAT CACCCTTCGG 401 AATACGGCGG CACCGGACAC CGCTTCGact
GGacgctgtt ggcggAATAT 451 TCGGGCAAGC CGTGGGTGCT TGCCGGCGGG
CTGACCCCTG AAAACGTCGG 501 CGAAGCCGTC CGCATCACCG GAGCGGAAGC
GGTCGACGTA TCCGGCGGCG 551 TGGAAGCGTC TAAAGGCAAA AAAGACCCCG
CCAAAGTCGC CGCCTTTATC 601 GCAACCGCCA ACCGCCTATC CCGTTAA
This corresponds to the amino acid sequence <SEQ ID 2202; ORF
672.ng>:
TABLE-US-02604 g672.pep 1 MRKIRTKICG ITTPEDALYA AHAGADALGL
VFYPQSPRAI DIIKAQKIAA 51 ALPPFVSVVA LFVNESAQNI RRILAEVPIH
IIQFHGDEDD AFCRQFDRPY 101 IKAIRVQTAS DIRNAATRFP NAQALLFDAY
HPSEYGGTGH RFDWTLLAEY 151 SGKPWVLAGG LTPENVGEAV RITGAEAVDV
SGGVEASKGK KDPAKVAAFI 201 ATANRLSR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2203>:
TABLE-US-02605 m672.seq 1 ATGAGGAAAA TCCGCACCAA AATCTGCGGC
ATCACCACAC CGGAAGACGC 51 AGCTGCCGCC GCAGCGGCAG GTGCGGATGC
CGTCGGGCTG GTCTTTTTCC 101 AAGGCAGCAG CCGGGCCGTC GATATTGCCC
GCGCCAAAAA AATCACCGCC 151 GCACTGCCGC CGTTTGTCAG CGTTGTCGCC
CTTTTCGTCA ACGAAAGCGC 201 GCAAAACATC CGCCGCATCC TTGCCGAAGT
GCCGATACAC ATCATCCAAT 251 TCCACGGCGA CGAAGACGAC GCATTCTGCC
GCCAGTTCCA CCGCCCCTAT 301 ATCAAAGCCA TTCGTGTTCA GACGGCATCA
GACATCCGAA ACGCCGCCAC 351 GCGCTTCCCC GACGCTCAGG CACTGCTGTT
CGATGCCTAC CATCCTTCGG 401 AATACGGCGG CACCGGAAAC CGCTTCGACT
GGACGCTGCT GGCGGAATAT 451 TCGGGCAAAC CGTGGGTGCT TGCCGGCGGG
CTGACCCCTG AAAACGTCGG 501 CGAAGCCGTC CGCATCACCG GAGCGGAATC
GGTCGATGTA TCCGGCGGTG 551 TGGAAGCGTC TAAAGGCAAA AAAGATGCCG
CCAAAGTCGC CGCCTTTATC 601 GCAACCGCCA ACCGCCTATC CCGTTAA
This corresponds to the amino acid sequence <SEQ ID 2204; ORF
672>:
TABLE-US-02606 m672.pep 1 MRKIRTKICG ITTPEDAAAA AAAGADAVGL
VFFQGSSRAV DIARAKKITA 51 ALPPFVSVVA LFVNESAQNI RRILAEVPIH
IIQFHGDEDD AFCRQFHRPY 101 IKAIRVQTAS DIRNAATRFP DAQALLFDAY
HPSEYGGTGN RFDWTLLAEY 151 SGKPWVLAGG LTPENVGEAV RITGAESVDV
SGGVEASKGK KDAAKVAAFI 201 ATANRLSR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02607 m672/g672 91.3% identity in 208 aa overlap 10 20 30
40 50 60 m672.pep
MRKIRTKICGITTPEDAAAAAAAGADAVGLVFFQGSSRAVDIARAKKITAALPPFVSVVA
||||||||||||||||| || ||||:||||: | ||:|| :|:||:||||||||||| g672
MRKIRTKICGITTPEDALYAAHAGADALGLVFYPQSPRAIDIIKAQKIAAALPPFVSVVA 10 20
30 40 50 60 70 80 90 100 110 120 m672.pep
LFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFHRPYIKAIRVQTASDIRNAATRFP
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| g672
LFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIKAIRVQTASDIRNAATRFP 70 80
90 100 110 120 130 140 150 160 170 180 m672.pep
DAQALLFDAYHPSEYGGTGNRFDWTLLAEYSGKPWVLAGGLTPENVGEAVRITGAESVDV
:||||||||||||||||||:||||||||||||||||||||||||||||||||||||:||| g672
NAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGGLTPENVGEAVRITGAEAVDV 130
140 150 160 170 180 190 200 209 m672.pep
SGGVEASKGKKDAAKVAAFIATANRLSRX |||||||||||| |||||||||||||||| g672
SGGVEASKGKKDPAKVAAFIATANRLSRX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2205>:
TABLE-US-02608 a672.seq 1 ATGAGGAAAA TCCGCACCAA AATCTGCGGC
ATCACCACAC CGGAAGACGC 51 ACTGTATGCC GCCCACGCCG GCGCAGACGC
ATTGGGACTG GTTTTTTACC 101 CCCAAAGCCC CCGCGCTGTC GACATCATTA
AAGCACAAAA AATCACCGCC 151 GCACTGCCGC CGTTTGTCAG CGTTGTCGCC
CTTTTCGTCA ACGAAAGCGC 201 GCAAAACATC CGCCGCATCC TTGCCGAAGT
ACCGATACAC ATCATCCAAT 251 TCCACGGCGA CGAAGACGAC GCATTCTGCC
GCCAGTTCCA CCGCCCCTAT 301 ATCAAGGCCA TTCGTGTTCA GACGGCATCA
GACATCCGAA ACGCCGCCGA 351 CCGCTTCCCC GACGCTCAGG CACTGCTGTT
CGATGCCTAC CATCCTTCGG 401 AATACGGCGG CACCGGACAC CGCTTCGACT
GGACGCTGTT GGCGGAATAT 451 TCGGGCAAAC CGTGGGTGCT TGCCGGCGGG
CTGACCCCTG AAAACGTCGA 501 CGAAGCCATC CGCATCACCG GAGCGGAAGC
GGTCGATGTA TCCGGCGGCG 551 TGGAAGCGTC TAAAGGCAAA AAAGACCCAG
CCAAAGTTGC CGCCTTTATC 601 GCAACCGCCA ACCGCCTATC CCGTTAA
This corresponds to the amino acid sequence <SEQ ID 2206; ORF
672.a>:
TABLE-US-02609 a672.pep 1 MRKIRTKICG ITTPEDALYA AHAGADALGL
VFYPQSPRAV DIIKAQKITA 51 ALPPFVSVVA LFVNESAQNI RRILAEVPIH
IIQFHGDEDD AFCRQFHRPY 101 IKAIRVQTAS DIRNAADRFP DAQALLFDAY
HPSEYGGTGH RFDWTLLAEY 151 SGKPWVLAGG LTPENVDEAI RITGAEAVDV
SGGVEASKGK KDPAKVAAFI 201 ATANRLSR* m672/a672 91.8% identity in 208
aa overlap 10 20 30 40 50 60 m672.pep
MRKIRTKICGITTPEDAAAAAAAGADAVGLVFFQGSSRAVDIARAKKITAALPPFVSVVA
||||||||||||||||| || |||||:||||: | ||||| :|:|||||||||||||| a672
MRKIRTKICGITTPEDALYAAHAGADALGLVFYPQSPRAVDIIKAQKITAALPPFVSVVA 10 20
30 40 50 60 70 80 90 100 110 120 m672.pep
LFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFHRPYIKAIRVQTASDIRNAATRFP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| a672
LFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFHRPYIKAIRVQTASDIRNAADRFP 70 80
90 100 110 120 130 140 150 160 170 180 m672.pep
DAQALLFDAYHPSEYGGTGNRFDWTLLAEYSGKPWVLAGGLTPENVGEAVRITGAESVDV
|||||||||||||||||||:|||||||||||||||||||||||||| ||:||||||:||| a672
DAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGGLTPENVDEAIRITGAEAVDV 130
140 150 160 170 180 190 200 209 m672.pep
SGGVEASKGKKDAAKVAAFIATANRLSRX |||||||||||| |||||||||||||||| a672
SGGVEASKGKKDPAKVAAFIATANRLSRX 190 200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2207>:
TABLE-US-02610 g673.seq 1 ATGGATATTG AAACCTTCCT TGCAGGGGAA
CGCGCCGCCG GCGGATACCG 51 TTGCGGCTTC GTGGCGATTG TCGGTCGTCC
GAACGTGGGC AAATCAACGC 101 TGATGAACCA TCTCATCGGT CAGAAAATCA
GTATTACCAG CAAAAAGGCG 151 CAGACGACGC GCAACCGCGT AACGGGGATT
TATACCGACG ATACCGCGCA 201 GTTCGTGTTT GTCGATACGC CGGGCTTTCA
AACCGACCAC CGCAACGCGC 251 TCAACGACAG GCTGAATCAA AATGTTACCG
AGGCGCTCGG CGGTGTGGAT 301 GTGGTGGTTT TCGTCGTGGA GGCGATGCGC
CTTACCGATG CCGACCGCGT 351 CGTGTTGAAA CAACTGCCCA AGCACACGCC
GGTCATTTTA GTGATCAACA 401 AAATCGACAA GGACAAGGCG AAAGACCGTT
ACGCGCTGGA GGCGTTTGTT 451 GCCCAAGTGC GCGCCGAATT TGAATTTGCG
GCGGCGGAGG CGGTCAGTGC 501 GAAACACGGT TTGCGGATTG CCAACCTGTT
GGAGCTGCTC AAGCCGTATC 551 TGCCCGAAAG CGTACCGATG TATCCCGAAG
ACATGGTTAC GGACAAATCG 601 GCGCGTTTTT TGGCGATGGA AATCGTGCGT
GAAAAACTCT TCCGCTATTT 651 GGGCGAGGAG CTGCCTTATG CGATGAACGT
CGAAGTGGAG CAGTTTGAAG 701 AGGGAGACGG TTTGAACCGC ATCTACatcg
cCGTTTTGGT CGACAAAGAA 751 AGCCAAAAGG CGATTTTGAT CGGTAAAGGC
GGGGAGCGTT TGAAAAAAAT 801 TTCCACCGAA GCGCGGCTGG ATATGGAAAA
ACTGTTTGAT AACAAAGTAT 851 TTTTGAAGGT CTGGGTCAAA GTCAAATCCG
GTTGGGCAGA CGACATTCGC 901 TTCCTGCGCG AGCTGGGTTT GTAG
This corresponds to the amino acid sequence <SEQ ID 2208; ORF
673.ng>:
TABLE-US-02611 g673.pep 1 MDIETFLAGE RAAGGYRCGF VAIVGRPNVG
KSTLMNHLIG QKISITSKKA 51 QTTRNRVTGI YTDDTAQFVF VDTPGFQTDH
RNALNDRLNQ NVTEALGGVD 101 VVVFVVEAMR LTDADRVVLK QLPKHTPVIL
VINKIDKDKA KDRYALEAFV 151 AQVRAEFEFA AAEAVSAKHG LRIANLLELL
KPYLPESVPM YPEDMVTDKS 201 ARFLAMEIVR EKLFRYLGEE LPYAMNVEVE
QFEEGDGLNR IYIAVLVDKE 251 SQKAILIGKG GERLKKISTE ARLDMEKLFD
NKVFLKVWVK VKSGWADDIR 301 FLRELGL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2209>:
TABLE-US-02612 m673.seq 1 ATGGATATTG AAACCTTCCT TGCAGGGGAA
CGCGCCGCCG GCGGATACCG 51 TTGCGGCTTC GTAGCGATTG TCGGCCGTCC
GAACGTGGGC AAATCAACGC 101 TGATGAACCA TCTCATCGGT CAGAAAATCA
GTATTACCAG CAAAAAGGCG 151 CAGACGACGC GCAACCGCGT AACGGGGATT
TATACCGACG ATACCGCGCA 201 GTTCGTGTTT GTCGATACGC CCGGCTTTCA
AACCGACCAC CGCAACGCGC 251 TCAACGACAG GCTGAATCAA AATGTTACCG
AGGCGCTCGG CGGCGTGGAT 301 GTGGTGGTTT TCGTCGTGGA GGCGATGCGC
TTTACCGATG CCGACCGCGT 351 CGTGTTGAAA CAACTGCCCA AGCACACGCC
GGTCATTTTA GTGGTCAACA 401 AAATCGACAA GGACAAGGCG AAAGACCGTT
ACGCGCTGGA GGCGTTTGTT 451 GCCCAAGTGC GCGCCGAATT TGAATTTGCG
GCGGCGGAGG CGGTCAGCGC 501 GAAACACGGA TTGCGGATTG CCAACCTGTT
GGAGCTGATT AAGCCGTATC 551 TGCCCGAAAG CGTGCCGATG TATCCCGAAG
ATATGGTTAC GGACAAATCG 601 GCGCGTTTTT TGGCGATGGA AATCGTGCGT
GAAAAATTGT TCCGCTATTT 651 GGGCGAGGAA TTGCCTTATG CGATGAACGT
CGAAGTGGAG CAGTTTGAAG 701 AGGAAGACGG TTTGAACCGC ATCTATATCG
CCGTTTTGGT CGATAAGGAA 751 AGCCAAAAGG CAATTTTAAT CGGTAAAGGC
GGAGAACGTT TGAAGAAAAT 801 TTCCACCGAA GCGCGGTTGG ATATGGAAAA
ACTGTTTGAT ACCAAAGTAT 851 TTTTGAAGGT CTGGGTCAAA GTCAAATCCG
GTTGGGCGGA CGACATCCGC 901 TTCCTGCGCG AGCTGGGTTT GTAG
This corresponds to the amino acid sequence <SEQ ID 2210; ORF
673>:
TABLE-US-02613 m673.pep 1 MDIETFLAGE RAAGGYRCGF VAIVGRPNVG
KSTLMNHLIG QKISITSKKA 51 QTTRNRVTGI YTDDTAQFVF VDTPGFQTDH
RNALNDRLNQ NVTEALGGVD 101 VVVFVVEAMR FTDADRVVLK QLPKHTPVIL
VVNKIDKDKA KDRYALEAFV 151 AQVRAEFEFA AAEAVSAKHG LRIANLLELI
KPYLPESVPM YPEDMVTDKS 201 ARFLAMEIVR EKLFRYLGEE LPYAMNVEVE
QFEEEDGLNR IYIAVLVDKE 251 SQKAILIGKG GERLKKISTE ARLDMEKLFD
TKVFLKVWVK VKSGWADDIR 301 FLRELGL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02614 m673/g673 98.4% identity in 307 aa overlap 10 20 30
40 50 60 m673.pep
MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g673
MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTGI 10 20
30 40 50 60 70 80 90 100 110 120 m673.pep
YTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVVVFVVEAMRFTDADRVVLK
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g673
YTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVVVFVVEAMRLTDADRVVLK 70 80
90 100 110 120 130 140 150 160 170 180 m673.pep
QLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFAAAEAVSAKHGLRIANLLELI
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||: g673
QLPKHTPVILVINKIDKDKAKDRYALEAFVAQVRAEFEFAAAEAVSAKHGLRIANLLELL 130
140 150 160 170 180 190 200 210 220 230 240 m673.pep
KPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEEDGLNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| g673
KPYLPESVPMYPEDMVIDKSARFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEGDGLNR 190
200 210 220 230 240 250 260 270 280 290 300 m673.pep
IYIAVLVDKESQKAILIGKGGERLKKISTEARLDMEKLFDTKVFLKVWVKVKSGWADDIR
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||| g673
IYIAVLVDKESQKAILIGKGGERLKKISTEARLDMEKLFDNKVFLKVWVKVKSGWADDIR 250
260 270 280 290 300 m673.pep FLRELGLX |||||||| g673 FLRELGLX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2211>:
TABLE-US-02615 a673.seq 1 ATGGATATTG AAACCTTCCT TGCAGGGGAA
CGCGCCGCCG ACGGATACCG 51 TTGCGGCTTC GTAGCGATTG TCGGCCGTCC
GAACGTGGGC AAATCAACGC 101 TGATGAATCA TCTCATCGGT CAGAAAATCA
GTATTACCAG CAAAAAGGCG 151 CAGACGACGC GCAACCGCGT AACGGGGATT
TATACCGACG ATACCGCGCA 201 GTTTGTGTTT GTCGATACGC CCGGTTTTCA
AACCGACCAC CGCAACGCGC 251 TCAACGACCG TTTGAATCAA AACGTTACCG
AGGCACTCGG CGGCGTGGAT 301 GTGGTGGTTT TCGTCGTGGA AGCGATGCGT
TTTACCGATG CCGACCGCGT 351 CGTGTTGAAA CAACTGCCCA AGCACACGCC
GGTCATTTTA GTGGTCAACA 401 AAATCGATAA GGACAAGGCG AAAGACCGTT
ACGCGCTGGA GGCGTTTGTT 451 GCCCAGGTGC GCGCCGAATT TGAATTTGCG
GCGGCGGAGG CGGTCAGCGC 501 GAAACACGGA TTGCGGATTG CCAACCTGTT
GGAGCTGATT AAGCCGTATC 551 TGCCCGAAAG CGTGCCGATG TATCCCGAAG
ATATGGTTAC GGACAAATCG 601 GCGCGTTTTT TAGCGATGGA AATCGTGCGT
GAAAAATTGT TCCGCTATTT 651 GGGCGAGGAA TTGCCTTATG CGATGAACGT
CGAAGTGGAG CAGTTTGAAG 701 AGGAAGACGG TTTGAACCGC ATCTATATCG
CCGTTTTGGT CGATAAGGAA 751 AGCCAAAAGG CGATTTTAAT CGGCAAAGGC
GGGGAGCGTT TGAAGAAAAT 801 TTCCACCGAA GCGCGGTTGG ATATGGAAAA
ACTGTTTGAT ACCAAAGTAT 851 TTTTGAAGGT CTGGGTCAAA GTCAAATCCG
GTTGGGCGGA CGACATCCGC 901 TTCCTGCGCG AGCTGGGTTT GTAG
This corresponds to the amino acid sequence <SEQ ID 2212; ORF
673.a>:
TABLE-US-02616 a673.pep 1 MDIETFLAGE RAADGYRCGF VAIVGRPNVG
KSTLMNHLIG QKISITSKKA 51 QTTRNRVTGI YTDDTAQFVF VDTPGFQTDH
RNALNDRLNQ NVTEALGGVD 101 VVVFVVEAMR FTDADRVVLK QLPKHTPVIL
VVNKIDKDKA KDRYALEAFV 151 AQVRAEFEFA AAEAVSAKHG LRIANLLELI
KPYLPESVPM YPEDMVTDKS 201 ARFLAMEIVR EKLFRYLGEE LPYAMNVEVE
QFEEEDGLNR IYIAVLVDKE 251 SQKAILIGKG GERLKKISTE ARLDMEKLFD
TKVFLKVWVK VKSGWADDIR 301 FLRELGL* m673/a673 99.7% identity in 307
aa overlap 10 20 30 40 50 60 m673.pep
MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTGI
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| a673
MDIETFLAGERAADGYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVIGI 10 20
30 40 50 60 70 80 90 100 110 120 m673.pep
YTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVVVFVVEAMRFTDADRVVLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a673
YTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVVVFVVEAMRFTDADRVVLK 70 80
90 100 110 120 130 140 150 160 170 180 m673.pep
QLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFAAAEAVSAKHGLRIANLLELI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a673
QLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFAAAEAVSAKHGLRIANLLELI 130
140 150 160 170 180 190 200 210 220 230 240 m673.pep
KPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEEDGLNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a673
KPYLPESVPMYPEDMVIDKSARFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEEDGLNR 190
200 210 220 230 240 250 260 270 280 290 300 m673.pep
IYIAVLVDKESQKAILIGKGGERLKKISTEARLDMEKLFDTKVFLKVWVKVKSGWADDIR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a673
IYIAVLVDKESQKAILIGKGGERLKKISTEARLDMEKLFDTKVFLKVWVKVKSGWADDIR 250
260 270 280 290 300 m673.pep FLRELGLX |||||||| a673 FLRELGLX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2213>:
TABLE-US-02617 g674.seq 1 ATGAAAACAG CCCGCCGCCG TTCCCGCGAG
CTTGCCGTAC AAGCCGTTTA 51 CCAATCCCTT ATCAACCGCA CCGCCGCGCC
CGAAATTGCT AAAAACATCC 101 GCGAAATGTC CGACTTTGCC AAAGCGGACG
AAGAATTGTT CAACAAACTC 151 TTCTTCGGCA CACAAACCAA TGCAGCGGAC
TACATCCAAA AAATCCGCCC 201 GCTGCTCGAC AGGGACGAAA AAGACCTCAA
CCCCATCGAA CGCGCCGTTT 251 TGCTGACCGC CTGCCACGAG CTTTCCGCTA
TGCCCGAAAC GCCCTACCCC 301 GTCATTATCA ACGAAGCCAT CGAAGTTACC
AAAACCTTCG GCGGCACGGA 351 CGGGCACAAA TTCGTCAACG GCATCCTCGA
CAAACTCGCC GCCCAAATCC 401 GCCCAGACGA GCCCAAACGC CGTTGA
This corresponds to the amino acid sequence <SEQ ID 2214; ORF
674.ng>:
TABLE-US-02618 g674.pep 1 MKTARRRSRE LAVQAVYQSL INRTAAPEIA
KNIREMSDFA KADEELFNKL 51 FFGTQTNAAD YIQKIRPLLD RDEKDLNPIE
RAVLLTACHE LSAMPETPYP 101 VIINEAIEVT KTFGGTDGHK FVNGILDKLA
AQIRPDEPKR R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2215>:
TABLE-US-02619 m674.seq 1 ATGAAAACAG CCCGCCGCCG TTCCCGCGAG
CTTGCCGTAC AAGCCGTTTA 51 CCAATCCCTT ATCAACCGCA CCGCCGCGCC
CGAAATTGCT AAAAACATCC 101 GCGAAATGTC CGACTTTGCC AAGGCAGACG
AAGAATTGTT CAACAAACTT 151 TTCTTCGGCA CGCAAACCAA TGCGGCAGAG
TATATCCGAC AAATCCGCCC 201 GCTACTTGAC AGGGACGAAA AAGACCTCAA
CCCCATCGAA CGCGCCGTTT 251 TGCTGACCGC CTGCCACGAG CTGTCCGCCA
TGCCCGAAAC GCCCTACCCC 301 GTCATTATCA ACGAAGCCAT CGAAGTTACC
AAAACCTTCG GCGGCACGGA 351 CGGGCACAAA TTCGTCAACG GCATCCTCGA
CAAACTCGCC GCCCAAATCC 401 GCCCCGACGA GCCCAAACGC CGTTGA
This corresponds to the amino acid sequence <SEQ ID 2216; ORF
674>:
TABLE-US-02620 m674.pep 1 MKTARRRSRE LAVQAVYQSL INRTAAPEIA
KNIREMSDFA KADEELFNKL 51 FFGTQTNAAE YIRQIRPLLD RDEKDLNPIE
RAVLLTACHE LSAMPETPYP 101 VIINEAIEVT KTFGGTDGHK FVNGILDKLA
AQIRPDEPKR R*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02621 m674/g674 97.9% identity in 141 aa overlap 10 20 30
40 50 60 m674.pep
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g674
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAAD 10 20
30 40 50 60 70 80 90 100 110 120 m674.pep
YIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHK
||::|||||||||||||||||||||||||||||||||||||||||||||||||||||||| g674
YIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVIKTFGGIDGHK 70 80
90 100 110 120 130 140 m674.pep FVNGILDKLAAQIRPDEPKRRX
|||||||||||||||||||||| g674 FVNGILDKLAAQIRPDEPKRRX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2217>:
TABLE-US-02622 a674.seq 1 ATGAAAACAG CCCGCCGCCG TTCCCGCGAG
CTTGCCGTAC AAGCCGTTTA 51 CCAATCCCTT ATCAACCGCA CCGCCGCGCC
CGAGATTGCT AAAAACATCC 101 GCGAAATGCC CGACTTTGCC AAGGCAGACG
AAGAATTGTT CAACAAACTT 151 TTCTTCGGCA CGCAAACCAA TGCGGCAGAG
TACATCCGAC AAATCCGCCC 201 CCTGCTCGAC CGCGACGAAA AAGACCTCAA
CCCCATCGAA CGCGCCGTCC 251 TGCTGACCGC CTGCCACGAG CTGTCCGCCA
TGCCCGAAAC GCCCTACCCC 301 GTCATCATCA ACGAAGCCAT CGAAGTAACC
AAAACCTTCG GCGGCACGGA 351 CGGGCACAAA TTCGTCAACG GCATCCTCGA
CAAACTCGCC GCCCAAATCC 401 GTCCCGACGA GCCCAAACGC CGTTGA
This corresponds to the amino acid sequence <SEQ ID 2218; ORF
674.a>:
TABLE-US-02623 a674.pep 1 MKTARRRSRE LAVQAVYQSL INRTAAPEIA
KNIREMPDFA KADEELFNKL 51 FFGTQTNAAE YIRQIRPLLD RDEKDLNPIE
RAVLLTACHE LSAMPETPYP 101 VIINEAIEVT KTFGGTDGHK FVNGILDKLA
AQIRPDEPKR R* m674/a674 99.3% identity in 141 aa overlap 10 20 30
40 50 60 m674.pep
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAAE
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| a674
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADEELFNKLFFGTQTNAAE 10 20
30 40 50 60 70 80 90 100 110 120 m674.pep
YIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a674
YIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVIKTFGGIDGHK 70 80
90 100 110 120 130 140 m674.pep FVNGILDKLAAQIRPDEPKRRX
|||||||||||||||||||||| a674 FVNGILDKLAAQIRPDEPKRRX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2219>:
TABLE-US-02624 g675.seq 1 ATGAACACCA TCGCCCCcaa cctcgacgGC
AAACACCTCC GCATCGGCAT 51 CGTACAGGCA CGCTTCACCA ACGAAATCGG
CAGCCAAATG CTCAAAGTCT 101 GCTGCCGCAC CCTCCAAGAA TTGGGCGTAG
CAGACGAAAa catcaccgtc 151 gCCACCGTAC CCGGCGCGCT TGAAATCCCC
ATCGCGCTGA TGAACTTTGC 201 CTCTTCCGAA AAATTTGACG CACTGATTGC
CATCGGCGTC GTCATCCGTG 251 GCGAAACCTA CCATTTCGAG CTGGTTGCCA
ACGAATCCGG CGCAGGGATC 301 GGCCGCGTCG CACTCGACTA CAACATCCCG
ATTGCCAACG CCGTCCTGAC 351 CACCGAAAAC GACGCGCAGG CAATTGAACG
GATTGGAGAA AAAGCCTCGG 401 ATGCCGCCAA AGTCGCCGTA GAATGCGCCA
ACCTCGTCAA CCTTCTGCTC 451 GAAGAACAGT TTGAAGACGA AGAATAA
This corresponds to the amino acid sequence <SEQ ID 2220; ORF
675.ng>:
TABLE-US-02625 g675.pep 1 MNTIAPNLDG KHLRIGIVQA RFTNEIGSQM
LKVCCRTLQE LGVADENITV 51 ATVPGALEIP IALMNFASSE KFDALIAIGV
VIRGETYHFE LVANESGAGI 101 GRVALDYNIP IANAVLTTEN DAQAIERIGE
KASDAAKVAV ECANLVNLLL 151 EEQFEDEE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2221>:
TABLE-US-02626 m675.seq 1 ATGAACACCA TCGCCCCCAA CCTCGACGGC
AAACACCTCC GCATCGGCAT 51 CGTACAGGCA CGCTTCACCA ACGAAATCGG
CAGCGAAATG CTCAAAGTCT 101 GCTGCCGCAC CCTCCAAGAA TTGGGCGTGG
CAGACGAAAA CATTACCGTC 151 GCCACCGTAC CCGGCGCGCT TGAAATCCCC
ATCGCGCTGA TGAACTTTGC 201 CTCTTCCGAA AAGTTTGACG CACTGATTGC
CATCGGCGTC GTCATCCGTG 251 GCGAAACCTA CCATTTCGAG CTGGTTTCCA
ACGAATCCGG AGCAGGCGTC 301 AGCCGCGTCG CACTCGACTA CAATATCCCG
ATTGCCAATG CCGTCCTAAC 351 CACCGAAAAC GACGCGCAGG CAATCGAACG
GATTGAAGAA AAAGCCTCGG 401 ATGCCGCCAA AGTCGCCGTC GAATGCGCCA
ACCTCGTCAA CCTGCTGCTC 451 GAAGAACAGT TTGAAGACGA AGAATAA
This corresponds to the amino acid sequence <SEQ ID 2222; ORF
675>:
TABLE-US-02627 m675.pep 1 MNTIAPNLDG KHLRIGIVQA RFTNEIGSEM
LKVCCRTLQE LGVADENITV 51 ATVPGALEIP IALMNFASSE KFDALIAIGV
VIRGETYHFE LVSNESGAGV 101 SRVALDYNIP IANAVLTTEN DAQAIERIEE
KASDAAKVAV ECANLVNLLL 151 EEQFEDEE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02628 m675/g675 96.8% identity in 158 aa overlap 10 20 30
40 50 60 m675.pep
MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVADENITVATVPGALEIP
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g675
MNTIAPNLDGKHLRIGIVQARFTNEIGSQMLKVCCRTLQELGVADENITVATVPGALEIP 10 20
30 40 50 60 70 80 90 100 110 120 m675.pep
IALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSRVALDYNIPIANAVLTTEN
||||||||||||||||||||||||||||||||:||||||::||||||||||||||||||| g675
IALMNFASSEKFDALIAIGVVIRGETYHFELVANESGAGIGRVALDYNIPIANAVLTTEN 70 80
90 100 110 120 130 140 150 159 m675.pep
DAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEEX ||||||||
|||||||||||||||||||||||||||||| g675
DAQAIERIGEKASDAAKVAVECANLVNLLLEEQFEDEEX 130 140 150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2223>:
TABLE-US-02629 a675.seq 1 ATGAACACCA TCGCCCCCAA CCTCGACGGC
AAACACCTCC GCATCGGCAT 51 CGTACAGGCA CGCTTCACCA ACGAAATCGG
CAGCGAAATG CTCAAAGTCT 101 GCTGCCGCAC CCTCCAAGAA TTGGGCGTGG
CAGACGAAAA CATTACCGTC 151 GCCACCGTAC CCGGCGCGCT TGAAATCCCC
ATCGCGCTGA TGAACTTTGC 201 CTCTTCTGAA AAATTTGACG CACTGATTGC
CATCGGCGTC GTTATCCGTG 251 GCGAAACCTA CCATTTCGAG CTGGTTTCCA
ACGAATCCGG AGCAGGGGTC 301 AGCCGCGTCG CACTCGACTA CAACATCCCG
ATTGCCAATG CCGTCCTGAC 351 CACGGAAAAC GACGCACAGG CAATCGAACG
GATTGAAGAA AAAGCCTCGG 401 ATGCCGCCAA AGTCGCCGTA GAATGCGCCA
ACCTCGTCAA CCTCCTGCTC 451 GAAGAACAGT TTGAAGACGA AGAATAA
This corresponds to the amino acid sequence <SEQ ID 2224; ORF
675.a>:
TABLE-US-02630 a675.pep 1 MNTIAPNLDG KHLRIGIVQA RFTNEIGSEM
LKVCCRTLQE LGVADENITV 51 ATVPGALEIP IALMNFASSE KFDALIAIGV
VIRGETYHFE LVSNESGAGV 101 SRVALDYNIP IANAVLTTEN DAQAIERIEE
KASDAAKVAV ECANLVNLLL 151 EEQFEDEE* m675/a675 100.0% identity in
158 aa overlap 10 20 30 40 50 60 m675.pep
MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVADENITVATVPGALEIP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a675
MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVADENITVATVPGALEIP 10 20
30 40 50 60 70 80 90 100 110 120 m675.pep
IALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSRVALDYNIPIANAVLTTEN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a675
IALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSRVALDYNIPIANAVLTTEN 70 80
90 100 110 120 130 140 150 159 m675.pep
DAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEEX
||||||||||||||||||||||||||||||||||||||| a675
DAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEEX 130 140 150
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2225>:
TABLE-US-02631 g677.seq 1 ATGCCGCAGA TTTTGGTGCG GATTTTCCTC
ATTCGGTATT CCTTTATTtg 51 ggAAACGGTG CGCTTGTGCC GTTTCAGACG
GCATTCCCGA TCAGTCGATT 101 TTGATGTATT CGACAGAAAG GATTTCAATT
TCCTCACGGC CTTCCGGCGT 151 GTTCAAAACC ACTTCGTCGC CTTCGCGCGC
TTTAATCAGG CAACGCGCCA 201 ACGGCGAAAT CCAAGAAATT TTGTTTTGCG
CGGTATCGAT TTCATCGACG 251 CCGACGATTT TGACGGTTTG CTCGCGCCCG
TCGCCGCGCA ACAGACCGAC 301 GGTCGCGCCG AAAAATACTT GGTCGGTCGC
TTCGCGCAAT TCGGGATCGA 351 CGACGACGGC AGCCTCCAAA CGTTTGGTCA
GGAAACGGAT GCGGCGGTCG 401 ATTTCGCGCA TACGGCGTTT GCCGTAAAGA
TAGTCGCCGT TTTCGCTGCG 451 GTCGCCGTTG CCTGCCGCCC AGTTGACGAT
TTGGACGATT TCGGGGCGTT 501 CTTTATTGAC CAGTTGATAA AGCTCGTCTT
TCAATGCCTG CCATCCGGCG 551 GGCGTAATGT AGTTTTTGGT TTCGGTACTC
ATATTGTGTG CGGATGA
This corresponds to the amino acid sequence <SEQ ID 2226; ORF
677.ng>:
TABLE-US-02632 g677.pep 1 MPQILVRIFL IRYSFIWETV RLCRFRRHSR
SVDFDVFDRK DFNFLTAFRR 51 VQNHFVAFAR FNQATRQRRN PRNFVLRGID
FIDADDFDGL LAPVAAQQTD 101 GRAEKYLVGR FAQFGIDDDG SLQTFGQETD
AAVDFAHTAF AVKIVAVFAA 151 VAVACRPVDD LDDFGAFFID QLIKLVFQCL
PSGGRNVVFG FGTHIVCG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2227>:
TABLE-US-02633 m677.seq 1 ATGCCGCAGA TTTTGGTGCG GATTTTCCTC
ATTCGGTATT CCTTTATTTG 51 GGAAACGGCG CGCTTTTGCC GTTTCAGACG
GCATTCCCGA TCAGTCGATT 101 TTGATGTATT CGACAGAAAG GATTTCAATT
TCCTCACGCC CTTCCGGCGT 151 GTTCAAAACC ACTTCGTCGC CTTCGCGCGC
TTTAATCAGA CAACGAGCCA 201 GCGGCGAAAT CCAAGAAATT TTGTTTTGCG
CGGTATCGAT TTCATCGATG 251 CCGACGATTT TGACGGTTTG CTCGCGCCCG
TCGTCGCGCA ACAGTCCGAC 301 CGTCGCGCCG AAAAACACTT GGTCGGTCGC
TTCGCGCAAT TCGGGATCGA 351 CGACGACGGC AGCCTCCAAA CGTTTGGTCA
GGAAACGGAT GCGGCGGTCG 401 ATTTCGCGCA TACGGCGTTT GCCGTAAAGA
TAGTCGCCGT TTTCGCTGCG 451 GTCGCCGTTG CCTGCCGCCC AGTTGACGAT
TTGGACGATT TCGGGGCGTT 501 CTTTGTTGAC CAGTTGATAA AGCTCGTCTT
TCAATGCCTG CCATCCGGCG 551 GGCGTAATGT AGTTTTTGGT TTCGGTACTC
ATATTGTGTG CGGATGA
This corresponds to the amino acid sequence <SEQ ID 2228; ORF
677>:
TABLE-US-02634 m677.pep 1 MPQILVRIFL IRYSFIWETA RFCRFRRHSR
SVDFDVFDRK DFNFLTPFRR 51 VQNHFVAFAR FNQTTSQRRN PRNFVLRGID
FIDADDFDGL LAPVVAQQSD 101 RRAEKHLVGR FAQFGIDDDG SLQTFGQETD
AAVDFAHTAF AVKIVAVFAA 151 VAVACRPVDD LDDFGAFFVD QLIKLVFQCL
PSGGRNVVFG FGTHIVCG*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02635 m677/g677 94.9% identity in 198 aa overlap 10 20 30
40 50 60 m677.pep
MPQILVRIFLIRYSFIWETARFCRFRRHSRSVDFDVFDRKDFNFLTPFRRVQNHFVAFAR
|||||||||||||||||||:|:|||||||||||||||||||||||| ||||||||||||| g677
MPQILVRIFLIRYSFIWETVRLCRFRRHSRSVDFDVFDRKDFNFLTAFRRVQNHFVAFAR 10 20
30 40 50 60 70 80 90 100 110 120 m677.pep
FNQTTSQRRNPRNFVLRGIDFIDADDFDGLLAPVVAQQSDRRAEKHLVGRFAQFGIDDDG |||:|
||||||||||||||||||||||||||||:|||:| ||||:|||||||||||||| g677
FNQATRQRRNPRNFVLRGIDFIDADDFDGLLAPVAAQQTDGRAEKYLVGRFAQFGIDDDG 70 80
90 100 110 120 130 140 150 160 170 180 m677.pep
SLQTFGQETDAAVDFAHTAFAVKIVAVFAAVAVACRPVDDLDDFGAFFVDQLIKLVFQCL
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| g677
SLQTFGQETDAAVDFAHTAFAVKIVAVFAAVAVACRPVDDLDDFGAFFIDQLIKLVFQCL 130
140 150 160 170 180 190 199 m677.pep PSGGRNVVFGFGTHIVCGX
||||||||||||||||||| g677 PSGGRNVVFGFGTHIVCGX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2229>:
TABLE-US-02636 a677.seq 1 ATGCCGCAGA TTTTGGTGCG GATTTTCCTC
ATTCGGTATT CCTTTATTTG 51 GGAAACGGCG CGTTTGTGCC GTTTCAGACG
GCATTCCCGA TCAGTCGATT 101 TTGATGTATT CGACAGAAAG GATTTCAATT
TCCTCACGCC CTTCCGGCGT 151 GTTTAAAACC ACTTCGTCGC CTTCACGCGC
TTTAATCAGA CAACGAGCCA 201 GCGGCGAAAT CCAAGAAATT TTGTTTTGCG
CGGTATCGAT TTCATCGATG 251 CCGACGATTT TGACGGTTTG CTCGCGCCCG
TCGCCGCGCA ACAGACCGAC 301 GGTCGCGCCG AAAAACACTT GGTCGGTCGC
TTCGCGCAAT TCGGGATCAA 351 CGACGACGGC GGCTTCCAAA CGCTTGGTCA
GGAAACGGAT GCGGCGGTCG 401 ATTTCGCGCA TACGGCGTTT GCCGTAAAGG
TAGTCGCCGT TTTCGCTGCG 451 GTCGCCGTTG CCTGCCGCCC AGTTGACGAT
TTGGACGATT TCGGGGCGTT 501 CTTTATTAAC CAGTTGATAA AGCTCGTCTT
TCAATGCCTG CCATCCGGCG 551 GGCGTAATGT AGTTTTTGGT TTCGGTACTC
ATATTGTGTG CGGATGA
This corresponds to the amino acid sequence <SEQ ID 2230; ORF
677.a>:
TABLE-US-02637 a677.pep 1 MPQILVRIFL IRYSFIWETA RLCRFRRHSR
SVDFDVFDRK DFNFLTPFRR 51 V*NHFVAFTR FNQTTSQRRN PRNFVLRGID
FIDADDFDGL LAPVAAQQTD 101 GRAEKHLVGR FAQFGINDDG GFQTLGQETD
AAVDFAHTAF AVKVVAVFAA 151 VAVACRPVDD LDDFGAFFIN QLIKLVFQCL
PSGGRNVVFG FGTHIVCG* m677/a677 93.4% identity in 198 aa overlap 10
20 30 40 50 60 m677.pep
MPQILVRIFLIRYSFIWETARFCRFRRHSRSVDFDVFDRKDFNFLTPFRRVQNHFVAFAR
|||||||||||||||||||||:||||||||||||||||||||||||||||| ||||||:| a677
MPQILVRIFLIRYSFIWETARLCRFRRHSRSVDFDVFDRKDFNFLTPFRRVXNHFVAFTR 10 20
30 40 50 60 70 80 90 100 110 120 m677.pep
FNQTTSQRRNPRNFVLRGIDFIDADDFDGLLAPVVAQQSDRRAEKHLVGRFAQFGIDDDG
||||||||||||||||||||||||||||||||||:|||:| |||||||||||||||:||| a677
FNQTTSQRRNPRNFVLRGIDFIDADDFDGLLAPVAAQQTDGRAEKHLVGRFAQFGINDDG 70 80
90 100 110 120 130 140 150 160 170 180 m677.pep
SLQTFGQETDAAVDFAHTAFAVKIVAVFAAVAVACRPVDDLDDFGAFFVDQLIKLVFQCL
::||:||||||||||||||||||:||||||||||||||||||||||||::|||||||||| a677
GFQTLGQETDAAVDFAHTAFAVKVVAVFAAVAVACRPVDDLDDFGAFFINQLIKLVFQCL 130
140 150 160 170 180 190 199 m677.pep PSGGRNVVFGFGTHIVCGX
||||||||||||||||||| a677 PSGGRNVVFGFGTHIVCGX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2231>:
TABLE-US-02638 g678.seq 1 ATGAATAGCC TCCCCATTGC CGACCTCCTC
GCCTccgCCG TCATCGCCGC 51 CTGCATCGTC ATTTCCACGA TGCGCGGCGT
GATTGCGGAA GCAggttcGA 101 TGGTgGCATG ggtggTTTcc tTCTTTTttg
ccAAACTCTt tGCCGCACcc 151 ttcgccgACC TCGCCTTTGc ctCGTTCCAA
ccccgccTGT TTGCAttggc 201 tCTGTCATTC ATTTCCCTGT TCGTCATTGC
CTGTCTGATC CAGAAAATGC 251 TCCGTTCGCT GCTGACCGGC GCAGTTTCGG
CGGTCGGTCT GGGCTTTGCC 301 AACCGCATTT TGGGCGGTGT ATTCGGTGCA
TTGAAAGGCG TTTTGATTGT 351 TACCCTGCTG ATCATGCTTG CTTCAAAAAC
CGACCTGCCC GATACCGAAG 401 AATGGCAACA GTCCTATACC GTACCGTTTT
TCGTATCGCT TTCCGAAGCG 451 GTGTTAAACC atacggaCAA CGCacccgaa
tCCCtcgacg acgactaa
This corresponds to the amino acid sequence <SEQ ID 2232; ORF
678.ng>:
TABLE-US-02639 g678.pep 1 MNSLPIADLL ASAVIAACIV ISTMRGVIAE
AGSMVAWVVS FFFAKLFAAP 51 FADLAFASFQ PRLFALALSF ISLFVIACLI
QKMLRSLLTG AVSAVGLGFA 101 NRILGGVFGA LKGVLIVTLL IMLASKTDLP
DTEEWQQSYT VPFFVSLSEA 151 VLNHTDNAPE SLDDD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2233>:
TABLE-US-02640 m678.seq 1 ATGAATAGCC TCCCCATTGC CGACCTCCTC
GTCTCCGCCG TCATCGCCGC 51 CTGCATCGTG CTATCCGCGA TGCGCGGCGT
GATTGCGGAG GCAGGCTCAA 101 TGGCGGCATG GGTGGTTTCC TTCTTTTTCG
CCAAACTCTT TGCCGCCTCC 151 TTCGCCGACC TCGCCTTTGC CTCGTTCCAA
CCCCGCCTGT TTGCATTGGC 201 TCTGTCGTTC ATTTCCCTGT TCGTCATTGC
CTGTCTGATC CAGAAAATGC 251 TCCGTTCGCT GCTGACCAGC GCAGTTTCGG
CGGTCGGTTT GGGCTTTGCC 301 AACCGCATTT TGGGCGGCGT ATTCGGTGCA
TTGAAAGGCG TTTTGATTGT 351 TACCCTGCTG GTCATGCTTG CTTCAAAAAC
CGACCTGCCC GATACCGAAG 401 AATGGCGGCA ATCTTACACA CTGCCGTTTT
TCGTATCGCT TTCCGAAGCC 451 GTGTTGAACC ATAGCGGCGG CACGGCGGAA
ACTCCGGAAG ACGATTGA
This corresponds to the amino acid sequence <SEQ ID 2234; ORF
678>:
TABLE-US-02641 m678.pep 1 MNSLPIADLL VSAVIAACIV LSAMRGVIAE
AGSMAAWVVS FFFAKLFAAS 51 FADLAFASFQ PRLFALALSF ISLFVIACLI
QKMLRSLLTS AVSAVGLGFA 101 NRILGGVFGA LKGVLIVTLL VMLASKTDLP
DTEEWRQSYT LPFFVSLSEA 151 VLNHSGGTAE TPEDD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-02642 m678/g678 89.7% identity in 165 aa overlap 10 20 30
40 50 60 m678.pep
MNSLPIADLLVSAVIAACIVLSAMRGVIAEAGSMAAWVVSFFFAKLFAASFADLAFASFQ
||||||||||:|||||||||:|:|||||||||||:|||||||||||||| |||||||||| g678
MNSLPIADLLASAVIAACIVISTMRGVIAEAGSMVAWVVSFFFAKLFAAPFADLAFASFQ 10 20
30 40 50 60 70 80 90 100 110 120 m678.pep
PRLFALALSFISLFVIACLIQKMLRSLLTSAVSAVGLGFANRILGGVFGALKGVLIVTLL
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| g678
PRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANRILGGVFGALKGVLIVTLL 70 80
90 100 110 120 130 140 150 160 m678.pep
VMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAETPEDDX
:||||||||||||||:||||:|||||||||||||: :: |: :||| g678
IMLASKTDLPDTEEWQQSYTVPFFVSLSEAVLNHTDNAPESLDDDX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2235>:
TABLE-US-02643 a678.seq 1 ATGAATAACC TCCCCGTTGC CGACCTCCTC
GTCTCCGCCA TCATCGCCGC 51 CTGCATCGTG CTATCCGCGA TGCGCGGCGT
GATTGCGGAG GCTGGCTCAA 101 TGGCGGCATG GGTGGTTGCC TTTTTTTTCG
CCAAACTCTT TGCCGCACCC 151 TTCGCCGACA TCGCCTTTGC ATCGTTCCAA
CCCCGCCTGT TTGCATTGGC 201 TCTGTCGTTC ATTTCCCTAT TCGTCATTGC
CTGTCTGATC CAGAAAATAC 251 TCCGCTCGCT GCTGACCGGG GCAGTTTCGG
CGGTCGGTTT GGGCTTTGCC 301 AACCGCATTT TGGGCGGCGT ATTCGGTGCA
TTGAAAGGCA TTTTGATTAT 351 TACCCTGCTG GTCATGCTCG CTTCAAAAAC
CGACCTGCCC GATACCGAAG 401 AATGGCGGCA ATCTTACACA CTGCCGTTTT
TCGTATCGCT TTCCGAAGCC 451 GTGTTGAACC ATAGCGGCGG CACGGCGGAA
ACTCCGGAAG ACGATTGA
This corresponds to the amino acid sequence <SEQ ID 2236; ORF
678.a>:
TABLE-US-02644 a678.pep 1 MNNLPVADLL VSAIIAACIV LSAMRGVIAE
AGSMAAWVVA FFFAKLFAAP 51 FADIAFASFQ PRLFALALSF ISLFVIACLI
QKILRSLLTG AVSAVGLGFA 101 NRILGGVFGA LKGILIITLL VMLASKTDLP
DTEEWRQSYT LPFFVSLSEA 151 VLNHSGGTAE TPEDD* m678/a678 93.9%
identity in 165 aa overlap 10 20 30 40 50 60 m678.pep
MNSLPIADLLVSAVIAACIVLSAMRGVIAEAGSMAAWVVSFFFAKLFAASFADLAFASFQ
||:||:|||||||:|||||||||||||||||||||||||:||||||||| |||:|||||| a678
MNNLPVADLLVSAIIAACIVLSAMRGVIAEAGSMAAWVVAFFFAKLFAAPFADIAFASFQ 10 20
30 40 50 60 70 80 90 100 110 120 m678.pep
PRLFALALSFISLFVIACLIQKMLRSLLTSAVSAVGLGFANRILGGVFGALKGVLIVTLL
||||||||||||||||||||||:||||||:|||||||||||||||||||||||:||:||| a678
PRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANRILGGVFGALKGILIITLL 70 80
90 100 110 120 130 140 150 160 m678.pep
VMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAETPEDDX
|||||||||||||||||||||||||||||||||||||||||||||| a678
VMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAETPEDDX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2237>:
TABLE-US-02645 g680.seq 1 ATGACGAAGG GCAGTTCGGC GATGTCCAGC
CCACGCGCGG CGATATCGGT 51 GGCGACGAGG ACGCGCAGGC TGCCGTCTTT
GAAGGCGTTG AGTGTTTCGA 101 GCCTGCTTTG TTGGGAACGG TCGCCGTGTA
TCGCCTGTGC GGACAGGTTG 151 CGGCGCACCA GTTCGCGCGT TACGCGGTCG
ACGCTTTGTT TGGTtttgCA 201 AAAGACGATA ACTTGGTTCA TATGCAGATC
GACAATCAGC CGTTCGAGCA 251 GGTTGCGCTT TTGGAAGGTA TCGACGGCGA
TGATGTgttg ttcGACGTTG 301 GCGTTGGTGG TGTTTTGGGC GGCAACCTCG
ACGGTTTCGG GCGCGTTCAT 351 GAAGTCTTGC GCCAGTTTGC GTATCGGTGC
GGAGAAGGTG GCGGAAAAGA 401 GCAGGGTTTG GCGTTGGCGG GGCAGCATCT
GCATGATTTT GCGGATGTCG 451 TCGATAAACC CCATATCCAA CATGCGGTCT
GCTTCGTCCA GAACGACGAT 501 TTCGGCTTTG TTTAAACTGA TGTTTTTCTG
TTTCACATGG TCGAGCAGCC 551 GTCCGACGGT GGCGACGACT ATTTCGCAGC
CGGCACGCAG GTCGGCGGTT 601 TGTTTGTCCA TGTTGACACC GCCGAAGAGG
ACGGTATGCC GCAGCGGCAG 651 GTTTTTAATg tag
This corresponds to the amino acid sequence <SEQ ID 2238; ORF
680.ng>:
TABLE-US-02646 g680.pep 1 MTKGSSAMSS PRAAISVATR TRRLPSLKAL
SVSSLLCWER SPCIACADRL 51 RRTSSRVTRS TLCLVLQKTI TWFICRSTIS
RSSRLRFWKV STAMMCCSTL 101 ALVVFWAATS TVSGAFMKSC ASLRIGAEKV
AEKSRVWRWR GSICMILRMS 151 SINPISNMRS ASSRTTISAL FKLMFFCFTW
SSSRPTVATT ISQPARRSAV 201 CLSMLTPPKR TVCRSGRFLM *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2239>:
TABLE-US-02647 m680.seq 1 ATGACGAAGG GCAGTTCGGC AATGTCCAGC
CCGCGCGCGG CGATGTCGGT 51 GGCGACGAGG ACGCGCAGGT TGCCGTCTTT
GAAGGCGTTG AGTGTTTCGA 101 GCCGGCTTTG TTGGGAACGG TCGCCGTGTA
TCGCCTGTGC GGACAGGTTG 151 CGGCGCACCA GTTCGCGCGT TACGCGGTCG
ACGCTTTGTT TGGTTTTGCA 201 GAACACGATG ACCTGGTTCA TATGCAAATC
GACAATCAGC CGTTCGAGCA 251 GGTTGCGCTT CTGAATGGTA TCGACGGCGA
TGATGTGCTG CTCGACGTTG 301 GCGTTGGTGG TGTTTTGCGC GGCGACTTCG
ACGGTTTCGG GCGCGTTCAT 351 GAAGTCTTGC GCCAGTTTGC GTATCGGGGC
GGAGAAGGTG GCGGAAAAGA 401 GCAGGGTTTG GCGTTGGCGG GGCAGCATCT
GCATGATTTT GCGGATGTCG 451 TCGATAAAAC CCATATCCAG CATACGGTCG
GCTTCGTCCA AAACGACGAT 501 TTCGACTTTG TTCAAATGGA TGTTTTTCTG
TTTCACGTGG TCGAGCAGCC 551 GTCCGACGGT GGCGACGACG ATTTCGCAGC
CGGCACGCAG GTCGGCGGTC 601 TGTTTGTCCA TATTCATACC GCCGAACAAG
ACGGTGTGGC GCAGCGGCAG 651 GTTTTTGATG TAG
This corresponds to the amino acid sequence <SEQ ID 2240; ORF
680>:
TABLE-US-02648 m680.pep 1 MTKGSSAMSS PRAAMSVATR TRRLPSLKAL
SVSSRLCWER SPCIACADRL 51 RRTSSRVTRS TLCLVLQNTM TWFICKSTIS
RSSRLRF*MV STAMMCCSTL 101 ALVVFCAATS TVSGAFMKSC ASLRIGAEKV
AEKSRVWRWR GSICMILRMS 151 SIKPISSIRS ASSKTTISTL FKWMFFCFTW
SSSRPTVATT ISQPARRSAV 201 CLSIFIPPNK TVWRSGRFLM *
Computer analysis of this amino acid sequence gave the following
results:
TABLE-US-02649 m680/g680 90.9% identity in 220 aa overlap 10 20 30
40 50 60 m680.pep
MTKGSSAMSSPRAAMSVATRTRRLPSLKALSVSSRLCWERSPCIACADRLRRTSSRVTRS
||||||||||||||:||||||||||||||||||| ||||||||||||||||||||||||| g680
MTKGSSAMSSPRAAISVATRTRRLPSLKALSVSSLLCWERSPCIACADRLRRTSSRVTRS 10 20
30 40 50 60 70 80 90 100 110 120 m680.pep
TLCLVLQNTMTWFICKSTISRSSRLRFXMVSTAMMCCSTLALVVFCAATSTVSGAFMKSC
|||||||:|:|||||:||||||||||| |||||||||||||||| |||||||||||||| g680
TLCLVLQKTITWFICRSTISRSSRLRFWKVSTAMMCCSTLALVVFWAATSTVSGAFMKSC 70 80
90 100 110 120 130 140 150 160 170 180 m680.pep
ASLRIGAEKVAEKSRVWRWRGSICMILRMSSIKPISSIRSASSKTTISTLFKWMFFCFTW
||||||||||||||||||||||||||||||||:|||::|||||:||||:||| ||||||| g680
ASLRIGAEKVAEKSRVWRWRGSICMILRMSSINPISNMRSASSRTTISALFKLMFFCFTW 130
140 150 160 170 180 190 200 210 220 m680.pep
SSSRPTVATTISQPARRSAVCLSIFIPPNKTVWRSGRFLMX |||||||||||||||||||||||::
||::|| |||||||| g680 SSSRPTVATTISQPARRSAVCLSMLTPPKRTVCRSGRFLMX 190
200 210 220
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2241>:
TABLE-US-02650 a680.seq 1 ATGACGAAGG GCAGTTCGGC AATATCCAGC
CCCCGCGCGG CGATATCGGT 51 GGCGACGAGG ACGCGCAGGT TGCCGTCTTT
GAAGGCGTTG AGTGTTTCGA 101 GCCGGCTTTG TTGGGAACGG TCGCCGTGTA
TCGCCTGTGC GGACAGGTTG 151 CGGCGCACCA GTTCGCGCGT TACGCGGTCG
ACGCTTTGTT TGGTTTTGCA 201 GAACACGATG ACCTGGTTCA TATGCAAATC
GACAATCAGC CGTTCGAGCA 251 GGTTGCGCTT CTGAATGGTA TCGACGGCGA
TGATGTGCTG CTCGACGTTG 301 GCGTTGGTGG TGTCTTGCGC GGCGACTTCG
ACGGTTTCGG GCGCGTTCAT 351 GAAGTCTTGC GCCAGTTTGC GTATCGGGGC
GGAGAAGGTG GCGGAAAAGA 401 GCAGGGTTTG GCGTTGGCGG GGCAGCATCT
GCATGATTTT GCGGATGTCG 451 TCGATAAAAC CCATATCCAG CATACGGTCG
GCTTCGTCCA AAACGACGAT 501 TTCGACTTTG TTCAAATGGA TGTTTTTCTG
TTTCACGTGG TCGAGCAGCC 551 GTCCGACGGT GGCGACGACG ATTTCGCAGC
CGGCACGCAG GTCGGCGGTC 601 TGTTTGTCCA TATTCATACC GCCGAACAAG
ACGGTGTGGC GCAGCGGCAG 651 GTTTTTGATG TAG
This corresponds to the amino acid sequence <SEQ ID 2242; ORF
680.a>:
TABLE-US-02651 a680.pep 1 MTKGSSAISS PRAAISVATR TRRLPSLKAL
SVSSRLCWER SPCIACADRL 51 RRTSSRVTRS TLCLVLQNTM TWFICKSTIS
RSSRLRF*MV STAMMCCSTL 101 ALVVSCAATS TVSGAFMKSC ASLRIGAEKV
AEKSRVWRWR GSICMILRMS 151 SIKPISSIRS ASSKTTISTL FKWMFFCFTW
SSSRPTVATT ISQPARRSAV 201 CLSIFIPPNK TVWRSGRFLM * m680/a680 98.6%
identity in 220 aa overlap 10 20 30 40 50 60 m680.pep
MTKGSSAMSSPRAAMSVATRTRRLPSLKALSVSSRLCWERSPCIACADRLRRTSSRVTRS
|||||||:||||||:||||||||||||||||||||||||||||||||||||||||||||| a680
MTKGSSAISSPRAAISVATRTRRLPSLKALSVSSRLCWERSPCIACADRLRRTSSRVTRS 10 20
30 40 50 60 70 80 90 100 110 120 m680.pep
TLCLVLQNTMTWFICKSTISRSSRLRFXMVSTAMMCCSTLALVVFCAATSTVSGAFMKSC
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| a680
TLCLVLQNTMTWFICKSTISRSSRLRFXMVSTAMMCCSTLALVVSCAATSTVSGAFMKSC 70 80
90 100 110 120 130 140 150 160 170 180 m680.pep
ASLRIGAEKVAEKSRVWRWRGSICMILRMSSIKPISSIRSASSKTTISTLFKWMFFCFTW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a680
ASLRIGAEKVAEKSRVWRWRGSICMILRMSSIKPISSIRSASSKTTISTLFKWMFFCFTW 130
140 150 160 170 180 190 200 210 220 m680.pep
SSSRPTVATTISQPARRSAVCLSIFIPPNKTVWRSGRFLMX
||||||||||||||||||||||||||||||||||||||||| a680
SSSRPTVATTISQPARRSAVCLSIFIPPNKTVWRSGRFLMX 190 200 210 220
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2243>:
TABLE-US-02652 g681.seq 1 ATGACGACGC CGATGGCAAT CAGTGCGTCA
AATTTTTCGG AAGAGGCAAA 51 GTTCATCAGC GCGATGGGGA TTTCAAGCGC
GCCGGGTACG GTGGcgacgg 101 tgatgtTTTC GTCTGCTACG CCCAATTCTT
GGAGGGTGCG GCAGCAGACT 151 TTGAGCATTT GGCTGCCGAT TTCGTTGGTG
AAGCGTGCCT GTACGATGCC 201 GATGCGGAGG TGTTTGCcgt cgaggttgGG
GGCGATGGTG TTCATTGGGT 251 GTCCTTTGGT ATTCGGGGTT TCGGAATGCC
GTCTGAAGGT TTCAGTCTTG 301 CGGCTGCCAG TCGGCAACGG TTTGGAATGT
GCCGTCTTCG GCAAGCTCCC 351 ACGCGCTGCC TTCGGGTTGG GAAAGCAGTG
CGGCGGTTTC AGGGTTGGTT 401 TTGGTGATGT CGGCGAGGCT GACGATGCTG
AAGTTGTCGG GGTCGTCGGT 451 GTATTCGTCG GTTTCGTCGC CGCTGAAGAA
ACGCCAGCCG CTGTCGTTTT 501 CAAAAACGGG GGCTTCGCGG TAAAGGAAGC
CGACGGGCCG GTTTTGTTTG 551 GCGACGGTGT TGGTGGCGAT GCAGCGGTCG
AGTGCCGAGG AAAGTGCTTG 601 TGCAAATGCG TTCATTGCGG GAATACGTTG
GGGGGGGGGA AACTTGCGGA 651 TTTTACCACG ATTCCCGCGT TGTCGGCAGA
CGGCGGCGGT TTGGTGGTAC 701 AATGTGCGCC GTTTGCAGCC TTAAGGTGTT
TCTGTATTTT TGGAGTATGG 751 AAACGCATTC GGGCTGTTTT TTGCGGAAGA
CGGTAA
This corresponds to the amino acid sequence <SEQ ID 2244; ORF
681>:
TABLE-US-02653 g681.pep 1 MTTPMAISAS NFSEEAKFIS AMGISSAPGT
VATVMFSSAT PNSWRVRQQT 51 LSIWLPISLV KRACTMPMRR CLPSRLGAMV
FIGCPLVFGV SECRLKVSVL 101 RLPVGNGLEC AVFGKLPRAA FGLGKQCGGF
RVGFGDVGEA DDAEVVGVVG 151 VFVGFVAAEE TPAAVVFKNG GFAVKEADGP
VLFGDGVGGD AAVECRGKCL 201 CKCVHCGNTL GGGKLADFTT IPALSADGGG
LVVQCAPFAA LRCFCIFGVW 251 KRIRAVFCGR R*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2245>:
TABLE-US-02654 m681.seq 1 ATGACGACGC CGATGGCAAT CAGTGCGTCA
AACTTTTCGG AAGAGGCAAA 51 GTTCATCAGC GCGATGGGGA TTTCAAGCGC
GCCGGGTACG GTGGCGACGG 101 TAATGTTTTC GTCTGCCACG CCCAATTCTT
GGAGGGTGCG GCAGCAGACT 151 TTGAGCATTT CGCTGCCGAT TTCGTTGGTG
AAGCGTGCCT GTACGATGCC 201 GATGCGGAGG TGTTTGCCGT CGAGGTTGGG
GGCGATGGTG TTCATTGGGT 251 GTCCTTTGGT ATTCGGAGTT TCGGAATGCC
GTCTGAAGGT TTCAGTCTTG 301 CGGCTGCCAG TCGGCGACGG TTTGGAATGT
GCCGTCTTCG GCAAGCTCCC 351 ATGCGCTGCC TTCGGGTTGG GAGAGCAGTG
CGGCGGTTTC AGGGTTGGTT 401 TTGGCGATGT CGGCGAGGCT GACGATGCTG
AAGTTGTCCG GATCGTCGGT 451 GTATTCGTCG GTCTCGTCGC CGCTGAAGAA
ACGCCAGCCG CTGTCGTTTT 501 CAAAAACGGG GGCTTCGCGG TAGAGGAAGC
CGACGGGCCG GTTTTGTTTG 551 GCGACGGTGT TGGTGGCGAT ACAGCGGTCG
AGTGCCGAGG AAAGTGCTTG 601 TGCAAATGCG TTCATTACGG GAATACGTTG
GGGG.AAAAC TTACGGATTT 651 TACCACGATT CGTGCGTTGT CGGCAGACGG
CGGCGGTTTG GTGGTACAAT 701 GTGCGCCGTT TGCAGCCTTA AGGTGTTTCT
GTATTTTTGG AGTATGGAAA 751 CGCATTCGGG CTGTTTTTTG CGGAAGACGG TAA
This corresponds to the amino acid sequence <SEQ ID 2246; ORF
681>:
TABLE-US-02655 m681.pep 1 MTTPMAISAS NFSEEAKFIS AMGISSAPGT
VATVMFSSAT PNSWRVRQQT 51 LSISLPISLV KRACTMPMRR CLPSRLGAMV
FIGCPLVFGV SECRLKVSVL 101 RLPVGDGLEC AVFGKLPCAA FGLGEQCGGF
RVGFGDVGEA DDAEVVRIVG 151 VFVGLVAAEE TPAAVVFKNG GFAVEEADGP
VLFGDGVGGD TAVECRGKCL 201 CKCVHYGNTL GXKLTDFTTI RALSADGGGL
VVQCAPFAAL RCFCIFGVWK 251 RIRAVFCGRR *
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 681 shows 94.6% identity over a 261 aa overlap with a
predicted ORF (ORF681.a) from N. gonorrhoeae:
TABLE-US-02656 m681/g681 10 20 30 40 50 60 m681.pep
MTTPMAISASNFSEEAKFISAMGISSAPGTVATVMFSSATPNSWRVRQQTLSISLPISLV
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| g681
MTTPMAISASNFSEEAKFISAMGISSAPGTVATVMFSSATPNSWRVRQQTLSIWLPISLV 10 20
30 40 50 60 70 80 90 100 110 120 m681.pep
KRACTMPMRRCLPSRLGAMVFIGCPLVFGVSECRLKVSVLRLPVGDGLECAVFGKLPCAA
|||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| g681
KRACTMPMRRCLPSRLGAMVFIGCPLVFGVSECRLKVSVLRLPVGNGLECAVFGKLPRAA 70 80
90 100 110 120 130 140 150 160 170 180 m681.pep
FGLGEQCGGFRVGFGDVGEADDAEVVRIVGVFVGLVAAEETPAAVVFKNGGFAVEEADGP
||||:||||||||||||||||||||| :||||||:|||||||||||||||||||:||||| g681
FGLGKQCGGFRVGFGDVGEADDAEVVGVVGVFVGFVAAEETPAAVVFKNGGFAVKEADGP 130
140 150 160 170 180 190 200 210 220 230 239 m681.pep
VLFGDGVGGDTAVECRGKCLCKCVHYGNTLGX-KLTDFTTIRALSADGGGLVVQCAPFAA
||||||||||:|||||||||||||| ||||| ||:||||| |||||||||||||||||| g681
VLFGDGVGGDAAVECRGKCLCKCVHCGNTLGGGKLADFTTIPALSADGGGLVVQCAPFAA 190
200 210 220 230 240 240 250 260 m681.pep LRCFCIFGVWKRIRAVFCGRRX
|||||||||||||||||||||| g681 LRCFCIFGVWKRIRAVFCGRRX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2247>:
TABLE-US-02657 a681.seq 1 ATAACGACGC CGATGGCAAT CAGTGCGTCA
AATTTTTCAG AAGAGGCAAA 51 GTTCATCAGC GCGATGGGGA TTTCAAGCGC
GCCGGGTACG GTGGCGACGG 101 TAATGTTTTC GTCTGCCACG CCCAATTCTT
GGAGGGTGCG GCAGCAGACT 151 TTGAGCATTT CGCTGCCGAT TTCGTTGGTG
AAGCGTGCCT GTACGATGCC 201 GATGCGGAGG TGTTTGCCGT CGAGGTTGGG
GGCGATGGTG TTCATTGAGT 251 GTCCTTTGGT ATTCGGAGGT TTCGGAATGC
CGTCTGAAGG GTCAGTCCTT 301 AGGTTGCCAG TCGGCGACGG TTTGGAATGT
GCCGTCTTCT GCCAATTCCC 351 ACGCGCTGCC TTCAGGTTGG GAGAGCAGTG
CGGCGGTTTC AGGGTTGGTT 401 TTGGTGATAT CGGCGAGGCT GACGATGCTG
AAGTTGTCCG GGTCGTCGGT 451 GTATTCGTCG GTCTCGTCGC CGCTGAAGAA
ACGCCAGCCG CTGTCGTTTT 501 CAAAAACGGG GGCTTCGCGG TAGAGGAAGC
CGACGGGCTG GTTTTGTTTG 551 GCGACGGTGT TGGTGGCGAT GCAGCGGTCG
AGTGCCGAGG AAAGTGCTTG 601 TGCAAATGCG TTCATTGCGG GAATACGTT.
GGGGGAAAAC TTGCGGATTT 651 TACCACGATT CTTGCGTTGT CGGCAGACGG
CGGCGGTTTG GTGGTACAAT 701 GTGCGCCGTT TGCAGCCTTA AGGTGTTTCT
GTATTTTTGG AGTATGGAAA 751 CGCATTCGGG CTGTTTTTTG CGGAAGACGG TAA
This corresponds to the amino acid sequence <SEQ ID 2248; ORF
681.a>:
TABLE-US-02658 a681.pep 1 ITTPMAISAS NFSEEAKFIS AMGISSAPGT
VATVMFSSAT PNSWRVRQQT 51 LSISLPISLV KRACTMPMRR CLPSRLGAMV
FIECPLVFGG FGMPSEGSVL 101 RLPVGDGLEC AVFCQFPRAA FRLGEQCGGF
RVGFGDIGEA DDAEVVRVVG 151 VFVGLVAAEE TPAAVVFKNG GFAVEEADGL
VLFGDGVGGD AAVECRGKCL 201 CKCVHCGNTX GGKLADFTTI LALSADGGGL
VVQCAPFAAL RCFCIFGVWK 251 RIRAVFCGRR * m681/a681 90.8% identity in
260 aa overlap 10 20 30 40 50 60 m681.pep
MTTPMAISASNFSEEAKFISAMGISSAPGTVATVMFSSATPNSWRVRQQTLSISLPISLV
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a681
ITTPMAISASNFSEEAKFISAMGISSAPGTVATVMFSSATPNSWRVRQQTLSISLPISLV 10 20
30 40 50 60 70 80 90 100 110 120 m681.pep
KRACTMPMRRCLPSRLGAMVFIGCPLVFGVSECRLKVSVLRLPVGDGLECAVFGKLPCAA
|||||||||||||||||||||||||||| :|||||||||||||||| ::| || a681
KRACTMPMRRCLPSRLGAMVFIECPLVFGGFGMPSEGSVLRLPVGDGLECAVFCQFPRAA 70 80
90 100 110 120 130 140 150 160 170 180 m681.pep
FGLGEQCGGFRVGFGDVGEADDAEVVRIVGVFVGLVAAEETPAAVVFKNGGFAVEEADGP |
||||||||||||||:||||||||||:||||||||||||||||||||||||||||||| a681
FRLGEQCGGFRVGFGDIGEADDAEVVRVVGVFVGLVAAEETPAAVVFKNGGFAVEEADGL 130
140 150 160 170 180 190 200 210 220 230 240 m681.pep
VLFGDGVGGDTAVECRGKCLCKCVHYGNTLGXKLTDFTTIRALSADGGGLVVQCAPFAAL
||||||||||:|||||||||||||| ||| | ||:||||| ||||||||||||||||||| a681
VLFGDGVGGDAAVECRGKCLCKCVHCGNTXGGKLADFTTILALSADGGGLVVQCAPFAAL 190
200 210 220 230 240 250 260 m681.pep RCFCIFGVWKRIRAVFCGRRX
||||||||||||||||||||| a681 RCFCIFGVWKRIRAVFCGRRX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2249>:
TABLE-US-02659 g682.seq 1 ATGCGCGATT TCGCCGTATG GGTGCCTTAC
GGGGAACGGC GGAAAAATTG 51 GGACATAAGG TATTGCCTCC CGCACCTTAT
TCGCCTGAGC CCAACCCGAT 101 TGAGAAAGTG TGGGCGAATA TTAAGCGGTA
TCTGCGAACC GTTTTGTCTG 151 ATTACGCCCG ATTTGACGAT GCACTACTGT
CCTATTTTGA TTTTAATTGA 201 CTATATTTGT GTGAATGATG AAATAAAAAT
GCCGTCTGAA CCCGATTGGA 251 TTCAGACGGC ATTTTGTATG GCAGGATTTA
TTCGCTTTCC AACTGACCGA 301 CCTATTTTGA CAAGGCAGTC AGGCGTTGTT
CGGATTTCGC CACGAACGGG 351 TTTTCGGTAT CCCACGCGTA GCCTGCCAAA
ATCGAAGAAA GCATACGGCT 401 GA
This corresponds to the amino acid sequence <SEQ ID 2250; ORF
682>:
TABLE-US-02660 g682.pep 1 MRDFAVWVPY GERRKNWDIR YCLPHLIRLS
PTRLRKCGRI LSGICEPFCL 51 ITPDLTMHYC PILILIDYIC VNDEIKMPSE
PDWIQTAFCM AGFIRFPTDR 101 PILTRQSGVV RISPRTGFRY PTRSLPKSKK AYG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2251>:
TABLE-US-02661 m682.seq 1 ATGCGTGATT TCACCGTATG GGTGTCTTAC
GGGAAATGGC GGAAAAATTG 51 GGACATAAGG TATTGCCTCT TGCACCTTAT
TCACCTGAGC TCAACCCGAT 101 TGAGAAAGTG TGGGCGAATA TTAAGCGGTA
TCTGCGAACC GTTTTGTCTG 151 ATTACGCCCG ATTTGACGAT GCACTACTGT
CCTATTTTGA TTTTAATTGA 201 CTAT...... ......GAAA TGGCAATGCC
GTCTGAACCC GATTGGATTC 251 AGACGGCATT TTGTATGGCG TACGGATTTA
TTCGGTTTCC AACTGACCGA 301 CCCATTCGGA CAAGGCAGTC AGGCGTTGTT
CGGATTTCGC CACGAACGGG 351 TTTTCGGTAT CCCACGCGTA GCCTGCCAAA
ATCGAAGAAA GCATACGGCT 401 GA
This corresponds to the amino acid sequence <SEQ ID 2252; ORF
682>:
TABLE-US-02662 m682.pep 1 MRDFTVWVSY GKWRKNWDIR YCLLHLIHLS
STRLRKCGRI LSGICEPFCL 51 ITPDLTMHYC PILILIDY.. ..EMAMPSEP
DWIQTAFCMA YGFIRFPTDR 101 PIRTRQSGVV RISPRTGFRY PTRSLPKSKK AYG*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 682 shows 88.1% identity over a 134 aa overlap with a
predicted ORF (ORF682.a) from N. gonorrhoeae:
TABLE-US-02663 m682/g682 10 20 30 40 50 60 m682.pep
MRDFTVWVSYGKWRKNWDIRYCLLHLIHLSSTRLRKCGRILSGICEPFCLITPDLTMHYC
||||:||| ||: |||||||||| |||:|| ||||||||||||||||||||||||||||| g682
MRDFAVWVPYGERRKNWDIRYCLPHLIRLSPIRLRKCGRILSGICEPFCLITPDLIMHYC 10 20
30 40 50 60 70 80 90 100 110 m682.pep
PILILIDY-----EMAMPSEPDWIQTAFCMAYGFIRFPTDRPIRTRQSGVVRISPRTGFR
|||||||| |: ||||||||||||||| ||||||||||| |||||||||||||||| g682
PILILIDYICVNDEIKMPSEPDWIQTAFCMA-GFIRFPTDRPILTRQSGVVRISPRTGFR 70 80
90 100 110 120 130 m682.pep YPTRSLPKSKKAYGX |||||||||||||||| g682
YPTRSLPKSKKAYGX 120 130
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2253>:
TABLE-US-02664 a682.seq 1 ATGCGCGATT TTACCGTATG GGTGTCTTAC
GGGAAATGGC GGAAAAATTG 51 GGACATAAGG TATTGCCTCT TGCACCTTAT
TCACCTGAGC TCAACCCGAT 101 TGAGAAAGTG TGGGCGAATA TTAAGCGGTA
TCTGCGAACC GTTTTGTCTG 151 ATTACGCCCG ATTTGACGAT GCACTACTGT
CCTATTTTGA TTTTAATTGA 201 ATAT...... .......... ..........
.......... .......... 251 .......... .......... ......TATA
TTCGGTTTCC AACTGACCGA 301 CCCATTCTGA CAAGGCCGAC AGGCGTTGTT
CGGATTTCGC CACGAACGGG 351 TTTTCGGTAT CCCACGCGTA GCCTGCCAAA
ATCGAAGAAA GCATACGGCT 401 GA
This corresponds to the amino acid sequence <SEQ ID 2254; ORF
682.a>:
TABLE-US-02665 a682.pep 1 MRDFTVWVSY GKWRKNWDIR YCLLHLIHLS
STRLRKCGRI LSGICEPFCL 51 ITPDLTMHYC PILILIEY.. ..........
.......... ..YIRFPTDR 101 PILTRPTGVV RISPRTGFRY PTRSLPKSKK AYG*
m682/a682 80.6% identity in 129 aa overlap 10 20 30 40 50 60
m682.pep
MRDFTVWVSYGKWRKNWDIRYCLLHLIHLSSTRLRKCGRILSGICEPFCLITPDLTMHYC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a682
MRDFTVWVSYGKWRKNWDIRYCLLHLIHLSSTRLRKCGRILSGICEPFCLITPDLIMHYC 10 20
30 40 50 60 70 80 90 100 110 120 m682.pep
PILILIDYEMAMPSEPDWIQTAFCMAYGFIRFPTDRPIRTRQSGVVRISPRTGFRYPTRS
||||||:|||||||||||||||||||||:||||||||| || :||||||||||||||||| a682
PILILIEY--------------------YIRFPTDRPILTRPTGVVRISPRTGFRYPTRS 70 80
90 100 130 m682.pep LPKSKKAYGX |||||||||| a682 LPKSKKAYGX 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2255>
TABLE-US-02666 g683.seq 1 ATGATTAAGG AAACCCTAAT GCGCCCAATC
TTCCTATCTT TCGTTTTACT 51 CCCTATTTTG ATAACCGCCT GCAGCACACC
GGACAAGTCT GCCCGATGGG 101 AAAATATCGG CACAATCTCA AACGGCAATA
TTCATACATA TATTAATAAA 151 GACAGTGTGA GAAAAAACGG AAATCTGATG
ATTTTCCAAG ATAAAAAAGT 201 TGTTACCAAT CTGAAACAAG AACGTTTTGC
CAACACCCCC GCATACAAGA 251 CTGCCATTGC CGAGTGGGAA ATCCACTGCA
ACAACAAAAC ATACCGCTTA 301 AGTTCGCTAC AGTTATTTGA TACAAAAAAC
ACGGAAATTT CCACACAAAA 351 CTACACAGCC TCTTCCCTCC GCCCGATGAG
CATCCTGTCC GGGACATTAA 401 CTGAAAAACA ATATGAAACC GTATGCGGGA
AAAAACTCTG A
This corresponds to the amino acid sequence <SEQ ID 2256; ORF
683>:
TABLE-US-02667 g683.pep 1 MIKETLMRPI FLSFVLLPIL ITACSTPDKS
ARWENIGTIS NGNIHTYINK 51 DSVRKNGNLM IFQDKKVVTN LKQERFANTP
AYKTAIAEWE IHCNNKTYRL 101 SSLQLFDTKN TEISTQNYTA SSLRPMSILS
GTLTEKQYET VCGKKL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2257>:
TABLE-US-02668 m683.seq.. 1 ATGATTAAGG AAACCCTAAT GCGCCCAATC
TTCCTATCTT TCGTTTTATT 51 CCCTATTTTG ATAACCGCCT GCAGCACACC
GGACAAGTCT GCCCGATGGG 101 AAAATATCGG CACAATCTCA AACGGCAATA
TTCATACATA TATCAATAAA 151 GACAGCGTGA GAAAAAACGG AAATCTGATG
ATTTTCCAAG ATAAAAAAGT 201 TGTTACCAAT CTAAAACAAG AACGTTTTGC
CAACACCCCC GCATACAAGA 251 CTGCCATTGC CGAGTGGGAA ATCCACTGCA
ACAACAAAAC ATACCGCTTA 301 AGTTCGCTAC AGTTGTTTGA TACAAAAAAC
ACGGAAATTT CCACACAAAA 351 CTACACAGCC TCTTCCCTCC GCCCGATGAG
CATCCTGTCC GGGACATTAA 401 CCGAAAAACA ATATGAAACC GTATGCGGAA
AAAAACTCTG A
This corresponds to the amino acid sequence <SEQ ID 2258; ORF
683>:
TABLE-US-02669 m683.pep.. 1 MIKETLMRPI FLSFVLFPIL ITACSTPDKS
ARWENIGTIS NGNIHTYINK 51 DSVRKNGNLM IFQDKKVVTN LKQERFANTP
AYKTAIAEWE IHCNNKTYRL 101 SSLQLFDTKN TEISTQNYTA SSLRPMSILS
GTLTEKQYET VCGKKL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 683
shows 99.3% identity over a 146 aa overlap with a predicted ORF
(ORF 683) from N. gonorrhoeae:
TABLE-US-02670 m683/g683 99.3% identity in 146 aa overlap 10 20 30
40 50 60 m683.pep
MIKETLMRPIFLSFVLFPILITACSTPDKSARWENIGTISNGNIHTYINKDSVRKNGNLM
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g683
MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNIHTYINKDSVRKNGNLM 10 20
30 40 50 60 70 80 90 100 110 120 m683.pep
IFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSSLQLFDTKNTEISTQNYTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g683
IFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSSLQLFDTKNTEISTQNYTA 70 80
90 100 110 120 130 140 m683.pep SSLRPMSILSGTLTEKQYETVCGKKLX
||||||||||||||||||||||||||| g683 SSLRPMSILSGTLTEKQYETVCGKKLX 130
140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2259>
TABLE-US-02671 a683.seq 1 ATGATTAAGG AAACCCTAAT GCGCCCAATC
TTCCTATCTT TCGTTTTATT 51 CCCTATTTTG ATAACCGCCT GCAGCACACC
GGACAAGTCT GCCCGATGGG 101 AAAATATCGG CACAATCTCA AACGGCAATA
TTCATACATA TATCAATAAA 151 GACAGCGTGA GAAAAAACGG AAATCTGATG
ATTTTCCNAG ATAAAAAAGT 201 TGTTACCAAT CTAAAACAAG AACGTTTTGC
CNACACCCCC GCATACAAGA 251 CTGCCATTGC CGAGTGGGAA ATCCACTGCA
ACAACAAAAC ATACCGCTTA 301 AGTTCGCTAC AATTGTTTGA TACAAAAAAC
ACGGAAATTT CCACACAAAA 351 NTACACAGCC TCTTCCCTCC GCCCGATGAG
CATCCTGTCC GGGACATTAA 401 CCGAAAAACA ATATGAAACC GTATGCGGAA
AAAAACTCTG A
This corresponds to the amino acid sequence <SEQ ID 2260; ORF
683.a>:
TABLE-US-02672 a683.pep 1 MIKETLMRPI FLSFVLFPIL ITACSTPDKS
ARWENIGTIS NGNIHTYINK 51 DSVRKNGNLM IFXDKKVVTN LKQERFAXTP
AYKTAIAEWE IHCNNKTYRL 101 SSLQLFDTKN TEISTQXYTA SSLRPMSILS
GTLTEKQYET VCGKKL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 683
shows 97.9% identity over a 146 aa overlap with a predicted ORF
(ORF 683) from N. meningitidis:
TABLE-US-02673 m683/a683 97.9% identity in 146 aa overlap 10 20 30
40 50 60 m683.pep
MIKETLMRPIFLSFVLFPILITACSTPDKSARWENIGTISNGNIHTYINKDSVRKNGNLM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a683
MIKETLMRPIFLSFVLFPILITACSTPDKSARWENIGTISNGNIHTYINKDSVRKNGNLM 10 20
30 40 50 60 70 80 90 100 110 120 m683.pep
IFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSSLQLFDTKNTEISTQNYTA ||
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| a683
IFXDKKVVTNLKQERFAXTPAYKTAIAEWEIHCNNKTYRLSSLQLFDTKNTEISTQXYTA 70 80
90 100 110 120 130 140 m683.pep SSLRPMSILSGTLTEKQYETVCGKKLX
||||||||||||||||||||||||||| a683 SSLRPMSILSGTLTEKQYETVCGKKLX 130
140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2261>
TABLE-US-02674 g684.seq 1 ATGCGCCTTT TCCCCATCGC CGCCGCCCTG
ACGCTTGCCG CCTGCGGTAC 51 TGTGCAAAGC ACACAATATT TCGTGTTGCC
CGACAGCCGC TACATCCGTC 101 CTGCAACGCA AGGCGGCGAA ACCGCCGTCG
AAGTCCGTCT TGCCGAACCG 151 CTCAAACGCG GCGGACTGGT CTATCAAACC
GACCCCTACC GCATCAACAC 201 CGCACAAAAC CATGTTTGGG CAGACACCTT
GGACGATATG CTCGAAGCGG 251 CGTTGAGCAA TGCATTCAAC CGTTTGGACA
GCACACGCAC CTTTGTTCCT 301 GCCTCACGCA GCGGCAGTAC CGACAAATGG
ACGGTCTATA TCGACGCATT 351 CCAAGGCAGC TACACGGGCA AAACCCTCAT
CAGCGGCTAC GCCGTCCTAC 401 CCGACGGTAC GAACAGACCC TTCCATATCG
AAACCGAACA GCAGGGTGAC 451 GGCTACGCCG CCATGACCGC CGCACTCGAA
CAGGGACTGA AACAGGCGGC 501 GCAACAGATG GTCGAGTAA
This corresponds to the amino acid sequence <SEQ ID 2262; ORF
684>:
TABLE-US-02675 g684.pep 1 MRLFPIAAAL TLAACGTVQS TQYFVLPDSR
YIRPATQGGE TAVEVRLAEP 51 LKRGGLVYQT DPYRINTAQN HVWADTLDDM
LEAALSNAFN RLDSTRTFVP 101 ASRSGSTDKW TVYIDAFQGS YTGKTLISGY
AVLPDGTNRP FHIETEQQGD 151 GYAAMTAALE QGLKQAAQQM VE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2263>:
TABLE-US-02676 m684.seq 1 ATGCGCCTTT TCCCGATTGC CGCCGCCCTG
TCGCTTGCCG CCTGCGGTAC 51 TGTGCAAAGC ACACAATATT TCGTGTTGCC
CGACAGCCGC TACATCCGTC 101 CTGCAACGCA AGGCGGCGAA ACTGCCGTCG
AAGTCCGTCT TGCCGAACCG 151 CTCAAACGCG GCGGACTGGT CTATCAAACC
GACCCCTACC GCCTCAACAC 201 CGCACAAAAC CACGTCTGGG CAGACACCTT
GGACGATATG CTCGAAGCGG 251 CGTTGAGCAA TGCATTCAAC CGTTTGGACA
GCACACGCAT CTTTGTTCCT 301 GCCTCACGCA GCGGCAGTAC CGAAAAATGG
ACGGTCTATA TCGACGCATT 351 CCAAGGCAGC TACACGGGCA AAACCCTCAT
CAGCGGCTAC GCCGTCCTAC 401 CCGACGGTAC GAACAGACCC TTCCATATCG
AAACCGAACA GCAGGGTGAC 451 GGCTACGCCG CGATGACCGC CGCACTCGAA
CAGGGACTGA AACAGGCGGC 501 GCAACAGATG GTCGAGTAA
This corresponds to the amino acid sequence <SEQ ID 2264; ORF
684>:
TABLE-US-02677 m684.pep 1 MRLFPIAAAL SLAACGTVQS TQYFVLPDSR
YIRPATQGGE TAVEVRLAEP 51 LKRGGLVYQT DPYRLNTAQN HVWADTLDDM
LEAALSNAFN RLDSTRIFVP 101 ASRSGSTEKW TVYIDAFQGS YTGKTLISGY
AVLPDGTNRP FHIETEQQGD 151 GYAAMTAALE QGLKQAAQQM VE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 684
shows 97.7% identity over a 172 aa overlap with a predicted ORF
(ORF 684) from N. gonorrhoeae:
TABLE-US-02678 m684/g684 97.7% identity in 172 aa overlap 10 20 30
40 50 60 m684.pep
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g684
MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT 10 20
30 40 50 60 70 80 90 100 110 120 m684.pep
DPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGS
||||:||||||||||||||||||||||||||||||| ||||||||||:|||||||||||| g684
DPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPASRSGSTDKWTVYIDAFQGS 70 80
90 100 110 120 130 140 150 160 170 m684.pep
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVEX
||||||||||||||||||||||||||||||||||||||||||||||||||||| g684
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVEX 130 140 150
160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2265>
TABLE-US-02679 a684.seq 1 ATGCGCCTCT TCCCGATTGC CGCCGCCCTG
ACGCTTGCCG CCTGCGGTAC 51 TGTGCAAAGC ACACAATATT TCGTGTTGCC
CGACAGCCGC TACATCCGTC 101 CTGCAACGCA AGGCGGCGAA ACTGCCGTCG
AAGTCCGTCT TGCCGAACCG 151 CTCAAACGCG GCGGACTGGT CTATCAAACC
GACCCCTACC GCCTCAACAC 201 CGCACAAAAC CACGTCTGGG CAGACACCTT
GGACGATATG CTCGAAGCGG 251 CGTTGAGCAA TGCATTCAAC CGTTTGGACA
GCACACGCAT CTTTGTTCCT 301 GCCTCACGCA GCGGCAGTAC CGAAAAATGG
ACGGTCTATA TCGACGCATT 351 CCAAGGCAGC TACACGGGCA AAACCCTCAT
CAGCGGCTAC GCCGTCCTAC 401 CCGACGGTAC GAACAGACCC TTCCATATCG
AAACCGAACA GCAGGGTGAC 451 GGCTACGCCG CCATGACCGC CGCACTCGAA
CAGGGACTGA AACAGGCGGC 501 GCAACAGATG GTCGAGTAA
This corresponds to the amino acid sequence <SEQ ID 2266; ORF
684.a>:
TABLE-US-02680 a684.pep 1 MRLFPIAAAL TLAACGTVQS TQYFVLPDSR
YIRPATQGGE TAVEVRLAEP 51 LKRGGLVYQT DPYRLNTAQN HVWADTLDDM
LEAALSNAFN RLDSTRIFVP 101 ASRSGSTEKW TVYIDAFQGS YTGKTLISGY
AVLPDGTNRP FHIETEQQGD 151 GYAAMTAALE QGLKQAAQQM VE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 684
shows 99.4% identity over a 172 aa overlap with a predicted ORF
(ORF 684) from N. meningitidis
TABLE-US-02681 m684/a684 99.4% identity in 172 aa overlap 10 20 30
40 50 60 m684.pep
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| a684
MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT 10 20
30 40 50 60 70 80 90 100 110 120 m684.pep
DPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a684
DPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGS 70 80
90 100 110 120 130 140 150 160 170 m684.pep
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVEX
||||||||||||||||||||||||||||||||||||||||||||||||||||| a684
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVEX 130 140 150
160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2267>
TABLE-US-02682 g685.seq 1 TTGTTTTGCC GTATCGGGAA TTTTGCGTTT
TGCGGCGTGG TTTCTGCAGG 51 TTGTTTGCTT AATAATAAAC ATTCTTATTC
GTATGCAAAG GAACCGCACA 101 CCGTGAAACC GCGTTTTTAT TGGGCAGcct
GCGCCGTCCT GCCGGCCGCC 151 TGTTCGCCCG AACCTGCCGC CGAAAAAACT
GTATccgCCG CATCCCAAGC 201 CGCATCCACA CCTGTCGCCA CGCTGACCGT
GCCGACCGCG CGGGGCGATG 251 CCGTTGTGCC GAAGAATCCC GAACgcgtcg
ccgtgtAcga CtggGCGGCG 301 TtggaTACGC TGACCGAGCC GGGCGTGAAT
GTGGGCGCAA CCACCGCGCC 351 GGTGCGCGTG GACTATTTGC AGCCTGCATT
TGACAAGGCG GCAACGGTGG 401 GGACGCTGTT TGAGCCCGAT TGCGAATCCC
TGCACCGCCA CAATCCGCAG 451 TTTGTCATTA CCGGCGGGCC GGGTGCGGAA
GCGTATGAAC AGTTGGCGAA 501 AAACGCGACC ACCATAGATT TGACGGTGGA
CAACGGCAAT ATCCGCACCA 551 GCGGCGAGAA GCAGATGGAG ACCCTGTCGC
GGATTTTCGG TAAGGAAGCG 601 CGCGTGGCGG AATTGAATGC GCAGATTGAC
GCGCTGTTCG CCCAAAAGCG 651 CGAAGCCGCC AAAGGCAAAG GACGCGGGCT
GGTGCTGTCG GTTACAGGCA 701 ACAAGGTGTC CGCCTTCGGC ACGCAATCGC
GGTTGGCAAG TTGGATACAC 751 GGCGACATCG GCCTGCCGCC CGTGGACGAA
TCTTTACGCA ACGAAGGGCA 801 CGGGCAGCCC GTTTCCTTCG AATACATCAA
AGAGAAAAAC CCCGGCTGGA 851 TTTTCATCAT CGACCGCACC GCCGCCATCG
GGCAGGAAGG GCCGGCTGCC 901 GTGGAAGTGT TGGATAACGC GCTGGTATGC
GGCACGAACG CTTGGAAGCG 951 CAAGCAAATC ATCGTCATGC CTGCCGCGAA
CTACATTGTC GCGGGCGGCG 1001 CGCGGCAGTT GATACAGGCG GCGGAACAGT
TGAAGGCGGC GTTTGAAAAG 1051 GCAGAACCCG TTGCGGCGCA GTAG
This corresponds to the amino acid sequence <SEQ ID 2268; ORF
685>:
TABLE-US-02683 g685.pep 1 LFCRIGNFAF CGVVSAGCLL NNKHSYSYAK
EPHTVKPRFY WAACAVLPAA 51 CSPEPAAEKT VSAASQAAST PVATLTVPTA
RGDAVVPKNP ERVAVYDWAA 101 LDTLTEPGVN VGATTAPVRV DYLQPAFDKA
ATVGTLFEPD CESLHRHNPQ 151 FVITGGPGAE AYEQLAKNAT TIDLTVDNGN
IRTSGEKQME TLSRIFGKEA 201 RVAELNAQID ALFAQKREAA KGKGRGLVLS
VTGNKVSAFG TQSRLASWIH 251 GDIGLPPVDE SLRNEGHGQP VSFEYIKEKN
PGWIFIIDRT AAIGQEGPAA 301 VEVLDNALVC GTNAWKRKQI IVMPAANYIV
AGGARQLIQA AEQLKAAFEK 351 AEPVAAQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2269>:
TABLE-US-02684 m685.seq 1 TTGTTTTGCC GTATCGGGAA TTTTGCGTTT
TGCGGCGTGG TTTCTGCAGG 51 TTGTTTGCTT AATAATAAAC ATTCTTATTC
GTATGCAAAG GAACCGCACA 101 CCGTGAAACC GCGTTTTTAT TGGGCAGCCT
GCGCCGTCCT GCTGACCGCC 151 TGTTCGCCCG AACCTGCCGC CGAAAAAACT
GTATCCGCCG CATCCGCATC 201 TGCCGCCACG CTGACCGTGC CGACCGCGCG
GGGCGATGCC GTTGTGCCGA 251 AGAATCCCGA ACGCGTCGCC GTGTACGACT
GGGCGGCGTT GGATACGCTG 301 ACCGAATTGG GCGTGAATGT GGGCGCAACC
ACCGCGCCGG TGCGCGTGGA 351 TTATTTGCAG CCTGCATTTG ACAAGGCGGC
AACGGTGGGG ACGCTGTTCG 401 AGCCCGATTA CGAAGCCCTG CACCGCTACA
ATCCTCAGCT TGTCATTACC 451 GGCGGGCCGG GCGCGGAAGC GTATGAACAG
TTAGCGAAAA ACGCGACCAC 501 CATAGATCTG ACGGTGGACA ACGGCAATAT
CCGCACCAGC GGCGAAAAGC 551 AGATGGAGAC CTTGGCGCGG ATTTTCGGCA
AGGAAGCGCG CGCGGCGGAA 601 TTGAAGGCGC AGATTGACGC GCTGTTCGCC
CAAACGCGCG AAGCCGCCAA 651 AGGCAAAGGA CGCGGGCTGG TGCTGTCGGT
TACGGGCAAC AAGGTGTCCG 701 CCTTCGGCAC GCAGTCGCGG TTGGCAAGTT
GGATACACGG CGACATCGGC 751 CTACCGCCTG TAGACGAATC TTTACGCAAC
GAGGGGCACG GGCAGCCTGT 801 TTCCTTCGAA TACATCAAAG AGAAAAACCC
CGATTGGATT TTCATCATCG 851 ACCGTACCGC CGCCATCGGG CAGGAAGGGC
CGGCGGCTGT CGAAGTATTG 901 GATAACGCGC TGGTACGCGG CACGAACGCT
TGGAAGCGCA AGCAAATCAT 951 CGTCATGCCT GCCGCGAACT ACATTGTCGC
GGGCGGCGCG CGGCAGTTGA 1001 TTCAGGCGGC GGAGCAGTTG AAGGCGGCGT
TTAAAAAGGC AGAACCCGTT 1051 GCGGCGGGGA AAAAGTAG
This corresponds to the amino acid sequence <SEQ ID 2270; ORF
685>:
TABLE-US-02685 m685.pep 1 LFCRIGNFAF CGVVSAGCLL NNKHSYSYAK
EPHTVKPRFY WAACAVLLTA 51 CSPEPAAEKT VSAASASAAT LTVPTARGDA
VVPKNPERVA VYDWAALDTL 101 TELGVNVGAT TAPVRVDYLQ PAFDKAATVG
TLFEPDYEAL HRYNPQLVIT 151 GGPGAEAYEQ LAKNATTIDL TVDNGNIRTS
GEKQMETLAR IFGKEARAAE 201 LKAQIDALFA QTREAAKGKG RGLVLSVTGN
KVSAFGTQSR LASWIHGDIG 251 LPPVDESLRN EGHGQPVSFE YIKEKNPDWI
FIIDRTAAIG QEGPAAVEVL 301 DNALVRGTNA WKRKQIIVMP AANYIVAGGA
RQLIQAAEQL KAAFKKAEPV 351 AAGKK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 685
shows 94.4% identity over a 356 aa overlap with a predicted ORF
(ORF 685) from N. gonorrhoeae:
TABLE-US-02686 m685/g685 94.4% identity in 356 aa overlap 10 20 30
40 50 60 m685.pep
LFCRIGNFAFCGVVSAGCLLNNKHSYSYAKEPHTVKPRFYWAACAVLLTACSPEPAAEKT
||||||||||||||||||||||||||||||||||||||||||||||| :||||||||||| g685
LFCRIGNFAFCGVVSAGCLLNNKHSYSYAKEPHTVKPRFYWAACAVLPAACSPEPAAEKT 10 20
30 40 50 60 70 80 90 100 110 m685.pep
VSAASASA----ATLTVPTARGDAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRV |||||
:| |||||||||||||||||||||||||||||||||| ||||||||||||| g685
VSAASQAASTPVATLTVPTARGDAVVPKNPERVAVYDWAALDTLTEPGVNVGATTAPVRV 70 80
90 100 110 120 120 130 140 150 160 170 m685.pep
DYLQPAFDKAATVGTLFEPDYEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGN
|||||||||||||||||||| |:|||:|||:||||||||||||||||||||||||||||| g685
DYLQPAFDKAATVGTLFEPDCESLHRHNPQFVITGGPGAEAYEQLAKNATTIDLTVDNGN 130
140 150 160 170 180 180 190 200 210 220 230 m685.pep
IRTSGEKQMETLARIFGKEARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFG
||||||||||||:||||||||:|||:||||||||| |||||||||||||||||||||||| g685
IRTSGEKQMELLSRIFGKEARVAELNAQIDALFAQKREAAKGKGRGLVLSVTGNKVSAFG 190
200 210 220 230 240 240 250 260 270 280 290 m685.pep
TQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAA
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| g685
TQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKEKNPGWIFIIDRTAAIGQEGPAA 250
260 270 280 290 300 300 310 320 330 340 350 m685.pep
VEVLDNALVRGTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFKKAEPVAAGKKX
||||||||| ||||||||||||||||||||||||||||||||||||||:||||||| g685
VEVLDNALVCGTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAQX 310 320
330 340 350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2271>
TABLE-US-02687 a685.seq 1 TTGTTTTGCC GTATCGGGAA TTTTGCGTTT
TGCGGCGTGG TTTCTGCAGG 51 TTGTTTGCTT AATAATAAAC ATTCTTATTC
GTATGCAAAG GAACCGCACA 101 CCGTGAAACC GCGTTTTTAT TGGGCAGCCT
GCGCCGTCCT GCTGACCGCC 151 TGTTCGCCCG AACCTGCCGC CGAAAAAACT
GTATCCGCCG CATCCGCATC 201 TGCCGCCACA CTGACCGTGC CGACCGCGCG
GGGCGATGCC GTTGTGCCGA 251 AGAATCCCGA ACGCGTCGCC GTGTACGACT
GGGCGGCGTT GGATACGCTG 301 ACCGAATTGG GTGTGAATGT GGGCGCAACC
ACCGCGCCGG TGCGCGTGGA 351 TTATTTGCAG CCTGCATTTG ACAAGGCGGC
AACGGTGGGG ACGCTGTTCG 401 AGCCCGATTA CGAAGCCCTG CACCGCTACA
ATCCTCAGCT TGTCATTACC 451 GGCGGGCCGG GCGCGGAAGC GTATGAACAG
TTGGCGAAAA ACGCGACCAC 501 CATAGATCTG ACGGTGGACA ACGGCAATAT
CCGCACCAGC GGCGAAAAGC 551 AGATGGAGAC CTTGGCGCGG ATTTTCGGCA
AGGAAGCGCG CGCGGCGGAA 601 TTGAAGGCGC AGATTGACGC GCTGTTCGCC
CAAACGCGCG AAGCCGCCAA 651 AGGCAAAGGA CGCGGGCTGG TGCTGTCGGT
TACGGGCAAC AAGGTGTCCG 701 CCTTCGGCAC GCAGTCGCGG TTGGCAAGTT
GGATACACGG CGACATCGGC 751 CTACCGCCTG TAGACGAATC TTTACGCAAC
GAGGGGCACG GGCAGCCTGT 801 TTCCTTCGAA TACATCAAAG AGAAAAACCC
CGATTGGATT TTCATCATCG 851 ACCGTACCGC CGCCATCGGG CAGGAAGGGC
CGGCGGCTGT CGAAGTATTG 901 GATAACGCGC TGGTACGCGG CACGAACGCT
TGGAAGCGCA AGCAAATCAT 951 CGTCATGCCT GCCGCGAACT ACATTGTCGC
GGGCGGCTCG CGGCAGTTGA 1001 TTCAGGCGGC GGAGCAGTTG AAGGAGGCGT
TTGAAAAGGC AGAACCCGTT 1051 GCGGCGGGGA AAGAGTAG
This corresponds to the amino acid sequence <SEQ ID 2272; ORF
685.a>:
TABLE-US-02688 a685.pep 1 LFCRIGNFAF CGVVSAGCLL NNKHSYSYAK
EPHTVKPRFY WAACAVLLTA 51 CSPEPAAEKT VSAASASAAT LTVPTARGDA
VVPKNPERVA VYDWAALDTL 101 TELGVNVGAT TAPVRVDYLQ PAFDKAATVG
TLFEPDYEAL HRYNPQLVIT 151 GGPGAEAYEQ LAKNATTIDL TVDNGNIRTS
GEKQMETLAR IFGKEARAAE 201 LKAQIDALFA QTREAAKGKG RGLVLSVTGN
KVSAFGTQSR LASWIHGDIG 251 LPPVDESLRN EGHGQPVSFE YIKEKNPDWI
FIIDRTAAIG QEGPAAVEVL 301 DNALVRGTNA WKRKQIIVMP AANYIVAGGS
RQLIQAAEQL KEAFEKAEPV 351 AAGKE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 685
shows 98.9% identity over a 355 aa overlap with a predicted ORF
(ORF 685) from N. meningitidis:
TABLE-US-02689 m685/a685 98.9% identity in 355 aa overlap 10 20 30
40 50 60 m685.pep
LFCRIGNFAFCGVVSAGCLLNNKHSYSYAKEPHTVKPRFYWAACAVLLTACSPEPAAEKT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a685
LFCRIGNFAFCGVVSAGCLLNNKHSYSYAKEPHTVKPRFYWAACAVLLTACSPEPAAEKT 10 20
30 40 50 60 70 80 90 100 110 120 m685.pep
VSAASASAATLTVPTARGDAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a685
VSAASASAATLTVPTARGDAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQ 70 80
90 100 110 120 130 140 150 160 170 180 m685.pep
PAFDKAATVGTLFEPDYEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a685
PAFDKAATVGTLFEPDYEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTS 130
140 150 160 170 180 190 200 210 220 230 240 m685.pep
GEKQMETLARIFGKEARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a685
GEKQMETLARIFGKEARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSR 190
200 210 220 230 240 250 260 270 280 290 300 m685.pep
LASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a685
LASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVL 250
260 270 280 290 300 310 320 330 340 350 m685.pep
DNALVRGTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFKKAEPVAAGKKX
|||||||||||||||||||||||||||||:||||||||||| ||:|||||||||:| a685
DNALVRGTNAWKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKEX 310 320
330 340 350
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2273>
TABLE-US-02690 g686.seq (partial) 1 ..AATTTCTCCT GCCGCGCCGA
TGATGTTTTT GACGATATCT GCAGTGCCGT 51 TGAAGGCTTC ggcgGCATTG
CCCGATCTGT CCAGCTCGGG GCTGTATCGG 101 GTGGCGCGTT TGAATCCGTC
GCCTACTCCT TGCGTCAGCA TAGCGCCGGC 151 ATTGTGGAAA CGGTCGGCAA
GCCGTTGTCC GGTGCTGCGG TTGTCGGTCA 201 GGTTGAGGCG GATATTTTGG
GCAACGCCTT TTATGTCGTA GCTGTATATA 251 TCCCTCGCGC CTTTGGGAGC
GGGATAGCCG CCGCCCTGTG GCCCGTCATA 301 GCCGTCGGCG GGATGGTGTT
CGTATCCGTC CCAATGGATG CGGTAAAGGC 351 TGAATCCGTC AACGGGACTA
CCGGCTTCGT CAGAATCGGA ATGTGA
This corresponds to the amino acid sequence <SEQ ID 2274; ORF
686>:
TABLE-US-02691 g686.pep (partial) 1 ..NFSCRADDVF DDICSAVEGF
GGIARSVQLG AVSGGAFESV AYSLRQHSAG 51 IVETVGKPLS GAAVVGQVEA
DILGNAFYVV AVYIPRAFGS GIAAALWPVI 101 AVGGMVFVSV PMDAVKAESV
NGTTGFVRIG M*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2275>:
TABLE-US-02692 m686.seq.. 1 ATGATGTTGA AAAAATTCGT ACTCGGCGGT
ATTGCCGCAT TGGTTTTGGC 51 GGCCTGCGGC GGTTCGGAAG GCGGCAGCGG
AGCGNNNNNN NNNNNNAATT 101 TCTCCTGCAG CGCCGATGAT GTTTTTAACG
ATATCTGCAG TGCCGTTGAA 151 GGCTTCGGCG GCATTGCCCG ATCTGTCCAG
CTCGGGGCTG TATCGGGTGG 201 CGCGTTTGAA TCCGTCGCCT ACTCCTTGCG
TCAGCATACT ACCGGCATTG 251 TGGAAACGGT CGGCAAGCCG TTGTCCGGTG
CTGCGGTTGT CGGTCAGGTT 301 GAGGCGGATA TTTTGGGCAA CGCCTTTTAT
GTCGTAGCTG TATATATCCC 351 TCGCGCCTTT GGGAGCGGGA TAGCCGCCGC
CCTGTGGCCC GTCATAGCCG 401 TCGGCGGGAT GGTGTTCGTA TCCGTCCCAA
TGGATGCGGT AAAGGCTAAA 451 TCCGTCAACG GGACTACCGG CTTCATCAGA
ATCGGAATGT GA
This corresponds to the amino acid sequence <SEQ ID 2276; ORF
686>:
TABLE-US-02693 m686.pep 1 MMLKKFVLGG IAALVLAACG GSEGGSGAXX
XXNFSCSADD VFNDICSAVE 51 GFGGIARSVQ LGAVSGGAFE SVAYSLRQHT
TGIVETVGKP LSGAAVVGQV 101 EADILGNAFY VVAVYIPRAF GSGIAAALWP
VIAVGGMVFV SVPMDAVKAK 151 SVNGTTGFIR IGM*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 686
shows 95.4% identity over a 131 aa overlap with a predicted ORF
(ORF 686) from N. gonorrhoeae
TABLE-US-02694 g686/m686 95.4% identity in 131 aa overlap 10 20 30
g686.pep NFSCRADDVFDDICSAVEGFGGIARSVQLG ||||
|||||:||||||||||||||||||| m686
LKKFVLGGIAALVLAACGGSEGGSGAXXXXNFSCSADDVFNDICSAVEGFGGIARSVQLG 10 20
30 40 50 60 40 50 60 70 80 90 g686.pep
AVSGGAFESVAYSLRQHSAGIVETVGKPLSGAAVVGQVEADILGNAFYVVAVYIPRAFGS
|||||||||||||||||::||||||||||||||||||||||||||||||||||||||||| m686
AVSGGAFESVAYSLRQHTTGIVETVGKPLSGAAVVGQVEADILGNAFYVVAVYIPRAFGS 70 80
90 100 110 120 100 110 120 130 g686.pep
GIAAALWPVIAVGGMVFVSVPMDAVKAESVNGTTGFVRIGMX
|||||||||||||||||||||||||||:||||||||:||||| m686
GIAAALWPVIAVGGMVFVSVPMDAVKAKSVNGTTGFIRIGMX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2277>
TABLE-US-02695 a686.seq (partial) 1 ..AATTTCTCCT GCCGCGCCGA
TGATGTTTTT GACGATATCT GCAGTGCCGT 51 TGAAAGCTTC GGCGGCATTG
CCCGATCTGT CCAGCTCGGG GCTGTATCGG 101 GTGGCGCGTT TGAATCCGTC
GCCTACTCCT TGCGTCAGCA TACTACCGGT 151 ATTGTGGAAA CGGTCGACAA
GCCGTTGTCC GGTGCTGCGG TTGTCGGTCA 201 GGTTGAGGCG GATATTTTGG
GCAACGCCTT TTATGTCGTA GCTGTATATA 251 TCCCTCGCGC CTTTGGGAGC
GGGATAGCCG CCGCCCTGTG GCCCGTCATA 301 GCCGTCGGCG GGATGGTGTT
CGTATCCGTC CCAATGGATG CGGTAAAGGC 351 TGAATCCGTC AACGGGACTA
CCGGCTTCAT CAGAATCGGA ATGTGA
This corresponds to the amino acid sequence <SEQ ID 2278; ORF
686.a>:
TABLE-US-02696 a686.pep (partial) 1 ..NFSCRADDVF DDICSAVESF
GGIARSVQLG AVSGGAFESV AYSLRQHTTG 51 IVETVDKPLS GAAVVGQVEA
DILGNAFYVV AVYIPRAFGS GIAAALWPVI 101 AVGGMVFVSV PMDAVKAESV
NGTTGFIRIG M*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 686
shows 96.2% identity over a 131 aa overlap with a predicted ORF
(ORF 686) from N meningitidis:
TABLE-US-02697 m686/a686 96.2% identity in 131 aa overlap 10 20 30
40 50 60 m686.pep
LKKFVLGGIAALVLAACGGSEGGSGAXXXXNFSCSADDVFNDICSAVEGFGGIARSVQLG ||||
|||||:|||||||:||||||||||| a686 NFSCRADDVFDDICSAVESFGGIARSVQLG 10 20
30 70 80 90 100 110 120 m686.pep
AVSGGAFESVAYSLRQHTTGIVETVGKPLSGAAVVGQVEADILGNAFYVVAVYIPRAFGS
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| a686
AVSGGAFESVAYSLRQHTTGIVELVDKPLSGAAVVGQVEADILGNAFYVVAVYIPRAFGS 40 50
60 70 80 90 130 140 150 160 m686.pep
GIAAALWPVIAVGGMVFVSVPMDAVKAKSVNGTTGFIRIGMX
|||||||||||||||||||||||||||:|||||||||||||| a686
GIAAALWPVIAVGGMVFVSVPMDAVKAESVNGTTGFIRIGMX 100 110 120 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2279>
TABLE-US-02698 g687.seq 1 ATGAAATCCA GACACCTCGC CCTCGCCCTC
GGCGTTGCCG CCCTGTTCGC 51 CCTTGCCGCG TGCGACAGCA AAGTCCAAAC
CAGCGTCCCC GCCGACAGCG 101 CGCCTGCCGC TTCGGCAGCC GCCGCCCCGG
CAGGACTGGT CGAAGGGCAA 151 AACTACACCG TCCTTGCCAA CCCGATTCCC
CAACAGCAGG CAGGCAAGGT 201 TGAAGTGCTT GAGTTTTTCG GCTATTTTTG
TCCGCACTGC GCCCGCCTcg 251 AACCTGTTTT GAGCAAACAC GCCAAGTCTT
TTAAAGACGA TATGTACCTG 301 CGTACCGAAC ACGTCGTCTG GCAGAAAGAA
ATGCTGCCGC TGGCACGCct 351 cGCCGCCGCC GTCGATATGG CTGCCGCCGA
AAGCAAAGAT GTGGCGAACA 401 GCCATATTTT CGATGCGATG GTCAACCAAA
AAATCAAGCT GCAAGAGCCG 451 GAAGTCCTCA AAAAATGGCT GGGCGAACAa
ACcgcctTTG ACGGCAAAAA 501 AGTCCTTGCC GCCTACGAAT CCCCCGAAAG
TCAGGCGCGC GCcggcAAAA 551 TGCAGGAGCT GACCGAAACC TTCCAAATCG
ACGGTACGCC CACGGTTATC 601 GTCGGCGGCA AATATAAAGT CGAATTTGCC
GACTGGGAGT CCGGTATGAA 651 CACCATCGAC CTTTTGGCGG ACAAAGTACG
TGAAGAACAA AAAGCCGCGC 701 AGTAG
This corresponds to the amino acid sequence <2280 ID 724; ORF
687>:
TABLE-US-02699 g687.pep 1 MKSRHLALAL GVAALFALAA CDSKVQTSVP
ADSAPAASAA AAPAGLVEGQ 51 NYTVLANPIP QQQAGKVEVL EFFGYFCPHC
ARLEPVLSKH AKSFKDDMYL 101 RTEHVVWQKE MLPLARLAAA VDMAAAESKD
VANSHIFDAM VNQKIKLQEP 151 EVLKKWLGEQ TAFDGKKVLA AYESPESQAR
AGKMQELTET FQIDGTPTVI 201 VGGKYKVEFA DWESGMNTID LLADKVREEQ
KAAQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2281>:
TABLE-US-02700 m687.seq 1 ATGAAATCCA GACACCTTGC CCTCgGCGTT
GCCGCCCTGT TCGCCCTTGC 51 CGCGTGCGAC AGCAAAGTCC AAACCAGCGT
CCCCGCCGAC AGCGCGCCTG 101 CCGCTTCGGC AGCCGCCGCC CCGGCAGGGC
TGGTCGAAGG GCAAAACTAT 151 ACCGTCCTTG CCAACCCGAT TCCCCAACAG
CAGGCAGGCA AAGTCGAAGT 201 CCTTGAGTTT TTCGGCTATT TCTGTCCGCA
CTGCGCCCAC CTCGAACCTG 251 TTTTAAGCAA ACACGCCAAG TCTTTTAAAG
ACGATATGTA CCTGCGTACC 301 GAACACGTCG TCTGGCAGAA AGAAATGCTG
ACGCTGGCAC GCCTCGCCGC 351 CGCCGTCGAT ATGGCTGCCG CCGACAGCAA
AGATGTGGCG AACAGCCATA 401 TTTTCGATGC GATGGTCAAC CAAAAAATCA
AGCTGCAAAA TCCGGAAGTC 451 CTCAAAAAAT GGCTGGGCGA ACAAACCGCC
TTTGACGGCA AAAAAGTCCT 501 TGCCGCCTAC GAGTCCCCCG AAAGCCAGGC
GCGCGCCGAC AAAATGCAGG 551 AGCTGACCGA AACCTTCCAA ATCGACGGTA
CGCCCACGGT TATCGTCGGC 601 GGTAAATATA AAGTTGAATT TGCCGACTGG
GAGTCCGGTA TGAACACCAT 651 CGACCTTTTG GCGGACAAAG TACGCGAAGA
ACAAAAAGCC GCGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 2282; ORF
687>:
TABLE-US-02701 m687.pep 1 MKSRHLALGV AALFALAACD SKVQTSVPAD
SAPAASAAAA PAGLVEGQNY 51 TVLANPIPQQ QAGKVEVLEF FGYFCPHCAH
LEPVLSKHAK SFKDDMYLRT 101 EHVVWQKEML TLARLAAAVD MAAADSKDVA
NSHIFDAMVN QKIKLQNPEV 151 LKKWLGEQTA FDGKKVLAAY ESPESQARAD
KMQELTETFQ IDGTPTVIVG 201 GKYKVEFADW ESGMNTIDLL ADKVREEQKA AQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 687
shows 97.0% identity over a 234 aa overlap with a predicted ORF
(ORF 687) from N. gonorrhoeae:
TABLE-US-02702 m687/g687 97.0% identity in 234 aa overlap 10 20 30
40 50 m687.pep
MKSRHLAL--GVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIP
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| g687
MKSRHLALALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIP 10 20
30 40 50 60 60 70 80 90 100 110 m687.pep
QQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAA
|||||||||||||||||||||:|||||||||||||||||||||||||||||| ||||||| g687
QQQAGKVEVLEFFGYFCPHCARLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAA 70 80
90 100 110 120 120 130 140 150 160 170 m687.pep
VDMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQAR
||||||:|||||||||||||||||||||:||||||||||||||||||||||||||||||| g687
VDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTAFDGKKVLAAYESPESQAR 130
140 150 160 170 180 180 190 200 210 220 230 m687.pep
ADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQX |
||||||||||||||||||||||||||||||||||||||||||||||||||||| g687
AGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2283>
TABLE-US-02703 a687.seq 1 ATGAAATCCA AACACCTCGC CCTCGGCGTT
GCCGCCCTGT TCGCACTTGC 51 CGCGTGCGAC AGCAAAGTCC AAACCAGCGT
CCCCGCCGAC AGCGCGCCTG 101 CCGCTTCGGC AGCCGCCGCC CCGGCAGGGC
TGGTCGAAGG GCAAAACTAT 151 ACTGTCCTTG CCAACCCGAT TCCCCAACAG
CAGGCAGGCA AAGTCGAAGT 201 CCTTGAGTTT TTCGGCTATT TCTGTCCGCA
CTGCGCCCAC CTCGAACCTG 251 TTTTAAGCAA ACACGCCAAG TCTTTTAAAG
ACGATATGTA CCTGCGTACC 301 GAACACGTCG TCTGGCAGAA AGAAATGCTG
ACGCTCGCAC GCCTCGCCGC 351 CGCCGTCGAT ATGGCTGCCG CCGACAGCAA
AGATGTGGCG AACAGCCATA 401 TTTTCGATGC GATGGTCAAC CAAAAAATCA
AGCTGCAAGA GCCGGAAGTC 451 CTCAAAAAAT GGCTGGGCGA ACAAACCGCC
TTTGACGGCA AAAAAGTCCT 501 TGCCGCTTAC GAATCTCCCG AAAGCCAGGC
GCGCGCCGAC AAAATGCAGG 551 AGCTGACCGA AACCTTCCAA ATCGACGGTA
CGCCCACGGT TATCGTCGGC 601 GGCAAATATA AAGTCGAATT TGCCGACTGG
GAGTCCGGTA TGAACACCAT 651 CGACCTTTTG GCGGACAAAG TACGCGAAGA
ACAAAAAGCC GCGCACTAA
This corresponds to the amino acid sequence <SEQ ID 2284; ORF
687.a>:
TABLE-US-02704 a687.pep 1 MKSKHLALGV AALFALAACD SKVQTSVPAD
SAPAASAAAA PAGLVEGQNY 51 TVLANPIPQQ QAGKVEVLEF FGYFCPHCAH
LEPVLSKHAK SFKDDMYLRT 101 EHVVWQKEML TLARLAAAVD MAAADSKDVA
NSHIFDAMVN QKIKLQEPEV 151 LKKWLGEQTA FDGKKVLAAY ESPESQARAD
KMQELTETFQ IDGTPTVIVG 201 GKYKVEFADW ESGMNTIDLL ADKVREEQKA AH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 687
shows 98.7% identity over a 232 aa overlap with a predicted ORF
(ORF 687) from N meningitidis:
TABLE-US-02705 m687/a687 98.7% identity in 232 aa overlap 10 20 30
40 50 60 m687.pep
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQ
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a687
MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQ 10 20
30 40 50 60 70 80 90 100 110 120 m687.pep
QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a687
QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVD 70 80
90 100 110 120 130 140 150 160 170 180 m687.pep
MAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARAD
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a687
MAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTAFDGKKVLAAYESPESQARAD 130
140 150 160 170 180 190 200 210 220 230 m687.pep
KMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQX
|||||||||||||||||||||||||||||||||||||||||||||||||||:| a687
KMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAHX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2285>
TABLE-US-02706 g688.seq 1 GTGCTACACT AGACATCCCG ATTTGCACAG
AAAGGTTCTC CCGTGAACAA 51 AACCCTCATC CTCGCCCTTT CCGCCCTGTT
CAGCCTGACC GCGTGCAGCG 101 TCGAACGCGT CTCGCTGTTT CCCTCCTACA
AACTCAAAAT CATCCAAGGC 151 AACGAACTCG AACCGCGCGC CGTTGCCGCC
CTGCGCCCCG GCATGACCAA 201 AGACCAAGTC CTGCTCCTGC TCGGCAGCCC
CATACTGCGC GACGCTTTCC 251 ATACCGACCG CTGGGACTAT ACCTTCAACA
CCTCCCGCAA CGGCATCATC 301 AAAGAACGCA GCAACCTGAC CGTCTATTTT
GAAAACGGCG TACTCGTCCG 351 CACCGAAGGC GACGCCCTCC AAAATGCCGC
CGAAGCCCTC CGCGCGAAAC 401 AAAACGCAGA CAAACAATAA
This corresponds to the amino acid sequence <SEQ ID 2286; ORF
688>:
TABLE-US-02707 g688.pep 1 VLH*TSRFAQ KGSPVNKTLI LALSALFSLT
ACSVERVSLF PSYKLKIIQG 51 NELEPRAVAA LRPGMTKDQV LLLLGSPILR
DAFHTDRWDY TFNTSRNGII 101 KERSNLTVYF ENGVLVRTEG DALQNAAEAL
RAKQNADKQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2287>:
TABLE-US-02708 m688.seq 1 GTGTTACACT ACCCATCCCG ATTTGCACAG
AAAGGCATTT CCGTGAACAA 51 AACCCTCATC CTCGCCCTTT CCGCCCTCCT
CGGCCTTGCC GCGTGCAGTG 101 CCGAACGCGT TTCACTGTTC CCCTCGTACA
AACTCAAAAT CATACAGGGC 151 AACGAACTCG AACCGCGCGC CGTTGCCGCC
CTCCGCCCCG GCATGACCAA 201 AGACCAAGTC CTGCTCCTGC TCGGCAGCCC
CATACTGCGC GACGCATTCC 251 ATACCGACCG CTGGGACTAT ACCTTCAACA
CCTCCCGCAA CGGCATCATC 301 AAAGAACGCA GCAATCTGAC CGTCTATTTT
GAAAACGGCG TACTCGTCCG 351 CACCGAAGGC GACGTCCTGC AAAACGCTGC
CGAAGCCCTC AAAGACCGCC 401 AAAACACAGA CAAACCATAA
This corresponds to the amino acid sequence <SEQ ID 2288; ORF
688>:
TABLE-US-02709 m688.pep 1 VLHYPSRFAQ KGISVNKTLI LALSALLGLA
ACSAERVSLF PSYKLKIIQG 51 NELEPRAVAA LRPGMTKDQV LLLLGSPILR
DAFHTDRWDY TFNTSRNGII 101 KERSNLTVYF ENGVLVRTEG DVLQNAAEAL
KDRQNTDKP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 688
shows 90.6% identity over a 138 aa overlap with a predicted ORF
(ORF 688) from N. gonorrhoeae:
TABLE-US-02710 m688/g688 90.6% identity in 138 aa overlap 10 20 30
40 50 60 m688.pep
VLHYPSRFAQKGISVNKTLILALSALLGLAACSAERVSLFPSYKLKIIQGNELEPRAVAA |||
||||||| ||||||||||||::|:|||:|||||||||||||||||||||||||| g688
VLHXTSRFAQKGSPVNKTLILALSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAVAA 10 20
30 40 50 60 70 80 90 100 110 120 m688.pep
LRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLVRTEG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g688
LRPGMTKDQVLLLLGSPILRDAFHTDRWDYTENTSRNGIIKERSNLTVYFENGVLVRTEG 70 80
90 100 110 120 130 140 m688.pep DVLQNAAEALKDRQNTDKPX |:||||||||:
:||:|| g688 DALQNAAEALRAKQNADKQX 130 140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2289>
TABLE-US-02711 a688.seq 1 GTGTTACACT ACCCATCCCG ATTTGCACAG
AAAGGCATTT CCGTGAACAA 51 AACCCTCATC CTCGCCCTTT CCGCCCTCCT
CGGCCTTGCC GCGTGCAGCG 101 TCGAACGCGT TTCACTGTTC CCCTCGTACA
AACTCAAAAT CATACAGGGC 151 AACGAACTCG AACCTCGCGC CGTCGCCTCC
CTCCGCCCCG GTATGACCAA 201 AGACCAAGTC CTGCTCCTGC TCGGCAGCCC
CATACTGCGC GACGCATTCC 251 ATACCGACCG CTGGGACTAT ACCTTCAACA
CCTCCCGCAA CGGCATCATC 301 AAAGACCGAA GCAATCTGAC CGTCTATTTT
GAAAACGGCG TGCTCGTCCG 351 CACCGAAGGC AACGCCCTGC AAAATGCCGC
CGAAGCCCTC CGCGTAAAAC 401 AAAACGCAGA CAAACAATAA
This corresponds to the amino acid sequence <SEQ ID 2290; ORF
688.a>:
TABLE-US-02712 a688.pep 1 VLHYPSRFAQ KGISVNKTLI LALSALLGLA
ACSVERVSLF PSYKLKIIQG 51 NELEPRAVAS LRPGMTKDQV LLLLGSPILR
DAFHTDRWDY TFNTSRNGII 101 KDRSNLTVYF ENGVLVRTEG NALQNAAEAL
RVKQNADKQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 688
shows 93.5% identity over a 138 aa overlap with a predicted ORF
(ORF 688) from N. meningitidis
TABLE-US-02713 m688/a688 93.5% identity in 138 aa overlap 10 20 30
40 50 60 m688.pep
VLHYPSRFAQKGISVNKTLILALSALLGLAACSAERVSLFPSYKLKIIQGNELEPRAVAA
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||: a688
VLHYPSRFAQKGISVNKTLILALSALLGLAACSVERVSLFPSYKLKIIQGNELEPRAVAS 10 20
30 40 50 60 70 80 90 100 110 120 m688.pep
LRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLVRTEG
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| a688
LRPGMTKDQVLLLLGSPILRDAFHTDRWDYTENTSRNGIIKDRSNLTVYFENGVLVRTEG 70 80
90 100 110 120 130 140 m688.pep DVLQNAAEALKDRQNTDKPX ::||||||||:
:||:|| a688 NALQNAAEALRVKQNADKQX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2291>
TABLE-US-02714 g689.seq (partial) 1 ..TCTCCGCCCC TTCCTCCGAT
GAGCGGAAAA CTGATGGCGG TTTTGATGGC 51 GGTACTGGTC GCGCTGATGC
CGTTTTCCAT CGATGCCTAC CTGCCCGCGA 101 TTCCCGAAAT GGCGCAGCCG
CTGAACGCGG ATATCCACCG TATCGAATAG 151 AGTCTGAGTT TGTTTATGTT
CGGCACGGCG TTCGGGCAAG TGGCCGGCGG 201 CGCGGTGTCC GACATCAAAG
GGCGCAAACC CGTCGCCCTG ACCGGTTTGA 251 TTGTATATTG CCTTGCCGTT
GCCGCCATCG TATTTGCTTC GAGTACCGAA 301 CAGCTCCTTA ACCTGCGTGC
GGTACAGGCG TTCGGCGCAG GCATGGCTGT 351 AGTCATCGTc ggtgcgatgg
tgcgcgatTA TTATTCCGGA CGCAAAGCCG 401 cgcAGATGTT TGCCCTTATC
GGCATCATTC TGATGGTTGT GCCGCTGGCC 451 GCACCCATGG TCGGCGCATT
GTTGCAGGGA TTGGGCGGAT GGCGGGCGAT 501 TTTCGTTTTC ttggcGgcgT
ATTCGCCGGT GCTGCCCGGT TTGGTACAGT 551 ATTTCCTGCC CAATCCCGCC
GTCGGCGGCA AAATCGGCAG GGATGTGTTC 601 GGGCTGGTGG CGGGGCGGTT
CAAGCGCGTA TTGAAAACCC GTGCCGCGAT 651 GGGTtatCTG TTTTTTCAGG
CATTCAGCTT CGGTTCGATG TTCGCCTTTC 701 TGACCGAATC TTCCTTCGTG
TACCGGCAGC TCTACCACGT TACGCCGCAC 751 CGGTACGCAT GGGTGTTTGC
ACTCAACATC ATCACGATGA TGTTTTTCAG 801 CCGCGTTACC GCGTGGCGGC
TTAAAACCGG CGCGCATCCG CAAAGCATCC 851 TGCTGCGGGG GATTGTCGTC
CAATTTGCCG CCAACCCGTC CCAACTCGCC 901 GCCGTGCTGT TTTTCGGGTT
GCCCCCGTTT TGGCTGCCGG TCGCGTGCGT 951 GATGTTTTCC GTCGGTACGC
AGGGCCTGGT CGGTGCGGAC ACGCAGGCAT 1001 GCTTTATGTC TTATTTCAAA
GAAGAGGGCG GCAGCGCGAA CGCCGTGTCG 1051 GGTGTATTCC GGTCCTTAAT
CGGCGCGGGC GTGGTCATGG CGGCAACCGT 1101 GATGGCGGCA ACCATGACCG
CGTCCGCCTC TTGCGGCATT GCGCTTTTGT 1151 GGCTCTGCTC GCACAAGGCG
TGGAAGGAAA ACGAAAAAAA GCGAATACTT
This corresponds to the amino acid sequence <SEQ ID 2292; ORF
689>:
TABLE-US-02715 g689.pep (partial) 1 ..SPPLPPMSGK LMAVLMAVLV
ALMPFSIDAY LPAIPEMAQP LNADIHRIE* 51 SLSLFMFGTA FGQVAGGAVS
DIKGRKPVAL TGLIVYCLAV AAIVFASSTE 101 QLLNLRAVQA FGAGMAVVIV
GAMVRDYYSG RKAAQMFALI GIILMVVPLA 151 APMVGALLQG LGGWRAIFVF
LAAYSPVLPG LVQYFLPNPA VGGKIGRDVF 201 GLVAGRFKRV LKTRAAMGYL
FFQAFSFGSM FAFLTESSFV YRQLYHVTPH 251 RYAWVFALNI ITMMFFSRVT
AWRLKTGAHP QSILLRGIVV QFAANPSQLA 301 AVLFFGLPPF WLPVACVMFS
VGTQGLVGAD TQACFMSYFK EEGGSANAVS 351 GVFRSLIGAG VVMAATVMAA
TMTASASCGI ALLWLCSHKA WKENEKKRIL
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2293>:
TABLE-US-02716 m689.seq 1 TTGTTAATCC ACTATATCGT TCCGGTTCGT
CCGGTTTTGC CGGGGCTTTT 51 GTTGCCGCCT GTTTGTGCCG GTGTGTTAAA
ATTTTCCGTT TCCGCGTATT 101 GTGTTTTCCG CCGCCGGGCG GTTTGTTTGC
GAATCGGACG AGAATTTATG 151 CCTTCTGCCC ATTATCCTGA AATGAGCGAA
AAACTGATGG CGGTTTTGAT 201 GGCGATGCTG GTTACGCTGA TGCCGTTTTC
CATCGATGCC TACCTGCCCG 251 CGATTCCCGA AATGGCGCAA TCGCTGAACG
CGGATGTTCA CCGCATCGAA 301 CAGAGTTTGA GTTTGTTTAT GTTCGGCACG
GCGTTCGGAC AGGTGGTCGG 351 CGGTTCGGTG TCCGACATCA AAGGGCGCAA
ACCCGTCGCC CTGACCGGTT 401 TGATTGTATA TTGCCTTGCC GTTGCCGCCA
TCGTATTTGT TTCGAGTGCC 451 GAACAGCTCC TCAACCTGCG CGTCGTGCAG
GCATTCGGTG CGGGCATGAC 501 TGTGGTCATC GTCGGCGCAA TGGTGCGCGA
TTATTATTCC GGACGCAAAG 551 CCGCCCAGAT GTTTGCCCTT ATCGGCATCA
TTTTGATGGT TGTGCCGCTG 601 GTCGCACCCA TGGTCGGCGC ATTGTTGCAG
GGCTTGGGTG GCTGGCAGGC 651 GATTTTTGTT TTTCTGGCGG CGTATTCGCT
GGTGCTGCTC GGTTTGGTAC 701 AGTATTTCCT GCCCAAGCCC GCCGTCGGCG
GCAAAATCGG ACGGGACGTG 751 TTCGGGCTGG TGGCGGGGCG GTTCAAGCGC
GTATTGAAAA CCCGTGCTGC 801 GATGGGTTAT CTGTTTTTTC AGGCATTCAG
CTTCGGTTCG ATGTTCGCCT 851 TTCTGACCGA ATCTTCCTTC GTGTACCAGC
AGCTCTACCG TGTTACGCCT 901 CATCAATACG CTTGGGCGTT TGCACTCAAC
ATCATCACGA TGATGTTTTT 951 CAACCGCGTT ACCGCGTGGC GGCTCAAAAC
CGGCGTGCAT CCGCAAAGCA 1001 TCCTGCTGTG GGGGATTGTC GTCCAGTTTG
CCGCCAACCT GTCCCAACTC 1051 GCCGCCGTGC TGTTTTTCGG GTTGCCCCCG
TTTTGGCTGC TGGTCGCGTG 1101 CGTGATGTTT TCCGTCGGTA CGCAGGGCTT
GGTCGGTGCA AACACGCAGG 1151 CGTGTTTTAT GTCCTATTTC AAAGAAGAGG
GCGGCAGCGC AAACGCCGTA 1201 TTGGGTGTAT TCCAATCTTT AATCGGCGCG
GGGGTGGGTA TGGCGGCGAC 1251 CTTCTTGCAC GACGGTTCGG CAACCGTGAT
GGCGGCAACG ATGACCGCGT 1301 CCACCTCTTG CGGCATTGCG CTTCTGTGGC
TCTGCTCGCA TCGTGCGTGG 1351 AAAGAAAACG GGCAAAGCGA ATACCTTTAA
This corresponds to the amino acid sequence <SEQ ID 2294; ORF
689>:
TABLE-US-02717 m689.pep 1 LLIHYIVPVR PVLPGLLLPP VCAGVLKFSV
SAYCVFRRRA VCLRIGREFM 51 PSAHYPEMSE KLMAVLMAML VTLMPFSIDA
YLPAIPEMAQ SLNADVHRIE 101 QSLSLFMFGT AFGQVVGGSV SDIKGRKPVA
LTGLIVYCLA VAAIVFVSSA 151 EQLLNLRVVQ AFGAGMTVVI VGAMVRDYYS
GRKAAQMFAL IGIILMVVPL 201 VAPMVGALLQ GLGGWQAIFV FLAAYSLVLL
GLVQYFLPKP AVGGKIGRDV 251 FGLVAGRFKR VLKTRAAMGY LFFQAFSFGS
MFAFLTESSF VYQQLYRVTP 301 HQYAWAFALN IITMMFFNRV TAWRLKTGVH
PQSILLWGIV VQFAANLSQL 351 AAVLFFGLPP FWLLVACVMF SVGTQGLVGA
NTQACFMSYF KEEGGSANAV 401 LGVFQSLIGA GVGMAATFLH DGSATVMAAT
MTASTSCGIA LLWLCSHRAW 451 KENGQSEYL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 689
shows 88.0% identity over a 408 aa overlap with a predicted ORF
(ORF 689) from N. gonorrhoeae:
TABLE-US-02718 m689/a689 88.0% identity in 408 aa overlap 30 40 50
60 70 80 m689.pep
CAGVLKFSVSAYCVFRRRAVCLRIGREFMPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAY | | ||
||||||||:||:||||||||| g689 SPPLPPMSGKLMAVLMAVLVALMPFSIDAY 10 20 30
90 100 110 120 130 140 m689.pep
LPAIPEMAQSLNADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLIVYCLAV
||||||||| ||||:|||| ||||||||||||||:||:|||||||||||||||||||||| g689
LPAIPEMAQPLNADIHRIEXSLSLFMFGTAFGQVAGGAVSDIKGRKPVALTGLIVYCLAV 40 50
60 70 80 90 150 160 170 180 190 200 m689.pep
AAIVFVSSAEQLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLV
|||||:||:|||||||:||||||||:|||||||||||||||||||||||||||||||||: g689
AAIVFASSTEQLLNLRAVQAFGAGMAVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLA 100
110 120 130 140 150 210 220 230 240 250 260 m689.pep
APMVGALLQGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRV
||||||||||||||:|||||||||| || ||||||||:|||||||||||||||||||||| g689
APMVGALLQGLGGWRAIFVFLAAYSPVLPGLVQYFLPNPAVGGKIGRDVFGLVAGRFKRV 160
170 180 190 200 210 270 280 290 300 310 320 m689.pep
LKTRAAMGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVT
|||||||||||||||||||||||||||||||:|||:||||:|||:|||||||||||:||| g689
LKTRAAMGYLFFQAFSFGSMFAFLTESSFVYRQLYHVTPHRYAWVFALNIITMMFFSRVT 220
230 240 250 260 270 330 340 350 360 370 380 m689.pep
AWRLKTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGAN
|||||||:||||||| ||||||||| |||||||||||||||| ||||||||||||||||: g689
AWRLKTGAHPQSILLRGIVVQFAANPSQLAAVLFFGLPPFWLPVACVMFSVGTQGLVGAD 280
290 300 310 320 330 390 400 410 420 430 440 m689.pep
TQACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
||||||||||||||||||| |||:||||||| |||| |||||||||:|||||| g689
TQACFMSYFKEEGGSANAVSGVFRSLIGAGVVMAAT--------VMAATMTASASCGIAL 340
350 360 370 380 450 460 m689.pep LWLCSHRAWKENGQSEYLX ||||||:|||||
::: | g689 LWLCSHKAWKENEKKRIL 390 400
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2295>
TABLE-US-02719 a689.seq 1 TTGTTAATCC ACTATATCGT TCCGGTTCGT
CCGGTTTTGC CGGGGCTTTT 51 GTTGCCGCCT GTTTGTGCCG GTGTGTTAAA
ATTTTCCGTT TCCGCGTATT 101 GTGTTTTCCG CCGCCGGGCG GTTTGTTTGC
GAATCGGACG AGAATTTATG 151 CCTTCTGCCC ATTATCCTGA AATGAGCGAA
AAACTGATGG CGGTTTTGAT 201 GGCGATGCTG GTTACGCTGA TGCCGTTTTC
CATCGATGCC TACCTGCCCG 251 CGATTCCCGA AATGGCGCAG TCGCTGAACG
CGGATGTCCA CCGCATCGAA 301 CAGAGCCTGA GTTTGTTTAT GTTCGGCACG
GCGTTCGGAC AGGTGGTCGG 351 CGGTTCGGTG TCCGACATCA AAGGGCGCAA
ACCCGTCGCG CTGACCGGAC 401 TGGCCGTCTA CTGCCTTGCC GTTGCCGCCA
TCGTATTTGC TTCGAGTGCC 451 GAACAGCTCC TCAACCTGCG CGTCGTGCAG
GCATTCGGTG CGGGCATGAC 501 TGTGGTCATC GTCGGCGCAA TGGTGCGCGA
TTATTATTCC GGACGCAAAG 551 CCGCCCAGAT GTTTGCCCTT ATCGGCATCA
TTTTGATGGT TGTGCCGCTG 601 GTCGCACCCA TGGTCGGCGC ATTGTTGCAG
GGCTTGGGTG GCTGGCAGGC 651 GATTTTTGTT TTTCTGGCGG CGTATTCGCT
GGTGCTGCTC GGTTTGGTAC 701 AGTATTTCCT GCCCAAGCCC GCCGTCGGCG
GCAAAATCGG CAGGGATGTG 751 TTCGGGCTGG TGGCTGGGCG GTTCAAACGC
GTATTGAAAA CCCGTGCCGC 801 GATGGGTTAT CTGTTTTTTC AGGCATTCAG
CTTCGGTTCG ATGTTCGCCT 851 TTCTGACCGA ATCTTCCTTC GTGTACCAGC
AGCTCTACCA CGTTACGCCG 901 CACCAGTACG CTTGGGCGTT TGCACTCAAC
ATCATCACGA TGATGTTTTT 951 CAACCGTATT ACCGCGTGGC GGCTCAAAAC
CGGCGTGCAT CCGCAAAGCA 1001 TCCTGCTGTG GGGGATTGTC GTCCAGTTTG
CCGCCAACCT GTCCCAACTC 1051 GCCGCCGTGC TGTTTTTCGG GTTGCCCCCG
TTTTGGCTGC TGGTCGCGTG 1101 CGTGATGTTT TCCGTCGGTA CGCAGGGCTT
GGTCGGTGCA AACACGCAGG 1151 CGTGTTTTAT GTCCTATTTC AAAGAAGAGG
GCGGCAGCGC AAACGCCGTA 1201 TTGGGTGTAT TCCAATCTTT AATCGGCGCG
GGGGTGGGTA TGGCGGCGAC 1251 CTTCTTGCAC GACGGTTCGG CAACCGTGAT
GGCGGCAACC ATGACCGCGT 1301 CTACCTCTTG CGGCATTGCG CTTTTGTGGC
TCTGCTCGCA TCGTGCGTGG 1351 AAAGAAAACG GGCAAAGCGA ATACCTTTAA
This corresponds to the amino acid sequence <SEQ ID 2296; ORF
689.a>:
TABLE-US-02720 a689.pep 1 LLIHYIVPVR PVLPGLLLPP VCAGVLKFSV
SAYCVFRRRA VCLRIGREFM 51 PSAHYPEMSE KLMAVLMAML VTLMPFSIDA
YLPAIPEMAQ SLNADVHRIE 101 QSLSLFMFGT AFGQVVGGSV SDIKGRKPVA
LTGLAVYCLA VAAIVFASSA 151 EQLLNLRVVQ AFGAGMTVVI VGAMVRDYYS
GRKAAQMFAL IGIILMVVPL 201 VAPMVGALLQ GLGGWQAIFV FLAAYSLVLL
GLVQYFLPKP AVGGKIGRDV 251 FGLVAGRFKR VLKTRAAMGY LFFQAFSFGS
MFAFLTESSF VYQQLYHVTP 301 HQYAWAFALN IITMMFFNRI TAWRLKTGVH
PQSILLWGIV VQFAANLSQL 351 AAVLFFGLPP FWLLVACVMF SVGTQGLVGA
NTQACFMSYF KEEGGSANAV 401 LGVFQSLIGA GVGMAATFLH DGSATVMAAT
MTASTSCGIA LLWLCSHRAW 451 KENGQSEYL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 689
shows 99.1% identity over a 459 aa overlap with a predicted ORF
(ORF 689) from N. meningitidis:
TABLE-US-02721 m689/a689 99.1% identity in 459 aa overlap 10 20 30
40 50 60 m689.pep
LLIHYIVPVRPVLPGLLLPPVCAGVLKFSVSAYCVFRRRAVCLRIGREFMPSAHYPEMSE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a689
LLIHYIVPVRPVLPGLLLPPVCAGVLKFSVSAYCVFRRRAVCLRIGREFMPSAHYPEMSE 10 20
30 40 50 60 70 80 90 100 110 120 m689.pep
KLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLNADVHRIEQSLSLFMFGTAFGQVVGGSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a689
KLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLNADVHRIEQSLSLFMFGTAFGQVVGGSV 70 80
90 100 110 120 130 140 150 160 170 180 m689.pep
SDIKGRKPVALTGLIVYCLAVAAIVFVSSAEQLLNLRVVQAFGAGMTVVIVGAMVRDYYS
|||||||||||||| |||||||||||:||||||||||||||||||||||||||||||||| a689
SDIKGRKPVALTGLAVYCLAVAAIVFASSAEQLLNLRVVQAFGAGMTVVIVGAMVRDYYS 130
140 150 160 170 180 190 200 210 220 230 240 m689.pep
GRKAAQMFALIGIILMVVPLVAPMVGALLQGLGGWQAIFVFLAAYSLVLLGLVQYFLPKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a689
GRKAAQMFALIGIILMVVPLVAPMVGALLQGLGGWQAIFVFLAAYSLVLLGLVQYFLPKP 190
200 210 220 230 240 250 260 270 280 290 300 m689.pep
AVGGKIGRDVFGLVAGRFKRVLKTRAAMGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| a689
AVGGKIGRDVFGLVAGRFKRVLKTRAAMGYLFFQAFSFGSMFAFLTESSFVYQQLYHVTP 250
260 270 280 290 300 310 320 330 340 350 360 m689.pep
HQYAWAFALNIITMMFFNRVTAWRLKTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPP
|||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||| a689
HQYAWAFALNIITMMFFNRITAWRLKTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPP 310
320 330 340 350 360 370 380 390 400 410 420 m689.pep
FWLLVACVMFSVGTQGLVGANTQACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a689
FWLLVACVMFSVGTQGLVGANTQACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLH 370
380 390 400 410 420 430 440 450 460 m689.pep
DGSATVMAATMTASTSCGIALLWLCSHRAWKENGQSEYLX
|||||||||||||||||||||||||||||||||||||||| a689
DGSATVMAATMTASTSCGIALLWLCSHRAWKENGQSEYLX 430 440 450 460
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2297>
TABLE-US-02722 g690.seq (partial) 1 ATGAAAAACA AAACGTCATC
ACTTCCCTTA TGGCTTGCCG CAATCATGCT 51 GGCCGCGCGT TCCCCGAGCA
AAGAAGATAA AACGAAAGAA AACGGCGCAT 101 CCGCCGCTTC GTCTTCCGCG
TCATCGGCTT CTTCCCAAAC CGATTTGCAA 151 CCGGCCGCAT CCGCCCCTGA
TAACGTCAAG CAGGCAGAAA GCGCGCCACT 201 GTGAAATTGC ACCGGCCTGC
ACCCCGCCGC CGGCATTGGC GATCTCATAC 251 AGCAAATCGC CGAACACATC
GACTCGGACT GTCTGTTTGC CCTTTCCCAT 301 AACGAACTGG AAACCCGTTT
CGGCTTACCC GGCGGCGGCT ATGACAACAT 351 ACAGCGGctG CTgtttCCCG
ACATCCGCCC TGAAGATCCC GACTACCATC 401 AGAAAATCAT GCTGGCAATC
GAAGACTTGC GTTACGGAAC GCGCACCATC 451 AGccgGCAGG CACAAGATGC
CATAATGGAA CAGGAACGCC gcctccGaGa 501 agCGACGCTG ATGCTGACAC
AGGGCAGTCA AAAAACCCGC GGaCAAGGCG 551 AGGAACCGAA ACGCGCACGT
TATTTTGAAG TTTCGGCAAC ATCtgCCtaT 601 TTgaaccggC ACAAcaacGG
ACTTggcgGC AATTTCCAAT ACATCGGCCA 651 ATTGCCCGGC TATCTGAAAA
TGCACGGAGA AATGCTTGAA AACCAATCAC 701 TCTTCCGGCT GTCCAACCGT
GAACGCAATC CCGACAAACC GTTTTTAGAC 751 ATCCATTTTG ACGAAAATGG
CAAAATCACG CGTATTGTCG TTTACGAAAA 801 AAATATCTAT...
This corresponds to the amino acid sequence <SEQ ID 2298; ORF
690>:
TABLE-US-02723 g690.pep (partial) 1 MKNKTSSLPL WLAAIMLAAR
SPSKEDKTKE NGASAASSSA SSASSQTDLQ 51 PAASAPDNVK QAESAPL*NC
TGLHPAAGIG DLIQQIAEHI DSDCLFALSH 101 NELETRFGLP GGGYDNIQRL
LFPDIRPEDP DYHQKIMLAI EDLRYGTRTI 151 SRQAQDAIME QERRLREATL
MLTQGSQKTR GQGEEPKRAR YFEVSATSAY 201 LNRHNNGLGG NFQYIGQLPG
YLKMHGEMLE NQSLFRLSNR ERNPDKPFLD 251 IHFDENGKIT RIVVYEKNIY ...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2299>:
TABLE-US-02724 m690.seq.. 1 ATGAAAAACA AAACCTCATC ACTTCTCTTA
TGGCTTACCG CAATCATGCT 51 GACCGCGTGT TCTCCGAGCA AAGACGATAA
AACCAAAGAA GTCGGTGCAT 101 CCGCTGCTTC GTCCTCCGCG TCATCAGCTC
CTTCCCAAAC CGATTTGCAA 151 CCGACCGCAT CCGCCCCTGA TAACGTCAAG
CAGGCAGAAA GCGCGCCGCC 201 GTCAAATTGC ACCAGCCTGC ACCCCGCCAC
CGGCATTGAC GATCTCATGC 251 AGCAAATCGC CGAACACATT GACTCGGACT
GTCTGTTTGC CCTTTCCCAT 301 CACGAACTGG AAACCCGTTT CGGCTTACCC
GACGGTGGCT ATGACAACAT 351 ACAGCGGCTG CTGTTTCCCG ACATCCGCCC
TGAAGATCCC GACTACCATC 401 AGAAAATCAT ACTGGCAATT GAAGACTTGC
GTTACGGAAA GCGCACGATC 451 AGCCGGCAGG CACAAAATGC CTTGATGGAA
CAGGAACGCC GCCTCCGAGA 501 AGCGACGCTG TTGCTGATAC AGGGCAGTCA
AGAAACCCGC GGACAAGGCG 551 AGGAGCCGAA ACGCACGCGT TATTTTGAAG
TTTCGGCAAC CCCTGCCTAT 601 TCGAGCCGGC ACAACAACGG ACTTGGCGGC
AATTTCCAAT ACATCAGCCA 651 ATTGCCCGGC TATCTGAAAA TACACGGAGA
AATGCTTGAA AACCAATCAC 701 TCTTCCGGCT GTCCAACCGT GAACGCAATC
CCGACAAACC GTTTTTAGAC 751 ATCCATTTTG ACGAAAATGG CAAAATCACG
CGTATTGTCG TTTACGAAAA 801 AAACATCTAC TTCAATCCAA ACACGGGGCG
AATATAA
This corresponds to the amino acid sequence <SEQ ID 2300; ORF
690>:
TABLE-US-02725 m690.pep 1 MKNKTSSLLL WLTAIMLTAC SPSKDDKTKE
VGASAASSSA SSAPSQTDLQ 51 PTASAPDNVK QAESAPPSNC TSLHPATGID
DLMQQIAEHI DSDCLFALSH 101 HELETRFGLP DGGYDNIQRL LFPDIRPEDP
DYHQKIILAI EDLRYGKRTI 151 SRQAQNALME QERRLREATL LLIQGSQETR
GQGEEPKRTR YFEVSATPAY 201 SSRHNNGLGG NFQYISQLPG YLKIHGEMLE
NQSLFRLSNR ERNPDKPFLD 251 IHFDENGKIT RIVVYEKNIY FNPNTGRI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 690
shows 89.3% identity over a 408 aa overlap with a predicted ORF
(ORF 690) from N. gonorrhoeae:
TABLE-US-02726 m690/g690 89.3% identity in 408 aa overlap 10 20 30
40 50 60 m690.pep
MKNKTSSLLLWLTAIMLTACSPSKDDKTKEVGASAASSSASSAPSQLDLQPTASAPDNVK
|||||||| |||:||||:| ||||:||||| |||||||||||| |||||||:|||||||| g690
MKNKTSSLPLWLAAIMLAARSPSKEDKTKENGASAASSSASSASSQLDLQPAASAPDNVK 10 20
30 40 50 60 70 80 90 100 110 120 m690.pep
QAESAPPSNCTSLHPATGIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDGGYDNIQRL ||||||
|||:||||:|| ||:|||||||||||||||||:||||||||| ||||||||| g690
QAESAPLXNCTGLHPAAGIGDLIQQIAEHIDSDCLFALSHNELETRFGLPGGGYDNIQRL 70 80
90 100 110 120 130 140 150 160 170 180 m690.pep
LFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQNALMEQERRLREATLLLIQGSQETR
||||||||||||||||:||||||||| ||||||||:|:||||||||||||:| ||||:|| g690
LFPDIRPEDPDYHQKIMLAIEDLRYGTRTISRQAQDAIMEQERRLREATLMLTQGSQKTR 130
140 150 160 170 180 190 200 210 220 230 240 m690.pep
GQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYISQLPGYLKIHGEMLENQSLFRLSNR
||||||||:|||||||| || :|||||||||||||:|||||||:|||||||||||||||| g690
GQGEEPKRARYFEVSATSAYLNRHNNGLGGNFQYIGQLPGYLKMHGEMLENQSLFRLSNR 190
200 210 220 230 240 250 260 270 279 m690.pep
ERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNTGRIX
|||||||||||||||||||||||||||||| g690 ERNPDKPFLDIHFDENGKITRIVVYEKNIY
250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2301>
TABLE-US-02727 a690.seq 1 ATGAAAAACA AAACCTCATC ACTTCTCTTA
TGGCTTGCCG CAATGATGCT 51 GACCGCGTGT TCCCCGAGCA AAGAAGATAA
AACGAAAGAA AACGGCGCAT 101 CCGCCGCCTC GTCCACGGCA TCCGCCGCTT
CGTCTTCCGC GCCCCAAACC 151 GATTTGCAAC CGGCCGCATC CGCCCCTGAT
AACGTCAAGC AGGCAGAAAG 201 CGTGCCGCCG TCAAATTGCA CCGACCTGCA
CCCCGCCACC GGCATTGACG 251 ATCTCATGCA GCAAATCGCC GAACACATTG
ACTCGGACTG TCTGTTTGCC 301 CTTTCCCATC ACGAACTGGA AACCCGTTTC
GGCTTACCCG GCGGCGGCTA 351 TGACAACATA CAGCGGCTGC TGTTTCCCGA
CATCCGCCCT GAAGATCCCG 401 ACTACCATCA GAAAATCATA CTGGCAATTG
AAGACTTGCG TTACGGAAAG 451 CGCACGATCA GCCGGCAGGC ACAAGATGCC
TTGATGGAAC AGGAACGCCG 501 CCTCCGAGAA GCGACGCTGT TGCTGATACA
GGGCAGTCAA GAAACCCGCG 551 GACAAGGCGA GGAGCCGAAA CGCACGCGTT
ATTTTGAAGT TTCGGCAACC 601 CCTGCCTATT CGAGCCGGCA CAACAACGGA
CTTGGCGGCA ATTTCCAATA 651 CATCGGCCAA TTGCCCGGCT ATCTGAAAAT
ACACGGAGAA ATGCTTGAAA 701 ACCAATCACT CTTCCGGCTG TCCAACCGTG
AACGCAATCC CGACAAACCG 751 TTTTTAGACA TCCATTTTGA CGAAAATGGC
AAAATCACGC GTATTGTCGT 801 TTACGAAAAA AACATCTACT TCAATCCAAA
CTTGGGGCGA AGATAA
This corresponds to the amino acid sequence <SEQ ID 2302; ORF
690.a>:
TABLE-US-02728 a690.pep 1 MKNKTSSLLL WLAAMMLTAC SPSKEDKTKE
NGASAASSTA SAASSSAPQT 51 DLQPAASAPD NVKQAESVPP SNCTDLHPAT
GIDDLMQQIA EHIDSDCLFA 101 LSHHELETRF GLPGGGYDNI QRLLFPDIRP
EDPDYHQKII LAIEDLRYGK 151 RTISRQAQDA LMEQERRLRE ATLLLIQGSQ
ETRGQGEEPK RTRYFEVSAT 201 PAYSSRHNNG LGGNFQYIGQ LPGYLKIHGE
MLENQSLFRL SNRERNPDKP 251 FLDIHFDENG KITRIVVYEK NIYFNPNLGR R*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 690
shows 93.9% identity over a 280 aa overlap with a predicted ORF
(ORF 690) from N. meningitidis:
TABLE-US-02729 m690/a690 93.9% identity in 280 aa overlap 10 20 30
40 50 m690.pep
MKNKTSSLLLWLTAIMLTACSPSKDDKTKEVGASAASSSASSAPS---QTDLQPTASAPD
||||||||||||:|:|||||||||:||||| |||||||:||:| | ||||||:||||| a690
MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAASSSAPQTDLQPAASAPD 10 20
30 40 50 60 60 70 80 90 100 110 m690.pep
NVKQAESAPPSNCTSLHPATGIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDGGYDNI
|||||||:||||||:|||||||||||||||||||||||||||||||||||||| |||||| a690
NVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALSHHELETRFGLPGGGYDNI 70 80
90 100 110 120 120 130 140 150 160 170 m690.pep
QRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQNALMEQERRLREATLLLIQGSQ
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| a690
QRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDALMEQERRLREATLLLIQGSQ 130
140 150 160 170 180 180 190 200 210 220 230 m690.pep
ETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYISQLPGYLKIHGEMLENQSLFRL
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| a690
ETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL 190
200 210 220 230 240 240 250 260 270 279 m690.pep
SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNTGRIX
||||||||||||||||||||||||||||||||||||| || a690
SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRRX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2303>
TABLE-US-02730 g691.seq 1 GTGCCGCTGC CTGCTCCCTG CCGTTTTGCC
AAACCTGCCG CCTCTTTTTT 51 AAGTATGGCT TTGCTTTCCT GCCAGCTTTC
CCACGCCGCC ACGGCTTATA 101 TCCCCCCGAA CGATTTTCAA CCGAACTGCG
ACATACGCCG GCTCGGGCTG 151 ACACAGGGTC AGCACAATGA GCTGCGTAAA
ATCCGCGCCG CCTTCAAAAT 201 GGCGGGCGAC AGGGCGCGTT TGAAGGTTAT
GCATTCCGAA CACAGCCGCC 251 GCCGCTCTGT CGTCGAAATC ATTTCTTCGG
ATGTTTTTAA TCGGAACGAG 301 GCGCGCGATT ATGTCGAAAG CCGCTACCAC
TCCAGCATGG ATTTTGCGGT 351 GGACGAATTG GAAATCCAAC ACCGCTTCTT
CCATATTCTC ACACCGCAAC 401 AGCAGCAAAT GTGGCTTTCT TCCTGCCTCA
AATAA
This corresponds to the amino acid sequence <SEQ ID 2304; ORF
691>:
TABLE-US-02731 g691.pep 1 VPLPAPCRFA KPAASFLSMA LLSCQLSHAA
TAYIPPNDFQ PNCDIRRLGL 51 TQGQHNELRK IRAAFKMAGD RARLKVMHSE
HSRRRSVVEI ISSDVFNRNE 101 ARDYVESRYH SSMDFAVDEL EIQHRFFHIL
TPQQQQMWLS SCLK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2305>:
TABLE-US-02732 m691.seq 1 GTGCCACTGC CTGCTCCCTG CCGTTTTGCC
AAACCTGCCG CCTCTTTTTT 51 AAGTATGGCT TTGCTTTCCT GTCAGCTTTC
CCACGCCGCC ACGGCTTATA 101 TCCCCCCGAA CGATTTTCAA CCGAACTGCG
ACATACGCCG ACTCGGGCTG 151 ACCCAAAGTC AGCACAATGA GCTGCGTAAA
ATCCGCACCG CCTTCAAAAT 201 GGCGGGCGAC AGGGCGCGTT TGAAGGTTAT
GCATTCCGAA CACAGCCGCC 251 GCCGGTCTGT CGTCGAAATC ATTTCCTCGG
ATGTTTTTAA TCGGAACGAG 301 GCGCGCGATT ATGTCGAAAG CCGCTATTTG
TCCGGTATGG ATTTTGCGGT 351 GGACGAATTG GAAATCCAAC ACCGGTTCTT
CCATATCCTC ACACCGCAAC 401 AGCAGCAAAT GTGGCTTTCT TCCTGCCTCA
AATAA
This corresponds to the amino acid sequence <SEQ ID 2306; ORF
691>:
TABLE-US-02733 m691.pep 1 VPLPAPCRFA KPAASFLSMA LLSCQLSHAA
TAYIPPNDFQ PNCDIRRLGL 51 TQSQHNELRK IRTAFKMAGD RARLKVMHSE
HSRRRSVVEI ISSDVFNRNE 101 ARDYVESRYL SGMDFAVDEL EIQHRFFHIL
TPQQQQMWLS SCLK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 691
shows 97.2% identity over a 144 aa overlap with a predicted ORF
(ORF 691) from N. gonorrhoeae:
TABLE-US-02734 m691/g691 97.2% identity in 144 aa overlap 10 20 30
40 50 60 m691.pep
VPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCDIRRLGLTQSQHNELRK
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| g691
VPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCDIRRLGLTQGQHNELRK 10 20
30 40 50 60 70 80 90 100 110 120 m691.pep
IRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEARDYVESRYLSGMDFAVDEL
||:|||||||||||||||||||||||||||||||||||||||||||||| |:|||||||| g691
IRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEARDYVESRYHSSMDFAVDEL 70 80
90 100 110 120 130 140 m691.pep EIQHRFFHILTPQQQQMWLSSCLKX
||||||||||||||||||||||||| g691 EIQHRFFHILTPQQQQMWLSSCLKX 130
140
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2307>
TABLE-US-02735 a691.seq 1 GTGCCACTGC NTGCTCCCTG CCGTTTTGCC
AAACCTGCCG CCTCTTTTTT 51 AAGTATGGCT TTGCTTTCCT GCCAGCTTTC
CCACGCCGCC ACGGCTTATA 101 TCCCCCTGAA CGATTTTCAA CCGAACTGCG
ACATACGCCG GCTCGGACTG 151 ACACAGGGTC AGCACAATGA ACTGCGTAAA
ATCCGCGCCG CCTTCAAAAT 201 GGCGGGCGAC AGGGCGCGTT TGAAGGTTAT
GCATTCCGAA CACAGCCGCC 251 GTCGGTCTGT CGTCGAAATC ATTTCCTCGG
ATGTTTTTAA TCGGAACGAG 301 GCGCGCGATT ATGTCGAAAG CCGCTATTTG
TCCGGTATGG ATTTTGCGGT 351 GGACGAATTG GAAATCCAAC ACCGGTTCTT
CCATATCCTC ACACCGCAAC 401 AGCAGCAAAT GTGGCTTTCT TCCTGCCTCA
AATAA
This corresponds to the amino acid sequence <SEQ ID 2308; ORF
691.a>:
TABLE-US-02736 a691.pep 1 VPLXAPCRFA KPAASFLSMA LLSCQLSHAA
TAYIPLNDFQ PNCDIRRLGL 51 TQGQHNELRK IRAAFKMAGD RARLKVMHSE
HSRRRSVVEI ISSDVFNRNE 101 ARDYVESRYL SGMDFAVDEL EIQHRFFHIL
TPQQQQMWLS SCLK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 691
shows 97.2% identity over a 144 aa overlap with a predicted ORF
(ORF 691) from N. meningitidis:
TABLE-US-02737 m691/a691 97.2% identity in 144 aa overlap 10 20 30
40 50 60 m691.pep
VPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCDIRRLGLTQSQHNELRK |||
||||||||||||||||||||||||||||||| ||||||||||||||||:||||||| a691
VPLXAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCDIRRLGLTQGQHNELRK 10 20
30 40 50 60 70 80 90 100 110 120 m691.pep
IRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEARDYVESRYLSGMDFAVDEL
||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a691
IRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEARDYVESRYLSGMDFAVDEL 70 80
90 100 110 120 130 140 m691.pep EIQHRFFHILTPQQQQMWLSSCLKX
||||||||||||||||||||||||| a691 EIQHRFFHILTPQQQQMWLSSCLKX 130
140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2309>
TABLE-US-02738 g692.seq 1 GTATCGCACA CACGCTGTCG CTGTTCGGAA
TCGAtacGCC GGATTTGGCG 51 GAATGGCAGG GAATGGCGGA TTAAAGGACA
AAAATGCCGT CTGAACACGG 101 ATGCGGTTCA GACGGCATCA TTTTATACGA
CTGCCTTATT TGGCTGCGCC 151 TTCATTCCAT GCGGCAGGGT ATTTGTAGCC
CTCGAAGCGT TTGTGCGCGT 201 AGGCTTTGAA CGCGTCGGAG TTATAGGCCT
CGGTTACGTC TTTAAGCCAT 251 TGGCTGTCTT TGTCGGCGGT TTTgacGGCA
GACCAGTTGA CATAGGCAAA 301 GCTCGGCTCT TGGAACAGGG CTTCGGTCAG
CTTCATGCCG CTGCTTATGG 351 CGTAGTTGCC GTTGACGACG GCAAAATCCA
CGTCGGCGCG GCTGCGCGGC 401 AGTTGTGCGG CTTCAAGCTC GACGATTTTG
ATGTTTTTCA GGTTTTCCGC 451 GATGTCGGCT TTGGATGCGG TCAGCGGATT
GATGCCGTCT TTGAGTTTGA 501 TCCAACCCAG TTCGTTCAGC ATCACCAAGG
CGCGTGCGAA GTTGGAcggG 551 TcgtTGGGCG CGGATACGGT GCTGCCGTCT
TTGACTTCTT CCAGCGATTT 601 CAGTTTGCCC GGATACAGTC CCAAAGGCGC
GGTCGGCACT TGGAAGGCTT 651 CGGTGATGTC CAGGTTGTGT TCTTTTTTGA
AATCGTCAAG ATAGGGTTTG 701 TGTTGGAAGA CGTTGATGTC CAACTCGCCC
TCCGCCAATG CCAGATTCGG 751 GCGCACATAG TCggTAAATT cgaccaatTT
gacgGTGTag cCTTTTTTCT 801 CCAGCTCGgc tTGGATTTGT TCTTTGACCA
TATcgccgaa gtcgcccacg 851 gTCGTGCCGA agacgaTTTC TTTTTTCGCc
GcgcCGTTAT CGGCAGAAGG 901 GGCGGCGgca gaggctgcGG GCGCGCTGTC
TTTTtgaccG ccgCAGGCTG 951 CGAGGATGAG CGCGAGtgcg gcggcggaaa
ggGTTTTGAA GAAGGTTTTc 1001 atATTTTCTc ctga
This corresponds to the amino acid sequence <SEQ ID 2310; ORF
692>:
TABLE-US-02739 g692.pep 1 VSHTRCRCSE SIRRIWRNGR EWRIKGQKCR
LNTDAVQTAS FYTTALFGCA 51 FIPCGRVFVA LEAFVRVGFE RVGVIGLGYV
FKPLAVFVGG FDGRPVDIGK 101 ARLLEQGFGQ LHAAAYGVVA VDDGKIHVGA
AARQLCGFKL DDFDVFQVFR 151 DVGFGCGQRI DAVFEFDPTQ FVQHHQGACE
VGRVVGRGYG AAVFDFFQRF 201 QFARIQSQRR GRHLEGFGDV QVVFFFEIVK
IGFVLEDVDV QLALRQCQIR 251 AHIVGKFDQF DGVAFFLQLG LDLFFDHIAE
VAHGRAEDDF FFRRAVIGRR 301 GGGRGCGRAV FLTAAGCEDE RECGGGKGFE
EGFHIFS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2311>:
TABLE-US-02740 m692.seq 1 GTGTTGCACA CGCTTTGTCG CTGTTCGGAA
TCGATACGCC GGATTCGGCG 51 GAATGGCAGG GAATGGCGGA TTAAAGGACA
AAAATGCCGT CTGAACACGG 101 ATACAGTTCA GACGGCATCA TTTTATACGA
CTGCCTTATT TGGCTGCGCC 151 TTCATTCCAT GCGGCAGGGG ATTTGTAGCC
CTCGAAGCGT TTGTGCGCGT 201 AGGCTTTGAA CGCGTCGGAG TTATAGGCCT
CGGTTACGTC TTTAAGCCAT 251 TGGCTGTCTT TGTCGGCGGT TTTGACGGCA
GACCAGTTGA CATAGGCAAA 301 GCTCGGTTCT TGGAACAGGG CTTCGGTCAG
CTTCATGCCG CTGCTTATGG 351 CGTAGTTGCC GTTGACGACG GCAAAATCCA
CGTCGGCGCG GCTACGCGGC 401 AGTTGCGCGG CTTCAAGCTC GACGATTTTG
ATGTTTTTCA GGTTCTCGGC 451 GATGTCCGCT TTGGATGCGG TCAACGGATT
GATGCCGTCT TTGAGTTTGA 501 TCCAACCCAG TTCGTCGAGC ATCACCAAGA
CGCGGGCGAA GTTGGACGGG 551 TCGTTGGGCG CGGATACGGT GCTGCCGTCT
TTGACTTCTT CCAGCGATTT 601 CAGCTTGCCC GGGTACAGTC CCAAAGGCGC
GGTCGGCACT TGGAAGACTT 651 CGGTGATGTC CAGATTGTGT TCTTTTTTGA
AGTCGTCAAG ATAGGGTTTG 701 TGTTGGAAGA CGTTGATGTC CAACTCGCCC
TCAGCCAATG CCAGATTCGG 751 GCGTACATAG TCGGTAAACT CGACCAGTTT
GACGGTGTAG CCTTTTTTCT 801 CCAGCTCGGC TTGGATTTGT TCTTTGACCA
TATCGCCGAA GTCGCCGACG 851 GTCGTGCCGA AGACGATTTC TTTTTTCGCC
GCGCCGTTGT CGGCGGCGGC 901 AGAAGCGGAT GCGGCGGGCG CGCTGTCTTT
TTGACCGCCG CAGGCGGCGA 951 GGATGAGCGC GAGTGCGGCG GCGGAAAGGG
TTTTGAAGAA GGTTTTCATA 1001 TTTTCTCCTG A
This corresponds to the amino acid sequence <SEQ ID 2312; ORF
692>:
TABLE-US-02741 m692.pep 1 VLHTLCRCSE SIRRIRRNGR EWRIKGQKCR
LNTDTVQTAS FYTTALFGCA 51 FIPCGRGFVA LEAFVRVGFE RVGVIGLGYV
FKPLAVFVGG FDGRPVDIGK 101 ARFLEQGFGQ LHAAAYGVVA VDDGKIHVGA
ATRQLRGFKL DDFDVFQVLG 151 DVRFGCGQRI DAVFEFDPTQ FVEHHQDAGE
VGRVVGRGYG AAVFDFFQRF 201 QLARVQSQRR GRHLEDFGDV QIVFFFEVVK
IGFVLEDVDV QLALSQCQIR 251 AYIVGKLDQF DGVAFFLQLG LDLFFDHIAE
VADGRAEDDF FFRRAVVGGG 301 RSGCGGRAVF LTAAGGEDER ECGGGKGFEE
GFHIFS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 692
shows 91.1% identity over a 338 aa overlap with a predicted ORF
(ORF 692) from N. gonorrhoeae:
TABLE-US-02742 m692/g692 91.1% identity in 338 aa overlap 10 20 30
40 50 60 m692.pep
VLHTLCRCSESIRRIRRNGREWRIKGQKCRLNTDTVQTASFYTTALFGCAFIPCGRGFVA | ||
|||||||||| ||||||||||||||||||:||||||||||||||||||||| ||| g692
VSHTRCRCSESIRRIWRNGREWRIKGQKCRLNTDAVQTASFYTTALFGCAFIPCGRVFVA 10 20
30 40 50 60 70 80 90 100 110 120 m692.pep
LEAFVRVGFERVGVIGLGYVFKPLAVFVGGFDGRPVDIGKARFLEQGFGQLHAAAYGVVA
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| g692
LEAFVRVGFERVGVIGLGYVFKPLAVFVGGFDGRPVDIGKARLLEQGFGQLHAAAYGVVA 70 80
90 100 110 120 130 140 150 160 170 180 m692.pep
VDDGKIHVGAATRQLRGFKLDDFDVFQVLGDVRFGCGQRIDAVFEFDPTQFVEHHQDAGE
|||||||||||:||| ||||||||||||: || |||||||||||||||||||:||| | | g692
VDDGKIHVGAAARQLCGFKLDDFDVFQVFRDVGFGCGQRIDAVFEFDPTQFVQHHQGACE 130
140 150 160 170 180 190 200 210 220 230 240 m692.pep
VGRVVGRGYGAAVFDFFQRFQLARVQSQRRGRHLEDFGDVQIVFFFEVVKIGFVLEDVDV
|||||||||||||||||||||:||:|||||||||| |||||:|||||:|||||||||||| g692
VGRVVGRGYGAAVFDFFQRFQFARIQSQRRGRHLEGFGDVQVVFFFEIVKIGFVLEDVDV 190
200 210 220 230 240 250 260 270 280 290 m692.pep
QLALSQCQIRAYIVGKLDQFDGVAFFLQLGLDLFFDHIAEVADGRAEDDFFFRRAVVG-- ||||
||||||:||||:||||||||||||||||||||||||| |||||||||||||:| g692
QLALRQCQIRAHIVGKFDQFDGVAFFLQLGLDLFFDHIAEVAHGRAEDDFFFRRAVIGRR 250
260 270 280 290 300 300 310 320 330 m692.pep
GGRSGCGGRAVFLTAAGGEDERECGGGKGFEEGFHIFSX || ||| |||||||||
||||||||||||||||||||| g692 GGGRGCG-RAVFLTAAGCEDERECGGGKGFEEGFHIFSX
310 320 330
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2313>
TABLE-US-02743 a692.seq 1 GTGTTGCACA CGCTTTGTCG CTGTTCGGAA
TCGATACGCC GGATTCGGCG 51 GAATGGCAGG GAATGGCGGA TTAAAGGACA
AAAATGCCGT CTGAACACGG 101 ATACGGTTCA GACGGCATCA TTTTATACGA
CTGCCTTATT TGGCTGCGCC 151 TTCATTCCAT GCGGCAGGGG ATTTGTAGCC
CTCGAAGCGT TTGTGCGCGT 201 AGGCTTTGAA CGCGTCGGAG TTATAGGCCT
CGGTTACGTC TTTAAGCCAT 251 TGGCTGTCTT TGTCGGCGGT TTTGACGGCA
GACCAGTTGA CATAGGCAAA 301 GCTCGGTTCT TGGAACAGGG CTTCGGTCAG
CTTCATGCCG CTGCTTATGG 351 CGTAGTTGCC GTTGACGACG GCAAAATCCA
CGTCGGCGCG GCTACGCGGC 401 AGTTGCGCGG CTTCAAGCTC GACGATTTTG
ATGTTTTTCA GGTTTTCGGC 451 AATGTCCGCT TTGGATGCGG TCAGCGGATT
GATGCCGTCT TTGAGTTTGA 501 TCCAACCCAG TTCGTCGAGC ATCACCAAGA
CGCGGGCGAA GTTGGACGGG 551 TCGTTGGGCG CGGATACGGT GCTGCCGTCT
TTGACTTCTT CCAGCGATTT 601 CAGCTTGCCC GGGTACAGTC CCAAAGGCGC
GGTCGGCACT TGGAAGACTT 651 CGGTGATGTC CAGATTGTGT TCTTTTTTGA
AGTCGTCAAG ATAGGGTTTG 701 TGTTGGAAGA CGTTGATGTC CAACTCGCCC
TCAGCCAATG CCAGATTCGG 751 GCGCACATAG TCGGTAAACT CGACCAGTTT
GACGGTGTAG CCTTTTTTCT 801 CCAGCTCGGG TTGGATTTGT TCTTTGACCA
TATCGCCGAA GTCGCCGACG 851 GTCGTGCCGA AGACGATTTC TTTTTTCGCC
GCGCCGTTGT CGGCGGCGGC 901 AGAAGCGGAT GCGGCGGGCG CGCTATCTTT
TTGACCGCCG CAGGCGGCGA 951 GGATGAGCGC GAGTGCGGCG GCGGAAAGGG
TTTTGAAGAA GGTTTTCATA 1001 TTTTCTCCTG A
This corresponds to the amino acid sequence <SEQ ID 2314; ORF
692.a>:
TABLE-US-02744 a692.pep 1 VLHTLCRCSE SIRRIRRNGR EWRIKGQKCR
LNTDTVQTAS FYTTALFGCA 51 FIPCGRGFVA LEAFVRVGFE RVGVIGLGYV
FKPLAVFVGG FDGRPVDIGK 101 ARFLEQGFGQ LHAAAYGVVA VDDGKIHVGA
ATRQLRGFKL DDFDVFQVFG 151 NVRFGCGQRI DAVFEFDPTQ FVEHHQDAGE
VGRVVGRGYG AAVFDFFQRF 201 QLARVQSQRR GRHLEDFGDV QIVFFFEVVK
IGFVLEDVDV QLALSQCQIR 251 AHIVGKLDQF DGVAFFLQLG LDLFFDHIAE
VADGRAEDDF FFRRAVVGGG 301 RSGCGGRAIF LTAAGGEDER ECGGGKGFEE
GFHIFS*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 692
shows 98.8% identity over a 336 aa overlap with a predicted ORF
(ORF 692) from N. meningitidis:
TABLE-US-02745 m692/a692 98.8% identity in 336 aa overlap 10 20 30
40 50 60 m692.pep
VLHTLCRCSESIRRIRRNGREWRIKGQKCRLNTDTVQTASFYTTALFGCAFIPCGRGFVA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a692
VLHTLCRCSESIRRIRRNGREWRIKGQKCRLNTDTVQTASFYTTALFGCAFIPCGRGFVA 10 20
30 40 50 60 70 80 90 100 110 120 m692.pep
LEAFVRVGFERVGVIGLGYVFKPLAVFVGGFDGRPVDIGKARFLEQGFGQLHAAAYGVVA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a692
LEAFVRVGFERVGVIGLGYVFKPLAVFVGGFDGRPVDIGKARFLEQGFGQLHAAAYGVVA 70 80
90 100 110 120 130 140 150 160 170 180 m692.pep
VDDGKIHVGAATRQLRGFKLDDFDVFQVLGDVRFGCGQRIDAVFEFDPTQFVEHHQDAGE
||||||||||||||||||||||||||||:|:||||||||||||||||||||||||||||| a692
VDDGKIHVGAATRQLRGFKLDDFDVFQVFGNVRFGCGQRIDAVFEFDPTQFVEHHQDAGE 130
140 150 160 170 180 190 200 210 220 230 240 m692.pep
VGRVVGRGYGAAVFDFFQRFQLARVQSQRRGRHLEDFGDVQIVFFFEVVKIGFVLEDVDV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a692
VGRVVGRGYGAAVFDFFQRFQLARVQSQRRGRHLEDFGDVQIVFFFEVVKIGFVLEDVDV 190
200 210 220 230 240 250 260 270 280 290 300 m692.pep
QLALSQCQIRAYIVGKLDQFDGVAFFLQLGLDLFFDHIAEVADGRAEDDFFFRRAVVGGG
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| a692
QLALSQCQIRAHIVGKLDQFDGVAFFLQLGLDLFFDHIAEVADGRAEDDFFFRRAVVGGG 250
260 270 280 290 300 310 32010 330 m692.pep
RSGCGGRAVFLTAAGGEDERECGGGKGFEEGFHIFSX
||||||||:|||||||||||||||||||||||||||| a692
RSGCGGRAIFLTAAGGEDERECGGGKGFEEGFHIFSX 310 320 330
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2315>:
TABLE-US-02746 g694.seq 1 TCGGCATTTG TGTTGCCCAA ACATCCGATG
CCTGCGTTAA CGCCTGCGTC 51 AACGTTTGCA CAAATCGGGT TTGGTTTCGC
CCTCGCGGCG CAGCTCCTTG 101 GGCAGGACGA ACACGATGCT TTCTTCCGCG
CCCCCCCCTT CGCGCACGGT 151 TTCATGCCCC CATCCGCGTA TGGTTGCCAA
TACTTCCCGC ACCAACACTT 201 CGGGCGCGGA CGCGCCTGCC GTTACGCCGA
CTTTGCTTTT GCCTTCAAAC 251 CACGTGCGTT GCaggTAGGA CGCGTTGTCC
ACCATATACG CATCGATTCC 301 GCGCGATGCC GCCACTTCGC GCAGGCGGTT
GCTGTTGGAC GAATTGGGCG 351 AACCGACCAC AATCACGATG TCGCACTGTT
CCGCCAGCTC TTTGACGGCG 401 GTTTGCCGGT TGGTCGTCGC ATAGCAGATG
TCTTCCTTGT GCGGATTGCG 451 GATATTGGGG AAACGCGCGT TCAGCGCGGC
GATGATGTCT TTGGTTTCAT 501 CGACCGAGAG CGTGGTTTGG CTGACATAGG
CGAGTTTGTC GGGGTTTCTG 551 ACTTCGAGTT TTGCCACATC TCCGACCGTT
TCGACCAAAA GCATTTTGCC 601 CGGTGCAAGC TGCCCCATCG TGCCTTCGAC
CTCGGCGTGC CCCTTATGCC 651 CGATCATGAT GATTTCACAG TCTTGGGCAT
CCAGTCGGGC GACTTCCTTA 701 TGCACTTTCG TCACCAGCGG GCAAGTCGCA
TCAAATACCC GGAAACCGCG 751 CTCCGCCGCT TCCTGCTGCA CCGCCTTCGA
TACGCCGTGT GCCGAATAAA 801 CCAGTGTCGC GCCCGGCGGC ACTTCCGCCA
AGTCTTCGAT AAACACCGCG 851 CCTTTTTCGC GCAGGTTGTC CACGACGAAT
TTGTTGTGGA CGACTTCGTG 901 GCGCACATAA ACCGGCGCGC CGAATTCTTC
CAAAGCACGT TCGACAATAC 951 TGATTGCCCG ATCCACACCG GCGCAGAAGC
CGCGCGGATT GGCAAGGATG 1001 ATGGTTTTTC CGTTCATAAG TTTTGCATTC
CGTGTTCAGA CGGCATTCAC 1051 GTTTTTTTGC TNNATCTTTG CGATGGACGA
TATTGTCAAG CACCGCCAAC 1101 ACCGCACCGA CGCAGATAA
This corresponds to the amino acid sequence <SEQ ID 2316; ORF
694>:
TABLE-US-02747 g694.pep (partial) 1 SAFVLPKHPM PALTPASTFA
QIGFGFALAA QLLGQDEHDA FFRAPPFAHG 51 FMPPSAYGCQ YFPHQHFGRG
RACRYADFAF AFKPRALQVG RVVHHIRIDS 101 ARCRHFAQAV AVGRIGRTDH
NHDVALFRQL FDGGLPVGRR IADVFLVRIA 151 DIGETRVQRG DDVFGFIDRE
RGLADIGEFV GVSDFEFCHI SDRFDQKHFA 201 RCKLPHRAFD LGVPLMPDHD
DFTVLGIQSG DFLMHFRHQR ASRIKYPETA 251 LRRFLLHRLR YAVCRINQCR
ARRHFRQVFD KHRAFFAQVV HDEFVVDDFV 301 AHINRRAEFF QSTFDNTDCP
IHTGAEAARI GKDDGFSVHK FCIPCSDGIH 351 VFLLXLCDGR YCQAPPTPHR RR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2317>:
TABLE-US-02748 m694.seq 1 TTGGTTTCCG CATCCGGCAC ACGGCAAAAA
TGCCGTCTGA AGCCTGTTCA 51 GACGGCATTT GTGTTGCCCA AACATTCAAC
GCCTGCGTCA ACGTTTGCAC 101 AAATCGGGTT TGGTTTCGCC CTCGCGGCGC
AACTCTTTGG GCAGGACGAA 151 CACAATGCTT TCTTCCGCAC CCTCGCCTTC
GCGTACGGTT TCGTGCCCCC 201 ATCCGCGTAT GGTTGCCAGT ACTTCCCGCA
CCAACACTTC GGGCGCGGAC 251 GCGCCTGCCG TTACGCCGAC TTTGTTTTTG
CCCTCAAACC ATGCGCGTTG 301 CAGGTAGCCT GCATTATCCA CCATATACGC
ATCGATTCCG CGCGATGCCG 351 CCACTTCGCG CAAGCGGTTG CTGTTGGACG
AATTGGGCGA ACCGACCACA 401 ATCACGATGT CGCACTGTTC TGCCAACTCT
TTGACGGCGG TTTGCCGGTT 451 GGTCGTCGCA TAGCAGATAT CTTCCTTGTG
CGGATTGCGG ATATTGGGGA 501 AACGCGCGTT CAGCGCGGCG ATGATGTCTT
TGGTTTCATC GACCGAGAGC 551 GTGGTTTGGC TGACATAGGC GAGTTTGTCG
GGGTTTCTGA CTTCGAGTTT 601 TGCCACATCT CCGACCGTTT CGACCAAAAG
CATTTTGCCC GGCGCAAGCT 651 GCCCCATCGT TCCTTCGACC TCGACGTGCC
CCTTATGCCC GATCATGATG 701 ATTTCACAGT CTTGGGCATC CAGTCGGGCG
ACTTCCTTAT GCACTTTCGT 751 CACCAGCGGG CAAGTCGCAT CAAACACGCG
GAAACCGCgC TCCGCCGCTT 801 CTTGCCGCAC CGCCTTCGAT ACGCCGTGTG
CCGAATAAAC CAGTGTCGCG 851 CCCGGCGGCA CTTCCGCCAA GTCTTCAATA
AACACCGCAC CTTTTTCACG 901 CAGGTTGTCC ACGACGAATT TGTTGTGAAC
GACTTCGTGG CGCACATAAA 951 TCGGCGCGCC GAACTCTTCC AAAGCACGTT
CGACAATACT GATT GCCCGA 1001 TCCACACCAG CGCAGAAGCC GCGCGGATTG
GCAAGGATGA TGGTTTTCTC 1051 GTTCATAAGC CCGGTATTTC GTTTTCAGAC
GGCATCAATA TTTTTCTTCT 1101 TGGGTTTTAC GGTGGACGAT GTTGTCCAAC
ACCGCCAACA CCGCACCGAC 1151 GCAGATAA
This corresponds to the amino acid sequence <SEQ ID 2318; ORF
694>:
TABLE-US-02749 m694.pep 1 LVSASGTRQK CRLKPVQTAF VLPKHSTPAS
TFAQIGFGFA LAAQLFGQDE 51 HNAFFRTLAF AYGFVPPSAY GCQYFPHQHF
GRGRACRYAD FVFALKPCAL 101 QVACIIHHIR IDSARCRHFA QAVAVGRIGR
TDHNHDVALF CQLFDGGLPV 151 GRRIADIFLV RIADIGETRV QRGDDVFGFI
DRERGLADIG EFVGVSDFEF 201 CHISDRFDQK HFARRKLPHR SFDLDVPLMP
DHDDFTVLGI QSGDFLMHFR 251 HQRASRIKHA ETALRRFLPH RLRYAVCRIN
QCRARRHFRQ VFNKHRTFFT 301 QVVHDEFVVN DFVAHINRRA ELFQSTFDNT
DCPIHTSAEA ARIGKDDGFL 351 VHKPGISFSD GINIFLLGFY GGRCCPTPPT
PHRRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 694
shows 86.8% identity over a 372 aa overlap with a predicted ORF
(ORF 694) from N. gonorrhoeae:
TABLE-US-02750 m694/g694 86.8% identity in 372 aa overlap 10 20 30
40 50 m694.pep
LVSASGTRQKCRLKPVQTAFVLPKHS----TPASTFAQIGFGFALAAQLFGQDEHNAFFR
:||||||| |||||||||||||||||||:|||||:|||| g694
SAFVLPKHPMPALTPASTFAQIGFGFALAAQLLGQDEHDAFFR 10 20 30 40 60 70 80 90
100 110 m694.pep
TLAFAYGFVPPSAYGCQYFPHQHFGRGRACRYADFVFALKPCALQVACIIHHIRIDSARC :
||:||:||||||||||||||||||||||||||:||:|| ||||: ::|||||||||| g694
APPFAHGFMPPSAYGCQYFPHQHFGRGRACRYADFAFAFKPRALQVGRVVHHIRIDSARC 50 60
70 80 90 100 120 130 140 150 160 170 m694.pep
RHFAQAVAVGRIGRTDHNHDVALFCQLFDGGLPVGRRIADIFLVRIADIGETRVQRGDDV
|||||||||||||||||||||||| |||||||||||||||:||||||||||||||||||| g694
RHFAQAVAVGRIGRTDHNHDVALFRQLFDGGLPVGRRIADVFLVRIADIGETRVQRGDDV 110
120 130 140 150 160 180 190 200 210 220 230 m694.pep
FGFIDRERGLADIGEFVGVSDFEFCHISDRFDQKHFARRKLPHRSFDLDVPLMPDHDDFT
|||||||||||||||||||||||||||||||||||||| |||||:||| ||||||||||| g694
FGFIDRERGLADIGEFVGVSDFEFCHISDRFDQKHFARCKLPHRAFDLGVPLMPDHDDFT 170
180 190 200 210 220 240 250 260 270 280 290 m694.pep
VLGIQSGDFLMHFRHQRASRIKHAETALRRFLPHRLRYAVCRINQCRARRHFRQVFNKHR
||||||||||||||||||||||: |||||||| |||||||||||||||||||||||:||| g694
VLGIQSGDFLMHFRHQRASRIKYPETALRRFLLHRLRYAVCRINQCRARRHFRQVFDKHR 230
240 250 260 270 280 300 310 320 330 340 350 m694.pep
TFFTQVVHDEFVVNDFVAHINRRAELFQSTFDNTDCPIHTSAEAARIGKDDGFLVHKPGI
:||:|||||||||:|||||||||||:||||||||||||||:||||||||||| ||| | g694
AFFAQVVHDEFVVDDFVAHINRRAEFFQSTFDNTDCPIHTGAEAARIGKDDGFSVHKFCI 290
300 310 320 330 340 360 370 380 m694.pep
SFSDGINIFLLGFYGGRCCPTPPTPHRRRX ||||::|| : || | :||||||||| g694
PCSDGIHVFLXXLCDGRYCQAPPTPHRRRX 350 360 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2319>:
TABLE-US-02751 a694.seq 1 TTGGTTTCCG CATCCGGCAC ACGGCAAAAA
TGCCGTCTGA AGCCTGTTCA 51 GACGGCATTT GTGTTGCCCA AACATTCAAC
GCCTGCGTCA ACGTTTGCAC 101 AAATCGGGTT TGGTTTCGCC CTCGCGGCGC
AACTCTTTGG GCAGGACGAA 151 CACAATGCTT TCTTCCGCAC CCTCGCCTTC
GCGTACGGTT TCGTGCCCCC 201 ATCCGCGTAT GGTTGCCAGT ACTTCCCGCA
CCAACACTTC GGGCGCGGAC 251 GCGCCTGCCG TTACGCCGAC TTTGTTTTTG
CCCTCAAACC ATGCGCGTTG 301 CAGGTAGCCT GCATTATCCA CCATATACGC
ATCGATTCCG CGCGATGCCG 351 CCACTTCGCG CAAGCGGTTG CTGTTGGACG
AATTGGGCGA ACCGACCACA 401 ATCACGATGT CGCACTGTTC TGCCAACTCT
TTGACGGCGG TTTGCCGGTT 451 GGTCGTCGCA TAGCAGATAT CTTCCTTGTG
CGGATTGCGG ATATTGGGGA 501 AACGCGCGTT CAGCGCGGCG ATGATGTCTT
TGGTTTCATC GACCGAGAGC 551 GTGGTTTGGC TGACATAGGC GAGTTTGTCG
GGGTTTCTGA CTTCGAGTTT 601 TGCCACATCT CCGACCGTTT CGACCAAAAG
CATTTTGCCC GGCGCAAGCT 651 GCCCCATCGT TCCTTCGACC TCGACGTGCC
CCTTATGCCC GATCATGATG 701 ATTTCACAGT CTTGGGCATC CAGTCGGGCG
ACTTCCTTAT GCACTTTCGT 751 CACCAGCGGG CAAGTCGCAT CAAACACGCG
GAAACCGCGC TCCGCCGCTT 801 CTTGCCGCAC CGCCTTCGAT ACGCCGTGTG
CCGAATAAAC CAGTGTCGCG 851 CCCGGCGGCA CTTCCGCCAA GTCTTCAATA
AACACCGCAC CTTTTTCACG 901 CAGGTTGTCC ACGACGAATT TGTTGTGAAC
GACTTCGTGG CGCACATAAA 951 TCGGCGCGCC GAACTCTTCC AAAGCACGTT
CGACAATACT GATTGCCCGA 1001 TCCACACCAG CGCAGAAGCC GCGCGGATTG
GCAAGGATGA TGGTTTTCTC 1051 GTTCATAAGC CCGGTATTTC GTTTTCAGAC
GGCATCAATA TTTTTCTTCT 1101 TGGGTTTTAC GGTGGACGAT GTTGTCCAAC
ACCGCCAACA CCGCACCGAC 1151 GCAGATAA
This corresponds to the amino acid sequence <SEQ ID 2320; ORF
694.a>:
TABLE-US-02752 a694.pep 1 LVSASGTRQK CRLKPVQTAF VLPKHSTPAS
TFAQIGFGFA LAAQLFGQDE 51 HNAFFRTLAF AYGFVPPSAY GCQYFPHQHF
GRGRACRYAD FVFALKPCAL 101 QVACIIHHIR IDSARCRHFA QAVAVGRIGR
TDHNHDVALF CQLFDGGLPV 151 GRRIADIFLV RIADIGETRV QRGDDVFGFI
DRERGLADIG EFVGVSDFEF 201 CHISDRFDQK HFARRKLPHR SFDLDVPLMP
DHDDFTVLGI QSGDFLMHFR 251 HQRASRIKHA ETALRRFLPH RLRYAVCRIN
QCRARRHFRQ VFNKHRTFFT 301 QVVHDEFVVN DFVAHINRRA ELFQSTFDNT
DCPIHTSAEA ARIGKDDGFL 351 VHKPGISFSD GINIFLLGFY GGRCCPTPPT
PHRRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 694
shows 100% identity over a 385 aa overlap with a predicted ORF (ORF
694) from N. meningitidis:
TABLE-US-02753 m694/a694 100.0% identity in 385 aa overlap 10 20 30
40 50 60 m694.pep
LVSASGTRQKCRLKPVQTAFVLPKHSTPASTFAQIGFGFALAAQLFGQDEHNAFFRTLAF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
LVSASGTRQKCRLKPVQTAFVLPKHSTPASTFAQIGFGFALAAQLFGQDEHNAFFRTLAF 10 20
30 40 50 60 70 80 90 100 110 120 m694.pep
AYGFVPPSAYGCQYFPHQHFGRGRACRYADFVFALKPCALQVACIIHHIRIDSARCRHFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
AYGFVPPSAYGCQYFPHQHFGRGRACRYADFVFALKPCALQVACIIHHIRIDSARCRHFA 70 80
90 100 110 120 130 140 150 160 170 180 m694.pep
QAVAVGRIGRTDHNHDVALFCQLFDGGLPVGRRIADIFLVRIADIGETRVQRGDDVFGFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
QAVAVGRIGRTDHNHDVALFCQLFDGGLPVGRRIADIFLVRIADIGETRVQRGDDVFGFI 130
140 150 160 170 180 190 200 210 220 230 240 m694.pep
DRERGLADIGEFVGVSDFEFCHISDRFDQKHFARRKLPHRSFDLDVPLMPDHDDFTVLGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
DRERGLADIGEFVGVSDFEFCHISDRFDQKHFARRKLPHRSFDLDVPLMPDHDDFTVLGI 190
200 210 220 230 240 250 260 270 280 290 300 m694.pep
QSGDFLMHFRHQRASRIKHAETALRRFLPHRLRYAVCRINQCRARRHFRQVFNKHRTFFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
QSGDFLMHFRHQRASRIKHAETALRRFLPHRLRYAVCRINQCRARRHFRQVFNKHRTFFT 250
260 270 280 290 300 310 320 330 340 350 360 m694.pep
VHDEFVVNDFVAHINRRAELFQSTFDNTDCPIHTSAEAARIGKDDGFLVHKPGISFSD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a694
QVVHDEFVVNDFVAHINRRAELFQSTFDNTDCPIHTSAEAARIGKDDGFLVHKPGISFSD 310
320 330 340 350 360 370 380 m694.pep GINIFLLGFYGGRCCPTPPTPHRRRX
|||||||||||||||||||||||||| a694 GINIFLLGFYGGRCCPTPPTPHRRRX 370
380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2321>:
TABLE-US-02754 g695.seq 1 TTGCCTCAAA CTCGTCCGGC AAGGCGGCAT
CATCGCCATC GACAATATTT 51 TGTTGAACGG AAGGGTGATG CGCGAAGCGG
CTTTTGATGC GCCGCCCAGT 101 GTCAAAATTC TCAAAGATTT CAATCAAAAC
CTGCCGAACG ATACGCGGAT 151 TGTCCCCATC ACCCTGCCCG TCGGCGACGG
TTTGACCCTG CTTCTGAAAA 201 AATAATGAAG ACCAAATTAC CGCTTTTTAT
CATTTGGCTG TCTGTGTCTG 251 CCTCCTGTGC TTCCGTTTTA CCCGTTCCGG
AGGGCAGCCG AACCGAAATG 301 CCGACACAGG AAAATGCTTC AGACGGCATT
CCCTATCCCG TTCCCACTCT 351 GCAAGACCGT TTGGACTATC TGGAAGGCAA
AATCGTCCGG CTGTCGAACG 401 AAGTGGAAAT GTTAAACGGG AAAGTCAAAG
CATTGGAGCA TACGAAAATA 451 CACCCTTCCG GCAGGACATA CGTCCAAAAA
CTCGACGACC GCAAATTGAA 501 AGAGCATTAC CTCAATACCG AAGGCGGCAG
CGCATCCGCA CATACCGTCG 551 AAACCGCACA AAACCTCTAC AATCAGGCAC
TCAAACACTA TCAAAACGGC 601 AGGTTTTCTG CCGCAGCCGC CTTGTTGAAG
GGGGCGGACG GCGGAGACGG 651 CGGCAGCATC GCGCAACGCA GTATGTACCT
GTTGCTGCAA AGCAGGGCGC 701 GTATGGGGAA CTGTGAATCT GTCATCGAAA
TCGGAGGGCG TTACGCCAAC 751 CGTTTCAAAG ACAGCCCAAC CGCGCCCGAA
GTCATATTCA AAATCGGCGA 801 ATGCCAATAC AGGCTTCAGC AAAAAGACAT
TGCAAGGGCG ACTTGGCGCA 851 GCCTGATACA GACCTATCCC GGCAGCCCGG
CGGCAAAACG CGCCGCCGCA 901 GCCGTACGCA AACGATAG
This corresponds to the amino acid sequence <SEQ ID 2322; ORF
695>:
TABLE-US-02755 g695.pep 1 LPQTRPARRH HRHRQYFVER KGDARSGF*C
AAQCQNSQRF QSKPAERYAD 51 CPHHPARRRR FDPASEKIMK TKLPLFIIWL
SVSASCASVL PVPEGSRTEM 101 PTQENASDGI PYPVPTLQDR LDYLEGKIVR
LSNEVEMLNG KVKALEHTKI 151 HPSGRTYVQK LDDRKLKEHY LNTEGGSASA
HTVETAQNLY NQALKHYQNG 201 RFSAAAALLK GADGGDGGSI AQRSMYLLLQ
SRARMGNCES VIEIGGRYAN 251 RFKDSPTAPE VIFKIGECQY RLQQKDIARA
TWRSLIQTYP GSPAAKRAAA 301 AVRKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2323>:
TABLE-US-02756 m695.seq 1 TTGCCTCAAA CTCGTCCGTC AAGGCGGCAT
CATCGCCATC GACAATATTT 51 TGCTGAACGG AAGGGTGATG CGCGAAGCGG
CTTCCGATGC GCCGCCCAGC 101 GTCGGCATCC TCAAAGATTT CAATCAAAAC
CTGCCGAACG ACCCGCGCAT 151 CGTCCCCATC ACCCTGCCCG TCGGCGACGG
CTTGACCCTG CTTCTGAAAA 201 AATAATGAAG ATCAAATTAC CGCTTTTTAT
CATTTGGCTG TCTGTGTCCG 251 CCTCCTGTGC TTCCGTTTCA CCCGTTCCGG
CAGGCAGCCA AACCGAAATG 301 TCGACACGGG AAAATGCTTC AGACGGCATT
CCCTATCCCG TTCCGACCTT 351 GCAAGACCGT TTGGACTATC TGGAAGGCAA
AATCGTCCGG CTGTCGAACG 401 AAGTGGAAAC CTTAAACGGC AAAGTCAAAG
CACTGGAACA CGCAAAAACA 451 CATTCTTCCG GCAGGGCATA CGTCCAAAAA
CTCGACGACC GCAAGTTGAA 501 AGAGCATTAC CTCAATACCG AAGGCGGCAG
CGCATCCGCA CATACTGTCG 551 AAACCGCACA AAACCTCTAC AATCAGGCAC
TCAAACACTA TAAAAGCGGC 601 AAGTTTTCTG CCGCTGCCTC CCTGTTGAAA
GGCGCGGACG GAGGCGACGG 651 CGGCAGCATC GCGCAACGCA GTATGTACCT
GTTGCTGCAA AGCAGGGCGC 701 GTATGGGCAA CTGCGAATCC GTCATCGAAA
TCGGAGGGCG TTACGCCAAC 751 CGTTTCAAAG ACAGCCCAAC CGCGCCTGAA
GCCATGTTCA AAATCGGCGA 801 ATGCCAATAC AGGCTTCAGC AAAAAGACAT
TGCAAGGGCG ACTTGGCGCA 851 GCCTGATACA GACCTATCCC GGCAGCCCGG
CGGCAAAACG CGCCGCCGCA 901 GCCGTGCGCA AACGATAG
This corresponds to the amino acid sequence <SEQ ID 2324; ORF
695>:
TABLE-US-02757 m695.pep 1 LPQTRPSRRH HRHRQYFAER KGDARSGFRC
AAQRRHPQRF QSKPAERPAH 51 RPHHPARRRR LDPASEKIMK IKLPLFIIWL
SVSASCASVS PVPAGSQTEM 101 STRENASDGI PYPVPTLQDR LDYLEGKIVR
LSNEVETLNG KVKALEHAKT 151 HSSGRAYVQK LDDRKLKEHY LNTEGGSASA
HTVETAQNLY NQALKHYKSG 201 KFSAAASLLK GADGGDGGSI AQRSMYLLLQ
SRARMGNCES VIEIGGRYAN 251 RFKDSPTAPE AMFKIGECQY RLQQKDIARA
TWRSLIQTYP GSPAAKRAAA 301 AVRKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 694
shows 90.8% identity over a 305 aa overlap with a predicted ORF
(ORF 695) from N. gonorrhoeae:
TABLE-US-02758 m695/g695 90.8% identity in 305 aa overlap 10 20 30
40 50 60 m695.pep
LPQTRPSRRHHRHRQYFAERKGDARSGERCAAQRRHPQRFQSKPAERPAHRPHHPARRRR
||||||:||||||||||:|||||||||| |||| :: |||||||||| | ||||||||| g695
LPQTRPARRHHRHRQYFVERKGDARSGFXCAAQCQNSQRFQSKPAERYADCPHHPARRRR 10 20
30 40 50 60 70 80 90 100 110 120 m695.pep
LDPASEKIMKIKLPLFIIWLSVSASCASVSPVPAGSQTEMSTRENASDGIPYPVPTLQDR
:||||||||| |||||||||||||||||| ||| ||:||| |:||||||||||||||||| g695
FDPASEKIMKTKLPLFIIWLSVSASCASVLPVPEGSRTEMPTQENASDGIPYPVPTLQDR 70 80
90 100 110 120 130 140 150 160 170 180 m695.pep
LDYLEGKIVRLSNEVELLNGKVKALEHAKTHSSGRAYVQKLDDRKLKEHYLNTEGGSASA
|||||||||||||||| ||||||||||:| | |||:|||||||||||||||||||||||| g695
LDYLEGKIVRLSNEVEMLNGKVKALEHTKIHPSGRTYVQKLDDRKLKEHYLNTEGGSASA 130
140 150 160 170 180 190 200 210 220 230 240 m695.pep
HTVETAQNLYNQALKHYKSGKFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGNCES
|||||||||||||||||::|:|||||:||||||||||||||||||||||||||||||||| g695
HTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGDGGSIAQRSMYLLLQSRARMGNCES 190
200 210 220 230 240 250 260 270 280 290 300 m695.pep
VIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAA
||||||||||||||||||||::|||||||||||||||||||||||||||||||||||||| g695
VIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAA 250
260 270 280 290 300 m695.pep AVRKRX |||||| g695 AVRKRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2325>:
TABLE-US-02759 a695.seq 1 TTGCCTCAAG CTTGTCCGGC AAGGCGGCAT
CATTGCCATC GACAATATTT 51 TGTTGAACGG AAGGGTGATG CGCGAAGCGG
CTTCCGATGC GCCGCCCAGC 101 GTCGGCATCC TCAAAGATTT TAATCAAAAC
CTGCCGAACG ATACGCGGAT 151 TGTCCCCATC ACCCTGCCCG TCGGCGACGG
TTTGACCCTG CTTCTGAAAA 201 AATAATGAAG ACCAAATTAC CGCTTTTTAT
CATTTGGCTG TCCGTATCCG 251 CCGCCTGTTC TTCCCCTGTT TCCCGCAATA
TTCAGGATAT GCGGCTCGAA 301 CCGCAGGCAG AGGCAGGTAG TTCGGACGCT
ATTCCCTATC CCGTTCCCAC 351 TCTGCAAGAC CGTTTGGATT ATCTGGAAGG
CACACTCGTC CGCCTGTCGA 401 ACGAAGTGGA AACCTTAAAC GGCAAAGTCA
AAGCACTGGA GCATGCGAAA 451 ACACACCCTT CCAGCAGGGC ATACGTCCAA
AAACTCGACG ACCGCAAGTT 501 GAAAGAGCAT TACCTCAATA CCGAAGGCGG
CAGCGCATCC GCACATACCG 551 TCGAAACCGC ACAAAACCTC TACAATCAGG
CACTCAAACA CTATAAAAGC 601 GGCAGGTTTT CTGCCGCTGC CTCCCTGTTG
AAAGGCGCGG ACGGAGGCGA 651 CGGCGGCAGC ATCGCGCAAC GCAGTATGTA
CCTGTTGCTG CAAAGCAGGG 701 CGCGTATGGG CAACTGCGAA TCCGTCATCG
AAATCGGAGG GCGTTACGCC 751 AACCGTTTCA AAGACAGCCC AACCGCGCCT
GAAGCCATGT TCAAAATCGG 801 CGAATGCCAA TACAGGCTTC AGCAAAAAGA
CATTGCAAGG GCGACTTGGC 851 GCAGCCTGAT ACAGACCTAT CCCGGCAGCC
CGGCGGCAAA ACGCGCCGCC 901 GCAGCCGTGC GCAAACGATA G
This corresponds to the amino acid sequence <SEQ ID 2326; ORF
695.a>:
TABLE-US-02760 a695.pep 1 LPQACPARRH HCHRQYFVER KGDARSGFRC
AAQRRHPQRF *SKPAERYAD 51 CPHHPARRRR FDPASEKIMK TKLPLFIIWL
SVSAACSSPV SRNIQDMRLE 101 PQAEAGSSDA IPYPVPTLQD RLDYLEGTLV
RLSNEVETLN GKVKALEHAK 151 THPSSRAYVQ KLDDRKLKEH YLNTEGGSAS
AHTVETAQNL YNQALKHYKS 201 GRFSAAASLL KGADGGDGGS IAQRSMYLLL
QSRARMGNCE SVIEIGGRYA 251 NRFKDSPTAP EAMFKIGECQ YRLQQKDIAR
ATWRSLIQTY PGSPAAKRAA 301 AAVRKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 695
shows 88.3% identity over a 308 aa overlap with a predicted ORF
(ORF 695) from N. meningitidis:
TABLE-US-02761 m695/a695 88.3% identity in 308 aa overlap 10 20 30
40 50 60 m695.pep
LPQTRPSRRHHRHRQYFAERKGDARSGFRCAAQRRHPQRFQSKPAERPAHRPHHPARRRR |||:
|:|||| |||||:|||||||||||||||||||||| |||||| | ||||||||| a695
LPQACPARRHHCHRQYFVERKGDARSGFRCAAQRRHPQRFXSKPAERYADCPHHPARRRR 10 20
30 40 50 60 70 80 90 100 110 m695.pep
LDPASEKIMKIKLPLFIIWLSVSASCASVSPVPAGSQT---EMSTRENASDGIPYPVPTL
:||||||||| |||||||||||||:|:| || : | | ::: ::||:|||||||| a695
FDPASEKIMKTKLPLFIIWLSVSAACSS--PVSRNIQDMRLEPQAEAGSSDAIPYPVPTL 70 80
90 100 110 120 130 140 150 160 170 m695.pep
QDRLDYLEGKIVRLSNEVELLNGKVKALEHAKTHSSGRAYVQKLDDRKLKEHYLNTEGGS
||||||||| :||||||||||||||||||||||| |:||||||||||||||||||||||| a695
QDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEHYLNTEGGS 120
130 140 150 160 170 180 190 200 210 220 230 m695.pep
ASAHTVETAQNLYNQALKHYKSGKFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGN
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| a695
ASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGN 180
190 200 210 220 230 240 250 260 270 280 290 m695.pep
CESVIEIGGRYANRFKDSPLAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a695
CESVIEIGGRYANRFKDSPLAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKR 240
250 260 270 280 290 300 m695.pep AAAAVRKRX ||||||||| a695 AAAAVRKRX
300
The following partial DNA sequence was identified in N. gonorrhoeae
g696.seq: not found This corresponds to the amino acid sequence
<ORF 696.ng>: g696.pep: not found The following partial DNA
sequence was identified in N. meningitidis <SEQ ID 2327>:
TABLE-US-02762 m696.seq 1 TTGGGTTGCC GGCAGGCGGC ATCCCATCAT
TTTTGCCAAG GCAACAAATT 51 ATTTGGCGGC ATCTTTCATT TTGTCTGCCG
CTTCCTGAGT CGCGTCGGCA 101 GCTTTGTTCA AAGTATCTTT AGCTGCTTCA
GTTACAGCTT CTTTGGCTTC 151 AGTTACAGCT TCCTCGGCAC TTGCCTTTGC
ATCAGCCGCA GCATCTTTGA 201 CTTGGTCTTT CGCTTCTTCG ACGGCAGAAG
CGGCAGACTC GGCGGCAGAA 251 GCCGCAGTGT CTTTAACATC GGACTCAACG
GCTTGAACCG CTTCCTTAAC 301 CTCCTGTTTG GCTTCTTGCG AACAAGCTGC
CAAGGCAGCC GCCATCATTG 351 CGGCAATCAA TAA
This corresponds to the amino acid sequence <SEQ ID 2328; ORF
696>:
TABLE-US-02763 m696.pep 1 LGCRQAASHH FCQGNKLFGG IFHFVCRFLS
RVGSFVQSIF SCFSYSFFGF 51 SYSFLGTCLC ISRSIFDLVF RFFDGRSGRL
GGRSRSVFNI GLNGLNRFLN 101 LLFGFLRTSC QGSRHHCGNQ *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2329>:
TABLE-US-02764 a696.seq 1 TTGGGTTGCC GGCAGGCGGC ATCCCATCAT
TTTTGCCAAG GCAACAAATT 51 ATTTGGCGGC ATCTTTCATT TTGTCTGCCG
CTTCCTGAGT CGCGTCGGCA 101 GCTTTGTTCA AAGTATCTTT AGCTGCTTCA
GTTACAGCTT CTTTGGCTTC 151 AGTTACAGCT TCCTCGGCAC TTGCCTTTGC
ATCAGCCGCA GCATCTTTGA 201 CTTGGTCTTT CGCTTCTTCG ACGGCAGAAG
CGGCAGACTC GGCGGCAGAA 251 GCCGCAGTGT CTTTAACATC GGACTCAACG
GCTTGAACCG CTTCCTTAAC 301 CTCCTGTTTG GCTTCTTGCG AACAAGCTGC
CAAGGCAGCC GCCATCATTG 351 CGGCAATCAA TAA
This corresponds to the amino acid sequence <SEQ ID 2330. ORF
696.a>:
TABLE-US-02765 a696.pep 1 LGCRQAASHH FCQGNKLFGG IFHFVCRFLS
RVGSFVQSIF SCFSYSFFGF 51 SYSFLGTCLC ISRSIFDLVF RFFDGRSGRL
GGRSRSVFNI GLNGLNRFLN 101 LLFGFLRTSC QGSRHHCGNQ *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 696
shows 100.0% identity over a 120 aa overlap with a predicted ORF
(ORF 696) from N. meningitidis:
TABLE-US-02766 m696/a696 100.0% identity in 120 aa overlap 10 20 30
40 50 60 m696.pep
LGCRQAASHHFCQGNKLFGGIFHFVCRFLSRVGSFVQSIFSCFSYSFFGFSYSFLGTCLC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a696
LGCRQAASHHFCQGNKLFGGIFHFVCRFLSRVGSFVQSIFSCFSYSFFGFSYSFLGTCLC 10 20
30 40 50 60 70 80 90 100 110 120 m696.pep
ISRSIFDLVFRFFDGRSGRLGGRSRSVFNIGLNGLNRFLNLLFGFLRTSCQGSRHHCGNQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a696
ISRSIFDLVFRFFDGRSGRLGGRSRSVFNIGLNGLNRFLNLLFGFLRTSCQGSRHHCGNQ 70 80
90 100 110 120 m696.pep X | a696 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2331>:
TABLE-US-02767 g700.seq 1 ATGAGCAGCC TGATGACGTT GTTTTCGGTA
TTGGTACCGA TGTTTGCCGG 51 ATTTTTTATC CGTGTTCCCA AGCCTTACCT
GCCCGCTTCG GACAAGGTGC 101 TGTCGGTTTT GGTGTATGCC GTGCTGCTGC
TGATCGGCGT ATCGTTGTCG 151 CGCGTGGAGG ATTTGGGTTC GCGGTTGGGC
GATATGGCGT TGACGGTTCT 201 GTGGCTGTTT GTTTGTACGG TAGGGGCGAA
CCTGCTTGCC TTGGCAGTGT 251 TGGGAAAGTT GTCCCCGTGG CGGATAGGGG
GAAAAGGGAA GGGCGTTTCG 301 GTCGGCGTGT CGGGCAGTGT GAGGCAGCTC
GGATGCGTAC TGCTCGGTTT 351 TGTGTCCGGC AAATTGATGT GCGATATTTG
GATGCCGTCT GAAAACGCGG 401 GTATGTACTG CCTGATGCTG CTGGTGTTCC
TCATCGGCGT ACAGCTCAAA 451 AGTAGCGGCG TATCGTTGCG GCAGGTTTTG
CTTAACCGGC GGGGCATCCG 501 GCTGTCGGTT TGGTTTATAT TGTCATCTCT
TTCAGGCGGG CTGCTGTTTG 551 CCGCATCGGC AGATGGTGTG TCGTGGACGA
AAGGTTTGGC GATGGCTTCC 601 GGCTTCGGTT GGTATTCCCT CTCGGGTTTG
GTAATGACCG AGGCTTACGG 651 GGCGGTATGG GGCAGCATCA TGCTGCTGAA
CGATTTGGCA CGAGAGCTGT 701 TTGCACTGGC ATTTATTCCG CTGCTGATGA
AGCGTTTTCC GGATGCGGCG 751 GTGGGGGTCG GCGGCGCGAC CAGTATGGAT
TTCACATTGC CCGTAATTCA 801 GGGTGCGGGC GGTTTGGAAG TCGTGCCGGT
AGCGGTCAGC TTCGGCGTGG 851 TGGTCAATAT CGCCGCCCCG TTTCTGATGG
TGGTGTTTTC CACGCTGGGC 901 TGA
This corresponds to the amino acid sequence <SEQ ID 2332; ORF
700>:
TABLE-US-02768 g700.pep 1 MSSLMTLFSV LVPMFAGFFI RVPKPYLPAS
DKVLSVLVYA VLLLIGVSLS 51 RVEDLGSRLG DMALTVLWLF VCTVGANLLA
LAVLGKLSPW RIGGKGKGVS 101 VGVSGSVRQL GCVLLGFVSG KLMCDIWMPS
ENAGMYCLML LVFLIGVQLK 151 SSGVSLRQVL LNRRGIRLSV WFILSSLSGG
LLFAASADGV SWTKGLAMAS 201 GFGWYSLSGL VMTEAYGAVW GSIMLLNDLA
RELFALAFIP LLMKRFPDAA 251 VGVGGATSMD FTLPVIQGAG GLEVVPVAVS
FGVVVNIAAP FLMVVFSTLG 301 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2333>:
TABLE-US-02769 m700.seq 1 ATGGACAGCC TGATGACGTT GCTTTCGGTA
TTGATACCGA TGTTTGCCGG 51 ATTTTTTATC CGTGTGCCCA AGCCTTACCT
GCCCGCTTTG GATAAGGTGC 101 TATCGGTCTT GGTGTATGCT GTGCTGCTGC
TGATCGGCGT CTCGTTGTCG 151 CGCGTGGAGG ATTTGGGTTC GCGGTTGGAC
GATATGGCGT TGACGGTTCT 201 GTGGCTGTTT GTTTGTACGG TCGGGGCGAA
CCTGCTTGCT TTGGCAGTGT 251 TGGGAAAGTT ATTCCCGTGG CGGATAAAGG
GGAAAGGGAA GGGCGTTTCG 301 GTCGGCGTGT CGGGCAGTGT GGGGCAGCTC
GGATGCGTGC TGCTCGGATT 351 TGCATTCGGC AAACTGATGC GCGATATTTG
GATGCCGTCT GAAAGCGCGG 401 GCATGTATTG TCTGATGCTG CTGGTGTTCC
TCATCGGCGT ACAGCTCAAA 451 AGCAGCGGCG TATCGTTGCG GCAGGTTTTG
GTCAACCGCA GGGGTATTCG 501 GTTGTCGGTC TGGTTTATGC TTTCATCTCT
TTCGGGCGGG CTGCTGTTTG 551 CCGCATCGAC AGACGGTGTG TCGTGGACGA
AAGGTTTGGC GATGGCTTCC 601 GGCTTCGGTT GGTATTCCCT CTCGGGTTTG
GTCATGACCG AGGCTTACGG 651 CGCGGTATGG GGCAGCATCA TGCTGCTGAA
CGATTTGGCA CGAGAGCTGT 701 TTGCACTGGC ATTTATCCCG CTGCTGATGA
AGCGTTTTCC AGATGCGGCG 751 GTGGGGGTTG GCGGTGCGAC CAGTATGGAT
TTTACATTGC CCGTGATTCA 801 GGGTGCGGGC GGTTTGGAAG TCGTGCCGGT
AGCGGTCAGC TTCGGCGTGG 851 TGGTCAATAT CGCCGCCCCG TTTCTGATGG
TGGTGTTTTC CGCTTTGGGT 901 TGA
This corresponds to the amino acid sequence <SEQ ID 2334; ORF
700>:
TABLE-US-02770 m700.pep 1 MDSLMTLLSV LIPMFAGFFI RVPKPYLPAL
DKVLSVLVYA VLLLIGVSLS 51 RVEDLGSRLD DMALTVLWLF VCTVGANLLA
LAVLGKLFPW RIKGKGKGVS 101 VGVSGSVGQL GCVLLGFAFG KLMRDIWMPS
ESAGMYCLML LVFLIGVQLK 151 SSGVSLRQVL VNRRGIR LSV WFMLSSLSGG
LLFAASTDGV SWTKGLAMAS 201 GFGWYSLSGL VMTEAYGAVW GSIMLLNDLA
RELFALAFIP LLMKRFPDAA 251 VGVGGATSMD FTLPVIQGAG GLEVVPVAVS
FGVVVNIAAP FLMVVFSALG 301 *
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 700 shows 94.7% identity over a 300 aa overlap with a
predicted ORF (ORF700.ng) from N. gonorrhoeae:
TABLE-US-02771 m700/g700 10 20 30 40 50 60 m700.pep
MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLD
|:|||||:|||:||||||||||||||||| ||||||||||||||||||||||||||||| g700
MSSLMTLFSVLVPMFAGFFIRVPKPYLPASDKVLSVLVYAVLLLIGVSLSRVEDLGSRLG 10 20
30 40 50 60 70 80 90 100 110 120 m700.pep
DMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFAFG
|||||||||||||||||||||||||||10 |||| |||||||||||||| |||||||||: | g700
DMALTVLWLFVCTVGANLLALAVLGKLSPWRIGGKGKGVSVGVSGSVRQLGCVLLGFVSG 70 80
90 100 110 120 130 140 150 160 170 180 m700.pep
KLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVLVNRRGIRLSVWFMLSSLSGG |||
|||||||:||||||||||||||||||||||||||||:|||||||||||:||||||| g700
KLMCDIWMPSENAGMYCLMLLVFLIGVQLKSSGVSLRQVLLNRRGIRLSVWFILSSLSGG 130
140 150 160 170 180 190 200 210 220 230 240 m700.pep
LLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGAVWGSIMLLNDLARELFALAFIP
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| g700
LLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGAVWGSIMLLNDLARELFALAFIP 190
200 210 220 230 240 250 260 270 280 290 300 m700.pep
LLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVPVAVSFGVVVNIAAPFLMVVFSALG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g700
LLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVPVAVSFGVVVNIAAPFLMVVFSTLG 250
260 270 280 290 300 m700.pep X | g700 X
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2335>:
TABLE-US-02772 a700.seq 1 ATGGACAGCC TGATGACGTT GCTTTCGGTA
TTGATACCGA TGTTTGCCGG 51 ATTTTTTATC CGTGTGCCCA AGCCTTACCT
GCCCGCTTTG GATAAGGTGC 101 TATCGGTCTT GGTGTATGCT GTGCTGCTGC
TGATCGGCGT CTCGTTGTCG 151 CGCGTGGAGG ATTTGGGTTC GCGGTTGGAC
GATATGGCGT TGACGGTTCT 201 GTGGCTGTTT GTTTGTACGG TCGGGGCGAA
CCTGCTTGCT TTGGCAGTGT 251 TGGGAAAGTT ATTCCCGTGG CGGATAAAGG
GGAAAGGGAA GGGCGTTTCG 301 GTCGGTGTGT CGGGCAGTGT GGGGCAGCTC
GGATGCGTGC TGCTCGGATT 351 TGCATCCGGC AAACTGATGC GCGATATTTG
GATGCCGTCT GAAAACGCGG 401 GTATGTATTG TCTGATGCTG CTGGTGCTCN
TCATCGGCGT ACAGCTCAAA 451 AGCAGCGGCG TATCGTTGCG GCAGGTTTTG
GTCAACCGCA GGGGTATTCG 501 GTTGTCGGTC TGGTTTATGC TTTCATCTCT
TTCAGGCGGG CTGCTGTTTG 551 CCGCATCGGC AGACGGTGTG TCGTGGGTGA
AAGGTTTGGC GATGGCTTCC 601 GGCTTCGGTT GGTATTCCCT CTCGGGTTTG
GTGATGACCG AGGCTTACGG 651 CGCGGTATGG GGCAGTATCG CGCTTTTGAA
CGATTTGGCA CGAGAGCTGT 701 TCGCGCTGGC ATTTATTCCG CTGCTGATGA
AGCGTTTTCC CGATGCGGCA 751 GTGGGGGTCG GCGGCGCGAC CAGTATGGAT
TTCACATTGC CCGTGATTCG 801 GGGTGCGGGC GGCTTGGAAG CCGTACCGGT
AGCGGTCAGC TTCGGCGTGG 851 TGGTCAATAT CGCCGCTCCG TTTCTGATGG
TGGTGTTTTC CGCTTTGGGC 901 TGA
This corresponds to the amino acid sequence <SEQ ID 2336; ORF
700.a>:
TABLE-US-02773 a700.pep 1 MDS LMTLLSV LIPMFAGFFI RVPKPYLPAL
DKVLSVLVYA VLLLIGVSLS 51 RVEDLGSRLD DMALTVLW LF VCTVGANLLA
LAVLGKLFPW RIKGKGKGVS 101 VGVSGSVGQL GCVLLGFASG KLMRDIWMPS EN
AGMYCLML LVLXIGVQLK 151 SSGVSLRQVL VNRRGIRLSV WFMLSSLSGG LLFAASADGV
SWVKGLAMAS 201 GFGWYSLSGL VMTEAYGAVW GSIALLNDLA RELFALAFIP
LLMKRFPDAA 251 VGVGGATSMD FTLPVIRGAG GLEAVPVAVS FG VVVNIAAP
FLMVVFSALG 301 * m700/a700 97.0% identity in 300 aa overlap 10 20
30 40 50 60 m700.pep
MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a700
MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLD 10 20
30 40 50 60 70 80 90 100 110 120 m700.pep
DMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFAFG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | a700
DMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASG 70 80
90 100 110 120 130 140 150 160 170 180 m700.pep
KLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVLVNRRGIRLSVWFMLSSLSGG
|||||||||||:||||||||||: |||||||||||||||||||||||||||||||||||| a700
KLMRDIWMPSENAGMYCLMLLVLXIGVQLKSSGVSLRQVLVNRRGIRLSVWFMLSSLSGG 130
140 150 160 170 180 190 200 210 220 230 240 m700.pep
LLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGAVWGSIMLLNDLARELFALAFIP
||||||:|||||:|||||||||||||||||||||||||||||| |||||||||||||||| a700
LLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP 190
200 210 220 230 240 250 260 270 280 290 300 m700.pep
LLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVPVAVSFGVVVNIAAPFLMVVFSALG
||||||||||||||||||||||||||:||||||:|||||||||||||||||||||||||| a700
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG 250
260 270 280 290 300 m700.pep X | a700 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2337>:
TABLE-US-02774 g701.seq 1 ATGTCTTGGC ACATATTCCA AGTTGCAGGG
ATACCGACCG CTTCGATGGC 51 ACAATCTACG CCGTCTTCGC CGACGATGGC
GAAAACTTGT TTGGAGACGT 101 CGCCGGAAGC GGGGCTGATG GTATGGGTCG
CGCCCAACTC TTTCGCCGGT 151 TTCAAACGGT TTTCGTCCAT ATCGCACACG
ATAATGGCGG CAGGGCTATA 201 CAGTTGGGCG GTCAACAAGG CGGACATACC
GACAGGGCCG GCACCTGCGA 251 TGAATACGGT ATCGCCGGGT TTCACATCGC
CGTATTGCAC GCCGATTTCG 301 TGGGCGGTCG GTAAAGCGTC GCTCAACAGC
AGGGCGATTT CTTCGTTGAC 351 GTTGTCGTGC GGCGGCACGA GGCTGTTGTC
GGCATAA
This corresponds to the amino acid sequence <SEQ ID 2338; ORF
701>:
TABLE-US-02775 g701.pep 1 10 MSWHIFQVAG IPTASMAQST PSSPTMAKTC
LETSPEAGLM VWVAPNSFAG 51 FKRFSSISHT IMAAGLYSWA VNKADIPTGP
APAMNTVSPG FTSPYCTPIS 101 WAVGKASLNS RAISSLTLSC GGTRLLSA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2339>:
TABLE-US-02776 m701.seq 1 ATGTCTTGGC ACATATTCCA TGTAGCAGGG
ATACCGACGG CTTCGATGGC 51 GCAATCCACG CCGTCTTCGC CGACGATGGC
AAAGACTTGT TTGGATACTT 101 CGCCGGAAGC AGGGTTAATG GTATGGGTCG
CACCCAATTC TTTCGCCAGT 151 TTCAAACGGT TTTCGTCCAT ATCGCAAACG
ATGATGGCGG CGGGACTGTA 201 CAGTTGGGCG GTCAACAGGG CGGACATACC
GACAGGGCCT GCCCCAGCGA 251 TGAATACGGT GTCGCCGGGT TTGACATCGC
CGTATTGCAC GCCGATTTCG 301 TGGGCGGTCG GCAAAGCGTC GCTCAACAAC
AGGGCGATTT CTTCGTTGAC 351 ATTATCGGGC AGCGGAACGA GGCTGTTGTC
GGCATAA
This corresponds to the amino acid sequence <SEQ ID 2340; ORF
701>:
TABLE-US-02777 m701.pep 1 MSWHIFHVAG IPTASMAQST PSSPTMAKTC
LDTSPEAGLM VWVAPNSFAS 51 FKRFSSISQT MMAAGLYSWA VNRADIPTGP
APAMNTVSPG LTSPYCTPIS 101 WAVGKASLNN RAISSLTLSG SGTRLLSA*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 701 shows 92.2% identity over a 128 aa overlap with a
predicted ORF (ORF701.a) from N. gonorrhoeae:
TABLE-US-02778 m701/g701 10 20 30 40 50 60 m701.pep
MSWHIFHVAGIPTASMAQSTPSSPTMAKTCLDTSPEAGLMVWVAPNSFASFKRFSSISQT
||||||:||||||||||||||||||||||||:|||||||||||||||||:||||||||:| g701
MSWHIFQVAGIPTASMAQSTPSSPTMAKTCLETSPEAGLMVWVAPNSFAGFKRFSSISHT 10 20
30 40 50 60 70 80 90 100 110 120 m701.pep
MMAAGLYSWAVNRADIPTGPAPAMNTVSPGLTSPYCTPISWAVGKASLNNRAISSLTLSG
:|||||||||||:|||||||||||||||||:||||||||||||||||||:||||||||| g701
IMAAGLYSWAVNKADIPTGPAPAMNTVSPGFTSPYCTPISWAVGKASLNSRAISSLTLSC 70 80
90 100 110 120 129 m701.pep SGTRLLSAX :|||||||| g701 GGTRLLSAX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2341>:
TABLE-US-02779 a701.seq 1 ATGTCTTGGC ACATATTCCA AGTTGCAGGG
ATACCGACGG CTTCGATCGC 51 GCAGTCCACG CCGTCTTCGC CGACGATAGC
GGCAACTTGC TTGCTTACAT 101 CGCCGGAAGC AGGGTTAATG GTATGGGTTG
CGCCCAACTC TTTCGCCAGT 151 TTCAAACGGT TTTCGTCCAT ATCGCAAACA
ATGATGGCGG CGGGGCTGTA 201 CAGTTGGGCG GTCGGCAAGG CGGACATACC
GACAGGAGCG GCACCTGCGA 251 TGAATACGGT GTCGCCGGGT TTGACATCGC
CGTATTGCAC GCCGATTTCG 301 TGTGCGGTCG GCAAAGCGTC GCTCAACAAC
AGGGCGACTT CTTCGTTGAC 351 GTTGTCGGGC AGCGGCACGA GGCTGTTGTC
GGCATAA
This corresponds to the amino acid sequence <SEQ ID 2342; ORF
701.a>:
TABLE-US-02780 a701.pep 1 10 MSWHIFQVAG IPTASIAQST PSSPTIAATC
LLTSPEAGLM VWVAPNSFAS 51 FKRFSSISQT MMAAGLYSWA VGKADIPTGA
APAMNTVSPG LTSPYCTPIS 101 CAVGKASLNN RATSSLTLSG SGTRLLSA* m701/a701
92.2% identity in 128 aa overlap 10 20 30 40 50 60 m701.pep
MSWHIFHVAGIPTASMAQSTPSSPTMAKTCLDTSPEAGLMVWVAPNSFASFKRFSSISQT
||||||:||||||||:|||||||||:| ||| |||||||||||||||||||||||||||| a701
MSWHIFQVAGIPTASIAQSTPSSPTIAATCLLTSPEAGLMVWVAPNSFASFKRFSSISQT 10 20
30 40 50 60 70 80 90 100 110 120 m701.pep
MMAAGLYSWAVNRADIPTGPAPAMNTVSPGLTSPYCTPISWAVGKASLNNRAISSLTLSG
|||||||||||::|||||| |||||||||||||||||||| ||||||||||| ||||||| a701
MMAAGLYSWAVGKADIPTGAAPAMNTVSPGLTSPYCTPISCAVGKASLNNRATSSLTLSG 70 80
90 100 110 120 129 m701.pep SGTRLLSAX ||||||||| a701 SGTRLLSAX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2343>:
TABLE-US-02781 g702.seq 1 ATGCCGTGTt ccaAAGCCAG TTGGACTTCG
CCCGGAGtgg cAACGCCGGG 51 AATCAGGGGA ATGCCGCTGT TGCGGCCGGC
TCTGGCGAGG GATTCGTGCA 101 AACCCGGGCT GATGGCGAAA ACCGCGCCTG
CGTCTTCGAC GGCTTTGAGC 151 TGTTCGGGAT TGGTTACCGT ACCTGCGCCG
ATGATGGCGT TGGGCATTTC 201 TTTGGCAATC AGGCGGATGG CCTCGAGTCC
GACGGGGGTG CGCAAGGTAA 251 TTTCGAGGGT GGGGATGCCG CCTTCGACAA
GGGCGCGGGA CAAATCGACG 301 GCGGTGCTTA AGTCGTCAAt cgCCATCACA
GGCACAACTG CGCCGGCGGT 351 CAGGATTTCG cggggggtca gttga
This corresponds to the amino acid sequence <SEQ ID 2344; ORF
702>:
TABLE-US-02782 g702.pep 1 MPCSKASWTS PGVATPGIRG MPLLRPALAR
DSCKPGLMAK TAPASSTALS 51 CSGLVTVPAP MMALGISLAI RRMASSPTGV
RKVISRVGMP PSTRARDKST 101 AVLKSSIAIT GTTAPAVRIS RGVS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2345>:
TABLE-US-02783 m702.seq 1 ATGCCGTGTT CCAAAGCCAG TTGGATTTCG
CCCGGGGTGG CAACACCGGG 51 AATCAGGGGG ATGCCGCTGT TGTGGCCGGC
TTTGGCGAGG GATTCATGCA 101 GCCCCGGGCT GATGGCGAAA ACCGCGCCTG
CGTCTTCGAC GGCTTTGAGC 151 TGTTCGGGAT TGGTTACCGT ACCTGCGCCG
ACGATGGCGT TGGGCACTTC 201 TTTGGCAATC AGGCGGATGG CATCGAGGCC
GACAGGGGTG CGCAGGGTGA 251 TTTCGAGGGT AGGGATGCCG CCTTCGACAA
GGGCGTGGGA CAAATCGATG 301 GCGGTGCTTA AGTCGTCAAT CGCCATTACC
GGCACAACTG CGCCGGCGGT 351 CAAAATTTCG CGGGGGGTCA GTTTGGACAT
TTCGGTTCTC CGGGTGGAAT 401 GGGGTATTTT ATTAAGATGG GACAGGTTGT AG
This corresponds to the amino acid sequence <SEQ ID 2346; ORF
702>:
TABLE-US-02784 m702.pep 1 MPCSKASWIS PGVATPGIRG MPLLWPALAR
DSCSPGLMAK TAPASSTALS 51 CSGLVTVPAP TMALGTSLAI RRMASRPTGV
RRVISRVGMP PSTRAWDKSM 101 AVLKSSIAIT GTTAPAVKIS RGVSLDISVL
RVEWGILLRW DRL*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 702 shows 91.9% identity over a 124 aa overlap with a
predicted ORF (ORF702.a) from N. gonorrhoeae:
TABLE-US-02785 m702/g702 10 20 30 40 50 60 m702.pep
MPCSKASWISPGVATPGIRGMPLLWPALARDSCSPGLMAKTAPASSTALSCSGLVTVPAP
|||||||| ||||||||||||||| ||||||||:|||||||||||||||||||||||||| g702
MPCSKASWTSPGVATPGIRGMPLLRPALARDSCKPGLMAKTAPASSTALSCSGLVTVPAP 10 20
30 40 50 60 70 80 90 100 110 120 m702.pep
TMALGTSLAIRRMASRPTGVRRVISRVGMPPSTRAWDKSMAVLKSSIAITGTTAPAVKIS ||||
||||||||| |||||:||||||||||||| ||| |||||||||||||||||:|| g702
MMALGISLAIRRMASSPTGVRKVISRVGMPPSTRARDKSTAVLKSSIAITGTTAPAVRIS 70 80
90 100 110 120 130 140 m702.pep RGVSLDISVLRVEWGILLRWDRLX |||| g702
RGVSX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2347>:
TABLE-US-02786 a702.seq 1 ATGCCGTGTT CCAAAGCCAG TTGGATTTCG
CCCGGGGTGG CAACACCGGG 51 AATCAGGGGG ATGCCGCTGT TGTGGCCGGC
TTTGGCGAGG GATTCATGCA 101 GCCCCGGGCT GATGGCGAAA ACCGCGCCTG
CGTCTTCGAC GGCTTTGAGC 151 TGTTCGGGAT TGGTTACCGT ACCTGCGCCG
ACGATGGCGT TGGGCACTTC 201 TTTGGCAATC AGGCGGATGG CATCGAGGCC
GACAGGGGTG CGCAGGGTGA 251 TTTCGAGGGT AGGGATGCCG CCTTCGACAA
GGGCGTGGGA CAAATCGATG 301 GCGGTGCTTA AGTCGTCAAT CGCCATTACC
GGCACAACTG CGCCGGCGGT 351 CAAAATTTCG CGGGGGGTCA GTTTGGACAT
TTCGGTTCTC CGGGTGGAAT 401 GGGGTATTTT ATTAAGATGG GACAGGTTGT AG
This corresponds to the amino acid sequence <SEQ ID 2348; ORF
702.a>:
TABLE-US-02787 a702.pep 1 MPCSKASWIS PGVATPGIRG MPLLWPALAR
DSCSPGLMAK TAPASSTALS 51 CSGLVTVPAP TMALGTSLAI RRMASRPTGV
RRVISRVGMP PSTRAWDKSM 101 AVLKSSIAIT GTTAPAVKIS RGVSLDISVL
RVEWGILLRW DRL* m702/a702 100.0% identity in 143 aa overlap 10 20
30 40 50 60 m702.pep
MPCSKASWISPGVATPGIRGMPLLWPALARDSCSPGLMAKTAPASSTALSCSGLVTVPAP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a702
MPCSKASWISPGVATPGIRGMPLLWPALARDSCSPGLMAKTAPASSTALSCSGLVTVPAP 10 20
30 40 50 60 70 80 90 100 110 120 m702.pep
TMALGTSLAIRRMASRPTGVRRVISRVGMPPSTRAWDKSMAVLKSSIAITGTTAPAVKIS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a702
TMALGTSLAIRRMASRPTGVRRVISRVGMPPSTRAWDKSMAVLKSSIAITGTTAPAVKIS 70 80
90 100 110 120 130 140 m702.pep RGVSLDISVLRVEWGILLRWDRLX
|||||||||||||||||||||||| a702 RGVSLDISVLRVEWGILLRWDRLX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2349>:
TABLE-US-02788 g703.seq 1 ATGAAAGCAA AAATCCTGAC TTCCGTTGCG
CTGCTTGCCT GTTCCGGCAG 51 CCTGTTTGCC CAAACGCTGG CAACCGTTAA
CGGTCAGAAA ATCGACAGTT 101 CCGTCATCGA TGCGCAGGTT GCCGCATTCC
GTGCGGAAAA CAGCCGTGCC 151 GAAGACACGC CGCAACTGCG CCAATCCCTG
CTGGAAAACG AAGTGGTCAA 201 CACCGTGGTC GCACAGGAAG TGAAACGCCT
GAAACTCGAC CGGTCGGCAG 251 AGTTTAAAGA TGCGCTTGCC AAATTGCGTG
CCGAAGCGAA AAAGTCGGGC 301 GACGACAAGA AACCGTCCTT CAAAACCGTT
TGGCAGGCGG TAAAATATGG 351 CTTGAACGGC GAGGCATACG CACTGCATAT
CGCCAAAACC CAACCGGTTT 401 CCGAGCAGGA AGTAAAAGCC GTTTACGACA
ATATCAGCGG TTTTTATAAA 451 GGCACGCAGG AAGTCCAGTT GGGCGAAATC
CTGACCGACA AGGAAGAAAA 501 TGCGAAAAAA GCGGTTGCCG ATTTGAAGGC
GAAAAAAGGT TTTGATGCCG 551 TTTTGAAACA ATACTCGCTC AACGACCGCA
CCAAACGGAC CGGCGCGCCG 601 GACGGATATG TGCCGCTGAA AGATTTGGAA
CAGGGTGTTC CGCCGCTTTA 651 TCAGGCAATT AAGGACTTGA AAAAAGGCGA
ATTTACGGCA ACGCCGCTGA 701 AAAACGGCGA TTTCTACGGC GTTTATTATG
TCAACGACAG CCGcgaggTG 751 AAAGTGCCTT CTTTTGACGA AATGAAAGGA
CAGATTGCCG GCAACCTTCA 801 GGCGGAACGG ATTGACCGTG CCGTctgTGc
gcTGTTgggt aaggCAAACA 851 TCAAACCTGC AAAATAA
This corresponds to the amino acid sequence <SEQ ID 2350; ORF
703>:
TABLE-US-02789 g703.pep 1 MKAKILTSVA LLACSGSLFA QTLATVNGQK
IDSSVIDAQV AAFRAENSRA 51 EDTPQLRQSL LENEVVNTVV AQEVKRLKLD
RSAEFKDALA KLRAEAKKSG 101 DDKKPSFKTV WQAVKYGLNG EAYALHIAKT
QPVSEQEVKA VYDNISGFYK 151 GTQEVQLGEI LTDKEENAKK AVADLKAKKG
FDAVLKQYSL NDRTKRTGAP 201 DGYVPLKDLE QGVPPLYQAI KDLKKGEFTA
TPLKNGDFYG VYYVNDSREV 251 KVPSFDEMKG QIAGNLQAER IDRAVCALLG
KANIKPAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2351>:
TABLE-US-02790 m703.seq 1 ATGAAAGCAA AAATCCTGAC TTCCGTTGCA
CTGCTTGCCT GTTCCGGCAG 51 CCTGTTTGCC CAAACGCTGG CAACCGTCAA
CGGTCAGAAA ATCGACAGTT 101 CCGTCATCGA TGCGCAGGTT GCCGCATTCC
GTGCGGAAAA CAGCCGTGCC 151 GAAGACACGC CGCAACTGCG CCAATCCCTG
CTGGAAAACG AAGTGGTCAA 201 TACCGTGGTC GCACAGGAAG TGAAACGCCT
GAAACTCGAC CGGTCGGCAG 251 AGTTTAAAAA TGCGCTTGCC AAATTGCGTG
CCGAAGCGAA AAAGTCGGGC 301 GACGACAAGA AACCGTCCTT CAAAACCGTT
TGGCAGGCGG TAAAATATGG 351 CTTGAACGGC GAGGCATACG CATTGCATAT
CGCCAAAACC CAACCGGTTT 401 CCGAGCAGGA AGTAAAAGCC GCATATGACA
ATATCAGCGG TTTTTACAAA 451 GGTACGCAGG AAGTCCAGTT GGGCGAAATC
CTGACCGACA AGGAAGAAAA 501 TGCAAAAAAA GCGGTTGCCG ACTTGAAGGC
GAAAAAAGGT TTCGATGCCG 551 TCTTGAAACA ATATTCCCTC AACGACCGTA
CCAAACAGAC CGGTGCGCCG 601 GTCGGATATG TGCCGCTGAA AGATTTGGAA
CAGGGTGTTC CGCCGCTTTA 651 TCAGGCAATT AAGGACTTGA AAAAAGGCGA
ATTTACGGCA ACGCCGCTGA 701 AAAACGGCGA TTTCTACGGC GTTTATTATG
TCAACGACAG CCGCGAGGTA 751 AAAGTGCCTT CTTTTGATGA AATGAAAGGA
CAGATTGCGG GCAACCTTCA 801 GGCGGAACGG ATTGACCGTG CCGTCGGTGC
ACTGTTGGGC AAGGCAAACA 851 TCAAACCTGC AAAATAA
This corresponds to the amino acid sequence <SEQ ID 2352; ORF
703>:
TABLE-US-02791 m703.pep 1 MKAKILTSVA LLACSGSLFA QTLATVNGQK
IDSSVIDAQV AAFRAENSRA 51 EDTPQLRQSL LENEVVNTVV AQEVKRLKLD
RSAEFKNALA KLRAEAKKSG 101 DDKKPSFKTV WQAVKYGLNG EAYALHIAKT
QPVSEQEVKA AYDNISGFYK 151 GTQEVQLGEI LTDKEENAKK AVADLKAKKG
FDAVLKQYSL NDRTKQTGAP 201 VGYVPLKDLE QGVPPLYQAI KDLKKGEFTA
TPLKNGDFYG VYYVNDSREV 251 KVPSFDEMKG QIAGNLQAER IDRAVGALLG
KANIKPAK*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 703 shows 98.3% identity over a 288 aa overlap with a
predicted ORF (ORF703.a) from N. gonorrhoeae:
TABLE-US-02792 m703/g703 10 20 30 40 50 60 m703.pep
MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g703
MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSL 10 20
30 40 50 60 70 80 90 100 110 120 m703.pep
LENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVKYGLNG
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| g703
LENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDDKKPSFKTVWQAVKYGLNG 70 80
90 100 110 120 130 140 150 160 170 180 m703.pep
EAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKKAVADLKAKKG
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| g703
EAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEILTDKEENAKKAVADLKAKKG 130
140 150 160 170 180 190 200 210 220 230 240 m703.pep
FDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQAIKDLKKGEFTATPLKNGDFYG
|||||||||||||||:|||| |||||||||||||||||||||||||||||||||||||| g703
FDAVLKQYSLNDRTKRTGAPDGYVPLKDLEQGVPPLYQAIKDLKKGEFTATPLKNGDFYG 190
200 210 220 230 240 250 260 270 280 289 m703.pep
VYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVGALLGKANIKPAKX
|||||||||||||||||||||||||||||||||||| ||||||||||||| g703
VYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVCALLGKANIKPAKX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2353>:
TABLE-US-02793 a703.seq 1 ATGAAAGCAA AAATCCTGAC TTCCGTTGCA
CTGCTTGCCT GTTCCGGCAG 51 CCTGTTTGCC CAAACGCTGG CAACCGTCAA
CGGTCAGAAA ATCGACAGTT 101 CCGTCATTGA TGCGCAGGTT GCCGCATTCC
GTGCGGAAAA CAGCCGTGCC 151 GAAGACACGC CGCAACTGCG CCAATCCCTG
CTGGAAAACG AAGTGGTCAA 201 CACCGTGGTC GCACAGGAAG TGAAACGCCT
GAAACTCGAC CGGTCGGCAG 251 AGTTTAAAAA TGCGCTTGCC AAATTGCGTG
CCGAAGCGAA AAAGTCGGGC 301 GACGACAAGA AACCGTCCTT CAAAACCGTT
TGGCAGGCGG TAAAATATGG 351 CTTGAACGGC GAGGCATACG CGCTGCATAT
CGCCAAAACC CAACCGGTTT 401 CCGAGCAGGA AGTAAAAGCC GCATATGACA
ATATCAGCGG TTTTTACAAA 451 GGTACGCAGG AAGTCCAGTT GGGCGAAATC
CTGACCGACA AGGAAGAAAA 501 TGCAAAAAAA GCGGTTGCCG ACTTGAAGGC
GAAAAAAGGT TTCGATGCCG 551 TCTTGAAACA ATATTCCCTC AACGACCGTA
CCAAACAGAC CGGTGCGCCG 601 GTCGGATATG TGCCGCTGAA AGATTTGGAA
CAGGGTGTTC CGCCGCTTTA 651 TCAGGCAATT AAGGACTTGA AAAAAGGCGA
ATTTACGGCA ACGCCGCTGA 701 AAAACGGCGA TTTCTACGGC GTTTATTATG
TCAACGACAG CCGCGAGGTA 751 AAAGTGCCTT CTTTTGATGA AATGAAAGGA
CAGATTGCGG GCAACCTTCA 801 GGCGGAACGG ATTGACCGTG CCGTCGGTGC
ACTGTTGGGC AAGGCAAACA 851 TCAAACCTGC AAAATAA
This corresponds to the amino acid sequence <SEQ ID 2354; ORF
703.a>:
TABLE-US-02794 a703.pep 1 MKAKILTSVA LLACSGSLFA QTLATVNGQK
IDSSVIDAQV AAFRAENSRA 51 EDTPQLRQSL LENEVVNTVV AQEVKRLKLD
RSAEFKNALA KLRAEAKKSG 101 DDKKPSFKTV WQAVKYGLNG EAYALHIAKT
QPVSEQEVKA AYDNISGFYK 151 GTQEVQLGEI LTDKEENAKK AVADLKAKKG
FDAVLKQYSL NDRTKQTGAP 201 VGYVPLKDLE QGVPPLYQAI KDLKKGEFTA
TPLKNGDFYG VYYVNDSREV 251 KVPSFDEMKG QIAGNLQAER IDRAVGALLG
KANIKPAK* m703/a703 100.0% identity in 288 aa overlap 10 20 30 40
50 60 m703.pep
MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a703
MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSL 10 20
30 40 50 60 70 80 90 100 110 120 m703.pep
LENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVKYGLNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a703
LENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDDKKPSFKTVWQAVKYGLNG 70 80
90 100 110 120 130 140 150 160 170 180 m703.pep
EAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKKAVADLKAKKG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a703
EAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENAKKAVADLKAKKG 130
140 150 160 170 180 190 200 210 220 230 240 m703.pep
FDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQAIKDLKKGEFTATPLKNGDFYG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a703
FDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQAIKDLKKGEFTATPLKNGDFYG 190
200 210 220 230 240 250 260 270 280 289 m703.pep
VYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVGALLGKANIKPAKX
||||||||||||||||||||||||||||||||||||||||||||||||| a703
VYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVGALLGKANIKPAKX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2355>:
TABLE-US-02795 a704.seq 1 ATGAAAAAAA CCTGTTTCCA CTGCGGGCTG
GACGTTCCCG AAAACCTGCA 51 TCTGACCGTC CGTTACGAAA ACGAAGACCG
CGAAACCTGC TGCGCCGGTT 101 GTCAGGCAGT CGCACAAAGC ATTATTGACG
CGGGCTTGGG CAGTTATTAC 151 AAACAACGCA CCGCCGACGC GCAAAAAACC
GAGCTGCCGC CCCAAGAAAT 201 CCTCGACCAA ATCCGCCTGT ACGACCTGCC
CGAAGTCCAG TCCGACTTTG 251 TGGAAACCCA CGGCGGCACG CGCGAGGCGG
TTTTAATGCT CGGCGGCATC 301 ACCTGCGCCG CCTGCGTCTG GCTGATCGAA
CAGCAGCTTT TGCGTACAGA 351 CGGCATCGTC CGCATCGACC TCAATTACAG
CACGCACCGC TGCCGCGTCG 401 TCTGGGACGA CGGCAAAATC CGCCTTTCCG
ACATTCTGTT GAAAATCAGG 451 CAGATAGGCT ACACCGCCGC ACCCTATGAC
GCGCAAAAAA TCGAAGCCGC 501 CAACCAAAAA GAACGCAAAC AATACATCGT
CCGCCTCGCC GTTGCCGGGC 551 TGGGGATGAT GCAGACGATG ATGTTCGCGC
TGCCGACCTA CCTTTACGGC 601 GGCGACATCG AACCCGATTT CCTGCAAATC
CTCCATTGGG GCGGCTTTTT 651 AATGGTGCTG CCCGTCGTAT TCTATTGCGC
CGTCCCGTTT TATCAAGGCG 701 CGCTGCGCGA CTTGAAAAAC CGCCGCGTCG
GCATGGATAC GCCGATTACC 751 GTCGCCATCA TCATGACCTT TATCGCCGGC
GTTTACAGCC TTGCGACAAA 801 TGCGGGGCAG GGGATGTATT TCGAATCCAT
CGCGATGCTG CTGTTTTTCC 851 TGCTGGGCGG ACGCTTTATG GAACACATTG
CCCGCCGTAA GGCAGGCGAT 901 GCCGCCGAGA GGCTGGTGAA GCTGATTCCT
GCGTTTTGCC ATCATATGCC 951 CGATTACCCC GATACGCAGG AAACCTGCGA
GGCAGCTGTC GTCAAATTGA 1001 AGGCGGGCGA TATCGTGCTG GTCAAACCGG
GCGAAACCAT CCCCGTTGAC 1051 GGCACGGTGC TGGAAGGAAG CAGTGCCGTC
AACGAATCTA TGCTGACCGG 1101 CGAGAGCCTG CCCGTCGCCA AAATGCCGTC
TGAAAAAGTA ACCGCCGGCA 1151 CACTCAACAC GCAAAGCCCC CTGATTATAC
GCACCGACCG CACCGGCGGC 1201 GGCACGCGAC TGTCGCACAT CGTCCGCCTG
CTCGACCGCG CCTTAGCGCA 1251 AAAACCGCGC ACTGCCGAGT TGGCGGAACA
ATACGCCTCG TCTTTCATAT 1301 TCGGCGAACT CCTGCTTGCC GTCCCCGTCT
TCATCGGCTG GACGCTGTAC 1351 GCCGACGCGC ACACCGCATT GTGGATTACC
GTCGCCCTGC TGGTCATTAC 1401 CTGCCCCTGC GCCTTATCGC TTGCCACGCC
GACCGCGCTG GCAGCTTCTA 1451 CCGGTACGCT GGCGCGCGAA GGTATTTTAA
TCGGCGGAAA GCAGGCAATC 1501 GAAACCCTCG CCCAAACCAC CGACATCATC
TTCGACAAAA CCGGCACGCT 1551 GACCCAAGGC AAACCCGCCG TCCGCCGTAT
CTCATTGTTG AGAGGCACAG 1601 ACGAAGCCTT TGTTCTCGCG GTGGCGCAGG
CTTTAGAACA ACAGTCCGAA 1651 CATCCCCTTG CCCGCGCCAT CCTCAACTGC
CGCATTTCAG ACGGCAGCGT 1701 CCCCGACATC GCTATTAAAC AACGCCTCAA
CCGCATCGGC GAAGGCGTGG 1751 GCGCGCAACT GACCGTCAAC GGCGAAACAC
AGGTTTGGGC ATTGGGCAGG 1801 GCATCCTATG TCGCCGAAAT TTCAGGTAAA
GAACCGCAAA CAGAAGGCGG 1851 CGGCAGCGCG GTTTACCTCG GCAGTCAAAG
CGGTTTCCAA GCCGTGTTCT 1901 ACCTGCAAGA CCCGCTCAAA GACAGCGCGG
CGGAGGCGGT GCGGCAGTTG 1951 GCAGGCAAAA ACCTGACGCT GCACATTCTC
AGCGGCGACC GTGAAACCGC 2001 CGTTGCCGAA ACCGCACGCG CCCTGGGTGT
CGCGCACTAC CGCGCCCAAG 2051 CCATGCCCGA GGACAAACTG GAATACGTCA
AAGCCTTGCA AAAAGAAGGG 2101 AAAAAAGTGC TGATGATAGG CGACGGCATC
AACGACGCGC CCGTTTTGGC 2151 GCAGGCAGAC GTATCCGCCG CCGCAGCGGG
CGGGACGGAT ATTGCGAGGG 2201 ACGGCGCGGA CATTGTGTTA TTGAACGAAG
ATTTGCGTAC CGTCGCCCAC 2251 CTGCTCGATC AGGCGCGGCG CACCCGCCAT
ATTATCCGGC AAAACCTGAT 2301 ATGGGCGGGC GCGTACAATA TCATTGCCGT
ACCGCTTGCC GTTTTGGGCT 2351 ATGTCCAACC GTGGATAGCC GCACTGGGTA
TGAGCTTCAG TTCGCTGGCG 2401 GTTTTGGGCA ACGCCCTGCG CCTTCACAAA
CGGGGGAAAA TGCAGTCTGA 2451 AAAAATGCCG TCCGAACAAT GA
This corresponds to the amino acid sequence <SEQ ID 2356; ORF
703>:
TABLE-US-02796 a704.pep 1 MKKTCFHCGL DVPENLHLTV RYENEDRETC
CAGCQAVAQS IIDAGLGSYY 51 KQRTADAQKT ELPPQEILDQ IRLYDLPEVQ
SDFVETHGGT REAVLMLGGI 101 TCAACVWLIE QQLLRTDGIV RIDLNYSTHR
CRVVWDDGKI RLSDILLKIR 151 QIGYTAAPYD AQKIEAANQK ERKQYIVRLA
VAGLGMMQTM MFALPTYLYG 201 GDIEPDFLQI LHWGGFLMVL PVVFYCAVPF
YQGALRDLKN RRVGMDTPIT 251 VAIIMTFIAG VYSLATNAGQ GMYFESIAML
LFFLLGGRFM EHIARRKAGD 301 AAERLVKLIP AFCHHMPDYP DTQETCEAAV
VKLKAGDIVL VKPGETIPVD 351 GTVLEGSSAV NESMLTGESL PVAKMPSEKV
TAGTLNTQSP LIIRTDRTGG 401 GTRLSHIVRL LDRALAQKPR TAELAEQYAS
SFIFGELLLA VPVFIGWTLY 451 ADAHTALWIT VALLVITCPC ALSLATPTAL
AASTGTLARE GILIGGKQAI 501 ETLAQTTDII FDKTGTLTQG KPAVRRISLL
RGTDEAFVLA VAQALEQQSE 551 HPLARAILNC RISDGSVPDI AIKQRLNRIG
EGVGAQLTVN GETQVWALGR 601 ASYVAEISGK EPQTEGGGSA VYLGSQSGFQ
AVFYLQDPLK DSAAEAVRQL 651 AGKNLTLHIL SGDRETAVAE TARALGVAHY
RAQAMPEDKL EYVKALQKEG 701 KKVLMIGDGI NDAPVLAQAD VSAAAAGGTD
IARDGADIVL LNEDLRTVAH 751 LLDQARRTRH IIRQNLIWAG AYNIIAVPLA
VLGYVQPWIA ALGMSFSSLA 801 VLGNALRLHK RGKMQSEKMP SEQ* m704/a704
99.8% identity in 823 aa overlap 10 20 30 40 50 60 m704.pep
MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDAGLGSYYKQRTADAQKT
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| a704
MKKTCFHCGLDVPENLHLTVRYENEDRETCCAGCQAVAQSIIDAGLGSYYKQRTADAQKT 10 20
30 40 50 60 70 80 90 100 110 120 m704.pep
ELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITCAACVWLIEQQLLRLDGIV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
ELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITCAACVWLIEQQLLRLDGIV 70 80
90 100 110 120 130 140 150 160 170 180 m704.pep
RIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYDAQKIEAANQKERKQYIVRLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
RIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYDAQKIEAANQKERKQYIVRLA 130
140 150 160 170 180 190 200 210 220 230 240 m704.pep
VAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLMVLPVVFYCAVPFYQGALRDLKN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
VAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLMVLPVVFYCAVPFYQGALRDLKN 190
200 210 220 230 240 250 260 270 280 290 300 m704.pep
RRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFESIAMLLFFLLGGRFMEHIARRKAGD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
RRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFESIAMLLFFLLGGRFMEHIARRKAGD 250
260 270 280 290 300 310 320 330 340 350 360 m704.pep
AAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLKAGDIVLVKPGETIPVDGTVLEGSSAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
AAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLKAGDIVLVKPGETIPVDGTVLEGSSAV 310
320 330 340 350 360 370 380 390 400 410 420 m704.pep
NESMLTGESLPVAKMPSEKVTAGTLNTQSPLIIRTDRTGGGTRLSHIVRLLDRALAQKPR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
NESMLTGESLPVAKMPSEKVTAGTLNTQSPLIIRTDRTGGGTRLSHIVRLLDRALAQKPR 370
380 390 400 410 420 430 440 450 460 470 480 m704.pep
TAELAEQYASSFIFGELLLAVPVFIGWTLYADAHTALWITVALLVITCPCALSLATPTAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
TAELAEQYASSFIFGELLLAVPVFIGWTLYADAHTALWITVALLVITCPCALSLATPTAL 430
440 450 460 470 480 490 500 510 520 530 540 m704.pep
AASTGTLAREGILIGGKQAIETLAQTTDIIFDRTGLLTQGKPAVRRISLLRGTDEAFVLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
AASTGTLAREGILIGGKQAIETLAQTTDIIFDRTGLLTQGKPAVRRISLLRGTDEAFVLA 490
500 510 520 530 540 550 560 570 580 590 600 m704.pep
VAQALEQQSEHPLARAILNCRISDGSVPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
VAQALEQQSEHPLARAILNCRISDGSVPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGR 550
560 570 580 590 600 610 620 630 640 650 660 m704.pep
ASYVAEISGKEPQTEGGGSAVYLGSQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHIL
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| a704
ASYVAEISGKEPQTEGGGSAVYLGSQSGFQAVFYLQDPLKDSAAEAVRQLAGKNLTLHIL 610
620 630 640 650 660 670 680 690 700 710 720 m704.pep
SGDRETAVAETARALGVAHYRAQAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
SGDRETAVAETARALGVAHYRAQAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQAD 670
680 690 700 710 720 730 740 750 760 770 780 m704.pep
VSAAAAGGTDIARDGADIVLLNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a704
VSAAAAGGTDIARDGADIVLLNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLA 730
740 750 760 770 780 790 800 810 820 m704.pep
VLGYVQPWIAALGMSFSSLAVLGNALRLHKRGKMQSEKMPSEQX
|||||||||||||||||||||||||||||||||||||||||||| a704
VLGYVQPWIAALGMSFSSLAVLGNALRLHKRGKMQSEKMPSEQX 790 800 810 820
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2357>:
TABLE-US-02797 g705.seq 1 GTGTTCAATA ATTTCCttgC CTCTCTGCCG
TTTATGACGG AAACACGCGC 51 TGATATGCTC ATCAGCGCGT TTTGGCCCAT
GGTTAAAGCC GGCTTTACAG 101 TGTCTTtgcC TTTGGCGATC GCTTCTTTCG
TTATCGGCAT GATTATTGCC 151 GTAGCCGTTG CTTTGGTAAG AATCATGCCT
TCCGGCGGTA TTTTCCAAAA 201 ATGCTTGTTG AAGCTGGTGG AATTTTATAT
TTCCGTCGTT CGCGGTACGC 251 CGCTGTTGGT TCAGCTTGTG ATTGTGTTTT
ACGGGCTGCC GTCCGTCGGC 301 ATCTATATCA ATCCGATTCC CGCCGCCATC
ATCGGCTTTT CGCTCAATGT 351 CGGCGCATAC GCTTCCGAAA CCATACGCGC
GGCGATTTTG TCCGTGCCGA 401 AAGGGCAGTG GGAAGCAGGT TTCTCCATCG
GTATGACCTA TATGCAGACG 451 TTCCGCCGCA TCGTCGCACC GCAGGCATTC
CGCGTCGCCG TTCCGCCGTT 501 GAGCAACGAG TTTATCGGCT TGTTCAAAAA
CACCTCGCTT GCCGCCGTGG 551 TAACGGTAAC GGAGCTTTTC CGTGTCGCAC
AGGAAACGGC AAACCGCACT 601 TATGACTTTT TGCCTGTCTA TATCGAAGCT
GCATTGGTTT ATTGGTGTTT 651 CTGTAAAGTG CTGTTTTTGA TTCAGGCGCG
TTTGGAAAAA CGTTTCGACC 701 GTTATGTCGC CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2358; ORF
705>:
TABLE-US-02798 g705.pep 1 VFNNFLASLP FMTETRADML ISAFWPMVKA
GFTVSLPLAI ASFVIGMIIA 51 VAVALVRIMP SGGIFQKCLL KLVEFYISVV
RGTPLLVQLV IVFYGLPSVG 101 IYINPIPAAI IGFSLNVGAY ASETIRAAIL
SVPKGQWEAG FSIGMTYMQT 151 FRRIVAPQAF RVAVPPLSNE FIGLFKNTSL
AAVVTVTELF RVAQETANRT 201 YDFLPVYIEA ALVYWCFCKV LFLIQARLEK
RFDRYVAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2359>:
TABLE-US-02799 m705.seq 1 GTGTTCAATA ATTTCCTTGC TTCGCTGCCG
TTTATGACGG AAACACGCGC 51 CGATATGATT GTCAGCGCGT TTTTGCCTAT
GGTCAAAGCC GGCTTCGCGG 101 TCTCTCTGCC TTTGGCGGCA GCTTCTTTCG
TTATCGGTAT GATGATTGCG 151 GTAGCCGTGG CTTTGGTGCG GATTATGCCC
GCCGGCGGCA TCGTGCGGAA 201 AATCCTGCTG AAATTGGTGG AATTTTATAT
TTCCGTCATT CGCGGTACGC 251 CGCTGTTGGT TCAGCTTGTG ATTGTGTTTT
ACGGGCTGCC TTCCGTCGGC 301 ATCTATATCG ACCCGATTCC TGCCGCCATC
ATCGGCTTTT CGCTCAATGT 351 CGGCGCATAC GCTTCCGAAA CCATACGCGC
GGCAATTTTG TCCGTACCTA 401 AAGGCCAATG GGAAGCAGGT TTCTCCATCG
GCATGACCTA TATGCAGACG 451 TTCCGCCGCA TTGTCGCGCC GCAGGCATTC
CGCGTTGCCG TGCCGCCTTT 501 GAGCAACGAG TTTATCGGTT TGTTTAAAAA
CACCTCGCTC GCGGCAGTCG 551 TGACGGTAAC GGAATTATTC CGCGTCGCGC
AGGAAACGGC AAACCGCACT 601 TATGACTTTT TGCCCGTCTA TATCGAAGCC
GCTTTGGTTT ACTGGTGTTT 651 TTGTAAAGTG CTGTTCCTGA TTCAGGCGCG
TTTGGAAAAA CGTTTCGACC 701 GCTACGTCGC CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2360; ORF
705>:
TABLE-US-02800 m705.pep 1 VFNNFLASLP FMTETRADMI VSAFLPMVKA
GFAVSLPLAA ASFVIGMMIA 51 VAVALVRIMP AGGIVRKILL KLVEFYISVI
RGTPLLVQLV IVFYGLPSVG 101 IYIDPIPAAI IGFSLNVGAY ASETIRAAIL
SVPKGQWEAG FSIGMTYMQT 151 FRRIVAPQAF RVAVPPLSNE FIGLFKNTSL
AAVVTVTELF RVAQETANRT 201 YDFLPVYIEA ALVYWCFCKV LFLIQARLEK
RFDRYVAK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 705
shows 95.0% identity over a 238 aa overlap with a predicted ORF
(ORF 705) from N. gonorrhoeae:
TABLE-US-02801 m705/g705 95.0% identity in 238 aa overlap 10 20 30
40 50 60 m705.pep
VFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMP
|||||||||||||||||||::||| |||||||:|||||| |||||||:|||||||||||| g705
VFNNFLASLPFMTETRADMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVALVRIMP 10 20
30 40 50 60 70 80 90 100 110 120 m705.pep
AGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAY :|||
:| |||||||||||:|||||||||||||||||||||||:|||||||||||||||| g705
SGGIFQKCLLKLVEFYISVVRGTPLLVQLVIVFYGLPSVGIYINPIPAAIIGFSLNVGAY 70 80
90 100 110 120 130 140 150 160 170 180 m705.pep
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g705
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL 130
140 150 160 170 180 190 200 210 220 230 239 m705.pep
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAKX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g705
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAKX 190 200
210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2361>:
TABLE-US-02802 a705.seq 1 GTGTTCAATA ATTTCCTTGC TTCGCTGCCG
TTTATGACGG AAACACGCGC 51 CGATATGATT GTCAGCGCGT TTTTGCCTAT
GGTCAAAGCC GGCTTCGCGG 101 TCTCTCTGCC TTTGGCGGCA GCTTCTTTCG
TTATCGGTAT GATGATTGCG 151 GTAGCCGTGG CTTTGGTGCG GATTATGCCC
GCCGGCGGCA TCGTGCGGAA 201 AATCCTGCTG AAATTGGTGG AATTTTATAT
TTCCGTCATT CGCGGTACGC 251 CGCTGTTGGT TCAGCTTGTG ATTGTGTTTT
ACGGGCTGCC TTCCGTCGGC 301 ATCTATATCG ACCCGATTCC TGCCGCCATC
ATCGGCTTTT CGCTCAATGT 351 CGGCGCATAT GCTTCCGAAA CCATACGCGC
GGCAATTTTG TCCGTACCGA 401 AAGGCCAATG GGAAGCAGGT TTCTCCATCG
GCATGACCTA TATGCAGACG 451 TTCCGCCGCA TCGTCGCGCC GCAGGCATTT
CGCGTTGCCG TGCCGCCTTT 501 GAGCAACGAG TTTATCGGTT TGTTTAAAAA
CACCTCGCTC GCGGCAGTCG 551 TGACGGTAAC GGAATTATTC CGCGTCGCGC
AGGAAACGGC AAACCGCACT 601 TATGACTTTT TGCCCGTCTA TATCGAAGCC
GCTTTGGTTT ACTGGTGTTT 651 TTGTAAAGTG CTGTTCCTGA TTCAGGCGCG
TTTGGAAAAA CGTTTCGACC 701 GCTACGTCGC CAAATAA
This corresponds to the amino acid sequence <SEQ ID 2362; ORF
705.a>:
TABLE-US-02803 a705.pep 1 VFNNFLASLP FMTETRADMI VSAFLPMVKA
GFAVSLPLAA ASFVIGMMIA 51 VAVALVRIMP AGGIVRKILL KLVEFYISVI
RGTPLLVQLV IVFYGLPSVG 101 IYIDPIPAAI IGFSLNVGAY ASETIRAAIL
SVPKGQWEAG FSIGMTYMQT 151 FRRIVAPQAF RVAVPPLSNE FIGLFKNTSL
AAVVTVTELF RVAQETANRT 201 YDFLPVYIEA ALVYWCFCKV LFLIQARLEK
RFDRYVAK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 705
shows 100.0% identity over a 238 aa overlap with a predicted ORF
(ORF 705) from N. meningitidis:
TABLE-US-02804 a705/m705 100.0% identity in 238 aa overlap 10 20 30
40 50 60 a705.pep
VFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m705
VFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMP 10 20
30 40 50 60 70 80 90 100 110 120 a705.pep
AGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m705
AGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAY 70 80
90 100 110 120 130 140 150 160 170 180 a705.pep
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m705
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL 130
140 150 160 170 180 190 200 210 220 230 239 a705.pep
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAKX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m705
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAKX 190 200
210 220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2363>:
TABLE-US-02805 g706.seq 1 ATGAACTCCT CGCAACGCAA ACGCCTTTCC
GgccGCTGGC TCAACTCCTA 51 CGAACGCTac cGCCaccGCC GCCTCATACA
TGCCGTGCGG CTCGGCggaa 101 ccgtCCTGTT CGCCACCGCA CTCGCCCGgc
tACTCCACCT CCAacacggc 151 gAATGGATAG GGAtgaCCGT CTTCGTCGTC
CTCGGCATGC TCCAGTTCCA 201 AGGCgcgatt tActccaacg cggtgGAacg
taTGctcggt acggtcatcg 251 ggctgGGCGC GGGTTTGGgc gTTTTATGGC
TGAACCAGCA TTAtttccac 301 ggcaacCTcc tcttctacct gaccatcggc
acggcaagcg cactggccgg 351 ctGGGCGGCG GTCGGCAAAA acggctacgt
ccctatgctg GCGGGGctgA 401 CGATGTGCAT gctcatcggc gACAACGGCA
GCGAATGGCT CGACAGCGGC 451 CTGATGCGCG CGATGAACGT CCTCATCGGC
GCCGCCATCG CCATTGCCGC 501 CGCCAAACTG CTGCCGCTGA AATCCACACT
GATGTGGCGT TTCATGCTTG 551 CCGACAACCT GGCCGACTGC AGCAAAATGA
TTGCCGAAAT CAGCAACGGC 601 AGGCGTATGA CGCGCGAACG TTTGGAGCAG
AATATGGTCA AAATGCGCCA 651 AATCAACGCA CGCATGGTCA AAAGCCGCAG
CCACCTCGCC GCCACATCGG 701 GCGAAAGCCG CATCAGCCCC TCCATGATGG
AAGCCATGCA GCACGCCCAC 751 CGCAAAATCG TCAACACCAC CGAGCTGCTC
CTGACCACCG CCGCCAAGCT 801 GCAATCTCCC AAACTCAACG GCAGCGAAAT
CCGGCTGCTC GACCGCCACT 851 TCACACTGCT CCAAACCGAC CTGCAACAAA
CCGCCGCCCT CATCAACGGC 901 AGACACGCCC GCCGCATCCG CATCGACACC
GCCATCAACC CCGAACTGGA 951 AGCCCTCGCC GAACACCTCC ACTACCAATG
GCAGGGCTTC CTCTGGCTCA 1001 GCACCAATAT GCGTCAGGAA ATTTCCGCCC
TCGTCATCCT GCTGCAACGC 1051 ACCCGCCGCA AATGGCTGGA TGCCCACGAA
CGCCAACACC TGCGCCAAAG 1101 CCTGCTTGAA ACACGGGAAC ACGGCTGA
This corresponds to the amino acid sequence <SEQ ID 2364; ORF
706.ng>:
TABLE-US-02806 g706.pep 1 MNSSQRKRLS GRWLNSYERY RHRRLIHAVR
LGGTVLFATA LARLLHLQHG 51 EWIGMTVFVV LGMLQFQGAI YSNAVERMLG
TVIGLGAGLG VLWLNQHYFH 101 GNLLFYLTIG TASALAGWAA VGKNGYVPML
AGLTMCMLIG DNGSEWLDSG 151 LMRAMNVLIG AAIAIAAAKL LPLKSTLMWR
FMLADNLADC SKMIAEISNG 201 RRMTRERLEQ NMVKMRQINA RMVKSRSHLA
ATSGESRISP SMMEAMQHAH 251 RKIVNTTELL LTTAAKLQSP KLNGSEIRLL
DRHFTLLQTD LQQTAALING 301 RHARRIRIDT AINPELEALA EHLHYQWQGF
LWLSTNMRQE ISALVILLQR 351 TRRKWLDAHE RQHLRQSLLE TREHG*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2365>:
TABLE-US-02807 m706.seq 1 ATGAACACCT CGCAACGCAA CCGCCTCGTC
AGCCGCTGGC TCAACTCCTA 51 CGAACGCTAC CGCTACCGCC GCCTCATCCA
CGCCGTCCGG CTCGGCGGGG 101 CCGTCCTGTT CGCCACCGCC TCCGCCCGGC
TGCTCCACCT CCAACACGGC 151 GAGTGGATAG GGATGACCGT CTTCGTCGTC
CTCGGCATGC TCCAGTTTCA 201 AGGGGCGATT TACTCCAAGG CGGTGGAACG
TATGCTCGGC ACGGTCATCG 251 GGCTGGGCGC GGGTTTGGGC GTTTTATGGC
TGAACCAGCA TTATTTCCAC 301 GGCAACCTCC TCTTCTACCT CACCGTCGGC
ACGGCAAGCG CACTGGCCGG 351 CTGGGCGGCG GTCGGCAAAA ACGGCTACGT
CCCTATGCTG GCAGGGCTGA 401 CGATGTGTAT GCTCATCGGC GACAACGGCA
GCGAATGGCT CGACAGCGGA 451 CTCATGCGCG CCATGAACGT CCTCATCGGC
GCGGCCATCG CCATCGCCGC 501 CGCCAAACTG CTGCCGCTGA AATCCACACT
GATGTGGCGT TTCATGCTTG 551 CCGACAACCT GGCCGACTGC AGCAAAATGA
TTGCCGAAAT CAGCAACGGC 601 AGGCGCATGA CCCGCGAACG CCTCGAGGAG
AACATGGCGA AAATGCGCCA 651 AATCAACGCA CGCATGGTCA AAAGCCGCAG
CCATCTCGCC GCCACATCGG 701 GCGAAAGCCG CATCAGCCCC GCCATGATGG
AAGCCATGCA GCACGCCCAC 751 CGTAAAATCG TCAACACCAC CGAGCTGCTC
CTGACCACCG CCGCCAAGCT 801 GCAATCTCCC AAACTCAACG GCAGCGAAAT
CCGGCTGCTT GACCGCCACT 851 TCACACTGCT CCAAACCGAC CTGCAACAAA
CCGTCGCCCT TATCAACGGC 901 AGACACGCCC GCCGCATCCG CATCGACACC
GCCATCAACC CCGAACTGGA 951 AGCCCTCGCC GAACACCTCC ACTACCAATG
GCAGGGCTTC CTCTGGCTCA 1001 GCACCAATAT GCGTCAGGAA ATTTCCGCCC
TCGTCATCCT GCTGCAACGC 1051 ACCCGCCGCA AATGGCTGGA TGCCCACGAA
CGCCAACACC TGCGCCAAAG 1101 CCTGCTTGAA ACACGGGAAC ACGGCTGA
This corresponds to the amino acid sequence <SEQ ID 2366; ORF
706>:
TABLE-US-02808 m706.pep 1 MNTSQRNRLV SRWLNSYERY RYRRLIHAVR
LGGAVLFATA SARLLHLQHG 51 EWIGMTVFVV LGMLQFQGAI YSKAVERMLG
TVIGLGAGLG VLWLNQHYFH 101 GNLLFYLTVG TASALAGWAA VGKNGYVPML
AGLTMCMLIG DNGSEWLDSG 151 LMRAMNVLIG AAIAIAAAKL LPLKSTLMWR
FMLADNLADC SKMIAEISNG 201 RRMTRERLEE NMAKMRQINA RMVKSRSHLA
ATSGESRISP AMMEAMQHAH 251 RKIVNTTELL LTTAAKLQSP KLNGSEIRLL
DRHFTLLQTD LQQTVALING 301 RHARRIRIDT AINPELEALA EHLHYQWQGF
LWLSTNMRQE ISALVILLQR 351 TRRKWLDAHE RQHLRQSLLE TREHG* m706/g706
96.5% identity in 375 aa overlap 10 20 30 40 50 60 m706.pep
MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARLLHLQHGEWIGMTVFVV
||:|||:|| :||||||||||:|||||||||||:|||||| ||||||||||||||||||| g706
MNSSQRKRLSGRWLNSYERYRHRRLIHAVRLGGTVLFATALARLLHLQHGEWIGMTVFVV 10 20
30 40 50 60 70 80 90 100 110 120 m706.pep
LGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGNLLFYLTVGLASALAGWAA
||||||||||||:|||||||||||||||||||||||||||||||||||:||||||||||| g706
LGMLQFQGAIYSNAVERMLGTVIGLGAGLGVLWLNQHYFHGNLLFYLTIGTASALAGWAA 70 80
90 100 110 120 130 140 150 160 170 180 m706.pep
VGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIGAAIAIAAAKLLPLKSTLMWR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g706
VGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIGAAIAIAAAKLLPLKSTLMWR 130
140 150 160 170 180 190 200 210 220 230 240 m706.pep
FMLADNLADCSKMIAEISNGRRMTRERLEENMAKMRQINARMVKSRSHLAATSGESRISP
|||||||||||||||||||||||||||||:||:||||||||||||||||||||||||||| g706
FMLADNLADCSKMIAEISNGRRMTRERLEQNMVKMRQINARMVKSRSHLAATSGESRISP 190
200 210 220 230 240 250 260 270 280 290 300 m706.pep
AMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSEIRLLDRHFTLLQTDLQQTVALING
:|||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| g706
SMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSEIRLLDRHFTLLQTDLQQTAALING 250
260 270 280 290 300 310 320 330 340 350 360 m706.pep
RHARRIRIDTAINPELEALAEHLHYQWQGFLWLSTNMRQEISALVILLQRTRRKWLDAHE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g706
RHARRIRIDTAINPELEALAEHLHYQWQGFLWLSTNMRQEISALVILLQRTRRKWLDAHE 310
320 330 340 350 360 370 m706.pep RQHLRQSLLETREHGX ||||||||||||||||
g706 RQHLRQSLLETREHGX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2367>:
TABLE-US-02809 a706.seq 1 ATGAACACCT CGCAACGCAA CCGCCTCGTC
AGCCGCTGGC TCAACTCCTA 51 CGAACGCTAC CGCTACCGCC GCCTCATCCA
CGCCGTCCGG CTCGGCGGGG 101 CCGTCCTGTT CGCCACCGCC TCCGCCCGGC
TGCTCCACCT CCAACACGGC 151 GAGTGGATAG GGATGACCGT CTTCGTCGTC
CTCGGCATGC TCCAGTTTCA 201 AGGGGCGATT TACTCCAAGG CGGTGGAACG
TATGCTCGGC ACGGTCATCG 251 GGCTGGGCGC GGGTTTGGGC GTTTTATGGC
TGAACCAGCA TTATTTCCAC 301 GGCAACCTCC TCTTCTACCT CACCGTCGGC
ACGGCAAGCG CACTGGCCGG 351 CTGGGCGGCG GTCGGCAAAA ACGGCTACGT
CCCTATGCTG GCGGGGCTGA 401 CGATGTGCAT GCTCATCGGC GACAACGGCA
GCGAATGGTT CGACAGCGGC 451 CTGATGCGCG CGATGAACGT CCTCATCGGC
GCGGCCATCG CCATCGCCGC 501 CGCCAAACTG CTGCCGCTGA AATCCACACT
GATGTGGCGT TTCATGCTTG 551 CCGACAACCT GACCGACTGC AGCAAAATGA
TTGCCGAAAT CAGCAACGGC 601 AGGCGCATGA CCCGCGAACG CCTCGAAGAG
AACATGGCGA AAATGCGCCA 651 AATCAACGCA CGCATGGTCA AAAGCCGCAG
CCACCTCGCC GCCACATCGG 701 GCGAAAGCCG CATCAGCCCC GCCATGATGG
AAGCCATGCA GCACGCCCAC 751 CGTAAAATTG TCAACACCAC CGAGCTGCTC
CTGACCACCG CCGCCAAGCT 801 GCAATCTCCC AAACTCAACG GCAGCGAAAT
CCGGCTGCTT GACCGCCACT 851 TCACACTGCT CCAAACCGAC CTGCAACAAA
CCGTCGCCCT TATCAACGGC 901 AGACACGCCC GCCGCATCCG CATCGACACC
GCCATCAACC CCGAACTGGA 951 AGCCCTCGCC GAACACCTCC ACTACCAATG
GCAGGGCTTC CTCTGGCTCA 1001 GCACCAATAT GCGTCAGGAA ATTTCCGCCC
TCGTCATCCT GCTGCAACGC 1051 ACCCGCCGCA AATGGCTGGA TGCCCACGAA
CGCCAACACC TGCGCCAAAG 1101 CCTGCTTGAA ACACGGGAAC ACAGTTGA
This corresponds to the amino acid sequence <SEQ ID 2368; ORF
706.a>:
TABLE-US-02810 a706.pep 1 MNTSQRNRLV SRWLNSYERY RYRRLIHAVR
LGGAVLFATA SARLLHLQHG 51 EWIGMTVFVV LGMLQFQGAI YSKAVERMLG
TVIGLGAGLG VLWLNQHYFH 101 GNLLFYLTVG TASALAGWAA VGKNGYVPML
AGLTMCMLIG DNGSEWFDSG 151 LMRAMNVLIG AAIAIAAAKL LPLKSTLMWR
FMLADNLTDC SKMIAEISNG 201 RRMTRERLEE NMAKMRQINA RMVKSRSHLA
ATSGESRISP AMMEAMQHAH 251 RKIVNTTELL LTTAAKLQSP KLNGSEIRLL
DRHFTLLQTD LQQTVALING 301 RHARRIRIDT AINPELEALA EHLHYQWQGF
LWLSTNMRQE ISALVILLQR 351 TRRKWLDAHE RQHLRQSLLE TREHS* a706/m706
99.5% identity in 374 aa overlap 10 20 30 40 50 60 a706.pep
MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARLLHLQHGEWIGMTVFVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m706
MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARLLHLQHGEWIGMTVFVV 10 20
30 40 50 60 70 80 90 100 110 120 a706.pep
LGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGNLLFYLTVGTASALAGWAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m706
LGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGNLLFYLTVGTASALAGWAA 70 80
90 100 110 120 130 140 150 160 170 180 a706.pep
VGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIGAAIAIAAAKLLPLKSTLMWR
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| m706
VGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIGAAIAIAAAKLLPLKSTLMWR 130
140 150 160 170 180 190 200 210 220 230 240 a706.pep
FMLADNLTDCSKMIAEISNGRRMTRERLEENMAKMRQINARMVKSRSHLAATSGESRISP
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| m706
FMLADNLADCSKMIAEISNGRRMTRERLEENMAKMRQINARMVKSRSHLAATSGESRISP 190
200 210 220 230 240 250 260 270 280 290 300 a706.pep
AMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSEIRLLDRHFTLLQTDLQQTVALING
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| m706
AMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSEIRLLDRHFTLLQTDLQQTVALING 250
260 270 280 290 300 310 320 330 340 350 360 a706.pep
RHARRIRIDTAINPELEALAEHLHYQWQGFLWLSTNMRQEISALVILLQRTRRKWLDAHE
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| m706
RHARRIRIDTAINPELEALAEHLHYQWQGFLWLSTNMRQEISALVILLQRTRRKWLDAHE 310
320 330 340 350 360 370 a706.pep RQHLRQSLLETREHSX ||||||||||||||:
m706 RQHLRQSLLETREHGX 370
[0333] g707.seq not found
[0334] g707.pep not found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2369>:
TABLE-US-02811 m707.seq 1 ATGGAAATTA TTAACGATGC AGAACTTATC
CGTTCCATGC AGCGTCAGCA 51 GCACATAGAT GCTGAATTGT TAACTGATGC
AAATGTCCGT TTCGAGCAAC 101 CATTGGAGAA GAACAATTAT GTCCTGAGTG
AAGATGAAAC ACCGTGTACT 151 CGGGTAAATT ACATTAGTTT AGATGATAAG
ACGGTGCGCA AATTTTCTTT 201 TCTTCCTTCT GTGCTCATGA AAGAAACAGC
TTTTAAAACT GGGATGTGTT 251 TAGGTTCCAA TAATTTGAGC AGGCTACAAA
AAGCCGCGCA ACAGATACTG 301 ATCGTGCGTG GCTACCTCAC TTCCCAAGCT
ATTATCCAAC CACAGAATAT 351 GGATTCGGGA ATTCTGAAAT TACGGGTATC
AGCAGGCGAA ATAGGGGATA 401 TCCGCTATGA AGAAAAACGG GATGGGAAGT
CTGCCGAGGG CAGTATTAGT 451 GCATTCAATA ACAAATTTCC CTTATATAGG
AACAAAATTC TCAATCTTCG 501 CGATGTAGAG CAGGGCTTGG AAAACCTGCG
TCGTTTGCCG AGTGTTAAAA 551 CAGATATTCA GATTATACCG TCCGAAGAAG
AAGGCAAAAG CGATTTACAG 601 ATCAAATGGC AGCAGAATAA ACCCATACGG
TTCAGTATCG GTATAGATGA 651 TGCGGGCGGC AAAACGACCG GCAAATATCA
AGGAAATGTC GCTTTATCGT 701 TCGATAACCC TTTGGGCTTA AGCGATTTGT
TTTATGTTTC ATATGGACGC 751 GGTTTGGCGC ACAAAACGGA CTTGACTGAT
GCCACCGGTA CGGAAACTGA 801 AAGCGGATCC AGAAGTTACA GCGTGCATTA
TTCGGTGCCC GTAAAAAAAT 851 GGCTGTTTTC TTTTAATCAC AATGGACATC
GTTACCACGA AGCAACCGAA 901 GGCTATTCCG TCAATTACGA TTACAACGGC
AAACAATATC AGAGCAGCCT 951 GGCCGCCGAG CGCATGCTTT GGCGTAACAG
ACTTCATAAA ACTTCAGTCG 1001 GAATGAAATT ATGGACACGC CAAACCTATA
AATACATCGA CGATGCCGAA 1051 ATCGAAGTAC AACGCCGCCG CTCTGCAGGC
TGGGAAGCCG AATTGCGCCA 1101 CCGTGCTTAC CTCAACCGTT GGCAGCTTGA
CGGCAAGTTG TCTTACAAAC 1151 GCGGGACCGG CATGCGCCAA AGTATGCCTG
CACCGGAAGA AAACGGCGGC 1201 GATATTCTTC CAGGTACATC TCGTATGAAA
ATCATTACTG CCAGTTTGGA 1251 CGCAGCCGCC CCATTTATTT TAGGCAAACA
GCAGTTTTTC TACGCAACCG 1301 CCATTCAAGC TCAATGGAAC AAAACGCCGT
TGGTTGCCCA AGATAAATTG 1351 TCAATCGGCA GCCGCTACAC CGTTCGCGGA
TTTGATGGGG AGCAGAGTCT 1401 TTTCGGAGAG CGAGGTTTCT ACTGGCAGAA
TACTTTAACT TGGTATTTTC 1451 ATCCGAACCA TCAGTTCTAT CTCGGTGCGG
ACTATGGCCG CGTATCTGGC 1501 GAAAGTGCAC AATATGTATC GGGCAAGCAG
CTGATGGGTG CAGTGGTCGG 1551 CTTCAGAGGA GGGCATAAAG TAGGCGGTAT
GTTTGCTTAT GATCTGTTTG 1601 CCGGCAAGCC GCTTCATAAA CCCAAAGGCT
TTCAGACGAC CAACACCGTT 1651 TACGGCTTCA ACTTGAATTA CAGTTTCTAA
This corresponds to the amino acid sequence <SEQ ID 2370; ORF
707>:
TABLE-US-02812 m707.pep 1 MEIINDAELI RSMQRQQHID AELLTDANVR
FEQPLEKNNY VLSEDETPCT 51 RVNYISLDDK TVRKFSFLPS VLMKETAFKT
GMCLGSNNLS RLQKAAQQIL 101 IVRGYLTSQA IIQPQNMDSG ILKLRVSAGE
IGDIRYEEKR DGKSAEGSIS 151 AFNNKFPLYR NKILNLRDVE QGLENLRRLP
SVKTDIQIIP SEEEGKSDLQ 201 IKWQQNKPIR FSIGIDDAGG KTTGKYQGNV
ALSFDNPLGL SDLFYVSYGR 251 GLAHKTDLTD ATGTETESGS RSYSVHYSVP
VKKWLFSFNH NGHRYHEATE 301 GYSVNYDYNG KQYQSSLAAE RMLWRNRLHK
TSVGMKLWTR QTYKYIDDAE 351 IEVQRRRSAG WEAELRHRAY LNRWQLDGKL
SYKRGTGMRQ SMPAPEENGG 401 DILPGTSRMK IITASLDAAA PFILGKQQFF
YATAIQAQWN KTPLVAQDKL 451 SIGSRYTVRG FDGEQSLFGE RGFYWQNTLT
WYFHPNHQFY LGADYGRVSG 501 ESAQYVSGKQ LMGAVVGFRG GHKVGGMFAY
DLFAGKPLHK PKGFQTTNTV 551 YGFNLNYSF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2371>:
TABLE-US-02813 a707.seq 1 NTGAAAGAAA CAGCTTTTAA AACTGGGATG
TGTTTAGGTT CCAATAATTT 51 GAGCAGGCTA CAAAAAGCCG CGCAACAGAT
ACTGATTGTG CGTGGCTACC 101 TCACTTCCCA AGCTATTATC CAACCACAGA
ATATGGATTC GGGAATTCTG 151 AAATTACGGG TATCAGCAGG CGAAATAGGN
GATATCCGCT ATGAAGAAAA 201 ACGGGATGNG AAGTCTGCCG AGGGCAGTAT
TAGTGCATTC AATAACAAAN 251 TTCCCTTATA TAGGAACAAA ATTCTCAATC
TTCGCGATGT AGAGCAGGGC 301 TTGGAAAACC TGCGTCGTTT GCCGAGTGTT
AAAACAGATA TTCAGATTAT 351 ACCGTCCGAA GAAGAAGGCA AAAGCGATTT
ACAGATCAAA TGGCAGCAGA 401 ATAAACCCAT ACGGTTCAGT ATCGGTATAG
ATGATGCGGG CGGCAAAACG 451 ACCGGCAAAT ATCAAGGAAA TGTCGCTTTA
TCGTNCGATA ACCCTTTGGG 501 NTTAAGCGAT TNGTTTTATG TTTCATATGG
ACGCGGTTTG GTGCACAAAA 551 CGGACTTGAC TGNTGCCACC GGTACGGAAA
CTGAAAGCGG ATCCAGAAGT 601 TACAGCGTGC ATTATTCGGT GNNCGTAAAA
AAATGGCTGT TTTCTTTTAA 651 TCACAATGGA CATCGTTACC ACGAAGCAAC
CGAAGGCTAT TCCGTCAATT 701 ACGATTACAA CGGCAAACAA TATCAGAGCA
GCCTGGCCGC CGAGCGCATG 751 CTTTGGNNNN NNAGNTTTCN TNAAACTTCA
GTCNGAATGA AATTATGGAC 801 ACGCCAAACC TATAAATACA TCGACGATGC
CGAAATCGAA GTGCAACGCC 851 GCCGCTCTGC AGGCTGGGAA GCCGAATTGC
GCCACCGTGC TTACCTCNAC 901 CGTTGGCAGC TTGACGGCAA GTTGTCTTAC
AAACGCGGGA CCGGCATGCG 951 CCAAAGTATG CCCGCACCTG AAGAAAACGG
CGGCGGTACT ATTCCAGNCA 1001 NATCCCGTAT GAAAATCATA ACCGCCGGAT
TGGATGCAGC GGCCCCGTNT 1051 ATGTTGGGCA AACAGCAGTT TTTCTACGCA
ACCGCCATTC AAGCTCAATG 1101 GAACAAAACG CCTTTGGTTG CCCAAGACAA
GTTGTCTATC GGCAGCCGCT 1151 ACACCGTTCG CGGATTTGAT GGGGAGCAGA
GTCTTTTCGG AGAGCGAGGT 1201 TTCTACTGGC AGAATACTTT AACTTGGTAT
TTTCATCCGA ACCATCAGTT 1251 CTATCTCGGT GCGGACTATG GCCGCGTATC
TGGCGAAAGT GCACAATATG 1301 TATCGGGCAA GCAGCTGATG GGTGCAGTGG
TCGGCTTCAG AGGAGGGCAT 1351 AAAGTAGGCG GTATGTTTGC TTATGATCTG
TTTGCCGGCA AGCCGCTTCA 1401 TAAACCCAAA GGCTTTCAGA CGACCAACAC
CGTTTACGGC TTCAACTTGA 1451 ATTACAGTTT CTAA
This corresponds to the amino acid sequence <SEQ ID 2372; ORF
707.a>:
TABLE-US-02814 a707.pep 1 XKETAFKTGM CLGSNNLSRL QKAAQQILIV
RGYLTSQAII QPQNMDSGIL 51 KLRVSAGEIG DIRYEEKRDX KSAEGSISAF
NNKXPLYRNK ILNLRDVEQG 101 LENLRRLPSV KTDIQIIPSE EEGKSDLQIK
WQQNKPIRFS IGIDDAGGKT 151 TGKYQGNVAL SXDNPLGLSD XFYVSYGRGL
VHKTDLTXAT GTETESGSRS 201 YSVHYSVXVK KWLFSFNHNG HRYHEATEGY
SVNYDYNGKQ YQSSLAAERM 251 LWXXXFXXTS VXMKLWTRQT YKYIDDAEIE
VQRRRSAGWE AELRHRAYLX 301 RWQLDGKLSY KRGTGMRQSM PAPEENGGGT
IPXXSRMKII TAGLDAAAPX 351 MLGKQQFFYA TAIQAQWNKT PLVAQDKLSI
GSRYTVRGFD GEQSLFGERG 401 FYWQNTLTWY FHPNHQFYLG ADYGRVSGES
AQYVSGKQLM GAVVGFRGGH 451 KVGGMFAYDL FAGKPLHKPK GFQTTNTVYG FNLNYSF*
a707/m707 95.3% identity in 486 aa overlap 10 20 30 a707.pep
XKETAFKTGMCLGSNNLSRLQKAAQQILIVR |||||||||||||||||||||||||||||| m707
EDETPCTRVNYISLDDKTVRKFSFLPSVLMKETAFKTGMCLGSNNLSRLQKAAQQILIVR 50 60
70 80 90 100 40 50 60 70 80 90 a707.pep
GYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEKRDXKSAEGSISAFNNKXPLYRNKI
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| m707
GYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEKRDGKSAEGSISAFNNKFPLYRNKI 110
120 130 140 150 160 100 110 120 130 140 150 a707.pep
LNLRDVEQGLENLRRLPSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDAGGKTT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m707
LNLRDVEQGLENLRRLPSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDAGGKTT 170
180 190 200 210 220 160 170 180 190 200 210 a707.pep
GKYQGNVALSXDNPLGLSDXFYVSYGRGLVHKTDLTXATGTETESGSRSYSVHYSVXVKK
|||||||||| |||||||| |||||||||:|||||| ||||||||||||||||||| ||| m707
GKYQGNVALSFDNPLGLSDLFYVSYGRGLAHKTDLTDATGTETESGSRSYSVHYSVPVKK 230
240 250 260 270 280 220 230 240 250 260 270 a707.pep
WLFSFNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWXXXFXXTSVXMKLWTRQTY
||||||||||||||||||||||||||||||||||||||||| : ||| ||||||||| m707
WLFSFNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWRNRLHKTSVGMKLWTRQTY 290
300 310 320 330 340 280 290 300 310 320 330 a707.pep
KYIDDAEIEVQRRRSAGWEAELRHRAYLXRWQLDGKLSYKRGTGMRQSMPAPEENGGGTI
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| : m707
KYIDDAEIEVQRRRSAGWEAELRHRAYLNRWQLDGKLSYKRGTGMRQSMPAPEENGGDIL 350
360 370 380 390 400 340 350 360 370 380 390 a707.pep
PXXSRMKIITAGLDAAAPXMLGKQQFFYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDG |
:||||||||:|||||| :|||||||||||||||||||||||||||||||||||||||| m707
PGTSRMKIITASLDAAAPFILGKQQFFYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDG 410
420 430 440 450 460 400 410 420 430 440 450 a707.pep
EQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSGKQLMGAVVGFRGGHK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m707
EQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSGKQLMGAVVGFRGGHK 470
480 490 500 510 520 460 470 480 a707.pep
VGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSFX
||||||||||||||||||||||||||||||||||||| m707
VGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSFX 530 540 550 560
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2373>:
TABLE-US-02815 g708.seq 1 ATGCCTTTTA AGCCATCCAA ACGAATCTCT
TTATTACTTG TTCTTGCCTT 51 GGGCGCGTGC AGCACTTCCT ACCGCCCCTC
GCGGGCAGAA AAAGCCAATC 101 AGGTTTCCAA TATCAAAACC CAGTTGGCGA
TGGAATATAT GCGCGGTCAG 151 GACTACCGTC AGGCAACGGC AAGTATTGAA
GATGCCTTGA AATCGAACCC 201 TAAAAACGAA CTTGCCTGGC TGGTCCGTGC
CGAAATCTAT CAATACCTGA 251 AAGTTAACGA CAAGGCGCAG GAAAGTTTCC
GGCAAGCCCT CTCCATCAAA 301 CCCGACAGTG CCGAAATCAA CAACAACTAC
GGCTGGTTCC TGTGCGGCAG 351 GCTCAACCGC CCTGCCGAAT CTATGGCATA
TTTCGACAAA GCCCTGGCCG 401 ACCCCACCTA CCCGACCCCT TATATTGCCA
ACCTGAATAA AGGTATATGC 451 AGCGCAAAAC AGGGGCAATT CGGATTGGCG
GAAGCCTATT TGAAACGTTC 501 CCTCGCCGCC CAGCCGCAGT TCCCACCCGC
ATTTAAAGAA CTGGCGCGCA 551 CCAAAATGCT GGCCGGGCAG TTGGGCGATG
CCGATTACTA CTTTAAAAAA 601 TACCAAAGCA GGGTAGAAGT CCTTCAGGCC
GATGATTTGC TGCTAGGCTG 651 GAAAATTGCC AAAGCCCTCG GCAACGTGCA
GGCGGCATAC GAATATGAAG 701 CACAATTGCA GGCAAATTTC CCCTACTCGG
AAGAATTGCA AACCGTCCTC 751 ACCGGTCAAT AA
This corresponds to the amino acid sequence <SEQ ID 2374; ORF
708.ng>:
TABLE-US-02816 g708.pep 1 MPFKPSKRIS LLLVLALGAC STSYRPSRAE
KANQVSNIKT QLAMEYMRGQ 51 DYRQATASIE DALKSNPKNE LAWLVRAEIY
QYLKVNDKAQ ESFRQALSIK 101 PDSAEINNNY GWFLCGRLNR PAESMAYFDK
ALADPTYPTP YIANLNKGIC 151 SAKQGQFGLA EAYLKRSLAA QPQFPPAFKE
LARTKMLAGQ LGDADYYFKK 201 YQSRVEVLQA DDLLLGWKIA KALGNVQAAY
EYEAQLQANF PYSEELQTVL 251 TGQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2375>:
TABLE-US-02817 m708.seq 1 ATGCCTTTTA AGCCATCCAA ACGAATCTCT
TTATTACTCG TTCTTGCCTT 51 GGGCGCGTGC AGCACTTCCT ACCGCCCCTC
GCGGGCAGAA AAAGCCAATC 101 AGGTTTCCAA TATCAAAACC CAGTTGGCAA
TGGAATATAT GCGCGGTCAG 151 GACTACCGTC AGGCGACGGC AAGTATTGAA
GACGCCCTGA AATCGGACCC 201 TAAAAACGAG CTTGCCTGGC TGGTCCGTGC
CGAAATCTAT CAATACCTGA 251 AAGTTAACGA CAAGGCGCAG GAAAGTTTCC
GGCAAGCCCT CTCCATCAAA 301 CCCGACAGTG CCGAAATCAA CAACAACTAC
GGTTGGTTCC TATGCGGCAG 351 GCTCAACCGC CCTGCCGAAT CTATGGCATA
TTTCGACAAA GCTCTGGCCG 401 ACCCCACCTA CCCGACCCCT TATATTGCCA
ACCTGAATAA AGGCATATGC 451 AGCGCAAAAC AGGGGCAATT CGGATTGGCG
GAAGCCTATT TGAAACGTTC 501 CCTCGCCGCC CAGCCGCAGT TCCCACCCGC
ATTTAAAGAA CTGGCGCGCA 551 CCAAAATGCT GGCCGGGCAG TTGGGCGATG
CCGATTACTA CTTTAAAAAA 601 TACCAAAGCA GGGTAGAAGT CCTTCAGGCC
GATGATTTGC TGCTAGGCTG 651 GAAAATTGCC AAAGCCCTCG GCAACGCACA
GGCGGCATAC GAATATGAAG 701 CACAATTGCA GGCGAATTTC CCCTACTCGG
AAGAATTGCA AACCGTCCTC 751 ACCGGTCAAT AA
This corresponds to the amino acid sequence <SEQ ID 2376; ORF
708>:
TABLE-US-02818 m708.pep 1 MPFKPSKRIS LLLVLALGAC STSYRPSRAE
KANQVSNIKT QLAMEYMRGQ 51 DYRQATASIE DALKSDPKNE LAWLVRAEIY
QYLKVNDKAQ ESFRQALSIK 101 PDSAEINNNY GWFLCGRLNR PAESMAYFDK
ALADPTYPTP YIANLNKGIC 151 SAKQGQFGLA EAYLKRSLAA QPQFPPAFKE
LARTKMLAGQ LGDADYYFKK 201 YQSRVEVLQA DDLLLGWKIA KALGNAQAAY
EYEAQLQANF PYSEELQTVL 251 TGQ* m708/g708 99.2% identity in 253 aa
overlap 10 20 30 40 50 60 m708.pep
MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAMEYMRGQDYRQATASIE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g708
MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAMEYMRGQDYRQATASIE 10 20
30 40 50 60 70 80 90 100 110 120 m708.pep
DALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| g708
DALKSNPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR 70 80
90 100 110 120 130 140 150 160 170 180 m708.pep
PAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g708
PAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE 130
140 150 160 170 180 190 200 210 220 230 240 m708.pep
LARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANF
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| g708
LARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNVQAAYEYEAQLQANF 190
200 210 220 230 240 250 m708.pep PYSEELQTVLTGQX |||||||||||||| g708
PYSEELQTVLTGQX 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2377>:
TABLE-US-02819 a708.seq 1 ATGCCTTTTA AGCCATCCAA ACGAATCTCT
TTATTACTTG TCCTTGCCTT 51 GGGCGCGTGC AGCACTTCCT ACCGCCCCTC
GCGGGCAGAA AAAGCCAATC 101 AGGTTTCCAA TATCAAAACC CAGTTGGCAA
TGGAATATAT GCGCGGTCAG 151 GACTACCGTC AGGNGACGGC AAGTATTGAA
GACGCCTTGA AATCAGACCC 201 TAAAAACGAG CTTGCCTGGC TGGTCCGTGC
CGAAATCTAT CAATACCTGA 251 AAGTTAACGA CAAGGCGCAG GAAAGTTTCC
GGCAAGNCCT CTCCATCAAA 301 CCCGACAGTG CCGAAATCAA CAACAACTAC
NGCTGGTTCC TGTGCGGCAG 351 GCTCAACCGC CCTGCCGAAT CTATGGCATA
TTTCGACAAA GCCCTGGCCG 401 ACCCCACNTA CCCGANCCCT TATATTGCCA
ACCTGAATAA AGGCATATGC 451 AGCGCAAAAC AGGGGCAATT CGGATTGGCG
GAAGCCTATT TGAAACGTTC 501 CCTCGCCGCC CAGCCGCAGT TCCCACCCGC
ATTTAAAGAA CTGGCGCGCA 551 CCAAAATGCT GGCCGGGCAG TTGGGCGATG
CCGATTACTA CTTTAAAAAA 601 TACCAAAGCA GGGTAGAAGT CCTTCAGGCC
GATGATTTGC TGCTAGGCTG 651 GAAAATTGCC AAAGCCCTCG GCAACGCACA
GGCGGCATAC GAATATGAAG 701 CACAATTGCA GGCGAATTTC CCCTACTCGG
AAGAATTGCA AACCGTCCTC 751 ATCGGTCAAT AA
This corresponds to the amino acid sequence <SEQ ID 2378; ORF
708.a>:
TABLE-US-02820 a708.pep 1 MPFKPSKRIS LLLVLALGAC STSYRPSRAE
KANQVSNIKT QLAMEYMRGQ 51 DYRQXTASIE DALKSDPKNE LAWLVRAEIY
QYLKVNDKAQ ESFRQXLSIK 101 PDSAEINNNY XWFLCGRLNR PAESMAYFDK
ALADPTYPXP YIANLNKGIC 151 SAKQGQFGLA EAYLKRSLAA QPQFPPAFKE
LARTKMLAGQ LGDADYYFKK 201 YQSRVEVLQA DDLLLGWKIA KALGNAQAAY
EYEAQLQANF PYSEELQTVL 251 IGQ* a708/m708 98.0% identity in 253 aa
overlap 10 20 30 40 50 60 a708.pep
MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAMEYMRGQDYRQXTASIE
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| m708
MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAMEYMRGQDYRQATASIE 10 20
30 40 50 60 70 80 90 100 110 120 a708.pep
DALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQXLSIKPDSAEINNNYXWFLCGRLNR
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| m708
DALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR 70 80
90 100 110 120 130 140 150 160 170 180 a708.pep
PAESMAYFDKALADPTYPXPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| m708
PAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE 130
140 150 160 170 180 190 200 210 220 230 240 a708.pep
LARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m708
LARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANF 190
200 210 220 230 240 250 a708.pep PYSEELQTVLIGQX |||||||||| ||| m708
PYSEELQTVLTGQX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2379>:
TABLE-US-02821 g709.seq 1 ATGTTTGCTT TCAAATCCTT ACTCGATATG
CCGCGCGGTG AGGCACTTGC 51 CGTCGTCGTC GCTCTGATTG CCGCAATGGG
CTATACCATC ATTTCATTGG 101 AGTGGCTGCC GCATATGTCC ATTATTGCCG
CCATCGTCGT GCTGATTTTG 151 TACGGCTTGG CGCGCGGTTT GAAATACAAC
GATATGCAGG CAGGGATGAT 201 AGGCGCGTTG AATCAGGGTA TGGGCGCGGT
TTACCTGTTT TTCTTCATCG 251 GGCTGATGGT CAGCGCGCTG ATGATGAGCG
GCGCGATTCC GACGCTGATG 301 TATTACGGTT TCGGGCTGAT TTCCCCGACT
TATTTTTATT TTTCCGCCTT 351 CGCGCTGTGT TCCGTCATCG GCGTGTCCAT
CGGCAGCAGC CTGACCGCCT 401 GCGCCACTGT CGGCGTTGCC TTTATGGGGA
TGGCGGCGGC GTTTCAGGCC 451 GATATGGCGA TGACGgcggg cgcgattgTT
tccggTGTGT TTTTCGGCGA 501 TAAAATGTCC CCGCTTTCCG ACACCACGGG
CATTTCCGCG TCCATCGTCG 551 GTATCGACCT GTTTGAACAC ATCAAAAACA
TGATGTACAC CACCATCCCT 601 GCGTGGCTTA TCAGCGCGGC ACTGATGCTT
TGGCTTCTTC CCAGCGTCGC 651 CGCGCAGGAT TTGAACAGCG TCGAATCCTT
CCGCAGCCAG CTTGAAGCCA 701 CGGGATTGGT GCACGGCTAT TCGCTGATTC
CGTTTGCACT GTTGGTCGTT 751 TTGGCATTGA TGCGCGTCAA TGCCGTGGTC
GCCATGCTCT TTACCGTCAT 801 TGCCGCCGTT GCCGTAACGT ATCTGCACAG
CACGCCCGAT CTGCGTCAGC 851 TCGGCGCGTG GTTTTATGGC GGCTACAAAC
TCGAAGGCGA AGCGTTTAAA 901 GACATTGCCA AACTGATTTC GCGCGGCGGC
TTGGAGAGTA TGTTCTTTAC 951 GCAGACCATC GTTATCCTCG GTATGAGTTT
GGGCGGGCTG CTGTTTGCGC 1001 TCGGTGTGAT TCCTTCCTTG CTGGAGGCCG
TCCGTACCTT CTTGACGAAT 1051 GCCGGACGCG CGACGTTCAG CGTTGCCATG
ACTTCGGTCG GGGTCAATTT 1101 CCTGATTGGA GAGCAATATT TGAGCATCCT
GCTTTCGGGA GAAACGTTCA 1151 AACCCGTTTA CGACAAACTC GGCCTGCATT
CGTGCAACCT GTCGCGGACT 1201 CTGGAAGATG CGGGGACGGT GATTAACCCG
CTCGTGCCGT GGAGCGTGTG 1251 CGGCGTATTT ATCAGCCACG CCCTTGGCGT
ACCCGTTTGG GAATATCTGC 1301 CTTATGCCTT TTTCTGCTAT TTGAGTTTGG
CTTTAACCCT GTTATTCGGC 1351 TGGACGGGGC TGACTTTGAG CAAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 2380; ORF
709.ng>:
TABLE-US-02822 g709.pep 1 MFAFKSLLDM PRGEALAVVV ALIAAMGYTI
ISLEWLPHMS IIAAIVVLIL 51 YGLARGLKYN DMQAGMIGAL NQGMGAVYLF
FFIGLMVSAL MMSGAIPTLM 101 YYGFGLISPT YFYFSAFALC SVIGVSIGSS
LTACATVGVA FMGMAAAFQA 151 DMAMTAGAIV SGVFFGDKMS PLSDTTGISA
SIVGIDLFEH IKNMMYTTIP 201 AWLISAALML WLLPSVAAQD LNSVESFRSQ
LEATGLVHGY SLIPFALLVV 251 LALMRVNAVV AMLFTVIAAV AVTYLHSTPD
LRQLGAWFYG GYKLEGEAFK 301 DIAKLISRGG LESMFFTQTI VILGMSLGGL
LFALGVIPSL LEAVRTFLTN 351 AGRATFSVAM TSVGVNFLIG EQYLSILLSG
ETFKPVYDKL GLHSCNLSRT 401 LEDAGTVINP LVPWSVCGVF ISHALGVPVW
EYLPYAFFCY LSLALTLLFG 451 WTGLTLSKK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2381>:
TABLE-US-02823 m709.seq 1 ATGTTCGCTT TCAAATCCTT ACTCGATATG
CCGCGCGGTG AGGCACTTGC 51 CGTCGTCGTC GCTCTGATTG CCGCGATGGG
CTATACCATC ATTTCATTGG 101 AGTGGTTGCC GCATATGTCC ATTATTGCCG
CCATCGTCGT GCTGATTTTG 151 TACGGCTTGG CGCGCGGTTT GAAATACAAC
GATATGCAGC AGGGCATGAT 201 AGGCGCGTTG AATCAGGGTA TGGGCGCGAT
TTACCTGTTT TTCTTCATCG 251 GGCTGATGGT CAGCGCGCTG ATGATGAGCG
GCGCGATTCC GACGCTGATG 301 TATTACGGTT TCGGACTGAT TTCCCCGACT
TATTTTTATT TTTCCTCCTT 351 CGCGCTGTGT TCCGTCATCG GCGTGTCCAT
CGGCAGCAGC CTGACCACCT 401 GCGCCACTGT CGGCGTTGCC TTTATGGGGA
TGGCGGCGGC GTTTCAGGCC 451 GATATGGCGA TGACGGCGGG CGCGATTGTT
TCGGGCGCAT TTTTTGGCGA 501 CAAAATGTCC CCGCTTTCGG ATACGACGGG
TATTTCCGCG TCCATCGTCG 551 GCATCGACTT GTTTGAGCAC ATCAAAAATA
TGATGTACAC CACCATCCCC 601 GCGTGGCTCA TTAGTGCGGC ACTGATGCTT
TGGCTTTTGC CGAATGTCGC 651 CGCGCAGGAT TTGAACAGCG TCGAATCCTT
CCGCAGCCAG CTTGAAGCCA 701 CGGGATTGGT GCACGGCTAT TCGCTGATTC
CGTTTGCGCT GTTGGTCATT 751 TTGGCATTGA TGCGCATCAA CGCCGTCGTC
GCCATGCTCT TTACCGTCAT 801 GGTTGCCGTT GCTGTAACGT ATCTGCACAG
CACGCCCGAT CTGCGTCAGC 851 TCGGTGCGTG GTTTTACGGC GGCTACAAAC
TCGAAGGCGA AGCGTTTAAA 901 GATGTTGTCA AACTGATTTC GCGCGGCGGT
TTGGAAAGTA TGTTTTTCAC 951 GCAAACCATC GTGATTCTCG GGATGAGTTT
GGGCGGACTG TTGTTTGCGC 1001 TCGGTGTGAT TCCTTCCCTG TTGGAGGCCA
TCCGTACCTT CTTGACGAAT 1051 GCCGGACGCG CGACGTTCAG CGTTGCCATG
ACTTCGGTCG GGGTTAATTT 1101 CCTGATCGGC GAGCAATATT TGAGTATTTT
GTTGTCGGGT GAAACGTTCA 1151 AACCCGTTTA CGATAAGCTC GGTCTGCATT
CGCGCAATCT GTCGCGGACG 1201 CTGGAAGATG CGGGGACGGT GATTAACCCG
CTCGTACCGT GGAGCGTATG 1251 CGGCGTGTTC ATCAGCCACG CGCTGGGCGT
GCCGGTTTGG GAATATCTGC 1301 CGTATGCCTT TTTCTGCTAT TTGAGTTTGG
CTTTGACCCT GTTATTCGGT 1351 TGGACGGGGC TGACTTTGAG CAAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 2382; ORF
709>:
TABLE-US-02824 m709.pep 1 MFAFKSLLDM PRGEALAVVV ALIAAMGYTI
ISLEWLPHMS IIAAIVVLIL 51 YGLARGLKYN DMQQGMIGAL NQGMGAIYLF
FFIGLMVSAL MMSGAIPTLM 101 YYGFGLISPT YFYFSSFALC SVIGVSIGSS
LTTCATVGVA FMGMAAAFQA 151 DMAMTAGAIV SGAFFGDKMS PLSDTTGISA
SIVGIDLFEH IKNMMYTTIP 201 AWLISAALML WLLPNVAAQD LNSVESFRSQ
LEATGLVHGY SLIPFALLVI 251 LALMRINAVV AMLFTVMVAV AVTYLHSTPD
LRQLGAWFYG GYKLEGEAFK 301 DVVKLISRGG LESMFFTQTI VILGMSLGGL
LFALGVIPSL LEAIRTFLTN 351 AGRATFSVAM TSVGVNFLIG EQYLSILLSG
ETFKPVYDKL GLHSRNLSRT 401 LEDAGTVINP LVPWSVCGVF ISHALGVPVW
EYLPYAFFCY LSLALTLLFG 451 WTGLTLSKK* m709/g709 96.9% identity in
459 aa overlap 10 20 30 40 50 60 m709.pep
MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAAIVVLILYGLARGLKYN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g709
MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAAIVVLILYGLARGLKYN 10 20
30 40 50 60 70 80 90 100 110 120 m709.pep
DMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSSFALC |||
||||||||||||:||||||||||||||||||||||||||||||||||||||:|||| g709
DMQAGMIGALNQGMGAVYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSAFALC 70 80
90 100 110 120 130 140 150 160 170 180 m709.pep
SVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIVSGAFFGDKMSPLSDTTGISA
||||||||||||:|||||||||||||||||||||||||||||:||||||||||||||||| g709
SVIGVSIGSSLTACATVGVAFMGMAAAFQADMAMTAGAIVSGVFFGDKMSPLSDTTGISA 130
140 150 160 170 180 190 200 210 220 230 240 m709.pep
SIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAAQDLNSVESFRSQLEATGLVHGY
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| g709
SIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAAQDLNSVESFRSQLEATGLVHGY 190
200 210 220 230 240 250 260 270 280 290 300 m709.pep
SLIPFALLVILALMRINAVVAMLFTVMVAVAVTYLHSTPDLRQLGAWFYGGYKLEGEAFK
|||||||||:|||||:||||||||||::|||||||||||||||||||||||||||||||| g709
SLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLHSTPDLRQLGAWFYGGYKLEGEAFK 250
260 270 280 290 300 310 320 330 340 350 360 m709.pep
DVVKLISRGGLESMFFTQTIVILGMSLGGLLFALGVIPSLLEAIRTFLTNAGRATFSVAM
|::||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| g709
DIAKLISRGGLESMFFTQTIVILGMSLGGLLFALGVIPSLLEAVRTFLTNAGRATFSVAM 310
320 330 340 350 360 370 380 390 400 410 420 m709.pep
TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSRNLSRTLEDAGTVINPLVPWSVCGVF
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| g709
TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSCNLSRTLEDAGTVINPLVPWSVCGVF 370
380 390 400 410 420 430 440 450 460 m709.pep
ISHALGVPVWEYLPYAFFCYLSLALTLLFGWTGLTLSKKX
|||||||||||||||||||||||||||||||||||||||| g709
ISHALGVPVWEYLPYAFFCYLSLALTLLFGWTGLTLSKKX 430 440 450 460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2383>:
TABLE-US-02825 a709.seq 1 ATGTTCGCTT TCNAATCCTT ACTCGATATG
CCGCGCGGTG AGGCNCTTGC 51 CGTCGTCGTC GCTCTGATTG CCGCGATGGG
CTATACCATC ATTTNNTTGG 101 AGTGGCTGCC GCATATGTCC ATTATTGCCG
CCATCGTNGT GCTGATTTTG 151 TACGGCTTGG CGCGCGGTTT GAAATACAAC
GATATGCAGC AGGGCATGAT 201 AGGCGCGTTG AATCAGGGTA TGGGCGCGAT
TTACCTNTTT TTCTTCATCG 251 GGCTGATGGT CAGCGCGCTG ATGATGAGCG
GCGCGATTCC GACGCTGATG 301 TATTACGGTT TCGGACTGAT TTCCCCGACT
TATTTTTATT TTTCCGCCTT 351 CGCGCTGTGT TCCGTCATCG GCGTGTCCAT
CGGCAGCAGC CTGACCACCT 401 GCGCCACTGT CGGCGTTGCC TTNATGGGTA
TNNNGNCGGC GTTTCNGGCC 451 NANATGGNGN NGNNGNNGGN CNNGATTGTN
NNGGNCGCAT TNTTNGGCGN 501 CAAAATGTCN CCGCTTTCCG ATACGNCGGG
CATNTCCGCG TCCATTGTCG 551 GTATCGACCT GTTTGAACAC ATCAAAAATA
TGATGTACAC NACCATTCCC 601 GCGTGGCTCA TCAGTGNNNC ACTGATGCTG
TNGCTTCTTC CCAGCGTCGC 651 CGCGCAGGAT TTGAACAGCG TCGAATCCTT
CCGCAGCCAG CTTGAAGCCA 701 CGGGATTGGT GCACTGCTAT TCGCTGATTC
CGTTTGCGCT GTTGGTCGTT 751 TTGGCATTGA TGCGCGTCAA TGCCGTGGTC
GCTATGCTCT TTACCGTCAT 801 TGCCGCCGTT GCCGTAACGT ATCTGCACAG
CACGCCCGAT CTGCGTCAGC 851 TCGGCGCGTG GTTTTACGGC GGCTACAAAC
TCGAAGGCGA AGCGTNTANA 901 GACATTGCCA AACTCATTTC TCGCGGCGGT
TTGGAAAGTA TGTTTTTCAC 951 GCAGACCATC GTGATTCTTG GGATGAGCCT
TGGCGGGCTG CTGTTTGCAC 1001 TGGGCGCGAT TCCTTCCCTG CTGGATGCCG
TCCGCAGCTT TTTGACGAAT 1051 GCCGGGCGTN CCACATTCAG CGTTGCCATG
ACTTCGGTCG GGGTTAATTT 1101 CCTGATCGGC GAGCAATATT TGAGTATTTT
GTTGTCNGGT GAAACGTTCA 1151 AACCTGTTTA CGATAAGCTC GGTCTGCATT
CGCGCAATCT GTCGCGGACG 1201 CTGGAAGATG CGGGGACGGT CATCAACCCG
CTCGTACCGT GGAGCGTATG 1251 CGGCGTGTTC ATCANCCACG CGCTGGGCGT
GCCGGTTTGG GAATATCTGC 1301 CGTATGCCTT TTTCTGCTAT TTGAGTTTGG
CTTTGACCCT GTTATTCGGT 1351 TGGACGGGGC TGACTTTGAG CAAAAAATAA
This corresponds to the amino acid sequence <SEQ ID 2384; ORF
709.a>:
TABLE-US-02826 a709.pep 1 MFAFXSLLDM PRGEALAVVV ALIAAMGYTI
IXLEWLPHMS IIAAIVVLIL 51 YGLARGLKYN DMQQGMIGAL NQGMGAIYLF
FFIGLMVSAL MMSGAIPTLM 101 YYGFGLISPT YFYFSAFALC SVIGVSIGSS
LTTCATVGVA XMGXXXAFXA 151 XMXXXXXXIV XXAXXGXKMS PLSDTXGXSA
SIVGIDLFEH IKNMMYTTIP 201 AWLISXXLML XLLPSVAAQD LNSVESFRSQ
LEATGLVHCY SLIPFALLVV 251 LALMRVNAVV AMLFTVIAAV AVTYLHSTPD
LRQLGAWFYG GYKLEGEAXX 301 DIAKLISRGG LESMFFTQTI VILGMSLGGL
LFALGAIPSL LDAVRSFLTN 351 AGRXTFSVAM TSVGVNFLIG EQYLSILLSG
ETFKPVYDKL GLHSRNLSRT 401 LEDAGTVINP LVPWSVCGVF IXHALGVPVW
EYLPYAFFCY LSLALTLLFG 451 WTGLTLSKK* a709/m709 91.1% identity in
459 aa overlap 10 20 30 40 50 60 a709.pep
MFAFXSLLDMPRGEALAVVVALIAAMGYTIIXLEWLPHMSIIAAIVVLILYGLARGLKYN ||||
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| m709
MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAAIVVLILYGLARGLKYN 10 20
30 40 50 60 70 80 90 100 110 120 a709.pep
DMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSAFALC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| m709
DMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSSFALC 70 80
90 100 110 120 130 140 150 160 170 180 a709.pep
SVIGVSIGSSLTTCATVGVAXMGXXXAFXAXMXXXXXXIVXXAXXGXKMSPLSDTXGXSA
|||||||||||||||||||| || || | | : || | | ||||||||:| || m709
SVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIVSGAFFGDKMSPLSDTTGISA 130
140 150 160 170 180 190 200 210 220 230 240 a709.pep
SIVGIDLFEHIKNMMYTTIPAWLISXXLMLXLLPSVAAQDLNSVESFRSQLEATGLVHCY
||||||||||||||||||||||||| ||| |||:||||||||||||||||||||||| | m709
SIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAAQDLNSVESFRSQLEATGLVHGY 190
200 210 220 230 240 250 260 270 280 290 300 a709.pep
SLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLHSTPDLRQLGAWFYGGYKLEGEAXX
|||||||||:|||||:||||||||||::|||||||||||||||||||||||||||||| m709
SLIPFALLVILALMRINAVVAMLFTVMVAVAVTYLHSTPDLRQLGAWFYGGYKLEGEAFK 250
260 270 280 290 300 310 320 330 340 350 360 a709.pep
DIAKLISRGGLESMFFTQTIVILGMSLGGLLFALGAIPSLLDAVRSFLTNAGRXTFSVAM
|::||||||||||||||||||||||||||||||||:|||||:|:|:||||||| |||||| m709
DVVKLISRGGLESMFFTQTIVILGMSLGGLLFALGVIPSLLEAIRTFLTNAGRATFSVAM 310
320 330 340 350 360 370 380 390 400 410 420 a709.pep
TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSRNLSRTLEDAGTVINPLVPWSVCGVF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m709
TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSRNLSRTLEDAGTVINPLVPWSVCGVF 370
380 390 400 410 420 430 440 450 460 a709.pep
IXHALGVPVWEYLPYAFFCYLSLALTLLFGWTGLTLSKKX |
|||||||||||||||||||||||||||||||||||||| m709
ISHALGVPVWEYLPYAFFCYLSLALILLFGWTGLILSKKX 430 440 450 460 g710.seq
not found g710.pep not found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2385>:
TABLE-US-02827 m710.seq 1 ATGGAAACCC ACGAAAAAAT CCGCCTGATG
CGCGAATTGA ATAAATGGTC 51 CCAGGAGGAT ATGGCGGAAA AGCTGGCGAT
GTCGGCAGGC GGGTATGCCA 101 AAATCGAACG GGGCGAAACG CAGTTAAATA
TCCCGCGTTT GGAGCAGTTG 151 GCTCAGATTT TCAAAATCGA TATGTGGGAC
TTGCTCAAAT CGGGCGGTGG 201 TGGGATGGTG TTTCAGATTA ATGAAGGTGA
TAGTGGTGGC GATATTGCGT 251 TGTATGCGTC GGGTGATGTT TCGATGAAAA
TAGAATTTTT AAAAATGGAG 301 TTGAAACACT GCAAAGAAAT GTTGGAACAA
AAAGACAAAG AAATCGAGCT 351 GCTCCGCAAG CTGACCGAAA CCGTTTAA
This corresponds to the amino acid sequence <SEQ ID 2386; ORF
710>:
TABLE-US-02828 m710.pep 1 METHEKIRLM RELNKWSQED MAEKLAMSAG
GYAKIERGET QLNIPRLEQL 51 AQIFKIDMWD LLKSGGGGMV FQINEGDSGG
DIALYASGDV SMKIEFLKME 101 LKHCKEMLEQ KDKEIELLRK LTETV*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2387>:
TABLE-US-02829 a710.seq 1 ATGGAAACCC ACGAAAAAAT CCGCCTGATG
CGCGAATTGA ATAAATGGTC 51 CCAGGAGGAT ATGGCGGAAA AGCTGGCGAT
GTCGGCAGGC GGGTATGCCA 101 AAATCGAACG AGGCGAAACG CAGTTGAATA
TCCCGCGTTT GGAGCAGTTG 151 GCGCAGATTT TCAAAATTGA TATGTGGGAC
TTGCTCAAAT CGGGCGGCGG 201 CGGGATGGTG TTGCAGATTA ACGATGTGGA
TACCAACAGC GGGGAATTTG 251 CAATCTATAC CGCTCAGGAT GCATCNGGTA
AAGCTGGATT TGTTAAAATG 301 GAATTAAAAC ACTGTAAAGA AATGTTGGAA
CACAAAGACA AAGAAATCGA 351 GCTGCTCCGC AAGCTGACCG AAACCGTTTA A
This corresponds to the amino acid sequence <SEQ ID 2388; ORF
710.a>:
TABLE-US-02830 a710.pep 1 METHEKIRLM RELNKWSQED MAEKLAMSAG
GYAKIERGET QLNIPRLEQL 51 AQIFKIDMWD LLKSGGGGMV LQINDVDTNS
GEFAIYTAQD ASGKAGFVKM 101 ELKHCKEMLE HKDKEIELLR KLTETV* a710/m710
85.7% identity in 126 aa overlap 10 20 30 40 50 60 a710.pep
METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNIPRLEQLAQIFKIDMWD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m710
METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNIPRLEQLAQIFKIDMWD 10 20
30 40 50 60 70 80 90 100 110 120 a710.pep
LLKSGGGGMVLQINDVDTNSGEFAIYTAQDASGKAGFVKMELKHCKEMLEHKDKEIELLR
||||||||||:|||: |:: |::|:|:: |:| | |:||||||||||||:||||||||| m710
LLKSGGGGMVFQINEGDSG-GDIALYASGDVSMKIEFLKMELKHCKEMLEQKDKEIELLR 70 80
90 100 110 a710.pep KLTETVX ||||||| m710 KLTETVX 120
[0335] g711.seq not found
[0336] g711.pep not found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2389>:
TABLE-US-02831 m711.seq 1 ATGCCCGCGC CTGATTTGGG ATTTGCCTTA
AGTCTGCCGC CAAAAAAGGC 51 AATCGAGTGG CTGGAAAGTA AAAAGGTTAC
GGCGGAGAGC TACCGCAATC 101 TGACAGCCTC CGAAATTGCC AAAGTCTATA
CGATTGCCCG CATGACCGAC 151 TTGGATATGC TCAACGACAT CAAAACTTCG
ATGGTTGAAT CGGCAAAAAG 201 TGGACAGTCG TTTGACGATT GGCGAAAAGG
TATCTTGAAT CTGCTCAGCA 251 ACAAGGGCTG GCTGCATCCG AACGGGCATA
ACGGTAAGGA TATCATCGAC 301 CCAGCCACCG GCGAGGTATT CGGTTCGCCG
CGGAGGTTGG AGACGATTTA 351 CCGTACCAAT ATGCAAACTG CCTACAACGC
CGGTCAATAT CAAGGATATA 401 TGGCAAATAT TGATGCACGA CCTTATTGGA
TGTATGACGC GGTAGGCGAC 451 AGCCGCACCC GTCCGGCGCA TTCGGCAATA
GACGGGCTGG TGTACCGCTA 501 CGACGACCCG TTTTGGGCAA CGTTTTACCC
GCCCAACGGC TACAACTGCC 551 GCTGCTCGGT CATCGCGCTG TCGGAGCGGG
ATGTGGAACG CCAGGGGCGG 601 ATTGTTGGGC AAAGCACGGC GGACAATCTG
GTCGAGACCC ATAAAATCTA 651 CAACAAAAAA GGCGATACTT ATCTGACCCT
TGCCTATAAA GCACCGGATG 701 GCAGTCTGTA CACGACCGAT CGAGGATTTG
ATTACAACGC CGGACGAATG 751 AACTACCGCC CCGATTTAGA CAAGTACGAC
CGTGCGTTGG CGCATCAATT 801 TGCCAAAGCG GAAATGGGTG GTGCGGATTT
TAAAACCAGC TTTAAACAGC 851 TTGAAAAAGA GTTTTATGAA GTCAAGCAAC
GTTTGGATAT TGATGGCAAG 901 CCCGATAAAG AGCAGAAAAT CAAAATCCGA
AATGCGCTAT CAAGACAGCT 951 TAAATTTGCT GCGGGTGTAT TGAGCAAGGA
AACGCAAGAA TTGGCAGGTA 1001 TGACACGAGC GACGGTGTGG CTGTCTGATG
ATACGTTGGT TAAACAGGTA 1051 GACAGCCGTG AGGGGCAGAA TTTCGATGAC
TCCTACTATG CTTTTTTGCC 1101 GGATATGCTG CAAAACCCTG AACATGTCAT
CCGCGACAAT CGTGAATTGA 1151 TTTTCACAGC TCGCTATAAA GGCTCGGCAT
TGTGGGCAGT TTTAAAATAT 1201 ATTAAGGAGG TGGATGAGAT TTATCTACAG
TCGTACCGAA TCAGTAACGA 1251 CAAAGAGATT GCCAAATTTA TGGCGAAGAA
GAAAGTATTG AAATAG
This corresponds to the amino acid sequence <SEQ ID 2390; ORF
711>:
TABLE-US-02832 m711.pep 1 MPAPDLGFAL SLPPKKAIEW LESKKVTAES
YRNLTASEIA KVYTIARMTD 51 LDMLNDIKTS MVESAKSGQS FDDWRKGILN
LLSNKGWLHP NGHNGKDIID 101 PATGEVFGSP RRLETIYRTN MQTAYNAGQY
QGYMANIDAR PYWMYDAVGD 151 SRTRPAHSAI DGLVYRYDDP FWATFYPPNG
YNCRCSVIAL SERDVERQGR 201 IVGQSTADNL VETHKIYNKK GDTYLTLAYK
APDGSLYTTD RGFDYNAGRM 251 NYRPDLDKYD RALAHQFAKA EMGGADFKTS
FKQLEKEFYE VKQRLDIDGK 301 PDKEQKIKIR NALSRQLKFA AGVLSKETQE
LAGMTRATVW LSDDTLVKQV 351 DSREGQNFDD SYYAFLPDML QNPEHVIRDN
RELIFTARYK GSALWAVLKY 401 IKEVDEIYLQ SYRISNDKEI AKFMAKKKVL K*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2391>:
TABLE-US-02833 a711.seq 1 ATGCCCGCGC CTGATTTGGG ATTTGCCTTA
AGTCTGCCGC CAAAAAAGGC 51 AATCGAGTGG CTGGAAAGTA AAAAGGTTAC
GGCGGAGAGC TACCGCAATC 101 TGACAGCCTC CGAAATTGCC AAAGTCTATA
CGATTGCCCG CATGACCGAC 151 TTGGATATGC TCAACGACAT CAAAACTTCG
ATGGTTGAAT CGGCAAAAAG 201 TGGACAGTCG TTTGACGATT GGCGAAAAGG
TATCTTGAAT CTGCTCAGCA 251 ACAAGGGCTG GCTGCATCCG AACGGGCATA
ACGGTAAGGA TATCATCGAC 301 CCAGCCACCG GCGAGGTATT CGGTTCGCCG
CGGAGGTTGG AGACGATTTA 351 CCGTACCAAC ATGCAAACTG CCTACAACGC
CGGTCAATAT CAAGGATATA 401 TGGCAAATAT TGATGCACGA CCTTATTGGA
TGTATGACGC GGTAGGCGAC 451 AGCCGCACCC GTCCGGCGCA TTCGGCAATA
GACGGGCTGG TGTACCGCTA 501 CGACGACCCG TTTTGGGCAA CGTTTTACCC
GCCCAACGGC TACAACTGCC 551 GTTGCTCGGT CATCGCGCTG TCGGAGCGGG
ATGTGGAACG CCAGGGGCGG 601 ATTGTCGGGC AAAGCACGTC GGACAATCTT
GTTGAGACCC ATAAAATCTA 651 CAACAAAAAA GGCGATACTT ATCTGACCCT
TGCCTATAAA GCACCGGATG 701 GCAGTCTGTA CACGACCGAT CGAGGATTTG
ATTACAACGC CGGACGAATG 751 AACTACCGCC CCGATTTAGA CAAGTACGAC
CGTGCGTTGG CGCATCAATT 801 TGCCAAAGCG GAAATGGGTG GTGCGGATTT
TAAAACCAGC TTTAAACAGC 851 TTGAAAAAGA GTTTTATGAA GTCAAGCAAC
GTTTGGATAT TGATGGCAAG 901 CCCGATAAAG AGCAGAAAAT CAAAATCCGA
AATGCGCTAT CAAGACAGCT 951 TAAATTTGCT GCGGGTGTAT TGAGCAAGGA
AACGCAAGAA TTGGCAGGTA 1001 TGACACGAGC GACGGTGTGG CTGTCTGATG
ATACGTTGGT TAAACAGGTA 1051 GACAGCCGTG AAGGGCAGAA TTTCGATGAC
TCCTACTATG CTTTTTTGCC 1101 GGATATGCTG CAAAACCCTG AACATGTCAT
CCGCGACAAT CGTGAATTGA 1151 TTTTCACAGC TCGCTATAAA GGCTCGGCAT
TGTGGGCAGT TTTAAAATAT 1201 ATTAAGGAGG TGGATGAGAT TTATCTACAG
TCGTACCGAA TCAGTAACGA 1251 CAAAGAGATT GCCAAATTTA TGGCGAAGAA
GAAAGTATTG AAATAG
This corresponds to the amino acid sequence <SEQ ID 2392; ORF
711.a>:
TABLE-US-02834 a711.pep 1 MPAPDLGFAL SLPPKKAIEW LESKKVTAES
YRNLTASEIA KVYTIARMTD 51 LDMLNDIKTS MVESAKSGQS FDDWRKGILN
LLSNKGWLHP NGHNGKDIID 101 PATGEVFGSP RRLETIYRTN MQTAYNAGQY
QGYMANIDAR PYWMYDAVGD 151 SRTRPAHSAI DGLVYRYDDP FWATFYPPNG
YNCRCSVIAL SERDVERQGR 201 IVGQSTSDNL VETHKIYNKK GDTYLTLAYK
APDGSLYTTD RGFDYNAGRM 251 NYRPDLDKYD RALAHQFAKA EMGGADFKTS
FKQLEKEFYE VKQRLDIDGK 301 PDKEQKIKIR NALSRQLKFA AGVLSKETQE
LAGMTRATVW LSDDTLVKQV 351 DSREGQNFDD SYYAFLPDML QNPEHVIRDN
RELIFTARYK GSALWAVLKY 401 IKEVDEIYLQ SYRISNDKEI AKFMAKKKVL K*
a711/m711 99.8% identity in 431 aa overlap 10 20 30 40 50 60
a711.pep
MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYTIARMTDLDMLNDIKTS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYTIARMTDLDMLNDIKTS 10 20
30 40 50 60 70 80 90 100 110 120 a711.pep
MVESAKSGQSFDDWRKGILNLLSNKGWLHPNGHNGKDIIDPATGEVFGSPRRLETIYRTN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
MVESAKSGQSFDDWRKGILNLLSNKGWLHPNGHNGKDIIDPATGEVFGSPRRLETIYRTN 70 80
90 100 110 120 130 140 150 160 170 180 a711.pep
MQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAIDGLVYRYDDPFWATFYPPNG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
MQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAIDGLVYRYDDPFWATFYPPNG 130
140 150 160 170 180 190 200 210 220 230 240 a711.pep
YNCRCSVIALSERDVERQGRIVGQSTSDNLVETHKIYNKKGDTYLTLAYKAPDGSLYTTD
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| m711
YNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYNKKGDTYLTLAYKAPDGSLYTTD 190
200 210 220 230 240 250 260 270 280 290 300 a711.pep
RGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGADFKTSFKQLEKEFYEVKQRLDIDGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
RGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGADFKTSFKQLEKEFYEVKQRLDIDGK 250
260 270 280 290 300 310 320 330 340 350 360 a711.pep
PDKEQKIKIRNALSRQLKFAAGVLSKETQELAGMTRATVWLSDDTLVKQVDSREGQNFDD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
PDKEQKIKIRNALSRQLKFAAGVLSKETQELAGMTRATVWLSDDTLVKQVDSREGQNFDD 310
320 330 340 350 360 370 380 390 400 410 420 a711.pep
SYYAFLPDMLQNPEHVIRDNRELIFTARYKGSALWAVLKYIKEVDEIYLQSYRISNDKEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m711
SYYAFLPDMLQNPEHVIRDNRELIFTARYKGSALWAVLKYIKEVDEIYLQSYRISNDKEI 370
380 390 400 410 420 430 a711.pep AKFMAKKKVLKX |||||||||||| m711
AKFMAKKKVLKX 430
[0337] g712.seq not found yet
[0338] g712.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2393>:
TABLE-US-02835 m712.seq 1 ATGATGCCCC ATATTGATTT TGACACGATT
CCGGGCAGCA TCCGCGTGCC 51 CGGGCAGTAT ATTGAATTTA ACACCCGCAA
TGCCGTACAA GGTTTGCCGC 101 AAAATCCGCA AAAGGTATTG ATGGTTGCAC
CCATGCTGAC CGCGGGCATA 151 CAGACCGTCT TAGAGCCGGT GCAACTATTT
AGCGATGCCG AGGCGGCCGA 201 TTTGTTCGGA CAAGGCTCGC TGGCGCATTT
GATGGTGCGC CAAGCATTTG 251 CCAACAACCC TTATTTGGAT TTGACCGTTA
TCGGTATTGC CGACCACAGC 301 GCAGGCGTGC AGGCAACCGC AACCGTTACC
CTTTCCGGCA CGGCCACCGC 351 GCCGGGCGTG GTGGAAATCA CGATTGGCGG
CAAGCAGGTA AGCACGGCCG 401 TTAACACCGG CGAGACCGCC GCCACAGTGG
CAGACCGTCT GAAAACCGCC 451 ATCACTGCCG CCGATGTAAC CGTTACCGCA
TCCGGCAGCG GCGCAGCCGT 501 TACGCTGACG GCCAAACACA AAGGCGAGAT
CGGCAACGAG AGCGGCTTAA 551 CCGTGAGCAC CGGCAATACC GGCCTAACTT
ATCAAGCCAA TGCCTTTACC 601 GGCGGTGCCA AAAATGCGGA CATTGCCACG
GCCTTGTCCA AAGTGGCGGG 651 CAAGCATTAT CACATTATTT GCAGCCCGTT
TAGCGATGAC GCCAACGCCA 701 AAGCCTTGAG CAACCATATT ACCAACGTAT
CCAACGCCAT CGAGCAGCGC 751 GGCTGTATCG GCGTATTGGG TATGAGTGCG
GCCTTGAGCA CGGCCACCAC 801 CGCTACCGGC GAAATCAACG ACGGCCGCAT
GACCTGTGCT TGGTACAAAG 851 GTGCGGTAGA GCCAAACGGC ATCATCGCCG
CAGGTTATGC GGCGGTGTTG 901 GCCTTTGAAG AAGACCCTGC CAAGCCGCTG
AACACGCTGG AAATCAAAGG 951 GCTGGCCGTT ACACCTGATG CGCAATGGCC
GCTGTTTGCA GAATGCAACA 1001 ATGCGCTGTA CAACGGCTTG ACCCCGCTCA
CAGTGGTCAA CAACCGCGTG 1051 CAGATTATGC GTGCCGTATC CACCTATACC
AAGTCGGCCA ACAACACCGA 1101 CGACCCGGCA CTACTCGACA TTACCACCAT
CCGCACGCTG GATTATGTGC 1151 GCCGCAGCGT TAAAGAGCGC ATTGCCCTGC
GTTTTCCGCG CGACAAATTG 1201 AGCGACCGCC TGCTGCCCAA GGTTAAGAGC
GAGATTTTGG ACGTGCTGAT 1251 TAAGCTCGAC CAAGCCGAAA TCATCGAAAA
CGCCGAGGCC AACAAAGGCA 1301 AGCTGGTGGT GGCGCGTGCG CAAAACGACC
CCAACCGTGT TAATGCCATT 1351 ATCACTGCCG ATGTGGTCAA CGGCCTGCAC
GTCTTTGCCG GGCGCATTGA 1401 TTTGATTTTG TAA
This corresponds to the amino acid sequence <SEQ ID 2394; ORF
712>:
TABLE-US-02836 m712.pep 1 MMPHIDFDTI PGSIRVPGQY IEFNTRNAVQ
GLPQNPQKVL MVAPMLTAGI 51 QPALEPVQLF SDAEAADLFG QGSLAHLMVR
QAFANNPYLD LTVIGIADHS 101 AGVQATATVT LSGTATAPGV VEITIGGKQV
STAVNTGETA ATVADRLKTA 151 ITAADVTVTA SGSGAAVTLT AKHKGEIGNE
SGLTVSTGNT GLTYQANAFT 201 GGAKNADIAT ALSKVAGKHY HIICSPFSDD
ANAKALSNHI TNVSNAIEQR 251 GCIGVLGMSA ALSTATTATG EINDGRMTCA
WYKGAVEPNG IIAAGYAAVL 301 AFEEDPAKPL NTLEIKGLAV TPDAQWPLFA
ECNNALYNGL TPLTVVNNRV 351 QIMRAVSTYT KSANNTDDPA LLDITTIRTL
DYVRRSVKER IALRFPRDKL 401 SDRLLPKVKS EILDVLIKLD QAEIIENAEA
NKGKLVVARA QNDPNRVNAI 451 IPADVVNGLH VFAGRIDLIL *
[0339] a712.seq not found yet
[0340] a712.pep not found yet
[0341] g713.seq not found yet
[0342] g713.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2395>:
TABLE-US-02837 m713.seq 1 ATGCAAAATA ATTCATACGG CTATGCCGTG
TCGGTGCGCG TGGGCGGTAA 51 AGAGCACCGC CACTGGGAGC GCTACGACAT
CGACAGCGAC TTTTTAATCC 101 CTGCCGACAG CTTCGATTTT GTCATCGGCA
GGTTGGGACC GGAGGCGGCC 151 ATACCCGATT TAAGCGGAGA GAGCTGCGAG
GTAGTGATAG ACGGGCAAAT 201 CGTGATGACG GGCATCATCG GCAGCCAGCG
CCACGGCAAA AGCAAGGGCA 251 GCCGCGAGTT GAGCTTGAGC GGGCGTGATT
TGGCCGGTTT TTTGGTGGAT 301 TGCTCCGCGC CGCAGCTCAA TGTAAAGGGC
ATGACGGTAT TGGATGCAGC 351 CAAAAAGCTG GCCGCGCCGT GGCCGCAGAT
TAAAGCGGTG GTGCTTAAGG 401 CCGAAAACAA CCCCGCTTTG GGCAAAATCG
ACATCGAGCC GGGCGAAACC 451 GTATGGCAGG CATTAACCCA TATTGCCAAC
TCGGTCGGGC TGCATCCGTG 501 GCTGGAGCCG GACGGCACGT TGGTGGTGGG
CGGTGCGGAT TACAGCAGCC 551 CGCCGGTGGC GACATTGTGT TGGAGCCGCA
CCGACAGCCG CTGCAATATC 601 GAGCGCATGG ACATTGAGTG GGATACCGAC
AACCGCTTTT CCGAGGTTAC 651 TTTTTTGGCG CAATCGCACG GCCGCAGCGG
CGACAGCGCC AAACACGATT 701 TAAAGTGGGT GTACAAAGAC CCGACGATGA
CGCTGCACCG CCCTAAAACG 751 GTGGTGGTGT CCGATGCCGA CAATTTGGCC
GCATTGCAAA AGCAGGCTAA 801 AAAGCAGCTG GCCGACTGGC GGCTGGAGGG
ATTTACACTC ACGATAACCG 851 TGGGCGGCCA TAAAACCCGC GACGGCGTAT
TGTGGCAACC TGGCCTGCGT 901 GTGCATGTGA TCGACGACGA GCACGGTATC
GATGCGGTGT TTTTTCTGAT 951 GGGGCGGCGG TTTATGCTAT CCCGCATGGA
TGGTACGCAA ACCGAGCTGC 1001 GGCTCAAAGA GGACGGTATT TGGACACCCG
ACGCTTACCC CAAAAAGGCC 1051 GAGGCGGCGC GCAAGCGCAA AGGCAAACGC
AAAGGCGTGA GCCATAAGGG 1101 CAAAAAAGGC GGCAAAAAAC AAGCAGAAAC
GGCGGTGTTT GAATGA
This corresponds to the amino acid sequence <SEQ ID 2396; ORF
713>:
TABLE-US-02838 m713.pep 1 MQNNSYGYAV SVRVGGKEHR HWERYDIDSD
FLIPADSFDF VIGRLGPEAA 51 IPDLSGESCE VVIDGQIVMT GIIGSQRHGK
SKGSRELSLS GRDLAGFLVD 101 CSAPQLNVKG MTVLDAAKKL AAPWPQIKAV
VLKAENNPAL GKIDIEPGET 151 VWQALTHIAN SVGLHPWLEP DGTLVVGGAD
YSSPPVATLC WSRTDSRCNI 201 ERMDIEWDTD NRFSEVTFLA QSHGRSGDSA
KHDLKWVYKD PTMTLHRPKT 251 VVVSDADNLA ALQKQAKKQL ADWRLEGFTL
TITVGGHKTR DGVLWQPGLR 301 VHVIDDEHGI DAVFFLMGRR FMLSRMDGTQ
TELRLKEDGI WTPDAYPKKA 351 EAARKRKGKR KGVSHKGKKG GKKQAETAVF E*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2397>:
TABLE-US-02839 a713.seq 1 ATGCAAAATA ATTCATACGG CTATGCCGTG
TCGGTGCGCG TGGGCGGTAA 51 AGAGCACCGC CACTGGGAGC GCTACGACAT
CGACAGCGAC TTTTTAATCC 101 CTGCCGACAG CTTCGATTTT GTCATCGGCA
GGTTGGGGCC GGAGGCGGCC 151 ATACCCGATT TAAGCGGAGA GAGCTGCGAG
GTAGTGATAG ACGGGCAAAT 201 CGTGATGACG GGCATCATCG GCAGCCAGCG
CCACGGCAAA AGCAAGGGCG 251 GCCGCGAGTT GAGCTTGAGC GGGCGTGATT
TGGCCGGTTT TTTGGTGGAT 301 TGCTCCGCGC CGCAGCTCAA TGTAAAGGGC
ATGACGGTAT TGGATGCAGC 351 CAAAAAGCTG GCCGCGCCGT GGCCGCAGAT
TAAAGCGGTG GTGCTTAAGG 401 TCGAAAACAA CCCCGCTTTG GACAAAATCG
ACATCGAGCC GGGCGAAACC 451 GTATGGCAGG CATTAACCCA TATTGCCAAC
TCGGTCGGGC TGCATCCGTG 501 GCTGGAGCCG GACGGCACGT TGGTGGTGGG
CGGTGTGGAT TACAGCAGCC 551 CGCCGGTGGC GACATTGTGT TGGAGCCGCA
CCGACAGCCG CCGCAATATC 601 GAGCGCATGG ACATTGAGTG GGATACCGAC
AACCGCTTTT CTGAGGTTAC 651 TTTTTTGGCG CAATCGCACG GCCGCAGCGG
CGACAGCGCC AAACACGATT 701 TAAAGTGGGT GTACAAAGAC CCGACGATGA
CGCTGCACCG CCCTAAAACG 751 GTGGTGGTGT CCGATGCCGA CAATTTGGCC
GCATTGCAAA AGCAGGCTAA 801 AAAGCAGCTG GCCGACTGGC GGCTGGAGGG
ATTTACACTC ACGATAACCG 851 TGGGCGGCCA TAAAACCCGC GACGGCGTAT
TGTGGCAACC TGGCCAGCGT 901 GTGCATGTGA TCGACGACGA GCACGGTATC
GATGCGGTGT TTTTTCTGAT 951 GGGGCGGCGG TTTATGCTAT CTCGCATGGA
TGGCACGCAA ACCGAGCTGC 1001 GGCTCAAAGA GGACGGTATT TGGACACCCG
ACGCTTACCC CAAAAAGGCC 1051 GAGGCGGCGC GCAAGCGCAA AGGCAAACGC
AAAGGCGTGA GCCATAAGGG 1101 CAAAAAAGGC GGCAAAAAAC AAGCAGAAAC
GGCGGTGTTT GAATGA
This corresponds to the amino acid sequence <SEQ ID 2398; ORF
713.a>:
TABLE-US-02840 a713.pep 1 MQNNSYGYAV SVRVGGKEHR HWERYDIDSD
FLIPADSFDF VIGRLGPEAA 51 IPDLSGESCE VVIDGQIVMT GIIGSQRHGK
SKGGRELSLS GRDLAGFLVD 101 CSAPQLNVKG MTVLDAAKKL AAPWPQIKAV
VLKVENNPAL DKIDIEPGET 151 VWQALTHIAN SVGLHPWLEP DGTLVVGGVD
YSSPPVATLC WSRTDSRRNI 201 ERMDIEWDTD NRFSEVTFLA QSHGRSGDSA
KHDLKWVYKD PTMTLHRPKT 251 VVVSDADNLA ALQKQAKKQL ADWRLEGFTL
TITVGGHKTR DGVLWQPGQR 301 VHVIDDEHGI DAVFFLMGRR FMLSRMDGTQ
TELRLKEDGI WTPDAYPKKA 351 EAARKRKGKR KGVSHKGKKG GKKQAETAVF E*
a713/m713 98.4% identity in 381 aa overlap 10 20 30 40 50 60
a713.pep
MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGRLGPEAAIPDLSGESCE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m713
MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGRLGPEAAIPDLSGESCE 10 20
30 40 50 60 70 80 90 100 110 120 a713.pep
VVIDGQIVMTGIIGSQRHGKSKGGRELSLSGRDLAGFLVDCSAPQLNVKGMTVLDAAKKL
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m713
VVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCSAPQLNVKGMTVLDAAKKL 70 80
90 100 110 120 130 140 150 160 170 180 a713.pep
AAPWPQIKAVVLKVENNPALDKIDIEPGETVWQALTHIANSVGLHPWLEPDGTLVVGGVD
|||||||||||||:|||||| |||||||||||||||||||||||||||||||||||||:| m713
AAPWPQIKAVVLKAENNPALGKIDIEPGETVWQALTHIANSVGLHPWLEPDGTLVVGGAD 130
140 150 160 170 180 190 200 210 220 230 240 a713.pep
YSSPPVATLCWSRIDSRRNIERMDIEWDIDNRFSEVTFLAQSHGRSGDSAKHDLKWVYKD
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| m713
YSSPPVATLCWSRIDSRCNIERMDIEWDIDNRFSEVTFLAQSHGRSGDSAKHDLKWVYKD 190
200 210 220 230 240 250 260 270 280 290 300 a713.pep
PTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGQR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | m713
PTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGLR 250
260 270 280 290 300 310 320 330 340 350 360 a713.pep
VHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELRLKEDGIWTPDAYPKKAEAARKRKGKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m713
VHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELRLKEDGIWTPDAYPKKAEAARKRKGKR 310
320 330 340 350 360 370 380 a713.pep KGVSHKGKKGGKKQAETAVFEX
|||||||||||||||||||||| m713 KGVSHKGKKGGKKQAETAVFEX 370 380
[0343] g714.seq not found yet
[0344] g714.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2399>:
TABLE-US-02841 m714.seq 1 ATGAGCTATC AAGACATCTT GCGGGGCCTG
TTGCCCCCCG TGTCGTATGC 51 CCGCAATGCC CCGCGTGTGC GGGCGCAGGC
AGAAATAGAC GGCGCAGCGC 101 TGGATGCGGT GGCGGAATCG GCTCAAAGCG
TTGCCGATGC CGTCGACCCG 151 CGCAGCGCCG GCCAAATGCT GGCCGATTGG
GAGCGCGTAT TAGGTTTGGA 201 CGGTACGGGC AAAAACCGCC AGCACCGTGT
GTTGGCCGTC ATGGCCAAGC 251 TAAACGAAAC AGGCGGCTTG AGTATTCCTT
ATTTTGTGCG TTTGGCCGAG 301 GCGGCGGGCT ATCAAATCCA AATCGACGAA
CCGCAGCCGT TCCGCGCCGG 351 TGTAAACCGC GCCGGCGACC GTCTTGCGCC
GCAGGAAATC ATGTGGGTGT 401 GGCACGTTAA CGTGCGCGGC GGCAACAACC
GCATTACCCG ATTCCGCGCC 451 GGTATCTCGG CGGCGGGCGA CAGGCTGACC
GATTACAGCG ATGCCGTGAT 501 CGAGAGCCTG TTCAACCGCC TCAAGCCCGC
CCACACCGCT ATCCGATTTA 551 CCTACCGCTA A
This corresponds to the amino acid sequence <SEQ ID 2400; ORF
714>:
TABLE-US-02842 m714.pep 1 MSYQDILRGL LPPVSYARNA PRVRAQAEID
GAALDAVAES AQSVADAVDP 51 RSAGQMLADW ERVLGLDGTG KNRQHRVLAV
MAKLNETGGL SIPYFVRLAE 101 AAGYQIQIDE PQPFRAGVNR AGDRLAPQEI
MWVWHVNVRG GNNRITRFRA 151 GISAAGDRLT DYSDAVIESL FNRLKPAHTA
IRFTYR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2401>:
TABLE-US-02843 a714.seq 1 ATGAGCTATC AAGACATCTT GCGGGGTCTG
TTGCCCCCCG TGTCGTATGC 51 CCGCAATGCC CCGCGTGTGC GGGCGCAGGC
AGAAATAGAC GGCGCAGCGC 101 TGGATGCGGT GGCGGAATCG GCTCAAAGCG
TTGCCGATGC CGTCGACCCG 151 AGCAGCGCCG GCCAAATGCT GGCCGATTGG
GAGCGCGTAT TAGGTTTGGA 201 CGGTACGGGC AAAAACCGCC AGCGCCGTGT
GTTGGCCGTC ATGGCCAAGC 251 TAAACGAAAC AGGCGGCTTG AGTATTCCTT
ATTTTGTGCG TTTGGCCGAG 301 GCGGCGGGCT ATCAAATCCA AATCGACGAA
CCGCAGCCGT TCCGCGCCGG 351 TGTAAACCGC GCCGGCGACC GTCTTGCGCC
GCAGGAAATC ATGTGGGTGT 401 GGCACGTTAA CGTGCGCGGC GGCAACAACC
GCATTACCCG ATTCCGCGCC 451 GGTATCTCGG CGGCGGGCGA CAGGCTGACC
GATTACAGCG ATGCCGTGAT 501 CGAGAGCCTG TTCAACCGCC TCAAGCCCGC
CCACACCGCT ATCCGATTTA 551 CCTACCGATA A
This corresponds to the amino acid sequence <SEQ ID 2402; ORF
714.a>:
TABLE-US-02844 a714.pep 1 MSYQDILRGL LPPVSYARNA PRVRAQAEID
GAALDAVAES AQSVADAVDP 51 SSAGQMLADW ERVLGLDGTG KNRQRRVLAV
MAKLNETGGL SIPYFVRLAE 101 AAGYQIQIDE PQPFRAGVNR AGDRLAPQEI
MWVWHVNVRG GNNRITRFRA 151 GISAAGDRLT DYSDAVIESL FNRLKPAHTA IRFTYR*
a714/m714 98.9% identity in 186 aa overlap 10 20 30 40 50 60
a714.pep
MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSVADAVDPSSAGQMLADW
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| m714
MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSVADAVDPRSAGQMLADW 10 20
30 40 50 60 70 80 90 100 110 120 a714.pep
ERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAAGYQIQIDEPQPFRAGVNR
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| m714
ERVLGLDGIGKNRQHRVLAVMAKLNEIGGLSIPYFVRLAEAAGYQIQIDEPQPFRAGVNR 70 80
90 100 110 120 130 140 150 160 170 180 a714.pep
AGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLTDYSDAVIESLFNRLKPAHTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m714
AGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLIDYSDAVIESLFNRLKPAHTA 130
140 150 160 170 180 a714.pep IRFTYRX ||||||| m714 IRFTYRX
[0345] g715.seq not found yet
[0346] g715.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2403>:
TABLE-US-02845 m715.seq 1 ATGATTGATG TCAAAATAGA CAATATCTTT
GTCGTCCTAA ACCAAATCGA 51 GCGGCTTGGC AACGGGATCG AAAACCGCTA
CCTGCTGATG CGCCGACTGT 101 CCGAAACCAT GCACACGGCG GTCAAGCTCA
ATTTCCGCTA CGCAGGCCGT 151 CCGAAATGGG TTGGGCTAAA ATACCGCGAC
GGCAAGCCGC TTTCGGATTC 201 GGGTCGTCTG AAAGACAGTT TTTCCACACT
GTCAGACAAC GATACAGCCC 251 TTGTCGGTAC GAATATCGTC TATGCCGCCA
TCCACAACTT CGGCGGTATG 301 GCGGGGCGCA ACCGCAAAGT TCGGATTCCG
CAACGGGAAT TTTTGACGCT 351 GACGGACGAC GACAAACAGG CTTTGATGGA
CGATGTGCAG GATTATTTTT 401 CGGGTCTGAT ACCGTGA
This corresponds to the amino acid sequence <SEQ ID 2404; ORF
715>:
TABLE-US-02846 m715.pep 1 MIDVKIDNIF VVLNQIERLG NGIENRYLLM
RRLSETMHTA VKLNFRYAGR 51 PKWVGLKYRD GKPLSDSGRL KDSFSTLSDN
DTALVGTNIV YAAIHNFGGM 101 AGRNRKVRIP QREFLTLTDD DKQALMDDVQ
DYFSGLIP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2405>:
TABLE-US-02847 a715.seq 1 ATGATTGATG TCAAAATAGA CAATATCTTT
GTCGTCCTAA ACCAAATCGA 51 GCGGCTTGGC AACGGGATCG AAAACCGCTA
CCTGCTGATG CGCCGACTGT 101 CCGAAACCAT GCACACGGCG GTCAAGCTCA
ATTTCCGCTA CGCAGGCCGT 151 CCGAAATGGT TGGGGCTAAA ATACCGCGAC
GGCAAGCCGC TTTCGGATTC 201 GGGTCGTCTG AAAGACAGTT TTTCCACACT
GTCAGACAAC GATACAGCCC 251 TTGTCGGTAC GAATATCGTC TATGCCGCCA
TCCACAACTT CGGCGGTATG 301 GCGGGGCGCA ACCGCAAAGT TCGGATTCCG
CAACGGGAAT TTTTGACGCT 351 GACGGACGAC GACAAACAGG CTTTGATGGA
CGATGTGCAG GATTATTTTT 451 CGGGTCTGAT ACCGTGA
This corresponds to the amino acid sequence <SEQ ID 2406; ORF
715.a>
TABLE-US-02848 a715.pep 1 MIDVKIDNIF VVLNQIERLG NGIENRYLLM
RRLSETMHTA VKLNFRYAGR 51 PKWLGLKYRD GKPLSDSGRL KDSFSTLSDN
DTALVGTNIV YAAIHNFGGM 101 AGRNRKVRIP QREFLTLTDD DKQALMDDVQ
DYFSGLIP*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2407>:
TABLE-US-02849 g716.seq 1 ATGAACAAAA ATATTGCTGC CGCACTCGCC
GGTGCTTTAT CCCTGTCTCT 51 GGCCGCCGGC GCCGTTGCCG CCCACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCAAAAATC CGCCCAAGGC TCTTGCGGCG
CATCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CATCCAAATC TGCCGAAGGT
TCGTGCGGCG CGGCTGCTTC 201 TAAAGCAGGC GAAGGCAAAT GCGGCGAGGG
CAAATGCGGT GCAACTGTAA 251 AAAAAGCCCA CAAACACACC AAAGCATCTA
AAGCCAAAGC CAAATCTGCC 301 GAAGGCAAAT GCGGCGAAGG CAAATGCGGT
TCTAAATAA
This corresponds to the amino acid sequence <SEQ ID 2408; ORF
716.ng>:
TABLE-US-02850 g716.pep 1 MNKNIAAALA GALSLSLAAG AVAAHKPASN
ATGVQKSAQG SCGASKSAEG 51 SCGASKSAEG SCGAAASKAG EGKCGEGKCG
ATVKKAHKHT KASKAKAKSA 101 EGKCGEGKCG SK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2409>:
TABLE-US-02851 m716.seq 1 ATGAACAAAA ACATTGCTGC CGCTCTCGCC
GGTGCTTTAT CCCTGTCTTT 51 GGCCGCCGGT GCAGTTGCTG CCAACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCATAAATC CGCCCATGGC TCTTGCGGCG
CGTCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CGGCTGGTTC TAAAGCAGGC
GAAGGCAAAT GCGGCGAGGG 201 CAAATGCGGT GCGACCGTAA AAAAAACCCA
CAAACACACC AAAGCATCTA 251 AAGCCAAGGC CAAATCTGCC GAAGGCAAAT
GCGGCGAAGG CAAATGCGGT 301 TCTAAATAA
This corresponds to the amino acid sequence <SEQ ID 2410; ORF
716>:
TABLE-US-02852 m716.pep 1 MNKNIAAALA GALSLSLAAG AVAANKPASN
ATGVHKSAHG SCGASKSAEG 51 SCGAAGSKAG EGKCGEGKCG ATVKKTHKHT
KASKAKAKSA EGKCGEGKCG 101 SK* m716/g716 86.6% identity in 112 aa
overlap 10 20 30 40 50 m716.pep
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGA------
||||||||||||||||||||||||:|||||||||:|||:||||||||||||||| g716
MNKNIAAALAGALSLSLAAGAVAAHKPASNATGVQKSAQGSCGASKSAEGSCGASKSAEG 10 20
30 40 50 60 60 70 80 90 100 m716.pep
----AGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSKX
|:|||||||||||||||||||:||||||||||||||||||||||||||| g716
SCGAAASKAGEGKCGEGKCGATVKKAHKHTKASKAKAKSAEGKCGEGKCGSKX 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2411>:
TABLE-US-02853 a716.seq 1 ATGAACAAAA ACATTGCTGC CGCACTCGCC
GGTGCTTTAT CCCTGTCTTT 51 GGCCGCCGGT GCAGTTGCTG CCAACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCATAAATC CGCCCATGGC TCTTGCGGCG
CGTCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CGGCTGGTTC TAAAGCAGGC
GAAGGCAAAT GCGGCGAGGG 201 CAAATGCGGT GCGACCGTAA AAAAAACCCA
CAAACACACC AAAGCATCTA 251 AAGCCAAGGC CAAATCTGCC GAAGGCAAAT
GCGGCGAAGG CAAATGCGGT 301 TCTAAATAA
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2412.a>:
TABLE-US-02854 a716.pep 1 MNKNIAAALA GALSLSLAAG AVAANKPASN
ATGVHKSAHG SCGASKSAEG 51 SCGAAGSKAG EGKCGEGKCG ATVKKTHKHT
KASKAKAKSA EGKCGEGKCG 101 SK* a716/m716 100.0% identity in 102 aa
overlap 10 20 30 40 50 60 a716.pep
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGAAGSKAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m716
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGAAGSKAG 10 20
30 40 50 60 70 80 90 100 a716.pep
EGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSKX
||||||||||||||||||||||||||||||||||||||||||| m716
EGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSKX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2413>:
TABLE-US-02855 g717.seq 1 ATGGACACAA AAGAAATCCT CGGCTACGCG
GCAGGCTCGA TCGGCAGCGC 51 GGTTTTAGCC GTCATCATCC TGCCGCTGCT
GTCGTGGTAT TTCcccgCCG 101 ACGACATCGG GCGCATCGTG CTGATGCAGA
CGGCGGCGGG ACTGACGGTG 151 TCGGTATTGT GCCTCGGGCT GGATCAGGCA
TACGTCCGCG AATACTATGC 201 CGCCGCCGAC AAAGACACTT TGTTCAAAAC
CCTGTTCCTG CCGCCGCTGC 251 TGTTTTCCGC CGCGATAGCC GCCCTGCTGC
TTTCCCGCCC GTCCCTGCCG 301 TCTGAAATCC TGTTTTCGCT CGACGATGCC
GCCGCCGGCA TCGGGCTGGT 351 GCTGTTTGAA CTGAGCTTCC TGCCCATCCG
CTTTCTCTTA CTGGTTTTGC 401 GTATGGAAGG GCGCGCCCTT GCCTTTTCGT
CCGCGCAACT CGTGCCCAAA 451 CTCGCCATTC TGCTGCTGTT GCCGCTGACG
GTCGGGCTGC TGCACTTTCC 501 GGCGAACACC TCCGTCCTGA CCGCCGTTTA
CGCGCTGGCA AACCTTGCCG 551 CCGCCGCCTT TTTGCTGTTT CAAAACCGAT
GCCGTCTGAA GGCCGTCCGG 601 CGCGCGCCGT TTTCGCCCGC CGTCCTGCAC
CGGGGGCTGC GCTACGGCAT 651 ACCGCTCGCA CTGAGCAGCC TTGCCTATTG
GGGGCTGGCA TCCGCCGACC 701 GTTTGTTCCT GAAAAAATAT GCGGGCCTGG
AACAGCTCGG CGTTTATTCG 751 ATGGGTATTT CGTTCGGCGG GGCGGCATTA
TTGCTCCAAA GCATCTTTTC 801 AACGGTCTGG ACACCGTATA TTTTCCGTGC
AATCGAAGAA AACGCCACGC 851 CCGCCCGCCT CTCGGCAACG GCAGAATCCG
CCGCCGCCCT GCTTGCCTCC 901 GCCCTCTGCC TGACCGGAAT TTTCTCGCCC
CTCGCCTCCC TCCTGCTGCC 951 GGAAAACTAC GCCGCCGTCC GGTTTACCGT
CGTATCGTGT ATGCTGccgc 1001 cgctGTTTTA CACGCTGACC GAAATCAGCG
GCATCGGTTT GAACGTCGTC 1051 CGCAAAACGC GTCCGATCGC GCTTGCCACC
TTGGGCGCGC TGGCGGCAAA 1101 CCTGCTGCTG CTGGGGCTTG CCGTACCGTC
CGGCGGCACG CGCGGCGCGG 1151 CGGTTGCCTG TGCCGCCTCA TTCTGGTTGT
TTTTTGTTTT CAAGACAGAA 1201 AGCTCCTGCC GCCTGTGGCA GCCGCTCAAA
CGCCTGCCGC TTTATATGCA 1251 CACATTGTTC TGCCTgGCCT CCTCGGCGGC
CTACACCTGC TTCGGCACAC 1301 CGGCAAACTA CCCcctgttt gccggcgtAT
GGGCGGCATA TCTGGCAGGC 1351 TGCATCCTGC GCCACCGGAA AAATTTGCAC
AAACTGTTTC ATTATTTGAA 1401 AAAACAAGGT TTCCCATTAT GA
This corresponds to the amino acid sequence <SEQ ID 2414; ORF
717.ng>:
TABLE-US-02856 g717.pep 1 MDTKEILGYA AGSIGSAVLA VIILPLLSWY
FPADDIGRIV LMQTAAGLTV 51 SVLCLGLDQA YVREYYAAAD KDTLFKTLFL
PPLLFSAAIA ALLLSRPSLP 101 SEILFSLDDA AAGIGLVLFE LSFLPIRFLL
LVLRMEGRAL AFSSAQLVPK 151 LAILLLLPLT VGLLHFPANT SVLTAVYALA
NLAAAAFLLF QNRCRLKAVR 201 RAPFSPAVLH RGLRYGIPLA LSSLAYWGLA
SADRLFLKKY AGLEQLGVYS 251 MGISFGGAAL LLQSIFSTVW TPYIFRAIEE
NATPARLSAT AESAAALLAS 301 ALCLTGIFSP LASLLLPENY AAVRFTVVSC
MLPPLFYTLT EISGIGLNVV 351 RKTRPIALAT LGALAANLLL LGLAVPSGGT
RGAAVACAAS FWLFFVFKTE 401 SSCRLWQPLK RLPLYMHTLF CLASSAAYTC
FGTPANYPLF AGVWAAYLAG 451 CILRHRKNLH KLFHYLKKQG FPL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2415>:
TABLE-US-02857 m717.seq 1 ATGGACACAA AAGAAATCCT CGGCTACGCG
GCAGGCTCGA TCGGCAGCGC 51 GGTTTTAGCC GTCATCATCC TGCCGCTGCT
GTCGTGGTAT TTCCCCGCCG 101 ACGACATCGG GCGCATCGTG CTGATGCAGA
CGGCGGCGGG GCTGACGGTG 151 TCGGTGTTGT GCCTCGGGCT GGATCAGGCA
TACGTCCGCG AATACTATGC 201 CACCGCCGAC AAAGACACCT TGTTCAAAAC
CCTGTTCCTG CCGCCGCTGC 251 TGTCTGCCGC CGCGATAGCC GCCCTGCTGC
TTTCCCGCCC GTCCCTGCCG 301 TCTGAAATCC TGTTTTCACT CGACGATGCC
GCCGCCGGCA TCGGGCTGGT 351 GCTGTTTGAA CTGAGCTTCC TGCCCATCCG
CTTTCTCTTA CTGGTTTTGC 401 GTATGGAAGG ACGCGCCCTT GCCTTTTCGT
CCGCGCAACT CGTGCCCAAG 451 CTCGCCATCC TGCTGCTGCT GCCGCTGACG
GTCGGGCTGC TGCACTTTCC 501 AGCGAACACC GCCGTCCTGA CCGCCGTTTA
CGCGCTGGCA AACCTTGCCG 551 CCGCCGCCTT TTTGCTGTTT CAAAACCGAT
GCCGTCTGAA GGCCGTCCGG 601 CACGCACCGT TTTCGCCCGC CGTCCTGCAC
CGGGGGCTGC GCTACGGCAT 651 ACCGATCGCA CTGAGCAGCA TCGCCTATTG
GGGGCTGGCA TCCGCCGACC 701 GTTTGTTCCT GAAAAAATAT GCCGGCCTGG
AACAGCTCGG CGTTTATTCG 751 ATGGGTATTT CGTTCGGCGG GGCGGCATTA
TTGTTCCAAA GCATCTTTTC 801 AACGGTCTGG ACACCGTATA TTTTCCGCGC
AATCGAAGAA AACGCCCCGC 851 CCGCCCGCCT CTCGGCAACG GCAGAATCCG
CCGCCGCCCT GCTTGCCTCC 901 GCCCTCTGCC TGACCGGCAT TTTCTCGCCC
CTTGCCTCCC TCCTGCTGCC 951 GGAAAACTAC GCCGCCGTCC GGTTTATCGT
CGTATCGTGT ATGCTGCCGC 1001 CGCTGTTTTG CACGCTGGCG GAAATCAGCG
GCATCGGTTT GAACGTCGTC 1051 CGCAAAACGC GCCCGATCGC GCTCGCCACC
TTGGGCGCGC TGGCGGCAAA 1101 CCTGCTGCTG CTGGGGCTTG CCGTGCCGTC
CGGCGGCGCG CGCGGCGCGG 1151 CGGTTGCCTG TGCCGCCTCA TTCTGGCTGT
TTTTTGCCTT CAAGACCGAA 1201 AGCTCCTGCC GCCTGTGGCA GCCGCTCAAA
CGCCTGCCGC TTTATCTGCA 1251 CACATTGTTC TGCCTGACCT CCTCGGCGGC
CTACACCTGC TTCGGCACGC 1301 CGGCAAACTA TCCCCTGTTT GCCGGCGTAT
GGGCGGCATA TCTGGCAGGC 1351 TGCATCCTGC GCCACCGGAA AGATTTGCAC
AAACTGTTTC ATTATTTGAA 1401 AAAACAAGGT TTCCCATTAT GA
This corresponds to the amino acid sequence <SEQ ID 2416; ORF
717>:
TABLE-US-02858 m717.pep 1 MDTKEILGYA AGSIGSAVLA VIILPLLSWY
FPADDIGRIV LMQTAAGLTV 51 SVLCLGLDQA YVREYYATAD KDTLFKTLFL
PPLLSAAAIA ALLLSRPSLP 101 SEILFSLDDA AAGIGLVLFE LSFLPIRFLL
LVLRMEGRAL AFSSAQLVPK 151 LAILLLLPLT VGLLHFPANT AVLTAVYALA
NLAAAAFLLF QNRCRLKAVR 201 HAPFSPAVLH RGLRYGIPIA LSSIAYWGLA
SADRLFLKKY AGLEQLGVYS 251 MGISFGGAAL LFQSIFSTVW TPYIFRAIEE
NAPPARLSAT AESAAALLAS 301 ALCLTGIFSP LASLLLPENY AAVRFIVVSC
MLPPLFCTLA EISGIGLNVV 351 RKTRPIALAT LGALAANLLL LGLAVPSGGA
RGAAVACAAS FWLFFAFKTE 401 SSCRLWQPLK RLPLYLHTLF CLTSSAAYTC
FGTPANYPLF AGVWAAYLAG 451 CILRHRKDLH KLFHYLKKQG FPL* m717/g717
96.4% identity in 473 aa overlap 10 20 30 40 50 60 m717.pep
MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQTAAGLTVSVLCLGLDQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g717
MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQTAAGLTVSVLCLGLDQA 10 20
30 40 50 60 70 80 90 100 110 120 m717.pep
YVREYYATADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSEILFSLDDAAAGIGLVLFE
|||||||:|||||||||||||||| :|||||||||||||||||||||||||||||||||| g717
YVREYYAAADKDTLFKTLFLPPLLFSAAIAALLLSRPSLPSEILFSLDDAAAGIGLVLFE 70 80
90 100 110 120 130 140 150 160 170 180 m717.pep
LSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLTVGLLHFPANTAVLTAVYALA
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g717
LSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLTVGLLHFPANTSVLTAVYALA 130
140 150 160 170 180 190 200 210 220 230 240 m717.pep
NLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIPIALSSIAYWGLASADRLFLKKY
||||||||||||||||||||:|||||||||||||||||:||||:|||||||||||||||| g717
NLAAAAFLLFQNRCRLKAVRRAPFSPAVLHRGLRYGIPLALSSLAYWGLASADRLFLKKY 190
200 210 220 230 240 250 260 270 280 290 300 m717.pep
AGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRAIEENAPPARLSATAESAAALLAS
|||||||||||||||||||||:|||||||||||||||||||| ||||||||||||||||| g717
AGLEQLGVYSMGISFGGAALLLQSIFSTVWTPYIFRAIEENATPARLSATAESAAALLAS 250
260 270 280 290 300 310 320 330 340 350 360 m717.pep
ALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPLFCTLAEISGIGLNVVRKTRPIALAT
||||||||||||||||||||||||| |||||||||| ||:|||||||||||||||||||| g717
ALCLTGIFSPLASLLLPENYAAVRFTVVSCMLPPLFYLLTEISGIGLNVVRKTRPIALAT 310
320 330 340 350 360 370 380 390 400 410 420 m717.pep
LGALAANLLLLGLAVPSGGARGAAVACAASFWLFFAFKTESSCRLWQPLKRLPLYLHTLF
|||||||||||||||||||:|||||||||||||||:|||||||||||||||||||:|||| g717
LGALAANLLLLGLAVPSGGTRGAAVACAASFWLFFVFKTESSCRLWQPLKRLPLYMHTLF 370
380 390 400 410 420 430 440 450 460 470 m717.pep
CLTSSAAYTCFGTPANYPLFAGVKAAYLAGCILRHRKDLHKLFHYLKKQGFPLX
||:||||||||||||||||||||||||||||||||||:|||||||||||||||| g717
CLASSAAYTCFGTPANYPLFAGVKAAYLAGCILRHRKNLHKLFHYLKKQGFPLX 430 440 450
460 470
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2417>:
TABLE-US-02859 a717.seq 1 ATGGACACAA AAGAAATCCT CGGCTACGCG
GCAGGCTCGA TCGGCAGCGC 51 GGTTTTAGCC GTCATCATCC TGCCGCTGCT
GTCGTGGTAT TTCCCTGCCG 101 ACGACATCGG ACGCATCGTG CTGATGCAGA
CGGCGGCGGG GCTGACGGTG 151 TCGGTGTTGT GCCTCGGGCT GGATCAGGCA
TACGTCCGCG AATACTATGC 201 CGCCGCCGAC AAAGACACTT TGTTCAAAAC
CCTGTTCCTG CCGCCGCTGC 251 TGTCTGCCGC CGCGATAGCC GCCCTGCTGC
TTTTCCGCGC ATCCCTGCCG 301 TCTGAAATCC TGTTTTCGCT CGACGATGCC
GCCGCCGGCA TCGGGCTGGT 351 GCTGTTTGAA CTGAGCTTCC TGCCCATCCG
CTTTCTCTTA CTGGTTTTGC 401 GTATGGAAGG ACGCGCCCTT GCCTTTTCGT
CCGCGCAACT CGTGTCCAAG 451 CTCGCCATCC TGCTGCTGCT GCCGCTGACG
GTCGGGCTGC TGCACTTTCC 501 GGCGAACACC GCCGTCCTGA CCGCCGTTTA
CGCGCTGGCA AACCTTGCCG 551 CCGCCGCCTT TTTGCTGTTT CAAAACCGAT
GCCGTCTGAA GGCCGTCCGG 601 CGCGCACCGT TTTCATCCGC CGTCCTGCAT
CGCGGCCTGC GCTACGGCAT 651 ACCGATCGCA CTAAGCAGCA TCGCCTATTG
GGGGCTGGCA TCCGCCGACC 701 GTTTGTTCCT GAAAAAATAT GCCGGCCTAG
AACAGCTCGG CGTTTATTCG 751 ATGGGTATTT CGTTCGGCGG AGCGGCATTA
TTGTTCCAAA GCATCTTTTC 801 AACGGTCTGG ACACCGTATA TTTTCCGCGC
AATCGAAGCA AACGCCCCGC 851 CCGCCCGCCT CTCGGCAACG GCAGAATCCG
CCGCCGCCTT GCTTGCCTCC 901 GCCCTCTGCC TGACCGGCAT TTTCTCGCCC
CTCGCCTCCC TCCTGCTGCC 951 GGAAAACTAC GCCGCCGTCC GGTTTATCGT
CGTATCGTGT ATGCTGCCTC 1001 CGCTGTTTTG CACGCTGGTA GAAATCAGCG
GCATCGGTTT GAACGTCGTC 1051 CGAAAAACAC GCCCGATCGC GCTCGCCACC
TTGGGCGCGC TGGCGGCAAA 1101 CCTGCTGCTG CTGGGGCTTG CCGTACCGTC
CGGCGGCGCG CGCGGCGCGG 1151 CGGTTGCCTG TGCCGCCTCA TTTTGGCTGT
TTTTTGTTTT CAAGACCGAA 1201 AGCTCCTGCC GCCTGTGGCA GCCGCTCAAA
CGCCTGCCGC TTTATATGCA 1251 CACATTGTTC TGCCTGGCCT CCTCGGCGGC
CTACACCTGC TTCGGCACTC 1301 CGGCAAACTA CCCCCTGTTT GCCGGCGTAT
GGGCGGTATA TCTGGCAGGC 1351 TGCATCCTGC GCCACCGGAA AGATTTGCAC
AAACTGTTTC ATTATTTGAA 1401 AAAACAAGGT TTCCCATTAT GA
This corresponds to the amino acid sequence <SEQ ID 2418; ORF
717.a>:
TABLE-US-02860 a717.pep 1 MDTKEILGYA AGSIGSAVLA VIILPLLSWY
FPADDIGRIV LMQTAAGLTV 51 SVLCLGLDQA YVREYYAAAD KDTLFKTLFL
PPLLSAAAIA ALLLSRPSLP 101 SEILFSLDDA AAGIGLVLFE LSFLPIRFLL
LVLRMEGRAL AFSSAQLVSK 151 LAILLLLPLT VGLLHFPANT AVLTAVYALA
NLAAAAFLLF QNRCRLKAVR 201 RAPFSSAVLH RGLRYGIPIA LSSIAYWGLA
SADRLFLKKY AGLEQLGVYS 251 MGISFGGAAL LFQSIFSTVW TPYIFRAIEA
NAPPARLSAT AESAAALLAS 301 ALCLTGIFSP LASLLLPENY AAVRFIVVSC
MLPPLFCTLV EISGIGLNVV 351 RKTRPIALAT LGALAANLLL LGLAVPSGGA
RGAAVACAAS FWLFFVFKTE 401 SSCRLWQPLK RLPLYMHTLF CLASSAAYTC
FGTPANYPLF AGVWAVYLAG 451 CILRHRKDLH KLFHYLKKQG FPL* a717/m717
97.9% identity in 473 aa overlap 10 20 30 40 50 60 a717.pep
MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQTAAGLTVSVLCLGLDQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m717
MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQTAAGLTVSVLCLGLDQA 10 20
30 40 50 60 70 80 90 100 110 120 a717.pep
YVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSEILFSLDDAAAGIGLVLFE
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| m717
YVREYYATADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSEILFSLDDAAAGIGLVLFE 70 80
90 100 110 120 130 140 150 160 170 180 a717.pep
LSFLPIRFLLLVLRMEGRALAFSSAQLVSKLAILLLLPLTVGLLHFPANTAVLTAVYALA
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| m717
LSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLTVGLLHFPANTAVLTAVYALA 130
140 150 160 170 180 190 200 210 220 230 240 a717.pep
NLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPIALSSIAYWGLASADRLFLKKY
||||||||||||||||||||:|||| |||||||||||||||||||||||||||||||||| m717
NLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIPIALSSIAYWGLASADRLFLKKY 190
200 210 220 230 240 250 260 270 280 290 300 a717.pep
AGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRAIEANAPPARLSATAESAAALLAS
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| m717
AGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRAIEENAPPARLSATAESAAALLAS 250
260 270 280 290 300 310 320 330 340 350 360 a717.pep
ALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPLFCTLVEISGIGLNVVRKTRPIALAT
|||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||| m717
ALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPLFCTLAEISGIGLNVVRKTRPIALAT 310
320 330 340 350 360 370 380 390 400 410 420 a717.pep
LGALAANLLLLGLAVPSGGARGAAVACAASFWLFFVFKTESSCRLWQPLKRLPLYMHTLF
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||:|||| m717
LGALAANLLLLGLAVPSGGARGAAVACAASFWLFFAFKTESSCRLWQPLKRLPLYLHTLF 370
380 390 400 410 420 430 440 450 460 470 a717.pep
CLASSAAYTCFGTPANYPLFAGVWAVYLAGCILRHRKDLHKLFHYLKKQGFPLX
||:||||||||||||||||||||||:|||||||||||||||||||||||||||| m717
CLTSSAAYTCFGTPANYPLFAGVWAAYLAGCILRHRKDLHKLFHYLKKQGFPLX 430 440 450
460 470
[0347] g718.seq not found yet
[0348] g718.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2419>:
TABLE-US-02861 m718.seq 1 TCAGACGGCC TTTACGTACC CCGAAACTTT
ATCCACCGCC CGCAAAGCTG 51 GTTCAAATGG GACAAAGACA ACGGGCTGCT
GCTGCGTACC CGCGAAAATC 101 CGGAAGGCGA AGCGTTGTGG CCGCTGGGCT
GGGTCGTTCA TACCCAAAAA 151 TCGCGCAGCG TCCAGCAGGC GCGCAACGGG
CTTTTCCGCA CGCTTTCCTG 201 GCTGTATATG TTCAAACACT ACGCCGTCCA
CGATTTTGCC GAGTTTTTGG 251 AGCTGTACGG CATGCCCATC CGTATCGGCA
AATACGGCGC GGGCGCAACC 301 AAAGAGGAAA AAAACACCCT GCTTCGAGCG
GTGGCGGAAA TCGGTCACAA 351 CGCGGCAGGC ATCATGCCAG AAGGTATGGA
AATAGAGCTC CACAACGCGG 401 CAAACGGTAC GACGGCAACC AGCAATCCGT
TTTTGCAGAT GGCCGACTGG 451 TGCGAAAAAT CGGCGGCGCG GCTGATTTTG
GGGCAAACGC TGACCAGCGG 501 TGCGGACGGA AAATCCAGCA CCAACGCGCT
GGGCAATATC CACAACGAGG 551 TACGCCGCGA TTTGCTGGTG TCGGACGCAA
AACAGGTGGC GCAAACCATC 601 ACAAGCCAAA TCATCGGACC GTTCCTGCAA
ATCAACTATC CCCATGCCGA 651 CCCAAACCGC GTGCCGAAAT TTGAATTTGA
CACGCGCGAG CCGAAAGACA 701 TCGCGGTCTT TGCCGACGCT ATCCCGAAAC
TGGTGGATGT CGGCGTACAA 751 ATCCCCGAAA GCTGGGTGCG CGACAAACTG
GTCATTCCAG ATGTGCAGGA 801 GGGTGAGGCT GTGTTGGTGC GGCAGGTACC
GGACAATCCG GTAAACAGAA 851 CTGCATTGGC GGCTTTATCC GCCCACACCG
TACCATCTAA GGCTACGGGC 901 AGGCATCAGG AAATATTGGA CGGCGCGTTG
GATGACGCGC TGGTTGAGCC 951 CGATTTCAAT TCTCAGCTCA ACCCGATGGT
GCGTCAGGCG GTTGCCGCAC 1001 TTAATGCTTG CAACAGCTAC GAGGAGGCAG
ATGCCGCACT GAATGCGCTT 1051 TATCCGAATT TGGACAACGC GAAACTGCGT
ACCTATATGC AGCAGGCCTT 1101 GTTTATCAGC GATATTTTGG GACAAGACCA
TGCCCGCGCC TGA
This corresponds to the amino acid sequence <SEQ ID 2420; ORF
718>:
TABLE-US-02862 m718.pep 1 SDGLYVPRNF IHRPQSWFKW DKDNGLLLRT
RENPEGEALW PLGWVVHTQK 51 SRSVQQARNG LFRTLSWLYM FKHYAVHDFA
EFLELYGMPI RIGKYGAGAT 101 KEEKNTLLRA VAEIGHNAAG IMPEGMEIEL
HNAANGTTAT SNPFLQMADW 151 CEKSAARLIL GQTLTSGADG KSSTNALGNI
HNEVRRDLLV SDAKQVAQTI 201 TSQIIGPFLQ INYPHADPNR VPKFEFDTRE
PKDIAVFADA IPKLVDVGVQ 251 IPESWVRDKL VIPDVQEGEA VLVRQVPDNP
VNRTALAALS AHTVPSKATG 301 RHQEILDGAL DDALVEPDFN SQLNPMVRQA
VAALNACNSY EEADAALNAL 351 YPNLDNAKLR TYMQQALFIS DILGQDHARA *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2421>:
TABLE-US-02863 a718.seq 1 ATGGAGCCGA TAATGGCAAA AAAGAACAAT
AAAACTAAAA TCCAAAAGCC 51 CGAAGCTGCA TTGCAGACGG ACGTGGCTCA
AATTACAGCG ACCGGTCGAG 101 TTATCGCCGA GCATCCATCC AATTTTATTA
CGCCGCAAAA GATGCGCGCC 151 CTCTTCGAGG ACGCAGAAAG CGGTGACATC
CGCGCCCAAC ACGAGCTTTT 201 CGCGGACATT GAGGAGCGCG ACAGCGACAT
CGCGGCAAAT ATGGGGACGC 251 GCAAACGCGC GCTGCTGACG CTCAACTGGC
GCGTCGCCCC GCCGCGAAAT 301 GCGACGCCCG AAGAAGAAAA GCTGTCCGAC
CAAGCCTACG AAATGATGGA 351 CAGCCTGCCT ACCCTCGAAG ACCTGATTAT
GGATTTGATG GACGCGGTAG 401 GGCACGGATT TTCTGCGTTG GAGGTCGAGT
GGGTATTTTC AGACGGCCTT 451 TACCTACCCC GAAACTTTAT CCACCGCCCG
CAAAGCTGGT TCAAATGGGA 501 CAAAGACAAC GGGCTGCTGC TGCGTACCCG
CGAAAATCCG GAAGGCGAAG 551 CGTTGTGGCC GCTGGGCTGG GTCGTTCATA
CCCAAAAATC GCGCAGCGTC 601 CAGCAGGCGC GCAACGGGCT TTTCCGCACG
CTTTCCTGGC TGTATATGTT 651 CAAACACTAC GCCGTCCACG ATTTTGCCGA
GTTTTTGGAG CTGTACGGCA 701 TGCCCATCCG TATCGGCAAA TACGGCGCGG
GCGCAACCAA AGAGGAAAAA 751 AACACCCTGC TTCGAGCGGT GGCGGAAATC
GGTCACAACG CGGCAGGCAT 801 CATGCCAGAA GGTATGGAAA TCGAGCTGCA
CAACGCGGCA AACGGCATGA 851 CTTCCGCCGG CAATCCGTTT TTGCAGATGG
CCGACTGGTG CGAAAAATCG 901 GCGGCGCGGC TGATTTTGGG GCAAACGCTA
ACCAGCGGTG CGGACGGAAA 951 ATCCAGCACC AACGCGCTGG GCAATATCCA
CAACGAGATA CGCCGCGATT 1001 TGCTGGTGTC GGACGCAAAA CAGGTGGCGC
AAACCATCAC AAGCCAAATC 1051 ATCGGACCGT TCCTGCAAAT CAACTATCCC
CATGCCGACC CAAACCGCGT 1101 GCCGAAATTT GAATTTGACA CGCGCGAGCC
GAAAGACATC GCGGTCTTTG 1151 CCGACGCTAT CCCGAAACTG GTGGATGTCG
GCGTACAAAT CCCCGAAAGC 1201 TGGGTGCGCG ACAAACTGGT CATTCCAGAT
GTGCAGGAGG GTGAGGCTGT 1251 GTTGGTGCGG CAGGTACCGG ACAATCCGGT
AAACAGAACT GCATTGGCGG 1301 CTTTATCCGC CCACACCGTA CCATCTAAGG
CTACGGGCAG GCATCAGGAA 1351 ATATTGGACG GCGCGTTGGA TGACGCGCTG
GTTGAGCCCG ATTTCAATTC 1401 TCAGCTCAAC CCGATGGTGC GTCAGGCGGT
TGCCGCACTT AATGCTTGCA 1451 ACAGCTACGA GGAGGCAGAT GCCGCACTGA
ATGCGCTTTA TCCGAATTTG 1501 GACAACGCGA AACTGCGTAC CTATATGCAG
CAGGCCTTGT TTATCAGCGA 1551 TATTTTGGGA CAAGACCATG CCCGCGCCTG A
This corresponds to the amino acid sequence <SEQ ID 2422; ORF
718.a>:
TABLE-US-02864 a718.pep 1 MEPIMAKKNN KTKIQKPEAA LQTDVAQITA
TGRVIAEHPS NFITPQKMRA 51 LFEDAESGDI RAQHELFADI EERDSDIAAN
MGTRKRALLT LNWRVAPPRN 101 ATPEEEKLSD QAYEMMDSLP TLEDLIMDLM
DAVGHGFSAL EVEWVFSDGL 151 YLPRNFIHRP QSWFKWDKDN GLLLRTRENP
EGEALWPLGW VVHTQKSRSV 201 QQARNGLFRT LSWLYMFKHY AVHDFAEFLE
LYGMPIRIGK YGAGATKEEK 251 NTLLRAVAEI GHNAAGIMPE GMEIELHNAA
NGMTSAGNPF LQMADWCEKS 301 AARLILGQTL TSGADGKSST NALGNIHNEI
RRDLLVSDAK QVAQTITSQI 351 IGPFLQINYP HADPNRVPKF EFDTREPKDI
AVFADAIPKL VDVGVQIPES 401 WVRDKLVIPD VQEGEAVLVR QVPDNPVNRT
ALAALSAHTV PSKATGRHQE 451 ILDGALDDAL VEPDFNSQLN PMVRQAVAAL
NACNSYEEAD AALNALYPNL 501 DNAKLRTYMQ QALFISDILG QDHARA* a718/m718
98.4% identity in 380 aa overlap 120 130 140 150 160 170 a718.pep
DSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWFKWDKDNGLLLRT
|||||:|||||||||||||||||||||||| m718 SDGLYVPRNFIHRPQSWFKWDKDNGLLLRT
10 20 30 180 190 200 210 220 230 a718.pep
RENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAVHDFAEFLELYGMPI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718
RENPEGEALWPLGWVVHIQKSRSVQQARNGLFRTLSWLYMFKHYAVHDFAEFLELYGMPI 40 50
60 70 80 90 240 250 260 270 280 290 a718.pep
RIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAANGMTSAGNPFLQMADW
|||||||||||||||||||||||||||||||||||||||||||||| |:::||||||||| m718
RIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAANGTTATSNPFLQMADW 100
110 120 130 140 150 300 310 320 330 340 350 a718.pep
CEKSAARLILGQTLTSGADGKSSTNALGNIHNEIRRDLLVSDAKQVAQTITSQIIGPFLQ
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| m718
CEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSDAKQVAQTITSQIIGPFLQ 160
170 180 190 200 210 360 370 380 390 400 410 a718.pep
INYPHADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQIPESWVRDKLVIPDVQEGEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718
INYPHADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQIPESWVRDKLVIPDVQEGEA 220
230 240 250 260 270 420 430 440 450 460 470 a718.pep
VLVRQVPDNPVNRTALAALSAHTVPSKATGRHQEILDGALDDALVEPDFNSQLNPMVRQA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718
VLVRQVPDNPVNRTALAALSAHTVPSKATGRHQEILDGALDDALVEPDFNSQLNPMVRQA 280
290 300 310 320 330 480 490 500 510 520 a718.pep
VAALNACNSYEEADAALNALYPNLDNAKLRTYMQQALFISDILGQDHARAX
||||||||||||||||||||||||||||||||||||||||||||||||||| m718
VAALNACNSYEEADAALNALYPNLDNAKLRTYMQQALFISDILGQDHARAX 340 350 360 370
380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2423>:
TABLE-US-02865 m718-1.seq 1 ATGGAGCCGA TAATGGCAAA AAAGAACAAT
AAAACTAAAA TCCAAAAGCC 51 CGAAGCTGCA TTGCAGACGG ACGTGGCTCA
AATTACGGCG ACCGGTCGGG 101 TTATCGCCGA GCATCCGTCC AATTTTATTA
CGCCGCAAAA GATGCGGGCC 151 CTCTTCGAGG ACGCAGAAAG CGGCGACATC
CGCGCCCAAC ACGAGCTTTT 201 CGCGGACATT GAGGAGCGCG ACAGCGACAT
CGCGGCAAAT ATGGGGACGC 251 GCAAACGCGC GCTGCTGACG CTCAACTGGC
GCGTCGCCCC GCCGCGAAAT 301 GCGACGCCCG AAGAAGAAAA GCTGTCCGAC
CAAGCCTACG AAATGATGGA 351 CAGCCTGCCT ACCCTCGAAG ACCTGATTAT
GGATTTGATG GACGCGGTAG 401 GGCACGGATT TTCTGCGTTG GAGGTCGAGT
GGGTATTTTC AGACGGCCTT 451 TACCTACCCC GAAACTTTAT CCACCGCCCG
CAAAGCTGGT TCAAATGGGA 501 CAAAGACAAC GGGCTGCTGC TGCGTACCCG
CGAAAATCCG GAAGGCGAAG 551 CGTTGTGGCC GCTGGGCTGG GTCGTTCATA
CCCAAAAATC GCGCAGCGTC 601 CAGCAGGCGC GCAACGGGCT TTTCCGCACG
CTTTCCTGGC TGTATATGTT 651 CAAACACTAC GCCGTCCACG ATTTTGCCGA
GTTTTTGGAG CTGTACGGCA 701 TGCCCATCCG TATCGGCAAA TACGGCGCGG
GCGCAACCAA AGAGGAAAAA 751 AACACCCTGC TTCGAGCGGT GGCGGAAATC
GGTCACAACG CGGCAGGCAT 801 CATGCCAGAA GGTATGGAAA TAGAGCTCCA
CAACGCGGCA AACGGTACGA 851 CGGCAACCAG CAATCCGTTT TTGCAGATGG
CCGACTGGTG CGAAAAATCG 901 GCGGCGCGGC TGATTTTGGG GCAAACGCTG
ACCAGCGGTG CGGACGGAAA 951 ATCCAGCACC AACGCGCTGG GCAATATCCA
CAACGAGGTA CGCCGCGATT 1001 TGCTGGTGTC GGACGCAAAA CAGGTGGCGC
AAACCATCAC AAGCCAAATC 1051 ATCGGACCGT TCCTGCAAAT CAACTATCCC
CATGCCGACC CAAACCGCGT 1101 GCCGAAATTT GAATTTGACA CGCGCGAGCC
GAAAGACATC GCGGTCTTTG 1151 CCGACGCTAT CCCGAAACTG GTGGATGTCG
GCGTACAAAT CCCCGAAAGC 1201 TGGGTGCGCG ACAAACTGGT CATTCCAGAT
GTGCAGGAGG GTGAGGCTGT 1251 GTTGGTGCGG CAGGTACCGG ACAATCCGGT
AAACAGAACT GCATTGGCGG 1301 CTTTATCCGC CCACACCGTA CCATCTAAGG
CTACGGGCAG GCATCAGGAA 1351 ATATTGGACG GCGCGTTGGA TGACGCGCTG
GTTGAGCCCG ATTTCAATTC 1401 TCAGCTCAAC CCGATGGTGC GTCAGGCGGT
TGCCGCACTT AATGCTTGCA 1451 ACAGCTACGA GGAGGCAGAT GCCGCACTGA
ATGCGCTTTA TCCGAATTTG 1501 GACAACGCGA AACTGCGTAC CTATATGCAG
CAGGCCTTGT TTATCAGCGA 1551 TATTTTGGGA CAAGACCATG CCCGCGCCTG A
This corresponds to the amino acid sequence <SEQ ID 2424; ORF
718-1>:
TABLE-US-02866 m718-1.pep. 1 MEPIMAKKNN KTKIQKPEAA LQTDVAQITA
TGRVIAEHPS NFITPQKMRA 51 LFEDAESGDI RAQHELFADI EERDSDIAAN
MGTRKRALLT LNWRVAPPRN 101 ATPEEEKLSD QAYEMMDSLP TLEDLIMDLM
DAVGHGFSAL EVEWVFSDGL 151 YLPRNFIHRP QSWFKWDKDN GLLLRTRENP
EGEALWPLGW VVHTQKSRSV 201 QQARNGLFRT LSWLYMFKHY AVHDFAEFLE
LYGMPIRIGK YGAGATKEEK 251 NTLLRAVAEI GHNAAGIMPE GMEIELHNAA
NGTTATSNPF LQMADWCEKS 301 AARLILGQTL TSGADGKSST NALGNIHNEV
RRDLLVSDAK QVAQTITSQI 351 IGPFLQINYP HADPNRVPKF EFDTREPKDI
AVFADAIPKL VDVGVQIPES 401 WVRDKLVIPD VQEGEAVLVR QVPDNPVNRT
ALAALSAHTV PSKATGRHQE 451 ILDGALDDAL VEPDFNSQLN PMVRQAVAAL
NACNSYEEAD AALNALYPNL 501 DNAKLRTYMQ QALFISDILG QDHARA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2425>:
TABLE-US-02867 a718.seq 1 ATGGAGCCGA TAATGGCAAA AAAGAACAAT
AAAACTAAAA TCCAAAAGCC 51 CGAAGCTGCA TTGCAGACGG ACGTGGCTCA
AATTACAGCG ACCGGTCGAG 101 TTATCGCCGA GCATCCATCC AATTTTATTA
CGCCGCAAAA GATGCGCGCC 151 CTCTTCGAGG ACGCAGAAAG CGGTGACATC
CGCGCCCAAC ACGAGCTTTT 201 CGCGGACATT GAGGAGCGCG ACAGCGACAT
CGCGGCAAAT ATGGGGACGC 251 GCAAACGCGC GCTGCTGACG CTCAACTGGC
GCGTCGCCCC GCCGCGAAAT 301 GCGACGCCCG AAGAAGAAAA GCTGTCCGAC
CAAGCCTACG AAATGATGGA 351 CAGCCTGCCT ACCCTCGAAG ACCTGATTAT
GGATTTGATG GACGCGGTAG 401 GGCACGGATT TTCTGCGTTG GAGGTCGAGT
GGGTATTTTC AGACGGCCTT 451 TACCTACCCC GAAACTTTAT CCACCGCCCG
CAAAGCTGGT TCAAATGGGA 501 CAAAGACAAC GGGCTGCTGC TGCGTACCCG
CGAAAATCCG GAAGGCGAAG 551 CGTTGTGGCC GCTGGGCTGG GTCGTTCATA
CCCAAAAATC GCGCAGCGTC 601 CAGCAGGCGC GCAACGGGCT TTTCCGCACG
CTTTCCTGGC TGTATATGTT 651 CAAACACTAC GCCGTCCACG ATTTTGCCGA
GTTTTTGGAG CTGTACGGCA 701 TGCCCATCCG TATCGGCAAA TACGGCGCGG
GCGCAACCAA AGAGGAAAAA 751 AACACCCTGC TTCGAGCGGT GGCGGAAATC
GGTCACAACG CGGCAGGCAT 801 CATGCCAGAA GGTATGGAAA TCGAGCTGCA
CAACGCGGCA AACGGCATGA 851 CTTCCGCCGG CAATCCGTTT TTGCAGATGG
CCGACTGGTG CGAAAAATCG 901 GCGGCGCGGC TGATTTTGGG GCAAACGCTA
ACCAGCGGTG CGGACGGAAA 951 ATCCAGCACC AACGCGCTGG GCAATATCCA
CAACGAGATA CGCCGCGATT 1001 TGCTGGTGTC GGACGCAAAA CAGGTGGCGC
AAACCATCAC AAGCCAAATC 1051 ATCGGACCGT TCCTGCAAAT CAACTATCCC
CATGCCGACC CAAACCGCGT 1101 GCCGAAATTT GAATTTGACA CGCGCGAGCC
GAAAGACATC GCGGTCTTTG 1151 CCGACGCTAT CCCGAAACTG GTGGATGTCG
GCGTACAAAT CCCCGAAAGC 1201 TGGGTGCGCG ACAAACTGGT CATTCCAGAT
GTGCAGGAGG GTGAGGCTGT 1251 GTTGGTGCGG CAGGTACCGG ACAATCCGGT
AAACAGAACT GCATTGGCGG 1301 CTTTATCCGC CCACACCGTA CCATCTAAGG
CTACGGGCAG GCATCAGGAA 1351 ATATTGGACG GCGCGTTGGA TGACGCGCTG
GTTGAGCCCG ATTTCAATTC 1401 TCAGCTCAAC CCGATGGTGC GTCAGGCGGT
TGCCGCACTT AATGCTTGCA 1451 ACAGCTACGA GGAGGCAGAT GCCGCACTGA
ATGCGCTTTA TCCGAATTTG 1501 GACAACGCGA AACTGCGTAC CTATATGCAG
CAGGCCTTGT TTATCAGCGA 1551 TATTTTGGGA CAAGACCATG CCCGCGCCTG A
This corresponds to the amino acid sequence <SEQ ID 2426; ORF
718-1.a>:
TABLE-US-02868 a718.pep 1 MEPIMAKKNN KTKIQKPEAA LQTDVAQITA
TGRVIAEHPS NFITPQKMRA 51 LFEDAESGDI RAQHELFADI EERDSDIAAN
MGTRKRALLT LNWRVAPPRN 101 ATPEEEKLSD QAYEMMDSLP TLEDLIMDLM
DAVGHGFSAL EVEWVFSDGL 151 YLPRNFIHRP QSWFKWDKDN GLLLRTRENP
EGEALWPLGW VVHTQKSRSV 201 QQARNGLFRT LSWLYMFKHY AVHDFAEFLE
LYGMPIRIGK YGAGATKEEK 251 NTLLRAVAEI GHNAAGIMPE GMEIELHNAA
NGMTSAGNPF LQMADWCEKS 301 AARLILGQTL TSGADGKSST NALGNIHNEI
RRDLLVSDAK QVAQTITSQI 351 IGPFLQINYP HADPNRVPKF EFDTREPKDI
AVFADAIPKL VDVGVQIPES 401 WVRDKLVIPD VQEGEAVLVR QVPDNPVNRT
ALAALSAHTV PSKATGRHQE 451 ILDGALDDAL VEPDFNSQLN PMVRQAVAAL
NACNSYEEAD AALNALYPNL 501 DNAKLRTYMQ QALFISDILG QDHARA* a718/m718-1
99.0% identity in 526 aa overlap 10 20 30 40 50 60 a718.pep
MEPIMAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKMRALFEDAESGDI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
MEPIMAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKMRALFEDAESGDI 10 20
30 40 50 60 70 80 90 100 110 120 a718.pep
RAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEEKLSDQAYEMMDSLP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
RAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEEKLSDQAYEMMDSLP 70 80
90 100 110 120 130 140 150 160 170 180 a718.pep
TLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWFKWDKDNGLLLRTRENP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
TLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWFKWDKDNGLLLRTRENP 130
140 150 160 170 180 190 200 210 220 230 240 a718.pep
EGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAVHDFAEFLELYGMPIRIGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
EGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAVHDFAEFLELYGMPIRIGK 190
200 210 220 230 240 250 260 270 280 290 300 a718.pep
YGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAANGMTSAGNPFLQMADWCEKS
|||||||||||||||||||||||||||||||||||||||||| |:::||||||||||||| m718-1
YGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAANGTTATSNPFLQMADWCEKS 250
260 270 280 290 300 310 320 330 340 350 360 a718.pep
AARLILGQTLTSGADGKSSTNALGNIHNEIRRDLLVSDAKQVAQTITSQIIGPFLQINYP
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| m718-1
AARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSDAKQVAQTITSQIIGPFLQINYP 310
320 330 340 350 360 370 380 390 400 410 420 a718.pep
HADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQIPESWVRDKLVIPDVQEGEAVLVR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
HADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQIPESWVRDKLVIPDVQEGEAVLVR 370
380 390 400 410 420 430 440 450 460 470 480 a718.pep
QVPDNPVNRTALAALSAHTVPSKATGRHQEILDGALDDALVEPDFNSQLNPMVRQAVAAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m718-1
QVPDNPVNRTALAALSAHTVPSKATGRHQEILDGALDDALVEPDFNSQLNPMVRQAVAAL 430
440 450 460 470 480 490 500 510 520 a718.pep
NACNSYEEADAALNALYPNLDNAKLRTYMQQALFISDILGQDHARAX
||||||||||||||||||||||||||||||||||||||||||||||| m718-1
NACNSYEEADAALNALYPNLDNAKLRTYMQQALFISDILGQDHARAX 490 500 510 520
[0349] g719.seq not found yet
[0350] g719.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2427>:
TABLE-US-02869 m719.seq 1 ATGGCAAACG GGAACATGAA ACTGTCGTTG
GTGTTAACCG CCCGAGATGA 51 CGGAGCGAGA CGGCTACTGG CTGATACTCA
ACGACAATTA GATCGTACCG 101 CGAAATCGCG GGCGCAACTT GAACGGCAAA
GCCATACTTA TGCGTTGACC 151 GGCATCCGCT CAGAAAAACA GATTCAACGC
GAAATCATGC TGACACAGGC 201 TGCGTTTAAC CGTTTGGCGC GCAGCGGCAA
GGCATCACAA AATGATTTGG 251 CACGGGCGGC GGTCGCTACG CGTAACCGAA
TTCGCGAGCT GAACGCGGAA 301 CTGAAACAGG GCACGGGATT TGCGGACAAG
ATGGGAAAAA TCGGAAGATT 351 CGGTGCAGCT GCGGTGGCTG GTGGCGCGGC
AGCGTATACG GTGCTTAAGC 401 CTGCTATGGA CAACAGAAAG CAGCTTGATG
AGAACATCAA CCGCGTGTCC 451 AGACAGGCAT TTATTGAGGA TAACAGTAAA
TCGGCAGCGT GGATTGCAAC 501 TGAAGGTGCG CAACAGATCA AGGATTTGGC
ACTTGAACTT GTCGAGAAAA 551 ATGGCGGGAC CCACGATAAG GCTTTGGATT
TAATCAGCGG CATGATGACC 601 ACCGGTCTGA ATTTTGCCCA AACCAAGAAT
GAAGCGCAGG CGGCATATGC 651 TTTTGCACTT GCCTCAGAAG GCAGTGGCGA
GGATACGGCA AAACTGATTA 701 AAACCCTGAA AGATGGCGGC ATGAGCGGTA
AAGACCTGCA ACTCGGGCTT 751 GAGCACGTCT TGCAATCGGG TTTAGACGGC
ACTTTCGAGG TGCGGGATAT 801 GGTTCGGGAG CTGCCGAGCC TGCTCTCTGC
CGCGCAACAG GCAGGGATGA 851 ATGGTGTCGG CGGTTTGGAC TACCTGCTCT
CACTCTTACA ATCTGCGGCG 901 AATAAATCGG GCAGTCCTGC CGAAGCGGCG
ACTAATGTGC AAAATCTTTT 951 GAGTAAAACT CTGTCGCCTG ACACGATAGG
TCGTCTGAAG AAGATGGCAA 1001 ATCCGAATGA CCCGAAGAAA GGTGTCGATT
GGATAGGCTC GGTTGTGCAA 1051 GGCAAGCAAA ACGGCGAAAA CGCAGTGCAG
GTGTTGTCCC GTCTTGCCGA 1101 TGCCATGCTA GTAAAGGATA AGCAATACCA
AGATTATAAG AAACGCGCGG 1151 CTGCAGGCGA TAAGACGGCG GCGGAGCAGG
CAAATATGCT TAAGGGCGCG 1201 CTTTTGGCGC AACTGCTGCC TGATTTGCAG
GCAAAACAAG GTTTGCTGGC 1251 TGCAACGGAT ATGACGCAAA TCCGTGAATA
TATGGCTTCG TTGGCTGGCG 1301 TAACGTTGGA TAACGGAAAA ATTGCTAAGA
ACAACGAGGC GCGAATGTTG 1351 TCGGCAGCGG CGCAACAAGA GCAACAGGAA
TCGCTGGCAA TGTTGCGGGA 1401 AAGTCTGACG GGAACATTGG TGGATATGGA
AACCTCGTTT AAAAAGCTGG 1451 CAGCGGAATA CCCTAATGCC ACTCTAGCCC
TGCAAGCATT GACGACGGCG 1501 GCAACAGCGG CGTCTGCCGC AATGTTATTA
ACCGCCGGTG GCGGTAAAGG 1551 TGCAGGCTTT CTGAAAGATG TAGGTAGTAA
AGCGTTGGGA TGGGGTAAGG 1601 CTTCCGCAGG CGGCGTGGCA GCAGGTGCCA
CAGCGGCAGG CGGTAAGTTG 1651 CTGTCATGGG GAAAATCTGC CGGTAGCGGG
CTCATGAATA ATCCAGCGTT 1701 AGTTAAACGG GCGGGTTTGT TAGGTATGTT
GCTGTATTCC GAGTCTTTGG 1751 GTGACGGCAC ATTGCCAAAG GGTTTGCGTG
GTACCAAGAC AACTCCTGAA 1801 ATGATTAATC GTCTGAAAAA CAACGGTATC
CGATTTGAAC CTGCGCCGAA 1851 GCGGGAACAG GCGCGGGGTG GTGTCCCTCA
GTATTTGGCT GCTCCGTCAG 1901 CGCAGCCTAC CGATAAGATG TTGTCTCCGT
TGTTTTCAAC TCAGACGGCG 1951 GCGTATCAGG CAGCCATTCA GCAGCAGACG
GCGGCGTATC AGGCAGCATT 2001 GGCGCAGGAT ACGGCTGCAG TTACAACAGG
TTTGGCACAA GTGCAAAGTG 2051 CGATGGCGTC GGCAAGTCAG ACCATCAATA
CCAATGTGAG CCTGAATATC 2101 GACGGACGTG TTATCGCGAA TGAGGTATCG
CGGTATCAAG TGGCCATGTT 2151 CGGCCGTGGA GCGGGTCAAT AA
This corresponds to the amino acid sequence <SEQ ID 2428; ORF
719>:
TABLE-US-02870 m719.pep 1 MANGNMKLSL VLTARDDGAR RLLADTQRQL
DRTAKSRAQL ERQSHTYALT 51 GIRSEKQIQR EIMLTQAAFN RLARSGKASQ
NDLARAAVAT RNRIRELNAE 101 LKQGTGFADK MGKIGRFGAA AVAGGAAAYT
VLKPAMDNRK QLDENINRVS 151 RQAFIEDNSK SAAWIATEGA QQIKDLALEL
VEKNGGTHDK ALDLISGMMT 201 TGLNFAQTKN EAQAAYAFAL ASEGSGEDTA
KLIKTLKDGG MSGKDLQLGL 251 EHVLQSGLDG TFEVRDMVRE LPSLLSAAQQ
AGMNGVGGLD YLLSLLQSAA 301 NKSGSPAEAA TNVQNLLSKT LSPDTIGRLK
KMANPNDPKK GVDWIGSVVQ 351 GKQNGENAVQ VLSRLADAML VKDKQYQDYK
KRAAAGDKTA AEQANMLKGA 401 LLAQLLPDLQ AKQGLLAATD MTQIREYMAS
LAGVTLDNGK IAKNNEARML 451 SAAAQQEQQE SLAMLRESLT GTLVDMETSF
KKLAAEYPNA TLALQALTTA 501 ATAASAAMLL TAGGGKGAGF LKDVGSKALG
WGKASAGGVA AGATAAGGKL 551 LSWGKSAGSG LMNNPALVKR AGLLGMLLYS
ESLGDGTLPK GLRGTKTTPE 601 MINRLKNNGI RFEPAPKREQ ARGGVPQYLA
APSAQPTDKM LSPLFSTQTA 651 AYQAAIQQQT AAYQAALAQD TAAVTTGLAQ
VQSAMASASQ TINTNVSLNI 701 DGRVIANEVS RYQVAMFGRG AGQ*
[0351] a719.seq not found yet
[0352] a719.pep not found yet
[0353] g720.seq not found yet
[0354] g720.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2429>:
TABLE-US-02871 m720.seq 1 ATGAGCGGAT GGCATACCTT ATTGCAGGAC
GCATCTTACA AGGGCGTCGG 51 CTTTGATATT GAGGTGGTGG ACGAGAGCAA
CGGCAAGGCA TTGGCCGAGC 101 ATGCGCGGCC GTTTGTGCAG GGTATCGACC
TTGAAGACAT GGGCATGACC 151 GGGCGGCAGG TGCAGATTAA TGCGGTGTTT
TGGGGCAAGG GCTATGCAGG 201 CCGTCTGAAA AAGCTGCTGG ATGCGCTGGA
GCAGCCGGGC GGCGGCGTGC 251 TGGTGCACCC TGTTTGGGGG CGGATGCACA
ACATGATTGC GGCATCATGG 301 AGTTACCGAC ATGAGGCCGA TTATGTGGAT
TATGCGGGCA TCGATATTAC 351 TTTCCGCGAG GCGGCCGAAG CGCAGGAAAT
CTTTGTTTTT GAAAACGCCT 401 TTTTGGTCGA GCTTGAGGCG TTGATTGCTA
ATATCGACAC CTACCGCGAG 451 GCGGCTATCG GCTTTGTTGA TGCGGTGTTG
GCGGTGGATG CGGGCGTATC 501 AGCTTTATGG GGCAGCGCGC TGGGCATTTG
GAGTGCGGCA TCGGGTACGT 551 TTGGCGCGGT GCGCCGTTTG TTTGATTTGG
ACAAAATTGC CTTTCCCGAT 601 CGGGGCGGAT ACAGTGCAGC GGCGTTTAAA
AACGGCTCGG CCAAGCTGTT 651 TGCGGATATA TCGGTCATGG TAGATACTGG
CATACGCCGT GAGGCGGGTT 701 TGGCCGATAA TGCCATGCAC CATGCCGGTT
GGTCGCCGCG ACAGCGGTTT 751 GACGGGGCTG CGGCTGTTGC CGACCGCGCC
GCCGCTATCC CTGATAATTT 801 GCTGACCGGC CGCTTTTCAG ACGGCCTGCA
AAACCGCCTG AACCGGTTAA 851 CCGCCAAACA GGTGCAGCCG GTAGCGCAGG
CGGTGCGCCT GTTATCCACG 901 TCATCGCTGT TGTCGGTGGC AACGGCATTA
ATCGAGGCGC ATGGCGAAGA 951 GATGACCGCG CCCGATTTGA TTGAGGTTAA
CCGCGCCATG CGCCGCCGTA 1001 TGCAGGCCGA GATTGCCGCC TTGCGGGCGG
TGCAGACGGC TGCTGCCGAG 1051 TCTGGTGGGC TGACGGCCAA CGCCGTGTAT
ACCGAGGCTT ACCAAACGGC 1101 AGAATCCCTG CGCGCGGCGG CAGGCCGTCT
GAATGCGTTG GTTGCGGCGG 1151 TCATCAACCA AAAGCCGCCG CTGATTGTGC
GCCAAGCCCC AATCGACGGT 1201 ACGATACACC AAATCGCCCA CGAGTTTTAC
GGCGATATAG CCCGCGCAGC 1251 AGAGCTGGTG CGGCTCAATC CCCATATCCA
CCACCCCGCG TTTATCAAGC 1301 GCGGCACTTT GGTCAACAGC TATGCAAAAT AA
This corresponds to the amino acid sequence <SEQ ID 2430; ORF
720>:
TABLE-US-02872 m720.pep 1 MSGWHTLLQD ASYKGVGFDI EVVDESNGKA
LAEHARPFVQ GIDLEDMGMT 51 GRQVQINAVF WGKGYAGRLK KLLDALEQPG
GGVLVHPVWG RMHNMIAASW 101 SYRHEADYVD YAGIDITFRE AAEAQEIFVF
ENAFLVELEA LIANIDTYRE 151 AAIGFVDAVL AVDAGVSALW GSALGIWSAA
SGTFGAVRRL FDLDKIAFPD 201 RGGYSAAAFK NGSAKLFADI SVMVDTGIRR
EAGLADNAMH HAGWSPRQRF 251 DGAAAVADRA AAIPDNLLTG RFSDGLQNRL
NRLTAKQVQP VAQAVRLLST 301 SSLLSVATAL IEAHGEEMTA PDLIEVNRAM
RRRMQAEIAA LRAVQTAAAE 351 SGGLTANAVY TEAYQTAESL RAAAGRLNAL
VAAVINQKPP LIVRQAPIDG 401 TIHQIAHEFY GDIARAAELV RLNPHIHHPA
FIKRGTLVNS YAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2431>:
TABLE-US-02873 a720.seq (partial) 1 GGCCTGCAAA ACCGCCTGAA
CCGGTTAACC GCCAAACAGG TGCAGCCGGT 51 AGCGCAGGCG GTGCGCCTGT
TATCCACGTC ATCGCTGTTG TCGGTGGCAA 101 CGGCATTAAT CGAGGCGCAT
GGCGAAGAGA TGACCGCGCC CGATTTGATT 151 GAGGTTAACC GCGCCATGCG
CCGCCGTATG CAGGCCGAGA TTGCCGCCTT 201 ACGGGCGGTG CAGACGGCTG
CTGCCGAGTC TGGTGGGCTG ACGGCCAACG 251 CCGTGTATAC CGAGGCTTAC
CAAACGGCAG AATCCCTGCG CGCGGCGGCA 301 GGCCGTCTGA ATGCGTTGGT
TGCGGCGGTC ATCAACCAAA AGCCGCCGCT 351 GATTGTGCGC CAAGCCCCAA
TCGACGGTAC GATACACCAA ATCGCCCACG 401 AGTTTTACGG CGATATAGCC
CGCGCAGCAG AGCTGGTGCG GCTCAATCCC 451 CATATCCACC ACCCCGCGTT
TATCAAGCGC GGCACTTTGG TCAACAGCTA 501 TGCAAAATAA
This corresponds to the amino acid sequence <SEQ ID 2432; ORF
720.a>:
TABLE-US-02874 a720.pep (partial) 1 GLQNRLNRLT AKQVQPVAQA
VRLLSTSSLL SVATALIEAH GEEMTAPDLI 51 EVNRAMRRRM QAEIAALRAV
QTAAAESGGL TANAVYTEAY QTAESLRAAA 101 GRLNALVAAV INQKPPLIVR
QAPIDGTIHQ IAHEFYGDIA RAAELVRLNP 151 HIHHPAFIKR GTLVNSYAK*
m720/a720 100.0% identity in 169 aa overlap 250 260 270 280 290 300
m720.pep
SPRQRFDGAAAVADRAAAIPDNLLTGRFSDGLQNRLNRLTAKQVQPVAQAVRLLSTSSLL
|||||||||||||||||||||||||||||| a720 GLQNRLNRLTAKQVQPVAQAVRLLSTSSLL
10 20 30 310 320 330 340 350 360 m720.pep
SVATALIEAHGEEMTAPDLIEVNRAMRRRMQAEIAALRAVQTAAAESGGLTANAVYTEAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a720
SVATALIEAHGEEMTAPDLIEVNRAMRRRMQAEIAALRAVQTAAAESGGLTANAVYTEAY 40 50
60 70 80 90 370 380 390 400 410 420 m720.pep
QTAESLRAAAGRLNALVAAVINQKPPLIVRQAPIDGTIHQIAHEFYGDIARAAELVRLNP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a720
QTAESLRAAAGRLNALVAAVINQKPPLIVRQAPIDGTIHQIAHEFYGDIARAAELVRLNP 100
110 120 130 140 150 430 440 m720.pep HIHHPAFIKRGTLVNSYAKX
|||||||||||||||||||| a720 HIHHPAFIKRGTLVNSYAKX 160 170
[0355] g721.seq not found
[0356] g721.pep not found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2433>:
TABLE-US-02875 m721.seq 1 ATGTCCAAAA ATGCACAAAA AACCCTACTT
GCCGTGTGCA GTTTCGAGGT 51 GCAGCCAAAA GACGGGCGAA TCCAACTGCT
GCCATATGGC GAATTTCGCG 101 CAGTAGACGG TCGTCCGACT GATGTCCCTG
CGTGGTATCT GACCGAAGAA 151 AACGGTCATG ATGTCGCGTT GTTGGCCAAC
AGCTCGCGCA ATCAGTTGGT 201 TGTCGATTAT GAACACCAGA CGCTCTACAA
AGAGAAAAAC GGACAACCTG 251 CACCTGCCGC CGGTTGGATG CGTTGGCTGG
AGTTCACGCC TAAAGGCATG 301 TTTGCCGAAG TGGAGTGGAC GGACAAGGCG
GCTGCGGCAA TTGCCGCAAA 351 AGAGTATCGC TACATCTCTG CTGTGTTTTC
CTATGACACA AAGGGATATG 401 TAAGCAAAAT TTTTCACGCC GCGCTGACAA
ATTTCCCCGC GTTGGACGGT 451 ATGGACGAGG TGCTGGCGGC AGCGTCGGCG
CAAATTTTAA AACCGGAAAC 501 GGAGCAAAAC CCTATGAAAG AGTTGTTACA
GCAACTGTTC GACCTGCCTG 551 ATGCGGGCGA AGAAGAACTG AAGGCGGCAT
TGTCCGCGCT CGTGGAAGCC 601 AAGCCGAAAG ACGTGGCATT GTCTGCCGAC
GTGTTCGCGC AGCTGGCGGA 651 AAAAGACAGC CGCATCGCGG CATTGACGGC
GCAAACCGCC AAGCCTGATT 701 TGACTAAATA CGCGCCTATC TCAGTGGTTC
AAGAGCTGCA AAGCAAAGTC 751 GCCGCGCTGA CTGCCAAGCA GGAAGCAGAC
AAAGGCAACG AATTGATTAC 801 CGCCGCGCTG ACTTCAGGCA AATTGCTGCC
TGCTCAGAAG GAGTGGGCAA 851 AAGGCGTATT GAAACAGCCG GGCGGCTTGG
CATTTTTGAC CGGCTTTATT 901 GAAAACGCCC AGCCGGTCGC TGCACTGGCA
GGCTCGCAAA CGGGCGGCAA 951 AGCACCCGAC GAACGCGTCG CCGCACTGAC
TGCGGAAGAG GCAGCCGCAG 1001 CAAAAATGCT GGGCATGTCC GGCGAAGAAT
TTGTAAAAAT CAAAGAAAGC 1051 GAAGGTAAGT AA
This corresponds to the amino acid sequence <SEQ ID 2434; ORF
721>:
TABLE-US-02876 m721.pep 1 MSKNAQKTLL AVCSFEVQPK DGRIQLLPYG
EFRAVDGRPT DVPAWYLTEE 51 NGHDVALLAN SSRNQLVVDY EHQTLYKEKN
GQPAPAAGWM RWLEFTPKGM 101 FAEVEWTDKA AAAIAAKEYR YISAVFSYDT
KGYVSKIFHA ALTNFPALDG 151 MDEVLAAASA QILKPETEQN PMKELLQQLF
DLPDAGEEEL KAALSALVEA 201 KPKDVALSAD VFAQLAEKDS RIAALTAQTA
KPDLTKYAPI SVVQELQSKV 251 AALTAKQEAD KGNELITAAL TSGKLLPAQK
EWAKGVLKQP GGLAFLTGFI 301 ENAQPVAALA GSQTGGKAPD ERVAALTAEE
AAAAKMLGMS GEEFVKIKES 351 EGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2435>:
TABLE-US-02877 a721.seq 1 ATGTCCAAAA ATGCACAAAA AACCCTACTT
GCCGTGTGCA GTTTCGAGGT 51 GCAGCCAAAA GACGGGCGAA TCCAACTGCT
GCCATATGGC GAATTTCGCG 101 CAGTAGACGG TCGTCCGACT GATGTCCCTG
CGTGGTATCT GACCGAAGAA 151 AACGGTCATG ATGTCGCGTT GTTGGCCAAC
AGCTCGCGCA ATCAGTTGGT 201 TGTCGATTAT GAACACTAGA CGCTCTACAA
AGAGAAAAAC GGACAACCTG 251 CACCTGCCGC CGGTTGGATG CGTTGGCTGG
AGTTCACGCC TAAAGGCATG 301 TTTGCCGAAG TGGAGTGGAC GGACAAGGCG
GCTGCGGCAA TTGCCGCAAA 351 AGAGTATCGC TACATCTCTG CTGTGTTTTC
CTATGACACA AAGGGATATG 401 TAAGCAAAAT TTTTCACGCC GCGCTGACAA
ATTTCCCCGC GTTGGACGGT 451 ATGGACGAGG TGCTGGCGGC AGCGTCGGCG
CAAATTTTAA AACCGGAAAC 501 GGAGCAAAAC CCTATGAAAG AGTTGTTACA
GCAACTGTTC GGTCTGCCTG 551 ATGCGGGCGA AGAAGAACTG AAGGCGGCAT
TGTCCGCGCT CGTGGAAGCC 601 AAGCCGAAAG ACGTGGCATT GTCTGCCGAC
GTGTTCGCGC AGCTGGCGGA 651 AAAAGACAGC CGCATCGCGG CATTGACGGC
GCAAACCGCC AAGCCTGATT 701 TGACTAAATA CGCGCCTATC TCAGTGGTTC
AAGAGCTGCA AAGCAAAGTC 751 GCCGCGCTGA CTGCCAAGCA GGAAGCAGAC
AAAGGCAACG AATTGATTAC 801 CGCCGCGCTG ACTTCAGGCA AATTGCTGCC
TGCTCAGAAG GAGTGGGCAG 851 AAGGCGTATT GAAACAGCCG GGCGGCTTGG
CATTTTTGAC CGGCTTTATT 901 GAAAACGCCC AGCCGGTCGC TGCACTGGCA
GGCTCGCAAA CGGGCGGTAA 951 AGCACCCGAC GAACGCGTCG CCGCACTGAC
TGCGGAAGAG GCAGCCGCAG 1001 CAAAAATGCT GGGCATGTCC GGCGAAGAAT
TTGTAAAAAT CAAAGAAAGC 1051 GAAGGTAAGT AA
This corresponds to the amino acid sequence <SEQ ID 2436; ORF
721.a>:
TABLE-US-02878 a721.pep 1 MSKNAQKTLL AVCSFEVQPK DGRIQLLPYG
EFRAVDGRPT DVPAWYLTEE 51 NGHDVALLAN SSRNQLVVDY EH*TLYKEKN
GQPAPAAGWM RWLEFTPKGM 101 FAEVEWTDKA AAAIAAKEYR YISAVFSYDT
KGYVSKIFHA ALTNFPALDG 151 MDEVLAAASA QILKPETEQN PMKELLQQLF
GLPDAGEEEL KAALSALVEA 201 KPKDVALSAD VFAQLAEKDS RIAALTAQTA
KPDLTKYAPI SVVQELQSKV 251 AALTAKQEAD KGNELITAAL TSGKLLPAQK
EWAEGVLKQP GGLAFLTGFI 301 ENAQPVAALA GSQTGGKAPD ERVAALTAEE
AAAAKMLGMS GEEFVKIKES 351 EGK* a721/m721 99.2% identity in 353 aa
overlap 10 20 30 40 50 60 a721.pep
MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPAWYLTEENGHDVALLAN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m721
MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPAWYLTEENGHDVALLAN 10 20
30 40 50 60 70 80 90 100 110 120 a721.pep
SSRNQLVVDYEHXTLYKEKNGQPAPAAGWMRWLEFTPKGMFAEVEWTDKAAAAIAAKEYR
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| m721
SSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFAEVEWTDKAAAAIAAKEYR 70 80
90 100 110 120 130 140 150 160 170 180 a721.pep
YISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASAQILKPETEQNPMKELLQQLF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m721
YISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASAQILKPETEQNPMKELLQQLF 130
140 150 160 170 180 190 200 210 220 230 240 a721.pep
GLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEKDSRIAALTAQTAKPDLTKYAPI
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m721
DLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEKDSRIAALTAQTAKPDLTKYAPI 190
200 210 220 230 240 250 260 270 280 290 300 a721.pep
SVVQELQSKVAALTAKQEADKGNELITAALTSGKLLPAQKEWAEGVLKQPGGLAFLTGFI
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| m721
SVVQELQSKVAALTAKQEADKGNELITAALTSGKLLPAQKEWAKGVLKQPGGLAFLTGFI 250
260 270 280 290 300 310 320 330 340 350 a721.pep
ENAQPVAALAGSQTGGKAPDERVAALTAEEAAAAKMLGMSGEEFVKIKESEGKX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m721
ENAQPVAALAGSQTGGKAPDERVAALTAEEAAAAKMLGMSGEEFVKIKESEGKX 310 320 330
340 350
[0357] g722.seq not found yet
[0358] g722.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2437>:
TABLE-US-02879 m722.seq 1 GTGTTTGAAA CGCCGACATT TGAGCAAATC
CGCGAGCGTA TCCTGCGCGA 51 TACCAAAAGC CTGTGGCCGG ATGCCGATAT
CAGCCCCGAC AGCGACCATT 101 ATGTGCACGC CAGCCGTTTG GCCAGCTGCG
CCGAAGGGCA ATATGCGCAT 151 CAAAGCTGGA TTGTGCGGCA GATTTTCCCT
GATACCGCCG ACCGCGAGTA 201 TTTGGAGCGG CATGCCTCCA TGCGCGGCTT
GAGCCGCCGC AATCCTACCA 251 CGGCCAGCGG CACGCTGACC GTAAGCGGTA
TTGCGCAATC CATGCTTTCA 301 GACGACCTGC AAGTGCGTAT CGGCCAGCGT
TTTTACCGCA CTACCGCCCG 351 CGCCGTTATC GGCAGCGGCG GCACGGCGGA
AATACCGGCA ATCGCCGACG 401 AGCCGGGCGC GGCCGCCAAT GTGGGCGACG
GCGAGGCGCA ACTGATGGCC 451 GCCCCCGCCG GTGTGGCCAC CGAATGCCGC
CTTACCGTAC AAGGCGGCAC 501 CGACCGAGAA AGCGATGCCT CACTGCTGGC
GCGTCTGTTG GAAATCATCC 551 GCCGACCGCC CGCAGGCGGC AACCGTTACG
ACTATAAAAA CTGGGCGTTG 601 AGTGTTGACG GCGTAACCAG CGCATATGTT
TATCCGCTGC GCCGCGGCTT 651 GGGTACGGTG GATATTGCCA TTACCTCCGC
CGACGGTGTG TCGTCGGAAG 701 AAACTGTGCG CCGCGTACAG GCTTATATCG
ACGAGATGCG CCCGGTAACG 751 GCAAAAAATG CGCTGGTACT CAAGCCAACC
GTAACGGCGG TGCCTGTTAC 801 CGTGCAAGTC AAGCTCGACG GTATCGACTT
GGACGAGGCC AAGCGCCGCA 851 TACGGACGGC CCTAAAAGAA TATTTCGACA
CCCTGATCCC CGGCGACGGC 901 CTGACTGTGT CGCAAATCGA GGCTGCTATC
AGCAATGTGG ATGGTGTGAT 951 CGACCGCCGT CTGACTGCGC CGACGGCCAA
CCGTGCCGCC GATACGGTTA 1001 ACCGCATCGA GTGGTTTAAA GCGGGCGCGA
TTAATGTAAC GGAGATGCCG 1051 TCATGA
This corresponds to the amino acid sequence <SEQ ID 2438; ORF
722>:
TABLE-US-02880 m722.pep 1 VFETPTFEQI RERILRDTKS LWPDADISPD
SDHYVHASRL ASCAEGQYAH 51 QSWIVRQIFP DTADREYLER HASMRGLSRR
NPTTASGTLT VSGIAQSMLS 101 DDLQVRIGQR FYRTTARAVI GSGGTAEIPA
IADEPGAAAN VGDGEAQLMA 151 APAGVATECR LTVQGGTDRE SDASLLARLL
EIIRRPPAGG NRYDYKNWAL 201 SVDGVTSAYV YPLRRGLGTV DIAITSADGV
SSEETVRRVQ AYIDEMRPVT 251 AKNALVLKPT VTAVPVTVQV KLDGIDLDEA
KRRIRTALKE YFDTLIPGDG 301 LTVSQIEAAI SNVDGVIDRR LTAPTANRAA
DTVNRIEWFK AGAINVTEMP 351 S*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2439>:
TABLE-US-02881 a722.seq 1 GTGTTTGAAA CGCCGACATT TGAGCAAATC
CGCGAGCGTA TCCTGCGCGA 51 TACCAAAAGC CTGTGGCCGG ATGCCGATAT
CAGCCCCGAC AGCGACCATT 101 ATGTGCACGC CAGCCGTTTG GCCAGCTGCG
CCGAAGGGCA ATATGCGCAT 151 CAAAGCTGGA TTGTGCGGCA GATTTTCCCT
GATACCGCCG ACCGCGAGTA 201 TTTGGAGCGG CATGCCTCCA TGCGCGGCTT
GCGCCGCCGC AATCCTACCA 251 CGGCCAGCGG CACGCTGACC GTAAGCGGTA
TTGCGCAATC CATGCTTTCA 301 GACGGCCTGC AAGTGCGTAT CGGCCAGCGT
TTTTACCGCA CTACCGCCCG 351 CGCCGTTATC GGCAGCGGCG GCACGGCGGA
AATACCGGCA ATCGCCGACG 401 AGCCGGGCGC GGCCGCCAAT GTGCGCGACG
GCGAGGCGCA ACTGATGGCC 451 GCCCCCGCCG GTGTGTCCAC CGAATGCCGC
CTTACCGTAC AAGGCGGCAC 501 CGACCGAGAA AGCGATGCCT CACTGCTGGC
GCGTCTGTTG GAAATCATCC 551 GCCGACCGCC CGCAGGCGGC AACCGTTACG
ACTATAAAAA CTGGGCGTTG 601 AGTGTTGACG GCGTAACCAG CGCATATGTT
TATCCGCTGC GCCGCGGCTT 651 GGGTACGGTG GATATTGCCA TTACCTCCGC
CGACGGTGTG CCATCGGAAG 701 AAACTGTGCG CCGCGTACAG GCTTATATCG
ACGAGATGCG CCCGGTAACG 751 GCAAAAAATG CGCTGGTACT CAAGCCAACC
GTAACGGCGG TGCCTGTTAC 801 CGTGCAAGTC AAGCTCGACG GCATCGACTT
GGACGAGGCC AAGCGCCGCA 851 TACGGACGGC CCTAAAAGAA TATTTCGACA
CCCTGATCCC CGGCGACGGC 901 CTGACTGTGT CGCAAATCGA GGCGGCTATC
AGCAATGTGG ATGGTGTGAT 951 CGACCTCCGT CTGACTGCGC CGACGGCCAA
CCGTGCCGCC GATACGGTTA 1001 ACCGCATCGA GTGGTTTAAA GCGGGCGCGA
TTAATGTAAC GGAGATGCCG 1051 TCATGA
This corresponds to the amino acid sequence <SEQ ID 2440; ORF
722.a>:
TABLE-US-02882 a722.pep 1 VFETPTFEQI RERILRDTKS LWPDADISPD
SDHYVHASRL ASCAEGQYAH 51 QSWIVRQIFP DTADREYLER HASMRGLRRR
NPTTASGTLT VSGIAQSMLS 101 DGLQVRIGQR FYRTTARAVI GSGGTAEIPA
IADEPGAAAN VRDGEAQLMA 151 APAGVSTECR LTVQGGTDRE SDASLLARLL
EIIRRPPAGG NRYDYKNWAL 201 SVDGVTSAYV YPLRRGLGTV DIAITSADGV
PSEETVRRVQ AYIDEMRPVT 251 AKNALVLKPT VTAVPVTVQV KLDGIDLDEA
KRRIRTALKE YFDTLIPGDG 301 LTVSQIEAAI SNVDGVIDLR LTAPTANRAA
DTVNRIEWFK AGAINVTEMP 351 S*
[0359] g723.seq not found yet
[0360] g723.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2441>:
TABLE-US-02883 m723.seq 1 ATGCGACCCA AGCCCCGTTT CAGACGGTCT
GTTATCGCTT GCTCAATATC 51 AGTGATCACG CCCGAACACC TTATTTTTAC
CGTTTACAAA CACAATACCG 101 TCTTCGCCCG CGGCCACTTC TTCGCCGCTA
TCATCCACGC CCAGCTGCAC 151 TTCGCCTTTG GCCATAGCAC GCAGCAGGTC
GAGCACGTCG ATTTTGTAGC 201 GGTTGCGGAT TTCGTCGGTA ATCAACACGC
CCTGAGCCGC CGTCAGACGG 251 TAGCGGGCAA TGTCGCAGCA AAGGCGCACC
AAGATGGGCG GCAGATCCTC 301 AAAAGGTCGT CTGAACCGCC CCAGATACGC
GTCGATTTCG GCAGTGGCGT 351 CCACCAGCGC GGTTTGTGCG ACCTCGCGGT
CAATCAGCCC CTCGTTGTTG 401 CGGTCGGTGA GCTGCAAGAC TTCCAGCTCA
CCGAAACGCG CAACCATATC 451 CTCAACCGTC GCGTATGCCA TTACTCGACC
GCCTTGCGTT GCAGCATAGG 501 CTCGGCGCAG ATTGCCTTCC ACACCGCTTC
GCCGACTTCG GCGCGCTTCA 551 CTTCGCGCCA GCCGCCGTCA AACAGCAGGC
CGCCGCGCCA AAATTCTTTG 601 CCGTCTGCGC CGGTACTGAC GAGCATCACA
TCGCGGCTGT CCGCCAAAGC 651 GTCGGCGGCA CGTTGCGTAT GCTGCACTTT
GAGTTCGGCA AGTTCGGCGG 701 ACAGTGCCTT TTTGTCGTCT TCGGCTTTTT
CCAAGGCTGT GGTCAGCATT 751 TCGACATCGT TTCGGGCGGC GGCAAGCTCT
GCCTGCACGG CGTCCAATTC 801 GGCTTTGATG TCTTCAAACG ACGGGGCGGC
GGTTTCGGCG GTTTCTGGTT 851 TGTTGTTGGT TTTTGCCATG ATGACTCCTT
GTTTCAGACG GCGGCGGATT 901 CGCATTTGA
This corresponds to the amino acid sequence <SEQ ID 2442; ORF
723>:
TABLE-US-02884 m723.pep 1 MRPKPRFRRS VIACSISVIT PEHLIFTVYK
HNTVFARGHF FAAIIHAQLH 51 FAFGHSTQQV EHVDFVAVAD FVGNQHALSR
RQTVAGNVAA KAHQDGRQIL 101 KRSSEPPQIR VDFGSGVHQR GLCDLAVNQP
LVVAVGELQD FQLTETRNHI 151 LNRRVCHYST ALRCSIGSAQ IAFHTASPTS
ARFTSRQPPS NSRPPRQNSL 201 PSAPVLTSIT SRLSAKASAA RCVCCTLSSA
SSADSAFLSS SAFSKAVVSI 251 STSFRAAASS ACTASNSALM SSNDGAAVSA
VSGLLLVFAM MTPCFRRRRI 301 RI*
[0361] a723.seq not found yet
[0362] a723.pep not found yet
[0363] g724.seq not found yet
[0364] g724.pep not found yet
The following partial DNA sequence, shown with its encoded amino
acid sequence, was identified in N. meningitidis <SEQ ID
2443>:
TABLE-US-02885 m724.map
ATGAGTTTGAGTAAATTGGCGAAAAAAACGGCACAAACTGCTAAAAATATCGGCGAAACC 1
---------+---------+---------+---------+---------+---------+ 60
TACTCAAACTCATTTAACCGCTTTTTTTGCCGTGTTTGACGATTTTTATAGCCGCTTTGG a M S
L S K L A K K T A Q T A K N I G E T -
CTGCGCGCGGCCTTTCGGGGAAAAATCACGCTGGTGGTGTCGTCCGAGCCGATACAGCGC 61
---------+---------+---------+---------+---------+---------+ 120
GACGCGCGCCGGAAAGCCCCTTTTTAGTGCGACCACCACAGCAGGCTCGGCTATGTCGCG a L R
A A F R G K I T L V V S S E P I Q R -
GTGCAGTTGAGCGGCTTGGCCGACGAAACCCTGCAAGACCTTGAACATTTGCAGGAATAC 121
---------+---------+---------+---------+---------+---------+ 180
CACGTCAACTCGCCGAACCGGCTGCTTTGGGACGTTCTGGAACTTGTAAACGTCCTTATG a V Q
L S G L A D E T L Q D L E H L Q E Y -
GGCTTTGCCAGCCATCCGCCCGACGGCAGCGAAGCGGTAGTGATACCGCTGGGCGGCAAT 181
---------+---------+---------+---------+---------+---------+ 240
CCGAAACGGTCGGTAGGCGGGCTGCCGTCGCTTCGCCATCACTATGGCGACCCGCCGTTA a G F
A S H P P D G S E A V V I P L G G N -
ACTTCGCACGGTGTGATTGTGTGCAGCCAGCACGGCAGCTACCGCATCAAAAACCTTAAG 241
---------+---------+---------+---------+---------+---------+ 300
TGAAGCGTGCCACACTAACACACGTCGGTCGTGCCGTCGATGGCGTAGTTTTTGGAATTC a T S
H G V I V C S Q H G S Y R I K N L K -
CCCGGCGAGACGGCGATTTTTAATCATGAGGGTGCAAAAATCGTGATTAAGCAAGGCAAA 301
---------+---------+---------+---------+---------+---------+ 360
GGGCCGCTCTGCCGCTAAAAATTAGTACTCCCACGTTTTTAGCACTAATTCGTTCCGTTT a P G
E T A I F N H E G A K I V I K Q G K -
ATCATTGAGGCCGATTGCGACGTGTACCGGGTTAACTGCAAACAATACGAGGTTAATGCG 361
---------+---------+---------+---------+---------+---------+ 420
TAGTAACTCCGGCTAACGCTGCACATGGCCCAATTGACGTTTGTTATGCTCCAATTACGC a I I
E A D C D V Y R V N C K Q Y E V N A -
GCCACGGATGCCAAATTTAACGCTCCGTTGGTGGAGACCAGTGCAGTGTTGACGGCGCAA 421
---------+---------+---------+---------+---------+---------+ 480
CGGTGCCTACGGTTTAAATTGCGAGGCAACCACCTCTGGTCACGTCACAACTGCCGCGTT a A T
D A K F N A P L V E T S A V L T A Q -
GGCCAAATCAACGGCAACGGCGGCATGGCCGTCGAGGGCGGCGACGGAGCCACCTTTAGC 481
---------+---------+---------+---------+---------+---------+ 540
CCGGTTTAGTTGCCGTTGCCGCCGTACCGGCAGCTCCCGCCGCTGCCTCGGTGGAAATCG a G Q
I N G N G G M A V E G G D G A T F S -
GGCGATGTTAACCAAACGGGCGGCAGCTTTAACACCGACGGCGACGTGGTGGCCGGCAAT 541
---------+---------+---------+---------+---------+---------+ 600
CCGCTACAATTGGTTTGCCCGCCGTCGAAATTGTGGCTGCCGCTGCACCACCGGCCGTTA a G D
V N Q T G G S F N T D G D V V A G N -
ATATCGTTGCGCCAGCACCCGCATACCGACAGCATCGGCGGCAAAACCTTACCGGCGGAA 601
---------+---------+---------+---------+---------+---------+ 660
TATAGCAACGCGGTCGTGGGCGTATGGCTGTCGTAGCCGCCGTTTTGGAATGGCCGCCTT a I S
L R Q H P H T D S I G G K T L P A E - CCGGCATAG 661 --------- 669
GGCCGTATC a P A * - Enzymes that do cut: NONE Enzymes that do not
cut: BamHI BglII EcoRI HindIII KpnI NdeI NheI PstI SacI SalI SmaI
SphI XbaI XhoI
This corresponds to the amino acid sequence <SEQ ID 2444; ORF
724>:
TABLE-US-02886 m724.pep 1 MSLSKLAKKT AQTAKNIGET LRAAFRGKIT
LVVSSEPIQR VQLSGLADET 51 LQDLEHLQEY GFASHPPDGS EAVVIPLGGN
TSHGVIVCSQ HGSYRIKNLK 101 PGETAIFNHE GAKIVIKQGK IIEADCDVYR
VNCKQYEVNA ATDAKFNAPL 151 VETSAVLTAQ GQINGNGGMA VEGGDGATFS
GDVNQTGGSF NTDGDVVAGN 201 ISLRQHPHTD SIGGKTLPAE PA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2445>:
TABLE-US-02887 a724.seq 1 ATGAGTTTGA GTAAATTGGC GAAAAAAACG
GCACAAACTG CTAAAAATAT 51 CGGCGAAACC CTGCGCGCGG CCTTTCGGGG
AAAAATCACG CTGGTGGTGT 101 CGTCCGAGCC GATACAGCGC GTGCAGTTGA
GCGGCTTGGC CGACGAAACC 151 CTGCAAGACC TTGAACATTT GCAGGAATAC
GGCTTTGCCA GCCATCCGCC 201 CGACGGCAGC GAAGCGGTAG TGATACCGCT
GGGCGGCAAT ACTTCGCACG 251 GTGTGATTGT GTGCAGCCAG CACGGCAGCT
ACCGCATCAA AAACCTTAAG 301 CCCGGCGAGA CGGCGATTTT TAATCATGAG
GGTGCAAAAA TCGTGATTAA 351 GCAAGGCAAA ATCATTGAGG CCGATTGCGA
CGTGTACCGG GTTAACTGCA 401 AACAATACGA GGTTAATGCG GCCACGGATG
CCAAATTTAA CGCTCCGTTG 451 GTGGAGACCA GTGCAGTGTT GACGGCGCAA
GGCCAAATCA ACGGCAACGG 501 CGGCATGGCC GTCGAGGGCG GCGACGGAGC
CACCTTTAGC GGCGATGTTA 551 ACCAAACGGG CGGCAGCTTT AACACCGACG
GCGACGTGGT GGCCGGCAAT 601 ATATCGTTGC GCCAGCACCC GCATACCGAC
AGCATCGGCG GCAAAACCTT 651 ACCGGCGGAA CCGGCATAG
This corresponds to the amino acid sequence <SEQ ID 2446; ORF
724.a>:
TABLE-US-02888 a724.pep 1 MSLSKLAKKT AQTAKNIGET LRAAFRGKIT
LVVSSEPIQR VQLSGLADET 51 LQDLEHLQEY GFASHPPDGS EAVVIPLGGN
TSHGVIVCSQ HGSYRIKNLK 101 PGETAIFNHE GAKIVIKQGK IIEADCDVYR
VNCKQYEVNA ATDAKFNAPL 151 VETSAVLTAQ GQINGNGGMA VEGGDGATFS
GDVNQTGGSF NTDGDVVAGN 201 ISLRQHPHTD SIGGKTLPAE PA* a724/m724
100.0% identity in 222 aa overlap 10 20 30 40 50 60 a724.pep
MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLSGLADETLQDLEHLQEY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m724
MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLSGLADETLQDLEHLQEY 10 20
30 40 50 60 70 80 90 100 110 120 a724.pep
GFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPGETAIFNHEGAKIVIKQGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m724
GFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPGETAIFNHEGAKIVIKQGK 70 80
90 100 110 120 130 140 150 160 170 180 a724.pep
IIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQGQINGNGGMAVEGGDGATFS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m724
IIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQGQINGNGGMAVEGGDGATFS 130
140 150 160 170 180 190 200 210 220 a724.pep
GDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLPAEPAX
||||||||||||||||||||||||||||||||||||||||||| m724
GDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLPAEPAX 190 200 210 220
[0365] g725.seq not found yet
[0366] g725.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2447>:
TABLE-US-02889 m725.seq 1 ATGGTGCGCA CGGTTAAAAG CTACAACGGC
GAGGCCGACG ATTTGGCGGG 51 GCAAATCCAT ACGCTGCCTG CGGTTTGGGT
AACGTATGGC GGCAGCAAAG 101 TTGAGCCTGC CAGCACCGGC GGCGTATGCG
GACGTTATCA GGATACCGCC 151 GAATTTGTGG TGATGGTGGC GGCCCGCAAT
CTGCGCAACG AGCAGGCGCA 201 GCGGCAAGGC GGCATCGACA GCCGCGAAAT
CGGCAGCAAC GATTTAATCC 251 GCGCTGTTCG CCGCCTGCTT GACGGCCAGC
GGCTCGGTTT TGCCGATAGC 301 CGCGGCTTGG TGCCCAAAGC GGTGCGCGCG
ATTGCCAATC ATGTGCTGGT 351 GCAAAACGCC GCAGTAAGCA TATATGCGGT
TGAGTATGCC ATCCGCTTTA 401 ACACCTGCGG GTTGGAAAAT GACCGCTACC
CCGAACGCAC CGACAATCCC 451 GACGACCCCA ACCATATCTT TACCAAGTAT
CAGGGTACAT TGAGCGAGCC 501 GTGGCCTGAT TTCGAGGGGT TGGACGGCAA
AATTTACGAC CCGCAATCCG 551 CCGATGAAAT ACCTGTAAAC CTAACCCTTA
AGGATAAGCA ATGA
This corresponds to the amino acid sequence <SEQ ID 2448; ORF
725>:
TABLE-US-02890 m725.pep 1 MVRTVKSYNG EADDLAGQIH TLPAVWVTYG
GSKVEPASTG GVCGRYQDTA 51 EFVVMVAARN LRNEQAQRQG GIDSREIGSN
DLIRAVRRLL DGQRLGFADS 101 RGLVPKAVRA IANHVLVQNA AVSIYAVEYA
IRFNTCGLEN DRYPERTDNP 151 DDPNHIFTKY QGTLSEPWPD FEGLDGKIYD
PQSADEIPVN LTLKDKQ*
[0367] a725.seq not found yet
[0368] a725.pep not found yet
[0369] g726.seq not found yet
[0370] g726.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2449>:
TABLE-US-02891 m726.seq 1 ATGACCATCT ATTTCAAAAA CGGCTTTTAC
GACGACACAT TGGGCGGCAT 51 CCCCGAAGGC GCGGTTGCCG TCCGCGCCGA
AGAATACGCC GCCCTTTTGG 101 CAGGACAGGC GCAGGGCGGG CAGATTGCCG
CAGATTCCGA CGGCCGCCCC 151 GTTTTAACCC CGCCGCGCCC GTCCGATTAC
CACGAATGGG ACGGCAAAAA 201 ATGGAAAATC AGCAAAGCCG CCGCCGCCGC
CCGTTTCGCC AAACAAAAAA 251 CCGCCTTGGC ATTCCGCCTC GCGGAAAAGG
CGGACGAACT CAAAAACAGC 301 CTCTTGGCGG GCTATCCCCA AGTGGAAATC
GACAGCTTTT ACAGGCAGGA 351 AAAAGAAGCC CTCGCGCGGC AGGCGGACAA
CAACGCCCCG ACCCCGATGC 401 TGGCGCAAAT CGCCGCCGCA AGGGGCGTGG
AATTGGACGT TTTGATTGAA 451 AAAGTTATCG AAAAATCCGC CCGCCTGGCT
GTTGCCGCCG GCGCGATTAT 501 CGGAAAGCGT CAGCAGCTCG AAGACAAATT
GAACACCATC GAAACCGCGC 551 CCGGATTGGA CGCGCTGGAA AAGGAAATCG
AAGAATGGAC GCTAAACATC 601 GGCTGA
This corresponds to the amino acid sequence <SEQ ID 2450; ORF
726>:
TABLE-US-02892 m726.pep 1 MTIYFKNGFY DDTLGGIPEG AVAVRAEEYA
ALLAGQAQGG QIAADSDGRP 51 VLTPPRPSDY HEWDGKKWKI SKAAAAARFA
KQKTALAFRL AEKADELKNS 101 LLAGYPQVEI DSFYRQEKEA LARQADNNAP
TPMLAQIAAA RGVELDVLIE 151 KVIEKSARLA VAAGAIIGKR QQLEDKLNTI
ETAPGLDALE KEIEEWTLNI 201 G*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2451>:
TABLE-US-02893 a726.seq 1 ATGACCATCT ATTTCAAAAA CGGCTTTTAC
GACGACACCT TGGGCAGCAT 51 CCCCGAAGGC GCGGTTGCCG TCCGCGCCGA
AGAATACGCC GCCCTTTTGG 101 CAGGACAGGC GCAGGGCGGG CAGATTGCCG
CAGATTCCGA CGGCCGCCCC 151 GTTTTAACCC CGCCGCGCCC GTCCGAATAC
CACGAATGGG ACGGCAAGAA 201 ATGGGAAATC GGCGAAGCCG CTGCCGCCGC
CCGTTTCGCC GAACAAAAAA 251 CCGCCACGGC ATTCCGCCTC GCGGCAAAGG
CGGACGAACT CAAAAACAGC 301 CTCTTGGCGG GCTATCCCCA AGTGGAAATC
GACAGCTTTT ACAGGCAGGA 351 AAAAGAAGCC CTCGCGCGGC AGGCGGACAA
CAACGCCCCG ACCCCGATGC 401 TGGCGCAAAT CGCCGCCGCA AGGGGCGTGG
AATTGGACGT TTTGATTGAA 451 AAAGTTGTCG AAAAATCCGC CCGCCTGGCC
GTTGCCGCCG GCGCGATTAT 501 CGGAAAGCGG CAGCAGCTCG AAGACAAATT
GAACACCATC GAAACCGCGC 551 CAGGATTGGA CGCGCTGGAA AAGGAAATCG
AAGAATGGAC GCTAAACATC 601 GGCTGA
This corresponds to the amino acid sequence <SEQ ID 2452; ORF
726.a>:
TABLE-US-02894 a726.pep 1 MTIYFKNGFY DDTLGSIPEG AVAVRAEEYA
ALLAGQAQGG QIAADSDGRP 51 VLTPPRPSEY HEWDGKKWEI GEAAAAARFA
EQKTATAFRL AAKADELKNS 101 LLAGYPQVEI DSFYRQEKEA LARQADNNAP
TPMLAQIAAA RGVELDVLIE 151 KVVEKSARLA VAAGAIIGKR QQLEDKLNTI
ETAPGLDALE KEIEEWTLNI 201 G* a726/m726 95.5% identity in 201 aa
overlap 10 20 30 40 50 60 a726.pep
MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAADSDGRPVLTPPRPSEY
|||||||||||||||:||||||||||||||||||||||||||||||||||||||||||:| m726
MTIYFKNGFYDDTLGGIPEGAVAVRAEEYAALLAGQAQGGQIAADSDGRPVLTPPRPSDY 10 20
30 40 50 60 70 80 90 100 110 120 a726.pep
HEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLLAGYPQVEIDSFYRQEKEA
||||||||:|::||||||||:|||| ||||| |||||||||||||||||||||||||||| m726
HEWDGKKWKISKAAAAARFAKQKTALAFRLAEKADELKNSLLAGYPQVEIDSFYRQEKEA 70 80
90 100 110 120 130 140 150 160 170 180 a726.pep
LARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLAVAAGAIIGKRQQLEDKLNTI
||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||| m726
LARQADNNAPTPMLAQIAAARGVELDVLIEKVIEKSARLAVAAGAIIGKRQQLEDKLNTI 130
140 150 160 170 180 190 200 a726.pep ETAPGLDALEKEIEEWTLNIGX
|||||||||||||||||||||| m726 ETAPGLDALEKEIEEWTLNIGX 190 200
[0371] g727.seq not found yet
[0372] g727.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2453>:
TABLE-US-02895 m727.seq 1 ATGAATCTCG TGAAACTGCT GGCGAATAAC
TGGCAACCGA TTGCCATTAT 51 CGCGCTTGTC GGCACGGGCT TGGCTGTGTC
GCACCATCAA GGCTACAAGT 101 CGGCATTTGC GAAGCAGCAG GCGGTCATCG
ACAAGATGGA GCGCGACAAG 151 GCGCAAGCCC TGCTGTTGTC GGCTCAAAAC
TATGCGCGCG AACTGGAACT 201 GGCACGCGCG GAAGCTAAAA AATATGAAGT
CAAGGCGCAC GCTGTCGGCA 251 TGGCTTTGGC GAAAAAACAG GCGGAAGTCA
GCCGTCTGAA AACGGAAAGA 301 GACCTTTGCA AAATTCCTTT CCCTCCCGAC
AGCCGAAACC CAAACACAGG 351 TTTTCGGCTG TTTTCGCCCC AAATACCGCC
TAATTTTACC CAAATACCCC 401 CTTAA
This corresponds to the amino acid sequence <SEQ ID 2454; ORF
727>:
TABLE-US-02896 m727.pep 1 MNLVKLLANN WQPIAIIALV GTGLAVSHHQ
GYKSAFAKQQ AVIDKMERDK 51 AQALLLSAQN YARELELARA EAKKYEVKAH
AVGMALAKKQ AEVSRLKTER 101 DLCKIPFPPD SRNPNTGFRL FSPQIPPNFT
QIPP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2455>:
TABLE-US-02897 a727.seq 1 ATGAATCTCG TGAAACTGCT GGCGAATAAC
TGGCAACCGA TTGCCATCAT 51 CGCGCTTGTC GGCACGGGTT TGGCGGTGTC
GCACCATCAA GGCTACAAGT 101 CGGCTTTTGC GAAGCAGCAG GCGGTCATTG
AGAAAATGAA GCGCGACAAG 151 GCGCAAGCCC TGCTGTTGTC GGCTCAAAAC
TACGCCCGCG AACTGGAACA 201 GGCGCGTGCG GAAGCTAAAA AATATGAAGT
CAAGGCGCAC GCCGTCGGCA 251 TGGCTTTGGC GAAAAAACAG GCGGAAGTCA
GCCGTCTGAA AACGGAAAAT 301 AAAAAGGAAA TCGAAAATGT CCTTACTCAA
GACCGTAAAA ATGCAGGCGG 351 CGGTTGTATT GACGGCTTTG GCCATCACGG
CTTGCAGCTC TACAAGCGCG 401 CCCTCGGCTA CGGAAATTAA
This corresponds to the amino acid sequence <SEQ ID 2456; ORF
727.a>:
TABLE-US-02898 a727.pep 1 MNLVKLLANN WQPIAIIALV GTGLAVSHHQ
GYKSAFAKQQ AVIEKMKRDK 51 AQALLLSAQN YARELEQARA EAKKYEVKAH
AVGMALAKKQ AEVSRLKTEN 101 KKEIENVLTQ DRKNAGGGCI DGFGHHGLQL
YKRALGYGN* a727/m727 83.2% identity in 119 aa overlap 10 20 30 40
50 60 a727.pep
MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQAVIEKMKRDKAQALLLSAQN
|||||||||||||||||||||||||||||||||||||||||||:||:||||||||||||| m727
MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQAVIDKMERDKAQALLLSAQN 10 20
30 40 50 60 70 80 90 100 110 119 a727.pep
YARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKKEIENV-LTQDRKNAGGGC ||||||
|||||||||||||||||||||||||||||||| ::: :: : | :| : | m727
YARELELARAEAKKYEVKAHAVGMALAKKQAEVSRLKTE--RDLCKIPFPPDSRNPNTGF 70 80
90 100 110 120 130 140 a727.pep IDGFGHHGLQLYKRALGYGNX m727
RLFSPQIPPNFTQIPPX 120 130
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2457>:
TABLE-US-02899 g728.seq 1 ATGTTTAAAA AATTCAAACC GGTACTGTTG
TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACAG GTATTGCCTA
TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT GAAGTACCTG
AAAATCCGAA TGCTTTTGTG 151 GCGAAACTTG CCCGCCTGTT CCGAAATGCC
GACAGGGCGG TTGTCATCGT 201 GAAGGAATCG ATGAGGACGG AGGAAAGCCT
TGCCGGAGCT GTGGATGACG 251 GTCCGTTGCA GTCGGAGAAG GATTATCTCG
CGCTCGCTAT CCGGCTCAGT 301 CGTTTGAAAG AAAAGGCGAA ATGGTTTCAC
GTAACGGAGC AGGAACATGG 351 GGAAGAGGTT TGGCTGGATT ACTATATCGG
CGAGGGCGGT TTGGTTGCGG 401 TTTCGCTTTC GCAACGCTCG CCGGAAGCGT
TTGTTAATGC CGAATATCTG 451 TATCGGAACG ATCGTCCGTT TTCTGTAAAT
GTGTACGGCG GAACGGCTCA 501 CGGGGAAAAT TATGAAACGA CAGGAGAATA
TCGGGTTGTT TGGCAACCGG 551 ACGGTTCGGT ATTTGATGCG GCGGGGCGCG
GGAAAATCGG GGAAGATGTT 601 TATGAGCATT GCCTCGGGTG TTATCAGATG
GCCCAGGTAT ATTTGGCGAA 651 ATACCGGGAT GTCGCGAATG ACGAGCAGAA
GGTTTGGGAC TTCCGCGAAG 701 AGAGCAACCG GATTGCATCG GACTCGCGCG
ATTATGTGTT TTATCAGAAT 751 ATGCGGGAAT TGATGCCCCG GGGGATGAAG
GCGAACAGTC TTGTGGTCGG 801 CTATGATGCG GACGGTCTGC CGCAAAAAGT
CTATTGGAGT TTCGACAATG 851 GAAAAAAACG CCAGAGTTTC GAATATTATT
TGAAAAACGG AAATCTTTTT 901 ATTGCACAAT CTTCGACGGT AGCATTGAAA
GCGGATGGCG TAACGGCGGA 951 TATGCAGACC TATCATGCGC AACAGACGTG
GTATTTGGAT GGCGGGCGGA 1001 TTATCCGCGA AGAGAAACAG GGAGACAGAC
TGCCTGATTT TCCTTTGAAC 1051 TTGGAAGATT TGGAAAAAGA GGTGAGCCGT
TATGCAGAGG CTGCGGCGAG 1101 ACGTTCGGGC GGCAGGCGCG GCCTTTCTCA
CTGA
This corresponds to the amino acid sequence <SEQ ID 2458; ORF
728>:
TABLE-US-02900 g728.pep 1 MFKKFKPVLL SFFALVFAFW LGTGIAYEIN
PRWFLSDTAT EVPENPNAFV 51 AKLARLFRNA DRAVVIVKES MRTEESLAGA
VDDGPLQSEK DYLALAIRLS 101 RLKEKAKWFH VTEQEHGEEV WLDYYIGEGG
LVAVSLSQRS PEAFVNAEYL 151 YRNDRPFSVN VYGGTAHGEN YETTGEYRVV
WQPDGSVFDA AGRGKIGEDV 201 YEHCLGCYQM AQVYLAKYRD VANDEQKVWD
FREESNRIAS DSRDYVFYQN 251 MRELMPRGMK ANSLVVGYDA DGLPQKVYWS
FDNGKKRQSF EYYLKNGNLF 301 IAQSSTVALK ADGVTADMQT YHAQQTWYLD
GGRIIREEKQ GDRLPDFPLN 351 LEDLEKEVSR YAEAAARRSG GRRGLSH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2459>:
TABLE-US-02901 m728.seq 1 ATGTTTAAAA AATTCAAACC GGTACTGTTG
TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACGG GTATTGCCTA
TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT GAAGTACCTA
AAAATCCGAA TGCTTTTGTG 151 GCGAAACTTG CCCGCCTGTT CCGAAATGCC
GACAGGGCGG TTGTCATCGT 201 GAAGGAATCG ATAAGGACGG AGGAAAATCT
TGCCGGAACT GTGGATGACG 251 GTCCGTTGCA GTCGGAGAAG GATTATCTCG
CGCTCGCTAT CCGGCTCAGT 301 CGTTTGAAAG AAAAGGCGAA ATGGTTTCAC
GTAACGGAGC AGGAACATGG 351 GAAAGAGGTT TGGCTGGATT ACCATATCGG
CGAGGGCGGT TTGGTTGCGG 401 TTTCGCTTTC GCAACGCTCG CCGGAAGCAT
TTGTTAATGC CGAATATCTG 451 TATCGGAACG ATCGTCCGTT TTCTGTAAAT
GTGTACGGCG GAACGGTTCA 501 CGGGGAAAAT TATGAAACGA CAGGAGAATA
TCGGGTTGTT TGGCAACCAG 551 ACGGTTCGGT ATTTGATGCG GCGGGGCGCG
GGAAAATCGG GGAAGATGTT 601 TATGAGCATT GCCTCGGGTG TTATCAGATG
GCCCAGGTAT ATTTGGCGAA 651 ATACCGGGAT GTCGCGAATG ACGAGCAGAA
GGTTTGGGAC TTCCGCAAAG 701 AGAGCAACCG AATTGCGTCG GACTCGCGCA
ATTCTGTGTT TTATCAGAAT 751 ATGCGGGAAT TGATGCCCCG AGGGATGAAG
GCGAACAGTC TTGTGGTCGG 801 CTATGATGCG GACGGTCTGC CGCAAAAAGT
CTATTGGAGT TTCGACAATG 851 GAAAAAAACG CCAGAGTTTC GAATATTATT
TGAAAAACGG AAATCTTTTT 901 ATTGCACAAT CTTCGACGGT AGCATTGAAA
GCGGATGGCG TAACGGCGGA 951 TATGCAGACC TATCATGCGC AACAGACGTG
GTATTTGGAT GGCGGGCGGA 1001 TTGTCCGCGA AGAGAAACAG GGAGACAGAC
TGCCTGATTT TCCTTTGAAC 1051 TTGGAAAATT TGGAAAAAGA GGTGCGCCGT
TATGCAGAGG CTGCGGCGAG 1101 ACGTTCGGGC GGCAGGCGCG ACCTTTCTCA
CTGA
This corresponds to the amino acid sequence <SEQ ID 2460; ORF
728>:
TABLE-US-02902 m728.pep 1 MFKKFKPVLL SFFALVFAFW LGTGIAYEIN
PRWFLSDTAT EVPKNPNAFV 51 AKLARLFRNA DRAVVIVKES IRTEENLAGT
VDDGPLQSEK DYLALAIRLS 101 RLKEKAKWFH VTEQEHGKEV WLDYHIGEGG
LVAVSLSQRS PEAFVNAEYL 151 YRNDRPFSVN VYGGTVHGEN YETTGEYRVV
WQPDGSVFDA AGRGKIGEDV 201 YEHCLGCYQM AQVYLAKYRD VANDEQKVWD
FRKESNRIAS DSRNSVFYQN 251 MRELMPRGMK ANSLVVGYDA DGLPQKVYWS
FDNGKKRQSF EYYLKNGNLF 301 IAQSSTVALK ADGVTADMQT YHAQQTWYLD
GGRIVREEKQ GDRLPDFPLN 351 LENLEKEVRR YAEAAARRSG GRRDLSH*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 728 shows 96.3% identity over a 377 aa overlap with a
predicted ORF (ORF728.a) from N. gonorrhoeae:
TABLE-US-02903 m728/g728 10 20 30 40 50 60 m728.pep
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPKNPNAFVAKLARLFRNA
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| g728
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPENPNAFVAKLARLFRNA 10 20
30 40 50 60 70 80 90 100 110 120 m728.pep
DRAVVIVKESIRTEENLAGTVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGKEV
||||||||||:||||:|||:|||||||||||||||||||||||||||||||||||||:|| g728
DRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGEEV 70 80
90 100 110 120 130 140 150 160 170 180 m728.pep
WLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV
||||:||||||||||||||||||||||||||||||||||||||||:|||||||||||||| g728
WLDYYIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTAHGENYETTGEYRVV 130
140 150 160 170 180 190 200 210 220 230 240 m728.pep
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFRKESNRIAS
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| g728
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFREESNRIAS 190
200 210 220 230 240 250 260 270 280 290 300 m728.pep
DSRNSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF |||:
|||||||||||||||||||||||||||||||||||||||||||||||||||||| g728
DSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF 250
260 270 280 290 300 310 320 330 340 350 360 m728.pep
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLENLEKEVRR
||||||||||||||||||||||||||||||||||:|||||||||||||||||:||||| | g728
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIIREEKQGDRLPDFPLNLEDLEKEVSR 310
320 330 340 350 360 370 m728.pep YAEAAARRSGGRRDLSHX |||||||||||||
|||| g728 YAEAAARRSG GRRGLSHX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2461>:
TABLE-US-02904 a728.seq 1 ATGTTTAAAA AATTCAAACC GGTACTGTTG
TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACGG GTATTGCCTA
TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT GAAAATCCGA
ATGCTTTTGT GGCGAAACTT 151 GCCCGCCTGT TCCGAAATGC CGACAGGGCG
GTTGTCATCG TGAAGGAATC 201 GATGAGGACG GAGGAAAGTC TTGCCGGAGC
TGTGGATGAC GGTCCGTTGC 251 AGTCGGAGAA GGATTATCTT GCACTCGCTG
TCCGGCTCAG TCGTTTGAAA 301 GAAAAGGCGA AATGGTTTCA CGTAACGGAG
CAGGAACATG GGGAAGAGGT 351 TTGGCTGGAT TACTATATCG GCGAGGGCGG
TTTGGTTGCG GTTTCGCTTT 401 CGCAACGCTC GCCGGAAGCG TTTGTTAATG
CCGAATATCT GTATCGGAAC 451 GATCGTCCGT TTTCTGTAAA TGTGTACGGC
GGAACGGTTC ACGGGGAAAA 501 TTATGAAACG ACAGGAGAAT ATCGGGTTGT
TTGGCAACCG GACGGTTCGG 551 TATTTGATGC GTCGGGGCGC GGGAAAATCG
GGGAAGATGT TTATGAGCAT 601 TGCCTCGGGT GTTATCAGAT GGCCCAGGTA
TATTTGGCGA AATATCGGGA 651 TGTCGCGAAT GATGAGCAGA AGGTTTGGGA
CTTCCGCGAA GAGAGTAACC 701 GGATTGCGTC GGACTCGCGC GATTCTGTGT
TTTATCAGAA TATGCGGGAA 751 TTGATGCCCC GAGGGATGAA GGCAAACAGT
CTTGTGGTCG GCTATGATGC 801 GGACGGTCTG CCGCAGAAAG TCTATTGGAG
TTTCGACAAT GGGAAAAAAC 851 GCCAGAGTTT CGAATATTAT TTGAAAAACG
GAAATCTTTT TATTGCACAA 901 TCTTCGACGG TAGCATTGAA AGCGGATGGC
GTAACGGCGG ATATGCAGAC 951 CTATCATGCG CAACAGACGT GGTATTTAGA
TGGCGGGCGG ATTGTCCGCG 1001 AAGAGAAACA GGGGGACAGA CTGCCTGATT
TTCCTTTGAA CTTGGAAGAT 1051 TTGGAAAAAG AGGTGAGCCG TTATGCAGAG
GCTGCGGCGA GACGTTCGGG 1101 CGGCAGGCGC GACCTTTCTC ACTGA
This corresponds to the amino acid sequence <SEQ ID 2462; ORF
728.a>:
TABLE-US-02905 a728.pep 1 MFKKFKPVLL SFFALVFAFW LGTGIAYEIN
PRWFLSDTAT ENPNAFVAKL 51 ARLFRNADRA VVIVKESMRT EESLAGAVDD
GPLQSEKDYL ALAVRLSRLK 101 EKAKWFHVTE QEHGEEVWLD YYIGEGGLVA
VSLSQRSPEA FVNAEYLYRN 151 DRPFSVNVYG GTVHGENYET TGEYRVVWQP
DGSVFDASGR GKIGEDVYEH 201 CLGCYQMAQV YLAKYRDVAN DEQKVWDFRE
ESNRIASDSR DSVFYQNMRE 251 LMPRGMKANS LVVGYDADGL PQKVYWSFDN
GKKRQSFEYY LKNGNLFIAQ 301 SSTVALKADG VTADMQTYHA QQTWYLDGGR
IVREEKQGDR LPDFPLNLED 351 LEKEVSRYAE AAARRSGGRR DLSH* a728/m728
96.3% identity in 377 aa overlap 10 20 30 40 50 a728.pep
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATE---NPNAFVAKLARLFRNA
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| m728
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPKNPNAFVAKLARLFRNA 10 20
30 40 50 60 60 70 80 90 100 110 a728.pep
DRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAVRLSRLKEKAKWFHVTEQEHGEEV
||||||||||:||||:|||:||||||||||||||||:||||||||||||||||||||:|| m728
DRAVVIVKESIRTEENLAGTVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGKEV 70 80
90 100 110 120 120 130 140 150 160 170 a728.pep
WLDYYIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| m728
WLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV 130
140 150 160 170 180 180 190 200 210 220 230 a728.pep
WQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFREESNRIAS
||||||||||:|||||||||||||||||||||||||||||||||||||||||:||||||| m728
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFRKESNRIAS 190
200 210 220 230 240 240 250 260 270 280 290 a728.pep
DSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m728
DSRNSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF 250
260 270 280 290 300 300 310 320 330 340 350 a728.pep
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLEDLEKEVSR
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| | m728
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLENLEKEVRR 310
320 330 340 350 360 360 370 a728.pep YAEAAARRSGGRRDLSHX
|||||||||||||||||| m728 YAEAAARRSGGRRDLSHX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2463>:
TABLE-US-02906 g729.seq 1 ATGAATACTA CATTGAAAAC TACCTTGACC
TCTGTTGCAG CAGCCTTTGC 51 ATTGTCTGCC TGCACCATGA TTCCTCAATA
CGAGCAGCCC AAAGTCGAAG 101 TTGCGGAAAC CTTCCAAAAC GACACATCGG
TTTCTTCCAT CCGCGCGGTT 151 GATTTGGGTT GGCATGACTA TTTTGCCGAC
CCGCGCCTGC AAAAGCTGAT 201 CGACATCGCA CTCGAGCGCA ATACCAGTTT
GCGTACAGCC GTATTGAACA 251 GCGAAATCTA CCGCAAACAA TACATGATCG
AGCGCAACAA CCTCCTGCCC 301 ACGCTTGCCG CCAATGCGAA CGGCTCGCGC
CAAGGCAGCT TGAGCGGCgg 351 caaTGTCAGC AGCAGCTACA ATGTCGGACT
GGGTGcGGca tCTTACGAAC 401 TCGATCTGTT CgGGCGCGTG CGCagcaacA
GcgaagcAGC ACTGcaggGC 451 tATTTTGCCA GCGTTGCCAA CcgcGATGCG
GCACATTTGa ttCtGATTGC 501 CACCGTTGCC AAAGCCTATT TCAAcgaGcG
TTATGCCGAA AAAGcgatgT 551 CTTTGGCGCa gcGTGTCTTG AAAACGCGCG
AGGAAACCTA CAAGCTGTCC 601 GAATTGCGGT ACAAGGCAGG CGTGATTTCC
GCCGTCGCCC TGCGCCAGCA 651 GGAAGCCTTG ATTGAATCTG CCAAAGCCGA
TTATGCCCAT GCCGCGCGCa 701 gcCGCGAACA GGCGCGCAAT GCCTTGGCAA
CCTTGATTAA ccGTCCGATA 751 CCCGAagaCC TGCCCGCCGG TTTGCCGTTG
GACAagcAGT TTTTTGTTGA 801 AAAACTGCCT GCCGGTTTGA GTTCCGAAGT
ATTGCTCGAC CGTCCCGACA 851 TCCGCGCCGC CGAACACGCG CTCAAACAGG
CAAACGCCAA TATCGGTGCG 901 gcgCGCGCCg ccTTTTTCCC GTCCATCCGC
CTGACCGGAA GCGTCGGTAC 951 GGGTTCTGTC GAATTGGGCG GGCTGTTCAA
AAGCGGCACG GGCGTTTGGG 1001 CGTTCGCTCC GTCTATTACC CTGCCGATTT
TTACTTGGGG AACGAACAAG 1051 GCGAACCTTG ATGTGGCAAA ACTGCGCCAA
CAGGCACAAA TTGTTGCCTA 1101 TGAATCCGCC GTCCAATCCG CCTTTCAAGA
CGTGGCAAAC GCATTGGCGG 1151 CGCGCGAGCA GCTGGATAAA GCCTATGACG
CTTTAAGCAA ACAAAGCCGC 1201 GCCTCTAAAG AAGCGTTGCG CTTGGTCGGA
CTGCGTTACA AACACGGCGT 1251 ATCCGGCGCG CTCGATTTGC TCGATGCGGA
ACGCATCAGC TATTCGGCGG 1301 AAGGTGCGGC TTTGTCGGCA CAACTGACCC
GCGCCGAAAA CCTTGCCGAT 1351 TTGTACAAGG CGCTCgacGG CGGATTGAAA
CGGGATACCC AAACCGGCAA 1401 ATAA
This corresponds to the amino acid sequence <SEQ ID 2464; ORF
729>:
TABLE-US-02907 g729.pep 1 MNTTLKTTLT SVAAAFALSA CTMIPQYEQP
KVEVAETFQN DTSVSSIRAV 51 DLGWHDYFAD PRLQKLIDIA LERNTSLRTA
VLNSEIYRKQ YMIERNNLLP 101 TLAANANGSR QGSLSGGNVS SSYNVGLGAA
SYELDLFGRV RSNSEAALQG 151 YFASVANRDA AHLILIATVA KAYFNERYAE
KAMSLAQRVL KTREETYKLS 201 ELRYKAGVIS AVALRQQEAL IESAKADYAH
AARSREQARN ALATLINRPI 251 PEDLPAGLPL DKQFFVEKLP AGLSSEVLLD
RPDIRAAEHA LKQANANIGA 301 ARAAFFPSIR LTGSVGTGSV ELGGLFKSGT
GVWAFAPSIT LPIFTWGTNK 351 ANLDVAKLRQ QAQIVAYESA VQSAFQDVAN
ALAAREQLDK AYDALSKQSR 401 ASKEALRLVG LRYKHGVSGA LDLLDAERIS
YSAEGAALSA QLTRAENLAD 451 LYKALDGGLK RDTQTGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2465>:
TABLE-US-02908 m729.seq 1 ATGGATACTA CATTGAAAAC CACCTTGACT
TCTGTTGCAG CAGCCTTTGC 51 ATTGTCTGCC TGCACCATGA TTCCCCAATA
CGAGCAGCCC AAAGTCGAAG 101 TTGCCGAAAC GTTCAAAAAC GATACCGCCG
ACAGCGGCAT CCGCGCCGTC 151 GATTTAGGTT GGCATGACTA TTTTGCCGAC
CCGCGCCTGC AAAAGCTGAT 201 CGACATCGCA CTCGAGCGCA ATACCAGTTT
GCGTACCGCC GTATTGAACA 251 GCGAAATCTA CCGCAAACAA TACATGATTG
AGCGCAACAA CCTCCTGCCC 301 ACGCTTGCCG CCAATGCGAA CGACTCGCGC
CAAGGCAGCT TGAGCGGCGG 351 CAATGTAAGC AGCAGCTACA AAGTCGGACT
GGGTGCGGCA TCTTACGAAC 401 TCGATCTGTT CGGGCGTGTA CGCAGCAGCA
GCGAGGCGGC ACTGCAAGGC 451 TATTTCGCCA GCACCGCCAA CCGCGATGCG
GCACATTTGA GCCTGATTGC 501 CACCGTTGCC AAAGCCTATT TCAACGAACG
TTACGCCGAA GAAGCGATGT 551 CTTTGGCGCA ACGTGTTTTG AAAACGCGCG
AGGAAACCTA CAAGCTGTCC 601 GAATTACGTT ACAAGGCAGG CGTGATTTCC
GCCGTCGCCC TACGTCAGCA 651 GGAAGCCCTG ATCGAATCTG CCAAAGCCGA
TTATGCCCAT GCCGCGCGCA 701 GCCGCGAACA GGCGCGCAAT GCCTTGGCAA
CCTTGATTAA CCAACCGATA 751 CCCGAAGACC TGCCTGCCGG TTTGCCGCTG
GACAAGCAGT TTTTTGTTGA 801 AAAACTGCCG GCCGGTTTGA GTTCCGAAGT
ATTGCTCGAC CGTCCCGATA 851 TCCGTGCTGC CGAACACGCG CTCAAACAGG
CAAACGCCAA TATCGGTGCG 901 GCACGCGCCG CCTTTTTCCC ATCCATCCGC
CTGACCGGAA CCGTCGGTAC 951 GGGTTCTGCC GAATTGGGTG GGTTGTTCAA
AAGCGGCACG GGCGTTTGGT 1001 CGTTCGCGCC GTCTATTACC CTGCCGATTT
TTACCTGGGG TACGAACAAG 1051 GCGAACCTTG ATGTAGCCAA GCTGCGCCAA
CAGGTACAAA TCGTTGCCTA 1101 TGAATCCGCC GTCCAATCCG CATTTCAAGA
CGTGGCAAAC GCATTGGCGG 1151 CGCGCGAGCA GCTGGATAAA GCCTATGACG
CTTTAAGCAA ACAAAGCCGC 1201 GCCTCTAAAG AAGCGTTGCG CTTGGTCGGC
CTGCGTTACA AGCACGGCGT 1251 ATCCGGCGCG CTCGACTTGC TCGATGCGGA
ACGCAGCAGC TATGCGGCGG 1301 AGGGTGCGGC TTTGTCGGCA CAACTGACCC
GCGCCGAAAA CCTTGCCGAT 1351 TTGTACAAGG CACTCGGCGG CGGATTGAAA
CGGGATACCC AAACCGACAA 1401 ATAA
This corresponds to the amino acid sequence <SEQ ID 2466; ORF
729>:
TABLE-US-02909 m729.pep 1 MDTTLKTTLT SVAAAFALSA CTMIPQYEQP
KVEVAETFKN DTADSGIRAV 51 DLGWHDYFAD PRLQKLIDIA LERNTSLRTA
VLNSEIYRKQ YMIERNNLLP 101 TLAANANDSR QGSLSGGNVS SSYKVGLGAA
SYELDLFGRV RSSSEAALQG 151 YFASTANRDA AHLSLIATVA KAYFNERYAE
EAMSLAQRVL KTREETYKLS 201 ELRYKAGVIS AVALRQQEAL IESAKADYAH
AARSREQARN ALATLINQPI 251 PEDLPAGLPL DKQFFVEKLP AGLSSEVLLD
RPDIRAAEHA LKQANANIGA 301 ARAAFFPSIR LTGTVGTGSA ELGGLFKSGT
GVWSFAPSIT LPIFTWGTNK 351 ANLDVAKLRQ QVQIVAYESA VQSAFQDVAN
ALAAREQLDK AYDALSKQSR 401 ASKEALRLVG LRYKHGVSGA LDLLDAERSS
YAAEGAALSA QLTRAENLAD 451 LYKALGGGLK RDTQTDK*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 729 shows 95.7% identity over a 467 aa overlap with a
predicted ORF (ORF729.a) from N. gonorrhoeae:
TABLE-US-02910 m729/g729 95.7% identity in 467 aa overlap 10 20 30
40 50 60 m729.pep
MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTADSGIRAVDLGWHDYFAD
|:||||||||||||||||||||||||||||||||||||:|||: |:|||||||||||||| g729
MNTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFQNDTSVSSIRAVDLGWHDYFAD 10 20
30 40 50 60 70 80 90 100 110 120 m729.pep
PRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSLSGGNVS
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| g729
PRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANGSRQGSLSGGNVS 70 80
90 100 110 120 130 140 150 160 170 180 m729.pep
SSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAE
|||:||||||||||||||||||:|||||||||||:|||||||| |||||||||||||||| g729
SSYNVGLGAASYELDLFGRVRSNSEAALQGYFASVANRDAAHLILIATVAKAYFNERYAE 130
140 150 160 170 180 190 200 210 220 230 240 m729.pep
EAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARN
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g729
KAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARN 190
200 210 220 230 240 250 260 270 280 290 300 m729.pep
ALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGA
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| g729
ALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGA 250
260 270 280 290 300 310 320 330 340 350 360 m729.pep
ARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQ
|||||||||||||:|||||:|||||||||||||:|||||||||||||||||||||||||| g729
ARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQ 310
320 330 340 350 360 370 380 390 400 410 420 m729.pep
QVQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGA
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g729
QAQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGA 370
380 390 400 410 420 430 440 450 460 m729.pep
LDLLDAERSSYAAEGAALSAQLTRAENLADLYKALGGGLKRDTQTDKX ||||||||
||:||||||||||||||||||||||| ||||||||| || g729
LDLLDAERISYSAEGAALSAQLTRAENLADLYKALDGGLKRDTQTGKX 430 440 450
460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2467>:
TABLE-US-02911 a729.seq 1 ATGGATACTA CATTGAAAAC CACCTTGACT
TCTGTTGCAG CAGCCTTCGC 51 ATTATCCGCC TGCACCATGA TTCCCCAATA
CGAGCAGCCC AAAGTCGAAG 101 TTGCCGAAAC GTTCAAAAAC GATACCGCCG
ACAGCGGCAT CCGTGCGGTC 151 GATTTGGGTT GGCATGACTA TTTTGCCGAC
CCGCGCCTGC AAAAGCTGAT 201 CGACATCGCA CTCGAGCGCA ATACCAGTTT
GCGTACCGCC GTATTGAACA 251 GCGAAATCTA CCGCAAACAA TACATGATTG
AGCGCAACAA CCTCCTGCCC 301 ACGCTTGCCG CCAATGCGAA CGACTCGCGC
CAAGGCAGCT TGAGCGGCGG 351 CAATGTAAGC AGCAGCTACA AAGTCGGACT
GGGTGCGGCA TCTTACGAAC 401 TCGATCTGTT CGGGCGTGTA CGCAGCAGCA
GCGAGGCGGC ACTGCAAGGC 451 TATTTCGCCA GCACCGCCAA CCGCGATGCG
GCACATTTGA GCCTGATTGC 501 CACCGTTGCC AAAGCCTATT TCAACGAACG
TTATGCCGAA GAAGCGATGT 551 CTTTGGCGCA ACGTGTTTTG AAAACGCGCG
AGGAAACCTA CAAGCTGTCC 601 GAATTACGTT ACAAGGCAGG CGTGATTTCC
GCCGTCGCCC TACGTCAGCA 651 GGAAGCCCTA ATCGAATCTG CCAAAGCCGA
TTATGCCCAT GCCGCGCGCA 701 GCCGCGAACA GGCGCGCAAT GCCTTGGCAA
CCCTGATTAA CCAACCGATA 751 CCCGACGACC TGCCCGCCGG TTTGCCGTTG
GACAAGCAGT TTTTTGTTGA 801 GAAGCTGCCG GCCGGTTTGA GTTCCGAAGT
ATTGCTCGAC CGTCCCGATA 851 TCCGTGCTGC CGAACACGCG CTCAAACAGG
CAAACGCCAA TATCGGTGCG 901 GCACGCGCCG CCTTTTTCCC ATCCATCCGC
CTGACCGGAA GCGTCGATAC 951 GCATTCTGCC GAATTGGGCG GGCTGTTCAA
AAGCGGCACC GGCGTTTGGT 1001 TGTTCGCACC TTCCATTACC CTGCCGATTT
TTACCTGGGG TACGAACAAG 1051 GCGAACCTCG ATGTAGCCAA GCTGCGCCAA
CAGGCACAAA TCGTTGCCTA 1101 TGAAGCCGCC GTCCAATCCG CATTTCAAGA
CGTGGCAAAC GCATTGACCG 1151 CGCGCGAGCA GTTGGATAAA GCCTATGACG
CTTTAAGCAA ACAAAGCCGC 1201 GCCTCTAAAG AAGCGTTGCG TTTGGTCGGT
CTGCGTTACA AACACGGCGT 1251 ATCCGGCGCG CTCGACTTGC TCGATGCGGA
ACGCAGCAGC TATTCGGCGG 1301 AAGGTGCGGC TTTGTCGGCA CAACTGACCC
GCGCCGAAAA CCTTGCCGAT 1351 TTGTACAAGG CACTCGGCGG CGGATTGAAA
CGGGATACCC AAACCGACAA 1401 ATAA
This corresponds to the amino acid sequence <SEQ ID 2468; ORF
729.a>:
TABLE-US-02912 a729.pep 1 MDTTLKTTLT SVAAAFALSA CTMIPQYEQP
KVEVAETFKN DTADSGIRAV 51 DLGWHDYFAD PRLQKLIDIA LERNTSLRTA
VLNSEIYRKQ YMIERNNLLP 101 TLAANANDSR QGSLSGGNVS SSYKVGLGAA
SYELDLFGRV RSSSEAALQG 151 YFASTANRDA AHLSLIATVA KAYFNERYAE
EAMSLAQRVL KTREETYKLS 201 ELRYKAGVIS AVALRQQEAL IESAKADYAH
AARSREQARN ALATLINQPI 251 PDDLPAGLPL DKQFFVEKLP AGLSSEVLLD
RPDIRAAEHA LKQANANIGA 301 ARAAFFPSIR LTGSVDTHSA ELGGLFKSGT
GVWLFAPSIT LPIFTWGTNK 351 ANLDVAKLRQ QAQIVAYEAA VQSAFQDVAN
ALTAREQLDK AYDALSKQSR 401 ASKEALRLVG LRYKHGVSGA LDLLDAERSS
YSAEGAALSA QLTRAENLAD 451 LYKALGGGLK RDTQTDK* a729/m729 98.1%
identity in 467 aa overlap 10 20 30 40 50 60 a729.pep
MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTADSGIRAVDLGWHDYFAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m729
MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTADSGIRAVDLGWHDYFAD 10 20
30 40 50 60 70 80 90 100 110 120 a729.pep
PRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSLSGGNVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m729
PRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANDSRQGSLSGGNVS 70 80
90 100 110 120 130 140 150 160 170 180 a729.pep
SSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m729
SSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDAAHLSLIATVAKAYFNERYAE 130
140 150 160 170 180 190 200 210 220 230 240 a729.pep
EAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m729
EAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIESAKADYAHAARSREQARN 190
200 210 220 230 240 250 260 270 280 290 300 a729.pep
ALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGA
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| m729
ALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGA 250
260 270 280 290 300 310 320 330 340 350 360 a729.pep
ARAAFFPSIRLTGSVDTHSAELGGLFKSGTGVWLFAPSITLPIFTWGTNKANLDVAKLRQ
|||||||||||||:| | ||||||||||||||| |||||||||||||||||||||||||| m729
ARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWSFAPSITLPIFTWGTNKANLDVAKLRQ 310
320 330 340 350 360 370 380 390 400 410 420 a729.pep
QAQIVAYEAAVQSAFQDVANALTAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGA
|:||||||:|||||||||||||:||||||||||||||||||||||||||||||||||||| m729
QVQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGA 370
380 390 400 410 420 430 440 450 460 a729.pep
LDLLDAERSSYSAEGAALSAQLTRAENLADLYKALGGGLKRDTQTDKX
|||||||||||:|||||||||||||||||||||||||||||||||||| m729
LDLLDAERSSYAAEGAALSAQLTRAENLADLYKALGGGLKRDTQTDKX 430 440 450
460
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2469>:
TABLE-US-02913 g730.seq 1 GTGAAACCGC TGCGCAGACT GACAAACCTC
CTTGCCGCCT GCGCCGTAGC 51 GGCGGTCGCA CTCATACAGC CCGCCCTCGC
GGCGGACTTG GCGCAAGACC 101 CGTTCATTAC CGATAACACC CAACGGCAGC
ACTACGAACC CGGCGGCAAA 151 TACCACCTCT TCGGcgaCCC GCGCGGCAGC
GTTTCCGACC GCACCGGCAA 201 AATCAACGTC ATCCAAGACT ATACCCACCA
GATGGGCAAC CTGCTCATCC 251 AACAGGCGGC AATCCAAGGC AATCTTGGTT
ACACCGTCCG CTTTTCCGGA 301 CACGGACACG AAGAACACGC CCCCTTCGAC
AACCACGCCG CCGACAGCGC 351 AAGCGAAGAA AAAGGCAACG TTGACGACGG
CTTTACCGTG TACCGGCTCA 401 ACTGGGAAGG ACACGAACAT CATCCCGCCG
ATGCCTACGA CGGCCCGAAG 451 GGCGGCAATT ACCCCAAACC TACGGGCGCA
CGAGACGAAT ACACCTATCA 501 CGTCAACGGC ACAGCCCGCA GTATCAAACT
CAATCCGACC GACACCCGCA 551 GCATCCGGCA ACGCATATTC GACAACTACA
ACAACCTCGG CAGCAATTTC 601 TCCGACCGCG CCGATGAAGC CAACAGAAAA
ATGTTCGAGC ACAATGCCAA 651 GCTCGACCGC TGGGGCAACA GCATGGAGTT
TGTCAACGGC GTCGCCGCCG 701 GCGCGCTCAA CCCCTTTATC AGCGCGGGCG
AAGCCTTGGG CATAGGCGAC 751 ATACTGTACG GAACGCGCTA TGCCATAGAC
AAAGCCGCGA TGCGCAACAT 801 CGCCCCCTTA CCCGCCGAGG GCAAATTCGC
CGCCATCGGC GGCTTGGGCA 851 GCGCGGCGGG CTTTGAAAAA AATACGCGCG
AAGCCGTTGA CCGGTGGATA 901 CAGGAAAACC CCAATGCCGC CGAAACCGTC
GAAGCCCTGG TCAACGTCCT 951 GCCGTTTGCC AAAGTCAAAA ACCTGACAAA
GGCGGCAAAA CCGGGGAAGG 1001 CTGCGGTTAG TGGGGATTTT TCTAAATCCT
ACACCTGCTC CTTCCACGGC 1051 AGCACCTTGG TCAAAACGGC AGACGGCTAC
AAAGCCATTG CCCATATTCA 1101 AGCCGGAGAC CGCGTCCTTT CCAAGGACGA
GGCAAGCGGA GAAACGGGAT 1151 ACAAACCCGT TACCGCCCGA TACGGCAATC
CGTATCAAGA AACCGTTTAC 1201 ATTGAAGTTT CAGACGGCAT CGGCAACAGC
CAAACCCTGA TTTCCAACCG 1251 CATCCACCCG TTTTATTCGG ACGGCAAATG
GATTAAGGCG GAAGATTTAA 1301 AAGCGGGAAG CCGGCTGTTA TCCGAAAGCG
GCAAAACCCA AACCGTCCGC 1351 AACATCGTTG TCAAACCAAA ACCGCTCAAA
GCCTACAATC TGACCGTTGC 1401 CGATTGGCAT ACCTACTTCG TCAAGGGTAA
TCAGGCGGAA ACGGAAGGGG 1451 TTTGGGTTCA TAATGATTGT CCGCCTAAAC
CAAAACCAAC CAATCATGCC 1501 CAACAAAGAA AAGAAGAAGC TAAAAACGAT
TCTCATCGAA GTGTGGGAGA 1551 TTCCAATCGT GTCGTTCGCG AAGGAAAGCA
ATATTTAGAT TCCGACACAG 1601 GAAACCATGT TTATGTAAAA GGAGATAAAG
TGGTTATTCT AACTCCTGAT 1651 GGAAGACAGG TAACTCAATT TAAGAACTCG
AAAGCCAATA CGTCAAAAAG 1701 GGTAAAAAAT GGGAAATGGA CACCAAAATA A
This corresponds to the amino acid sequence <SEQ ID 2470; ORF
730.ng>:
TABLE-US-02914 g730.pep 1 VKPLRRLTNL LAACAVAAVA LIQPALAADL
AQDPFITDNT QRQHYEPGGK 51 YHLFGDPRGS VSDRTGKINV IQDYTHQMGN
LLIQQAAIQG NLGYTVRFSG 101 HGHEEHAPFD NHAADSASEE KGNVDDGFTV
YRLNWEGHEH HPADAYDGPK 151 GGNYPKPTGA RDEYTYHVNG TARSIKLNPT
DTRSIRQRIF DNYNNLGSNF 201 SDRADEANRK MFEHNAKLDR WGNSMEFVNG
VAAGALNPFI SAGEALGIGD 251 ILYGTRYAID KAAMRNIAPL PAEGKFAAIG
GLGSAAGFEK NTREAVDRWI 301 QENPNAAETV EALVNVLPFA KVKNLTKAAK
PGKAAVSGDF SKSYTCSFHG 351 STLVKTADGY KAIAHIQAGD RVLSKDEASG
ETGYKPVTAR YGNPYQETVY 401 IEVSDGIGNS QTLISNRIHP FYSDGKWIKA
EDLKAGSRLL SESGKTQTVR 451 NIVVKPKPLK AYNLTVADWH TYFVKGNQAE
TEGVWVHNDC PPKPKPTNHA 501 QQRKEEAKND SHRSVGDSNR VVREGKQYLD
SDTGNHVYVK GDKVVILTPD 551 GRQVTQFKNS KANTSKRVKN GKWTPK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2471>:
TABLE-US-02915 m730.seq 1 GTGAAACCGC TGCGCAGACT GACAAACCTC
CTTGCCGCCT GCGCCGTAGC 51 GGCGGCCGCA CTCATACAGC CCGCCCTCGC
GGCGGACTTG GCGCAAGACC 101 CGTTCATTAC CGATAACGCC CAACGGCAGC
ACTACGAACC CGGCGGCAAA 151 TACCACCTCT TCGGCGACCC GCGCGGCAGC
GTTTCCGACC GCACCGGCAA 201 AATCAACGTC ATCCAAGACT ATACCCACCA
GATGGGCAAC CTGCTCATCC 251 AACAGGCAAA CATCAACGGC ACAATCGGCT
ACCACACCCG CTTTTCCGGA 301 CACGGACACG AAGAACACGC CCCCTTCGAC
AACCACGCCG CCGACAGCGC 351 GAGCGAAGAA AAAGGCAACG TTGACGAAGG
CTTTACCGTA TACCGGCTCA 401 ACTGGGAAGG ACACGAACAT CATCCCGCCG
ATGCCTACGA CGGCCCGAAG 451 GGCGGCAATT ACCCCAAACC TACGGGCGCA
CGAGACGAAT ACACCTATCA 501 CGTCAACGGC ACAGCCCGCA GTATCAAACT
CAATCCGACC GACACCCGCA 551 GCATCCGGCA ACGCATATCC GACAATTACA
GCAACCTCGG CAGCAATTTC 601 TCCGACCGCG CCGATGAAGC CAACAGAAAA
ATGTTCGAGC ACAATGCCAA 651 GCTCGACCGC TGGGGCAACA GCATGGAGTT
TATCAACGGC GTCGCCGCCG 701 GCGCGCTCAA CCCCTTTATC AGCGCGGGCG
AAGCCTTGGG CATAGGCGAC 751 ATACTGTACG GAACGCGCTA TGCCATAGAC
AAAGCCGCAA TGCGCAACAT 801 CGCCCCCTTG CCCGCCGAGG GCAAATTCGC
CGTCATCGGC GGCTTGGGCA 851 GCGTGGCGGG CTTTGAAAAG AATACGCGCG
AAGCCGTTGA CCGGTGGATA 901 CAGGAAAATC CCAATGCCGC CGAAACCGTC
GAAGCCGTCT TCAACGTTGC 951 CGCAGCAGCC AAAGTCGCGA AGTTGGCAAA
GGCGGCAAAA CCAGGGAAGG 1001 CTGCGGTTAG CGGGGATTTT GCTGATTCTT
ATAAAAAGAA ATTGGCTTTG 1051 TCTGATAGTG CGAGACAGTT ATATCAAAAT
GCAAAGTATA GAGAAGCTCT 1101 AGATATACAT TATGAAGATT TAATTAGAAG
AAAAACTGAT GGTTCATCAA 1151 AATTTATTAA CGGCAGAGAA ATTGACGCTG
TTACGAATGA TGCTTTAATA 1201 CAAGCCAAAA GAACAATTTC AGCAATAGAT
AAACCTAAAA ATTTCTTAAA 1251 TCAAAAAAAT AGAAAGCAAA TTAAAGCAAC
CATCGAAGCA GCAAACCAAC 1301 AGGGAAAACG TGCAGAATTT TGGTTTAAAT
ACGGTGTTCA TTCACAAGTT 1351 AAGTCATATA TTGAATCAAA AGGCGGCATT
GTTAAAACAG GTTTAGGAGA 1401 TTAA
This corresponds to the amino acid sequence <SEQ ID 2472; ORF
730>:
TABLE-US-02916 m730.pep 1 VKPLRRLTNL LAACAVAAAA LIQPALAADL
AQDPFITDNA QRQHYEPGGK 51 YHLFGDPRGS VSDRTGKINV IQDYTHQMGN
LLIQQANING TIGYHTRFSG 101 HGHEEHAPFD NHAADSASEE KGNVDEGFTV
YRLNWEGHEH HPADAYDGPK 151 GGNYPKPTGA RDEYTYHVNG TARSIKLNPT
DTRSIRQRIS DNYSNLGSNF 201 SDRADEANRK MFEHNAKLDR WGNSMEFING
VAAGALNPFI SAGEALGIGD 251 ILYGTRYAID KAAMRNIAPL PAEGKFAVIG
GLGSVAGFEK NTREAVDRWI 301 QENPNAAETV EAVFNVAAAA KVAKLAKAAK
PGKAAVSGDF ADSYKKKLAL 351 SDSARQLYQN AKYREALDIH YEDLIRRKTD
GSSKFINGRE IDAVTNDALI 401 QAKRTISAID KPKNFLNQKN RKQIKATIEA
ANQQGKRAEF WFKYGVHSQV 451 KSYIESKGGI VKTGLGD* g730/m730 93.0%
identity in 344 aa overlap 10 20 30 40 50 60 g730.pep
VKPLRRLTNLLAACAVAAVALIQPALAADLAQDPFITDNTQRQHYEPGGKYHLFGDPRGS
||||||||||||||||||:||||||||||||||||||||:|||||||||||||||||||| m730
VKPLRRLTNLLAACAVAAAALIQPALAADLAQDPFITDNAQRQHYEPGGKYHLFGDPRGS 10 20
30 40 50 60 70 80 90 100 110 120 g730.pep
VSDRTGKINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHGHEEHAPFDNHAADSASEE
|||||||||||||||||||||||||| |:|::|| :|||||||||||||||||||||||| m730
VSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHGHEEHAPFDNHAADSASEE 70 80
90 100 110 120 130 140 150 160 170 180 g730.pep
KGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGARDEYTYHVNGTARSIKLNPT
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| m730
KGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGARDEYTYHVNGTARSIKLNPT 130
140 150 160 170 180 190 200 210 220 230 240 g730.pep
DTRSIRQRIFDNYNNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFVNGVAAGALNPFI
||||||||| |||:|||||||||||||||||||||||||||||||||:|||||||||||| m730
DTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFINGVAAGALNPFI 190
200 210 220 230 240 250 260 270 280 290 300 g730.pep
SAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKFAAIGGLGSAAGFEKNTREAVDRWI
|||||||||||||||||||||||||||||||||||||:||||||:||||||||||||||| m730
SAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKFAVIGGLGSVAGFEKNTREAVDRWI 250
260 270 280 290 300 310 320 330 340 350 360 g730.pep
QENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDFSKSYTCSFHGSTLVKTADGY
||||||||||||: || ||| :|:||||||||||||||: || m730
QENPNAAETVEAVFNVAAAAKVAKLAKAAKPGKAAVSGDFADSYKKKLALSDSARQLYQN 310
320 330 340 350 360 370 380 390 400 410 420 g730.pep
KAIAHIQAGDRVLSKDEASGETGYKPVTARYGNPYQETVYIEVSDGIGNSQTLISNRIHP m730
AKYREALDIHYEDLIRRKTDGSSKFINGREIDAVTNDALIQAKRTISAIDKPKNFLNQKN 370
380 390 400 410 420
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2473>:
TABLE-US-02917 a730.seq 1 GTGAAACCGC TGCGAAGACT CATCAAGCTC
CTTGCCGCCT GTGCCGTAGC 51 GGCGGCCGCA CTCATACAGC CCGCCCTCGC
GGCGGACTTG GCGCAAGACC 101 CGTTCATTAC CGATAACGCC CAACGGCAGC
ACTACGAACC CGGAGGCAAA 151 TACCACCTCT TCGGCGACCC GCGCGGCAGC
GTCTCCGACC GCACCGGTCA 201 AATCAACGTC ATCCAAGACT ATACCCACCG
GATGGGCAAC CTGCTCATCC 251 AGCAGGCAAA CATCAACGGC ACAATCGGCT
ACCACACCCG CTTTTCCGGA 301 CACGGATACG AAGAACACGC CCCCTTCGAC
AACCACGCCG CCGACAGCGC 351 GAGCGAAGAA AAAGGCAACG TTGACGAAGG
CTTTACCGTA TACCGGCTCA 401 ACTGGGAAGG ACACGAACAT CATCCCGCCG
ATGCCTACGA CGGCCCGAAG 451 GGCGGCAATT ACCCCAAACC TACGGGTGCA
CGCGACGAAT ACACCTATCA 501 CGTCAACGGC ACAGCACGCA GCATCAAACT
CAATCCGACC GACACCCGCA 551 GCATCCGGCA ACGCATATCC GACAATTACA
GCAACCTCGG CAGCAATTTC 601 TCCGACCGCG CCGATGAAGC CAACAGAAAA
ATGTTCGAGC ACAATGCCAA 651 GCTCGACCGC TGGGGCAACA GCATGGAGTT
TATCAACGGC GTCGCCGCCG 701 GCGCGCTCAA CCCCTTTATC AGCGCGGGCG
AAGCCTTGGG CATAGGCGAC 751 ATACTGTACG GAACGCGCTA TGCCATAGAC
AAAGCCGCAA TGCGCAACAT 801 CGCCCCCTTG CCCGCCGAGG GCAAATTCGC
CGTCATCGGC GGCTTGGGCA 851 GCGTGGCGGG CTTTGAAAAA AATACGCGCG
AAGCCGTTGA CCGGTGGATA 901 CAGGAAAACC CCAATGCCGC CGAAACCGTC
GAAGCCCTGG TCAACGTCCT 951 GCCGTTTGCC AAAGTCAAAA ACCTGACAAA
GGCGGCAAAA CCGGGGAAGG 1001 CTGCGGTTAG CGGGGATTTT TCTGCTGCAT
ACAATACAAG AACAACTAGA 1051 AAAGTTACTA CAGAAACAGA GGGGTTAAAT
AGAATCAGAC AGAACCAGAA 1101 AAATAGTAAT ATACATGAGA AAAATTATGG
AAGAGATAAT CCTAATCATA 1151 TTAATGTTTT ATCTGGAAAT TCTATACAAC
ATATACTGTA TGGAGATGAA 1201 GCAGGAGGTG GGCATCTTTT TCCTGGCAAA
CCTGGTAAGA CAACATTCCC 1251 CCAACATTGG TCAGCCAGTA AAATAACTCA
TGAAATTAGT GATATCGTTA 1301 CATCCCCAAA AACGCAATGG TATGCACAGA
CTGGAACAGG CGGCAAATAT 1351 ATTGCTAAAG GAAGACCAGC TAGGTGGGTA
TCATATGAAA CGAGAGATGG 1401 AATTCGTATC AGAACAGTTT ATGAACCTGC
AACAGGAAAA GTGGTAACTG 1451 CATTCCCCGA TAGAACCTCT AATCCCAAAT
ATAACCCTGT AAAATAA
This corresponds to the amino acid sequence <SEQ ID 2474; ORF
730.a>:
TABLE-US-02918 a730.pep 1 VKPLRRLIKL LAACAVAAAA LIQPALAADL
AQDPFITDNA QRQHYEPGGK 51 YHLFGDPRGS VSDRTGQINV IQDYTHRMGN
LLIQQANING TIGYHTRFSG 101 HGYEEHAPFD NHAADSASEE KGNVDEGFTV
YRLNWEGHEH HPADAYDGPK 151 GGNYPKPTGA RDEYTYHVNG TARSIKLNPT
DTRSIRQRIS DNYSNLGSNF 201 SDRADEANRK MFEHNAKLDR WGNSMEFING
VAAGALNPFI SAGEALGIGD 251 ILYGTRYAID KAAMRNIAPL PAEGKFAVIG
GLGSVAGFEK NTREAVDRWI 301 QENPNAAETV EALVNVLPFA KVKNLTKAAK
PGKAAVSGDF SAAYNTRTTR 351 KVTTETEGLN RIRQNQKNSN IHEKNYGRDN
PNHINVLSGN SIQHILYGDE 401 AGGGHLFPGK PGKTTFPQHW SASKITHEIS
DIVTSPKTQW YAQTGTGGKY 451 IAKGRPARWV SYETRDGIRI RTVYEPATGK
VVTAFPDRTS NPKYNPVK* a730/m730 88.6% identity in 376 aa overlap 10
20 30 40 50 60 a730.pep
VKPLRRLIKLLAACAVAAAALIQPALAADLAQDPFITDNAQRQHYEPGGKYHLFGDPRGS
||||||| :||||||||||||||||||||||||||||||||||||||||||||||||||| m730
VKPLRRLTNLLAACAVAAAALIQPALAADLAQDPFITDNAQRQHYEPGGKYHLFGDPRGS 10 20
30 40 50 60 70 80 90 100 110 120 a730.pep
VSDRTGQINVIQDYTHRMGNLLIQQANINGTIGYHTRFSGHGYEEHAPFDNHAADSASEE
||||||:|||||||||:|||||||||||||||||||||||||:||||||||||||||||| m730
VSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHGHEEHAPFDNHAADSASEE 70 80
90 100 110 120 130 140 150 160 170 180 a730.pep
KGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGARDEYTYHVNGTARSIKLNPT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m730
KGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGARDEYTYHVNGTARSIKLNPT 130
140 150 160 170 180 190 200 210 220 230 240 a730.pep
DTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFINGVAAGALNPFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m730
DTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFINGVAAGALNPFI 190
200 210 220 230 240 250 260 270 280 290 300 a730.pep
SAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKFAVIGGLGSVAGFEKNTREAVDRWI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m730
SAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKFAVIGGLGSVAGFEKNTREAVDRWI 250
260 270 280 290 300 310 320 330 340 350 360 a730.pep
QENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDFSAAYNTRTTRKVTTETEGLN
||||||||||||: || ||| :|:||||||||||||||: :| :| : ::: m730
QENPNAAETVEAVFNVAAAAKVAKLAKAAKPGKAAVSGDFADSY-----KKKLALSDSAR 310
320 330 340 350 370 380 390 400 410 420 a730.pep
RIRQNQKNSNIHEKNYGRDNPNHINVLSGNSIQHILYGDEAGGGHLFPGKPGKTTFPQHW :: ||
| : : :| m730
QLYQNAKYREALDIHYEDLIRRKTDGSSKFINGREIDAVTNDALIQAKRTISAIDKPKNF 360
370 380 390 400 410
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2475>:
TABLE-US-02919 g731.seq 1 gattttcgag cgttttcatG CGAGAACGGT
TTGTCTGTGC GCGTCCGCAA 51 TTTGGACGGC GGCAAAATCG CGTTGCGGCT
GGACGGCAGG CGTGCCGTCC 101 TCTCTTCCGA CGTTGCCGCA TCCGGCGAAC
GCTATACCGC CGAACACGGT 151 TTGTTCGGAA ACGGAACCGA GTGGCACCAG
AAAGGCGGCG AAGCCTTTTT 201 CGGCTTTACC GATGCCTACG GCAATTCGGT
CGAAACTTCC TGCCGCGCCC 251 GTTAA
This corresponds to the amino acid sequence <SEQ ID 2476; ORF
731.ng>:
TABLE-US-02920 g731.pep 1 DFRAFSCENG LSVRVRNLDG GKIALRLDGR
RAVLSSDVAA SGERYTAEHG 51 LFGNGTEWHQ KGGEAFFGFT DAYGNSVETS CRAR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2477>:
TABLE-US-02921 m731.seq 1 ATGAATATCA GGTTTTTCGC GCTGACCGTA
CCGGTTTTGT CTTTGGCGGC 51 CTGTGCCGTG CCGGAGGCGT ATGATGACGG
CGGACGCGGG CATATGCCGC 101 CCGTTCAAAA CCAAGCCGGC ACGGACGATT
TTCGGGCGTT TTCCTGCGAG 151 AACGGTTTGT CTGTGCGCGT CCGCCATTTG
GACAGCGGCA AAGTCGCGTT 201 GCGGCTGGAC GGCAGGCGTG CCGTCCTCTC
TTCCGACGTT GCCGCATCCG 251 GCGAACGCTA TACCGCCGAA CACGGTTTGT
TCGGAAACGC AACCGAGTGG 301 CACCAGAAAG GCGGCGAAGC CTTTTTCGGC
TTTACCGATG CCTACGGCAA 351 TTCGGTCGAA ACTTCCTGCC GCGCCCGTTA A
This corresponds to the amino acid sequence <SEQ ID 2478; ORF
731>:
TABLE-US-02922 m731.pep 1 MNIRFFALTV PVLSLAACAV PEAYDDGGRG
HMPPVQNQAG TDDFRAFSCE 51 NGLSVRVRHL DSGKVALRLD GRRAVLSSDV
AASGERYTAE HGLFGNATEW 101 HQKGGEAFFG FTDAYGNSVE TSCRAR* g731/m731
95.2% identity in 84 aa overlap 10 20 30 g731.pep
DFRAFSCENGLSVRVRNLDGGKIALRLDGR ||||||||||||||||:||:||:||||||| m731
LSLAACAVPEAYDDGGRGHMPPVQNQAGTDDFRAFSCENGLSVRVRHLDSGKVALRLDGR 20 30
40 50 60 70 40 50 60 70 80 g731.pep
RAVLSSDVAASGERYTAEHGLFGNGTEWHQKGGEAFFGFTDAYGNSVETSCRARX
||||||||||||||||||||||||:|||||||||||||||||||||||||||||| m731
RAVLSSDVAASGERYTAEHGLFGNATEWHQKGGEAFFGFTDAYGNSVETSCRARX 80 90 100
110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2479>:
TABLE-US-02923 a731.seq 1 ATGAATATCA GGTTTTTCGC GCTGACCGTA
CCGGTTTTGT CTTTGGCGGC 51 CTGTGCCGTG CCGGAGGCGT ATGATGACGG
CGGACGAGGG CATATGCCGC 101 CCGTTCAAAA CCAAGCCGGC ACGGCAGATT
TTCGGGCATT TTCCTGCGAG 151 AACGGTTTGT CTGTGCACGT CCGCCGTTTG
GACGGCGGCA GAATCGCGTT 201 GCGGTTGGAC GGCAGGCGTG CCGTCCTCTC
TTCCGACGTT GCCGCATCCG 251 GCGAACGCTA TACCGCCGAA CACGGTTTGT
TCGGAAACGG AACCGAGTGG 301 CATCAGAAAG GCGGCGAAGC CTTTTTCGGC
TTTACCGATG CCTACGGCAA 351 TTCGGTCGAA ACCTCCTGCC GCGAACGCTA A
This corresponds to the amino acid sequence <SEQ ID 2480; ORF
731.a>:
TABLE-US-02924 a731.pep 1 MNIRFFALTV PVLSLAACAV PEAYDDGGRG
HMPPVQNQAG TADFRAFSCE 51 NGLSVHVRRL DGGRIALRLD GRRAVLSSDV
AASGERYTAE HGLFGNGTEW 101 HQKGGEAFFG FTDAYGNSVE TSCRAR* a731/m731
94.4% identity in 126 aa overlap 10 20 30 40 50 60 a731.pep
MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTADFRAFSCENGLSVHVRRL
||||||||||||||||||||||||||||||||||||||||| |||||||||||||:||:| m731
MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTDDFRAFSCENGLSVRVRHL 10 20
30 40 50 60 70 80 90 100 110 120 a731.pep
DGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQKGGEAFFGFTDAYGNSVE
|:|::|||||||||||||||||||||||||||||||:||||||||||||||||||||||| m731
DSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQKGGEAFFGFTDAYGNSVE 70 80
90 100 110 120 a731.pep TSCRARX ||||||| m731 TSCRARX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2481>:
TABLE-US-02925 g732.seq 1 ATGTCGAAAC CTGTTTTTAA GAAAATCGCA
CTTTATACTT TGGGTGCAAT 51 CAGCGGCGTG GCCGTAAGTC TGGCGGTGCA
GGGTTTTGCC GCCGagaagg 101 ACGGgcgGGA TAACGAagtC CTGCCGGTGC
AATCCATCCG TACGATGGCG 151 GAGGTTTACG GTCAGATTAA GGCAAACTAC
TATCATGACA AACCCGATGC 201 CGATTTGTTT GAAGGTGCGA TGAAGGGTAT
GGTGGCCGGT TTGGATCCGC 251 ATTCCGAATA TATGGATAAA AAAGGTTATG
CCGAGATAAA GGAGTCCACC 301 AGCGGCGAAT TTGGCGGCTT GGGGATGGAA
ATCGGGCAGG AAGACGGTTT 351 TGTCAAAGTG GTTTCGCCGA TTGAGGACAC
GCCTGCCGAA CGGGCGGAGG 401 TGAAAAGCGG CGATTTCATT GTGAAAATCG
ATAATGTTTC GACGCGCGGT 451 ATGACGGTCA GCGAAGCGGT GAAAAAAATG
CGGGGCAAGC CGGGTACGAA 501 GATTACTTTG ACGTTGTCGC GCAAAAATGC
CGACAAGCCG ATAGTCGTCA 551 ACCTGACCCG TGCCATTATT AAAGTGAAAA
GCGTCCGCCA TCACCTGATC 601 GAACCCGATT ACGGCTATAT CCGCGTGTCG
CAGTTCCAAG AGCGGACGGT 651 CGAAAGCGTC AATACCGCCG CAAAAGAGCT
GGTAAAGGAA AATAAAGGAA 701 AACCGCTCAA GGGGCTGGTG TTGGATTTGC
GCGACGACCC CGGCGGGCTT 751 TTGACCGGCG CGGTCGGCGT GTCGGCGGCG
TTTCTGCCGT CTGAAGCGGT 801 CGTCGTCAGC ACCAAGGGAC GCGACGGCAA
AGACGGCATG GTACTGAAAG 851 CCGTTCCCGA GGATTATGTG TACGGTATGG
GCGGCGACCC TTTGGCGGGT 901 ATTCCTGCCG AGTTGAAAAC GATTCCGATG
ACGgtaTTGG TcaaTTCCGG 951 TTCggcttCC GCGTCGGAGA TTGtcgCCGG
CGCATTGCAG GACCACAAAC 1001 GCGCGGTCAT CGTCGGTACG CAGAGCTTCG
GTAAAGGTTC GGTTCAGACT 1051 TTGATTCCTT TGTCCAACGG CAGCGCGGTC
AAGTTGACGA CCGCCCTGTA 1101 TTACACGCCG AACGACCGTT CCATTCAGGC
ACAGGGGATT GTTCCCGATG 1151 TCgaaGTAAA AGATAAGGAA CGTACTTTTG
AAAGCCGCGA GGCGGACCTG 1201 GTCGGACACA TCGGCAATCC CTTgggcGGC
GAGGATGTGA ACAGTGAAAC 1251 CCttgcCGTA CCGCTTGAAA AAGATGCGGA
TAAGCCCGCT GCAAAAGAAA 1301 AAGGTAAAAA GAAAAAGGAC GAGGATTTGT
CTTCAAGGCG GATTCCGAAC 1351 CCTGCGAAAG ACGATCAGTT GCGTAAGGCT
TTGGATTTGG TCAAGTCGCC 1401 CGAGCAGTGG CAGAAGTCTT TGGGGCTGGC
GGCGAAAAAA CCGGTTTCAA 1451 ATAAAGATAA AAAAGATAAG AAGTAG
This corresponds to the amino acid sequence <SEQ ID 2482; ORF
732>:
TABLE-US-02926 g732.pep 1 MSKPVFKKIA LYTLGAISGV AVSLAVQGFA
AEKDGRDNEV LPVQSIRTMA 51 EVYGQIKANY YHDKPDADLF EGAMKGMVAG
LDPHSEYMDK KGYAEIKEST 101 SGEFGGLGME IGQEDGFVKV VSPIEDTPAE
RAEVKSGDFI VKIDNVSTRG 151 MTVSEAVKKM RGKPGTKITL TLSRKNADKP
IVVNLTRAII KVKSVRHHLI 201 EPDYGYIRVS QFQERTVESV NTAAKELVKE
NKGKPLKGLV LDLRDDPGGL 251 LTGAVGVSAA FLPSEAVVVS TKGRDGKDGM
VLKAVPEDYV YGMGGDPLAG 301 IPAELKTIPM TVLVNSGSAS ASEIVAGALQ
DHKRAVIVGT QSFGKGSVQT 351 LIPLSNGSAV KLTTALYYTP NDRSIQAQGI
VPDVEVKDKE RTFESREADL 401 VGHIGNPLGG EDVNSETLAV PLEKDADKPA
AKEKGKKKKD EDLSSRRIPN 451 PAKDDQLRKA LDLVKSPEQW QKSLGLAAKK
PVSNKDKKDK K*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2483>:
TABLE-US-02927 m732.seq 1 ATGTCGAAAC CTGTTTTTAA GAAAATCGCA
CTTTATACTT TGGGTGCAAT 51 CAGCGGCGTG GCCGTCAGTC TGGCGGTGCA
GGGTTTTGCC GCCGAGAAGG 101 ACAGGCGGGA TAACGAAGTC CTGCCGGTGC
AATCCATCCG CACAATGGCG 151 GAGGTTTACG GTCAAATCAA GGCAAACTAC
TATCAGGACA AACCCGATGC 201 CGATTTGTTT GAAGGTGCGA TGAAGGGTAT
GGTGGCCGGT TTGGATCCGC 251 ATTCCGAATA TATGGATAAA AAAGGTTATG
CCGAGATAAA GGAGTCCACC 301 AGCGGCGAAT TTGGCGGCTT GGGGATGGAA
ATCGGGCAGG AAGACGGATT 351 TGTCAAAGTG GTTTCGCCGA TTGAGGACAC
GCCTGCGGAA CGGGCGGGGG 401 TGAAAAGCGG CGATTTCATT GTGAAAATCG
ATAATGTTTC GACACGCGGC 451 ATGACGGTCA GCGAAGCGGT GAAGAAAATG
CGGGGCAAGC CGGGTACGAA 501 GATTACTTTG ACGCTGTCGC GCAAAAATGC
CGACAAGCCG ATAGTCGTCA 551 ACCTGACCCG TGCCATTATT AAAGTGAAAA
GCGTCCGCCA TCACCTGATC 601 GAACCCGATT ACGGCTATAT CCGCGTGTCG
CAGTTCCAAG AGCGGACGGT 651 CGAAAGCGTC AATACCGCCG CAAAAGAGCT
GGTAAAGGAA AATAAAGGAA 701 AACCGCTCAA GGGGCTGGTG TTGGATTTGC
GCGACGACCC CGGCGGGCTT 751 TTGACTGGCG CGGTCGGCGT GTCGGCGGCA
TTTCTGCCGT CTGAAGCAGT 801 CGTCGTCAGC ACCAAGGGAC GCGACGGCAA
AGACCGCATG GTACTGAAAG 851 CCATTCCTGA AGATTATGTG TACGGGATGG
GCGGCGATTC GTTGGCGGGC 901 ATTCCTGCCG AGTTGAAAAC CATACCGATG
ACGGTATTGG TCAATTCCGG 951 TTCGGCTTCC GCGTCGGAGA TTGTCGCAGG
TGCATTGCAG GATCATAAAC 1001 GCGCGGTCAT CGTCGGTACG CAGAGCTTCG
GCAAAGGTTC GGTTCAGACT 1051 TTGATTCCTT TGTCCAACGG CAGCGCGGTC
AAGCTGACAA CGGCACTGTA 1101 TTATACGCCG AACGACCGTT CTATTCAGGC
GCAGGGGATT GTTCCCGATG 1151 TCGAAGTAAA AGATAAGGAA CGCATTTTTG
AAAGCCGCGA GGCGGATTTG 1201 GTCGGACACA TCGGCAATCC CTTGGGCGGC
GAGGATGTGA ACGGTGAAAC 1251 CCTTGCCGTG CCGCTTGAAA AAGATGCGGA
TAAGCCCGCT GTAAAAGAAA 1301 AAGGTAAAAA GAAAAAGGAC GAGGATTTGT
CTTCAAGGCG GATTCCCAAC 1351 CCTGCCAAAG ACGACCAGTT GCGGAAAGCT
TTGGATTTAG TCAAGTCGCC 1401 CGAGCAGTGG CAGAAGTCTT TGGGGCTGGC
GGCGAAAAAG CCGGTTTCAA 1451 ATAAAGATAA GAAAGATAAA AAAGATAAGA
AGTAG
This corresponds to the amino acid sequence <SEQ ID 2484; ORF
732>:
TABLE-US-02928 m732.pep 1 MSKPVFKKIA LYTLGAISGV AVSLAVQGFA
AEKDRRDNEV LPVQSIRTMA 51 EVYGQIKANY YQDKPDADLF EGAMKGMVAG
LDPHSEYMDK KGYAEIKEST 101 SGEFGGLGME IGQEDGFVKV VSPIEDTPAE
RAGVKSGDFI VKIDNVSTRG 151 MTVSEAVKKM RGKPGTKITL TLSRKNADKP
IVVNLTRAII KVKSVRHHLI 201 EPDYGYIRVS QFQERTVESV NTAAKELVKE
NKGKPLKGLV LDLRDDPGGL 251 LTGAVGVSAA FLPSEAVVVS TKGRDGKDRM
VLKAIPEDYV YGMGGDSLAG 301 IPAELKTIPM TVLVNSGSAS ASEIVAGALQ
DHKRAVIVGT QSFGKGSVQT 351 LIPLSNGSAV KLTTALYYTP NDRSIQAQGI
VPDVEVKDKE RIFESREADL 401 VGHIGNPLGG EDVNGETLAV PLEKDADKPA
VKEKGKKKKD EDLSSRRIPN 451 PAKDDQLRKA LDLVKSPEQW QKSLGLAAKK
PVSNKDKKDK KDKK*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 732 shows 98.2% identity over a 491 aa overlap with a
predicted ORF (ORF732.a) from N. gonorrhoeae:
TABLE-US-02929 m732/g732 98.2% identity in 491 aa overlap 10 20 30
40 50 60 m732.pep
MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQSIRTMAEVYGQIKANY
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| g732
MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDGRDNEVLPVQSIRTMAEVYGQIKANY 10 20
30 40 50 60 70 80 90 100 110 120 m732.pep
YQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSGEFGGLGMEIGQEDGFVKV
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g732
YHDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSGEFGGLGMEIGQEDGFVKV 70 80
90 100 110 120 130 140 150 160 170 180 m732.pep
VSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKMRGKPGTKITLTLSRKNADKP
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| g732
VSPIEDTPAERAEVKSGDFIVKIDNVSTRGMTVSEAVKKMRGKPGTKITLTLSRKNADKP 130
140 150 160 170 180 190 200 210 220 230 240 m732.pep
IVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVESVNTAAKELVKENKGKPLKGLV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g732
IVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVESVNTAAKELVKENKGKPLKGLV 190
200 210 220 230 240 250 260 270 280 290 300 m732.pep
LDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDGKDRMVLKAIPEDYVYGMGGDSLAG
|||||||||||||||||||||||||||||||||||||| |||||:||||||||||| ||| g732
LDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDGKDGMVLKAVPEDYVYGMGGDPLAG 250
260 270 280 290 300 310 320 330 340 350 360 m732.pep
IPAELKTIPMTVLVNSGSASASEIVAGALQDHKRAVIVGTQSFGKGSVQTLIPLSNGSAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g732
IPAELKTIPMTVLVNSGSASASEIVAGALQDHKRAVIVGTQSFGKGSVQTLIPLSNGSAV 310
320 330 340 350 360 370 380 390 400 410 420 m732.pep
KLTTALYYTPNDRSIQAQGIVPDVEVKDKERIFESREADLVGHIGNPLGGEDVNGETLAV
||||||||||||||||||||||||||||||| ||||||||||||||||||||||:||||| g732
KLTTALYYTPNDRSIQAQGIVPDVEVKDKERTFESREADLVGHIGNPLGGEDVNSETLAV 370
380 390 400 410 420 430 440 450 460 470 480 m732.pep
PLEKDADKPAVKEKGKKKKDEDLSSRRIPNPAKDDQLRKALDLVKSPEQWQKSLGLAAKK
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| g732
PLEKDADKPAAKEKGKKKKDEDLSSRRIPNPAKDDQLRKALDLVKSPEQWQKSLGLAAKK 430
440 450 460 470 480 490 m732.pep PVSNKDKKDKKDKKX ||||||||||| g732
PVSNKDKKDKKX 490
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2485>:
TABLE-US-02930 a732.seq 1 ATGTCGAAAC CTGTTTTTAA GAAAATCGCA
CTTTATACTT TGGGTGCAAT 51 CAGCGGCGTG GCCGTCAGTC TGGCGGTGCA
GGGTTTTGCC GCCGAGAAGG 101 ACAGGCGGGA TAACGAAGTC CTGCCGGTGC
AATCCATCCG CACAATGGCG 151 GAGGTTTACG GTCAAATCAA GGCAAACTAC
TATCAGGACA AACCCGATGC 201 CGATTTGTTT GAAGGTGCGA TGAAGGGTAT
GGTGGCCGGT TTGGATCCGC 251 ATTCCGAATA TATGGATAAA AAAGGTTATG
CCGAGATAAA GGAGTCCACC 301 AGCGGCGAAT TTGGCGGCTT GGGGATGGAA
ATCGGGCAGG AAGACGGATT 351 TGTCAAAGTG GTTTCGCCGA TTGAGGACAC
GCCTGCGGAA CGGGCGGGGG 401 TGAAAAGCGG CGATTTCATT GTGAAAATCG
ATAATGTTTC GACACGCGGC 451 ATGACGGTCA GCGAAGCGGT GAAGAAAATG
CGGGGCAAGC CGGGTACGAA 501 GATTACTTTG ACGCTGTCGC GCAAAAATGC
CGACAAGCCG ATAGTCGTCA 551 ACCTGACCCG TGCCATTATT AAAGTGAAAA
GCGTCCGCCA TCACCTGATC 601 GAACCCGATT ACGGCTATAT CCGCGTGTCG
CAGTTCCAAG AGCGGACGGT 651 CGAAAGCGTC AATACCGCCG CAAAAGAGCT
GGTAAAGGAA AATAAAGGAA 701 AACCGCTCAA GGGGCTGGTG TTGGATTTGC
GCGACGACCC CGGCGGGCTT 751 TTGACTGGCG CGGTCGGCGT GTCGGCGGCA
TTTCTGCCGT CTGAAGCAGT 801 CGTCGTCAGC ACCAAGGGAC GCGACGGCAA
AGACCGCATG GTACTGAAAG 851 CCGTTCCTGA AGATTATGTG TACGGGATGG
GCGGCGATTC GTTGGCGGGC 901 ATTCCTGCCG AGTTGAAAAC CATACCGATG
ACGGTATTGG TCAATTCCGG 951 TTCGGCTTCC GCGTCGGAGA TTGTCGCAGG
TGCATTGCAG GATCATAAAC 1001 GCGCGGTCAT CGTCGGTACG CAGAGCTTCG
GCAAAGGTTC GGTTCAGACT 1051 TTGATTCCTT TGTCCAACGG CAGCGCGGTC
AAGCTGACAA CGGCACTGTA 1101 TTATACGCCG AACGACCGTT CTATTCAGGC
GCAGGGGATT GTTCCCGATG 1151 TCGAAGTAAA AGATAAGGAA CGCATTTTTG
AAAGCCGCGA GGCGGATTTG 1201 GTCGGACACA TCGGCAATCC TTTGGGCGGC
GAGGATGTGA ACAGTGAAAC 1251 CCTTGCCGTG CCGCTTGAAA AAGATGCGGA
TAAGCCCGCT GTAAAAGAAA 1301 AAGGTAAAAA GAAAAAGGAC GAGGATTTGT
CTTCAAGGCG GATTCCCAAC 1351 CCTGCCAAAG ACGACCAGTT GCGGAAAGCT
TTGGATTTAG TCAAGTCGCC 1401 CGAGCAGTGG CAGAAGTCTT TGGGGCTGGC
GGCGAAAAAG CCGGTTTCAA 1451 ATAAAGATAA GAAAGATAAA AAAGATAAGA
AGTAG
This corresponds to the amino acid sequence <SEQ ID 2486; ORF
732.a>:
TABLE-US-02931 a732.pep 1 MSKPVFKKIA LYTLGAISGV AVSLAVQGFA
AEKDRRDNEV LPVQSIRTMA 51 EVYGQIKANY YQDKPDADLF EGAMKGMVAG
LDPHSEYMDK KGYAEIKEST 101 SGEFGGLGME IGQEDGFVKV VSPIEDTPAE
RAGVKSGDFI VKIDNVSTRG 151 MTVSEAVKKM RGKPGTKITL TLSRKNADKP
IVVNLTRAII KVKSVRHHLI 201 EPDYGYIRVS QFQERTVESV NTAAKELVKE
NKGKPLKGLV LDLRDDPGGL 251 LTGAVGVSAA FLPSEAVVVS TKGRDGKDRM
VLKAVPEDYV YGMGGDSLAG 301 IPAELKTIPM TVLVNSGSAS ASEIVAGALQ
DHKRAVIVGT QSFGKGSVQT 351 LIPLSNGSAV KLTTALYYTP NDRSIQAQGI
VPDVEVKDKE RIFESREADL 401 VGHIGNPLGG EDVNSETLAV PLEKDADKPA
VKEKGKKKKD EDLSSRRIPN 451 PAKDDQLRKA LDLVKSPEQW QKSLGLAAKK
PVSNKDKKDK KDKK* a732/m732 99.6% identity in 494 aa overlap 10 20
30 40 50 60 a732.pep
MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQSIRTMAEVYGQIKANY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQSIRTMAEVYGQIKANY 10 20
30 40 50 60 70 80 90 100 110 120 a732.pep
YQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSGEFGGLGMEIGQEDGFVKV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
YQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSGEFGGLGMEIGQEDGFVKV 70 80
90 100 110 120 130 140 150 160 170 180 a732.pep
VSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKMRGKPGTKITLTLSRKNADKP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
VSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKMRGKPGTKITLTLSRKNADKP 130
140 150 160 170 180 190 200 210 220 230 240 a732.pep
IVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVESVNTAAKELVKENKGKPLKGLV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
IVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVESVNTAAKELVKENKGKPLKGLV 190
200 210 220 230 240 250 260 270 280 290 300 a732.pep
LDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDGKDRMVLKAVPEDYVYGMGGDSLAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
LDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDGKDRMVLKAIPEDYVYGMGGDSLAG 250
260 270 280 290 300 310 320 330 340 350 360 a732.pep
IPAELKTIPMTVLVNSGSASASEIVAGALQDHKRAVIVGTQSFGKGSVQTLIPLSNGSAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
IPAELKTIPMTVLVNSGSASASEIVAGALQDHKRAVIVGTQSFGKGSVQTLIPLSNGSAV 310
320 330 340 350 360 370 380 390 400 410 420 a732.pep
KLTTALYYTPNDRSIQAQGIVPDVEVKDKERIFESREADLVGHIGNPLGGEDVNSETLAV
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| m732
KLTTALYYTPNDRSIQAQGIVPDVEVKDKERIFESREADLVGHIGNPLGGEDVNGETLAV 370
380 390 400 410 420 430 440 450 460 470 480 a732.pep
PLEKDADKPAVKEKGKKKKDEDLSSRRIPNPAKDDQLRKALDLVKSPEQWQKSLGLAAKK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m732
PLEKDADKPAVKEKGKKKKDEDLSSRRIPNPAKDDQLRKALDLVKSPEQWQKSLGLAAKK 430
440 450 460 470 480 490 a732.pep PVSNKDKKDKKDKKX |||||||||||||||
m732 PVSNKDKKDKKDKKX 490
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2487>:
TABLE-US-02932 g733.seq 1 ATGATGAATC CGAAAACCTT GGGCCGTTTG
TCGCTGTGTG CGGCGGTCTT 51 GGCTCTGACC GCCTGCGCCG GCGGCGGGCA
TAAAAACCTG TATTATTACG 101 GCGGTTATCC CGATACCGTC TATGAAGGTT
TGAAAAACGa cgACACTTCG 151 TTGGGCAAGC AGACCGAAAA GATGGAAAAA
TACTTTGCGG AAGCCGCCAA 201 CAAAAAAATG AATGCCGCCC CGGGTGCGCA
CGCCCATTTG GGACTGCTGC 251 TTTCCCGTTC GGGAGACAAA GAGGGCGCGT
TCCGCCAATT TGAAGAAGAG 301 AAAAGGCTGT TTCCCGAATC GGGCGTATTT
ATGGACTTCC TGATGAAAAC 351 CGGtaaAGGA GGCAAGCGAT GA
This corresponds to the amino acid sequence <SEQ ID 2488; ORF
733>:
TABLE-US-02933 g733.pep 1 MMNPKTLGRL SLCAAVLALT ACAGGGHKNL
YYYGGYPDTV YEGLKNDDTS 51 LGKQTEKMEK YFAEAANKKM NAAPGAHAHL
GLLLSRSGDK EGAFRQFEEE 101 KRLFPESGVF MDFLMKTGKG GKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2489>:
TABLE-US-02934 m733.seq 1 ATGATGAATC CGAAAACCTT GAGCCGTTTG
TCGCTGTGTG CGGCGGTCTT 51 GGCTCTGACC GCCTGCGGCG GCAACGGGCA
AAAATCCCTG TATTATTACG 101 GCGGCTATCC CGATACCGTC TATGAAGGTT
TGAAAAACGA CGACACTTCG 151 TTGGGCAAGC AGACCGAAAA GATGGAAAAA
TACTTTGTGG AAGCCGGCAA 201 CAAAAAAATG AATGCCGCCC CGGGTGCGCA
CGCCCATCTG GGACTGCTGC 251 TTTCCCGTTC GGGAGACAAA GAGGGCGCGT
TCCGCCAGTT TGAAGAAGAG 301 AAAAGGCTGT TTCCCGAATC GGGCGTATTT
ATGGACTTCC TGATGAAAAC 351 CGGTAAAGGA GGCAAGCGAT GA
This corresponds to the amino acid sequence <SEQ ID 2490; ORF
733>:
TABLE-US-02935 m733.pep 1 MMNPKTLSRL SLCAAVLALT ACGGNGQKSL
YYYGGYPDTV YEGLKNDDTS 51 LGKQTEKMEK YFVEAGNKKM NAAPGAHAHL
GLLLSRSGDK EGAFRQFEEE 101 KRLFPESGVF MDFLMKTGKG GKR*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 733 shows 94.3% identity over a 123 aa overlap with a
predicted ORF (ORF733.a) from N. gonorrhoeae:
TABLE-US-02936 m733/g733 10 20 30 40 50 60 m733.pep
MMNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLKNDDTSLGKQTEKMEK
|||||||:||||||||||||||:|:|:|:||||||||||||||||||||||||||||||| g733
MMNPKTLGRLSLCAAVLALTACAGGGHKNLYYYGGYPDTVYEGLKNDDTSLGKQTEKMEK 10 20
30 40 50 60 70 80 90 100 110 120 m733.pep
YFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRLFPESGVFMDFLMKTGKG
||:||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| g733
YFAEAANKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRLFPESGVFMDFLMKTGKG 70 80
90 100 110 120 m733.pep GKRX |||| g733 GKRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2491>:
TABLE-US-02937 a733.seq 1 ATGATGAATC CGAAAACCTT GAGCCGTTTG
TCGCTGTGTG CGGCGGTCTT 51 GGCTCTGACC GCCTGCGGCG GCAACGGGCA
AAAATCCCTG TATTATTACG 101 GCGGCTATCC CGATACCGTC TATGAAGGTT
TGAAAAACGA CGACACTTCG 151 TTGGGCAAGC AGACCGAAAA GATGGAAAAA
TACTTTGTGG AAGCCGGCAA 201 CAAAAAAATG AATGCCGCCC CGGGTGCGCA
CGCCCATCTG GGACTGCTGC 251 TTTCCCGTTC GGGAGACAAA GAGGGCGCGT
TCCGCCAGTT TGAAGAAGAG 301 AAAAGGCTGT TTCCCGAATC GGGCGTATTT
ATGGACTTCC TGATGAAAAC 351 CGGTAAAGGA GGCAAGCGAT GA
This corresponds to the amino acid sequence <SEQ ID 2492; ORF
733.a>:
TABLE-US-02938 a733.pep 1 MMNPKTLSRL SLCAAVLALT ACGGNGQKSL
YYYGGYPDTV YEGLKNDDTS 51 LGKQTEKMEK YFVEAGNKKM NAAPGAHAHL
GLLLSRSGDK EGAFRQFEEE 101 KRLFPESGVF MDFLMKTGKG GKR* a733/m733
100.0% identity in 123 aa overlap 10 20 30 40 50 60 a733.pep
MMNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLKNDDTSLGKQTEKMEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m733
MMNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLKNDDTSLGKQTEKMEK 10 20
30 40 50 60 70 80 90 100 110 120 a733.pep
YFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRLFPESGVFMDFLMKTGKG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m733
YFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRLFPESGVFMDFLMKTGKG 70 80
90 100 110 120 a733.pep GKRX |||| m733 GKRX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2493>:
TABLE-US-02939 g734.seq 1 ATGATGAAAA AGATACTGGC AGTATCGGCA
CTATGCCTGA TGACTGCGGC 51 GGCACAGGCT GCCGATACTT ACGGCTATCT
CGCCGTTTGG CAGAATCCGC 101 AGGATGCAAA CGATGTTTTG CAGGTTAAAA
CCACAAAAGA AGATTCGGCG 151 AAAAGCGAAG CGTTTGCCGA GTTGGAAGCC
TTTTGCAAAG GTCAGGACAC 201 GCTTGCGGGC ATTGCCGAAG ACGAGCCGAC
CGGATGCCGG TCGGTCGTGT 251 CGCTGAACAA TACCTGTGTC TCGCTGGCAT
ACCCGAAAGC CTTGGGCGCG 301 ATGCGCGTTG AAAACGCCGT CGTGATTACT
TCTCCGCGTT TTACGAGCGT 351 TCATCAGGTC GCACTCAACC AGTGCATAAA
AAAATACGGC GCACAGGGAC 401 AATGCGGCTT GGAAACAGTG TATTGCACGT
CATCTTCTTA TTACGGCGGG 451 GCTGTTCGCT CCTTAATCCA ACACCTGAAA TAA
This corresponds to the amino acid sequence <SEQ ID 2494; ORF
734.ng>:
TABLE-US-02940 g734.pep 1 MMKKILAVSA LCLMTAAAQA ADTYGYLAVW
QNPQDANDVL QVKTTKEDSA 51 KSEAFAELEA FCKGQDTLAG IAEDEPTGCR
SVVSLNNTCV SLAYPKALGA 101 MRVENAVVIT SPRFTSVHQV ALNQCIKKYG
AQGQCGLETV YCTSSSYYGG 151 AVRSLIQHLK *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2495>:
TABLE-US-02941 m734.seq (partial) 1 TCGGGCATTG CTGAAGACGA
GCCGACCGGA TGCCGGTCGG TCGTGTCGCT 51 GAACAATACC TGTGTCGCGC
TGGCATACCC GAAAGCCTTG GGCGCGCTGC 101 GTGTCGACAA CGCCGTCGTG
ATTACTTCTC CGCGTTTTAC GAGCGTTCAT 151 CAGGTCGCAC TCAACCAGTG
CATCAAAAAA TACGGCGTAC AGGGACAATG 201 CGGCTTGGAA ACAGTGTATT
GCACATCTTC TTCTTATTAC GGCGGAACTG 251 TGCGCTCTTT GATTCAAAAT
CTCAAATAA
This corresponds to the amino acid sequence <SEQ ID 2496; ORF
734>:
TABLE-US-02942 m734.pep (partial) 1 SGIAEDEPTG CRSVVSLNNT
CVALAYPKAL GALRVDNAVV ITSPRFTSVH 51 QVALNQCIKK YGVQGQCGLE
TVYCTSSSYY GGTVRSLIQN LK* m734/g734 92.4% identity in 92 aa overlap
10 20 30 m734.pep SGIAEDEPTGCRSVVSLNNTCVALAYPKAL
:|||||||||||||||||||||:||||||| g734
VLQVKTTKEDSAKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVSLAYPKAL 40 50
60 70 80 90 40 50 60 70 80 90 m734.pep
GALRVDNAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQN
||:||:||||||||||||||||||||||||||:|||||||||||||||||||:||||||: g734
GAMRVENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGAVRSLIQH 100
110 120 130 140 150 m734.pep LKX ||| g734 LKX 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2497>:
TABLE-US-02943 a734.seq 1 ATGATGAAAA AGATACTGGC CGTATCGGCA
CTATGCCTGA TGACTGCGGC 51 GGCACGGGCT GCCGATACTT ACGGCTATCT
CGCCGTTTGG CAGAATCCGC 101 AGAATGCAAA CGATGTTTTG CAGGTTAAAA
CCACAAAAGA AGATTCGACG 151 AAAAGCGAAG CGTTTGCCGA GTTGGAAGCT
TTCTGCAAAG GTCAGGACAC 201 GCTTGCGGGC ATTGCCGAAG ACGAGCCGAC
CGGATGCCGG TCGGTCGTGT 251 CGCTGAACAA TACCTGTGTC GCGCTGGCAT
ACCCGAAAGC CTTGGGCGCG 301 ATGCGCGTTG AAAACGCCGT TGTGATTACT
TCTCCGCGTT TTACGAGCGT 351 TTATCAGGTC GCACTCAACC AGTGCATCAA
AAAATACGGC GCACAGGGAC 401 AATGCGGCTT GGAAACAGTG TATTGCACGT
CTTCTTCTTA TTACGGGGGA 451 ACTGTGCGCT CTTTGATTCA AAATCTCAAA TAA
This corresponds to the amino acid sequence <SEQ ID 2498; ORF
734.a>:
TABLE-US-02944 a734.pep 1 MMKKILAVSA LCLMTAAARA ADTYGYLAVW
QNPQNANDVL QVKTTKEDST 51 KSEAFAELEA FCKGQDTLAG IAEDEPTGCR
SVVSLNNTCV ALAYPKALGA 101 MRVENAVVIT SPRFTSVYQV ALNQCIKKYG
AQGQCGLETV YCTSSSYYGG 151 TVRSLIQNLK * a734/g734 95.6% identity in
160 aa overlap 10 20 30 40 50 60 a734.pep
MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNANDVLQVKTTKEDSTKSEAFAELEA
||||||||||||||||||:|||||||||||||||:||||||||||||||:|||||||||| g734
MMKKILAVSALCLMTAAAQAADTYGYLAVWQNPQDANDVLQVKTTKEDSAKSEAFAELEA 10 20
30 40 50 60 70 80 90 100 110 120 a734.pep
FCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMRVENAVVITSPRFTSVYQV
||||||||||||||||||||||||||||||:||||||||||||||||||||||||||:|| g734
FCKGQDTLAGIAEDEPTGCRSVVSLNNTCVSLAYPKALGAMRVENAVVITSPRFTSVHQV 70 80
90 100 110 120 130 140 150 160 a734.pep
ALNQCIKKYGAQGQCGLETVYCTSSSYYGGTVRSLIQNLKX
||||||||||||||||||||||||||||||:||||||:||| g734
ALNQCIKKYGAQGQCGLETVYCTSSSYYGGAVRSLIQHLKX 130 140 150 160
[0373] g735.seq not found yet
[0374] g735.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2499>:
TABLE-US-02945 m735.seq 1 ATGAATCTCG TGAAACTGCT GGCGAATAAC
TGGCAACCGA TTGCCATTAT 51 CGCGCTTGTC GGCACGGGCT TGGCTGTGTC
GCACCATCAA GGCTACAAGT 101 CGGCATTTGC GAAGCAGCAG GCGGTCATCG
ACAAGATGGA GCGCGACAAG 151 GCGCAAGCCC TGCTGTTGTC GGCTCAAAAC
TATGCGCGCG AACTGGAACT 201 GGCACGCGCG GAAGCTAAAA AATATGAAGT
CAAGGCGCAC GCTGTCGGCA 251 TGGCTTTGGC GAAAAAACAG GCGGAAGTCA
GCCGTCTGAA AACGGAAAAT 301 AAAAAGGAAA TCGAAAATGT CCTTACTCAA
GACCGTAAAA ATGCAAGCGG 351 CGGTTGCATT GACGGCTTTG GCTCTCACGG
CCTGCAGCTC TACAACCGCG 401 CCCTCGGCTA CGGAAATTAA
This corresponds to the amino acid sequence <SEQ ID 2500; ORF
735>:
TABLE-US-02946 m735.pep 1 MNLVKLLANN WQPIAIIALV GTGLAVSHHQ
GYKSAFAKQQ AVIDKMERDK 51 AQALLLSAQN YARELELARA EAKKYEVKAH
AVGMALAKKQ AEVSRLKTEN 101 KKEIENVLTQ DRKNASGGCI DGFGSHGLQL
YNRALGYGN*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2501>:
TABLE-US-02947 a735.seq 1 ATGAATCTCG TGAAACTGCT GGCGAATAAC
TGGCAACCGA TTGCCATCAT 51 CGCGCTTGTC GGCACGGGTT TGGCGGTGTC
GCACCATCAA GGCTACAAGT 101 CGGCTTTTGC GAAGCAGCAG GCGGTCATTG
AGAAAATGAA GCGCGACAAG 151 GCGCAAGCCC TGCTGTTGTC GGCTCAAAAC
TACGCCCGCG AACTGGAACA 201 GGCGCGTGCG GAAGCTAAAA AATATGAAGT
CAAGGCGCAC GCCGTCGGCA 251 TGGCTTTGGC GAAAAAACAG GCGGAAGTCA
GCCGTCTGAA AACGGAAAAT 301 AAAAAGGAAA TCGAAAATGT CCTTACTCAA
GACCGTAAAA ATGCAGGCGG 351 CGGTTGTATT GACGGCTTTG GCCATCACGG
CTTGCAGCTC TACAAGCGCG 401 CCCTCGGCTA CGGAAATTAA
This corresponds to the amino acid sequence <SEQ ID 2502; ORF
735.a>:
TABLE-US-02948 a735.pep 1 MNLVKLLANN WQPIAIIALV GTGLAVSHHQ
GYKSAFAKQQ AVIEKMKRDK 51 AQALLLSAQN YARELEQARA EAKKYEVKAH
AVGMALAKKQ AEVSRLKTEN 101 KKEIENVLTQ DRKNAGGGCI DGFGHHGLQL
YKRALGYGN* a735/m735 95.7% identity in 139 aa overlap 10 20 30 40
50 60 a735.pep
MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQAVIEKMKRDKAQALLLSAQN
|||||||||||||||||||||||||||||||||||||||||||:||:||||||||||||| m735
MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQAVIDKMERDKAQALLLSAQN 10 20
30 40 50 60 70 80 90 100 110 120 a735.pep
YARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKKEIENVLTQDRKNAGGGCI ||||||
||||||||||||||||||||||||||||||||||||||||||||||||:|||| m735
YARELELARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKKEIENVLTQDRKNASGGCI 70 80
90 100 110 120 130 140 a735.pep DGFGHHGLQLYKRALGYGNX ||||
||||||:|||||||| m735 DGFGSHGLQLYNRALGYGNX 130 140
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2503>:
TABLE-US-02949 g736.seq 1 ATGAATTTTA TCCGTTCCGT CGGGGCGAAA
ACCCTCGGCC TTATTCAATC 51 CTTCGGCAGT ATCACGCTGT TTCTGCTGAA
CATTTTGGCG AAATCCGGCA 101 CGGCTTTCGC CCGTCCGCGC CTGAGCGTGC
GCCAAGTGTA TTTTGCCGGC 151 GTGCTGTCGG TGCTGATTGT TGCCGTTTCG
GGGCTGTTCG TCGGTATGGT 201 TTTGGGTTTG CAGGGCTATA CGCAGTTGTC
GAAATTCAAA TCCGCCGATA 251 TTTTGGGCTA TATGGTCGCG GCTTCTCTGT
TGCGCGAACT GGGTCCCGTG 301 TTGGCGGCGA TTCTGTTTGC CAGCAGCGCG
GGCGGTGCGA TGACCAGCGA 351 AATCGGTTTG ATGAAAACGA CCGGACAGCT
CGAAGCGATG AACGTGATGG 401 CGGTCAACCC CGTCGCCCGC GTGGTTGCCC
CGCGTTTTTG GGCGGGCGTG 451 TTTTCTATGC CGCTTTTGGC TTCGATTTTC
AACGTCGCGG GCATTTTCGG 501 CGCGTATTTG GTCGGCGTGA GCTGGCTGGG
TTTGGACAGC GGTATTTTCT 551 GGCCGCAGAT GCAGAACAAC ATTACGATAC
ATTACGATGT AATCAACGGT 601 TTGATCAAAT CCGCCGCGTT CGGCGTGGCG
GTAACGCTGA TTGCCGTGCA 651 TCAGGGCTTC CACTGCATCC CGACTTCGGA
AGGCATTTTG CGCGCCAGCA 701 CGCGCACGGT GGTTTCGTCC GCCCTGACGA
TTTTGGCGGT CGATTTTATA 751 TTGACCGCGT GGATGTTTAC AGATTGA
This corresponds to the amino acid sequence <SEQ ID 2504; ORF
736>:
TABLE-US-02950 g736.pep 1 MNFIRSVGAK TLGLIQSFGS ITLFLLNILA
KSGTAFARPR LSVRQVYFAG 51 VLSVLIVAVS GLFVGMVLGL QGYTQLSKFK
SADILGYMVA ASLLRELGPV 101 LAAILFASSA GGAMTSEIGL MKTTGQLEAM
NVMAVNPVAR VVAPRFWAGV 151 FSMPLLASIF NVAGIFGAYL VGVSWLGLDS
GIFWPQMQNN ITIHYDVING 201 LIKSAAFGVA VTLIAVHQGF HCIPTSEGIL
RASTRTVVSS ALTILAVDFI 251 LTAWMFTD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2505>:
TABLE-US-02951 m736.seq 1 ATGAATTTTA TCCGTTCCGT CGGGGCGAAA
ACCCTCGGCC TTATTCAATC 51 CTTCGGCAGT ATCACGCTGT TTCTGCTGAA
CATTTTGGCG AAATCCGGCA 101 CGGCTTTCGC CCGTCCGCGC CTGAGCGTGC
GCCAAGTGTA TTTTGCCGGC 151 GTGCTGTCGG TGCTGATTGT TGCCGTTTCG
GGGCTGTTCG TCGGTATGGT 201 TTTGGGTTTG CAGGGCTATA CGCAGTTGTC
GAAATTCAAA TCCGCCGATA 251 TTTTGGGCTA TATGGTCGCG GCTTCTCTGT
TGCGCGAACT GGGTCCCGTG 301 TTGGCGGCGA TTCTGTTTGC CAGCAGCGCG
GGCGGTGCGA TGACCAGCGA 351 AATCGGTTTG ATGAAAACGA CCGGACAGCT
CGAAGCGATG AACGTGATGG 401 CGGTCAACCC CGTCGCCCGC GTGGTTGCCC
CGCGTTTTTG GGCGGGCGTG 451 TTTTCTATGC CGCTTTTGGC TTCGATTTTC
AACGTCGCGG GCATTTTCGG 501 CGCGTATTTG GTCGGCGTGA GCTGGCTGGG
TTTGGACAGC GGTATTTTCT 551 GGCCGCAGAT GCAGAACAAC ATTACGATAC
ATTACGATGT AATCAACGGT 601 TTGATCAAAT CCGCCGCGTT CGGCGTGGCG
GTAACGCTGA TTGCCGTGCA 651 TCAGGGCTTC CACTGCATCC CGACTTCGGA
AGGCATTTTG CGCGCCAGCA 701 CGCGCACGGT GGTTTCGTCC GCCCTGACGA
TTTTGGCGGT CGATTTTATA 751 TTGACCGCGT GGATGTTTAC AGATTGA
This corresponds to the amino acid sequence <SEQ ID 2506; ORF
736>:
TABLE-US-02952 m736.pep 1 MNFIRSVGAK TLGLIQSLGS ITLFLLNILA
KSGTAFVRPR LSVRQVYFAG 51 VLSVLIVAVS GLFVGMVLGL QGYTQLSKFK
SADILGYMVA ASLLRELGPV 101 LAAILFASSA GGAMTSEIGL MKTTEQLEAM
NVMAVNPVAR VVAPRFWAGV 151 FSMPLLASIF NVAGIFGAYL VGVTWLGLDS
GIFWSQMQNN ITIHYDVING 201 LIKSAAFGVA VTLIAVHQGF HCVPTSEGIL
RASTRTVVSS ALTILAVDFI 251 LTAWMFTD*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 736 shows 97.7% identity over a 258 aa overlap with a
predicted ORF (ORF736.ng) from N. gonorrhoeae:
TABLE-US-02953 m736/g736 10 20 30 40 50 60 m736.pep
MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVS
|||||||||||||||||:||||||||||||||||||:||||||||||||||||||||||| g736
MNFIRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARPRLSVRQVYFAGVLSVLIVAVS 10 20
30 40 50 60 70 80 90 100 110 120 m736.pep
GLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g736
GLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL 70 80
90 100 110 120 130 140 150 160 170 180 m736.pep
MKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDS ||||
||||||||||||||||||||||||||||||||||||||||||||||||:|||||| g736
MKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDS 130
140 150 160 170 180 190 200 210 220 230 240 m736.pep
GIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSS ||||
|||||||||||||||||||||||||||||||||||||:||||||||||||||||| g736
GIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRASTRTVVSS 190
200 210 220 230 240 250 259 m736.pep ALTILAVDFILTAWMFTDX
||||||||||||||||||| g736 ALTILAVDFILTAWMFTDX 250
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2507>:
TABLE-US-02954 a736.seq 1 ATGAATTTTA TCCGTTCCGT CGGGGCGAAA
ACCCTCGGCC TTATTCAATC 51 TCTCGGCAGT ATCACGCTGT TTCTGCTGAA
TATTCTGGCG AAATCCGGTA 101 CGGCTTTCGT CCGTCCGCGC CTGAGCGTGC
GCCAAGTGTA TTTTGCCGGC 151 GTGCTGTCGG TGTTGATTGT TGCCGTTTCA
GGGCTGTTTG TCGGCATGGT 201 CTTGGGTTTG CAGGGCTATA CGCAGTTGTC
GAAATTCAAA TCCGCCGATA 251 TTTTGGGCTA TATGGTCGCG GCTTCGCTGT
TGCGCGAACT GGGTCCGGTG 301 TTGGCGGCGA TTCTGTTTGC CAGCAGCGCG
GGCGGTGCGA TGACCAGCGA 351 AATCGGTTTG ATGAAAACGA CCGAACAGCT
CGAAGCGATG AACGTGATGG 401 CGGTAAACCC CGTCGCCCGA GTGGTTGCGC
CGCGCTTTTG GGCGGGCGTG 451 TTTTCCATGC CGCTTTTGGC TTCGATTTTC
AACGTGGCGG GTATTTTCGG 501 CGCGTATTTG GTCGGTGTAA CCTGGCTGGG
CTTGGACAGC GGTATTTTCT 551 GGTCGCAAAT GCAGAACAAC ATCACGATAC
ATTACGATGT AATCAACGGT 601 CTGATCAAAT CCGCCGCGTT CGGCGTGGCG
GTAACGCTGA TTGCCGTGCA 651 TCAGGGCTTC CACTGCGTCC CGACCTCGGA
AGGCATTTTG CGCGCCAGCA 701 CGCGCACGGT GGTTTCGTCC GCCCTGACGA
TTTTGGCGGT CGATTTTATA 751 TTGACCGCGT GGATGTTTAC AGATTGA
This corresponds to the amino acid sequence <SEQ ID 2508; ORF
736.a>:
TABLE-US-02955 a736.pep 1 MNFIRSVGAK TLGLIQSLGS ITLFLLNILA
KSGTAFVRPR LSVRQVYFAG 51 VLSVLIVAVS GLFVGMVLGL QGYTQLSKFK
SADILGYMVA ASLLRELGPV 101 LAAILFASSA GGAMTSEIGL MKTTEQLEAM
NVMAVNPVAR VVAPRFWAGV 151 FSMPLLASIF NVAGIFGAYL VGVTWLGLDS
GIFWSQMQNN ITIHYDVING 201 LIKSAAFGVA VTLIAVHQGF HCVPTSEGIL
RASTRTVVSS ALTILAVDFI 251 LTAWMFTD* a736/m736 100.0% identity in
258 aa overlap 10 20 30 40 50 60 a736.pep
MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m736
MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVS 10 20
30 40 50 60 70 80 90 100 110 120 a736.pep
GLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m736
GLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL 70 80
90 100 110 120 130 140 150 160 170 180 a736.pep
MKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m736
MKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDS 130
140 150 160 170 180 190 200 210 220 230 240 a736.pep
GIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m736
GIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSS 190
200 210 220 230 240 250 259 a736.pep ALTILAVDFILTAWMFTDX
||||||||||||||||||| m736 ALTILAVDFILTAWMFTDX 250
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2509>:
TABLE-US-02956 g737.seq 1 atgaACATCA AACACCTTCT CTTGACCGCC
GCCGCAACCG CACTGTTGGG 51 CATTTCCGCC CCCGCACTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACGGCAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCGGC TTGGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACG ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2510; ORF
737>:
TABLE-US-02957 g737.pep 1 MNIKHLLLTA AATALLGISA PALAHHDGHG
DDDHGHAAHQ HGKQDKIISR 51 AQAEKAAWAR VGGKITDIDL EHDDGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2511>:
TABLE-US-02958 m737.seq.. 1 ATGAACATCA AACACCTTCT CTTGACCTCC
GCCGCAACCG CACTGCTGAG 51 CATTTCCGCC CCCGCGCTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACAACAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCAGC GTTGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACA ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2512; ORF
737>:
TABLE-US-02959 m737.pep 1 MNIKHLLLTS AATALLSISA PALAHHDGHG
DDDHGHAAHQ HNKQDKIISR 51 AQAEKAALAR VGGKITDIDL EHDNGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 737 shows 95.4% identity over a 108 aa overlap with a
predicted ORF (ORF737.a) from N. gonorrhoeae:
TABLE-US-02960 m737/g737 10 20 30 40 50 60 m737.pep
MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQDKIISRAQAEKAALAR
|||||||||:||||||:||||||||||||||||||||||||:||||||||||||||| || g737
MNIKHLLLTAAATALLGISAPALAHHDGHGDDDHGHAAHQHGKQDKIISRAQAEKAAWAR 10 20
30 40 50 60 70 80 90 100 109 m737.pep
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX
|||||||||||||:||||||||||||||||||||||||||||||||||| g737
VGGKITDIDLEHDDGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2513>:
TABLE-US-02961 a737.seq 1 ATGAACTTCA AACGCCTTCT CTTGACCGCC
GCCGCAACCG CACTGATGGG 51 CATTTCCGCC CCCGCACTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACAGCAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCAGC GTTGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACA ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2514; ORF
737.a>:
TABLE-US-02962 a737.pep 1 MNFKRLLLTA AATALMGISA PALAHHDGHG
DDDHGHAAHQ HSKQDKIISR 51 AQAEKAALAR VGGKITDIDL EHDNGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD* a737/m737 94.4% identity in 108
aa overlap 10 20 30 40 50 60 a737.pep
MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQDKIISRAQAEKAALAR
||:|:||||:|||||::||||||||||||||||||||||||:|||||||||||||||||| m737
MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQDKIISRAQAEKAALAR 10 20
30 40 50 60 70 80 90 100 109 a737.pep
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX
||||||||||||||||||||||||||||||||||||||||||||||||| m737
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2515>:
TABLE-US-02963 g738.seq 1 ATGTCCGCTG AAACGACCGT ATCCGGCGCG
CGCCCCGCCG CCAAACTGCC 51 GATTTACATC CTGCCCTGCT TCCTTTGGAT
AGGCATCATC CCCTTTACCT 101 TCGCACTCAG GCTGAAACCG TCGCCCGACT
TTTACCACGA TGCCGCCGCC 151 GCGGCCGGCC TGATTGTCCT GTTGTTCCTC
ACGGCAGGAA AAAAGCTGTT 201 TGATGTCAAA ATCCCCGCCA TCAGCTTCCT
CCTGTTTGCA ATGGCGGCAT 251 TTTGGTGGCT TCAGGCACGC CTGATGAACC
TGATTTATCC CGGAATGAAC 301 GACATCGCCT CTTGGGTTTT CATCTTGCTC
GCCGTCAGCG CGTGGGCCTG 351 CAAGAGTTTG GTCGCACACT ACGGACAAGA
ACGCAtcgtT ACCCTGTTTG 401 CCTGGTCGCT GCTTATCGGC TCCCTGCTTC
AATCCTGCAT CGTcgtCATC 451 CAGTTTGCCG GCTGGGAAAA CACCCCCCTG
CTTCAAAACA TCATCGTTCA 501 CAGAGGGCAA GGCGTAATCG GACACATCGG
GCAGCGCAAC AACCTCGGAC 551 ACTACCTCAT GTGGGGCATA CTCGCCTCCG
CCTACCTCAA CGGACAACGA 601 AAAATCCCCG CAGCCCTCGG CGCAATCTGC
CTGATTATGC AGACCGCCGT 651 TTTAGGTTTG GTCAATTCGC GCACCATCTT
GACCTACATA GCCGCCATCG 701 CCCTCATCCT TCCCTTCTGG TATTTCCGTT
CGGACAAATC CAACAGACGG 751 ACGATGCTCG GCATAGCCGC AGCCGTATTC
CTTACCGCGC TGTTCCAATT 801 TTCCATGAAC GCCATTCTGG AAACCTTTAC
AGGCATCCGC TACGAAACTG 851 CCGTCGAACG CGTCGCCAAC GGCGGTTTCA
CAGACTTGCC GCGCCAAAGC 901 GAATGGAATA AAGCCCTTGC CGCCTTCCAG
TCCGCCCCGA TATTCGGGCA 951 CGGCTGGAAC AGTTTTGCCC AACAAACCTT
CCTGATCAAT GCCGAACAGC 1001 ACACCATACA CGACAACTTC CTCAGCACCT
TGTTCACCCA TTCCCACAAC 1051 ATCATCCTCC AACTCCTTGC AGAAATGGGG
ATCAGCGGCA CGCTTCTGGT 1101 TGCCGCAACC CTGCTGACGG GCATTGCCGG
GCTGCTGAAA CGCTCCCTGA 1151 CCCCCGCATC ACTTTTCCTG CTGTGCGCGC
TTGCCGTCAG TATGTGCCAC 1201 AGTATGCTCG AATATCCTTT GTGGTATGTC
TATTTCCTCA TCCCCTTCGG 1251 ACTGATGCTC TTTCTGTCCC CCGCAGAGGC
TTCAGACGGC ATCGCCTTCA 1301 AAAAAGCCGC CAATCTCGGC ATACTGACCG
CCTCCGCCGC CATATTCGCA 1351 GGATTGCTGC ACTTGGACTG GACATACACC
CGGCTGGTTA ACTCCTTTTC 1401 CCCCGCCGCT GACGACAGTG CCAAAACCCT
CAACCGGAAA ATCAACGAAC 1451 TGCGCTATAT TTCCGCAAAC AGCCCGATGC
TGTCCTTTTA TGCCGACTTC 1501 TCCCTCGTAA ACTTCGCCCT GCCGGAATAC
CCCGAAACCC AGACTTGGGC 1551 GGAAGAAGCA ACCCTCAAAG CACTAAAATA
CCGCCCCTAC TCCGCCACCT 1601 ACCGCATCGC CCTCTACTTG ATGCGGCAAG
GCAAAGTTGC AGAAGCAAAA 1651 CAATGGATGC GGGCAACACA GTCCTATTAC
CCCTACCTGA TGCCCCGATA 1701 CGCCGACGAA ATCCGCAAAC TGCCCGTATG
GGCACCGCTG CTGCCCGAAC 1751 TGCTCAAAGA CTGCAAAGCC TTCGCCGCCG
CTCCCGGCCA TCCGGAAACA 1801 AAACCCTGCA AATGA
This corresponds to the amino acid sequence <SEQ ID 2516; ORF
738>:
TABLE-US-02964 g738.pep 1 MSAETTVSGA RPAAKLPIYI LPCFLWIGII
PFTFALRLKP SPDFYHDAAA 51 AAGLIVLLFL TAGKKLFDVK IPAISFLLFA
MAAFWWLQAR LMNLIYPGMN 101 DIASWVFILL AVSAWACKSL VAHYGQERIV
TLFAWSLLIG SLLQSCIVVI 151 QFAGWENTPL LQNIIVHRGQ GVIGHIGQRN
NLGHYLMWGI LASAYLNGQR 201 KIPAALGAIC LIMQTAVLGL VNSRTILTYI
AAIALILPFW YFRSDKSNRR 251 TMLGIAAAVF LTALFQFSMN AILETFTGIR
YETAVERVAN GGFTDLPRQS 301 EWNKALAAFQ SAPIFGHGWN SFAQQTFLIN
AEQHTIHDNF LSTLFTHSHN 351 IILQLLAEMG ISGTLLVAAT LLTGIAGLLK
RSLTPASLFL LCALAVSMCH 401 SMLEYPLWYV YFLIPFGLML FLSPAEASDG
IAFKKAANLG ILTASAAIFA 451 GLLHLDWTYT RLVNSFSPAA DDSAKTLNRK
INELRYISAN SPMLSFYADF 501 SLVNFALPEY PETQTWAEEA TLKALKYRPY
SATYRIALYL MRQGKVAEAK 551 QWMRATQSYY PYLMPRYADE IRKLPVWAPL
LPELLKDCKA FAAAPGHPET 601 KPCK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2517>:
TABLE-US-02965 m738.seq 1 ATGCCCGCTG AAACGACCGT ATCCGGCGCG
CACCCCGCCG CCAAACTGCC 51 GATTTACATC CTGCCCTGCT TCCTTTGGAT
AGGCATCGTC CCCTTTACCT 101 TCGCGCTCAA ACTGAAACCG TCGCCCGACT
TTTACCACGA TGCCGCCGCC 151 GCAGCCGGCC TGATTGTCCT GTTGTTCCTC
ACGGCAGGAA AAAAACTGTT 201 TGATGTCAAA ATCCCCGCCA TCAGCTTCCT
TCTGTTTGCA ATGGCGGCGT 251 TTTGGTATCT TCAGGCACGC CTGATGAACC
TGATTTACCC CGGTATGAAC 301 GACATCGTCT CTTGGATTTT CATCTTGCTC
GCCGTCAGCG CGTGGGCCTG 351 CCGGAGCTTG GTCGCACACT TCGGACAAGA
ACGCATCGTG ACCCTGTTTG 401 CCTGGTCGCT GCTTATCGGC TCCCTGCTTC
AATCCTGCAT CGTCGTCATC 451 CAGTTTGCCG GCTGGGAAGA CACCCCTCTG
TTTCAAAACA TCATCGTTTA 501 CAGCGGGCAA GGCGTAATCG GACACATCGG
GCAGCGCAAC AACCTCGGAC 551 ACTACCTCAT GTGGGGCATA CTCGCCGCCG
CCTACCTCAA CGGACAACGA 601 AAAATCCCCG CCGCCCTCGG CGTAATCTGC
CTGATTATGC AGACCGCCGT 651 TTTAGGTTTG GTCAACTCGC GCACCATCTT
GACCTACATA GCCGCCATCG 701 CCCTCATCCT TCCCTTCTGG TATTTCCGTT
CGGACAAATC CAACAGGCGG 751 ACGATGCTCG GCATAGCCGC AGCCGTATTC
CTTACCGCGC TGTTCCAATT 801 TTCCATGAAC ACCATTCTGG AAACCTTTAC
TGGCATCCGC TACGAAACTG 851 CCGTCGAACG CGTCGCCAAC GGCGGTTTCA
CAGACTTGCC GCGCCAAATC 901 GAATGGAATA AAGCCCTTGC CGCCTTCCAG
TCCGCCCCGA TATTCGGGCA 951 CGGCTGGAAC AGTTTTGCCC AACAAACCTT
CCTCATCAAT GCCGAACAGC 1001 ACAACATATA CGACAACCTC CTCAGCAACT
TGTTCACCCA TTCCCACAAC 1051 ATCGTCCTCC AACTCCTTGC AGAGATGGGA
ATCAGCGGCA CGCTTCTGGT 1101 TGCCGCAACC CTGCTGACGG GCATTGCCGG
GCTGCTTAAA CGCCCCCTGA 1151 CCCCCGCATC GCTTTTCCTA ATCTGCACGC
TTGCCGTCAG TATGTGCCAC 1201 AGTATGCTCG AATATCCTTT GTGGTATGTC
TATTTCCTCA TCCCTTTCGG 1251 ACTGATGCTC TTCCTGTCCC CCGCAGAGGC
TTCAGACGGC ATCGCCTTCA 1301 AAAAAGCCGC CAATCTCGGC ATACTGACCG
CCTCCGCCGC CATATTCGCA 1351 GGATTGCTGC ACTTGGACTG GACATACACC
CGGCTGGTTA ACGCCTTTTC 1401 CCCCGCCACT GACGACAGTG CCAAAACCCT
CAACCGGAAA ATCAACGAGT 1451 TGCGCTATAT TTCCGCAAAC AGTCCGATGC
TGTCCTTTTA TGCCGACTTC 1501 TCCCTCGTAA ACTTCGCCCT GCCGGAATAC
CCCGAAACCC AGACTTGGGC 1551 GGAAGAAGCA ACCCTCAAAT CACTAAAATA
CCGCCCCCAC TCCGCCACCT 1601 ACCGCATCGC CCTCTACCTG ATGCGGCAAG
GCAAAGTTGC AGAAGCAAAA 1651 CAATGGATGC GGGCGACACA GTCCTATTAC
CCgTACCTGA TGCCCCGATA 1701 CGCCGACGAA ATCCGCAAAC TGCCCGTATG
GGCGCCGCTG CTACCCGAAC 1751 TGCTCAAAGA CTGCAAAGCC TTCGCCGCCG
CGCCCGGTCA TCCGGAAGCA 1801 AAACCCTGCA AATGA
This corresponds to the amino acid sequence <SEQ ID 2518; ORF
738>:
TABLE-US-02966 m738.pep 1 MPAETTVSGA HPAAKLPIYI LPCFLWIGIV
PFTFALKLKP SPDFYHDAAA 51 AAGLIVLLFL TAGKKLFDVK IPAISFLLFA
MAAFWYLQAR LMNLIYPGMN 101 DIVSWIFILL AVSAWACRSL VAHFGQERIV
TLFAWSLLIG SLLQSCIVVI 151 QFAGWEDTPL FQNIIVYSGQ GVIGHIGQRN
NLGHYLMWGI LAAAYLNGQR 201 KIPAALGVIC LIMQTAVLGL VNSRTILTYI
AAIALILPFW YFRSDKSNRR 251 TMLGIAAAVF LTALFQFSMN TILETFTGIR
YETAVERVAN GGFTDLPRQI 301 EWNKALAAFQ SAPIFGHGWN SFAQQTFLIN
AEQHNIYDNL LSNLFTHSHN 351 IVLQLLAEMG ISGTLLVAAT LLTGIAGLLK
RPLTPASLFL ICTLAVSMCH 401 SMLEYPLWYV YFLIPFGLML FLSPAEASDG
IAFKKAANLG ILTASAAIFA 451 GLLHLDWTYT RLVNAFSPAT DDSAKTLNRK
INELRYISAN SPMLSFYADF 501 SLVNFALPEY PETQTWAEEA TLKSLKYRPH
SATYRIALYL MRQGKVAEAK 551 QWMRATQSYY PYLMPRYADE IRKLPVWAPL
LPELLKDCKA FAAAPGHPEA 601 KPCK*
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 738 shows 95.0% identity over a 604 aa overlap with a
predicted ORF (ORF738.a) from N. gonorrhoeae:
TABLE-US-02967 m738/g738 10 20 30 40 50 60 m738.pep
MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDFYHDAAAAAGLIVLLFL |
||||||||:||||||||||||||||||:||||||:||||||||||||||||||||||| g738
MSAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLKPSPDFYHDAAAAAGLIVLLFL 10 20
30 40 50 60 70 80 90 100 110 120 m738.pep
TAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACRSL
|||||||||||||||||||||||||:||||||||||||||||:||:|||||||||||:|| g738
TAGKKLFDVKIPAISFLLFAMAAFWWLQARLMNLIYPGMNDIASWVFILLAVSAWACKSL 70 80
90 100 110 120 130 140 150 160 170 180 m738.pep
VAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPLFQNIIVYSGQGVIGHIGQRN
|||:||||||||||||||||||||||||||||||||:|||:|||||: |||||||||||| g738
VAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWENTPLLQNIIVHRGQGVIGHIGQRN 130
140 150 160 170 180 190 200 210 220 230 240 m738.pep
NLGHYLMWGILAAAYLNGQRKIPAALGVICLIMQTAVLGLVNSRTILTYIAAIALILPFW
||||||||||||:||||||||||||||:|||||||||||||||||||||||||||||||| g738
NLGHYLMWGILASAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW 190
200 210 220 230 240 250 260 270 280 290 300 m738.pep
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETFTGIRYETAVERVANGGFTDLPRQI
||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| g738
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNAILETFTGIRYETAVERVANGGFTDLPRQS 250
260 270 280 290 300 310 320 330 340 350 360 m738.pep
EWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMG
||||||||||||||||||||||||||||||||||:|:||:||:||||||||:|||||||| g738
EWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHTIHDNFLSTLFTHSHNIILQLLAEMG 310
320 330 340 350 360 370 380 390 400 410 420 m738.pep
ISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHSMLEYPLWYVYFLIPFGLML
||||||||||||||||||||| ||||||||:|:||||||||||||||||||||||||||| g738
ISGTLLVAATLLTGIAGLLKRSLTPASLFLLCALAVSMCHSMLEYPLWYVYFLIPFGLML 370
380 390 400 410 420 430 440 450 460 470 480 m738.pep
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK
||||||||||||||||||||||||||||||||||||||||||||:||||:|||||||||| g738
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNSFSPAADDSAKTLNRK 430
440 450 460 470 480 490 500 510 520 530 540 m738.pep
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYL
|||||||||||||||||||||||||||||||||||||||||||:|||||:|||||||||| g738
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKALKYRPYSATYRIALYL 490
500 510 520 530 540 550 560 570 580 590 600 m738.pep
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: g738
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPET 550
560 570 580 590 600 m738.pep KPCKX ||||| g738 KPCKX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2519>:
TABLE-US-02968 a738.seq 1 ATGCCCGCTG AAACGACCGT ATCCGGCGCG
CACCCCGCCG CCAAACTGCC 51 GATTTACATC CTGCCCTGCT TCCTTTGGAT
AGGCATCGTC CCCTTTACCT 101 TTGCGCTCAG GCTGCAACCG TCGCCCGACT
TTTACCACGA TGCCGCCGCC 151 GCAGCCGGCC TGATTGTCCT GTTGTTCCTC
ACGGCAGGAA AAAAGCTGTT 201 TGATGTCAAA ATCCCACCTA TCAGCTTCCT
TCTGTTTGCA ATGGCGGCGT 251 TTTGGTATCT TCAGGCACGC CTGATGAACC
TGATTTACCC CGGTATGAAC 301 GACATCGTCT CTTGGATTTT CATCTTACTC
GCCGTCAGCG CGTGGGCCTG 351 CCGGAGCTTG GTCGCACACT ACGGACAAGA
ACGCATCGTT ACCCTGTTTG 401 CCTGGTCGCT GCTTATCGGC TCCCTGCTTC
AATCCTGCAT CGTCGTCATC 451 CAGTTTGCCG GCTGGGAAGA CACCCCTCTG
TTTCAAAACA TCATTGTTTA 501 CAGCGGGCAA GGCGTAATCG GACACATCGG
ACAGCGCAAC AACCTCGGAC 551 ACTACCTCAT GTGGGGCATA CTCGCCGCCG
CCTACCTCAA CGGACAACGA 601 AAAATCCCGC CCGCCTTGGG TGCAATCTGC
CTGATTATGC AGACCGCCGT 651 TTTAGGTTTG GTCAATTCGC GCACCATCTT
GACCTACATA GCCGCCATCG 701 CCCTCATCCT TCCCTTCTGG TATTTCCGTT
CGGACAAATC CAACAGGCGG 751 ACGATACTCG GCATAGCCGC AGCCGTATTC
CTTACCGCGC TGTTCCAATT 801 TTCCATGAAC ACCATTCTGG AAACCTTTAC
CGGCATCCGC TACGAAACCG 851 CCGTCGAACG CGTCGCCAAC GGCGGTTTCA
CAGACCTGCC GCGCCAAATC 901 GAATGGCGCA AAGCCCTCGC CGCCTTCCAG
TCCGCCCCGA TATTCGGGCA 951 CGGCTGGAAC AGTTTTGCCC AACAAACCTT
CCTCATCAAT GCCGAACAGC 1001 ACAACATACA CGACAACCTC CTCAGCAACT
TGTTCACCCA TTCCCACAAC 1051 ATCGTTCTCC AACTCCTTGC AGAGATGGGG
ATCAGCGGCA CGCTTCTGGT 1101 TGCCGCAACC CTGCTGACGG GCATTGCCGG
GCTGCTGAAA CGCCCCCTGA 1151 CCCCCGCATC GCTTTTCCTG ATCTGCACAC
TTGCCGTCAG TATGTGCCAC 1201 AGTATGCTCG AATATCCTTT GTGGTATGTC
TATTTCCTCA TCCCCTTCGG 1251 ACTGATGCTC TTTCTGTCCC CCGCAGAGGC
TTCAGACGGC ATCGCCTTCA 1301 AAAAAGCCGC CAATCTCGGC ATACTAACCG
CCTCCGCCGC CATATTCGCA 1351 GGATTGCTGC ACTTGGACTG GACATACACC
CGGATGGTTA ACGCCTTTTC 1401 CCCCGCCACT GACGACAGTG CCAAAACCCT
CAACCGGAAA ATCAACGAGT 1451 TGCGCTATAT TTCCGCAAAC AGTCCGATGC
TGTCCTTTTA TGCCGACTTC 1501 TCCCTCGTAA ACTTCGCCCT GCCGGAATAC
CCCGAAACCC AGACTTGGGC 1551 GGAAGAAGCA ACCCTCAAAT CACTAAAATA
CCGCCCCCAC TCCGCCACCT 1601 ACCGCATCGC CCTCTACCTG ATGCGGCAAG
GCAAAGTTGC AGAAGCAAAA 1651 CAATGGATGC GGGCGACACA GTCCTATTAC
CCCTACCTGA TGCCCCGATA 1701 CGCCGACGAA ATCCGCAAAC TGCCCGTATG
GGCGCCGCTG CTACCCGAAC 1751 TGCTCAAAGA CTGCAAAGCC TTCGCCGCCG
CGCCCGGTCA TCCGGAAGCA 1801 AAACCCTGCA AATGA
This corresponds to the amino acid sequence <SEQ ID 2520; ORF
738.a>:
TABLE-US-02969 a738.pep 1 MPAETTVSGA HPAAKLPIYI LPCFLWIGIV
PFTFALRLQP SPDFYHDAAA 51 AAGLIVLLFL TAGKKLFDVK IPPISFLLFA
MAAFWYLQAR LMNLIYPGMN 101 DIVSWIFILL AVSAWACRSL VAHYGQERIV
TLFAWSLLIG SLLQSCIVVI 151 QFAGWEDTPL FQNIIVYSGQ GVIGHIGQRN
NLGHYLMWGI LAAAYLNGQR 201 KIPPALGAIC LIMQTAVLGL VNSRTILTYI
AAIALILPFW YFRSDKSNRR 251 TILGIAAAVF LTALFQFSMN TILETFTGIR
YETAVERVAN GGFTDLPRQI 301 EWRKALAAFQ SAPIFGHGWN SFAQQTFLIN
AEQHNIHDNL LSNLFTHSHN 351 IVLQLLAEMG ISGTLLVAAT LLTGIAGLLK
RPLTPASLFL ICTLAVSMCH 401 SMLEYLWYV YFLIPFGLML FLSPAEASDG
IAFKKAANLG ILTASAAIFA 451 GLLHLDWTYT RMVNAFSPAT DDSAKTLNRK
INELRYISAN SPMLSFYADF 501 SLVNFALPEY PETQTWAEEA TLKSLKYRPH
SATYRIALYL MRQGKVAEAK 551 QWMRATQSYY PYLMPRYADE IRKLPVWAPL
LPELLKDCKA FAAAPGHPEA 601 KPCK* a738/m738 98.3% identity in 604 aa
overlap 10 20 30 40 50 60 a738.pep
MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALRLQPSPDFYHDAAAAAGLIVLLFL
||||||||||||||||||||||||||||||||||||:|:||||||||||||||||||||| m738
MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDFYHDAAAAAGLIVLLFL 10 20
30 40 50 60 70 80 90 100 110 120 a738.pep
TAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACRSL
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| m738
TAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDIVSWIFILLAVSAWACRSL 70 80
90 100 110 120 130 140 150 160 170 180 a738.pep
VAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPLFQNIIVYSGQGVIGHIGQRN
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m738
VAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPLFQNIIVYSGQGVIGHIGQRN 130
140 150 160 170 180 190 200 210 220 230 240 a738.pep
NLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVLGLVNSRTILTYIAAIALILPFW
||||||||||||||||||||||| |||:|||||||||||||||||||||||||||||||| m738
NLGHYLMWGILAAAYLNGQRKIPAALGVICLIMQTAVLGLVNSRTILTYIAAIALILPFW 190
200 210 220 230 240 250 260 270 280 290 300 a738.pep
YFRSDKSNRRTILGIAAAVFLTALFQFSMNTILETFTGIRYETAVERVANGGFTDLPRQI
|||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||| m738
YFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETFTGIRYETAVERVANGGFTDLPRQI 250
260 270 280 290 300 310 320 330 340 350 360 a738.pep
EWRKALAAFQSAPIFGHGWNSFAQQTFLINAEQHNIHDNLLSNLFTHSHNIVLQLLAEMG ||
|||||||||||||||||||||||||||||||||:||||||||||||||||||||||| m738
EWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHNIYDNLLSNLFTHSHNIVLQLLAEMG 310
320 330 340 350 360 370 380 390 400 410 420 a738.pep
ISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHSMLEYPLWYVYFLIPFGLML
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m738
ISGTLLVAATLLTGIAGLLKRPLTPASLFLICTLAVSMCHSMLEYPLWYVYFLIPFGLML 370
380 390 400 410 420 430 440 450 460 470 480 a738.pep
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRMVNAFSPATDDSAKTLNRK
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| m738
FLSPAEASDGIAFKKAANLGILTASAAIFAGLLHLDWTYTRLVNAFSPATDDSAKTLNRK 430
440 450 460 470 480 490 500 510 520 530 540 a738.pep
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m738
INELRYISANSPMLSFYADFSLVNFALPEYPETQTWAEEATLKSLKYRPHSATYRIALYL 490
500 510 520 530 540 550 560 570 580 590 600 a738.pep
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m738
MRQGKVAEAKQWMRATQSYYPYLMPRYADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEA 550
560 570 580 590 600 a738.pep KPCKX ||||| m738 KPCKX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2521>:
TABLE-US-02970 g739.seq 1 ATGGCAAAAA AACCGAACAA ACCCTTCAGG
CTGACCCCCA AACTCCTGAT 51 ACGCGCCGTA TTGCTCATCT GTATCACCGC
CATCGGCGCA TTGGCAGTAG 101 GCATCGTCAG CACATTCAAC CCGAACGGCG
ACAAAACCCT CCAAACCGAA 151 CCGCAACACA CCGACAGCCC CCGCGAAACC
GAATTCTGGC TGCCAAACGG 201 CGCCGTCGGA CAAGATGCCG CCCAACCCGA
ACACCACCAC GCCGCCTCAT 251 CCGAACCCGC ACAGCCGGAC GGCACAGAAG
AAAGCGGCAG CGGACTGCCG 301 TCCCCTGCCG CACCCAAGAA AAACCGGGTc
AAACCGCGCC CTTCGGATGC 351 GGCCCGGGCA GCCGATTCGT TAACCGGCAC
CGGAACACAA GCTGAAAACA 401 CACTCAAAGA AACCCCCGTA CTGCCCACAA
ACGCCCCCCA TCCCGAACCC 451 CGAAAAGAAA CACCCGAAAA ACAGGCGCAG
CCCAAAGAAA CACCCAAAGA 501 AAAAGAAACG CCCAAAGAAA ACCATACCAA
ACCGGACACC CCGAAAAACA 551 CGCCGGCCAA ACCCCATAAA GAGATTCTCG
ACAACCTCTT TTGA
This corresponds to the amino acid sequence <SEQ ID 2522; ORF
739>:
TABLE-US-02971 g739.pep 1 MAKKPNKPFR LTPKLLIRAV LLICITAIGA
LAVGIVSTFN PNGDKTLQTE 51 PQHTDSPRET EFWLPNGAVG QDAAQPEHHH
AASSEPAQPD GTEESGSGLP 101 SPAAPKKNRV KPRPSDAARA ADSLTGTGTQ
AENTLKETPV LPTNAPHPEP 151 RKETPEKQAQ PKETPKEKET PKENHTKPDT
PKNTPAKPHK EILDNLF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2523>:
TABLE-US-02972 m739.seq 1 ATGGCAAAAA AACCGAACAA ACCCTTCAGG
CTGACCCCCA AACTCCTGAT 51 ACGCGCCGTA TTGCTCATCT GTATCGCCGC
CATCGGCGCA TTGGCAATAG 101 GCATCGTCAG CACATTCAAC CCGAACGGCG
ACAAAACCCT TCAAGCCGAA 151 CCGCAACACA CCGACAGCCC CCGCGAAACC
GAATTCTGGC TGCCAAACGG 201 CGTAGTCGGA CAAGATGCCG CCCAACCCGA
ACACCACCAC GCCGCCTCAT 251 CCGAACCCGC ACAGCCGGAC GGCACAGACG
AAAGCGGCAG CGGACTGCCG 301 TCCCCTGCCG CACCCAAGAA AAACCGGGTC
AAACCGCAAC CTGCCGACAC 351 AGCTCAAACC GACAGGCAGC CGGACGACGC
CGGAACACAA GCTGAAAACA 401 CACTCAAAGA AACCCCCGTA CTGCCCACAA
ACGTCCCCCG TCCCGAACCC 451 CGAAAAGAAA CACCCGAAAA ACAGGCGCAG
CCCAAAGAAA CGCCCAAAGA 501 AAACCATACC AAACCGGACA CCCCGAAAAA
CACGCCGCCC AAACCCCATA 551 AAGAAATTCT CGACAAACTC TTC
This corresponds to the amino acid sequence <SEQ ID 2524; ORF
739>:
TABLE-US-02973 m739.pep 1 MAKKPNKPFR LTPKLLIRAV LLICIAAIGA
LAIGIVSTFN PNGDKTLQAE 51 PQHTDSPRET EFWLPNGVVG QDAAQPEHHH
AASSEPAQPD GTDESGSGLP 101 SPAAPKKNRV KPQPADTAQT DRQPDDAGTQ
AENTLKETPV LPTNVPRPEP 151 RKETPEKQAQ PKETPKENHT KPDTPKNTPP
KPHKEILDKL F
Computer analysis of the amino acid sequences gave the following
results: Homology with a Predicted ORF from N. meningitidis menA
with menB ORF 739 shows 86.3% identity over a 197 aa overlap with a
predicted ORF (ORF739.a) from N. gonorrhoeae:
TABLE-US-02974 m739/g739 10 20 30 40 50 60 m739.pep
MAKKPNKPFRLTPKLLIRAVLLICIAAIGALAIGIVSTFNPNGDKTLQAEPQHTDSPRET
|||||||||||||||||||||||||:||||||:|||||||||||||||:||||||||||| g739
MAKKPNKPFRLTPKLLIRAVLLICITAIGALAVGIVSTFNPNGDKTLQTEPQHTDSPRET 10 20
30 40 50 60 70 80 90 100 110 120 m739.pep
EFWLPNGVVGQDAAQPEHHHAASSEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQT
|||||||:||||||||||||||||||||||||:|||||||||||||||||||:|:|:|:: g739
EFWLPNGAVGQDAAQPEHHHAASSEPAQPDGTEESGSGLPSPAAPKKNRVKPRPSDAARA 70 80
90 100 110 120 130 140 150 160 170 m739.pep
DRQPDDAGTQAENTLKETPVLPTNVPRPEPRKETPEKQAQPKETPKE------NHTKPDT :
:|||||||||||||||||:|:|||||||||||||||||||| ||||||| g739
ADSLTGTGTQAENTLKETPVLPTNAPHPEPRKETPEKQAQPKETPKEKETPKENHTKPDT 130
140 150 160 170 180 180 190 m739.pep PKNTPPKPHKEILDKLF |||||
||||||||:|| g739 PKNTPAKPHKEILDNLFX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2525>:
TABLE-US-02975 a739.seq 1 ATGGCAAAAA AACCGAACAA ACCCTTCAGG
CTGACCCCCA AACTCCTGAT 51 ACGCGCCGTA TTGCTCATCT GTATCACCGC
CATCGGCGCA TTGGCAATAG 101 GCATCGTCAG CACATTCAAC CCGAACGGCG
ACAAAACCCT CCAAACCGAA 151 CCGCAACACA CCGACAGCCC CCGCGAAACC
GAATTCTGGC TGCCAAACGG 201 CGTAGTCGGA CAAGATGCCG CCCAACCCGA
ACACCACCAC GCCTCCTCAT 251 CCGCACCCGC ACAGCCGGAC GGCACAGACG
AAAGCGGCAG CGGACTGCCG 301 TCCCCTGCCG CACCCAAGAA AAACCGGGTC
AAACCGCAAC CTGCCGACAC 351 AGCTCAAACC GACAGGCAGC CGGACGACGC
CGGAGCACAA GCTGAAAACA 401 CACTCAAAGA AACCCCCGTA CTGCCCACAA
ACGTCCCCCG TCCCGAACCC 451 CGAAAAGAAA CACCCGAAAA ACAGGCACAG
CCCAAAGAAA CACCCAAAGA 501 AAAAGAAACG CCCAAAGAAA ACCATACCAA
ACCGGACACC CCGAAAAACA 551 CGCCGCCTAA ACCCCATAAA GAAATTCTCG
ACAACCTCTT CTGA
This corresponds to the amino acid sequence <SEQ ID 2526; ORF
739.a>:
TABLE-US-02976 a739.pep 1 MAKKPNKPFR LTPKLLIRAV LLICITAIGA
LAIGIVSTFN PNGDKTLQTE 51 PQHTDSPRET EFWLPNGVVG QDAAQPEHHH
ASSSAPAQPD GTDESGSGLP 101 SPAAPKKNRV KPQPADTAQT DRQPDDAGAQ
AENTLKETPV LPTNVPRPEP 151 RKETPEKQAQ PKETPKEKET PKENHTKPDT
PKNTPPKPHK EILDNLF* a739/m739 93.9% identity in1 97 aa overlap 10
20 30 40 50 60 a739.pep
MAKKPNKPFRLTPKLLIRAVLLICITAIGALAIGIVSTFNPNGDKTLQTEPQHTDSPRET
|||||||||||||||||||||||||:||||||||||||||||||||||:||||||||||| m739
MAKKPNKPFRLTPKLLIRAVLLICIAAIGALAIGIVSTFNPNGDKTLQAEPQHTDSPRET 10 20
30 40 50 60 70 80 90 100 110 120 a739.pep
EFWLPNGVVGQDAAQPEHHHASSSAPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQT
|||||||||||||||||||||:|| ||||||||||||||||||||||||||||||||||| m739
EFWLPNGVVGQDAAQPEHHHAASSEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQT 70 80
90 100 110 120 130 140 150 160 170 180 a739.pep
DRQPDDAGAQAENTLKETPVLPTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDT
||||||||:||||||||||||||||||||||||||||||||||||| |||||||| m739
DRQPDDAGTQAENTLKETPVLPTNVPRPEPRKETPEKQAQPKETPK------ENHTKPDT 130
140 150 160 170 190 a739.pep PKNTPPKPHKEILDNLFX ||||||||||||||:||
m739 PKNTPPKPHKEILDKLF 180 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2527>:
TABLE-US-02977 g740.seq 1 ATGTCCCGAA ACCTGCTTGT CCGCTGGCTC
GCCGTCTGCC TCATCCCCTT 51 GgcgACGCTT GCCGTTTTCG CCGCCAATcc
gcCCGAAGAC AAACCCCAGC 101 ATCTGATCAA CGGCATCATC CTTGCCTGCG
AAGCGACGTT TTTGTTTAAa 151 ttcgtgctCT TTGAAACCAT CAAGCATCAT
CTTAaacaag gGTTTGATTT 201 GAAACgtcaa ACCATGTTTC TGTTTATTCC
GATTGTTTTG CTGGTTGTGT 251 ATTTGTTCCA CTATTTCGGC GCGTTTTag
This corresponds to the amino acid sequence <SEQ ID 2528; ORF
740.ng>:
TABLE-US-02978 g740.pep 1 MSRNLLVRWL AVCLIPLATL AVFAANPPED
KPQHLINGII LACEATFLFK 51 FVLFETIKHH LKQGFDLKRQ TMFLFIPIVL
LVVYLFHYFG AF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2529>:
TABLE-US-02979 m740.seq 1 ATGTCCCGAA ACCTGCTTGT CCGCTGGCTT
GCCGTCTGCC TCATCCCGTT 51 GGCGACGCTT GCCGTTTTCG CCGCCAATCC
GCCCGAAGAC AAACTCCAGC 101 ATCTGATCAA CGGCATCATC CTTGCCTGCG
AAGCGACGTT TTTGTTTAAA 151 TTCGTCCTTT TCGACACCAT CAAGCATCAT
TTGAAACAAG AGTTTGATTT 201 GAAACGTCAA ACTATGTTGC TGTTTATTCC
GATTATTTTG CTGATTGTGT 251 ATTTGTTCCA CTATTTTGGC GCGTTTTAG
This corresponds to the amino acid sequence <SEQ ID 2530; ORF
740>:
TABLE-US-02980 m740.pep 1 MSRNLLVRWL AVCLIPLATL AVFAANPPED
KLQHLINGII LACEATFLFK 51 FVLFDTIKHH LKQEFDLKRQ TMLLFIPIIL
LIVYLFHYFG AF* m740/g740 93.5% identity in 92 aa overlap 10 20 30
40 50 60 m740.pep
MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACEATFLFKFVLFDTIKHH
||||||||||||||||||||||||||||||| ||||||||||||||||||||||:||||| g740
MSRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACEATFLFKFVLFETIKHH 10 20
30 40 50 60 70 80 90 m740.pep LKQEFDLKRQTMLLFIPIILLIVYLFHYFGAFX |||
||||||||:|||||:||:||||||||||| g740
LKQGFDLKRQTMFLFIPIVLLVVYLFHYFGAFX 70 80 90
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2531>:
TABLE-US-02981 a740.seq 1 ATGTCCCGAA ACCTGCTTGT CCGCTGGCTT
GTCGTCTGCC TGATACCCTT 51 GGCGACGCTT GCCGTTTTCG CCGCCAATCC
GCCCGAAGAC AAACCCCAGC 101 ATCTGATTAA CGGCATCATC CTTGCCTGCG
AAGCGACGTT TTTGTTCAAA 151 TTCGTCCTTT TCGACACCAT CAAGCATCAT
TTGAAACAAG AGTTTGATTT 201 GAAACGTCAA ACTATGTTGC TGTTTATTCC
GATTATTTTG CTGATTGTGT 251 ATTTGTTCCA CTATTTTGGC GCGTTTTAG
This corresponds to the amino acid sequence <SEQ ID 2532; ORF
740.a>:
TABLE-US-02982 a740.pep 1 MSRNLLVRWL VVCLIPLATL AVFAANPPED
KPQHLINGII LACEATFLFK 51 FVLFDTIKHH LKQEFDLKRQ TMLLFIPIIL
LIVYLFHYFG AF* a740/m740 97.8% identity in 92 aa overlap 10 20 30
40 50 60 a740.pep
MSRNLLVRWLVVCLIPLATLAVFAANPPEDKPQHLINGIILACEATFLFKFVLFDTIKHH
||||||||||:|||||||||||||||||||| |||||||||||||||||||||||||||| m740
MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACEATFLFKFVLFDTIKHH 10 20
30 40 50 60 70 80 90 a740.pep LKQEFDLKRQTMLLFIPIILLIVYLFHYFGAFX
||||||||||||||||||||||||||||||||| m740
LKQEFDLKRQTMLLFIPIILLIVYLFHYFGAFX 70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2533>:
TABLE-US-02983 g741.seq 1 GTGAACCGAA CTACCTTCTG CTGCCTTTCT
TTGACCGCCG GCCCTGATTC 51 TGACCGCCTG CAGCAGCGGA GGGGCGGAGG
CGGTGGTGTC GCCGCCGACA 101 TCGGCACGGG GCTTGCCGAT GCATTAACCG
CGCCGCTCGA CCATAAAGAC 151 AAAGGTTTGA AATCCCTAAC ATTGGAAGCC
TCCATTCCCC AAAACGGAAC 201 ACTGACCCTG TCGGCACAAG GTGCGGAAAA
AACTTTCAAA GCCGGCGGCA 251 AAGACAACAG CCTCAACACG GGCAAACTGA
AGAACGACAA AATCAGCCGC 301 TTCGACTTCG TGCAAAAAAT CGAAGTGGAC
GGACAAACCA TCACACTGGC 351 AAGCGGCGAA TTTCAAATAT ACAAACAGGA
TCACTCCGcc gtcgtTgcCC 401 TacgGATTGA AAAAATCAAC AACCCCGACA
AAATCGACAG CCTGATAAAC 451 CAACGCTCCT TCCTTGTCAG CGATTTGGGC
GGAGAACATA CCGCCTTCAA 501 CCAACTGCCT GACGGCAAAG CCGAGTATCA
CGGCAAAGCA TTCAGCTCCG 551 ACGATGCCGA CGGAAAACTG ACCTATACCA
TAGATTTCGC CGCCAAACAG 601 GGACACGGCA AAATCGAACA CCTGAAAACA
CCCGAGCAGA ATGTTGAGCT 651 TGCCTCCGCC GAACTCAAAG CAGATGAAAA
ATCACACGCC GTCATTTTGG 701 GCGACACGCG CTACGGCGGC GAAGAGAAAG
GCACTTACCG CCTCGCCCTT 751 TTCGGCGACC GCGCCCAAGA AATCGCTGGC
TCGGCAACCG TGAAGATAGG 801 GGAAAAGGTT CACGAAATCG GCATCGCCGA
CAAACAGTAG
This corresponds to the amino acid sequence <SEQ ID 2534; ORF
741.ng>:
TABLE-US-02984 g741.pep 1 VNRTTFCCLS LTAGPDSDRL QQRRGGGGGV
AADIGTGLAD ALTAPLDHKD 51 KGLKSLTLEA SIPQNGTLTL SAQGAEKTFK
AGGKDNSLNT GKLKNDKISR 101 FDFVQKIEVD GQTITLASGE FQIYKQDHSA
VVALRIEKIN NPDKIDSLIN 151 QRSFLVSDLG GEHTAFNQLP DGKAEYHGKA
FSSDDADGKL TYTIDFAAKQ 201 GHGKIEHLKT PEQNVELASA ELKADEKSHA
VILGDTRYGG EEKGTYRLAL 251 FGDRAQEIAG SATVKIGEKV HEIGIADKQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2535>:
TABLE-US-02985 m741.seq 1 GTGAATCGAA CTGCCTTCTG CTGCCTTTCT
CTGACCACTG CCCTGATTCT 51 GACCGCCTGC AGCAGCGGAG GGGGTGGTGT
CGCCGCCGAC ATCGGTGCGG 101 GGCTTGCCGA TGCACTAACC GCACCGCTCG
ACCATAAAGA CAAAGGTTTG 151 CAGTCTTTGA CGCTGGATCA GTCCGTCAGG
AAAAACGAGA AACTGAAGCT 201 GGCGGCACAA GGTGCGGAAA AAACTTATGG
AAACGGTGAC AGCCTCAATA 251 CGGGCAAATT GAAGAACGAC AAGGTCAGCC
GTTTCGACTT TATCCGCCAA 301 ATCGAAGTGG ACGGGCAGCT CATTACCTTG
GAGAGTGGAG AGTTCCAAGT 351 ATACAAACAA AGCCATTCCG CCTTAACCGC
CTTTCAGACC GAGCAAATAC 401 AAGATTCGGA GCATTCCGGG AAGATGGTTG
CGAAACGCCA GTTCAGAATC 451 GGCGACATAG CGGGCGAACA TACATCTTTT
GACAAGCTTC CCGAAGGCGG 501 CAGGGCGACA TATCGCGGGA CGGCGTTCGG
TTCAGACGAT GCCGGCGGAA 551 AACTGACCTA CACCATAGAT TTCGCCGCCA
AGCAGGGAAA CGGCAAAATC 601 GAACATTTGA AATCGCCAGA ACTCAATGTC
GACCTGGCCG CCGCCGATAT 651 CAAGCCGGAT GGAAAACGCC ATGCCGTCAT
CAGCGGTTCC GTCCTTTACA 701 ACCAAGCCGA GAAAGGCAGT TACTCCCTCG
GTATCTTTGG CGGAAAAGCC 751 CAGGAAGTTG CCGGCAGCGC GGAAGTGAAA
ACCGTAAACG GCATACGCCA 801 TATCGGCCTT GCCGCCAAGC AATAA
This corresponds to the amino acid sequence <SEQ ID 2536; ORF
741>:
TABLE-US-02986 m741.pep 1 VNRTAFCCLS LTTALILTAC SSGGGGVAAD
IGAGLADALT APLDHKDKGL 51 QSLTLDQSVR KNEKLKLAAQ GAEKTYGNGD
SLNTGKLKND KVSRFDFIRQ 101 IEVDGQLITL ESGEFQVYKQ SHSALTAFQT
EQIQDSEHSG KMVAKRQFRI 151 GDIAGEHTSF DKLPEGGRAT YRGTAFGSDD
AGGKLTYTID FAAKQGNGKI 201 EHLKSPELNV DLAAADIKPD GKRHAVISGS
VLYNQAEKGS YSLGIFGGKA 251 QEVAGSAEVK TVNGIRHIGL AAKQ* m741/g741
61.4% identity in 280 aa overlap 10 20 30 40 50 m741.pep
VNRTAFCCLSLTT---ALILTACSSGGGGVAADIGAGLADALTAPLDHKDKGLQSLTLDQ
||||:|||||||: : | :||||||||||:|||||||||||||||||:||||: g741
VNRTTFCCLSLTAGPDSDRLQQRRGGGGGVAADIGTGLADALTAPLDHKDKGLKSLTLEA 10 20
30 40 50 60 60 70 80 90 100 110 m741.pep
SVRKNEKLKLAAQGAEKTY---GNGDSLNTGKLKNDKVSRFDFIRQIEVDGQLITLESGE |: :|
| |:|||||||: |: :|||||||||||:|||||:::|||||| ||| ||| g741
SIPQNGTLTLSAQGAEKTFKAGGKDNSLNTGKLKNDKISRFDFVQKIEVDGQTITLASGE 70 80
90 100 110 120 120 130 140 150 160 170 m741.pep
FQVYKQSHSALTAFQTEQIQDSEHSGKMVAKRQFRIGDIAGEHTSFDKLPEGGRATYRGT
||:|||:|||::|:: |:|:: :: ::: :|:| ::|::||||:|::||:| :| |:| g741
FQIYKQDHSAVVALRIEKINNPDKIDSLINQRSFLVSDLGGEHTAFNQLPDG-KAEYHGK 130
140 150 160 170 180 190 200 210 220 230 m741.pep
AFGSDDAGGKLTYTIDFAAKQGNGKIEHLKSPELNVDLAAADIKPDGKRHAVISGSVLYN
||:|||| ||||||||||||||:|||||||:|| ||:||:|::| | | |||| |:: |: g741
AFSSDDADGKLTYTIDFAAKQGHGKIEHLKTPEQNVELASAELKADEKSHAVILGDTRYG 180
190 200 210 220 230 240 250 260 270 m741.pep
QAEKGSYSLGIFGGKAQEVAGSAEVKTVNGIRHIGLAAKQX |||:| |::|| :|||:|||| ||
: :::||:| ||| g741 GEEKGTYRLALFGDRAQEIAGSATVKIGEKVHEIGIADKQX 240
250 260 270 280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2537>:
TABLE-US-02987 a741.seq 1 GTGAACCGAA CTGCCTTCTG CTGCCTTTCT
TTGACCGCCG CCCTGATTCT 51 GACCGCCTGC AGCAGCGGAG GCGGCGGTGT
CGCCGCCGAC ATCGGCGCGG 101 TGCTTGCCGA TGCACTAACC GCACCGCTCG
ACCATAAAGA CAAAAGTTTG 151 CAGTCTTTGA CGCTGGATCA GTCCGTCAGG
AAAAACGAGA AACTGAAGCT 201 GGCGGCACAA GGTGCGGAAA AAACTTATGG
AAACGGCGAC AGCCTCAATA 251 CGGGCAAATT GAAGAACGAC AAGGTCAGCC
GCTTCGACTT TATCCGTCAA 301 ATCGAAGTGG ACGGGCAGCT CATTACCTTG
GAGAGCGGAG AGTTCCAAGT 351 GTACAAACAA AGCCATTCCG CCTTAACCGC
CCTTCAGACC GAGCAAGTAC 401 AAGATTCGGA GCATTCAGGG AAGATGGTTG
CGAAACGCCA GTTCAGAATC 451 GGCGATATAG CGGGTGAACA TACATCTTTT
GACAAGCTTC CCGAAGGCGG 501 CAGGGCGACA TATCGCGGGA CGGCATTCGG
TTCAGACGAT GCCAGTGGAA 551 AACTGACCTA CACCATAGAT TTCGCCGCCA
AGCAGGGACA CGGCAAAATC 601 GAACATTTGA AATCGCCAGA ACTCAATGTT
GACCTGGCCG CCTCCGATAT 651 CAAGCCGGAT AAAAAACGCC ATGCCGTCAT
CAGCGGTTCC GTCCTTTACA 701 ACCAAGCCGA GAAAGGCAGT TACTCTCTAG
GCATCTTTGG CGGGCAAGCC 751 CAGGAAGTTG CCGGCAGCGC AGAAGTGGAA
ACCGCAAACG GCATACGCCA 801 TATCGGTCTT GCCGCCAAGC AGTAA
This corresponds to the amino acid sequence <SEQ ID 2538; ORF
741.a>:
TABLE-US-02988 a741.pep 1 VNRTAFCCLS LTAALILTAC SSGGGGVAAD
IGAVLADALT APLDHKDKSL 51 QSLTLDQSVR KNEKLKLAAQ GAEKTYGNGD
SLNTGKLKND KVSRFDFIRQ 101 IEVDGQLITL ESGEFQVYKQ SHSALTALQT
EQVQDSEHSG KMVAKRQFRI 151 GDIAGEHTSF DKLPEGGRAT YRGTAFGSDD
ASGKLTYTID FAAKQGHGKI 201 EHLKSPELNV DLAASDIKPD KKRHAVISGS
VLYNQAEKGS YSLGIFGGQA 251 QEVAGSAEVE TANGIRHIGL AAKQ* a741/m741
95.6% identity in 274 aa overlap 10 20 30 40 50 60 a741.pep
VNRTAFCCLSLTAALILTACSSGGGGVAADIGAVLADALTAPLDHKDKSLQSLTLDQSVR
||||||||||||:|||||||||||||||||||| ||||||||||||||:||||||||||| m741
VNRTAFCCLSLTTALILTACSSGGGGVAADIGAGLADALTAPLDHKDKGLQSLTLDQSVR 10 20
30 40 50 60 70 80 90 100 110 120 a741.pep
KNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQLITLESGEFQVYKQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m741
KNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQLITLESGEFQVYKQ 70 80
90 100 110 120 130 140 150 160 170 180 a741.pep
SHSALTALQTEQVQDSEHSGKMVAKRQFRIGDIAGEHTSFDKLPEGGRATYRGTAFGSDD
|||||||:||||:||||||||||||||||||||||||||||||||||||||||||||||| m741
SHSALTAFQTEQIQDSEHSGKMVAKRQFRIGDIAGEHTSFDKLPEGGRATYRGTAFGSDD 130
140 150 160 170 180 190 200 210 220 230 240 a741.pep
ASGKLTYTIDFAAKQGHGKIEHLKSPELNVDLAASDIKPDKKRHAVISGSVLYNQAEKGS
|:||||||||||||||:|||||||||||||||||:||||| ||||||||||||||||||| m741
AGGKLTYTIDFAAKQGNGKIEHLKSPELNVDLAAADIKPDGKRHAVISGSVLYNQAEKGS 190
200 210 220 230 240 250 260 270 a741.pep
YSLGIFGGQAQEVAGSAEVETANGIRHIGLAAKQX
||||||||:||||||||||:|:||||||||||||| m741
YSLGIFGGKAQEVAGSAEVKTVNGIRHIGLAAKQX 250 260 270
[0375] g742.seq not found yet
[0376] g742.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2539>:
TABLE-US-02989 m742.seq 1 ATGGTTTACG GCATTGCCGA AGCCGATGCG
GGCGACAGCA GTGTGCTTAC 51 TTTGGGCGGC ATGTATCAGA AGAGTAGGGA
GGTTCCTGAT TTTTCGGGCA 101 TTATTTTGCC CTGTGAAAAT CAGAAAACTG
CCCCGTTCAG TTCAACGCCT 151 GCCTGCAACC GGCCTTTGCA ACTGCCGCGC
AACACTTATT TGGGGGAGGA 201 TTGGTCGCGG TTAAGTGCCG ACAAATACAA
CCTTTTCTCA GGATTCAAAC 251 ATGTGTTTGA CAACGGTTGG CAGCTCAATG
CCGAAGTGTC TTATACCAAG 301 AATGAATCCG ATGCGAAGGT GGGGCAGTTT
TTTCTGAAAA ACGAATATGC 351 GGCGGGTTTG TCGGGTGAGG ATGCGGTAGG
CTTTTTGACT GAAAAAAACG 401 AAGTCATCCC GTTCGAGCCG AAAGATAAGG
CATTGGAGAA ACTGAAAGCA 451 TATCGTGATG AAACCGCCAA GGAATACCGG
GAGCGCAAAG ACGATTTTGT 501 TAAAAACCGT TTCGATAATA CTGCTTTCGA
ACAGTATCGC AGCCGCCGTG 551 CCGCAGAACG CAAAGCCGGT TTTGACAAGT
GTATGAGTGA CCCTTTCGCG 601 CTGGACTTTA TCTGTCAAGG TTCTTGGGGG
GATCCGGGCG TTGATGCCGA 651 CAAGGCGGAA TTTGTCGATA AAGCCCTTGC
GAAGGAGGGC ATCTTTAATA 701 ATGCGGCACA ACGTTTTCCA AACAGCCTGT
ATGACTCTTC CTTTAATCGG 751 AAGGCTACCG CCAACCGACG ATACAGTTAT
ATGCCGTTGC GGCATACCAA 801 AGACGACCGC CAATGGGGAA TTAAACTTGA
CCTGACCGGC ACATATGGGC 851 TGTTCGGGCG GGAGCATGAT TTCTTTGTCG
GCTATGCCTA CGGTGATGAA 901 AAGATACGTT CGGAATATCT AGAAATCTAC
GAACGCCGCT ACAGAGTACG 951 TCCGAATACG GGGGCAACGC ACGGCGTGTA
TGCGGGAAGT TGTCAGGAGG 1001 AGCCGGACGG CGATTTGTCG TCTCCTTTGG
TCAGGGGGCA TAAAGAACCC 1051 GATTGGCAGG CGTACGATGA AAAAGGCAAC
CGTACCGTTT ATGCCGAAGA 1101 ATGCAGGAAC GCCAAGAAAA TAAAAACCGA
GCCCAAGCTC GATGCCGAAG 1151 GCAAGCAGGT GTATTACTAT GACGAATACA
GCGGCAGCCG GACACCGGTA 1201 TATGTCGATG TATATGAGCT GGACGAAAAA
GGCAACAAGA TTCAGGAGAC 1251 CAATCCCGAC GGCACGCCTG CCTTTACCGG
TTTTTCCGGT ACGGTGCCGG 1301 TTTGGAAAAC CGTCAAAGTG GCAGACGACC
ATGTTCCTGC GCTGTATAAC 1351 TACGCCAAAT ACCTCAACAC CAACAAAACC
CATTCGCTGA CTGCCAGCAC 1401 GCGTTTCAAC GTAACCGGCC GACTGCACCT
TTTGGGCGGG CTGCACTACA 1451 CGCGCTATGA GACTTCGCAA ACCAAAGATA
TGCCTGTCCG CTATGGGCAG 1501 CCGGCAAGCG ATTTTCAGAC GGCATCGAGC
ATTAGGGCGG ATCAGGACCA 1551 TTACACGGCC AAGATGCAAG GTCATAAATT
GACGCCCTAT GCAGGCATTA 1601 CCTATGACTT GACACCGCAA CAGAGTATTT
ACGGAAGTTA TACCAAAATC 1651 TTCAAACAGC AGGATAATGT CGATGTCAGT
GCCAAAACCG TTTTACCGCC 1701 TTTGGTCGGC ACAAACTATG AGGTAGGCTG
GAAAGGCGCG TTCTTGCAAG 1751 GACGGCTGAA TGCTTCGTTC GCATTGTTTT
ACCTCGAACA GAAAAACCGC 1801 ACGGTCGTCG ATTTCGGCTA TGTTCCCGGA
GCAGGCGGCA AGCAGGGGTC 1851 GTTCCAAACC GTTGCCAAAC CGATAGGCAA
AGTGGTCAGC AGGGGTGCGG 1901 AATTCGAGTT GTCGGGTGAG TTGAACGAAG
ATTGGAAAGT CTTTGCGGGT 1951 TACACCTACA ACAAGAGCCG CTACAAAAAC
GCCGCCGAAG TCAACGCCGA 2001 ACGCCTTGCC AAAAATTCCA GTGCAGACCC
GTACAACTTC AGCAATTTCA 2051 CACCCGTGCA CATATTCCGT TTCGGAACGA
GCTTCCATAT ACCGAATACG 2101 GGGCTGACCG TCGGCGGCGG CGTGTCCGCA
CAAAGCGGCA CAAGCAGTCT 2151 GTATAACATC AGGCAGGGCG GCTACGGGCT
GATAGACGGT TTCGTCCGTT 2201 ACGAATTGGG CAAACACGCC AAATTGAGCC
TCATCGGTAC GAACTTAAAC 2251 GGACGCACTT ATTTTGAGAA CAACTACAAC
CGTACGCGCG GCGCAAACAA 2301 CTTCTACGGA GAGCCGCGCA CTGTCAGCAT
GAAACTGGAT TGGCAGTTTT 2351 AA
This corresponds to the amino acid sequence <SEQ ID 2540; ORF
742>:
TABLE-US-02990 m742.pep 1 MVYGIAEADA GDSSVLTLGG MYQKSREVPD
FSGIILPCEN QKTAPFSSTP 51 ACNRPLQLPR NTYLGEDWSR LSADKYNLFS
GFKHVFDNGW QLNAEVSYTK 101 NESDAKVGQF FLKNEYAAGL SGEDAVGFLT
EKNEVIPFEP KDKALEKLKA 151 YRDETAKEYR ERKDDFVKNR FDNTAFEQYR
SRRAAERKAG FDKCMSDPFA 201 LDFICQGSWG DPGVDADKAE FVDKALAKEG
IFNNAAQRFP NSLYDSSFNR 251 KATANRRYSY MPLRHTKDDR QWGIKLDLTG
TYGLFGREHD FFVGYAYGDE 301 KIRSEYLEIY ERRYRVRPNT GATHGVYAGS
CQEEPDGDLS SPLVRGHKEP 351 DWQAYDEKGN RTVYAEECRN AKKIKTEPKL
DAEGKQVYYY DEYSGSRTPV 401 YVDVYELDEK GNKIQETNPD GTPAFTGFSG
TVPVWKTVKV ADDHVPALYN 451 YAKYLNTNKT HSLTASTRFN VTGRLHLLGG
LHYTRYETSQ TKDMPVRYGQ 501 PASDFQTASS IRADQDHYTA KMQGHKLTPY
AGITYDLTPQ QSIYGSYTKI 551 FKQQDNVDVS AKTVLPPLVG TNYEVGWKGA
FLQGRLNASF ALFYLEQKNR 601 TVVDFGYVPG AGGKQGSFQT VAKPIGKVVS
RGAEFELSGE LNEDWKVFAG 651 YTYNKSRYKN AAEVNAERLA KNSSADPYNF
SNFTPVHIFR FGTSFHIPNT 701 GLTVGGGVSA QSGTSSLYNI RQGGYGLIDG
FVRYELGKHA KLSLIGTNLN 751 GRTYFENNYN RTRGANNFYG EPRTVSMKLD WQF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2541>:
TABLE-US-02991 a742.seq 1 ATGGTTTACG GCATTGCCGA AGCCGATGCG
GGCGACAGCA GTGTGCTTAC 51 TTTGGGCGGC ATGTATCAGA AGAGTAGGGA
GGTTCCTGAT TTTTCGGGCA 101 TTATTTTGTC CTGTGAAAAT CAGAAAACTG
CCCCGTTCAG TTCAACGCCT 151 GCCTGCAACC GGCCTTTGCA ACTGCCGCGC
AACACTTATT TGGGGGAGGA 201 TTGGTCGCGG TTGAGTGCTG ACAAATACAA
CCTTTTCTCA GGTTTCAAAC 251 ATGTGTTTGA CAACGGTTGG CAGCTCAATG
CCGAAGTGTC TTATACCAAG 301 AATGAATCCG ATGCGAAGGT GGGGCAGTTT
TTTCTGAAAA ACGAACATGC 351 GGCGGGTTTG TCAGATGAGG ATGCGGTAGG
CTTTTTGACC GAAAAAAACG 401 AAGTCATCCC GTTCGAGCCG AAAGATAAGG
CATTGGAGAA ACTGAAAGCA 451 TATCGTGACG AAACCGCCAA GGAATACCGT
GAGCGCAAAG ACGATTTTGT 501 TAAAAACCGT TTCGATAATA CTGCTTTCGA
GCAGTACCGC AGCCGCCGTG 551 CCGCAGAACG CAAAGCCGGT TTTGACGAGT
GTATGAGTGC CCCTTTTGCG 601 CTGGACTTTA TCTGTCAAGG TTCTTGGGGG
GATCCGGGTG TTGATGCCGA 651 CAAGTCGGAA TTTGTCGATA AAGCCCTTGC
GAAGGAAGGC ATCTTTAATA 701 ATGCGGCACA ACGTTTTCCA AACAGCCTGT
ATGACTCTTC CTTTAATCGG 751 AAGGCTACCG CCAACCGACG ATACAGTTAT
ATGCCGTTGC GGCATACCAA 801 AGACGACCGC CAATGGGGAA TTAAACTTGA
CCTGACCGGC ACATATGGGC 851 TGTTCGGGCG GGAGCATGAT TTCTTTGTCG
GCTATGCCTA CGGCGATGAA 901 AAGATACGTT CCGAATATCT GGAAATCTAC
GAACGCCGCC ACAGAGTACG 951 TCCGAATACA GGGGCAACGC ACGGCGTGTA
TGCGGGAAGT TGTCAGGGGG 1001 AGCCGGACGG TGATTTGTCT TCTCCTTTGG
TCAGGGGGCA TAAAGAACCC 1051 GATTGGCAGG CGTACGATGA AAAAGGCAAC
CGTACCGTTT ATGCCGAAGA 1101 ATGCAGGAAT GCCAAGAAAA TAAAAACCGA
GCCCAAGCTC GATGCCGAAG 1151 GCAAGCAGGT GTATTACTAT GACGAATACA
GCGGCAGCCG GACGCCAGTA 1201 TATGTCGATG TATATGAACT GGATGAAAAA
GGCAATAAGA TTCAGGAGAC 1251 CAATCCCGAC GGCACGCCTG CCTTTACCGG
TTTTTCCGGT ACGGTGCCGG 1301 TTTGGAAAAC CGTCAAAGTG GCCGACGACC
ATGTTCCTGC GCTGTATAAC 1351 TACGCCAAAT ACCTCAACAC CAACAAAACC
CATTCGCTGA CTGCCGGCAC 1401 GCGTTTCAAC GTAACCGGCC GACTGCATCT
TTTGGGCGGG CTGCACTACA 1451 CGCGCTATGA AACCTCGCAA ACCAAAGATA
TGCCTGTCCG CTATGGGCAG 1501 CCGGCAAGCG ATTTTCAGAC GGCATCGAGC
ATTAAGGCGG ATCAGGACCA 1551 TTATACGGCC AAGATGCAAG GTCATAAATT
GACGCCCTAT GCAGGCATTA 1601 CCTATGATTT GACACCGCAA CAGAGTATTT
ACGGAAGTTA TACCAAAATC 1651 TTCAAACAGC AGGATAATGT CGATGTCAGT
GCCAAAACCG TTTTACCGCC 1701 TTTGGTCGGC ACAAACTATG AGGTAGGCTG
GAAAGGCGCG TTCTTGCAAG 1751 GACGGCTGAA TGCTTCGTTC GCATTGTTTT
ACCTCGAACA GAAAAACCGC 1801 ACGGTCGTCG ATTTTGGCTA TGTTCCCGGA
GCAGGCGGCA AGCAGGGGTC 1851 GTTCCAAACC GTTGCCAAAC CGATAGGCAA
AGTGGTCAGC AGGGGTGCGG 1901 AATTCGAGTT GTCGGGTGAG TTGAACGAAG
ATTGGAAAGT CTTTGCGGGT 1951 TACACCTACA ACAAGAGCCG CTACAAAAAC
GCCGCCGAAG TCAACGCCGA 2001 ACGCCTCGCC AAAAACACAG GCGCAGACCC
GTACAACTTC AGCAATTTCA 2051 CACCCGTGCA CATATTCCGT TTCGGAACGA
GCTTCCATAT ACCGAATACG 2101 GGGCTGACCG TCGGCGGCGG CGTGTCCGCA
CAAAGCGGCA CAAGCAGTCT 2151 GTATAACATC AGGCAGGGCG GCTACGGGCT
GATAGACGGT TTCGTCCGTT 2201 ACGAATTGGG CAAACACGCT AAATTGAGCC
TCATCGGTAC GAACTTAAAC 2251 GGACGCACTT ATTTTGAGAA CAACTACAAC
CGTACGCGCG GCGCAAACAA 2301 CTTCTATGGA GAGCCGCGCA CTGTCAGCAT
GAAACTGGAT TGGCAGTTTT 2351 AA
This corresponds to the amino acid sequence <SEQ ID 2542; ORF
742.a>:
TABLE-US-02992 a742.pep 1 MVYGIAEADA GDSSVLTLGG MYQKSREVPD
FSGIILSCEN QKTAPFSSTP 51 ACNRPLQLPR NTYLGEDWSR LSADKYNLFS
GFKHVFDNGW QLNAEVSYTK 101 NESDAKVGQF FLKNEHAAGL SDEDAVGFLT
EKNEVIPFEP KDKALEKLKA 151 YRDETAKEYR ERKDDFVKNR FDNTAFEQYR
SRRAAERKAG FDECMSAPFA 201 LDFICQGSWG DPGVDADKSE FVDKALAKEG
IFNNAAQRFP NSLYDSSFNR 251 KATANRRYSY MPLRHTKDDR QWGIKLDLTG
TYGLFGREHD FFVGYAYGDE 301 KIRSEYLEIY ERRHRVRPNT GATHGVYAGS
CQGEPDGDLS SPLVRGHKEP 351 DWQAYDEKGN RTVYAEECRN AKKIKTEPKL
DAEGKQVYYY DEYSGSRTPV 401 YVDVYELDEK GNKIQETNPD GTPAFTGFSG
TVPVWKTVKV ADDHVPALYN 451 YAKYLNTNKT HSLTAGTRFN VTGRLHLLGG
LHYTRYETSQ TKDMPVRYGQ 501 PASDFQTASS IKADQDHYTA KMQGHKLTPY
AGITYDLTPQ QSIYGSYTKI 551 FKQQDNVDVS AKTVLPPLVG TNYEVGWKGA
FLQGRLNASF ALFYLEQKNR 601 TVVDFGYVPG AGGKQGSFQT VAKPIGKVVS
RGAEFELSGE LNEDWKVFAG 651 YTYNKSRYKN AAEVNAERLA KNTGADPYNF
SNFTPVHIFR FGTSFHIPNT 701 GLTVGGGVSA QSGTSSLYNI RQGGYGLIDG
FVRYELGKHA KLSLIGTNLN 751 GRTYFENNYN RTRGANNFYG EPRTVSMKLD WQF*
a742/m742 98.5% identity in 783 aa overlap 10 20 30 40 50 60
a742.pep
MVYGIAEADAGDSSVLTLGGMYQKSREVPDFSGIILSCENQKTAPFSSTPACNRPLQLPR
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| m742
MVYGIAEADAGDSSVLTLGGMYQKSREVPDFSGIILPCENQKTAPFSSTPACNRPLQLPR 10 20
30 40 50 60 70 80 90 100 110 120 a742.pep
NTYLGEDWSRLSADKYNLFSGFKHVFDNGWQLNAEVSYTKNESDAKVGQFFLKNEHAAGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| m742
NTYLGEDWSRLSADKYNLFSGFKHVFDNGWQLNAEVSYTKNESDAKVGQFFLKNEYAAGL 70 80
90 100 110 120 130 140 150 160 170 180 a742.pep
SDEDAVGFLTEKNEVIPFEPKDKALEKLKAYRDETAKEYRERKDDFVKNRFDNTAFEQYR |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
SGEDAVGFLTEKNEVIPFEPKDKALEKLKAYRDETAKEYRERKDDFVKNRFDNTAFEQYR 130
140 150 160 170 180 190 200 210 220 230 240 a742.pep
SRRAAERKAGFDECMSAPFALDFICQGSWGDPGVDADKSEFVDKALAKEGIFNNAAQRFP
||||||||||||:||| |||||||||||||||||||||:||||||||||||||||||||| m742
SRRAAERKAGFDKCMSDPFALDFICQGSWGDPGVDADKAEFVDKALAKEGIFNNAAQRFP 190
200 210 220 230 240 250 260 270 280 290 300 a742.pep
NSLYDSSFNRKATANRRYSYMPLRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
NSLYDSSFNRKATANRRYSYMPLRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDE 250
260 270 280 290 300 310 320 330 340 350 360 a742.pep
KIRSEYLEIYERRHRVRPNTGATHGVYAGSCQGEPDGDLSSPLVRGHKEPDWQAYDEKGN
|||||||||||||:|||||||||||||||||| ||||||||||||||||||||||||||| m742
KIRSEYLEIYERRYRVRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWQAYDEKGN 310
320 330 340 350 360 370 380 390 400 410 420 a742.pep
RTVYAEECRNAKKIKTEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
RTVYAEECRNAKKIKTEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPD 370
380 390 400 410 420 430 440 450 460 470 480 a742.pep
GTPAFTGFSGTVPVWKTVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGG
|||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||| m742
GTPAFTGFSGTVPVWKTVKVADDHVPALYNYAKYLNTNKTHSLTASTRFNVTGRLHLLGG 430
440 450 460 470 480 490 500 510 520 530 540 a742.pep
LHYTRYETSQTKDMPVRYGQPASDFQTASSIKADQDHYTAKMQGHKLTPYAGITYDLTPQ
|||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||| m742
LHYTRYETSQTKDMPVRYGQPASDFQTASSIRADQDHYTAKMQGHKLTPYAGITYDLTPQ 490
500 510 520 530 540 550 560 570 580 590 600 a742.pep
QSIYGSYTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
QSIYGSYTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNR 550
560 570 580 590 600 610 620 630 640 650 660 a742.pep
TVVDFGYVPGAGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
TVVDFGYVPGAGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKN 610
620 630 640 650 660 670 680 690 700 710 720 a742.pep
AAEVNAERLAKNTGADPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNI
||||||||||||::|||||||||||||||||||||||||||||||||||||||||||||| m742
AAEVNAERLAKNSSADPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNI 670
680 690 700 710 720 730 740 750 760 770 780 a742.pep
RQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m742
RQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLD 730
740 750 760 770 780 a742.pep WQFX |||| m742 WQFX a742/p25184
sp|P25184|PUPA_PSEPU FERRIC-PSEUDOBACTIN 358 RECEPTOR PRECURSOR
>gi|949231|pir||S15169 ferric-pseudobactin receptor precursor -
Pseudomonas putida >gi|45723 (X56605) pseudobactin uptake
protein [Pseudomonas putida]Length = 819 Score = 152 bits (381),
Expect = 6e-36 Identities = 110/356 (30%), Positives = 170/356
(46%), Gaps = 55/356 (15%) Query: 436
KTVKVADDHV-PALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDM 494 +T
K DD + P + +Y +N+ +RFN+T LHL+ G + Y Sbjct: 511
QTPKPGDDEIIPGI----QYNISNRQSGYFVASRFNLTDDLHLILGARASNYRFDYAL-- 564
Query: 495
PVRYGQPASDFQTASSIKADQDHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQ 554 R
G + ++ ++ +TPYAGI YDLT +QS+Y SYT IFK Q Sbjct: 565
-WRIGNEPAPYKM--------------VERGVVTPYAGIVYDLTNEQSVYASYTDIFKPQ 609
Query: 555
DNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNRTVVDFGYVPGAGGK 614
+NVD++ K L P VG NYE+GWKG FL+GRLNA+ AL+ +++ N VP +GG Sbjct: 610
NNVDITGKP-LDPEVGKNYELGWKGEFLEGRLNANIALYMVKRDNLAESTNEVVPDSGGL 668
Query: 615
QGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTG 674 S
+ + ++G + ELSGE+ W VF GY++ ++ Sbjct: 669
IAS-----RAVDGAETKGVDVELSGEVLPGWNVFTGYSHTRTE----------------D 707
Query: 675
ADPYNFSNFTPVHIFRFGTSFHIPN--TGLTVGGGVSAQSGTS---SLYN--IRQGGYGL 727 AD
+ P+ FRF ++ +P LT+GGGV+ S ++ + YN + Q Y + Sbjct: 708
ADGKRLTPQLPMDTFRFWNTYRLPGEWEKLTLGGGVNWNSKSTLNFARYNSHVTQDDYFV 767
Query: 728 IDGFVRYELGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLDWQF
783 RY + + +L N+ + Y Y G+ YG PR ++ L + F Sbjct: 768
TSLMARYRINESLAATLNVNNIFDKKY----YAGMAGSYGHYGAPRNATVTLRYDF 819
g743.seq not found yet g743.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2543>:
TABLE-US-02993 m743.seq 1 ATGAATCAAA ATCATTTTTC ACTTAAAATT
CTGACCGTTA TGCTGTTATC 51 GGCTTACGGT GGTTCTTTTG CAGACGGTGT
TGTGCCTGTT TCAGACGGCA 101 ATACCGTCAG TCTGGATACG GTCAATGTAC
GCGGCTCTCA TGCTTTGTTG 151 GGCAAGACCG AAAAGACCCG TTCTTATACG
ATAGATCGGA TGTCCACCGC 201 CACAGGTATG AGGATTGCGG GCAAGGATAC
GCCGCAGTCG GTCAGCGTCA 251 TCACGCGCAG CCGCCTTGAC GATAAGGCGG
TGCATACGCT TGAAGAGGCA 301 ATGAAAAACA CGACGGGTGT CAACGTTGTG
CGCGATTCAG GCTTGCAGAC 351 GCGGTTTTTG TCACGCGGTT TCTATATTGA
TCAGATTGGT GAAGACGGTA 401 TGACCGTCAA TGTTGCAGGC CGTTCGGGAT
ATACGGCGAA AATCGACGTG 451 TCTCCGAGTA CCGATTTGGC GGTTTATGAC
CATATTGAAG TTGTACGGGG 501 TGCAACGGGG TTGACCCAAT CCAATTCAGA
GCCGGGAGGA ACCGTCAATT 551 TGATCCGTAA GTGA
This corresponds to the amino acid sequence <SEQ ID 2544; ORF
743>:
TABLE-US-02994 m743.pep 1 MNQNHFSLKI LTVMLLSAYG GSFADGVVPV
SDGNTVSLDT VNVRGSHALL 51 GKTEKTRSYT IDRMSTATGM RIAGKDTPQS
VSVITRSRLD DKAVHTLEEA 101 MKNTTGVNVV RDSGLQTRFL SRGFYIDQIG
EDGMTVNVAG RSGYTAKIDV 151 SPSTDLAVYD HIEVVRGATG LTQSNSEPGG
TVNLIRK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2545>:
TABLE-US-02995 a743.seq 1 ATGAATCAAA ATCATTTTTC ACTTAAAATT
CTGACCGTTA TGCTGTTATC 51 GGCTTACGGT GGTTCTTTTG CAGACGGTGT
TGTGCCTGTT TCAGACGGCA 101 ATACCGTCAG TTTGGATACG GTCAATGTAC
GCGGCTCTCA TGCTCTGTCG 151 GGCAAGACCG AGAAGACCCG TTCTTATACG
ATAGATCGGA TGTCCACCGC 201 CACAGGTATG AGGATTGCGG GCAAGGATAC
GCCGCAGTCG GTCAGCGTCA 251 TCACGCGCAG CCGCCTTGAC GATAAGGCGG
TGCATACGCT TGAAGAGGCA 301 ATGAAAAACA CGACGGGTGT CAACGTTGTG
CGCGATTCAG GCTTGCAGAC 351 GCGGTTTTTG TCACGCGGTT TCTATATTGA
TCAGATTGGT GAAGACGGTA 401 TTACCGTCAA TGTTGCAGGC CGTTCGGGAT
ATACGGCGAA AATCGACGTG 451 TCTCCGAGTA CCGATTTGGC GGTTTATGAC
CATATTGAAG TTGTACGGGG 501 TGCAACGGGG TTGACCCAAT CCAATTCAGA
GCCGGGTGGA ACCGTCAATT 551 TGATCCGTAA GCGA
This corresponds to the amino acid sequence <SEQ ID 2546; ORF
743.a>:
TABLE-US-02996 a743.pep 1 MNQNHFSLKI LTVMLLSAYG GSFADGVVPV
SDGNTVSLDT VNVRGSHALS 51 GKTEKTRSYT IDRMSTATGM RIAGKDTPQS
VSVITRSRLD DKAVHTLEEA 101 MKNTTGVNVV RDSGLQTRFL SRGFYIDQIG
EDGITVNVAG RSGYTAKIDV 151 SPSTDLAVYD HIEVVRGATG LTQSNSEPGG TVNLIRKR
a743/m743 98.9% identity in 187 aa overlap 10 20 30 40 50 60
a743.pep
MNQNHFSLKILTVMLLSAYGGSFADGVVPVSDGNTVSLDTVNVRGSHALSGKTEKTRSYT
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| m743
MNQNHFSLKILTVMLLSAYGGSFADGVVPVSDGNTVSLDTVNVRGSHALLGKTEKTRSYT 10 20
30 40 50 60 70 80 90 100 110 120 a743.pep
IDRMSTATGMRIAGKDTPQSVSVITRSRLDDKAVHTLEEAMKNTTGVNVVRDSGLQTRFL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m743
IDRMSTATGMRIAGKDTPQSVSVITRSRLDDKAVHTLEEAMKNTTGVNVVRDSGLQTRFL 70 80
90 100 110 120 130 140 150 160 170 180 a743.pep
SRGFYIDQIGEDGITVNVAGRSGYTAKIDVSPSTDLAVYDHIEVVRGATGLTQSNSEPGG
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| m743
SRGFYIDQIGEDGMTVNVAGRSGYTAKIDVSPSTDLAVYDHIEVVRGATGLTQSNSEPGG 130
140 150 160 170 180 a743.pep TVNLIRKR ||||||| m743 TVNLIRKX
[0377] g744.seq not found yet
g744.pep not found yet The following partial DNA sequence was
identified in N. meningitidis <SEQ ID 2547>:
TABLE-US-02997 m744.seq 1 ATGAAACCGT TAAAAACATT AGAATTTGGA
TTTGTGGATG CTGCAAACTA 51 CAGAAGAAGA GAAAATAAAG ATTTATTTAA
CCGAATATTT GTAAAAGGAG 101 AATATTTGGA TGAATTATGT GAACCAAATA
TTTCGTTTTT AATCGGAGAA 151 AAGGGAACTG GAAAGACAGC ATATGCTGTT
TATTTAACTA ATAACTTCTA 201 TAAAAACATA CATGCCACTA CTAAGTTTGT
TCGTGAAACC GATTATTCAA 251 AATTTATTCA GCTAAAGAAA GCAAGACACT
TAACTGTTTC AGATTTTACA 301 AGTATTTGGA AAGTCATTTT ATATCTGTTG
ATATCAAATC AAATCAAATG 351 TAAAGAAAAC GGAATATTAT CTTCAATATT
TAATAAATTT AAAGCCTTAG 401 ATGAGGCTAT AAATGAATAT TATTATGGCG
CTTTTGATCC GGAAATTGTA 451 CAAGCAATAA CTTTAATAGA AAATTCAAAA
GAAGCTGCGG AAATGATTTT 501 TGGAAAATTT GTTAAACTAG GTGAAGAGGA
ATCCCAACAA ATAACTTTTA 551 CAGAAAGTAA ATTCCAAGCA AATTTAGGTT
TTATTGAAAG AAAATTTAAA 601 GATGCTTTAT CTCAGTTAAA GCTAAAAGAT
AATCATATTT TGTTTATTGA 651 TGGGATAGAT ATTAGACCAT CACAGATTCC
ATTTGATGAA TATCATGAGT 701 GTGTAAAAGG TCTTGCTAAC GCCATATGGA
TGTTAAATAA TGATATCTTC 751 CCTTCCATTA AAGATAGTAA GGGAAGGATG
AGAGTTGTGT TATTGATTAG 801 ACCTGATATC TTTGATTCAT TAGGTTTACA
AAATCAAAAT ACCAAACTTC 851 AAGATAATTC AGTATTTTTA GACTGGAGGA
CGGATTATAA ATCTTATAGA 901 AGTTCAAAGA TTTTTGGCGT TTTTGATCAT
CTTTTGAGAA CCCAGCAAGA 951 AAAACAAGAT AGTTTAGAAA AAGGCAACTC
ATGGGATTAT TATTTTCCAT 1001 GGAATGCTCC TAATTTACAT GATGAGTATA
AAAATTTAAC TTCATTTATT 1051 AGCTTCCTAA GAAAATCGTA TTATCGACCT
CGCGATATTC TTCAGATGCT 1101 TACTTTGCTA CAAAAAAATA AGAAAAGTAA
GGAAGATTAT GTCGTAGCAG 1151 AAGATTTTGA TAATACTTCT TTTCAAAGAG
AATACTCGAT ATATTTACTT 1201 GGTGAAATCA AAGATCATCT TTTGTTTTAT
TATAGTCAAA GTGATTATCA 1251 AAATTTCCTG AAATTTTTTG AATTTTTAAA
CGGGAAAGAT AGATTTAAAT 1301 ATAGTGATTT TTTAAAAGCA TTTGAACGTT
TGAAAAAGCA CTTACAAACA 1351 ACATCAGTGG AAATACCTAA ATTTATGAGT
ACTGCTAATG AGTTTTTGCA 1401 ATTTTTATTT GACTTGAATG TTATTGCTTA
TTTAGATAAC CCAGAAGATG 1451 AAACGAAACC ATATATCCAT TGGTGCTTTA
AAGATAGAAA TTATGCAAAT 1501 ATTTCTCCTA AAATAAAAAC TGAAACTGAA
TATTTAATAT TTTCAGGATT 1551 ATCAAAAGCC CTTGATGTTG GTACTCCATT
TAAGAACAAA CAGTAA
This corresponds to the amino acid sequence <SEQ ID 2548; ORF
744>:
TABLE-US-02998 m744.pep 1 MKPLKTLEFG FVDAANYRRR ENKDLFNRIF
VKGEYLDELC EPNISFLIGE 51 KGTGKTAYAV YLTNNFYKNI HATTKFVRET
DYSKFIQLKK ARHLTVSDFT 101 SIWKVILYLL ISNQIKCKEN GILSSIFNKF
KALDEAINEY YYGAFDPEIV 151 QAITLIENSK EAAEMIFGKF VKLGEEESQQ
ITFTESKFQA NLGFIERKFK 201 DALSQLKLKD NHILFIDGID IRPSQIPFDE
YHECVKGLAN AIWMLNNDIF 251 PSIKDSKGRM RVVLLIRPDI FDSLGLQNQN
TKLQDNSVFL DWRTDYKSYR 301 SSKIFGVFDH LLRTQQEKQD SLEKGNSWDY
YFPWNAPNLH DEYKNLTSFI 351 SFLRKSYYRP RDILQMLTLL QKNKKSKEDY
VVAEDFDNTS FQREYSIYLL 401 GEIKDHLLFY YSQSDYQNFL KFFEFLNGKD
RFKYSDFLKA FERLKKHLQT 451 TSVEIPKFMS TANEFLQFLF DLNVIAYLDN
PEDETKPYIH WCFKDRNYAN 501 ISPKIKTETE YLIFSGLSKA LDVGTPFKNK Q*
[0378] g745.seq not found yet
[0379] g745.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2549>:
TABLE-US-02999 m745.seq 1 ATGTTTTGGC AACTGACCGT TGTTTCAGTA
ACCGCCGTCA TTGCACTGGG 51 GACAATATTC ATCAATAAGA AAACTTCAAA
GCAAAAGGCG ACATTAGATG 101 TTATTTTGAA TGATTACCAA GATGCACAAT
TTGTAGAAGC CGACAATCAT 151 ATTTCGCCTT ATATTCGCGG CACGGCAGTT
GACGACAACA ACGCGCGGAT 201 CGACCTGTAT GAAATTTATC AAAATAAGGG
CGGACAATGG GAAAAAGAGA 251 GAGGGCATTT ACTTACCGTA ATCAATCGGC
ACGAGTTTTA TGCGTGCGCA 301 ATCAACTCGG GAGTATTGGA TGAGGATTTG
TTTAAACGGC TGCATTGCAC 351 CAACTTCATA AAATTGTGGA ATGCAGTTTC
GCCTCTTGTT ATGAAAATAC 401 GCGAAGAAGA ACGCAAAGAC ACAATATTTA
GAGAGTTGGA AATTTTGGTT 451 GCATTATGGA AAGCAAACCC CCTAAAGGCA
TCTGATTTGT GA
This corresponds to the amino acid sequence <SEQ ID 2550; ORF
745>:
TABLE-US-03000 m745.pep 1 MFWQLTVVSV TAVIALGTIF INKKTSKQKA
TLDVILNDYQ DAQFVEADNH 51 ISPYIRGTAV DDNNARIDLY EIYQNKGGQW
EKERGHLLTV INRHEFYACA 101 INSGVLDEDL FKRLHCTNFI KLWNAVSPLV
MKIREEERKD TIFRELEILV 151 ALWKANPLKA SDL*
[0380] a745.seq not found yet
[0381] a745.pep not found yet
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2551>:
TABLE-US-03001 g746.seq 1 ATGTCCGAAA ACAAACAAAA CGAAGTCCTG
ACCGGTTACG AACAGCTGAA 51 ACGGCGCAAC CGCCGCCGCC TCGTAACGGC
AAGCTCCCTG GTTGCCGCCT 101 CCTGCATCCT GCTGGCAGCC GCACTCAGTT
CCGATCCTGC CGACAGCAAT 151 CCCGCACCGC AGGCCGGCGA AACCGGCGCA
ACGGAAAGCC AAACGGCAAA 201 CACGGCACAA ACCCCTGCCT TGAAATCCGC
CGCCGAAAAC GGGGAAACCG 251 CCGCCGACAA ACCGCAGGAC TTGGCAGGCG
AAGACAAGCC TTCTGCCGCC 301 GACAGCGAAA TCAGCGAGCC TGAAAACGTA
GGCGCGCCGC TGGTGCTGAT 351 TAACGACCGG CTCGAAGACA GCAACATCAA
AGGTTTGGAA GAATCCGAGA 401 AACTGCAACA GGCAGAAACC GCCAAAACCG
AACCGAAGCA GGCAAAACAA 451 CGCGCTGCCG AAAAAGTGTC GGCAACTGCC
GACAGTACGG ATACGGTAGC 501 GGTTGAAAAA CCGAAACGCA CTGCCGAACC
CAAACCGCAA AAAGCGGAAC 551 GCACTGCCGA AGCCAAGCCC AAAGCCAAAG
AAACCAAAAC CGCCGAAAAA 601 GTTGCCGACA AACCGAAAAC TGCTGCCGAA
AAAACCAAAC CGGATACGGC 651 AAAATCCGAC AGCGCGGTAA AAGAAGCGAA
AAAAGCCGAC AAGGCTGAAG 701 GCAAAAAGAC AGCCGAAAAA GACCGTTCGG
ACGGCAAAAA ACACGAAACG 751 GCGCAAAAAA CCGACAAAGC GGACAAAACC
AAAACCGCCG AGAAGGAAAA 801 ATCCGGCAAG GCGGGCAAAA AAGCCGCCAT
TCAGGCAGGT TATGCCGAAA 851 AAGAACGCGC CTTGAGCCTC CAGCGCAAAA
TGAAGGCGGC GGGTATCGAT 901 TCGACCATCA CCGAAATCAT GACCGACAAC
GGCAAAGTTT ACCGCGTCAA 951 ATCAAGCAAC TATAAAAACG CAAGGGATGC
CGAACGCGAT TTGAACAAAC 1001 TGCGCGTGCA CGGCATCGCC GGCCAGGTAA
CGAATGAATA G
This corresponds to the amino acid sequence <SEQ ID 2552; ORF
746.ng>:
TABLE-US-03002 g746.pep 1 MSENKQNEVL TGYEQLKRRN RRRLVTASSL
VAASCILLAA ALSSDPADSN 51 PAPQAGETGA TESQTANTAQ TPALKSAAEN
GETAADKPQD LAGEDKPSAA 101 DSEISEPENV GAPLVLINDR LEDSNIKGLE
ESEKLQQAET AKTEPKQAKQ 151 RAAEKVSATA DSTDTVAVEK PKRTAEPKPQ
KAERTAEAKP KAKETKTAEK 201 VADKPKTAAE KTKPDTAKSD SAVKEAKKAD
KAEGKKTAEK DRSDGKKHET 251 AQKTDKADKT KTAEKEKSGK AGKKAAIQAG
YAEKERALSL QRKMKAAGID 301 STITEIMTDN GKVYRVKSSN YKNARDAERD
LNKLRVHGIA GQVTNE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2553>:
TABLE-US-03003 m746.seq 1 ATGTCCGAAA ACAAACAAAA CGAAGTCCTG
AGCGGTTACG AACAACTCAA 51 ACGGCGCAAC CGCCGCCGCC TCGTAACGGC
AAGTTGCCTG GTTGCCGCCT 101 CCTGCATCCT GCTGGCAGCC GCCCTCAGTT
CCGGCCCTGC CGAACAGACT 151 GCCGGCGAAA CAAGCGGCGT AGAAAACAAA
GCGGCAGGTG CGGCACAAAC 201 CCCTGCCTTG AAATCCGCCG CCGACAAACC
GCAGGACTTG GCAGGCGAAG 251 ACAAGCCTTC TGCCGCCGAC AGCGAAATCA
GCGAGCCTGA AAACGTAGGC 301 GCGCCGCTGG TGCTGATTAA CGAGCGCCTC
GAAGACAGCA ACATCAAAGG 351 TTTGGAAGCA TCCGAGAAAC TGCAACAGGC
AGAAACCGCC AAAACCGCAC 401 CGAAGCAGGC AAAACAACGC GCTGCCGAAA
AAGTGCCGGC AACTGCCGAC 451 AGTACGGATA CGGTAGCGGT TGAAAAACCG
AAACGCACTG CCGAAACAAA 501 ACCGCAAAAA GCGGAACGCA CTGCCAAAGC
CAAGCCCAAA GCCAAAGAAA 551 CCAAAACCGC CGAAAAAGTT GCCGACAAAC
CGAAAACTGC CGCCGAAAAA 601 ACCAAACCGG ATACGGCAAA ATCCGACAGC
GCGGTAAAAG AAGCGAAAAA 651 AGCCGACAAG GCTGAAAGCA AAAAAACAGC
CGAAAAAGAC CGTTCGGACG 701 GCAAAAAACA CGAAACGGCA CAAAAAACCG
ACAAAGCGGA CAAGACCAAA 751 ACCGCCGAGA AGGAAAAATC CGGTAAAAAA
GCCGCCATTC AGGCAGGTTA 801 TGCCGAAAAA GAACGCGCCT TAAGCCTCCA
GCGCAAAATG AAGGCGGCGG 851 GTATCGATTC GACCATCACC GAAATTATGA
CCGACAACGG CAAAGTTTAC 901 CGCGTCAAAT CAAGCAACTA TAAAAACGCA
AGGGATGCCG AACGCGATTT 951 GAACAAATTG CGCGTACACG GTATCGCCGG
TCAGGTAACG AATGAATAG
This corresponds to the amino acid sequence <SEQ ID 2554; ORF
746>:
TABLE-US-03004 m746.pep 1 MSENKQNEVL SGYEQLKRRN RRRLVTASCL
VAASCILLAA ALSSGPAEQT 51 AGETSGVENK AAGAAQTPAL KSAADKPQDL
AGEDKPSAAD SEISEPENVG 101 APLVLINERL EDSNIKGLEA SEKLQQAETA
KTAPKQAKQR AAEKVPATAD 151 STDTVAVEKP KRTAETKPQK AERTAKAKPK
AKETKTAEKV ADKPKTAAEK 201 TKPDTAKSDS AVKEAKKADK AESKKTAEKD
RSDGKKHETA QKTDKADKTK 251 TAEKEKSGKK AAIQAGYAEK ERALSLQRKM
KAAGIDSTIT EIMTDNGKVY 301 RVKSSNYKNA RDAERDLNKL RVHGIAGQVT NE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 746
shows 89.9% identity over a 346 aa overlap with a predicted ORF
(ORF 746) from N. gonorrhoeae:
TABLE-US-03005 m746/g746 89.9% identity in 346 aa overlap 10 20 30
40 50 m746.pep
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQT----AGETSG
||||||||||:||||||||||||||||| ||||||||||||||| ||::: ||||:: g746
MSENKQNEVLTGYEQLKRRNRRRLVTASSLVAASCILLAAALSSDPADSNPAPQAGETGA 10 20
30 40 50 60 60 70 80 90 100 109 m746.pep
VENKAAGAAQTPALKSAA-------DKPQDLAGEDKPSAADSEISEPENVGAPLVLINER
:|:::|::|||||||||| |||||||||||||||||||||||||||||||||:| g746
TESQTANTAQTPALKSAAENGETAADKPQDLAGEDKPSAADSEISEPENVGAPLVLINDR 70 80
90 100 110 120 110 120 130 140 150 160 169 m746.pep
LEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKPKRTAETKPQ
|||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| ||| g746
LEDSNIKGLEESEKLQQAETAKTEPKQAKQRAAEKVSATADSTDTVAVEKPKRTAEPKPQ 130
140 150 160 170 180 170 180 190 200 210 220 229 m746.pep
KAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEK
||||||:||||||||||||||||||||||||||||||||||||||||||||||:|||||| g746
KAERTAEAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAEGKKTAEK 190
200 210 220 230 240 230 240 250 260 270 280 m746.pep
DRSDGKKHETAQKTDKADKTKTAEKEKSGK---KAAIQAGYAEKERALSLQRKMKAAGID
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| g746
DRSDGKKHETAQKTDKADKTKTAEKEKSGKAGKKAAIQAGYAEKERALSLQRKMKAAGID 250
260 270 280 290 300 290 300 310 320 330 m746.pep
STITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNEX
||||||||||||||||||||||||||||||||||||||||||||||| g746
STITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNEX 310 320 330 340
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2555>:
TABLE-US-03006 a746.seq 1 ATGTCCGAAA ACAAACAAAA CGAAGTCCTG
AGCGGTTACG AACAACTCAA 51 ACGGCGCAAC CGCCGCCGCC TCGTAACGGC
AAGTTGCCTG GTTGCCGCCT 101 CCTGCATCCT GCTGGCAGCC GCCCTCAGTT
CCGGCCCTGC CGAACAGACT 151 GCCGGCGAAA CAAGCGGCGT AGAAAACAAA
GCGGCAGGTG CGGCACAAAC 201 CCCTGCCTTG AAATCCGCCG CCGACAAACC
GCAGGACTTG GCAGGCGAAG 251 ACAAGCCTTC TGCCGCCGAC AGCGAAATCA
GCGAGCCTGA AAACGTAGGC 301 GCGCCGCTGG TGCTGATTAA CGACCGCCTC
GAAGACAGCA ACATCAAAGG 351 TTTGGAAGCA TCCGAGAAAC TGCAACAGGC
AGAAACCGCC AAAACCGCAC 401 CGAAGCAGGC AAAACAACGC GCTGCCGAAA
AAGTGCCGGC AACTGCCGAC 451 AGTACGGATA CGGTAGCGGT TGAAAAACCG
AAACGCACTG CCGAAACAAA 501 ACCGCAAAAA GCGGAACGCA CTGCCAAAGC
CAAGCCCAAA GCCAAAGAAA 551 CCAAAACCGC CGAAAAAGTT GCCGACAAAC
CGAAAACTGC CGCCGAAAAA 601 ACCAAACCGG ATACGGCAAA ATCCGACAGC
GCGGTAAAAG AAGCGAAAAA 651 AGCCGACAAG GCTGAAAGCA AAAAAACAGC
CGAAAAAGAC CGTTCGGACG 701 GCAAAAAACA CGAAACGGCA CAAAAAACCG
ACAAAGCGGA CAAGACCAAA 751 ACCGCCGAGA AGGAAAAATC CGGTAAAAAA
GCCGCCATTC AGGCAGGTTA 801 TGCCGAAAAA GAACGCGCCT TAAGCCTCCA
GCGCAAAATG AAGGCGGCGG 851 GTATCGATTC GACCATCACC GAAATTATGA
CCGACAACGG CAAAGTTTAC 901 CGCGTCAAAT CAAGCAACTA TAAAAACGCA
AGGGATGCCG AACGCGATTT 951 GAACAAATTG CGCGTACACG GTATCGCCGG
TCAGGTAACG AATGAATAA
This corresponds to the amino acid sequence <SEQ ID 2556; ORF
746.a>:
TABLE-US-03007 a746.pep 1 MSENKQNEVL SGYEQLKRRN RRRLVTASCL
VAASCILLAA ALSSGPAEQT 51 AGETSGVENK AAGAAQTPAL KSAADKPQDL
AGEDKPSAAD SEISEPENVG 101 APLVLINDRL EDSNIKGLEA SEKLQQAETA
KTAPKQAKQR AAEKVPATAD 151 STDTVAVEKP KRTAETKPQK AERTAKAKPK
AKETKTAEKV ADKPKTAAEK 201 TKPDTAKSDS AVKEAKKADK AESKKTAEKD
RSDGKKHETA QKTDKADKTK 251 TAEKEKSGKK AAIQAGYAEK ERALSLQRKM
KAAGIDSTIT EIMTDNGKVY 301 RVKSSNYKNA RDAERDLNKL RVHGIAGQVT NE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 746
shows 99.7% identity over a 332 aa overlap with a predicted ORF
(ORF 746) from N. meningitidis:
TABLE-US-03008 a746/m746; 99.7% identity in 332 aa overlap 10 20 30
40 50 60 a746.pep
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m746
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENK 10 20
30 40 50 60 70 80 90 100 110 120 a746.pep
AAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEA
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| m746
AAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAPLVLINERLEDSNIKGLEA 70 80
90 100 110 120 130 140 150 160 170 180 a746.pep
SEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKPKRTAETKPQKAERTAKAKPK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m746
SEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKPKRTAETKPQKAERTAKAKPK 130
140 150 160 170 180 190 200 210 220 230 240 a746.pep
AKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m746
AKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA 190
200 210 220 230 240 250 260 270 280 290 300 a746.pep
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m746
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVY 250
260 270 280 290 300 310 320 330 a746.pep
RVKSSNYKNARDAERDLNKLRVHGIAGQVTNEX |||||||||||||||||||||||||||||||||
m746 RVKSSNYKNARDAERDLNKLRVHGIAGQVTNEX 310 320 330
[0382] g747.seq not found yet
[0383] g747.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2557>:
TABLE-US-03009 m747.seq 1 CTGACCCCTT GGGCGGATGC ATATGCAGAT
TTGCGCGGCA AAACCAAAGT 51 GATGACGACC CAGATGGGTG CTTCCCGCGA
TGTCAGCAAA AGCGCCAAAG 101 GTTGGAGTGT CGGTATCGGT CTGAATGTAG
GCAAACAGTT GACCGACAGC 151 GTCGGTCTCG AGTTTGATCC ATACTACCGT
CACAAAACAA TCTACAAACC 201 CCGTGAGATT GTCTTGGACG GTGACAAAAC
CAAAATGGGC CGCTCCAAAT 251 CCAACGAGTA CGGCTTCCGC GTAGCCGCAA
CGTTCTATAG TCAATTAAAA 301 TCAAAATAG
This corresponds to the amino acid sequence <SEQ ID 2558; ORF
747>:
TABLE-US-03010 m747.pep 1 LTPWADAYAD LRGKTKVMTT QMGASRDVSK
SAKGWSVGIG LNVGKQLTDS 51 VGLEFDPYYR HKTIYKPREI VLDGDKTKMG
RSKSNEYGFR VAATFYSQLK 101 SK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2559>:
TABLE-US-03011 a747.seq 1 CTAACCCCTT GGGCGGATGC ATATGCAGAT
TTGCGCGGCA AAACCAAAGT 51 GATGACGACC CAGATGTGTG CTTCCCGCGA
TGTCAGCAAA AGCGCCAAAG 101 GTTGGAGTGT CGGTATCGGT CTGAATGTAG
GCAAACAGTT GACCGACAGC 151 GTCGGTCTCG AGTTTGATCC ATACTACCGT
CACAAAACAA TCTGCAAACC 201 CCGTGAGATT GTTTTGGACG GCGACAAAAC
CAAAATGGGC CGCTCCAAAT 251 CCAACGAGTA CGGCTTCCGC GTAACCGCAA
CGTTCTATAG TCAATTAAAA 301 TCAAAGTAG
This corresponds to the amino acid sequence <SEQ ID 2560; ORF
747.a>:
TABLE-US-03012 a747.pep 1 LTPWADAYAD LRGKTKVMTT QMCASRDVSK
SAKGWSVGIG LNVGKQLTDS 51 VGLEFDPYYR HKTICKPREI VLDGDKTKMG
RSKSNEYGFR VTATFYSQLK 101 SK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 747
shows 97.1% identity over a 102 aa overlap with a predicted ORF
(ORF 746) from N. meningitidis:
TABLE-US-03013 a747/m747 97.1% identity in 102 aa overlap 10 20 30
40 50 60 a747.pep
LTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVGKQLTDSVGLEFDPYYR
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| m747
LTPWADAYADLRGKTKVMTTQMGASRDVSKSAKGWSVGIGLNVGKQLTDSVGLEFDPYYR 10 20
30 40 50 60 70 80 90 100 a747.pep
HKTICKPREIVLDGDKTKMGRSKSNEYGFRVTATFYSQLKSKX ||||
||||||||||||||||||||||||||:||||||||||| m747
HKTIYKPREIVLDGDKTKMGRSKSNEYGFRVAATFYSQLKSKX 70 80 90 100
a747/m80195 gi|150271 (M80195) outer membrane protein [Neisseria
meningitidis] Length = 272 Score = 59.3 bits (141), Expect = 6e-09
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 1
LTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVGKQLTDSVGLEFDPYYR 60 +
PW++ DL + K+ T +D+++ GW G+G N+GK+L +S +E P+Y+ Sbjct: 174
INPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGKKLGESASIEAGPFYK 233
Query: 61 HKTICKPREIVL---DGD-KTKMGRSKSNEYGFRVTATF 95 +T + E + GD +
++ EYG RV F Sbjct: 234 QRTYKESGEFSVTTKSGDVSLTIPKTSIREYGLRVGIKF
272
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2561>:
TABLE-US-03014 g748.seq 1 ATGAGTCAAA ACCAACCCGC ACAACCGACC
AAACGCAATC TGTTCAAAAC 51 CGCCCTTGCC GTCGGCGCAA TCGGCGCAAT
CGGAGGTTAT TTCGGCGGCA 101 AAAAACAGGG CGAAACCGCC GAACGCACCG
CCGAAAGCCA ACACTCGCCC 151 CAAGCCTATC CCTGCTACGG CGAACATCAG
GCAGGTATCG TTACGCCGCG 201 GCAGGCGTTT TCCATTATGT GCGCCTTCGA
CGTAACCGCG CAAAGTGCCA 251 AGCAGCTGGA AAACCTGTTC CGCACACTGA
CCGCCCGCAT CGAGTTTCTC 301 ACCCAAGGCG GAGAATACCA AGACGGCGAC
GACAAACTCC CGTCAGCCGG 351 CAGCGGCATT TTGGGTAAAG CCTTCAACCC
CGACGGATTG ACCGTTACCG 401 TGGGGGTGGG CAGCAGCCTG TTTGACGGCC
GGTTCGGACT CAAAGACAAA 451 AAAACGGTTC ATTTGCAGGA AATGCGCGAC
TTCCCCAACG ATAAGCTGCA 501 AAAAAGCTGG TGCGACGGCG ATTTGAGCCT
GCAAATCTGC GCCTTCACCC 551 CCGAAACCTG CCAAACCGCC CTGCGCGACA
TCATCAAACA CACCGCCCAA 601 ACCGCCGTCA TCCGCTGGAG TATCGACGGG
TGGCAGCCTA AATCCGAACC 651 CGGCGCGATG GCGGCGCGCA ACCTGTTGGG
CTTCCGAGAC GGCACGGGCA 701 ACCCCAAGGT TTCCGATCCC AAAACCGCCG
ACGAGGTTTT ATGGACGGGC 751 GTGGCCGCCA ACAGCCTCGA CGAACCGGAG
TGGGCGAAAA ACGGCAGCTA 801 TCAGGCAGTC CGCCTTATCC GCCGCTTTGT
CGAGTTTTGG GACAGGACGC 851 CGCTTCAAGA GCAAACCGAC ATTTTCGGGC
GGCGAAAATA CAGCGGGGCG 901 CCGATGGACG GCAAAAAAGA AGCCGACCAA
CCGGATTTCG CCAAAGACCC 951 CGAGGGTGAT ATCACGCCCA AAGACAGCCA
TATGCGCCTG GCGAATCCGC 1001 GCGATCCCGA ATTCCTCAAA AAACACTGCC
TCTTCCGCCG CGCCTACAGC 1051 TATTCTCGCG GACCCGCCTC AAGCGGACAG
CTTGATGTCG GGCTGGTGTT 1101 CGTCTGCTAT CAGGCAAATC TTGCCGACGG
TTTCATCTTC GTGCAAAACC 1151 TCCTCAACGG CGAACCGCTG GAAGAATACA
TCAGCCCCTT CGGCGGCGGC 1201 TATTTCTTCG TCTTGCCCGG CGTGGGAAAA
GGCGGATTCT TGGGACAAGG 1251 GCTGCCGGGC GTATAA
This corresponds to the amino acid sequence <SEQ ID 2562; ORF
748.ng>:
TABLE-US-03015 g748.pep 1 MSQNQPAQPT KRNLFKTALA VGAIGAIGGY
FGGKKQGETA ERTAESQHSP 51 QAYPCYGEHQ AGIVTPRQAF SIMCAFDVTA
QSAKQLENLF RTLTARIEFL 101 TQGGEYQDGD DKLPSAGSGI LGKAFNPDGL
TVTVGVGSSL FDGRFGLKDK 151 KTVHLQEMRD FPNDKLQKSW CDGDLSLQIC
AFTPETCQTA LRDIIKHTAQ 201 TAVIRWSIDG WQPKSEPGAM AARNLLGFRD
GTGNPKVSDP KTADEVLWTG 251 VAANSLDEPE WAKNGSYQAV RLIRRFVEFW
DRTPLQEQTD IFGRRKYSGA 301 PMDGKKEADQ PDFAKDPEGD ITPKDSHMRL
ANPRDPEFLK KHCLFRRAYS 351 YSRGPASSGQ LDVGLVFVCY QANLADGFIF
VQNLLNGEPL EEYISPFGGG 401 YFFVLPGVGK GGFLGQGLPG V*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2563>:
TABLE-US-03016 m748.seq 1 ATGAGCAAAA AACAACCCGC ACAACCGACC
AGGCGCACTC TTTTTAAAAC 51 CGCGATCGCA GCCGGAGCAG TCGGCGCAAT
CGGAGGTTAT CTCGGCGGCA 101 AAAAACAGGG CGAAACCGCC GAACGCACCG
CCGAAAGCCA ACACTCGCCC 151 CAAGCCTATC CCTGCTACGG CGAACATCAG
GCAGGCATCG TTACGCCGCA 201 GCAGGCGTTT TCGATTATGT GCGCCTTCGA
CGTAACCGCG CAAAGTGCCA 251 AGCAGCTGGA AAACCTGTTC CGCACGCTGA
CCGCCCGCAT CGAGTTTCTC 301 ACCCAAGGCG GCGAATACCA AGACGGCGAC
GACAAACTTC CGCCAGCCGG 351 CAGCGGCATT TTGGGCAAAG CCTTCAACCC
CGACGGGTTG ACCGTTACCG 401 TGGGGGTGGG CAGCAGCCTG TTTGACGGCC
GGTTCGGACT CAAAGACAAA 451 AAACCGATTC ATTTGCAGGA AATGCGCGAC
TTCTCCAACG ATAAGCTGCA 501 AAAAAGCTGG TGCGACGGCG ATTTGAGCCT
GCAAATCTGT GCCTTCACCC 551 CCGAAACCTG CCAAGCCGCC CTGCGCGACA
TCATCAAACA CACCGTCCAA 601 ACCGCCGTTA TCCGTTGGAG TATCGACGGG
TGGCAGCCCA AATCCGAACC 651 CGGCGCGATG GCGGCGCGCA ACCTGTTGGG
CTTCAGGGAC GGCACGGGCA 701 ACCCCAAAGT TTCCGATCCC AAAACTGCCG
ACGAGGTTTT GTGGACGGGG 751 GTGGCCGCCA ACAGCCTCGA CGAACCGGAG
TGGGCGAAAA ACGGCAGCTA 801 TCAGGCAGTC CGCCTTATCC GCCACTTTGT
CGAGTTTTGG GACAGGACGC 851 CGCTTCAAGA GCAAACCGAC ATTTTCGGGC
GGCGCAAATA CAGCGGTGCG 901 CCGATGGACG GCAAAAAAGA AGCCGACCAA
CCGGATTTTG CCAAAGACCC 951 CGAGGGTGAT ATCACGCCCA AAGACAGCCA
TATACGCCTG GCGAATCCGC 1001 GCGATCCCGA ATTCCTCAAA AAACACCGCC
TCTTCCGCCG CGCCTACAGC 1051 TATTCGCGCG GACTCGCCTC AAGCGGACAG
CTTGATGTCG GGCTGGTGTT 1101 CGTCTGCTAT CAGGCAAACC TTGCCGACGG
ATTCATCTTC GTGCAAAACC 1151 TCCTCAACGG CGAACCGCTG GAAGAATACA
TCAGCCCCTT CGGCGGCGGC 1201 TATTTCTTCG TCTTGCCCGG CGTGGAAAAA
GGCGGCTTTT TGGGGCAAGG 1251 GCTGCTGGGC GTATAA
This corresponds to the amino acid sequence <SEQ ID 2564; ORF
748>:
TABLE-US-03017 m748.pep 1 MSKKQPAQPT RRTLFKTAIA AGAVGAIGGY
LGGKKQGETA ERTAESQHSP 51 QAYPCYGEHQ AGIVTPQQAF SIMCAFDVTA
QSAKQLENLF RTLTARIEFL 101 TQGGEYQDGD DKLPPAGSGI LGKAFNPDGL
TVTVGVGSSL FDGRFGLKDK 151 KPIHLQEMRD FSNDKLQKSW CDGDLSLQIC
AFTPETCQAA LRDIIKHTVQ 201 TAVIRWSIDG WQPKSEPGAM AARNLLGFRD
GTGNPKVSDP KTADEVLWTG 251 VAANSLDEPE WAKNGSYQAV RLIRHFVEFW
DRTPLQEQTD IFGRRKYSGA 301 PMDGKKEADQ PDFAKDPEGD ITPKDSHIRL
ANPRDPEFLK KHRLFRRAYS 351 YSRGLASSGQ LDVGLVFVCY QANLADGFIF
VQNLLNGEPL EEYISPFGGG 401 YFFVLPGVEK GGFLGQGLLG V*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 748
shows 95.0% identity over a 421 aa overlap with a predicted ORF
(ORF 748) from N. gonorrhoeae
TABLE-US-03018 m748/g748 95.0% identity in 421 aa overlap 10 20 30
40 50 60 m748.pep
MSKKQPAQPTRRTLFKLAIAAGAVGAIGGYLGGKKQGETAERTAESQHSPQAYPCYGEHQ
||::||||||:|:|||||:|:||:||||||:||||||||||||||||||||||||||||| g748
MSQNQPAQPTKRNLFKTALAVGAIGAIGGYFGGKKQGETAERTAESQHSPQAYPCYGEHQ 10 20
30 40 50 60 70 80 90 100 110 120 m748.pep
AGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQGGEYQDGDDKLPPAGSGI
||||||:||||||||||||||||||||||||||||||||||||||||||||||| ||||| g748
AGIVTPRQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQGGEYQDGDDKLPSAGSGI 70 80
90 100 110 120 130 140 150 160 170 180 m748.pep
LGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRDFSNDKLQKSWCDGDLSLQIC
||||||||||||||||||||||||||||||| :|||||||| |||||||||||||||||| g748
LGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKTVHLQEMRDFPNDKLQKSWCDGDLSLQIC 130
140 150 160 170 180 190 200 210 220 230 240 m748.pep
AFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPGAMAARNLLGFRDGTGNPKVSDP
||||||||:|||||||||:||||||||||||||||||||||||||||||||||||||||| g748
AFTPETCQTALRDIIKHTAQTAVIRWSIDGWQPKSEPGAMAARNLLGFRDGTGNPKVSDP 190
200 210 220 230 240 250 260 270 280 290 300 m748.pep
KTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHFVEFWDRTPLQEQTDIFGRRKYSGA
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| g748
KTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRRFVEFWDRTPLQEQTDIFGRRKYSGA 250
260 270 280 290 300 310 320 330 340 350 360 m748.pep
PMDGKKEADQPDFAKDPEGDITPKDSHIRLANPRDPEFLKKHRLFRRAYSYSRGLASSGQ
|||||||||||||||||||||||||||:|||||||||||||| ||||||||||| ||||| g748
PMDGKKEADQPDFAKDPEGDITPKDSHMRLANPRDPEFLKKHCLFRRAYSYSRGPASSGQ 310
320 330 340 350 360 370 380 390 400 410 420 m748.pep
LDVGLVFVCYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFVLPGVEKGGFLGQGLLG
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | g748
LDVGLVFVCYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFVLPGVGKGGFLGQGLPG 370
380 390 400 410 420 m748.pep VX || g748 VX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2565>:
TABLE-US-03019 a748.seq 1 ATGAGCAAAA ACCAACCCGC ACAACCGACC
AGGCGCACTC TTTTTAAAAC 51 CGCGATCGCA GCTGGAGCAG TCGGCGCAAT
CGGAGGTTAT CTCGGCGGCA 101 AAAAACGGGG CGAAACCGCC GAACGCACCG
CCGAAAGCCA ACACTCGCCC 151 CAAGCCTATC CCTGCTACGG CGAACATCAG
GCAGGCATCG TTACGCCGCA 201 GCAGGCGTTT TCGATTATGT GCGCCTTCGA
CGTAACCGCG CAAAGTGCCA 251 AGCAGCTGGA AAACCTGTTC CGCACGCTGA
CCGCCCGCAT CGAGTTTCTC 301 ACCCAAGGCG GCGAATACCA AGACGGCGAC
GACAAACTTC CGCCAGCCGG 351 CAGCGGCATT TTGGGCAAAG CCTTCAACCC
CGACGGGTTG ACCGTTACCG 401 TGGGGGTGGG CAGCAGCCTG TTTGACGGCC
GGTTCGGACT CAAAGACAAA 451 AAACCGATTC ATTTGCAGGA AATGCGCGAC
TTCTCCAACG ATAAGCTGCA 501 AAAAAGCTGG TGCGACGGCG ATTTGAGCCT
GCAAATCTGT GCCTTCACCC 551 CCGAAACCTG CCAAGCCGCC CTGCGCGACA
TCATCAAACA CACCGTCCAA 601 ACCGCCGTTA TCCGCTGGAG TATCGACGGG
TGGCAGCCTA AATCCGAACC 651 CGGCGCGATG GCGGCGCGCA ACCTGTTGGG
CTTCCGCGAC GGCACGGGCA 701 ACCCCAAAGT TTCCGACCCC AAAACTGCCG
ACGAGGTTTT GTGGACGGGG 751 GTGGCCGCCA ACAGCCTCGA CGAACCGGAG
TGGGCGAAAA ACGGCAGCTA 801 TCAGGCAGTC CGCCTTATCC GCCACTTTGT
TGAGTTTTGG GACAGGACGC 851 CGCTTCAAGA GCAAACCGAC ATTTTCGGGC
GGCGCAAATA CAGCGGCGCG 901 CCGATGGACG GCAAAAAAGA AGCCGACCAA
CCGGATTTTG CCAAAGACCC 951 CGAGGGGAAT ACCACGCCCA AAGACAGCCA
TATACGCCTG GCGAATCCGC 1001 GCGATCCCGA GTTCCTTAAA AAACACCGCC
TCTTCCGCCG CGCCTACAGC 1051 TATTCGCGCG GACTCGCCTC AAGCGGACAG
CTTGATGTCG GGCTGGTGTT 1101 CGTCTGCTAT CAGGCAAACC TTGCCGACGG
ATTCATCTTC GTGCAAAACC 1151 TCCTCAACGG CGAACCGCTG GAAGAATACA
TCAGCCCCTT CGGCGGCGGC 1201 TATTTCTTCG TCTTGCCCGG CGTGGAAAAA
GGCGGCTTTT TGGGGCAAGG 1251 GCTGCTGGGC GTATAA
This corresponds to the amino acid sequence <SEQ ID 2566; ORF
748.a>:
TABLE-US-03020 a748.pep 1 MSKNQPAQPT RRTLFKTAIA AGAVGAIGGY
LGGKKRGETA ERTAESQHSP 51 QAYPCYGEHQ AGIVTPQQAF SIMCAFDVTA
QSAKQLENLF RTLTARIEFL 101 TQGGEYQDGD DKLPPAGSGI LGKAFNPDGL
TVTVGVGSSL FDGRFGLKDK 151 KPIHLQEMRD FSNDKLQKSW CDGDLSLQIC
AFTPETCQAA LRDIIKHTVQ 201 TAVIRWSIDG WQPKSEPGAM AARNLLGFRD
GTGNPKVSDP KTADEVLWTG 251 VAANSLDEPE WAKNGSYQAV RLIRHFVEFW
DRTPLQEQTD IFGRRKYSGA 301 PMDGKKEADQ PDFAKDPEGN TTPKDSHIRL
ANPRDPEFLK KHRLFRRAYS 351 YSRGLASSGQ LDVGLVFVCY QANLADGFIF
VQNLLNGEPL EEYISPFGGG 401 YFFVLPGVEK GGFLGQGLLG V*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 748
shows 99.0% identity over a 421 aa overlap with a predicted ORF
(ORF 748) from N. meningitidis:
TABLE-US-03021 a748/m748 99.0% identity in 421 aa overlap 10 20 30
40 50 60 a748.pep
MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKRGETAERTAESQHSPQAYPCYGEHQ
|||:|||||||||||||||||||||||||||||||:|||||||||||||||||||||||| m748
MSKKQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTAESQHSPQAYPCYGEHQ 10 20
30 40 50 60 70 80 90 100 110 120 a748.pep
AGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQGGEYQDGDDKLPPAGSGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m748
AGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQGGEYQDGDDKLPPAGSGI 70 80
90 100 110 120 130 140 150 160 170 180 a748.pep
LGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRDFSNDKLQKSWCDGDLSLQIC
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m748
LGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRDFSNDKLQKSWCDGDLSLQIC 130
140 150 160 170 180 190 200 210 220 230 240 a748.pep
AFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPGAMAARNLLGFRDGTGNPKVSDP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m748
AFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPGAMAARNLLGFRDGTGNPKVSDP 190
200 210 220 230 240 250 260 270 280 290 300 a748.pep
KTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHFVEFWDRTPLQEQTDIFGRRKYSGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m748
KTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHFVEFWDRTPLQEQTDIFGRRKYSGA 250
260 270 280 290 300 310 320 330 340 350 360 a748.pep
PMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPRDPEFLKKHRLFRRAYSYSRGLASSGQ
|||||||||||||||||||: ||||||||||||||||||||||||||||||||||||||| m748
PMDGKKEADQPDFAKDPEGDITPKDSHIRLANPRDPEFLKKHRLFRRAYSYSRGLASSGQ 310
320 330 340 350 360 370 380 390 400 410 420 a748.pep
LDVGLVFVCYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFVLPGVEKGGFLGQGLLG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m748
LDVGLVFVCYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFVLPGVEKGGFLGQGLLG 370
380 390 400 410 420 a748.pep VX || m748 VX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2567>:
TABLE-US-03022 g749.seq 1 ATGAGAAAAT TCAATTTGAC CGCATTGTCC
GTGATGCTTG CCTTGGGTTT 51 GACCGCGTGC CAGCCGCCGG AGGCGGAGAA
AGCCGCGCCG GCCGCGTCCG 101 GTGAGACCCA ATCCGCCAAC GAAGGCGGTT
CGGTCGGTAT CGCCGTCAAC 151 GACAATGCCT GCGAACCGAT GAATCTGACC
GTGCCGAGCG GACAGGTTGT 201 GTTCAATATT AAAAACAACA GCGGCCGCAA
GCTCGAATGG GAAATCCTGA 251 AGGGCGTGAT GGTGGTGGAC GAACGCGAAA
ATATCGCCCC GGGGCTTTCC 301 GACAAAATGA CCGTAAccct GCTGCCGGGC
GAATACGAAA TGACCTGCGG 351 CCTTTTGACC AATCCGCGCG GCAAGCTGGT
GGTAGCCGAC AGCGGCTTTA 401 AAGACACCGC CAACGAAGCG GATTTGGAAA
AACTGCCCCA ACCGCTCGCC 451 GACTATAAAG CCTACGTTCA AGGCGAGGTT
AAAGAGCTGG CGGCGAAAAC 501 CAAAACCTTT ACCGAAGCCG TCAAAGCAGG
CGACATTGAA AAGGCGAAAT 551 CCCTGTTTGC CGCCACCCGC GTCCATTACG
AACGCATCGA ACCGATTGCC 601 GAGCTTTTCA GCGAACTCGA CCCCGTCATC
GATGCGTGTG AAGACGACTT 651 CAAAGACGGT GCGAAAGATG CCGGGTTTAC
CGGCTTCCAC CGTATCGAAC 701 ACGCCCTTTG GGTGGAAAAA GACGTATCCG
GCGTGAAGGA AACCGCGGCC 751 AAACTGATGA CCGATGTCGA AGCCCTGCAA
AAAGAAATCG ACGCATTGGC 801 GttccctCCG GGCAAAGTGG TCGGCGGCGC
GTCCGAACTG ATTGAAGAAG 851 CGGCGGGCAG TAAAATCAGC GGCGAAGAAG
ACCgttaCAG CCACACCGAT 901 TTGAGCGACT TCCAAGCTAA TGCGGACGGA
TCTAAAAAAA TCGTCGATTT 951 GTTCCGTCCG TTGATTGAGG CCAAAAACAA
AGCCTTGTTG GAAAAAACCG 1001 ATACCAACTT CAAACAGGTC AACGAAATTC
TGGCGAAATA CCGCACCAAA 1051 GACGGTTTTG AAACCTACGA CAAGCTGAGC
GAAGCCGACC GCAAAGCATT 1101 ACAGGCTCCT ATTAACGCGC TTGCCGAAGA
CCTTGCCCAA CTTCGCGGCA 1151 TACTCGGCTT GAAATAA
This corresponds to the amino acid sequence <SEQ ID 2568; ORF
749.ng>:
TABLE-US-03023 g749.pep 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGETQSAN EGGSVGIAVN 51 DNACEPMNLT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMTVTLLPG EYEMTCGLLT NPRGKLVVAD
SGFKDTANEA DLEKLPQPLA 151 DYKAYVQGEV KELAAKTKTF TEAVKAGDIE
KAKSLFAATR VHYERIEPIA 201 ELFSELDPVI DACEDDFKDG AKDAGFTGFH
RIEHALWVEK DVSGVKETAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEAAGSKIS GEEDRYSHTD 301 LSDFQANADG SKKIVDLFRP LIEAKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLS EADRKALQAP INALAEDLAQ
LRGILGLK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2569>:
TABLE-US-03024 m749.seq 1 ATGAGAAAAT TCAATTTGAC CGCATTGTCC
GTGATGCTTG CCTTAGGTTT 51 GACCGCGTGC CAGCCGCCGG AGGCGGAGAA
AGCTGCGCCG GCAGCGTCCG 101 GTGAGGCGCA AACCGCCAAC GAGGGCGGTT
CGGTCAGTAT CGCCGTCAAC 151 GACAATGCCT GCGAACCGAT GGAACTGACC
GTGCCGAGCG GACAGGTTGT 201 GTTCAATATT AAAAACAACA GCGGCCGCAA
GCTCGAATGG GAAATCCTGA 251 AAGGCGTGAT GGTGGTGGAC GAGCGCGAAA
ACATCGCCCC CGGACTTTCC 301 GATAAAATGA CCGTCACCCT GTTGCCGGGC
GAATACGAAA TGACTTGCGG 351 TCTTTTGACC AATCCGCGCG GCAAGCTGGT
GGTAACCGAC AGCGGCTTTA 401 AAGACACCGC CAACGAAGCG GATTTGGAAA
AACTGTCCCA ACCGCTCGCC 451 GACTATAAAG CCTACGTTCA AGGCGAGGTT
AAAGAGCTGG TGGCGAAAAC 501 CAAAACTTTT ACCGAAGCCG TCAAAGCAGG
CGACATTGAA AAGGCGAAAT 551 CCCTGTTTGC CGACACCCGC GTCCATTACG
AACGCATCGA ACCGATTGCC 601 GAGCTTTTCA GCGAACTCGA CCCCGTCATC
GATGCGCGTG AAGACGACTT 651 CAAAGACGGC GCGAAAGATG CCGGATTTAC
CGGCTTTCAC CGTATCGAAT 701 ACGCCCTTTG GGTGGAAAAA GACGTGTCCG
GCGTGAAGGA AATTGCAGCG 751 AAACTGATGA CCGATGTCGA AGCCCTGCAA
AAAGAAATCG ACGCATTGGC 801 GTTTCCTCCG GGCAAGGTGG TCGGCGGCGC
GTCCGAACTG ATTGAAGAAG 851 TGGCGGGCAG TAAAATCAGC GGCGAAGAAG
ACCGGTACAG CCACACCGAT 901 TTGAGCGACT TCCAAGCCAA TGTGGACGGA
TCTAAAAAAA TCGTCGATTT 951 GTTCCGTCCG CTGATCGAGG CCAAAAACAA
AGCCTTGTTG GAAAAAACCG 1001 ATACCAACTT CAAACAGGTC AACGAAATTC
TGGCGAAATA CCGGACTAAA 1051 GACGGTTTTG AAACCTACGA CAAGCTGGGC
GAAGCCGACC GCAAAGCGTT 1101 ACAGGCCTCT ATTAACGCGC TTGCCGAAGA
CCTTGCCCAA CTTCGCGGCA 1151 TACTCGGCTT GAAATAA
This corresponds to the amino acid sequence <SEQ ID 2570; ORF
749>:
TABLE-US-03025 m749.pep 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGEAQTAN EGGSVSIAVN 51 DNACEPMELT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMTVTLLPG EYEMTCGLLT NPRGKLVVTD
SGFKDTANEA DLEKLSQPLA 151 DYKAYVQGEV KELVAKTKTF TEAVKAGDIE
KAKSLFADTR VHYERIEPIA 201 ELFSELDPVI DAREDDFKDG AKDAGFTGFH
RIEYALWVEK DVSGVKEIAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEVAGSKIS GEEDRYSHTD 301 LSDFQANVDG SKKIVDLFRP LIEAKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLG EADRKALQAS INALAEDLAQ
LRGILGLK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 749
shows 96.1% identity over a 388 aa overlap with a predicted ORF
(ORF 749) from N. gonorrhoeae
TABLE-US-03026 m749/g749 96.1% identity in 388 aa overlap 10 20 30
40 50 60 m749.pep
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT
|||||||||||||||||||||||||||||||||||:|:|||||||:|||||||||||:|| g749
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGSVGIAVNDNACEPMNLT 10 20
30 40 50 60 70 80 90 100 110 120 m749.pep
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g749
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT 70 80
90 100 110 120 130 140 150 160 170 180 m749.pep
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE
||||||||:|||||||||||||||| |||||||||||||||||:|||||||||||||||| g749
NPRGKLVVADSGFKDTANEADLEKLPQPLADYKAYVQGEVKELAAKTKTFTEAVKAGDIE 130
140 150 160 170 180 190 200 210 220 230 240 m749.pep
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK
||||||| |||||||||||||||||||||||| ||||||||||||||||||||:|||||| g749
KAKSLFAATRVHYERIEPIAELFSELDPVIDACEDDFKDGAKDAGFTGFHRIEHALWVEK 190
200 210 220 230 240 250 260 270 280 290 300 m749.pep
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD
||||||| |||||||||||||||||||||||||||||||||||:|||||||||||||||| g749
DVSGVKETAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEAAGSKISGEEDRYSHTD 250
260 270 280 290 300 310 320 330 340 350 360 m749.pep
LSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||: g749
LSDFQANADGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLS 310
320 330 340 350 360 370 380 389 m749.pep
EADRKALQASINALAEDLAQLRGILGLKX ||||||||| ||||||||||||||||||| g749
EADRKALQAPINALAEDLAQLRGILGLKX 370 380
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2571>:
TABLE-US-03027 a749.seq 1 ATGAGAAAAT TCAATTTGAC CGCATTGTCC
GTGATGCTTG CCTTAGGTTT 51 GACCGCGTGC CAGCCGCCGG AGGCGGAGAA
AGCTGCGCCG GCAGCGTCCG 101 GTGAGGCGCA AACCGCCAAC GAGGGCGGTT
CGGTCAGTAT CGCCGTCAAC 151 GACAATGCCT GCGAACCGAT GGAACTGACC
GTGCCGAGCG GACAGGTTGT 201 GTTCAATATT AAAAACAACA GCGGCCGCAA
GCTCGAATGG GAAATCCTGA 251 AAGGCGTGAT GGTGGTGGAC GAGCGCGAAA
ACATCGCCCC CGGACTTTCC 301 GATAAAATGA CCGTCACCCT GTTGCCGGGC
GAATACGAAA TGACTTGCGG 351 TCTTTTGACC AATCCGCGCG GCAAGCTGGT
GGTAACCGAC AGCGGCTTTA 401 AAGACACCGC CAACGAAGCG GATTTGGAAA
AACTGTCCCA ACCGCTCGCC 451 GACTATAAAG CCTATGTTCA AGGCGAAGTC
AAAGAGCTGG TGGCGAAAAC 501 CAAAACCTTT ACCGAAGCCG TCAAAGCAGG
CGACATTGAA AAGGCGAAAT 551 CCCTGTTTGC CGACACCCGC GTCCATTACG
AACGCATCGA ACCGATTGCC 601 GAGCTTTTCA GCGAACTCGA CCCCGTCATC
GATGCGCGTG AAGACGACTT 651 CAAAGACGGC GCGAAAGATG CCGGATTTAC
CGGCTTCCAC CGTATCGAAT 701 ACGCCCTTTG GGTGGAAAAA GACGTGTCCG
GCGTGAAGGA AATTGCAGCG 751 AAACTGATGA CCGATGTCGA AGCCCTGCAA
AAAGAAATCG ACGCATTGGC 801 GTTTCCTCCG GGCAAGGTGG TCGGCGGCGC
GTCCGAACTG ATTGAAGAAG 851 TGGCGGGCAG TAAAATCAGC GGCGAAGAAG
ACCGGTACAG CCACACCGAT 901 TTGAGCGACT TCCAAGCCAA TGTGGACGGA
TCGAAAAAAA TCGTCGATTT 951 GTTCCGTCCG TTGATCGAGA CCAAAAACAA
AGCCTTGTTG GAAAAAACCG 1001 ATACCAACTT CAAACAGGTC AACGAAATTC
TGGCGAAATA CCGGACTAAA 1051 GACGGTTTTG AAACCTACGA CAAGCTGGGC
GAAGCCGACC GCAAAGCGTT 1101 ACAGGCCTCT ATTAACGCGC TTGCCGAAGA
CCTTGCCCAA CTTCGCGGCA 1151 TACTCGGCTT GAAATAA
This corresponds to the amino acid sequence <SEQ ID 2572; ORF
749.a>:
TABLE-US-03028 a749.pep 1 MRKFNLTALS VMLALGLTAC QPPEAEKAAP
AASGEAQTAN EGGSVSIAVN 51 DNACEPMELT VPSGQVVFNI KNNSGRKLEW
EILKGVMVVD ERENIAPGLS 101 DKMTVTLLPG EYEMTCGLLT NPRGKLVVTD
SGFKDTANEA DLEKLSQPLA 151 DYKAYVQGEV KELVAKTKTF TEAVKAGDIE
KAKSLFADTR VHYERIEPIA 201 ELFSELDPVI DAREDDFKDG AKDAGFTGFH
RIEYALWVEK DVSGVKEIAA 251 KLMTDVEALQ KEIDALAFPP GKVVGGASEL
IEEVAGSKIS GEEDRYSHTD 301 LSDFQANVDG SKKIVDLFRP LIETKNKALL
EKTDTNFKQV NEILAKYRTK 351 DGFETYDKLG EADRKALQAS INALAEDLAQ
LRGILGLK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 749
shows 99.7% identity over a 388 aa overlap with a predicted ORF
(ORF 749) from N. meningitidis:
TABLE-US-03029 a749/m749 99.7% identity in 388 aa overlap 10 20 30
40 50 60 a749.pep
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m749
MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGSVSIAVNDNACEPMELT 10 20
30 40 50 60 70 80 90 100 110 120 a749.pep
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m749
VPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT 70 80
90 100 110 120 130 140 150 160 170 180 a749.pep
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m749
NPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEVKELVAKTKTFTEAVKAGDIE 130
140 150 160 170 180 190 200 210 220 230 240 a749.pep
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m749
KAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFKDGAKDAGFTGFHRIEYALWVEK 190
200 210 220 230 240 250 260 270 280 290 300 a749.pep
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m749
DVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGGASELIEEVAGSKISGEEDRYSHTD 250
260 270 280 290 300 310 320 330 340 350 360 a749.pep
LSDFQANVDGSKKIVDLFRPLIETKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m749
LSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTDTNFKQVNEILAKYRTKDGFETYDKLG 310
320 330 340 350 360 370 380 389 a749.pep
EADRKALQASINALAEDLAQLRGILGLKX ||||||||||||||||||||||||||||| m749
EADRKALQASINALAEDLAQLRGILGLKX 370 380
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2573>:
TABLE-US-03030 g750.seq 1 GTGAAACCGC GTTTTTATTG GGCAGcctGC
GCCGTCCTGC CGGCCGCCTG 51 TTCGCCCGAA CCTGCCGCCG AAAAAACTGT
ATccgCCGCA TCCCAAGCCG 101 CATCCACACC TGTCGCCACG CTGACCGTGC
CGACCGCGCG GGGCGATGCC 151 GTTGTGCCGA AGAATCCCGA ACgcgtcgcc
gtgtAcgaCt ggGCGGCGTt 201 ggaTACGCTG ACCGAGCCGG GCGTGAATGT
GGGCGCAACC ACCGCGCCGG 251 TGCGCGTGGA CTATTTGCAG CCTGCATTTG
ACAAGGCGGC AACGGTGGGG 301 ACGCTGTTTG AGCCCGATTG CGAATCCCTG
CACCGCCACA ATCCGCAGTT 351 TGTCATTACC GGCGGGCCGG GTGCGGAAGC
GTATGAACAG TTGGCGAAAA 401 ACGCGACCAC CATAGATTTG ACGGTGGACA
ACGGCAATAT CCGCACCAGC 451 GGCGAGAAGC AGATGGAGAC CCTGTCGCGG
ATTTTCGGTA AGGAAGCGCG 501 CGTGGCGGAA TTGAATGCGC AGATTGACGC
GCTGTTCGCC CAAAAGCGCG 551 AAGCCGCCAA AGGCAAAGGA CGCGGGCTGG
TGCTGTCGGT TACAGGCAAC 601 AAGGTGTCCG CCTTCGGCAC GCAATCGCGG
TTGGCAAGTT GGATACACGG 651 CGACATCGGC CTGCCGCCCG TGGACGAATC
TTTACGCAAC GAAGGGCACG 701 GGCAGCCCGT TTCCTTCGAA TACATCAAAG
AGAAAAACCC CGGCTGGATT 751 TTCATCATCG ACCGCACCGC CGCCATCGGG
CAGGAAGGGC CGGCTGCCGT 801 GGAAGTGTTG GATAACGCGC TGGTATGCGG
CACGAACGCT TGGAAGCGCA 851 AGCAAATCAT CGTCATGCCT GCCGCGAACT
ACATTGTCGC GGGCGGCGCG 901 CGGCAGTTGA TACAGGCGGC GGAACAGTTG
AAGGCGGCGT TTGAAAAGGC 951 AGAACCCGTT GCGGCGCAGT AG
This corresponds to the amino acid sequence <SEQ ID 2574; ORF
750.ng>:
TABLE-US-03031 g750.pep 1 VKPRFYWAAC AVLPAACSPE PAAEKTVSAA
SQAASTPVAT LTVPTARGDA 51 VVPKNPERVA VYDWAALDTL TEPGVNVGAT
TAPVRVDYLQ PAFDKAATVG 101 TLFEPDCESL HRHNPQFVIT GGPGAEAYEQ
LAKNATTIDL TVDNGNIRTS 151 GEKQMETLSR IFGKEARVAE LNAQIDALFA
QKREAAKGKG RGLVLSVTGN 201 KVSAFGTQSR LASWIHGDIG LPPVDESLRN
EGHGQPVSFE YIKEKNPGWI 251 FIIDRTAAIG QEGPAAVEVL DNALVCGTNA
WKRKQIIVMP AANYIVAGGA 301 RQLIQAAEQL KAAFEKAEPV AAQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2575>:
TABLE-US-03032 m750.seq 1 GTGAAACCGC GTTTTTATTG GGCAGCCTGC
GCCGTCCTGC TGACCGCCTG 51 TTCGCCCGAA CCTGCCGCCG AAAAAACTGT
ATCCGCCGCA TCCGCATCTG 101 CCGCCACGCT GACCGTGCCG ACCGCGCGGG
GCGATGCCGT TGTGCCGAAG 151 AATCCCGAAC GCGTCGCCGT GTACGACTGG
GCGGCGTTGG ATACGCTGAC 201 CGAATTGGGC GTGAATGTGG GCGCAACCAC
CGCGCCGGTG CGCGTGGATT 251 ATTTGCAGCC TGCATTTGAC AAGGCGGCAA
CGGTGGGGAC GCTGTTCGAG 301 CCCGATTACG AAGCCCTGCA CCGCTACAAT
CCTCAGCTTG TCATTACCGG 351 CGGGCCGGGC GCGGAAGCGT ATGAACAGTT
AGCGAAAAAC GCGACCACCA 401 TAGATCTGAC GGTGGACAAC GGCAATATCC
GCACCAGCGG CGAAAAGCAG 451 ATGGAGACCT TGGCGCGGAT TTTCGGCAAG
GAAGCGCGCG CGGCGGAATT 501 GAAGGCGCAG ATTGACGCGC TGTTCGCCCA
AACGCGCGAA GCCGCCAAAG 551 GCAAAGGACG CGGGCTGGTG CTGTCGGTTA
CGGGCAACAA GGTGTCCGCC 601 TTCGGCACGC AGTCGCGGTT GGCAAGTTGG
ATACACGGCG ACATCGGCCT 651 ACCGCCTGTA GACGAATCTT TACGCAACGA
GGGGCACGGG CAGCCTGTTT 701 CCTTCGAATA CATCAAAGAG AAAAACCCCG
ATTGGATTTT CATCATCGAC 751 CGTACCGCCG CCATCGGGCA GGAAGGGCCG
GCGGCTGTCG AAGTATTGGA 801 TAACGCGCTG GTACGCGGCA CGAACGCTTG
GAAGCGCAAG CAAATCATCG 851 TCATGCCTGC CGCGAACTAC ATTGTCGCGG
GCGGCGCGCG GCAGTTGATT 901 CAGGCGGCGG AGCAGTTGAA GGCGGCGTTT
AAAAAGGCAG AACCCGTTGC 951 GGCGGGGAAA AAGTAG
This corresponds to the amino acid sequence <SEQ ID 2576; ORF
750>:
TABLE-US-03033 m750.pep 1 VKPRFYWAAC AVLLTACSPE PAAEKTVSAA
SASAATLTVP TARGDAVVPK 51 NPERVAVYDW AALDTLTELG VNVGATTAPV
RVDYLQPAFD KAATVGTLFE 101 PDYEALHRYN PQLVITGGPG AEAYEQLAKN
ATTIDLTVDN GNIRTSGEKQ 151 METLARIFGK EARAAELKAQ IDALFAQTRE
AAKGKGRGLV LSVTGNKVSA 201 FGTQSRLASW IHGDIGLPPV DESLRNEGHG
QPVSFEYIKE KNPDWIFIID 251 RTAAIGQEGP AAVEVLDNAL VRGTNAWKRK
QIIVMPAANY IVAGGARQLI 301 QAAEQLKAAF KKAEPVAAGK K*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 750
shows 93.8% identity over a 322 aa overlap with a predicted ORF
(ORF 750) from N. gonorrhoeae
TABLE-US-03034 m750/g750 93.8% identity in 322 aa overlap 10 20 30
40 50 m750.pep
VKPRFYWAACAVLLTACSPEPAAEKTVSAASASA----ATLTVPTARGDAVVPKNPERVA
||||||||||||| :|||||||||||||||| :| |||||||||||||||||||||| g750
VKPRFYWAACAVLPAACSPEPAAEKTVSAASQAASTPVATLTVPTARGDAVVPKNPERVA 10 20
30 40 50 60 60 70 80 90 100 110 m750.pep
VYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPDYEALHRYNPQLVIT
|||||||||||| ||||||||||||||||||||||||||||||||| |:|||:|||:||| g750
VYDWAALDTLTEPGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPDCESLHRHNPQFVIT 70 80
90 100 110 120 120 130 140 150 160 170 m750.pep
GGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGKEARAAELKAQIDALFA
||||||||||||||||||||||||||||||||||||||:||||||||:|||:|||||||| g750
GGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLSRIFGKEARVAELNAQIDALFA 130
140 150 160 170 180 180 190 200 210 220 230 m750.pep
QTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFE |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g750
QKREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFE 190
200 210 220 230 240 240 250 260 270 280 290 m750.pep
YIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNAWKRKQIIVMPAANYIVAGGA
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| g750
YIKEKNPGWIFIIDRTAAIGQEGPAAVEVLDNALVCGTNAWKRKQIIVMPAANYIVAGGA 250
260 270 280 290 300 300 310 320 m750.pep RQLIQAAEQLKAAFKKAEPVAAGKKX
||||||||||||||:||||||| g750 RQLIQAAEQLKAAFEKAEPVAAQX 310 320
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2577>:
TABLE-US-03035 a750.seq 1 GTGAAACCGC GTTTTTATTG GGCAGCCTGC
GCCGTCCTGC TGACCGCCTG 51 TTCGCCCGAA CCTGCCGCCG AAAAAACTGT
ATCCGCCGCA TCCGCATCTG 101 CCGCCACACT GACCGTGCCG ACCGCGCGGG
GCGATGCCGT TGTGCCGAAG 151 AATCCCGAAC GCGTCGCCGT GTACGACTGG
GCGGCGTTGG ATACGCTGAC 201 CGAATTGGGT GTGAATGTGG GCGCAACCAC
CGCGCCGGTG CGCGTGGATT 251 ATTTGCAGCC TGCATTTGAC AAGGCGGCAA
CGGTGGGGAC GCTGTTCGAG 301 CCCGATTACG AAGCCCTGCA CCGCTACAAT
CCTCAGCTTG TCATTACCGG 351 CGGGCCGGGC GCGGAAGCGT ATGAACAGTT
GGCGAAAAAC GCGACCACCA 401 TAGATCTGAC GGTGGACAAC GGCAATATCC
GCACCAGCGG CGAAAAGCAG 451 ATGGAGACCT TGGCGCGGAT TTTCGGCAAG
GAAGCGCGCG CGGCGGAATT 501 GAAGGCGCAG ATTGACGCGC TGTTCGCCCA
AACGCGCGAA GCCGCCAAAG 551 GCAAAGGACG CGGGCTGGTG CTGTCGGTTA
CGGGCAACAA GGTGTCCGCC 601 TTCGGCACGC AGTCGCGGTT GGCAAGTTGG
ATACACGGCG ACATCGGCCT 651 ACCGCCTGTA GACGAATCTT TACGCAACGA
GGGGCACGGG CAGCCTGTTT 701 CCTTCGAATA CATCAAAGAG AAAAACCCCG
ATTGGATTTT CATCATCGAC 751 CGTACCGCCG CCATCGGGCA GGAAGGGCCG
GCGGCTGTCG AAGTATTGGA 801 TAACGCGCTG GTACGCGGCA CGAACGCTTG
GAAGCGCAAG CAAATCATCG 851 TCATGCCTGC CGCGAACTAC ATTGTCGCGG
GCGGCTCGCG GCAGTTGATT 901 CAGGCGGCGG AGCAGTTGAA GGAGGCGTTT
GAAAAGGCAG AACCCGTTGC 951 GGCGGGGAAA GAGTAG
This corresponds to the amino acid sequence <SEQ ID 2578; ORF
750.a>:
TABLE-US-03036 a750.pep 1 VKPRFYWAAC AVLLTACSPE PAAEKTVSAA
SASAATLTVP TARGDAVVPK 51 NPERVAVYDW AALDTLTELG VNVGATTAPV
RVDYLQPAFD KAATVGTLFE 101 PDYEALHRYN PQLVITGGPG AEAYEQLAKN
ATTIDLTVDN GNIRTSGEKQ 151 METLARIFGK EARAAELKAQ IDALFAQTRE
AAKGKGRGLV LSVTGNKVSA 201 FGTQSRLASW IHGDIGLPPV DESLRNEGHG
QPVSFEYIKE KNPDWIFIID 251 RTAAIGQEGP AAVEVLDNAL VRGTNAWKRK
QIIVMPAANY IVAGGSRQLI 301 QAAEQLKEAF EKAEPVAAGK E*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 750
shows 98.8% identity over a 321 aa overlap with a predicted ORF
(ORF 750) from N. meningitidis:
TABLE-US-03037 a750/m750 98.8% identity in 321 aa overlap 10 20 30
40 50 60 a750.pep
VKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARGDAVVPKNPERVAVYDW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m750
VKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARGDAVVPKNPERVAVYDW 10 20
30 40 50 60 70 80 90 100 110 120 a750.pep
AALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPDYEALHRYNPQLVITGGPG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m750
AALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPDYEALHRYNPQLVITGGPG 70 80
90 100 110 120 130 140 150 160 170 180 a750.pep
AEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGKEARAAELKAQIDALFAQTRE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m750
AEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGKEARAAELKAQIDALFAQTRE 130
140 150 160 170 180 190 200 210 220 230 240 a750.pep
AAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m750
AAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLPPVDESLRNEGHGQPVSFEYIKE 190
200 210 220 230 240 250 260 270 280 290 300 a750.pep
KNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNAWKRKQIIVMPAANYIVAGGSRQLI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| m750
KNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNAWKRKQIIVMPAANYIVAGGARQLI 250
260 270 280 290 300 310 320 a750.pep QAAEQLKEAFEKAEPVAAGKEX |||||||
||:|||||||||:| m750 QAAEQLKAAFKKAEPVAAGKKX 310 320
[0384] g751.seq not found yet
[0385] g751.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2579>:
TABLE-US-03038 m751.seq.. 1 ATGGCTTGGA GTATGTTTGC CACAACCCAA
GCCGATAGAG CGGTAAGGTC 51 TGCAACTGCA CCTAAAGAAA TGTGGTTCCA
TAAGAAGATA ATAGATGAAA 101 AAACAGGTAA AGTATCCTTT GATACCAGAC
AAATTTGGTC ATTGAATGAT 151 TTAAGCAAGG AAGAACTGGC AAGCATTCAA
GACACAAATG GCAAAGTTAT 201 TACTGTGTCT AATCCTGGTA TTTTCAATAA
TCGAGAAGAT TCATTAAGCA 251 ACGCAGCAAA ACAAAATCGT AATAGTACAA
ACGGTAGTGG TGTTATTGCA 301 GTCATGAATC CTCCAACAGG GAAATATAAA
TCTGATTCTA ATAACAAAAT 351 AAAAGATTTT TTATGGCTCG GTTCAAGTCT
TGTTTCTGAA CTGATGTATG 401 TCGGTTACGA CCAATTAAAT AATAAAGTGT
TCCAAGGCTA TTTACCCAAA 451 ACCAATTCAG AAAAACTGAA TCAAGATATT
TATCGAGAGG TTCAAAAAAT 501 GGGTAACGGC TGGTCGGTTG ATACCAGTAA
TCACAGTCGT GGGGGAATTA 551 CAGCAAGCGT TTCCTTAAAA GATTGGGTAA
ACAATCAAAA ACAAAATGGC 601 ATTGCCCCAA TCAGAAAAGC ACGTTTCTAT
GGTACAGCCA CAAATGTGCA 651 GAATGATTAC GCCGATGTTT TACAGAAAAA
CGGCTATACC TATACGGGTG 701 CAGACGGCAA AACTTATAAC AGCGGATCCT
ACTCAATCGT GCATGATAAA 751 GATTTTGTGG GGAACAAATG GATACCTTTC
TTGCTAGGAA CCAATGACAC 801 CACACAAGGT ACATGTAAGG GGTTGTGCTA
TTCGCATAGC AGTTATTTTG 851 CGGAGGTGCC AAAAGCAGGT ACAAAAGAAT
TTGATGACTA TGTAAAAATA 901 TGGGGTGAAG TTGAATATGA CGCTCAAGGT
AAGCCAATTA ACAAATCTAA 951 ACCCATACTG GTAGAACCAA ACAAAACAAA
AGATAATGAA AAATATGAAA 1001 AAGAAGCTTT CTAA
This corresponds to the amino acid sequence <SEQ ID 2580; ORF
751>:
TABLE-US-03039 m751.pep.. 1 MAWSMFATTQ ADRAVRSATA PKEMWFHKKI
IDEKTGKVSF DTRQIWSLND 51 LSKEELASIQ DTNGKVITVS NPGIFNNRED
SLSNAAKQNR NSTNGSGVIA 101 VMNPPTGKYK SDSNNKIKDF LWLGSSLVSE
LMYVGYDQLN NKVFQGYLPK 151 TNSEKLNQDI YREVQKMGNG WSVDTSNHSR
GGITASVSLK DWVNNQKQNG 201 IAPIRKARFY GTATNVQNDY ADVLQKNGYT
YTGADGKTYN SGSYSIVHDK 251 DFVGNKWIPF LLGTNDTTQG TCKGLCYSHS
SYFAEVPKAG TKEFDDYVKI 301 WGEVEYDAQG KPINKSKPIL VEPNKTKDNE
KYEKEAF*
[0386] a751.seq not found yet
[0387] a751.pep not found yet
[0388] g752.seq not found yet
[0389] g752.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2581>:
TABLE-US-03040 m752.seq.. 1 ATGAAAATTT CCAGACCTCC GGAATTTACC
CTGTTGCAAC AGGAATATAT 51 GCAGCATCTC ACTGAAAGAA TGACGCAAAT
TGCCAAGCTG CTGAATTCTT 101 CCGCAAACAA TCCTGATATA GACATTCCCG
ATTTTCTTAC TGAAATCAAA 151 GATTATTCAG AATTTTCCGT GACAGATGAA
AATGGAACCT ACCTGCATTG 201 GGACAAATTC CGCCGGATTC ACACGGAAGA
TACGCGGATG AAATGGCGCG 251 CCGTTAAGGA AAGCCGCAAA AAAATCCAAA
AACCAATTGA TTTCCCGTTT 301 GAACATCAGT TTTGGTTCTG CATTCCCGAC
TCTTTGCAGG CACGGCTTCA 351 TTTGATTGAC AAAAGCTGCG GCAGTTCTAT
CGGCACGTCT AGCTTGGGTG 401 GCTTCGGCAG AAGCGAGCAA AACAGATTCT
TGCTCAAGTC TCTGATTATG 451 GAAGAAGCGA TTACATCCGC CCAACTGGAA
GGTGCGGCTA CCACGCGTAA 501 AGTGGCCAAG GATATGCTCA AATCGCAGCG
TAAACCCAAA ACAAAAGACG 551 AAATCATGAT AGTGAACAAC TATCACTTGA
TGAAAAAAGC GGTAGAATTG 601 AAAAATACGC CGTTAAGTGT TGAAATGATT
TTGGATTTGC ACCGCATTGC 651 TACCAGTAAC GCTATTGAAA ACAAGGCCGA
GCCCGGACAA TTCAGGCAGG 701 ATGACGAAAT CTTTATCGCC GATATCAATG
GTAACAGCCT GTATCAACCA 751 CCGCCGCACG GACAGGTTCA TACGCTGATG
GAAGAGGTGT GTGCGTTTGC 801 CAATAATACC TATGACGGCG TGGAAAATCC
GTTTATCCAT CCGGTTGTCC 851 AAGCTATTAT CTTGCATTTC CTCATCGGCT
ACATCCACCC ATTTGGTGAT 901 GGCAACGGGC GGACAGCGCG GGCTTTGTTC
TATTGGTTTA TGCTCAAAAA 951 CGGCTACTGG CTATTTGAAT ACATATCCAT
CAGCCGTCTT CTGAAAAACG 1001 CTCCTGCCCA ATACGCCAAA TCCTATTTGT
ATGCGGAAAC TGACGATTTA 1051 GATTTAACCT ATTTCATCTA TTACCAATGC
GATATTATCA AGCGGGCGGT 1101 TGCCGATTTG GAGCACTACA TTTCCGACAA
ACAAAAACAC CAACAGGAAT 1151 TCAAAGCAGC GATTGCCCAA TATACTGAAA
AGATAGGAAA GTTGAACCAA 1201 CGGCAAATTG GTATCCTGCA AAAAGCAGTG
GAAGAAAGCG GAAAAATCTT 1251 TACTGCACAA GAAATTGCCA ACCAATACGG
CATCTCCCTG AATACTGCCC 1301 GTAGCGATTT GAGTAAACTG GGAGAATATA
GATTCCTAGT GCCGTTCAAA 1351 TCAGGAAATG CTTTAGAGTA TGTTGCTCCT
CAGGATTTAT TGGAAAGGTT 1401 AGAAAAAAAA TAG
This corresponds to the amino acid sequence <SEQ ID 2582; ORF
752>:
TABLE-US-03041 m752.pep 1 MKISRPPEFT LLQQEYMQHL TERMTQIAKL
LNSSANNPDI DIPDFLTEIK 51 DYSEFSVTDE NGTYLHWDKF RRIHTEDTRM
KWRAVKESRK KIQKPIDFPF 101 EHQFWFCIPD SLQARLHLID KSCGSSIGTS
SLGGFGRSEQ NRFLLKSLIM 151 EEAITSAQLE GAATTRKVAK DMLKSQRKPK
TKDEIMIVNN YHLMKKAVEL 201 KNTPLSVEMI LDLHRIATSN AIENKAEPGQ
FRQDDEIFIA DINGNSLYQP 251 PPHGQVHTLM EEVCAFANNT YDGVENPFIH
PVVQAIILHF LIGYIHPFGD 301 GNGRTARALF YWFMLKNGYW LFEYISISRL
LKNAPAQYAK SYLYAETDDL 351 DLTYFIYYQC DIIKRAVADL EHYISDKQKH
QQEFKAAIAQ YTEKIGKLNQ 401 RQIGILQKAV EESGKIFTAQ EIANQYGISL
NTARSDLSKL GEYRFLVPFK 451 SGNALEYVAP QDLLERLEKK *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2583>:
TABLE-US-03042 m752-1.seq 1 ATGAAAATTT CCAGACCTCC GGAATTTACC
CTGTTGCAAC AGGAATATAT 51 GCAGCATCTC ACTGAAAGAA TGACGCAAAT
TGCCAAGCTG CTGAATTCTT 101 CCGCAAACAA TCCTGATATA GACATTCCCG
ATTTTCTTAC TGAAATCAAA 151 GATTATTCAG AATTTTCCGT GACAGATGAA
AATGGAACCT ACCTGCATTG 201 GGACAAATTC CGCCGGATTC ACACGGAAGA
TACGCGGATG AAATGGCGCG 251 CCGTTAAGGA AAGCCGCAAA AAAATCCAAA
AACCAATTGA TTTCCCGTTT 301 GAACATCAGT TTTGGTTCTG CATTCCCGAC
TCTTTGCAGG CACGGCTTCA 351 TTTGATTGAC AAAAGCTGCG GCAGTTCTAT
CGGCACGTCT AGCTTGGGTG 401 GCTTCGGCAG AAGCGAGCAA AACAGATTCT
TGCTCAAGTC TCTGATTATG 451 GAAGAAGCGA TTACATCCGC CCAACTGGAA
GGTGCGGCTA CCACGCGTAA 501 AGTGGCCAAG GATATGCTCA AATCGCAGCG
TAAACCCAAA ACAAAAGACG 551 AAATCATGAT AGTGAACAAC TATCACTTGA
TGAAAAAAGC GGTAGAATTG 601 AAAAATACGC CGTTAAGTGT TGAAATGATT
TTGGATTTGC ACCGCATTGC 651 TACCAGTAAC GCTATTGAAA ACAAGGCCGA
GCCCGGACAA TTCAGGCAGG 701 ATGACGAAAT CTTTATCGCC GATATCAATG
GTAACAGCCT GTATCAACCA 751 CCGCCGCACG GACAGGTTCA TACGCTGATG
GAAGAGGTGT GTGCGTTTGC 801 CAATAATACC TATGACGGCG TGGAAAATCC
GTTTATCCAT CCGGTTGTCC 851 AAGCTATTAT CTTGCATTTC CTCATCGGCT
ACATCCACCC ATTTGGTGAT 901 GGCAACGGGC GGACAGCGCG GGCTTTGTTC
TATTGGTTTA TGCTCAAAAA 951 CGGCTACTGG CTATTTGAAT ACATATCCAT
CAGCCGTCTT CTGAAAAACG 1001 CTCCTGCCCA ATACGCCAAA TCCTATTTGT
ATGCGGAAAC TGACGATTTA 1051 GATTTAACCT ATTTCATCTA TTACCAATGC
GATATTATCA AGCGGGCGGT 1101 TGCCGATTTG GAGCACTACA TTTCCGACAA
ACAAAAACAC CAACAGGAAT 1151 TCAAAGCAGC GATTGCCCAA TATACTGAAA
AGATAGGAAA GTTGAACCAA 1201 CGGCAAATTG GTATCCTGCA AAAAGCAGTG
GAAGAAAGCG GAAAAATCTT 1251 TACTGCACAA GAAATTGCCA ACCAATACGG
CATCTCCCTG AATACTGCCC 1301 GTAGCGATTT GAGTAAACTG GGAGAATATA
GATTCCTAGT GCCGTTCAAA 1351 TCAGGAAATG CTTTAGAGTA TGTTGCTCCT
CAGGATTTAT TGGAAAGGTT 1401 AGAAAAAAAA TAG
This corresponds to the amino acid sequence <SEQ ID 2584; ORF
752-1>:
TABLE-US-03043 m752-1.pep 1 MKISRPPEFT LLQQEYMQHL TERMTQIAKL
LNSSANNPDI DIPDFLTEIK 51 DYSEFSVTDE NGTYLHWDKF RRIHTEDTRM
KWRAVKESRK KIQKPIDFPF 101 EHQFWFCIPD SLQARLHLID KSCGSSIGTS
SLGGFGRSEQ NRFLLKSLIM 151 EEAITSAQLE GAATTRKVAK DMLKSQRKPK
TKDEIMIVNN YHLMKKAVEL 201 KNTPLSVEMI LDLHRIATSN AIENKAEPGQ
FRQDDEIFIA DINGNSLYQP 251 PPHGQVHTLM EEVCAFANNT YDGVENPFIH
PVVQAIILHF LIGYIHPFGD 301 GNGRTARALF YWFMLKNGYW LFEYISISRL
LKNAPAQYAK SYLYAETDDL 351 DLTYFIYYQC DIIKRAVADL EHYISDKQKH
QQEFKAAIAQ YTEKIGKLNQ 401 RQIGILQKAV EESGKIFTAQ EIANQYGISL
NTARSDLSKL GEYRFLVPFK 451 SGNALEYVAP QDLLERLEKK *
[0390] a752.seq not found yet
[0391] a752.pep not found yet
[0392] g753.seq not found yet
[0393] g753.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2585>:
TABLE-US-03044 m753.seq 1 ATGCCCATCA CTCCACCCTT AAACATCATC
TCTCCTAAAC TCTACCCCAA 51 TGAACAATGG AACGAAAGCG AAGCACTCGG
TGCCATCACT TGGCTATGGT 101 ATCAGTCGCC TACGCATCGC CAAGTACCTA
TTGTGGAGAT GATGACGTAT 151 ATATTGCCTG TGTTAAAAAA CGGGCAGTTC
GCTTTGTTTT GCAAGGGTAC 201 CCAACCAATC GGTTATATCT CATGGGCTTA
TTTTGATGAA GTGGCGCAGG 251 CGCATTATTT AGAATCTGAC CGCCATTTGC
GTGACAACAG CGATTGGAAC 301 TGTGGCGACA ATATTTGGCT GATTCAATGG
TTTGCGCCAT TGGGACACAG 351 TCATCAAATG CGCTCAGCTG TGCGCCAGTT
ATTTCCTAGT ACGACAGTAC 401 GCGCCTTGTA TCATAAAGGG AGCGATAAGG
GTTTGAGAAT TTTAACTTTT 451 AAAACTTGA
This corresponds to the amino acid sequence <SEQ ID 2586; ORF
753>:
TABLE-US-03045 m753.pep 1 MPITPPLNII SPKLYPNEQW NESEALGAIT
WLWYQSPTHR QVPIVEMMTY 51 ILPVLKNGQF ALFCKGTQPI GYISWAYFDE
VAQAHYLESD RHLRDNSDWN 101 CGDNIWLIQW FAPLGHSHQM RSAVRQLFPS
TTVRALYHKG SDKGLRILTF 151 KT*
[0394] a753.seq not found yet
[0395] a753.pep not found yet
[0396] g754.seq not found yet
[0397] g754.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2587>:
TABLE-US-03046 m754.seq 1 ATGATGAAGT CTATCCTCAC CGTATCCGGA
AATCGTATGC GTAAACCCAG 51 AATCACCTAT TTGGATGTTT GGGCAAACGA
TGAAAGAATC GGTACTTTGG 101 AAAAGGGGGC CATGTATCGG TTCGCATACG
ACAATCCCAA TTCTTCGTTG 151 CTGGGCCTGC ATTATCAAGA CAGAAGCAAG
GTATATATCA GCAACAATAT 201 GCCGCATATC TTTGCACAGT ATTTTCCGGA
AGGCTTTTTG GATGCACACA 251 TCACAAGCAA ATATGCTTTT CATGATGCGC
CTTTTGAAGA CAATGAGATG 301 CTGCGCTTGG CAATTCTGTG CAGAGAGACT
TTGGGTCGGA TACATGTGCG 351 CTGTAATGAC CCGCTTTTTA ATGAATGGAT
TGACGGGTTG GAGATGAAAA 401 ATCCAAGAAT ATTGACTGAA CGGGATTTGC
TGGGCATAAA TGCCCGACAG 451 GTTTTTCAGC AATATATGGC AGAAATCTTC
CATCACGGCC GTTTCGTCAG 501 TGTATCCGGG ATACAGCAGA AGATGTCCTT
AGATGCCATC CGCAGAAATA 551 CCAAGCAAAC TGCCTCATAT ATTGCCAAAG
GTTTTGATGC ATCCGAATAT 601 CCTTGCTTGG CTGCCAATGA ATTTTTATGC
ATGCAGACCA TCAAACAAGC 651 CGGCATTGCC GTTGCACAGA CCAGCCTGTC
GGAAGATTCA TCAGTCTTAT 701 TGGTACGTCG GTTTGATGTC AGTGAACAGG
GTTATTTTTT AGGGATGGAA 751 GACTTTACCA GTCTGCGCCA GTATTCGGTA
GAAGATAAAT ATAAAGGCAG 801 TTATGCGGCT ATTGCACAGA TTATCCGACA
GATATCCGGC AGACCAGATG 851 AAGATTTAAT CCATTTCTTT AATCAGCTTG
CTGCCAGTTG CATATTGAAA 901 AACGGCGATG CACACCTCAA AAATTTTTCA
GTACTCTATC ATGACGAATA 951 CGATGTTCGT CTTGCACCTG TCTATGATGT
ATTGGATACA TCAATATACA 1001 GGGTTGGAAC ACAAGGAATT TTTGATGCTT
ATGACGATAC GCTGGCATTA 1051 AACCTGACTA ACCACGGTAA GAAAACATAT
CCTTCCAAGA ATACATTGTT 1101 GGATTTTGCT GAGAAATATT GCGATTTGGG
AAGAGAAGAT GCATCCTTTA 1151 TGATAGATAC AATCGTTCAA GCTAAAGAAC
AGGTTCTTGT TAAATACTCG 1201 GATGTATTGC GTGAGAATGA ATGGTTGGCG
CAGAAGTGGC ATTTTATCCC 1251 GGATGAAAAT GAAGAAGGTC TACCGTTTAC
ATTCCGGTAG
This corresponds to the amino acid sequence <SEQ ID 2588; ORF
754>:
TABLE-US-03047 m754.pep 1 MMKSILTVSG NRMRKPRITY LDVWANDERI
GTLEKGAMYR FAYDNPNSSL 51 LGLHYQDRSK VYISNNMPHI FAQYFPEGFL
DAHITSKYAF HDAPFEDNEM 101 LRLAILCRET LGRIHVRCND PLFNEWIDGL
EMKNPRILTE RDLLGINARQ 151 VFQQYMAEIF HHGRFVSVSG IQQKMSLDAI
RRNTKQTASY IAKGFDASEY 201 PCLAANEFLC MQTIKQAGIA VAQTSLSEDS
SVLLVRRFDV SEQGYFLGME 251 DFTSLRQYSV EDKYKGSYAA IAQIIRQISG
RPDEDLIHFF NQLAASCILK 301 NGDAHLKNFS VLYHDEYDVR LAPVYDVLDT
SIYRVGTQGI FDAYDDTLAL 351 NLTNHGKKTY PSKNTLLDFA EKYCDLGRED
ASFMIDTIVQ AKEQVLVKYS 401 DVLRENEWLA QKWHFIPDEN EEGLPFTFR*
[0398] a754.seq not found yet
[0399] a754.pep not found yet
[0400] g755.seq not found yet
[0401] g755.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2589>:
TABLE-US-03048 m755.seq.. 1 ATGAGCCGTT ACCTGATTAC CTTTGATATG
GATACCAACT GCCTGAAAGA 51 CAATTACCAC GGAAATAACT ATACCAATGC
CTACTCCGAT ATTAAAACCA 101 TCTTGGCTAG ACATGGATTT GAGAACATTC
AGGGCAGTGT TTATCTAGGC 151 CGTGAAGGCA TCAGTGAAGC ACACGGAACA
ATAGCCATTC AGGAACTGAC 201 CGCTCGGTTT GATTGGTTTT ACTCCTGTAT
TTCAAACATT AAGTTTTACC 251 GCCTTGAAAG TGATTTGAAC GCACAATTTA
TCGCTGATGG TGTGTATCAA 301 GCCAAACAGG CTTTCCTTCA ACGTGTTGAA
CAACTTCGTA TATCCCTAAC 351 AGAAGCTGGA TTGTCTGATG AGCAAATCAA
TCAGGTTCTG GAAAAACAGA 401 AATTTGAATT GGAAAGTCCT AACCTGAAAT
TAAATTAA
This corresponds to the amino acid sequence <SEQ ID 2590; ORF
755>:
TABLE-US-03049 m755.pep.. 1 MSRYLITFDM DTNCLKDNYH GNNYTNAYSD
IKTILARHGF ENIQGSVYLG 51 REGISEAHGT IAIQELTARF DWFYSCISNI
KFYRLESDLN AQFIADGVYQ 101 AKQAFLQRVE QLRISLTEAG LSDEQINQVL
EKQKFELESP NLKLN*
[0402] a755.seq not found yet
[0403] a755.pep not found yet
[0404] g756.seq not found yet
[0405] g756.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2591>:
TABLE-US-03050 m756.seq 1 ATGACCGCCA ACTTTGCACA GACGCTGGTC
GAAATACAGG ACAGTCTGTA 51 CAGGGTTGTG TCAACCGTCC AATACGGGGA
TGACAACCTC AAGCGGTTGA 101 CAGCGGACAA ACGGAAGCAG TATGAGTTGA
ACTTCAAGAT TTCCGAGGGT 151 TCTACGCGTG TAGAGTCCGA CTTTAAAGAG
ACTTTGGTTC GGTTCGGTAG 201 AGATATGCTT CAAGATATGC CCCCTAAAAT
CCGTTCGGCA ACGCTGGTAG 251 CGTTGACGAC CCTGCTTGTC GGAGGGGCGT
TGGGTTACGG TTATTTGGAA 301 TACCTGAAGC AGGTTGCTTC GGAAGGGTAT
CAGACCGAGC GTCTGTATAA 351 TGCCGTCGAC CGTCTTGCAG AATCCCAAGA
ACGGATAACG TCCGCCATCC 401 TGAAGGGTGC TAGAGGTGCC GATTTCGTGC
AAATCGGCAG ACGTTCCTAC 451 AGTAGGGAGG ATATATCGGA GGCAAATAGA
CGTGCAGAGC GTGTCCCGTA 501 TGGCGCAGAG TTGGTTTCAG ACGGCAATTT
TACCGCTGTT TTATCTGATA 551 TAGGGGATTA A
This corresponds to the amino acid sequence <SEQ ID 2592; ORF
756>:
TABLE-US-03051 m756.pep 1 MTANFAQTLV EIQDSLYRVV STVQYGDDNL
KRLTADKRKQ YELNFKISEG 51 STRVESDFKE TLVRFGRDML QDMPPKIRSA
TLVALTTLLV GGALGYGYLE 101 YLKQVASEGY QTERLYNAVD RLAESQERIT
SAILKGARGA DFVQIGRRSY 151 SREDISEANR RAERVPYGAE LVSDGNFTAV
LSDIGD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2593>:
TABLE-US-03052 a756.seq 1 ATGACCGCCA ACTTTGCACA GACGCTGGTC
GAAATACAGG ACAGTCTGTA 51 NAGGGTTGTG TCAACCGTCC AATACGGGGA
TGACAACCTC AAGCGGTTGA 101 CAGCGGACAA ACGGAAGCAG TATGAGTTGA
ACTTCAAGAT TTCCGAGGGT 151 TCTACGCGTG TAGAGTCCGA CTTTAAAGAG
ACTTTGGTTC GGTTCGGTAG 201 AGATATGCTT CAAGATATGC CCCCTAAAAT
CCGTTCGGCA ACGCTGGTAG 251 CGTTGACGAC CCTGCTTGTC GGAGGGGCGT
TGGGTTACGG TTATTTGGAA 301 TACCTGAAGC AGGTTGCTTC GGAAGGGTAT
CAGACCGAGC GTCTGTATAA 351 TGCCGTCGAC CGTCTTGCAG AATCCCAAGA
ACGGATAACG TCCGCCATCC 401 TGAAGGGTGC TAGAGGTGCC GATTTCGTGC
AAATCGGCAG ACGTTCCTAC 451 AGTAGGGAGG ATATATCGGA GGCAAATAGA
CGTGCAGAGC GTGTCCCGTA 501 TGGCGCAGAG TTGGTTTCAG ACGGCAATTT
TACCGCTGTT TTATCTGATA 551 TAGGGGATTA A
This corresponds to the amino acid sequence <SEQ ID 2594; ORF
756.a>:
TABLE-US-03053 a756.pep 1 MTANFAQTLV EIQDSLXRVV STVQYGDDNL
KRLTADKRKQ YELNFKISEG 51 STRVESDFKE TLVRFGRDML QDMPPKIRSA
TLVALTTLLV GGALGYGYLE 101 YLKQVASEGY QTERLYNAVD RLAESQERIT
SAILKGARGA DFVQIGRRSY 151 SREDISEANR RAERVPYGAE LVSDGNFTAV LSDIGD*
m756/a756 99.5% identity in 186 aa overlap 10 20 30 40 50 60
m756.pep
MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELNFKISEGSTRVESDFKE
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| a756
MTANFAQTLVEIQDSLXRVVSTVQYGDDNLKRLTADKRKQYELNFKISEGSTRVESDFKE 10 20
30 40 50 60 70 80 90 100 110 120 m756.pep
TLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYLKQVASEGYQTERLYNAVD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a756
TLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYLKQVASEGYQTERLYNAVD 70 80
90 100 110 120 130 140 150 160 170 180 m756.pep
RLAESQERITSAILKGARGADFVQIGRRSYSREDISEANRRAERVPYGAELVSDGNFTAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a756
RLAESQERITSAILKGARGADFVQIGRRSYSREDISEANRRAERVPYGAELVSDGNFTAV 130
140 150 160 170 180 m756.pep LSDIGDX ||||||| a756 LSDIGDX
[0406] g757.seq not found yet
[0407] g757.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2595>:
TABLE-US-03054 m757.seq 1 ATGAAAATAC TCGCTTTATT AATTGCCGCT
ACCTGTGCTT TATCTGCGTG 51 TGGCAGCCAA TCTGAAGAAC AACCGGCATC
TGCACAACCC CAAGAGCAGG 101 CACAATCCGA ATTAAAAACC ATGCCGGTAA
GCTATACCGA CTATCAATCA 151 GCAGCCAATA AAGGGCTGAA TGACCAAAAA
ACCGGTCTGA CCCTTCCTGA 201 ACATGTTGTC CCTATCGACA ATGCGGAAGG
AAAGAATCTG CTGCATGACT 251 TTTCAGACGG CCTCACAATC TTAACCGTTG
ATACCGATAA AGCCGACAAA 301 ATTACTGCTG TCCGAGTAGT CTGGAATACA
GATGCAATGC CTCAAAAAGC 351 GGAAAAACTG TCCAAAGCTG CCGCAGCCTT
GATTGCGGCA ACCGCTCCGG 401 AAGACCGCAC AATGCTGCGT GATACCGGCG
ACCAAATCGA AATGGCGATT 451 GACAGCCATA ATGCGCAAAA AGAGCCAACC
CGAGAATGGG CGCGTGGTGG 501 GATTGCTTAT AAAGTCACTG TTACCAATTT
ACCGAGCGTG GTTTTGACGG 551 CAAAAGCTGA GTAA
This corresponds to the amino acid sequence <SEQ ID 2596; ORF
757>:
TABLE-US-03055 m757.pep (lipoprotein) 1 MKILALLIAA TCALSACGSQ
SEEQPASAQP QEQAQSELKT MPVSYTDYQS 51 AANKGLNDQK TGLTLPEHVV
PIDNAEGKNL LHDFSDGLTI LTVDTDKADK 101 ITAVRVVWNT DAMPQKAEKL
SKAAAALIAA TAPEDRTMLR DTGDQIEMAI 151 DSHNAQKEPT REWARGGIAY
KVTVTNLPSV VLTAKAE*
[0408] a757.seq not found yet
[0409] a757.pep not found yet
[0410] g758.seq not found yet
[0411] g758.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2597>:
TABLE-US-03056 m758.seq 1 ATGAACAATC TGACCGTGTT TACCCGTTTC
GATACCGATT TGGCGACGCT 51 TGCCGATGAA TTGCAATATG TGTGGGAACA
CACCGCCGTT ACAGACCATC 101 AGGGCAAACT GGTGGAAATT CCCGTCTGCT
ACGGCGGCGA ATACGGCCCG 151 GATTTGGCGG AAGTCGCTGC TTTCCATCAG
ACGGTTATTT CCGAAATCGT 201 CCGCCGCCAT ACGGCGCAAA CTTATACCGT
ATTTATGATG GGCTTCCAGC 251 CCGGTTTCCC TTATCTGGGC GGCTTGCCCG
AAGCATTGCA CACGCCCCGC 301 CGTGCCGTGC CGAGAACGTC CGTTCCTGCC
GGTTCGGTCG GTATCGGCGG 351 CAGTCAGACC GGTGTGTATC CGTTCGCTTC
GCCCGGCGGC TGGCAGATTA 401 TCGGCAGAAC CGAATTACCC TTGTTCCGAG
CCGATTTGAA TCCGCCGACC 451 CTGCTGGCGG CGGGTGACCA AGTCCGCTTT
GTTGCAGAAA GGATTGAGCC 501 ATGA
This corresponds to the amino acid sequence <SEQ ID 2598; ORF
758>:
TABLE-US-03057 m758.pep 1 MNNLTVFTRF DTDLATLADE LQYVWEHTAV
TDHQGKLVEI PVCYGGEYGP 51 DLAEVAAFHQ TVISEIVRRH TAQTYTVFMM
GFQPGFPYLG GLPEALHTPR 101 RAVPRTSVPA GSVGIGGSQT GVYPFASPGG
WQIIGRTELP LFRADLNPPT 151 LLAAGDQVRF VAERIEP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2599>:
TABLE-US-03058 a758.seq 1 ATGAACAATC TGACCGTGTT CACCCGTTTC
GATACCGATT TGGCGACGCT 51 TGCCGATGAA TTGCAATATG TGTGGGAACA
CACCGCCGTT ACAGACCATC 101 AGGGCAAACT GGTGGAAATT CCCGTCTGCT
ACGGCGGCGA ATACGGCCCG 151 GATTTGGCGG AAGTCGCTGC TTTCCATCAG
ACGGTTATTT CCGAAATCGT 201 CCGCCGCCAT ACGGCGCAAA CTTATACCGT
ATTTATGATG GGCTTCCAGC 251 CTGGTTTCCC TTATCTGGGC GGCTTGCCCG
AAGCATTGCA CACGCCCCGC 301 CGTGCCGTGC CGAGAACGTC CGTTCCTGCC
GGTTCGGTCG GTATCGGCGG 351 CAGTCAGACC GGTGTGTATC CGTTCGCTTC
GCCCGGCGGC TGGCAGATTA 401 TCGGCAGAAC CGAATTACCC TTGTTCCGAG
CCGATTTGAA TCCGCCGACC 451 CTGCTGGCGG CGGGTGACCA AGTCCGCTTT
GTTGCAGAAA GGATTGAGCC 501 ATGA
This corresponds to the amino acid sequence <SEQ ID 2600; ORF
758.a>:
TABLE-US-03059 a758.pep.. 1 MNNLTVFTRF DTDLATLADE LQYVWEHTAV
TDHQGKLVEI PVCYGGEYGP 51 DLAEVAAFHQ TVISEIVRRH TAQTYTVFMM
GFQPGFPYLG GLPEALHTPR 101 RAVPRTSVPA GSVGIGGSQT GVYPFASPGG
WQIIGRTELP LFRADLNPPT 151 LLAAGDQVRF VAERIEP* m758/a758 100.0%
identity in 167 aa overlap 10 20 30 40 50 60 m758.pep
MNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAEVAAFHQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a758
MNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAEVAAFHQ 10 20
30 40 50 60 70 80 90 100 110 120 m758.pep
TVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGSVGIGGSQT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a758
TVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGSVGIGGSQT 70 80
90 100 110 120 130 140 150 160 m758.pep
GVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEPX
|||||||||||||||||||||||||||||||||||||||||||||||| a758
GVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEPX 130 140 150
160
[0412] g759.seq not found yet
[0413] g759.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2601>:
TABLE-US-03060 m759.seq 1 ATGCGCTTCA CACACACCAC CCCATTTTGT
TCCGTATTGT CCACCCTCGG 51 TCTTTTTGCC GTTTCCCCTG CTTACTCATC
CATTGTCCGC AACGATGTCG 101 ATTACCAATA TTTTCGCGAC TTTGCCGAAA
ATAAAGGCGC GTTCACCGTA 151 GGTGCAAGCA ATATTTCCAT CCAAGACAAG
CAAGGCAAAA TATTAGGCAG 201 GGTTCTCAAC GGCATCCCCA TGCCCGACTT
CCGCGTCAGC AACCGCCAAA 251 CCGCCATCGC CACCCTGGTT CACCCCCAAT
ACGTCAACAG TGTCAAACAC 301 AACGTCGGCT ACGGTTCCAT ACAATTCGGC
AACGACACCC AAAATCCAGA 351 AGAACAAGCC TATACCTACC GCCTCGTATC
ACGCAACCCG CACCCGGACT 401 ACGACTACCA CCTTCCCCGC CTCAACAAAC
TGGTTACCGA AATCTCACCT 451 ACCGCACTCA GCAGCGTACC CTTGCTTGGA
AACGGCCAGC CAAAGGCCAA 501 TGCCTACCTC GATACCGACC GCTTCCCCTA
CTTTGTACGA CTCGGCTCAG 551 GCACGCAACA AGTCCGCAAA GCAGACGGCA
CGCGTACACG AACCGCCCCG 601 GCATACCAAT ACCTGACCGG CGGCACGCCG
CTGAAAGTAT TGGGGTTCCA 651 AAACCACGGC TTACTCGTCG GCGGCAGCCT
GACCGACCAA CCCCTTAACA 701 CCTACGCAAT CGCCGGAGAC AGCGGTTCCC
CCCTGTTTGC CTTCGACAAG 751 CATGAAAACC GCTGGGTGCT TGCGGGCGTA
CTCAGCACCT ACGCCGGCTT 801 CGATAATTTC TTCAACAAAT ACATCGTCAC
GCAACCCGAA TTCATCCGTT 851 CCACCATCCG CCAATACGAA ACCCGGCTGG
ATGTCGGGCT GACCACCAAC 901 GAACTCATAT GGCGCGACAA CGGTAATGGC
AACAGCACCC TGCAAGGGCT 951 CAACGAACGC ATCACCCTGC CCATTGCAAA
CCCTTCGCTT GCCCCACAAA 1001 ACGACAGCAG GCACATGCCG TCTGAAGATG
CCGGCAAAAC GCTCATCCTA 1051 TCCAGCAGGT TCGACAACAA AACACTGATG
CTGGCAGACA ATATCAACCA 1101 AGGCGCAGGC GCATTGCAGT TCGACAGCAA
CTTCACCGTC GTCGGTAAAA 1151 ACCACACATG GCAAGGTGCA GGCGTTATCG
TAGCCGACGG CAAACGCGTC 1201 TTCTGGCAAG TCAGCAACCC CAAAGGCGAC
CGGCTCTCCA AACTGGGCGC 1251 AGGCACGCTT ATCGCCAACG GACAAGGCAT
CAACCAGGGC GACATCAGCA 1301 TCGGGGAAGG CACTGTCGTA CTCGCCCAAA
AAGCTGCTTC AGACGGCAGC 1351 AAACAAGCAT TCAACCAAGT CGGCATCACC
AGCGGCAGGG GCACGGCCGT 1401 CCTCGCCGAC AGCCAGCAAA TCAAACCCGA
AAACCTCTAT TTCGGCTTCA 1451 GGGGCGGACG GCTCGACCTC AACGGCAACA
ACCTTGCCTT TACCCATATC 1501 CGCCATGCGG ACGGCGGCGC GCAAATCGTC
AATCACAACC CTGACCAAGC 1551 CGCGACACTG ACGCTGACCG GCAACCCCGT
CCTCAGTCCC GAGCATGTCG 1601 AGTGGGTGCA ATGGGGCAAC CGTCCGCAAG
GCAACGCGGC GGTTTACGAA 1651 TACATCAACC CGCACCGCAA CCGTCGGACC
GACTACTTCA TACTCAAACC 1701 CGGCGGCAAC CCGCGCGAAT TTTTCCCGTT
AAATATGAAA AACTCAACAA 1751 GCTGGCAATT TATCGGCAAC AACAGGCAAC
AGGCCGCCGA ACAAGTCGCC 1801 CAAGCCGAAA ATGCCCGCCC CGACCTGATT
ACCTTCGGCG GATACTTGGG 1851 TGAAAACGCG CAAACGGGCA AAGCCGCGCC
GAGTTACAGC AAAACCAATG 1901 AAGCAGCCAT AGAAAAAACC CGCCATATCG
CAAATGCCGC CGTATACGGC 1951 CGGCCCGAAT ACCGTTACAA CGGCGCACTC
AACCTGCACT ATCGTCCCAA 2001 ACGCACCGAC AGCACGCTGT TGCTCAACGG
CGGCATGAAC CTTAACGGGG 2051 AAGTCTTGAT TGAGGGCGGC AATATGATTG
TGTCAGGCAG GCCCGTACCC 2101 CATGCCTACG ACCACCAGGC CAAACGCGAA
CCCGTTCTTG AAAACGAATG 2151 GACCGACGGC AGCTTCAAGG CTGCACGGTT
CACCCTGCGA AACCATGCCC 2201 GACTGACGGC AGGGCGCAAT ACCGCGCATC
TGGACGGCGA CATAACCGCA 2251 TACGATCTGT CCGGCATCGA CCTCGGCTTT
ACCCAAGGCA AAACACCGGA 2301 ATGCTACCGC TCCTACCATA GCGGCAGCAC
CCACTGCACA CCCAACGCCG 2351 TTTTAAAAGC CGAAAACTAT CGTGCACTAC
CTGCAACGCA AGTACGCGGC 2401 GACATTACCC TTAACGACCG TTCAGAGCTC
CGCCTGGGCA AAGCACACCT 2451 GTACGGCAGC ATCCGTGCCG GCAAAGACAC
CGCAGTCCGC ATGGAAGCAG 2501 ACAGCAACTG GACACTTTCC CAGTCCAGCC
ACACCGGCGC ACTGACGCTT 2551 GACGGCGCAC AAATTACCCT GAACCCCGAT
TTCGCCAATA ATACACACAA 2601 CAACCGCTTC AACACACTGA CCGTCAACGG
CACACTTGAC GGGTTCGGCA 2651 CATTCCGATT CCTGACCGGC ATCGTCCGAA
AACAAAATGC CCCCCCCCTC 2701 AAACTGGAAG GGGACAGCCG CGGCGCATTC
CAAATCCACG TCAAAAACAC 2751 CGGACAAGAA CCTCAAACAA CCGAATCGCT
TGCACTTGTG AGCCTCAATC 2801 CGAAACACAG CCACCAAGCC CGATTCACCC
TCCAAAACGG CTATGCCGAT 2851 TTGGGTGCCT ACCGCTACAT CCTCCGCAAA
AACAACAACG GATACAGCCT 2901 GTACAACCCG CTCAAAGAGG CCGAACTTCA
AATTGAAGCC ACGCGTGCGG 2951 AACATGAGCG CAACCAACAG GCATACAACC
AATTACAGGC AACCGACATC 3001 AGCAGACAGG TTCAACATGA CTCTGACGCG
ACCAGGCAGG CACTACAGGC 3051 CTGGCAGAAC AGTCAAACCG AACTTGCCCG
CATCGACAGC CAAGTCCAAT 3101 ATCTGTCCGC CCAATTGAAA CAGACAGACC
CGCTGACCGG CATTCTGACG 3151 CGTGCCCAAA ACCTGTGTGC CGCACAAGGA
TACAGTGCCG ATATCTGCCG 3201 TCAGGTTGCC AAAGCCGCCG ACACGAACGA
CCTGACACTC TTCGAAACCG 3251 AACTGGATAC GTATATAGAA CGTGTAGAAA
TGGCCGAATC CGAACTTGAC 3301 AAAGCACGGC AAGGCGGCGA TGCGCAAGCC
GTCGAAACAG CCCGGCACGC 3351 CTACCTGAAC GCACTCAACC GTCTGTCCCG
ACAAATCCAC AGTTTGAAAA 3401 CCGGCGTTGC CGGCATCCGT ATGCCGAACC
TGGCCGAACT GATCAGCCGG 3451 TCGGCCAACA CCGCCGTTTC CGAACAGGCC
GCCTACAATA CCGGCCGGCA 3501 ACAGGCGGGA CGCCGCATCG ACCGCCACCT
TACCGATCCG CAGCAGCAAA 3551 ACATCTGGCT GGAAACCGGT ACGCAACAAA
CCGACTACCA TAGCGGCACA 3601 CACCGTCCCT ACCAACAAAC TACCAACTAT
GCACATATCG GCATCCAAAC 3651 CGGCATCACC GACCGTCTCA GTGTCGGTAC
GATTTTAACC GATGAGCGCA 3701 CAAACAACCG TTTTGATGAA GGCGTATCCG
CCCGAAACCG CAGCAACGGC 3751 GCACATCTGT TCGTCAAAGG GGAAAACGGC
GCACTCTTTG CCGCGGCAGA 3801 TTTAGGCTAC AGCAACAGCC GTACCCGATT
TACCGATTAT GACGGGGCTG 3851 CCGTCCGCCG CCACGCATGG GATGCAGGCA
TCAACACCGG CATCAAAATC 3901 GATACCGGCA TCAACCTCAG ACCCTATGCC
GGCATCCGTA TAAACCGCAG 3951 CAACGGCAAC CGGTACGTAC TCGACGGCGC
AGAGATAAAC AGCCCGGCGC 4001 AAATCCAAAC CACATGGCAT GCCGGCATCC
GTCTCGATAA AACCGTCGAA 4051 CTGGGTCAAG CCAAGCTGAC CCCCGCCTTC
AGCAGCGATT ACTACCATAC 4101 CCGCCAAAAC AGCGGTTCCG CCCTCAGCGT
CAACGACCGT ACCTTACTGC 4151 AGCAAGCCGC CCACGGCACA CTGCATACCC
TGCAAATCGA CGCCGGATAC 4201 AAAGGCTGGA ACGCCAAACT TCATGCCGCT
TACGGCAAAG ACAGCAACAC 4251 CGCCCGCCAC AAACAGGCAG GAATCAAAAT
AGGCTACAAC TGGTAA
This corresponds to the amino acid sequence <SEQ ID 2602; ORF
759>:
TABLE-US-03061 m759.pep 1 MRFTHTTPFC SVLSTLGLFA VSPAYSSIVR
NDVDYQYFRD FAENKGAFTV 51 GASNISIQDK QGKILGRVLN GIPMPDFRVS
NRQTAIATLV HPQYVNSVKH 101 NVGYGSIQFG NDTQNPEEQA YTYRLVSRNP
HPDYDYHLPR LNKLVTEISP 151 TALSSVPLLG NGQPKANAYL DTDRFPYFVR
LGSGTQQVRK ADGTRTRTAP 201 AYQYLTGGTP LKVLGFQNHG LLVGGSLTDQ
PLNTYAIAGD SGSPLFAFDK 251 HENRWVLAGV LSTYAGFDNF FNKYIVTQPE
FIRSTIRQYE TRLDVGLTTN 301 ELIWRDNGNG NSTLQGLNER ITLPIANPSL
APQNDSRHMP SEDAGKTLIL 351 SSRFDNKTLM LADNINQGAG ALQFDSNFTV
VGKNHTWQGA GVIVADGKRV 401 FWQVSNPKGD RLSKLGAGTL IANGQGINQG
DISIGEGTVV LAQKAASDGS 451 KQAFNQVGIT SGRGTAVLAD SQQIKPENLY
FGFRGGRLDL NGNNLAFTHI 501 RHADGGAQIV NHNPDQAATL TLTGNPVLSP
EHVEWVQWGN RPQGNAAVYE 551 YINPHRNRRT DYFILKPGGN PREFFPLNMK
NSTSWQFIGN NRQQAAEQVA 601 QAENARPDLI TFGGYLGENA QTGKAAPSYS
KTNEAAIEKT RHIANAAVYG 651 RPEYRYNGAL NLHYRPKRTD STLLLNGGMN
LNGEVLIEGG NMIVSGRPVP 701 HAYDHQAKRE PVLENEWTDG SFKAARFTLR
NHARLTAGRN TAHLDGDITA 751 YDLSGIDLGF TQGKTPECYR SYHSGSTHCT
PNAVLKAENY RALPATQVRG 801 DITLNDRSEL RLGKAHLYGS IRAGKDTAVR
MEADSNWTLS QSSHTGALTL 851 DGAQITLNPD FANNTHNNRF NTLTVNGTLD
GFGTFRFLTG IVRKQNAPPL 901 KLEGDSRGAF QIHVKNTGQE PQTTESLALV
SLNPKHSHQA RFTLQNGYAD 951 LGAYRYILRK NNNGYSLYNP LKEAELQIEA
TRAEHERNQQ AYNQLQATDI 1001 SRQVQHDSDA TRQALQAWQN SQTELARIDS
QVQYLSAQLK QTDPLTGILT 1051 RAQNLCAAQG YSADICRQVA KAADTNDLTL
FETELDTYIE RVEMAESELD 1101 KARQGGDAQA VETARHAYLN ALNRLSRQIH
SLKTGVAGIR MPNLAELISR 1151 SANTAVSEQA AYNTGRQQAG RRIDRHLTDP
QQQNIWLETG TQQTDYHSGT 1201 HRPYQQTTNY AHIGIQTGIT DRLSVGTILT
DERTNNRFDE GVSARNRSNG 1251 AHLFVKGENG ALFAAADLGY SNSRTRFTDY
DGAAVRRHAW DAGINTGIKI 1301 DTGINLRPYA GIRINRSNGN RYVLDGAEIN
SPAQIQTTWH AGIRLDKTVE 1351 LGQAKLTPAF SSDYYHTRQN SGSALSVNDR
TLLQQAAHGT LHTLQIDAGY 1401 KGWNAKLHAA YGKDSNTARH KQAGIKIGYN W*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2603>:
TABLE-US-03062 g760.seq (partial) 1 AACAACCGCA ACACCCGTTA
CGCCGCATTG GGCAAACGCG TGATGGAAGG 51 CGTTGAGACC GAAATCAGCG
GTGCGATTAC ACCGAAATGG CAAATCCATG 101 CAGGTTACAG CTATCTGCAC
AGCCAAATCA AAACCGCCGC CAATCCACGC 151 GACGACGGCA TCTTCCTGCT
GGTGCCCAAA CACAGCGCAA ACCTGTGGAC 201 GACTTACCAA GTTACGCCCG
GGCTGACCGT CGGCGGCGGC GTGAACGCGA 251 TGAGCGGCAT TACTTCATCT
GCAGGGATGC ATGCAGGCGG TTATGCCACG 301 TTCGATGCGA TGGCGGCATA
CCGCTTCACG CCCAAGCTGA AGCTGCAAAT 351 CAATGCCGAC AACATCTTCA
ACCGCCATTA CTACGCCCGC GTCGGCGGCA 401 CGAACACCTT TAACATTCCC
GGTTCGGAGC GCAGCCTGAC GGCAAACCTG 451 CGTTACAGTT TTTAA
This corresponds to the amino acid sequence <SEQ ID 2604; ORF
760.ng>:
TABLE-US-03063 g760.pep (partial) 1 NNRNTRYAAL GKRVMEGVET
EISGAITPKW QIHAGYSYLH SQIKTAANPR 51 DDGIFLLVPK HSANLWTTYQ
VTPGLTVGGG VNAMSGITSS AGMHAGGYAT 101 FDAMAAYRFT PKLKLQINAD
NIFNRHYYAR VGGTNTFNIP GSERSLTANL 151 RYSF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2605>:
TABLE-US-03064 m760.seq 1 ATGGGACAGT TTATGTCAGT TTTCCGCATC
AATATGACCG CCGCCACGGT 51 TTTGGCAGCA CTCTCGTCTT CGGTTTTTGC
CGCACAAACG GAAGGTTTGG 101 AAACCGTCCA TATTAAGGGT CAGCGTTCTT
ACAACGCGAT TGCCACCGAG 151 AAAAACGGCG ATTACAGCTC GTTTGCCGCC
ACCGTCGGTA CAAAAATCCC 201 CGCTTCTTTG CGCGAAATTC CGCAATCCGT
CAGCATCATT ACCAACCAGC 251 AGGTCAAAGA CCGCAATGTT GATACGTTTG
ACCAGTTGGC ACGCAAAACG 301 CCCGGCCTGC GCGTGTTGAG CAACGACGAC
GGACGCTCTT CGGTTTACGC 351 GCGCGGTTAC GAATACAGCG AATACAACAT
CGACGGCCTG CCCGCGCAGA 401 TGCAGAGTAT CAACGGCACG CTGCCCAACC
TGTTCGCCTT CGACCGCGTG 451 GAAGTGATGC GCGGGCCGAG CGGACTGTTC
GACAGCAGCG GCGAGATGGG 501 CGGCATCGTG AATCTGGTGC GCAAACGCCC
GACCAAAGCG TTCCAAGGTC 551 ATGCGGCGGC AGGGTTCGGT ACGCACAAAC
AATATAAAGC CGAGGCGGAC 601 GTATCGGGCA GCCTCAATTC AGACGGCAGC
GTGCGCGGCC GCGTGATGGC 651 GCAGACCGTC GGCGCGTCTC CGCGTCCCGC
CGAGAAAAAC AACCGGCGCG 701 AAACCTTCTA CGCGGCGGCG GATTGGGACA
TCAACCCCGA TACGGTTTTG 751 GGCGCGGGCT ATCTTTACCA GCAACGCCGC
CTCGCGCCGT ACAACGGCCT 801 GCCTGCCGAT GCCAATAACA AATTACCGTC
CCTGCCGCAA CACGTATTTG 851 TCGGCGCGGA TTGGAACAAA TTTAAAATGC
ACAGCCACGA CGTGTTCGCC 901 GATTTGAAAC ATTACTTCGG CAACGGCGGC
TACGGCAAAG TCGGTATGCG 951 CTATTCCGAT CGGAAAGCCG ATTCCAATTA
TACGTTTGCG GGCAGCAAAC 1001 TCAACAATAC CGGACAAGCC GACGTAGCGG
GTTTGGGTAC GGACATTAAA 1051 CAAAAAGCCT TTGCGGTTGA CGCAAGTTAC
AGCCGTCCGT TTGCCTTGGG 1101 CAACACCGCC AACGAATTTG TGATTGGTGC
AGACTACAAC CGCTTGCGCA 1151 GTACTAATGA ACAAGGGCGT TCGACTTTGT
CAAAAAGCGT CGCTTTAGAT 1201 GGTTTCCGCG CTTTGCCTTA TAACGGCATA
CTTCAGAACG CCCGCGCCGG 1251 AAACAAAGGT TTCAATCACT CCGTTACCGA
AGAAAACCTC GACGAAACCG 1301 GTTTGTATGC CAAGACGGTG TTCCGTCCTC
TGGAAGGTTT GTCGTTGATT 1351 GCAGGCGGAC GTGTAGGACA TCACAAAATC
GAGTCGGGCG ACGGCAAAAC 1401 CCTGCATAAA GCTTCGAAAA CCAAATTTAC
AAGCTACGCC GGCGCGGTTT 1451 ACGATATAGA CGGCAGCAAC AGCCTGTACG
CTTCCGCCTC CCAACTCTAC 1501 ACACCGCAAA CCAGCATCGG CACCGACGGC
AAGCTGCTCA AACCGCGCGA 1551 AGGCAACCAG TTTGAAATCG GCTACAAAGG
CAGCTACATG GACGACCGCC 1601 TCAATACCCG GGTTTCGTTC TACCGCATGA
AGGATAAAAA CGCCGCCGCA 1651 CCGCTGGACT CAAACAACAA AAAAACCCGT
TACGCCGCAT TGGGCAAACG 1701 CGTGATGGAA GGTGTTGAGA CCGAAATCAG
CGGCGCGATG ACACCGAAAT 1751 GGCAAATCCA TGCAGGTTAC AGCTACCTGC
ACAGCCAAAT CAAAACCGCC 1801 TCCAATTCGC GCGACGAAGG CATCTTCCTG
CTGATGCCCA AACACAGCGC 1851 AAACCTGTGG ACGACTTACC AAGTTACGTC
CGGGCTGACC ATCGGCGGCG 1901 GCGTGAACGC GATGAGCGGC ATTACTTCAT
CTGCAGGGAT ACATGCAGGC 1951 GGTTATGCCA CGTTCGATGC GATGGCGGCA
TACCGCTTCA CGCCCAAACT 2001 GAAGCTGCAA ATCAACGCCG ACAACATCTT
CAACCGCCAT TACTACGCCC 2051 GCGTCGGCAG CGAGAGCACC TTTAACATTC
CCGGTTCGGA GCGCAGCCTG 2101 ACGGCAAACC TGCGTTACAG TTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2606; ORF
760>:
TABLE-US-03065 m760.pep 1 MGQFMSVFRI NMTAATVLAA LSSSVFAAQT
EGLETVHIKG QRSYNAIATE 51 KNGDYSSFAA TVGTKIPASL REIPQSVSII
TNQQVKDRNV DTFDQLARKT 101 PGLRVLSNDD GRSSVYARGY EYSEYNIDGL
PAQMQSINGT LPNLFAFDRV 151 EVMRGPSGLF DSSGEMGGIV NLVRKRPTKA
FQGHAAAGFG THKQYKAEAD 201 VSGSLNSDGS VRGRVMAQTV GASPRPAEKN
NRRETFYAAA DWDINPDTVL 251 GAGYLYQQRR LAPYNGLPAD ANNKLPSLPQ
HVFVGADWNK FKMHSHDVFA 301 DLKHYFGNGG YGKVGMRYSD RKADSNYTFA
GSKLNNTGQA DVAGLGTDIK 351 QKAFAVDASY SRPFALGNTA NEFVIGADYN
RLRSTNEQGR STLSKSVALD 401 GFRALPYNGI LQNARAGNKG FNHSVTEENL
DETGLYAKTV FRPLEGLSLI 451 AGGRVGHHKI ESGDGKTLHK ASKTKFTSYA
GAVYDIDGSN SLYASASQLY 501 TPQTSIGTDG KLLKPREGNQ FEIGYKGSYM
DDRLNTRVSF YRMKDKNAAA 551 PLDSNNKKTR YAALGKRVME GVETEISGAM
TPKWQIHAGY SYLHSQIKTA 601 SNSRDEGIFL LMPKHSANLW TTYQVTSGLT
IGGGVNAMSG ITSSAGIHAG 651 GYATFDAMAA YRFTPKLKLQ INADNIFNRH
YYARVGSEST FNIPGSERSL 701 TANLRYSF* m760/g760 91.6% identity in 154
aa overlap 530 540 550 560 570 580 m760.pep
YKGSYMDDRLNTRVSFYRMKDKNAAAPLDSNNKKTRYAALGKRVMEGVETEISGAMTPKW
||::|||||||||||||||||||||:|||| g760 NNRNTRYAALGKRVMEGVETEISGAITPKW
10 20 30 590 600 610 620 630 640 m760.pep
QIHAGYSYLHSQIKTASNSRDEGIFLLMPKHSANLWTTYQVTSGLTIGGGVNAMSGITSS
||||||||||||||||:| ||:|||||:|||||||||||||| |||:||||||||||||| g760
QIHAGYSYLHSQIKTAANPRDDGIFLLVPKHSANLWTTYQVTPGLTVGGGVNAMSGITSS 40 50
60 70 80 90 650 660 670 680 690 700 m760.pep
AGIHAGGYATFDAMAAYRFTPKLKLQINADNIFNRHYYARVGSESTFNIPGSERSLTANL
||:|||||||||||||||||||||||||||||||||||||||: :||||||||||||||| g760
AGMHAGGYATFDAMAAYRFTPKLKLQINADNIFNRHYYARVGGTNTFNIPGSERSLTANL 100
110 120 130 140 150 709 m760.pep RYSFX ||||| g760 RYSFX
[0414] g761.seq not found yet
[0415] g761.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2607>:
TABLE-US-03066 m761.seq 1 ATGAAAATAT CATTTCATTT AGCTTTATTA
CCCACGCTGA TTATTGCTTC 51 CTTCCCTGTT GCTGCCGCCG ATACGCAGGA
CAATGGTGAA CATTACACCG 101 CCACTCTGCC CACCGTTTCC GTGGTCGGAC
AGTCCGACAC CAGCGTACTC 151 AAAGGCTACA TCAACTACGA CGAAGCCGCC
GTTACCCGCA ACGGACAGCT 201 CATCAAAGAA ACGCCGCAAA CCATCGATAC
GCTCAATATC CAGAAAAACA 251 AAAATTACGG TACGAACGAT TTGAGTTCCA
TCCTCGAAGG CAATGCCGGC 301 ATCGACGCTG CCTACGATAT GCGCGGTGAA
AGCATTTTCC TGCGCGGTTT 351 TCAAGCCGAC GCATCCGATA TTTACCGCGA
CGGCGTGCGC GAAAGCGGAC 401 AAGTGCGCCG CAGTACTGCC AACATCGAGC
GCGTGGAAAT CCTGAAAGGC 451 CCGTCTTCCG TGCTTTACGG CCGCACCAAC
GGCGGCGGCG TCATCAACAT 501 GGTCAGCAAA TACGCCAACT TCAAACAAAG
CCGCAACATC GGAGCGGTTT 551 ACGGCTCATG GGCAAACCGC AGCCTGAATA
TGGACATTAA CGAAGTGCTG 601 AACAAAAACG TCGCCATCCG TCTCACCGGC
GAAGTCGGGC GCGCCAATTC 651 GTTCCGCAGC GGCATAGACA GCAAAAATGT
CATGGTTTCG CCCAGCATTA 701 CCGTCAAACT CGACAACGGC TTGAAGTGGA
CGGGGCAATA CACCTACGAC 751 AATGTGGAGC GCACGCCCGA CCGCAGTCCG
ACCAAGTCCG TGTACGACCG 801 CTTCGGACTG CCTTACCGCA TGGGGTTCGC
CCACCGGAAC GATTTTGTCA 851 AAGACAAGCT GCAAGTTTGG CGTTCCGACC
TTGAATACGC CTTCAACGAC 901 AAATGGCGTG CCCAATGGCA GCTCGCCCAC
CGCACGGCGG CGCAGGATTT 951 TGATCATTTC TATGCAGGCA GCGAAAATGG
CAACTTAATC AAACGTAACT 1001 ACGCCTGGCA GCAGACCGAC AACAAAACCC
TGTCGTCCAA CTTAACGCTC 1051 AACGGCGACT ACACCATCGG CCGTTTTGAA
AACCACCTGA CCGTAGGCAT 1101 GGATTACAGC CGCGAACACC GCAACCCGAC
ATTGGGTTTC AGCAGCGCCT 1151 TTTCCGCCTC CATCAACCCC TACGACCGCG
CAAGCTGGCC GGCTTCGGGC 1201 AGATTGCAGC CTATTCTGAC CCAAAACCGC
CACAAAGCCG ACTCCTACGG 1251 CATCTTTGTG CAAAACATCT TCTCCGCCAC
GCCCGATTTG AAATTCGTCC 1301 TCGGCGGCCG TTACGACAAA TACACCTTTA
ATTCCGAAAA CAAACTCACC 1351 GGCAGCAGCC GCCAATACAG CGGACACTCG
TTCAGCCCCA ACATCGGCGC 1401 AGTGTGGAAC ATCAATCCCG TCCACACACT
TTACGCCTCG TATAACAAAG 1451 GCTTCGCGCC TTATGGCGGA CGCGGCGGCT
ATTTGAGCAT CGATACGTTG 1501 TCTTCCGCCG TGTTCAACGC CGACCCCGAG
TACACCCGCC AATACGAAAC 1551 CGGCGTGAAA AGCAGTTGGC TGGACGACCG
CCTCAGCACT ACGTTGTCTG 1601 CCTACCAAAT CGAACGCTTC AATATCCGCT
ACCGCCCCGA TCCAAAAAAC 1651 AACCCTTATA TTTATGCGGT TAGCGGCAAA
CACCGTTCGC GCGGCGTGGA 1701 ATTGTCCGCC ATCGGGCAAA TCATCCCCAA
AAAACTCTAT CTGCGCGGTT 1751 CGTTGGGCGT GATGCAGGCG AAAGTCGTTG
AAGACAAAGA AAATCCCGAC 1801 CGAGTGGGCA TCCATTTGAA TAATACCAGC
AACGTTACCG GCAACCTGTT 1851 TTTCCGTTAT ACCCCGACCG AAAACCTCTA
CGGCGAAATC GGCGTAACCG 1901 GTACAGGCAA ACGCTACGGT TACAACTCAA
GAAATAAAGA AGTGACTACG 1951 CTTCCAGGCT TTGCCCGAGT TGATGCCATG
CTTGGCTGGA ACCATAAAAA 2001 TGTTAACGTT ACCTTTGCCG CAGCCAATCT
GCTCAATCAA AAATATTGGC 2051 GTTCGGACTC TATGCCGGGT AATCCGCGCG
GCTATACTGC CCGGGTAAAT 2101 TACCGTTTCT GA
This corresponds to the amino acid sequence <SEQ ID 2608; ORF
761>:
TABLE-US-03067 m761.pep 1 MKISFHLALL PTLIIASFPV AAADTQDNGE
HYTATLPTVS VVGQSDTSVL 51 KGYINYDEAA VTRNGQLIKE TPQTIDTLNI
QKNKNYGTND LSSILEGNAG 101 IDAAYDMRGE SIFLRGFQAD ASDIYRDGVR
ESGQVRRSTA NIERVEILKG 151 PSSVLYGRTN GGGVINMVSK YANFKQSRNI
GAVYGSWANR SLNMDINEVL 201 NKNVAIRLTG EVGRANSFRS GIDSKNVMVS
PSITVKLDNG LKWTGQYTYD 251 NVERTPDRSP TKSVYDRFGL PYRMGFAHRN
DFVKDKLQVW RSDLEYAFND 301 KWRAQWQLAH RTAAQDFDHF YAGSENGNLI
KRNYAWQQTD NKTLSSNLTL 351 NGDYTIGRFE NHLTVGMDYS REHRNPTLGF
SSAFSASINP YDRASWPASG 401 RLQPILTQNR HKADSYGIFV QNIFSATPDL
KFVLGGRYDK YTFNSENKLT 451 GSSRQYSGHS FSPNIGAVWN INPVHTLYAS
YNKGFAPYGG RGGYLSIDTL 501 SSAVFNADPE YTRQYETGVK SSWLDDRLST
TLSAYQIERF NIRYRPDPKN 551 NPYIYAVSGK HRSRGVELSA IGQIIPKKLY
LRGSLGVMQA KVVEDKENPD 601 RVGIHLNNTS NVTGNLFFRY TPTENLYGEI
GVTGTGKRYG YNSRNKEVTT 651 LPGFARVDAM LGWNHKNVNV TFAAANLLNQ
KYWRSDSMPG NPRGYTARVN 701 YRF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2609>:
TABLE-US-03068 a761.seq 1 ATGAAAATAT CATTTCATTT AGCTTTATTA
CCCACGCTGA TTATTGCTTC 51 CTTCCCTGTT GCTGCCGCCG ATACGCAGGA
CAATGGTGAA CATTACACCG 101 CCACTCTGCC CACCGTTTCC GTGGTCGGAC
AGTCCGACAC CAGCGTACTC 151 AAAGGCTACA TCAACTACGA CGAAGCCGCC
GTTACCCGCA ACGGACAGCT 201 CATCAAAGAA ACGCCGCAAA CCATCGATAC
GCTCAATATC CAGAAAAACA 251 AAAATTACGG CACGAACGAT TTGAGTTCCA
TCCTCGAAGG CAATGCCGGC 301 ATCGACGCCG CCTACGATAT GCGCGGCGAA
AGCATTTTCC TGCGCGGCTT 351 TCAAGCCGAC GCATCTGATA TTTACCGCGA
CGGCGTACGC GAAAGCGGGC 401 AGGTGCGCCG TAGCACCGCC AACATCGAGC
GCGTGGAAAT CCTGAAAGGT 451 CCGTCCTCCG TGCTTTATGG GCGTACCAAC
GGCGGCGGTG TCATCAACAT 501 GGTCAGCAAA TACGCCAACT TCAAACAAAG
CCGTAATATC GGTACGGTTT 551 ATGGTTCGTG GGCAAACCGC AGCCTGAATA
TGGACATCAA CGAAGTGCTG 601 AACAAAAACG TCGCCATCCG TCTCACCGGC
GAAGTCGGGC GCGCCAATTC 651 GTTCCGCAGC GGCATAGACA GCAAAAATGT
CATGGTTTCG CCCAGCATTA 701 CCGTCAAACT CGACAACGGC TTGAAGTGGA
CGGGGCAATA CACCTACGAC 751 AATGTGGAGC GCACGCCCGA CCGCAGTCCG
ACCAAGTCCG TGTACGACCG 801 CTTCGGACTG CCTTACCGCA TGGGGTTCGC
CCACCGGAAC GATTTTGTCA 851 AAGACAAGCT GCAAGTTTGG CGTTCCGACC
TTGAATACGC CTTCAACGAC 901 AAATGGCGTG CCCAATGGCA GCTCGCCCAC
CGCACGGCGG CGCAGGATTT 951 TGATCATTTC TATGCAGGCA GCGAAAATGG
CAACTTAATC AAACGTAACT 1001 ACGCCTGGCA GCAGACCGAC AACAAAACCC
TGTCGTCCAA CTTAACGCTC 1051 AACGGCGACT ACACCATCGG CCGTTTTGAA
AACCACCTGA CCGTAGGCAT 1101 GGATTACAGC CGCGAACACC GCAACCCGAC
ATTGGGTTTC AGCAGCGCCT 1151 TTTCCGCCTC CATCAACCCC TACGACCGCG
CAAGCTGGCC GGCTTCGGGC 1201 AGATTGCAGC CTATTCTGAC CCAAAACCGC
CACAAAGCCG ACTCCTACGG 1251 CATCTTTGTG CAAAACATCT TCTCCGCCAC
GCCCGATTTG AAATTCGTCC 1301 TCGGCGGCCG TTACGACAAA TACACCTTTA
ATTCCGAAAA CAAACTCACC 1351 GGCAGCAGCC GCCAATACAG CGGACACTCG
TTCAGCCCCA ACATCGGCGC 1401 AGTGTGGAAC ATCAATCCCG TCCACACACT
TTACGCCTCG TATAACAAAG 1451 GCTTCGCGCC TTATGGCGGA CGCGGCGGCT
ATTTGAGCAT CGATACGTTG 1501 TCTTCCGCCG TGTTCAACGC CGACCCCGAG
TACACCCGCC AATACGAAAC 1551 CGGCGTGAAA AGCAGTTGGC TGGACGACCG
CCTCAGCACT ACGTTGTCTG 1601 CCTACCAAAT CGAACGCTTC AATATCCGCT
ACCGCCCCGA TCCAAAAAAC 1651 AACCCTTATA TTTATGCGGT TAGCGGCAAA
CACCGTTCGC GCGGCGTGGA 1701 ATTGTCCGCC ATCGGGCAAA TCATCCCCAA
AAAACTCTAT CTGCGCGGTT 1751 CGTTGGGCGT GATGCAGGCG AAAGTCGTTG
AAGACAAAGA AAATCCCGAC 1801 CGAGTGGGCA TCCATTTGAA TAACACCAGC
AACGTTACCG GCAACCTGTT 1851 TTTCCGTTAT ACCCCGACCG AAAACCTCTA
CGGCGAAATC GGCGTAACCG 1901 GTACAGGCAA ACGCTACGGT TACGACTCAA
GAAATAAAGA AGTGACTACG 1951 CTTCCAGGCT TTGCCCGAGT TGATGCCATG
CTTGGCTGGA ACCATAAAAA 2001 TGTTAACGTT ACCTTTGCCG CAGCCAATCT
GTTCAATCAA AAATATTGGC 2051 GTTCGGACTC TATGCCGGGT AATCCGCGCG
GCTATACTGC CCGGGTAAAT 2101 TACCGTTTCT GA
This corresponds to the amino acid sequence <SEQ ID 2610; ORF
761.a>:
TABLE-US-03069 a761.pep 1 MKISFHLALL PTLIIASFPV AAADTQDNGE
HYTATLPTVS VVGQSDTSVL 51 KGYINYDEAA VTRNGQLIKE TPQTIDTLNI
QKNKNYGTND LSSILEGNAG 101 IDAAYDMRGE SIFLRGFQAD ASDIYRDGVR
ESGQVRRSTA NIERVEILKG 151 PSSVLYGRTN GGGVINMVSK YANFKQSRNI
GTVYGSWANR SLNMDINEVL 201 NKNVAIRLTG EVGRANSFRS GIDSKNVMVS
PSITVKLDNG LKWTGQYTYD 251 NVERTPDRSP TKSVYDRFGL PYRMGFAHRN
DFVKDKLQVW RSDLEYAFND 301 KWRAQWQLAH RTAAQDFDHF YAGSENGNLI
KRNYAWQQTD NKTLSSNLTL 351 NGDYTIGRFE NHLTVGMDYS REHRNPTLGF
SSAFSASINP YDRASWPASG 401 RLQPILTQNR HKADSYGIFV QNIFSATPDL
KFVLGGRYDK YTFNSENKLT 451 GSSRQYSGHS FSPNIGAVWN INPVHTLYAS
YNKGFAPYGG RGGYLSIDTL 501 SSAVFNADPE YTRQYETGVK SSWLDDRLST
TLSAYQIERF NIRYRPDPKN 551 NPYIYAVSGK HRSRGVELSA IGQIIPKKLY
LRGSLGVMQA KVVEDKENPD 601 RVGIHLNNTS NVTGNLFFRY TPTENLYGEI
GVTGTGKRYG YDSRNKEVTT 651 LPGFARVDAM LGWNHKNVNV TFAAANLFNQ
KYWRSDSMPG NPRGYTARVN 701 YRF* m761/a761 99.6% identity in 703 aa
overlap 10 20 30 40 50 60 m761.pep
MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQSDTSVLKGYINYDEAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQSDTSVLKGYINYDEAA 10 20
30 40 50 60 70 80 90 100 110 120 m761.pep
VTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGIDAAYDMRGESIFLRGFQAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
VTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGIDAAYDMRGESIFLRGFQAD 70 80
90 100 110 120 130 140 150 160 170 180 m761.pep
ASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTNGGGVINMVSKYANFKQSRNI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
ASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTNGGGVINMVSKYANFKQSRNI 130
140 150 160 170 180 190 200 210 220 230 240 m761.pep
GAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSFRSGIDSKNVMVSPSITVKLDNG
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
GTVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSFRSGIDSKNVMVSPSITVKLDNG 190
200 210 220 230 240 250 260 270 280 290 300 m761.pep
LKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGFAHRNDFVKDKLQVWRSDLEYAFND
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
LKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGFAHRNDFVKDKLQVWRSDLEYAFND 250
260 270 280 290 300 310 320 330 340 350 360 m761.pep
KWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNYAWQQTDNKTLSSNLTLNGDYTIGRFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
KWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNYAWQQTDNKTLSSNLTLNGDYTIGRFE 310
320 330 340 350 360 370 380 390 400 410 420 m761.pep
NHLTVGMDYSREHRNPTLGFSSAFSASINPYDRASWPASGRLQPILTQNRHKADSYGIFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
NHLTVGMDYSREHRNPTLGFSSAFSASINPYDRASWPASGRLQPILTQNRHKADSYGIFV 370
380 390 400 410 420 430 440 450 460 470 480 m761.pep
QNIFSATPDLKFVLGGRYDKYTFNSENKLTGSSRQYSGHSFSPNIGAVWNINPVHTLYAS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
QNIFSATPDLKFVLGGRYDKYTFNSENKLTGSSRQYSGHSFSPNIGAVWNINPVHTLYAS 430
440 450 460 470 480 490 500 510 520 530 540 m761.pep
YNKGFAPYGGRGGYLSIDTLSSAVFNADPEYTRQYETGVKSSWLDDRLSTTLSAYQIERF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
YNKGFAPYGGRGGYLSIDTLSSAVFNADPEYTRQYETGVKSSWLDDRLSTTLSAYQIERF 490
500 510 520 530 540 550 560 570 580 590 600 m761.pep
NIRYRPDPKNNPYIYAVSGKHRSRGVELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a761
NIRYRPDPKNNPYIYAVSGKHRSRGVELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPD 550
560 570 580 590 600 610 620 630 640 650 660 m761.pep
RVGIHLNNTSNVTGNLFFRYTPTENLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAM
|||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||| a761
RVGIHLNNTSNVTGNLFFRYTPTENLYGEIGVTGTGKRYGYDSRNKEVTTLPGFARVDAM 610
620 630 640 650 660 670 680 690 700 m761.pep
LGWNHKNVNVTFAAANLLNQKYWRSDSMPGNPRGYTARVNYRFX
|||||||||||||||||:|||||||||||||||||||||||||| a761
LGWNHKNVNVTFAAANLFNQKYWRSDSMPGNPRGYTARVNYRFX 670 680 690 700
[0416] g762.seq Not yet found
[0417] g762.pep Not yet found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2611>:
TABLE-US-03070 m762.seq 1 ATGAAGTGGT TATTAAATAT GATAATGAGA
CCTATTAAAT TTAGTATGGT 51 AAATACGTTA TTATTTATTG TTATATGTAG
TTCATTTTTT GATCTGCTCG 101 TTCAATTATG TACAATTTTA TTTCATAGCC
AAAAAATATA CTTTATTACA 151 TTATTTTTAT TATTTATTTT TAATTTTGTT
ACAAAATCTA TCTATATGGC 201 AATTATTTAT CCTATTTTAT ATTTTTTTAC
GATAAAAAAA TATTATCCTT 251 ACTCTAGGAA AGTGATAATT CTATTATCAT
TAGCATTATC TATATATTTT 301 AGTTTTATGG ACTTTTACTT TTTTTCCATA
TATTCAGATA ACCTTAGCTA 351 TGAAACGGAG CCTTTACATT TATACATCCC
TATTATTATT AATTTTTTCT 401 CACTTTTAGT TTCTAATTTT ATTTTATCTT
TTATCAACAA GTAA
This corresponds to the amino acid sequence <SEQ ID 2612; ORF
762>:
TABLE-US-03071 m762.pep 1 MKWLLNMIMR PIKFSMVNTL LFIVICSSFF
DLLVQLCTIL FHSQKIYFIT 51 LFLLFIFNFV TKSIYMAIIY PILYFFTIKK
YYPYSRKVII LLSLALSIYF 101 SFMDFYFFSI YSDNLSYETE PLHLYIPIII
NFFSLLVSNF ILSFINK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2613>:
TABLE-US-03072 a762.seq 1 ATGAAGTGGT TATTAAATAT GATAATGAGA
CCTATTAAAT TTAGTATGGT 51 AAATACGTTA TTATTTATTG TTATATGTAG
TTCATTTTTT GATCTGCTCG 101 TTCAATTATG TACAATTTTA TTTCATAGCC
AAAAAATATA CTTTATTACA 151 TTATTTTTAT TATTTATTTT TAATTTTGTT
ACAAAATCTA TCTATATGGC 201 AATTATTTAT CCTATTTTAT ATTTTTTTAC
GATAAAAAAA TATTATCCTT 251 ACTCTAGGAA AGTGATAATT CTATTATCAT
TAGCATTATC TATATATTTT 301 AGTTTTATGG ACTTTTACTT TTTTTCCATA
TATTCAGATA ACCTTAGCTA 351 TGAAACGGAG CCTTTACATT TATACATCCC
TATTATTATT AATTTTTTCT 401 CACTTTTAGT TTCTAATTTT ATTTTATCTT
TTATCAACAA GTAA
This corresponds to the amino acid sequence <SEQ ID 2614; ORF
762.a>:
TABLE-US-03073 a762.pep 1 MKWLLNMIMR PIKFSMVNTL LFIVICSSFF
DLLVQLCTIL FHSQKIYFIT 51 LFLLFIFNFV TKSIYMAIIY PILYFFTIKK
YYPYSRKVII LLSLALSIYF 101 SFMDFYFFSI YSDNLSYETE PLHLYIPIII
NFFSLLVSNF ILSFINK* m762/a762 100.0% identity in 147 aa overlap 10
20 30 40 50 60 m762.pep
MKWLLNMIMRPIKFSMVNTLLFIVICSSFFDLLVQLCTILFHSQKIYFITLFLLFIFNFV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a762
MKWLLNMIMRPIKFSMVNTLLFIVICSSFFDLLVQLCTILFHSQKIYFITLFLLFIFNFV 10 20
30 40 50 60 70 80 90 100 110 120 m762.pep
TKSIYMAIIYPILYFFTIKKYYPYSRKVIILLSLALSIYFSFMDFYFFSIYSDNLSYETE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a762
TKSIYMAIIYPILYFFTIKKYYPYSRKVIILLSLALSIYFSFMDFYFFSIYSDNLSYETE 70 80
90 100 110 120 130 140 m762.pep PLHLYIPIIINFFSLLVSNFILSFINKX
|||||||||||||||||||||||||||| a762 PLHLYIPIIINFFSLLVSNFILSFINKX 130
140
[0418] g763.seq not yet found
[0419] g763.pep not yet found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2615>:
TABLE-US-03074 m763.seq 1 ATGACATTGC TCAATCTAAT GATAATGCAA
GATTACGGTA TTTCCGTTTG 51 CCTGACACTG ACGCCCTATT TGCAACATGA
ACTATTTTCG GCTATGAAAT 101 CCTATTTTTC CAAATATATC CTACCCGTTT
CACTTTTTAC CTTGCCACTA 151 TCCCTTTCCC CATCCGTTTC GGCTTTTACG
CTGCCTGAAG CATGGCGGGC 201 GGCGCAGCAA CATTCGGCTG ATTTTCAAGC
GTCCCATTAC CAGCGTGATG 251 CAGTGCGCGC ACGGCAACAA CAAGCCAAGG
CCGCATTCCT TCCCCATGTA 301 TCCGCCAATG CCAGCTACCA GCGCCAGCCG
CCATCGATTT CTTCCACCCG 351 CGAAACACAG GGATGGAGCG TGCAGGTGGG
ACAAACCTTA TTTGACGCTG 401 CCAAATTTGC ACAATACCGC CAAAGCAGGT
TCGATACGCA GGCTGCAGAA 451 CAGCGTTTCG ATGCGGCACG CGAAGAATTG
CTGTTGAAAG TTGCCGAAAG 501 TTATTTCAAC GTTTTACTCA GCCGAGACAC
CGTTGCCGCC CATGCGGCGG 551 AAAAAGAGGC TTATGCCCAG CAGGTAAGGC
AGGCGCAGGC TTTATTCAAT 601 AAAGGTGCTG CCACCGCGCT GGATATTCAC
GAAGCCAAAG CCGGTTACGA 651 CAATGCCCTG GCCCAAGAAA TCGCCGTATT
GGCTGAGAAA CAAACCTATG 701 AAAACCAGTT GAACGACTAC ACCGACCTGG
ATAGCAAACA AATCGAGGCC 751 ATAGATACCG CCAACCTGTT GGCACGCTAT
CTGCCCAAGC TGGAACGTTA 801 CAGTCTGGAT GAATGGCAGC GCATTGCCTT
ATCCAACAAT CATGAATACC 851 GGATGCAGCA GCTTGCCCTG CAAAGCAGCG
GACAGGCGCT TCGGGCAGCA 901 CAGAACAGCC GCTATCCCAC CGTTTCTGCC
CATGTCGGCT ATCAGAATAA 951 CCTCTACACT TCATCTGCGC AGAATAATGA
CTACCACTAT CGGGGCAAAG 1001 GGATGAGCGT CGGCGTACAG TTGAATTTGC
CGCTTTATAC CGGCGGAGAA 1051 TTGTCGGGCA AAATCCATGA AGCCGAAGCG
CAATACGGGG CCGCCGAAGC 1101 ACAGCTGACC GCAACCGAGC GGCACATCAA
ACTCGCCGTA CGCCAGGCTT 1151 ATACCGAAAG CGGTGCGGCG CGTTACCAAA
TCATGGCGCA AGAACGGGTT 1201 TTGGAAAGCA GCCGTTTGAA ACTGAAATCG
ACCGAAACCG GCCAACAATA 1251 CGGCATCCGC AACCGGCTGG AAGTAATACG
GGCGCGGCAG GAAGTCGCCC 1301 AAGCAGAACA GAAACTGGCT CAAGCACGGT
ATAAATTCAT GCTGGCTTAT 1351 TTGCGCTTGG TGAAAGAGAG CGGGTTAGGG
TTGGAAACGG TATTTGCGGA 1401 ATAA
This corresponds to the amino acid sequence <SEQ ID 2616; ORF
763>:
TABLE-US-03075 m763.pep 1 MTLLNLMIMQ DYGISVCLTL TPYLQHELFS
AMKSYFSKYI LPVSLFTLPL 51 SLSPSVSAFT LPEAWRAAQQ HSADFQASHY
QRDAVRARQQ QAKAAFLPHV 101 SANASYQRQP PSISSTRETQ GWSVQVGQTL
FDAAKFAQYR QSRFDTQAAE 151 QRFDAAREEL LLKVAESYFN VLLSRDTVAA
HAAEKEAYAQ QVRQAQALFN 201 KGAATALDIH EAKAGYDNAL AQEIAVLAEK
QTYENQLNDY TDLDSKQIEA 251 IDTANLLARY LPKLERYSLD EWQRIALSNN
HEYRMQQLAL QSSGQALRAA 301 QNSRYPTVSA HVGYQNNLYT SSAQNNDYHY
RGKGMSVGVQ LNLPLYTGGE 351 LSGKIHEAEA QYGAAEAQLT ATERHIKLAV
RQAYTESGAA RYQIMAQERV 401 LESSRLKLKS TETGQQYGIR NRLEVIRARQ
EVAQAEQKLA QARYKFMLAY 451 LRLVKESGLG LETVFAE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2617>:
TABLE-US-03076 a763.seq 1 ATGACATTGC TCAATCTAAT GATAATGCAA
GATTACGGTA TTTCCGTTTG 51 CCTGACACTG ACGCCCTATT TGCAACATGA
ACTATTTTCG GCTATGAAAT 101 CCTATTTTTC CAAATATATC CTACCCGTTT
CACTTTTTAC CTTGCCACTA 151 TCCCTTTCCC CATCCGTTTC GGCTTTTACG
CTGCCTGAAG CATGGCGGGC 201 GGCGCAGCAA CATTCGGCTG ATTTTCAAGC
GTCCCATTAC CAGCGTGATG 251 CAGTGCGCGC ACGGCAACAA CAAGCCAAGG
CCGCATTCCT TCCCCATGTA 301 TCCGCCAATG CCAGCTACCA GCGCCAGCCG
CCATCGATTT CTTCCACCCG 351 CGAAACACAG GGATGGAGCG TGCAGGTGGG
ACAAACCTTA TTTGACGCTG 401 CCAAATTTGC ACAATACCGC CAAAGCAGGT
TCGATACGCA GGCTGCAGAA 451 CAGCGTTTCG ATGCGGCACG CGAAGAATTG
CTGTTGAAAG TTGCCGAAAG 501 TTATTTCAAC GTTTTACTCA GCCGAGACAC
CGTTGCCGCC CATGCGGCGG 551 AAAAAGAGGC TTATGCCCAG CAGGTAAGGC
AGGCGCAGGC TTTATTCAAT 601 AAAGGTGCTG CCACCGCGCT GGATATTCAC
GAAGCCAAAG CCGGTTACGA 651 CAATGCCCTG GCCCAAGAAA TCGCCGTATT
GGCTGAGAAA CAAACCTATG 701 AAAACCAGTT GAACGACTAC ACCGGCCTGG
ACAGCAAACA AATCGAGGCC 751 ATAGATACCG CCAACCTGTT GGCACGCTAT
CTGCCGAAGC TGGAACGTTA 801 CAGTCTGGAT GAATGGCAGC GCATTGCCTT
ATCCAACAAT CATGAATACC 851 GGATGCAGCA GCTTGCCCTG CAAAGCAGCG
GACAGGCGCT TCGGGCAGCA 901 CAGAACAGCC GCTATCCCAC CGTTTCTGCC
CATGTCGGCT ATCAGAATAA 951 CCTCTACACT TCATCTGCGC AGAATAATGA
CTACCACTAT CGGGGCAAAG 1001 GGATGAGCGT CGGCGTACAG TTGAATTTGC
CGCTTTATAC CGGCGGAGAA 1051 TTGTCGGGCA AAATCCATGA AGCCGAAGCG
CAATACGGGG CTGCCGAAGC 1101 ACAGCTGACC GCAACCGAGC GGCACATCAA
ACTCGCCGTA CGCCAGGCTT 1151 ATACCGAAAG CGGTGCGGCG CGTTACCAAA
TCATGGCGCA AGAACGGGTT 1201 TTGGAAAGCA GCCGTTTGAA ACTGAAATCG
ACCGAAACCG GCCAACAATA 1251 CGGCATCCGC AACCGGCTGG AAGTAATACG
GGCGCGGCAG GAAGTCGCCC 1301 AAGCAGAACA GAAACTGGCT CAAGCACGGT
ATAAATTCAT GCTGGCTTAT 1351 TTGCGCTTGG TGAAAGAGAG CGGGTTAGGG
TTGGAAACGG TATTTGCGGA 1401 ATAA
This corresponds to the amino acid sequence <SEQ ID 2618; ORF
763.a>:
TABLE-US-03077 a763.pep 1 MTLLNLMIMQ DYGISVCLTL TPYLQHELFS
AMKSYFSKYI LPVSLFTLPL 51 SLSPSVSAFT LPEAWRAAQQ HSADFQASHY
QRDAVRARQQ QAKAAFLPHV 101 SANASYQRQP PSISSTRETQ GWSVQVGQTL
FDAAKFAQYR QSRFDTQAAE 151 QRFDAAREEL LLKVAESYFN VLLSRDTVAA
HAAEKEAYAQ QVRQAQALFN 201 KGAATALDIH EAKAGYDNAL AQEIAVLAEK
QTYENQLNDY TGLDSKQIEA 251 IDTANLLARY LPKLERYSLD EWQRIALSNN
HEYRMQQLAL QSSGQALRAA 301 QNSRYPTVSA HVGYQNNLYT SSAQNNDYHY
RGKGMSVGVQ LNLPLYTGGE 351 LSGKIHEAEA QYGAAEAQLT ATERHIKLAV
RQAYTESGAA RYQIMAQERV 401 LESSRLKLKS TETGQQYGIR NRLEVIRARQ
EVAQAEQKLA QARYKFMLAY 451 LRLVKESGLG LETVFAE* m763/a763 99.8%
identity in 467 aa overlap 10 20 30 40 50 60 m763.pep
MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVSLFTLPLSLSPSVSAFT 10 20
30 40 50 60 70 80 90 100 110 120 m763.pep
LPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
LPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSANASYQRQPPSISSTRETQ 70 80
90 100 110 120 130 140 150 160 170 180 m763.pep
GWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREELLLKVAESYFNVLLSRDTVAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
GWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREELLLKVAESYFNVLLSRDTVAA 130
140 150 160 170 180 190 200 210 220 230 240 m763.pep
HAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
HAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDNALAQEIAVLAEKQTYENQLNDY 190
200 210 220 230 240 250 260 270 280 290 300 m763.pep
TDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAA |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
TGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIALSNNHEYRMQQLALQSSGQALRAA 250
260 270 280 290 300 310 320 330 340 350 360 m763.pep
QNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
QNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKGMSVGVQLNLPLYTGGELSGKIHEAEA 310
320 330 340 350 360 370 380 390 400 410 420 m763.pep
QYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERVLESSRLKLKSTETGQQYGIR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a763
QYGAAEAQLTATERHIKLAVRQAYTESGAARYQIMAQERVLESSRLKLKSTETGQQYGIR 370
380 390 400 410 420 430 440 450 460 m763.pep
NRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAEX
|||||||||||||||||||||||||||||||||||||||||||||||| a763
NRLEVIRARQEVAQAEQKLAQARYKFMLAYLRLVKESGLGLETVFAEX 430 440 450
460
[0420] g764.seq not found yet
[0421] g764.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2619>:
TABLE-US-03078 m764.seq 1 ATGTTTTTCT CCGCCCTGAA ATCCTTTCTT
TCTCGATACA TTACTGTATG 51 GCGCAATGTT TGGGCGGTGC GCGACCAGTT
GAAACCGCCC AAACGCACGG 101 CGGAAGAACA GGCGTTTTTG CCCGCGCATT
TGGAACTGAC CGATACGCCG 151 GTCTCTGCCG CTCCGAAATG GGCGGCGCGT
TTTATTATGG CGTTTGCGCT 201 TTTGGCTTTG TTGTGGTCCT GGTTCGGCAA
AATCGATATT GTGGCGGCGG 251 CTTCGGGCAA AACGGTGTCG GGCGGGCGCA
GCAAAACCAT CCAGCCGCTG 301 GAAACGGCGG TGGTTAAGGC GGTACATGTG
CGCGACGGGC AGCATGTGAA 351 ACAGGGAGAA ACGCTGGCGG AACTGGAGGC
TGTGGGAACA GACAGCGATG 401 TGGTGCAGTC GGAGCAGGCT TTGCAGGCTG
CCCAATTGTC CAAACTGCGT 451 TATGAAGCGG TATTGGCGGC ATTGGAAAGC
CGTACCGTGC CGCATATCGA 501 TATGGCGCAA GCACGGTCTT TAGGTCTCTC
CGATGCCGAT GTGCAATCGG 551 CGCAGGTGTT GGCGCAGCAC CAGTATCAGG
CATGGGCGGC GCAGGATGCG 601 CAATTGCAGT CGGCTTTGCG CGGCCATCAG
GCGGAATTGC AGTCGGCCAA 651 GGCGCAGGAG CAGAAGCTGG TTTCGGTGGG
GGCGATCGAG CAGCAGAAAA 701 CAGCAGACTA CCGCCGTTTG CGGGCCGACA
ATTTTATTTC GGAACATGCG 751 TTTTTGGAGC AGCAGAGCAA ATCGGTCAGC
AATTGGAACG ATTTGGAAAG 801 TACGCGCGGT CAGATGAGGC AGATTCAGGC
GGCCATTGCA CAGGCGGAGC 851 AGAATCGGGT GCTGAATACG CAGAACCTGA
AACGCGATAC GCTGGATGCG 901 CTGCGCCAGG CAAACGAACA GATTGACCAA
TACCGCGGCC AAACGGATAA 951 GGCAAAGCAG CGGCAGCAGC TGATGACAAT
ACAGTCGCCT GCGGACGGCA 1001 CGGTGCAGGA ATTGGCTACC TATACGGTGG
GCGGTGTGGT GCAGGCTGCC 1051 CAAAAAATGA TGGTGATTGC GCCCGATGAC
GACAAAATGG ACGTGGAAGT 1101 TTTGGTATTG AACAAAGACA TCGGTTTTGT
GGAACAGGGA CAGGATGCGG 1151 TGGTGAAGAT TGAGAGCTTT CCCTATACGC
GCTACGGTTA TCTGACGGGC 1201 AAGGTGAAAA GTGTCAGCCA TGATGCGGTA
AGCCACGAAC AGTTGGGCTT 1251 GGTTTATACG GCGGTGGTGT CGCTGGACAA
ACATACCTTG AATATTGACG 1301 GCAAAGCAGT GAATCTGACG GCGGGCATGA
ATGTCACGGC GGAGATTAAA 1351 ACGGGTAAAC GGCGGGTGCT GGATTATCTG
TTAAGCCCGC TGCAAACCAA 1401 ATTGGACGAA AGCTTTAGGG AGCGATAG
This corresponds to the amino acid sequence <SEQ ID 2620; ORF
764>:
TABLE-US-03079 m764.pep 1 MFFSALKSFL SRYITVWRNV WAVRDQLKPP
KRTAEEQAFL PAHLELTDTP 51 VSAAPKWAAR FIMAFALLAL LWSWFGKIDI
VAAASGKTVS GGRSKTIQPL 101 ETAVVKAVHV RDGQHVKQGE TLAELEAVGT
DSDVVQSEQA LQAAQLSKLR 151 YEAVLAALES RTVPHIDMAQ ARSLGLSDAD
VQSAQVLAQH QYQAWAAQDA 201 QLQSALRGHQ AELQSAKAQE QKLVSVGAIE
QQKTADYRRL RADNFISEHA 251 FLEQQSKSVS NWNDLESTRG QMRQIQAAIA
QAEQNRVLNT QNLKRDTLDA 301 LRQANEQIDQ YRGQTDKAKQ RQQLMTIQSP
ADGTVQELAT YTVGGVVQAA 351 QKMMVIAPDD DKMDVEVLVL NKDIGFVEQG
QDAVVKIESF PYTRYGYLTG 401 KVKSVSHDAV SHEQLGLVYT AVVSLDKHTL
NIDGKAVNLT AGMNVTAEIK 451 TGKRRVLDYL LSPLQTKLDE SFRER*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2621>:
TABLE-US-03080 a764.seq (partial) 1 ATGTTTTTCT CCGCCCTGAA
ATCCTTTCTT TCCCGCTACA TTACCGTATG 51 GCGCAATGTT TGGGCGGTGC
GCGACCAGTT GGAACCGCCC AAACGCACGG 101 CGGAAGAACA GGCGTTTTTG
CCCGCGCATT TGGAACTGAC CGATACGCCG 151 GTCTCTGCCG CTCCGAAATG
GGCGGCGCGT TTTATTATGG CGTTTGCGCT 201 TTTGGCTTTG TTGTGGTCCT
GGTTCGGCAA AATCGATATT GTGGCGGCGG 251 CTTCGGGCAA AACGGTGTCG
GGCGGGCGCA GCAAAACCAT CCAGCCGCTG 301 GAAACGGTGG TGGTTAAGGC
GGTACATGTG CGCGACGGGC AGCATGTGAA 351 ACAGGGAGAA ACGCTGGCGG
AACTGGAGGC TGTGGGAACA GACAGCGATG 401 TGGTGCAGTC GGAGCAGGCT
TTGCAGGCTG CCCAATTGTC CAAACTGCGT 451 TATGAAGCGG TATTGGCGGC
ATTGGAAAGC CGTACCGTGC CGCATATCGA 501 TATGGCGCAA GCACGGTCTT
TAGGTCTCTC CGATGCCGAT GTGCAATCGG 551 CGCAGGTGTT GGCGCAGCAC
CAGTATCAGG CATGGGCGGC GCAGGATGCG 601 CAATTGCAGT CGGCTTTGCG
CGGCCATCAG GCGGAATTGC AGTCGGCCAA 651 GGCGCAGGAG CAGAAGCTGG
TTTCGGTGGG GGCGATCGAG CAGCAGAAAA 701 CAGCAGACTA CCGCCGTTTG
CGGGCCGACA ATTTTATTTC GGAACATGCG 751 TTTTTGGAGC AGCAGAGCAA
ATCGGTCAGC AATTGGAACG ATTTGGAAAG 801 TACGCGCGGT CAGATGAGGC
AGATTCAGGC GGCCATTGCA CAGGCGGAGC 851 AGAATCGGGT GCTGAATACG
CAGAACCTGA AACGCGATAC GCTGGATGCG 901 CTGCGCCAGG CAAACGAACA
GATTGACCAA TACCGCGGCC AAACGGATAA 951 GGCAAAGCAG CGGCAGCAGC
TGATGACAAT ACAGTCGCCT GCGGACGGCA 1001 CGGTGCAGGA ATTGGCCACC
TATACGGTGG GCGGTGTGGT GCAGGCTGCC 1051 CAAAAAATGA TGGTGGTTGC
GCCCGATGAC GACAAAATGG ACGTGGAAGT 1101 TTTGGTATTG AACAAAGACA
TCGGTTTTGT GGAACAGGGA CAGGATGCGG 1151 TGGTGAAGAT TGAGAGTTTT
CCCTATACGC GCTACGGTTA TCTGACGGGC 1201 AAGGTGAAAA GTGTCAGCCA
TGATGCGGTA AGCCACGAAC AGTTGGGCTT 1251 GGTTTATACG GCGGTGGTGT
CGCTGGACAA ACATACCTTG AATATTGACG 1301 GCAAA
This corresponds to the amino acid sequence <SEQ ID 2622; ORF
764.a>:
TABLE-US-03081 a764.pep (partial) 1 MFFSALKSFL SRYITVWRNV
WAVRDQLEPP KRTAEEQAFL PAHLELTDTP 51 VSAAPKWAAR FIMAFALLAL
LWSWFGKIDI VAAASGKTVS GGRSKTIQPL 101 ETVVVKAVHV RDGQHVKQGE
TLAELEAVGT DSDVVQSEQA LQAAQLSKLR 151 YEAVLAALES RTVPHIDMAQ
ARSLGLSDAD VQSAQVLAQH QYQAWAAQDA 201 QLQSALRGHQ AELQSAKAQE
QKLVSVGAIE QQKTADYRRL RADNFISEHA 251 FLEQQSKSVS NWNDLESTRG
QMRQIQAAIA QAEQNRVLNT QNLKRDTLDA 301 LRQANEQIDQ YRGQTDKAKQ
RQQLMTIQSP ADGTVQELAT YTVGGVVQAA 351 QKMMVVAPDD DKMDVEVLVL
NKDIGFVEQG QDAVVKIESF PYTRYGYLTG 401 KVKSVSHDAV SHEQLGLVYT
AVVSLDKHTL NIDGK m764/a764 99.3% identity in 435 aa overlap 10 20
30 40 50 60 m764.pep
MFFSALKSFLSRYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHLELTDTPVSAAPKWAAR
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| a764
MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHLELTDTPVSAAPKWAAR 10 20
30 40 50 60 70 80 90 100 110 120 m764.pep
FIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGE
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| a764
FIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLETVVVKAVHVRDGQHVKQGE 70 80
90 100 110 120 130 140 150 160 170 180 m764.pep
TLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALESRTVPHIDMAQARSLGLSDAD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a764
TLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALESRTVPHIDMAQARSLGLSDAD 130
140 150 160 170 180 190 200 210 220 230 240 m764.pep
VQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKAQEQKLVSVGAIEQQKTADYRRL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a764
VQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKAQEQKLVSVGAIEQQKTADYRRL 190
200 210 220 230 240 250 260 270 280 290 300 m764.pep
RADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQAEQNRVLNTQNLKRDTLDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a764
RADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQAEQNRVLNTQNLKRDTLDA 250
260 270 280 290 300 310 320 330 340 350 360 m764.pep
LRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQELATYTVGGVVQAAQKMMVIAPDD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| a764
LRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQELATYTVGGVVQAAQKMMVVAPDD 310
320 330 340 350 360 370 380 390 400 410 420 m764.pep
DKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYGYLTGKVKSVSHDAVSHEQLGLVYT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a764
DKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYGYLTGKVKSVSHDAVSHEQLGLVYT 370
380 390 400 410 420 430 440 450 460 470 m764.pep
AVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGKRRVLDYLLSPLQTKLDESFRERX
||||||||||||||| a764 AVVSLDKHTLNIDGK 430
[0422] g765.seq not yet found
[0423] g765.pep not yet found
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2623>:
TABLE-US-03082 m765.seq 1 ATGTTAAGAT GCCGTCCGAA ATCCGTTTTG
GATTCAGACG GCATTTTTTT 51 GAAATTTAAT TTTTTAAGGA GTAAACCTAA
ATATGAAATT TCCTTCCTTC 101 CTTCCTTTAA ACGGATACTC TGCCTGTCGG
CAGTAATCTC GGTATTGGGG 151 GCTTGTGCGG TCGTTGCTGA TGTTTACGGT
CATGATTCCG CCACAATGAA 201 CGCTGCGGCT GCCAAAGATT ATATGAAAAC
GGTTGAGTTA AACAAGTCTG 251 CCGGCAATGT CGATACCACA TCCAGAACAG
CCCGCAGGGT GCAGGCAGTA 301 TTTCGACGTA TGCTGCCTTA TGCCGATGCG
GCAAATAATA CCAGCCATAA 351 GTTTGACTGG AAAATGACGG TTTTCAAAAA
CGATGAGCTG AACGCGTGGG 401 CAATGCCCGG TGGAAAAATG GCGTTTTATA
CGGGGATAGT CGACAAACTC 451 AAGCTGACCG ATGACGAAAT TGCCGCCATT
ATGGGGCATG AAATGACGCA 501 CGCCCTGCAT GAACACGGTA AAAATAAGGT
CGGGCAGCAA ATCTTGACCA 551 ATACGGCGGC GCAGATAGGC ACGCAGATTA
TATTAGACAA AAAACCGGAT 601 ACTAATCCGG AATTGGTCGG ATTGGGTATG
GATATTTTGG GGACGTACGG 651 TCTTACCTTG CCTTATAGCC GCAGCTTGGA
AGAAGAAGCC GATGAGGGGG 701 GAATGATGTT GATGGCGCAG GCAGGCTATC
ATCCGGCGGC CGCTGTCAGG 751 GTTTGGGAAA AAATGAATCA GGAAAACGAC
CAAAACGGCT TTATTTATGC 801 TATTACCTCT ACTCATCCGA CAAACAATGC
CCGTATAGAA AATCTAAAAC 851 GGTTGTTGCC GACCGTTATG CCGGTTTATG
AGCAAAGTGT CAGAAATAAG 901 GGGCGCGTTA ATAAAAAACG TCGGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 2624; ORF
765>:
TABLE-US-03083 m765.pep 1 MLRCRPKSVL DSDGIFLKFN FLRSKPKYEI
SFLPSFKRIL CLSAVISVLG 51 ACAVVADVYG HDSATMNAAA AKDYMKTVEL
NKSAGNVDTT SRTARRVQAV 101 FRRMLPYADA ANNTSHKFDW KMTVFKNDEL
NAWAMPGGKM AFYTGIVDKL 151 KLTDDEIAAI MGHEMTHALH EHGKNKVGQQ
ILTNTAAQIG TQIILDKKPD 201 TNPELVGLGM DILGTYGLTL PYSRSLEEEA
DEGGMMLMAQ AGYHPAAAVR 251 VWEKMNQEND QNGFIYAITS THPTNNARIE
NLKRLLPTVM PVYEQSVRNK 301 GRVNKKRRR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2625>:
TABLE-US-03084 a765.seq 1 ATGTTAAGAT GCCGTCCGAA ATCCGTTTTG
GATTCAGACG GCATTTTTTT 51 GAAATTTAAT TTTTTAAGGA GTAAACCTAA
ATATGAAATT TCCTTCCTTC 101 CTTCCTTTAA ACGGATACTC TGCCTGTCGG
CAGTAATCTC GGTATTGGGG 151 GCTTGTACGG TCGTTGCTGA TGTTTACGGT
CAGGATTCCG CCACAATGAA 201 TGCTGCGGCT GCCGAAGATT ATATGAAAAC
GGTTGAGTTG AACAAGTCTG 251 CCGGCAATGT CGATACTACA TCCAAAACAG
CCCGTAGGGT GCAGGCAGTA 301 TTTCGACGTA TGTTGCCTTA TGCCGATGCG
GCAAATAATA CCGGCCATAA 351 GTTTGACTGG AAAATGACGG TTTTCAAAAA
CGATGAGCTG AACGCGTGGG 401 CAATGCCCGG CGGGAAAATG GCGTTTTATA
CGGGGATAGT CGATAAACTT 451 AAGCTGACCG ATGGCGAAAT TGCCGCCATT
ATGGGGCATG AAATGACGCA 501 TGCCCTGCAT GAACACGGTA AAAATAAGGT
CGGGCAGAAA ATCTTGACTA 551 ATATGGCGGC GCAGATAGGC ACGCAGATTA
TATTAGACAA AAAACCGGAC 601 ACTAATCCGG AATTGGTCGG ATTGGGTATG
GATATTTTGG GGATGTACGG 651 CATTACCTTG CCTTATAGCC GCAGCTTGGA
AGAAGAAGCC GATGAGGGGG 701 GAATGATGTT GATGGCGCAG GCAGGCTATC
ATCCGGCAGC CGCTGTCAGG 751 GTTTGGGAAA AAATGAATCA GGAAAACGAC
CAAAACGGCT TTATTTATGC 801 TATTACCTCT ACTCATCCGA CAAACAATGC
CCGTATAGAA AATCTAAAAC 851 GGTTGTTGCC GACCGTTATG CCGGTTTATG
AGCACAGTGT TAGAAATAAG 901 GGGCGCGTTA ATAAAAACCG TCGGCGTTAA
This corresponds to the amino acid sequence <SEQ ID 2626; ORF
765.a>:
TABLE-US-03085 a765.pep 1 MLRCRPKSVL DSDGIFLKFN FLRSKPKYEI
SFLPSFKRIL CLSAVISVLG 51 ACTVVADVYG QDSATMNAAA AEDYMKTVEL
NKSAGNVDTT SKTARRVQAV 101 FRRMLPYADA ANNTGHKFDW KMTVFKNDEL
NAWAMPGGKM AFYTGIVDKL 151 KLTDGEIAAI MGHEMTHALH EHGKNKVGQK
ILTNMAAQIG TQIILDKKPD 201 TNPELVGLGM DILGMYGITL PYSRSLEEEA
DEGGMMLMAQ AGYHPAAAVR 251 VWEKMNQEND QNGFIYAITS THPTNNARIE
NLKRLLPTVM PVYEHSVRNK 301 GRVNKNRRR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 765
shows 96.18% identity over a 309 aa overlap with a predicted ORF
(ORF 765) from N. meningitidis:
TABLE-US-03086 m765/a765 96.1% identity in 309 aa overlap 10 20 30
40 50 60 m765.pep
MLRCRPKSVLDSDGIFLKFNFLRSKPKYEISFLPSFKRILCLSAVISVLGACAVVADVYG
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| a765
MLRCRPKSVLDSDGIFLKFNFLRSKPKYEISFLPSFKRILCLSAVISVLGACTVVADVYG 10 20
30 40 50 60 70 80 90 100 110 120 m765.pep
HDSATMNAAAAKDYMKTVELNKSAGNVDTTSRTARRVQAVFRRMLPYADAANNTSHKFDW
:||||||||||:|||||||||||||||||||:||||||||||||||||||||||:||||| a765
QDSATMNAAAAEDYMKTVELNKSAGNVDTTSKTARRVQAVFRRMLPYADAANNTGHKFDW 70 80
90 100 110 120 130 140 150 160 170 180 m765.pep
KMTVFKNDELNAWAMPGGKMAFYLGIVDKLKLTDDEIAAIMGHEMTHALHEHGKNKVGQQ
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||: a765
KMTVFKNDELNAWAMPGGKMAFYLGIVDKLKLTDGEIAAIMGHEMTHALHEHGKNKVGQK 130
140 150 160 170 180 190 200 210 220 230 240 m765.pep
ILTNTAAQIGTQIILDKKPDTNPELVGLGMDILGTYGLTLPYSRSLEEEADEGGMMLMAQ ||||
||||||||||||||||||||||||||||| ||:|||||||||||||||||||||| a765
ILTNMAAQIGTQIILDKKPDTNPELVGLGMDILGMYGITLPYSRSLEEEADEGGMMLMAQ 190
200 210 220 230 240 250 260 270 280 290 300 m765.pep
AGYHPAAAVRVWEKMNQENDQNGFIYAITSTHPTNNARIENLKRLLPTVMPVYEQSVRNK
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| a765
AGYHPAAAVRVWEKMNQENDQNGFIYAITSTHPTNNARIENLKRLLPTVMPVYEHSVRNK 250
260 270 280 290 300 310 m765.pep GRVNKKRRRX |||||:|||| a765
GRVNKNRRRX 310
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2627>:
TABLE-US-03087 g767.seq 1 ATGAAGTTTA AACATCTGTT GCCGCTGCTG
CTGTCGGCAG TGTTGTCCGC 51 GCAGGCATAT GCCCTGACGG AAGGGGAAGA
CTATCTTGTG TTGGATAAAC 101 CCATTCCTCA AGAACAGCCG GGAAAAATTG
AGGTTTTGGA ATTTTTCGGC 151 TATTTTTGCG TACATTGCCA TCATTTCGAT
CCTTTGTTAT TGAAACTGGG 201 CAAGGCATTG CCGTCTGATA CTTATCTGCG
GACGGAGCAC GTGGTCTGGC 251 GGCCTGAAAT GCTCGGTCTG GCAAGAATGG
CTGCTGCGGT CAAGCTGTCG 301 GGTTTGAAAT ATCAGGCAAA CTCTGCTGTG
TTTAAAGCAG TTTACGAACA 351 AAAAATCCGT TTGGAAAACA GGGCTGTTGC
CGGGAAATGG GCTTTATCTC 401 AAAAAGGTTT TGACGGCAAA AAACTGATGC
GCGCCTATGA TTCCCCCGAA 451 GCTGCCGCCG TCGCATTAAA AATGCAGAAA
CTGACGGAAC AATACGGTAT 501 TGACAGCACG CCGACCGTTA TTGTCGGCGG
AAAATACCGC GTTATCTTCA 551 ATAATGGCTT TGATGGCGGC GTTCATACGA
TTAAAGAATT GGTTGCCAAA 601 GTCAGGGAAG AACGCAAGCG TCAGACCCCT
GCTGTACAGA AATAG
This corresponds to the amino acid sequence <SEQ ID 2628; ORF
767.ng>:
TABLE-US-03088 g767.pep 1 MKFKHLLPLL LSAVLSAQAY ALTEGEDYLV
LDKPIPQEQP GKIEVLEFFG 51 YFCVHCHHFD PLLLKLGKAL PSDTYLRTEH
VVWRPEMLGL ARMAAAVKLS 101 GLKYQANSAV FKAVYEQKIR LENRAVAGKW
ALSQKGFDGK KLMRAYDSPE 151 AAAVALKMQK LTEQYGIDST PTVIVGGKYR
VIFNNGFDGG VHTIKELVAK 201 VREERKRQTP AVQK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2629>:
TABLE-US-03089 m767.seq 1 ATGAAGCTCA AACATCTGTT GCCGCTGCTG
CTGTCGGCAG TGTTGTCCGC 51 GCAGGCATAT GCCCTGACGG AAGGGGAAGA
CTATCTTGTG TTGGATAAAC 101 CCATTCCTCA AGAACAGTCG GGTAAAATTG
AGGTTTTGGA ATTTTTCGGC 151 TATTTCTGCG TACATTGCCA TCATTTCGAT
CCTTTGTTAT TGAAACTGGG 201 CAAGGCATTG CCGTCTGATG CCTATTTGAG
GACGGAGCAC GTGGTCTGGC 251 AGCCTGAAAT GCTCGGTTTG GCTAGGATGG
CGGCTGCCGT CAATTTGTCG 301 GGTTTGAAAT ATCAGGCAAA CCCTGCTGTG
TTTAAAGCAG TTTACGAACA 351 AAAAATCCGC TTGGAAAACA GGTCGGTTGC
CGGAAAATGG GCTTTGTCTC 401 AAAAAGGCTT TGACGGCAAA AAACTGATGC
GCGCCTATGA TTCCCCCGAA 451 GCTGCCGCCG CCGCATTAAA AATGCAGAAA
CTGACGGAAC AATACCGCAT 501 CGACAGCACG CCGACCGTTA TTGTCGGCGG
AAAATACCGC GTTATCTTCA 551 ATAACGGCTT TGACGGCGGC GTTCATACGA
TTAAAGAATT GGTTGCCAAA 601 GTCAGGGAAG AACGCAAGCG TCAGACCCCT
GCTGTACAGA AATAG
This corresponds to the amino acid sequence <SEQ ID 2630; ORF
767>:
TABLE-US-03090 m767.pep 1 MKLKHLLPLL LSAVLSAQAY ALTEGEDYLV
LDKPIPQEQS GKIEVLEFFG 51 YFCVHCHHFD PLLLKLGKAL PSDAYLRTEH
VVWQPEMLGL ARMAAAVNLS 101 GLKYQANPAV FKAVYEQKIR LENRSVAGKW
ALSQKGFDGK KLMRAYDSPE 151 AAAAALKMQK LTEQYRIDST PTVIVGGKYR
VIFNNGFDGG VHTIKELVAK 201 VREERKRQTP AVQK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 767
shows 95.8% identity over a 214 aa overlap with a predicted ORF
(ORF 767) from N. gonorrhoeae
TABLE-US-03091 m767/g767 95.8% identity in 214 aa overlap 10 20 30
40 50 60 g767.pep
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFD
||:|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| m767
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFD 10 20
30 40 50 60 70 80 90 100 110 120 g767.pep
PLLLKLGKALPSDTYLRTEHVVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIR
|||||||||||||:|||||||||:|||||||||||||:||||||||| |||||||||||| m767
PLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIR 70 80
90 100 110 120 130 140 150 160 170 180 g767.pep
LENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQKLTEQYGIDSTPTVIVGGKYR
||||:||||||||||||||||||||||||||||:||||||||||| |||||||||||||| m767
LENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIVGGKYR 130
140 150 160 170 180 190 200 210 g767.pep
VIFNNGFDGGVHTIKELVAKVREERKRQTPAVQKX
||||||||||||||||||||||||||||||||||| m767
VIFNNGFDGGVHTIKELVAKVREERKRQTPAVQKX 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2631>:
TABLE-US-03092 a767.seq 1 ATGAAGCTCA AACATCTGTT GCCGCTGCTG
CTGTCGGCAG TGTTGTCCGC 51 GCAGGCATAT GCCCTGACGG AAGGGGAAGA
CTATCTTGTG TTGGATAAAC 101 CCATTCCTCA AAAACAGTCG GGCAAAATTG
AGGTTTTGGA ATTTTTCGGC 151 TATTTCTGCG TACATTGCCA TCATTTCGAT
CCTTTGTTAT TGAAATTGGG 201 CAAGGCATTG CCGTCTGATG CCTATTTAAG
GACGGAGCAC GTGGTCTGGC 251 AGCCTGAAAT GCTCGGTCTG GCAAGAATGG
CTGCTGCGGT CAAGCTGTCA 301 GGTTTGAAAT ATCAGGCAAA CCCTGCCGTG
TTTAAAGCAG TTTACGAACA 351 AAAAATCCGC TTGGAAAACA GGTCGGTTGC
CGAAAAATGG GCTTTGTCTC 401 AAAAAGGCTT TGACGGCAAA AAACTGATGC
GCGCCTACGA CTCTCCTGCG 451 GCAGCGGCTG CTGCATCAAA AATGCAGCAA
TTGACGGAAC AGTACCGCAT 501 CGACAGTACG CCGACCGTTG TCGTCGGCGG
AAAATACCGC GTTATCTTCA 551 ATAATGGCTT TGACGGCGGT GTTCATACGA
TTAAAGAATT GGTTGCCAAA 601 GTCAGGGAAG AACGCAAGCG TCAGACCCCT
GCTGTACAGA AATAG
This corresponds to the amino acid sequence <SEQ ID 2632; ORF
767.a>:
TABLE-US-03093 a767.pep 1 MKLKHLLPLL LSAVLSAQAY ALTEGEDYLV
LDKPIPQKQS GKIEVLEFFG 51 YFCVHCHHFD PLLLKLGKAL PSDAYLRTEH
VVWQPEMLGL ARMAAAVKLS 101 GLKYQANPAV FKAVYEQKIR LENRSVAEKW
ALSQKGFDGK KLMRAYDSPA 151 AAAAASKMQQ LTEQYRIDST PTVVVGGKYR
VIFNNGFDGG VHTIKELVAK 201 VREERKRQTP AVQK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 767
shows 96.7% identity over a 214 aa overlap with a predicted ORF
(ORF 767) from N. meningitidis:
TABLE-US-03094 m767/a767 96.7% identity in 214 aa overlap 10 20 30
40 50 60 a767.pep
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFD
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| m767
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFD 10 20
30 40 50 60 70 80 90 100 110 120 a767.pep
PLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIR
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| m767
PLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIR 70 80
90 100 110 120 130 140 150 160 170 180 a767.pep
LENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQLTEQYRIDSTPTVVVGGKYR
||||||| ||||||||||||||||||||| ||||| |||:|||||||||||||:|||||| m767
LENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIVGGKYR 130
140 150 160 170 180 190 200 210 a767.pep
VIFNNGFDGGVHTIKELVAKVREERKRQTPAVQKX
||||||||||||||||||||||||||||||||||| m767
VIFNNGFDGGVHTIKELVAKVREERKRQTPAVQKX 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2633>:
TABLE-US-03095 g768.seq 1 ATGAATATCA AACAATTGAT TACCGCCGCA
CTCATTGCCT CAGCCGCCTT 51 TGCCACGCAG GCAGCCCCGC AAAAACCCGT
ATCCGCCGCC CAAACCGCGC 101 AACATTCAGC CGTTTGGATC GATGTCCGTT
CCGAACAGGA ATTTAGCGAA 151 GGTCATTTGC ACAACGCGGT CAACATCCCC
GTCGACCAAA TCGTCCGCCG 201 CATATACGAA GCCGCGCCCG ACAAAGACAC
GCCGGTCAAC CTCTACTGCC 251 GCAGCGGACG GCGTGCCGAA GCCGCCCTTC
AAGAGCTGAA AAAAGCAGGT 301 TATACAAATG TTGCCAATCA CGGCGGTTAT
GAAGACCTGC TCAAAAAAGG 351 GATGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2634; ORF
768.ng>:
TABLE-US-03096 g768.pep 1 MNIKQLITAA LIASAAFATQ AAPQKPVSAA
QTAQHSAVWI DVRSEQEFSE 51 GHLHNAVNIP VDQIVRRIYE AAPDKDTPVN
LYCRSGRRAE AALQELKKAG 101 YTNVANHGGY EDLLKKGMK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2635>:
TABLE-US-03097 m768.seq 1 ATGAATATCA AACACCTGAT TACCGCCGCA
CTCATTGCCT CAGCCGCCTT 51 TGCCGCGCAG GCAGCCCCGC AAAAACCCGT
ATCCGCCGCC CAAACCGCGC 101 AACATCCGGC CGTTTGGATC GATGTCCGTT
CCGAACAGGA ATTTAGCGAA 151 GGGCATTTGC ACAACGCGGT CAACATCCCC
GTCGACCAAA TCGTCCGCCG 201 CATACACGAA GCCGCGCCCG ACAAAGACAC
GCCGGTCAAC CTCTACTGCC 251 GCAGCGGACG GCGTGCCGAA GCCGCCCTTC
AAGAGCTGAA AAAAGCAGGT 301 TATACAAATG TTGCCAATCA CGGCGGTTAT
GAAGACCTGC TCAAAAAAGG 351 GATGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2636; ORF
768>:
TABLE-US-03098 m768.pep 1 MNIKHLITAA LIASAAFAAQ AAPQKPVSAA
QTAQHPAVWI DVRSEQEFSE 51 GHLHNAVNIP VDQIVRRIHE AAPDKDTPVN
LYCRSGRRAE AALQELKKAG 101 YTNVANHGGY EDLLKKGMK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 768
shows 96.6% identity over a 119 aa overlap with a predicted ORF
(ORF 768) from N. gonorrhoeae
TABLE-US-03099 m768/g768 96.6% identity in 119 aa overlap 10 20 30
40 50 60 g768.pep
MNIKQLITAALIASAAFATQAAPQKPVSAAQTAQHSAVWIDVRSEQEFSEGHLHNAVNIP
||||:|||||||||||||:|||||||||||||||| |||||||||||||||||||||||| m768
MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRSEQEFSEGHLHNAVNIP 10 20
30 40 50 60 70 80 90 100 110 120 g768.pep
VDQIVRRIYEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYTNVANHGGYEDLLKKGMKX
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| m768
VDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYTNVANHGGYEDLLKKGMKX 70 80
90 100 110 120
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2637>:
TABLE-US-03100 a768.seq 1 ATGAATATCA AACACCTGAT TACCGCCGCA
CTCATTGCCT CAGCCGCCTT 51 TGCCGCGCAG GCAGCCCCGC AAAAACCCGT
ATCCGCCGCC CAAACCGCGC 101 AACATTCAGC CGTTTGGATC GATGTCCGCA
GCGAACAGGA ATTTAGCGAA 151 GGTCATTTGC ACAACGCGGT CAACATCCCC
GTCGACCAAA TCGTCCGCCG 201 CATACACGAA GCCGCGCCCG ACAAAGACAC
GCCGGTCAAC CTCTACTGCC 251 GCAGCGGACG GCGTGCCGAA GCCGCCCTTC
AAGAACTGAA AAAAGCAGGC 301 TATACGAATG TTGCCAATCA CGGCGGTTAT
GAAGACCTGC TCAAAAAAGG 351 GATGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2638; ORF
768.a>:
TABLE-US-03101 a768.pep 1 MNIKHLITAA LIASAAFAAQ AAPQKPVSAA
QTAQHSAVWI DVRSEQEFSE 51 GHLHNAVNIP VDQIVRRIHE AAPDKDTPVN
LYCRSGRRAE AALQELKKAG 101 YTNVANHGGY EDLLKKGMK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N meningitidis ORF 768
shows 99.2% identity over a 119 aa overlap with a predicted ORF
(ORF 768) from N. meningitidis:
TABLE-US-03102 m768/a768 99.2% identity in 119 aa overlap 10 20 30
40 50 60 a768.pep
MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHSAVWIDVRSEQEFSEGHLHNAVNIP
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| m768
MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRSEQEFSEGHLHNAVNIP 10 20
30 40 50 60 70 80 90 100 110 120 a768.pep
VDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYTNVANHGGYEDLLKKGMKX
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m768
VDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYTNVANHGGYEDLLKKGMKX 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2639>:
TABLE-US-03103 g769.seq 1 TTGATAATGG TTATTTTTTA TTTTTATTTT
TGTGGGAAGA CATTTATGCC 51 TGCACGAAAC AGATGGATGC TGCTGCCTTT
ATTGGCAAGC GCGGCATACG 101 CCGAAgaAAC ACCgtgCGAA CCGGATTTGA
GAAGCCGTCC CGAGTTCAGG 151 CTTCATGAAG CGGAGGTCAA ACCGATCGAC
AGGGAGAAGG TACCGGGGCA 201 GGTGCGGGAA AAAGGAAAAG TTTTGCAGGT
TGACGgcGAA ACCCTGCTGA 251 AAAATCCCGA ATTGTTGTCG CGTGCCATGT
ATTCCGCAGT GGTCTCAAAC 301 AATATTGCCG GTATCCGCGT GATTTTGCCG
ATTTACCTAC AACAGGCGCG 351 GCAGGATAAG ATGTTGGCAC TTTATGCACA
AGGGATTTTG GCGCAGGCAG 401 AGGGCAGGGT GAAGGAGGCG GTTTCCCATT
ACCGGGAATT GATTGCCGCC 451 CAACCCGACG CGCCCGCCGT CCGTATGCGT
TTGGCGGCGG CATTGTTTGA 501 AGACAGGCAG AACGAGGCGG CGGCAGACCA
GTTCGACCGC CTGAAAACAG 551 AAGATCTGCC GCCGCAGCTT ATGGAGCAGG
TCGAGCTGTA CCGCAAGGCA 601 TTGCGCGAAC GCGATGCGTG GAAGGTAAAC
GGCGGTTTCA GCGTTACCCG 651 CGAACACAAT ATCAACCAAG CCCCGAAACA
GCAGCAGTAC GGCAATTGGA 701 CTTTCCCGAA ACAGGTGGAC GGCACGGCAG
TCAATTACCG GTTCGGCGCG 751 GAGAAAAAAT GGTCGCTGAA AAACGGCTGG
TACACGACGG CGGGCGGCGA 801 CGTGTCCGGC AGGGTTTATC CGGGGAATAA
GAAATTCAAC GATATGACGG 851 CAGGTGTTTC CGGCGGCATC GGTTTTGCCG
ACCGGCGTAA AGATGTCGGG 901 CTGGCAGTGT TCCACGAACG CCGCACCTAC
GGCAACGACG CTTATTCTTA 951 CGCCAACGGC GCACGCCTTT ATTTCAACCG
TTGGCAAACC CCGAGATGGC 1001 AAACGCTGTC TTCGGCGGAG TGGGGGCGTT
TGAAGAATAC GCGCCGGGCG 1051 CGTTCCGACA ATACCCATTT GCAAATTTCC
AATTCGCTGG TGTTTTACCG 1101 GAATGCGCGC CAATATTGGA CGGGCGGTTT
GGATTTTTAC CGCGAGCGCA 1151 ACCCCGCCGA CCGTGGCGAC AATTTCAACC
GTTACGGCCT GCGCTTTGCC 1201 TGGGGGCAGG AATGGGGCGG CAGCGGCCTG
TCTTCGCTGT TCCGCCTCGG 1251 CGTGGCGAAA CGGCATTATG AAAAACCCGG
CTTCTTCAGC AGTTTTAAAG 1301 GGGAAAGGCG CAGGGATAAA GAATCGGACA
CATCCTTGAG CCTTTGGCAC 1351 CGGGCATTGC ATTTCAAAGG CATCACGCCG
CGCCTGACGC TGTCGCACCG 1401 CGAAACGTGG AGCAACGATG TGTTTAACGA
ATACGAGAAA AACAGGGCGT 1451 TTGTCGAGTT TAACAAAACG TTCTGA
This corresponds to the amino acid sequence <SEQ ID 2640; ORF
769.ng>:
TABLE-US-03104 g769.pep 1 LIMVIFYFYF CGKTFMPARN RWMLLPLLAS
AAYAEETPCE PDLRSRPEFR 51 LHEAEVKPID REKVPGQVRE KGKVLQVDGE
TLLKNPELLS RAMYSAVVSN 101 NIAGIRVILP IYLQQARQDK MLALYAQGIL
AQAEGRVKEA VSHYRELIAA 151 QPDAPAVRMR LAAALFEDRQ NEAAADQFDR
LKTEDLPPQL MEQVELYRKA 201 LRERDAWKVN GGFSVTREHN INQAPKQQQY
GNWTFPKQVD GTAVNYRFGA 251 EKKWSLKNGW YTTAGGDVSG RVYPGNKKFN
DMTAGVSGGI GFADRRKDVG 301 LAVFHERRTY GNDAYSYANG ARLYFNRWQT
PRWQTLSSAE WGRLKNTRRA 351 RSDNTHLQIS NSLVFYRNAR QYWTGGLDFY
RERNPADRGD NFNRYGLRFA 401 WGQEWGGSGL SSLFRLGVAK RHYEKPGFFS
SFKGERRRDK ESDTSLSLWH 451 RALHFKGITP RLTLSHRETW SNDVFNEYEK
NRAFVEFNKT F*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2641>:
TABLE-US-03105 m769.seq 1 TTGATAATGG TTATTTTTTA TTTTTGTGGG
AAGACATTTA TGCCTGCACG 51 AAACAGATGG ATGCTGCTGC TGCCTTTATT
GGCAAGCGCG GCATATGCCG 101 AAGAAACACC GCGCGAACCG GATTTGAGAA
GCCGTCCCGA GTTCAGGCTT 151 CATGAAGCGG AGGTCAAACC GATCGACAGG
GAGAAGGTGC CGGGGCAGGT 201 GCGGGAAAAA GGAAAAGTTT TGCAGATTGA
CGGCGAAACC CTGCTGAAAA 251 ATCCCGAATT GTTGTCCCGC GCGATGTATT
CCGCAGTGGT CTCAAACAAT 301 ATTGCCGGTA TCCGCGTTAT TTTGCCGATT
TACCTACAAC AGGCGCAGCA 351 GGATAAGATG TTGGCACTTT ATGCACAAGG
GATTTTGGCG CAGGCAGACG 401 GTAGGGTGAA GGAGGCGATT TCCCATTACC
GGGAATTGAT TGCCGCCCAA 451 CCCGACGCGC CCGCCGTCCG TATGCGTTTG
GCGGCAGCAT TGTTTGAAAA 501 CAGGCAGAAC GAGGCGGCGG CAGACCAGTT
CGACCGCCTG AAGGCGGAAA 551 ACCTGCCGCC GCAGCTGATG GAGCAGGTCG
AGCTGTACCG CAAGGCATTG 601 CGCGAACGCG ATGCGTGGAA GGTAAATGGC
GGCTTCAGCG TCACCCGCGA 651 ACACAATATC AACCAAGCCC CGAAACGGCA
GCAGTACGGC AAATGGACTT 701 TCCCGAAACA GGTGGACGGC ACGGCGGTCA
ATTACCGGCT CGGCGCGGAG 751 AAAAAATGGT CGCTGAAAAA CGGCTGGTAC
ACGACGGCGG GCGGCGACGT 801 GTCCGGCAGG GTTTATCCGG GGAATAAGAA
ATTCAACGAT ATGACGGCAG 851 GCGTTTCCGG CGGCATCGGT TTTGCCGACC
GGCGCAAAGA TGCCGGGCTG 901 GCAGTGTTCC ACGAACGCCG CACCTACGGC
AACGACGCTT ATTCTTACAC 951 CAACGGCGCA CGCCTTTATT TCAACCGTTG
GCAAACCCCG AAATGGCAAA 1001 CGTTGTCTTC GGCGGAGTGG GGGCGTTTGA
AGAATACGCG CCGGGCGCGT 1051 TCCGACAATA CCCATTTGCA AATTTCCAAT
TCGCTGGTGT TTTACCGGAA 1101 TGCGCGCCAA TATTGGATGG GCGGTTTGGA
TTTTTACCGC GAGCGCAACC 1151 CCGCCGACCG GGGCGACAAT TTCAACCGTT
ACGGCCTGCG CTTTGCCTGG 1201 GGGCAGGAAT GGGGCGGCAG CGGCCTGTCT
TCGCTGTTGC GCCTCGGCGC 1251 GGCGAAACGG CATTATGAAA AACCCGGCTT
TTTCAGCGGT TTTAAAGGGG 1301 AAAGGCGCAG GGATAAAGAA TTGAACACAT
CCTTGAGCCT TTGGCACCGG 1351 GCATTGCATT TCAAAGGCAT CACGCCGCGC
CTGACGTTGT CGCACCGCGA 1401 AACGCGGAGT AACGATGTGT TCAACGAATA
CGAGAAAAAT CGGGCGTTTG 1451 TCGAGTTTAA TAAAACGTTC TGA
This corresponds to the amino acid sequence <SEQ ID 2642; ORF
769>:
TABLE-US-03106 m769.pep 1 LIMVIFYFCG KTFMPARNRW MLLLPLLASA
AYAEETPREP DLRSRPEFRL 51 HEAEVKPIDR EKVPGQVREK GKVLQIDGET
LLKNPELLSR AMYSAVVSNN 101 IAGIRVILPI YLQQAQQDKM LALYAQGILA
QADGRVKEAI SHYRELIAAQ 151 PDAPAVRMRL AAALFENRQN EAAADQFDRL
KAENLPPQLM EQVELYRKAL 201 RERDAWKVNG GFSVTREHNI NQAPKRQQYG
KWTFPKQVDG TAVNYRLGAE 251 KKWSLKNGWY TTAGGDVSGR VYPGNKKFND
MTAGVSGGIG FADRRKDAGL 301 AVFHERRTYG NDAYSYTNGA RLYFNRWQTP
KWQTLSSAEW GRLKNTRRAR 351 SDNTHLQISN SLVFYRNARQ YWMGGLDFYR
ERNPADRGDN FNRYGLRFAW 401 GQEWGGSGLS SLLRLGAAKR HYEKPGFFSG
FKGERRRDKE LNTSLSLWHR 451 ALHFKGITPR LTLSHRETRS NDVFNEYEKN
RAFVEFNKTF *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 769
shows 95.1% identity over a 492 aa overlap with a predicted ORF
(ORF 769) from N. gonorrhoeae
TABLE-US-03107 m769/g769 95.1% identity in 492 aa overlap 10 20 30
40 50 59 g769.pep
LIMVIFYFYFCGKTFMPARNRWMLL-PLLASAAYAEETPCEPDLRSRPEFRLHEAEVKPI
||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| m769
LIMVIFY--FCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRPEFRLHEAEVKPI 10 20
30 40 50 60 70 80 90 100 110 119 g769.pep
DREKVPGQVREKGKVLQVDGETLLKNPELLSRAMYSAVVSNNIAGIRVILPIYLQQARQD
|||||||||||||||||:|||||||||||||||||||||||||||||||||||||||:|| m769
DREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGIRVILPIYLQQAQQD 60 70
80 90 100 110 120 130 140 150 160 170 179 g769.pep
KMLALYAQGILAQAEGRVKEAVSHYRELIAAQPDAPAVRMRLAAALFEDRQNEAAADQFD
||||||||||||||:||||||:||||||||||||||||||||||||||:||||||||||| m769
KMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAAALFENRQNEAAADQFD 120
130 140 150 160 170 180 190 200 210 220 230 239 g769.pep
RLKTEDLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNINQAPKQQQYGNWTFPKQV
|||:|:|||||||||||||||||||||||||||||||||||||||||:||||:||||||| m769
RLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNINQAPKRQQYGKWTFPKQV 180
190 200 210 220 230 240 250 260 270 280 290 299 g769.pep
DGTAVNYRFGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFNDMTAGVSGGIGFADRRKDV
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||: m769
DGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFNDMTAGVSGG IGFADRRKDA 240
250 260 270 280 290 300 310 320 330 340 350 359 g769.pep
GLAVFHERRTYGNDAYSYANGARLYFNRWQTPRWQTLSSAEWGRLKNTRRARSDNTHLQI
||||||||||||||||||:|||||||||||||:||||||||||||||||||||||||||| m769
GLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLSSAEWGRLKNTRRARSDNTHLQI 300
310 320 330 340 350 360 370 380 390 400 410 419 g769.pep
SNSLVFYRNARQYWTGGLDFYRERNPADRGDNFNRYGLRFAWGQEWGGSGLSSLFRLGVA
|||||||||||||| |||||||||||||||||||||||||||||||||||||||:|||:| m769
SNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRYGLRFAWGQEWGGSGLSSLLRLGAA 360
370 380 390 400 410 420 430 440 450 460 470 479 g769.pep
KRHYEKPGFFSSFKGERRRDKESDTSLSLWHRALHFKGITPRLTLSHRETWSNDVFNEYE
|||||||||||:|||||||||| :|||||||||||||||||||||||||| ||||||||| m769
KRHYEKPGFFSGFKGERRRDKELNTSLSLWHRALHFKGITPRLTLSHRETRSNDVFNEYE 420
430 440 450 460 470 480 490 g769.pep KNRAFVEFNKTFX |||||||||||||
m769 KNRAFVEFNKTFX 490
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2643>:
TABLE-US-03108 a769.seq 1 TTGATAATGG TTATTTTTTA TTTTTGTGGG
AAGACATTTA TGCCTGCACG 51 AAACAGATGG ATGCTGCTGC TGCCTTTATT
GGCAAGCGCG GCATATGCCG 101 AAGAAACACC GCGCGAACCG GATTTGAGAA
GCCGTCCCGA GTTCAGGCTT 151 CATGAAGCGG AGGTCAAACC AATCGACAGG
GAGAAGGTAC CGGGGCAGGT 201 GCGGGAAAAA GGAAAAGTTT TGCAGATTGA
CGGCGAAACC CTGCTGAAAA 251 ATCCCGAATT GCTGTCCCGC GCGATGTATT
CCGCAGTGGT CTCAAACAAT 301 ATTGCCGGTA TCCGCGTTAT TTTGCCGATT
TACCTACAAC AGGCGCAGCA 351 GGATAAGATG TTGGCACTTT ATGCACAAGG
GATTTTGGCG CAGGCAGACG 401 GTAGGGTGAA GGAGGCGATT TCCCATTACC
GGGAATTGAT TGTCGCCCAA 451 CCCGACGCGC CCGCCGTCCG TATGCGTTTG
GCGGCGGCAT TGTTTGAAAA 501 CAGGCAGAAC GAGGCGGCGG CAGACCAGTT
CGACCGCCTG AAGGCGGAAA 551 ACCTGCCGCC GCAGCTGATG GAGCAGGTCG
AGCTGTACCG CAAGGCATTG 601 CGCGAACGCG ATGCGTGGAA GGTAAATGGC
GGCTTCAGCG TTACCCGCGA 651 ACACAATATC AACCAAGCCC CGAAACGGCA
GCAGTACGGC AAATGGACTT 701 TCCCGAAACA GGTGGACGGC ACGGCGGTCA
ATTACCGGCT CGGCGCGGAG 751 AAAAAATGGT CGCTGAAAAA CGGCTGGTAC
ACGACGGCGG GCGGCGACGT 801 GTCCGGCAGG GTTTATCCGG GGAATAAGAA
ATTCAACGAT ATGACGGCAG 851 GCGTTTCCGG CGGCATCGGT TTTGCCGACC
GGCGCAAAGA TGCCGGGCTG 901 GCAGTGTTCC ACGAACGCCG CACCTACGGC
AACGACGCTT ATTCTTACAC 951 CAACGGCGCA CGCCTTTATT TCAACCGTTG
GCAAACCCCG AAATGGCAAA 1001 CGTTGTCTTC GGCGGAGTGG GGGCGTTTGA
AGAATACGCG CCGGGCGCGT 1051 TCCGACAATA CCCATTTGCA AATTTCCAAT
TCGCTGGTGT TTTACCGGAA 1101 TGCGCGCCAA TATTGGATGG GCGGTTTGGA
TTTTTACCGC GAGCGCAACC 1151 CCGCCGACCG GGGCGACAAT TTCAACCGTT
ACGGCCTGCG CTTTGCCTGG 1201 GGGCAGGAAT GGGGCGGCAG CGGCCTGTCT
TCGCTGTTGC GCCTCGGCGC 1251 GGCGAAACGG CATTATGAAA AACCCGGCTT
TTTCAGCGGT TTTAAAGGGG 1301 AAAGGCGCAG GGATAAAGAA TTGAACACAT
CCTTGAGCCT TTGGCACCGG 1351 GCATTGCATT TCAAAGGCAT CACGCCGCGC
CTGACGTTGT CGCACCGCGA 1401 AACGCGGAGT AACGATGTGT TCAACGAATA
CGAGAAAAAT CGGGCGTTTG 1451 TCGAGTTTAA TAAAACGTTC TGA
This corresponds to the amino acid sequence <SEQ ID 2644; ORF
769.a>:
TABLE-US-03109 a769.pep 1 LIMVIFYFCG KTFMPARNRW MLLLPLLASA
AYAEETPREP DLRSRPEFRL 51 HEAEVKPIDR EKVPGQVREK GKVLQIDGET
LLKNPELLSR AMYSAVVSNN 101 IAGIRVILPI YLQQAQQDKM LALYAQGILA
QADGRVKEAI SHYRELIVAQ 151 PDAPAVRMRL AAALFENRQN EAAADQFDRL
KAENLPPQLM EQVELYRKAL 201 RERDAWKVNG GFSVTREHNI NQAPKRQQYG
KWTFPKQVDG TAVNYRLGAE 251 KKWSLKNGWY TTAGGDVSGR VYPGNKKFND
MTAGVSGGIG FADRRKDAGL 301 AVFHERRTYG NDAYSYTNGA RLYFNRWQTP
KWQTLSSAEW GRLKNTRRAR 351 SDNTHLQISN SLVFYRNARQ YWMGGLDFYR
ERNPADRGDN FNRYGLRFAW 401 GQEWGGSGLS SLLRLGAAKR HYEKPGFFSG
FKGERRRDKE LNTSLSLWHR 451 ALHFKGITPR LTLSHRETRS NDVFNEYEKN
RAFVEFNKTF *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 769
shows 99.8% identity over a 490 aa overlap with a predicted ORF
(ORF 769) from N. meningitidis:
TABLE-US-03110 m769/a769 99.8% identity in 490 aa overlap 10 20 30
40 50 60 a769.pep
LIMVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRPEFRLHEAEVKPIDR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
LIMVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRPEFRLHEAEVKPIDR 10 20
30 40 50 60 70 80 90 100 110 120 a769.pep
EKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGIRVILPIYLQQAQQDKM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
EKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGIRVILPIYLQQAQQDKM 70 80
90 100 110 120 130 140 150 160 170 180 a769.pep
LALYAQGILAQADGRVKEAISHYRELIVAQPDAPAVRMRLAAALFENRQNEAAADQFDRL
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| m769
LALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAAALFENRQNEAAADQFDRL 130
140 150 160 170 180 190 200 210 220 230 240 a769.pep
KAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNINQAPKRQQYGKWTFPKQVDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
KAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNINQAPKRQQYGKWTFPKQVDG 190
200 210 220 230 240 250 260 270 280 290 300 a769.pep
TAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFNDMTAGVSGGIGFADRRKDAGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
TAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFNDMTAGVSGGIGFADRRKDAGL 250
260 270 280 290 300 310 320 330 340 350 360 a769.pep
AVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLSSAEWGRLKNTRRARSDNTHLQISN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
AVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLSSAEWGRLKNTRRARSDNTHLQISN 310
320 330 340 350 360 370 380 390 400 410 420 a769.pep
SLVFYRNARQYWMGGLDFYRERNPADRGDNFNRYGLRFAWGQEWGGSGLSSLLRLGAAKR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
SLVFYRNARQYWMGGLDFYRERNPADRGDNFNRYGLRFAWGQEWGGSGLSSLLRLGAAKR 370
380 390 400 410 420 430 440 450 460 470 480 a769.pep
HYEKPGFFSGFKGERRRDKELNTSLSLWHRALHFKGITPRLTLSHRETRSNDVFNEYEKN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m769
HYEKPGFFSGFKGERRRDKELNTSLSLWHRALHFKGITPRLTLSHRETRSNDVFNEYEKN 430
440 450 460 470 480 490 a769.pep RAFVEFNKTFX ||||||||||| m769
RAFVEFNKTFX 490
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2645>:
TABLE-US-03111 g770.seq 1 ATGAACAGAC TGCTACTGCT GTCTGCCGCC
GTCCTGCCGA CTGCCTGCGG 51 CAGCGGCGAA ACCGATAAAA TCGGACGGGC
AAGTACCGTT TTCAACATGT 101 TGGGCAAAAA CGACCGTATC GAAGTGGAAG
GATTCGACGA TCCCGACGTT 151 CAAGGGGTTG CCTGTTATAT TTCGTATGCA
AAAAAAGGCG GCTTGAAGGA 201 AATGGTCAAT TTGGAAGAGG ACGCGTCCGA
CGCATCGGTT TCGTGCGTTC 251 AGACGGCATC TTCGATTTCT TTTGACGAAA
CCGCCGTGCG CAAACCGAAA 301 GAAGTTTTCA AGCGCGGTAC GGGCTTCGCG
TTCAAGAGCC GGCAGATTGT 351 CCGTTATTAC GACCCCAAAC GCAAAGCCTT
CGCCTATTTG GTTTACAGCG 401 ATAAAATCGT CCAAGGATCG CCGAAAAATT
CCTTAAGCGC GGTTTCCTGT 451 TTCGGCAGCG GCATACCGCA AACCGACGGG
GTGCAAGCCG ATACTTCCGG 501 CAAACTGCTT GCCGGCGCCT GCATTATTTC
CAACCCGATA AAAAATCCCG 551 ACAAACGCTG A
This corresponds to the amino acid sequence <SEQ ID 2646; ORF
770.ng>:
TABLE-US-03112 g770.pep 1 MNRLLLLSAA VLPTACGSGE TDKIGRASTV
FNMLGKNDRI EVEGFDDPDV 51 QGVACYISYA KKGGLKEMVN LEEDASDASV
SCVQTASSIS FDETAVRKPK 101 EVFKRGTGFA FKSRQIVRYY DPKRKAFAYL
VYSDKIVQGS PKNSLSAVSC 151 FGSGIPQTDG VQADTSGKLL AGACIISNPI
KNPDKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2647>:
TABLE-US-03113 m770.seq 1 ATGAACAGAC TGCTACTGCT GTCTGCCGCC
GTCCTGCTGA CTGCCTGCGG 51 CAGCGGCGAA ACCGATAAAA TCGGACGGGC
AAGTACCGTT TTCAACATAC 101 TGGGCAAAAA CGACCGTATC GAAGTGGAAG
GATTCGACGA TCCCGACGTT 151 CAAGGGGTTG CCTGTTATAT TTCGTATGCA
AAAAAAGGCG GCTTGAAGGA 201 AATGGTCAAT TTGGAAGAGG ACGCGTCCGA
CGCATCGGTT TCGTGCGTTC 251 AGACGGCATC TTCGATTTCT TTTGACGAAA
CCGCCGTGCG CAAACCGAAA 301 GAAGTTTTCA AACACGGTGC GAGCTTCGCG
TTCAAGAGCC GGCAGATTGT 351 CCGTTATTAC GACCCCAAAC GCAAAACCTT
CGCCTATTTG GTGTACAGCG 401 ATAAAATCAT CCAAGGCTCG CCGAAAAATT
CCTTAAGCGC GGTTTCCTGT 451 TTCGGCGGCG GCATACCGCA AACCGATGGG
GTGCAAGCCG ATACTTCCGG 501 CAACCTGCTT GCCGGCGCCT GCATGATTTC
CAACCCGATA GAAAATCTCG 551 ACAAACGCTG A
This corresponds to the amino acid sequence <SEQ ID 2648; ORF
770>:
TABLE-US-03114 m770.pep 1 MNRLLLLSAA VLLTACGSGE TDKIGRASTV
FNILGKNDRI EVEGFDDPDV 51 QGVACYISYA KKGGLKEMVN LEEDASDASV
SCVQTASSIS FDETAVRKPK 101 EVFKHGASFA FKSRQIVRYY DPKRKTFAYL
VYSDKIIQGS PKNSLSAVSC 151 FGGGIPQTDG VQADTSGNLL AGACMISNPI
ENLDKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 770
shows 93.5% identity over a 186 aa overlap with a predicted ORF
(ORF 770) from N. gonorrhoeae
TABLE-US-03115 m770/g770 93.5% identity in 186 aa overlap 10 20 30
40 50 60 g770.pep
MNRLLLLSAAVLPTACGSGETDKIGRASTVFNMLGKNDRIEVEGFDDPDVQGVACYISYA
|||||||||||| |||||||||||||||||||:||||||||||||||||||||||||||| m770
MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEGFDDPDVQGVACYISYA 10 20
30 40 50 60 70 80 90 100 110 120 g770.pep
KKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEVFKRGTGFAFKSRQIVRYY
||||||||||||||||||||||||||||||||||||||||||||:|::|||||||||||| m770
KKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEVFKHGASFAFKSRQIVRYY 70 80
90 100 110 120 130 140 150 160 170 180 g770.pep
DPKRKAFAYLVYSDKIVQGSPKNSLSAVSCFGSGIPQTDGVQADTSGKLLAGACIISNPI
|||||:||||||||||:|||||||||||||||:||||||||||||||:||||||:||||| m770
DPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDGVQADTSGNLLAGACMISNPI 130
140 150 160 170 180 g770.pep KNPDKRX :| |||| m770 ENLDKRX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2649>:
TABLE-US-03116 a770.seq 1 ATGAACAGAC TGCTACTGCT GTCTGCCGCC
GTCCTGCTGA CTGCCTGCGG 51 CAGCGGCGAA ACCGATAAAA TCGGACGGGC
AAGTACCGTT TTCAACATAC 101 TGGGCAAAAA CGACCGTATC GAAGTGGAAG
GATTCGACGA TCCCGACGTT 151 CAAGGGGTTG CCTGTTATAT TTCGTATGCA
AAAAAAGGCG GCTTGAAGGA 201 AATGGTCAAT TTGGAAGAGG ACGCGTCCGA
CGCATCGGTT TCGTGCGTTC 251 AGACGGCATC TTCGATTTCT TTTGACGAAA
CCGCCGTGCG CAAACCGAAA 301 GAAGTTTTCA AACACGGTGC GAGCTTCGCG
TTCAAGAGCC GGCAGATTGT 351 CCGTTATTAC GACCCCAAAC GCAAAACCTT
CGCCTATTTG GTGTACAGCG 401 ATAAAATCAT CCAAGGCTCG CCGAAAAATT
CCTTAAGCGC GGTTTCCTGT 451 TTCGGCGGCG GCATACCGCA AACCGATGGG
GTGCAAGCCG ATACTTCCGG 501 CAACCTGCTT GCCGGCGCCT GCATGATTTC
CAACCCGATA GAAAATCCCG 551 ACAAACGCTG A
This corresponds to the amino acid sequence <SEQ ID 2650; ORF
770.a>:
TABLE-US-03117 a770.pep 1 MNRLLLLSAA VLLTACGSGE TDKIGRASTV
FNILGKNDRI EVEGFDDPDV 51 QGVACYISYA KKGGLKEMVN LEEDASDASV
SCVQTASSIS FDETAVRKPK 101 EVFKHGASFA FKSRQIVRYY DPKRKTFAYL
VYSDKIIQGS PKNSLSAVSC 151 FGGGIPQTDG VQADTSGNLL AGACMISNPI
ENPDKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 770
shows 99.5% identity over a 186 aa overlap with a predicted ORF
(ORF 770) from N. meningitidis:
TABLE-US-03118 m770/a770 99.5% identity in 186 aa overlap 10 20 30
40 50 60 a770.pep
MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEGFDDPDVQGVACYISYA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m770
MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEGFDDPDVQGVACYISYA 10 20
30 40 50 60 70 80 90 100 110 120 a770.pep
KKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEVFKHGASFAFKSRQIVRYY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m770
KKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEVFKHGASFAFKSRQIVRYY 70 80
90 100 110 120 130 140 150 160 170 180 a770.pep
DPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDGVQADTSGNLLAGACMISNPI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m770
DPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDGVQADTSGNLLAGACMISNPI 130
140 150 160 170 180 a770.pep ENPDKRX || |||| m770 ENLDKRX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2651>:
TABLE-US-03119 g771.seq 1 ATGGATTTAT TATCGGTTTT CCACAAATAC
CGTCTGAAAT ATGCGGTGGC 51 GGTGCTGACG ATGCTGCTTT TGGCGGCAGT
CGGGCTGCAC GCTTCCGTAT 101 ATCGCACCTT CACGCCCGAA AACATCCGCA
GCCGCCTCCA ACAAAGCATT 151 GCCCATACCC ACCGGAAAAT CTCGTTTGAT
GCGGATATAC GGCGCAGGCT 201 TCTGCCCCGC CCGACCGTCA TCCTGAAAAA
CCTGACCATT ACCGAACCCG 251 ACGGCGGCCG GGTCGCCGTT TCCGTCAAAG
AAACCAAAAT CGGATTGAGC 301 TGGAAAAACC TGTGGTCGGA TCGGATACAG
GTTGAAAAAT GGGTGGTTTC 351 GGGTGCGGAT CTTGCCCTGA CGCGCGACAG
AAACGGCGCT TGGAACATCC 401 AAGACCTGTT CGACGGCGCG AAACACTCCG
CCTCAGTCAA CCGCATTATC 451 GTCGAAAACA GCACCGTCCG CCTCAATTTC
CTGCAGCAAC AGCTTATCCT 501 GAAGGAAATC AGCCTCAACC TGCAATCCCC
CGATTCGTCG GGGCAGCAGT 551 TTGAAAGTTC GGGCATACTG GTTTGGAGAA
AGCTGTCCGT CCCGTGGAAA 601 AGCAGGGGGC TGTTCCTTTC AGACGGCATC
GGCACGCCCG AAATCTCACC 651 GTTCCATTTT GAAGCTTCCA CTTCGCTGGA
CGGACACGGC ATCACCATTT 701 CCACCACCGG CAGCCCTTCT GTCCGCTTCA
ACGCCGGCGG AGCGGATGCC 751 GCCGGCCTCG GCCTGCGTGC AGACACTTCC
TTCCGCAACC TCCACCTGAC 801 CGCGCAAATC CCCGCACTGG CACTCAAAAA
CAACAGCATC AAAACCGGCA 851 CGGTCAACGG CACGTTTACC GCCGGCGGCG
AATATGCCCG ATGGGACGGT 901 TCGTTCAAAC TCGACAAAGC CAACCTGCAC
TCCGGCATCG CCAACATCGG 951 CAACGCCGAA ATCTCCGGCA GCTTCAAAAC
ACCGCGCCTT CAAACCAATT 1001 TCTCCCTCGG CTCGCCGTTG GTTTGGAGTC
GGGACAACGG GCTGGACGCC 1051 CCGCGCCTGC ACATATCGAC CCTTCAGGAT
ACCGTCGACC GCCTGCCGCA 1101 ACCCCGTTTC ATCAGCCGGC TCGACGGTTC
GCTGTCCATA CCGAATCTGC 1151 AAAATTGGAA TGCCGAATTA AACGGCACAT
TCGACCGCCA ACCCGTTGCC 1201 GCAAAATTCA AATATACGCG GGAAGGCGCA
CCGCACCTGG AAGCCGCCGC 1251 CGCGCTGCAA AAATTAAACC TCGCCCCCTA
TCTTGACGAA TTTCGGCAAC 1301 AAAACGGCAA AATATTCCCC GACATCCTCG
GCAGGCTGTC CGGCAACGTC 1351 GAGGCACACC TCAAAATCGG CAGCATCCAA
CTCCCCGGCT TGCAACTGGA 1401 CGATATGGAA ACCTACCTCC ACGCCGACAA
AGACCATATC GCGCTCAGCC 1451 GTTTCAAGTC AGGGCTTTAC GGCGGCCATA
CCGAAGGCGG CATCAGCATC 1501 GCCAACACCC GTCCCGCCAC TTACCGCCTG
CAACAGAATG CAAGCAACAT 1551 CCAAATCCAA CCGCTGCTGC AAGACCTGTT
CGGCTTCCAC AGCTTCAGCG 1601 GCAACGGCGA TGCGGTCATC GACCTGACCG
CAAGCGGCGA AAACCGCAAA 1651 CAGCTTATCC GCTCGCTGCA AGGCAGCCTG
TCGCTGAATA TTTCCAACGG 1701 CGCGTGGCAC GGCATCGATA TGGACAGCAT
TTTAAAAAAC GGCCTTTCCG 1751 GGAAAATCTC GGGCAGCACA CCCTTCTACC
GATTCACGCT CAACAGCGAA 1801 ATTTCAGACG GCATCAGCCG CCACATCGAT
ACCGAACTCT TCTCCGACAG 1851 CCTCTATGTT ACCAGCAACG GCTATACCAA
TCTGGATACG CAGGAATTGT 1901 CTGAAGATGT CCTTATCCGC AACGCCGTCC
ATCCGAAAAA CAAACCGATT 1951 CCCCTGAAAA TCACCGGTAC GGTGGACAAG
CCGTCCATTA CCGTCGATTA 2001 CGGCAGGCTG ACCGGCGGCA TCAATTCGCG
CAAAGAGAAA CAGAAAATCC 2051 TCGAAGACAC CCTGCTGGAA CAATGGCAGT
GGCTCAAACC TAAAGAACCG 3051 TAA
This corresponds to the amino acid sequence <SEQ ID 2652; ORF
771.ng>:
TABLE-US-03120 g771.pep 1 MDLLSVFHKY RLKYAVAVLT MLLLAAVGLH
ASVYRTFTPE NIRSRLQQSI 51 AHTHRKISFD ADIRRRLLPR PTVILKNLTI
TEPDGGRVAV SVKETKIGLS 101 WKNLWSDRIQ VEKWVVSGAD LALTRDRNGA
WNIQDLFDGA KHSASVNRII 151 VENSTVRLNF LQQQLILKEI SLNLQSPDSS
GQQFESSGIL VWRKLSVPWK 201 SRGLFLSDGI GTPEISPFHF EASTSLDGHG
ITISTTGSPS VRFNAGGADA 251 AGLGLRADTS FRNLHLTAQI PALALKNNSI
KTGTVNGTFT AGGEYARWDG 301 SFKLDKANLH SGIANIGNAE ISGSFKTPRL
QTNFSLGSPL VWSRDNGLDA 351 PRLHISTLQD TVDRLPQPRF ISRLDGSLSI
PNLQNWNAEL NGTFDRQPVA 401 AKFKYTREGA PHLEAAAALQ KLNLAPYLDE
FRQQNGKIFP DILGRLSGNV 451 EAHLKIGSIQ LPGLQLDDME TYLHADKDHI
ALSRFKSGLY GGHTEGGISI 501 ANTRPATYRL QQNASNIQIQ PLLQDLFGFH
SFSGNGDAVI DLTASGENRK 551 QLIRSLQGSL SLNISNGAWH GIDMDSILKN
GLSGKISGST PFYRFTLNSE 601 ISDGISRHID TELFSDSLYV TSNGYTNLDT
QELSEDVLIR NAVHPKNKPI 651 PLKITGTVDK PSITVDYGRL TGGINSRKEK
QKILEDTLLE QWQWLKPKEP 701 *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2653>:
TABLE-US-03121 m771.seq 1 ATGGATTTAT TATCGGTTTT CCACAAATAC
CGTCTGAAAT ATGCGGTGGC 51 CGTGCTGACG ATACTGCTTT TGGCGGCAGT
CGGGCTGCAC GCTTCCGTAT 101 ATCGCACCTT CACGCCTGAA AACATCCGCA
GCCGCCTACA ACAAAGCATT 151 GCACACACAC ACCGGAAAAT CTCGTTTGAT
GCGGACATTC AGCGCAGGCT 201 CCTGCCCCGG CCGACCGTCA TCCTGAAAAA
CCTGACCATT ACCGAACCCG 251 GCGGCGACCA GACTGCCGTT TCCGTCCAAG
AAACCAAAAT CGGATTGAGC 301 TGGAAAAACC TGTGGTCGGA TCAGATACAG
ATTGAAAAAT GGGTGGTTTC 351 GAGTGCGGAA CTTGCCCTGA CGCGCGACGG
GAAAGGTGTT TGGAACATCC 401 AAGACCTGAT CGACAGCCAA AAACGCCAAG
CCTCAGTCAA CCGCATTATC 451 GTCGAAAACA GCACCGTCCG CCTCAATTTC
CTGCAGGAAC AGCTTATCCT 501 GAAGGAAATC AACCTCAACC TGCAATCCCC
CGATTCGTCG GGGCAGCCGT 551 TTGAAAGTTC GGGCATACTG GTTTGGGGAA
AGCTGTCCGT CCCGTGGAAA 601 AGCAGGGGGC TGTTCCTTTC AAACGGCATC
GGCCCGCCCG AAATCTCACC 651 GTTCCATTTT GAAGCTTCCA CTTCGCTGGA
CGGACACGGC ATTACCATTT 701 CCACCACCGG CAGCCCTTCT GTCCGCTTCA
ACGCCGGCGG AGCGGATGCC 751 GCCGGCCTCG GCCTGCGTGC AGACACTTCC
TTCCGCAACC TCCACCTGAC 801 CGCCCAAATC CCCGCGCTGG CACTCAGGAA
CAACAGCATT AAAATTGAAA 851 CCGTCAACGG CGCATTTACC GCCGGCGGCG
AATATGCCCG ATGGGACGGT 901 TCGTTCAAAC TCGACAAAGC CAACCTGCAC
TCCGGCATCG CCAACATCGG 951 CAACGCCGAA ATCTCCGGCA GCTTCAAAAC
ACCGCGCCAC CAGACCAACT 1001 TCTCCCTCAA TTCGCCGCTC GTATGGACGG
AAAACAAAGG GCTGGACGCG 1051 CCGCGCCTGT ATGTATCGAC CCTTCAGGAT
ACCGTCAACC GCCTGCCGCA 1101 ACCCCGTTTC ATCAGCCGGC TCGACGGTTC
GCTGTCCGTA CCGAATCTGC 1151 AAAATTGGAA TGCCGAATTA AACGGCACAT
TCGACCGCCA AACCGTTGCC 1201 GCGAAATTCA GATACACACA TGAAGACGCA
CCGCATCTGG AAGCCGCCGT 1251 CGCACTGCAA AAATTGAACC TGACCCCCTA
TCTTGACGAC GTGCGGCAAC 1301 AAAACGGCAA AATATTTCCC GACACCCTCG
CCAAGCTGTC CGGCGACATC 1351 GAGGCGCACC TGAAAATCGG AAAAGTCCAA
CTTCCCGGCC TGCAACTGGA 1401 CGATATGGAA ACCTACCTCC ACGCCGACAA
AGGCCATATC GCGCTCAGCC 1451 GTTTCAAGTC AGGGCTTTAC GGCGGCCATA
CCGAAGGCGG CATCAGCATC 1501 GCCAACACCC GTCCCGCCAC TTACCGCCTG
CAACAGAATG CAAGCAACAT 1551 CCAAATCCAA CCGCTGCTGC AAGACCTGTT
CGGCTTCCAC AGCTTCAGCG 1601 GCAACGGCGA CGCGGTCATC GACCTGACCG
CGGGCGGCGA AACCCGAAAA 1651 GAGCTTATCC GCTCGCTTCA GGGCAGCCTG
TCGCTAAATA TTTCCAACGG 1701 TGCATGGCAC GGTATCGACA TGGACAATAT
CCTGAAAAAC GGCATTTCGG 1751 GCAAAACTGC CGACAATGCC GCACCCAGCA
CACCCTTCCA CCGATTCACG 1801 CTCAACAGCG AAATTTCAGA CGGCATCAGC
CGCCACATCG ATACCGAACT 1851 CTTCTCCGAC AGCCTCTATG TTACCAGCAA
CGGCTATACC AATCTGGATA 1901 CGCAGGAATT GTCTGAAGAT GTCCTTATCC
GCAACGCCGT CCATCCGAAA 1951 AACAAACCGA TTCCCCTGAA AATCACCGGC
ACGGTGGACA AACCGTCCAT 2001 TACCGTCGAT TACGGCAGGC TGACCGGCGG
CATCAATTCG CGCAAAGAGA 2051 AACAGAAAAT CCTCGAAGAC ACCCTGCTGG
AACAATGGCA GTGGCTCAAA 2101 CCTAAAGAAC CGTA
This corresponds to the amino acid sequence <SEQ ID 2654; ORF
771>:
TABLE-US-03122 m771.pep 1 MDLLSVFHKY RLKYAVAVLT ILLLAAVGLH
ASVYRTFTPE NIRSRLQQSI 51 AHTHRKISFD ADIQRRLLPR PTVILKNLTI
TEPGGDQTAV SVQETKIGLS 101 WKNLWSDQIQ IEKWVVSSAE LALTRDGKGV
WNIQDLIDSQ KRQASVNRII 151 VENSTVRLNF LQEQLILKEI NLNLQSPDSS
GQPFESSGIL VWGKLSVPWK 201 SRGLFLSNGI GPPEISPFHF EASTSLDGHG
ITISTTGSPS VRFNAGGADA 251 AGLGLRADTS FRNLHLTAQI PALALRNNSI
KIETVNGAFT AGGEYARWDG 301 SFKLDKANLH SGIANIGNAE ISGSFKTPRH
QTNFSLNSPL VWTENKGLDA 351 PRLYVSTLQD TVNRLPQPRF ISRLDGSLSV
PNLQNWNAEL NGTFDRQTVA 401 AKFRYTHEDA PHLEAAVALQ KLNLTPYLDD
VRQQNGKIFP DTLAKLSGDI 451 EAHLKIGKVQ LPGLQLDDME TYLHADKGHI
ALSRFKSGLY GGHTEGGISI 501 ANTRPATYRL QQNASNIQIQ PLLQDLFGFH
SFSGNGDAVI DLTAGGETRK 551 ELIRSLQGSL SLNISNGAWH GIDMDNILKN
GISGKTADNA APSTPFHRFT 601 LNSEISDGIS RHIDTELFSD SLYVTSNGYT
NLDTQELSED VLIRNAVHPK 651 NKPIPLKITG TVDKPSITVD YGRLTGGINS
RKEKQKILED TLLEQWQWLK 701 PKEP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 771
shows 90.3% identity over a 704 aa overlap with a predicted ORF
(ORF 771) from N. gonorrhoeae
TABLE-US-03123 m771/g771 90.3% identity in 704 aa overlap 10 20 30
40 50 60 g771.pep
MDLLSVFHKYRLKYAVAVLTMLLLAAVGLHASVYRTFTPENIRSRLQQSIAHTHRKISFD
||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||| m771
MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSIAHTHRKISFD 10 20
30 40 50 60 70 80 90 100 110 120 g771.pep
ADIRRRLLPRPTVILKNLTITEPDGGRVAVSVKETKIGLSWKNLWSDRIQVEKWVVSGAD
|||:||||||||||||||||||| | ::||||:||||||||||||||:||:||||||:|: m771
ADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAE 70 80
90 100 110 120 130 140 150 160 170 180 g771.pep
LALTRDRNGAWNIQDLFDGAKHSASVNRIIVENSTVRLNFLQQQLILKEISLNLQSPDSS ||||||
:|:||||||:|: |::|||||||||||||||||||:|||||||:||||||||| m771
LALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNFLQEQLILKEINLNLQSPDSS 130
140 150 160 170 180 190 200 210 220 230 240 g771.pep
GQQFESSGILVWRKLSVPWKSRGLFLSDGIGTPEISPFHFEASTSLDGHGITISTTGSPS ||
||||||||| ||||||||||||||:||| |||||||||||||||||||||||||||| m771
GQPFESSGILVWGKLSVPWKSRGLFLSNGIGPPEISPFHFEASTSLDGHGITISTTGSPS 190
200 210 220 230 240 250 260 270 280 290 300 g771.pep
VRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALKNNSIKTGTVNGTFTAGGEYARWDG
|||||||||||||||||||||||||||||||||||:||||| ||||:|||||||||||| m771
VRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDG 250
260 270 280 290 300 310 320 330 340 350 360 g771.pep
SFKLDKANLHSGIANIGNAEISGSFKTPRLQTNFSLGSPLVWSRDNGLDAPRLHISTLQD
||||||||||||||||||||||||||||| ||||||:|||||::::|||||||::||||| m771
SFKLDKANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDAPRLYVSTLQD 310
320 330 340 350 360 370 380 390 400 410 420 g771.pep
TVDRLPQPRFISRLDGSLSIPNLQNWNAELNGTFDRQPVAAKFKYTREGAPHLEAAAALQ
||:||||||||||||||||:||||||||||||||||| |||||:||:| |||||||:||| m771
TVNRLPQPRFISRLDGSLSVPNLQNWNAELNGTFDRQTVAAKFRYTHEDAPHLEAAVALQ 370
380 390 400 410 420 430 440 450 460 470 480 g771.pep
KLNLAPYLDEFRQQNGKIFPDILGRLSGNVEAHLKIGSIQLPGLQLDDMETYLHADKDHI
||||:||||: |||||||||| |::|||::|||||||::|||||||||||||||||| || m771
KLNLTPYLDDVRQQNGKIFPDTLAKLSGDIEAHLKIGKVQLPGLQLDDMETYLHADKGHI 430
440 450 460 470 480 490 500 510 520 530 540 g771.pep
ALSRFKSGLYGGHTEGGISIANTRPATYRLQQNASNIQIQPLLQDLFGFHSFSGNGDAVI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
ALSRFKSGLYGGHTEGGISIANTRPATYRLQQNASNIQIQPLLQDLFGFHSFSGNGDAVI 490
500 510 520 530 540 550 560 570 580 590 g771.pep
DLTASGENRKQLIRSLQGSLSLNISNGAWHGIDMDSILKNGLSGKISG----STPFYRFT
||||:||:||:||||||||||||||||||||||||:|||||:||| : ||||:||| m771
DLTAGGETRKELIRSLQGSLSLNISNGAWHGIDMDNILKNGISGKTADNAAPSTPFHRFT 550
560 570 580 590 600 600 610 620 630 640 650 g771.pep
LNSEISDGISRHIDTELFSDSLYVTSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
LNSEISDGISRHIDTELFSDSLYVTSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITG 610
620 630 640 650 660 660 670 680 690 700 g771.pep
TVDKPSITVDYGRLTGGINSRKEKQKILEDTLLEQWQWLKPKEPX
||||||||||||||||||||||||||||||||||||||||||||| m771
TVDKPSITVDYGRLTGGINSRKEKQKILEDTLLEQWQWLKPKEPX 670 680 690 700
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2655>:
TABLE-US-03124 a771.seq 1 ATGGATTTAT TATCGGTCTT CCACAAATAC
CGTCTGAAAT ATGCGGTAGC 51 CGTGCTGACG ATACTGCTTT TGGCGGCAAT
CGGGCTGCAC GCTTCCGTAT 101 ATCGCATCTT CACACCTGAA AACATCCGAA
GCCGCCTCCA ACAAAGCATT 151 GCCCATACGC ACCGGAAAAT CTCGTTTGAT
GCGGATATAC AGCGCAGGCT 201 TCTGCCCCGG CCGACCGTCA TCCTGAAAAA
CCTGACCATT ACCGAACCCG 251 GCGGCGACCG GACTGCCGTT TCCGTCCAAG
AAACCAAAAT CGGATTGAGC 301 TGGAAAAACC TGTGGTCGGA TCAGATACAG
ATTGAAAAAT GGGTGGTTTC 351 GAGTGCGGAA CTTGCCCTGA CGCGCGACGG
GAAAGGTGTT TGGAACATCC 401 AAGACCTGAT CGACAGCCAA AAACGCCAAG
CCTCAGTCAA CCGCATTATC 451 GTCGAAAACA GCACCGTCCG CCTCAATTTC
CTGCAGGAAC AGCTTATCCT 501 GAAGGAAATC AACCTCAACC TGCAATCCCC
CGATTCGTCG GGGCAGCCGT 551 TTGAAAGTTC GGGCATACTG GTTTGGGGAA
AGCTGTCCGT CCCGTGGAAA 601 AGCAGGGGGC TGTTCCTTTC AGACGGCATC
GGCACGCCCA AAATCTCACC 651 GTTCCATTTT GAAGCTTCCA CTTCGCTGGA
CGGACACGGC ATTACCATTT 701 CCACCACCGG CAGCCCTTCT GTCCGCTTCA
ACGCCGGCGG AGCGGATGCC 751 GCCGGCCTCG GCCTGCGTGC AGACACTTCC
TTCCGCAACC TCCACCTGAC 801 CGCCCAAATC CCTACGCTGG CACTCAGGAA
CAACAGCATT AAAATTGAAA 851 CCGTCAACGG CGCATTTACC GCCGGCGGCG
AATATGCCCA ATGGGACGGT 901 TCGTTCAAAC TCGACAAAGC CAACCTGCAC
TCCGGCATCG CCAACATCGG 951 CAACGCCGAA ATCTCCGGCA GCTTCAAAAC
ACCGCGCCAC CAGACCAACT 1001 TCTCCCTCAA TTCGCCGCTC GTATGGACGG
AAAACAAAGG GCTGGACGCG 1051 CCGCGCCTGT ATGTATCGAC CCTTCAGGAT
ACCGTCAACC GCCTGCCGCA 1101 ACCCCGTTTC ATCAGCCGGC TCGACGGTTC
GCTGTCCGTA CCGAATCTGC 1151 AAAATTGGAA TGCCGAATTA AACGGCACAT
TCGACCGCCA AACCGTTGCC 1201 GCGAAATTCA GATACACACA TGAAGACGCA
CCGCATCTGG AAGCCGCCGT 1251 CGCACTGCAA AAATTGAACC TGACCCCCTA
TCTTGACGAC GTGCGGCAAC 1301 AAAACGGCAA AATATTTCCC GACACCCTCG
CCAAGCTGTC CGGCGACATC 1351 GAGGCGCACC TGAAAATCGG AAAAGTCCAA
CTTCCCGGCC TGCAACTGGA 1401 CGATATGGAA ACCTACCTCC ACGCCGACAA
AGGCCATATC GCGCTCAGCC 1451 GTTTCAAGTC AGGGCTTTAC GGCGGCCATA
CCGAAGGCGG CATCAGCATC 1501 GCCAACACCC GTCCCGCCAC TTACCGCCTG
CAACAGAATG CAAGCAACAT 1551 CCAAATCCAA CCGCTGCTGC AAGACCTGTT
CGGCTTCCAC AGCTTCAGCG 1601 GCAACGGCGA CGCGGTCATC GACCTGACCG
CGGGCGGCGA AACCCGAAAA 1651 GAGCTTATCC GCTCGCTTCA GGGCAGCCTG
TCGCTAAATA TTTCCAACGG 1701 TGCATGGCAC GGTATCGACA TGGACAATAT
CCTGAAAAAC GGCATTTCGG 1751 GCAAAACTGC CGACAATGCC GCACCCAGCA
CACCCTTCCA CCGATTCACG 1801 CTCAACAGCG AAATTTCAGA CGGCATCAGC
CGCCACATCG ATACCGAACT 1851 CTTCTCCGAC AGCCTCTATG TTACCAGCAA
CGGCTATACC AATCTGGATA 1901 CGCAGGAATT GTCTGAAGAT GTCCTTATCC
GCAACGCCGT CCATCCGAAA 1951 AACAAACCGA TTCCCCTGAA AATCACCGGT
ACGGTGGACA AACCGTCCAT 2001 TACCGTCGAT TACGGCAGGC TGACCGGCGG
CATCAATTCG CGCAAAGAGA 2051 AACAGAAAAT CCTCGAAGAC ACCCTGCTGG
AACAATGGCA GTGGCTCAAA 2101 CCTAAAGAAC CGTAA
This corresponds to the amino acid sequence <SEQ ID 2656; ORF
771.a>:
TABLE-US-03125 a771.pep 1 MDLLSVFHKY RLKYAVAVLT ILLLAAIGLH
ASVYRIFTPE NIRSRLQQSI 51 AHTHRKISFD ADIQRRLLPR PTVILKNLTI
TEPGGDRTAV SVQETKIGLS 101 WKNLWSDQIQ IEKWVVSSAE LALTRDGKGV
WNIQDLIDSQ KRQASVNRII 151 VENSTVRLNF LQEQLILKEI NLNLQSPDSS
GQPFESSGIL VWGKLSVPWK 201 SRGLFLSDGI GTPKISPFHF EASTSLDGHG
ITISTTGSPS VRFNAGGADA 251 AGLGLRADTS FRNLHLTAQI PTLALRNNSI
KIETVNGAFT AGGEYAQWDG 301 SFKLDKANLH SGIANIGNAE ISGSFKTPRH
QTNFSLNSPL VWTENKGLDA 351 PRLYVSTLQD TVNRLPQPRF ISRLDGSLSV
PNLQNWNAEL NGTFDRQTVA 401 AKFRYTHEDA PHLEAAVALQ KLNLTPYLDD
VRQQNGKIFP DTLAKLSGDI 451 EAHLKIGKVQ LPGLQLDDME TYLHADKGHI
ALSRFKSGLY GGHTEGGISI 501 ANTRPATYRL QQNASNIQIQ PLLQDLFGFH
SFSGNGDAVI DLTAGGETRK 551 ELIRSLQGSL SLNISNGAWH GIDMDNILKN
GISGKTADNA APSTPFHRFT 601 LNSEISDGIS RHIDTELFSD SLYVTSNGYT
NLDTQELSED VLIRNAVHPK 651 NKPIPLKITG TVDKPSITVD YGRLTGGINS
RKEKQKILED TLLEQWQWLK 701 PKEP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 771
shows 98.9% identity over a 704 aa overlap with a predicted ORF
(ORF 771) from N. meningitidis
TABLE-US-03126 m771/a771 98.9% identity in 704 aa overlap 10 20 30
40 50 60 a771.pep
MDLLSVFHKYRLKYAVAVLTILLLAAIGLHASVYRIFTPENIRSRLQQSIAHTHRKISFD
||||||||||||||||||||||||||:|||||||| |||||||||||||||||||||||| m771
MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRSRLQQSIAHTHRKISFD 10 20
30 40 50 60 70 80 90 100 110 120 a771.pep
ADIQRRLLPRPTVILKNLTITEPGGDRTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAE
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| m771
ADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWKNLWSDQIQIEKWVVSSAE 70 80
90 100 110 120 130 140 150 160 170 180 a771.pep
LALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNFLQEQLILKEINLNLQSPDSS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
LALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNFLQEQLILKEINLNLQSPDSS 130
140 150 160 170 180 190 200 210 220 230 240 a771.pep
GQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPFHFEASTSLDGHGITISTTGSPS
|||||||||||||||||||||||||||:||| |:|||||||||||||||||||||||||| m771
GQPFESSGILVWGKLSVPWKSRGLFLSNGIGPPEISPFHFEASTSLDGHGITISTTGSPS 190
200 210 220 230 240 250 260 270 280 290 300 a771.pep
VRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALRNNSIKIETVNGAFTAGGEYAQWDG
|||||||||||||||||||||||||||||||:||||||||||||||||||||||||:||| m771
VRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALRNNSIKIETVNGAFTAGGEYARWDG 250
260 270 280 290 300 310 320 330 340 350 360 a771.pep
SFKLDKANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDAPRLYVSTLQD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
SFKLDKANLHSGIANIGNAEISGSFKTPRHQTNFSLNSPLVWTENKGLDAPRLYVSTLQD 310
320 330 340 350 360 370 380 390 400 410 420 a771.pep
TVNRLPQPRFISRLDGSLSVPNLQNWNAELNGTFDRQTVAAKFRYTHEDAPHLEAAVALQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
TVNRLPQPRFISRLDGSLSVPNLQNWNAELNGTFDRQTVAAKFRYTHEDAPHLEAAVALQ 370
380 390 400 410 420 430 440 450 460 470 480 a771.pep
KLNLTPYLDDVRQQNGKIFPDTLAKLSGDIEAHLKIGKVQLPGLQLDDMETYLHADKGHI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
KLNLTPYLDDVRQQNGKIFPDTLAKLSGDIEAHLKIGKVQLPGLQLDDMETYLHADKGHI 430
440 450 460 470 480 490 500 510 520 530 540 a771.pep
ALSRFKSGLYGGHTEGGISIANTRPATYRLQQNASNIQIQPLLQDLFGFHSFSGNGDAVI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
ALSRFKSGLYGGHTEGGISIANTRPATYRLQQNASNIQIQPLLQDLFGFHSFSGNGDAVI 490
500 510 520 530 540 550 560 570 580 590 600 a771.pep
DLTAGGETRKELIRSLQGSLSLNISNGAWHGIDMDNILKNGISGKTADNAAPSTPFHRFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
DLTAGGETRKELIRSLQGSLSLNISNGAWHGIDMDNILKNGISGKTADNAAPSTPFHRFT 550
560 570 580 590 600 610 620 630 640 650 660 a771.pep
LNSEISDGISRHIDTELFSDSLYVTSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m771
LNSEISDGISRHIDTELFSDSLYVTSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITG 610
620 630 640 650 660 670 680 690 700 a771.pep
TVDKPSITVDYGRLTGGINSRKEKQKILEDTLLEQWQWLKPKEPX
||||||||||||||||||||||||||||||||||||||||||||| m771
TVDKPSITVDYGRLTGGINSRKEKQKILEDTLLEQWQWLKPKEPX 670 680 690 700
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2657>:
TABLE-US-03127 g772.seq 1 GTGTTCGGCA CGGTCTTGCG GACTGATGCC
GACTGCCTGC AAATCATCGT 51 CGTCGGCAAG TTCTTTCAGG TTGTTGCGTA
TGGTTTTGCG GCGTTGGCGG 101 AAGGCGAGTT TCACCAGTTT GGCGAAATGA
TCGAAATCGT CCGCCTTGCC 151 GATACGGTGT TTCACCGGAA TCATGCGCAC
CACTGCGGAA TCGATTTTCG 201 GCGCGGGATC GAACGATTCG GGCGGCACGT
CAATCAGCAG CTCCATATCG 251 AAAAAATATT GCAGCATCAC ACCCAAGCGA
CCGTAGTCGT TGCTTTTCGG 301 CGCGGCAACC ATGCGCTCGA CCACTTCTTT
TTGCAACATA AAGTGCATAT 351 CGGCGACATC GTCCGCCACC TCCGCCAGTT
TGAACAAAAG CGGCGTGGAG 401 ATGTTATACG GCAGGTTGCC GACGATTTTC
TTTTTGCCTG AGATGCCGTT 451 GAAATCAAAC TGCAACACGT CGCCTTCGTG
AATCACCAGT TTATCCGCAA 501 ACGGCAGCGT TTTCAGACGG CATACGATGT
CGCGGTCGAT TTCGACAACG 551 TGCAGGCGGT TCAGCTTTTT CGCCAAAGGT
TCGGTAATTG CCGCCAAACC 601 CGGGCCGATT TCAATCACGA CATCATCCGC
CTGCGGGCGC ACGGCGTTGA 651 CAATATCGCC GATAATCCGC GTGTCCTGCA
AAAAATTCTG CCCGAAACGC 701 TTGCGGGCTT TGTGTTCTTT CATCGTGTTT
CCTCTTCGGT TGAAACCCCG 751 CCCTTTAGGG CGGCAGGATC AGACTCTGTT
TGGGCGGGGC GTAACCCCTT 801 CCAAATCAGG ACGACACATA GGGCGGTGCT
TTATGTGTCG TCCTGTGTGT 851 TGGAACATAA ATGTGTTTAC AGTATCCGTT
TGATGTCGGC ATTGTAA
This corresponds to the amino acid sequence <SEQ ID 2658; ORF
772.ng>:
TABLE-US-03128 g772.pep 1 VFGTVLRTDA DCLQIIVVGK FFQVVAYGFA
ALAEGEFHQF GEMIEIVRLA 51 DTVFHRNHAH HCGIDFRRGI ERFGRHVNQQ
LHIEKILQHH TQATVVVAFR 101 RGNHALDHFF LQHKVHIGDI VRHLRQFEQK
RRGDVIRQVA DDFLFA*DAV 151 EIKLQHVAFV NHQFIRKRQR FQTAYDVAVD
FDNVQAVQLF RQRFGNCRQT 201 RADFNHDIIR LRAHGVDNIA DNPRVLQKIL
PETLAGFVFF HRVSSSVETP 251 PFRAAGSDSV WAGRNPFQIR TTHRAVLYVS
SCVLEHKCVY SIRLMSAL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2659>:
TABLE-US-03129 m772.seq 1 ATGTTCGGCG CGGTCTTGCG GATTGATGCC
GACTGCCTGC AAATCATCGT 51 CGCCTGCAAG CTCTTTCAGA TTGTTGCGTA
TGGTTTTGCG GCGTTGGTGG 101 AAGGCGAGTT TCACGAGTTT GGCAAAATGC
TCGAAATCGT CCGCCTTGCC 151 GATGCGGTGT TTCACCGGAA TCATACGGAC
GACGGCGGAA TCCACTTTCG 201 GCGCAGGGTC GAACGATTCG GGCGGTACGT
CAATCAGCAT TTCCATATCG 251 AAAAAATATT GCAGCATCAC GCCCAAGCGG
CCGTAGTCGT TGCTTTTCGG 301 CGCGGCAACC ATACGCTCGA CCACTTCTTT
TTGCAGCATA AAGTGCATAT 351 CGACGACATC GTCCGCCACC TCCGCCAGCT
TGAACAAAAG CGGTGTGGAA 401 ATGTTGTACG GGAGGTTGCC GACGATTTTC
TTTTTGCCTG CGATGCCGTT 451 GAAATCAAAC TGCAATACAT CGCCTTCGTG
AATCACCAGT TTATCCGCAA 501 ACGGCAGCGT TTTCAGACGG CATACGATGT
CGCGGTCGAT TTCGACAACG 551 TGCAGGCGGT TCAGCTTTTT CGCCAAAGGT
TCGGTAATCG CCGCCAAACC 601 CGGGCCGATT TCAATCACGA CATCATCCGC
CTGCGGGCGC ACGGCGTTGA 651 CAATATCGCT GATAATCCGC GTGTCCTGCA
AAAAATTCTG CCCGAAACGC 701 TTGCGGGCTT TGTGTTCTTT CATCGTGTTT
CCTTTTCGGT TGAAACCCCG 751 CCCTTTAGGG CGGTAGAATC AGACTCTATT
TGGGAGGGGC GTAACTCTTT 801 CCAAATCAGG ATGGCACATA GGGCGGTGCT
TTATGTGTCG TCCTGTGTGT 851 TGAAACATAA ATGTGTTTAC AGTATCCGTT
TGATGTCGGC ATTGTAA
This corresponds to the amino acid sequence <SEQ ID 2660; ORF
772>:
TABLE-US-03130 m772.pep 1 MFGAVLRIDA DCLQIIVACK LFQIVAYGFA
ALVEGEFHEF GKMLEIVRLA 51 DAVFHRNHTD DGGIHFRRRV ERFGRYVNQH
FHIEKILQHH AQAAVVVAFR 101 RGNHTLDHFF LQHKVHIDDI VRHLRQLEQK
RCGNVVREVA DDFLFACDAV 151 EIKLQYIAFV NHQFIRKRQR FQTAYDVAVD
FDNVQAVQLF RQRFGNRRQT 201 RADFNHDIIR LRAHGVDNIA DNPRVLQKIL
PETLAGFVFF HRVSFSVETP 251 PFRAVESDSI WEGRNSFQIR MAHRAVLYVS
SCVLKHKCVY SIRLMSAL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 772
shows 85.2% identity over a 298 aa overlap with a predicted ORF
(ORF 772) from N. gonorrhoeae
TABLE-US-03131 m772/g772 85.2% identity in 298 aa overlap 10 20 30
40 50 60 g772.pep
VFGTVLRLDADCLQIIVVGKFFQVVAYGFAALAEGEFHQFGEMIEIVRLADTVFHRNHAH
:||:||| |||||||||: |:||:||||||||:|||||:||:|:|||||||:||||||: m772
MFGAVLRIDADCLQIIVACKLFQIVAYGFAALVEGEFHEFGKMLEIVRLADAVFHRNHTD 10 20
30 40 50 60 70 80 90 100 110 120 g772.pep
HCGIDFRRGIERFGRHVNQQLHIEKILQHHTQATVVVAFRRGNHALDHFFLQHKVHIGDI || |||
:|||||:|||::|||||||||:||:||||||||||:|||||||||||| || m772
DGGIHFRRRVERFGRYVNQHFHIEKILQHHAQAAVVVAFRRGNHTLDHFFLQHKVHIDDI 70 80
90 100 110 120 130 140 150 160 170 180 g772.pep
VRHLRQFEQKRRGDVIRQVADDFLFAXDAVEIKLQHVAFVNHQFIRKRQRFQTAYDVAVD
||||||:|||| |:|:|:|||||||| ||||||||:||||||||||||||||||||||| m772
VRHLRQLEQKRCGNVVREVADDFLFACDAVEIKLQYIAFVNHQFIRKRQRFQTAYDVAVD 130
140 150 160 170 180 190 200 210 220 230 240 g772.pep
FDNVQAVQLFRQRFGNCRQTRADFNHDIIRLRAHGVDNIADNPRVLQKILPETLAGFVFF
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| m772
FDNVQAVQLFRQRFGNRRQTRADFNHDIIRLRAHGVDNIADNPRVLQKILPETLAGFVFF 190
200 210 220 230 240 250 260 270 280 290 299 g772.pep
HRVSSSVETPPFRAAGSDSVWAGRNPFQIRTTHRAVLYVSSCVLEHKCVYSIRLMSALX ||||
|||||||||: |||:| ||| |||| :||||||||||||:|||||||||||||| m772
HRVSFSVELPPFRAVESDSIWEGRNSFQIRMAHRAVLYVSSCVLKHKCVYSIRLMSALX 250 260
270 280 290
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2661>:
TABLE-US-03132 a772.seq 1 ATGTTCGGCG CGGTCTTGCG GATTGATGCC
GACTGCCTGC AAATCATCGT 51 CGCCTGCAAG CTCTTTCAGA TTGTTGCGTA
TGGTTTTGCG GCGTTGGTGG 101 AAGGCGAGTT TCACGAGTTT GGCGAAATGC
TCGAAATCGT CCGCCTTGCC 151 GATACGGTGT TTCACCGGAA TCATGCGGAC
GACGGCCGAA TCCACTTTCG 201 GCGCGGGGTC GAACGATTCG GGCGGCACGT
CAATCAGCAT TTCCATATCG 251 AAGAAATATT GCAGCATCAC GCCCAAGCGG
CCGTAGTCGT TGCTTTTCGG 301 CGCGGCAACC ATACGATCGA CCACTTCTTT
TTGCAGCATA AAGTGCATAT 351 CGACGACATC GTCCGCCACC TCCGCCAGCT
TGAACAAAAG CGGCGTGGAA 401 ATGTTGTAGG GCAGGTTGCC GACGATTTTC
TTTTTGCCTG CGATGCCGTT 451 GAAATCAAAC TGCAATACAT CGCCTTCGTG
AATCACCAGT TTATCCGCAA 501 ACGGCAGCGT TTTCAGACGG CATACGATGT
CGCGGTCGAT TTCGACAACG 551 TGCAGGCGGT TCAGCTTTTT CGCCAAAGGT
TCGGTAATCG CCGCCAAACC 601 CGGACCGATT TCAATCACGA CATCATCCGC
CTGCGGGCGC ACGGCGTTGA 651 CAATATCGCT GATAATCCGC GTGTCCTGCA
AAAAATTCTG CCCGAAACGC 701 TTGCGGGCTT TGTGTTCTTT CATCGTGTTT
CCTTTTCGGT TGAAACCCCG 751 CCCTTTAGGG CGGTAGAATC AGACTCTATT
TGGGAGGGGC GTAACTCCTT 801 CCAAATCAGG ACGGCACATA GGGCGGTGCT
TTATGTGTCG TCCTGTGTGT 851 TGAAACATAA ATGTGTTTAC AGTATCCGTT
TGATGTCGGC ATTGTAA
This corresponds to the amino acid sequence <SEQ ID 2662; ORF
772.a>:
TABLE-US-03133 a772.pep 1 MFGAVLRIDA DCLQIIVACK LFQIVAYGFA
ALVEGEFHEF GEMLEIVRLA 51 DTVFHRNHAD DGRIHFRRGV ERFGRHVNQH
FHIEEILQHH AQAAVVVAFR 101 RGNHTIDHFF LQHKVHIDDI VRHLRQLEQK
RRGNVVGQVA DDFLFACDAV 151 EIKLQYIAFV NHQFIRKRQR FQTAYDVAVD
FDNVQAVQLF RQRFGNRRQT 201 RTDFNHDIIR LRAHGVDNIA DNPRVLQKIL
PETLAGFVFF HRVSFSVETP 251 PFRAVESDSI WEGRNSFQIR TAHRAVLYVS
SCVLKHKCVY SIRLMSAL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 772
shows 95.6% identity over a 298 aa overlap with a predicted ORF
(ORF 772) from N. meningitidis
TABLE-US-03134 m772/a772 95.6% identity in 298 aa overlap 10 20 30
40 50 60 a772.pep
MFGAVLRIDADCLQIIVACKLFQIVAYGFAALVEGEFHEFGEMLEIVRLADTVFHRNHAD
|||||||||||||||||||||||||||||||||||||||||:|||||||||:||||||:| m772
MFGAVLRIDADCLQIIVACKLFQIVAYGFAALVEGEFHEFGKMLEIVRLADAVFHRNHTD 10 20
30 40 50 60 70 80 90 100 110 120 a772.pep
DGRIHFRRGVERFGRHVNQHFHIEEILQHHAQAAVVVAFRRGNHTIDHFFLQHKVHIDDI ||
||||| ||||||:||||||||:||||||||||||||||||||:|||||||||||||| m772
DGGIHFRRRVERFGRYVNQHFHIEKILQHHAQAAVVVAFRRGNHTLDHFFLQHKVHIDDI 70 80
90 100 110 120 130 140 150 160 170 180 a772.pep
VRHLRQLEQKRRGNVVGQVADDFLFACDAVEIKLQYIAFVNHQFIRKRQRFQTAYDVAVD
||||||||||| |||| :|||||||||||||||||||||||||||||||||||||||||| m772
VRHLRQLEQKRCGNVVREVADDFLFACDAVEIKLQYIAFVNHQFIRKRQRFQTAYDVAVD 130
140 150 160 170 180 190 200 210 220 230 240 a772.pep
FDNVQAVQLFRQRFGNRRQTRLDFNHDIIRLRAHGVDNIADNPRVLQKILPETLAGFVFF
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| m772
FDNVQAVQLFRQRFGNRRQTRADFNHDIIRLRAHGVDNIADNPRVLQKILPETLAGFVFF 190
200 210 220 230 240 250 260 270 280 290 299 a772.pep
HRVSFSVELPPFRAVESDSIWEGRNSFQIRTAHRAVLYVSSCVLKHKCVYSIRLMSALX
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| m772
HRVSFSVELPPFRAVESDSIWEGRNSFQIRMAHRAVLYVSSCVLKHKCVYSIRLMSALX 250 260
270 280 290
[0424] g773.seq not found yet
[0425] g773.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2663>:
TABLE-US-03135 m773.seq 1 ATGGGATTGG GTGCAACGAC TTTTGTCGGT
TCGGGTGCTA TAGGCGGAGG 51 TCTGTGCAGT ACCGGGATTG GCTGTGCGGC
CGGTGGACTT ATTGCAACGG 101 CAGGTATGAC CGGTGGTTAT ACACAGGCCT
CAGAAGGAAG CCGGCAATTG 151 TTTGGCACTT ACCAGTCCGA TTTTGGTAAA
AAAGTTGTCC TATCTTTGGG 201 TACACCAATA GAATACGAAT CGCCGTTAGT
ATCTGATGCG AAAAATCTAG 251 CCGTATGGGG ATTGGAAACG CTGATTACGC
GCAAATTGGG AAACTTGGCA 301 ACGGGTGTGA AAACTTCCTT GACTCCGAAA
ACTGCTGACG TACAGCGAAA 351 TATCCTGTCC CAATCCGAAG TCGGTATCAA
GTGGGGCAAG GGGATTGAAG 401 GACAGGGAAT GCCTTGGGAG GATTATGTCG
GTAAGGGCTT GTCTGCCAAT 451 GCAAGGTTAC CTAAAAATTT TAAAACATTT
GATTATTTTG ATCGTGGTAC 501 AGGCACGGCA ATCAGTGCCA AAACTCTGGA
TACGCAAACT ACGGCACGCC 551 TGTCCAAACC CGAACAGCTT TACAGTACCA
TGAAAGGGTA CATCGATAAG 601 ACGGCAAATT TCAAAAGTTA TGAATTATCA
GAAGTACCGT TAAGGGCAGA 651 CATGATCAAA CAGCGCGAAA TCCATCTGGC
CATACCCGCA CAAACTAATA 701 AGGAGCAAAG ATTGCAGTTG CAACGTGTGG
TAGAGTATGG CAAAAGTCAA 751 AACATTACAG TCAAAATTAC GGAGATCGAA TAA
This corresponds to the amino acid sequence <SEQ ID 2664; ORF
773>:
TABLE-US-03136 m773.pep 1 MGLGATTFVG SGAIGGGLCS TGIGCAAGGL
IATAGMTGGY TQASEGSRQL 51 FGTYQSDFGK KVVLSLGTPI EYESPLVSDA
KNLAVWGLET LITRKLGNLA 101 TGVKTSLTPK TADVQRNILS QSEVGIKWGK
GIEGQGMPWE DYVGKGLSAN 151 ARLPKNFKTF DYFDRGTGTA ISAKTLDTQT
TARLSKPEQL YSTMKGYIDK 201 TANFKSYELS EVPLRADMIK QREIHLAIPA
QTNKEQRLQL QRVVEYGKSQ 251 NITVKITEIE *
[0426] a773.seq not found yet
[0427] a773.pep not found yet
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2665>:
TABLE-US-03137 g774.seq 1 ATGAAGACCA AATTACCGCT TTTTATCATT
TGGCTGTCTG TGTCTGCCTC 51 CTGTGCTTCC GTTTTACCCG TTCCGGAGGG
CAGCCGAACC GAAATGCCGA 101 CACAGGAAAA TGCTTCAGAC GGCATTCCCT
ATCCCGTTCC CACTCTGCAA 151 GACCGTTTGG ACTATCTGGA AGGCAAAATC
GTCCGGCTGT CGAACGAAGT 201 GGAAATGTTA AACGGGAAAG TCAAAGCATT
GGAGCATACG AAAATACACC 251 CTTCCGGCAG GACATACGTC CAAAAACTCG
ACGACCGCAA ATTGAAAGAG 301 CATTACCTCA ATACCGAAGG CGGCAGCGCA
TCCGCACATA CCGTCGAAAC 351 CGCACAAAAC CTCTACAATC AGGCACTCAA
ACACTATCAA AACGGCAGGT 401 TTTCTGCCGC AGCCGCCTTG TTGAAGGGGG
CGGACGGCGG AGACGGCGGC 451 AGCATCGCGC AACGCAGTAT GTACCTGTTG
CTGCAAAGCA GGGCGCGTAT 501 GGGGAACTGT GAATCTGTCA TCGAAATCGG
AGGGCGTTAC GCCAACCGTT 551 TCAAAGACAG CCCAACCGCG CCCGAAGTCA
TATTCAAAAT CGGCGAATGC 601 CAATACAGGC TTCAGCAAAA AGACATTGCA
AGGGCGACTT GGCGCAGCCT 651 GATACAGACC TATCCCGGCA GCCCGGCGGC
AAAACGCGCC GCCGCAGCCG 701 TACGCAAACG ATAG
This corresponds to the amino acid sequence <SEQ ID 2666; ORF
774.ng>:
TABLE-US-03138 g774.pep 1 MKTKLPLFII WLSVSASCAS VLPVPEGSRT
EMPTQENASD GIPYPVPTLQ 51 DRLDYLEGKI VRLSNEVEML NGKVKALEHT
KIHPSGRTYV QKLDDRKLKE 101 HYLNTEGGSA SAHTVETAQN LYNQALKHYQ
NGRFSAAAAL LKGADGGDGG 151 SIAQRSMYLL LQSRARMGNC ESVIEIGGRY
ANRFKDSPTA PEVIFKIGEC 201 QYRLQQKDIA RATWRSLIQT YPGSPAAKRA
AAAVRKR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2667>:
TABLE-US-03139 m774.seq 1 ATGAAGATCA AATTACCGCT TTTTATCATT
TGGCTGTCTG TGTCCGCCTC 51 CTGTGCTTCC GTTTCACCCG TTCCGGCAGG
CAGCCAAACC GAAATGTCGA 101 CACGGGAAAA TGCTTCAGAC GGCATTCCCT
ATCCCGTTCC GACCTTGCAA 151 GACCGTTTGG ACTATCTGGA AGGCAAAATC
GTCCGGCTGT CGAACGAAGT 201 GGAAACCTTA AACGGCAAAG TCAAAGCACT
GGAACACGCA AAAACACATT 251 CTTCCGGCAG GGCATACGTC CAAAAACTCG
ACGACCGCAA GTTGAAAGAG 301 CATTACCTCA ATACCGAAGG CGGCAGCGCA
TCCGCACATA CTGTCGAAAC 351 CGCACAAAAC CTCTACAATC AGGCACTCAA
ACACTATAAA AGCGGCAAGT 401 TTTCTGCCGC TGCCTCCCTG TTGAAAGGCG
CGGACGGAGG CGACGGCGGC 451 AGCATCGCGC AACGCAGTAT GTACCTGTTG
CTGCAAAGCA GGGCGCGTAT 501 GGGCAACTGC GAATCCGTCA TCGAAATCGG
AGGGCGTTAC GCCAACCGTT 551 TCAAAGACAG CCCAACCGCG CCTGAAGCCA
TGTTCAAAAT CGGCGAATGC 601 CAATACAGGC TTCAGCAAAA AGACATTGCA
AGGGCGACTT GGCGCAGCCT 651 GATACAGACC TATCCCGGCA GCCCGGCGGC
AAAACGCGCC GCCGCAGCCG 701 TGCGCAAACG ATAG
This corresponds to the amino acid sequence <SEQ ID 2668; ORF
774>:
TABLE-US-03140 m774.pep 1 MKIKLPLFII WLSVSASCAS VSPVPAGSQT
EMSTRENASD GIPYPVPTLQ 51 DRLDYLEGKI VRLSNEVETL NGKVKALEHA
KTHSSGRAYV QKLDDRKLKE 101 HYLNTEGGSA SAHTVETAQN LYNQALKHYK
SGKFSAAASL LKGADGGDGG 151 SIAQRSMYLL LQSRARMGNC ESVIEIGGRY
ANRFKDSPTA PEAMFKIGEC 201 QYRLQQKDIA RATWRSLIQT YPGSPAAKRA
AAAVRKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 774
shows 92.8% identity over a 237 aa overlap with a predicted ORF
(ORF 774) from N. gonorrhoeae
TABLE-US-03141 m774/g774 92.8% identity in 237 aa overlap 10 20 30
40 50 60 g774.pep
MKTKLPLFIIWLSVSASCASVLPVPEGSRTEMPTQENASDGIPYPVPTLQDRLDYLEGKI ||
|||||||||||||||||| ||| ||:||| |:||||||||||||||||||||||||| m774
MKIKLPLFIIWLSVSASCASVSPVPAGSQTEMSTRENASDGIPYPVPTLQDRLDYLEGKI 10 20
30 40 50 60 70 80 90 100 110 120 g774.pep
VRLSNEVEMLNGKVKALEHTKIHPSGRTYVQKLDDRKLKEHYLNTEGGSASAHTVETAQN
|||||||| ||||||||||:| | |||:|||||||||||||||||||||||||||||||| m774
VRLSNEVETLNGKVKALEHAKTHSSGRAYVQKLDDRKLKEHYLNTEGGSASAHTVETAQN 70 80
90 100 110 120 130 140 150 160 170 180 g774.pep
LYNQALKHYQNGRFSAAAALLKGADGGDGGSIAQRSMYLLLQSRARMGNCESVIEIGGRY
|||||||||::|:|||||:||||||||||||||||||||||||||||||||||||||||| m774
LYNQALKHYKSGKFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGNCESVIEIGGRY 130
140 150 160 170 180 190 200 210 220 230 g774.pep
ANRFKDSPLAPEVIFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAAAVRKRX
||||||||||||::|||||||||||||||||||||||||||||||||||||||||||| m774
ANRFKDSPLAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAAAVRKRX 190 200
210 220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2669>:
TABLE-US-03142 a774.seq 1 ATGAAGACCA AATTACCGCT TTTTATCATT
TGGCTGTCCG TATCCGCCGC 51 CTGTTCTTCC CCTGTTTCCC GCAATATTCA
GGATATGCGG CTCGAACCGC 101 AGGCAGAGGC AGGTAGTTCG GACGCTATTC
CCTATCCCGT TCCCACTCTG 151 CAAGACCGTT TGGATTATCT GGAAGGCACA
CTCGTCCGCC TGTCGAACGA 201 AGTGGAAACC TTAAACGGCA AAGTCAAAGC
ACTGGAGCAT GCGAAAACAC 251 ACCCTTCCAG CAGGGCATAC GTCCAAAAAC
TCGACGACCG CAAGTTGAAA 301 GAGCATTACC TCAATACCGA AGGCGGCAGC
GCATCCGCAC ATACCGTCGA 351 AACCGCACAA AACCTCTACA ATCAGGCACT
CAAACACTAT AAAAGCGGCA 401 GGTTTTCTGC CGCTGCCTCC CTGTTGAAAG
GCGCGGACGG AGGCGACGGC 451 GGCAGCATCG CGCAACGCAG TATGTACCTG
TTGCTGCAAA GCAGGGCGCG 501 TATGGGCAAC TGCGAATCCG TCATCGAAAT
CGGAGGGCGT TACGCCAACC 551 GTTTCAAAGA CAGCCCAACC GCGCCTGAAG
CCATGTTCAA AATCGGCGAA 601 TGCCAATACA GGCTTCAGCA AAAAGACATT
GCAAGGGCGA CTTGGCGCAG 651 CCTGATACAG ACCTATCCCG GCAGCCCGGC
GGCAAAACGC GCCGCCGCAG 701 CCGTGCGCAA ACGATAG
This corresponds to the amino acid sequence <SEQ ID 2670; ORF
774.a>:
TABLE-US-03143 a774.pep 1 MKTKLPLFII WLSVSAACSS PVSRNIQDMR
LEPQAEAGSS DAIPYPVPTL 51 QDRLDYLEGT LVRLSNEVET LNGKVKALEH
AKTHPSSRAY VQKLDDRKLK 101 EHYLNTEGGS ASAHTVETAQ NLYNQALKHY
KSGRFSAAAS LLKGADGGDG 151 GSIAQRSMYL LLQSRARMGN CESVIEIGGR
YANRFKDSPT APEAMFKIGE 201 CQYRLQQKDI ARATWRSLIQ TYPGSPAAKR
AAAAVRKR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 774
shows 89.5% identity over a 238 aa overlap with a predicted ORF
(ORF 774) from N. meningitidis
TABLE-US-03144 m774/a774 89.5% identity in 238 aa overlap 10 20 30
40 50 60 a774.pep
MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIPYPVPTLQDRLDYLEGT ||
|||||||||||||:|:| || : | ::: ::||:||||||||||||||||| m774
MKIKLPLFIIWLSVSASCAS-VSPVPAGSQTEMSTRENASDGIPYPVPTLQDRLDYLEGK 10 20
30 40 50 70 80 90 100 110 120 a774.pep
LVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEHYLNTEGGSASAHTVETAQ
:||||||||||||||||||||||| |:||||||||||||||||||||||||||||||||| m774
IVRLSNEVETLNGKVKALEHAKTHSSGRAYVQKLDDRKLKEHYLNTEGGS ASAHTVETAQ 60 70
80 90 100 110 130 140 150 160 170 180 a774.pep
NLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGNCESVIEIGGR
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| m774
NLYNQALKHYKSGKFSAAASLLKGADGGDGGSIAQRSMYLLLQSRARMGNCESVIEIGGR 120
130 140 150 160 170 190 200 210 220 230 239 a774.pep
YANRFKDSPLAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAAAVRKRX
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m774
YANRFKDSPLAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRAAAAVRKRX 180 190
200 210 220 230
[0428] g790.seq not found yet
[0429] g790.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2671>:
TABLE-US-03145 m790.seq 1 ATGGCAAGAA GGTCAAAAAC ATTTGAAGAA
GCTGCTGCTG AGGTTGAGGA 51 ACGTTTCGGT CATCGTGGCA TTAAGTTGGT
CGAGTTTGAG GGTACAGCCA 101 AGCCGTGTGT AATCAACTGC CCTAAACATG
GAAACCAAAC CTGTTCGAGG 151 TACTCCAATA TGTTCATAGG AAGTAGCTGG
GGTTGCCCCT CTTGTGGTAA 201 TGAGCAAGCT GCAAAAGCCG GTATAGCGAC
CCTTAGGAAG AATCACATAG 251 CGTTAGAAAT GCTGAAACAG GCTGTAACAG
GTATGACCAA GCAAGAGCGC 301 ATCACGACGC AAGCCTACAA TGAGATGACC
AAATCCGTGG CAGGTTCAAA 351 CAGCATAGTC CTTAACGATG TCCAAGGCGA
TACGACCATC AACAACCATC 401 ATACGCATAC GCACAACCAC AGCGATGCCG
ATGGCAAAGC ACTGTCGATG 451 AGGCTCACAC CCCGTCCTTT GTTGTCAGAC
CGTCAGGCGG CGGCTTTCGC 501 CCGTACAGGC AAACTCACGG GCAGTTTCGA
CCTGTTTGCT TCGGTGgTCG 551 CCCCCTCGCA GTACACGTTT GCCGTTGCCA
TGCCCGACAC GTCCATGTCG 601 CCGGTTATCG AAAAGGGAGA CTTGCTGGTG
GTCGAGCCGC GTATGTGCCC 651 TGCGGACGAA GACATCGCGC TGATTGAACT
GTCCGACAAG CGGCTGGTCG 701 TCGCGCACCT TGTTATCGAT ATTGCGGGCA
GGATGCTGAT TTATCAGACG 751 GGCAGGCCGT CTGAAGCCTT TGACCTGCCC
GAAGGCAGCA CGATTTTAGG 801 TGTGGTGCTG GAGTCAAAAA ACGGTTTATG
TCCGCCGCAC AGGCAAGAAG 851 GCGTGTTGAT TCGGATTACC GCCCCTGATG
TGTGGACGGT TGGTATGATT 901 TCCGCTTCCA AAACGTCGTG TACGCGCCCG
ACCGCAGCCC GGAAATCAGC 951 CGTATGCTTT CTTCGATTTT GGCAGGCTAC
GCGTGGGATA CCGAAAACCC 1001 GTTCGTGGCG AAATCCGAAC AACGCCTGA
This corresponds to the amino acid sequence <SEQ ID 2672; ORF
790>:
TABLE-US-03146 m790.pep 1 MARRSKTFEE AAAEVEERFG HRGIKLVEFE
GTAKPCVINC PKHGNQTCSR 51 YSNMFIGSSW GCPSCGNEQA AKAGIATLRK
NHIALEMLKQ AVTGMTKQER 101 ITTQAYNEMT KSVAGSNSIV LNDVQGDTTI
NNHHTHTHNH SDADGKALSM 151 RLTPRPLLSD RQAAAFARTG KLTGSFDLFA
SVVAPSQYTF AVAMPDTSMS 201 PVIEKGDLLV VEPRMCPADE DIALIELSDK
RLVVAHLVID IAGRMLIYQT 251 GRPSEAFDLP EGSTILGVVL ESKNGLCPPH
RQEGVLIRIT APDVWTVGMI 301 SASKTSCTRP TAARKSAVCF LRFWQATRGI
PKTRSWRNPN NA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2673>:
TABLE-US-03147 a790.seq 1 ATGGCAAGAA GGTCAAAAAC ATTTGAAGAA
GCTGCTGCTG AGGTTGAGGA 51 ACGTTTCGGT CATCGTGGCA TTAAGTTGGT
CGAGTTTGAG GGTACAGCCA 101 AGCCGTGTGT AATCAACTGC CCTAAACATG
GAAACCAAAC CTGTTCGAGG 151 TACTCCAATA TGTTCATAGG AAGTAGCTGG
GGTTGCCCCT CTTGTGGTAA 201 TGAGCAAGCT GCAAAAGCCG GTATAGCGAC
CCTTAGGAAG AATCACATAG 251 CGTTAGAAAT GCTGAAACAG GCTGTAACAG
GTATGACCAA GCAAGAGCGC 301 ATCACGACGC AAGCCTACAA TGAGATGACC
AAATCCGTGG CAGGTTCAAA 351 CAGCATAATC CTTAACGATG TCCAAGGCGA
TACGACCATC AACAACCATC 401 ATACGCATAC GCACAACCAC AGCGATGCCG
ACGGCAAAGC ACTGTCGATG 451 AGGCTCACAC CCCGTCCTTT GTTGTCAGAC
CGTCAGGCGG CGGCTTTCGC 501 CCGTACAGGC AAACTCACGG GCAGTTTCGA
CCTGTTTGCT TCGGTGGTCG 551 CCCCTTCACA ATATACGTTT GCCGTTGCCA
TGCCCGACAC GTCCATGTCG 601 CCGGTTATCG AAAAGGGGGA TTTGCTGGTG
GTCGAGCCGC GTATGCGCCC 651 TGCGGACGAA GACATCGTAC TGATTGAACT
GTCCGACAAG CGGCTGGTCG 701 TCGCGCACCT TGTTATCGAT ATTGCGGGCA
GGATGCTGAT TTATCAGACG 751 GGCAGGCCGT CTGAAGCCCT CGACCTGCCC
GAAGGCAGCG TGATTTTAGG 801 TGTGGTGCTG GAGTCAAAAA ACGGTTTATG
TCCGCCGCAC AGGCAAGAAG 851 GCGTGTTGAT TCGGATTACC GCCCCTGATG
TGTGGACGGT TGGTACGATT 901 TCCGCTTCCA AAACGTCGTG TACGCGCCCG
ACCGCAGCCC GGAAATCAGC 951 CGTATGCTTT CTTCGATTTT GGCAGGCTAC
GCGTGGGATA CCGAAAACCC 1001 GTTCGTGGCG AAATCCGAAC AACGCCTGT
This corresponds to the amino acid sequence <SEQ ID 2674; ORF
790.a>:
TABLE-US-03148 a790.pep 1 MARRSKTFEE AAAEVEERFG HRGIKLVEFE
GTAKPCVINC PKHGNQTCSR 51 YSNMFIGSSW GCPSCGNEQA AKAGIATLRK
NHIALEMLKQ AVTGMTKQER 101 ITTQAYNEMT KSVAGSNSII LNDVQGDTTI
NNHHTHTHNH SDADGKALSM 151 RLTPRPLLSD RQAAAFARTG KLTGSFDLFA
SVVAPSQYTF AVAMPDTSMS 201 PVIEKGDLLV VEPRMRPADE DIVLIELSDK
RLVVAHLVID IAGRMLIYQT 251 GRPSEALDLP EGSVILGVVL ESKNGLCPPH
RQEGVLIRIT APDVWTVGTI 301 SASKTSCTRP TAARKSAVCF LRFWQATRGI
PKTRSWRNPN NAC
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 790
shows 98.2% identity over a 342 aa overlap with a predicted ORF
(ORF 790) from N. meningitidis
TABLE-US-03149 a790/m790 98.2% identity in 342 aa overlap 10 20 30
40 50 60 a790.pep
MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHGNQTCSRYSNMFIGSSW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m790
MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHGNQTCSRYSNMFIGSSW 10 20
30 40 50 60 70 80 90 100 110 120 a790.pep
GCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERITTQAYNEMTKSVAGSNSII
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: m790
GCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERITTQAYNEMTKSVAGSNSIV 70 80
90 100 110 120 130 140 150 160 170 180 a790.pep
LNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSDRQAAAFARTGKLTGSFDLFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m790
LNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSDRQAAAFARTGKLTGSFDLFA 130
140 150 160 170 180 190 200 210 220 230 240 a790.pep
SVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPADEDIVLIELSDKRLVVAHLVID
||||||||||||||||||||||||||||||||||| ||||||:||||||||||||||||| m790
SVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMCPADEDIALIELSDKRLVVAHLVID 190
200 210 220 230 240 250 260 270 280 290 300 a790.pep
IAGRMLIYQTGRPSEALDLPEGSVILGVVLESKNGLCPPHRQEGVLIRITAPDVWTVGTI
||||||||||||||||:||||||:|||||||||||||||||||||||||||||||||| | m790
IAGRMLIYQTGRPSEAFDLPEGSTILGVVLESKNGLCPPHRQEGVLIRITAPDVWTVGMI 250
260 270 280 290 300 310 320 330 340 a790.pep
SASKTSCTRPTAARKSAVCFLRFWQATRGIPKTRSWRNPNNAC
|||||||||||||||||||||||||||||||||||||||||| m790
SASKTSCTRPTAARKSAVCFLRFWQATRGIPKTRSWRNPNNAX 310 320 330 340
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2675>:
TABLE-US-03150 g791.seq 1 ATGGTAAATT ATTATTCAGC TATGATTAAA
AAGATTTTAA CTACTTGTTT 51 TGGTTTGTTT TTTGGTTTTT GTGTATTTGG
AGTGGGTCTG GTTGCCATTG 101 CTATTTTGGT AACGTATCCG AAACTGCCGT
CTTTGGATTC TTTGCAGCAT 151 TACCAGCCTA AAATGCCGTT GACTATTTAT
TCGGCGGATG GAGAAGTCAT 201 CGGTATGTAT GGGGAGCAGC GGCGCGAATT
TACAAAAATC GGCGATTTCC 251 CCGAGGTGTT GCGGAATGCG GTTATTGCCG
CCGAGGATAA ACGCTTTTAC 301 CGGCATTGGG GGGTGGATGT TTGGGGTGTT
GCCCGCGCTG CCGTCGGCAA 351 TGTCGTGTCC GGCAGCGTGC AGTCGGGTGC
GAGTACGATT ACACAGCAGG 401 TGGCGAAAAA TTTTTATTTG AGCAGTGAAA
AAACGTTCAC ACGCAAATTC 451 AATGAGGTGT TGCTTGCCTA TAAAATCGAG
CAGTCTTTAA GCAAAGACAA 501 AATCCTTGAG TTGTATTTCA ATCAGATTTA
CCTCGGTCAG CGCGCCTATG 551 GTTTTGCATC TGCCGCGCAA ATCTATTTCA
ATAAGAATGT CCGAGATTTG 601 ACTTTGGCGG AAGCCGCCAT GCTTGCGGGA
CTGCCCAAGG CTCCGTCTGC 651 CTATAATCCG ATTGTTAATC CGGAGCGTGC
CAAGTTGCGC CAGAAGTATA 701 TTTTGAACAA TATGCTCGAG GAGAAGATGA
TTACCGTGCA ACAGCGCGAT 751 CAGGCATTGA ATGAGGAACT GCATTATGAG
CGGTTTGTTC GGAAAATCGA 801 TCAGAGTGCT TTATATGTGG CGGAAATGGT
GCGTCGGGAA CTGTATGAGA 851 AATATGGTGA AGATGCCTAT ACGCAGGGTT
TTAAGGTTTA TACCACGGTC 901 CGCACCGATC ATCAGAAGGC GGCAACCGAG
GCATTGCGCA AGGCTCTACG 951 GAATTTCGAT CGCGGCAGCA GCTACCGCGG
TGCGGAAAAC TATATCGATT 1001 TGAGTAAGAG TGAAGATGTC GAGGAGACTG
TCAGCCAGTA TCTGTCGGGA 1051 CTCTATACCG TCGATAAAAT GGTTCCCGCC
GTTGTGTTGG ATGTTACTAA 1101 AAAGAAAAAT GTCGTCATAC AGCTGCCCGG
CGGCAGGCGG GTTGCGCTTG 1151 ACAGGCGCGC CTTGGGTTTT GCGGCCCGAG
CGGTCGATAA TGAGAAAATG 1201 GGGGAGGACC GTATCCGCAG GGGCGCGGTC
ATCCGTGTCA AAAACAACGG 1251 CGGGCGTTGG GCGGTGGTTC AAGAGCCGTT
GCTGCAGGGG GCTTTGGTTT 1301 CGCTGGATGC AAAAACCGGA GCTGTGCGCG
CGCTGGTCGG CGGTTATGAT 1351 TTTCACAGCA AAACATTCAA TCGTGCCGTT
CAGGCAATGC GGCAGCCGGG 1401 TTCGACCTTT AAGCCGTTTG TCTATTCGGC
GGCATTATCT AAGGGGATGA 1451 CCGCGTCCAC AGTGGTTAAC GATGCGCCGA
TTTCCCTGCC GGGGAAAGGG 1501 CCGAACGGTT CGGTTTGGAC ACCTAAAAAT
TCAGACGGCA GATATTCCGG 1551 CTACATTACT TTGAGACAGG CTCTGACGGC
TTCCAAGAAT ATGGTTTCCA 1601 TCCGTATTTT GATGTCTATC GGTGTCGGTT
ACGCGCAACA GTATATCCGG 1651 CGTTTCGGCT TCAGGCCGTC CGAGCTGCCG
GCAAGCCTGT CTATGGCTTT 1701 AGGTACGGGC GAGACGACGC CGTTGAAAGT
GGCGGAGGCA TATAGTGTAT 1751 TTGCGAACGG CGGATATAGG GTTTCTTCGC
ACGTGATCGA TAAGATTTAT 1801 GACAGAGACG GCAGGTTGCG CGCCCAAATG
CAACCTTTGG TGGCAGGGCA 1851 AAATGCGCCT CAGGCAATCG ATCCGCGCAA
TGCCTATATT ATGTATAAGA 1901 TTATGCAGGA TGTGGTCCGT GTCGGTACGG
CAAGGGGGGC AGCTGCGTTG 1951 GGAAGAACGG ATATTGCCGG TAAAACGGGT
ACGACCAACG ACAATAAAGA 2001 TGCGTGGTTT GTCGGTTTTA ACCCTGATGT
GGTTACTGCC GTATATATCG 2051 GCTTCGACAA ACCTAAGAGT ATGGGGCGTG
CCGGCTACGG CGGTACGATT 2101 GCGGTGCCGG TTTGGGTGGA CTATATGCGT
TTTGCGTTGA AAGGAAAGCA 2151 GGGCAAAGGG ATGAAAATGC CTGAAGGTGT
GGTCAGCAGC AATGGCGAAT 2201 ACTATATGAA GGAACGTATG GTAACCGATC
CGGGCTTGAT GCTGGACAAC 2251 AGCGGTATTG CGCCGCAACC TTCCCGACGG
GCAAAAGAAG ATGATGAAGC 2301 GGCAGTAGAA AACGAACAGC AGGGAAGGTC
TGACGAAACG CGTCAGGACG 2351 TACAGGAAAC GCCGGTGCTT CCGAGCAATA
CGGATTCCAA ACAGCAGCAG 2401 TTGGATTCCC TGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2676; ORF
791.ng>:
TABLE-US-03151 g791.pep 1 MVNYYSAMIK KILTTCFGLF FGFCVFGVGL
VAIAILVTYP KLPSLDSLQH 51 YQPKMPLTIY SADGEVIGMY GEQRREFTKI
GDFPEVLRNA VIAAEDKRFY 101 RHWGVDVWGV ARAAVGNVVS GSVQSGASTI
TQQVAKNFYL SSEKTFTRKF 151 NEVLLAYKIE QSLSKDKILE LYFNQIYLGQ
RAYGFASAAQ IYFNKNVRDL 201 TLAEAAMLAG LPKAPSAYNP IVNPERAKLR
QKYILNNMLE EKMITVQQRD 251 QALNEELHYE RFVRKIDQSA LYVAEMVRRE
LYEKYGEDAY TQGFKVYTTV 301 RTDHQKAATE ALRKALRNFD RGSSYRGAEN
YIDLSKSEDV EETVSQYLSG 351 LYTVDKMVPA VVLDVTKKKN VVIQLPGGRR
VALDRRALGF AARAVDNEKM 401 GEDRIRRGAV IRVKNNGGRW AVVQEPLLQG
ALVSLDAKTG AVRALVGGYD 451 FHSKTFNRAV QAMRQPGSTF KPFVYSAALS
KGMTASTVVN DAPISLPGKG 501 PNGSVWTPKN SDGRYSGYIT LRQALTASKN
MVSIRILMSI GVGYAQQYIR 551 RFGFRPSELP ASLSMALGTG ETTPLKVAEA
YSVFANGGYR VSSHVIDKIY 601 DRDGRLRAQM QPLVAGQNAP QAIDPRNAYI
MYKIMQDVVR VGTARGAAAL 651 GRTDIAGKTG TTNDNKDAWF VGFNPDVVTA
VYIGFDKPKS MGRAGYGGTI 701 AVPVWVDYMR FALKGKQGKG MKMPEGVVSS
NGEYYMKERM VTDPGLMLDN 751 SGIAPQPSRR AKEDDEAAVE NEQQGRSDET
RQDVQETPVL PSNTDSKQQQ 801 LDSLF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2677>:
TABLE-US-03152 m791.seq 1 ATGGTAAATT ATTATTCAGC TATGATTAAA
AAGATTTTAA CGACTTGTTT 51 TGGTTTGGTT TTTGGGTTTT GTGTATTTGG
AGTGGGTTTG GTTGCCATTG 101 CTATTTTGGT AACGTATCCG AAACTGCCGT
CTTTGGATTC TTTGCAGCAT 151 TACCAGCCTA AAATGCCGTT GACTATTTAT
TCGGCGGATG GGGAAGTCAT 201 CGGTATGTAT GGGGAGCAGC GGCGCGAATT
TACAAAAATC GGCGATTTCC 251 CAGAGGTGTT GCGGAATGCG GTTATCGCCG
CCGAGGATAA ACGCTTTTAC 301 CGGCATTGGG GGGTGGATGT TTGGGGTGTT
GCCCGCGCTG CCGTCGGCAA 351 TGTCGTGTCC GGCAGCGTGC AGTCGGGTGC
GAGTACGATT ACGCAGCAGG 401 TGGCGAAAAA TTTTTATTTG AGCAGTGAAA
AAACGTTCAC ACGCAAATTC 451 AATGAGGTGT TGCTTGCCTA TAAAATCGAG
CAGTCTTTAA GCAAAGACAA 501 AATCCTCGAG TTGTATTTCA ATCAGATTTA
CCTCGGTCAG CGCGCCTATG 551 GTTTTGCATC TGCCGCGCAA ATCTATTTCA
ATAAGAATGT CCGAGATTTG 601 ACTTTGGCGG AAGCCGCCAT GCTTGCGGGA
CTGCCCAAGG CTCCGTCTGC 651 CTATAATCCG ATTGTTAATC CAGAACGTGC
CAAGTTGCGC CAGAAGTATA 701 TTTTGAACAA TATGCTCGAG GAGAAGATGA
TTACCGTGCA ACAGCGCGAT 751 CAGGCGTTGA ATGAGGAACT GCATTACGAG
CGGTTTGTTC GGAAAATCGA 801 TCAGAGTGCG TTATATGTGG CGGAAATGGT
GCGTCAGGAA CTGTATGAGA 851 AATACGGTGA AGATGCCTAT ACGCAGGGTT
TTAAGGTTTA TACCACGGTC 901 CGCGCCGATC ATCAGAAGGT GGCAACCGAG
GCATTGCGCA AGGCTCTACG 951 GAATTTCGAT CGCGGCAGCA GCTACCGCGG
TGCGGAAAAC TATATCGATT 1001 TGAGTAAGAG TGAAGATGTC GAGGAGACTG
TCAGCCAGTA TCTGTCGGGA 1051 CTCTATACCG TCGATAAAAT GGTTCCCGCC
GTTGTGTTGG ATGTGACTAA 1101 AAAGAAAAAT GTCGTCATAC AGCTGCCCGG
CGGCAGGCGG GTTACGCTTG 1151 ACAGGCGCGC CTTGGGTTTT GCGGCCCGCG
CGGTCAATAA TGAAAAAATG 1201 GGGGAGGACC GTATCCGCAG GGGCGCGGTC
ATCCGTGTCA AAAACAACGG 1251 CGGGCGTTGG GCGGTGGTTC AAGAGCCGTT
GCTGCAGGGG GCTTTGGGTT 1301 CGCTGGATGC AAAAACCGGA GCTGTGCGCG
CGCTGGTCGG CGGTTATGAT 1351 TTTCACAGCA AAACATTCAA TCGTGCCGTT
CAGGCAATGC GGCAGCCGGG 1401 TTCGACCTTT AAGCCGTTTG TCTATTCGGC
GGCATTATCT AAGGGGATGA 1451 CCGCGTCCAC AGTGGTTAAC GATGCGCCGA
TTTCCCTGCC GGGGAAAGGG 1501 CCGAACGGTT CGGTTTGGAC ACCTAAAAAT
TCAGACGGCA GATATTCCGG 1551 CTACATTACT TTGAGACAGG CTCTGACGGC
TTCCAAGAAT ATGGTTTCCA 1601 TCCGTATTTT GATGTCTATC GGTGTCGGTT
ACGCGCAACA GTATATCCGG 1651 CGTTTCGGCT TCAGGTCGTC CGAGCTGCCG
GCAAGCCTGT CTATGGCTTT 1701 AGGTACGGGC GAGACAACGC CGTTGAAAGT
GGCGGAGGCA TATAGCGTAT 1751 TTGCGAACGG CGGATATAGG GTTTCTTCGC
ACGTAATCGA TAAGATTTAT 1801 GACAGAGACG GCAGGTTGCG CGCCCAAATG
CAACCTTTGG TGGCTGGGCA 1851 AAATGCGCCT CAGGCAATCG ATCCGCGCAA
TGCCTATATT ATGTATAAGA 1901 TTATGCAGGA TGTGGTCCGT GTTGGTACGG
CAAGGGGGGC AGCTGCGTTG 1951 GGAAGAACGG ATATTGCCGG TAAAACGGGT
ACGACCAATG ACAATAAGGA 2001 TGCGTGGTTT GTCGGTTTTA ACCCTGATGT
GGTTACTGCC GTATATATCG 2051 GCTTCGACAA ACCTAAGAGT ATGGGGCGTG
TCGGCTACGG CGGTACGATT 2101 GCGGTGCCGG TTTGGGTGGA CTATATGCGT
TTTGCGTTGA AAGGAAAGCA 2151 GGGCAAGGGG ATGAAAATGC CTGAAGGTGT
GGTCAGCAGC AATGGCGAAT 2201 ACTATATGAA GGAACGTATG GTAACCGATC
CGGGCTTGAC GCTGGACAAC 2251 AGCGGTATTG CGCCGCAACC TTCCCGACGG
GCAAAAGAAG ATGACGGGGG 2301 CGCGGCAGAA GGCGGACGGC AGGCGGCGGA
TGACGAAGTC CGCCAAGATA 2351 TGCAGGAAAC GCCGGTGCTT CCGAGTAATA
CTGGTTCCAA ACAGCAGCAG 2401 TTGGATTCTC TGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2678; ORF
791>.
TABLE-US-03153 m791.pep 1 MVNYYSAMIK KILTTCFGLV FGFCVFGVGL
VAIAILVTYP KLPSLDSLQH 51 YQPKMPLTIY SADGEVIGMY GEQRREFTKI
GDFPEVLRNA VIAAEDKRFY 101 RHWGVDVWGV ARAAVGNVVS GSVQSGASTI
TQQVAKNFYL SSEKTFTRKF 151 NEVLLAYKIE QSLSKDKILE LYFNQIYLGQ
RAYGFASAAQ IYFNKNVRDL 201 TLAEAAMLAG LPKAPSAYNP IVNPERAKLR
QKYILNNMLE EKMITVQQRD 251 QALNEELHYE RFVRKIDQSA LYVAEMVRQE
LYEKYGEDAY TQGFKVYTTV 301 RADHQKVATE ALRKALRNFD RGSSYRGAEN
YIDLSKSEDV EETVSQYLSG 351 LYTVDKMVPA VVLDVTKKKN VVIQLPGGRR
VTLDRRALGF AARAVNNEKM 401 GEDRIRRGAV IRVKNNGGRW AVVQEPLLQG
ALGSLDAKTG AVRALVGGYD 451 FHSKTFNRAV QAMRQPGSTF KPFVYSAALS
KGMTASTVVN DAPISLPGKG 501 PNGSVWTPKN SDGRYSGYIT LRQALTASKN
MVSIRILMSI GVGYAQQYIR 551 RFGFRSSELP ASLSMALGTG ETTPLKVAEA
YSVFANGGYR VSSHVIDKIY 601 DRDGRLRAQM QPLVAGQNAP QAIDPRNAYI
MYKIMQDVVR VGTARGAAAL 651 GRTDIAGKTG TTNDNKDAWF VGFNPDVVTA
VYIGFDKPKS MGRVGYGGTI 701 AVPVWVDYMR FALKGKQGKG MKMPEGVVSS
NGEYYMKERM VTDPGLTLDN 751 SGIAPQPSRR AKEDDGGAAE GGRQAADDEV
RQDMQETPVL PSNTGSKQQQ 801 LDSLF* g791/m791 97.3% identity in 805 aa
overlap 10 20 30 40 50 60 g791.pep
MVNYYSAMIKKILTTCFGLFFGFCVFGVGLVAIAILVTYPKLPSLDSLQHYQPKMPLTIY
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| m791
MVNYYSAMIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHYQPKMPLTIY 10 20
30 40 50 60 70 80 90 100 110 120 g791.pep
SADGEVIGMYGEQRREFTKIGDFFEVLRNAVIAAEDKRFYRHWGVDVWGVARAAVGNVVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
SADGEVIGMYGEQRREFTKIGDFFEVLRNAVIAAEDKRFYRHWGVDVWGVARAAVGNVVS 70 80
90 100 110 120 130 140 150 160 170 180 g791.pep
GSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
GSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQ 130
140 150 160 170 180 190 200 210 220 230 240 g791.pep
RAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
RAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLE 190
200 210 220 230 240 250 260 270 280 290 300 g791.pep
EKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRRELYEKYGEDAYTQGFKVYTTV
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m791
EKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYEKYGEDAYTQGFKVYTTV 250
260 270 280 290 300 310 320 330 340 350 360 g791.pep
RTDHQKAATEALRKALRNFDRGSSYRGAENYIDLSKSEDVEETVSQYLSGLYTVDKMVPA
|:||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
RADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVEETVSQYLSGLYTVDKMVPA 310
320 330 340 350 360 370 380 390 400 410 420 g791.pep
VVLDVTKKKNVVIQLPGGRRVALDRRALGFAARAVDNEKMGEDRIRRGAVIRVKNNGGRW
|||||||||||||||||||||:|||||||||||||:|||||||||||||||||||||||| m791
VVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEKMGEDRIRRGAVIRVKNNGGRW 370
380 390 400 410 420 430 440 450 460 470 480 g791.pep
AVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFNRAVQAMRQPGSTFKPFVYSAALS
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| m791
AVVQEPLLQGALGSLDAKTGAVRALVGGYDFHSKTFNRAVQAMRQPGSTFKPFVYSAALS 430
440 450 460 470 480 490 500 510 520 530 540 g791.pep
KGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRYSGYITLRQALTASKNMVSIRILMSI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
KGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRYSGYITLRQALTASKNMVSIRILMSI 490
500 510 520 530 540 550 560 570 580 590 600 g791.pep
GVGYAQQYIRRFGFRPSELPASLSMALGTGETTPLKVAEAYSVFANGGYRVSSHVIDKIY
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| m791
GVGYAQQYIRRFGFRSSELPASLSMALGTGETTPLKVAEAYSVFANGGYRVSSHVIDKIY 550
560 570 580 590 600 610 620 630 640 650 660 g791.pep
RDGRLRAQMQPLVAGQNAPQAIDPRNAYIMYKIMQDVVRVGLARGAAALGRTDIAGKTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
DRDGRLRAQMQPLVAGQNAPQAIDPRNAYIMYKIMQDVVRVGLARGAAALGRTDIAGKTG 610
620 630 640 650 660 670 680 690 700 710 720 g791.pep
TNDNKDAWFVGFNPDVVTAVYIGFDKPKSMGRAGYGGLIAVPVWVDYMRFALKGKQGKG
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| m791
TTNDNKDAWFVGFNPDVVTAVYIGFDKPKSMGRVGYGGTIAVPVWVDYMRFALKGKQGKG 670
680 690 700 710 720 730 740 750 760 770 780 g791.pep
KMPEGVVSSNGEYYMKERMVTDPGLMLDNSGIAPQPSRRAKEDDEAAVENEQQGRSDET
|||||||||||||||||||||||||| |||||||||||||||||| :|:|: :|: :||: m791
MKMPEGVVSSNGEYYMKERMVTDPGLTLDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEV 730
740 750 760 770 780 790 800 g791.pep RQDVQETPVLPSNTDSKQQQLDSLFX
|||:|||||||||| ||||||||||| m791 RQDMQETPVLPSNTGSKQQQLDSLFX 790
800
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2679>:
TABLE-US-03154 a791.seq 1 ATGGTAAATT ATTATTCAGC TATGATTAAA
AAGATTTTAA CGACTTGTTT 51 TGGTTTGGTT TTTGGGTTTT GTGTATTTGG
AGTGGGTTTG GTTGCCATTG 101 CTATTTTGGT AACGTATCCG AAACTGCCGT
CTTTGGATTC TTTGCAGCAT 151 TACCAGCCTA AAATGCCGTT GACTATTTAT
TCGGCGGATG GGGAAGTCAT 201 CGGTATGTAT GGGGAGCAGC GGCGCGAATT
TACAAAAATC GGCGATTTCC 251 CAGAGGTGTT GCGGAATGCG GTTATCGCCG
CCGAGGATAA ACGCTTTTAC 301 CGGCATTGGG GGGTGGATGT TTGGGGTGTT
GCCCGCGCTG CCGTCGGCAA 351 TGTCGTGTCC GGCAGCGTGC AGTCGGGTGC
GAGTACGATT ACGCAGCAGG 401 TGGCGAAAAA TTTTTATTTG AGCAGTGAAA
AAACGTTCAC ACGCAAATTC 451 AATGAGGTGT TGCTTGCCTA TAAAATCGAG
CAGTCTTTAA GCAAAGACAA 501 AATCCTCGAG TTGTATTTCA ATCAGATTTA
CCTCGGTCAG CGCGCCTATG 551 GTTTTGCATC TGCCGCGCAA ATCTATTTCA
ATAAGAATGT CCGAGATTTG 601 ACTTTGGCGG AAGCCGCCAT GCTTGCGGGA
CTGCCCAAGG CTCCGTCTGC 651 CTATAATCCG ATTGTTAATC CAGAACGTGC
CAAGTTGCGC CAGAAGTATA 701 TTTTGAACAA TATGCTCGAG GAGAAGATGA
TTACCGTGCA ACAGCGCGAT 751 CAGGCGTTGA ATGAGGAACT GCATTACGAG
CGGTTTGTTC GGAAAATCGA 801 TCAGAGTGCT TTATATGTGG CGGAAATGGT
GCGTCAGGAA CTGTATGAGA 851 AATACGGTGA AGATGCCTAT ACGCAGGGTT
TTAAGGTTTA TACCACGGTC 901 CGCGCCGATC ATCAGAAGGT GGCAACCGAG
GCATTGCGCA AGGCTCTACG 951 GAATTTCGAT CGCGGCAGCA GCTACCGCGG
TGCGGAAAAC TATATCGATT 1001 TGAGTAAGAG TGAAGATGTC GAGGAGACTG
TCAGCCAGTA TCTGTCGGGA 1051 CTCTATACCG TCGATAAAAT GGTTCCCGCC
GTTGTGTTGG ATGTGACTAA 1101 AAAGAAAAAT GTCGTCATAC AGCTGCCCGG
CGGCAGGCGG GTTACGCTTG 1151 ACAGGCGCGC CTTGGGTTTT GCGGCCCGCG
CGGTCAATAA TGAAAAAATG 1201 GGGGAGGACC GTATCCGCAG GGGCGCGGTC
ATCCGTGTCA AAAACAACGG 1251 CGGGCGTTGG GCGGTGGTTC AAGAGCCGTT
GCTGCAGGGG GCTTTGGTTT 1301 CGCTGGATGC AAAAACCGGA GCTGTGCGCG
CGCTGGTCGG CGGTTATGAT 1351 TTTCACAGCA AAACATTCAA TCGTGCCGTT
CAGGCAATGC GGCAGCCGGG 1401 TTCGACCTTT AAGCCGTTTG TCTATTCGGC
GGCATTATCT AAGGGGATGA 1451 CCGCGTCCAC AGTGGTTAAC GATGCGCCGA
TTTCCCTGCC GGGGAAAGGG 1501 CCGAACGGTT CGGTTTGGAC ACCTAAAAAT
TCAGACGGCA GATATTCCGG 1551 CTACATTACT TTGAGACAGG CTCTGACGGC
TTCCAAGAAT ATGGTTTCCA 1601 TCCGTATTTT GATGTCTATC GGTGTCGGTT
ACGCGCAACA GTATATCCGG 1651 CGTTTCGGCT TCAGGTCGTC CGAGCTGCCG
GCAAGCCTGT CTATGGCTTT 1701 AGGTACGGGC GAGACAACGC CGTTGAAAGT
GGCGGAGGCA TATAGCGTAT 1751 TTGCGAACGG CGGATATAGG GTTTCTTCGC
ACGTAATCGA TAAGATTTAT 1801 GACAGAGACG GCAGGTTGCG CGCCCAAATG
CAACCTTTGG TGGCCGGGCA 1851 AAATGCGCCT CAGGCAATCG ATCCGCGCAA
TGCCTATATT ATGTATAAGA 1901 TTATGCAGGA TGTGGTCCGT GTTGGTACGG
CAAGGGGGGC AGCTGCGTTG 1951 GGAAGAACGG ATATTGCCGG TAAAACGGGT
ACGACCAATG ACAATAAGGA 2001 TGCGTGGTTT GTCGGTTTTA ACCCTGATGT
GGTTACTGCC GTATATATCG 2051 GCTTCGACAA ACCTAAGAGT ATGGGGCGTG
TCGGCTACGG CGGTACGATT 2101 GCGGTGCCGG TTTGGGTGGA CTATATGCGT
TTTGCGTTGA AAGGAAAGCA 2151 GGGCAAGGGG ATGAAAATGC CTGAAGGTGT
GGTCAGCAGC AATGGCGAAT 2201 ACTATATGAA GGAACGTATG GTAACCGATC
CGGGCTTGAC GCTGGACAAC 2251 AGCGGTATTG CGCCGCAACC TTCCCGACGG
GCAAAAGAAG ATGACGGGGG 2301 CGCGGCAGAA GGCGGACGGC AGGCGGCGGA
TGACGAAGTC CGCCAAGATA 2351 TGCAGGAAAC GCCGGTGCTT CCGAGTAATA
CTGGTTCCAA ACAGCAGCAG 2401 TTGGATTCTC TGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2680; ORF
791.a>:
TABLE-US-03155 a791.pep 1 MVNYYSAMIK KILTTCFGLV FGFCVFGVGL
VAIAILVTYP KLPSLDSLQH 51 YQPKMPLTIY SADGEVIGMY GEQRREFTKI
GDFPEVLRNA VIAAEDKRFY 101 RHWGVDVWGV ARAAVGNVVS GSVQSGASTI
TQQVAKNFYL SSEKTFTRKF 151 NEVLLAYKIE QSLSKDKILE LYFNQIYLGQ
RAYGFASAAQ IYFNKNVRDL 201 TLAEAAMLAG LPKAPSAYNP IVNPERAKLR
QKYILNNMLE EKMITVQQRD 251 QALNEELHYE RFVRKIDQSA LYVAEMVRQE
LYEKYGEDAY TQGFKVYTTV 301 RADHQKVATE ALRKALRNFD RGSSYRGAEN
YIDLSKSEDV EETVSQYLSG 351 LYTVDKMVPA VVLDVTKKKN VVIQLPGGRR
VTLDRRALGF AARAVNNEKM 401 GEDRIRRGAV IRVKNNGGRW AVVQEPLLQG
ALVSLDAKTG AVRALVGGYD 451 FHSKTFNRAV QAMRQPGSTF KPFVYSAALS
KGMTASTVVN DAPISLPGKG 501 PNGSVWTPKN SDGRYSGYIT LRQALTASKN
MVSIRILMSI GVGYAQQYIR 551 RFGFRSSELP ASLSMALGTG ETTPLKVAEA
YSVFANGGYR VSSHVIDKIY 601 DRDGRLRAQM QPLVAGQNAP QAIDPRNAYI
MYKIMQDVVR VGTARGAAAL 651 GRTDIAGKTG TTNDNKDAWF VGFNPDVVTA
VYIGFDKPKS MGRVGYGGTI 701 AVPVWVDYMR FALKGKQGKG MKMPEGVVSS
NGEYYMKERM VTDPGLTLDN 751 SGIAPQPSRR AKEDDGGAAE GGRQAADDEV
RQDMQETPVL PSNTGSKQQQ 801 LDSLF* a791/m791 99.9% identity in 805 aa
overlap 10 20 30 40 50 60 a791.pep
MVNYYSAMIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHYQPKMPLTIY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
MVNYYSAMIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHYQPKMPLTIY 10 20
30 40 50 60 70 80 90 100 110 120 a791.pep
SADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWGVARAAVGNVVS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
SADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWGVARAAVGNVVS 70 80
90 100 110 120 130 140 150 160 170 180 a791.pep
GSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
GSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDKILELYFNQIYLGQ 130
140 150 160 170 180 190 200 210 220 230 240 a791.pep
RAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
RAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQKYILNNMLE 190
200 210 220 230 240 250 260 270 280 290 300 a791.pep
EKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYEKYGEDAYTQGFKVYTTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
EKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYEKYGEDAYTQGFKVYTTV 250
260 270 280 290 300 310 320 330 340 350 360 a791.pep
RADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVEETVSQYLSGLYTVDKMVPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
RADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVEETVSQYLSGLYTVDKMVPA 310
320 330 340 350 360 370 380 390 400 410 420 a791.pep
VVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEKMGEDRIRRGAVIRVKNNGGRW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
VVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEKMGEDRIRRGAVIRVKNNGGRW 370
380 390 400 410 420 430 440 450 460 470 480 a791.pep
AVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFNRAVQAMRQPGSTFKPFVYSAALS
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| m791
AVVQEPLLQGALGSLDAKTGAVRALVGGYDFHSKTFNRAVQAMRQPGSTFKPFVYSAALS 430
440 450 460 470 480 490 500 510 520 530 540 a791.pep
KGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRYSGYITLRQALTASKNMVSIRILMSI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
KGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRYSGYITLRQALTASKNMVSIRILMSI 490
500 510 520 530 540 550 560 570 580 590 600 a791.pep
GVGYAQQYIRRFGFRSSELPASLSMALGTGETTPLKVAEAYSVFANGGYRVSSHVIDKIY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
GVGYAQQYIRRFGFRSSELPASLSMALGTGETTPLKVAEAYSVFANGGYRVSSHVIDKIY 550
560 570 580 590 600 610 620 630 640 650 660 a791.pep
DRDGRLRAQMQPLVAGQNAPQAIDPRNAYIMYKIMQDVVRVGTARGAAALGRTDIAGKTG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
DRDGRLRAQMQPLVAGQNAPQAIDPRNAYIMYKIMQDVVRVGTARGAAALGRTDIAGKTG 610
620 630 640 650 660 670 680 690 700 710 720 a791.pep
TTNDNKDAWFVGFNPDVVTAVYIGFDKPKSMGRVGYGGTIAVPVWVDYMRFALKGKQGKG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
TTNDNKDAWFVGFNPDVVTAVYIGFDKPKSMGRVGYGGTIAVPVWVDYMRFALKGKQGKG 670
680 690 700 710 720 730 740 750 760 770 780 a791.pep
MKMPEGVVSSNGEYYMKERMVTDPGLTLDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m791
MKMPEGVVSSNGEYYMKERMVTDPGLTLDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEV 730
740 750 760 770 780 790 800 a791.pep RQDMQETPVLPSNTGSKQQQLDSLFX
|||||||||||||||||||||||||| m791 RQDMQETPVLPSNTGSKQQQLDSLFX 790
800
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2681>:
TABLE-US-03156 g792.seq 1 ATGTTCCGCA TCGTCAAATG GCTGATTGCC
CTGCCCGTCG GCATCTTTAT 51 CTTTTTCAAT GCCTATGTGT ACGGCAACAT
CATCACCTAC CGCGCCGTCG 101 CGCCCCATCG GACTGCCTTT ATGTCGATGC
GGATGAAGCA GTTTGAACAA 151 GAAGGTCGCG ATGTCGCACT GGATTACCGC
TGGGTGCCCT ACAACCGCAT 201 TTCCACCAAC CTGAAAAAAG CCCTGATTGC
TTCCGAAGAT GTCCGTTTTG 251 CCggacacgg gggcttcGat GGGGACGGCa
tTCAAAACGC CATCAGGCGC 301 AACCGGAACA GCGGCGAAGT GAAGGCGGGC
GGATCGACCA TCAGCCAGCA 351 GCTTGCCAAA AACCTCTTCC TCAACGAAAG
CCGCAACTAT CTGCGCAAAG 401 GGGAAGAGGC GGCCATTACG GCAATGATGG
AAGCTGTTAC CGACAAAAAC 451 AGGATTTTCG AACTGTATTT AAACTCAATC
GAATGGCACT ACGGCgtTTT 501 CGGCGCGGAA GCTGCGTCCC GGtatTttTA
TAAAAAACCG GCcgcaGACC 551 TGACcAAACA GCAggcggcG aaactgacgg
tactcgtccc cgccccgttt 601 tactactctg accatccaaa aagcaaacgg
ctgcgcaaca aaaccaatat 651 cgtgctcaga cgcatgggtt cggcaaatta
ccccaaagcg aaacggactg 701 attgttccag atatggaaat gccgcctgaa
ctggggttcg aacggcatat 751 gttttctggg acttataa
This corresponds to the amino acid sequence <SEQ ID 2682; ORF
792.ng>:
TABLE-US-03157 g792.pep 1 MFRIVKWLIA LPVGIFIFFN AYVYGNIITY
RAVAPHRTAF MSMRMKQFEQ 51 EGRDVALDYR WVPYNRISTN LKKALIASED
VRFAGHGGFD GDGIQNAIRR 101 NRNSGEVKAG GSTISQQLAK NLFLNESRNY
LRKGEEAAIT AMMEAVTDKN 151 RIFELYLNSI EWHYGVFGAE AASRYFYKKP
AADLTKQQAA KLTVLVPAPF 201 YYSDHPKSKR LRNKTNIVLR RMGSANYPKA
KRTDCSRYGN AA*TGVRTAY 251 VFWDL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2683>:
TABLE-US-03158 m792.seq 1 ATGTTCCGCA TCATCAAATG GCTGATTGCC
CTGCCCGTCG GCATCTTTAT 51 CTTTTTCAAT GCCTATGTGT ACGGCAACAT
CATTACCTAC CGCGCCGTCG 101 CGCCCCATCG GACTGCCTTT ATGTCGATGC
GGATGAAGCA GTTTGAACAG 151 GAAGGTCGCG ATGTCGCACT GGATTACCGC
TGGATGCCCT ACAAACGCAT 201 TTCCACCAAC CTGAAAAAAG CCCTGATTGC
TTCCGAAGAT GCCCGTTTCG 251 CCGGGCACGG CGGCTTCGAT TGGGGCGGCA
TTCAAAACGC CATCAGGCGC 301 AACCGGAACA GCGGCAAAGT GAAGGCGGGC
GGCTCGACCA TCAGCCAGCA 351 GCTTGCCAAA AACCTGTTTT TAAACGAAAG
CCGCAGCTAT ATCCGCAAAG 401 GCGAAGAAGC GGCGATTACC GCGATGATGG
AAGCCGTTAC CGACAAAGAC 451 AGGATTTTTG AACTGTATTT AAACTCAATC
GAATGGCACT ACGGCGTTTT 501 CGGCGCGGAA GCCGCGTCCC GGTATTTTTA
TCAAATACCC GCCGCCAAGC 551 TGACCAAACA GCAGGCGGCA AAACTGACGG
CGCGCGTCCC CGCCCCGCTC 601 TACTACGCCG ACCATCCGAA AAGCAAACGG
CTCCGCAACA AAACCAATAT 651 CGTGCTCAAA CGCATGGGTT CGGCAGAGTT
GCCTGAAAGC GACACGGACT 701 GA
This corresponds to the amino acid sequence <SEQ ID 2684; ORF
792>:
TABLE-US-03159 m792.pep 1 MFRIIKWLIA LPVGIFIFFN AYVYGNIITY
RAVAPHRTAF MSMRMKQFEQ 51 EGRDVALDYR WMPYKRISTN LKKALIASED
ARFAGHGGFD WGGIQNAIRR 101 NRNSGKVKAG GSTISQQLAK NLFLNESRSY
IRKGEEAAIT AMMEAVTDKD 151 RIFELYLNSI EWHYGVFGAE AASRYFYQIP
AAKLTKQQAA KLTARVPAPL 201 YYADHPKSKR LRNKTNIVLK RMGSAELPES DTD*
g792/m792 90.4% identity in 230 aa overlap 10 20 30 40 50 60
g792.pep
MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMRMKQFEQEGRDVALDYR
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| m792
MFRIIKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMRMKQFEQEGRDVALDYR 10 20
30 40 50 60 70 80 90 100 110 120 g792.pep
WVPYNRISTNLKKALIASEDVRFAGHGGFDGDGIQNAIRRNRNSGEVKAGGSTISQQLAK
|:||:|||||||||||||||:||||||||| |||||||||||||:|||||||||||||| m792
WMPYKRISTNLKKALIASEDARFAGHGGFDWGGIQNAIRRNRNSGKVKAGGSTISQQLAK 70 80
90 100 110 120 130 140 150 160 170 180 g792.pep
NLFLNESRNYLRKGEEAAITAMMEAVTDKNRIFELYLNSIEWHYGVFGAEAASRYFYKKP
||||||||:|:||||||||||||||||||:|||||||||||||||||||||||||||: | m792
NLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSIEWHYGVFGAEAASRYFYQIP 130
140 150 160 170 180 190 200 210 220 230 240 g792.pep
AADLTKQQAAKLTVLVPAPFYYSDHPKSKRLRNKTNIVLRRMGSANYPKAKRTDCSRYGN ||
||||||||||: ||||:||:||||||||||||||||:|||||: |:: m792
AAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIVLKRMGSAELPESDTDX 190 200 210
220 230 250 g792.pep AAXTGVRTAYVFWDLX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2685>:
TABLE-US-03160 a792.seq 1 ATGTTCCGCA TCATCAAATG GCTGATTGCC
CTGCCCGTCG GCATCTTTAT 51 CTTTTTCAAT GCCTATGTGT ACGGCAACAT
CATTACCTAC CGCGCCGTCG 101 CGCCCCATCG GACTGCCTTT ATGTCGATGC
GGATGAAGCA GTTTGAACAG 151 GAAGGTCGCG ATGTCGCACT GGATTACCGC
TGGATGCCCT ACAAACGCAT 201 TTCCACCAAC CTGAAAAAAG CCCTGATTGC
TTCCGAAGAT GCCCGTTTCG 251 CCGGGCACGG CGGCTTCGAT TGGGGCGGCA
TTCAAAACGC CATCAGGCGC 301 AACCGGAACA GCGGCAAAGT GAAGGCGGGC
GGCTCGACCA TCAGCCAGCA 351 GCTTGCCAAA AACCTGTTTT TAAACGAAAG
CCGCAGCTAT ATCCGCAAAG 401 GCGAAGAAGC GGCGATTACC GCGATGATGG
AAGCCGTTAC CGACAAAGAC 451 AGGATTTTTG AACTGTATTT AAACTCAATC
GAATGGCACT ACGGCGTTTT 501 CGGCGCGGAA GCCGCGTCCC GGTATTTTTA
TCAAATACCC GCCGCCAAGC 551 TGACCAAACA GCAGGCGGCA AAACTGACGG
CGCGCGTCCC CGCCCCGCTC 601 TACTACGCCG ACCATCCGAA AAGCAAACGG
CTCCGCAACA AAACCAATAT 651 CGTGCTCAGA CGCATGGGTT CGGCAGAGTT
GCCTGAAAGC GACACGGACT 701 GA
This corresponds to the amino acid sequence <SEQ ID 2686; ORF
792.a>:
TABLE-US-03161 a792.pep 1 MFRIIKWLIA LPVGIFIFFN AYVYGNIITY
RAVAPHRTAF MSMRMKQFEQ 51 EGRDVALDYR WMPYKRISTN LKKALIASED
ARFAGHGGFD WGGIQNAIRR 101 NRNSGKVKAG GSTISQQLAK NLFLNESRSY
IRKGEEAAIT AMMEAVTDKD 151 RIFELYLNSI EWHYGVFGAE AASRYFYQIP
AAKLTKQQAA KLTARVPAPL 201 YYADHPKSKR LRNKTNIVLR RMGSAELPES DTD*
m792/a792 99.6% identity in 233 aa overlap 10 20 30 40 50 60
a792.pep
MFRIIKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMRMKQFEQEGRDVALDYR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m792
MFRIIKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMRMKQFEQEGRDVALDYR 10 20
30 40 50 60 70 80 90 100 110 120 a792.pep
WMPYKRISTNLKKALIASEDARFAGHGGFDWGGIQNAIRRNRNSGKVKAGGSTISQQLAK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m792
WMPYKRISTNLKKALIASEDARFAGHGGFDWGGIQNAIRRNRNSGKVKAGGSTISQQLAK 70 80
90 100 110 120 130 140 150 160 170 180 a792.pep
NLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSIEWHYGVFGAEAASRYFYQIP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m792
NLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSIEWHYGVFGAEAASRYFYQIP 130
140 150 160 170 180 190 200 210 220 230 a792.pep
AAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIVLRRMGSAELPESDTDX
|||||||||||||||||||||||||||||||||||||||:|||||||||||||| m792
AAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIVLKRMGSAELPESDTDX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2687>:
TABLE-US-03162 g793.seq 1 ATGTTGATTA AAAGCGAATA TAAGCCCCGG
ATGCTGCCCA AAGAAGAGCA 51 GGTCAAAAAG CCGATGACCA GTAACGGACG
GATTAGCTTC GTCCTGATGG 101 CAATGGCGGT CTTGTTTGCC TGTCTGATTG
CCCGCGGGCT GTATCTGCAG 151 ACGGTAACGT ATAACTTTTT GAAAGAACAG
GGCGACAACC GGATTGTGCG 201 GACTCAAGCA TTGCCGGCTA CACGCGGTAC
GGTTTCGGAC CGGAACGGTG 251 CGGTTTTGGC GTTGAGCGCG CCGACGGAGT
CCCTGTTTGC CGTGCCTAAA 301 GATATGAAGG AAATGCCGTC TGCCGCCCAA
TTGGAACGCC TGTCCGAGCT 351 TGTCGATGTG CCGGTCGATG TTTTGAGGAA
CAAACTCGAA CAGAAAGGCA 401 AGTCGTTTAT TTGGATCAAG CGGCAGCTCG
ATCCCAAGGT TGCCGAAGAG 451 GTCAAAGCCT TGGGTTTGGA AAACTTTGTA
TTTGAAAAAG AATTAAAACG 501 CCATTACCCG ATGGGCAACC TGTTTGCACA
CGTCATCGGA TTTACCGATA 551 TTGACGGCAA AGGTCAGGAA GGTTTGGAAC
TTTCGCTTGA AGACAGCCTG 601 TATGGCGAAG ACGGCGCGGA AGTTGTTTTG
CGGGACCGGC AGGGCAATAT 651 TGTGGACAGC TTGGACTCCC CGCGCAATAA
AGCACCGCAA AACGGCAAAG 701 ACATCATCCT TTCCCTCGAT CAGAGGATTC
AGACCTTGGC CTATGAAGAG 751 TTGAACAAGG CGGTCGAATA CCATCAGGCA
AAAGCCGGAA CGGTGGTGGT 801 TTTGGATGCC CGCACGGGGG AAATCCTCGC
CTTGGCCAAT ACGCCCGCCT 851 ACGATCCCAA CAGACCCGGC CGGGCAGACA
GCGAACAGCG GCGCAACCGT 901 GCCGTAACCG ATATGATCGA ACCTGGTTCG
GCAATCAAAC CGTTCGTGAT 951 TGCGAAGGCA TTGGATGCGG GCAAAACCGA
TTTGAACGAA CGGCTGAATA 1001 CGCAGCCTTA TAAAATCGGA CCGTCTCCCG
TGCGCGATGA TACCCATGTT 1051 TACCCCTCTT TGGATGTGCG CGGCATTATG
CAGAAATCGT CCAACGTCGG 1101 CACAAGCAAA CTGTCTGCGC GTTTCGGCGC
CGAAGAAATG TATGACTTCT 1151 ATCATGAATT GGGCATCGGT GTGCGTATGC
ACTCGGGCTT TCCGGGGGAA 1201 ACTGCAGGTT TGTTGAGAAA TTGGCGCAGG
TGGCGGCCCA TCGAACAGGC 1251 GACGATGTCT TTCGGTTACG GTCTGCAATT
GAGCCTGCTG CAATTGGCGC 1301 GCGCCTATAC CGCACTGACG CACGACGGCG
TTTTGCTGCC GCTCAGCTTT 1351 GAGAAGCAGG CGGTTGCGCC GCAAGGCAAA
CGCATATTCA AAGAATCGAC 1401 CGCGCGCGAG GTACGCAATC TGATGGTTTC
CGTAACCGAG CCGGGCGGCA 1451 CCGGTACGGC GGGTGCGGTG GACGGTTTCG
ATGTCGGCGC TAAAACCGGC 1501 ACGGCGCGCA AGTTCGTCAA CGGGCGTTAT
GCCGACAACA AACACGTCGC 1551 TACCTTTATC GGTTTTGCCC CCGCCAAAAA
CCCCCGTGTG ATTGTGGCGG 1601 TAACCATCGA CGAACCGACT GCCCACGGCT
ATTACGGCGG CGTAGTGGCA 1651 GGGCCGCCCT TCAAAAAAAT TATGGGCGGC
AGCCTGAACA TCTTGGGCAT 1701 TTCCCCGACC AAGCCACTGA CCGCCGCAGC
CGTCAAAACA CCGTCTTAA
This corresponds to the amino acid sequence <SEQ ID 2688; ORF
793.ng>:
TABLE-US-03163 g793.pep 1 MLIKSEYKPR MLPKEEQVKK PMTSNGRISF
VLMAMAVLFA CLIARGLYLQ 51 TVTYNFLKEQ GDNRIVRTQA LPATRGTVSD
RNGAVLALSA PTESLFAVPK 101 DMKEMPSAAQ LERLSELVDV PVDVLRNKLE
QKGKSFIWIK RQLDPKVAEE 151 VKALGLENFV FEKELKRHYP MGNLFAHVIG
FTDIDGKGQE GLELSLEDSL 201 YGEDGAEVVL RDRQGNIVDS LDSPRNKAPQ
NGKDIILSLD QRIQTLAYEE 251 LNKAVEYHQA KAGTVVVLDA RTGEILALAN
TPAYDPNRPG RADSEQRRNR 301 AVTDMIEPGS AIKPFVIAKA LDAGKTDLNE
RLNTQPYKIG PSPVRDDTHV 351 YPSLDVRGIM QKSSNVGTSK LSARFGAEEM
YDFYHELGIG VRMHSGFPGE 401 TAGLLRNWRR WRPIEQATMS FGYGLQLSLL
QLARAYTALT HDGVLLPLSF 451 EKQAVAPQGK RIFKESTARE VRNLMVSVTE
PGGTGTAGAV DGFDVGAKTG 501 TARKFVNGRY ADNKHVATFI GFAPAKNPRV
IVAVTIDEPT AHGYYGGVVA 551 GPPFKKIMGG SLNILGISPT KPLTAAAVKT PS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2689>:
TABLE-US-03164 m793.seq 1 ATGTTGATTA AGAGCGAATA TAAGCCTCGG
ATGCTGCCCA AAGAAGAGCA 51 GGTCAAAAAG CCGATGACCA GTAACGGACG
GATCAGCTTC GTCCTGATGG 101 CAATAGCGGT CTTGTTTGCC GGTCTGATTG
CTCGCGGACT GTATCTGCAG 151 ACGGTAACGT ATAACTTTTT GAAAGAACAG
GGCGACAACC GGATTGTGCG 201 GACTCAAACA TTGCCGGCTA CACGCGGTAC
GGTTTCGGAC CGGAACGGTG 251 CGGTTTTGGC GTTGAGTGCG CCGACGGAGT
CCCTGTTTGC CGTGCCTAAA 301 GAGATGAAGG AAATGCCGTC TGCCGCACAA
TTGGAACGCC TGTCCGAGCT 351 TGTCGATGTG CCGGTTGATG TTTTGAGGAA
CAAGCTCGAA CAGAAAGGCA 401 AGTCGTTTAT CTGGATTAAG CGGCAGCTCG
ATCCCAAGGT TGCCGAAGAG 451 GTCAAAGCCT TGGGTTTGGA AAACTTTGTA
TTTGAAAAAG AATTAAAACG 501 CCATTACCCG ATGGGCAACC TGTTTGCACA
CGTCATCGGA TTTACCGATA 551 TTGACGGCAA AGGTCAGGAA GGTTTGGAAC
TTTCGCTTGA AGACAGCCTG 601 CATGGCGAAG ACGGCGCGGA AGTCGTTTTG
CGGGACCGGC AGGGCAATAT 651 TGTGGACAGC TTGGACTCCC CGCGCAATAA
AGCCCCGAAA AACGGCAAAG 701 ACATCATCCT TTCCCTCGAT CAGAGGATTC
AGACCTTGGC CTATGAAGAG 751 TTGAACAAGG CGGTCGAATA CCATCAGGCA
AAAGCCGGAA CGGTGGTGGT 801 TTTGGATGCC CGCACGGGGG AAATCCTCGC
CTTGGCCAAT ACGCCCGCCT 851 ACGATCCCAA CAGGCCCGGC CGGGCAGACA
GCGAACAGCG GCGCAACCGT 901 GCCGTAACCG ATATGATCGA ACCCGGTTCG
GCAATCAAAC CGTTTGTGAT 951 TGCGAAGGCA TTGGATGCGG GCAAAACCGA
TTTGAACGAA CGGCTGAATA 1001 CGCAGCCTTA TAAAATCGGA CCGTCTCCCG
TGCGCGATAC CCATGTTTAC 1051 CCCTCTTTGG ATGTGCGCGG CATCATGCAG
AAATCGTCCA ACGTCGGCAC 1101 AAGCAAACTG TCTGCGCGTT TCGGTGCCGA
AGAAATGTAT GACTTCTATC 1151 ATGAGTTGGG CATCGGTGTG CGTATGCACT
CGGGCTTTCC GGGCGAAACT 1201 GCAGGTTTGT TGAGAAATTG GCGCAGGTGG
CGGCCTATCG AACAGGCGAC 1251 GATGTCTTTC GGTTACGGCC TGCAATTGAG
CCTGCTGCAA TTGGCGCGCG 1301 CCTATACCGC ACTGACGCAC GACGGCGTTT
TACTGCCGGT CAGCTTTGAA 1351 AAACAGGCGG TTGCGCCGCA AGGCAAACGC
ATATTCAAAG AATCGACCGC 1401 GCGCGAGGTA CGCAATCTGA TGGTTTCCGT
AACCGAGCCG GGCGGCACCG 1451 GTACGGCGGG TGCGGTGGAC GGTTTCGATG
TCGGCGCGAA AACCGGCACG 1501 GCGCGCAAGT TCGTCAACGG GCGTTATGCC
GACAACAAAC ACATCGCTAC 1551 CTTTATCGGT TTTGCCCCCG CCAAAAATCC
CCGTGTGATT GTGGCGGTAA 1601 CCATTGACGA ACCGACTGCC CACGGTTATT
ACGGCGGCGT AGTGGCAGGG 1651 CCGCCCTTCA AAAAAATTAT GGGCGGCAGC
CTGAACATCT TGGGCATTTC 1701 CCCGACCAAG CCACTGACCG CCGCAGCCGT
CAAAACACCG TCTTAA
This corresponds to the amino acid sequence <SEQ ID 2690; ORF
793>:
TABLE-US-03165 m793.pep 1 MLIKSEYKPR MLPKEEQVKK PMTSNGRISF
VLMAIAVLFA GLIARGLYLQ 51 TVTYNFLKEQ GDNRIVRTQT LPATRGTVSD
RNGAVLALSA PTESLFAVPK 101 EMKEMPSAAQ LERLSELVDV PVDVLRNKLE
QKGKSFIWIK RQLDPKVAEE 151 VKALGLENFV FEKELKRHYP MGNLFAHVIG
FTDIDGKGQE GLELSLEDSL 201 HGEDGAEVVL RDRQGNIVDS LDSPRNKAPK
NGKDIILSLD QRIQTLAYEE 251 LNKAVEYHQA KAGTVVVLDA RTGEILALAN
TPAYDPNRPG RADSEQRRNR 301 AVTDMIEPGS AIKPFVIAKA LDAGKTDLNE
RLNTQPYKIG PSPVRDTHVY 351 PSLDVRGIMQ KSSNVGTSKL SARFGAEEMY
DFYHELGIGV RMHSGFPGET 401 AGLLRNWRRW RPIEQATMSF GYGLQLSLLQ
LARAYTALTH DGVLLPVSFE 451 KQAVAPQGKR IFKESTAREV RNLMVSVTEP
GGTGTAGAVD GFDVGAKTGT 501 ARKFVNGRYA DNKHIATFIG FAPAKNPRVI
VAVTIDEPTA HGYYGGVVAG 551 PPFKKIMGGS LNILGISPTK PLTAAAVKTP S*
g793/m793 98.5% identity in 582 aa overlap 10 20 30 40 50 60
g793.pep
MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAMAVLFACLIARGLYLQTVTYNFLKEQ
||||||||||||||||||||||||||||||||||:||||| ||||||||||||||||||| m793
MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIARGLYLQTVTYNFLKEQ 10 20
30 40 50 60 70 80 90 100 110 120 g793.pep
GDNRIVRTQALPATRGTVSDRNGAVLALSAPTESLFAVPKDMKEMPSAAQLERLSELVDV
|||||||||:||||||||||||||||||||||||||||||:||||||||||||||||||| m793
GDNRIVRTQLLPATRGTVSDRNGAVLALSAPTESLFAVPKEMKEMPSAAQLERLSELVDV 70 80
90 100 110 120 130 140 150 160 170 180 g793.pep
PVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFVFEKELKRHYPMGNLFAHVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
PVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFVFEKELKRHYPMGNLFAHVIG 130
140 150 160 170 180 190 200 210 220 230 240 g793.pep
FTDIDGKGQEGLELSLEDSLYGEDGAEVVLRDRQGNIVDSLDSPRNKAPQNGKDIILSLD
||||||||||||||||||||:||||||||||||||||||||||||||||:|||||||||| m793
FTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIVDSLDSPRNKAPKNGKDIILSLD 190
200 210 220 230 240 250 260 270 280 290 300 g793.pep
QRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEILALANTPAYDPNRPGRADSEQRRNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
QRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEILALANTPAYDPNRPGRADSEQRRNR 250
260 270 280 290 300 310 320 330 340 350 360 g793.pep
AVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPSPVRDDTHVYPSLDVRGIM
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| m793
AVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPSPVRD-THVYPSLDVRGIM 310
320 330 340 350 360 370 380 390 400 410 420 g793.pep
QKSSNVGTSKLSARFGAEEMYDFYHELGIGVRMHSGFPGETAGLLRNWRRWRPIEQATMS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
QKSSNVGTSKLSARFGAEEMYDFYHELGIGVRMHSGFPGETAGLLRNWRRWRPIEQATMS 360
370 380 390 400 410 430 440 450 460 470 480 g793.pep
FGYGLQLSLLQLARAYTALTHDGVLLPLSFEKQAVAPQGKRIFKESTAREVRNLMVSVTE
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| m793
FGYGLQLSLLQLARAYTALTHDGVLLPVSFEKQAVAPQGKRIFKESTAREVRNLMVSVTE 420
430 440 450 460 470 490 500 510 520 530 540 g793.pep
PGGTGTAGAVDGFDVGAKTGTARKFVNGRYADNKHVATFIGFAPAKNPRVIVAVTIDEPT
|||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||| m793
PGGTGTAGAVDGFDVGAKTGTARKFVNGRYADNKHIATFIGFAPAKNPRVIVAVTIDEPT 480
490 500 510 520 530 550 560 570 580 g793.pep
AHGYYGGVVAGPPFKKIMGGSLNILGISPTKPLTAAAVKTPSX
||||||||||||||||||||||||||||||||||||||||||| m793
AHGYYGGVVAGPPFKKIMGGSLNILGISPTKPLTAAAVKTPSX 540 550 560 570 580
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2691>:
TABLE-US-03166 a793.seq 1 ATGTTGATTA AGAGCGAATA TAAGCCTCGG
ATGCTGCCCA AAGAAGAGCA 51 GGTCAAAAAG CCGATGACCA GTAACGGACG
GATCAGCTTC GTCCTGATGG 101 CAATAGCGGT CTTGTTTGCC GGTCTGATTG
CTCGCGGACT GTATCTGCAG 151 ACGGTAACGT ATAACTTTTT GAAAGAACAG
GGCGACAACC GGATTGTGCG 201 GACTCAAACA TTGCCGGCTA CACGCGGTAC
GGTTTCGGAC CGGAACGGTG 251 CGGTTTTGGC GTTGAGTGCG CCGACGGAGT
CCCTGTTTGC CGTGCCTAAA 301 GAGATGAAGG AAATGCCGTC TGCCGCACAA
TTGGAACGCC TGTCCGAGCT 351 TGTCGATGTG CCGGTTGATG TTTTGAGGAA
CAAGCTCGAA CAGAAAGGCA 401 AGTCGTTTAT CTGGATTAAG CGGCAGCTCG
ATCCCAAGGT TGCCGAAGAG 451 GTCAAAGCCT TGGGTTTGGA AAACTTTGTA
TTTGAAAAAG AATTAAAACG 501 CCATTACCCG ATGGGCAACC TGTTTGCACA
CGTCATCGGA TTTACCGATA 551 TTGACGGCAA AGGTCAGGAA GGTTTGGAAC
TTTCGCTTGA AGACAGCCTG 601 CATGGCGAAG ACGGCGCGGA AGTCGTTTTG
CGGGACCGGC AGGGCAATAT 651 TGTGGACAGC TTGGACTCCC CGCGCAATAA
AGCCCCGAAA AACGGCAAAG 701 ACATCATCCT TTCCCTCGAT CAGAGGATTC
AGACCTTGGC CTATGAAGAG 751 TTGAACAAGG CGGTCGAATA CCATCAGGCA
AAAGCCGGAA CGGTGGTGGT 801 TTTGGATGCC CGCACGGGGG AAATCCTCGC
CTTGGCCAAT ACGCCCGCCT 851 ACGATCCCAA CAGGCCCGGC CGGGCAGACA
GCGAACAGCG GCGCAACCGT 901 GCCGTAACCG ATATGATCGA ACCCGGTTCG
GCAATCAAAC CGTTTGTGAT 951 TGCGAAGGCA TTGGATGCGG GCAAAACCGA
TTTGAACGAA CGGCTGAATA 1001 CGCAGCCTTA TAAAATCGGA CCGTCTCCCG
TGCGCGATAC CCATGTTTAC 1051 CCCTCTTTGG ATGTGCGCGG CATCATGCAG
AAATCGTCCA ACGTCGGCAC 1101 AAGCAAACTG TCTGCGCGTT TCGGTGCCGA
AGAAATGTAT GACTTCTATC 1151 ATGAGTTGGG CATCGGTGTG CGTATGCACT
CGGGCTTTCC GGGCGAAACT 1201 GCAGGTTTGT TGAGAAATTG GCGCAGGTGG
CGGCCTATCG AACAGGCGAC 1251 GATGTCTTTC GGTTACGGCC TGCAATTGAG
CCTGCTGCAA TTGGCGCGCG 1301 CCTATACCGC ACTGACGCAC GACGGCGTTT
TACTGCCGGT CAGCTTTGAA 1351 AAACAGGCGG TTGCGCCGCA AGGCAAACGC
ATATTCAAAG AATCGACCGC 1401 GCGCGAGGTA CGCAATCTGA TGGTTTCCGT
AACCGAGCCG GGCGGCACCG 1451 GTACGGCGGG TGCGGTGGAC GGTTTCGATG
TCGGCGCGAA AACCGGCACG 1501 GCGCGCAAGT TCGTCAACGG GCGTTATGCC
GACAACAAAC ACATCGCTAC 1551 CTTTATCGGT TTTGCCCCCG CCAAAAATCC
CCGTGTGATT GTGGCGGTAA 1601 CCATTGACGA ACCGACTGCC CACGGTTATT
ACGGCGGCGT AGTGGCAGGG 1651 CCGCCCTTCA AAAAAATTAT GGGCGGCAGC
CTGAACATCT TGGGCATTTC 1701 CCCGACCAAG CCACTGACCG CCGCAGCCGT
CAAAACACCG TCTTAA
This corresponds to the amino acid sequence <SEQ ID 2692; ORF
793.a>:
TABLE-US-03167 a793.pep 1 MLIKSEYKPR MLPKEEQVKK PMTSNGRISF
VLMAIAVLFA GLIARGLYLQ 51 TVTYNFLKEQ GDNRIVRTQT LPATRGTVSD
RNGAVLALSA PTESLFAVPK 101 EMKEMPSAAQ LERLSELVDV PVDVLRNKLE
QKGKSFIWIK RQLDPKVAEE 151 VKALGLENFV FEKELKRHYP MGNLFAHVIG
FTDIDGKGQE GLELSLEDSL 201 HGEDGAEVVL RDRQGNIVDS LDSPRNKAPK
NGKDIILSLD QRIQTLAYEE 251 LNKAVEYHQA KAGTVVVLDA RTGEILALAN
TPAYDPNRPG RADSEQRRNR 301 AVTDMIEPGS AIKPFVIAKA LDAGKTDLNE
RLNTQPYKIG PSPVRDTHVY 351 PSLDVRGIMQ KSSNVGTSKL SARFGAEEMY
DFYHELGIGV RMHSGFPGET 401 AGLLRNWRRW RPIEQATMSF GYGLQLSLLQ
LARAYTALTH DGVLLPVSFE 451 KQAVAPQGKR IFKESTAREV RNLMVSVTEP
GGTGTAGAVD GFDVGAKTGT 501 ARKFVNGRYA DNKHIATFIG FAPAKNPRVI
VAVTIDEPTA HGYYGGVVAG 551 PPFKKIMGGS LNILGISPTK PLTAAAVKTP S*
a793/m793 100.0% identity in 581 aa overlap 10 20 30 40 50 60
a793.pep
MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIARGLYLQTVTYNFLKEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIARGLYLQTVTYNFLKEQ 10 20
30 40 50 60 70 80 90 100 110 120 a793.pep
GDNRIVRTQLLPATRGTVSDRNGAVLALSAPTESLFAVPKEMKEMPSAAQLERLSELVDV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
GDNRIVRTQLLPATRGTVSDRNGAVLALSAPTESLFAVPKEMKEMPSAAQLERLSELVDV 70 80
90 100 110 120 130 140 150 160 170 180 a793.pep
PVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFVFEKELKRHYPMGNLFAHVIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
PVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFVFEKELKRHYPMGNLFAHVIG 130
140 150 160 170 180 190 200 210 220 230 240 a793.pep
FTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIVDSLDSPRNKAPKNGKDIILSLD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
FTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIVDSLDSPRNKAPKNGKDIILSLD 190
200 210 220 230 240 250 260 270 280 290 300 a793.pep
QRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEILALANTPAYDPNRPGRADSEQRRNR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
QRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEILALANTPAYDPNRPGRADSEQRRNR 250
260 270 280 290 300 310 320 330 340 350 360 a793.pep
AVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPSPVRDTHVYPSLDVRGIMQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
AVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKIGPSPVRDTHVYPSLDVRGIMQ 310
320 330 340 350 360 370 380 390 400 410 420 a793.pep
KSSNVGTSKLSARFGAEEMYDFYHELGIGVRMHSGFPGETAGLLRNWRRWRPIEQATMSF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
KSSNVGTSKLSARFGAEEMYDFYHELGIGVRMHSGFPGETAGLLRNWRRWRPIEQATMSF 370
380 390 400 410 420 430 440 450 460 470 480 a793.pep
GYGLQLSLLQLARAYTALTHDGVLLPVSFEKQAVAPQGKRIFKESTAREVRNLMVSVTEP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
GYGLQLSLLQLARAYTALTHDGVLLPVSFEKQAVAPQGKRIFKESTAREVRNLMVSVTEP 430
440 450 460 470 480 490 500 510 520 530 540 a793.pep
GGTGTAGAVDGFDVGAKTGTARKFVNGRYADNKHIATFIGFAPAKNPRVIVAVTIDEPTA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m793
GGTGTAGAVDGFDVGAKTGTARKFVNGRYADNKHIATFIGFAPAKNPRVIVAVTIDEPTA 490
500 510 520 530 540 550 560 570 580 a793.pep
HGYYGGVVAGPPFKKIMGGSLNILGISPTKPLTAAAVKTPSX
|||||||||||||||||||||||||||||||||||||||||| m793
HGYYGGVVAGPPFKKIMGGSLNILGISPTKPLTAAAVKTPSX 550 560 570 580
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2693>:
TABLE-US-03168 g794.seq 1 gtgcgtttca ATCATTTCAT AATGGTAACG
ATTATTATAT ATGTGATTTC 51 CCCTGCAAAC AAGCCGGTCC GCCGCCCCGG
CGTTCCCACT TATCCGGCTT 101 TGCCTTATAA TTGCTTTTTT TATGTAACAG
ATTCACCTAT GAATTTCCCC 151 AAAACAGCGG CCTCCCTGCT GCTGCTTCTC
GCCTCCCTCG CCGCACACGC 201 GCTCGATACC GGCCGCATTC CGCAAAACGA
AATCGCTGTA TATGTCCAAG 251 AGCTTGACAG CGGAAAAGTC ATCATTGACC
ACCGTGCCGG CATACCCGTC 301 AATCCCGCGT CCACGATGAA GCTCGTTACC
GCGTTTGCCG CCTTCAAAAC 351 CTTCGGCAGC AATTACCGCT GGGCGACCGA
GTTTAAAAGC AACGGTACGG 401 TAAACGACGG CACGCTTGAC GGAAACCTGT
ATTGGGCGGG CAGCGGCGAC 451 CCCGTTTTCA ATCAGGAAAA CCTGCTTGCC
GTCCAACGCC AGTTGCGCGA 501 CAAAGGCATC CGCAATATCA CGGGGCGCCT
GATGCTCGAC CACAGCCTGT 551 GGGGCGAAGT CGGCAGTCCC GACCATTTTG
AAGCCGACAG CGGTTCGCCG 601 TTTATGACGC CCCCAAATCC GACTATGCTG
TCTGCCGGTA TGGTTATGGT 651 GCGCGCCGAA CGCAATGCCG CCGGCAGTAC
CGACATCCTC ACCGATCCGC 701 CTTTGCCGCA TATTTTTGCC CAAAACAACT
TGAAAATTAC CGCCTCCCAA 751 GCTGCCTGCC CTTCGGTCAA AAAACTGATG
CGCGCATCTT TTTCGGGCAA 801 TACGCTGAAA TTGCGCGGCA ATATTCCCGA
AAGCTGTTTG GGCAAGCCTG 851 TCGGTGTCCG GATGTTCGCG CTTGACGAAC
TGATCCGCCA AAGTTTTACC 901 AACCGCTGGC TGCTCGGCGG CGGACGGATT
TCAGACGGCA TCGGCATAGC 951 CGACACACCG GAAGGCGCGC AGACGCTTGC
CGTTGCACAC TCCAAACCGA 1001 TGAAGGAAAT TTTGACGGAC ATGAACAAGC
GTTCGGACAA TCTGATTGCG 1051 CGTTCCGTCT TCCTCAAACT CGGCGGCGAC
GGCAAACTGC CCGCCGTTTC 1101 CGAACAGGCG GCGTCTGCCG TCCGGCGAGA
ACTTGCCGTA TCGGGCATCG 1151 ATGTTGCGGA TTTGGTTTTG GAAAACGGTT
CGGGTCTGTC CAGAAAAGAA 1201 AGGGTAACGG CGAGAATGAT GGCGCAAATG
TTGGAAACGG CTTATTTCAG 1251 CCCGTTTGCA CAAGATTTCA TCGACACGCT
GCCCATCGCC GGCACAGACG 1301 GGACTTTACG CAACCGCTTC AAACAAAGCG
GCGGGCTGTT GCGCTTAAAA 1351 ACCGGCACGC TCAACAATGT CCGCGCCCTT
GCAGGTTATT GGCTGGGCGA 1401 CAAACCGATG GCGGTGGTCG TCATCATCAA
CAGCGGCCGC GCCGTTTCCC 1451 TGCTGCCCGA CTTGGACAAC TTCGTTGCCA
AAAACATCAT CTCCGGCGGC 1501 GACGGCTGGC TGGATGCGAA ACTGATGTGC
AAAGAACGCC GCGCCTGA
This corresponds to the amino acid sequence <SEQ ID 2694; ORF
794.ng>:
TABLE-US-03169 g794.pep 1 VRFNHFIMVT IIIYVISPAN KPVRRPGVPT
YPALPYNCFF YVTDSPMNFP 51 KTAASLLLLL ASLAAHALDT GRIPQNEIAV
YVQELDSGKV IIDHRAGIPV 101 NPASTMKLVT AFAAFKTFGS NYRWATEFKS
NGTVNDGTLD GNLYWAGSGD 151 PVFNQENLLA VQRQLRDKGI RNITGRLMLD
HSLWGEVGSP DHFEADSGSP 201 FMTPPNPTML SAGMVMVRAE RNAAGSTDIL
TDPPLPHIFA QNNLKITASQ 251 AACPSVKKLM RASFSGNTLK LRGNIPESCL
GKPVGVRMFA LDELIRQSFT 301 NRWLLGGGRI SDGIGIADTP EGAQTLAVAH
SKPMKEILTD MNKRSDNLIA 351 RSVFLKLGGD GKLPAVSEQA ASAVRRELAV
SGIDVADLVL ENGSGLSRKE 401 RVTARMMAQM LETAYFSPFA QDFIDTLPIA
GTDGTLRNRF KQSGGLLRLK 451 TGTLNNVRAL AGYWLGDKPM AVVVIINSGR
AVSLLPDLDN FVAKNIISGG 501 DGWLDAKLMC KERRA*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2695>:
TABLE-US-03170 m794.seq 1 GTGCGTCTCA ATCATTTCAT AATGATAGCG
ATTATTATAT ATGTGATTTC 51 CCCTGCAAAC AAGCCGGCCC GCCGCCACAG
CGTTCCCACT TATCCGGCTT 101 TGCCTTATAA TTGCTTTTTT TATGTAACAG
ATTTACCTAT GAATTTCCCC 151 AAAACAGCGG CCTCCCTGCT GCTGCTTCTC
GCCTCCCTCG CCGCACACGC 201 GCTCGATACC GGCCGCATTC CGCAAAACGA
AATCGCCGTA TATGTCCAAG 251 AGCTTGACAG CGGAAAAGTC ATCATTGACC
ACCGCTCGGA TGTCCCCGTC 301 AACCCCGCCT CCACAATGAA ACTCGTTACC
GCGTTTGCCG CCTTCAAAAC 351 CTTCGGCAGC AATTACCGCT GGGCGACCGA
GTTTAAAAGC AACGGTACGG 401 TAAACGACGG CACGCTTGAC GGAAACCTAT
ATTGGGCGGG CAGCGGCGAC 451 CCCGTTTTCA ATCAGGAAAA CCTGCTTGAT
GCTCAAAAAC AGTTGCGCGA 501 ACAAGGCATA CTCAATATCA CGGGACACCT
GATGCTCGAC CACAGCCTGT 551 GGGGCGAAGT CGGCAGCCCC GACGATTTCG
AAGCCGACAG CGGTTCGCCG 601 TTTATGACGC CCCCCAATCC AACTATGCTG
TCTGCCGGTA TGGTTATGGT 651 GCGCGCCGAA CGCAATGCCG CCGGCAGTAC
CGACATCCTC ACCGATCCGC 701 CTTTGCCGCA TATTTTCGCC CAAAACAACT
TGAAAATTAC CGCCTCCCAA 751 GCTGCCTGCC CTTCGATCAA AAAACTGATG
CGTGCATCTT TTTCGGACAA 801 TACGCTGAAA TTGCGCGGCA ATATTCCCGA
GAGCTGTTTG GGCAAGCCTG 851 TCGGTGTCCG GATGTTCGCG CTTGACGAAC
TGATCCGGCA AAGTTTTACC 901 AACCACTGGC TGCTCGGCGG CGGACGGATT
TCAGACGGTA TCGGCATAGC 951 CGACACGCCG GAAGGCGCGC AGACACTTGC
CGTTGCACAC GCCAAACCGA 1001 TGAAAGAAAT TTTGACGGAC ATGAACAAGC
GTTCGGACAA TCTAATTGCG 1051 CGTTCCGTCT TCCTCAAACT CGGCGGCGAC
GGCAAACTGC CCGCCGTTTC 1101 CGAACAGGCG GCGTCTGCCG TCCGGCGCGA
ACTTGCCGTA TCGGGCATCG 1151 ATGTTGCGGA TTTGGTTTTG GAAAACGGTT
CGGGCCTGTC CAGAAAAGAA 1201 AGGGTAACGG CGAGAATGAT GGCGCAAATG
TTGGAAACGG CTTATTTCAG 1251 CCCGTTTGCA CAAGATTTCA TCGACACGCT
ACCCATCGCC GGCACAGACG 1301 GAACTTTACG CAACCGCTTC AAACAAAGCG
GCGGGCTGTT GCGCTTAAAA 1351 ACCGGCACGC TCAACAATGT CCGCGCCCTT
GCAGGTTATT GGCTGGGCGA 1401 CAAACCGATG GCGGTGGTCG TCATCATCAA
CAGCGGCCGC GCCGTTTCCC 1451 TGCTGCCAGA CTTGGACAAC TTCGTTGCCA
ACAACATCAT CTCCGGCGGC 1501 GATGGCTGGC TGGATGCGAA ACTGATGTGC
AAAGAACGCC GAGCCTGA
This corresponds to the amino acid sequence <SEQ ID 2696; ORF
794>:
TABLE-US-03171 m794.pep 1 VRLNHFIMIA IIIYVISPAN KPARRHSVPT
YPALPYNCFF YVTDLPMNFP 51 KTAASLLLLL ASLAAHALDT GRIPQNEIAV
YVQELDSGKV IIDHRSDVPV 101 NPASTMKLVT AFAAFKTFGS NYRWATEFKS
NGTVNDGTLD GNLYWAGSGD 151 PVFNQENLLD AQKQLREQGI LNITGHLMLD
HSLWGEVGSP DDFEADSGSP 201 FMTPPNPTML SAGMVMVRAE RNAAGSTDIL
TDPPLPHIFA QNNLKITASQ 251 AACPSIKKLM RASFSDNTLK LRGNIPESCL
GKPVGVRMFA LDELIRQSFT 301 NHWLLGGGRI SDGIGIADTP EGAQTLAVAH
AKPMKEILTD MNKRSDNLIA 351 RSVFLKLGGD GKLPAVSEQA ASAVRRELAV
SGIDVADLVL ENGSGLSRKE 401 RVTARMMAQM LETAYFSPFA QDFIDTLPIA
GTDGTLRNRF KQSGGLLRLK 451 TGTLNNVRAL AGYWLGDKPM AVVVIINSGR
AVSLLPDLDN FVANNIISGG 501 DGWLDAKLMC KERRA* g794/m794 95.5%
identity in 515 aa overlap 10 20 30 40 50 60 g794.pep
VRFNHFIMVTIIIYVISPANKPVRRPGVPTYPALPYNCFFYVTDSPMNFPKTAASLLLLL
||:|||||::||||||||||||:|| :||||||||||||||||| ||||||||||||||| m794
VRLNHFIMIAIIIYVISPANKPARRHSVPTYPALPYNCFFYVTDLPMNFPKTAASLLLLL 10 20
30 40 50 60 70 80 90 100 110 120 g794.pep
ASLAAHALDTGRIPQNEIAVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFKLFGS
|||||||||||||||||||||||||||||||||||: :|||||||||||||||||||||| m794
ASLAAHALDTGRIPQNEIAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKLFGS 70 80
90 100 110 120 130 140 150 160 170 180 g794.pep
NYRWATEFKSNGTVNDGTLDGNLYWAGSGDPVFNQENLLAVQRQLRDKGIRNITGRLMLD
||||||||||||||||||||||||||||||||||||||| :|:|||::|| ||||:|||| m794
NYRWATEFKSNGTVNDGTLDGNLYWAGSGDPVFNQENLLDAQKQLREQGILNITGHLMLD 130
140 150 160 170 180 190 200 210 220 230 240 g794.pep
HSLWGEVGSPDHFEADSGSPFMTPPNPTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFA
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| m794
HSLWGEVGSPDDFEADSGSPFMTPPNPTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFA 190
200 210 220 230 240 250 260 270 280 290 300 g794.pep
QNNLKITASQAACPSVKKLMRASFSGNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFT
|||||||||||||||:||||||||| |||||||||||||||||||||||||||||||||| m794
QNNLKITASQAACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFT 250
260 270 280 290 300 310 320 330 340 350 360 g794.pep
NRWLLGGGRISDGIGIADTPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGD
|:||||||||||||||||||||||||||||:||||||||||||||||||||||||||||| m794
NHWLLGGGRISDGIGIADTPEGAQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGD 250
260 270 280 290 300 370 380 390 400 410 420 g794.pep
GKLPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFA
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| m794
GKLPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFA 370
380 390 400 410 420 430 440 450 460 470 480 g794.pep
QDFIDTLPIAGTDGTLRNRFKQSGGLLRLKTGLLNNVRALAGYWLGDKPMAVVVIINSGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
QDFIDTLPIAGTDGTLRNRFKQSGGLLRLKTGLLNNVRALAGYWLGDKPMAVVVIINSGR 430
440 450 460 470 480 490 500 510 g794.pep
AVSLLPDLDNFVAKNIISGGDGWLDAKLMCKERRAX
|||||||||||||:|||||||||||||||||||||| m794
AVSLLPDLDNFVANNIISGGDGWLDAKLMCKERRAX 490 500 510
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2697>:
TABLE-US-03172 a794.seq 1 GTGCGTCTCA ATCATTTCAT AATGATAGCG
ATTATTATAT ATGTGATTTC 51 CCCTGCAAAC AAGCCGGCCC GCCGCCACAG
CGTTCCCACT TATCCGGCTT 101 TGCCTTATAA TTGCTTTTTT TATGTAACAG
ATTTACCTAT GAATTTCCCC 151 AAAACAGCGG CCTCCCTGCT GCTGCTTCTC
GCCTCCCTCG CCGCACACGC 201 GCTCGATACA GGTCGCATTC CGCAAAACGA
AATCGCCGTA TATGTCCAAG 251 AGCTTGACAG CGGAAAAGTC ATCATTGACC
ACCGCTCGGA TGTCCCCGTC 301 AACCCCGCCT CCACAATGAA ACTCGTTACC
GCGTTTGCCG CCTTCAAAAC 351 CTTCGGCAGC AATTACCGCT GGGCGACCGA
GTTTAAAAGC AACGGTACGG 401 TAAACGACGG CACGCTTGAC GGAAACCTGT
ATTGGGCGGG CAGCGGCGAC 451 CCCGTTTTCA ATCAGGAAAA CCTGCTTGCC
GTCCAACGCC AGTTGCGCGA 501 ACAAGGCATA CGCAATATCA CGGGACACCT
GATGCTCGAC CACAGCCTGT 551 GGGGCGAAGT CGGCAGCCCC GACGATTTCG
AAGCCGACAG CGGTTCGCCG 601 TTTATGACGC CCCCCAATCC AACTATGCTG
TCTGCCGGTA TGGTTATGGT 651 GCGCGCCGAA CGCAATGCCG CCGACAGTAC
CGACATCCTC ACCGATCCGC 701 CTTTGCCGCA TATTTTCGCC CAAAACAACT
TGAAAATTAC CGCCTCCCAA 751 GCTGCCTGCC CTTCGATCAA AAAACTGATG
CGTGCATCTT TTTCGGACAA 801 TACGCTGAAA TTGCGCGGCA ATATTCCCGA
GAGCTGTTTG GGCAAGCCTG 851 TCGGTGTCCG GATGTTCGCG CTTGACGAAC
TGATCCGGCA AAGTTTTACC 901 AACCACTGGC TGCTCGGCGG CGGACGGATT
TCAGACGGCA TCGGCATATC 951 CGACACGCCG GAAGGCGCGC AGACGCTTGC
CGTTGCACAC TCAAAGCCGA 1001 TGAAGGAAAT TTTGACGGAC ATGAACAAGC
GTTCGGACAA TCTAATTGCG 1051 CGTTCCGTCT TCCTCAAACT CGGCGGCGAC
GGCAAACTGC CCGCCGTTTC 1101 CGAACAGGCA GCGTCTGCCG TCCGGCGTGA
ACTTGCCGTG TCGGGCATCG 1151 ATGTTGCGGA TTTGGTTTTG GAAAACGGTT
CAGGTCTGTC CAGAAAAGAA 1201 AGGGTAACGG CGAGAATGAT GGCGCAAATG
TTGGAAACGG CTTATTTCAG 1251 CCCGTTTGCA CAAGATTTCA TCGATACGCT
GCCCATCGCC GGCACAGACG 1301 GGACTTTACG CAACCGCTTC AAACAAAGCG
GCGGGCTGTT GCGCTTAAAA 1351 ACCGGCACGC TCAACAATGT CCGCGCCCTT
GCAGGTTATT GGCTGGGCGA 1401 CAAACCGATG GCGGTGGTCG TCATCATCAA
CAGCGGCCGC GCCGTTTCCC 1451 TGCTGCCCGA CTTGGACAAC TTCGTTGCCA
ACAACATCAT CTCCGGCGGC 1501 GATGGCTGGC TGGATGCGAA ACTGATGTGC
AAAGAACGCC GAGCCTGA
This corresponds to the amino acid sequence <SEQ ID 2698; ORF
794.a>:
TABLE-US-03173 a794.pep 1 VRLNHFIMIA IIIYVISPAN KPARRHSVPT
YPALPYNCFF YVTDLPMNFP 51 KTAASLLLLL ASLAAHALDT GRIPQNEIAV
YVQELDSGKV IIDHRSDVPV 101 NPASTMKLVT AFAAFKTFGS NYRWATEFKS
NGTVNDGTLD GNLYWAGSGD 151 PVFNQENLLA VQRQLREQGI RNITGHLMLD
HSLWGEVGSP DDFEADSGSP 201 FMTPPNPTML SAGMVMVRAE RNAADSTDIL
TDPPLPHIFA QNNLKITASQ 251 AACPSIKKLM RASFSDNTLK LRGNIPESCL
GKPVGVRMFA LDELIRQSFT 301 NHWLLGGGRI SDGIGISDTP EGAQTLAVAH
SKPMKEILTD MNKRSDNLIA 351 RSVFLKLGGD GKLPAVSEQA ASAVRRELAV
SGIDVADLVL ENGSGLSRKE 401 RVTARMMAQM LETAYFSPFA QDFIDTLPIA
GTDGTLRNRF KQSGGLLRLK 451 TGTLNNVRAL AGYWLGDKPM AVVVIINSGR
AVSLLPDLDN FVANNIISGG 501 DGWLDAKLMC KERRA* a794/m794 98.6%
identity in 515 aa overlap 10 20 30 40 50 60 a794.pep
VRLNHFIMIAIIIYVISPANKPARRHSVPTYPALPYNCFFYVTDLPMNFPKTAASLLLLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
VRLNHFIMIAIIIYVISPANKPARRHSVPTYPALPYNCFFYVTDLPMNFPKTAASLLLLL 10 20
30 40 50 60 70 80 90 100 110 120 a794.pep
ASLAAHALDTGRIPQNEIAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKLFGS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
ASLAAHALDTGRIPQNEIAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKLFGS 70 80
90 100 110 120 130 140 150 160 170 180 a794.pep
NYRWATEFKSNGTVNDGTLDGNLYWAGSGDPVFNQENLLAVQRQLREQGIRNITGHLMLD
||||||||||||||||||||||||||||||||||||||| :|:||||||| ||||||||| m794
NYRWATEFKSNGTVNDGTLDGNLYWAGSGDPVFNQENLLDAQKQLREQGILNITGHLMLD 130
140 150 160 170 180 190 200 210 220 230 240 a794.pep
HSLWGEVGSPDDFEADSGSPFMTPPNPTMLSAGMVMVRAERNAADSTDILTDPPLPHIFA
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| m794
HSLWGEVGSPDDFEADSGSPFMTPPNPTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFA 190
200 210 220 230 240 250 260 270 280 290 300 a794.pep
QNNLKITASQAACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
QNNLKITASQAACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFT 250
260 270 280 290 300 310 320 330 340 350 360 a794.pep
NHWLLGGGRISDGIGISDTPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGD
||||||||||||||||:|||||||||||||:||||||||||||||||||||||||||||| m794
NHWLLGGGRISDGIGIADTPEGAQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGD 310
320 330 340 350 360 370 380 390 400 410 420 a794.pep
GKLPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
GKLPAVSEQAASAVRRELAVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFA 370
380 390 400 410 420 430 440 450 460 470 480 a794.pep
QDFIDTLPIAGTDGTLRNRFKQSGGLLRLKTGLLNNVRALAGYWLGDKPMAVVVIINSGR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m794
QDFIDTLPIAGTDGTLRNRFKQSGGLLRLKTGLLNNVRALAGYWLGDKPMAVVVIINSGR 430
440 450 460 470 480 490 500 510 a794.pep
AVSLLPDLDNFVANNIISGGDGWLDAKLMCKERRAX
|||||||||||||||||||||||||||||||||||| m794
AVSLLPDLDNFVANNIISGGDGWLDAKLMCKERRAX 490 500 510
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2699>:
TABLE-US-03174 g900.seq 1 ATGccgTCTG AAATGCCGTC TGAAACGTGG
CAGGCGGAGG TTCGGACGGC 51 ATTGGGTTTA TTTCAACGGG CGGATGCCGA
CCGCATCGCG TACTTTATCC 101 AACAATTCGC GCGCTTCTTT GCGCGCTTTT
TGCGCGcctg cctGCAAAAT 151 CTCTTCGATT TGCGAAGGAT TAGAGGTCAA
TGCGTTGTAG CGTTCGCGCA 201 GTTCTGCCAA TTCGGCGTTG ATTTTCGCCG
CCGAAAGTTT TTTCGCCTCG 251 CCCCAAGCCA AGCCGTCGGC AAGCATTTGC
GTAAATTCCG CCGTTTCAGA 301 CGGCGTGGAG AAGGCTTTAT AGATTTCAAA
CAAAGGGCTT TCGTCGGGCT 351 GTTTCGGCTC GCCCGGCTCT TTCATGTTGG
TAATGATTTT GTTGACCGAT 401 TTTTGGGTTT TTTTGTCGTT TTCCCAAAGC
GGAATGGTAT TGCCGTAGGA 451 TTTGGACATT TTGCGTCCGT CCAAACCGAC
CAAGAGTTCG ACGTTTTCGT 501 CGATTTTCAC TTCGGGCagg GTGaagagtt
cTTGGAaacc gtgggtgaag 551 cggccggcAa tgtcgcgcgc cATTTcgacg
tgttgGATTT GGTCGCGCCC 601 GACGGGGACT TCGTTGGCGT TGAACATCAA
AATGTCGGCA GTCATCAGAA 651 TCGGATAACT GAACAAACCC ATTTCCACAC
CGAAATCGGG GTCTTCCTGC 701 CCGTTTTCCG CATTGGCTTG AACGGCGGCT
TTGTAGGCGT GGGCGCGGTT 751 CATCAAACCC TTGGCGGTGA TGCAGGTCAG
AATCCAGTTC AACTCCATCA 801 CTTCGGGAAT GTCGCTTTGG CGGTAGAAGG
TGGTGCGCTC GGGGTCGAGT 851 CCGCAGGCAA GCCAAGTGGC GGCAACGGCt
tgGGTGGATT GGTGAATCAT 901 CTCCTGCTCG TGGCATTTGA TGATGCCGTG
GTAATCGGCG AGGAAGAGGA 951 AGGATTCGGT ATCGGGGTTT TGCGCCGCGC
GGACGGCGGG GCGGATGGCG 1001 CCGACGTAGT TGCCCAGATG CGGGGTGCCG
GTGGTGGTTA CGCCGGTCAG 1051 AACTCGTTTT TTGCTCATAA AAATGTCCTT
ACGGCAGCAA TGCCGTCTGA 1101 AAGGGAAAa. gatgcgCCGA TTATACCCGA
TTTGCCACAT ACATCCAGCC 1151 GacaACagaC TTTTCCATAT TAA
This corresponds to the amino acid sequence <SEQ ID 2700; ORF
900.ng:
TABLE-US-03175 g900.pep 1 MPSEMPSETW QAEVRTALGL FQRADADRIA
YFIQQFARFF ARFLRACLQN 51 LFDLRRIRGQ CVVAFAQFCQ FGVDFRRRKF
FRLAPSQAVG KHLRKFRRFR 101 RRGEGFIDFK QRAFVGLFRL ARLFHVGNDF
VDRFLGFFVV FPKRNGIAVG 151 FGHFASVQTD QEFDVFVDFH FGQGEEFLET
VGEAAGNVAR HFDVLDLVAP 201 DGDFVGVEHQ NVGSHQNRIT EQTHFHTEIG
VFLPVFRIGL NGGFVGVGAV 251 HQTLGGDAGQ NPVQLHHFGN VALAVEGGAL
GVESAGKPSG GNGLGGLVNH 301 LLLVAFDDAV VIGEEEEGFG IGVLRRADGG
ADGADVVAQM RGAGGGYAGQ 351 NSFFAHKNVL TAAMPSEREK DAPIIPDLPH
TSSRQQTFPY *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2701>:
TABLE-US-03176 m900.seq 1 ATGCCGTCTG AAACGCGGCA GGCGGAGGTT
CGGACGGCAT CGGGTTCATT 51 TCAACGGGCG GATGcCGACC GCATCgG.TA
CTTTGTCCAA TAATTCGCGT 101 GCTTCTTTAC GCGCTTTCGC CGCGCCTGCC
TGCAAAATCT CTTCGATTTG 151 CGAAGGGTCG GCGGTCAGCT CGTTGTAGCG
TTCGCGCGGT TCGGCGAGTT 201 CGGCGTTGAT TTTCGCCGCC AAAAGTTTTT
TGGCTTCACC CCACGCCAAG 251 CCGTCGGCAA GCATTTTCGT AAATTCCACC
GTTTCAGACG GCGTGGAGAA 301 GGCTTTGTAG ATTTCAAACA ATGGGCTTTC
GTCGGGCTGT TTCGGCTCGC 351 CCGGCTCTTT CATATTGGTG ATGATTTTGT
TGACCGATTT TTGGGTTTTT 401 tTGTCGTTTT CCCAAAGCGG AATGGTGTTG
CCGTAGGATT TGGACATTTT 451 GCGTCCGTCC AAACCGACCA AGAGTTCGAC
GTTTTCATCG ATTTTCACTT 501 CGGGCAGGGT GAAGAGTTCC CGGAAGCGGT
GGTTGAAGCG GCCGGCGATG 551 TCGCGCGCCA TTTCGACGTG TTGGATTTGG
TCGCGCCCGA CgGGCaCTTC 601 GTTGGCGTTG AACATCAGAA TATCGGCAGT
CATCAGAATC GGATAACTGA 651 ACAAACCCAT TTCCACACCG AAATCAGGGT
CTTCCTGCCC GTTTTCTGCA 701 TTTGCCTGCA CGGCGGCTTT GTAGGCATGG
GCGCGGTTCA TCAAACCCTT 751 GGCAGTGATG CAGGTCAGAA TCCAGTTCAA
TTCCATCACT TCgGGAGTGT 801 CGCTTTGGCG GTAGAAGGTG GTGCGCTCGG
GGTCGAGTCC GCAgGCAAGC 851 CAAGTGGCGG CAACGGCTTG GGTGGATTGG
TGAATCATCT CCGGCTCGTG 901 GCATTTGATG ATACCGTGGT AATCGGCGAG
GAAGAGGAAG GATTCGGTAT 951 CGAGGTTTTG CGCCGCGCGG ACGGCGGGGC
GGATGGCGCC GACGTAGTTG 1001 CCCAGATGCG GGATGCCGGT GGTGGTTACG
CCGGTCAGAA CTCGTTTTTT 1051 GCTCATAAAA ATGTCCTTGC GGCATCAATG
CCGTCTGAAA GGGAAAAAGA 1101 TGTGCCGATT ATACCCGATT TGCCACCTAC
ATCCAGCCGA CAACAGACTT 1151 TTCCATATTA A
This corresponds to the amino acid sequence <SEQ ID 2702; ORF
900>:
TABLE-US-03177 m900.pep 1 MPSETRQAEV RTASGSFQRA DADRIXYFVQ
*FACFFTRFR RACLQNLFDL 51 RRVGGQLVVA FARFGEFGVD FRRQKFFGFT
PRQAVGKHFR KFHRFRRRGE 101 GFVDFKQWAF VGLFRLARLF HIGDDFVDRF
LGFFVVFPKR NGVAVGFGHF 151 ASVQTDQEFD VFIDFHFGQG EEFPEAVVEA
AGDVARHFDV LDLVAPDGHF 201 VGVEHQNIGS HQNRITEQTH FHTEIRVFLP
VFCICLHGGF VGMGAVHQTL 251 GSDAGQNPVQ FHHFGSVALA VEGGALGVES
AGKPSGGNGL GGLVNHLRLV 301 AFDDTVVIGE EEEGFGIEVL RRADGGADGA
DVVAQMRDAG GGYAGQNSFF 351 AHKNVLAASM PSEREKDVPI IPDLPPTSSR
QQTFPY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 900
shows 87.0% identity over a 386 aa overlap with a predicted ORF
(ORF 900.ng) from N. gonorrhoeae:
TABLE-US-03178 m900/g900 10 20 30 40 50 m900.pep
MPSETRQAEVRTASGSFQRADADRIGYFVQXFACFFTRFRRACLQNLFDLRRVGGQ |||||
||||||| | |||||||||:||:| || ||:|| |||||||||||: || g900
MPSEMPSETWQAEVRTALGLFQRADADRIAYFIQQFARFFARFLRACLQNLFDLRRIRGQ 10 20
30 40 50 60 60 70 80 90 100 110 m900.pep
LVVAFARFGEFGVDFRRQKFFGFTPRQAVGKHFRKFHRFRRRGEGFVDFKQWAFVGLFRL
|||||:| :|||||||:||| ::| ||||||:|||:|||||||||:|||| |||||||| g900
CVVAFAQFCQFGVDFRRRKFFRLAPSQAVGKHLRKFRRFRRRGEGFIDFKQRAFVGLFRL 70 80
90 100 110 120 120 130 140 150 160 170 m900.pep
ARLFHIGDDFVDRFLGFFVVFPKRNGVAVGFGHFASVQTDQEFDVFIDFHFGQGEEFPEA
|||||:|:||||||||||||||||||:|||||||||||||||||||:|||||||||| |: g900
ARLFHVGNDFVDRFLGFFVVFPKRNGIAVGFGHFASVQTDQEFDVFVDFHFGQGEEFLET 130
140 150 160 170 180 180 190 200 210 220 230 m900.pep
VVEAAGDVARHFDVLDLVAPDGHFVGVEHQNIGSHQNRITEQTHFHTEIRVFLPVFCICL |
||||:||||||||||||||| ||||||||:||||||||||||||||| |||||| | | g900
VGEAAGNVARHFDVLDLVAPDGDFVGVEHQNVGSHQNRITEQTHFHTEIGVFLPVFRIGL 190
200 210 220 230 240 240 250 260 270 280 290 m900.pep
HGGFVGMGAVHQTLGSDAGQNPVQFHHFGSVALAVEGGALGVESAGKPSGGNGLGGLVNH
:|||||:||||||||:||||||||:||||:|||||||||||||||||||||||||||||| g900
NGGFVGVGAVHQTLGGDAGQNPVQLHHFGNVALAVEGGALGVESAGKPSGGNGLGGLVNH 250
260 270 280 290 300 300 310 320 330 340 350 m900.pep
LRLVAFDDTVVIGEEEEGFGIEVLRRADGGADGADVVAQMRDAGGGYAGQNSFFAHKNVL |
||||||:|||||||||||| ||||||||||||||||||| |||||||||||||||||| g900
LLLVAFDDAVVIGEEEEGFGIGVLRRADGGADGADVVAQMRGAGGGYAGQNSFFAHKNVL 310
320 330 340 350 360 360 370 380 m900.pep
AASMPSEREKDVPIIPDLPPTSSRQQTFPYX :|:||||||||:||||||| |||||||||||
g900 TAAMPSEREKDAPIIPDLPHTSSRQQTFPYX 370 380 390
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2703>:
TABLE-US-03179 a900.seq (partial) 1 GAGGTTCGGA CGGCATTGGG
TTTATTTCAA CGGGCGGATA CCGACCGCAT 51 CACGTACTTT GCCCAATAAT
TCGCGTGCTT CTTTACGCGC TTTTTGCGCG 101 CCTGCCTGCA AAATCTCTTC
GATTTGCGAA GGGTCGGCGG TCAGCTCGTT 151 GTAGCGTTCG CGCGGTTCGG
CGAGTTCGGC GTTGATTTTC GCCGCCAAAA 201 GTTTTTTTGC CTCGCCCCAA
GCCAAGCCGT CGGCAAGCAT TTTCGTAAAT 251 TCTGCCGTTT CAGACGGCGT
GGAGAAAGCT TTGTAGATTT CAAACAGAGG 301 GCTTTCGTCG GGCTTCTTCG
GCTCGCCCGG CTCTTTCATA TTGGTGATGA 351 TTTTGTTGAC CGATTTTTGG
GTTTTTTTGT CGTTTTCCCA AAGCGGAATG 401 GTGTTGCCGT AGGATTTGGA
CATTTTGCGT CCGTCCAAAC CAACCAAGAG 451 TTCGACGTTT TCGTCGATTT
TCACTTCGGG CAGTGTGAAG AGTTCCCGGA 501 AGCGGTGGTT GAAGCGGCCG
GCAATATCGC GTGCCATTTC AACGTGTTGG 551 ATTTGGTCGC GACCGACTGG
AACTTCATGG GCATTGAACA TGAGAATGTC 601 GGCAGTCATG AGGATAGGGT
AGCTGTACAA ACCCATTTCC ACGCCGAAAT 651 CGGGGTCTTC CTGCCCGTTT
TCCGCATTTG CCTGCACGGC GGCTTTGTAG 701 GCGTGGGCGC GGTTCATCAA
ACCCTTGGCG GTGATGCAGG TCAGAATCCA 751 GTTCAATTCC ATCACTTCGG
GAATGTCGCT TTGACGGTAG AAGGTGGTGC 801 GCTCGGGGTC GAGTCCGCAG
GCAAGCCAAG TGGCGGCAAC GGCTTGGGTG 851 GATTGGTGAA TCATCTCCGG
CTCGTGGCAT TTGATGATAC CGTGGTAATC 901 GGCGAGGAAG AGGAAGGATT
CGGTATCAGG GTTTTGCGCC GCGCGGACGG 951 CGGGGCGGAT AGCACCGACG
TAGTTGCCCA GATGCGGGAT GCCGGTGGTG 1001 GTTACGCCGG TCAGAACTCG
TTTTTTGCTC ATAAAAATGT CCTTGCGGCA 1051 TCAATGCCGT CTGAAAGGGA
AAAAGATGCG CCGATTATAC CCGATTTGCC 1101 ACCTACATCC AGCCGACAAC
AGACTTTTCC ATATTAA
This corresponds to the amino acid sequence <SEQ ID 2704; ORF
900.a>:
TABLE-US-03180 a900.pep (partial) 1 EVRTALGLFQ RADTDRITYF
AQ*FACFFTR FLRACLQNLF DLRRVGGQLV 51 VAFARFGEFG VDFRRQKFFC
LAPSQAVGKH FRKFCRFRRR GESFVDFKQR 101 AFVGLLRLAR LFHIGDDFVD
RFLGFFVVFP KRNGVAVGFG HFASVQTNQE 151 FDVFVDFHFG QCEEFPEAVV
EAAGNIACHF NVLDLVATDW NFMGIEHENV 201 GSHEDRVAVQ THFHAEIGVF
LPVFRICLHG GFVGVGAVHQ TLGGDAGQNP 251 VQFHHFGNVA LTVEGGALGV
ESAGKPSGGN GLGGLVNHLR LVAFDDTVVI 301 GEEEEGFGIR VLRRADGGAD
STDVVAQMRD AGGGYAGQNS FFAHKNVLAA 351 SMPSEREKDA PIIPDLPPTS
SRQQTFPY* m900/a900 88.4% identity in 378 aa overlap 10 20 30 40 50
60 m900.pep
MPSETRQAEVRTASGSFQRADADRIXYFVQXFACFFTRFRRACLQNLFDLRRVGGQLVVA |||||
| |||||:|||:||:|||||||||| |||||||||||||||||||| a900
EVRTALGLFQRADTDRITYFAQXFACFFTRFLRACLQNLFDLRRVGGQLVVA 10 20 30 40 50
70 80 90 100 110 120 m900.pep
FARFGEFGVDFRRQKFFGFTPRQAVGKHFRKFHRFRRRGEGFVDFKQWAFVGLFRLARLF
||||||||||||||||| ::| |||||||||| |||||||:|||||| |||||:|||||| a900
FARFGEFGVDFRRQKFFCLAPSQAVGKHFRKFCRFRRRGESFVDFKQRAFVGLLRLARLF 60 70
80 90 100 110 130 140 150 160 170 180 m900.pep
HIGDDFVDRFLGFFVVFPKRNGVAVGFGHFASVQTDQEFDVFIDFHFGQGEEFPEAVVEA
|||||||||||||||||||||||||||||||||||:||||||:|||||| |||||||||| a900
HIGDDFVDRFLGFFVVFPKRNGVAVGFGHFASVQTNQEFDVFVDFHFGQCEEFPEAVVEA 120
130 140 150 160 170 190 200 210 220 230 240 m900.pep
AGDVARHFDVLDLVAPDGHFVGVEHQNIGSHQNRITEQTHFHTEIRVFLPVFCICLHGGF ||::|
||:|||||| | :|:|:||:|:|||::|:: |||||:|| |||||| ||||||| a900
AGNIACHFNVLDLVATDWNFMGIEHENVGSHEDRVAVQTHFHAEIGVFLPVFRICLHGGF 180
190 200 210 220 230 250 260 270 280 290 300 m900.pep
VGMGAVHQTLGSDAGQNPVQFHHFGSVALAVEGGALGVESAGKPSGGNGLGGLVNHLRLV
||:||||||||:|||||||||||||:|||:|||||||||||||||||||||||||||||| a900
VGVGAVHQTLGGDAGQNPVQFHHFGNVALTVEGGALGVESAGKPSGGNGLGGLVNHLRLV 240
250 260 270 280 290 310 320 330 340 350 360 m900.pep
AFDDTVVIGEEEEGFGIEVLRRADGGADGADVVAQMRDAGGGYAGQNSFFAHKNVLAASM
|||||||||||||||||:||||||||||::|||||||||||||||||||||||||||||| a900
AFDDTVVIGEEEEGFGIRVLRRADGGADSTDVVAQMRDAGGGYAGQNSFFAHKNVLAASM 300
310 320 330 340 350 370 380 m900.pep PSEREKDVPIIPDLPPTSSRQQTFPYX
|||||||:||||||||||||||||||| a900 PSEREKDAPIIPDLPPTSSRQQTFPYX 360
370
[0430] g901.seq not found yet
[0431] g901.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2705>:
TABLE-US-03181 m901.seq 1 ATGCCCGATT TTTCGATGTC CAATTTGGCC
GTTGCCTTTT CCATCACATT 51 GGCTGCCGGT TTGTTTACCG TATTAkGyAG
TGGCTTGGTG ATGTTTTCCA 101 AAACGCCCAA TCCGCGTGTG TTGTCGTTTG
GTTTGGCGTT TGCCGGCGGT 151 GCGATGGTAT ATGTTTCCCT GACGGAGATT
TTCAGTAAGT CCAGCGAGGC 201 GTTCGCTGAA ATTTATGATA AAGACCACGC
GTTTGCGGCG GCGACCATGG 251 CATTTTTGGC CGGGATGGGC GGCATTGCGC
TGATTGACCG TCTGGTGCCG 301 AACCCGCATG AAACTTTAGA CGCGCAAGAC
CCGTCGTTTC AAGAAAGCAA 351 ACGCCGCCAT ATCGCGCGAG TCGGCATGAT
GGCGGCGTTT GCGATTACTG 401 CGCACAATTT CCCCGAAGGC TTGGCGACGT
TTTTTGCCAC ATTGGAAAAT 451 CCAGCAGTCG GGATGCCTTT GGCCTTGGCG
ATTGCCATCC ATAATATTCC 501 GGAGGGCATT TCCATCGCCG CGCCGGTTTA
TTTTGCCACC CGCAGCCGTA 551 AGAAAACGGT GTGGGCGTGT CTGCTATCCG
GCTTGGCCGA GCCGTTGGGG 601 GCGGCTTTGG GCTATTTGGT TTTGCAGCCG
TTTTTGTCGC CTGCCGTGTT 651 TGGTTCGGTA TTCGGCGTGA TAGCCGGTGT
GATGGTGTTT TTGGCGTTGG 701 ACGAGCTGnt GCCGGCTGCC AAACGCTATT
CAGACGGCCA TGAAACCGTT 751 TACGGCCTGA CAACGGGTAT GGCGGTGATT
GCCGTCAGCC TGGTATTGTT 801 CCATTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2706; ORF
901>:
TABLE-US-03182 m901.pep 1 MPDFSMSNLA VAFSITLAAG LFTVLXSGLV
MFSKTPNPRV LSFGLAFAGG 51 AMVYVSLTEI FSKSSEAFAE IYDKDHAFAA
ATMAFLAGMG GIALIDRLVP 101 NPHETLDAQD PSFQESKRRH IARVGMMAAF
AITAHNFPEG LATFFATLEN 151 PAVGMPLALA IAIHNIPEGI SIAAPVYFAT
RSRKKTVWAC LLSGLAEPLG 201 AALGYLVLQP FLSPAVFGSV FGVIAGVMVF
LALDELXPAA KRYSDGHETV 251 YGLTTGMAVI AVSLVLFHF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2707>:
TABLE-US-03183 a901.seq 1 ATGCCCGATT TTTCGATGTC CAATTTGGCC
GTTGCCTTTT CCATTACGTT 51 GGCTGCCGGT TTGTTTACCG TATTAGGCAG
CGGCTTGGTG ATGTTTTCCA 101 AAACGCCCAA TCCGCGCGTG TTGTCGTTTG
GTTTGGCATT TGCCGGCGGT 151 GCGATGGTGT ATGTTTCCCT GACGGAGATT
TTCAGTAAGT CCAGCGAGGC 201 GTTCGCTGAA ATTTATGATA AAGACCACGC
GTTTGCGGCG GCGACCATGG 251 CATTTTTGGC AGGGATGGGC GGCATTGCGC
TGATTGACCG TCTGGTGCCG 301 AACCCGCATG AAACTTTAGA CGCGCAAGAC
CCGTCGTTTC AAGAAAGCAA 351 ACGCCGCCAT ATCGCGCGAG TCGGCATGAT
GGCGGCGTTT GCGATTACTG 401 CGCACAATTT CCCCGAAGGC TTGGCGACGT
TTTTTGCCAC ATTGGAAAAT 451 CCAGCAGTCG GGATGCCTTT GGCCTTGGCG
ATTGCCATCC ATAATATTCC 501 GGAGGGCATT TCCATCGCCG CGCCGGTTTA
TTTTGCCACC CGCAGCCGTA 551 AGAAAACGGT GTGGGCGTGT CTGCTATCCG
GCTTGGCCGA GCCGTTGGGG 601 GCGGCTTTGG GCTATTTGGT TTTGCAGCCG
TTTTTGTCGC CTGCCGTGTT 651 TGGTTCGGTA TTCGGCGTGA TAGCCGGTGT
GATGGTGTTT TTGGCGTTGG 701 ACGAGCTGCT GCCGGCTGCC AAACGCTATT
CAGACGGCCA TGAAACCGTT 751 TACGGCCTGA CAATGGGCAT GGCGGTGATT
GCCGTCAGCC TGGTATTGTT 801 CCATTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2708; ORF
901.a>:
TABLE-US-03184 a901.pep 1 MPDFSMSNLA VAFSITLAAG LFTVLGSGLV
MFSKTPNPRV LSFGLAFAGG 51 AMVYVSLTEI FSKSSEAFAE IYDKDHAFAA
ATMAFLAGMG GIALIDRLVP 101 NPHETLDAQD PSFQESKRRH IARVGMMAAF
AITAHNFPEG LATFFATLEN 151 PAVGMPLALA IAIHNIPEGI SIAAPVYFAT
RSRKKTVWAC LLSGLAEPLG 201 AALGYLVLQP FLSPAVFGSV FGVIAGVMVF
LALDELLPAA KRYSDGHETV 251 YGLTMGMAVI AVSLVLFHF* m901/a901 98.9%
identity in 269 aa overlap 10 20 30 40 50 60 m901.pep
MPDFSMSNLAVAFSITLAAGLFTVLXSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEI
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| a901
MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEI 10 20
30 40 50 60 70 80 90 100 110 120 m901.pep
FSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNPHETLDAQDPSFQESKRRH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a901
FSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNPHETLDAQDPSFQESKRRH 70 80
90 100 110 120 130 140 150 160 170 180 m901.pep
IARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALAIAIHNIPEGISIAAPVYFAT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a901
IARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALAIAIHNIPEGISIAAPVYFAT 130
140 150 160 170 180 190 200 210 220 230 240 m901.pep
RSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFGSVFGVIAGVMVFLALDELXPAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| a901
RSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFGSVFGVIAGVMVFLALDELLPAA 190
200 210 220 230 240 250 260 270 m901.pep
KRYSDGHETVYGLTTGMAVIAVSLVLFHFX |||||||||||||| ||||||||||||||| a901
KRYSDGHETVYGLTMGMAVIAVSLVLFHFX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2709>:
TABLE-US-03185 g902.seq 1 ATGCCGTCCG AACCCGAACG GCGGCATGGC
AATACTGCCC TACCCTTCCC 51 GATAGCCGCA CGCCCAACGG TCGGTTTTTC
CGGCAAGCCT TTCAAGATAA 101 CCGGCAAGTG TGTCGTATTG CGCCGCCGCA
TTGTCCAAGC GGTTGATTTC 151 ACGCCGCGCC TGTTCGCCGT CGGGCATTTC
GCCGATGTAC CAGCCTATGT 201 GTTTGCGTGC GATGCGCACA CCGACGGTCT
CACCATAAAA CGCGTGCATG 251 GCGCGGATGT GGTTCAAAAT GGCGGCTCTG
CATTCTGCCA AACTCAAGGC 301 AGGCGGTAAA ACGCCGTGTT CGGCATAATG
CTTCAAATCG CGGAAAAACC 351 ACGGCCTGCC TTGCGCGCCG CGCCCTATCA
TGATGCCGTC GGCGGCGGTT 401 TGTTTGAGGA cggCGGCGGC TTTTTgcggc
GAagtGATGT CGCCGTTGac 451 cCaggCCGGG ATGTTCAGAc ggCTTTTGGT
CTCGGcgatg agttCGTAAC 501 gcGCCTCGCC TTTGTACATT TGCGTGcgcG
CGcgcccgtg aacggcaaGg 551 gcggcaatgc cgcaatcttc ggcgattttg
gcgacggcgG gcaggttttg 601 atcgtcgtcg tgccaaccca AacggGTTTT
GaggGTAACG GGTAcgcCCG 651 CCGCCTTgac caccgcctcc aAAatggcGg
caaccagcgg CTCGTCCTGC 701 ATCagcGCGC TACCGGCTTG GACGTTGCAC
ACTTTCttgg cgggGCAGCC 751 CATAttgATG TCGATGACCT GCGCCCCGAG
TCCGACGTTg taacgcgccg 801 catCCGCCAT CtgttcggGG TCGCTGCCGG
CAATCTGCAC GGCAACGATG 851 CCGccttcat cggcaAAAtc actgcggtgc
aGGGTTTTTC CGGTATTCCT 901 GAGCGTCGGA TCGCTGGCCA GCATTTCGCA
CACCGCCCAA CCTGCGCCAA 951 ACGCCCGACA GAGGCGGCGG AAGGGTTTGT
CGGCAATGCC CGCCATCGGC 1001 GCAAGTGCGA TGGGGTTGTC GATAAAATAA
CCGCCGATGT GCATAATGGG 1051 CCCGCGTTTC AAAAAAGTGC GCCATTGTAC
ATTTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2710; ORF
902.ng>:
TABLE-US-03186 g902.pep 1 MPSEPERRHG NTALPFPIAA RPTVGFSGKP
FKITGKCVVL RRRIVQAVDF 51 TPRLFAVGHF ADVPAYVFAC DAHTDGLTIK
RVHGADVVQN GGSAFCQTQG 101 RR*NAVFGIM LQIAEKPRPA LRAAPYHDAV
GGGLFEDGGG FLRRSDVAVD 151 PGRDVQTAFG LGDEFVTRLA FVHLRARAPV
NGKGGNAAIF GDFGDGGQVL 201 IVVVPTQTGF EGNGYARRLD HRLQNGGNQR
LVLHQRATGL DVAHFLGGAA 251 HIDVDDLRPE SDVVTRRIRH LFGVAAGNLH
GNDAAFIGKI TAVQGFSGIP 301 ERRIAGQHFA HRPTCAKRPT EAAEGFVGNA
RHRRKCDGVV DKITADVHNG 351 PAFQKSAPLY IF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2711>:
TABLE-US-03187 m902.seq 1 TTGCACTTTC AAAGGATAAT CAAGTGTTCA
GAAGGCATTT GGGCGGTAGG 51 CGCACGCCCA ACTGTCGGTT TTTTCGGCAA
GTCTTTCAAG ATAACCTGCA 101 AGCATGTCGT ATTGCGCCGC CGCACTGTCC
AAGCGGTTGA TTTCACGACG 151 TgTCTgTTCG CCGTcGGGCA TTTCGTCGAT
GTACCAGCCT ATGTGTTTGC 201 GTGCGATGCG CACACCGGCG GTGTCGCCGT
AAAACGCGTG TATGGCGCGG 251 ATGTGGTTCA AAATAGCGGC GGCGCATTCT
GCCAAACTCA AGGCAGGCGG 301 CAAAACACCG TGTTCGGCAT AATGTTTCAA
ATCGCGGAAG AACCACGGCC 351 TGCCTTGCGC GCCGCGCCCT ATCATAATGC
CGTCGGCGGC GGTTTGTTTG 401 AGGACGGCTT GGGCTTTTTG CGGCGAAGTA
ATGTCGCCGT TGACCCAGAC 451 CGGGATGTTC AGACGGCATT TGGTTTCGGC
GATGAGTTCG TAACGCGCTT 501 CGCCTTTGTA CATTTGCGTA CGCGTGCGTC
CGTGGACGGC AAGGGCGGCG 551 ATGCCGCAAT CTTCGGCGAT TTTGGCGATG
ACGGGCAGGT TTTGATGGTC 601 GTCGTGCCAA CCCAAACGGG TTTTGAGGGT
AACGGGTACG CCTGCCGCAC 651 GGACGACGGC TTCCAAAATG GCGGCAACCA
GCGGCTCGTT CTGCATCAGC 701 GCGCTACCGG CTTGGACATT GCAGACTTTT
TTAGCGGGAC AGCCCATGTT 751 GATGTCGATA AGCTGCGCCC CAAGGCTGAC
GTTGTAACGC GCGGCATCCG 801 CCATCTGCTG CGGATCGCTT CCGGCAATCT
GCACGGCAAC AATGCCGCCT 851 TCATCGGCAA AATCGCTGCG GTGCAAGGTT
TTTCTAGTAT TTCTGAGCGT 901 CGGGTCGCTG GTCAGCATTT CGCACACCGC
CCAACCTGCG CCAAAATCTC 951 GGCAAAGTCG GCGGAACGGT TTGTCGGTAA
TGCCCGCCAT CGGcGCaAGT 1001 GCGATGGGGT TGTCGATAAA ATAGCCGCCG
ATGTGCATAA TGGATCCGCG 1051 TTTCAAAAAA GTACGCCATT GTACATTTTT TAA
This corresponds to the amino acid sequence <SEQ ID 2712; ORF
902>:
TABLE-US-03188 m902.pep 1 LHFQRIIKCS EGIWAVGARP TVGFFGKSFK
ITCKHVVLRR RTVQAVDFTT 51 CLFAVGHFVD VPAYVFACDA HTGGVAVKRV
YGADVVQNSG GAFCQTQGRR 101 QNTVFGIMFQ IAEEPRPALR AAPYHNAVGG
GLFEDGLGFL RRSNVAVDPD 151 RDVQTAFGFG DEFVTRFAFV HLRTRASVDG
KGGDAAIFGD FGDDGQVLMV 201 VVPTQTGFEG NGYACRTDDG FQNGGNQRLV
LHQRATGLDI ADFFSGTAHV 251 DVDKLRPKAD VVTRGIRHLL RIASGNLHGN
NAAFIGKIAA VQGFSSISER 301 RVAGQHFAHR PTCAKISAKS AERFVGNARH
RRKCDGVVDK IAADVHNGSA 351 FQKSTPLYIF *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 902
shows 80.9% identity over a 345 aa overlap with a predicted ORF
(ORF 902.ng) from N. gonorrhoeae:
TABLE-US-03189 m902/g902 10 20 30 40 50 m902.pep
LHFQRIIKCSEGIWAVGARPTVGFFGKSFKITCKHVVLRRRTVQAVDFTTCLFAVGHF
::||||||| || |||| | |||||| ||||||| ||||||| g902
MPSEPERRHGNTALPFPIAARPTVGFSGKPFKITGKCVVLRRRIVQAVDFTPRLFAVGHF 10 20
30 40 50 60 60 70 80 90 100 110 m902.pep
VDVPAYVFACDAHTGGVAVKRVYGADVVQNSGGAFCQTQGRRQNTVFGIMFQIAEEPRPA
:||||||||||||| |:::|||:|||||||:|:||||||||| |:|||||:||||:|||| g902
ADVPAYVFACDAHTDGLTIKRVHGADVVQNGGSAFCQTQGRRXNAVFGIMLQIAEKPRPA 70 80
90 100 110 120 120 130 140 150 160 170 m902.pep
LRAAPYHNAVGGGLFEDGLGFLRRSNVAVDPDRDVQTAFGFGDEFVTRFAFVHLRTRASV
|||||||:|||||||||| ||||||:||||| ||||||||:|||||||:||||||:|| | g902
LRAAPYHDAVGGGLFEDGGGFLRRSDVAVDPGRDVQTAFGLGDEFVTRLAFVHLRARAPV 130
140 150 160 170 180 180 190 200 210 220 230 m902.pep
DGKGGDAAIFGDFGDDGQVLMVVVPTQTGFEGNGYACRTDDGFQNGGNQRLVLHQRATGL
:||||:||||||||| ||||:||||||||||||||| | | :||||||||||||||||| g902
NGKGGNAAIFGDFGDGGQVLIVVVPTQTGFEGNGYARRLDHRLQNGGNQRLVLHQRATGL 190
200 210 220 230 240 240 250 260 270 280 290 m902.pep
DIADFFSGTAHVDVDKLRPKADVVTRGIRHLLRIASGNLHGNNAAFIGKIAAVQGFSSIS |:|
|::|:||:||| |||::||||| ||||: :|:||||||:|||||||:||||||:| g902
DVAHFLGGAAHIDVDDLRPESDVVTRRIRHLFGVAAGNLHGNDAAFIGKITAVQGFSGIP 250
260 270 280 290 300 300 310 320 330 340 350 m902.pep
ERRVAGQHFAHRPTCAKISAKSAERFVGNARHRRKCDGVVDKIAADVHNGSAFQKSTPLY
|||:||||||||||||| :::|| ||||||||||||||||||:|||||| |||||:||| g902
ERRIAGQHFAHRPTCAKRPTEAAEGFVGNARHRRKCDGVVDKITADVHNGPAFQKSAPLY 310
320 330 340 350 360 360 m902.pep IFX ||| g902 IFX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2713>:
TABLE-US-03190 a902.seq 1 TTGCACTTTC AAAGGATAAT CAAGTGTTCA
GAAGGCATTT GGGCGGTAGG 51 CGCACGCCCA ACTGTCGGTT TTTTCGGCAA
GTCTTTCAAG ATAACCTGCA 101 AACATGTCGT ATTGCGCCGC CGCACTGTCC
AAGCGGTTGA TTTCACGACG 151 TGTCTGTTCG CCGTCGGGCA TTTCGTCGAT
GTACCAGCCT ATGTGTTTGC 201 GTGCGATGCG CACACCGGCG GTGTCGCCGT
AAAACGCGTG CATGGCTCGG 251 ATGTGGTTCA AAATAGTGGC GGTACATTCT
GCCAAACTCA AGGCAGGCGG 301 TAAAACACCG TGTTCGGCGT AATGTTTCAA
ATCGCGGAAG AACCACGGTC 351 TGCCTTGCGC GCCGCGCCCT ATCATAATGC
CGTCTGCGGC GGTTTGTTTG 401 AGGACGGCTT GGGCTTTTTG CGGCGAGGTA
ATGTCGCCGT TGACCCAGAC 451 CGGGATGTTC AGACGGCATT TGGTTTCGGC
AATCAGGTCG TAAGCCGCTT 501 CGCCTTTGTA CATTTGCGTG CGCGTGCGTC
CGTGGACGGC AAGGGCGGCA 551 ATGCCGCAAT CTTCGGCGAT TTTGGCGATG
ACGGGCAGGT TTTGATGGTC 601 GTCGTGCCAA CCCAAACGGG TTTTGAGGGT
AACGGGTACG CCCGCCGCTT 651 TGACCACCGC CTCCAAAATG GCGGCAACCA
GCGGCTCGTT CTGCATCAGC 701 GCGCTACCGG CTTGGACATT GCAGACTTTT
TTAGCGGGAC AGCCCATGTT 751 GATGTCGATA AGCTGCGCCC CAAGGCTGAC
GTTGTAACGC GCGGCATCCG 801 CCATCTGCTG CGGATCGCTT CCGGCAATCT
GCACGGCAAC AATGCCGCCT 851 TCATCGGCAA AATCGCTGCG GTGCAAGGTT
TTTCTAGTAT TTCTGAGCGT 901 CGGGTCGCTG GTCAGCATTT CGCACACCGC
CCAACCTGCG CCAAAATCTC 951 GGCAAAGTCG GCGGAACGGT TTGTCGGTAA
TGCCCGCCAT CGGCGCAAGT 1001 GCGATGGGGT TGTCGATAAA ATAGCCGCCG
ATGTGCATAA TGGATCCGCG 1051 TTTCAAAAAA GTACGCCATT GTACATTTTT TAA
This corresponds to the amino acid sequence <SEQ ID 2714; ORF
902.a>:
TABLE-US-03191 a902.pep 1 LHFQRIIKCS EGIWAVGARP TVGFFGKSFK
ITCKHVVLRR RTVQAVDFTT 51 CLFAVGHFVD VPAYVFACDA HTGGVAVKRV
HGSDVVQNSG GTFCQTQGRR 101 *NTVFGVMFQ IAEEPRSALR AAPYHNAVCG
GLFEDGLGFL RRGNVAVDPD 151 RDVQTAFGFG NQVVSRFAFV HLRARASVDG
KGGNAAIFGD FGDDGQVLMV 201 VVPTQTGFEG NGYARRFDHR LQNGGNQRLV
LHQRATGLDI ADFFSGTAHV 251 DVDKLRPKAD VVTRGIRHLL RIASGNLHGN
NAAFIGKIAA VQGFSSISER 301 RVAGQHFAHR PTCAKISAKS AERFVGNARH
RRKCDGVVDK IAADVHNGSA 351 FQKSTPLYIF * m902/a902 94.7% identity in
360 aa overlap 10 20 30 40 50 60 m902.pep
LHFQRIIKCSEGIWAVGARPTVGFFGKSFKITCKHVVLRRRTVQAVDFTTCLFAVGHFVD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a902
LHFQRIIKCSEGIWAVGARPTVGFFGKSFKITCKHVVLRRRTVQAVDFTTCLFAVGHFVD 10 20
30 40 50 60 70 80 90 100 110 120 m902.pep
VPAYVFACDAHTGGVAVKRVYGADVVQNSGGAFCQTQGRRQNTVFGIMFQIAEEPRPALR
||||||||||||||||||||:|:||||||||:|||||||| |||||:||||||||| ||| a902
VPAYVFACDAHTGGVAVKRVHGSDVVQNSGGTFCQTQGRRXNTVFGVMFQIAEEPRSALR 70 80
90 100 110 120 130 140 150 160 170 180 m902.pep
AAPYHNAVGGGLFEDGLGFLRRSNVAVDPDRDVQTAFGFGDEFVTRFAFVHLRTRASVDG
|||||||| |||||||||||||: |||||||||||||||||:: |:||||||||:|||||| a902
AAPYHNAVCGGLFEDGLGFLRRGNVAVDPDRDVQTAFGFGNQVVSRFAFVHLRARASVDG 130
140 150 160 170 180 190 200 210 220 230 240 m902.pep
KGGDAAIFGDFGDDGQVLMVVVPTQTGFEGNGYACRTDDGFQNGGNQRLVLHQRATGLDI
|||:|||||||||||||||||||||||||||||| | | :||||||||||||||||||| a902
KGGNAAIFGDFGDDGQVLMVVVPIQTGFEGNGYARRFDHRLQNGGNQRLVLHQRATGLDI 190
200 210 220 230 240 250 260 270 280 290 300 m902.pep
ADFFSGTAHVDVDKLRPKADVVTRGIRHLLRIASGNLHGNNAAFIGKIAAVQGFSSISER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a902
ADFFSGTAHVDVDKLRPKADVVTRGIRHLLRIASGNLHGNNAAFIGKIAAVQGFSSISER 250
260 270 280 290 300 310 320 330 340 350 360 m902.pep
RVAGQHFAHRPTCAKISAKSAERFVGNARHRRKCDGVVDKIAADVHNGSAFQKSTPLYIF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a902
RVAGQHFAHRPTCAKISAKSAERFVGNARHRRKCDGVVDKIAADVHNGSAFQKSTPLYIF 310
320 330 340 350 360 m902.pep X | a902 X
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2715>:
TABLE-US-03192 g903.seq 1 ATGGCAACAC AGGTAGGCGG TGCAAattcG
gatgaggCAA GCCCCTGCTT 51 TCCTATTTCT GAGGTGGAaT TGGTGGGTGA
aGaaacggct aAATTCCGgt 101 tTGCGCTcaa ccaTGCCTTG tgccAAACAC
ATTTTGtttc cGgcaagtgt 151 CTGcATGcgg gcgacatTAA TCAAAtcaTG
TCCTTAGCAC AAAATGCTTT 201 GATCGGCAGG GGATATACCA CGACCCGTAT
CTTGGCTGCG CCACAGGATT 251 TGAATAGTGG caaGCTTCAA TTAAccctga
tgccggGCTA TCtgcgctcC 301 ATAcgaATCG atcggtccaa cgatgatcaa
ACCCATgcAG GACGTATTGC 351 AGCATTCCAA AACAAATTTC CCACCCGCTC
GAACGATCTG TTGAATCTGC 401 GTGATTTGGA ACAAGGACTG GAAAATCTCA
AATGTCTCCC GACTGCGGAA 451 GCCGATCTCC AAATCgttcc cgtaGAGAGA
GAACcAAACC AAAGTGATGT 501 CGTGGTGCAA TGGCGGTAAC GTCTGCTGCC
CTACTGTGTG AGTGTGGGGA 551 TGGATAATTC GGGTAGTGAG GCGACAGGAA
AATACCAAGG AAATATCACT 601 TTCTCTGCCG ACAATCCTTT TggactgAGT
GATATGTTCT ATGTAAATTA 651 TGGACGTTCA ATTGGCGGTA CGcccgATGA
GGAAAATTTT GACGGCCATC 701 GCAAAGAAGG CGGATCAAAC AATTACGCCG
TACATTATTC AGCCCCTTTC 751 GGTAAATGGA CATGGGCATT CAATCACAAT
GGCTACCGTT ACCATCAGGC 801 GGTTTCCGGA TTATCGGAAG TCTATGACTA
TAATGGAAAA AGTTACAACA 851 CTGATTTCGG CTTCAACCGC CTGTTGTATC
GTGATGCCAA ACGCAAAACC 901 TATCTCAGTG TAAAACTGTG GACGAGGGAA
ACAAAAAGTT ACATTGATGA 951 TGCCGAACTG ACTGTACAAC GGCGTAAAAC
CACAGGTTGG TTGGCAGAAC 1001 TTTCCCACAA AGGATATATC GGTCGCAGTA
CGGCAGATTT TAAGTTGAAA 1051 TATAAACACG GCACCGGCAT GAAAGATGCT
CTGCGCGCGC CTGAAGAAGC 1101 CTTTGGCGAA GGCACGTCAC GTATGAAAAT
TTGGACGGCA TCGGCTGATG 1151 TAAATACTCC TTTTCAAATC GGTAAACAGC
TATTTGCCTA TGACACATCC 1201 GTTCATGCAC AATGGAACAA AACCCCGCTA
ACATCGCAAG ACAAACTGGC 1251 TATCGGCGGA CACCACACCG TACGTGGCTT
CGACGGTGAA ATGAGTTTGC 1301 CTGCCGAGCG GGGATGGTAT TGGCGCAACG
ATTTGAGCTG GCAATTTAAA 1351 CCAGGCCATC AGCTTTATCT TGGGGCTGAT
GTAGGACATG TTTCAGGACA 1401 ATCCGCCAAA TGGTTATCGG GCCAAACTCT
AGCCGGCACA GCAATTGGGA 1451 TACGCGGGCA GATAAAGCTT GGCGGCAACC
TGCATTACGA TATATTTACC 1501 GGCCGTGCAT TGAAAAAGCC cgaatatttt
cAGACGAAGA Aatgggtaac 1551 ggggtTTCAG gtgggttatt cgTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2716; ORF
903.ng>:
TABLE-US-03193 g903.pep 1 MATQVGGANS DEASPCFPIS EVELVGEETA
KFRFALNHAL CQTHFVSGKC 51 LHAGDINQIM SLAQNALIGR GYTTTRILAA
PQDLNSGKLQ LTLMPGYLRS 101 IRIDRSNDDQ THAGRIAAFQ NKFPTRSNDL
LNLRDLEQGL ENLKCLPTAE 151 ADLQIVPVER EPNQSDVVVQ WRXRLLPYCV
SVGMDNSGSE ATGKYQGNIT 201 FSADNPFGLS DMFYVNYGRS IGGTPDEENF
DGHRKEGGSN NYAVHYSAPF 251 GKWTWAFNHN GYRYHQAVSG LSEVYDYNGK
SYNTDFGFNR LLYRDAKRKT 301 YLSVKLWTRE TKSYIDDAEL TVQRRKTTGW
LAELSHKGYI GRSTADFKLK 351 YKHGTGMKDA LRAPEEAFGE GTSRMKIWTA
SADVNTPFQI GKQLFAYDTS 401 VHAQWNKTPL TSQDKLAIGG HHTVRGFDGE
MSLPAERGWY WRNDLSWQFK 451 PGHQLYLGAD VGHVSGQSAK WLSGQTLAGT
AIGIRGQIKL GGNLHYDIFT 501 GRALKKPEYF QTKKWVTGFQ VGYSF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2717>:
TABLE-US-03194 m903.seq 1 ATGCAGCGTC AGCAGCACAT AGATGCTGAA
TTGTTAACTG ATGCAAATGT 51 CCGTTTCGAG CAACCATTGG AGAAGAACAA
TTATGTCCTG AGTGAAGATG 101 AAACACCGTG TACTCGGGTA AATTACATTA
GTTTAGATGA TAAGACGGTG 151 CGCAAATTTT CTTTTCTTCC TTCTGTGCTC
ATGAAAGAAA CAGCTTTTAA 201 AACTGGGATG TGTTTAGGTT CCAATAATTT
GAGCAGGCTA CAAAAAGCCG 251 CGCAACAGAT ACTGATCGTG CGTGGCTACC
TCACTTCCCA AGCTATTATC 301 CAaCCACAGA ATATGGATTC GGGAATTCTG
AAATTACGGG TATCAGCAGG 351 CGAAATAGGG GATATCCGCT ATGAAGAAAA
ACGGGATGGG AAGTCTGCCG 401 AGGGCAGTAT TAGTGCATTC AATAACAAAT
TTCCCTTATA TAGGAACAAA 451 ATTCTCAATC TTCGCGATGT AGAGCAGGGC
TTGGAAAACC TGCGTCGTTT 501 GCCGAGTGTT AAAACAGATA TTCAGATTAT
ACCGTCCGAA GAAGAAGGCA 551 AAAGCGATTT ACAGATCAAA TGGCAGCAGA
ATAAACCCAT ACGGTTCAGT 601 ATCGGTATAG ATGATGCGGG CGGCAAAACG
ACCGGCAAAT ATCAAGGAAA 651 TGTCGCTTTA TCGTTCGATA ACCCTTTGGG
CTTAAGCGAT TTGTTtTATG 701 TTTCATATGG ACGCGGTTTG GCGCACAAAA
CGGACTTGAC TGATGCCACC 751 GGTACGGAAA CTGAAAGCGG ATCCAGAAGT
TACAGCGTGC ATTATTCGGT 801 GCCCGTAAAA AAATGGCTGT TTTCTTTTAA
TCACAATGGA CATCGTTACC 851 ACGAAGCAAC CGAAGGCTAT TCCGTCAATT
ACGATTACAA CGGCAAACAA 901 TATCAGAGCA GCCTGGCCGC CGAGCGCATG
CTTTGGCGTA ACAGACTTCA 951 TAAAACTTCA GTCGGAATGA AATTATGGAC
ACGCCAAACC TATAAATACA 1001 TCGACGATGC CGAAATCGAA GTACAACGCC
GCCGCTCTGC AGGCTGGGAA 1051 GCCGAATTGC GCCACCGTGC TTACCTCAAC
CGTTGGCAGC TTGACGGCAA 1101 GTTGTCTTAC AAACGCGGGA CCGGCATGCG
CCAAAGTATG CCTGCACCGG 1151 AAGAAAACGG CGGCGATATT CTTCCAGGTA
CATCTCGTAT GAAAATCATT 1201 ACTGCCAGTT TGGACGCAGC CGCCCCATTT
AyTTTAGGCA AACAGCAGTT 1251 TTTCTACGCA ACCGCCATTC AAGCTCAATG
GAACAAAACG CCGTTGGTTG 1301 CCCAAGATAA ATTGTCAATC GGCAGCCGCT
ACACCGTTCG CGGATTTGAT 1351 GGGGAGCAGA GTCTTTTCGG AGAGCGAGGT
TTCTACTGGC AGAATACTTT 1401 AACTTGGTAT TTTCATCCGA ACCATCAGTT
CTATCTCGGT GCGGACTATG 1451 GCCGCGTATC TGGCGAAAGT GCACAATATG
TATCGGGCAA GCAGCTGATG 1501 GGTGCAGTGG TCGGCTTCAG AGGAGGGCAT
AAAGTAGGCG GTATGTTTGC 1551 TTATGATCTG TTTGCCGGCA AGCCGCTTCA
TAAACCCAAA GGCTTTCAGA 1601 CGACCAACAC CGTTTACGGC TTCAACTTGA
ATTACAGTTT CTAA
This corresponds to the amino acid sequence <SEQ ID 2718; ORF
903>:
TABLE-US-03195 m903.pep 1 MQRQQHIDAE LLTDANVRFE QPLEKNNYVL
SEDETPCTRV NYISLDDKTV 51 RKFSFLPSVL MKETAFKTGM CLGSNNLSRL
QKAAQQILIV RGYLTSQAII 101 QPQNMDSGIL KLRVSAGEIG DIRYEEKRDG
KSAEGSISAF NNKFPLYRNK 151 ILNLRDVEQG LENLRRLPSV KTDIQIIPSE
EEGKSDLQIK WQQNKPIRFS 201 IGIDDAGGKT TGKYQGNVAL SFDNPLGLSD
LFYVSYGRGL AHKTDLTDAT 251 GTETESGSRS YSVHYSVPVK KWLFSFNHNG
HRYHEATEGY SVNYDYNGKQ 301 YQSSLAAERM LWRNRLHKTS VGMKLWTRQT
YKYIDDAEIE VQRRRSAGWE 351 AELRHRAYLN RWQLDGKLSY KRGTGMRQSM
PAPEENGGDI LPGTSRMKII 401 TASLDAAAPF XLGKQQFFYA TAIQAQWNKT
PLVAQDKLSI GSRYTVRGFD 451 GEQSLFGERG FYWQNTLTWY FHPNHQFYLG
ADYGRVSGES AQYVSGKQLM 501 GAVVGFRGGH KVGGMFAYDL FAGKPLHKPK
GFQTTNTVYG FNLNYSF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 903
shows 48.9% identity over a 519 aa overlap with a predicted ORF
(ORF 903.ng) from N. gonorrhoeae:
TABLE-US-03196 m903/g903 10 20 30 40 50 60 m903.pep
MQRQQHIDAELLTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTVRKFSFLPSVL |::
:|| :: : | : : || | : g903 MATQVGGANSDEASPCFPISEVELVGEETAKFRFALNHA
10 20 30 70 80 90 100 110 120 m903.pep
MKETAFKTGMCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIG : :| |
:| || ::::::::: ||: || ||| |:: : ||:::|| |:| : | : g903
LCQTHFVSGKCLHAGDINQIMSLAQNALIGRGYTTTRILAAPQDLNSGKLQLTLMPGYLR 40 50
60 70 80 90 130 140 150 160 170 180 m903.pep
DIRYEEKRDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLPSVKTDIQIIPSE :||
::: | :: | |:||:|||| | :|||||:|||||||: ||::::|:||:| | g903
SIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLEQGLENLKCLPTAEADLQIVPVE 100
110 120 130 140 150 190 200 210 220 230 m903.pep
EE-GKSDLQIKWQQNK-PIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGR :|
::||: ::| | |:|:|::|:::|||||||:::| |||:||||:|||:||| g903
REPNQSDVVVQWRXRLLPYCVSVGMDNSGSEATGKYQGNITFSADNPFGLSDMFYVNYGR 160
170 180 190 200 210 240 250 260 270 280 290 m903.pep
GLAHKTDLTDATGTETESGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNG ::: |
: | : |:|| :|:||||:| || ::|||||:|||:|: | | ||||| g903
SIGGTPDEENFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRYHQAVSGLSEVYDYNG 220
230 240 250 260 270 300 310 320 330 340 350 m903.pep
KQYQSSLAAERMLWRNRLHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAY
|:|::::: :|:|:|: :|| :::|||||:| :||||||: ||||:::|| ||| |::| g903
KSYNTDFGFNRLLYRDAKRKTYLSVKLWTRETKSYIDDAELTVQRRKTTGWLAELSHKGY 280
290 300 310 320 330 360 370 380 390 400 410 m903.pep
LNRWQLDGKLSYKRGTGMRQSMPAPEENGGDILPGTSRMKIITASLDAAAPFXLGKQQFF ::| |
||:||:||||:::: |||| |: ||||||| ||| |: :|| :||| | g903
IGRSTADFKLKYKHGTGMKDALRAPEEAFGE---GTSRMKIWTASADVNTPFQIGKQLFA 340
350 360 370 380 390 420 430 440 450 460 470 m903.pep
YATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNHQFY |
|:::||||||||::||||:||:::||||||||:|| :|||:||:| |:| |:|:||:| g903
YDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLPAERGWYWRNDLSWQFKPGHQLY 400
410 420 430 440 450 480 490 500 510 520 530 m903.pep
LGADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQTTNTV ||||
|:|||:||:::||: | |:::|:|| |:|| : ||:|:|: |:||: ||| : | g903
LGADVGHVSGQSAKWLSGQTLAGTAIGIRGQIKLGGNLHYDIFTGRALKKPEYFQTKKWV 460
470 480 490 500 510 540 m903.pep YGFNLNYSFX ||:::|||| g903
TGFQVGYSFX 520
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2719>:
TABLE-US-03197 a903.seq 1 ATGCAGCGTC AGCAGCACAT AGATGCTGAA
TTGTTAACTG ATGCAAATGT 51 CCGTTTCGAG CAACCATTGG AGAAGAACAA
TTATGTCCTG AGTGAAGATG 101 AAACACCGTG TACTCGGGTA AATTACATTA
GTTTAGATGA TAAGACGGCG 151 CGCAAATTTT CTTTTCTTCC TTCTGTGCTC
ATGAAAGAAA CAGCTTTTAA 201 AACTGGGATG TGTTTAGGTT CCAATAATTT
GAGCAGGCTA CAAAAAGCCG 251 CGCAACAGAT ACTGATTGTG CGTGGCTACC
TCACTTCCCA AGCTATTATC 301 CAACCACAGA ATATGGATTC GGGAATTCTG
AAATTACGGG TATCAGCAGG 351 CGAAATAGGG GATATCCGCT ATGAAGAAAA
ACGGGATGGG AAGTCTGCCG 401 AGGGCAGTAT TAGTGCATTC AATAACAAAT
TTCCCTTATA TAGGAACAAA 451 ATTCTCAATC TTCGCGATGT AGAGCAGGGC
TTGGAAAACC TGCGTCGTTT 501 GCCGAGTGTT AAAACAGATA TTCAGATTAT
ACCGTCCGAA GAAGAAGGCA 551 AAAGCGATTT ACAGATCAAA TGGCAGCAGA
ATAAACCCAT ACGGTTCAGT 601 ATCGGTATAG ATGATGCGGG CGGCAAAACG
ACCGGCAAAT ATCAAGGAAA 651 TGTCGCTTTA TCGTTCGATA ACCCTTTGGG
CTTAAGCGAT TTGTTTTATG 701 TTTCATATGG ACGCGGTTTG GTGCACAAAA
CGGACTTGAC TGATGCCACC 751 GGTACGGAAA CTGAAAGCGG ATCCAGAAGT
TACAGCGTGC ATTATTCGGT 801 GCCCGTAAAA AAATGGCTGT TTTCTTTTAA
TCACAATGGA CATCGTTACC 851 ACGAAGCAAC CGAAGGCTAT TCCGTCAATT
ACGATTACAA CGGCAAACAA 901 TATCAGAGCA GCCTGGCCGC CGAGCGCATG
CTTTGGCGTA ACAGGTTTCA 951 TAAAACTTCA GTCGGAATGA AATTATGGAC
ACGCCAAACC TATAAATACA 1001 TCGACGATGC CGAAATCGAA GTGCAACGCC
GCCGCTCTGC AGGCTGGGAA 1051 GCCGAATTGC GCCACCGTGC TTACCTCAAC
CGTTGGCAGC TTGACGGCAA 1101 GTTGTCTTAC AAACGCGGGA CCGGCATGCG
CCAAAGTATG CCCGCACCTG 1151 AAGAAAACGG CGGCGGTACT ATTCCAGGCA
CATCCCGTAT GAAAATCATA 1201 ACCGCCGGAT TGGATGCAGC GGCCCCGTTT
ATGTTGGGCA AACAGCAGTT 1251 TTTCTACGCA ACCGCCATTC AAGCTCAATG
GAACAAAACG CCTTTGGTTG 1301 CCCAAGACAA GTTGTCTATC GGCAGCCGCT
ACACCGTTNG CGGATTTGAT 1351 GGGGAGCAGA GTCTTTTCGG AGAGCGAGGT
TTCTACTGGC AGAATACTTT 1401 AACTTGGTAT TTTCATCCGA ACCATCAGTT
CTATCTCGGT GCGGACTATG 1451 GCCGCGTATC TGGCGAAAGT GCACAATATG
TATCGGGCAA GCAGCTGATG 1501 GGTGCAGTGG TCGGNTTCAG AGGAGGNCAT
AAAGTAGGCG GTATGTTTGC 1551 TTATGATCTG TTTGCCGGCA AGCCGCTTCA
TAAACCCAAA GGCTTTCAGA 1601 CGACCAACAC CGTTTACGGC TTCAACTTGA
ATTACAGTTT CTAA
This corresponds to the amino acid sequence <SEQ ID 2720; ORF
903.a>:
TABLE-US-03198 a903.pep 1 MQRQQHIDAE LLTDANVRFE QPLEKNNYVL
SEDETPCTRV NYISLDDKTA 51 RKFSFLPSVL MKETAFKTGM CLGSNNLSRL
QKAAQQILIV RGYLTSQAII 101 QPQNMDSGIL KLRVSAGEIG DIRYEEKRDG
KSAEGSISAF NNKFPLYRNK 151 ILNLRDVEQG LENLRRLPSV KTDIQIIPSE
EEGKSDLQIK WQQNKPIRFS 201 IGIDDAGGKT TGKYQGNVAL SFDNPLGLSD
LFYVSYGRGL VHKTDLTDAT 251 GTETESGSRS YSVHYSVPVK KWLFSFNHNG
HRYHEATEGY SVNYDYNGKQ 301 YQSSLAAERM LWRNRFHKTS VGMKLWTRQT
YKYIDDAEIE VQRRRSAGWE 351 AELRHRAYLN RWQLDGKLSY KRGTGMRQSM
PAPEENGGGT IPGTSRMKII 401 TAGLDAAAPF MLGKQQFFYA TAIQAQWNKT
PLVAQDKLSI GSRYTVXGFD 451 GEQSLFGERG FYWQNTLTWY FHPNHQFYLG
ADYGRVSGES AQYVSGKQLM 501 GAVVGFRGGH KVGGMFAYDL FAGKPLHKPK
GFQTTNTVYG FNLNYSF* m903/a903 98.4% identity in 547 aa overlap 10
20 30 40 50 60 m903.pep
MQRQQHIDAELLTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTVRKFSFLPSVL
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| a903
MQRQQHIDAELLTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVL 10 20
30 40 50 60 70 80 90 100 110 120 m903.pep
MKETAFKTGMCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a903
MKETAFKIGMCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIG 70 80
90 100 110 120 130 140 150 160 170 180 m903.pep
DIRYEEKRDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLPSVKTDIQIIPSE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a903
DIRYEEKRDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLPSVKIDIQIIPSE 130
140 150 160 170 180 190 200 210 220 230 240 m903.pep
EEGKSDLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a903
EEGKSDLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGL 190
200 210 220 230 240 250 260 270 280 290 300 m903.pep
AHKTDLTDATGTETESGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQ
:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a903
VHKTDLTDATGTETESGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQ 250
260 270 280 290 300 310 320 330 340 350 360 m903.pep
YQSSLAAERMLWRNRLHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYLN
|||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a903
YQSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYLN 310
320 330 340 350 360 370 380 390 400 410 420 m903.pep
RWQLDGKLSYKRGTGMRQSMPAPEENGGDILPGTSRMKIITASLDAAAPFXLGKQQFFYA
|||||||||||||||||||||||||||| :|||||||||||:||||||| ||||||||| a903
RWQLDGKLSYKRGTGMRQSMPAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQFFYA 370
380 390 400 410 420 430 440 450 460 470 480 m903.pep
TAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNHQFYLG
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| a903
TAIQAQWNKTPLVAQDKLSIGSRYTVXGFDGEQSLFGERGFYWQNTLTWYFHPNHQFYLG 430
440 450 460 470 480 490 500 510 520 530 540 m903.pep
ADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a903
ADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYG 490
500 510 520 530 540 m903.pep FNLNYSFX |||||||| a903 FNLNYSFX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2721>:
TABLE-US-03199 g904.seq 1 ATGATGCAGC ACAATCGTTT CTTCGCGGTC
GGGGCCGGTg gaGACGATGG 51 CGACCGGCGC GCCGCAGACT TCTTCAATCC
GTTTCAAATA TGCTTTGGCA 101 TTGGCAGGCA ATGCGTCGTA GCTTTTCACG
CCGACAGTCG ATTCGCGCCA 151 GCCGGGCATG GTTTCGTAAA TCGGTTTGCA
GGTTTCCACC GCATCCGAAC 201 CGCAAGGCAG GATGTCGGTT TTGCCGCCGC
CTGGCAATTC GTAGCCGACG 251 CAGATATTGA TGGTTTCAAC GCCGTCCATT
ACATCGAGTT TGGTAATGCA 301 CATACCGGAA ATGCCGTTGA TTTGGATGGA
GCGTTTCAGG GCGGCGGCAT 351 CAAACCAGCC GCAGCGGCGC GCGCGGCCGG
TTACCGAACC GAATTCGTGT 401 CCGCGCTCCG CCAAACCTGC GCCTACTTCG
TCGAACAATT CGGTCGGGAA 451 CGGGCCCGAA CCGACGCGCG TGGTATAGGC
TTTGACGATG CCCAAAACAT 501 AATCCAGCAT TTGAGGACCT ACGCCCGCGC
CTGCCGAAGC CGCGCCGGCG 551 AGACAGTTGG ACGAGGTAAC GAAGGGGTAA
GTGCCGTAGT CGATGTCCAA 601 CAACGCACCT TGCGCGCCTT CAAACAGCAG
TTTTTCGCCG TTTTTGTTTT 651 TTTCGTTCAA CACGCgggaC acgtcgGCAA
TCATCGGCGC AATGCGCGGC 701 GCGACTTTTT CGATAACCGC CATCACGTCT
TCCGCTTTAA CCGGTCCGGC 751 GTTATGCAGG TATTGGAGTT GGACGTTGTA
ATAGGCAAGG ACGGCATCCA 801 GTTTTTCACG CAGTTTTTCA GGATGCAGCA
AATCGGCGGC GCGAATGGCG 851 CGGCGTGCCA CTTTGTCTTC GTAGGCAGGG
CCGATGCCGC GGCCGGTCGT 901 GCCGATTTTG CCTTTGCCGC GCGATGCTTC
GCGGGCTTGG TCGAGCGCGA 951 TGTGGTAAGG CAGGATCAGC GGGCAGGTCG
GCGCGATTTT CAGACGGCCT 1001 TCGACGTTTT TCACGCCTGC CGCGTTCAAC
TCGTCGATTT CGCCCAACAG 1051 GGCTTCGGGg gaaacgAcaa cGCCCGAACC
gatGAAGCAA TCCAATCCTT 1101 CGTGCAGGAT ACCGCTCGGA ATCAGGCGCA
AAATGGTTTT TTTGCCGCCG 1151 ACGACCAAGG TATGGCCCGC ATTGTGGCCG
CCTTGGAAGC GCACgacGct 1201 gCCGGCTTCT TCCGCCAGCC AGTCAACGAT
TTTACCTTTA CCCTCGTCGC 1251 CCCACTGTgc gccGATTACT ACAACATTTT
TAGCCATAGC CATATAACCT 1301 ATCGatatTA A
This corresponds to the amino acid sequence <SEQ ID 2722; ORF
904.ng>:
TABLE-US-03200 g904.pep 1 MMQHNRFFAV GAGGDDGDRR AADFFNPFQI
CFGIGRQCVV AFHADSRFAP 51 AGHGFVNRFA GFHRIRTARQ DVGFAAAWQF
VADADIDGFN AVHYIEFGNA 101 HTGNAVDLDG AFQGGGIKPA AAARAAGYRT
EFVSALRQTC AYFVEQFGRE 151 RARTDARGIG FDDAQNIIQH LRTYARACRS
RAGETVGRGN EGVSAVVDVQ 201 QRTLRAFKQQ FFAVFVFFVQ HAGHVGNHRR
NARRDFFDNR HHVFRFNRSG 251 VMQVLELDVV IGKDGIQFFT QFFRMQQIGG
ANGAACHFVF VGRADAAAGR 301 ADFAFAARCF AGLVERDVVR QDQRAGRRDF
QTAFDVFHAC RVQLVDFAQQ 351 GFGGNDNART DEAIQSFVQD TARNQAQNGF
FAADDQGMAR IVAALEAHDA 401 AGFFRQPVND FTFTLVAPLC ADYYNIFSHS
HITYRY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2723>:
TABLE-US-03201 m904.seq 1 ATGATGCAGC ACAATCGTTT CTTCTCGGTC
GGGGCCGgTG GAGACGATGG 51 CGACCGGCGC GCCGCAGACT TCTTCAATCC
GTTTCAAATA TGCTTTGGCG 101 TTTTCGGGCA ATGCGCCGTA GTCCTTCACG
CCGAAAGTGG ATTCGCGCCA 151 GCCGGGCATG GTTTCGTAAA TCGGCTTGCA
GGTTTCCACC GCATCGGAAC 201 CGCAAGGCAG GATGTCGGTT TTGCCGCCGT
CGGGCAATTC ATAGCCGACG 251 CAGATATTGA TGGTTTCAAC GCCGTCCATT
ACATCGAGTT TAGTAATACA 301 CATACCGGAA ATGCCGTTGA TTTGGATGGA
GCGTTTCAGG GCGGCGGCAT 351 CAAACCAGCC GCAGCGGCGT GCGCGTCCGG
TTACCGAACC GAATTCGTGT 401 CCGCGTTCTG CCAAACCTAC GCCTACTTCG
TCGAACAATT CGGTCGGGAA 451 CGGGCCCGAA CCGACGCGCG TGGTATAGGC
TTTGACGATG CCCAAAACAT 501 AATCCAGCAT TTGAGGACCT ACGCCCGCGC
CTGCCGAAGC TGCGCCCGCC 551 AGACAGTTGG ACGAGGTAAC GAAGGGATAA
GTGCCGTAGT CGATGTCCAA 601 CAACGCACCT TGCGCGCCTT CAAACAGCAG
TTTTTCGCCG TTTTTGTTTT 651 TCTCGTTCAA CACGCGGGAC ACGTCGGTAA
TCATCGGCGC AATGCGCGGC 701 GCGACTTTTT CGATAACCGC CATCACGTCT
TCCGCTTTAA CCGGCTCGGC 751 ATTGTGCAGA TGTTGCAGTT GGACATTGTA
ATAGGCAAGG ACGGCATCCA 801 GTTTTTCACG CAGTTTyTCA GGATGCAGCA
AATCGGCGGC GCGAATGGCG 851 CGGCGTGCCA CTTTGTCTTC GTAGGCAGGG
CCGATGCCGC GGCCGGTCGT 901 GCCGATTTTG CCTTTGCCGC GCG.ATcTTC
GCGGGCTTGG TCGAGCGCGA 951 TGTGGTAAGG CAGGATCAGC GGGCAGGTCG
GCGCGATTTT CAGACGGCCT 1001 TCGACGTTTT TCACGCCTGC CGCGTTCAAC
TCGTCGATTT CGCCCAACAG 1051 GGCTTCGGGG GAGACGACAA CGCCCGAACC
GATGAAGCAG TCCAAACTTT 1101 CATGCAGGAT GCCGCTCGGA ATCAGGCGCA
AAATGGTTTT TTTGCCGCCG 1151 ACAACCAAGG TATGGCCCGC ATTGTGGCCG
CCTTGGAAGC GCACCaCGCC 1201 GCCGGCTTCT TCCGCCAGCC AGTCAACGAT
TTTACCTTTA CCCTCGTCGC 1251 CCCACTGTGC GCCGATTAsT ACAACATTTT
TAGCCATAGC CATATAACCT 1301 ATCGATATTA A
This corresponds to the amino acid sequence <SEQ ID 2724; ORF
904>:
TABLE-US-03202 m904.pep 1 MMQHNRFFSV GAGGDDGDRR AADFFNPFQI
CFGVFGQCAV VLHAESGFAP 51 AGHGFVNRLA GFHRIGTARQ DVGFAAVGQF
IADADIDGFN AVHYIEFSNT 101 HTGNAVDLDG AFQGGGIKPA AAACASGYRT
EFVSAFCQTY AYFVEQFGRE 151 RARTDARGIG FDDAQNIIQH LRTYARACRS
CARQTVGRGN EGISAVVDVQ 201 QRTLRAFKQQ FFAVFVFLVQ HAGHVGNHRR
NARRDFFDNR HHVFRFNRLG 251 IVQMLQLDIV IGKDGIQFFT QFXRMQQIGG
ANGAACHFVF VGRADAAAGR 301 ADFAFAAXIF AGLVERDVVR QDQRAGRRDF
QTAFDVFHAC RVQLVDFAQQ 351 GFGGDDNART DEAVQTFMQD AARNQAQNGF
FAADNQGMAR IVAALEAHHA 401 AGFFRQPVND FTFTLVAPLC ADXYNIFSHS
HITYRY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 904
shows 90.4% identity over a 436 aa overlap with a predicted ORF
(ORF 904.ng) from N. gonorrhoeae:
TABLE-US-03203 m904/g904 10 20 30 40 50 60 m904.pep
MMQHNRFFSVGAGGDDGDRRAADFFNPFQICFGVFGQCAVVLHAESGFAPAGHGFVNRLA
||||||||:||||||||||||||||||||||||: ||:|::||:| |||||||||||:| g904
MMQHNRFFAVGAGGDDGDRRAADFFNPFQICFGIGRQCVVAFHADSRFAPAGHGFVNRFA 10 20
30 40 50 60 70 80 90 100 110 120 m904.pep
GFHRIGTARQDVGFAAVGQFIADADIDGFNAVHYIEFSNTHTGNAVDLDGAFQGGGIKPA |||||
||||||||||: ||:||||||||||||||||:|:|||||||||||||||||||| g904
GFHRIRTARQDVGFAAAWQFVADADIDGFNAVHYIEFGNAHTGNAVDLDGAFQGGGIKPA 70 80
90 100 110 120 130 140 150 160 170 180 m904.pep
AAACASGYRTEFVSAFCQTYAYFVEQFGRERARTDARGIGFDDAQNIIQHLRTYARACRS |||
|:|||||||||: || |||||||||||||||||||||||||||||||||||||||| p904
AAARAAGYRTEFVSALRQTCAYFVEQFGRERARTDARGIGFDDAQNIIQHLRTYARACRS 130
140 150 160 170 180 190 200 210 220 230 240 m904.pep
CARQTVGRGNEGISAVVDVQQRTLRAFKQQFFAVFVFLVQHAGHVGNHRRNARRDFFDNR |
:||||||||:||||||||||||||||||||||||:|||||||||||||||||||||| p904
RAGETVGRGNEGVSAVVDVQQRTLRAFKQQFFAVFVFFVQHAGHVGNHRRNARRDFFDNR 190
200 210 220 230 240 250 260 270 280 290 300 m904.pep
HHVFRFNRLGIVQMLQLDIVIGKDGIQFFTQFXRMQQIGGANGAACHFVFVGRADAAAGR
|||||||| |::|:|:||:||||||||||||| ||||||||||||||||||||||||||| p904
HHVFRFNRSGVMQVLELDVVIGKDGIQFFTQFFRMQQIGGANGAACHFVFVGRADAAAGR 250
260 270 280 290 300 310 320 330 340 350 360 m904.pep
ADFAFAARIFAGLVERDVVRQDQRAGRRDFQTAFDVFHACRVQLVDFAQQGFGGDDNART
|||||||| |||||||||||||||||||||||||||||||||||||||||||||:||||| p904
ADFAFAARCFAGLVERDVVRQDQRAGRRDFQTAFDVFHACRVQLVDFAQQGFGGNDNART 310
320 330 340 350 360 370 380 390 400 410 420 m904.pep
DEAVQTFMQDAARNQAQNGFFAADNQGMARIVAALEAHHAAGFFRQPVNDFTFTLVAPLC
|||:|:|:||:|||||||||||||:||||||||||||| ||||||||||||||||||||| p904
DEAIQSFVQDTARNQAQNGFFAADDQGMARIVAALEAHDAAGFFRQPVNDFTFTLVAPLC 370
380 390 400 410 420 430 m904.pep ADXYNIFSHSHITYRYX ||
|||||||||||||| p904 ADYYNIFSHSHITYRYX 430
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2725>:
TABLE-US-03204 a904.seq 1 ATGATGCAGC ACAATCGTTT CTTCGCGGTC
GGGGCCGGTG GAGACGATGG 51 CGACCGGCGC ACCGCAGACT TCTTCAATCC
GTTTCAAATA TGCTTTGGCA 101 TTGGCAGGTA ATGCGTCGTA GCTTTTCACG
CCGAAAGTGG ATTCGCTCCA 151 ACCGGGCATG GTTTCGTAAA TCGGCTTGCA
GGCTTCTACC GCATCAGAGC 201 CGCAAGGCAG GATGTCGGTT TTGCCGCCGT
CGGGCAATTC GTAGCCGACG 251 CAGATATTGA TGGTTTCAAC GCCGTCCATT
ACATCGAGTT TGGTAATACA 301 CATACCGGAA ATGCCGTTGA TTTGGATGGA
GCGTTTCAGG GCGGCGGCAT 351 CAAACCAGCC GCAGCGGCGT GCGCGTCCGG
TTACCGAACC GAATTCGTGT 401 CCGCGTTCTG CCAAACCTGC TCCGACTTCG
TCGAACAATT CGGTCGGGAA 451 CGGGCCCGAA CCGACGCGCG TGGTATAGGC
TTTGACGATG CCCAAAACAT 501 AATCCAGCAT TTGAGGGCCT ACGCCCGCGC
CTGCCGAAGC CGCGCCGGCG 551 AGGCAGTTGG ACGAAGTAAC GAAGGGGTAA
GTGCCGTAGT CGATGTCCAA 601 CAACGCACCT TGCGCGCCTT CAAACAGCAG
TTTTTCGCCG TTTTTGTTTT 651 TTTCGTTCAA CACGCGGGAC ACGTCGGTAA
TCATCGGCGT AATGCGCGGC 701 GCGACTTTTT CGATAACCGC CATCACGTCT
TCCGCTTTCA CCGACTCGGC 751 ATTGTGCAGA TGTTGCAGTT GGACGTTGTA
ATAAGCAAAG ACGGCATCCA 801 GTTTTTCACG CAGTTTTTCA GGATGCAGCA
AATCGGCGGC GCGAATGGCG 851 CGGCGTGCCA CTTTGTCTTC GTAGGCAGGG
CCGATGCCGC GGCCGGTCGT 901 GCCGATTTTG CCTTTGCCGC GCGATGCTTC
TCGGGCTTGG TCGAGCGCGA 951 TGTGATAAGG CAGGATCAGC GGGCAGGTCG
GCGCGATTTT CAGACGGCCT 1001 TCGACGTTTT TCACGCCTGC CGCGTTCAAC
TCGTCGATTT CGCCCAACAG 1051 GGCTTCGGGG GAGACGACAA CGCCCGAACC
GATGAAGCAG TCCAGACTTT 1101 CATGCAGGAT GCCGCTCGGA ATCAGGCGCA
AAATGGTTTT TTTGCCGCCG 1151 ACAACCAAGG TATGACCCGC ATTGTGGCCG
CCTTGGAAGC GCACCACGCC 1201 TCCGGCTTCT TCCGCCAGCC AGTCAACGAT
TTTACCTTTA CCCTCGTCGC 1251 CCCACTGTGC GCCGATTACT ACAACATTTT
TAGCCATAGC CATATAACCT 1301 .TCGATATTA A
This corresponds to the amino acid sequence <SEQ ID 2726; ORF
904.a>:
TABLE-US-03205 a904.pep 1 MMQHNRFFAV GAGGDDGDRR TADFFNPFQI
CFGIGR*CVV AFHAESGFAP 51 TGHGFVNRLA GFYRIRAARQ DVGFAAVGQF
VADADIDGFN AVHYIEFGNT 101 HTGNAVDLDG AFQGGGIKPA AAACASGYRT
EFVSAFCQTC SDFVEQFGRE 151 RARTDARGIG FDDAQNIIQH LRAYARACRS
RAGEAVGRSN EGVSAVVDVQ 201 QRTLRAFKQQ FFAVFVFFVQ HAGHVGNHRR
NARRDFFDNR HHVFRFHRLG 251 IVQMLQLDVV ISKDGIQFFT QFFRMQQIGG
ANGAACHFVF VGRADAAAGR 301 ADFAFAARCF SGLVERDVIR QDQRAGRRDF
QTAFDVFHAC RVQLVDFAQQ 351 GFGGDDNART DEAVQTFMQD AARNQAQNGF
FAADNQGMTR IVAALEAHHA 401 SGFFRQPVND FTFTLVAPLC ADYYNIFSHS HITXRY*
m904/a904 91.3% identity in 436 aa overlap 10 20 30 40 50 60
m904.pep
MMQHNRFFSVGAGGDDGDRRAADFFNPFQICFGVFGQCAVVLHAESGFAPAGHGFVNRLA
||||||||:|||||||||||:||||||||||||: |:|::||||||||:||||||||| a904
MMQHNRFFAVGAGGDDGDRRTADFFNPFQICFGIGRXCVVAFHAESGFAPTGHGFVNRLA 10 20
30 40 50 60 70 80 90 100 110 120 m904.pep
GFHRIGTARQDVGFAAVGQFIADADIDGFNAVHYIEFSNTHTGNAVDLDGAFQGGGIKPA ||:||
:|||||||||||||:||||||||||||||||:|||||||||||||||||||||| a904
GFYRIRAARQDVGFAAVGQFVADADIDGFNAVHYIEFGNTHTGNAVDLDGAFQGGGIKPA 70 80
90 100 110 120 130 140 150 160 170 180 m904.pep
AAACASGYRTEFVSAFCQTYAYFVEQFGRERARTDARGIGFDDAQNIIQHLRTYARACRS
||||||||||||||||||| : ||||||||||||||||||||||||||||||:||||||| a904
AAACASGYRTEFVSAFCQTCSDFVEQFGRERARTDARGIGFDDAQNIIQHLRAYARACRS 130
140 150 160 170 180 190 200 210 220 230 240 m904.pep
CARQTVGRGNEGISAVVDVQQRTLRAFKQQFFAVFVFLVQHAGHVGNHRRNARRDFFDNR |
::|||:|||:||||||||||||||||||||||||:|||||||||||||||||||||| a904
RAGEAVGRSNEGVSAVVDVQQRTLRAFKQQFFAVFVFFVQHAGHVGNHRRNARRDFFDNR 190
200 210 220 230 240 250 260 270 280 290 300 m904.pep
HHVFRFNRLGIVQMLQLDIVIGKDGIQFFTQFXRMQQIGGANGAACHFVFVGRADAAAGR
||||||:|||||||||||:||:|||||||||| ||||||||||||||||||||||||||| a904
HHVFRFHRLGIVQMLQLDVVISKDGIQFFTQFFRMQQIGGANGAACHFVFVGRADAAAGR 250
260 270 280 290 300 310 320 330 340 350 360 m904.pep
ADFAFAAXIFAGLVERDVVRQDQRAGRRDFQTAFDVFHACRVQLVDFAQQGFGGDDNART
||||||| |:|||||||:||||||||||||||||||||||||||||||||||||||||| a904
ADFAFAARCFSGLVERDVIRQDQRAGRRDFQTAFDVFHACRVQLVDFAQQGFGGDDNART 310
320 330 340 350 360 370 380 390 400 410 420 m904.pep
DEAVQTFMQDAARNQAQNGFFAADNQGMARIVAALEAHHAAGFFRQPVNDFTFTLVAPLC
||||||||||||||||||||||||||||:|||||||||||:||||||||||||||||||| a904
DEAVQTFMQDAARNQAQNGFFAADNQGMTRIVAALEAHHASGFFRQPVNDFTFTLVAPLC 370
380 390 400 410 420 430 m904.pep ADXYNIFSHSHITYRYX || ||||||||||
||| a904 ADYYNIFSHSHITXRYX 430
[0432] g906.seq not found yet
[0433] g906.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2727>:
TABLE-US-03206 m906.seq 1 ATGAAATATA TCGTATCAAT CTCTCTGGCT
ATGGGATTGG CTGCCTGTTC 51 GTTTGGGGGA TTTAAACCAA ATCCGTGGGA
CGCCGCGTCA TTTTGGGAAT 101 TGAAAAATTA CGCCAATCCC TATCCGGGAT
CAGCCTCGGC GGCACTTGAC 151 CAATATCCAT CGAAAGCAAG ACGAAGGCAA
CTGAAAGACA TGCAAGAGTG 201 CGGCTATGAC CCAATAGACG GCGGAAAGTC
TGAAGCAGAT GCCTGCCTGA 251 GGAAAAAAGG CTGGTGTCGT AAGGGTTTCG
ACCCTTATCC CGAAAACAAA 301 AAATACGAAT GGCCTCGAGA AGAAGGAAAA
ACAAAATGA
This corresponds to the amino acid sequence <SEQ ID 2728; ORF
906>:
TABLE-US-03207 m906.pep 1 MKYIVSISLA MGLAACSFGG FKPNPWDAAS
FWELKNYANP YPGSASAALD 51 QYPSKARRRQ LKDMQECGYD PIDGGKSEAD
ACLRKKGWCR KGFDPYPENK 101 KYEWPREEGK TK*
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2729>:
TABLE-US-03208 g907.seq (partial) 1 ATGAAAAAAC CGACCGATAC
CCTACCCGTC AATCTgcaAC GCCGCCGCCT 51 GCTGTGTGCC GCCGGCGCGC
TGTTGATCAG CCCGCTGGCG CACGCCGGCG 101 CGCAACGTGA AGAAACGCtt
gCCGACGATG TGGCTTCCGT GATGAGGAGT 151 TCTGTCGGCA GCGTCAATCC
GCCGAGGCTG GTGTTCGACA ATCCGAAAGA 201 GGGCGAACGT TGGTTGTCCG
CGATGTCGGC ACGTTTGGCA AGATTCGTCC 251 CCGACGAGGG GGAGCGGCGC
AGGCTGCTGG TCAATATCCA ATACGAAAGC 301 AGCCGGGCCG GTTTGGATAC
GCAGATTGTG TTGGGGCTGa ttgaagtgga 351 aagcgggtac cgagctcgaa
tcatatca..
This corresponds to the amino acid sequence <SEQ ID 2730; ORF
907.ng>:
TABLE-US-03209 g907.pep (partial) 1 MKKPTDTLPV NLQRRRLLCA
AGALLISPLA HAGAQREETL ADDVASVMRS 51 SVGSVNPPRL VFDNPKEGER
WLSAMSARLA RFVPDEGERR RLLVNIQYES 101 SRAGLDTQIV LGLIEVESGY
RARIIS...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2731>:
TABLE-US-03210 m907.seq 1 ATGAGAAAAC CGACCGATAC CCTACCCGTT
AATCTGCAAC GCCGCCGCCT 51 GTTGTGTGCC GCCGGTGCGT TGTTGCTCAG
TCCTCTGGCG CACGCCGGCG 101 CGCAACGTGA GGAAACGCTT GCCGACGATG
TGGCTTCCGT GATGAGGAGT 151 TCTGTCGGCA GCGTCAATCC GCCGAGGCTG
GTGTTTGACA ATCCGAAAGA 201 GGGCGAGCGT TGGTTGTCTG CCATGTCGGC
ACGTTTGGCA AGGTTCGTCC 251 CCGAGGAGGA GGAGCGGCGC AGGCTGCTGG
TCAATATCCA GTACGAAAGC 301 AGCCGGGCCG GTTTGGATAC GCAGATTGTG
TTGGGGCTGA TTGAGGTGGA 351 AAGCGCGTTC CGCCAGTATG CAATCAGCGG
TGTCGGCGCG CGCGGCCTGA 401 TGCAGGTTAT GCCGTTkTGG AAAAACTACA
TCGGCAAACC GGCGCACAAC 451 CTGTTCGACA TCCGCACCAA CCTGCGTTAC
GGCTGTACCA TCCTGCGCCA 501 TTACCGGAAT CTTGAAAAAG GCAACATCGT
CCGCGCGCTT GCCCGCTTTA 551 ACGGCAGCTT GGGCAGCAAT AAATATCCGA
ACGCCGTTTT GGgCGCGTGG 601 CGCAACCGCT GGCAGTGGCG TTGA
This corresponds to the amino acid sequence <SEQ ID 2732; ORF
907>:
TABLE-US-03211 m907.pep 1 MRKPTDTLPV NLQRRRLLCA AGALLLSPLA
HAGAQREETL ADDVASVMRS 51 SVGSVNPPRL VFDNPKEGER WLSAMSARLA
RFVPEEEERR RLLVNIQYES 101 SRAGLDTQIV LGLIEVESAF RQYAISGVGA
RGLMQVMPXW KNYIGKPAHN 151 LFDIRTNLRY GCTILRHYRN LEKGNIVRAL
ARFNGSLGSN KYPNAVLGAW 201 RNRWQWR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 907
shows 92.9% identity over a 126 aa overlap with a predicted ORF
(ORF 907.ng) from N. gonorrhoeae:
TABLE-US-03212 g907/m907 10 20 30 40 50 60 g907.pep
MKKPTDTLPVNLQRRRLLCAAGALLISPLAHAGAQREETLADDVASVMRSSVGSVNPPRL
|:|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| m907
MRKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDVASVMRSSVGSVNPPRL 10 20
30 40 50 60 70 80 90 100 110 120 g907.pep
VFDNPKEGERWLSAMSARLARFVPDEGERRRLLVNIQYESSRAGLDTQIVLGLIEVESGY
||||||||||||||||||||||||:| |||||||||||||||||||||||||||||||: : m907
VFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSRAGLDTQIVLGLIEVESAF 70 80
90 100 110 120 g907.pep RARIIS | || m907
RQYAISGVGARGLMQVMPXWKNYIGKPAHNLFDIRTNLRYGCTILRHYRNLEKGNIVRAL 130
140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2733>:
TABLE-US-03213 a907.seq 1 ATGAAAAAAC CGACCGATAC CCTACCCGTC
AATCTGCAAC GCCGCCGCCT 51 ATTGTGTGCT GCCGGCGCGC TGTTGCTCAG
CCCGCTGGCA CAAGCCGGCG 101 CGCAACGTGA AGAAACGCTT GCCGACGATG
TGGCTTCCGT GATGAGGAGC 151 TCTGTCGGCA GCATAAATCC GCCGAGGCTG
GTGTTCGACA ATCCGAAAGA 201 GGGCGAGCGT TGGCTGTCCG CGATGTCTGC
TCGGTTGGCA AGGTTCGTCC 251 CCGATGAGGA GGAGCGGCGC AGGCTGCTGG
TCAATATCCA GTACGAAAGC 301 AGCCGGGCCG GTTTGGATAC GCAGATTGTG
TTGGGGCTGA TTGAGGTGGA 351 AAGCGCGTTC CGCCAGTATG CAATCAGCGG
TGTCGGCGCG CGCGGCCTGA 401 TGCAGGTTAT GCCGTTTTGG AAAAACTACA
TCGGCAAACC GGCGCACAAC 451 CTGTTCGACA TCCGCACCAA CCTGCGTTAC
GGCTGTACCA TCCTGCGCCA 501 TTACCGGAAT CTTGAAAAAG GCAACATCGT
CCGCGCACTC GCCCGTTTTA 551 ACGGTAGCCT CGGCAGCAAT AAATATCCGA
ACGCCGTTTT GGGCGCGTGG 601 CGCAACCGCT GGCAGTGGCG TTGA
This corresponds to the amino acid sequence <SEQ ID 2734; ORF
907.a>:
TABLE-US-03214 a907.pep 1 MKKPTDTLPV NLQRRRLLCA AGALLLSPLA
QAGAQREETL ADDVASVMRS 51 SVGSINPPRL VFDNPKEGER WLSAMSARLA
RFVPDEEERR RLLVNIQYES 101 SRAGLDTQIV LGLIEVESAF RQYAISGVGA
RGLMQVMPFW KNYIGKPAHN 151 LFDIRTNLRY GCTILRHYRN LEKGNIVRAL
ARFNGSLGSN KYPNAVLGAW 201 RNRWQWR* m907/a907 97.6% identity in 207
aa overlap 10 20 30 40 50 60 m907.pep
MRKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDVASVMRSSVGSVNPPRL
|:||||||||||||||||||||||||||||:|||||||||||||||||||||||:||||| a907
MKKPTDTLPVNLQRRRLLCAAGALLLSPLAQAGAQREETLADDVASVMRSSVGSINPPRL 10 20
30 40 50 60 70 80 90 100 110 120 m907.pep
VFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSRAGLDTQIVLGLIEVESAF
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| a907
VFDNPKEGERWLSAMSARLARFVPDEEERRRLLVNIQYESSRAGLDTQIVLGLIEVESAF 70 80
90 100 110 120 130 140 150 160 170 180 m907.pep
RQYAISGVGARGLMQVMPXWKNYIGKPAHNLFDIRTNLRYGCTILRHYRNLEKGNIVRAL
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| a907
RQYAISGVGARGLMQVMPFW KNYIGKPAHNLFDIRTNLRYGCTILRHYRNLEKGNIVRAL 130
140 150 160 170 180 190 200 m907.pep ARFNGSLGSNKYPNAVLGAWRNRWQWRX
|||||||||||||||||||||||||||| a907 ARFNGSLGSNKYPNAVLGAWRNRWQWRX 190
200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2735>:
TABLE-US-03215 g908.seq 1 ATGAG.AAAA GCCGTCTAAG CCGGTATAAA
CAAAATAAAC TCATTGGGCT 51 ATTTGTCGCA GGTGTAACTG CAAGAACAGC
GGCAGAGTTG GTAGGCATTA 101 ATAAAAATAC CGCAGCCTAT GATTTTCATC
GTTTACGATG ACTGATTTAT 151 CAAAACGGTC CGCATTTAGA AATGTTTGAT
GGCGAAGTAG AAGCAGATGA 201 AAGTTATTTT GGCGGACAAC GCAAAGGCAA
ACGCGGTCGC GGTGCTGCCG 251 GTAAAGTCGC CGTATTCGGT CTTTTGAAGC
GAAATGGTAA GGTTTATACG 301 GTTACAGTAC CGAATACTCA AACCGCTACT
TTATTTCCTA TTATCCGTGA 351 acaagtgaaa cctgacagta ttgtttatac
ggattgttat CgTAGCTATG 401 ATGTATTAGA Tgtgagcgaa tttagccatT
TTagcttcgc tgaaacttcg 451 ttttcgtaTC AATCACAGCA CACATTTTGC
CGAACGACAA AACCATATTA 501 A
This corresponds to the amino acid sequence <SEQ ID 2736; ORF
908.ng>:
TABLE-US-03216 g908.pep 1 MXKSRLSRYK QNKLIGLFVA GVTARTAAEL
VGINKNTAAY DFHRLR*LIY 51 QNGPHLEMFD GEVEADESYF GGQRKGKRGR
GAAGKVAVFG LLKRNGKVYT 101 VTVPNTQTAT LFPIIREQVK PDSIVYTDCY
RSYDVLDVSE FSHFSFAETS 151 FSYQSQHTFC RTTKPY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2737>:
TABLE-US-03217 m908.seq 1 ATGAGAAAAA GTCGTCTAAG CCAGTATAAA
CAAAmTAAAC TCATTGAACT 51 GTTTGTCACA GGTGTAACTG CAAGAACGGC
AGCAGAGTTA GTAGGCGTTA 101 ATAAAAATAC CGCAGCCTAT TATTTTCATC
GTTTACGATT ACTTATTTAT 151 CAAAACAGTC CGCATTTGGA AATGTTTGAT
GGCGAAGTAG AAGCAGATGA 201 AAGTTATTTT GGCGGACAAC GCAAAGGCAA
ACGCGGTCGC GGTGCTGCCG 251 GTAAAGTCGC CGTATTCGGT CTTTTGAAGC
GAAATGGTAA GGTTTATACG 301 GTTACAGTAC CGAATACTCA AACCGCTACT
TTATTTCCTA TTATCCGTGA 351 ACAAGTGAAA CCTGACAGCA TTTTTTATAC
GGATTGTTAT CGTAGCTATG 401 ATGTATTAGA TGTGCGCGAA TTTAGCCATT
TTAGCTTCGC TGAAACTTCG 451 TTTTCGTATC AATCACAGCA CACATTTTGC
CGAACGACAA AACCATATTA 501 A
This corresponds to the amino acid sequence <SEQ ID 2738; ORF
908>:
TABLE-US-03218 m908.pep 1 MRKSRLSQYK QXKLIELFVT GVTARTAAEL
VGVNKNTAAY YFHRLRLLIY 51 QNSPHLEMFD GEVEADESYF GGQRKGKRGR
GAAGKVAVFG LLKRNGKVYT 101 VTVPNTQTAT LFPIIREQVK PDSIFYTDCY
RSYDVLDVRE FSHFSFAETS 151 FSYQSQHTFC RTTKPY*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 908
shows 93.4% identity over a 166 aa overlap with a predicted ORF
(ORF 908.ng) from N. gonorrhoeae:
TABLE-US-03219 908/m908 10 20 30 40 50 60 g908.pep
MXKSRLSRYKQNKLIGLFVAGVTARTAAELVGINKNTAAYDFHRLRXLIYQNGPHLEMFD |10
|||||:||| ||| |||:||||||||||||:||||||| ||||| |||||:||||||| m908
MRKSRLSQYKQXKLIELFVTGVTARTAAELVGVNKNTAAYYFHRLRLLIYQNSPHLEMFD 10 20
30 40 50 60 70 80 90 100 110 120 g908.pep
GEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYTVTVPNTQTATLFPIIREQVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m908
GEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYTVTVPNTQTATLFPIIREQVK 70 80
90 100 110 120 130 140 150 160 g908.pep
PDSIVYTDCYRSYDVLDVSEFSHFSFAETSFSYQSQHTFCRTTKPYX |||| |||||||||||||
|||||||||||||||||||||||||||| m908
PDSIFYTDCYRSYDVLDVREFSHFSFAETSFSYQSQHTFCRTTKPYX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2739>:
TABLE-US-03220 a908.seq 1 ATGAGAAAAA GTCGTCTAAG CCAGTATAAA
CAAAATAAAC TCATTGAGCT 51 ATTTGTCGCA GGTGTAACTG CAAGAACGGC
AGCAGAGTTA GTAGGCGTTA 101 ATAAAAATAC CGCAGCCTAT TATTTTCATC
GTTTACGATT ACTTATTTAT 151 CAAAACAGTC CGCATTTGGA AATGTTTGAT
GGCGAAGTAG AAGCAGATGA 201 AAGTTATTTT GGCGGACAAC GCAAAGGCAA
ACGCGGTCGC GGTGCTGCCG 251 GTAAAGTCGC CGTATTCGGT CTTTTGAAGC
GAAATGGTAA GGTTTATACG 301 GTTACAGTAC CGAATACTCA AACCGCTACT
TTATTTCCTA TTATCCGTGA 351 ACAAGTGAAA CCTGACAGCA TTGTTTATAC
GGATTGTTAT CGTAGCTATG 401 ATGTATTAGA TGTGCGCGAA TTTAGCCATT
TTAGCTTCGC TGAAACTTCG 451 TTTTCGTATC AATCACAGCA CACATTTTGC
CGAACGACAA AACCATATTA 501 A
This corresponds to the amino acid sequence <SEQ ID 2740; ORF
908.a>:
TABLE-US-03221 a908.pep 1 MRKSRLSQYK QNKLIELFVA GVTARTAAEL
VGVNKNTAAY YFHRLRLLIY 51 QNSPHLEMFD GEVEADESYF GGQRKGKRGR
GAAGKVAVFG LLKRNGKVYT 101 VTVPNTQTAT LFPIIREQVK PDSIVYTDCY
RSYDVLDVRE FSHFSFAETS 151 FSYQSQHTFC RTTKPY* m908/a908 98.2%
identity in 166 aa overlap 10 20 30 40 50 60 m908.pep
MRKSRLSQYKQXKLIELFVTGVTARTAAELVGVNKNTAAYYFHRLRLLIYQNSPHLEMFD
||||||||||| |||||||:|||||||||||||||||||||||||||||||||||||||| a908
MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHRLRLLIYQNSPHLEMFD 10 20
30 40 50 60 70 80 90 100 110 120 m908.pep
GEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYTVTVPNTQTATLFPIIREQVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a908
GEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYTVTVPNTQTATLFPIIREQVK 70 80
90 100 110 120 130 140 150 160 m908.pep
PDSIFYTDCYRSYDVLDVREFSHFSFAETSFSYQSQHTFCRTTKPYX ||||
|||||||||||||||||||||||||||||||||||||||||| a908
PDSIVYTDCYRSYDVLDVREFSHFSFAETSFSYQSQHTFCRTTKPYX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2741>:
TABLE-US-03222 g909.seq (partial) 1 atgcgtaaaa ccgtacttat
cCTgaccatc tccgccgccc ttttgtcggg 51 ctgcacatgG gaaacttatc
aagacggcag cggcaaaacc gccgtccgtg 101 caaaatgttc caccggcacg
ccgctgtgtt ggcaagacgg gcgcggctcg 151 aaaaaggtgg actgcgacga
gtacggtggc gaacgccggg ccgtgttgcg 201 caaccaaaag cgggggaagc
ccgcgacgag gagagccgca acgctgggga 251 aaccgagttt ccgggcgagg
gacggggggg ggcgggtgaa cagggcagaa 301 acgggggagg ggaagcgatc
ggcgagg..
This corresponds to the amino acid sequence <SEQ ID 2742; ORF
909.ng>:
TABLE-US-03223 g909.pep (partial) 1 MRKTVLILTI SAALLSGCTW
ETYQDGSGKT AVRAKCSTGT PLCWQDGRGS 51 KKVDCDEYGG ERRAVLRNQK
RGKPATRRAA TLGKPSFRAR DGGGRVNRAE 101 TGEGKRSAR..
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2743>:
TABLE-US-03224 m909.seq 1 ATGCGTAAAA CCTTCCTCTT CCTGACCGCT
GCCGCCGCCC TTTTGTCGGG 51 CTGCGCGTGG GAAACTTATC AAGACGGCAA
CGGCAAGACC GCCGTCCGTC 101 AAAAATATCC CGCCGGCACG CCCGTTTATT
ACCAAGACGG CAGCTACTCG 151 AAAAATATGA ACTACAACCA ATACCGTCCC
GAACGCCATG CCGTGTTACC 201 CAATCAAACC GGCAACAACG CCGACGAAGA
GCATCGCCAA CACTGGCAAA 251 AACCAAAGTT TCAAAACCGA TAA
This corresponds to the amino acid sequence <SEQ ID 2744; ORF
909>:
TABLE-US-03225 m909.pep 1 MRKTFLFLTA AAALLSGCAW ETYQDGNGKT
AVRQKYPAGT PVYYQDGSYS 51 KNMNYNQYRP ERHAVLPNQT GNNADEEHRQ
HWQKPKFQNR *
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 909
shows 53.3% identity over a 90 aa overlap with a predicted ORF (ORF
909.ng) from N. gonorrhoeae:
TABLE-US-03226 m909/g909 10 20 30 40 50 60 m909.pep
MRKTFLFLTAAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYYQDGSYSKNMNYNQYRP ||||
|:|| :|||||||:|||||||:|||||| | :|||: :||| ||::: ::| g909
MRKTVLILTISAALLSGCTWETYQDGSGKTAVRAKCSTGTPLCWQDGRGSKKVDCDEYGG 10 20
30 40 50 60 70 80 90 m909.pep ERHAVLPNQTGNNADEEHRQHWQKPKFQNRX
||:||| || :: :: ||:|: | g909
ERRAVLRNQKRGKPATRRAATLGKPSFRARDGGGRVNRAETGEGKRSAR 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2745>:
TABLE-US-03227 a909.seq 1 ATGCGTAAAA CCTTCCTTAT CCTGATGACT
GCCGCCGCCC TTTTGTCGGG 51 CTGCGCGTGG GAAACTTATC AAGACGGCAA
CGGCAAGACC GCCGTCCGTC 101 AAAAATATCC CGCCGGCACG CCCGTTTATT
ACCAAGACGG CAGCTACTCG 151 AAAAATATGA ACTACAACCA ATACCGTCCC
GAACGCCATG CCGTGTTACC 201 CAACCAAACC GGCAACAACG CCGACGAAGA
GCATCGCCAA CACTGGCAAA 251 AGCCCAAATT TCAAAACCGA TAA
This corresponds to the amino acid sequence <SEQ ID 2746; ORF
909.a>:
TABLE-US-03228 a909.pep 1 MRKTFLILMT AAALLSGCAW ETYQDGNGKT
AVRQKYPAGT PVYYQDGSYS 51 KNMNYNQYRP ERHAVLPNQT GNNADEEHRQ
HWQKPKFQNR * m909/a909 96.7% identity in 90 aa overlap 10 20 30 40
50 60 m909.pep
MRKTFLFLTAAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYYQDGSYSKNMNYNQYRP
||||||:| :|||||||||||||||||||||||||||||||||||||||||||||||||| a909
MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYYQDGSYSKNMNYNQYRP 10 20
30 40 50 60 70 80 90 m909.pep ERHAVLPNQTGNNADEEHRQHWQKPKFQNRX
||||||||||||||||||||||||||||||| a909
ERHAVLPNQTGNNADEEHRQHWQKPKFQNRX 70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2747>:
TABLE-US-03229 g910.seq 1 ATGAAAAAAC TGTTATTGGC CGCCGTTGTT
TCCCTAAATG CCGCAACCGC 51 ATTTGCCGGC GACTCTGCCG AGCGTCAGAT
TTACGGCGAT CCCCATTTTG 101 AACAAAACCG CACAAAAGCC GTGAAAATGT
TGGAACAGCG CGGTTATCAG 151 GTTTACGATG TCGATGCCGA CGACTACTGG
GGCAAACCTG TTTTGGAAGT 201 GGAAGCCTAT AAAGACGGCC GCGAATACGA
CATCGTGTTG TCTTACCCCG 251 ACCTGAAAAT CATCAAAGAG CAGCTCGATC
GCTGA
This corresponds to the amino acid sequence <SEQ ID 2748; ORF
910.ng>:
TABLE-US-03230 g910.pep 1 MKKLLLAAVV SLNAATAFAG DSAERQIYGD
PHFEQNRTKA VKMLEQRGYQ 51 VYDVDADDYW GKPVLEVEAY KDGREYDIVL
SYPDLKIIKE QLDR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2749>:
TABLE-US-03231 m910.seq 1 ATGAAAAAAC TGTTATTGGC TGCCGTTGTT
TCTCTGAGTG CCGCTGCCGC 51 ATTTGCCGGC GACTCTGCCG AGCGTCAGAT
TTACGGCGAT CCCCATTTTG 101 AACAAAACCG CACAAAAGCT GTGAAAATGT
TGGAGCAGCG CGGTTATCAG 151 GTTTACGATG TCGATGCCGA CGACCATTGG
GGTAAGCCTG TGCTGGAAGT 201 GGAAGCCTAT AAAGACGGCC GCGAATACGA
CATCGTGTTG TCTTACCCCG 251 ACCTGAAAAT CATCAAAGAG CAGCTCGATC
GCTGA
This corresponds to the amino acid sequence <SEQ ID 2750; ORF
910>:
TABLE-US-03232 m910.pep 1 MKKLLLAAVV SLSAAAAFAG DSAERQIYGD
PHFEQNRTKA VKMLEQRGYQ 51 VYDVDADDHW GKPVLEVEAY KDGREYDIVL
SYPDLKIIKE QLDR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 910
shows 96.8% identity over a 94 aa overlap with a predicted ORF (ORF
910.ng) from N. gonorrhoeae:
TABLE-US-03233 g910/m910 10 20 30 40 50 60 g910.pep
MKKLLLAAVVSLNAATAFAGDSAERQIYGDPHFEQNRTKAVKMLEQRGYQVYDVDADDYW
||||||||||||:||:||||||||||||||||||||||||||||||||||||||||||:| m910
MKKLLLAAVVSLSAAAAFAGDSAERQIYGDPHFEQNRTKAVKMLEQRGYQVYDVDADDHW 10 20
30 40 50 60 70 80 90 g910.pep GKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDRX
||||||||||||||||||||||||||||||||||| m910
GKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDRX 70 80 90
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2751>:
TABLE-US-03234 a910.seq 1 ATGAAAAAAC TGTTATTGGT CGCCGTTGTT
TCCTTGAGTG CCGCAACCGC 51 ATTTGCCGGC GACTCTGCCG AGCGTCAGAT
TTACGGCGAT CCCTATTTTG 101 AACAAAACCG CACAAAAGCC GTGAAAATGT
TGGAACAGCG CGGTTATCAG 151 GTTCACGATG TCGATGCCGA CGACCATTGG
GGCAAACCTG TTTTGGAAGT 201 GGAAGCCTAT AAAGACGGCC GCGAATACGA
CATTGTGTTG TCTTACCCCG 251 ACCTGAAAAT CATCAAAGAG CAGCTCGATC
GCTGA
This corresponds to the amino acid sequence <SEQ ID 2752; ORF
910.a>:
TABLE-US-03235 a910.pep 1 MKKLLLVAVV SLSAATAFAG DSAERQIYGD
PYFEQNRTKA VKMLEQRGYQ 51 VHDVDADDHW GKPVLEVEAY KDGREYDIVL
SYPDLKIIKE QLDR* m910/a910 95.7% identity in 94 aa overlap 10 20 30
40 50 60 m910.pep
MKKLLLAAVVSLSAAAAFAGDSAERQIYGDPHFEQNRTKAVKMLEQRGYQVYDVDADDHW
||||||:||||||||:|||||||||||||||:|||||||||||||||||||:|||||||| a910
MKKLLLVAVVSLSAATAFAGDSAERQIYGDPYFEQNRTKAVKMLEQRGYQVHDVDADDHW 10 20
30 40 50 60 70 80 90 m910.pep GKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDRX
||||||||||||||||||||||||||||||||||| a910
GKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDRX 70 80 90
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2753>:
TABLE-US-03236 g911.seq 1 ATGAAAAAGA ACATATTGGA ATTTTGGGTC
GGACTGTTCG TCTTGATCGG 51 CGCGGCGGCG GTTGCCTTTC TCGCTTTCCG
CGTGGCGGGC GGCGCGGCGT 101 TCGGCGGTTC GGACAAAACT TACGCCGTTT
ATGCCGATTT CGGCGACATC 151 GGCGGTTTGA AGGTCAATGC CCCCGTCAAA
TCCGCAGGCG TATTGGTCGG 201 GCGCGTCGGC GCTATCGGGC TTGACCCGAA
ATCCTATCAG GCGAGGGTGC 251 GCCTTGATTT GGACGGCAAG TATCAGTTCA
GCAGTGACGT TTCCGCGCAA 301 ATCCTGACTT CGGGACTTTT GGGCGAACAG
TACATCGGGC TGCAGCAGGG 351 CGGCGATACG GAAAACCTTG CTGCCGGCGA
CACCATCTCC GTAACCAGTT 401 CTGCAATGGT TCTGGAAAAC CTGATCGGTA
AATTCATGAC CAGCTTCGCC 451 GAGAAAAACG CTGAGGGCGG CAATGCGGAA
AAAGCCGcag aAtaa
This corresponds to the amino acid sequence <SEQ ID 2754; ORF
911.ng>:
TABLE-US-03237 g911.pep 1 MKKNILEFWV GLFVLIGAAA VAFLAFRVAG
GAAFGGSDKT YAVYADFGDI 51 GGLKVNAPVK SAGVLVGRVG AIGLDPKSYQ
ARVRLDLDGK YQFSSDVSAQ 101 ILTSGLLGEQ YIGLQQGGDT ENLAAGDTIS
VTSSAMVLEN LIGKFMTSFA 151 EKNAEGGNAE KAAE*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2755>:
TABLE-US-03238 m911.seq 1 ATGAAGAAGA ACATATTGGA ATTTTGGGTC
GGACTGTTCG TCCTGATTGG 51 CGCGGCGGCG GTTGCCTTTC TCGCTTTCCG
CGTGGCCGGC GGTGCGGCGT 101 TCGGCGGTTC GGACAAAACT TACGCCGTTT
ATGCCGATTT CGGCGACATC 151 GGCGGTTTGA AGGTCAATGC CCCCGTCAAA
TCCGCAGGCG TATTGGTCGG 201 GCGCGTCGGC GCTATCGGAC TTGACCCGAA
ATCCTATCAG GCGAGGGTGC 251 GCCTCGATTT GGACGGCAAG TATCAGTTCA
GCAGCGACGT TTCCGCGCAA 301 ATCCTGACTT CGGGACTTTT GGGCGAGCAG
TACATCGGGC TGCAGCAGGG 351 CGGCGACACG GAAAACCTTG CTGCCGGCGA
CACCATCTCC GTAACCAGTT 401 CTGCAATGGT TCTGGAAAAC CTTATCGGCA
AATTCATGAC GAGTTTTGCC 451 GAGAAAAATG CCGACGGCGG CAATGCGGAA
AAAGCCGCCG AATAA
This corresponds to the amino acid sequence <SEQ ID 2756; ORF
911>:
TABLE-US-03239 m911.pep 1 MKKNILEFWV GLFVLIGAAA VAFLAFRVAG
GAAFGGSDKT YAVYADFGDI 51 GGLKVNAPVK SAGVLVGRVG AIGLDPKSYQ
ARVRLDLDGK YQFSSDVSAQ 101 ILTSGLLGEQ YIGLQQGGDT ENLAAGDTIS
VTSSAMVLEN LIGKFMTSFA 151 EKNADGGNAE KAAE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 911
shows 99.4% identity over a 164 aa overlap with a predicted ORF
(ORF 911.ng) from N. gonorrhoeae:
TABLE-US-03240 g911/m911 10 20 30 40 50 60 g911.pep
MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m911
MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 10 20
30 40 50 60 70 80 90 100 110 120 g911.pep
SAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQGGDT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m911
SAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQGGDT 70 80
90 100 110 120 130 140 150 160 g911.pep
ENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNAEGGNAEKAAEX
||||||||||||||||||||||||||||||||||:|||||||||| m911
ENLAAGDTISVISSAMVLENLIGKFMTSFAEKNADGGNAEKAAEX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2757>:
TABLE-US-03241 a911.seq 1 ATGAAAAAGA ACATATTGGA ATTTTGGGTC
GGACTGTTCG TCCTGATTGG 51 CGCGGCGGCG GTTGCCTTTC TCGCTTTCCG
CGTGGCCGGC GGTGCGGCGT 101 TCGGCGGTTC GGACAAAACT TACGCCGTTT
ATGCCGATTT CGGCGACATC 151 GGCGGTTTGA AGGTCAATGC CCCCGTCAAA
TCCGCAGGCG TATTGGTCGG 201 GCGCGTCGGC GCTATCGGAC TTGACCCGAA
ATCCTATCAG GCGAGGGTGC 251 GCCTCGATTT GGACGGCAAG TATCAGTTCA
GCAGCGACGT TTCCGCGCAA 301 ATCCTGACTT CGGGACTTTT GGGCGAGCAG
TACATCGGGC TGCAGCAGGG 351 CGGCGACACG GAAAACCTTG CTGCCGGCGA
CACCATCTCC GTAACCAGTT 401 CTGCAATGGT TCTGGAAAAC CTTATCGGCA
AATTCATGAC GAGTTTTGCC 451 GAGAAAAATG CCGACGGCGG CAATGCGGAA
AAAGCCGCCG AATAA
This corresponds to the amino acid sequence <SEQ ID 2758; ORF
911.a>:
TABLE-US-03242 a911.pep 1 MKKNILEFWV GLFVLIGAAA VAFLAFRVAG
GAAFGGSDKT YAVYADFGDI 51 GGLKVNAPVK SAGVLVGRVG AIGLDPKSYQ
ARVRLDLDGK YQFSSDVSAQ 101 ILTSGLLGEQ YIGLQQGGDT ENLAAGDTIS
VTSSAMVLEN LIGKFMTSFA 151 EKNADGGNAE KAAE* m911/a911 100.0%
identity in 164 aa overlap 10 20 30 40 50 60 m911.pep
MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a911
MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 10 20
30 40 50 60 70 80 90 100 110 120 m911.pep
SAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQGGDT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a911
SAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQGGDT 70 80
90 100 110 120 130 140 150 160 m911.pep
ENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAEKAAEX
||||||||||||||||||||||||||||||||||||||||||||| a911
ENLAAGDTISVISSAMVLENLIGKFMTSFAEKNADGGNAEKAAEX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2759>:
TABLE-US-03243 g912.seq 1 gtgAAAAaat cctcctTcat cagcGCATTG
GGCATCGgtA TTTTGAGCAT 51 CGGCATGGCA TTTGCCTCCC CGGCCGACGC
AGTGGGACAA ATCCGCCAAA 101 ACGCCACACA GGTTTTGACC ATCCTCAAAA
GCGGCGACGC GGCTTCTGCA 151 CGCCCAAAAG CCGAAGCCTA TGCGGTTCCC
TATTTCGATT TCCAACGTAT 201 GACCGCATTG GCGGTCGGCA ACCCTTGGCG
TACCGCGTCC GACGCGCAAA 251 AACAAGCGTT GGCCAAAGAA TTTCAAACCC
TGCTGATCCG CACCTATTCC 301 GGCACGATGC TGAAATTCAA AAACGCGACC
GTCAACGTCA AAGACAATCC 351 CATCGTCAAT AAGGGCGGCA AGGAAATCGT
CGTCCGTGCC GAAGTCGGCA 401 TCCCCGGTCA GAAGCCCGTC AATATGGACT
TTACCACCTA CCAAAGCGGC 451 GGCAAATACC GTACCTACAA CGTCGCCATC
GAAGGCACGA GCCTGGTTAC 501 CGTGTACCGC AACCAATTCG GCGAAATCAT
CAAAGCCAAA GGCATCGACG 551 GGCTGATTGC CGAGTTGAAA GCCAAAAACG
GCGGCAAATA A
This corresponds to the amino acid sequence <SEQ ID 2760; ORF
912.ng>:
TABLE-US-03244 g912.pep 1 VKKSSFISAL GIGILSIGMA FASPADAVGQ
IRQNATQVLT ILKSGDAASA 51 RPKAEAYAVP YFDFQRMTAL AVGNPWRTAS
DAQKQALAKE FQTLLIRTYS 101 GTMLKFKNAT VNVKDNPIVN KGGKEIVVRA
EVGIPGQKPV NMDFTTYQSG 151 GKYRTYNVAI EGTSLVTVYR NQFGEIIKAK
GIDGLIAELK AKNGGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2761>:
TABLE-US-03245 m912.seq 1 ATGAAAAAAT CCTCCCTCAT CAGCGCATTG
GGCATCGGTA TTTTGAGCAT 51 CGGCATGGCA TTTGCCGCCC CTGCCGACGC
GGTAAGCCAA ATCCGTCAAA 101 ACGCCACTCA AGTATTGAGC ATCTTAAAAA
ACGGCGATGC CAACACCGCT 151 CGCCAAAAAG CCGAAGCCTA TGCGATTCCC
TATTTCGATT TCCAACGTAT 201 GACCGCATTG GCGGTCGGCA ACCCTTGGCG
CACCGCGTCC GACGCGCAAA 251 AACAAGCGTT GGCCAAAGAA TTTCAAACCC
TGCTGATCCG CACCTATTCC 301 GGCACGATGC TGAAATTAAA AAACGCCAAC
GTCAACGTCA AAGACAATCC 351 CATCGTCAAT AAAGGCGGCA AAGAAATCAT
CGTCCGCGCC GAAGTCGGCG 401 TACCCGGGCA AAAACCCGTC AACATGGACT
TCACCACCTA CCAAAGCGGC 451 GGTAAATACC GTACCTACAA CGTCGCCATC
GAAGGCGCGA GCCTGGTTAC 501 CGTGTACCGC AACCAATTCG GCGAAATTAT
CAAAGCGAAA GGCGTGGACG 551 GACTGATTGC CGAGTTGAAA GCCAAAAACG
GCGGCAAATA A
This corresponds to the amino acid sequence <SEQ ID 2762; ORF
912>:
TABLE-US-03246 m912.pep 1 MKKSSLISAL GIGILSIGMA FAAPADAVSQ
IRQNATQVLS ILKNGDANTA 51 RQKAEAYAIP YFDFQRMTAL AVGNPWRTAS
DAQKQALAKE FQTLLIRTYS 101 GTMLKLKNAN VNVKDNPIVN KGGKEIIVRA
EVGVPGQKPV NMDFTTYQSG 151 GKYRTYNVAI EGASLVTVYR NQFGEIIKAK
GVDGLIAELK AKNGGK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 912
shows 91.8% identity over a 196 aa overlap with a predicted ORF
(ORF 912.ng) from N. gonorrhoeae:
TABLE-US-03247 g912/m912 10 20 30 40 50 60 g912.pep
VKKSSFISALGIGILSIGMAFASPADAVGQIRQNATQVLTILKSGDAASARPKAEAYAVP
:||||:||||||||||||||||:|||||:||||||||||:|||:||| :|| ||||||:| m912
MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKNGDANTARQKAEAYAIP 10 20
30 40 50 60 70 80 90 100 110 120 g912.pep
YFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGTMLKFKNATVNVKDNPIVN
|||||||||||||||||||||||||||||||||||||||||||||:|||:|||||||||| m912
YFDFQRMTALAVGNPWRIASDAQKQALAKEFQTLLIRTYSGTMLKLKNANVNVKDNPIVN 70 80
90 100 110 120 130 140 150 160 170 180 g912.pep
KGGKEIVVRAEVGIPGQKPVNMDFTTYQSGGKYRTYNVAIEGTSLVTVYRNQFGEIIKAK
||||||:||||||:||||||||||||||||||||||||||||:||||||||||||||||| m912
KGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAIEGASLVTVYRNQFGEIIKAK 130
140 150 160 170 180 190 g912.pep GIDGLIAELKAKNGGKX
|:||||||||||||||| m912 GVDGLIAELKAKNGGKX 190
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2763>:
TABLE-US-03248 a912.seq 1 ATGAAAAAAT CCTCCTTCAT CAGCGCATTG
GGCATCGGTA TTTTGAGCAT 51 CGGCATGGCA TTTGCCGCCC CTGCCGACGC
GGTAAACCAA ATCCGTCAAA 101 ACGCCACTCA AGTATTGAGC ATCTTAAAAA
GCGGTGATGC CAACACCGCC 151 CGCCAAAAAG CCGAAGCCTA TGCGATTCCC
TATTTCGATT TCCAACGTAT 201 GACCGCATTG GCGGTCGGCA ACCCTTGGCG
CACCGCGTCC GACGCGCAAA 251 AACAAGCGTT GGCCAAAGAA TTTCAAACCC
TGCTGATCCG CACCTATTCC 301 GGCACGATGC TGAAATTAAA AAACGCCAAC
GTCAACGTCA AAGACAATCC 351 CATCGTCAAT AAAGGCGGCA AAGAAATCAT
CGTCCGCGCC GAAGTCGGCG 401 TACCCGGGCA AAAACCCGTC AACATGGACT
TCACCACCTA CCAAAGCGGC 451 GGTAAATACC GTACCTACAA CGTCGCCATC
GAAGGCGCGA GCCTGGTTAC 501 CGTGTACCGC AACCAATTCG GCGAAATTAT
CAAAGCGAAA GGCGTGGACG 551 GACTGATTGC CGAGTTGAAG GCTAAAAACG
GCAGCAAGTA A
This corresponds to the amino acid sequence <SEQ ID 2764; ORF
912.a>:
TABLE-US-03249 a912.pep 1 MKKSSFISAL GIGILSIGMA FAAPADAVNQ
IRQNATQVLS ILKSGDANTA 51 RQKAEAYAIP YFDFQRMTAL AVGNPWRTAS
DAQKQALAKE FQTLLIRTYS 101 GTMLKLKNAN VNVKDNPIVN KGGKEIIVRA
EVGVPGQKPV NMDFTTYQSG 151 GKYRTYNVAI EGASLVTVYR NQFGEIIKAK
GVDGLIAELK AKNGSK* m912/a912 98.0% identity in 196 aa overlap 10 20
30 40 50 60 m912.pep
MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKNGDANTARQKAEAYAIP
|||||:||||||||||||||||||||||:||||||||||||||:|||||||||||||||| a912
MKKSSFISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKSGDANTARQKAEAYAIP 10 20
30 40 50 60 70 80 90 100 110 120 m912.pep
YFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGTMLKLKNANVNVKDNPIVN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a912
YFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGTMLKLKNANVNVKDNPIVN 70 80
90 100 110 120 130 140 150 160 170 180 m912.pep
KGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAIEGASLVTVYRNQFGEIIKAK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a912
KGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAIEGASLVTVYRNQFGEIIKAK 130
140 150 160 170 180 190 m912.pep GVDGLIAELKAKNGGKX
||||||||||||||:|| a912 GVDGLIAELKAKNGSKX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2765>:
TABLE-US-03250 g913.seq 1 atGAAAAAAA CCGCCTACGC CATCCTCCTG
CTGATCGGGT TCGCTTCCGC 51 CCCTGCATTT GCAGAAACCC GCCCCGCCGA
CCCTTATGAA GGCTACAACC 101 GCGCCGTTTC CAAATTCAAC GACCAAGCCG
ACCGCTACAT TTTCGCCCCT 151 GCCGCGCGCG GCTACCGCAA AGTTACGCCG
AAACCCGTCC GCGCCGGCGT 201 GTCCAATTTT TTTAACAACC TGCGCGACGT
GGTCAGTTTC GGCAGCAATA 251 TCTTGCGTTT GGAcatCAAA cgcgcAAGcg
aAGACCtcgT CCGcgtcggc 301 atCAATACCA CCTTCGGTTT GGgcgGGCTC
ATTGATATTG CCGGcgcGGg 351 cggcgttccc gacaataaaa AcacTttgGg
cgacacgttt gcctcgtGGG 401 GctgGAAAaa cagcaATTAT TTCGTgttgc
CCGtcttagg cccgtccacc 451 gtccgcgacg cgctcggcac gggcattacc
tCTGTTTATC CGCccaagaa 501 tatcgttttc catacccctg ccggacgctg
GGgcacgact gCCGCTGCCG 551 CCGTcagtac gcgcgaaggc ctcctcgatt
tgaccgacag TCtggacgaa 601 gccgccatCG ACAAATACAG CTACACGCGc
gacctctata tgAAAGTCCG 651 CGcacgGCag AccgGTGCAA CACCTGCCGA
AGgtacggaa gataacatcg 701 acatcgacat cgACGAATTG GTCGAAAGTG
CCGAAACCGG CGCGGCAGAG 751 CCCGCCGTTC ACGAAGATTC CGTATCCGAA
ACACAGGCAG AAGCAGCAGG 801 GGAAGCCGAA ACGCAACCTG GAACACAACC CTAA
This corresponds to the amino acid sequence <SEQ ID 2766; ORF
913.ng>:
TABLE-US-03251 g913.pep 1 MKKTAYAILL LIGFASAPAF AETRPADPYE
GYNRAVSKFN DQADRYIFAP 51 AARGYRKVTP KPVRAGVSNF FNNLRDVVSF
GSNILRLDIK RASEDLVRVG 101 INTTFGLGGL IDIAGAGGVP DNKNTLGDTF
ASWGWKNSNY FVLPVLGPST 151 VRDALGTGIT SVYPPKNIVF HTPAGRWGTT
AAAAVSTREG LLDLTDSLDE 201 AAIDKYSYTR DLYMKVRARQ TGATPAEGTE
DNIDIDIDEL VESAETGAAE 251 PAVHEDSVSE TQAEAAGEAE TQPGTQP*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2767>:
TABLE-US-03252 m913.seq 1 ATGAAAAAAA CCGCCTATGC CTTCCTCCTG
CTGATCGGGT TCGCTTCCGC 51 CCCTGCATTT GCCGAAACCC GCCCCGCCGA
CCCTTATGAA GGCTACAACC 101 GCGCCGTTTT CAAATTCAAC GACCAAGCCG
ACCGCTACAT TTTCGCCCCT 151 GCCGCGCGCG GCTACCGCAA AGTTGCGCCG
AAACCCGTCC GCGCCGGCGT 201 GTCCAATTTT TTTAACAACC TGTGCGACGT
GGTCAGCTTC GGCAGCAATA 251 TCTTGCGCTT GGACATCAAA CGCGCAAGCG
AAGACCTTGT CCGCGTCGGC 301 ATCAACACCA CTTTCGGTTT GGGCGGGCTT
ATCGACATCG CCGGCGCGGG 351 CGGCATTCCC GACAATAAAA ACACCTTGGG
CGACACGTTT GCCTCGTGGG 401 GATGGAAAAA CAGCAATTAT TTCGTGTTGC
CCGTCTTAGG GCCGTCCACC 451 GTCCGCGACG CGCTCGGCAC GGGTATTACC
TCCGTTTATT CGCCCAAGAA 501 TATCGTCTTC CGCACCCCTG TCGGACGCTG
GGGCACGACT GCCGTATCCG 551 CCGTCAGTAC GCGCGAAGGC CTgCTCGATT
TGACCGACAG TCTGGACGAA 601 GCCGCCATCG ACAAATACAG CTACACGCGC
GACCTCTATA TGAAAGTCCG 651 TGCGCGGCAG ACCGGTGCAA CACCTGCCGA
AGgTACGGAA GATAACATCG 701 ACATCGACGA ATTGGTCGAA AGTGCCGAAA
CCGGCGCGGC GGAAACTGCC 751 GTTCAAGAAG ATTCCGTATC CGAAACACAG
GCAGAAGCAG CAGGGGAAGC 801 CGAAACGCAA CCTGGAACAC AACCTTAA
This corresponds to the amino acid sequence <SEQ ID 2768; ORF
913>:
TABLE-US-03253 m913.pep 1 MKKTAYAFLL LIGFASAPAF AETRPADPYE
GYNRAVFKFN DQADRYIFAP 51 AARGYRKVAP KPVRAGVSNF FNNLCDVVSF
GSNILRLDIK RASEDLVRVG 101 INTTFGLGGL IDIAGAGGIP DNKNTLGDTF
ASWGWKNSNY FVLPVLGPST 151 VRDALGTGIT SVYSPKNIVF RTPVGRWGTT
AVSAVSTREG LLDLTDSLDE 201 AAIDKYSYTR DLYMKVRARQ TGATPAEGTE
DNIDIDELVE SAETGAAETA 251 VQEDSVSETQ AEAAGEAETQ PGTQP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 913
shows 94.9% identity over a 277 aa overlap with a predicted ORF
(ORF 913.ng) from N. gonorrhoeae:
TABLE-US-03254 g913/m913 10 20 30 40 50 60 g913.pep
MKKTAYAILLLIGFASAPAFAETRPADPYEGYNRAVSKFNDQADRYIFAPAARGYRKVTP
|||||||:|||||||||||||||||||||||||||| |||||||||||||||||||||:| m913
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAP 10 20
30 40 50 60 70 80 90 100 110 120 g913.pep
KPVRAGVSNFFNNLRDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGVP
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||:| m913
KPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIP 70 80
90 100 110 120 130 140 150 160 170 180 g913.pep
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYPPKNIVFHTPAGRWGTT
||||||||||||||||||||||||||||||||||||||||||| ||||||:||:|||||| m913
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYSPKNIVFRTPVGRWGTT 130
140 150 160 170 180 190 200 210 220 230 240 g913.pep
AAAAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDIDEL
|::|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| m913
AVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDI--DEL 190
200 210 220 230 250 260 270 g913.pep
VESAETGAAEPAVHEDSVSETQAEAAGEAETQPGTQPX ||||||||||
||:|||||||||||||||||||||||| m913
VESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQPX 240 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2769>:
TABLE-US-03255 a913.seq 1 ATGAAAAAAA CCGCCTATGC CTTCCTCCTG
CTGATCGGGT TCGCTTCCGC 51 CCCTGCATTT GCCGAAACCC GCCCCGCCGA
CCCTTATGAA GGCTACAACC 101 GCGCCGTTTT CAAATTCAAC GACCAAGCCG
ACCGCTACAT TTTCGCCCCT 151 GCCGCGCGCG GCTACCGCAA AGTTGCGCCG
AAACCCGTCC GCGCCGGCGT 201 GTCCAATTTT TTTAACAACC TGTGCGACGT
GGTCAGCTTC GGCAGCAATA 251 TCTTGCGCTT AGACATCAAA CGCGCAAGCG
AAGACCTTGT CCGCGTCGGT 301 ATCAACACCA CTTTCGGTTT GGGCGGGCTT
ATCGACATCG CCGGCGCGGG 351 CGGCATTCCC GACAATAAAA ACACCTTGGG
CGACACGTTT GCTTCGTGGG 401 GATGGAAAAA CAGCAATTAT TTCGTGTTGC
CCGTCTTAGG GCCGTCCACC 451 GTCCGCGACG CGCTCGGCAC GGGTATTACC
TCCGTTTATT CGCCCAAGAA 501 TATCGTCTTC CGCACCCCTG TCGGACGCTG
GGGCACGACT GCCGTATCCG 551 CCGTCAGTAC GCGCGAAGGC CTGCTCGATT
TGACCGACAG TCTGGACGAA 601 GCCGCCATCG ACAAATACAG CTACACGCGC
GACCTCTATA TGAAAGTCCG 651 TGCGCGGCAG ACCGGTGCAA CACCTGCCGA
AGGTACGGAA GATAACATCG 701 ACATCGACGA ATTGGTCGAA AGTGCCGAAA
CCGGCGCGGC GGAAACTGCC 751 GTTCAAGAAG ATTCCGTATC CGAAACACAG
GCAGAAGCAG CAGGGGAAGC 801 CGAAACGCAA CCTGGAACAC AACCTGGAAC
ACAACCTTAA
This corresponds to the amino acid sequence <SEQ ID 2770; ORF
913.a>:
TABLE-US-03256 a913.pep 1 MKKTAYAFLL LIGFASAPAF AETRPADPYE
GYNRAVFKFN DQADRYIFAP 51 AARGYRKVAP KPVRAGVSNF FNNLCDVVSF
GSNILRLDIK RASEDLVRVG 101 INTTFGLGGL IDIAGAGGIP DNKNTLGDTF
ASWGWKNSNY FVLPVLGPST 151 VRDALGTGIT SVYSPKNIVF RTPVGRWGTT
AVSAVSTREG LLDLTDSLDE 201 AAIDKYSYTR DLYMKVRARQ TGATPAEGTE
DNIDIDELVE SAETGAAETA 251 VQEDSVSETQ AEAAGEAETQ PGTQPGTQP*
m913/a913 100.0% identity in 275 aa overlap 10 20 30 40 50 60
m913.pep
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a913
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAP 10 20
30 40 50 60 70 80 90 100 110 120 m913.pep
KPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a913
KPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIP 70 80
90 100 110 120 130 140 150 160 170 180 m913.pep
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYSPKNIVFRTPVGRWGTT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a913
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYSPKNIVFRTPVGRWGTT 130
140 150 160 170 180 190 200 210 220 230 240 m913.pep
AVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a913
AVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE 190
200 210 220 230 240 250 260 270 m913.pep
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQPX
||||||||||||||||||||||||||||||||||| a913
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQPGTQPX 250 260 270 280
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2771>:
TABLE-US-03257 g914.seq 1 ATGAAAAAAT GTATTTTGGG CATTTTGACC
GCGTGTGCCG CCATGCCTGC 51 ATTTGCCGAC AGAATCAGCG ATTTGGAAGC
ACGTCTGGCG CAGTTGGAAC 101 ACCGTGTCGC CGTATTGGAA AGCGGCGGCA
ATACCGTCAA AATCGACCTT 151 TTCGGTTCAA ATTCCACCAT GTATGTATGC
AGCGTTACGC CTTTTCAGAA 201 GacgtttGag gCAAGCGATC GGAATGAAGG
CGTGGCGCGG CAGAAAGTGC 251 GTCAGGCGTG CAACCGCGAA ACTTCGGCAA
TGTTTTGCGG AGATGAGGCA 301 ATCCGATGCA GAAAATTCGA TTGATGTATC
GGTTGGACGG ATAAAGAAAC 351 GGATACGGAG CTTGGCTTCC GTCTCTGTTT
TTCTCTGCCC GATTTTCCAT 401 GCATCGGGTT TCAGACGGCA TTGGAGTGTC
AGTCGTGTTC TGCCGATTCG 451 taggctTCGA CGATTTTTTG CACCAGAGGA
TGCCGGACAA CGTCTTCGCC 501 GGTGAAGGTA TGGAAATACA GTCCTGCCAC
GCCGTGCAGT TTCTCACGTG 551 CGTCTTTCAA TCCCGATTTG ATGTTTTTGG
GCAGGTcgaT TTGGCTGGTG 601 TCGCCGGTAA TGACGGCTTT CGCgccgaag
ccGATGCGGG TCAGGAACAT 651 TTTCATTTGT TCGGGCGTGg tgTtttGcgC
TTCGTCGAGG ATGATGTATG 701 CGCCGTTGAg cgTCCTGCCG CGCATATAG
This corresponds to the amino acid sequence <SEQ ID 2772; ORF
914.ng>:
TABLE-US-03258 g914.pep 1 MKKCILGILT ACAAMPAFAD RISDLEARLA
QLEHRVAVLE SGGNTVKIDL 51 FGSNSTMYVC SVTPFQKTFE ASDRNEGVAR
QKVRQACNRE TSAMFCGDEA 101 IRCRKFD*CI GWTDKETDTE LGFRLCFSLP
DFPCIGFQTA LECQSCSADS 151 *ASTIFCTRG CRTTSSPVKV WKYSPATPCS
FSRASFNPDL MFLGRSIWLV 201 SPVMTAFAPK PMRVRNIFIC SGVVFCASSR
MMYAPLSVLP RI*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2773>:
TABLE-US-03259 m914.seq 1 ATGAAAAAAT GTATTTTGGG CATTTTGACC
GCGTGTGCCG CCATGCCTGC 51 ATTTGCCGAC AGAATCGGCG ATTTGGAAGC
ACGTCTGGCG CAGTTGGAAC 101 ACCGTGTCGC CGTATTGGAA AGCGGCGGCA
ATACCGTCAA AATCGACCTT 151 TTCGGTTCAA ATTCCACCAT GTATGTATGC
AGCGTTACGC CTTTTCAGAA 201 GACGTTTGAG GCAAGCGATC GGAATGAAGG
CGTGGCGCGG CAGAAAGTGC 251 GTCAGGCGTG CAACCGCGAA ACTTCGGCAA
TGTTTTGCGA AGATGAGGCA 301 ATCCGATGCA GAAAATTCGA TTGATGTATC
GGTTGGACGG ATAAAGAAAC 351 GGATACGGAT ACGGAGCTTG GCTTCCGTAT
CTGTTTTTCT CTGCCTGATT 401 TTCCATGCAT CGGGTTTCAG ACGGCATTGG
AATGTCAGTC GTGTTCTGCC 451 GATTCGTAGG CTTCGACGAT TTTTTGCACC
AAAGGATGCC GGACAACGTC 501 TTCGCCGGTA AAGGTGTGGA AATACAGCCC
TTCCACGTTG TGCAGTTTCT 551 CACGCGCATC TTTTAATCCC GATTTGATGT
TTTTGGGCAG GTCGATTTGG 601 CTGGTGTCGC CGGTAATGAC GGCTTTCGCG
CCGAAGCCGA TGCGGGTCAG 651 GAACATTTTC ATTTGTTCGG GCGTGGTGTT
TTGCGCTTCG TCGAGGATGA 701 TGTATGCGCC GTTGAGCGTC CTGCCGCGCA
TATAG
This corresponds to the amino acid sequence <SEQ ID 2774; ORF
914>:
TABLE-US-03260 m914.pep 1 MKKCILGILT ACAAMPAFAD RIGDLEARLA
QLEHRVAVLE SGGNTVKIDL 51 FGSNSTMYVC SVTPFQKTFE ASDRNEGVAR
QKVRQACNRE TSAMFCEDEA 101 IRCRKFDXCI GWTDKETDTD TELGFRICFS
LPDFPCIGFQ TALECQSCSA 151 DSXASTIFCT KGCRTTSSPV KVWKYSPSTL
CSFSRASFNP DLMFLGRSIW 201 LVSPVMTAFA PKPMRVRNIF ICSGVVFCAS
SRMMYAPLSV LPRI*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 914
shows 96.7% identity over a 244 aa overlap with a predicted ORF
(ORF 914.ng) from N. gonorrhoeae:
TABLE-US-03261 g914/m914 10 20 30 40 50 60 g914.pep
MKKCILGILTACAAMPAFADRISDLEARLAQLEHRVAVLESGGNTVKIDLFGSNSTMYVC
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| m914
MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGGNTVKIDLFGSNSTMYVC 10 20
30 40 50 60 70 80 90 100 110 119 g914.pep
SVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCGDEAIRCRKFDXCIGWTDKETDT-
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| m914
SVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIRCRKFDXCIGWTDKETDTD 70 80
90 100 110 120 120 130 140 150 160 170 g914.pep
-ELGFRLCFSLPDFPCIGFQTALECQSCSADSXASTIFCTRGCRTTSSPVKVWKYSPATP
|||||:|||||||||||||||||||||||||||||||||:||||||||||||||||:| m914
TELGFRICFSLPDFPCIGFQTALECQSCSADSXASTIFCTKGCRTTSSPVKVWKYSPSTL 130
140 150 160 170 180 180 190 200 210 220 230 g914.pep
CSFSRASFNPDLMFLGRSIWLVSPVMTAFAPKPMRVRNIFICSGVVFCASSRMMYAPLSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m914
CSFSRASFNPDLMFLGRSIWLVSPVMTAFAPKPMRVRNIFICSGVVFCASSRMMYAPLSV 190
200 210 220 230 240 240 g914.pep LPRIX ||||| m914 LPRIX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2775>:
TABLE-US-03262 a914.seq 1 ATGAAAAAAT GTATTTTGGG CATTTTGACC
GCGTGTGCCG CCATGCCTGC 51 ATTTGCCGAC AGAATCGGCG ATTTGGAAGC
ACGTCTGGCG CAGTTGGAAC 101 ACCGTGTCGC CGTATTGGAA AGCGGCAGCA
ATACCGTCAA AATCGACCTT 151 TTCGGTTCAA ATTCCACCAT GTATGTATGC
AGCGTTACGC CTTTTCAGAA 201 GACGTTTGAG GCAAGCGATC GGAATGAAGG
CGTGGCGCGG CAGAAAGTGC 251 GTCAGGCGTG CAACCGCGAA ACTTCGGCAA
TGTTTTGCGA AGATGAGGCA 301 ATCCGATGCA GAAAATTCGA TTGATGTATC
GGTTGGACGG ATAAAGAAAC 351 GGATACGGAG CTTGGCTTCC GTATCTGTTT
TTCTCTGCCC GATTTTCCAT 401 GCATCGGGTT TCAGACGGCA TTGGAATGTC
AGTCGTGTTC TGCCGATTCG 451 TAGGCTTCGA CGATTTTTTG CACCAAAGGA
TGCCGGACAA CGTCTTCGCC 501 GGTAAAGGTG TGGAAATACA GCCCTTCCAC
GCCGTGCAGT TTCTCACGCG 551 CATCTTTTAA TCCCGATTTG ATGTTTTTGG
GCAGGTCGAT TTGGCTGGTG 601 TCGCCGGTAA TGACGGCTTT CGCGCCGAAG
CCGATGCGGG TCAGGAACAT 651 TTTCATTTGT TCGGGCGTGG TGTTTTGCGC
TTCGTCGAGG ATGATGTATG 701 CGCCGTTGAG CGTCCTGCCG CGCATATAG
This corresponds to the amino acid sequence <SEQ ID 2776; ORF
914.a>:
TABLE-US-03263 a914.pep 1 MKKCILGILT ACAAMPAFAD RIGDLEARLA
QLEHRVAVLE SGSNTVKIDL 51 FGSNSTMYVC SVTPFQKTFE ASDRNEGVAR
QKVRQACNRE TSAMFCEDEA 101 IRCRKFD*CI GWTDKETDTE LGFRICFSLP
DFPCIGFQTA LECQSCSADS 151 *ASTIFCTKG CRTTSSPVKV WKYSPSTPCS
FSRASFNPDL MFLGRSIWLV 201 SPVMTAFAPK PMRVRNIFIC SGVVFCASSR
MMYAPLSVLP RI* m914/a914 98.4% identity in 244 aa overlap 10 20 30
40 50 60 m914.pep
MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGGNTVKIDLFGSNSTMYVC
||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||| a914
MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSNTVKIDLFGSNSTMYVC 10 20
30 40 50 60 70 80 90 100 110 120 m914.pep
SVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIRCRKFDXCIGWTDKETDTD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a914
SVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIRCRKFDXCIGWTDKETD-- 70 80
90 100 110 130 140 150 160 170 180 m914.pep
TELGFRICFSLPDFPCIGFQTALECQSCSADSXASTIFCTKGCRTTSSPVKVWKYSPSTL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a914
TELGFRICFSLPDFPCIGFQTALECQSCSADSXASTIFCTKGCRTTSSPVKVWKYSPSTP 120
130 140 150 160 170 190 200 210 220 230 240 m914.pep
CSFSRASFNPDLMFLGRSIWLVSPVMTAFAPKPMRVRNIFICSGVVFCASSRMMYAPLSV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a914
CSFSRASFNPDLMFLGRSIWLVSPVMTAFAPKPMRVRNIFICSGVVFCASSRMMYAPLSV 180
190 200 210 220 230 m914.pep LPRIX ||||| a914 LPRIX 240
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2777>:
TABLE-US-03264 g915.seq 1 ATGAAGAAAA CCCTGTTGGc AATTGTTGCC
gtTTTCGCCT TAAGTGCCTG 51 CCGGCaggcg gaAGaggcac cgccgCCTTT
ACCCCGGCAG AtTAGCGacc 101 gttcggtcgg aCACTAttgC Agtatgaacc
tgaccgaaca caacggcccc 151 aaagcccaga tttttttgaa cGGCAAACCC
GATCAGCCCG TTTGGTTCTC 201 CACCGTcaag cagatgttcg GCTATACCAA
GCTGCCCGAA GAGCCCAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCTAATG CCGACACGGA GTGGATAGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
CGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA GGAGCAGGCT GAAAAATTTG
CAAAGGATAA AGGCGGCAAG 451 GTCGTCGGTT TTGACGATAT GCCCGATGCT
TACATTTTCA AGTAA
This corresponds to the amino acid sequence <SEQ ID 2778; ORF
915.ng>:
TABLE-US-03265 g915.pep 1 MKKTLLAIVA VFALSACRQA EEAPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTVK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWID AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDA YIFK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2779>:
TABLE-US-03266 m915.seq 1 ATGAAAAAAA CCCTGTTGGC AATTGTTGCC
GTTTCCGCCT TAAGTGC.tG 51 CCGGCAGGCG GAAGAGGGAC CGCCGCCTTT
ACCcCGGCAG ATTAGCGACC 101 GTTCGGTCGG ACACTATTGC AGTATGAACC
TGACCGAACA CAACGGCCCC 151 AAAGCCCAGA TTTTCTTGAA CGGCAAACCC
GATCAGCCCG TtTGGTTCTC 201 CACCATCAAG CAGATGTTCG GCTATACCAA
GCTGCCCGAA GAGCCTAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCCAATG CCGACACGGA GTGGATGGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
TGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA AGAGCAGGCT GAGAAATTTG
CAAAGGATAA AGGCGGTAAG 451 GTTGTCGGTT TCGACGATAT GCCTGATACC
TATATTTTCA AATAA
This corresponds to the amino acid sequence <SEQ ID 2780; ORF
915>:
TABLE-US-03267 m915.pep 1 MKKTLLAIVA VSALSXCRQA EEGPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTIK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWMD AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDT YIFK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 915
shows 97.0% identity over a 164 aa overlap with a predicted ORF
(ORF 915.ng) from N. gonorrhoeae:
TABLE-US-03268 m915/g915 10 20 30 40 50 60 m915.pep
MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP
||||||||||| ||||||||||:||||||||||||||||||||||||||||||||||||| g915
MKKTLLAIVAVFALSACRQAEEAPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP 10 20
30 40 50 60 70 80 90 100 110 120 m915.pep
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS
||||||||:|||||||||||||||||||||||||||||||||||||||:||||||||||| g915
DQPVWFSTVKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWIDAKKAFYVIDS 70 80
90 100 110 120 130 140 150 160 m915.pep
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX
|||||||||||||||||||||||||||||||||||||||:||||| g915
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDAYIFKX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2781>:
TABLE-US-03269 a915.seq 1 ATGAAAAAAA CCCTGTTGGC AATTGTTGCC
GTTTCCGCCT TAAGTGCCTG 51 CCGGCAGGCG GAAGAGGGAC CGCCGCCTTT
ACCCCGGCAG ATTAGCGACC 101 GTTCGGTCGG ACACTATTGC AGTATGAACC
TGACCGAACA CAACGGCCCC 151 AAAGCCCAGA TTTTCTTGAA CGGCAAACCC
GATCAGCCCG TTTGGTTCTC 201 CACCATCAAG CAGATGTTCG GCTATACCAA
GCTGCCCGAA GAGCCTAAAG 251 GCATCCGCGT GATTTACGTT ACCGATATGG
GCAATGTTAC CGATTGGACG 301 AATCCCAATG CCGACACGGA GTGGATGGAT
GCGAAAAAAG CCTTTTACGT 351 CATCGACAGC GGCTTTATCG GCGGTATGGG
TGCGGAAGAC GCGCTGCCGT 401 TCGGCAACAA AGAGCAGGCT GAGAAATTTG
CAAAGGATAA AGGCGGTAAG 451 GTTGTCGGTT TCGACGATAT GCCTGATACC
TATATTTTCA AATAA
This corresponds to the amino acid sequence <SEQ ID 2782; ORF
915.a>:
TABLE-US-03270 a915.pep 1 MKKTLLAIVA VSALSACRQA EEGPPPLPRQ
ISDRSVGHYC SMNLTEHNGP 51 KAQIFLNGKP DQPVWFSTIK QMFGYTKLPE
EPKGIRVIYV TDMGNVTDWT 101 NPNADTEWMD AKKAFYVIDS GFIGGMGAED
ALPFGNKEQA EKFAKDKGGK 151 VVGFDDMPDT YIFK* m915/a915 99.4% identity
in 164 aa overlap 10 20 30 40 50 60 m915.pep
MKKTLLAIVAVSALSXCRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a915
MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNLTEHNGPKAQIFLNGKP 10 20
30 40 50 60 70 80 90 100 110 120 m915.pep
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a915
DQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNPNADTEWMDAKKAFYVIDS 70 80
90 100 110 120 130 140 150 160 m915.pep
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX
||||||||||||||||||||||||||||||||||||||||||||| a915
GFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDTYIFKX 130 140 150 160
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2783>:
TABLE-US-03271 g917.seq 1 ATGGTCAAac atctgccacT cgcCGTCctg
actgctTtgc tgcttgcagc 51 gtgcGGCGGT Tcggacaaac cgcctgccga
Aaaaccggca ccggcgGaAA 101 accaaAacgt atTgaAAATT TataACTGGT
CGGAATACGT CGATCCGGAA 151 ACCGTTGCCG ATTTTGAAAA GAAAAACGGC
ATCAAGGTTA CTTATGATGT 201 GTACGACAGT GATGAAACGC TGGAAAGCAA
GGTGCTGACC GGAAAATCCG 251 GTTACGACAT TGTCGCGCCG TCCAATGCGT
TTGTGGGCAG GCAGATTAAG 301 GCAGGTGCGT ATCAGAAAAT CGATAAGTCG
ATGATTCCCA ATTATAAACA 351 TCTCAACCCT GAAATGATGA GGCTGATGGA
CGGGGTCGAT CCCGACCACG 401 AATACGCCGT GCCGTTTTAT TGGGGGACAA
ATACCTTCGC CATCAATACC 451 GAACGCGTGA AAAAGGCTTT GGGTACGGAC
AAGCTGCCGG ACAACCAGTG 501 GGATTTGGTG TTCAACCCCG AATACACGTT
CAAACTCAAA CAATGCGGCA 551 TCAGCTATTT GGACAGCGCG GCGGAAATTT
ATCCCATGGT GTTGAACTAT 601 TTGGGCAAAA ACCCGAACAG CAGCAATACG
GAAGACATCA GGGAGGCAAC 651 CGCCCTGCTC AAGAAAAACC GCCCCAATAT
CAAACGCTTT ACTTCGTCCG 701 GCTTTATCGA TGATTTGGCG CGCGGCGATA
CCTGCGTAAC AATCGGTTTC 751 GGCGGAGATT TGAACATCGC CAAACGCCGT
GCCGAAGAAG CGGGCGGCAA 801 GGAAAAAATC CGCGTGATGA TGCCGAAAGA
GGGCGTGGGG ATTTGGGTGG 851 ATTCTTTCGT GATTCCGAAA GATGCGAAAA
ACGTCGCCAA CGCGCACAAA 901 TACATCAACG ACTTCCTCGA TCCGGAAGTG
TCGGCGAAAA ACGGCAATTT 951 cgttacCTAC GCGCCTTCGA GCAAGCCGGC
GCGCGATTTG ATGGAGGACG 1001 AATTTAAAAA CGACAATACG ATTTTCCCGA
GCGGGGAAGA TTTGAAAAAC 1051 AGCTTTATCA TGGTGCCTAT CCGGCCGGCG
GCATTGAAGT TTATGGTGCG 1101 CCAGTGGCAG GATGTGAAGG CGGGGAAATA A
This corresponds to the amino acid sequence <SEQ ID 2784; ORF
917.ng>:
TABLE-US-03272 g917.pep 1 MVKHLPLAVL TALLLAACGG SDKPPAEKPA
PAENQNVLKI YNWSEYVDPE 51 TVADFEKKNG IKVTYDVYDS DETLESKVLT
GKSGYDIVAP SNAFVGRQIK 101 AGAYQKIDKS MIPNYKHLNP EMMRLMDGVD
PDHEYAVPFY WGTNTFAINT 151 ERVKKALGTD KLPDNQWDLV FNPEYTFKLK
QCGISYLDSA AEIYPMVLNY 201 LGKNPNSSNT EDIREATALL KKNRPNIKRF
TSSGFIDDLA RGDTCVTIGF 251 GGDLNIAKRR AEEAGGKEKI RVMMPKEGVG
IWVDSFVIPK DAKNVANAHK 301 YINDFLDPEV SAKNGNFVTY APSSKPARDL
MEDEFKNDNT IFPSGEDLKN 351 SFIMVPIRPA ALKFMVRQWQ DVKAGK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2785>:
TABLE-US-03273 m917.seq 1 ATGACCAAAC ATCTGCCCCT GGCCGTCCTG
ACTGCTTTGC TGCTTGCAGC 51 GTGCGGCGGT TCGGACAAAC CGCCTGCCGA
AAAACCGGCA CCGGCGGAAA 101 ACCAAAACGT ATTGAAAATT TACAACTGGT
CGGAATATGT CGATCCGGAA 151 ACCGTTGCCG ATTTTGAAAA GAAAAACGGC
ATCAAGGTTA CTTATGATGT 201 GTACGACAGC GATGAAACGC TGGAAAGCAA
GGTGCTGACA GGCAAGTCCG 251 GTTACGACAT TGTCGCGCCG TCCAATGCGT
TTGTGGGCAG GCAGATTAAG 301 GCAGGTGCGT ATCAGAAAAT CGATAAGTCG
CTGATTCCCA ATTATAAACA 351 CCTCAACCCC GAAATGATGA GGCTGATGGA
CGGGGTCGAT CCCGGCCACG 401 AATACGCCGT GCCGTTTTAT TGGGGGACAA
ATACCTTCGC CATCAATACC 451 GAACGCGTGA AAAAGGCTTT GGGTACGGAC
AAGCTGCCGG ACAACCAGTG 501 GGATTTGGTG TTCGACCCCG AATACACGTC
CAAACTCAAG CAATGCGGCA 551 TCAGCTATTT GGACAGCGCG GCGGAAATCT
ATCCTATGGT GTTGAACTAT 601 TTGGGTAAAA ACCCGAACAG CAGCAATACG
GAAGACATCA GGGAGGCAAC 651 CGCCCTACTC AAGAAAAACC GCCCCAATAT
CAAACGCTTT ACTTCGTCCG 701 GCTTTATCGA TGATTTGGCG CGCGGCGATA
CCTGCGTAAC AATCGGTTTC 751 GGCGGCGATT TGAACATCGC CAAACGCCGT
GCCGAAGAAG CGGGCGGCAA 801 GGAAAAAATC CGCGTGATGA TGCCCAAAGA
GGGCGTGGGG ATTTGGGTGG 851 ATTCTTTCGT GATTCCGAAA GATGCGAAAA
ACGTCGCCAA CGCGCACAAA 901 TACATCAACG ACTTCCTCGA CCCGGAAGTG
TCGGCGAAAA ACGGCAATTT 951 CGTTACTTAC GCGCCTTCGA GCAAGCCTGC
GCGTGAGCTG ATGGAAGACG 1001 AATTTAAAAA CGACAATACG ATTTTCCCAA
CCGAGGAGGA TTTGAAAAAC 1051 AGCTTTATCA TGGTGCCTAT CCAGCCGGCG
GCATTGAAGT TTATGGTGCG 1101 CCAGTGGCAG GATGTGAAGG CGGGGAAATA A
This corresponds to the amino acid sequence <SEQ ID 2786; ORF
917>:
TABLE-US-03274 m917.pep 1 MTKHLPLAVL TALLLAACGG SDKPPAEKPA
PAENQNVLKI YNWSEYVDPE 51 TVADFEKKNG IKVTYDVYDS DETLESKVLT
GKSGYDIVAP SNAFVGRQIK 101 AGAYQKIDKS LIPNYKHLNP EMMRLMDGVD
PGHEYAVPFY WGTNTFAINT 151 ERVKKALGTD KLPDNQWDLV FDPEYTSKLK
QCGISYLDSA AEIYPMVLNY 201 LGKNPNSSNT EDIREATALL KKNRPNIKRF
TSSGFIDDLA RGDTCVTIGF 251 GGDLNIAKRR AEEAGGKEKI RVMMPKEGVG
IWVDSFVIPK DAKNVANAHK 301 YINDFLDPEV SAKNGNFVTY APSSKPAREL
MEDEFKNDNT IFPTEEDLKN 351 SFIMVPIQPA ALKFMVRQWQ DVKAGK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 917
shows 97.6% identity over a 376 aa overlap with a predicted ORF
(ORF 917.ng) from N. gonorrhoeae:
TABLE-US-03275 m917/g917 10 20 30 40 50 60 m917.pep
MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWSEYVDPETVADFEKKNG
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g917
MVKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWSEYVDPETVADFEKKNG 10 20
30 40 50 60 70 80 90 100 110 120 m917.pep
IKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAGAYQKIDKSLIPNYKHLNP
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| g917
IKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAGAYQKIDKSMIPNYKHLNP 70 80
90 100 110 120 130 140 150 160 170 180 m917.pep
EMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFDPEYTSKLK
||||||||||| |||||||||||||||||||||||||||||||||||||||:|||| ||| g917
EMMRLMDGVDPDHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFNPEYTFKLK 130
140 150 160 170 180 190 200 210 220 230 240 m917.pep
QCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATALLKKNRPNIKRFTSSGFIDDLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g917
QCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATALLKKNRPNIKRFTSSGFIDDLA 190
200 210 220 230 240 250 260 270 280 290 300 m917.pep
RGDICVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g917
RGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHK 250
260 270 280 290 300 310 320 330 340 350 360 m917.pep
YINDFLDPEVSAKNGNFVTYAPSSKPARELMEDEFKNDNTIFPTEEDLKNSFIMVPIQPA
||||||||||||||||||||||||||||:||||||||||||||: ||||||||||||:|| g917
YINDFLDPEVSAKNGNFVTYAPSSKPARDLMEDEFKNDNTIFPSGEDLKNSFIMVPIRPA 310
320 330 340 350 360 370 m917.pep ALKFMVRQWQDVKAGKX
||||||||||||||||| g917 ALKFMVRQWQDVKAGKX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2787>:
TABLE-US-03276 a917.seq 1 ATGACCAAAC ATCTGCCCCT GGCCGTCCTG
ACTGCTTTGC TGCTTGCAGC 51 GTGCGGCGGT TCGGACAAAC CGCCTGCCGA
AAAACCGGCG CCGGCGGAAA 101 ACCGAAACGT ATTGAAAATT TACAACTGGT
CGGAATACGT CGATCCGGAA 151 ACCGTTGCCG ATTTTGAAAA GAAAAACGGC
ATCAAGGTTA CTTATGATGT 201 GTACGACAGC GATGAAACGC TGGAAAGCAA
GGTGCTGACC GGAAAATCTG 251 GTTACGACAT TGTCGCGCCG TCCAATGCGT
TTGTGGGCAG GCAGATTAAG 301 GCAGGTGCGT ATCAGAAAAT CGATAAGTCG
CTGATTCCCA ATTATAAACA 351 CCTCAACCCC GAAATGATGA GGCTGATGGA
CGGGGTCGAT CCCGGCCACG 401 AATACGCCGT GCCGTTTTAT TGGGGGACAA
ATACCTTCGC CATCAATACC 451 GAACGCGTGA AAAAGGCTTT GGGTACGGAC
AAGCTGCCGG ACAACCAGTG 501 GGATTTGGTG TTCGACCCCG AATACACGTC
CAAACTCAAG CAATGCGGCA 551 TCAGCTATTT GGACAGCGCG GCGGAAATCT
ATCCTATGGT GTTGAACTAT 601 TTGGGTAAAA ACCCGAACAG CAGCAATACG
GAAGACATCA GGGAGGCAAC 651 CGCCCTACTC AAGAAAAACC GCCCCAATAT
CAAACGCTTT ACTTCGTCCG 701 GCTTTATCGA TGATTTGGCG CGCGGCGATA
CCTGCGTAAC AATCGGTTTC 751 GGCGGCGATT TGAACATCGC CAAACGCCGT
GCCGAAGAAG CGGGCGGCAA 801 GGAAAAAATC CGCGTGATGA TGCCCAAAGA
GGGCGTGGGG ATTTGGGTGG 851 ATTCTTTCGT GATTCCGAAA GATGCGAAAA
ACGTCGCCAA CGCGCACAAA 901 TACATCAACG ACTTCCTCGA CCCGGAAGTG
TCGGCGAAAA ACGGCAATTT 951 CGTTACTTAC GCGCCTTCGA GCAAGCCTGC
GCGTGAGCTG ATGGAAGACG 1001 AATTTAAAAA CGACAATACG ATTTTCCCAA
CCGAGGAGGA TTTGAAAAAC 1051 AGCTTTATCA TGGTGCCTAT CCAGCCGGCG
GCATTGAAGT TTATGGTGCG 1101 CCAGTGGCAG GATGTGAAGG CGGGGAAATA A
This corresponds to the amino acid sequence <SEQ ID 2788; ORF
917.a>:
TABLE-US-03277 a917.pep 1 MTKHLPLAVL TALLLAACGG SDKPPAEKPA
PAENRNVLKI YNWSEYVDPE 51 TVADFEKKNG IKVTYDVYDS DETLESKVLT
GKSGYDIVAP SNAFVGRQIK 101 AGAYQKIDKS LIPNYKHLNP EMMRLMDGVD
PGHEYAVPFY WGTNTFAINT 151 ERVKKALGTD KLPDNQWDLV FDPEYTSKLK
QCGISYLDSA AEIYPMVLNY 201 LGKNPNSSNT EDIREATALL KKNRPNIKRF
TSSGFIDDLA RGDTCVTIGF 251 GGDLNIAKRR AEEAGGKEKI RVMMPKEGVG
IWVDSFVIPK DAKNVANAHK 301 YINDFLDPEV SAKNGNFVTY APSSKPAREL
MEDEFKNDNT IFPTEEDLKN 351 SFIMVPIQPA ALKFMVRQWQ DVKAGK* m917/a917
99.7% identity in 376 aa overlap 10 20 30 40 50 60 m917.pep
MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWSEYVDPETVADFEKKNG
||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||| a917
MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWSEYVDPETVADFEKKNG 10 20
30 40 50 60 70 80 90 100 110 120 m917.pep
IKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAGAYQKIDKSLIPNYKHLNP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a917
IKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAGAYQKIDKSLIPNYKHLNP 70 80
90 100 110 120 130 140 150 160 170 180 m917.pep
EMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFDPEYTSKLK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a917
EMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTDKLPDNQWDLVFDPEYTSKLK 130
140 150 160 170 180 190 200 210 220 230 240 m917.pep
QCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATALLKKNRPNIKRFTSSGFIDDLA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a917
QCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATALLKKNRPNIKRFTSSGFIDDLA 190
200 210 220 230 240 250 260 270 280 290 300 m917.pep
RGDICVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a917
RGDICVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKNVANAHK 250
260 270 280 290 300 310 320 330 340 350 360 m917.pep
YINDFLDPEVSAKNGNFVTYAPSSKPARELMEDEFKNDNTIFPTEEDLKNSFIMVPIQPA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a917
YINDFLDPEVSAKNGNFVTYAPSSKPARELMEDEFKNDNTIFPTEEDLKNSFIMVPIQPA 310
320 330 340 350 360 370 m917.pep ALKFMVRQWQDVKAGKX
||||||||||||||||| a917 ALKFMVRQWQDVKAGKX 370
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2789>:
TABLE-US-03278 g919.seq 1 ATGAAAAAAC ACCTGCTCCG CTCCGCCCTG
TACGGcatCG CCGCCgccAT 51 CctcgCCGCC TGCCAAAgca gGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
CCGGCATCCC CGACCCCGCC 151 GGAACGACGG TTGCCGGCGG CGGGGCCGTC
TATACCGTTG TGCCGCACCT 201 GTCCATGCCC CACTGGGCGG CGCaggATTT
TGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTGCAT
TCCTTTCAGG CAAAGcGgTT 351 TTTTGAACGC TATTTCACGC cgtGGCaggt
tgcaggcaAC GGAAGcCTTG 401 Caggtacggt TACCGGCTAT TACGAACCGG
TGCTGAAGGG CGACGGCAGG 451 CGGACGGAAC GGGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCG CTGCCTGCCG GTTTGCGGGG
CGGAAAAAAC CTTGTCCGCA 551 TCAGGCAGac ggGGAAAAAC AGCGGCACGA
TCGACAATGC CGGCGGCACG 601 CATACCGCCG ACCTCTCCCG ATTCCCCATC
ACCGCGCGCA CAACGGcaat 651 caaaGGCAGG TTTGAaggAA GCCGCTTCCT
CCCTTACCAC ACGCGCAACC 701 AAAtcaacGG CGGCgcgcTT GACGGCAAag
cccCCATCCT CggttacgcC 751 GAagaccCcG tcgaacttTT TTTCATGCAC
AtccaaggCT CGGGCCGCCT 801 GAAAACCCcg tccggcaaat acatCCGCAt
cggaTacgcc gacAAAAACG 851 AACAtccgTa tgtttccatc ggACGctaTA
TGGCGGACAA AGGCTACCTC 901 AAGctcgggc agACCTCGAT GCAGGgcatc
aaagcCTATA TGCGGCAAAA 951 TCCGCAACGC CTCGCCGAAG TTTTGGGTCA
AAACCCCAGC TATATCTTTT 1001 TCCGCGAGCT TGCCGGAAGC GGCAATGAGG
GCCCCGTCGG CGCACTGGGC 1051 ACGCCACTGA TGGGGGAATA CGCCGGCGCA
ATCGACCGGC ACTACATTAC 1101 CTTGGGCGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CAGGCAGCGC GATCAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGTTAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATACGT
CTGGCAGCTC CTGCCCAACG 1301 GCATGAAGCC CGAATACCGC CCGTGA
This corresponds to the amino acid sequence <SEQ ID 2790; ORF
919.ng>:
TABLE-US-03279 g919.pep 1 MKKHLLRSAL YGIAAAILAA CQSRSIQTFP
QPDTSVINGP DRPAGIPDPA 51 GTTVAGGGAV YTVVPHLSMP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SFQAKRFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDGR 151 RTERARFPIY GIPDDFISVP LPAGLRGGKN
LVRIRQTGKN SGTIDNAGGT 201 HTADLSRFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KAYMRQNPQR LAEVLGQNPS
YIFFRELAGS GNEGPVGALG 351 TPLMGEYAGA IDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG AVRVDYFWGY GDEAGELAGK QKTTGYVWQL LPNGMKPEYR
P*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2791>:
TABLE-US-03280 m919.seq 1 ATGAAAAAAT ACCTATTCCG CGCCGCCCTG
TACGGCATCG CCGCCGCCAT 51 CCTCGCCGCC TGCCAAAGCA AGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
TCGGCATCCC CGACCCCGCC 151 GGAACGACGG TCGGCGGCGG CGGGGCCGTC
TATACCGTTG TACCGCACCT 201 GTCCCTGCCC CACTGGGCGG CGCAGGATTT
CGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTCCAT
TCCTTTCAGG CAAAACAGTT 351 TTTTGAACGC TATTTCACGC CGTGGCAGGT
TGCAGGCAAC GGAAGCCTTG 401 CCGGTACGGT TACCGGCTAT TACGAACCGG
TGCTGAAGGG CGACGACAGG 451 CGGACGGCAC AAGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCC CTGCCTGCCG GTTTGCGGAG
CGGAAAAGCC CTTGTCCGCA 551 TCAGGCAGAC GGGAAAAAAC AGCGGCACAA
TCGACAATAC CGGCGGCACA 601 CATACCGCCG ACCTCTCCcG ATTCCCCATC
ACCGCGCGCA CAACAGCAAT 651 CAAAGGCAGG TTTGAAGGAA GCCGCTTCCT
CCCCTACCAC ACGCGCAACC 701 AAATCAACGG CGGCGCGCTT GACGGCAAAG
CCCCGATACT CGGTTACGCC 751 GAAGACCCTG TCGAACTTTT TTTTATGCAC
ATCCAAGGCT CGGGCCGTCT 801 GAAAACCCCG TCCGGCAAAT ACATCCGCAT
CGGCTATGCC GACAAAAACG 851 AACATCCyTA CGTTTCCATC GGACGCTATA
TGGCGGATAA GGGCTACCTC 901 AAACTCGGAC AAACCTCCAT GCAGGGCATT
AAGTCTTATA TGCGGCAAAA 951 TCCGCAACGC CTCGCCGAAG TTTTGGGTCA
AAACCCCAGC TATATCTTTT 1001 TCCGCGAGCT TGCCGGAAGC AGCAATGACG
GCCCTGTCGG CGCACTGGGC 1051 ACGCCGCTGA TGGGGGAATA TGCCGGCGCA
GTCGACCGGC ACTACATTAC 1101 CTTGGGTGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CCGGCAGCGC GATTAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGATAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATATGT
CTGGCAGCTC CTACCCAACG GTATGAAGCC CGAATACCGc CCGTAA
This corresponds to the amino acid sequence <SEQ ID 2792; ORF
919>:
TABLE-US-03281 m919.pep 1 MKKYLFRAAL YGIAAAILAA CQSKSIQTFP
QPDTSVINGP DRPVGIPDPA 51 GTTVGGGGAV YTVVPHLSLP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SFQAKQFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDDR 151 RTAQARFPIY GIPDDFISVP LPAGLRSGKA
LVRIRQTGKN SGTIDNTGGT 201 HTADLSRFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KSYMRQNPQR LAEVLGQNPS
YIFFRELAGS SNDGPVGALG 351 TPLMGEYAGA VDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG 401 AVRVDYFWGY GDEAGELAGK QKTTGYVWQL
LPNGMKPEYR P*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2793>:
TABLE-US-03282 a919.seq 1 ATGAAAAAAT ACCTATTCCG CGCCGCCCTG
TGCGGCATCG CCGCCGCCAT 51 CCTCGCCGCC TGCCAAAGCA AGAGCATCCA
AACCTTTCCG CAACCCGACA 101 CATCCGTCAT CAACGGCCCG GACCGGCCGG
TCGGCATCCC CGACCCCGCC 151 GGAACGACGG TCGGCGGCGG CGGGGCCGTT
TATACCGTTG TGCCGCACCT 201 GTCCCTGCCC CACTGGGCGG CGCAGGATTT
CGCCAAAAGC CTGCAATCCT 251 TCCGCCTCGG CTGCGCCAAT TTGAAAAACC
GCCAAGGCTG GCAGGATGTG 301 TGCGCCCAAG CCTTTCAAAC CCCCGTCCAT
TCCGTTCAGG CAAAACAGTT 351 TTTTGAACGC TATTTCACGC CGTGGCAGGT
TGCAGGCAAC GGAAGCCTTG 401 CCGGTACGGT TACCGGCTAT TACGAGCCGG
TGCTGAAGGG CGACGACAGG 451 CGGACGGCAC AAGCCCGCTT CCCGATTTAC
GGTATTCCCG ACGATTTTAT 501 CTCCGTCCCC CTGCCTGCCG GTTTGCGGAG
CGGAAAAGCC CTTGTCCGCA 551 TCAGGCAGAC GGGAAAAAAC AGCGGCACAA
TCGACAATAC CGGCGGCACA 601 CATACCGCCG ACCTCTCCCA ATTCCCCATC
ACTGCGCGCA CAACGGCAAT 651 CAAAGGCAGG TTTGAAGGAA GCCGCTTCCT
CCCCTACCAC ACGCGCAACC 701 AAATCAACGG CGGCGCGCTT GACGGCAAAG
CCCCGATACT CGGTTACGCC 751 GAAGACCCCG TCGAACTTTT TTTTATGCAC
ATCCAAGGCT CGGGCCGTCT 801 GAAAACCCCG TCCGGCAAAT ACATCCGCAT
CGGCTATGCC GACAAAAACG 851 AACATCCCTA CGTTTCCATC GGACGCTATA
TGGCGGACAA AGGCTACCTC 901 AAGCTCGGGC AGACCTCGAT GCAGGGCATC
AAAGCCTATA TGCAGCAAAA 951 CCCGCAACGC CTCGCCGAAG TTTTGGGGCA
AAACCCCAGC TATATCTTTT 1001 TCCGAGAGCT TACCGGAAGC AGCAATGACG
GCCCTGTCGG CGCACTGGGC 1051 ACGCCGCTGA TGGGCGAGTA CGCCGGCGCA
GTCGACCGGC ACTACATTAC 1101 CTTGGGCGCG CCCTTATTTG TCGCCACCGC
CCATCCGGTT ACCCGCAAAG 1151 CCCTCAACCG CCTGATTATG GCGCAGGATA
CCGGCAGCGC GATTAAAGGC 1201 GCGGTGCGCG TGGATTATTT TTGGGGATAC
GGCGACGAAG CCGGCGAACT 1251 TGCCGGCAAA CAGAAAACCA CGGGATATGT
CTGGCAGCTT CTGCCCAACG 1301 GTATGAAGCC CGAATACCGC CCGTAA
This corresponds to the amino acid sequence <SEQ ID 2794; ORF
919.a>:
TABLE-US-03283 a919.pep 1 MKKYLFRAAL CGIAAAILAA CQSKSIQTFP
QPDTSVINGP DRPVGIPDPA 51 GTTVGGGGAV YTVVPHLSLP HWAAQDFAKS
LQSFRLGCAN LKNRQGWQDV 101 CAQAFQTPVH SVQAKQFFER YFTPWQVAGN
GSLAGTVTGY YEPVLKGDDR 151 RTAQARFPIY GIPDDFISVP LPAGLRSGKA
LVRIRQTGKN SGTIDNTGGT 201 HTADLSQFPI TARTTAIKGR FEGSRFLPYH
TRNQINGGAL DGKAPILGYA 251 EDPVELFFMH IQGSGRLKTP SGKYIRIGYA
DKNEHPYVSI GRYMADKGYL 301 KLGQTSMQGI KAYMQQNPQR LAEVLGQNPS
YIFFRELTGS SNDGPVGALG 351 TPLMGEYAGA VDRHYITLGA PLFVATAHPV
TRKALNRLIM AQDTGSAIKG 401 AVRVDYFWGY GDEAGELAGK QKTTGYVWQL
LPNGMKPEYR P* m919/a919 98.6% identity in 441 aa overlap 10 20 30
40 50 60 m919.pep
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAV
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| a919
MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAV 10 20
30 40 50 60 70 80 90 100 110 120 m919.pep
YTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKQFFER
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| a919
YTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSVQAKQFFER 70 80
90 100 110 120 130 140 150 160 170 180 m919.pep
YFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
YFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKA 130
140 150 160 170 180 190 200 210 220 230 240 m919.pep
LVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| a919
LVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIKGRFEGSRFLPYHTRNQINGGAL 190
200 210 220 230 240 250 260 270 280 290 300 m919.pep
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
DGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYL 250
260 270 280 290 300 310 320 330 340 350 360 m919.pep
KLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALGTPLMGEYAGA
|||||||||||:||:||||||||||||||||||||||:|||||||||||||||||||||| a919
KLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFFRELTGSSNDGPVGALGTPLMGEYAGA 310
320 330 340 350 360 370 380 390 400 410 420 m919.pep
VDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a919
VDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK 370
380 390 400 410 420 430 440 m919.pep QKTTGYVWQLLPNGMKPEYRPX
|||||||||||||||||||||| a919 QKTTGYVWQLLPNGMKPEYRPX 430 440
Expression of ORF 919
[0434] The primer described in Example 1 for ORF 919 was used to
locate and clone ORF 919. This sequence was purified and expressed
in E. coli as provided in FIG. 1 #. The hydrophilicity plots,
antigenic index, and amphipatic regions of ORF 919 is provided in
FIG. 5 #. The AMPHI program is used to predict putative T-cell
epitopes (Gao et al 1989, J. Immunol 143:3007; Roberts et al. 1996,
AIDS Res Human Retroviruses 12:593; Quakyi et al. 1992, Scand J
Immunol Suppl 11:9). The nucleic acid sequence of ORF 919 is
provided in Exhibit C #. The following partial DNA sequence was
identified in N. gonorrhoeae <SEQ ID 2795>:
TABLE-US-03284 g920.seq (partial) 1 ..ccgatgcagc tggttaccga
aaaAGGTAAG GAAAACATGA TTCAACGCGG 51 CACATACAAC TACCAATACC
GCAGCAACCG TCCGGTCAAA GACGGCAGCT 101 ACCTCGTTAC CGCCGAATAT
CAGCCTACTT TCCGGTCAAA AAACAAAGCA 151 GGCTGGAAAC AGGCTGGCAT
CAAAGAAATG CCTGACGCAA GCTATTGCGA 201 ACAAACCCGT ATGTTCGGTA
AAAACATTGT CAACGTGGGA CACGAAAGCG 251 CGGACACCGC CATCATCACC
AAACCGGTCG GACAAAACTT GGAAATCGTC 301 CCGCTGGACA ATCccgccga
caTTCACgtg ggctaacgCt tcaaaGTccg 351 cgttCtgttc cgtGGCgaac
cgCTGcccaa tgccACCgtt accgCtacAT 401 TTGacggctt cGAcaccagc
gaccgcagca aaacgcacaa Aaccgaagcc 451 caagcctTCT ccgacaccac
cgacggcgaa ggcgaagtgg acatcatCCC 501 CTTGCgccaa GGCTTttgga
aAgcGAGTGT CGAATAcaaa gccgAtttcc 551 CCGATcaaAG CCTGTGccga
AAACAggcgA ACTACaCaac TTtaaccttc 601 caaatcgccc attctCacca tTAa
This corresponds to the amino acid sequence <SEQ ID 2796; ORF
920.ng>:
TABLE-US-03285 g920.pep (partial) 1 ..PMQLVTEKGK ENMIQRGTYN
YQYRSNRPVK DGSYLVTAEY QPTFRSKNKA 51 GWKQAGIKEM PDASYCEQTR
MFGKNIVNVG HESADTAIIT KPVGQNLEIV 101 PLDNPADIHV GXRFKVRVLF
RGEPLPNATV TATFDGFDTS DRSKTHKTEA 151 QAFSDTTDGE GEVDIIPLRQ
GFWKASVEYK ADFPDQSLCR KQANYTTLTF 201 QIAHSHH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2797>:
TABLE-US-03286 m920.seq 1 ATGAAGAAAA CATTGACACT GCTCTCCGTT
TCCGCCCTAT TTGCCACATC 51 CGCCCACGCC CACCGmGTCT GGGTCGAAAC
CGCCCACACG CACGGCGGCG 101 AATACCTTAA AGCCGACTTG GGCTACGGCG
AATTTCCCGA ACTCGAACCC 151 ATCGCCAAAG ACCGCCTGCA CATCTTCAGC
AAACCGATGC AGCTGGTTAC 201 CGAAAAAGGC AAGGAAAACA TGATTCAACG
CGGCACATAC AACTACCAGT 251 ACCGAAGCAA CCGTCCCGTT AAGGACGGCA
GTTACCTCGT CATCGCCGAA 301 TATCAGCCTA CTTTCTGGTC AAAAwACAAA
GCAGGCTGGA AACAGGCGGG 351 CATCAAAGAA ATGCCTGACG CAAGCTATTG
CGAACAAACC CGAATGTTCG 401 GCAAAAACAT CGTCAACGTC GGACACGAAA
GCGCGGACAC CGCCATCATC 451 ACCAArCCGG TCGGACAAAA CTTGGAAATC
GTCCCGCTGG ACAATCCCGC 501 CAACATTCAC GTAGGCGAAC GCTTCAAAGT
CCGCGTTCTG TTCCGTGGCG 551 AACCGCTGCC CAATGCCACC GTTACCGCCA
CCTTTGACGG CTTCGACACC 601 AGCGACCGCA GCAAAACGCA CAAwmCCGAA
GCACAGGCTT TCTCCGACAG 651 CACAGACGAC AAAGGCGAAG TGGACATCAT
CmCCTTGCGC CAAGGCTTCT 701 GGAAAGCCAA TGTCGAACAC AAAACCGACT
TCCCCGATCA AAGCGTGTGC 751 CAAAAACAGG CGAACTACTC GACTTTAACC
TTCCAAATCG GTCATTCGCA 801 CCATTAA
This corresponds to the amino acid sequence <SEQ ID 2798; ORF
920>:
TABLE-US-03287 m920.pep 1 MKKTLTLLSV SALFATSAHA HRVWVETAHT
HGGEYLKADL GYGEFPELEP 51 IAKDRLHIFS KPMQLVTEKG KENMIQRGTY
NYQYRSNRPV KDGSYLVIAE 101 YQPTFWSKXK AGWKQAGIKE MPDASYCEQT
RMFGKNIVNV GHESADTAII 151 TKPVGQNLEI VPLDNPANIH VGERFKVRVL
FRGEPLPNAT VTATFDGFDT 201 SDRSKTHXXE AQAFSDSTDD KGEVDIIXLR
QGFWKANVEH KTDFPDQSVC 251 QKQANYSTLT FQIGHSHH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 920
shows 91.3% identity over a 207 aa overlap with a predicted ORF
(ORF 920.ng) from N. gonorrhoeae:
TABLE-US-03288 g920/m920 10 20 30 g920.pep
PMQLVTEKGKENMIQRGTYNYQYRSNRPVK |||||||||||||||||||||||||||||| m920
GGEYLKADLGYGEFPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVK 40 50
60 70 80 90 40 50 60 70 80 90 g920.pep
DGSYLVTAEYQPTFRSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIIT ||||||
||||||| || |||||||||||||||||||||||||||||||||||||||||| m920
DGSYLVIAEYQPTFWSKXKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIIT 100
110 120 130 140 150 100 110 120 130 140 150 g920.pep
KPVGQNLEIVPLDNPADIHVGXRFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEA
||||||||||||||||:|||| |||||||||||||||||||||||||||||||||| :|| m920
KPVGQNLEIVPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHXXEA 160
170 180 190 200 210 160 170 180 190 200 g920.pep
QAFSDTTDGEGEVDIIPLRQGFWKASVEYKADFPDQSLCRKQANYTTLTFQIAHSHHX |||||:||
:|||||| ||||||||:||:|:||||||:|:|||||:||||||:||||| m920
QAFSDSTDDKGEVDIIXLRQGFWKANVEHKTDFPDQSVCQKQANYSTLTFQIGHSHHX 220 230
240 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2799>:
TABLE-US-03289 a920.seq 1 TGAAAGAAAA CATTGACACT GCTCGCCGTT
TCCGCCCTAT TTGCCGCATC 51 CGCCCACGCC CACCGCGTCT GGGTCGAAAC
CGCCCACACG CACGGCGGCG 101 AATACCTTAA AGCCGACTTG GGCTACGGCG
AATTTCCCGA ACTCGAACCC 151 ATCGCCAAAG ACCGCCTGCA CATCTTCAGC
AAACCGATGC AGCTGGTTAC 201 CGAAAAAGGC AAGGAAAACA TGATTCAACG
CGGCACATAC AACTACCAGT 251 ACCGAAGCAA CCGTCCCGTT AAGGACGGCA
GTTACCTCGT CATCGCCGAA 301 TATCAGCCTA CTTTCTGGTC AAAAAACAAA
GCAGGCTGGA AACAGGCGGG 351 CATCAAACAA ATGCCTGACG CAAGCTATTG
CGAACAAACC CGAATGTTCG 401 GCAAAAACAT CGTCAACGTC GGACACGAAA
GCGCGGACAC CGCCATCATC 451 ACCAAACCGG TCGGACAAAA CTTGGAAATC
GTCCCGCTGG ACAATCCCGC 501 CAACATTCAC GTAGGCGAAC GCTTCAAAGT
CCGCGTTCTG TTCCGTGGCG 551 AACCGCTGCC CAATGCCACC GTTACCGCCA
CCTTTGACGG CTTCGACACC 601 AGCGACCGCA GCAAAACGCA CAAAACCGAA
GCACAGGCTT TCTCCGACAG 651 CACAGACGAC AAAGGCGAAG TGGACATCAT
CCCCTTGCGC CAAGGCTTCT 701 GGAAAGCCAA TGTCGAACAC AAAGCCGACT
TCCCCGATCA AAGCGTGTGC 751 CAAAAACAGG CGAACTACTC GACTTTAACC
TTCCAAATCG GCCATTCGCA 801 CCATTAA
This corresponds to the amino acid sequence <SEQ ID 2800; ORF
920.a>:
TABLE-US-03290 a920.pep 1 *KKTLTLLAV SALFAASAHA HRVWVETAHT
HGGEYLKADL GYGEFPELEP 51 IAKDRLHIFS KPMQLVTEKG KENMIQRGTY
NYQYRSNRPV KDGSYLVIAE 101 YQPTFWSKNK AGWKQAGIKQ MPDASYCEQT
RMFGKNIVNV GHESADTAII 151 TKPVGQNLEI VPLDNPANIH VGERFKVRVL
FRGEPLPNAT VTATFDGFDT 201 SDRSKTHKTE AQAFSDSTDD KGEVDIIPLR
QGFWKANVEH KADFPDQSVC 251 QKQANYSTLT FQIGHSHH* m920/a920 97.0%
identity in 267 aa overlap 10 20 30 40 50 60 m920.pep
MKKTLTLLSVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS
|||||||:||||||:|||||||||||||||||||||||||||||||||||||||||||| a920
XKKTLTLLAVSALFAASAHAHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS 10 20
30 40 50 60 70 80 90 100 110 120 m920.pep
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQPTFWSKXKAGWKQAGIKE
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||: a920
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQPTFWSKNKAGWKQAGIKQ 70 80
90 100 110 120 130 140 150 160 170 180 m920.pep
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a920
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL 130
140 150 160 170 180 190 200 210 220 230 240 m920.pep
FRGEPLPNATVTATFDGFDTSDRSKTHXXEAQAFSDSTDDKGEVDIIXLRQGFWKANVEH
||||||||||||||||||||||||||| :|||||||||||||||||| |||||||||||| a920
FRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDSTDDKGEVDIIPLRQGFWKANVEH 190
200 210 220 230 240 250 260 269 m920.pep
KTDFPDQSVCQKQANYSTLTFQIGHSHHX |:||||||||||||||||||||||||||| a920
KADFPDQSVCQKQANYSTLTFQIGHSHHX 250 260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2801>:
TABLE-US-03291 g920-1.seq 1 ATGAAGAAAA CATTGACACT GCTCGCcgtt
TcCGCACTAT TTGCCACATc 51 cgCaCACCCC CACCgCGTCT GGGTCGAAAC
CgccCACACg cAcgGCGGCG 101 AATACCTTAA AGCCGACTTG GGCTACGGCG
AATTCCCCGA ACTCGAACCC 151 ATCGccAAAG ACCgccTGCA CATCTTCAGC
AAACCGATGC AGCTGGTTAC 201 CGAAAAAGGT AAGGAAAACA TGATTCAACG
CGGCACATAC AACTACCAAT 251 ACCGCAGCAA CCGTCCCGTC AAAGACGGCA
GCTACCTCGT TACCGCCGAA 301 TATCAGCCTA CTTTCCGGTC AAAAAACAAA
GCAGGCTGGA AACAGGCTGG 351 CATCAAAGAA ATGCCTGACG CAAGCTATTG
CGAACAAACC CGTATGTTCG 401 GTAAAAACAT TGTCAACGTG GGACACGAAA
GCGCGGACAC CGCCATCATC 451 ACCAAACCGG TCGGACAAAA CTTGGAAATC
GTCCCGCTGG ACAATCCCGC 501 CAACATTCAC GTAGGCGAAC GCTTCAAAGT
CCGCGTTCTG TTCCGTGGCG 551 AACCGCTGCC CAATGCCACC GTTACCGCTA
CATTTGACGG CTTCGACACC 601 AGCGACCGCA GCAAAACGCA CAAAACCGAA
GCCCAAGCCT TCTCCGACAC 651 CACCGACGGC AAAGGCGAAG TGGACATCAT
CCCCTTGCGC CAAGGCTTTT 701 GGAAAGCGAG TGTCGAATAC AAAGCCGATT
TCCCCGATCA AAGCCTGTGC 751 CAAAAACAGG CGAACTACAC AACTTTAACC
TTCCAAATCG GCCATTCTCA 801 CCATTAA
This corresponds to the amino acid sequence <SEQ ID 2802; ORF
920-1.ng>:
TABLE-US-03292 g920-1.pep 1 MKKTLTLLAV SALFATSAHP HRVWVETAHT
HGGEYLKADL GYGEFPELEP 51 IAKDRLHIFS KPMQLVTEKG KENMIQRGTY
NYQYRSNRPV KDGSYLVTAE 101 YQPTFRSKNK AGWKQAGIKE MPDASYCEQT
RMFGKNIVNV GHESADTAII 151 TKPVGQNLEI VPLDNPANIH VGERFKVRVL
FRGEPLPNAT VTATFDGFDT 201 SDRSKTHKTE AQAFSDTTDG KGEVDIIPLR
QGFWKASVEY KADFPDQSLC 251 QKQANYTTLT FQIGHSHH*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2803>:
TABLE-US-03293 m920-1.seq 1 ATGAAGAAAA CATTGACACT GCTCGCCGTT
TCCGCCCTAT TTGCCACATC 51 CGCCCACGCC CACCGCGTCT GGGTCGAAAC
CGCCCACACG CACGGCGGCG 101 AATACCTTAA AGCCGACTTG GGCTACGGCG
AATTTCCCGA ACTCGAACCC 151 ATCGCCAAAG ACCGCCTGCA CATCTTCAGC
AAACCGATGC AGCTGGTTAC 201 CGAAAAAGGC AAGGAAAACA TGATTCAACG
CGGCACATAC AACTACCAGT 251 ACCGAAGCAA CCGTCCCGTT AAGGACGGCA
GTTACCTCGT CATCGCCGAA 301 TATCAGCCTA CTTTCTGGTC AAAAAACAAA
GCAGGCTGGA AACAGGCGGG 351 CATCAAAGAA ATGCCTGACG CAAGCTATTG
CGAACAAACC CGAATGTTCG 401 GCAAAAACAT CGTCAACGTC GGACACGAAA
GCGCGGACAC CGCCATCATC 451 ACCAAACCGG TCGGACAAAA CTTGGAAATC
GTCCCGCTGG ACAATCCCGC 501 CAACATTCAC GTAGGCGAAC GCTTCAAAGT
CCGCGTTCTG TTCCGTGGCG 551 AACCGCTGCC CAATGCCACC GTTACCGCCA
CCTTTGACGG CTTCGACACC 601 AGCGACCGCA GCAAAACGCA CAAAACCGAA
GCACAGGCTT TCTCCGACAG 651 CACAGACGAC AAAGGCGAAG TGGACATCAT
CCCCTTGCGC CAAGGCTTCT 701 GGAAAGCCAA TGTCGAACAC AAAACCGACT
TCCCCGATCA AAGCGTGTGC 751 CAAAAACAGG CGAACTACTC GACTTTAACC
TTCCAAATCG GTCATTCGCA 801 CCATTAA
This corresponds to the amino acid sequence <SEQ ID 2804; ORF
920-1>:
TABLE-US-03294 m920-1.pep 1 MKKTLTLLAV SALFATSAHA HRVWVETAHT
HGGEYLKADL GYGEFPELEP 51 IAKDRLHIFS KPMQLVTEKG KENMIQRGTY
NYQYRSNRPV KDGSYLVIAE 101 YQPTFWSKNK AGWKQAGIKE MPDASYCEQT
RMFGKNIVNV GHESADTAII 151 TKPVGQNLEI VPLDNPANIH VGERFKVRVL
FRGEPLPNAT VTATFDGFDT 201 SDRSKTHKTE AQAFSDSTDD KGEVDIIPLR
QGFWKANVEH KTDFPDQSVC 251 QKQANYSTLT FQIGHSHH* m920-1/g920-1 96.3%
identity in 268 aa overlap 10 20 30 40 50 60 m920-1.pep
MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| g920-1
MKKTLTLLAVSALFATSAHPHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS 10 20
30 40 50 60 70 80 90 100 110 120 m920-1.pep
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQPTFWSKNKAGWKQAGIKE
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| g920-1
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVTAEYQPTFRSKNKAGWKQAGIKE 70 80
90 100 110 120 130 140 150 160 170 180 m920-1.pep
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g920-1
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL 130
140 150 160 170 180 190 200 210 220 230 240 m920-1.pep
FRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDSTDDKGEVDIIPLRQGFWKANVEH
||||||||||||||||||||||||||||||||||||:|| ||||||||||||||||:||: g920-1
FRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTTDGKGEVDIIPLRQGFWKASVEY 190
200 210 220 230 240 250 260 269 m920-1.pep
KTDFPDQSVCQKQANYSTLTFQIGHSHHX |:||||||:|||||||:|||||||||||| g920-1
KADFPDQSLCQKQANYTTLTFQIGHSHHX 250 260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2805>:
TABLE-US-03295 a920.seq 1 TGAAAGAAAA CATTGACACT GCTCGCCGTT
TCCGCCCTAT TTGCCGCATC 51 CGCCCACGCC CACCGCGTCT GGGTCGAAAC
CGCCCACACG CACGGCGGCG 101 AATACCTTAA AGCCGACTTG GGCTACGGCG
AATTTCCCGA ACTCGAACCC 151 ATCGCCAAAG ACCGCCTGCA CATCTTCAGC
AAACCGATGC AGCTGGTTAC 201 CGAAAAAGGC AAGGAAAACA TGATTCAACG
CGGCACATAC AACTACCAGT 251 ACCGAAGCAA CCGTCCCGTT AAGGACGGCA
GTTACCTCGT CATCGCCGAA 301 TATCAGCCTA CTTTCTGGTC AAAAAACAAA
GCAGGCTGGA AACAGGCGGG 351 CATCAAACAA ATGCCTGACG CAAGCTATTG
CGAACAAACC CGAATGTTCG 401 GCAAAAACAT CGTCAACGTC GGACACGAAA
GCGCGGACAC CGCCATCATC 451 ACCAAACCGG TCGGACAAAA CTTGGAAATC
GTCCCGCTGG ACAATCCCGC 501 CAACATTCAC GTAGGCGAAC GCTTCAAAGT
CCGCGTTCTG TTCCGTGGCG 551 AACCGCTGCC CAATGCCACC GTTACCGCCA
CCTTTGACGG CTTCGACACC 601 AGCGACCGCA GCAAAACGCA CAAAACCGAA
GCACAGGCTT TCTCCGACAG 651 CACAGACGAC AAAGGCGAAG TGGACATCAT
CCCCTTGCGC CAAGGCTTCT 701 GGAAAGCCAA TGTCGAACAC AAAGCCGACT
TCCCCGATCA AAGCGTGTGC 751 CAAAAACAGG CGAACTACTC GACTTTAACC
TTCCAAATCG GCCATTCGCA 801 CCATTAA
This corresponds to the amino acid sequence <SEQ ID 2806; ORF
920-1.a>:
TABLE-US-03296 a920.pep 1 *KKTLTLLAV SALFAASAHA HRVWVETAHT
HGGEYLKADL GYGEFPELEP 51 IAKDRLHIFS KPMQLVTEKG KENMIQRGTY
NYQYRSNRPV KDGSYLVIAE 101 YQPTFWSKNK AGWKQAGIKQ MPDASYCEQT
RMFGKNIVNV GHESADTAII 151 TKPVGQNLEI VPLDNPANIH VGERFKVRVL
FRGEPLPNAT VTATFDGFDT 201 SDRSKTHKTE AQAFSDSTDD KGEVDIIPLR
QGFWKANVEH KADFPDQSVC 251 QKQANYSTLT FQIGHSHH* m920-1/a920 98.9%
identity in 267 aa overlap 10 20 30 40 50 60 m920-1.pep
MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS
||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||| a920
XKKTLTLLAVSALFAASAHAHRVWVETAHTHGGEYLKADLGYGEFPELEPIAKDRLHIFS 10 20
30 40 50 60 70 80 90 100 110 120 m920-1.pep
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQPTFWSKNKAGWKQAGIKE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||: a920
KPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQPTFWSKNKAGWKQAGIKQ 70 80
90 100 110 120 130 140 150 160 170 180 m920-1.pep
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a920
MPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEIVPLDNPANIHVGERFKVRVL 130
140 150 160 170 180 190 200 210 220 230 240 m920-1.pep
FRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDSTDDKGEVDIIPLRQGFWKANVEH
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a920
FRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDSTDDKGEVDIIPLRQGFWKANVEH 190
200 210 220 230 240 250 260 269 m920-1.pep
KTDFPDQSVCQKQANYSTLTFQIGHSHHX |:||||||||||||||||||||||||||| a920
KADFPDQSVCQKQANYSTLTFQIGHSHHX 250 260
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2807>:
TABLE-US-03297 g921.seq 1 ATGAAAAAAT ACCTTATCCC TCTTTCCATT
GCGGCAGTCC TTTCCGggtG 51 Ccagtctatt tatGtgccca cattgacggA
aatccccgTg aatcccatca 101 ataCCgtcaa aacggaagCA CCTGCAAAAG
GTTTTCGCCT CGCCCCTTCG 151 CATTGGGCGG ATGTTGCCAA AATCAGCGAT
GAAGCGACGC GCTTGGGCTA 201 TCAGGTGGGT ATCGGTAAAA TGACCAAGGT
TCAGGcgGCG CAATATCTGA 251 ACAACTTCAG AAAACGCCTG GTCGGACGCA
ATGCCGTCGA TGACAGTATG 301 TATGAAATCT ACCTGCGTTC GGCGGTAGAC
AGCCAGCGCG GCGAAATCAA 351 TACGGAACAG TCCAAGCTGT ATATCGAGAA
TGCCTTGCGC GGCTGGCAGC 401 AGCGTtggAA AAATATGGAT GCCAAACCCG
ATAATCCCGC ATTTACCAAC 451 TTTTTGATGG AAGTGATGAA GATGCAGCCC
TTGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2808; ORF
921.ng>:
TABLE-US-03298 g921.pep 1 MKKYLIPLSI AAVLSGCQSI YVPTLTEIPV
NPINTVKTEA PAKGFRLAPS 51 HWADVAKISD EATRLGYQVG IGKMTKVQAA
QYLNNFRKRL VGRNAVDDSM 101 YEIYLRSAVD SQRGEINTEQ SKLYIENALR
GWQQRWKNMD AKPDNPAFTN 151 FLMEVMKMQP LK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2809>:
TABLE-US-03299 m921.seq 1 ATGAAAAAAT ACCTTATCCC TCTTTCCATT
GCGGCAGTTC TTTCCGGCTG 51 CCAGTCTATT TATGTGCCCA CATTGACGGA
AATCCCCGTG AATCCTATCA 101 ATACCGTCAA AACGGAAGCA CCTGCAAAAG
GTTTCCGCCT TGCCTCTTCG 151 CATTGGACGG ATGTTGCCAA AATCAGCGAT
GAAGCGACGC GCTTGGGCTA 201 TCAGGTGGGT ATCGGTAAAA TGACCAAGGT
TCAGGCGGCG CAATATCTGA 251 ACAACTTCAG AAAACGCCTG GTCGGACGCA
ATGCCGTCGA TGACAGTATG 301 TATGAAATCT ACCTGCGTTC GGCGATAGAC
AGCCAGCGGG GCGCAATCAA 351 TACGGAACAG TCCAAGCTGT ATATCCAGAA
TGCCTTGCGC GGCTGGCAGC 401 AGCGTTGGAA AAATATGGAT GTCAAACCCA
ACAACCCCGC ATTTACCAAC 451 TTTTTGATGG AAGTGATGAA GATGCAGCCC
TTGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2810; ORF
921>:
TABLE-US-03300 m921.pep 1 MKKYLIPLSI AAVLSGCQSI YVPTLTEIPV
NPINTVKTEA PAKGFRLASS 51 HWTDVAKISD EATRLGYQVG IGKMTKVQAA
QYLNNFRKRL VGRNAVDDSM 101 YEIYLRSAID SQRGAINTEQ SKLYIQNALR
GWQQRWKNMD VKPNNPAFTN 151 FLMEVMKMQP LK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 921
shows 95.7% identity over a 162 aa overlap with a predicted ORF
(ORF 921.ng) from N. gonorrhoeae:
TABLE-US-03301 m921/g921 10 20 30 40 50 60 m921.pep
MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKGFRLASSHWTDVAKISD
|||||||||||||||||||||||||||||||||||||||||||||||| |||:||||||| g921
MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKGFRLAPSHWADVAKISD 10 20
30 40 50 60 70 80 90 100 110 120 m921.pep
EATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYEIYLRSAIDSQRGAINTEQ
||||||||||||||||||||||||||||||||||||||||||||||||:||||| ||||| g921
EATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYEIYLRSAVDSQRGEINTEQ 70 80
90 100 110 120 130 140 150 160 m921.pep
SKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQPLKX
|||||:||||||||||||||:||:||||||||||||||||||| g921
SKLYIENALRGWQQRWKNMDAKPDNPAFTNFLMEVMKMQPLKX 130 140 150 160
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2811>:
TABLE-US-03302 a921.seq 1 ATGAAAAAAT ACCTTATCCC TCTTTCCATT
GTGGCAGTTC TTTCCGGCTG 51 CCAGTCTATT TATGTGCCCA CATTGACGGA
AATCCCCGTG AATCCTATCA 101 ATACCGTCAA AACGGAAGCA CCTGCAAAAG
GTTTCCGCCT TGCCTCTTCG 151 CATTGGACGG ATGTTGCCAA AATCAGCGAT
GAAGCGACGC GCTTGGGCTA 201 TCAGGTGGGT ATCGGTAAAA TGACCAAGGT
TCAGGCGGCG CAATATCTGA 251 ACAACTTCAG AAAACGCCTG GTCGGACGCA
ATGCCGTCGA TGACAGTATG 301 TATGAAATCT ACCTGCGTTC GGCGATAGAC
AGCCAGCGGG GCGCAATCAA 351 TACGGAACAG TCCAAGCTGT ATATCCAGAA
TGCCTTGCGC GGCTGGCAGC 401 AGCGTTGGAA AAATATGGAT GTCAAACCCA
ACAACCCCGC ATTTACCAAC 451 TTTTTGATGG AAGTGATGAA GATGCAGCCC
TTGAAATGA
This corresponds to the amino acid sequence <SEQ ID 2812; ORF
921.a>:
TABLE-US-03303 a921.pep 1 MKKYLIPLSI VAVLSGCQSI YVPTLTEIPV
NPINTVKTEA PAKGFRLASS 51 HWTDVAKISD EATRLGYQVG IGKMTKVQAA
QYLNNFRKRL VGRNAVDDSM 101 YEIYLRSAID SQRGAINTEQ SKLYIQNALR
GWQQRWKNMD VKPNNPAFTN 151 FLMEVMKMQP LK* m921/a921 99.4% identity
in 162 aa overlap 10 20 30 40 50 60 m921.pep
MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKGFRLASSHWTDVAKISD
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| a921
MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKGFRLASSHWTDVAKISD 10 20
30 40 50 60 70 80 90 100 110 120 m921.pep
EATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYEIYLRSAIDSQRGAINTEQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a921
EATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYEIYLRSAIDSQRGAINTEQ 70 80
90 100 110 120 130 140 150 160 m921.pep
SKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQPLKX
||||||||||||||||||||||||||||||||||||||||||| a921
SKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQPLKX 130 140 150 160
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2813>:
TABLE-US-03304 g922.seq 1 ATGGAAAAGA GAAAAATACT GCCGCTGGCA
ATTTGTTTGG CGGCTTTGTC 51 TGCCTGTACG GCGATGGAGG CCCGCACACC
CCGGGCAAAT GAAGCCCAAG 101 CCCCCCGCGC GGATGAAATG AAAAAAGAAA
GCCGCCCCGC GTTTGACGCG 151 GCAGCCGTAC CGGTATCCGA CAGCGGGTTT
GCCGCCAATG CAAATGTCCG 201 CCGTTTTGTG GACGATGAAG TCGGGAAAGG
GGATTTTTCC CAGGCGGAAT 251 GGCAGGATTT TTTTGACAAA GCGGCTTACA
AGGCGGACAT CGTCAAGATt 301 ATGCACCGAC CCTCCACATC GCGtCCGTGG
TATGtgttcc gCacggGAAa 351 ttcGGgcagg gcgaaAtttc ACggcgCGCG
Caggttttat GcggaaAacc 401 gcgcggttat cgatgatgtg gcgCAAAAat
acggcgtGCC TGCCGAGCTT 451 ATCGTGGCGA TTATCGGGAT TGAAACGAAT
TACGGCAAAA ATACGGGCAG 501 TTTCCGTGTG GCGGACGCAT TGGCGACTTT
AGGCTTTGAT TATCCCCGCC 551 GCGCCGGGTT TTTCCAAAAA GAATTGGTCG
AGCTTTTAAA GCTGGCAAAA 601 GAAGAAGGCG GTGATGTTTT CGCCTTTAAG
GGCagcTATG CGGGTGCAAT 651 GGGTATGCCG CAATTTATGC CTTCGAGCTA
CCGGAAATGG GCGGTGGATT 701 ATGAcgggga cggacatCGG GATATAtggg
GCAACGTcgg tgatgtcgcg 751 gcatcggTTG CCAATTAtat gaagCAGCAC
GGTTGGCGCA CgggcggtAA 801 AATGTTGGTG TCGGCGAcgt tggcgccggg
tgcggATGTT CAggcAATCA 851 TTGGCGAAAA AACCGCCCTG ACGCGGACGG
TGGCGGATTT GAaggCGTAc 901 ggcatcatcc ccggggaaaC GCTCGCAGAT
GATGAAAAGg cgGTTTTGTT 951 CAAACTGGAA ACCGCACCCG GCGTGTTTGA
ATATTATTTG GGCTTGAACA 1001 ATTTTTATAC GGTATGGCAG TACAACCACA
GCCGGATGTA TGTAACGgcg 1051 gtcaggGACA TTGCCAATTC GCTCGGCGGC
CCGGGATTGT Aa
This corresponds to the amino acid sequence <SEQ ID 2814; ORF
922.ng>:
TABLE-US-03305 g922.pep 1 MEKRKILPLA ICLAALSACT AMEARTPRAN
EAQAPRADEM KKESRPAFDA 51 AAVPVSDSGF AANANVRRFV DDEVGKGDFS
QAEWQDFFDK AAYKADIVKI 101 MHRPSTSRPW YVFRTGNSGR AKFHGARRFY
AENRAVIDDV AQKYGVPAEL 151 IVAIIGIETN YGKNTGSFRV ADALATLGFD
YPRRAGFFQK ELVELLKLAK 201 EEGGDVFAFK GSYAGAMGMP QFMPSSYRKW
AVDYDGDGHR DIWGNVGDVA 251 ASVANYMKQH GWRTGGKMLV SATLAPGADV
QAIIGEKTAL TRTVADLKAY 301 GIIPGETLAD DEKAVLFKLE TAPGVFEYYL
GLNNFYTVWQ YNHSRMYVTA 351 VRDIANSLGG PGL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2815>:
TABLE-US-03306 m922.seq 1 ATGAAAAAGA GAAAAATACT GCCGCTGGCA
ATTTGTTTGG CGGCTTTGTC 51 TGCCTGTACG GCGATGGAGG CACGCCCACC
CCGGGCAAAT GAAGCCCAAG 101 CCCCCCGCGC GGTTGAAATG AAAAAAGAAA
GCCGCCCCGC GTTTGACGCG 151 GCAGCCGTAT TTGACGCGGC AGCCGTACCG
GTATCCGACA GCGGGTTTGC 201 CGCCAATGCA AATGTCCGCC GTTTTGTGGA
CGATGAAGTC GGGAAAGGGG 251 ATTTTTCCCG GGCGGAATGG CAGGATTTTT
TTGACAAAGC GGCTTACAAG 301 GCGGACATCG TCAAGATTAT GCACCGCCCC
TCCACATCGC GTCCGTGGTA 351 TGTGTTCCGC ACGGGAAATT CGGGCAAGGC
GAAATTTCGC GGCGCGCGCC 401 GGTTTTATGC GGAAAACCGC GCGCTTATCG
ATGATGTGGC GCAAAAATAC 451 GGCGTGCCTG CCGAACTTAT CGTGGCGGTT
ATCGGGATTG AAACGAATTA 501 CGGCAAAAAT ACGGGCAGTT TCCGTGTGGC
GGACGCATTG GCGACCTTAG 551 GCTTTGATTA CCCCCGCCGC GCCGGGTTTT
TCCAAAAAGA ATTGGTCGAG 601 CTTTTAAAGC TGGCAAAAGA AGAAGGCGGC
GATGTTTTCG CCTTTAAAGG 651 CAGCTATGCG GGCGCAATGG GGATGCCGCA
ATTTATGCCT TCGAGCTACC 701 GGAAATGGGC GGTGGATTAT GACGGGGACG
GACATCGGGA CATATGGGGC 751 AACGTCGGCG ATGTCGCGGC ATCGGTTGCC
AATTATATGA AGCAGCACGG 801 TTGGCGCACG GGCGGGAAAA TGCTGGTGTC
TGCAACATTG GCGCCGGGTG 851 CGGATGTTCA GGCAATCATT GGCGAAAAAA
CCGCCCTGAC GCGGACGGTG 901 GCGGATTTGA AGGCGTACGG CATCATCCCC
GGCGAAGAGC TTGCAGATGA 951 TGAAAAGGCG GTTTTGTTCA AACTGGAAAC
CGCACCGGGC GTGTTTGAAT 1001 ATTATTTGGG CTTGAACAAT TTTTATACGG
TATGGCAGTA CAACCACAGC 1051 CGGATGTATG TAACGGCGGT CAGGGACATT
GCCAATTCGC TTGGCGGCCC 1101 GGGATTGTAA
This corresponds to the amino acid sequence <SEQ ID 2816; ORF
922>:
TABLE-US-03307 m922.pep 1 MKKRKILPLA ICLAALSACT AMEARPPRAN
EAQAPRAVEM KKESRPAFDA 51 AAVFDAAAVP VSDSGFAANA NVRRFVDDEV
GKGDFSRAEW QDFFDKAAYK 101 ADIVKIMHRP STSRPWYVFR TGNSGKAKFR
GARRFYAENR ALIDDVAQKY 151 GVPAELIVAV IGIETNYGKN TGSFRVADAL
ATLGFDYPRR AGFFQKELVE 201 LLKLAKEEGG DVFAFKGSYA GAMGMPQFMP
SSYRKWAVDY DGDGHRDIWG 251 NVGDVAASVA NYMKQHGWRT GGKMLVSATL
APGADVQAII GEKTALTRTV 301 ADLKAYGIIP GEELADDEKA VLFKLETAPG
VFEYYLGLNN FYTVWQYNHS 351 RMYVTAVRDI ANSLGGPGL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 922
shows 95.9% identity over a 369 aa overlap with a predicted ORF
(ORF 922.ng) from N. gonorrhoeae:
TABLE-US-03308 m922/g922 10 20 30 40 50 60 m922.pep
MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRAVEMKKESRPAFDAAAVFDAAAVP
|:||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| g922
MEKRKILPLAICLAALSACTAMEARTPRANEAQAPRADEMKKESRPAFDAA------AVP 10 20
30 40 50 70 80 90 100 110 120 m922.pep
VSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMHRPSTSRPWYVFR
||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||| g922
VSDSGFAANANVRRFVDDEVGKGDFSQAEWQDFFDKAAYKADIVKIMHRPSTSRPWYVFR 60 70
80 90 100 110 130 140 150 160 170 180 m922.pep
TGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETNYGKNTGSFRVADAL
|||||:|||:|||||||||||:|||||||||||||||||:|||||||||||||||||||| g922
TGNSGRAKFHGARRFYAENRAVIDDVAQKYGVPAELIVAIIGIETNYGKNTGSFRVADAL 120
130 140 150 160 170 190 200 210 220 230 240 m922.pep
ATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMGMPQFMPSSYRKWAVDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g922
ATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMGMPQFMPSSYRKWAVDY 180
190 200 210 220 230 250 260 270 280 290 300 m922.pep
DGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAPGADVQAIIGEKTALTRTV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g922
DGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAPGADVQAIIGEKTALTRTV 240
250 260 270 280 290 310 320 330 340 350 360 m922.pep
ADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNNFYTVWQYNHSRMYVTAVRDI
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| g922
ADLKAYGIIPGETLADDEKAVLFKLETAPGVFEYYLGLNNFYTVWQYNHSRMYVTAVRDI 300
310 320 330 340 350 370 m922.pep ANSLGGPGLX |||||||||| g922
ANSLGGPGLX 360
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2817>:
TABLE-US-03309 a922.seq 1 ATGAAAAACA GAAAAATACT GCCGCTGGCA
ATTTGTTTGG CGGCTTTGTC 51 TGCCTGTACG GCGATGGAGG CACGCCCGCC
CCGGGCAAAT GAAGCCCAAG 101 CCCCCCGCGC GGATGAAATG AAAAAAGAAA
GCCGCCCCGC GTTTGACGCG 151 GCAGCCGTAT TTGACGCGGC AGCCGTACCG
GTATCCGACA GCGGGTTTGC 201 CGCCAATGCA AATGTCCGCC GTTTTGTGGA
CGATGAAGTC GGGAAAGGGG 251 ATTTTTCCCG GGCGGAATGG CAGGATTTTT
TTGACAAAGC GGCTTACAAG 301 GCGGACATCG TCAAGATTAT GCACCGCCCC
TCCACATCGC GTCCGTGGTA 351 TGTGTTCCGC ACGGGAAATT CGGGCAAGGC
GAAATTTCGC GGCGCGCGCC 401 GGTTTTATGC GGAAAACCGC GCGCTTATCG
ATGATGTGGC GCAAAAATAC 451 GGCGTGCCTG CCGAACTTAT CGTGGCGGTT
ATCGGGATTG AAACGAATTA 501 CGGCAAAAAT ACGGGCAGTT TCCGTGTGGC
GGACGCATTG GCGACCTTAG 551 GCTTTGATTA CCCCCGCCGC GCCGGGTTTT
TCCAAAAAGA ATTGGTCGAG 601 CTTTTAAAGC TGGCAAAAGA AGAAGGCGGC
GATGTTTTCG CCTTTAAAGG 651 CAGCTATGCG GGCGCAATGG GGATGCCGCA
ATTTATGCCT TCGAGCTACC 701 GGAAATGGGC GGTGGATTAT GACGGGGACG
GACATCGGGA CATATGGGGC 751 AATGTTGGCG ATGTCGCGGC ATCGATTGCC
AATTATATGA AGCAGCACGG 801 TTGGCGCACG GGCGGGAAAA TACTGGTGTC
TGCAACATTG GCGCCGGGTG 851 CGGATGTTCA GGCAATCATT GGCGAAAAAA
CCGCCCTGAC GCGGACGGTG 901 GCGGATTTGA AGGCGTACGG CATCATCCCC
GGCGAAGAGC TTGCCGATGA 951 TGAAAAGGCG GTTTTGTTCA AACTGGAAAC
CGCACCCGGC GTGTTTGAAT 1001 ATTATTTGGG CTTGAACAAT TTTTATACGG
TATGGCAGTA CAATCACAGT 1051 CGGATGTATG TAACGGCGGT CAGGGACATT
GCCAATTCGC TTGGCGGCCC 1101 GGGATTGTAA
This corresponds to the amino acid sequence <SEQ ID 2818; ORF
922.a>:
TABLE-US-03310 a922.pep 1 MKNRKILPLA ICLAALSACT AMEARPPRAN
EAQAPRADEM KKESRPAFDA 51 AAVFDAAAVP VSDSGFAANA NVRRFVDDEV
GKGDFSRAEW QDFFDKAAYK 101 ADIVKIMHRP STSRPWYVFR TGNSGKAKFR
GARRFYAENR ALIDDVAQKY 151 GVPAELIVAV IGIETNYGKN TGSFRVADAL
ATLGFDYPRR AGFFQKELVE 201 LLKLAKEEGG DVFAFKGSYA GAMGMPQFMP
SSYRKWAVDY DGDGHRDIWG 251 NVGDVAASIA NYMKQHGWRT GGKILVSATL
APGADVQAII GEKTALTRTV 301 ADLKAYGIIP GEELADDEKA VLFKLETAPG
VFEYYLGLNN FYTVWQYNHS 351 RMYVTAVRDI ANSLGGPGL* m922/a922 98.9%
identity in 369 aa overlap 10 20 30 40 50 60 m922.pep
MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRAVEMKKESRPAFDAAAVFDAAAVP
||:|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| a922
MKNRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKESRPAFDAAAVFDAAAVP 10 20
30 40 50 60 70 80 90 100 110 120 m922.pep
VSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMHRPSTSRPWYVFR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a922
VSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMHRPSTSRPWYVFR 70 80
90 100 110 120 130 140 150 160 170 180 m922.pep
TGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETNYGKNTGSFRVADAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a922
TGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETNYGKNTGSFRVADAL 130
140 150 160 170 180 190 200 210 220 230 240 m922.pep
ATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMGMPQFMPSSYRKWAVDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a922
ATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMGMPQFMPSSYRKWAVDY 190
200 210 220 230 240 250 260 270 280 290 300 m922.pep
DGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAPGADVQAIIGEKTALTRTV
||||||||||||||||||:||||||||||||||:|||||||||||||||||||||||||| a922
DGDGHRDIWGNVGDVAASIANYMKQHGWRTGGKILVSATLAPGADVQAIIGEKTALTRTV 250
260 270 280 290 300 310 320 330 340 350 360 m922.pep
ADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNNFYTVWQYNHSRMYVTAVRDI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a922
ADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNNFYIVWQYNHSRMYVTAVRDI 310
320 330 340 350 360 370 m922.pep ANSLGGPGLX |||||||||| a922
ANSLGGPGLX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2819>:
TABLE-US-03311 g923.seq 1 ATGAAGCGGC AGGCTTTCTT CAAACCGATG
GCGTGTGCGG CATTTCTGTC 51 CGCCGTTTCG CTGCGCCTCC CCGTATTGGG
CGCGTGTTAC GCAATATTGT 101 CCCTCTATGC GTTTGCACTT TACGGCATCG
ACAAACGGCG TGCCGTGCGG 151 GGAAAACGCC GCATTCCCGA ACACCGCCTG
CTCCTGCCTG CCTTGTTCGG 201 CGGTTGGACG GGCGCATACT TGGGTAGTAG
GATGTTCAGG CATAAAACGG 251 CGAAAAAGCG TTTTGTTGTG CTGTTCCGTC
TGACTGTTTC GGGCAATGTC 301 CTGGCGACCT GCATCCTGAT TGATTATTTC
GTTCCGCCCG AACTTTTTGT 351 AAAACTCGGG CAACATCTCT GA
This corresponds to the amino acid sequence <SEQ ID 2820; ORF
923.ng>:
TABLE-US-03312 g923.pep 1 MKRQAFFKPM ACAAFLSAVS LRLPVLGACY
AILSLYAFAL YGIDKRRAVR 51 GKRRIPEHRL LLPALFGGWT GAYLGSRMFR
HKTAKKRFVV LFRLTVSGNV 101 LATCILIDYF VPPELFVKLG QHL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2821>:
TABLE-US-03313 m923.seq 1 ATGAAGCGGC AGGCTTTCTT CAAACTGATG
GCGTGTGCGG CATTTCTGTC 51 TGCCGTTTCG CTGCGCCTCC CCGTATTGGG
CGCGTGTTAC GCAATATTGT 101 CCCTCTATGC GTTTGCACTT TACGGCATCG
ACAAACGGTG CGCCATACGG 151 GGGCAACGCC GCATTCCCGA ACACCGCCTG
CTGCTGCCTG CATTGCTCGG 201 CGGCTGGGTG GGCGCGTATT TCGGCAGCAT
GACATTCAAA CATAAGACAG 251 CGAAAAAGCG TTTTGTTGTG CTGTTCCGTC
TGACTGTTTC AGGTAATGTC 301 TTGGCGACCC TCATCCTGAT TTATAGTGGA
TTAAATTTAA ACCAGTACGG 351 CGTTGCCTCG CCTTGCCGTA CTATTTGTAC
TGTCTGCGGC TTCGTCGCCT 401 TGTCCTGATT TTTGTTAATC CACTATAT.T
ATTTTGTCCC GCCTGAATTT 451 TTCGTAAAAC TCGGGCAGAA TACCTGA
This corresponds to the amino acid sequence <SEQ ID 2822; ORF
923>:
TABLE-US-03314 m923.pep 1 MKRQAFFKLM ACAAFLSAVS LRLPVLGACY
AILSLYAFAL YGIDKRCAIR 51 GQRRIPEHRL LLPALLGGWV GAYFGSMTFK
HKTAKKRFVV LFRLTVSGNV 101 LATLILIYSG LNLNQYGVAS PCRTICTVCG
FVALS*FLLI HYXYFVPPEF 151 FVKLGQNT*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 923
shows 68.8% identity over a 157 aa overlap with a predicted ORF
(ORF 923.ng) from N. gonorrhoeae:
TABLE-US-03315 g923/m923 10 20 30 40 50 60 g923.pep
MKRQAFFKPMACAAFLSAVSLRLPVLGACYAILSLYAFALYGIDKRRAVRGKRRIPEHRL
|||||||| ||||||||||||||||||||||||||||||||||||| |:||:|||||||| m923
MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGIDKRCAIRGQRRIPEHRL 10 20
30 40 50 60 70 80 90 100 g923.pep
LLPALFGGWTGAYLGSRMFRHKTAKKRFVVLFRLTVSGNVLATCILID------------
|||||:|||:|||:|| |:||||||||||||||||||||||| ||| m923
LLPALLGGWVGAYFGSMTFKHKTAKKRFVVLFRLTVSGNVLATLILIYSGLNLNQYGVAS 70 80
90 100 110 120 110 120 g923.pep ------------------YFVPPELFVKLGQHLX
||||||:||||||: m923 PCRTICTVCGFVALSXFLLIHYIYFVPPEFFVKLGQNTX 130 140
150
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2823>:
TABLE-US-03316 a923.seq 1 ATGAAGCGGC AGGCTTTCTT CAAACTGATG
GCGTGTGCGG CATTTCTGTC 51 TGCCGTTTCG CTGCGCCTCC CCGTATTGGG
CGCGTGTTAC GCAATATTGT 101 CCCTCTATGC GTTTGCACTT TACGGCATCG
ACAAACGGCG TGCCGTGCGG 151 GGAAAACGCC GCATTCCCGA ACACCGCCTG
CTGCTGCCTG CCTTGTTCGG 201 CGGTTGGGCG GGCGCATACT TGGGCAGCAG
GATATTCAGG CATAAAACGG 251 CGAAAAAGCG TTTTGTTGTG CTGTTCCGTC
TGACTGTTTC GGGCAATGTC 301 CTGGCGACCC TCATCCTGAT TTATAGTGGA
TTAAATTTAA ACCAGTACGG 351 CGTTGCCTCG CCTTA.GCTC AAAGAGAACG
ATTCTCTAAG GTGCTGAAGC 401 ACCAAGTGAA TCGGTTCCGT ACTATTTGTA
CTGTCTGCGG CTTCGTCGCC 451 TTGTCCTGAT TTTTGTTAAT CCACTAT.AT
TATTTTGTCC CGCCTGAATT 501 TTTCGTAAAA CTCGGGCAGA ATACCTGA
This corresponds to the amino acid sequence <SEQ ID 2824; ORF
923.a>:
TABLE-US-03317 a923.pep 1 MKRQAFFKLM ACAAFLSAVS LRLPVLGACY
AILSLYAFAL YGIDKRRAVR 51 GKRRIPEHRL LLPALFGGWA GAYLGSRIFR
HKTAKKRFVV LFRLTVSGNV 101 LATLILIYSG LNLNQYGVAS PXAQRERFSK
VLKHQVNRFR TICTVCGFVA 151 LS*FLLIHYX YFVPPEFFVK LGQNT* m923/a923
84.6% identity in 175 aa overlap 10 20 30 40 50 60 m923.pep
MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGIDKRCAIRGQRRIPEHRL
|||||||||||||||||||||||||||||||||||||||||||||| |:||:|||||||| a923
MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGIDKRRAVRGKRRIPEHRL 10 20
30 40 50 60 70 80 90 100 110 120 m923.pep
LLPALLGGWVGAYFGSMTFKHKTAKKRFVVLFRLTVSGNVLATLILIYSGLNLNQYGVAS
|||||:|||:|||:|| |:|||||||||||||||||||||||||||||||||||||||| a923
LLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLATLILIYSGLNLNQYGVAS 70 80
90 100 110 120 130 140 150 159 m923.pep
PC-----------------RTICTVCGFVALSXFLLIHYXYFVPPEFFVKLGQNTX |
||||||||||||||||||||||||||||||||||||| a923
PXAQRERFSKVLKHQVNRFRTICTVCGFVALSXFLLIHYXYFVPPEFFVKLGQNTX 130 140
150 160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2825>:
TABLE-US-03318 g925.seq 1 ATGAAACAAA TGCTTTTGGC cgtcggcgtg
ggcGCGGTGT TGGCGGGCTG 51 CGGCAaggat gcCGGCGGtt acgagggtTA
TTGGCGCGAA AAGTCGGACA 101 AAAAagaggG CGTGATTGCC GTCAAAAAAA
AAGGCAATTA CTTCCTTAAT 151 AAAATCAACG TGTTTACAGG CAAGGAGGAG
TCTTTGCTTT TGTCTGAAAA 201 AGACGGCGCG CTTTCGATAA ACACGGGGAT
AGGGGAAATC CCGATCAAAC 251 TTTCCGACGA CGGGAAAGAG CTGTATGTCG
AACGCAGGCG GTATGTGAAA 301 ACCGATGCGG CGATGAAGGA CAAAATCATC
GCCCACCAGA AAAAGTGCGG 351 ACAAACGGCA CAGGCATACC TCGACGCGCG
AAATGCGTTG CCGTCAAACC 401 AAACGTATCA GCAGCGTCAG GCGGCGATCG
AGCAATTGAA ACGGCGGTTT 451 GAAGCCGAGT TTGACGAATT GGAAAAAGAA
ATCAAATGCA ACGGCAAACC 501 GACATTGTTG TTTTAG
This corresponds to the amino acid sequence <SEQ ID 2826; ORF
925.ng>:
TABLE-US-03319 g925.pep 1 MKQMLLAVGV GAVLAGCGKD AGGYEGYWRE
KSDKKEGVIA VKKKGNYFLN 51 KINVFTGKEE SLLLSEKDGA LSINTGIGEI
PIKLSDDGKE LYVERRRYVK 101 TDAAMKDKII AHQKKCGQTA QAYLDARNAL
PSNQTYQQRQ AAIEQLKRRF 151 EAEFDELEKE IKCNGKPTLL F*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2827>:
TABLE-US-03320 m925.seq (partial) 1 ATGAAACAAA TGCTTTTAGC
CGTCGGCGTG GTGGCGGTGT TGGCGGGCTG 51 CGGCAAGGAT GCCGGCGGTT
ACGAGGGTTA TTGGCGCGAA AAGTCGGACA 101 AAAAAGAGGG TATGATTGCC
GTCAAAAAAG AAAAAGGCAA TTACTTCCTT .......
This corresponds to the amino acid sequence <SEQ ID 2828; ORF
925>:
TABLE-US-03321 m925.pep (partial) 1 MKQMLLAVGV VAVLAGCGKD
AGGYEGYWRE KSDKKEGMIA VKKEKGNYFL..
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 925
shows 94.0% identity over a 50 aa overlap with a predicted ORF (ORF
925.ng) from N. gonorrhoeae:
TABLE-US-03322 m925/g925 10 20 30 40 50 m925.pep
MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKEKGNYFL ||||||||||
||||||||||||||||||||||||||:||||| |||||| g925
MKQMLLAVGVGAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKK-KGNYFLNKINVFTGKE 10 20
30 40 50 g925
ESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRRYVKIDAAMKDKIIAHQKKCGQT 60 70
80 90 100 110
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2829>:
TABLE-US-03323 g925-1.seq 1 ATGAAACAAA TGCTTTTGGC CGTCGGCGTG
GCGGCGGTGT TGGCGGGCTG 51 CGGCAAGGAT GCCGGCGGTT ACGAGGGTTA
TTGGCGCGAA AAGTCGGACA 101 AAAAAGAGGG CGTGATTGCC GTCAAAAAAA
AAGGCAATTA CTTCCTTAAT 151 AAAATCAACG TGTTTACAGG CAAGGAGGAG
TCTTTGCTTT TGTCTGAAAA 201 AGACGGCGCG CTTTCGATAA ACACGGGGAT
AGGGGAAATC CCGATCAAAC 251 TTTCCGACGA CGGGAAAGAG CTGTATGTCG
AACGCAGGCG GTATGTGAAA 301 ACCGATGCGG CGATGAAGGA CAAAATCATC
GCCCACCAGA AAAAGTGCGG 351 ACAAACGGCA CAGGCATACC TCGACGCGCG
AAATGCGTTG CCGTCAAACC 401 AAACGTATCA GCAGCGTCAG GCGGCGATCG
AGCAATTGAA ACGGCGGTTT 451 GAAGCCGAGT TTGACGAATT GGAAAAAGAA
ATCAAATGCA ACGGCAAACC 501 GACATTGTTG TTTTAG
This corresponds to the amino acid sequence <SEQ ID 2830; ORF
925-1.ng>:
TABLE-US-03324 g925-1.pep 1 MKQMLLAVGV AAVLAGCGKD AGGYEGYWRE
KSDKKEGVIA VKKKGNYFLN 51 KINVFTGKEE SLLLSEKDGA LSINTGIGEI
PIKLSDDGKE LYVERRRYVK 101 TDAAMKDKII AHQKKCGQTA QAYLDARNAL
PSNQTYQQRQ AAIEQLKRRF 151 EAEFDELEKE IKCNGKPTLL F*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2831>:
TABLE-US-03325 m925-1.seq 1 ATGAAACAAA TGCTTTTAGC CGTCGGCGTG
GTGGCGGTGT TGGCGGGCTG 51 CGGCAAGGAT GCCGGCGGTT ACGAGGGTTA
TTGGCGCGAA AAGTCGGACA 101 AAAAAGAGGG TATGATTGCC GTCAAAAAAG
AAAAAGGCAA TTACTTCCTT 151 AATAAAATCC ACGTGGTTAC AGGCAAGGAA
GAGTCCTTGC TTTTGTCTGA 201 AAAAGACGGC GCGCTTTCGA TAAACACAGG
GATAGGGGAA ATCCCGATCA 251 AACTTTCCGA CGACGGGAAA GAGCTGTATG
TCGAACGTAG GCAGTATGTC 301 AAAACCGATG CGGCGATGAA GGACAAAATC
ATCGCCCATC AGAAAAAGTG 351 CGGACAAACA GCACAGGCAT ACCGCGACGC
GCGAAATGCG TTGCCGTCAA 401 ACCAGACGTA TCAGCAGCAT CTGGCGGCGA
TCGAGCAATT GAAACGGCGG 451 TTTGAAGCCG AGTTTGACGA ATTGGAAAAA
GAAATCAAAT GCAACGGCAG 501 AAGCCCGGCA TTGTTGCTTT AG
This corresponds to the amino acid sequence <SEQ ID 2832; ORF
925-1>:
TABLE-US-03326 m925-1.pep.. 1 MKQMLLAVGV VAVLAGCGKD AGGYEGYWRE
KSDKKEGMIA VKKEKGNYFL 51 NKIHVVTGKE ESLLLSEKDG ALSINTGIGE
IPIKLSDDGK ELYVERRQYV 101 KTDAAMKDKI IAHQKKCGQT AQAYRDARNA
LPSNQTYQQH LAAIEQLKRR 151 FEAEFDELEK EIKCNGRSPA LLL* m925/g925
92.5% identity in 173 aa overlap 10 20 30 40 50 60 m925-1.pep
MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKEKGNYFLNKIHVVTGKE
||||||||||:||||||||||||||||||||||||||:||||| |||||||||:| |||| g925-1
MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKK-KGNYFLNKINVFTGKE 10 20
30 40 50 70 80 90 100 110 120 m925-1.pep
ESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKTDAAMKDKIIAHQKKCGQT
|||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||| g925-1
ESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRRYVKTDAAMKDKIIAHQKKCGQT 60 70
80 90 100 110 130 140 150 160 170 m925-1.pep
AQAYRDARNALPSNQTYQQHLAAIEQLKRRFEAEFDELEKEIKCNGRSPALLLX ||||
||||||||||||||: |||||||||||||||||||||||||: |:||:| g925-1
AQAYLDARNALPSNQTYQQRQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLFX 120 130 140
150 160 170
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2833>:
TABLE-US-03327 a925-1.seq 1 AATAAAATCA ACGTGTTTAC AGGTAAGGAA
GAATCTATGC TTTTGTCTGA 51 AAAAGACGGC GCGCTTTCGA TAAACACGGG
GATAGGGGAA ATCCCGATCA 101 AACTTTCCGA CGACGGGAAA GAGCTGTATG
TCGAACGCAG GCAGTATGTC 151 AAAACCGATG CGGCGATGAA GGACAAAATC
ATCGCCCATC AGAAAAAGTG 201 CGGACAAACG GCACAGGCAT ATCTCGACGC
GCGAAATGCG TTGCCGTCAA 251 ACCAGACGTA TCAGCAGCAT CAGGCGGCGA
TCGAGCAGTT GAAACGGCGG 301 TTTGAAGCCG AGTTTGACGA ATTGGAAAAA
GAAATCAAAT GCAACGGCAA 351 ACCGACATTG TTGTTTTAG
This corresponds to the amino acid sequence <SEQ ID 2834; ORF
925-1.a>:
TABLE-US-03328 a925-1.pep 1 NKINVFTGKE ESMLLSEKDG ALSINTGIGE
IPIKLSDDGK ELYVERRQYV 51 KTDAAMKDKI IAHQKKCGQT AQAYLDARNA
LPSNQTYQQH QAAIEQLKRR 101 FEAEFDELEK EIKCNGKPTL LF* a925-1/m925-1
92.7% identity in 123 aa overlap 10 20 30 a925-1.pep
NKINVFTGKEESMLLSEKDGALSINTGIGE |||:| ||||||:|||||||||||||||||
m925-1 AGGYEGYWREKSDKKEGMIAVKKEKGNYFLNKIHVVTGKEESLLLSEKDGALSINTGIGE
30 40 50 60 70 80 40 50 60 70 80 90 a925-1.pep
IPIKLSDDGKELYVERRQYVKTDAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQH
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| m925-1
IPIKLSDDGKELYVERRQYVKTDAAMKDKIIAHQKKCGQTAQAYRDARNALPSNQTYQQH 90 100
110 120 130 140 100 110 120 a925-1.pep
QAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLFX |||||||||||||||||||||||||:
|:||:| m925-1 LAAIEQLKRRFEAEFDELEKEIKCNGRSPALLLX 150 160 170
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2835>:
TABLE-US-03329 g926.seq (partial) 1 ATGAAACACA CCGTATCCGC
ATCGGTCATC CTGCTTTTGA CCGCTTGCGC 51 GCAATTACCT CAAAATAACG
AAAACCTGTG GCAGCCGTCC GAACACATCA 101 GCAGTTTTGC AGCGGAAGGG
CGGTTGGCAG TCAAAGCGGA AGGGAAAGGT 151 TCGTATGCAA ATTTCGATTG
GACATACCAA CCGCCCGTGG AAACCATCAA 201 TATCAACACC CCTTTGGGCA
GTACGCTCGG ACAGTTGTGT CAAGacAGGG 251 ACGGCGCATT GGCAGTGGAC
GGCAAAGGAA ATGTCTATCA GGCAGAGGGT 301 ACGgaagact tGAGCAGGCA
GCTGGTCGGT TTCAAACTGC CAATCCAATA 351 TCTGCATATC TGGGCGGAAG
GCAGGCGTGT GGCGGGCGCG CCTtaccGCA 401 TCCGTTCAGA CGGCATATTG
GAACAATAcg GttggACAAT cgggCagaac 451 tgcCGACAGT GGGGGGCaag
tccgaacgtt gcaactGAa...
This corresponds to the amino acid sequence <SEQ ID 2836; ORF
926.ng>:
TABLE-US-03330 g926.pep (partial) 1 MKHTVSASVI LLLTACAQLP
QNNENLWQPS EHISSFAAEG RLAVKAEGKG 51 SYANFDWTYQ PPVETININT
PLGSTLGQLC QDRDGALAVD GKGNVYQAEG 101 TEDLSRQLVG FKLPIQYLHI
WAEGRRVAGA PYRIRSDGIL EQYGWTIGQN 151 CRQWGASPNV ATE...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2837>:
TABLE-US-03331 m926.seq 1 ATGAAACACA CCGTATCCGC ATCGGTCATC
CTGCTTTTGA CCGCTTGCGC 51 GCAATTACCT CAAAATAACG AAAACCTGTG
GCAGCCGTCC GAACACATCA 101 GCAGTTTTGC AGCAGAAGGG CGGTTGGCAG
TGAAAGCGGA AGGGAAAGGT 151 TCGTATGCAA ATTTCGATTG GACATACCAA
CCGCCCGTGG AAACCATCAA 201 TATCAATACC CCTTTGGGCA GTACGCTCGG
GCAGTTGTGT CAAGACAGGG 251 ACGGCGCATT GGCAGTGGAC GGCAAAGGAA
ATGTCTATCA GGCGGAAAGT 301 GCGGAAGAAT TGAGCAGGCA GCTGGTCGGT
TTCAAACTGC CAATCCAATA 351 TCTGCATATC TGGGCAGATG GCAGGCGTGT
GGCGGGCGCG CCTTACCGCA 401 TCCTGCCGGA CGGCATATTG GAACAATACG
GTTGGACTGT CGGCAGAACC 451 GCCGACAGTG GGGGGCAAGT CCGAACGTTG
CAACTGAATA ACGGAAATTT 501 GAACATCAGG CTGGTTTTCA CCGAAATCGG
TATGCCGTCT GAAACCGAAA 551 CCCCGGAACG CTGTGCGGCG CGCACGAGAT AA
This corresponds to the amino acid sequence <SEQ ID 2838; ORF
926>:
TABLE-US-03332 m926.pep 1 MKHTVSASVI LLLTACAQLP QNNENLWQPS
EHISSFAAEG RLAVKAEGKG 51 SYANFDWTYQ PPVETININT PLGSTLGQLC
QDRDGALAVD GKGNVYQAES 101 AEELSRQLVG FKLPIQYLHI WADGRRVAGA
PYRILPDGIL EQYGWTVGRT 151 ADSGGQVRTL QLNNGNLNIR LVFTEIGMPS
ETETPERCAA RTR* g926/m926 91.6% identity in 155 aa overlap 10 20 30
40 50 60 g926.pep
MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAVKAEGKGSYANFDWTYQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m926
MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAVKAEGKGSYANFDWTYQ 10 20
30 40 50 60 70 80 90 100 110 120 g926.pep
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAEGTEDLSRQLVGFKLPIQYLHI
|||||||||||||||||||||||||||||||||||||||::|:||||||||||||||||| m926
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHI 70 80
90 100 110 120 130 140 150 160 g926.pep
WAEGRRVAGAPYRIRSDGILEQYGWTIGQNCRQWGASPNVATE ||:|||||||||||
||||||||||:|:: : | m926
WADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTLQLNNGNLNIRLVFTEIGMPS 130
140 150 160 170 180 a926.seq 1 ATGAAACACA CTGTATCCGC ATCGGTCATC
CTGCTTTTGA CCGCTTGCGC 51 GCAATTACCT CAAAATAACG AAAACCTGTG
GCAGCCGTCC GAACACACCC 101 GCAGTTTCAC GGCGGAAGGG CGGTTGGCAG
TGAAAGCGGA AGGGAAAGGT 151 TCGTATGCAA ATTTCGATTG GACATACCAA
CCGCCCGTGG AAACCATCAA 201 TATCAACACC CCTTTGGGCA GTACGCTCGG
GCAGTTGTGT CAAGACAGGG 251 ACGGCGCATT GGCAGTGGAC GGCAAAGGAA
ATGTCTATCA GGCGGAAAGT 301 GCGGAAGAAT TGAGCAGGCA GCTGGTCGGT
TTCAAACTGC CAATCCAATA 351 TCTGCATATC TGGGCAGATG GCAGGCCTGT
GGCGGGCGCG CCTTACCGCA 401 TCCTGCCGGA CGGCATATTG GAACAATACG
GTTGGACTGT CGGCAGAACC 451 GCCGACAGTG GGGGGCAAGT CCGAACGTTG
CAACTGAATA ACGGAAATTT 501 GAACATCAGG CTGGTTTTCA CCGAGATTGG
TATGCCGTCT GAAACCGAAA 551 CCCAAGAACA ATGCGCGGCA CGCATACAGT AA
a926.pep 1 MKHTVSASVI LLLTACAQLP QNNENLWQPS EHTRSFTAEG RLAVKAEGKG
51 SYANFDWTYQ PPVETININT PLGSTLGQLC QDRDGALAVD GKGNVYQAES 101
AEELSRQLVG FKLPIQYLHI WADGRPVAGA PYRILPDGIL EQYGWTVGRT 151
ADSGGQVRTL QLNNGNLNIR LVFTEIGMPS ETETQEQCAA RIQ* m926/a926 96.9%
identity in 191 aa overlap 10 20 30 40 50 60 m926.pep
MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAVKAEGKGSYANFDWTYQ
|||||||||||||||||||||||||||||||| ||:||||||||||||||||||||||| a926
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQ 10 20
30 40 50 60 70 80 90 100 110 120 m926.pep
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a926
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHI 70 80
90 100 110 120 130 140 150 160 170 180 m926.pep
WADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTLQLNNGNLNIRVFTEIGMPS |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a926
WADGRPVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTLQLNNGNLNIRLVFTEIGMPS 130
140 150 160 170 180 190 m926.pep ETETPERCAARTRX |||| |:|||| a926
ETETQEQCAARIQX 190
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2839>:
TABLE-US-03333 g927.seq 1 atgaaaacct acGCAcAggC ACTCTATacc
GCAGCCCTGC TCACCGCCTG 51 CAGCCCcgca GCcgatTcaa accaTCCGTC
CGGAcAaAAT GCCCCGGCCA 101 ATACCGAATC cgacGgaaAA AACATtaccC
TGctcaatgc cTcgtacgat 151 gtGACACGGT ATTTttacaa agaatacgac
cacTtgtttg tcggaaCATA 201 CCAATCCGAA CACCCCGGCA CATCCGTCAG
CATCCAACAA TCCCACGGCG 251 GCTTCAGCAA ACAGGCATTA TCCGTAGCCA
ACGGCCTTCA AGCCGATGTC 301 GTAACCATGA ACCAATCTTC CGACATCGAC
CTGCTCGAAA AAAA.GGACT 351 GGTAGAAAAA GGCTGGCAAC AAGCCCTCCC
CGATCACGCC GCACCCTACA 401 CCAGCACTAT GGTTTTCCTT GTCCGAAAAA
ACAACCCcaa ACAGAtccgC 451 GATTGGAACG ACCTTGCCAA AGACGGCGTT
AACATCGTCA TCGCCAAGAC 501 CTCGGGCAAC GGACGCTACG CCTTCCTCGG
CGCATACGGT TACGGTCTGA 551 AAGCCAACAA CGGcaaCGAG CAGGAAGCCC
AAAAACTCGT CGCATCCATC 601 CTCAAAAACA CACCCGTTTT TGAAAACGGC
GGACGCGc.C CGCCGCCACC 651 ACCTTCACAC AACGCAACAT CGGCGACGTA
CTCATCACTT TTGAAAACga 701 agCcaactac gtCAGCAAAA AACTGA
This corresponds to the amino acid sequence <SEQ ID 2840; ORF
927.ng>:
TABLE-US-03334 g927.pep 1 MKTYAQALYT AALLTACSPA ADSNHPSGQN
APANTESDGK NITLLNASYD 51 VTRYFYKEYD HLFVGTYQSE HPGTSVSIQQ
SHGGFSKQAL SVANGLQADV 101 VTMNQSSDID LLEKXGLVEK GWQQALPDHA
APYTSTMVFL VRKNNPKQIR 151 DWNDLAKDGV NIVIAKTSGN GRYAFLGAYG
YGLKANNGNE QEAQKLVASI 201 LKNTPVFENG GRXPPPPPSH NATSATYSSL
LKTKPTTSAK N*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2841>:
TABLE-US-03335 m927.seq 1 ATGAAAACCT ACGCACCGGC ACTCTATACC
GCAGCCCTGC TCACCGCCTG 51 CAGCCCCGCA GCCGATTCAA ACCATCCGTC
CGGACAAAAT GCCCCGGCCA 101 ATACCGAATC CGACGGAAAA AACATTACCC
TGCTCAACGC CTCATACGAT 151 GTGGCACGGG ATTTTTACAA AGAATACAAC
CCCTTATTTA TCAAAACATA 201 CCAATCCGAA CACCCCGGCA CATCCGTCAG
CATCCAACAG TCCCACGGCG 251 GCTCCAGCAA ACAGGCATTA TCCGTAGCCA
ACGGCCTTCA AGCCGATGTC 301 GTAACCATGA ACCAATCCTC CGACATCGAC
CTGCTCGAAA AAAAAGGACT 351 GGTAGAAAAA GGCTGGCAAC AAGCCCTCCC
CGACCACGCC GCGCCCTACA 401 CCAGCACTAT GGTTTTCCTT GTCCGAAAAA
ACAACCCCAA ACAGATCCGC 451 GATTGGAACG ACCTTGCCAA AGACGGCGTT
AACATCGTCA TCGCCAATCC 501 CAAAACCTCG GGCAACGGAC GCTACGCCTT
CCTCGGCGCA TACGGTTACG 551 GTCTGAAAAC CACCAACGGC AACGAACAGG
AAGCCCAAAA ACTCGTCGCA 601 TCCATCCTCA AAAACACCCC CGTTTTTGAA
AACGGCGGAC GCkCgCCACC 651 ACCACCTTCA CACAACGCAA CATCGGCGAC
GTACTCATCA CTTTTGAAAA 701 CGAAGCCAAC TACGTCAGCr AAAAACtGA
This corresponds to the amino acid sequence <SEQ ID 2842; ORF
927>:
TABLE-US-03336 m927.pep 1 MKTYAPALYT AALLTACSPA ADSNHPSGQN
APANTESDGK NITLLNASYD 51 VARDFYKEYN PLFIKTYQSE HPGTSVSIQQ
SHGGSSKQAL SVANGLQADV 101 VTMNQSSDID LLEKKGLVEK GWQQALPDHA
APYTSTMVFL VRKNNPKQIR 151 DWNDLAKDGV NIVIANPKTS GNGRYAFLGA
YGYGLKTTNG NEQEAQKLVA 201 SILKNTPVFE NGGRXPPPPS HNATSATYSS
LLKTKPTTSA KN*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 927
shows 94.2% identity over a 243 aa overlap with a predicted ORF
(ORF 927.ng) from N. gonorrhoeae:
TABLE-US-03337 g927/m927 10 20 30 40 50 60 g927.pep
MKTYAQALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITLLNASYDVTRYFYKEYD |||||
|||||||||||||||||||||||||||||||||||||||||||||:| |||||: m927
MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITLLNASYDVARDFYKEYN 10 20
30 40 50 60 70 80 90 100 110 120 g927.pep
HLFVGTYQSEHPGTSVSIQQSHGGFSKQALSVANGLQADVVTMNQSSDIDLLEKXGLVEK ||:
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| m927
PLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVTMNQSSDIDLLEKKGLVEK 70 80
90 100 110 120 130 140 150 160 170 g927.pep
GWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGVNIVIA--KTSGNGRYAFLGA
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| m927
GWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGVNIVIANPKTSGNGRYAFLGA 130
140 150 160 170 180 180 190 200 210 220 230 g927.pep
YGYGLKANNGNEQEAQKLVASILKNTPVFENGGRXPPPPPSHNATSATYSSLLKTKPTTS
||||||::||||||||||||||||||||||||||||||| |||||||||||||||||||| m927
YGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRXPPPP-SHNATSATYSSLLKTKPTTS 190
200 210 220 230 240 g927.pep AKNX |||| m927 AKNX 240
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2843>:
TABLE-US-03338 a927.seq 1 ATGAAAACCT ACGCACCGGC ACTCTATACC
GCAGCCCTGC TCAGCGCCTG 51 CAGCCCCGCA GCCGATTCAA ACCATCCGTC
CGGACAAAAT GCCCCGGCCA 101 ATACCGAATC CGACGGAAAA AACATTACCC
TGCTCAACGC CTCATACGAT 151 GTGGCACGGG ATTTTTACAA AGAATACAAC
CCCTTATTTA TCAAAACATA 201 CCAATCCGAA CACCCCGGCA CATCCGTCAG
CATCCAACAG TCCCACGGCG 251 GCTCCAGCAA ACAGGCATTA TCCGTAGCCA
ACGGCCTTCA AGCCGATGTC 301 GTAACCATGA ACCAATCCTC CGACATCGAC
CTGCTCGAAA AAAAAGGACT 351 GGTAGAAAAA GGCTGGCAAC AAGCCCTCCC
CGACCACGCC GCGCCCTACA 401 CCAGCACTAT GGTTTTCCTT GTCCGAAAAA
ACAACCCCAA ACAGATCCGC 451 GATTGGAACG ACCTTGCCAA AGACGGCGTT
AACATCGTCA TCGCCAATCC 501 CAAAACCTCG GGCAACGGAC GCTACGCCTT
CCTCGGCGCA TACGGTTACG 551 GTCTGAAAAC CACCAACGGC AACGAACAGG
AAGCCCAAAA ACTCGTCGCA 601 TCCATCCTCA AAAACACCCC CGTTTTTGAA
AACGGCGGAC GCGCGCCACC 651 ACCACCTTCA CACAACGCAA CATCGGCGAC
GTACTCATCA CTTTTGAAAA 701 CGAAGCCAAC TACGTCAGCA AAAAACTGA
This corresponds to the amino acid sequence <SEQ ID 2844; ORF
927.a>:
TABLE-US-03339 a927.pep 1 MKTYAPALYT AALLSACSPA ADSNHPSGQN
APANTESDGK NITLLNASYD 51 VARDFYKEYN PLFIKTYQSE HPGTSVSIQQ
SHGGSSKQAL SVANGLQADV 101 VTMNQSSDID LLEKKGLVEK GWQQALPDHA
APYTSTMVFL VRKNNPKQIR 151 DWNDLAKDGV NIVIANPKTS GNGRYAFLGA
YGYGLKTTNG NEQEAQKLVA 201 SILKNTPVFE NGGRAPPPPS HNATSATYSS
LLKTKPTTSA KN* m927/a927 99.2% identity in 242 aa overlap 10 20 30
40 50 60 m927.pep
MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITLLNASYDVARDFYKEYN
||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||| a927
MKTYAPALYTAALLSACSPAADSNHPSGQNAPANTESDGKNITLLNASYDVARDFYKEYN 10 20
30 40 50 60 70 80 90 100 110 120 m927.pep
PLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVTMNQSSDIDLLEKKGLVEK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a927
PLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVTMNQSSDIDLLEKKGLVEK 70 80
90 100 110 120 130 140 150 160 170 180 m927.pep
GWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGVNIVIANPKTSGNGRYAFLGA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a927
GWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGVNIVIANPKTSGNGRYAFLGA 130
140 150 160 170 180 190 200 210 220 230 240 m927.pep
YGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRXPPPPSHNATSATYSSLLKTKPTTSA
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| a927
YGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAPPPPSHNATSATYSSLLKTKPTTSA 190
200 210 220 230 240 m927.pep KNX ||| a927 KNX
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2845>:
TABLE-US-03340 g929.seq 1 ATGAAATTGG GTTTCAAACC GATACCCCTC
GCCATTGCCG CAGTATTGTG 51 CGCCCTGGTT TTGGCACTGC CCGTACccga
CGGGGTCAAG CCTCAGGCTT 101 GGACGCTGCT GGCTATGTTT GTCGGTGTGA
TTGCCGCCAT TATCGGCAAG 151 GTTATGCCGT TGGGCGCGCT GTCGATTATT
GCCGTCGGGT TGGTCGCAGT 201 AACCGGCGTA ACCGCCGACA AACCGGGCGC
GGCGATGAGC GATGCGTTGA 251 GTGCGTTCGC CAATCCGTTG ATTTGGCTGA
TTGCCATCGC AGTTATGATT 301 TCGCGCGGTT TGCTCAAAAC AGGGCTGGGG
ATGCGTATCG GATATTTGTT 351 TATCGCCGTT TTTGGAAGAA AAAcgctggG
CATCGGTTAC AGTCTCGCTC 401 TTTCCGAACT GCTGCTGGCT CCCGTTACCC
CTTCCAATAC CGCGCGCGGC 451 GGCGGCATTA TACATCcgaT TATGCagtcg
attgCcggCA GttacggctC 501 caatCCCGCA AAAGGCACag aaggcaagat
gggtaAATAT TtggcTTtgg 551 tcaattaTCA TTCcaaTCCC atttcgtcgg
ctAtggctat taCTGcaact 601 gCCCCcaaCC CTTTAATcgt caacttgatt
gccGaaaaTt taggcagtag 651 tttccgtCTT TCttgggggg cgTGGGcgtg
ggcaaTGGCT Gttcccggcg 701 ttatcgcctt TTtcgTTATG CCTTTGATTT
TATATTTTTT GTATCCGCCT 751 GAAATTAAAG AAACGCCCAA TGCTGttcAA
TTTGCCAAAG ACCGTCTGAG 801 CGAGATGGGT AAAATGtcgg CAGACGAAAT
CATTATGGCG GTCATTTTCG 851 GTATCTTGCT GCTGTTGTGG GCAGATGTTC
CCGCCCTTAT TACCGGCAAT 901 CACGCTTTTA GTATCAacgc caccGCCACC
GCATTTATCG GATTAAGCCT 951 GCTTTTGCTT TCCGGTGTAT TGACTTGGGA
CGATGTTTTG AAAGAAAAAA 1001 GCGCGTGGGA TACGATTATT TGGTTTGGCG
CATTGATTAT GATGGCCGCA 1051 TTTTTaAATA AActcggact gattaaatGG
TTCTCCGGAG TGTTGGCGGA 1101 AagtgtcggC GGTTTGGGCG TTAGCGGCAC
GGCTGCGGGC GTAATCCTCG 1151 TGCTTGCtta TATGTATGCG CATTATATGT
TTGCCAGTAC TACTGCACAT 1201 ATTACCGCTA TGTTCGGCGC ATTTCTCGCT
GCTGCCGTTT CACTGAATGC 1251 CCCGGCGATG CCGACTGCGC TGATGATGGC
GGCCGCATCC AACATTATGA 1301 TGACCCTCAC TCATTATGCG ACCGGTACTT
CACCTGTGAT TTTCGGCTCG 1351 GGCTACACCA CAATGGGAGA ATGGTGGAAG
GCGGGTTTTA TCATGAGCGT 1401 AGTCAATTTT CTGATTTTTT CCGTTATCGG
CAGCATTTGG TGGAAAGTTC 1451 TGGGATATTG GTAA
This corresponds to the amino acid sequence <SEQ ID 2846; ORF
929.ng>:
TABLE-US-03341 g929.pep 1 MKLGFKPIPL AIAAVLCALV LALPVPDGVK
PQAWTLLAMF VGVIAAIIGK 51 VMPLGALSII AVGLVAVTGV TADKPGAAMS
DALSAFANPL IWLIAIAVMI 101 SRGLLKTGLG MRIGYLFIAV FGRKTLGIGY
SLALSELLLA PVTPSNTARG 151 GGIIHPIMQS IAGSYGSNPA KGTEGKMGKY
LALVNYHSNP ISSAMAITAT 201 APNPLIVNLI AENLGSSFRL SWGAWAWAMA
VPGVIAFFVM PLILYFLYPP 251 EIKETPNAVQ FAKDRLSEMG KMSADEIIMA
VIFGILLLLW ADVPALITGN 301 HAFSINATAT AFIGLSLLLL SGVLTWDDVL
KEKSAWDTII WFGALIMMAA 351 FLNKLGLIKW FSGVLAESVG GLGVSGTAAG
VILVLAYMYA HYMFASTTAH 401 ITAMFGAFLA AAVSLNAPAM PTALMMAAAS
NIMMTLTHYA TGTSPVIFGS 451 GYTTMGEWWK AGFIMSVVNF LIFSVIGSIW
WKVLGYW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2847>:
TABLE-US-03342 m929.seq 1 ATGAAATTGG GTTTCAAACC GATACCCCTC
GCCATTGCCG CAGTATTGTG 51 CGCCCTGGTT TTGGCACTGC CCGTACCCGA
CGGGGTCAAG CCTCAGGCTT 101 GGACGCTGCT GGCCATGTTT GTCGGTGTGA
TTGCCGCCAT TATCGGCAAG 151 GCCATGCCGT TGGGCGCGCT GTCGATTATT
GCCGTCGGGT TGGTCGCAGT 201 AACCGGCGTA ACCGCCGACA AACCGGGCGC
GGCGATGAGC GATGCGTTGA 251 GTGCGTTCGC CAATCCGTTG ATTTGGCTGA
TTGCCATCGC AGTTATGATT 301 TCGCGCGGTT TGCTCAAAAC AGGGCTGGGG
ATGCGTATCG GATATTTGTT 351 TATCGCCGTT TTTGGAAGAA AAACGCTGGG
CATCGGTTAC AGTCTCGCTC 401 TTTCCGAACT GCTGCTGGCT CCCGTTACCC
CTTCCAATAC CGCGCGCGGC 451 GGCGGCATTA TACATCCGAT TATGCAGTCG
ATTGCCGGCA GTTACGGCTC 501 CAATCCCGCA AAAGGCACAG AAGGCAAGAT
GGGTAAATAT TTGGCTTTGG 551 TCAACTATCA TTCCAATCCC ATTTCGTCGG
CTATGTTTAT TACTGCAACT 601 GCCCCCAACC CTTTAATCGT CAACTTGATT
GCCGAAAATT TAGGCAGTAG 651 TTTCCGTCTT TCTTGGGGGG CGTGGGCGTG
GGCAATGGCT GTTCCCGGCG 701 TTATCGCCTT TTTCGTTATG CCTTTGATTT
TATATTTwyT GTATCCGCCT 751 GAAATTAAAG AAACGCCCAA TGCCGTTCAA
TTTGCCAAAG ACCGTCTGAG 801 GGAGATGGGT AAAATGTCGG CAGACGAAAT
CATTATGGCG GTCATTTTCG 851 GTATCTTGCT GCTGTTGTGG GCAGATGTTC
CCGCCCTTAT TACCGGCAAT 901 CACGCTTTTA GTATCAACGC CACCGCCACC
GCATTTATCG GATTAAGCCT 951 GCTTTTGCTT TCCGGTGTAT TGACTTGGGA
CGATGTTTTG AAAGAAAAAA 1001 GCGCGTGGGA TACGATTATT TGGTTTGGCG
CATTGATTAT GATGGCCGCA 1051 TTTTTAAATA AACTCGGACT GATTAAATGG
TTCTCCGGAG TGTTGGCGGA 1101 AAGTGTCGGC GGTTTGGGCG TTAGCGGCAC
GGCTGCGGGC GTAATCCTCG 1151 TGCTTGCTTA TATGTATGCG CATTATATGT
TTGCCAGTAC TACTGCACAT 1201 ATTACCGCTA TGTTCGGCGC ATTTTTCGCT
GCTGCCGTTT CACTGAATGC 1251 CCCGGCGATG CCGACCGCGC TGATGATGGC
GgCCGCATCC AACATTATGA 1301 TGACCCTCAC TCATTATGCG ACCGGTACTT
CGCCTGTGAT TTTCGGTTCG 1351 GGCTACACCA CAATGGGAGA ATGGTGGAAG
GCGGGTTTTA TCATGAGCGT 1401 AGTCAATTTT CTGATTTTTT TCGTTATCGG
CAGCATTTGG TGGAAAGTTC 1451 TGGGGTATTG GTAA
This corresponds to the amino acid sequence <SEQ ID 2848; ORF
929>:
TABLE-US-03343 m929.pep 1 MKLGFKPIPL AIAAVLCALV LALPVPDGVK
PQAWTLLAMF VGVIAAIIGK 51 AMPLGALSII AVGLVAVTGV TADKPGAAMS
DALSAFANPL IWLIAIAVMI 101 SRGLLKTGLG MRIGYLFIAV FGRKTLGIGY
SLALSELLLA PVTPSNTARG 151 GGIIHPIMQS IAGSYGSNPA KGTEGKMGKY
LALVNYHSNP ISSAMFITAT 201 APNPLIVNLI AENLGSSFRL SWGAWAWAMA
VPGVIAFFVM PLILYXLYPP 251 EIKETPNAVQ FAKDRLREMG KMSADEIIMA
VIFGILLLLW ADVPALITGN 301 HAFSINATAT AFIGLSLLLL SGVLTWDDVL
KEKSAWDTII WFGALIMMAA 351 FLNKLGLIKW FSGVLAESVG GLGVSGTAAG
VILVLAYMYA HYMFASTTAH 401 ITAMFGAFFA AAVSLNAPAM PTALMMAAAS
NIMMTLTHYA TGTSPVIFGS 451 GYTTMGEWWK AGFIMSVVNF LIFFVIGSIW
WKVLGYW*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 929
shows 98.8% identity over a 487 aa overlap with a predicted ORF
(ORF 929.ng) from N. gonorrhoeae:
TABLE-US-03344 g929/m929 10 20 30 40 50 60 g929.pep
MKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGVIAAIIGKVMPLGALSII
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| m929
MKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGVIAAIIGKAMPLGALSII 10 20
30 40 50 60 70 80 90 100 110 120 g929.pep
AVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMISRGLLKTGLGMRIGYLFIAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m929
AVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMISRGLLKTGLGMRIGYLFIAV 70 80
90 100 110 120 130 140 150 160 170 180 g929.pep
FGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQSIAGSYGSNPAKGTEGKMGKY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m929
FGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQSIAGSYGSNPAKGTEGKMGKY 130
140 150 160 170 180 190 200 210 220 230 240 g929.pep
LALVNYHSNPISSAMAITATAPNPLIVNLIAENLGSSFRLSWGAWAWAMAVPGVIAFFVM
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| m929
LALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSSFRLSWGAWAWAMAVPGVIAFFVM 190
200 210 220 230 240 250 260 270 280 290 300 g929.pep
PLILYFLYPPEIKETPNAVQFAKDRLSEMGKMSADEIIMAVIFGILLLLWADVPALITGN |||||
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| m929
PLILYXLYPPEIKETPNAVQFAKDRLREMGKMSADEIIMAVIFGILLLLWADVPALITGN 250
260 270 280 290 300 310 320 330 340 350 360 g929.pep
HAFSINATATAFIGLSLLLLSGVLTWDDVLKEKSAWDTIIWFGALIMMAAFLNKLGLIKW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m929
HAFSINATATAFIGLSLLLLSGVLTWDDVLKEKSAWDTIIWFGALIMMAAFLNKLGLIKW 310
320 330 340 350 360 370 380 390 400 410 420 g929.pep
FSGVLAESVGGLGVSGTAAGVILVLAYMYAHYMFASTTAHITAMFGAFLAAAVSLNAPAM
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| m929
FSGVLAESVGGLGVSGTAAGVILVLAYMYAHYMFASTTAHITAMFGAFFAAAVSLNAPAM 370
380 390 400 410 420 430 440 450 460 470 480 g929.pep
PTALMMAAASNIMMTLTHYATGTSPVIFGSGYTTMGEWWKAGFIMSVVNFLIFSVIGSIW
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| m929
PTALMMAAASNIMMTLTHYATGTSPVIFGSGYTTMGEWWKAGFIMSVVNFLIFFVIGSIW 430
440 450 460 470 480 g929.pep WKVLGYWX |||||||| m929 WKVLGYWX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2849>:
TABLE-US-03345 a929.seq 1 ATGAAATTGG GTTTCAAACC GATACCCCTC
GCCATTGCCG CAGTATTGTG 51 CGCCTTGGTT TTGGCACTGC CCGTACCCGA
CGGGGTCAAG CCTCAGGCTT 101 GGACGCTGCT GGCCATGTTT ATCGGTGTGA
TTGCCGCCAT TATCGGCAAG 151 GCCATGCCGT TGGGTGCGCT GTCGATTATT
GCCGTCGGGT TGGTCGCAGT 201 AACCGGCGTA ACCGCCGACA AACCGGGTGC
GGCGATGAGC GATGCGTTGA 251 GTGCGTTCGC CAATCCGTTG ATTTGGCTGA
TTGCCATCGC AGTTATGATT 301 TCGCGCGGTT TGCTCAAAAC AGGGCTGGGG
ATGCGTATCG GATATTTGTT 351 TATCGCCGTT TTTGGAAGAA AAACGCTGGG
CATCGGTTAC AGTCTCGCTC 401 TTTCCGAACT GCTGCTGGCT CCCGTTACCC
CTTCCAATAC CGCGCGCGGC 451 GGCGGCATTA TACATCCGAT TATGCAGTCG
ATTGCCGGCA GTTACGGCTC 501 CAATCCCGCA AAAGGCACAG AAGGCAAGAT
GGGTAAATAT TTGGCTTTGG 551 TCAACTATCA TTCCAATCCC ATTTCGTCGG
CTATGTTTAT TACTGCAACT 601 GCCCCCAACC CTTTAATCGT CAACTTGATT
GCCGAAAATT TAGGCAGTAG 651 TTTCCGTCTT TCTTGGGGGG CGTGGGCGTG
GGCAATGGCT GTTCCCGGCG 701 TTATCGCCTT TTTCGTTATG CCTTTGATTT
TATATTTTTT GTATCCGCCT 751 GAAATTAAAG AAACGCCCAA TGCCGTTCAA
TTTGCCAAAG ACCGTCTGAG 801 GGAGATGGGT AAAATGTCGG CAGACGAAAT
CATTATGGCG GTCATTTTCG 851 GTATCTTGTT GCTGTTGTGG GCAGATGTTC
CCGCCCTTAT TACCGGCAAT 901 CACGCTTTTA GTATCAACGC CACCGCCACC
GCATTTATCG GATTAAGCCT 951 GCTTTTGCTT TCCGGTGTAT TGACTTGGGA
CGATGTTTTG AAAGAAAAAA 1001 GCGCGTGGGA TACGATTATT TGGTTTGGCG
CATTGATTAT GATGGCCGCA 1051 TTTTTAAATA AACTCGGACT GATTAAATGG
TTCTCCGGAG TGTTGGCGGA 1101 AAGTGTCGGC GGTTTGGGCG TTAGCGGCAC
GGCTGCGGGC GTAATCCTCG 1151 TGCTTGCTTA TATGTATGCG CATTATATGT
TTGCCAGTAC TACTGCACAT 1201 ATTACCGCTA TGTTCGGCGC ATTTTTCGCT
GCTGCCGTTT CACTGAATGC 1251 CCCGGCGATG CCGACCGCGC TGATGATGGC
GGCCGCATCT AACATTATGA 1301 TGACCCTCAC TCATTATGCG ACCGGTACTT
CGCCTGTGAT TTTCGGTTCG 1351 GGCTACACCA CAATGGGAGA ATGGTGGAAG
GCGGGTTTTA TCATGAGCGT 1401 AGTCAATTTT CTGATTTTTT TCGTTATCGG
CAGCATTTGG TGGAAAGTTC 1451 TGGGGTATTG GTAA
This corresponds to the amino acid sequence <SEQ ID 2850; ORF
929.a>:
TABLE-US-03346 a929.pep 1 MKLGFKPIPL AIAAVLCALV LALPVPDGVK
PQAWTLLAMF IGVIAAIIGK 51 AMPLGALSII AVGLVAVTGV TADKPGAAMS
DALSAFANPL IWLIAIAVMI 101 SRGLLKTGLG MRIGYLFIAV FGRKTLGIGY
SLALSELLLA PVTPSNTARG 151 GGIIHPIMQS IAGSYGSNPA KGTEGKMGKY
LALVNYHSNP ISSAMFITAT 201 APNPLIVNLI AENLGSSFRL SWGAWAWAMA
VPGVIAFFVM PLILYFLYPP 251 EIKETPNAVQ FAKDRLREMG KMSADEIIMA
VIFGILLLLW ADVPALITGN 301 HAFSINATAT AFIGLSLLLL SGVLTWDDVL
KEKSAWDTII WFGALIMMAA 351 FLNKLGLIKW FSGVLAESVG GLGVSGTAAG
VILVLAYMYA HYMFASTTAH 401 ITAMFGAFFA AAVSLNAPAM PTALMMAAAS
NIMMTLTHYA TGTSPVIFGS 451 GYTTMGEWWK AGFIMSVVNF LIFFVIGSIW WKVLGYW*
m929/a929 99.6% identity in 487 aa overlap 10 20 30 40 50 60
m929.pep
MKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGVIAAIIGKAMPLGALSII
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||| a929
MKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGVIAAIIGKAMPLGALSII 10 20
30 40 50 60 70 80 90 100 110 120 m929.pep
AVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMISRGLLKTGLGMRIGYLFIAV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
AVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMISRGLLKTGLGMRIGYLFIAV 70 80
90 100 110 120 130 140 150 160 170 180 m929.pep
FGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQSIAGSYGSNPAKGTEGKMGKY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
FGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQSIAGSYGSNPAKGTEGKMGKY 130
140 150 160 170 180 190 200 210 220 230 240 m929.pep
LALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSSFRLSWGAWAWAMAVPGVIAFFVM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
LALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSSFRLSWGAWAWAMAVPGVIAFFVM 190
200 210 220 230 240 250 260 270 280 290 300 m929.pep
PLILYXLYPPEIKETPNAVQFAKDRLREMGKMSADEIIMAVIFGILLLLWADVPALITGN |||||
|||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
PLILYFLYPPEIKETPNAVQFAKDRLREMGKMSADEIIMAVIFGILLLLWADVPALITGN 250
260 270 280 290 300 310 320 330 340 350 360 m929.pep
HAFSINATATAFIGLSLLLLSGVLTWDDVLKEKSAWDTIIWFGALIMMAAFLNKLGLIKW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
HAFSINATATAFIGLSLLLLSGVLTWDDVLKEKSAWDTIIWFGALIMMAAFLNKLGLIKW 310
320 330 340 350 360 370 380 390 400 410 420 m929.pep
FSGVLAESVGGLGVSGTAAGVILVLAYMYAHYMFASTTAHITAMFGAFFAAAVSLNAPAM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
FSGVLAESVGGLGVSGTAAGVILVLAYMYAHYMFASTTAHITAMFGAFFAAAVSLNAPAM 370
380 390 400 410 420 430 440 450 460 470 480 m929.pep
PTALMMAAASNIMMTLTHYATGTSPVIFGSGYTTMGEWWKAGFIMSVVNFLIFFVIGSIW
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a929
PTALMMAAASNIMMTLTHYATGTSPVIFGSGYTTMGEWWKAGFIMSVVNFLIFFVIGSIW 430
440 450 460 470 480 m929.pep WKVLGYWX |||||||| a929 WKVLGYWX
[0435] g930.seq not found yet
[0436] g930.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2851>:
TABLE-US-03347 m930.seq 1 ATGAAACTTC CTTTATCCTA TTTGCCTAAT
ATTCGCTTTT TGTCTTGGTG 51 CTGCTTATTG GCAGGTATCA TTGCTCCTGC
TACTTTGTTG GCCTCCCCCA 101 ACCCTGCCGA AATCCGTATG CAGCAAGATA
TTCAGCAACG CCAACGCGAA 151 GAGCAGTTGC GCCAAACCAT GCAGCCTGAA
AGCGATGTGC GTTTGCATCA 201 AAAAAACACG GGGGAAACGG TTAATCAGTT
GATGGGCGAT GACAGCAGCC 251 AACCGTGTTT TGCCATTAAC GAAtGGGTGT
TGGAAGGCGA ACACCATGCT 301 CGGTTTCAGT TTGCCCTAAA ACGTGCCTTG
CGCGAAACGG GTTTTCAGGC 351 TGGCAAGTGT CTGCATGCGG GCAACATTAA
TCAAATCATG TCCTTAGCAC 401 AAAATGCTTT GATCGGCAGG GGATATACCA
CGACCCGTAT CTTGGCTGCG 451 CCACAGGATT TGAATAgTGG aAGCTTCAAT TAA
This corresponds to the amino acid sequence <SEQ ID 2852; ORF
930>:
TABLE-US-03348 m930.pep 1 MKLPLSYLPN IRFLSWCCLL AGIIAPATLL
ASPNPAEIRM QQDIQQRQRE 51 EQLRQTMQPE SDVRLHQKNT GETVNQLMGD
DSSQPCFAIN EWVLEGEHHA 101 RFQFALKRAL RETGFQAGKC LHAGNINQIM
SLAQNALIGR GYTTTRILAA 151 PQDLNSGSFN *
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2853>:
TABLE-US-03349 g930-1.seq (partial) 1 GGCAAGTGTC TGCATGCGGG
CGACATTAAT CAAATCATGT CCTTAGCACA 51 AAATGCTTTG ATCGGCAGGG
GATATACCAC GACCCGTATC TTGGCTGCGC 101 CACAGGATTT GAATAGTGGC
AAGCTTCAAT TAACCCTGAT GCCGGGCTAT 151 CTGCGCTCCA TACGAATCGA
TCGGTCCAAC GATGATCAAA CCCATGCAGG 201 ACGTATTGCA GCATTCCAAA
ACAAATTTCC CACCCGCTCG AACGATCTGT 251 TGAATCTGCG TGATTTGGAA
CAAGGACTGG AAAATCTCAA ATGTCTCCCG 301 ACTGCGGAAG CCGATCTCCA
AATCGTTCCC GTAGAGAGAG AACCAAACCA 351 AAGTGATGTC GTGGTGCAAT
GGCGGTAACG TCTGCTGCCC TACTGTGTGA 401 GTGTGGGGAT GGATAATTCG
GGTAGTGAGG CGACAGGAAA ATACCAAGGA 451 AATATCACTT TCTCTGCCGA
CAATCCTTTT GGACTGAGTG ATATGTTCTA 501 TGTAAATTAT GGACGTTCAA
TTGGCGGTAC GCCCGATGAG GAAAATTTTG 551 ACGGCCATCG CAAAGAAGGC
GGATCAAACA ATTACGCCGT ACATTATTCA 601 GCCCCTTTCG GTAAATGGAC
ATGGGCATTC AATCACAATG GCTACCGTTA 651 CCATCAGGCG GTTTCCGGAT
TATCGGAAGT CTATGACTAT AATGGAAAAA 701 GTTACAACAC TGATTTCGGC
TTCAACCGCC TGTTGTATCG TGATGCCAAA 751 CGCAAAACCT ATCTCAGTGT
AAAACTGTGG ACGAGGGAAA CAAAAAGTTA 801 CATTGATGAT GCCGAACTGA
CTGTACAACG GCGTAAAACC ACAGGTTGGT 851 TGGCAGAACT TTCCCACAAA
GGATATATCG GTCGCAGTAC GGCAGATTTT 901 AAGTTGAAAT ATAAACACGG
CACCGGCATG AAAGATGCTC TGCGCGCGCC 951 TGAAGAAGCC TTTGGCGAAG
GCACGTCACG TATGAAAATT TGGACGGCAT 1001 CGGCTGATGT AAATACTCCT
TTTCAAATCG GTAAACAGCT ATTTGCCTAT 1051 GACACATCCG TTCATGCACA
ATGGAACAAA ACCCCGCTAA CATCGCAAGA 1101 CAAACTGGCT ATCGGCGGAC
ACCACACCGT ACGTGGCTTC GACGGTGAAA 1151 TGAGTTTGCC TGCCGAGCGG
GGATGGTATT GGCGCAACGA TTTGAGCTGG 1201 CAATTTAAAC CAGGCCATCA
GCTTTATCTT GGGGCTGATG TAGGACATGT 1251 TTCAGGACAA TCCGCCAAAT
GGTTATCGGG CCAAACTCTA GCCGGCACAG 1301 CAATTGGGAT ACGCGGGCAG
ATAAAGCTTG GCGGCAACCT GCATTACGAT 1351 ATATTTACCG GCCGTGCATT
GAAAAAGCCC GAATATTTTC AGACGAAGAA 1401 ATGGGTAACG GGGTTTCAGG
TGGGTTATTC GTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2854; ORF
930-1.ng>:
TABLE-US-03350 g930-1.pep (partial) 1 GKCLHAGDIN QIMSLAQNAL
IGRGYTTTRI LAAPQDLNSG KLQLTLMPGY 51 LRSIRIDRSN DDQTHAGRIA
AFQNKFPTRS NDLLNLRDLE QGLENLKCLP 101 TAEADLQIVP VEREPNQSDV
VVQWR*RLLP YCVSVGMDNS GSEATGKYQG 151 NITFSADNPF GLSDMFYVNY
GRSIGGTPDE ENFDGHRKEG GSNNYAVHYS 201 APFGKWTWAF NHNGYRYHQA
VSGLSEVYDY NGKSYNTDFG FNRLLYRDAK 251 RKTYLSVKLW TRETKSYIDD
AELTVQRRKT TGWLAELSHK GYIGRSTADF 301 KLKYKHGTGM KDALRAPEEA
FGEGTSRMKI WTASADVNTP FQIGKQLFAY 351 DTSVHAQWNK TPLTSQDKLA
IGGHHTVRGF DGEMSLPAER GWYWRNDLSW 401 QFKPGHQLYL GADVGHVSGQ
SAKWLSGQTL AGTAIGIRGQ IKLGGNLHYD 451 IFTGRALKKP EYFQTKKWVT
GFQVGYSF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2855>:
TABLE-US-03351 m930-1.seq 1 ATGAAACTTC CTTTATCCTA TTTGCCTAAT
ATTCGCTTTT TGTCTTGGTG 51 CTGCTTATTG GCAGGTATCA TTGCTCCTGC
TACTTTGTTG GCCTCCCCCA 101 ACCCTGCCGA AATCCGTATG CAGCAAGATA
TTCAGCAACG CCAACGCGAA 151 GAGCAGTTGC GCCAAACCAT GCAGCCTGAA
AGCGATGTGC GTTTGCATCA 201 AAAAAACACG GGGGAAACGG TTAATCAGTT
GATGGGCGAT GACAGCAGCC 251 AACCGTGTTT TGCCATTAAC GAAGTGGTGT
TGGAAGGCGA ACACCATGCT 301 CGGTTTCAGT TTGCCCTAAA ACGTGCCTTG
CGCGAAACGG GTTTTCAGGC 351 TGGCAAGTGT CTGCATGCGG GCAACATTAA
TCAAATCATG TCCTTAGCAC 401 AAAATGCTTT GATCGGCAGG GGATATACCA
CGACCCGTAT CTTGGCTGCG 451 CCACAGGATT TGAATAGTGG CAAGCTTCAA
TTAACCCTGA TACCGAGCTA 501 TCTGCGCTCC ATACGAATCG ATCGGTCTAA
CGATGATCAA ACCCATGCAG 551 GACGTATTGC AGCATTCCAG AACAAATTTC
CCACCCGCTC GAACGATCTG 601 TTGAATCTGC GTGATTTGGA ACAAGGACTG
GAAAATCTCA AACGTCTCCC 651 GACTGCGGAA GCCGATCTCC AAATCGTTCC
CGTAGAGGGA GAACCAAACC 701 AAAGTGATGT CGTGGTGCAA TGGCGGCAAC
GTCTGCTGCC CTACCGTGTG 751 AGTGTGGGGA TGGATAATTC GGGTAGTGAG
GCGACAGGAA AATACCAAGG 801 AAATATCACT TTCTCTGCCG ACAATCCTTT
GGGACTGAGT GATATGTTCT 851 ATGTAAATTA TGGACGTTCG ATTGGCGGTA
CGCCCGATGA GGAAAGTTTT 901 GACGGCCATC GCAAAGAAGG CGGATCAAAC
AATTACGCCG TACATTATTC 951 AGCCCCTTTC GGTAAATGGA CATGGGCATT
CAATCACAAT GGCTACCGTT 1001 ACCATCAGGC AGTTTCCGGA TTATCGGAAG
TCTATGACTA TAATGGAAAA 1051 AGTTACAATA CTGATTTCGG CTTCAACCGC
CTGTTGTATC GTGATGCCAA 1101 ACGCAAAACC TATCTCGGTG TAAAACTGTG
GATGAGGGAA ACAAAAAGTT 1151 ACATTGATGA TGCCGAACTG ACTGTACAAC
GGCGTAAAAC TGCGGGTTGG 1201 TTGGCAGAAC TTTCCCACAA AGAATATATC
GGTCGCAGTA CGGCAGATTT 1251 TAAGTTGAAA TATAAACGCG GCACCGGCAT
GAAAGATGCT CTGCGCGCGC 1301 CTGAAGAAGC CTTTGGCGAA GGCACGTCAC
GTATGAAAAT TTGGACGGCA 1351 TCGGCTGATG TAAATACTCC TTTTCAAATC
GGTAAACAGC TATTTGCCTA 1401 TGACACATCC GTTCATGCAC AATGGAACAA
AACCCCGCTA ACATCGCAAG 1451 ACAAACTGGC TATCGGCGGA CACCACACCG
TACGTGGCTT CGACGGTGAA 1501 ATGAGTTTGT CTGCCGAGCG GGGATGGTAT
TGGCGCAACG ATTTGAGCTG 1551 GCAATTTAAA CCAGGCCATC AGCTTTATCT
TGGGGCTGAT GTAGGACATG 1601 TTTCAGGACA ATCCGCCAAA TGGTTATCGG
GCCAAACTCT AGTCGGCACA 1651 GCAATTGGGA TACGCGGGCA GATAAAGCTT
GGCGGCAACC TGCATTACGA 1701 TATATTTACC GGCCGCGCAT TGAAAAAGCC
CGAATTTTTC CAATCAAGGA 1751 AATGGGCAAG CGGTTTTCAG GTAGGCTATA
CGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2856; ORF
930-1>:
TABLE-US-03352 m930-1.pep 1 MKLPLSYLPN IRFLSWCCLL AGIIAPATLL
ASPNPAEIRM QQDIQQRQRE 51 EQLRQTMQPE SDVRLHQKNT GETVNQLMGD
DSSQPCFAIN EVVLEGEHHA 101 RFQFALKRAL RETGFQAGKC LHAGNINQIM
SLAQNALIGR GYTTTRILAA 151 PQDLNSGKLQ LTLIPSYLRS IRIDRSNDDQ
THAGRIAAFQ NKFPTRSNDL 201 LNLRDLEQGL ENLKRLPTAE ADLQIVPVEG
EPNQSDVVVQ WRQRLLPYRV 251 SVGMDNSGSE ATGKYQGNIT FSADNPLGLS
DMFYVNYGRS IGGTPDEESF 301 DGHRKEGGSN NYAVHYSAPF GKWTWAFNHN
GYRYHQAVSG LSEVYDYNGK 351 SYNTDFGFNR LLYRDAKRKT YLGVKLWMRE
TKSYIDDAEL TVQRRKTAGW 401 LAELSHKEYI GRSTADFKLK YKRGTGMKDA
LRAPEEAFGE GTSRMKIWTA 451 SADVNTPFQI GKQLFAYDTS VHAQWNKTPL
TSQDKLAIGG HHTVRGFDGE 501 MSLSAERGWY WRNDLSWQFK PGHQLYLGAD
VGHVSGQSAK WLSGQTLVGT 551 AIGIRGQIKL GGNLHYDIFT GRALKKPEFF
QSRKWASGFQ VGYTF* m930-1/g930-1 95.4% identity in 478 aa overlap 90
100 110 120 130 140 m930-1.pep
AINEVVLEGEHHARFQFALKRALRETGFQAGKCLHAGNINQIMSLAQNALIGRGYTTTRI
|||||||:|||||||||||||||||||||| g930-1.pep
GKCLHAGDINQIMSLAQNALIGRGYTTTRI 10 20 30 150 160 170 180 190 200
m930-1.pep
LAAPQDLNSGKLQLTLIPSYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLE
||||||||||||||||:|:|||||||||||||||||||||||||||||||||||||||||
g930-1.pep
LAAPQDLNSGKLQLTLMPGYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLE 40 50
60 70 80 90 210 220 230 240 250 260 m930-1.pep
QGLENLKRLPTAEADLQIVPVEGEPNQSDVVVQWRQRLLPYRVSVGMDNSGSEATGKYQG
||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||||||||
g930-1.pep
QGLENLKCLPTAEADLQIVPVEREPNQSDVVVQWRXRLLPYCVSVGMDNSGSEATGKYQG 100
110 120 130 140 150 270 280 290 300 310 320 m930-1.pep
NITFSADNPLGLSDMFYVNYGRSIGGTPDEESFDGHRKEGGSNNYAVHYSAPFGKWTWAF
|||||||||:|||||||||||||||||||||:||||||||||||||||||||||||||||
g930-1.pep
NITFSADNPFGLSDMFYVNYGRSIGGTPDEENFDGHRKEGGSNNYAVHYSAPFGKWTWAF 160
170 180 190 200 210 330 340 350 360 370 380 m930-1.pep
NHNGYRYHQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLGVKLWMRETKSYIDD
|||||||||||||||||||||||||||||||||||||||||||||:|||| |||||||||
g930-1.pep
NHNGYRYHQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLSVKLWTRETKSYIDD 220
230 240 250 260 270 390 400 410 420 430 440 m930-1.pep
AELTVQRRKTAGWLAELSHKEYIGRSTADFKLKYKRGTGMKDALRAPEEAFGEGTSRMKI
||||||||||:||||||||| ||||||||||||||:||||||||||||||||||||||||
g930-1.pep
AELTVQRRKTTGWLAELSHKGYIGRSTADFKLKYKHGTGMKDALRAPEEAFGEGTSRMKI 280
290 300 310 320 330 450 460 470 480 490 500 m930-1.pep
WTASADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLSAER
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
g930-1.pep
WTASADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLPAER 340
350 360 370 380 390 510 520 530 540 550 560 m930-1.pep
GWYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLSGQTLVGTAIGIRGQIKLGGNLHYD
||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||
g930-1.pep
GWYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLSGQTLAGTAIGIRGQIKLGGNLHYD 400
410 420 430 440 450 570 580 590 m930-1.pep
IFTGRALKKPEFFQSRKWASGFQVGYTF |||||||||||:||::||::||||||:|
g930-1.pep IFTGRALKKPEYFQTKKWVTGFQVGYSFX 460 470
[0437] a930-1.seq not yet found
[0438] a930-1.pep not yet found
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2857>:
TABLE-US-03353 g931.seq 1 ATGAAACCCA AATTCAAAAC CGTTTTAACC
GCGCTGCTTT TGGCGGTTTC 51 CCTGCCGTCT ATGGCGGCAA CCCGCGTCCT
GATGGAAACC GATATGGGCA 101 ATATCCGTTT GGTTTTGGAC GAATCCAAAG
CCTCCAAAAC CGTTGCCAAT 151 TTCGTGCGCT ATGCCCGAAA AGGCTTTTAC
GACAACACGA TTTTCCACCG 201 CGTcatCGGC GGCTTCGTCA TCCAAGGCGA
CGGATTGACC GAGGACTTGG 251 TGCAAAAGGC AACCGATAAG GCCGTTGCCA
ACGAATCCGG caacgGCTTG 301 AAAAACACCG TCGGCACCAT CGCAATGGCG
CGGACGGCAG CCCCCGATTC 351 CGCCGCCGCC CAATTCTTTA TCAATCTGGC
GGACAACGGT TCGCTCGACT 401 ACAAAAACGG ACAATACGGC TACACCGTTT
TCGGCAGGGT AGAAAGCGGA 451 ATGGACACCG TTTCCAAAAT CGCCCGCGTC
AAAACCGCCA CGCGCGGCTT 501 TTATCAAAAC GTACCCGTAC AGCCCGTCAA
AATCCGTCGC GTTGTTGTCG 551 GGCAGTAACA CGCAGACAGA CGTTCAGACG
GCGTCGCCCG TTTCCCAAAA 601 AACGCCGTTT AA
This corresponds to the amino acid sequence <SEQ ID 2858; ORF
931.ng>:
TABLE-US-03354 g931.pep 1 MKPKFKTVLT ALLLAVSLPS MAATRVLMET
DMGNIRLVLD ESKASKTVAN 51 FVRYARKGFY DNTIFHRVIG GFVIQGDGLT
EDLVQKATDK AVANESGNGL 101 KNTVGTIAMA RTAAPDSAAA QFFINLADNG
SLDYKNGQYG YTVFGRVESG 151 MDTVSKIARV KTATRGFYQN VPVQPVKIRR
VVVGQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2859>:
TABLE-US-03355 m931.seq 1 ATGAAACCCA AATTCAAAAC CGTTTTAACC
GCGCTGCTTT TGGCGGTTTC 51 CCTGCCGTCT ATGGCGGCAA CCCATGTTTT
GATGGAAACC GATATGGGCA 101 ATATCCGTTT GGTTTTGGAC GAATCCAAAG
CCCCCAAAAC CGTTGCTAAT 151 TTCGTGCGCT ATGCCCGAAA AGGCTTTTAC
GACGACACCG TTTTTCACCG 201 CGTTATCGAC GGTTTTGTTA TCCAGGGCGG
TGGATTGACC GAGGACTTGG 251 CACAAAAGGC AAGCGATAAG GCCGTTGCCA
ACGAATCCGG CAACGGCTTG 301 AAAAACACCG CCGGCACCAT CGCCATGGCG
CGGACGACAG CCCCCGATTC 351 CGCCACCAGC CAATTCTTTA TCAATCTGGC
GGACcA.kCT TCGCTCGACT 401 ACAAAAACGG ACAATACGGC TATACCGTTT
TCGGCAGGGT CGAAAGCGGC 451 ATGAACACCG TTTCCAAAAT CGCCCGCGTC
AAAACCGCCA CGCGCGGCTT 501 TTATCAAAAC GTACCCGTAC AGCCCGTCAA
AATCCGTCGC GTTGTTGTCG 551 GGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 2860; ORF
931>:
TABLE-US-03356 m931.pep.. 1 MKPKFKTVLT ALLLAVSLPS MAATHVLMET
DMGNIRLVLD ESKAPKTVAN 51 FVRYARKGFY DDTVFHRVID GFVIQGGGLT
EDLAQKASDK AVANESGNGL 101 KNTAGTIAMA RTTAPDSATS QFFINLADXX
SLDYKNGQYG YTVFGRVESG 151 MNTVSKIARV KTATRGFYQN VPVQPVKIRR
VVVGQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 931
shows 91.9% identity over a 185 aa overlap with a predicted ORF
(ORF 931.ng) from N. gonorrhoeae:
TABLE-US-03357 g931/m931 10 20 30 40 50 60 g931.pep
MKPKFKTVLTALLLAVSLPSMAATRVLMETDMGNIRLVLDESKASKTVANFVRYARKGFY
||||||||||||||||||||||||:||||||||||||||||||| ||||||||||||||| m931
MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKAPKTVANFVRYARKGFY 10 20
30 40 50 60 70 80 90 100 110 120 g931.pep
DNTIFHRVIGGFVIQGDGLTEDLVQKATDKAVANESGNGLKNTVGTIAMARTAAPDSAAA
|:|:||||| |||||| ||||||:|||:|||||||||||||||:||||||||:|||||:: m931
DDTVFHRVIDGFVIQGGGLTEDLAQKASDKAVANESGNGLKNTAGTIAMARTTAPDSATS 70 80
90 100 110 120 130 140 150 160 170 180 g931.pep
QFFINLADNGSLDYKNGQYGYTVFGRVESGMDTVSKIARVKTATRGFYQNVPVQPVKIRR
|||||||| |||||||||||||||||||||:|||||||||||||||||||||||||||| m931
QFFINLADXXSLDYKNGQYGYTVFGRVESGMNTVSKIARVKTATRGFYQNVPVQPVKIRR 130
140 150 160 170 180 g931.pep VVVGQX |||||| m931 VVVGQX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2861>:
TABLE-US-03358 a931.seq 1 ATGAAACCCA AATTCAAAAC CGTTTTAACC
GCGCTGCTTT TGGCGGTTTC 51 CCTGCCGTCT ATGGCGGCAA CCCATGTTTT
GATGGAAACC GATATGGGCA 101 ATATCCGTTT GGTTTTGGAC GAATCCAAAG
CACCCAAAAC CGTTGCCAAT 151 TTCGTGCGCT ATGCCCGAAA AGGCTTTTAC
GACAATACGA TTTTTCACCG 201 CGTCATCGGC GGCTTCGTTA TCCAAGGCGG
CGGATTGACC GAGGACTTGG 251 CACAAAAGGC AAGCGATAAG GCCGTTGCCA
ACGAATCCGG CAACGGCTTG 301 AAAAACACTG TCGGCACCAT CGCCATGGCG
CGGACGGCCG ATCCGGATTC 351 CGCCACCAGC CAATTCTTTA TCAATCTGGT
GGACAATGAT TCGCTCAACT 401 ACAAAAACGG ACAATACGGC TATACCGTTT
TCGGCAGGGT CGAAAGCGGC 451 ATGAACACCG TTTCCAAAAT CGCCCGCGTC
AAAACCGCCA CGCGCGGCTT 501 TTATCAAAAC GTACCCGTAC AGCCCGTCAA
AATCCGTCGC GTTGTTGTCG 551 GGCAGTAA
This corresponds to the amino acid sequence <SEQ ID 2862; ORF
931.a>:
TABLE-US-03359 a931.pep 1 MKPKFKTVLT ALLLAVSLPS MAATHVLMET
DMGNIRLVLD ESKAPKTVAN 51 FVRYARKGFY DNTIFHRVIG GFVIQGGGLT
EDLAQKASDK AVANESGNGL 101 KNTVGTIAMA RTADPDSATS QFFINLVDND
SLNYKNGQYG YTVFGRVESG 151 MNTVSKIARV KTATRGFYQN VPVQPVKIRR VVVGQ*
m931/a931 94.6% identity in 185 aa overlap 10 20 30 40 50 60
m931.pep
MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKAPKTVANFVRYARKGFY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a931
MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKAPKTVANFVRYARKGFY 10 20
30 40 50 60 70 80 90 100 110 120 m931.pep
DDTVFHRVIDGFVIQGGGLTEDLAQKASDKAVANESGNGLKNTAGTIAMARTTAPDSATS
|:|:||||| |||||||||||||||||||||||||||||||||:||||||||: |||||| a931
DNTIFHRVIGGFVIQGGGLTEDLAQKASDKAVANESGNGLKNTVGTIAMATADPDSATS 70 80
90 100 110 120 130 140 150 160 170 180 m931.pep
QFFINLADXXSLDYKNGQYGYTVFGRVESGMNTVSKIARVKTATRGFYQNVPVQPVKIRR
||||||:| ||:||||||||||||||||||||||||||||||||||||||||||||||| a931
QFFINLVDNDSLNYKNGQYGYTVFGRVESGMNTVSKIARVKTATRGFYQNVPVQPVKIRR 130
140 150 160 170 180 m931.pep VVVGQX |||||| a931 VVVGQX
[0439] g932. seq not found yet
[0440] g932. pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2863>:
TABLE-US-03360 m932.seq 1 ATGAAATATA TCGTATCAAT CTCTCTGGCT
ATGGGATTGG CTGCCTGTTC 51 GTTTGGGGGA TTTAAACCAA ATCCGTGGGA
CGCCGCGTCA TTTTGGGAAT 101 TGAAAAATTA CGCCAATCCC TATCCGGGAT
CAGCCTCGGC GGCACTTGAC 151 CAATATCCAT CGAAAGCAAG ACGAAGGCAA
CTGAAAGACA TGCAAGAGTG 201 CGGCTATGAC CCAATAGACG GCGGAAAGTC
TGAAGCAGAT GCCTGCCTGA 251 GGAAAAAAGG CTGGTGTCGT AAGGGTTTCG
ACCCTTATCC CGAAAACAAA 301 AAATACGAAT GGCCTCGAGA AGAAGGAAAA
ACAAAATGA
This corresponds to the amino acid sequence <SEQ ID 2864; ORF
932>:
TABLE-US-03361 m932.pep 1 MKYIVSISLA MGLAACSFGG FKPNPWDAAS
FWELKNYANP YPGSASAALD 51 QYPSKARRRQ LKDMQECGYD PIDGGKSEAD
ACLRKKGWCR KGFDPYPENK 101 KYEWPREEGK TK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 932
shows ______ % identity over a ______ aa overlap with a predicted
ORF (ORF 932.ng) from N. gonorrhoeae: The following partial DNA
sequence was identified in N.gonorrhoeae <SEQ ID 2865>:
TABLE-US-03362 g934.seq 1 ATGAAAAAAA TCATCGCCTC CGCGCTTATC
GCAACATTCG CACTCACCGC 51 CTGCCAAGAC GACACGCAGG CGCGGCTCGA
ACGGCAGCAG AAACAGATTG 101 AAGCCCTGCA ACAGCAGCTC GCACAGCAGG
CAGACGATAC GGTTTACCAA 151 CTGACTCCCG AAGCAGTCAA AGACACCATT
CCTGCCCAGG CGCAGGCAAA 201 CGGCAACAAC GGTCAGCCCG TTACCGGCAA
.AGAcggGCA GCAGTATATT 251 TACGACCAAT CGACAGGAAG CTGGCTGCTG
CAAAGCCTGA TTGGCGCGGC 301 GGCAGGCGCG TTTATCGGCA ACGCGCTGGC
AAACAAATTC ACACGGGCGG 351 GCAACCAAGA CAGCCCCGTC GCCCGTCGCG
CGCGTGCTGC CTACCATCAG 401 TCCGCACGCC CCAATGCGCG CACCAGCAGG
GATTTGAACA CGCGCAGCCT 451 CCGTGCAAAA CAACAGGCGG CGCAGGCGCA
GCGTTACCGC CCGACAACGC 501 GCCCGCCCGT CAAttaccgc catcgcgcta
tgcGCGGTTT CGgcagAagg 551 cggtaaaCCC GGCGCGTCAA TGCCGTCTGA
AGGGCTTTCA GACGGCATTT 601 TTGTATTTGT TAGGGGCATT GTTATGTTGC
CGTTTGATTT TCAGACGGCA 651 TTTTGTTTCC AAGCGTTTGA TGTcggGATG
GCAATTCTGA
This corresponds to the amino acid sequence <SEQ ID 2866; ORF
934.ng>:
TABLE-US-03363 g934.pep 1 MKKIIASALI ATFALTACQD DTQARLERQQ
KQIEALQQQL AQQADDTVYQ 51 LTPEAVKDTI PAQAQANGNN GQPVTGKRRA
AVYLRPIDRK LAAAKPDWRG 101 GRRVYRQRAG KQIHTGGQPR QPRRPSRACC
LPSVRTPQCA HQQGFEHAQP 151 PCKTTGGAGA ALPPDNAPAR QLPPSRYARF
RQKAVNPARQ CRLKGFQTAF 201 LYLLGALLCC RLIFRRHFVS KRLMSGWQF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2867>:
TABLE-US-03364 m934.seq (partial) 1 ..CGGCTCGAAC AGCAGCAGAA
ACAGATTGAA GCCCTGCAAC AGCAGCTCGC 51 ACAGCAGGCA GACGATACGG
TTTACCAACT GACTCCCGAA GCAGTCAAAG 101 ACACCATTCC TGCCGAAGCA
CAGGCAAACG GCAACAACgG GCAACCCGTT 151 ACCGGTAA.A GACGGGCAGC
AGTATATTTA CGACCAATCG ACAGGAAGCT 201 GGCTGCTGCA AAGCCTGGTC
GGCGCGGCGG CAGGCGCGTT TATCGGCAAC 251 GCGCTGGCAA ACAAATTCAC
ACGGGCAGGC AACCAAGACA GTCCCGTCGC 301 CCGGCGCGCG CGTGCAGCCT
ACCATCAGTC CGCACGCCCC AATGCGCGCA 351 yCAGCAGGGA TTTGAACACG
CGCAGCCTCC GTGCAAAACA ACAGGCGGCG 401 CAkGCGCAGC GTTACCGCCC
GACAACGCGC CCGsCCGsCA ATTACCGCCG 451 CCCCGCTATG CGCGGTTTCG
GCAGGAGGCG GTAAACCCGG CGCGCCAATG 501 CCGTCTGAAG AGCTTTCAGA
CGGCATTTnT GCATTTGTTA GGGACATTGT 551 TATGTTGCCG TTTGATTTTC
AGACGGCATT TTGTTTCCAA GCGTTTGATG 601 TCGGGATGGC AATTCTGA
This corresponds to the amino acid sequence <SEQ ID 2868; ORF
934>:
TABLE-US-03365 m934.pep (partial) 1 ..RLEQQQKQIE ALQQQLAQQA
DDTVYQLTPE AVKDTIPAEA QANGNNGQPV 51 TGXRRAAVYL RPIDRKLAAA
KPGRRGGRRV YRQRAGKQIH TGRQPRQSRR 101 PARACSLPSV RTPQCAHQQG
FEHAQPPCKT TGGAXAALPP DNAPXRQLPP 151 PRYARFRQEA VNPARQCRLK
SFQTAFXHLL GTLLCCRLIF RRHFVSKRLM 201 SGWQF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 934
shows 91.7% identity over a 205 aa overlap with a predicted ORF
(ORF 934.ng) from N. gonorrhoeae:
TABLE-US-03366 m934/g934 10 20 30 m934.pep
RLEQQQKQIEALQQQLAQQADDTVYQLTPEAVKDTI
|||:|||||||||||||||||||||||||||||||| g934
MKKIIASALIATFALTACQDDTQARLERQQKQIEALQQQLAQQADDTVYQLTPEAVKDTI 10 20
30 40 50 60 40 50 60 70 80 90 m934.pep
PAEAQANGNNGQPVTGXRRAAVYLRPIDRKLAAAKPGRRGGRRVYRQRAGKQIHTGRQPR
||:||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| g934
PAQAQANGNNGQPVTGKRRAAVYLRPIDRKLAAAKPDWRGGRRVYRQRAGKQIHTGGQPR 70 80
90 100 110 120 100 110 120 130 140 150 m934.pep
QSRRPARACSLPSVRTPQCAHQQGFEHAQPPCKTTGGAXAALPPDNAPXRQLPPPRYARF |
|||:||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||| g934
QPRRPSRACCLPSVRTPQCAHQQGFEHAQPPCKTTGGAGAALPPDNAPARQLPPSRYARF 130
140 150 160 170 180 160 170 180 190 200 m934.pep
RQEAVNPARQCRLKSFQTAFXHLLGTLLCCRLIFRRHFVSKRLMSGWQFX
||:|||||||||||:||||| :|||:|||||||||||||||||||||||| g934
RQKAVNPARQCRLKGFQTAFLYLLGALLCCRLIFRRHFVSKRLMSGWQFX 190 200 210 220
230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2869>:
TABLE-US-03367 a934.seq 1 ATGAAAAAAA TCATCGCCTC CGCGCTTATC
GCAACATTCG CACTCGCCGC 51 CTGCCAAGAC GACGCGCAGG CGCGGCTCGA
ACAGCAGCAG AAACAGATTG 101 AAGCCCTGCA ACAGCAGCTC GCACAGCAGG
CAGACGATAC GGTTTACCAA 151 CTGACTCCCG AAGCAGTCAA AGACACCATT
CCTGCCGAAG CACAGGCAAA 201 CGGCAACAAC GGGCAACCCG TTACCGG.TA
AAGACGGGCA GCAGTATATT 251 TACGACCAAT CGACAGGAAG CTGGCTGCTG
CAAAGCCTGG TCGGCGCGGC 301 GGCAGGCGCG TTTATCGGCA ACGCGCTGGC
AAACAAATTC ACACGGGCAG 351 GCAACCAAGA CAGTCCCGTC GGCAGGCGCG
CGCGTGCCGC CTACCATCAG 401 TCCGCACATC CCAATGCGCG CACCAGCAGG
GATTTGAACA CGCGCAGCCT 451 CCGTGCAAAA CAACAGGCGG CGCAGGCGCA
GCGTTACCGC CCGACAACGC 501 GCCCGCCCGC CAATTACCGC CGCCCCGCCA
TGCGCGGTTT CGGCAGAAGG 551 CGGTAAATCC GGCGTGCCAA TGCCGTCTGA
AGGGCTTTCA GACGGCATTT 601 TTGTATTTGT TAGGGACATT GTTATGTTGC
CGTTTGATTT TTAGACGGCA 651 TTTTGTTTCC AAGAGTTTGA TGTCGGGATG
GCAATTCTGA
This corresponds to the amino acid sequence <SEQ ID 2870; ORF
934.a>:
TABLE-US-03368 a934.pep 1 MKKIIASALI ATFALAACQD DAQARLEQQQ
KQIEALQQQL AQQADDTVYQ 51 LTPEAVKDTI PAEAQANGNN GQPVTX*RRA
AVYLRPIDRK LAAAKPGRRG 101 GRRVYRQRAG KQIHTGRQPR QSRRPARACR
LPSVRTSQCA HQQGFEHAQP 151 PCKTTGGAGA ALPPDNAPAR QLPPPRHARF
RQKAVNPACQ CRLKGFQTAF 201 LYLLGTLLCC RLIFRRHFVS KSLMSGWQF*
m934/a934 94.1% identity in 205 aa overlap 10 20 30 m934.pep
RLEQQQKQIEALQQQLAQQADDTVYQLTPEAVKDTI
|||||||||||||||||||||||||||||||||||| a934
MKKIIASALIATFALAACQDDAQARLEQQQKQIEALQQQLAQQADDTVYQLTPEAVKDTI 10 20
30 40 50 60 40 50 60 70 80 90 m934.pep
PAEAQANGNNGQPVTGXRRAAVYLRPIDRKLAAAKPGRRGGRRVYRQRAGKQIHTGRQPR
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a934
PAEAQANGNNGQPVTXXRRAAVYLRPIDRKLAAAKPGRRGGRRVYRQRAGKQIHTGRQPR 70 80
90 100 110 120 100 110 120 130 140 150 m934.pep
QSRRPARACSLPSVRTPQCAHQQGFEHAQPPCKTTGGAXAALPPDNAPXRQLPPPRYARF
||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||||:||| a934
QSRRPARACRLPSVRTSQCAHQQGFEHAQPPCKTTGGAGAALPPDNAPARQLPPPRHARF 130
140 150 160 170 180 160 170 180 190 200 m934.pep
RQEAVNPARQCRLKSFQTAFXHLLGTLLCCRLIFRRHFVSKRLMSGWQFX ||:|||||
|||||:||||| :||||||||||||||||||| |||||||| a934
RQKAVNPACQCRLKGFQTAFLYLLGTLLCCRLIFRRHFVSKSLMSGWQFX 190 200 210 220
230
[0441] g935.seq not found yet
[0442] g935.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2871>:
TABLE-US-03369 m935.seq 1 ATGTTGTATT TCAGATACGG CTTTTTGGTT
GTTTGGTGTG CGGCAGGTGT 51 TTCTGCCGCC TATGGGGCGG ATGCGCCCGC
GATTTTGGAT GACAAGGCAT 101 TGTTGCAGGT GCAGCGGTCG GTGTCGGATA
AGTGGGCGGA ATCAGATTGG 151 AAAGTTGAAA ATGATGCCCC GCGCGTGGTT
GACGGGGATT TTTTGTTGGC 201 GCATCCGAAA ATGTTGGAAC ATAGTTTGCG
CGACGCGCTC AACGGCAATC 251 AGGCGGATTT AATCGCTTCG TTGGCGGATT
TGTATGCCAA GCTGCCGGAT 301 TATGACGCGG TTTTGTACGG CAGGGCGCGG
GCTTTGCTGG CGAAATTGGC 351 GGGAAGGCCG GCGGAGGCGG TGGCGCGGTA
TCGGGAACTG CACGGGGAAA 401 ATGCGGCAGA CGAGCGGATT TTGCTGGATT
TGGCGGCGGC GGAGTTTGAC 451 GATTTCCGGC TGAAGTCGGC AGAAAGGCAT
TTTGCGGAGG CGGCAAAATT 501 GGATTTGCCG GCACCGGTTT TGGAAAATGT
GGGGCGTTTT CGGAAAAAAA 551 CGGAGGGGCT GACGGGCTGG CGTTTTTCGG
GCGGCATCAG TCCGGCGGTC 601 AATAGAAATG CCAATAATGC CGCGCCGCAA
TATTGCCGGC AAAACGGAGG 651 CCGGCAGATA TGCAGTGTCA GCCGGGCGGA
GCGGGCGGCA GGGTTGAATT 701 ATGAAATCGA GGCGGAAAAG CTGACGCCGT
TGGCAGATAA TCATTATTTG 751 TTGTTCCGTT CCAATATCGG CGGCACGAGC
TATTATTTCA GTAAAAAATC 801 AGCTTATGAT GACGGGTTCG GCAGGGCGTA
TTTGGGTTGG CAGTATAAAA 851 ATGCACGGCA GACGGCGGGG ATTTTGCCGT
TTTATCAGGT GCAGTTGTCG 901 GGCAGCGACG GCTTTGATGC GAAAACAAAA
CGGGTAAACA ACCGCCGCCT 951 GCCGCCGTAT ATGCTGGCGC ACGGAGTCGG
CGTGCAGCTG TCCCATACTT 1001 ACCGCCCAAA CCCGGGATGG CAATTTTCGG
TCGCGCTGGA ACATTACCGC 1051 CAACGCTACC GCGAACAGGA TAGGGCGGAA
TACAATAACG GCAGGCAGGA 1101 CGGGTTTTAT GTTTCGTCGG CAAAACGTTT
GGGCGAATCG GCAACTGTGT 1151 TCGGCGGCTG GCAGTTTGTG CGGTTTGTGC
CGAAACGCGA AACGGTGGGC 1201 GGCGCGGTCA ATAATGCCGC CTACCGGCGC
AACGGTGTTT ATGCCGGTTG 1251 GGCGCAGGAG TGGCGGCAGT TGGGCGGTTT
GAACAGTCGG GTTTCCGCGT 1301 CTTATGCCCG CCGCAACTAT AAGGGCATTG
CGGCTTTCTC GACAGAGGCG 1351 CAACGCAACC GCGAATGGAA TGTCTCGCTG
GCTTTGAGCC ACGACAAGTT 1401 GTCGTACAAA GGTATCGTGC CGGCGTTGAA
TTATCGTTTC GGCAGGACGG 1451 AAAGTAATGT GCCGTATGCG AAACGCCGCA
ACAGCGAGGT GTTTGTGTCG 1501 GCGGATTGGC GGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2872; ORF
935>:
TABLE-US-03370 m935.pep 1 MLYFRYGFLV VWCAAGVSAA YGADAPAILD
DKALLQVQRS VSDKWAESDW 51 KVENDAPRVV DGDFLLAHPK MLEHSLRDAL
NGNQADLIAS LADLYAKLPD 101 YDAVLYGRAR ALLAKLAGRP AEAVARYREL
HGENAADERI LLDLAAAEFD 151 DFRLKSAERH FAEAAKLDLP APVLENVGRF
RKKTEGLTGW RFSGGISPAV 201 NRNANNAAPQ YCRQNGGRQI CSVSRAERAA
GLNYEIEAEK LTPLADNHYL 251 LFRSNIGGTS YYFSKKSAYD DGFGRAYLGW
QYKNARQTAG ILPFYQVQLS 301 GSDGFDAKTK RVNNRRLPPY MLAHGVGVQL
SHTYRPNPGW QFSVALEHYR 351 QRYREQDRAE YNNGRQDGFY VSSAKRLGES
ATVFGGWQFV RFVPKRETVG 401 GAVNNAAYRR NGVYAGWAQE WRQLGGLNSR
VSASYARRNY KGIAAFSTEA 451 QRNREWNVSL ALSHDKLSYK GIVPALNYRF
GRTESNVPYA KRRNSEVFVS 501 ADWRF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2873>:
TABLE-US-03371 a935.seq 1 ATGTTGTATT TCAGATACGG TTTTTTGGTT
GTTTGGTGTG CGGCAGGTGT 51 TTCTGCCGCC TATGGGGCGG ATGCGCCCGC
GATTTTGGAT GACAAGGCAT 101 TGTTGCAGGT GCAGCGGTCG GTGTCGGATA
AGTGGGCGGA ATCGGATTGG 151 AAAGTTGACA ATGATGCCCC GCGCGTGGTT
GACGGGGATT TTTTGTTGGC 201 GCATCCGAAA ATGTTGGAAC ATAGTTTGCG
CGACGTGCTC AACGGCAATC 251 AGGCGGATTT GATCGCTTCG TTGGCGGATT
TGTATGCCAA GCTGCCGGAT 301 TATGACGCGG TTTTGTACGG CAGGGCGCGG
GCTTTGCTGG CGAAATTGGC 351 GGGAAGGCCG GCGGAGGCGG TGGCGCGGTA
TCGGGAACTG CACGGGGAAA 401 ATGCGGCAGA CGAGCGGATT TTGCTGGATT
TGGCGGCGGC GGAGTTTGAC 451 GATTTCCGGC TGAAGTCGGC AGAAAGGCAT
TTTGCCGAGG CGGAAAAATT 501 GGATTTGCCG GCGCCGGTTT TGGAAAATGT
GGGGCGTTTT CGGAAAAAAG 551 CGGAGGGGCT GACGGGCTGG CGTTTTTCGG
GCGGCATCAG TCCGGCGGTC 601 AATAGAAATG CCAATAATGC CGCGCCGCAG
TATTGCCGGC AAAACGGAGG 651 CCGGCAGATA TGCAGTGTCA GCCGGGCGGA
GCGGGCGGCA GGCTTGAATT 701 ATGAAATCGA GGCGGAAAAA CTGACGGCGT
TGGCAGATAA TCATTATTTG 751 TTGTTCCGTT CCAATATCGG CGGCACGAGC
TATTATTTCA GTAAAAAATC 801 AGCTTATGAC GACGGGTTCG GCAGAGCGTA
TTTGGGTTGG CAGTATAAAA 851 ATGCACGGCA GACGGCGGGG ATTTTGCCGT
TTTATCAGGT GCAGTTGTCG 901 GGCAGCGACG GCTTTGATGC GAAAACAAAA
CGGGTAAACA ACCGCCGCCT 951 GCCGCCGTAT ATGCTGGCGC ACGGAGTCGG
CGTGCAGTTG TCCCATACTT 1001 ACCGCCCAAA CCCGGGATGG CAATTTTCGG
TCGCGCTGGA ACATTACCGC 1051 CAACGCTACC GCGAACAGGA TAGGGCGGAA
TACAATAACG GTCGGCAGGA 1101 CGGGTTTTAT GTTTCGTCGG CAAAACGTTT
GGGCGAATCG GCAACTGTGT 1151 TCGGCGGCTG GCAGTTTGTG CGGTTTGTGC
CGAAACGCGA AACGGTGGGC 1201 GGCGCGGTCA ATAATGCCGC CTACCGGCGC
AACGGTGTTT ATGCCGGCTG 1251 GGCGCAGGAG TGGCGGCAGT TGGGCGGTTT
GAACAGTCGG GTTTCCGCGT 1301 CTTATGCCCG CCGCAACTAT AAGGGCGTTG
CGGCTTTCTC GACAGAGGCG 1351 CAACGCAACC GCGAATGGAA TGTCTCGCTG
GCTTTGAGCC ACGACAAGTT 1401 GTCGTACAAA GGTATCGTGC CCGCGTTGAA
TTATCGTTTC GGCAGGACGG 1451 AAAGTAATGT GCCGTATGCG AAACGCCGCA
ACAGCGAGGT GTTTGTGTCG 1501 GCGGATTGGC GGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2874; ORF
935.a>:
TABLE-US-03372 a935.pep 1 MLYFRYGFLV VWCAAGVSAA YGADAPAILD
DKALLQVQRS VSDKWAESDW 51 KVDNDAPRVV DGDFLLAHPK MLEHSLRDVL
NGNQADLIAS LADLYAKLPD 101 YDAVLYGRAR ALLAKLAGRP AEAVARYREL
HGENAADERI LLDLAAAEFD 151 DFRLKSAERH FAEAEKLDLP APVLENVGRF
RKKAEGLTGW RFSGGISPAV 201 NRNANNAAPQ YCRQNGGRQI CSVSRAERAA
GLNYEIEAEK LTALADNHYL 251 LFRSNIGGTS YYFSKKSAYD DGFGRAYLGW
QYKNARQTAG ILPFYQVQLS 301 GSDGFDAKTK RVNNRRLPPY MLAHGVGVQL
SHTYRPNPGW QFSVALEHYR 351 QRYREQDRAE YNNGRQDGFY VSSAKRLGES
ATVFGGWQFV RFVPKRETVG 401 GAVNNAAYRR NGVYAGWAQE WRQLGGLNSR
VSASYARRNY KGVAAFSTEA 451 QRNREWNVSL ALSHDKLSYK GIVPALNYRF
GRTESNVPYA KRRNSEVFVS 501 ADWRF* m935/a935 98.8% identity in 505 aa
overlap 10 20 30 40 50 60 m935.pep
MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDKWAESDWKVENDAPRVV
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| a935
MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDKWAESDWKVDNDAPRVV 10 20
30 40 50 60 70 80 90 100 110 120 m935.pep
DGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYDAVLYGRARALLAKLAGRP
||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||| a935
DGDFLLAHPKMLEHSLRDVLNGNQADLIASLADLYAKLPDYDAVLYGRARALLAKLAGRP 70 80
90 100 110 120 130 140 150 160 170 180 m935.pep
AEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERHFAEAAKLDLPAPVLENVGRF
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| a935
AEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERHFAEAEKLDLPAPVLENVGRF 130
140 150 160 170 180 190 200 210 220 230 240 m935.pep
RKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGRQICSVSRAERAAGLNYEIEAEK
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| a935
RKKAEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGRQICSVSRAERAAGLNYEIEAEK 190
200 210 220 230 240 250 260 270 280 290 300 m935.pep
LTPLADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRAYLGWQYKNARQTAGILPFYQVQLS ||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a935
LTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRAYLGWQYKNARQTAGILPFYQVQLS 250
260 270 280 290 300 310 320 330 340 350 360 m935.pep
GSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTYRPNPGWQFSVALEHYRQRYREQDRAE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a935
GSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTYRPNPGWQFSVALEHYRQRYREQDRAE 310
320 330 340 350 360 370 380 390 400 410 420 m935.pep
YNNGRQDGFYVSSAKRLGESATVFGGWQFVRFVPKRETVGGAVNNAAYRRNGVYAGWAQE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a935
YNNGRQDGFYVSSAKRLGESATVFGGWQFVRFVPKRETVGGAVNNAAYRRNGVYAGWAQE 370
380 390 400 410 420 430 440 450 460 470 480 m935.pep
WRQLGGLNSRVSASYARRNYKGIAAFSTEAQRNREWNVSLALSHDKLSYKGIVPALNYRF
||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||| a935
WRQLGGLNSRVSASYARRNYKGVAAFSTEAQRNREWNVSLALSHDKLSYKGIVPALNYRF 430
440 450 460 470 480 490 500 m935.pep GRTESNVPYAKRRNSEVFVSADWRFX
|||||||||||||||||||||||||| a935 GRTESNVPYAKRRNSEVFVSADWRFX 490
500
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2875>:
TABLE-US-03373 g936.seq 1 ATGAAACCCA AACCACACAC CGTCCGCACC
CTGATTGCCG CCGTCCTCAG 51 CCTTGCCCTC GGCGGCTGCT TCAGCGCAGT
CGTCGGCGGG GCCGCCGTCG 101 GCGCAAAATC CGTCATCGAC CGccgAACCA
CCGgcgcgca AACCGATGac 151 aACGTTATGG CGTTGCGTAT CGAAACCACC
GCCCGTTCCT ACCTGCGCCA 201 AAACAACCAA ACCAAAGGCT ACACGCCCCA
AATCTCCGTC GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC GGACAAGTCG
CCACCGAAGG CGAAAAACAG 301 TTCGTCGGTC AGATTGCACG TTCCGAACAG
GCCGCCGAAG GCGTATACAA 351 CTACATTACC GTCGCCTCCC TGCCGCGCAC
TGCGGGCGAC ATCGCCGGCG 401 ACACTTGGAA CACGTCCAAA GTCCGCGCca
cgCTGCTGGG CATCAGCCCC 451 GCTACACAGG CGCGCGTCAA AATCATTACC
TACGGCAATG TAACCTACGT 501 TATGGGCATC CTCACCCCCG AAGAACAGGC
GCAGATTACC CAAAAAGTCA 551 GCACCAccgT CGGCGTACAA AAAGTCATTA
CCCTCTACCA AAACTACGTC 601 CAACGCTGA
This corresponds to the amino acid sequence <SEQ ID 2876; ORF
936.ng>:
TABLE-US-03374 g936.pep 1 MKPKPHTVRT LIAAVLSLAL GGCFSAVVGG
AAVGAKSVID RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ TKGYTPQISV
VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT VASLPRTAGD
IAGDTWNTSK VRATLLGISP 151 ATQARVKIIT YGNVTYVMGI LTPEEQAQIT
QKVSTTVGVQ KVITLYQNYV 201 QR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2877>:
TABLE-US-03375 m936.seq (partial) 1 ATGAAACCCA AACCGCACAC
CGTCCGCACC CTGATTGCCG CCATTTTCAG 51 CCTTGCCCTT AGCGGCTGCG
TCAGCGCAGT AATCGGAAGC GCCGCCGTCG 101 GCGCGAAATC CGCCGTCGAC
CGCCGAACCA CCGGCGCGCA AACCGACGAC 151 AACGTTATGG CGTTGCGTAT
CGAAACCACC GCCCGTTCCT ATCTGCGCCA 201 AAACAACCAA ACCAAAGGCT
ACACGCCCCA AATCTCCGTC GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC
GGACAAGTCG CCACCGAAGG CGAAAAACAG 301 TTCGTCGGTC AGATTGCACG
TTCCGAACAG GCCGCCGAAG GCGTGTACAA 351 CTATATTACC GTCGCCTCCC
TGCCGCGCAC TGCC...
This corresponds to the amino acid sequence <SEQ ID 2878; ORF
936>:
TABLE-US-03376 m936.pep (partial) 1 MKPKPHTVRT LIAAIFSLAL
SGCVSAVIGS AAVGAKSAVD RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ
TKGYTPQISV VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT
VASLPRTA...
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 936
shows 93.8% identity over a 128 aa overlap with a predicted ORF
(ORF 936.ng) from N. gonorrhoeae:
TABLE-US-03377 m936/g936 10 20 30 40 50 60 m936.pep
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
||||||||||||||::||||:|| |||:|:|||||||::||||||||||||||||||||| g936
MKPKPHTVRTLIAAVLSLALGGCFSAVVGGAAVGAKSVIDRRTTGAQTDDNVMALRIETT 10 20
30 40 50 60 70 80 90 100 110 120 m936.pep
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g936
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT 70 80
90 100 110 120 130 m936.pep VASLPRTAXXX |||||||| g936
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIITYGNVTYVMGILTPEEQAQIT 130
140 150 160 170 180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2879>:
TABLE-US-03378 a936.seq 1 ATGAAACCCA AACCGCACAC CGTCCGCACC
CTGACTGCCG CCGTCCTCAG 51 CCTTGCCCTC GGCGGCTGCG TCAGCGCAGT
CGTCGGCGGC GCGGCGGTCG 101 GCGCGAAATC CGCCGTCGAC CGCCGAACCA
CCGGCGCGCA AACCGACGAC 151 AACGTAATGG CGCTGCGTAT CGAAACCACC
GCCCGCTCCT ATCTGCGCCA 201 AAACAACCAA ACCAAAGGCT ACACGCCCCA
AATCTCCGTT GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC GGACAAGTCG
CCACCGAAGG CGAGAAACAG 301 TTCGTCGGTC AGATTGCACG TTCCGAACAG
GCCGCCGAAG GCGTGTACAA 351 CTACATTACC GTCGCCTCCC TGCCGCGCAC
TGCCGGCGAC ATCGCCGGCG 401 ACACTTGGAA CACATCCAAA GTCCGCGCCA
CGCTGTTGGG CATCAGCCCC 451 GCCACACAGG CGCGCGTCAA AATCGTTACC
TACGGCAACG TAACCTACGT 501 TATGGGCATC CTCACCCCCG AAGAACAGGC
GCAGATTACC CAAAAAGTCA 551 GCACCACCGT CGGCGTACAA AAAGTCATCA
CCCTCTACCA AAACTACGTC 601 CAACGCTGA
This corresponds to the amino acid sequence <SEQ ID 2880; ORF
936.a>:
TABLE-US-03379 a936.pep 1 MKPKPHTVRT LTAAVLSLAL GGCVSAVVGG
AAVGAKSAVD RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ TKGYTPQISV
VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT VASLPRTAGD
IAGDTWNTSK VRATLLGISP 151 ATQARVKIVT YGNVTYVMGI LTPEEQAQIT
QKVSTTVGVQ KVITLYQNYV 201 QR* m936/a936 95.3% identity in 128 aa
overlap 10 20 30 40 50 60 m936.pep
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
||||||||||| ||::||||:||||||:|:|||||||||||||||||||||||||||||| a936
MKPKPHTVRTLTAAVLSLALGGCVSAVVGGAAVGAKSAVDRRTTGAQTDDNVMALRIETT 10 20
30 40 50 60 70 80 90 100 110 120 m936.pep
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a936
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT 70 80
90 100 110 120 m936.pep VASLPRTA |||||||| a936
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT 130
140 150 160 170 180
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2881>:
TABLE-US-03380 g936-1.seq 1 ATGAAACCCA AACCACACAC CGTCCGCACC
CTGATTGCCG CCGTCCTCAG 51 CCTTGCCCTC GGCGGCTGCT TCAGCGCAGT
CGTCGGCGGG GCCGCCGTCG 101 GCGCAAAATC CGTCATCGAC CGccgAACCA
CCGgcgcgca AACCGATGac 151 aACGTTATGG CGTTGCGTAT CGAAACCACC
GCCCGTTCCT ACCTGCGCCA 201 AAACAACCAA ACCAAAGGCT ACACGCCCCA
AATCTCCGTC GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC GGACAAGTCG
CCACCGAAGG CGAAAAACAG 301 TTCGTCGGTC AGATTGCACG TTCCGAACAG
GCCGCCGAAG GCGTATACAA 351 CTACATTACC GTCGCCTCCC TGCCGCGCAC
TGCGGGCGAC ATCGCCGGCG 401 ACACTTGGAA CACGTCCAAA GTCCGCGCca
cgCTGCTGGG CATCAGCCCC 451 GCTACACAGG CGCGCGTCAA AATCATTACC
TACGGCAATG TAACCTACGT 501 TATGGGCATC CTCACCCCCG AAGAACAGGC
GCAGATTACC CAAAAAGTCA 551 GCACCAccgT CGGCGTACAA AAAGTCATTA
CCCTCTACCA AAACTACGTC 601 CAACGCTGA
This corresponds to the amino acid sequence <SEQ ID 2882; ORF
936-1.ng>:
TABLE-US-03381 g936-1.pep 1 MKPKPHTVRT LIAAVLSLAL GGCFSAVVGG
AAVGAKSVID RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ TKGYTPQISV
VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT VASLPRTAGD
IAGDTWNTSK VRATLLGISP 151 ATQARVKIIT YGNVTYVMGI LTPEEQAQIT
QKVSTTVGVQ KVITLYQNYV 201 QR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2883>:
TABLE-US-03382 m936-1.seq 1 ATGAAACCCA AACCGCACAC CGTCCGCACC
CTGATTGCCG CCATTTTCAG 51 CCTTGCCCTT AGCGGCTGCG TCAGCGCAGT
AATCGGAAGC GCCGCCGTCG 101 GCGCGAAATC CGCCGTCGAC CGCCGAACCA
CCGGCGCGCA AACCGACGAC 151 AACGTTATGG CGTTGCGTAT CGAAACCACC
GCCCGTTCCT ATCTGCGCCA 201 AAACAACCAA ACCAAAGGCT ACACGCCCCA
AATCTCCGTC GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC GGACAAGTCG
CCACCGAAGG CGAAAAACAG 301 TTCGTCGGTC AGATTGCACG TTCCGAACAG
GCCGCCGAAG GCGTGTACAA 351 CTATATTACC GTCGCCTCCC TGCCGCGCAC
TGCCGGCGAC ATCGCCGGCG 401 ACACTTGGAA CACATCCAAA GTCCGCGCCA
CGCTGTTGGG CATCAGCCCC 451 GCCACACAGG CGCGCGTCAA AATCGTTACC
TACGGCAACG TAACCTACGT 501 TATGGGCATC CTCACCCCCG AAGAACAGGC
GCAGATTACC CAAAAAGTCA 551 GCACCACCGT CGGCGTACAA AAAGTCATCA
CCCTCTACCA AAACTACGTC 601 CAACGCTGA
This corresponds to the amino acid sequence <SEQ ID 2884; ORF
936-1>:
TABLE-US-03383 m936-1.pep 1 MKPKPHTVRT LIAAIFSLAL SGCVSAVIGS
AAVGAKSAVD RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ TKGYTPQISV
VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT VASLPRTAGD
IAGDTWNTSK VRATLLGISP 151 ATQARVKIVT YGNVTYVMGI LTPEEQAQIT
QKVSTTVGVQ KVITLYQNYV 201 QR* m936-1/g936-1 95.5% identity in 202
aa overlap 10 20 30 40 50 60 m936-1.pep
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
||||||||||||||::||||:|| |||:|:|||||||::||||||||||||||||||||| g936-1
MKPKPHTVRTLIAAVLSLALGGCFSAVVGGAAVGAKSVIDRRTTGAQTDDNVMALRIETT 10 20
30 40 50 60 70 80 90 100 110 120 m936-1.pep
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g936-1
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT 70 80
90 100 110 120 130 140 150 160 170 180 m936-1.pep
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| g936-1
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIITYGNVTYVMGILTPEEQAQIT 130
140 150 160 170 180 190 200 m936-1.pep QKVSTTVGVQKVITLYQNYVQRX
||||||||||||||||||||||| g936-1 QKVSTTVGVQKVITLYQNYVQRX 190 200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2885>:
TABLE-US-03384 a936-1.seq 1 ATGAAACCCA AACCGCACAC CGTCCGCACC
CTGACTGCCG CCGTCCTCAG 51 CCTTGCCCTC GGCGGCTGCG TCAGCGCAGT
CGTCGGCGGC GCGGCGGTCG 101 GCGCGAAATC CGCCGTCGAC CGCCGAACCA
CCGGCGCGCA AACCGACGAC 151 AACGTAATGG CGCTGCGTAT CGAAACCACC
GCCCGCTCCT ATCTGCGCCA 201 AAACAACCAA ACCAAAGGCT ACACGCCCCA
AATCTCCGTT GTCGGCTACA 251 ACCGCCACCT GCTGCTGCTC GGACAAGTCG
CCACCGAAGG CGAGAAACAG 301 TTCGTCGGTC AGATTGCACG TTCCGAACAG
GCCGCCGAAG GCGTGTACAA 351 CTACATTACC GTCGCCTCCC TGCCGCGCAC
TGCCGGCGAC ATCGCCGGCG 401 ACACTTGGAA CACATCCAAA GTCCGCGCCA
CGCTGTTGGG CATCAGCCCC 451 GCCACACAGG CGCGCGTCAA AATCGTTACC
TACGGCAACG TAACCTACGT 501 TATGGGCATC CTCACCCCCG AAGAACAGGC
GCAGATTACC CAAAAAGTCA 551 GCACCACCGT CGGCGTACAA AAAGTCATCA
CCCTCTACCA AAACTACGTC 601 CAACGCTGA
This corresponds to the amino acid sequence <SEQ ID 2886; ORF
936-1.a>:
TABLE-US-03385 a936-1.pep 1 MKPKPHTVRT LTAAVLSLAL GGCVSAVVGG
AAVGAKSAVD RRTTGAQTDD 51 NVMALRIETT ARSYLRQNNQ TKGYTPQISV
VGYNRHLLLL GQVATEGEKQ 101 FVGQIARSEQ AAEGVYNYIT VASLPRTAGD
IAGDTWNTSK VRATLLGISP 151 ATQARVKIVT YGNVTYVMGI LTPEEQAQIT
QKVSTTVGVQ KVITLYQNYV 201 QR* a936-1/m936-1 97.0% identity in 202
aa overlap 10 20 30 40 50 60 m936-1.pep
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
||||||||||| ||::||||:||||||:|:|||||||||||||||||||||||||||||| a936-1
MKPKPHTVRTLTAAVLSLALGGCVSAVVGGAAVGAKSAVDRRTTGAQTDDNVMALRIETT 10 20
30 40 50 60 70 80 90 100 110 120 m936-1.pep
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a936-1
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT 70 80
90 100 110 120 130 140 150 160 170 180 m936-1.pep
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a936-1
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT 130
140 150 160 170 180 190 200 m936-1.pep QKVSTTVGVQKVITLYQNYVQRX
||||||||||||||||||||||| a936-1 QKVSTTVGVQKVITLYQNYVQRX 190 200
The following partial DNA sequence was identified in N.gonorrhoeae
<SEQ ID 2887>:
TABLE-US-03386 g937.seq 1 atGAAAAATA TTCTCTTAgt ATTTGTTAGC
TTTGTGCCAT TATGTGTCCG 51 CACTGATCTG CCGCTGAata tCGAAGACAT
AATGaccgAC AAGGGAAAAT 101 GGAAactGGA AACTTccctt acctacctgA
acaGCGAAAA cagCCGCGCC 151 GCACTTGCCT CACCGGTTTA CATTCAGACC
GGCTCCGCTT CCTTTATCCC 201 CGTCCCGACC GAAATTCAGG AAAACGGCAG
CAATACCGAT ATGCTCGCCG 251 GCACGCTCGG TTTGCGCTAC GGACTGAccg
GCAataccgA CATTTACGGC 301 AGCGGCAGCT ATCTGTGGCA CGAAGAACGC
AAACTCGacg GCAACGGCAA 351 AACCCGCAAC AAACGGATGT CCGACATATC
CGCCGGCATC AGCCACACCT 401 TCCttaAAGa cgGCAAAAAT CCCGCACTCA
TCGCTTTCCT CGAAAGCACG 451 GTTTACGAAA AATCGCGCAA CAAAGCCTCG
TCGGGAAAAT CGTGGCTCAT 501 CGGCGCCACC ACCTACAAAG CCATAGATCC
GATTGTCCTT TCCCTCACCG 551 CCGCCTACCG CATCAACGGC AGCAAAACCC
TTTCAGACGA CGTCAAATAC 601 AAAGCAGGCA ATTACTGGAT GCTGAATCCC
AACATCTCAT TTGCCGCCAA 651 CGACAGAATC AGCCTGACCG GAGGCATCCA
ATGGCTGGGC AAACAGCCCG 701 ACCGCATAGA CGGCAAAAAA GAATCCGCAA
GAAACACATC CACCTACGCC 751 CATTTCGGCG CAGGTTTCGG TTTCACCAAA
ACCGCGGCTT TAAACGCATC 801 CGCACGTTTC AACGTTTCAG GGCAAAGCAG
TTCCGAACTG AAATTGGGCG 851 TACAGCATAC ATTTTAA
This corresponds to the amino acid sequence <SEQ ID 2888; ORF
937.ng>:
TABLE-US-03387 g937.pep 1 MKNILLVFVS FVPLCVRTDL PLNIEDIMTD
KGKWKLETSL TYLNSENSRA 51 ALASPVYIQT GSASFIPVPT EIQENGSNTD
MLAGTLGLRY GLTGNTDIYG 101 SGSYLWHEER KLDGNGKTRN KRMSDISAGI
SHTFLKDGKN PALIAFLEST 151 VYEKSRNKAS SGKSWLIGAT TYKAIDPIVL
SLTAAYRING SKTLSDDVKY 201 KAGNYWMLNP NISFAANDRI SLTGGIQWLG
KQPDRIDGKK ESARNTSTYA 251 HFGAGFGFTK TAALNASARF NVSGQSSSEL
KLGVQHTF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2889>:
TABLE-US-03388 m937.seq 1 ATGAAGCGCA TCTTTTTGCC CGCCTTGCCC
GCCATCCTGC CTTTATCCAC 51 TTATGCCGAC CTGCCCTTGA CGATTGAAGA
CATAATGACC GACAAGGGAA 101 AATGGAAACT GGAAACTTCC CTTACCTACC
TGAACAGCGA AAACAACCGC 151 GCCGAACTTG CCGCACCGGT TTACATTCAA
ACCGGCGCAA CCTCGTTTAT 201 CCCCATTCCG ACCGAAATCC AAgAAAaCGG
CAGCAATACC GATATGCTCG 251 TCGGCACGCT CGGTTTGCGC TACGGACTGA
CCGGGAATAC CGACATTTAC 301 GGCAGCGGCA GCTATCTGTG GCACGAAGAA
CGCAAACTCG ACGGCAACAG 351 CAAAACCCGC AACAAACGGA TGTCCGACGT
ATCCCTCGGC ATCAGCCACA 401 CTTTCCTTAA AGACGACAAA AACCCCGCCC
TAATCAGCTT TCTTGAAAGC 451 ACGGTTTACG AAAAATCGCG CAACAAAGCC
TCGTCGGGAA AATCCTGGCT 501 CATCGGCGCC ACCACCTACA AAGCCATAGA
TCCGATTGTC CTTTCCTTAA 551 CCGCCGCCTA CCGCATCAAC GGCAGCAAAA
CCCTTTCAGA CGGCATCCGC 601 TACAAATCGG GCAACTACCT GCTGCTCAAC
CCCAACATCT CATTTGCTGC 651 CAACGACAGA ATCAGCCTGA CCGGAGGCAT
CCAATGGCTG GGCAGGCAGC 701 CCGACCGGAC GGACGGCAAA CGGGAATCCT
CCAGAAACAC ATCCACCTAC 751 GCCCATTTCG GCGCAGGTTT CGGTTTCACC
AAAACCACGG CTTTAAACGC 801 ATCCGCACGT TTCAACGTTT CAGGGCAAAG
CAGTTCCGAA CTGAAATTTG 851 GCGTACAGCA TACATTTTAA
This corresponds to the amino acid sequence <SEQ ID 2890; ORF
937>:
TABLE-US-03389 m937.pep.. 1 MKRIFLPALP AILPLSTYAD LPLTIEDIMT
DKGKWKLETS LTYLNSENNR 51 AELAAPVYIQ TGATSFIPIP TEIQENGSNT
DMLVGTLGLR YGLTGNTDIY 101 GSGSYLWHEE RKLDGNSKTR NKRMSDVSLG
ISHTFLKDDK NPALISFLES 151 TVYEKSRNKA SSGKSWLIGA TTYKAIDPIV
LSLTAAYRIN GSKTLSDGIR 201 YKSGNYLLLN PNISFAANDR ISLTGGIQWL
GRQPDRTDGK RESSRNTSTY 251 AHFGAGFGFT KTTALNASAR FNVSGQSSSE
LKFGVQHTF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N.gonorrhoeae ORF 937
shows 86.9% identity over a 289 aa overlap with a predicted ORF
(ORF 937.ng) from N. gonorrhoeae:
TABLE-US-03390 g937/m937 10 20 30 40 50 59 g937.pep
MKNILL-VFVSFVPLCVRTDLPLNIEDIMTDKGKWKLETSLTYLNSENSRAALASPVYIQ || |:|
:: :::|| : :||||:||||||||||||||||||||||||:|| ||:||||| m937
MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ 10 20
30 40 50 60 60 70 80 90 100 110 119 g937.pep
TGSASFIPVPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNGKTR ||:
:||||:||||||||||||||:||||||||||||||||||||||||||||||||:||| m937
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNSKTR 70 80
90 100 110 120 120 130 140 150 160 170 179 g937.pep
NKRMSDISAGISHTFLKDGKNPALIAFLESTVYEKSRNKASSGKSWLIGATTYKAIDPIV
||||||:| ||||||||| ||||||:|||||||||||||||||||||||||||||||||| m937
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPIV 130
140 150 160 170 180 180 190 200 210 220 230 239 g937.pep
LSLTAAYRINGSKTLSDDVKYKAGNYWMLNPNISFAANDRISLTGGIQWLGKQPDRIDGK
||||||||||||||||| ::||:||| :|||||||||||||||||||||||:|||| ||| m937
LSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAANDRISLTGGIQWLGRQPDRTDGK 190
200 210 220 230 240 240 250 260 270 280 289 g937.pep
KESARNTSTYAHFGAGFGFTKTAALNASARFNVSGQSSSELKLGVQHTFX
:||:||||||||||||||||||:|||||||||||||||||||:||||||| m937
RESSRNTSTYAHFGAGFGFTKTTALNASARFNVSGQSSSELKFGVQHTFX 250 260 270
280
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2891>:
TABLE-US-03391 a937.seq 1 ATGAAGCGCA TCTTTTTGCC CGCCTTGCCC
GCCATCCTGC CTTTATCCGC 51 TTATGCCGAC CTGCCCTTGA CGATTGAAGA
CATAATGACC GACAAGGGCA 101 AATGGAAACT GGAAACTTCC CTTACCTACC
TGAACAGCGA AAACAACCGC 151 GCCGAACTTG CCGCACCGGT TTACATCCAA
ACCGGCGCAA CCTCGTTTAT 201 CCCCATTCCG ACCGAAATCC AAGAAAACGG
CAGCAATACC GATATGCTCG 251 TTGGCACGCT CGGTTTGCGC TACGGACTGA
CCGGGAATAC CGACATTTAC 301 GGCAGCGGCA GCTATCTGTG GCACGAAGAA
CGCAAACTCG ACGGCAACGG 351 CAAAACCCGA AACAAACGGA TGTCCGACGT
ATCCCTCGGC ATCAGCCACA 401 CCTTCCTTAA AGACGACAAA AACCCCGCCC
TAATCAGCTT TCTTGAAAGC 451 ACGGTTTACG AAAAATCGCG CAACAAAGCC
TCGTCGGGAA AATCCTGGCT 501 CATCGGCGCC ACCACCTACA AAGCCATCGA
CCCCGTCGTC CTCTCATTGA 551 CCGCTGCCTA CCGTATCAAC GGCAGCAAAA
CCCTTTCAAG CAACACCAAA 601 TACAAAGCAG GCAATTACTG GATGCTGAAT
CCCAATATAT CCTTCGCCGC 651 CAACGACAGA ATCAGCCTCA CGGGCGGCAT
CCAATGGCTG GGCAAGCAGC 701 CCGACCGTCT GGACGGCAAA AAAGAATCCG
CAAGAAACAC ATCCACCTAT 751 GCCCATTTCG GCGCAGGTTT CGGTTTCACC
AAAACCACGG CTTTAAACGC 801 ATCCGCACGT TTCAACGTTT CAGGGCAAAG
CAGTTCCGAA CTGAAATTTG 851 GCGTACAGCA TACGTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2892; ORF
937.a>:
TABLE-US-03392 a937.pep 1 MKRIFLPALP AILPLSAYAD LPLTIEDIMT
DKGKWKLETS LTYLNSENNR 51 AELAAPVYIQ TGATSFIPIP TEIQENGSNT
DMLVGTLGLR YGLTGNTDIY 101 GSGSYLWHEE RKLDGNGKTR NKRMSDVSLG
ISHTFLKDDK NPALISFLES 151 TVYEKSRNKA SSGKSWLIGA TTYKAIDPVV
LSLTAAYRIN GSKTLSSNTK 201 YKAGNYWMLN PNISFAANDR ISLTGGIQWL
GKQPDRLDGK KESARNTSTY 251 AHFGAGFGFT KTTALNASAR FNVSGQSSSE
LKFGVQHTF* m937/a937 95.2% identity in 289 aa overlap 10 20 30 40
50 60 m937.pep
MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| a937
MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYLNSENNRAELAAPVYIQ 10 20
30 40 50 60 70 80 90 100 110 120 m937.pep
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNSKTR
||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||| a937
TGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGSGSYLWHEERKLDGNGKTR 70 80
90 100 110 120 130 140 150 160 170 180 m937.pep
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPIV
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a937
NKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKASSGKSWLIGATTYKAIDPVV 130
140 150 160 170 180 190 200 210 220 230 240 m937.pep
LSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAANDRISLTGGIQWLGRQPDRTDGK
||||||||||||||||:: :||:||| :|||||||||||||||||||||||:|||| ||| a937
LSLTAAYRINGSKTLSSNTKYKAGNYWMLNPNISFAANDRISLTGGIQWLGKQPDRLDGK 190
200 210 220 230 240 250 260 270 280 290 m937.pep
RESSRNTSTYAHFGAGFGFTKTTALNASARFNVSGQSSSELKFGVQHTFX
:||:|||||||||||||||||||||||||||||||||||||||||||||| a937
KESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQSSSELKFGVQHTFX 250 260 270 280
290
[0443] g939.seq not found yet
[0444] g939.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2893>:
TABLE-US-03393 m939.seq (partial) 1 ATGAAACGAT TGACTTTATT
GGCCTTTGTT TTGGCTGCCG GTGCGGTTTC 51 CGCCTCTCCC AAAGCAGACG
TGGAAAAAGG CAAACAGGTT GCCGCAACGG 101 TTTGTGCGGC TTGCCATGCA
GCAGACGGTA ACAGCGGCAT TGCGATGTAT 151 CCGCGTTTGG CGGCACAGCA
TACTGCTTAC ATCTATCATC AAACTATCGG 201 CATCCGCGAC GTAAACGCAC
CC...
This corresponds to the amino acid sequence <SEQ ID 2894; ORF
939>:
TABLE-US-03394 m939.pep (partial) 1 MKRLTLLAFV LAAGAVSASP
KADVEKGKQV AATVCAACHA ADGNSGIAMY 51 PRLAAQHTAY IYHQTIGIRD
VNAP...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2895>:
TABLE-US-03395 a939.seq 1 ATGAAACGAT TGACTTTATT GGCCTTTGTT
TTGGCTGCCG GTGCGGTTTC 51 CGCATCTCCC AAAGCAGACG TGGAAAAAGG
CAAACAGGTT GCCGCAACGG 101 TTTGTGCGGC TTGCCATGCA GCAGACGGTA
ACAGCGGCAT TGCGATGTAT 151 CCGCGTTTGG CGGCACAGCA TACTGCTTAC
ATCTATCATC AAACCATCGG 201 CATCCGCGAC GGTAAACGCA CCCACGGTTC
GGCAGCTGTG ATGAAACCGG 251 TGGTAATGAA TTTGAGCGAT CAGGATATTT
TGAACGTATC CGCATTCTAT 301 GCCAAACAGC AGCCCAAATC CGGTGAAGCC
AATCCTAAGG AAAATCCCGA 351 ATTGGGTGCG AAAATCTATC GCGGCGGTTT
GAGCGATAAA AAAGTGCCGG 401 CGTGTATGTC CTGCCACGGT CCGAGCGGTG
CGGGTATGCC GGGGGGCGGA 451 AGCGAAATTC AGGCTTATCC GCGTTTGGGC
GGTCAGCATC AGGCATATAT 501 TGTTGAACAG ATGAATGCCT ACAAGTCCGG
TCAGCGTAAA AATACCATCA 551 TGGAAGATAT TGCAAACCGT ATGTCTGAAG
AAGATTTGAA AGCGGTCGCC 601 AACTTTATCC AAGGTTTGCG TTAA
This corresponds to the amino acid sequence <SEQ ID 2896; ORF
939.a>:
TABLE-US-03396 a939.pep 1 MKRLTLLAFV LAAGAVSASP KADVEKGKQV
AATVCAACHA ADGNSGIAMY 51 PRLAAQHTAY IYHQTIGIRD GKRTHGSAAV
MKPVVMNLSD QDILNVSAFY 101 AKQQPKSGEA NPKENPELGA KIYRGGLSDK
KVPACMSCHG PSGAGMPGGG 151 SEIQAYPRLG GQHQAYIVEQ MNAYKSGQRK
NTIMEDIANR MSEEDLKAVA 201 NFIQGLR* m939/a939 100.0% identity in 70
aa overlap 10 20 30 40 50 60 m939.pep
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a939
MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGNSGIAMYPRLAAQHTAY 10 20
30 40 50 60 70 m939.pep IYHQTIGIRDVNAP |||||||||| a939
IYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAKQQPKSGEANPKENPELGA 70 80
90 100 110 120
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2897>:
TABLE-US-03397 g950.seq 1 ATGAACAAAA ATATTGCTGC CGCACTCGCC
GGTGCTTTAT CCCTGTCTCT 51 GGCCGCCGGC GCCGTTGCCG CCCACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCAAAAATC CGCCCAAGGC TCTTGCGGCG
CATCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CATCCAAATC TGCCGAAGGT
TCGTGCGGCG CGGCTGCTTC 201 TAAAGCAGGC GAAGGCAAAT GCGGCGAGGG
CAAATGCGGT GCAACTGTAA 251 AAAAAGCCCA CAAACACACC AAAGCATCTA
AAGCCAAAGC CAAATCTGCC 301 GAAGGCAAAT GCGGCGAAGG CAAATGCGGT
TCTAAATAA
This corresponds to the amino acid sequence <SEQ ID 2898; ORF
950.ng>:
TABLE-US-03398 g950.pep 1 MNKNIAAALA GALSLSLAAG AVAAHKPASN
ATGVQKSAQG SCGASKSAEG 51 SCGASKSAEG SCGAAASKAG EGKCGEGKCG
ATVKKAHKHT KASKAKAKSA 101 EGKCGEGKCG SK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2899>:
TABLE-US-03399 m950.seq 1 ATGAACAAAA ACATTGCTGC CGCTCTCGCC
GGTGCTTTAT CCCTGTCTTT 51 GGCCGCCGGT GCAGTTGCTG CCAACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCATAAATC CGCCCATGGC TCTTGCGGCG
CGTCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CGGCTGGTTC TAAAGCAGGC
GAAGGCAAAT GCGGCGAGGG 201 CAAATGCGGT GCGACCGTAA AAAAAACCCA
CAAACACACC AAAGCATCTA 251 AAGCCAAGGC CAAATCTGCC GAAGGCAAAT
GCGGCGAAGG CAAATGCGGT 301 TCTAAATAA
This corresponds to the amino acid sequence <SEQ ID 2900; ORF
950>:
TABLE-US-03400 m950.pep 1 MNKNIAAALA GALSLSLAAG AVAANKPASN
ATGVHKSAHG SCGASKSAEG 51 SCGAAGSKAG EGKCGEGKCG ATVKKTHKHT
KASKAKAKSA EGKCGEGKCG 101 SK
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 950
shows 86.6% identity over a 112 aa overlap with a predicted ORF
(ORF 950) from N. gonorrhoeae
TABLE-US-03401 m950/g950 86.6% identity in 112 aa overlap 10 20 30
40 50 m950.pep
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGA------
||||||||||||||||||||||||:|||||||||:|||:||||||||||||||| g950
MNKNIAAALAGALSLSLAAGAVAAHKPASNATGVQKSAQGSCGASKSAEGSCGASKSAEG 10 20
30 40 50 60 60 70 80 90 100 m950.pep
----AGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
|:|||||||||||||||||||:|||||||||||||||||||||||||| g950 SCGAAASKAG
EGKCGEGKCG ATVKKAHKHT KASKAKAKSA EGKCGEGKCG SKX 70 80 90 100
110
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2901>:
TABLE-US-03402 a950.seq 1 ATGAACAAAA ACATTGCTGC CGCACTCGCC
GGTGCTTTAT CCCTGTCTTT 51 GGCCGCCGGT GCAGTTGCTG CCAACAAACC
GGCAAGCAAC GCAACAGGCG 101 TTCATAAATC CGCCCATGGC TCTTGCGGCG
CGTCCAAATC TGCCGAAGGT 151 TCGTGCGGCG CGGCTGGTTC TAAAGCAGGC
GAAGGCAAAT GCGGCGAGGG 201 CAAATGCGGT GCGACCGTAA AAAAAACCCA
CAAACACACC AAAGCATCTA 251 AAGCCAAGGC CAAATCTGCC GAAGGCAAAT
GCGGCGAAGG CAAATGCGGT 301 TCTAAATAA
This corresponds to the amino acid sequence <SEQ ID 2902; ORF
950.a>:
TABLE-US-03403 a950.pep 1 MNKNIAAALA GALSLSLAAG AVAANKPASN
ATGVHKSAHG SCGASKSAEG 51 SCGAAGSKAG EGKCGEGKCG ATVKKTHKHT
KASKAKAKSA EGKCGEGKCG 101 SK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 950
shows 100.0% identity over a 102 aa overlap with a predicted ORF
(ORF 950) from N. meningitidis
TABLE-US-03404 a950/m950 100.0% identity in 102 aa overlap 10 20 30
40 50 60 a950.pep
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGAAGSKAG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m950
MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGASKSAEGSCGAAGSKAG 10 20
30 40 50 60 70 80 90 100 a950.pep
EGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSKX
|||||||||||||||||||||||||||||||||||||||||| m950
EGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK 70 80 90 100
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2903>:
TABLE-US-03405 g951.seq 1 ATGATTATGT TACCCGCCCG TTTCACTATT
TTATCTGTCC TCGCAGCAGC 51 CCTGCTTGCC GGACAGGCGT ATGCTGCCGG
CGCGGCGGAT GTGGAGCTGC 101 CGAAGGAAGT CGGAAAGGTT TTAAGGAAAC
ATCGGCGTTA CAGCGAGGAA 151 GAAATCAAAA ACGAACGCGC ACGGCTTGCG
GCAGTGGGCG AACGGGTCAA 201 CAGGGTGTTT ACGCTGTTGG GCGGTGAAAC
GGCTTTGCAG AAAGGGCAGG 251 CGGGAACGGC TCTGGCAACC TATATGCTGA
TGTTGGAACG CACAAAATCC 301 CCCGAAGTCG CCGAACGCGC CTTGGAAATG
GCCGTGTCGC TGAACGCGTT 351 TGAACAGGCG GAAATGATTT ATCAGAAATG
GCGGCAGATC GAGCCTATAC 401 CGGGTGAGGC GCAAAAACGG GCGGGGTGGC
TGCGGAACGT ATTGAGGGAA 451 GGGGGAAATC AGCATCTGGA CGGGTTGGAA
GAGGTGCTGG CGCAATCGGA 501 CGATGTGCAA AAACGCAGGA TATTTTTGCT
GCTGGTGCAA GCCGCCGTGC 551 AGCAGGGTGG GGTGGCTCAA AAAGCATCGA
AAGCGGTTCG CCGTGCGGCG 601 TTGAAGTATG AACATCTGCC CGAAGCGGCG
GTTGCCGATG CGGTGTTCGG 651 CGTACAGGGA CGCGAAAAGG AAAAGGCAAT
CGAAGCTTTG CAGCGTTTGG 701 CGAAGCTCGA TACGGAAATA TTGCCCCCCA
CTTTAATGAC GTTGCGTCTG 751 ACTGCACGCA AATATCCCGA AATACTCGAC
GGCTTTTTCG AGCAGACAGA 801 CACCCAAAAC CTTTCGGCCG TCTGGCAGGA
AATGGAAATT ATGAATCTGG 851 TTTCCCTGCG TAAGCCGGAT GATGCCTATG
CGCGTTTGAA CGTGCTGTTG 901 GAACACAACC CGAATGCAAA CCTGTATATT
CAGGCGGCGA TATTGGCGGC 951 AAACCGAAAA GAAGGTGCGT CCGTTATCGA
CGGCTACGCC GAAAAGGCAT 1001 ACGGCAGGGG GACGGGGGAA CAGCGGGGCA
GGGCGGCAAT GACGGCGGCG 1051 ATGATATATG CCGACCGCAG GGATTACGCC
AAAGTCAGGC AGTGGTTGAA 1101 AAAAGTGTCC GCGCCGGAAT ACCTGTTCGA
CAAAGGCGTG CTGGCGGCTG 1151 CGGCGGCTGC CGAATTGGAC GGAGGCCGGG
CGGCTTTGCG GCAGATCGGC 1201 AGGGTGCGGA AACTTCCCGA ACAGCAGGGG
CGGTATTTTA CGGCAGACAA 1251 TTTGTCCAAA ATACAGATGC TCGCCCTGTC
GAAGCTGCCC GACAAACGGG 1301 AAGCCCTGAT CGGGCTGAAC AACATCATCG
CCAAACTTTC GGCGGCGGGA 1351 AGCACGGAAC CTTTGGCGGA AGCATTGGCA
CAGCGTTCCA TTATTTACGA 1401 ACAGTTCGGC AAACGGGGAA AAATGATTGC
CGACCTTGAA ACCGCGCTCA 1451 AACTTACGCC CGATAATGCA CAAATTATGA
ATAATCTGGG CTACAGCCTG 1501 CTTTCCGATT CCAAACGTTT GGACGAGGGT
TTCGCCCTGC TTCAGACGGC 1551 ATACCAAATC AACCCGGACG ATACCGCCGT
TAACGACAGC ATAGGCTGGG 1601 CGTATTACCT GAAAGGCGAC GCGGAAAGCG
CGCTGCCGTA TCTGCGGTAT 1651 TCGTTTGAAA ACGACCCCGA GCCCGAAGTT
GCCGCCCATT TGGGCGAAGT 1701 GTTGTGGGCA TTGGGCGAAC GCGATCAGGC
GGTTGACGTA TGGACGCAGG 1751 CGGCACACCT TAGGGGAGAC AAGAAAATAT
GGCGGGAGAC GCTCAAACGC 1801 TACGGAATCG CCTTGCCCGA GCCTTCCCGA
AAACCCCGGA AATAA
This corresponds to the amino acid sequence <SEQ ID 2904; ORF
951.ng>:
TABLE-US-03406 g951.pep 1 MIMLPARFTI LSVLAAALLA GQAYAAGAAD
VELPKEVGKV LRKHRRYSEE 51 EIKNERARLA AVGERVNRVF TLLGGETALQ
KGQAGTALAT YMLMLERTKS 101 PEVAERALEM AVSLNAFEQA EMIYQKWRQI
EPIPGEAQKR AGWLRNVLRE 151 GGNQHLDGLE EVLAQSDDVQ KRRIFLLLVQ
AAVQQGGVAQ KASKAVRRAA 201 LKYEHLPEAA VADAVFGVQG REKEKAIEAL
QRLAKLDTEI LPPTLMTLRL 251 TARKYPEILD GFFEQTDTQN LSAVWQEMEI
MNLVSLRKPD DAYARLNVLL 301 EHNPNANLYI QAAILAANRK EGASVIDGYA
EKAYGRGTGE QRGRAAMTAA 351 MIYADRRDYA KVRQWLKKVS APEYLFDKGV
LAAAAAAELD GGRAALRQIG 401 RVRKLPEQQG RYFTADNLSK IQMLALSKLP
DKREALIGLN NIIAKLSAAG 451 STEPLAEALA QRSIIYEQFG KRGKMIADLE
TALKLTPDNA QIMNNLGYSL 501 LSDSKRLDEG FALLQTAYQI NPDDTAVNDS
IGWAYYLKGD AESALPYLRY 551 SFENDPEPEV AAHLGEVLWA LGERDQAVDV
WTQAAHLRGD KKIWRETLKR 601 YGIALPEPSR KPRK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2905>:
TABLE-US-03407 m951.seq 1 ATGATTATGT TACCTAACCG TTTCAAAATG
TTAACTGTGT TGACGGCAAC 51 CTTGATTGCC GGACAGGTAT CTGCCGCCGG
AGGCGGTGCG GGGGATATGA 101 AACAGCCGAA GGAAGTCGGA AAGGTTTTCA
GAAAGCAGCA GCGTTACAGC 151 GAGGAAGAAA TCAAAAACGA ACGCGCACGG
CTTGCGGCAG TGGGCGAGCG 201 GGTTAATCAG ATATTTACGT TGCTGGGAGG
GGAAACCGCC TTGCAAAAGG 251 GGCAGGCGGG AACGGCTCTG GCAACCTATA
TGCTGATGTT GGAACGCACA 301 AAATCCCCCG AAGTCGCCGA ACGCGCCTTG
GAAATGGCCG TGTCGCTGAA 351 CGCGTTTGAA CAGGCGGAAA TGATTTATCA
GAAATGGCGG CAGATTGAGC 401 CTATACCGGG TAAGGCGCAA AAACGGGCGG
GGTGGCTGCG GAACGTGCTG 451 AGGGAAAGAG GAAATCAGCA TCTGGACGGA
CTGGAAGAAG TGCTGGCTCA 501 GGCGGACGAA GGACAGAACC GCAGGGTGTT
TTTATTGTTG GCACAAGCCG 551 CCGTGCAACA GGACGGGTTG GCGCAAAAAG
CATCGAAAGC GGTTCGCCGC 601 GCGGCGTTGA AATATGAACA TCTGCCCGAA
GCGGCGGTTG CCGATGTGGT 651 GTTCAGCGTA CAGGGACGCG AAAAGGAAAA
GGCAATCGGA GCTTTGCAGC 701 GTTTGGCGAA GCTCGATACG GAAATATTGC
CCCCCACTTT AATGACGTTG 751 CGTCTGACTG CACGCAAATA TCCCGAAATA
CTCGACGGCT TTTTCGAGCA 801 GACAGACACC CAAAACCTTT CGGCCGTCTG
GCAGGAAATG GAAATTATGA 851 ATCTGGTTTC CCTGCACAGG CTGGATGATG
CCTATGCGCG TTTGAACGTG 901 CTGTTGGAAC GCAATCCGAA TGCAGACCTG
TATATTCAGG CAGCGATATT 951 GGCGGCAAAC CGAAAAGAAG GTGCTTCCGT
TATCGACGGC TACGCCGAAA 1001 AGGCATACGG CAGGGGGACG GAGGAACAGC
GGAGCAGGGC GGCGCTAACG 1051 GCGGCGATGA TGTATGCCGA CCGCAGGGAT
TACGCCAAAG TCAGGCAGTG 1101 GCTGAAAAAA GTATCCGCGC CGGAATACCT
GTTCGACAAA GGTGTGCTGG 1151 CGGCTGCGGC GGCTGTCGAG TTGGACGGCG
GCAGGGCGGC TTTGCGGCAG 1201 ATCGGCAGGG TGCGGAAACT TCCCGAACAG
CAGGGGCGGT ATTTTACGGC 1251 AGACAATTTG TCCAAAATAC AGATGCTCGC
CCTGTCGAAG CTGCCCGATA 1301 AACGGGAGGC TTTGAGGGGG TTGGACAAGA
TTATCGAAAA ACCGCCTGCC 1351 GGCAGTAATA CAGAGTTACA GGCAGAGGCA
TTGGTACAGC GGTCAGTTGT 1401 TTACGATCGG CTTGGCAAGC GGAAAAAAAT
GATTTCAGAT CTTGAAAGGG 1451 CGTTCAGGCT TGCACCCGAT AACGCTCAGA
TTATGAATAA TCTGGGCTAC 1501 AGCCTGCTGA CCGATTCCAA ACGTTTGGAC
GAAGGTTTCG CCCTGCTTCA 1551 GACGGCATAC CAAATCAACC CGGACGATAC
CGCTGTCAAC GACAGCATAG 1601 GCTGGGCGTA TTACCTGAAA GGCGACGCGG
AAAGCGCGCT GCCGTATCTG 1651 CGGTATTCGT TTGAAAACGA CCCCGAGCCC
GAAGTTGCCG CCCATTTGGG 1701 CGAAGTGTTG TGGGCATTGG GCGAACGCGA
TCAGGCGGTT GACGTATGGA 1751 CGCAGGCGGC ACACCTTACG GGAGACAAGA
AAATATGGCG GGAAACGCTC 1801 AAACGTCACG GCATCGCATT GCCCCAACCT
TCCCGAAAAC CTCGGAAATA 1851 A
This corresponds to the amino acid sequence <SEQ ID 2906; ORF
791>:
TABLE-US-03408 m951.pep 1 MIMLPNRFKM LTVLTATLIA GQVSAAGGGA
GDMKQPKEVG KVFRKQQRYS 51 EEEIKNERAR LAAVGERVNQ IFTLLGGETA
LQKGQAGTAL ATYMLMLERT 101 KSPEVAERAL EMAVSLNAFE QAEMIYQKWR
QIEPIPGKAQ KRAGWLRNVL 151 RERGNQHLDG LEEVLAQADE GQNRRVFLLL
AQAAVQQDGL AQKASKAVRR 201 AALKYEHLPE AAVADVVFSV QGREKEKAIG
ALQRLAKLDT EILPPTLMTL 251 RLTARKYPEI LDGFFEQTDT QNLSAVWQEM
EIMNLVSLHR LDDAYARLNV 301 LLERNPNADL YIQAAILAAN RKEGASVIDG
YAEKAYGRGT EEQRSRAALT 351 AAMMYADRRD YAKVRQWLKK VSAPEYLFDK
GVLAAAAAVE LDGGRAALRQ 401 IGRVRKLPEQ QGRYFTADNL SKIQMLALSK
LPDKREALRG LDKIIEKPPA 451 GSNTELQAEA LVQRSVVYDR LGKRKKMISD
LERAFRLAPD NAQIMNNLGY 501 SLLTDSKRLD EGFALLQTAY QINPDDTAVN
DSIGWAYYLK GDAESALPYL 551 RYSFENDPEP EVAAHLGEVL WALGERDQAV
DVWTQAAHLT GDKKIWRETL 601 KRHGIALPQP SRKPRK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 951
shows 88.6% identity over a 616 aa overlap with a predicted ORF
(ORF 951) from N. gonorrhoeae
TABLE-US-03409 m951/g951 88.6% identity in 616 aa overlap 10 20 30
40 50 60 m951.pep
MIMLPNRFKMLTVLTATLIAGQVSAAGGGAGDMKQPKEVGKVERKQQRYSEEEIKNERAR |||||
|| :|:||:|:|:|||: || ||:|:: |||||||:||::||||||||||||| g951
MIMLPARFTILSVLAAALLAGQAYAA--GAADVELPKEVGKVLRKHRRYSEEEIKNERAR 10 20
30 40 50 70 80 90 100 110 120 m951.pep
LAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVAERALEMAVSLNAFE
|||||||||::||||||||||||||||||||||||||||||||||||||||||||||||| g951
LAAVGERVNRVETLLGGETALQKGQAGTALATYMLMLERTKSPEVAERALEMAVSLNAFE 60 70
80 90 100 110 130 140 150 160 170 180 m951.pep
QAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLL
|||||||||||||||||:|||||||||||||| ||||||||||||||:|: |:||:|||| g951
QAEMIYQKWRQIEPIPGEAQKRAGWLRNVLREGGNQHLDGLEEVLAQSDDVQKRRIFLLL 120
130 140 150 160 170 190 200 210 220 230 240 m951.pep
AQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDT
:|||||| |:|||||||||||||||||||||||||:||:|||||||||| |||||||||| g951
VQAAVQQGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDT 180
190 200 210 220 230 250 260 270 280 290 300 m951.pep
EILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNV
||||||||||||||||||||||||||||||||||||||||||||||||:: ||||||||| g951
EILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLNV 240
250 260 270 280 290 310 320 330 340 350 360 m951.pep
LLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD
|||:||||:||||||||||||||||||||||||||||||| |||:|||:||||:|||||| g951
LLEHNPNANLYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 300
310 320 330 340 350 370 380 390 400 410 420 m951.pep
YAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRAALRQIGRVRKLPEQQGRYFTADNL
||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||| g951
YAKVRQWLKKVSAPEYLFDKGVLAAAAAAELDGGRAALRQIGRVRKLPEQQGRYFTADNL 360
370 380 390 400 410 430 440 450 460 470 480 m951.pep
SKIQMLALSKLPDKREALRGLDKIIEKPPAGSNTELQAEALVQRSVVYDRLGKRKKMISD
|||||||||||||||||| ||::|| | |:::|| ||||:|||::|:::||| |||:| g951
SKIQMLALSKLPDKREALIGLNNIIAKLSAAGSTEPLAEALAQRSIIYEQFGKRGKMIAD 420
430 440 450 460 470 490 500 510 520 530 540 m951.pep
LERAFRLAPDNAQIMNNLGYSLLTDSKRLDEGFALLQTAYQINPDDTAVNDSIGWAYYLK ||
|::|:|||||||||||||||:|||||||||||||||||||||||||||||||||||| g951
LETALKLTPDNAQIMNNLGYSLLSDSKRLDEGFALLQTAYQINPDDTAVNDSIGWAYYLK 480
490 500 510 520 530 550 560 570 580 590 600 m951.pep
GDAESALPYLRYSFENDPEPEVAAHLGEVLWALGERDQAVDVWTQAAHLTGDKKIWRETL
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| g951
GDAESALPYLRYSFENDPEPEVAAHLGEVLWALGERDQAVDVWTQAAHLRGDKKIWRETL 540
550 560 570 580 590 610 m951.pep KRHGIALPQPSRKPRK ||:|||||:|||||||
g951 KRYGIALPEPSRKPRKX 600 610
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2907>:
TABLE-US-03410 a951.seq 1 ATGTTACCCG CCCGTTTCAC CATTTTATCT
GTGCTCGCGG CAGCCCTGCT 51 TGCCGGGCAG GCGTATGCCG CCGGCGCGGC
GGATGCGAAG CCGCCGAAGG 101 AAGTCGGAAA GGTTTTCAGA AAGCAGCAGC
GTTACAGCGA GGAAGAAATC 151 AAAAACGAAC GCGCACGGCT TGCGGCAGTG
GGCGAGCGGG TTAATCAGAT 201 ATTTACGTTG CTGGGAGGGG AAACCGCCTT
GCAAAAGGGG CAGGCGGGAA 251 CGGCTCTGGC AACCTATATG CTGATGTTGG
AACGCACAAA ATCCCCCGAA 301 GTCGCCGAAC GCGCCTTGGA AATGGCCGTG
TCGCTGAACG CGTTTGAACA 351 GGCGGAAATG ATTTATCAGA AATGGCGGCA
GATTGAGCCT ATACCGGGTA 401 AGGCGCAAAA ACGGGCGGGG TGGCTGCGGA
ACGTGCTGAG GGAAAGAGGA 451 AATCAGCATC TAGACGGACT GGAAGAAGTG
CTGGCTCAGG CGGACGAAGG 501 ACAGAACCGC AGGGTGTTTT TATTGTTGGC
ACAAGCCGCC GTGCAACAGG 551 ACGGGTTGGC GCAAAAAGCA TCGAAAGCGG
TTCGCCGCGC GGCGTTGAGA 601 TATGAACATC TGCCCGAAGC GGCGGTTGCC
GATGTGGTGT TCAGCGTACA 651 GGGACGCGAA AAGGAAAAGG CAATCGGAGC
TTTGCAGCGT TTGGCGAAGC 701 TCGATACGGA AATATTGCCC CCCACTTTAA
TGACGTTGCG TCTGACTGCA 751 CGCAAATATC CCGAAATACT CGACGGCTTT
TTCGAGCAGA CAGACACCCA 801 AAACCTTTCG GCCGTCTGGC AGGAAATGGA
AATTATGAAT CTGGTTTCCC 851 TGCACAGGCT GGATGATGCC TATGCGCGTT
TGAACGTGCT GTTGGAACGC 901 AATCCGAATG CAGACCTGTA TATTCAGGCA
GCGATATTGG CGGCAAACCG 951 AAAAGAAGGT GCTTCCGTTA TCGACGGCTA
CGCCGAAAAG GCATACGGCA 1001 GGGGGACGGG GGAACAGCGG GGCAGGGCGG
CAATGACGGC GGCGATGATA 1051 TATGCCGACC GAAGGGATTA CACCAAAGTC
AGGCAGTGGT TGAAAAAAGT 1101 GTCCGCGCCG GAATACCTGT TCGACAAAGG
TGTGCTGGCG GCTGCGGCGG 1151 CTGTCGAGTT GGACGGCGGC AGGGCGGCTT
TGCGGCAGAT CGGCAGGGTG 1201 CGGAAACTTC CCGAACAGCA GGGGCGGTAT
TTTACGGCAG ACAATTTGTC 1251 CAAAATACAG ATGTTCGCCC TGTCGAAGCT
GCCCGACAAA CGGGAGGCTT 1301 TGAGGGGGTT GGACAAGATT ATCGAAAAAC
CGCCTGCCGG CAGTAATACA 1351 GAGTTACAGG CAGAGGCATT GGTACAGCGG
TCAGTTGTTT ACGATCGGCT 1401 TGGCAAGCGG AAAAAAATGA TTTCAGATCT
TGAAAGGGCG TTCAGGCTTG 1451 CACCCGATAA CGCTCAGATT ATGAATAATC
TGGGCTACAG CCTGCTTTCC 1501 GATTCCAAAC GTTTGGACGA AGGCTTCGCC
CTGCTTCAGA CGGCATACCA 1551 AATCAACCCG GACGATACCG CTGTCAACGA
CAGCATAGGC TGGGCGTATT 1601 ACCTGAAAGG CGACGCGGAA AGCGCGCTGC
CGTATCTGCG GTATTCGTTT 1651 GAAAACGACC CCGAGCCCGA AGTTGCCGCC
CATTTGGGCG AAGTGTTGTG 1701 GGCATTGGGC GAACGCGATC AGGCGGTTGA
CGTATGGACG CAGGCGGCAC 1751 ACCTTACGGG AGACAAGAAA ATATGGCGGG
AAACGCTCAA ACGTCACGGC 1801 ATCGCATTGC CCCAACCTTC CCGAAAACCT
CGGAAATAA
This corresponds to the amino acid sequence <SEQ ID 2908; ORF
951.a>:
TABLE-US-03411 a951.pep 1 MLPARFTILS VLAAALLAGQ AYAAGAADAK
PPKEVGKVFR KQQRYSEEEI 51 KNERARLAAV GERVNQIFTL LGGETALQKG
QAGTALATYM LMLERTKSPE 101 VAERALEMAV SLNAFEQAEM IYQKWRQIEP
IPGKAQKRAG WLRNVLRERG 151 NQHLDGLEEV LAQADEGQNR RVFLLLAQAA
VQQDGLAQKA SKAVRRAALR 201 YEHLPEAAVA DVVFSVQGRE KEKAIGALQR
LAKLDTEILP PTLMTLRLTA 251 RKYPEILDGF FEQTDTQNLS AVWQEMEIMN
LVSLHRLDDA YARLNVLLER 301 NPNADLYIQA AILAANRKEG ASVIDGYAEK
AYGRGTGEQR GRAAMTAAMI 351 YADRRDYTKV RQWLKKVSAP EYLFDKGVLA
AAAAVELDGG RAALRQIGRV 401 RKLPEQQGRY FTADNLSKIQ MFALSKLPDK
REALRGLDKI IEKPPAGSNT 451 ELQAEALVQR SVVYDRLGKR KKMISDLERA
FRLAPDNAQI MNNLGYSLLS 501 DSKRLDEGFA LLQTAYQINP DDTAVNDSIG
WAYYLKGDAE SALPYLRYSF 551 ENDPEPEVAA HLGEVLWALG ERDQAVDVWT
QAAHLTGDKK IWRETLKRHG 600 IALPQPSRKP RK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 951
shows 96.4% identity over a 614 aa overlap with a predicted ORF
(ORF 951) from N. meningitidis
TABLE-US-03412 a951/m951 96.4% identity in 614 aa overlap 10 20 30
40 50 a951.pep
MLPARFTILSVLAAALLAGQAYAAG--AADAKPPKEVGKVERKQQRYSEEEIKNERAR ||| ||
:|:||:|:|:|||: ||| |:| | ||||||||||||||||||||||||| m951
MIMLPNRFKMLTVLTATLIAGQVSAAGGGAGDMKQPKEVGKVERKQQRYSEEEIKNERAR 10 20
30 40 50 60 60 70 80 90 100 110 a951.pep
LAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVAERALEMAVSLNAFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
LAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVAERALEMAVSLNAFE 70 80
90 100 110 120 120 130 140 150 160 170 a951.pep
QAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
QAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLL 130
140 150 160 170 180 180 190 200 210 220 230 a951.pep
AQAAVQQDGLAQKASKAVRRAALRYEHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDT
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m951
AQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDT 190
200 210 220 230 240 240 250 260 270 280 290 a951.pep
EILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
EILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNV 250
260 270 280 290 300 300 310 320 330 340 350 a951.pep
LLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD
|||||||||||||||||||||||||||||||||||||||| |||:|||:||||:|||||| m951
LLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 310
320 330 340 350 360 360 370 380 390 400 410 a951.pep
YTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRAALRQIGRVRKLPEQQGRYFTADNL
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
YAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRAALRQIGRVRKLPEQQGRYFTADNL 370
380 390 400 410 420 420 430 440 450 460 470 a951.pep
SKIQMFALSKLPDKREALRGLDKIIEKPPAGSNTELQAEALVQRSVVYDRLGKRKKMISD
|||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
SKIQMLALSKLPDKREALRGLDKIIEKPPAGSNTELQAEALVQRSVVYDRLGKRKKMISD 430
440 450 460 470 480 480 490 500 510 520 530 a951.pep
LERAFRLAPDNAQIMNNLGYSLLSDSKRLDEGFALLQTAYQINPDDTAVNDSIGWAYYLK
|||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||| m951
LERAFRLAPDNAQIMNNLGYSLLTDSKRLDEGFALLQTAYQINPDDTAVNDSIGWAYYLK 490
500 510 520 530 540 540 550 560 570 580 590 a951.pep
GDAESALPYLRYSFENDPEPEVAAHLGEVLWALGERDQAVDVWTQAAHLTGDKKIWRELL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m951
GDAESALPYLRYSFENDPEPEVAAHLGEVLWALGERDQAVDVWTQAAHLTGDKKIWRELL 550
560 570 580 590 600 600 610 a951.pep KRHGIALPQPSRKPRK
|||||||||||||||| m951 KRHGIALPQPSRKPRK 610
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2909>:
TABLE-US-03413 g952.seq (partial) 1 ..TTGTCTTATC GTTTGAATGC
TGCACCGATG TTTAACGATA ATCCTGTTGT 51 TTACGGAAAA ATCAAATTGC
AGAGTTGGAA AGCGCGGCGG GATTTCAATA 101 TTGTAAAGCA GGATTTGGAT
TTTTCCTGCG GGGCGGCTTC GGTGGCGACG 151 CTTTTGAACA ATTTTTACGG
GCAAAAGCTG ACGGAAGAAG AAGTGTTGGA 201 AAAACTGGGT AAGGAACAGA
TGCGCGCGTC GTTTGAGGAT ATGCGGCGCA 251 TTATGCCCGA TTTGGGTTTT
GAGGCGAAAG GCTATGCCCT GTCTTTCGAA 301 CAGCTCGCGC AGTTGAAAAT
CCCCGTCATC GTGTATCTGA AATACCGCAA 351 AGACGACCAT TTTTCGGTAT
TGCGCGGAGT GGATGGCAAT ACGGTTTTGC 401 TTGCCGACCC GTCGCCGGGT
CATGTTTCGA TGAGCAGGGC GCAGTTTTTG 451 GAGGCTTGGC AAACCCGTGA
GGGAAATTTG GCAGGCAAAA TTTTGGCGGT 501 CGTGCCGAAA AAAGCGGAGG
CGATTTCAAA TAAATTGTTT TTCACACATC 551 ATCCCAAGCG GCAGACGGAG
TTTGCAGTCG GACAGGTAAA ATGGTGGCGT 601 GCTTATTGA
This corresponds to the amino acid sequence <SEQ ID 2910; ORF
952.ng>:
TABLE-US-03414 g952.pep (partial) 1 ..LSYRLNAAPM FNDNPVVYGK
IKLQSWKARR DFNIVKQDLD FSCGAASVAT 51 LLNNFYGQKL TEEEVLEKLG
KEQMRASFED MRRIMPDLGF EAKGYALSFE 101 QLAQLKIPVI VYLKYRKDDH
FSVLRGVDGN TVLLADPSPG HVSMSRAQFL 151 EAWQTREGNL AGKILAVVPK
KAEAISNKLF FTHHPKRQTE FAVGQVKWWR 201 AY*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2911>:
TABLE-US-03415 m952.seq 1 ATGATGAAGT TCAAATATGT TTTTCTGTTG
GCGTGTGTTG TCGTTTCTTT 51 ATCTTATCGT TTGAATGCTG CACCGATGTT
TAACGATAAT CCTGTTGTTT 101 ACGGAAAAAT CAAAGTGCAG AGTTGGAAAG
CGCGGCGGGA TTTCAATATT 151 GTAAAGCAGG ATTTGGATTT TTCCTGTGGG
GCGGCTTCGG TGGCGACGCT 201 TTTGAACAAT TTTTACGGGC AAACGCTGAC
GGAAGAAGAA GTGTTGAAAA 251 AGCTGGATAA GGAGCAGATG CGCGCGTCGT
TTGAGGATAT GCGGCGCATT 301 ATGCCTGATT TGGGTTTTGA GGCGAAGGGC
TATGCCCTGT CTTTCGAGCA 351 GCTCGCGCAG TTGAAAATCC CCGTCATCGT
GTATCTGAAA TACCGCAAAG 401 ACGACCATTT TTCGGTATTG CGCGGTATAG
ACGGCAATAC GGTTTTGCTT 451 GCCGACCCGT CGCTGGGGCA TGTTTCAATG
AGCAGGGCGC AGTTTTTGGA 501 TGCTTGGCAA ACCCGTGAGG GAAATTTGGC
AGGTAAGATT TTGGCTGTCA 551 TACCGAAAAA AGCCGAGACA ATTTCAAATA
AATTGTTTTT CACACAACAC 601 CCAAAACGGC AGACGGAGTT TACAGTCGGA
CAAATCAGGC AAGCACGTGC 651 AGAGTAA
This corresponds to the amino acid sequence <SEQ ID 2912; ORF
952>:
TABLE-US-03416 m952.pep 1 MMKFKYVFLL ACVVVSLSYR LNAAPMFNDN
PVVYGKIKVQ SWKARRDFNI 51 VKQDLDFSCG AASVATLLNN FYGQTLTEEE
VLKKLDKEQM RASFEDMRRI 101 MPDLGFEAKG YALSFEQLAQ LKIPVIVYLK
YRKDDHFSVL RGIDGNTVLL 151 ADPSLGHVSM SRAQFLDAWQ TREGNLAGKI
LAVIPKKAET ISNKLFFTQH 201 PKRQTEFTVG QIRQARAE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 952
shows 92.5% identity over a 201 aa overlap with a predicted ORF
(ORF 952) from N. gonorrhoeae
TABLE-US-03417 g952/m952; 92.5% identity in 201 aa overlap 10 20 30
40 g952.pep LSYRLNAAPMFNDNPVVYGKIKLQSWKARRDFNIVKQDLDFSCG
||||||||||||||||||||||:||||||||||||||||||||| m952
MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKARRDFNIVKQDLDFSCG 10 20
30 40 50 60 50 60 70 80 90 100 g952.pep
AASVATLLNNFYGQKLTEEEVLEKLGKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQ
|||||||||||||| |||||||:|| ||||||||||||||||||||||||||||||||||| m952
AASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQ 70 80
90 100 110 120 110 120 130 140 150 160 g952.pep
LKIPVIVYLKYRKDDHFSVLRGVDGNTVLLADPSPGHVSMSRAQFLEAWQTREGNLAGKI
||||||||||||||||||||||:|||||||||||| |||||||||||:||||||||||||| m952
LKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKI 130
140 150 160 170 180 170 180 190 200 g952.pep
LAVVPKKAEAISNKLFFTHHPKRQTEFAVGQVKWWRAYX
|||:|||||:||||||||:||||||||:|||:: || m952
LAVIPKKAETISNKLFFTQHPKRQTEFTVGQIRQARAE 190 200 210
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2913>:
TABLE-US-03418 a952.seq 1 ATGATGAAGT TCAAATATGT TTTTCTGTTG
GCGTGTGTTG TCGTTTCTTT 51 ATCTTATCGT TTGAATGCTG CACCGATGTT
TAACGATAAT CCTGTTGTTT 101 ACGGAAAAAT CAAAGTGCAG AGTTGGAAAG
AAAGGCGGGA TTTCAATATT 151 GTAAAGCAGG ATTTGGATTT TTCCTGCGGG
GCGGCTTCGG TGGCGACGCT 201 TTTGAACAAT TTTTACGGGC AAACGCTGAC
GGAAGAAGAA GTGTTGAAAA 251 AGCTGGATAA GGAGCAGATG CGCGCGTCGT
TTGAGGATAT GCGGCGCATT 301 ATGCCAGATT TGGGTTTTGA AGCGAAAGGC
TATGCCCTGT CTTTCGAGCA 351 GCTCGCACAG TTGAAAATCC CCGTCATCGT
GTATCTGAAA TACCGCAAGG 401 ATGATCATTT CTCGGTATTG CGCGGGATAG
ACGGCAATAC GGTTTTGCTT 451 GCCGACCCGT CGCTGGGTCA TGTTTCAATG
AGCAGGGCGC AGTTTTNGGA 501 TGCTTGGCAA ACCCGTGAGG GAAATTTGGC
AGGTAAGATT TTGGCGGTCG 551 TGCCGAAAAA AGCCGAGACA ATTTCAAATA
AATTGTTTTT CACACATCAT 601 CCCAAGCGGC AGACGGAGTT TGCAGTCGGA
CAAATCAGGC AAGCACGTGC 651 AGAGTAA
This corresponds to the amino acid sequence <SEQ ID 2914; ORF
952.a>:
TABLE-US-03419 a952.pep 1 MMKFKYVFLL ACVVVSLSYR LNAAPMFNDN
PVVYGKIKVQ SWKERRDFNI 51 VKQDLDFSCG AASVATLLNN FYGQTLTEEE
VLKKLDKEQM RASFEDMRRI 101 MPDLGFEAKG YALSFEQLAQ LKIPVIVYLK
YRKDDHFSVL RGIDGNTVLL 151 ADPSLGHVSM SRAQFXDAWQ TREGNLAGKI
LAVVPKKAET ISNKLFFTHH 201 PKRQTEFAVG QIRQARAE*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 952
shows 97.7% identity over a 218 aa overlap with a predicted ORF
(ORF 952) from N. meningitidis
TABLE-US-03420 a952/m952 97.7% identity in 218 aa overlap 10 20 30
40 50 60 a952.pep
MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKERRDFNIVKQDLDFSCG
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| m952
MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKARRDFNIVKQDLDFSCG 10 20
30 40 50 60 70 80 90 100 110 120 a952.pep
AASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m952
AASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQ 70 80
90 100 110 120 130 140 150 160 170 180 a952.pep
LKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFXDAWQTREGNLAGKI
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| m952
LKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKI 130
140 150 160 170 180 190 200 210 219 a952.pep
LAVVPKKAETISNKLFFTHHPKRQTEFAVGQIRQARAEX
|||:||||||||||||||:||||||||:|||||||||| m952
LAVIPKKAETISNKLFFTQHPKRQTEFTVGQIRQARAE 190 200 210
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2915>:
TABLE-US-03421 g953.seq 1 ATGAAAAAAA TCATCTTCGC CGCGCTCGCA
GCGGCAGCCG TCGGCACTGC 51 CTCCGCCACC TACAAAGTGG ACGAATATCA
CGCCAACGTC CGTTTCGCCA 101 TCGACCACTT CAACACCAGC ACCAACGTCG
GCGGTTTTTA CGGTCTGACC 151 GGTTCCGTCG AGTTCGATCA AGCAAAACGC
GACGGCAAAA TCGACATCAC 201 CATTCCCGTC GCCAACCTGC AAAGCGGTTC
GCAACCCTTC ACCGGCCACC 251 TGAAATCCGC CGACATCTTC GATGCCGCTC
AATATCCGGA CATCCGCTTC 301 GTTTCCACCA AATTCAACTT CAACGGCAAA
AAACTTGTTT CCGTTGACGG 351 CAACCTGACC ATGCGCGGCA AAACCGCCCC
CGTCAAACTC AAAGCCGAAA 401 AATTCAACTG CTACCAAAGC CCGATGGCGG
AAACCGAAGT TTGCGGCGGC 451 GACTTCAGCA CCACCATCGA CCGCACCAAA
TGGGGCGTGG ACTACCTCGT 501 TAACGCCGGT ATGACCAAAA ACGTCCGCAT
CGACATCCAA ATCGAAGCTG 551 CAAAACAATA A
This corresponds to the amino acid sequence <SEQ ID 2916; ORF
953.ng>:
TABLE-US-03422 g953.pep 1 MKKIIFAALA AAAVGTASAT YKVDEYHANV
RFAIDHFNTS TNVGGFYGLT 51 GSVEFDQAKR DGKIDITIPV ANLQSGSQPF
TGHLKSADIF DAAQYPDIRF 101 VSTKFNFNGK KLVSVDGNLT MRGKTAPVKL
KAEKFNCYQS PMAETEVCGG 151 DFSTTIDRTK WGVDYLVNAG MTKNVRIDIQ
IEAAKQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2917>:
TABLE-US-03423 m953.seq 1 ATGAAAAAAA TCATCTTCGC CGCACTCGCA
GCCGCCGCCA TCAGTACTGC 51 CTCCGCCGCC ACCTACAAAG TGGACGAATA
TCACGCCAAC GCCCGTTTCG 101 CCATCGACCA TTTCAACACC AGCACCAACG
TCGGCGGTTT TTACGGTCTG 151 ACCGGTTCCG TCGAGTTCGA CCAAGCAAAA
CGCGACGGTA AAATCGACAT 201 CACCATCCCC ATTGCCAACC TGCAAAGCGG
TTCGCAACAC TTTACCGACC 251 ACCTGAAATC AGCCGACATC TTCGATGCCG
CCCAATATCC GGACATCCGC 301 TTTGTTTCCA CCAAATTCAA CTTCAACGGC
AAAAAACTGG TTTCCGTTGA 351 CGGCAACCTG ACCATGCACG GCAAAACCGC
CCCCGTCAAA CTCAAAGCCG 401 AAAAATTCAA CTGCTACCAA AGCCCGATGG
AGAAAACCGA AGTTTGTGGC 451 GGCGACTTCA GCACCACCAT CGACCGCACC
AAATGGGGCA TGGACTACCT 501 CGTTAACGTT GGTATGACCA AAAGCGTCCG
CATCGACATC CAAATCGAGG 551 CAGCCAAACA ATAA
This corresponds to the amino acid sequence <SEQ ID 2918; ORF
953>:
TABLE-US-03424 m953.pep 1 MKKIIFAALA AAAISTASAA TYKVDEYHAN
ARFAIDHFNT STNVGGFYGL 51 TGSVEFDQAK RDGKIDITIP IANLQSGSQH
FTDHLKSADI FDAAQYPDIR 101 FVSTKFNFNG KKLVSVDGNL TMHGKTAPVK
LKAEKFNCYQ SPMEKTEVCG 151 GDFSTTIDRT KWGMDYLVNV GMTKSVRIDI
QIEAAKQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 953
shows 93.0% identity over a 187 aa overlap with a predicted ORF
(ORF 953) from N. gonorrhoeae
TABLE-US-03425 m953/g953 93.0% identity in 187 aa overlap 10 20 30
40 50 60 m953.pep
MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNVGGFYGLTGSVEFDQAK
|||||||||||||::|||| ||||||||||:||||||||||||||||||||||||||||| g953
MKKIIFAALAAAAVGTASA-TYKVDEYHANVRFAIDHFNTSTNVGGFYGLTGSVEFDQAK 10 20
30 40 50 70 80 90 100 110 120 m953.pep
RDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNL
||||||||||:|||||||| || ||||||||||||||||||||||||||||||||||||| g953
RDGKIDITIPVANLQSGSQPFTGHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNL 60 70
80 90 100 110 130 140 150 160 170 180 m953.pep
TMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRTKWGMDYLVNVGMTKSVRIDI
||:|||||||||||||||||||| :||||||||||||||||||:|||||:||||:||||| g953
TMRGKTAPVKLKAEKFNCYQSPMAETEVCGGDFSTTIDRTKWGVDYLVNAGMTKNVRIDI 120
130 140 150 160 170 m953.pep QIEAAKQX |||||||| g953 QIEAAKQX
180
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2919>:
TABLE-US-03426 a953.seq 1 ATGAAAAAAA TCATCATCGC CGCGCTCGCA
GCAGCCGCCA TCGGCACTGC 51 CTCCGCCGCC ACCTACAAAG TGGACGAATA
TCACGCCAAC GCCCGTTTCT 101 CTATCGACCA TTTCAACACC AGCACCAACG
TCGGCGGTTT TTACGGTCTG 151 ACCGGTTCCG TTGAGTTCGA CCAAGCAAAA
CGCGACGGTA AAATCGACAT 201 CACCATCCCC GTTGCCAACC TGCAAAGCGG
TTCGCAACAC TTTACCGACC 251 ACCTGAAATC AGCCGACATC TTCGATGCCG
CCCAATATCC GGACATCCGC 301 TTTGTTTCCA CCAAATTCAA CTTCAACGGC
AAAAAACTGG TTTCCGTTGA 351 CGGCAACCTG ACCATGCACG GCAAAACCGC
CCCCGTCAAA CTCAAAGCCG 401 AAAAATTCAA CTGCTACCAA AGCCCGATGT
TGAAAACCGA AGTTTGCGGC 451 GGCGACTTCA GCACCACCAT CGACCGCACC
AAATGGGGCA TGGACTACCT 501 CGTTAACGTT GGTATGACCA AAAGCGTCCG
CATCGACATC CAAATCGAGG 551 CAGCCAAACA ATAA
This corresponds to the amino acid sequence <SEQ ID 2920; ORF
953.a>:
TABLE-US-03427 a953.pep 1 MKKIIIAALA AAAIGTASAA TYKVDEYHAN
ARFSIDHFNT STNVGGFYGL 51 TGSVEFDQAK RDGKIDITIP VANLQSGSQH
FTDHLKSADI FDAAQYPDIR 101 FVSTKFNFNG KKLVSVDGNL TMHGKTAPVK
LKAEKFNCYQ SPMLKTEVCG 151 GDFSTTIDRT KWGMDYLVNV GMTKSVRIDI
QIEAAKQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 953
shows 97.3% identity over a 187 aa overlap with a predicted ORF
(ORF 953) from N. meningitidis
TABLE-US-03428 a953/m953 97.3% identity in 187 aa overlap 10 20 30
40 50 60 a953.pep
MKKIIIAALAAAAIGTASAATYKVDEYHANARFSIDHFNTSTNVGGFYGLTGSVEFDQAK
|||||:||||||||:||||||||||||||||||:|||||||||||||||||||||||||| m953
MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNVGGFYGLTGSVEFDQAK 10 20
30 40 50 60 70 80 90 100 110 120 a953.pep
RDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNL
||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||| m953
RDGKIDITIPIANLQSGSQHFTDHLKSADI FDAAQYPDIRFVSTKFNFNGKKLVSVDGNL 70 80
90 100 110 120 130 140 150 160 170 180 a953.pep
TMHGKTAPVKLKAEKFNCYQSPMLKTEVCGGDFSTTIDRTKWGMDYLVNVGMTKSVRIDI
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| m953
TMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRTKWGMDYLVNVGMTKSVRIDI 130
140 150 160 170 180 a953.pep QIEAAKQX |||||||| m953 QIEAAKQX
[0445] g954.seq not found yet
[0446] g954.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2921>:
TABLE-US-03429 m954.seq 1 ATGAAAAAGT TTTATTTTGT GCTGCTGGCG
TTGGGTTTGG CAGCGTGTGG 51 GCAAGAACAA TCGCAGAAAG CTGATGCGGA
GCAGTATTTT TTTGCCAATA 101 AATATCAATT TGCAGATGAG AAACAGGCTT
TTTATTTTGA ACGCGCCGCC 151 CGTTTCCGTG TATTGCAACA AGGCCTTGGC
GGGGATTTTG AGAGGTTTTT 201 AAAAGGAGAA ATACCTAATC AAGAAAATCT
TGCAAAGTAT CGTGAAAATA 251 TTACTCAAGC AGTCGCTTAT TATGCGGACA
CGAATGGAGA TGATGACCCA 301 TACCGCGTCT GCAAACAGGC TGCGCAAGAT
GCAGAAATCC TGATGAAGAG 351 TATGGTAACA AGCGGTGGAG GCGGTACAAC
TGATTTAGAT AAGGAAAGTT 401 ATCAAAATTA CCGAAAATCA ATGCAAGAAT
GCCGTAAAAC AATAACGGAA 451 GCTGAAGCCA ATTTGCCGAA AAAATAA
This corresponds to the amino acid sequence <SEQ ID 2922; ORF
954>:
TABLE-US-03430 m954.pep 1 MKKFYFVLLA LGLAACGQEQ SQKADAEQYF
FANKYQFADE KQAFYFERAA 51 RFRVLQQGLG GDFERFLKGE IPNQENLAKY
RENITQAVAY YADTNGDDDP 101 YRVCKQAAQD AEILMKSMVT SGGGGTTDLD
KESYQNYRKS MQECRKTITE 151 AEANLPKK*
[0447] a954.seq not found yet
[0448] a954.pep not found yet
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2923>:
TABLE-US-03431 g957.seq (partial) 1 ATGTTTAAAA AATTCAAACC
GGTACTGTTG TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACAG
GTATTGCCTA TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT
GAAGTACCTG AAAATCCGAA TGCTTTTGTG 151 GCGAAACTTG CCCGCCTGTT
CCGAAATGCC GACAGGGCGG TTGTCATCGT 201 GAAGGAATCG ATGAGGACGG
AGGAAAGCCT TGCCGGAGCT GTGGATGACG 251 GTCCGTTGCA GTCGGAGAAG
GATTATCTCG CGCTCGCTAT CCGGCTCAGT 301 CGTTTGAAAG AAAAGGCGAA
ATGGTTTCAC GTAACGGAGC AGGAACATGG 351 GGAAGAGGTT TGGCTGGATT
ACTATATCGG CGAGGGCGGT TTGGTTGCGG 401 TTTCGCTTTC GCAACGCTCG
CCGGAAGCGT TTGTTAATGC CGAATATCTG 451 TATCGGAACG ATCGTCCGTT
TTCTGTAAAT GTGTACGGCG GAACGGCTCA 501 CGGGGAAAAT TATGAAACGA
CAGGAGAATA TCGGGTTGTT TGGCAACCGG 551 ACGGTTCGGT ATTTGATGCG
GCGGGGCGCG GGAAAATCGG GGAAGATGTT 601 TATGAGCATT GCCTCGGGTG
TTATCAGATG GCCCAGGTAT ATTTGGCGAA 651 ATACCGGGAT GTCGCGAATG
ACGAGCAGAA GGTTTGGGAC TTCCGCGAAG 701 AGAGCAACCG GATTGCATCG
GACTCGCGCG ATTATGTGTT TTATCAGAAT 751 ATGCGGGAAT TGATGCCCCG
GGGGatgaaG gcgaacagtc ttgtggtcgg 801 ctatgatgcg gacggtCtgc
CgcaAAAagt ctattggagt gtcgacaatg 851 gaaaaaaacc ccaaagtgtc
gaatattatt tgaaaaacgg aaatcttttt 901 attgcccaat cttcgacggt
aaccttgaaa acggatggcg taacggcgga 951 tatgcaaacc tatcatgcgc
aacaaacgtt gtatttggat ggg...
This corresponds to the amino acid sequence <SEQ ID 2924; ORF
957.ng>:
TABLE-US-03432 g957.pep (partial) 1 MFKKFKPVLL SFFALVFAFW
LGTGIAYEIN PRWFLSDTAT EVPENPNAFV 51 AKLARLFRNA DRAVVIVKES
MRTEESLAGA VDDGPLQSEK DYLALAIRLS 101 RLKEKAKWFH VTEQEHGEEV
WLDYYIGEGG LVAVSLSQRS PEAFVNAEYL 151 YRNDRPFSVN VYGGTAHGEN
YETTGEYRVV WQPDGSVFDA AGRGKIGEDV 201 YEHCLGCYQM AQVYLAKYRD
VANDEQKVWD FREESNRIAS DSRDYVFYQN 251 MRELMPRGMK ANSLVVGYDA
DGLPQKVYWS VDNGKKPQSV EYYLKNGNLF 301 IAQSSTVTLK TDGVTADMQT
YHAQQTLYLD G...
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2925>:
TABLE-US-03433 m957.seq 1 ATGTTTAAAA AATTCAAACC GGTACTGTTG
TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACGG GTATTGCCTA
TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT GAAGTACCTA
AAAATCCGAA TGCTTTTGTG 151 GCGAAACTTG CCCGCCTGTT CCGAAATGCC
GACAGGGCGG TTGTCATCGT 201 GAAGGAATCG ATAAGGACGG AGGAAAATCT
TGCCGGAACT GTGGATGACG 251 GTCCGTTGCA GTCGGAGAAG GATTATCTCG
CGCTCGCTAT CCGGCTCAGT 301 CGTTTGAAAG AAAAGGCGAA ATGGTTTCAC
GTAACGGAGC AGGAACATGG 351 GAAAGAGGTT TGGCTGGATT ACCATATCGG
CGAGGGCGGT TTGGTTGCGG 401 TTTCGCTTTC GCAACGCTCG CCGGAAGCAT
TTGTTAATGC CGAATATCTG 451 TATCGGAACG ATCGTCCGTT TTCTGTAAAT
GTGTACGGCG GAACGGTTCA 501 CGGGGAAAAT TATGAAACGA CAGGAGAATA
TCGGGTTGTT TGGCAACCAG 551 ACGGTTCGGT ATTTGATGCG GCGGGGCGCG
GGAAAATCGG GGAAGATGTT 601 TATGAGCATT GCCTCGGGTG TTATCAGATG
GCCCAGGTAT ATTTGGCGAA 651 ATACCGGGAT GTCGCGAATG ACGAGCAGAA
GGTTTGGGAC TTCCGCAAAG 701 AGAGCAACCG AATTGCGTCG GACTCGCGCA
ATTCTGTGTT TTATCAGAAT 751 ATGCGGGAAT TGATGCCCCG AGGGATGAAG
GCGAACAGTC TTGTGGTCGG 801 CTATGATGCG GACGGTCTGC CGCAAAAAGT
CTATTGGAGT TTCGACAATG 851 GAAAAAAACG CCAGAGTTTC GAATATTATT
TGAAAAACGG AAATCTTTTT 901 ATTGCACAAT CTTCGACGGT AGCATTGAAA
GCGGATGGCG TAACGGCGGA 951 TATGCAGACC TATCATGCGC AACAGACGTG
GTATTTGGAT GGCGGGCGGA 1001 TTGTCCGCGA AGAGAAACAG GGAGACAGAC
TGCCTGATTT TCCTTTGAAC 1051 TTGGAAAATT TGGAAAAAGA GGTGCGCCGT
TATGCAGAGG CTGCGGCGAG 1101 ACGTTCGGGC GGCAGGCGCG ACCTTTCTCA
CTGA
This corresponds to the amino acid sequence <SEQ ID 2926; ORF
957>:
TABLE-US-03434 m957.pep 1 MFKKFKPVLL SFFALVFAFW LGTGIAYEIN
PRWFLSDTAT EVPKNPNAFV 51 AKLARLFRNA DRAVVIVKES IRTEENLAGT
VDDGPLQSEK DYLALAIRLS 101 RLKEKAKWFH VTEQEHGKEV WLDYHIGEGG
LVAVSLSQRS PEAFVNAEYL 151 YRNDRPFSVN VYGGTVHGEN YETTGEYRVV
WQPDGSVFDA AGRGKIGEDV 201 YEHCLGCYQM AQVYLAKYRD VANDEQKVWD
FRKESNRIAS DSRNSVFYQN 251 MRELMPRGMK ANSLVVGYDA DGLPQKVYWS
FDNGKKRQSF EYYLKNGNLF 301 IAQSSTVALK ADGVTADMQT YHAQQTWYLD
GGRIVREEKQ GDRLPDFPLN 351 LENLEKEVRR YAEAAARRSG GRRDLSH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 957
shows 95.2% identity over a 331 aa overlap with a predicted ORF
(ORF 957) from N. gonorrhoeae
TABLE-US-03435 g957/m957 95.2% identity in 331 aa overlap 10 20 30
40 50 60 g957.pep
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPENPNAFVAKLARLFRNA
|||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||| m957
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPKNPNAFVAKLARLFRNA 10 20
30 40 50 60 70 80 90 100 110 120 g957.pep
DRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGEEV
||||||||||:||||:|||:|||||||||||||||||||||||||||||||||||||:|| m957
DRAVVIVKESIRTEENLAGTVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGKEV 70 80
90 100 110 120 130 140 150 160 170 180 g957.pep
WLDYYIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTAHGENYETTGEYRVV
||||:||||||||||||||||||||||||||||||||||||||||:|||||||||||||| m957
WLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV 130
140 150 160 170 180 190 200 210 220 230 240 g957.pep
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFREESNRIAS
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||| m957
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFRKESNRIAS 190
200 210 220 230 240 250 260 270 280 290 300 g957.pep
DSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSVDNGKKPQSVEYYLKNGNLF |||:
||||||||||||||||||||||||||||||||||| ||||| || |||||||||| m957
DSRNSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF 250
260 270 280 290 300 310 320 330 g957.pep
IAQSSTVTLKTDGVTADMQTYHAQQTLYLDG |||||||:||:||||||||||||||| ||||
m957 IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLENLEKEVRR
310 320 330 340 350 360 m957 YAEAAARRSGGRRDLSHX 370
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2927>:
TABLE-US-03436 a957.seq 1 ATGTTTAAAA AATTCAAACC GGTACTGTTG
TCATTTTTTG CACTTGTATT 51 TGCCTTTTGG CTGGGAACGG GTATTGCCTA
TGAGATTAAT CCGCGTTGGT 101 TTTTGAGCGA TACGGCAACT GAAAATCCGA
ATGCTTTTGT GGCGAAACTT 151 GCCCGCCTGT TCCGAAATGC CGACAGGGCG
GTTGTCATCG TGAAGGAATC 201 GATGAGGACG GAGGAAAGTC TTGCCGGAGC
TGTGGATGAC GGTCCGTTGC 251 AGTCGGAGAA GGATTATCTT GCACTCGCTG
TCCGGCTCAG TCGTTTGAAA 301 GAAAAGGCGA AATGGTTTCA CGTAACGGAG
CAGGAACATG GGGAAGAGGT 351 TTGGCTGGAT TACTATATCG GCGAGGGCGG
TTTGGTTGCG GTTTCGCTTT 401 CGCAACGCTC GCCGGAAGCG TTTGTTAATG
CCGAATATCT GTATCGGAAC 451 GATCGTCCGT TTTCTGTAAA TGTGTACGGC
GGAACGGTTC ACGGGGAAAA 501 TTATGAAACG ACAGGAGAAT ATCGGGTTGT
TTGGCAACCG GACGGTTCGG 551 TATTTGATGC GTCGGGGCGC GGGAAAATCG
GGGAAGATGT TTATGAGCAT 601 TGCCTCGGGT GTTATCAGAT GGCCCAGGTA
TATTTGGCGA AATATCGGGA 651 TGTCGCGAAT GATGAGCAGA AGGTTTGGGA
CTTCCGCGAA GAGAGTAACC 701 GGATTGCGTC GGACTCGCGC GATTCTGTGT
TTTATCAGAA TATGCGGGAA 751 TTGATGCCCC GAGGGATGAA GGCAAACAGT
CTTGTGGTCG GCTATGATGC 801 GGACGGTCTG CCGCAGAAAG TCTATTGGAG
TTTCGACAAT GGGAAAAAAC 851 GCCAGAGTTT CGAATATTAT TTGAAAAACG
GAAATCTTTT TATTGCACAA 901 TCTTCGACGG TAGCATTGAA AGCGGATGGC
GTAACGGCGG ATATGCAGAC 951 CTATCATGCG CAACAGACGT GGTATTTAGA
TGGCGGGCGG ATTGTCCGCG 1001 AAGAGAAACA GGGGGACAGA CTGCCTGATT
TTCCTTTGAA CTTGGAAGAT 1051 TTGGAAAAAG AGGTGAGCCG TTATGCAGAG
GCTGCGGCGA GACGTTCGGG 1101 CGGCAGGCGC GACCTTTCTC ACTGA
This corresponds to the amino acid sequence <SEQ ID 2928; ORF
957.a>:
TABLE-US-03437 a957.pep 1 MFKKFKPVLL SFFALVFAFW LGTGIAYEIN
PRWFLSDTAT ENPNAFVAKL 51 ARLFRNADRA VVIVKESMRT EESLAGAVDD
GPLQSEKDYL ALAVRLSRLK 101 EKAKWFHVTE QEHGEEVWLD YYIGEGGLVA
VSLSQRSPEA FVNAEYLYRN 151 DRPFSVNVYG GTVHGENYET TGEYRVVWQP
DGSVFDASGR GKIGEDVYEH 201 CLGCYQMAQV YLAKYRDVAN DEQKVWDFRE
ESNRIASDSR DSVFYQNMRE 251 LMPRGMKANS LVVGYDADGL PQKVYWSFDN
GKKRQSFEYY LKNGNLFIAQ 301 SSTVALKADG VTADMQTYHA QQTWYLDGGR
IVREEKQGDR LPDFPLNLED 351 LEKEVSRYAE AAARRSGGRR DLSH*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 957
shows 96.3% identity over a 377 aa overlap with a predicted ORF
(ORF 957) from N. meningitidis
TABLE-US-03438 a957/m957 96.3% identity in 377 aa overlap 10 20 30
40 50 a957.pep
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATE---NPNAFVAKLARLFRNA
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| m957
MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPKNPNAFVAKLARLFRNA 10 20
30 40 50 60 60 70 80 90 100 110 a957.pep
DRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAVRLSRLKEKAKWFHVTEQEHGEEV
||||||||||:||||:|||:||||||||||||||||:||||||||||||||||||||:|| m957
DRAVVIVKESIRTEENLAGTVDDGPLQSEKDYLALAIRLSRLKEKAKWFHVTEQEHGKEV 70 80
90 100 110 120 120 130 140 150 160 170 a957.pep
WLDYYIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV
||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||| m957
WLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVNVYGGTVHGENYETTGEYRVV 130
140 150 160 170 180 180 190 200 210 220 230 a957.pep
WQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFREESNRIAS
||||||||||:|||||||||||||||||||||||||||||||||||||||||:||||||| m957
WQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKYRDVANDEQKVWDFRKESNRIAS 190
200 210 220 230 240 240 250 260 270 280 290 a957.pep
DSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF
|||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||| m957
DSRNSVFYQNMRELMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNGNLF 250
260 270 280 290 300 300 310 320 330 340 350 a957.pep
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLEDLEKEVSR
||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| | m957
IAQSSTVALKADGVTADMQTYHAQQTWYLDGGRIVREEKQGDRLPDFPLNLENLEKEVRR 310
320 330 340 350 360 360 370 a957.pep YAEAAARRSGGRRDLSHX
|||||||||||||||||| m957 YAEAAARRSGGRRDLSHX 370
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2929>:
TABLE-US-03439 g958.seq 1 TTGGCTCGTT TATTTTCACT CAAACCACTG
GTGCTGGCAT TGGGCTTCTG 51 TTTCGGCACG CATTGCGCCG CCGATACCGT
TGCGGCGGAA GAGGCGGACG 101 GGCGTGTCGC AGAAGGCGGT GCGCAGGGCG
CGTCCGAATC CGCACAAGCT 151 TCCGATTTGA CCCTCGGTTC GACCTGCCTG
TTTTGCAGTA ACGAAAGCGG 201 CAGCCCCGAG AGAACCGAAG CCGCCGTCCA
AGGCAGCGGC GAAGCATCCG 251 TCCCCGAAGA CTATACGCGC ATTGTTGCCG
ACAGGATGGA AGGACAGTCG 301 AAGGTTAAGG TGCGCGCGGA AGGAAGCGTT
ATCATCGAAC GGGACGGCGC 351 AGTCCTCAAT ACCGATTGGG CGGATTACGA
CCAGTCGGGC GACACCGTTA 401 CCGTAGGCGA CCGGTTCGCC CTCCAACAGG
ACGGTACGCT GATTCGGGGC 451 GAAACCCTGA CCTACAATCT CGATCAGCAG
ACCGGCGAAG CGCACAACGT 501 CCGTATGGAA ACCGAACAAG GCGGACGGCG
GCTGCAAAGC GTCAGCCGCA 551 CCGCCGAAAT GTTGGGCGAA GGGCGTTACA
AACTGACGGA AACCCAATTC 601 AACACCTGTT CCGCCGGAGA TGCCGGCTGG
TATGTCAAGG CCGCCTCTGT 651 CGAAGCCGAT CGGGGAAAAG GCATAGGCGT
TGCCAAACAC GCCGCCTTCG 701 TGTTCGGCGG CGTTCCCCTT TTCTATACGC
CTTGGGCGGA CTTCCCGCTT 751 GACGGCAACC GCAAAAGCGG ACTGCTCGTC
CCGTCCGTAT CTGCCGGTTC 801 GGACGGCGTT TCCCTTTCCG TCCCCTATTA
TTTCAACCTT GCCCCCAACT 851 TCGATGCCAC TTTCGCCCCC GGCATTATCG
GCGAACGCGG CGCGACGTTT 901 GACGGACAAA TCCGTTACCT GCGTCCCGAT
TACAGCGGAC AGACCGACCT 951 GACCTGGTTG CCGCACGATA AGAAAAGCGG
CAGGAACAAC CGCTATCAGG 1001 CAAAATGGCA GCACCGGCAC GACATTTCCG
ACACGCTTCA GGCGGGTGTC 1051 GATTTCAACC AAGTCTCCGA CAGCGGCTAC
TACCGCGACT TTTACGGCGG 1101 CGAAGAAATC GCCGGCAACG TCAACCTCAA
CCGCCGCGTA TGGCTGGATT 1151 ATGGCGGCAG GGCGGCGGGA GGCAGCCTGA
ATGCCGGCCT TTCGGTTCAG 1201 AAATACCAGA CGCTGGCAAA CCAAAGCGGC
TACAAAGACG AACCTTACGC 1251 CATCATGCCC CGCCTTTCTG CCGATTGGCA
TAAAAACGCA GGCAGGGCGC 1301 AAATCGGCGT GTCCGCACAA TTTACCCGCT
TCAGCCACGA CGGCCGCCAA 1351 GACGGCAGCC GACTGGTCGT GTATCCCGGT
ATCAAATGGG ATTTCAGCAA 1401 CAGCTGGGGC TACGTCCGCC CCAAACTCGG
GCTGCACGCC ACTTATTACA 1451 GCCTCGACAG TTTCGGCGGC AAAGCATCCC
GCAGCGTCGG GCGCGTTTTG 1501 CCCGTTGTCA ATATCGACGG CGGCACAACC
TTCGAACGCA ATACGCGCCT 1551 GTTCGGCGGC GGAGTCGTGC AAACCATCGA
GCCGCGCCTG TTCTACAACT 1601 ATATTCCTGC CAAATCTCAA AACGACCTGC
CCAATTTCGA TTCGTCGGAA 1651 AGCAGCTTCG GCTACGGGCA GCTTTTCCGC
GAAAACCTCT ATTACGGCAA 1701 CGACCGCATC AACGCCGCCA ACAGCCTTTC
CACCGCCGTG CAGAGCCGTA 1751 TTTTGGACGG CGCGACGGGG GAGGAGCGTT
TCCGCGCCGG TATCGGTCAG 1801 AAATTCTATT TCAAGGATGA TGCGGTGATG
CTTGACGGCA GCGTCGGCAA 1851 AAATCCGCGC AGCCGTTCCG ACTGGGTGGC
ATTCGCCTCC GGCGGCATAG 1901 GCGGGCGTTT CACCCTCGAC AGCAGCATCC
ACTACAACCA AAACGACAAA 1951 CGCGCCGAAC ATTACGCCGT CGGCGCAGGC
TACCGCCCCG CCCCCGGAAA 2001 AGTGTTGAAC GCCCGCTACA AATACGGGCG
CAACGAAAAA ATCTACCTGC 2051 AGGCGGACGG TTCCTATTTT TACGACAAAC
TCAGCCAGCT CGACCTGTCC 2101 GCACAATGGC CGCTGACGCG CAACCTGTCT
GCCGTCGTCC GCTACAACTA 2151 CGGTTTTGAA GCCAAAAAAC CGATAGAAAT
GCTTGCCGGT GCAGAATACA 2201 AAAGCAGTTG CGGCTGCTGG GGCGCGGGCG
TGTACGCCCA ACGCTACGTT 2251 ACCGGCGAAA ACACCTACAA AAACGCCGTC
TTTTTTTCAC TTCAGTTGAA 2301 AGACCTCAGC AGCGTCGGCA GAAACCCCGC
AGGCAGGATG GATGTCGCCG 2351 TTCCCGGCTA CATCCCCGCC CACTCTCTTT
CCGCCGGACG CAACAAACGG 2401 CCCTGA
This corresponds to the amino acid sequence <SEQ ID 2930; ORF
958.ng>:
TABLE-US-03440 g958.pep 1 LARLFSLKPL VLALGFCFGT HCAADTVAAE
EADGRVAEGG AQGASESAQA 51 SDLTLGSTCL FCSNESGSPE RTEAAVQGSG
EASVPEDYTR IVADRMEGQS 101 KVKVRAEGSV IIERDGAVLN TDWADYDQSG
DTVTVGDRFA LQQDGTLIRG 151 ETLTYNLDQQ TGEAHNVRME TEQGGRRLQS
VSRTAEMLGE GRYKLTETQF 201 NTCSAGDAGW YVKAASVEAD RGKGIGVAKH
AAFVFGGVPL FYTPWADFPL 251 DGNRKSGLLV PSVSAGSDGV SLSVPYYFNL
APNFDATFAP GIIGERGATF 301 DGQIRYLRPD YSGQTDLTWL PHDKKSGRNN
RYQAKWQHRH DISDTLQAGV 351 DFNQVSDSGY YRDFYGGEEI AGNVNLNRRV
WLDYGGRAAG GSLNAGLSVQ 401 KYQTLANQSG YKDEPYAIMP RLSADWHKNA
GRAQIGVSAQ FTRFSHDGRQ 451 DGSRLVVYPG IKWDFSNSWG YVRPKLGLHA
TYYSLDSFGG KASRSVGRVL 501 PVVNIDGGTT FERNTRLFGG GVVQTIEPRL
FYNYIPAKSQ NDLPNFDSSE 551 SSFGYGQLFR ENLYYGNDRI NAANSLSTAV
QSRILDGATG EERFRAGIGQ 601 KFYFKDDAVM LDGSVGKNPR SRSDWVAFAS
GGIGGRFTLD SSIHYNQNDK 651 RAEHYAVGAG YRPAPGKVLN ARYKYGRNEK
IYLQADGSYF YDKLSQLDLS 701 AQWPLTRNLS AVVRYNYGFE AKKPIEMLAG
AEYKSSCGCW GAGVYAQRYV 751 TGENTYKNAV FFSLQLKDLS SVGRNPAGRM
DVAVPGYIPA HSLSAGRNKR 801 P*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2931>:
TABLE-US-03441 m958.seq 1 TTGGCTCGTT TATTTTCACT CAAACCACTG
GTGCTGGCAT TGGGCCTCTG 51 CTTCGGCACG CATTGCGCCG CCGCCGATGC
CGTTGCGGCG GAGGAAACGG 101 ACAATCCGAC CGCCGGAGAA AGCGTTCGGA
GCGTGTCCGA ACCCATACAG 151 CCTACCAGCC TGAGCCTCGG TTCGACCTGC
CTGTTTTGCA GTAACGAAAG 201 CGGCAGCCCC GAGAGAACCG AAGCCGCCGT
CCAAGGCAGC GGCGAAGCAT 251 CCATCCCCGA AGACTATACG CGCATTGTTG
CCGACAGGAT GGAAGGACAG 301 TCGCAGGTGC AGGTGCGTGC CGAAGGCAAC
GTCGTCGTCG AACGCAACCG 351 GACGACCCTC AATACCGATT GGGCGGATTA
CGACCAGTCG GGCGACACCG 401 TTACCGCAGG CGACCGGTTC GCCCTCCAAC
AGGACGGTAC GCTGATTCGG 451 GGCGAAACCC TGACCTACAA TCTCGAGCAG
CAGACCGGGG AAGCGCACAA 501 CGTCCGCATG GAAATCGAAC AAGGCGGACG
GCGGCTGCAA AGCGTCAGCC 551 GCACCGCCGA AATGTTGGGC GAAGGGCATT
ACAAACTGAC GGAAACCCAA 601 TTCAACACCT GTTCCGCCGG CGATGCCGGC
TGGTATGTCA AGGCAGCCTC 651 TGTCGAAGCC GATCGGGAAA AAGGCATAGG
CGTTGCCAAA CACGCCGCCT 701 TCGTGTTCGG CGGCGTTCCC ATTTTCTACA
CCCCTTGGGC GGACTTCCCG 751 CTTGACGGCA ACCGCAAAAG CGGCCTGCTT
GTTCCCTCAC TGTCCGCCGG 801 TTCGGACGGC GTTTCCCTTT CCGTTCCCTA
TTATTTCAAC CTTGCCCCCA 851 ATCTCGATGC CACGTTCGCG CCCAGCGTGA
TCGGCGAACG CGGCGCGGTC 901 TTTGACGGGC AGGTACGCTA CCTGCGGCCG
GATTATGCCG GCCAGTCCGA 951 CCTGACCTGG CTGCCGCACG ACAAGAAAAG
CGGCAGGAAT AACCGCTATC 1001 AGGCGAAATG GCAGCATCGG CACGACATTT
CCGACACGCT TCAGGCGGGT 1051 GTCGATTTCA ACCAAGTCTC CGACAGCGGC
TACTACCGCG ACTTTTACGG 1101 CAACAAAGAA ATCGCCGGCA ACGTCAACCT
CAACCGCCGT GTATGGCTGG 1151 ATTATGGCGG CAGGGCGGCG GGCGGCAGCC
TGAATGCCGG CCTTTCGGTT 1201 CTGAAATACC AGACGCTGGC AAACCAAAGC
GGCTACAAAG ACAAACCGTA 1251 TGCCCTCATG CCGCGCCTTT CGGTCGAGTG
GCGTAAAAAC ACCGGCAGGG 1301 CGCAAATCGG CGTGTCCGCA CAATTTACCC
GATTCAGCCA CGACAGCCGC 1351 CAAGACGGCA GCCGCCTGGT CGTCTATCCC
GACATCAAAT GGGATTTCAG 1401 CAACAGCTGG GGCTATGTCC GTCCCAAACT
CGGACTGCAC GCCACCTATT 1451 ACAGCCTCAA CCGCTTCGGC AGCCAAGAAG
CCCGACGCGT CAGCCGCACT 1501 CTGCCCATTG TCAACATCGA CAGCGGCGCA
ACTTTTGAGC GGAATACGCG 1551 GATGTTCGGC GGAGAAGTCC TGCAAACCCT
CGAGCCGCGC CTGTTCTACA 1601 ACTATATTCC TGCCAAATCC CAAAACGACC
TGCCCAATTT CGATTCGTCG 1651 GAAAGCAGCT TCGGCTACGG GCAGCTCTTT
CGCGAAAACC TCTATTACGG 1701 CAACGACAGG ATTAACACCG CAAACAGCCT
TTCCGCCGCC GTGCAAAGCC 1751 GTATTTTGGA CGGCGCGACG GGGGAAGAGC
GTTTCCGCGC CGGCATCGGT 1801 CAGAAATTCT ATTTCAAGGA TGATGCGGTG
ATGCTTGACG GCAGCGTCGG 1851 CAAAAAACCG CGCAACCGTT CCGACTGGGT
GGCATTTGCC TCCGGCAGCA 1901 TCGGCAGCCG CTTCATCCTC GACAGCAGCA
TCCACTACAA CCAAAACGAC 1951 AAACGCGCCG AGAACTACGC CGTCGGTGCA
AGCTACCGTC CCGCACAGGG 2001 CAAAGTGCTG AACGCCCGCT ACAAATACGG
GCGCAACGAA AAAATCTACC 2051 TGAAGTCCGA CGGTTCCTAT TTTTACGACA
AACTCAGCCA GCTCGACCTG 2101 TCCGCACAAT GGCCGCTGAC GCGCAACCTG
TCGGCCGTCG TCCGTTACAA 2151 CTACGGTTTT GAAGCCAAAA AACCGATAGA
GGTGCTGGCG GGTGCGGAAT 2201 ACAAAAGCAG TTGCGGCTGC TGGGGCGCGG
GCGTGTACGC CCAACGCTAC 2251 GTTACCGGCG AAAACACCTA CAAAAACGCT
GTCTTTTTCT CACTTCAGTT 2301 GAAAGACCTC AGCAGTGTCG GCAGAAACCC
CGCAGACAGG ATGGATGTCG 2351 CCGTTCCCGG CTATATCACC GCCCACTCTC
TTTCCGCCGG ACGCAACAAA 2401 CGACCCTGA
This corresponds to the amino acid sequence <SEQ ID 2932; ORF
958>:
TABLE-US-03442 m958.pep 1 LARLFSLKPL VLALGLCFGT HCAAADAVAA
EETDNPTAGE SVRSVSEPIQ 51 PTSLSLGSTC LFCSNESGSP ERTEAAVQGS
GEASIPEDYT RIVADRMEGQ 101 SQVQVRAEGN VVVERNRTTL NTDWADYDQS
GDTVTAGDRF ALQQDGTLIR 151 GETLTYNLEQ QTGEAHNVRM EIEQGGRRLQ
SVSRTAEMLG EGHYKLTETQ 201 FNTCSAGDAG WYVKAASVEA DREKGIGVAK
HAAFVFGGVP IFYTPWADFP 251 LDGNRKSGLL VPSLSAGSDG VSLSVPYYFN
LAPNLDATFA PSVIGERGAV 301 FDGQVRYLRP DYAGQSDLTW LPHDKKSGRN
NRYQAKWQHR HDISDTLQAG 351 VDFNQVSDSG YYRDFYGNKE IAGNVNLNRR
VWLDYGGRAA GGSLNAGLSV 401 LKYQTLANQS GYKDKPYALM PRLSVEWRKN
TGRAQIGVSA QFTRFSHDSR 451 QDGSRLVVYP DIKWDFSNSW GYVRPKLGLH
ATYYSLNRFG SQEARRVSRT 501 LPIVNIDSGA TFERNTRMFG GEVLQTLEPR
LFYNYIPAKS QNDLPNFDSS 551 ESSFGYGQLF RENLYYGNDR INTANSLSAA
VQSRILDGAT GEERFRAGIG 601 QKFYFKDDAV MLDGSVGKKP RNRSDWVAFA
SGSIGSRFIL DSSIHYNQND 651 KRAENYAVGA SYRPAQGKVL NARYKYGRNE
KIYLKSDGSY FYDKLSQLDL 701 SAQWPLTRNL SAVVRYNYGF EAKKPIEVLA
GAEYKSSCGC WGAGVYAQRY 751 VTGENTYKNA VFFSLQLKDL SSVGRNPADR
MDVAVPGYIT AHSLSAGRNK 801 RP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 958
shows 89.3% identity over a 802 aa overlap with a predicted ORF
(ORF 958) from N. gonorrhoeae
TABLE-US-03443 m958/g958 89.3% identity in 802 aa overlap 10 20 30
40 50 60 m958.pep
LARLFSLKPLVLALGLCFGTHCAAADAVAAEELDNPTAGESVRSVSEPIQPTSLSLGSTC
|||||||||||||||:|||||||| |:|||||:|: :| :::::|| | ::|:||||| g958
LARLFSLKPLVLALGFCFGTHCAA-DTVAAEEADGRVAEGGAQGASESAQASDLTLGSTC 10 20
30 40 50 70 80 90 100 110 120 m958.pep
LFCSNESGSPERTEAAVQGSGEASIPEDYTRIVADRMEGQSQVQVRAEGNVVVERNRTTL
||||||||||||||||||||||||:||||||||||||||||:|:|||||:|::||: ::| g958
LFCSNESGSPERTEAAVQGSGEASVPEDYTRIVADRMEGQSKVKVRAEGSVIIERDGAVL 60 70
80 90 100 110 130 140 150 160 170 180 m958.pep
NTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQQTGEAHNVRMEIEQGGRRLQ
|||||||||||||||:||||||||||||||||||||||:|||||||||||| |||||||| g958
NTDWADYDQSGDTVTVGDRFALQQDGTLIRGETLTYNLDQQTGEAHNVRMETEQGGRRLQ 120
130 140 150 160 170 190 200 210 220 230 240 m958.pep
SVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASVEADREKGIGVAKHAAFVFGGVP
||||||||||||:||||||||||||||||||||||||||||| ||||||||||||||||| g958
SVSRTAEMLGEGRYKLTETQFNTCSAGDAGWYVKAASVEADRGKGIGVAKHAAFVFGGVP 180
190 200 210 220 230 250 260 270 280 290 300 m958.pep
IFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVPYYFNLAPNLDATFAPSVIGERGAV
:||||||||||||||||||||||:||||||||||||||||||||:||||||::||||||: g958
LFYLPWADFPLDGNRKSGLLVPSVSAGSDGVSLSVPYYFNLAPNFDATFAPGIIGERGAT 240
250 260 270 280 290 310 320 330 340 350 360 m958.pep
FDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQAKWQHRHDISDTLQAGVDFNQVSDSG
||||:|||||||:||:|||||||||||||||||||||||||||||||||||||||||||| g958
FDGQIRYLRPDYSGQTDLTWLPHDKKSGRNNRYQAKWQHRHDISDTLQAGVDFNQVSDSG 300
310 320 330 340 350 370 380 390 400 410 420 m958.pep
YYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGGSLNAGLSVLKYQTLANQSGYKDKPYALM
|||||||::||||||||||||||||||||||||||||||| ||||||||||||:|||:| g958
YYRDFYGGEEIAGNVNLNRRVWLDYGGRAAGGSLNAGLSVQKYQTLANQSGYKDEPYAIM 360
370 380 390 400 410 430 440 450 460 470 480 m958.pep
PRLSVEWRKNTGRAQIGVSAQFTRFSHDSRQDGSRLVVYPDIKWDFSNSWGYVRPKLGLH
||||::|:||:|||||||||||||||||:||||||||||| ||||||||||||||||||| g958
PRLSADWHKNAGRAQIGVSAQFTRFSHDGRQDGSRLVVYPGIKWDFSNSWGYVRPKLGLH 420
430 440 450 460 470 490 500 510 520 530 540 m958.pep
ATYYSLNRFGSQEARRVSRTLPIVNIDSGATFERNTRMFGGEVLQTLEPRLFYNYIPAKS
||||||: ||:: :| |:|:||:||||:|:|||||||:||| |:||:||||||||||||| g958
ATYYSLDSFGGKASRSVGRVLPVVNIDGGTTFERNTRLFGGGVVQTIEPRLFYNYIPAKS 480
490 500 510 520 530 550 560 570 580 590 600 m958.pep
QNDLPNFDSSESSFGYGQLFRENLYYGNDRINTANSLSAAVQSRILDGATGEERFRAGIG
||||||||||||||||||||||||||||||||:|||||:||||||||||||||||||||| g958
QNDLPNFDSSESSFGYGQLFRENLYYGNDRINAANSLSTAVQSRILDGATGEERFRAGIG 540
550 560 570 580 590 610 620 630 640 650 660 m958.pep
QKFYFKDDAVMLDGSVGKKPRNRSDWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGA
||||||||||||||||||:||:||||||||||:||:|| |||||||||||||||:||||| g958
QKFYFKDDAVMLDGSVGKNPRSRSDWVAFASGGIGGRFTLDSSIHYNQNDKRAEHYAVGA 600
610 620 630 640 650 670 680 690 700 710 720 m958.pep
SYRPAQGKVLNARYKYGRNEKIYLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGF :||||
||||||||||||||||||::|||||||||||||||||||||||||||||||||| g958
GYRPAPGKVLNARYKYGRNEKIYLQADGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGF 660
670 680 690 700 710 730 740 750 760 770 780 m958.pep
EAKKPIEVLAGAEYKSSCGCWGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADR
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||| | g958
EAKKPIEMLAGAEYKSSCGCWGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPAGR 720
730 740 750 760 770 790 800 m958.pep MDVAVPGYITAHSLSAGRNKRP
||||||||| |||||||||||| g958 MDVAVPGYIPAHSLSAGRNKRPX 780 790 800
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2933>:
TABLE-US-03444 a958.seq 1 TTGGCTCGTT TATTTTCACT CAAACCACTG
GTGCTGGCAT TGGGCTTCTG 51 TTTCGGCACG CATTGCGCCG CCGCCGATGC
CGTTGCGGCG GAGGAAACGG 101 ACAATCCGAC CGCCGGAGGA AGCGTTCGGA
GCGTGTCCGA ACCCATACAG 151 CCTACCAGCC TGAGCCTCGG TTCGACCTGC
CTGTTTTGCA GTAACGAAAG 201 CGGCAGCCCC GAGAGAACCG AAGCCGCCGT
CCAAGGCAGC GGCGAAGCAT 251 CCATCCCCGA AGACTATACG CGCATTGTTG
CCGACAGGAT GGAAGGACAG 301 TCGCAGGTGC AGGTGCGTGC CGAAGGCAAC
GTCGTCGTCG AACGCAATCG 351 GACGACCCTC AATGCCGATT GGGCGGATTA
CGACCAGTCG GGCGACACCG 401 TTACCGCAGG CGACCGGTTC GCCCTCCAAC
AGGACGGTAC GCTGATTCGG 451 GGCGAAACCC TGACCTACAA TCTCGAGCAG
CAGACCGGGG AAGCGCACAA 501 CGTCCGTATG GAAACCGAAC ACGGCGGACG
GCGGCTGCAA AGCGTCAGCC 551 GCACCGCCGA AATGTTGGGC GAAGGGCATT
ACAAACTGAC GGAAACCCAA 601 TTCAACACCT GTTCCGCCGG CGATGCCGGC
TGGTATGTCA AGGCCGCTTC 651 CGTCGAAGCC GATCGGGAAA AAGGCATAGG
CGTTGCCAAA CACGCCGCCT 701 TCGTGTTCGG CGGCGTTCCC ATTTTCTACA
CCCCTTGGGC GGACTTCCCG 751 CTTGACGGCA ACCGCAAAAG CGGCCTGCTC
GTTCCCTCAC TGTCCGCCGG 801 TTCGGACGGC GTTTCCCTTT CCGTTCCCTA
TTATTTCAAC CTTGCCCCCA 851 ATCTCGATGC CACGTTCGCG CCCGGCGTGA
TCGGCGAACG CGGCGCGGTC 901 TTTGACGGGC AGGTACGCTA CCTGCGGCCG
GATTATGCCG GCCAGTCCGA 951 CCTGACCTGG CTGCCGCACG ACAAGAAAAG
CGGCAGGAAT AACCGCTATC 1001 AGGCGAAATG GCAGCACCGG CACGACATTT
CCGACACGCT TCAGGCGGGT 1051 GTCGATTTCA ACCAAGTCTC CGACAGCGGC
TACTACCGCG ACTTTTACGG 1101 CAACAAAGAA ATCGCCGGCA ACGTCAACCT
CAACCGCCGT GTATGGCTGG 1151 ATTATGGCGG CAGGGCGGCG GGCGGCAGCC
TGAATGCCGG CCTTTCGGTT 1201 CTGAAATACC AGACGCTGGC AAACCAAAGC
GGCTACAAAG ACAAACCGTA 1251 TGCCCTGATG CCGCGCCTTT CCGCCGATTG
GCGCAAAAAC ACCGGCAGGG 1301 CGCAAATCGG CGTGTCCGCC CAATTTACCC
GCTTCAGCCA CGACAGCCGC 1351 CAAGACGGCA GCCGCCTCGT CGTCTATCCC
GACATCAAAT GGGATTTCAG 1401 CAACAGCTGG GGTTACGTCC GTCCCAAACT
CGGACTGCAC GCCACCTATT 1451 ACAGCCTCAA CCGCTTCGGC AGCCAAGAAG
CCCGACGCGT CAGCCGCACT 1501 CTGCCCATCG TCAACATCGA CAGCGGCATG
ACCTTCGAAC GCAATACGCG 1551 GATGTTCGGC GGCGGAGTCC TGCAAACCCT
CGAGCCGCGC CTGTTCTACA 1601 ACTATATTCC TGCCAAATCC CAAAACGACC
TGCCCAATTT CGATTCGTCG 1651 GAAAGCAGCT TCGGCTACGG GCAGCTTTTT
CGTGAAAACC TCTATTACGG 1701 CAACGACAGG ATTAACACCG CAAACAGCCT
TTCCGCCGCC GTGCAAAGCC 1751 GTATTTTGGA CGGCGCGACG GGGGAAGAGC
GTTTCCGCGC CGGCATCGGG 1801 CAGAAATTCT ACTTCAAAAA CGACGCAGTC
ATGCTTGACG GCAGTGTCGG 1851 CAAAAAACCG CGCAGCCGTT CCGACTGGGT
GGCATTCGCC TCCAGCGGCA 1901 TCGGCAGCCG CTTCATCCTC GACAGCAGCA
TCCACTACAA CCAAAACGAC 1951 AAACGCGCCG AGAACTACGC CGTCGGTGCA
AGCTACCGTC CCGCACAGGG 2001 CAAAGTGCTG AACGCCCGCT ACAAATACGG
GCGCAACGAA AAAATCTACC 2051 TGAAGTCCGA CGGTTCCTAT TTTTACGACA
AACTCAGCCA GCTCGACCTG 2101 TCCGCACAAT GGCCGCTGAC GCGCAACCTG
TCGGCCGTCG TCCGTTACAA 2151 CTACGGTTTT GAAGCCAAAA AACCGATAGA
GGTGCTGGCG GGTGCGGAAT 2201 ACAAAAGCAG TTGCGGCTGC TGGGGCGCGG
GCGTGTACGC CCAACGCTAC 2251 GTTACCGGCG AAAACACCTA CAAAAACGCT
GTCTTTTTCT CACTTCAGTT 2301 GAAAGACCTC AGCAGTGTCG GCAGAAACCC
CGCAGACAGG ATGGATGTCG 2351 CCGTTCCCGG CTATATCCCC GCCCACTCTC
TTTCCGCCGG ACGCAACAAA 2401 CGGCCCTGA
This corresponds to the amino acid sequence <SEQ ID 2934; ORF
958.a>:
TABLE-US-03445 a958.pep 1 LARLFSLKPL VLALGFCFGT HCAAADAVAA
EETDNPTAGG SVRSVSEPIQ 51 PTSLSLGSTC LFCSNESGSP ERTEAAVQGS
GEASIPEDYT RIVADRMEGQ 101 SQVQVRAEGN VVVERNRTTL NADWADYDQS
GDTVTAGDRF ALQQDGTLIR 151 GETLTYNLEQ QTGEAHNVRM ETEHGGRRLQ
SVSRTAEMLG EGHYKLTETQ 201 FNTCSAGDAG WYVKAASVEA DREKGIGVAK
HAAFVFGGVP IFYTPWADFP 251 LDGNRKSGLL VPSLSAGSDG VSLSVPYYFN
LAPNLDATFA PGVIGERGAV 301 FDGQVRYLRP DYAGQSDLTW LPHDKKSGRN
NRYQAKWQHR HDISDTLQAG 351 VDFNQVSDSG YYRDFYGNKE IAGNVNLNRR
VWLDYGGRAA GGSLNAGLSV 401 LKYQTLANQS GYKDKPYALM PRLSADWRKN
TGRAQIGVSA QFTRFSHDSR 451 QDGSRLVVYP DIKWDFSNSW GYVRPKLGLH
ATYYSLNRFG SQEARRVSRT 501 LPIVNIDSGM TFERNTRMFG GGVLQTLEPR
LFYNYIPAKS QNDLPNFDSS 551 ESSFGYGQLF RENLYYGNDR INTANSLSAA
VQSRILDGAT GEERFRAGIG 601 QKFYFKNDAV MLDGSVGKKP RSRSDWVAFA
SSGIGSRFIL DSSIHYNQND 651 KRAENYAVGA SYRPAQGKVL NARYKYGRNE
KIYLKSDGSY FYDKLSQLDL 701 SAQWPLTRNL SAVVRYNYGF EAKKPIEVLA
GAEYKSSCGC WGAGVYAQRY 751 VTGENTYKNA VFFSLQLKDL SSVGRNPADR
MDVAVPGYIP AHSLSAGRNK 801 RP*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 957
shows 96.3% identity over a 377 aa overlap with a predicted ORF
(ORF 957) from N. meningitidis
TABLE-US-03446 a958/m958 98.1% identity in 802 aa overlap 10 20 30
40 50 60 a958.pep
LARLFSLKPLVLALGFCFGTHCAAADAVAAEELDNPTAGGSVRSVSEPIQPTSLSLGSTC
|||||||||||||||:||||||||||||||||||||||| |||||||||||||||||||| m958
LARLFSLKPLVLALGLCFGTHCAAADAVAAEELDNPTAGESVRSVSEPIQPTSLSLGSTC 10 20
30 40 50 60 70 80 90 100 110 120 a958.pep
LFCSNESGSPERTEAAVQGSGEASIPEDYTRIVADRMEGQSQVQVRAEGNVVVERNRTTL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
LFCSNESGSPERTEAAVQGSGEASIPEDYTRIVADRMEGQSQVQVRAEGNVVVERNRTTL 70 80
90 100 110 120 130 140 150 160 170 180 a958.pep
NADWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQQTGEAHNVRMETEHGGRRLQ
|:||||||||||||||||||||||||||||||||||||||||||||||||| |:|||||| m958
NTDWADYDQSGDTVTAGDRFALQQDGTLIRGELLTYNLEQQTGEAHNVRMEIEQGGRRLQ 130
140 150 160 170 180 190 200 210 220 230 240 a958.pep
SVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASVEADREKGIGVAKHAAFVFGGVP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
SVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASVEADREKGIGVAKHAAFVFGGVP 190
200 210 220 230 240 250 260 270 280 290 300 a958.pep
IFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVPYYFNLAPNLDATFAPGVIGERGAV
|||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||| m958
IFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVPYYFNLAPNLDATFAPSVIGERGAV 250
260 270 280 290 300 310 320 330 340 350 360 a958.pep
FDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQAKWQHRHDISDTLQAGVDFNQVSDSG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
FDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQAKWQHRHDISDTLQAGVDFNQVSDSG 310
320 330 340 350 360 370 380 390 400 410 420 a958.pep
YYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGGSLNAGLSVLKYQTLANQSGYKDKPYALM
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
YYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGGSLNAGLSVLKYQTLANQSGYKDKPYALM 370
380 390 400 410 420 430 440 450 460 470 480 a958.pep
PRLSADWRKNTGRAQIGVSAQFTRFSHDSRQDGSRLVVYPDIKWDFSNSWGYVRPKLGLH
||||::|||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
PRLSVEWRKNTGRAQIGVSAQFTRFSHDSRQDGSRLVVYPDIKWDFSNSWGYVRPKLGLH 430
440 450 460 470 480 490 500 510 520 530 540 a958.pep
ATYYSLNRFGSQEARRVSRTLPIVNIDSGMTFERNTRMFGGGVLQTLEPRLFYNYIPAKS
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| m958
ATYYSLNRFGSQEARRVSRTLPIVNIDSGATFERNTRMFGGEVLQTLEPRLFYNYIPAKS 490
500 510 520 530 540 550 560 570 580 590 600 a958.pep
QNDLPNFDSSESSFGYGQLFRENLYYGNDRINTANSLSAAVQSRILDGATGEERFRAGIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
QNDLPNFDSSESSFGYGQLFRENLYYGNDRINTANSLSAAVQSRILDGATGEERFRAGIG 550
560 570 580 590 600 610 620 630 640 650 660 a958.pep
QKFYFKNDAVMLDGSVGKKPRSRSDWVAFASSGIGSRFILDSSIHYNQNDKRAENYAVGA
||||||:||||||||||||||:|||||||||::||||||||||||||||||||||||||| m958
QKFYFKDDAVMLDGSVGKKPRNRSDWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGA 610
620 630 640 650 660 670 680 690 700 710 720 a958.pep
SYRPAQGKVLNARYKYGRNEKIYLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
SYRPAQGKVLNARYKYGRNEKIYLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGF 670
680 690 700 710 720 730 740 750 760 770 780 a958.pep
EAKKPIEVLAGAEYKSSCGCWGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADR
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m958
EAKKPIEVLAGAEYKSSCGCWGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADR 730
740 750 760 770 780 790 800 a958.pep MDVAVPGYIPAHSLSAGRNKRPX
||||||||| |||||||||||| m958 MDVAVPGYITAHSLSAGRNKRP 790 800
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2935>:
TABLE-US-03447 g959.seq 1 ATGAACATCA AACACCTTCT CTTGACCGCC
GCCGCAACCG CACTGTTGGG 51 CATTTCCGCC CCCGCACTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACGGCAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCGGC TTGGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACG ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2936; ORF
959.ng>:
TABLE-US-03448 g959.pep 1 MNIKHLLLTA AATALLGISA PALAHHDGHG
DDDHGHAAHQ HGKQDKIISR 51 AQAEKAAWAR VGGKITDIDL EHDDGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2937>:
TABLE-US-03449 m959.seq 1 ATGAACATCA AACACCTTCT CTTGACCTCC
GCCGCAACCG CACTGCTGAG 51 CATTTCCGCC CCCGCGCTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACAACAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCAGC GTTGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACA ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2938; ORF
959>:
TABLE-US-03450 m959.pep 1 MNIKHLLLTS AATALLSISA PALAHHDGHG
DDDHGHAAHQ HNKQDKIISR 51 AQAEKAALAR VGGKITDIDL EHDNGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 959
shows 95.4% identity over a 108 aa overlap with a predicted ORF
(ORF 959) from N. gonorrhoeae
TABLE-US-03451 m959/g959 95.4% identity in 108 aa overlap 10 20 30
40 50 60 m959.pep
MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQDKIISRAQAEKAALAR
|||||||||:||||||:||||||||||||||||||||||||:||||||||||||||| || g959
MNIKHLLLTAAATALLGISAPALAHHDGHGDDDHGHAAHQHGKQDKIISRAQAEKAAWAR 10 20
30 40 50 60 70 80 90 100 109 m959.pep
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX
|||||||||||||:||||||||||||||||||||||||||||||||||| g959
VGGKITDIDLEHDDGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX 70 80 90 100
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2939>:
TABLE-US-03452 a959.seq 1 ATGAACTTCA AACGCCTTCT CTTGACCGCC
GCCGCAACCG CACTGATGGG 51 CATTTCCGCC CCCGCACTCG CCCACCACGA
CGGACACGGC GATGACGACC 101 ACGGACACGC CGCACACCAA CACAGCAAAC
AAGACAAAAT CATCAGCCGC 151 GCCCAAGCCG AAAAAGCAGC GTTGGCGCGT
GTCGGCGGCA AAATCACCGA 201 CATCGATCTC GAACACGACA ACGGCCGTCC
GCACTATGAT GTCGAAATCG 251 TCAAAAACGG ACAGGAATAC AAAGTCGTTG
TCGATGCCCG TACCGGCCGC 301 GTGATTTCCT CCCGCCGCGA CGACTGA
This corresponds to the amino acid sequence <SEQ ID 2940; ORF
959.a>:
TABLE-US-03453 a959.pep 1 MNFKRLLLTA AATALMGISA PALAHHDGHG
DDDHGHAAHQ HSKQDKIISR 51 AQAEKAALAR VGGKITDIDL EHDNGRPHYD
VEIVKNGQEY KVVVDARTGR 101 VISSRRDD*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 959
shows 94.4% identity over a 108 aa overlap with a predicted ORF
(ORF 959) from N. meningitidis
TABLE-US-03454 a959/m959 94.4% identity in 108 aa overlap 10 20 30
40 50 60 a959.pep
MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQDKIISRAQAEKAALAR
||:|:||||:|||||::||||||||||||||||||||||||:|||||||||||||||||| m959
MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQDKIISRAQAEKAALAR 10 20
30 40 50 60 70 80 90 100 109 a959.pep
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX
||||||||||||||||||||||||||||||||||||||||||||||||| m959
VGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVISSRRDDX 70 80 90 100
[0449] g960.seq not found yet
[0450] g960.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2941>:
TABLE-US-03455 m960.seq 1 ATGCAAGTAA ATATTCAGAT TCCCTGTATG
CTGTACAGAC GCGGGAGTGT 51 TAAGCCCCCC TTGTTTGAAG CTCCGCGGCT
CCTGCCGAGC TTCACCGACC 101 CCGTTGTGCC CAAGCTCTCT GCTCCCGGCG
GCTACATTGT CGACATCCCC 151 AAAGGCAATC TGAAAACCGA AATCGAAAAG
CTGGCCAAAC AGCCCGAGTA 201 TGCCTATCTG AAACAGCTCC AAGTAGCGAA
AAACGTCAAC TGGAACCAGG 251 TGCAACTGGC TTACGATAAA TGGGACTATA
AGCAGGAAGG CTTAACCAGA 301 GCCGGTGCAG CGATTATCGC GCTGGCTGTT
ACCGTGGTTA CTGCGGGCGC 351 GGGAGTCGGA GCCGCACTAG GCTTAAACGG
CGCAGCCGCA GCAGCGGCCG 401 ATGCCGCCTT TGCCTCACTC GCTTCTCAGG
CTTCCGTATC GCTCATCAAC 451 AATAAAGGCG ATGTCGGCAA AACCCTGAAG
GAACTGGGCA GAAGCCGCAC 501 GGTAAAAAAT CTGGTTGTAG CGGCGGCAAC
GGCAGGCGTA TCCAACAAAC 551 TCGGTGCCTC TTCCCTTGCC ACTTGGAGCG
AAACCCCTTG GGTAAACAAC 601 CTCAACGTTA ACCTGGCCAA TGCGGGCAGT
GCCGCGCTGA TCAACACCGC 651 TGTTAACGGC GGCAGCCTGA AAGACAATCT
GGAGGCAAAT ATCCTGGCGG 701 CATTGGTGAA TACCGCGCAT GGGGAGGCGG
CGAGTAAGAT CAAAGGACTG 751 GATCAGCACT ATGTCGCCCA CAAAATCGCT
CATGCCGTAG CGGGCTGTGC 801 GGCTGCAGCG GCGAATAAGG GCAAATGTCA
GGACGGCGCG ATCGGTGCGG 851 CTGTGGGTGA GATTGTCGGG GAGGCTTTGG
TTAAAAATAC CGATTTTAGC 901 GATATGACCC CGGAACAATT AGATCTGGAA
GTTAAGAAAA TTACCGCCTA 951 TGCCAAACTT GCGGCAGGTA CAGTTGCAGG
CGTAACGGGA GGAGATGTCA 1001 ATACTGCTGC ACAAACCGCA CAAAACGCGG
TAGAAAATAA TGCGGTTAAA 1051 GCTGTTGTAA CTGCTGCAAA AGTGGTTTAT
AAGGTAGCCA GAAAAGGATT 1101 AAAAAACGGG AAAATCAACG TTAGAGATTT
AAAACAGACG TTGAAAGACG 1151 AAGGTTATAA TTTAGCCGAC AACCTGACCA
CCTTATTCGA CGAAACATTG 1201 GATTGGAACG ATGCCAAAGC CGTTATTGAT
ATTGTCGTCG GAACAGAGCT 1251 GAATCGCGCT AATAAAGGGG AAGCGGCACA
AAAGGTCAAG GAAGTTTTAG 1301 AAAAAAATCG TCCTTATATC CCTAATAAAG
GTGCTGTACC GAATATGAGT 1351 ACATACATGA AAAATAATCC TTTTGGAAAA
CAGCTGGCTC AAATTTCAGA 1401 AAAGACAACG CTTCCGACGC AGCAAGGGCA
GTCTGTCTTC TTGGTAAAAA 1451 GAAACCAAGG GTTATTAAAA ACCGGTGATA
GGTTTTATTT AGATGGCCAA 1501 CATAAAAATC ATTTAGAGGT TTTTGATAAA
AATGGGAACT TTAAGTTTGT 1551 TCTAAATATG GATGGTTCGC TTAACCAAAT
GAAAACTGGG GCAGCAAAAG 1601 GTCGTAAATT AAACTTAAAA TAG
This corresponds to the amino acid sequence <SEQ ID 2942; ORF
960>:
TABLE-US-03456 m960.pep 1 MQVNIQIPCM LYRRGSVKPP LFEAPRLLPS
FTDPVVPKLS APGGYIVDIP 51 KGNLKTEIEK LAKQPEYAYL KQLQVAKNVN
WNQVQLAYDK WDYKQEGLTR 101 AGAAIIALAV TVVTAGAGVG AALGLNGAAA
AAADAAFASL ASQASVSLIN 151 NKGDVGKTLK ELGRSRTVKN LVVAAATAGV
SNKLGASSLA TWSETPWVNN 201 LNVNLANAGS AALINTAVNG GSLKDNLEAN
ILAALVNTAH GEAASKIKGL 251 DQHYVAHKIA HAVAGCAAAA ANKGKCQDGA
IGAAVGEIVG EALVKNTDFS 301 DMTPEQLDLE VKKITAYAKL AAGTVAGVTG
GDVNTAAQTA QNAVENNAVK 351 AVVTAAKVVY KVARKGLKNG KINVRDLKQT
LKDEGYNLAD NLTTLFDETL 401 DWNDAKAVID IVVGTELNRA NKGEAAQKVK
EVLEKNRPYI PNKGAVPNMS 451 TYMKNNPFGK QLAQISEKTT LPTQQGQSVF
LVKRNQGLLK TGDRFYLDGQ 501 HKNHLEVFDK NGNFKFVLNM DGSLNQMKTG
AAKGRKLNLK *
[0451] a960.seq not found yet
[0452] a960.pep not found yet
[0453] g961.seq not found yet
[0454] g961.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2943>:
TABLE-US-03457 m961.seq 1 ATGAGCATGA AACACTTTCC AGCCAAAGTA
CTGACCACAG CCATCCTTGC 51 CACTTTCTGT AGCGGCGCAC TGGCAGCCAC
AAGCGACGAC GATGTTAAAA 101 AAGCTGCCAC TGTGGCCATT GTTGCTGCCT
ACAACAATGG CCAAGAAATC 151 AACGGTTTCA AAGCTGGAGA GACCATCTAC
GACATTGGTG AAGACGGCAC 201 AATTACCCAA AAAGACGCAA CTGCAGCCGA
TGTTGAAGCC GACGACTTTA 251 AAGGTCTGGG TCTGAAAAAA GTCGTGACTA
ACCTGACCAA AACCGTCAAT 301 GAAAACAAAC AAAACGTCGA TGCCAAAGTA
AAAGCTGCAG AATCTGAAAT 351 AGAAAAGTTA ACAACCAAGT TAGCAGACAC
TGATGCCGCT TTAGCAGATA 401 CTGATGCCGC TCTGGATGAA ACCACCAACG
CCTTGAATAA ATTGGGAGAA 451 AATATAACGA CATTTGCTGA AGAGACTAAG
ACAAATATCG TAAAAATTGA 501 TGAAAAATTA GAAGCCGTGG CTGATACCGT
CGACAAGCAT GCCGAAGCAT 551 TCAACGATAT CGCCGATTCA TTGGATGAAA
CCAACACTAA GGCAGACGAA 601 GCCGTCAAAA CCGCCAATGA AGCCAAACAG
ACGGCCGAAG AAACCAAACA 651 AAACGTCGAT GCCAAAGTAA AAGCTGCAGA
AACTGCAGCA GGCAAAGCCG 701 AAGCTGCCGC TGGCACAGCT AATACTGCAG
CCGACAAGGC CGAAGCTGTC 751 GCTGCAAAAG TTACCGACAT CAAAGCTGAT
ATCGCTACGA ACAAAGCTGA 801 TATTGCTAAA AACTCAGCAC GCATCGACAG
CTTGGACAAA AACGTAGCTA 851 ATCTGCGCAA AGAAACCCGC CAAGGCCTTG
CAGAACAAGC CGCGCTCTCC 901 GGCCTGTTCC AACCTTACAA CGTGGGTCGG
TTCAATGTAA CGGCTGCAGT 951 CGGCGGCTAC AAATCCGAAT CGGCAGTCGC
CATCGGTACC GGCTTCCGCT 1001 TTACCGAAAA CTTTGCCGCC AAAGCAGGCG
TGGCAGTCGG CACTTCGTCC 1051 GGTTCTTCCG CAGCCTACCA TGTCGGCGTC
AATTACGAGT GGTAA
This corresponds to the amino acid sequence <SEQ ID 940; ORF
2944>:
TABLE-US-03458 m961.pep 1 MSMKHFPAKV LTTAILATFC SGALAATSDD
DVKKAATVAI VAAYNNGQEI 51 NGFKAGETIY DIGEDGTITQ KDATAADVEA
DDFKGLGLKK VVTNLTKTVN 101 ENKQNVDAKV KAAESEIEKL TTKLADTDAA
LADTDAALDE TTNALNKLGE 151 NITTFAEETK TNIVKIDEKL EAVADTVDKH
AEAFNDIADS LDETNTKADE 201 AVKTANEAKQ TAEETKQNVD AKVKAAETAA
GKAEAAAGTA NTAADKAEAV 251 AAKVTDIKAD IATNKADIAK NSARIDSLDK
NVANLRKETR QGLAEQAALS 301 GLFQPYNVGR FNVTAAVGGY KSESAVAIGT
GFRFTENFAA KAGVAVGTSS 351 GSSAAYHVGV NYEW*
[0455] a961.seq not found yet
[0456] a961.pep not found yet
[0457] g972.seq not found yet
[0458] g972.pep not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2945>:
TABLE-US-03459 m972.seq 1 TTGACTAACA GGGGGGGAGC GAAATTAAAA
ACCArTTCCA AGAGTAGTGA 51 ACGAATGAGT GAAGTTGAAT ATTTCTCACA
CTTTATATCG GACGGAAAAG 101 GGAAGCTTTT AGAAATTCCG CAGCGAAGAG
GTAAGCAAGA CggGGTTTTT 151 GTTGATTGGA TTTCATTCAC ATTCCATGAA
GATACTTTAC TGAAAGTTTC 201 CGGTTGCCCT TTATTTTCTG ATGCTGAATA
CATGTATGTA TTAAGCAGAA 251 AGCTGGAAGA AATTCTAGGT TTTGGCATAA
CGCGCAAATG CAAATCAAGG 301 GGCAACAAAT TCTATGAATC CATGTATAGG
TTAGGTTCGG ATGATGTTGA 351 TTATGGAGAG GTGCATTTCG GArGTCAGCG
CAATACTGTT TTAGTTGAGT 401 TGAAAGGTAC TGGTTGCAGC GTTGCAAGTC
CGGGTTGGGA GTTGAGGCTA 451 AAGCAGTTTC TCGATGATTC GATAAGGACA
AGAATAACGC GAATTGACCT 501 AGCACTTGAT TTTTTTGATG GAGAGTACAC
GCCGGATCAG GCGTTGTTAG 551 ATCACGATAA TGGTTTTTTT GATAACAGCA
ATCAAAGGCC GAAATCTGAA 601 ACGATCGGTA CGGCTTGGCG GAATGAGGAC
GGGAGCGGCA AGACATTTTA 651 TGTAGGTCGC AAGAAAAATT CTCGTTTTGT
TCGTGTTTAT GAGAAAGGCA 701 GGCAGCTTGG AGATAAAGAA AGCAAATGGG
TAAGGTTCGA GATCCAGTTT 751 AATTATGGAG ATATAGAAAT ACCCTTGGAT
ATTTTAATAA ATCAGGGTTC 801 GTATTTCTGT GGAGCTTTTC CAATTTGTAG
AAAATTTAAA AATATGCCGG 851 TTCCCGAAAG GTTTGATCAG AGAAAGAAAA
AGCTTAATTT AACTTTCGAG 901 CATAAATTGC ATTACGCGAA AAACGCGGTT
GGAAAACTGG TCAATTTCAT 951 GATTGAAATG GGTTTTGATA ATAGCGAAAT
TGTGGAATCT TTAAAGGCAG 1001 ATTCGGGATT TCCCAAAGGA TTAGAACCTG
AAAAATATGC TCTGGAAATG 1051 TTAAGGGACG GTTTGAAACA CGGTTTTATT
CATGAACAGC CGGATATTGA 1101 TTTGGAAATT GAACTTGATG AATTGGGGGT
TATTGCTTTT AAAAATTCTG 1151 ACAAATTCGA TAGGGAAAAA AGGCTTTTTA
GTCCTGATTA TGATGTCGAG 1201 AAAGAAAGGA AATATCAGGA ATATTTAAGT
AAAGTTTATC ATCAAAATGT 1251 AGATTATGAT TATTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2946; ORF
972>:
TABLE-US-03460 m972.pep 1 LTNRGGAKLK TXSKSSERMS EVEYFSHFIS
DGKGKLLEIP QRRGKQDGVF 51 VDWISFTFHE DTLLKVSGCP LFSDAEYMYV
LSRKLEEILG FGITRKCKSR 101 GNKFYESMYR LGSDDVDYGE VHFGXQRNTV
LVELKGTGCS VASPGWELRL 151 KQFLDDSIRT RITRIDLALD FFDGEYTPDQ
ALLDHDNGFF DNSNQRPKSE 201 TIGTAWRNED GSGKTFYVGR KKNSRFVRVY
EKGRQLGDKE SKWVRFEIQF 251 NYGDIEIPLD ILINQGSYFC GAFPICRKFK
NMPVPERFDQ RKKKLNLTFE 301 HKLHYAKNAV GKLVNFMIEM GFDNSEIVES
LKADSGFPKG LEPEKYALEM 351 LRDGLKHGFI HEQPDIDLEI ELDELGVIAF
KNSDKFDREK RLFSPDYDVE 401 KERKYQEYLS KVYHQNVDYD YF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2947>:
TABLE-US-03461 a972.seq 1 TTGACTAACA GGGGGGGAGC GAAATTAAAA
ACCAATTCCA AGAGTAGTGA 51 ACGAATGAGT GAAGTTGAAT ATTTCTCACA
CTTTATATCG GACGGAAAAG 101 GGAAGCTTTT AGAAATTCCG CAGCGAAGAG
GTAAGCAAGA CGGGGTTTTT 151 GTTGATTGGA TTTCATTCAC ATTCCATGAA
GATACTTTAC TGAAAGTTTC 201 CGGTTGCCCT TTATTTTCTG ATGCTGAATA
CATGTATGTA TTAAGCAGAA 251 AGCTGGAAGA AATTCTAGGT TTTGGCATAA
CGCGCAAATG CAAATCAAGG 301 GGCAACAAAT TCTATGAATC CATGTATAGG
TTAGGTTCGG ATGATGTTGA 351 TTATGGAGAG GTGCATTTCG GAGGTCAGCG
CAATACTGTT TTAGTTGAGT 401 TGAAAGGTAC TGGTTGCAGC GTTGCAAGTC
CGGGTTGGGA GTTGAGGCTA 451 AAGCAGTTTC TCGATGATTC GATAAGGACA
AGAATAACGC GAATTGACCT 501 AGCACTTGAT TTTTTTGATG GAGAGTACAC
GCCGGATCAG GCGTTGTTAG 551 ATCACGATAA TGGTTTTTTT GATAACAGCA
ATCAAAGGCC GAAATCTGAA 601 ACGATCGGTA CGGCTTGGCG GAATGAGGAC
GGGAGCGGCA AGACATTTTA 651 TGTAGGTCGC AAGAAAAATT CTCGTTTTGT
TCGTGTTTAT GAGAAAGGCA 701 GGCAGCTTGG AGATAAAGAA AGCAAATGGG
TAAGGTTCGA GATCCAGTTT 751 AATTATGGAG ATATAGAAAT ACCCTTGGAT
ATTTTAATAA ATCAGGGTTC 801 GTATTTCTGT GGAGCTTTTC CAATTTGTAG
AAAATTTAAA AATATGCCGG 851 TTCCCGAAAG GTTTGATCAG AGAAAGAAAA
CGCTTAATTT AACTTTCGAG 901 CATAAATTGC ATTACGCGAA AAACGCGGTT
GGAAAACTGG TCAATTTCAT 951 GATTGAAATG GGTTTTGATA ATAGCGAAAT
TGTGGAATCT TTAAAGGCAG 1001 ATTCGGGATT TCCCAAAGGA TTAGAACCTG
AAAAATATGC TCTGGAAATG 1051 TTAAGGGACG GTTTGAAACA CGGTTTTATT
CATGAACAGC CGGATATTGA 1101 TTTGGAAATT GAACTTGATG AATTGGGGGT
TATTGCTTTT AAAAATTCTG 1151 ACAAATTCGA TAGGGAAAAA AGGCTTTTTA
GTCCTGATTA TGATGTCGAG 1201 AAAGAAAGGA AATATCAGGA ATATTTAAGT
AAAGTTTATC ATCAAAATGT 1251 AGATTATGAT TATTTTTAA
This corresponds to the amino acid sequence <SEQ ID 2948; ORF
972.a>:
TABLE-US-03462 a972.pep 1 LTNRGGAKLK TNSKSSERMS EVEYFSHFIS
DGKGKLLEIP QRRGKQDGVF 51 VDWISFTFHE DTLLKVSGCP LFSDAEYMYV
LSRKLEEILG FGITRKCKSR 101 GNKFYESMYR LGSDDVDYGE VHFGGQRNTV
LVELKGTGCS VASPGWELRL 151 KQFLDDSIRT RITRIDLALD FFDGEYTPDQ
ALLDHDNGFF DNSNQRPKSE 201 TIGTAWRNED GSGKTFYVGR KKNSRFVRVY
EKGRQLGDKE SKWVRFEIQF 251 NYGDIEIPLD ILINQGSYFC GAFPICRKFK
NMPVPERFDQ RKKTLNLTFE 301 HKLHYAKNAV GKLVNFMIEM GFDNSEIVES
LKADSGFPKG LEPEKYALEM 351 LRDGLKHGFI HEQPDIDLEI ELDELGVIAF
KNSDKFDREK RLFSPDYDVE 401 KERKYQEYLS KVYHQNVDYD YF* m972/a972 99.3%
identity in 422 aa overlap 10 20 30 40 50 60 m972.pep
LTNRGGAKLKTXSKSSERMSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHE
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| a972
LINRGGAKLKINSKSSERMSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFIFHE 10 20
30 40 50 60 70 80 90 100 110 120 m972.pep
DTLLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a972
DILLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE 70 80
90 100 110 120 130 140 150 160 170 180 m972.pep
VHFGXQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTPDQ ||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||| a972
VHFGGQRNTVLVELKGIGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTPDQ 130
140 150 160 170 180 190 200 210 220 230 240 m972.pep
ALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQLGDKE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a972
ALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQLGDKE 190
200 210 220 230 240 250 260 270 280 290 300 m972.pep
SKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKKLNLTFE
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| a972
SKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKTLNLTFE 250
260 270 280 290 300 310 320 330 340 350 360 m972.pep
HKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLRDGLKHGFI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a972
HKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLRDGLKHGFI 310
320 330 340 350 360 370 380 390 400 410 420 m972.pep
HEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLSKVYHQNVDYD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a972
HEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLSKVYHQNVDYD 370
380 390 400 410 420 m972.pep YFX ||| a972 YFX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2949>:
TABLE-US-03463 g973.seq 1 ATGGACGGCG CACAACCGAA AACAAATTTT
TTTGAACGCC TGATTGCCCG 51 actCGCCCGC GAACCCGATT CCGCCGAAGA
CGTATTAAAC CTGCTTCGGC 101 AGGCGCACGA ACAGGAAGTT TTTGATGCCG
ACACACTGAC CCGGCTGGAA 151 AAAGTATTGG ACTTTGCCGA GCTGGAAGTG
CGCGATGCGA TGATTACGCG 201 CAGCCGCATG AACGTATTGA AAGAAAACGA
CAGCATCGAA CGCATCACCG 251 CCTACGTCAT CGATACCGCC CATTCGCGCT
TCCCCGTCAT CGGCGAAGAC 301 AAAGACGAAG TTTTGGGCAT TTTGCACGCC
AAAGACCTGC TCAAATATAT 351 GTTCAACCCC GAGCAGTTCC ACCTGAAATC
CGTCTTGCGC CCTGCCGTTT 401 TCGTGCCCGA AGGCAAATCT TTGACCGCCC
TTTTAAAAGA GTTCCGCGAA 451 CAGCGCAACC ATATGGCAAT CGTCATCGAC
GAATACGGCG GCACGTCGGG 501 TTTGGTCACC TTTGAAGACA TCATCGAGCa
aatcgtcggt gacaTCGAAG 551 ACGAGTTTGA CGAAGACGAA AGCGccgacg
acatCCACTC cgTTTccgCC 601 GAACGCTGGC GCATCCacgc ggctaCCGAA
ATCGAAGaca TCAACGCCTT 651 TTTCGGTACG GAatacggca gcgaagaagc
cgacaccatc ggcggctTGG 701 TCATTCAGGA ATTGGGACAC CTGCCCGTGC
GCGGCGAAAA AGTCCTTAtc 751 ggcgGTTTGC agttcaccgt CGCCCGCGCC
GACAACCGCC GCCTGCACAC 801 GCTGATGGCG ACCCGCGTGA AGTAAGCAGA
GCCTGCCcgc accgccgttT 851 CTGCacAGTT TAG
This corresponds to the amino acid sequence <SEQ ID 2950; ORF
973.ng>:
TABLE-US-03464 g973.pep 1 MDGAQPKTNF FERLIARLAR EPDSAEDVLN
LLRQAHEQEV FDADTLTRLE 51 KVLDFAELEV RDAMITRSRM NVLKENDSIE
RITAYVIDTA HSRFPVIGED 101 KDEVLGILHA KDLLKYMFNP EQFHLKSVLR
PAVFVPEGKS LTALLKEFRE 151 QRNHMAIVID EYGGTSGLVT FEDIIEQIVG
DIEDEFDEDE SADDIHSVSA 201 ERWRIHAATE IEDINAFFGT EYGSEEADTI
GGLVIQELGH LPVRGEKVLI 251 GGLQFTVARA DNRRLHTLMA TRVK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2951>:
TABLE-US-03465 m973.seq 1 ATGGACGGCG CACAACCGAA AACGAATTTT
TTTGAACGCC TGATTGCCCG 51 ACTCGCCCGC GAACCCGATT CCGCCGAAGA
CGTATTAAAC CTGCTTCGGC 101 AGGCGCACGA GCAGGAAGTT TTTGATGCGG
ATACGCTTTT AAGATTGGAA 151 AAAGTCCTCG ATTTTTCCGA TTTGGAAGTG
CGCGACGCGA TGATTACGCG 201 CAGCCGTATG AACGTTTTAA AAGAAAACGA
CAGCATCGAG CGCATCACCG 251 CCTACGTTAT CGATACCGCC CATTCGCGCT
TCCCCGTCAT CGGCGAAGAC 301 AAAGACGAAG TTTTGGGCAT TTTGCACGCC
AAAGACCTGC TCAAATATAT 351 GTTTAACCCC GAGCAGTTCC ACCTCAAATC
CATTCTCCGC CCCGCCGTCT 401 TCGTCCCCGA AGGCAAATCG CTGACCGCCC
TTTTAAAAGA GTTCCGCGAA 451 CAGCGCAACC ATATGGCGAT TGTCATCGAC
GAATACGGCG GCACATCCGG 501 CTTGGTCACC TTTGAAGACA TCATCGAGCA
AATCGTCGGC GAAATCGAAG 551 ACGAGTTTGA CGAAGACGAT AGCGCCGACA
ATATCCATGC CGTTTCTTCm 601 GaACGcTGGC GCATCCATGC AGCTACCGAA
ATCGAAGACA TCAACACCTT 651 CTTCGGCACG GAATACAGCA kCGAAGAAGC
CGACACCATT GGCGGCCTGG 701 TCATTCAAGA GTTGGGACAT CTGCCCGTGC
GCGGCGAAAA AGTCCTTATC 751 GGCGGTTTGC AGTTCACCGT CGCACGCGCC
GACAACCGCC GCCTGCATAC 801 GCTGATGGCG ACCCGCGTGA AGTAA
This corresponds to the amino acid sequence <SEQ ID 2952; ORF
973>:
TABLE-US-03466 m973.pep 1 MDGAQPKTNF FERLIARLAR EPDSAEDVLN
LLRQAHEQEV FDADTLLRLE 51 KVLDFSDLEV RDAMITRSRM NVLKENDSIE
RITAYVIDTA HSRFPVIGED 101 KDEVLGILHA KDLLKYMFNP EQFHLKSILR
PAVFVPEGKS LTALLKEFRE 151 QRNHMAIVID EYGGTSGLVT FEDIIEQIVG
EIEDEFDEDD SADNIHAVSS 201 ERWRIHAATE IEDINTFFGT EYSXEEADTI
GGLVIQELGH LPVRGEKVLI 251 GGLQFTVARA DNRRLHTLMA TRVK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 973
shows 95.6% identity over a 274 aa overlap with a predicted ORF
(ORF 973.ng) from N. gonorrhoeae:
TABLE-US-03467 m973/g973 10 20 30 40 50 60 m973.pep
MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEV
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||::||| g973
MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDADTLTRLEKVLDFAELEV 10 20
30 40 50 60 70 80 90 100 110 120 m973.pep
RDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g973
RDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP 70 80
90 100 110 120 130 140 150 160 170 180 m973.pep
EQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVG
|||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||| g973
EQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGISGLVTFEDIIEQIVG 130
140 150 160 170 180 190 200 210 220 230 240 m973.pep
EIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFFGTEYSXEEADTIGGLVIQELGH
:||||||||:|||:||:||:|||||||||||||||:||||||: |||||||||||||||| g973
DIEDEFDEDESADDIHSVSAERWRIHAATEIEDINAFFGTEYGSEEADTIGGLVIQELGH 190
200 210 220 230 240 250 260 270 m973.pep
LPVRGEKVLIGGLQFTVARADNRRLHTLMATRVKX
||||||||||||||||||||||||||||||||||| g973
LPVRGEKVLIGGLQFTVARADNRRLHTLMATRVKX 250 260 270
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2953>:
TABLE-US-03468 a973.seq 1 ATGGACGGCG CACAACCGAA AACAAATTTT
TTTGAACGCC TGATTGCCCG 51 ACTCGCCCGC GAACCCGATT CCGCCGAAGA
CGTATTGACC CTGTTGCGCC 101 AAGCGCACGA ACAGGAAGTA TTTGATGCGG
ATACGCTTTT AAGATTGGAA 151 AAAGTCCTCG ATTTTTCTGA TTTGGAAGTG
CGCGACGCGA TGATTACGCG 201 CAGCCGTATG AACGTTTTAA AAGAAAACGA
CAGCATCGAA CGCATCACCG 251 CCTACGTTAT CGATACCGCC CATTCGCGCT
TCCCCGTCAT CGGTGAAGAC 301 AAAGACGAAG TTTTGGGTAT TTTGCACGCC
AAAGACCTGC TCAAATATAT 351 GTTCAACCCC GAGCAGTTCC ACCTCAAATC
GATATTGCGC CCTGCCGTCT 401 TCGTCCCCGA AGGCAAATCG CTGACCGCCC
TTTTAAAAGA GTTCCGCGAA 451 CAGCGCAACC ATATGGCAAT CGTCATCGAC
GAATACGGCG GCACGTCGGG 501 TTTGGTAACT TTTGAAGACA TCATCGAGCA
AATCGTCGGC GACATCGAAG 551 ATGAGTTTGA CGAAGACGAA AGCGCGGACA
ACATCCACGC CGTTTCCGCC 601 GAACGCTGGC GCATCCACGC GGCTACCGAA
ATCGAAGACA TCAACGCCTT 651 TTTCGGCACG GAATACAGCA GCGAAGAAGC
CGACACCATC GGCGGCCTGG 701 TCATTCAGGA ATTGGGACAC CTGCCCGTGC
GCGGCGAAAA AGTCCTTATC 751 GGCGGTTTGC AGTTCACCGT CGCCCGCGCC
GACAACCGCC GCCTGCATAC 801 GCTGATGGCG ACCCGCGTGA AGTAA
This corresponds to the amino acid sequence <SEQ ID 2954; ORF
973.a>:
TABLE-US-03469 a973.pep 1 MDGAQPKTNF FERLIARLAR EPDSAEDVLT
LLRQAHEQEV FDADTLLRLE 51 KVLDFSDLEV RDAMITRSRM NVLKENDSIE
RITAYVIDTA HSRFPVIGED 101 KDEVLGILHA KDLLKYMFNP EQFHLKSILR
PAVFVPEGKS LTALLKEFRE 151 QRNHMAIVID EYGGTSGLVT FEDIIEQIVG
DIEDEFDEDE SADNIHAVSA 201 ERWRIHAATE IEDINAFFGT EYSSEEADTI
GGLVIQELGH LPVRGEKVLI 251 GGLQFTVARA DNRRLHTLMA TRVK* m973/a973
97.8% identity in 274 aa overlap 10 20 30 40 50 60 m973.pep
MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEV
|||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||| a973
MDGAQPKTNFFERLIARLAREPDSAEDVLTLLRQAHEQEVFDADTLLRLEKVLDFSDLEV 10 20
30 40 50 60 70 80 90 100 110 120 m973.pep
RDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a973
RDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP 70 80
90 100 110 120 130 140 150 160 170 180 m973.pep
EQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a973
EQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGISGLVTFEDIIEQIVG 130
140 150 160 170 180 190 200 210 220 230 240 m973.pep
EIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFFGTEYSXEEADTIGGLVIQELGH
:||||||||:|||||||||:|||||||||||||||:||||||| |||||||||||||||| a973
DIEDEFDEDESADNIHAVSAERWRIHAATEIEDINAFFGTEYSSEEADTIGGLVIQELGH 190
200 210 220 230 240 250 260 270 m973.pep
LPVRGEKVLIGGLQFTVARADNRRLHTLMATRVKX
||||||||||||||||||||||||||||||||||| a973
LPVRGEKVLIGGLQFTVARADNRRLHTLMATRVKX 250 260 270
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2955>:
TABLE-US-03470 g981.seq 1 ATGAAAAAAT GGATTGCCGC CGCCCTTGCC
TGTTCCGCAC TCGCGCTGTC 51 TGCCTGCGGC GGTCAGGGCA AAGATGCCGC
CGCGCCTGCC GCCAACCCCG 101 GCAAAGTGTA CCGCGTGGCT TCCAACGCCG
AGTTTGCCCC CTTTGAATCT 151 TTAGACTCGA AAGGCAATGT CGAAGGTTTC
GACGTGGATT TGATGAACGC 201 GATGGCGAAG GCGGGCAATT TTAAAATCGA
ATTCAAACAC CAGCCGTGGG 251 ACAGCCTTTT CCCCGCCTTG AACAACGGCG
ATGCGGACGT TGTGATGTCG 301 GGCGTAACCA TTACCGACGA CCGCAAACAG
TCTATGGATT TCAGCGACCC 351 GTATTTTGAA ATCACCCAAG TCGTCCTCGT
TCCGAAAGGC AAAAAAGTAT 401 CTTCTTCCGA AGATTTGAAA AAGATGAACA
AAGTCGGCGT GGTTACCGGC 451 CACACGGGCG ATTTCTCCGT TTCCAAACTC
TTGGGCAACG ACAATCCGAA 501 AATCGCGCGC TTCGAAAACG TCCCCCTGAT
TATCAAAGAA CTGGAAAACG 551 GCGGCTTGGA TTCCGTGGTC AGCGACAGCG
CGGTCATCGC CAATTATGTG 601 AAAAACAACC CGGCCAAAGG AATGGACTTC
GTTACCCTGC CCGACTTCAC 651 CACCGAACAC TACGGCATCG CGGTACGCAA
AGGCGACGAA GCAACCGTCA 701 AAATGCTGAA CGATGCGTTG GAAAAAGTAC
GCGAAAGCGG CGAATACGAC 751 AAGATCTACG CCAAATATTT TGCCAAAGAG
GGCGGACAGG CTGCGAAATA 801 A
This corresponds to the amino acid sequence <SEQ ID 2956; ORF
981.ng>:
TABLE-US-03471 g981.pep 1 MKKWIAAALA CSALALSACG GQGKDAAAPA
ANPGKVYRVA SNAEFAPFES 51 LDSKGNVEGF DVDLMNAMAK AGNFKIEFKH
QPWDSLFPAL NNGDADVVMS 101 GVTITDDRKQ SMDFSDPYFE ITQVVLVPKG
KKVSSSEDLK KMNKVGVVTG 151 HTGDFSVSKL LGNDNPKIAR FENVPLIIKE
LENGGLDSVV SDSAVIANYV 201 KNNPAKGMDF VTLPDFTTEH YGIAVRKGDE
ATVKMLNDAL EKVRESGEYD 251 KIYAKYFAKE GGQAAK*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2957>:
TABLE-US-03472 m981.seq 1 ATGAAAAAAT GGATTGCCGC CGCCCTTGCC
TGTTCCGCGC TCGCGCTGTC 51 TGCCTGCGGC GGTCAGGGCA AAGATACCGC
CGCGCCTGCC GCCAACCCCG 101 ACAAAGTGTA CCGCGTGGCT TCCAACGCCG
AGTTTGCCCC CTTTGAATCT 151 TTAGACTCGA AAGGCAATGT CGAAGGTTTC
GATGTGGATT TGATGAACGC 201 GATGGCGAAG GCGGGCAATT TTAAAATCGA
ATTCAAACAC CAGCCGTGGG 251 ACAGCCTTTT CCCCGCCTTA AACAACGGCG
ATGCGGACGT TGTGATGTCG 301 GGCGTAACCA TTACCGACGA CCGCAAACAG
TCTATGGACT TCAGCGACCC 351 GTATTTTGAA ATCACCCAAG TCGTCCTCGT
TCCGAAAGGC AAAAAAGTAT 401 CTTCTTCCGA AGATTTGAAA AACATGAACA
AAGTCGGCGT GGTAACCGGC 451 TACACGGGCG ATTTCTCCGT ATCCAAACTC
TTGGGCAACG ACAATCCGAA 501 AATCGCGCGC TTTGAAAACG TTCCCCTGAT
TATCAAAGAA CTGGAAAACG 551 GCGGCTTGGA TTCCGTGGTC AGCGACAGCG
CGGTCATCGC CAATTATGTG 601 AAAAACAATC CGGCCAAAGG GATGGACTTC
GTTACCCTGC CCGACTTCAC 651 CACCGAACAC TACGGCATCG CGGTACGCAA
AGGCGACGAA GCAACCGTCA 701 AAATGCTGAA CGATGCGTTG GAAAAAGTAC
GCGAAAGCGG CGAATACGAC 751 AAGATTTACG CCAAATATTT TGCAAAAGAA
GACGGACAGG CCGCAAAATA 801 A
This corresponds to the amino acid sequence <SEQ ID 2958; ORF
981>:
TABLE-US-03473 m981.pep 1 MKKWIAAALA CSALALSACG GQGKDTAAPA
ANPDKVYRVA SNAEFAPFES 51 LDSKGNVEGF DVDLMNAMAK AGNFKIEFKH
QPWDSLFPAL NNGDADVVMS 101 GVTITDDRKQ SMDFSDPYFE ITQVVLVPKG
KKVSSSEDLK NMNKVGVVTG 151 YTGDFSVSKL LGNDNPKIAR FENVPLIIKE
LENGGLDSVV SDSAVIANYV 201 KNNPAKGMDF VTLPDFTTEH YGIAVRKGDE
ATVKMLNDAL EKVRESGEYD 251 KIYAKYFAKE DGQAAK* m981/g981 98.1%
identity in 266 aa overlap 10 20 30 40 50 60 981.pep
MKKWIAAALACSALALSACGGQGKDTAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF
|||||||||||||||||||||||||:||||||| |||||||||||||||||||||||||| g981
MKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGF 10 20
30 40 50 60 70 80 90 100 110 120 981.pep
DVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g981
DVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFE 70 80
90 100 110 120 130 140 150 160 170 180 981.pep
ITQVVLVPKGKKVSSSEDLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKE
||||||||||||||||||||:|||||||||:||||||||||||||||||||||||||||| g981
ITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVSKLLGNDNPKIARFENVPLIIKE 130
140 150 160 170 180 190 200 210 220 230 240 981.pep
LENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDAL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g981
LENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDAL 190
200 210 220 230 240 250 260 981.pep EKVRESGEYDKIYAKYFAKEDGQAAKX
|||||||||||||||||||| |||||| g981 EKVRESGEYDKIYAKYFAKEGGQAAKX 250
260
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2959>:
TABLE-US-03474 a981.seq 1 ATGAAAAAAT GGATTGCCGC CGCCCTTGCC
TGTTCCGCGC TCGCGCTGTC 51 TGCCTGCGGC GGTCAGGGTA AAGATGCCGC
CGCGCCCGCC GCAAATCCCG 101 ACAAAGTGTA CCGCGTGGCT TCCAACGCCG
AGTTTGCCCC CTTTGAATCT 151 TTAGACTCGA AAGGCAATGT CGAAGGTTTC
GATGTGGATT TGATGAACGC 201 GATGGCGAAG GCGGGCAATT TTAAAATCGA
ATTCAAACAC CAGCCGTGGG 251 ACAGCCTTTT CCCCGCCTTG AACAACGGCG
ATGCGGACGT TGTGATGTCG 301 GGCGTAACCA TTACCGACGA CCGCAAACAG
TCTATGGACT TCAGCGACCC 351 GTATTTTGAA ATCACCCAAG TCGTCCTCGT
TCCGAAAGGC AAAAAAATAT 401 CTTCTTCCGA AGATTTGAAA AACATGAACA
AAGTCGGCGT GGTAACCGGC 451 TACACGGGCG ATTTCTCCGT ATCCAAACTC
TTGGGCAACG ACAACCCGAA 501 AATCGCGCGC TTTGAAAACG TTCCCCTGAT
TATCAAAGAA CTGGAAAACG 551 GCGGCTTGGA TTCCGTGGTC AGCGACAGCG
CAGTCATCGC CAATTATGTG 601 AAAAACAATC CGACCAAAGG GATGGACTTC
GTTACCCTGC CCGACTTCAC 651 CACCGAACAC TACGGCATCG CGGTACGCAA
AGGCGACGAA GCAACCGTCA 701 AAATGCTGAA CGATGCGTTG AAAAAAGTAC
GCGAAAGCGG CGAATACGAC 751 AAAATCTACG CCAAATATTT TGCAAAAGAA
GACGGACAGG CCGCAAAATA 801 A
This corresponds to the amino acid sequence <SEQ ID 2960; ORF
981.a>:
TABLE-US-03475 a981.pep 1 MKKWIAAALA CSALALSACG GQGKDAAAPA
ANPDKVYRVA SNAEFAPFES 51 LDSKGNVEGF DVDLMNAMAK AGNFKIEFKH
QPWDSLFPAL NNGDADVVMS 101 GVTITDDRKQ SMDFSDPYFE ITQVVLVPKG
KKISSSEDLK NMNKVGVVTG 151 YTGDFSVSKL LGNDNPKIAR FENVPLIIKE
LENGGLDSVV SDSAVIANYV 201 KNNPTKGMDF VTLPDFTTEH YGIAVRKGDE
ATVKMLNDAL KKVRESGEYD 251 KIYAKYFAKE DGQAAK* m981/a981 98.5%
identity in 266 aa overlap 10 20 30 40 50 60 m981.pep
MKKWIAAALACSALALSACGGQGKDTAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF
|||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||| a981
MKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASNAEFAPFESLDSKGNVEGF 10 20
30 40 50 60 70 80 90 100 110 120 m981.pep
DVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFE
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a981
DVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFE 70 80
90 100 110 120 130 140 150 160 170 180 m981.pep
ITQVVLVPKGKKVSSSEDLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKE
||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||| a981
ITQVVLVPKGKKISSSEDLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKE 130
140 150 160 170 180 190 200 210 220 230 240 m981.pep
LENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDAL
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| a981
LENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDAL 190
200 210 220 230 240 250 260 m981.pep EKVRESGEYDKIYAKYFAKEDGQAAKX
:|||||||||||||||||||||||||| a981 KKVRESGEYDKIYAKYFAKEDGQAAKX 250
260
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2961>:
TABLE-US-03476 g982.seq 1 atcgcatcgc aaaaccttcg attcgacaat
cgattcctcc aaaaaatggt 51 caacggcgTg aatattttgc cggccgcCga
ttgggtagcC ttgGGcgcCA 101 AAGGCCGCAA CGTGGTGGTT GACCGCGCTT
TCGGCGGCCC GCACATCACC 151 AAAGACGGCG TAACCGTCGC CAAAGAAATC
GAACTGAAAG ACAAGTTTGA 201 AAATATGGGC GCGCAAATGG TAAAAGAAGT
CGCGTCCAAA ACCAAcgaCg 251 tagCCGgcga cggtacgact accgCCACCG
TATTGGCACA ATCCATCGTT 301 GCCGAAggcA TGAAATACGT TACCGCCGGC
ATGAACCCGA CCGATCTGAA 351 ACGCGGCATC GACAAAGccg ttgCCGCTtt
ggttgAAGAg cTGAAAAACA 401 TCGCCAAACC TTGCGATACT TCCAAAGAAA
TCGCCCAAGT CGGCTCGATT 451 TCCGCCAACT CCGACGAACA AGtcgGCGCG
ATTATCGCCG AAGCGATGGA 501 AAAAGTCGGC AAAGAAGgcg tgattacCGT
TGAAGACGGC AAATCTTTGG 551 AAAACGAGCT GGACGTGGTT GAAGGTATGC
AGTTCGACCG CGGCTACCTG 601 TCCCCTTACT TTATCAACGA CGCGGAAAAA
CAAATCGCCG GTCTGGACAA 651 TCCGTTTGTT TTGCTGTTCG ACAAAAAAAT
CAGCAACATC CGCGACCTGC 701 TGCCCGTGTT GGAACAAGTG GCGAAAGCCA
GCCGCCCGCT GTTGATTATC 751 GCTGAAGACG TAGAAGGCGA AGCCTTGGCG
ACTTTGGTCG TGAACAACAT 801 CCGCGGCATC CTGAAAACCG TTGCCGTCAA
AGCccccggc tTCGGcGACC 851 GCCGCAAAGC GATgctgcaa gaCATCGCCA
TCCTGACcgg cggcgTagtG 901 ATTtccGAAG Aagtcggcct GTCTTTGGAA
AAAgcgactT TGgacgaCTT 951 Gggtcaaacc aaACGcatCG AAATCGGtga
agaaaacact ACCGTCATcg 1001 acgGCTTCGG CGACGcagcC CAAAtcgaag
cgCGTGTTGC CGAAATCCGC 1051 CAACAAATCG AAACCGCGAC CAGCGATTAC
GACAAAGAAA AACTGCAAGA 1101 GCGCGTTGCC AAACTGGCAG GAGGCGTGGC
AGTGATCAAA GTCGGCGCGG 1151 CGACCGAAGT CGAAATGAAA GAGAAAAAAG
ACCGCGTGGA AGACGCGCTG 1201 CACGCTACCC GCGCAGCCGT TGAAGAAGGC
GTGGTTGCAG GCGGCGGCGT 1251 AGCCCTGTTG CGCGCCCGTG CCGCTTTGGA
AAACCTGCAC ACCGGCAATG 1301 CCGACCAAGA CGCAGGCGTA CAAATCGTAT
TGCGCGCCGT TGAGTCTCCG 1351 CTGCGCCAAA TCGTTGCCAA CGCAGGCGGA
GAACCCAGCG TGGTGGTGAA 1401 CAAAGTGTTG GAAGGCAAAG GCAactacgG
TTACAACGCa ggctcCGGCG 1451 AATACGgcga CATGATCGGA ATGGGCGTAC
TCGACCCTGC CAAAGTAACC 1501 CGTTCCGCGC TGCAACACGC CGCGTCTAtC
GCCGGTCTGA TGCTGACGAC 1551 CGACTGCATG ATTGCCGAAA TCCCTGAAGA
AAAACCGGCT GTGCCCGATA 1601 TGGGGGGAAT GGGCGGTATG GGCGGCATGA
TGTAA
This corresponds to the amino acid sequence <SEQ ID 2962; ORF
982.ng>:
TABLE-US-03477 g982.pep 1 IASQNLRFDN RFLQKMVNGV NILPAADWVA
LGAKGRNVVV DRAFGGPHIT 51 KDGVTVAKEI ELKDKFENMG AQMVKEVASK
TNDVAGDGTT TATVLAQSIV 101 AEGMKYVTAG MNPTDLKRGI DKAVAALVEE
LKNIAKPCDT SKEIAQVGSI 151 SANSDEQVGA IIAEAMEKVG KEGVITVEDG
KSLENELDVV EGMQFDRGYL 201 SPYFINDAEK QIAGLDNPFV LLFDKKISNI
RDLLPVLEQV AKASRPLLII 251 AEDVEGEALA TLVVNNIRGI LKTVAVKAPG
FGDRRKAMLQ DIAILTGGVV 301 ISEEVGLSLE KATLDDLGQT KRIEIGEENT
TVIDGFGDAA QIEARVAEIR 351 QQIETATSDY DKEKLQERVA KLAGGVAVIK
VGAATEVEMK EKKDRVEDAL 401 HATRAAVEEG VVAGGGVALL RARAALENLH
TGNADQDAGV QIVLRAVESP 451 LRQIVANAGG EPSVVVNKVL EGKGNYGYNA
GSGEYGDMIG MGVLDPAKVT 501 RSALQHAASI AGLMLTTDCM IAEIPEEKPA
VPDMGGMGGM GGMM*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2963>:
TABLE-US-03478 m982.seq 1 ATGGCAGCAA AAGACGTACA GTTCGGCAAT
GAAGTCCGTC AAAAAATGGT 51 AAACGGCGTG AACATTCTGG CAAACGCCGT
CCGCGTAACC TTGGGCCCCA 101 AAGGTCGCAA CGTAGTCGTT GACCGCGCAT
TCGGCGGCCC GCACATCACC 151 AAAGACGGCG TAACCGTCGC CAAAGAAATC
GAACTGAAAG ACAAGTTTGA 201 AAATATGGGC GCGCAAATGG TGAAAGAAGT
TGCGTCCAAA ACCAACGACG 251 TGGCAGGCGA CGGTACGACT ACCGCCACCG
TACTGGCGCA ATCCATCGTT 301 GCCGAAGGTA TGAAATATGT TACCGCAGGT
ATGAATCCGA CCGACCTGAA 351 ACGCGGTATC GATAAAGCCG TCGCCGCTTT
GGTTGACGAA CTGAAAAACA 401 TCGCCAAACC TTGCGACACT TCTAAAGAAA
TCGCCCAAGT CGGCTCTATT 451 TCCGCCAACT CCGACGAACA AGTCGGCGCG
ATTATCGCCG AAGCGATGGA 501 AAAAGTCGGC AAAGAAGGCG TGATTACCGT
TGAAGACGGC AAGTCTTTGG 551 AAAACGAGCT GGACGTAGTT GAAGGTATGC
AGTTCGACCG CGGCTACCTG 601 TCTCCTTACT TCATCAACGA TGCGGAAAAA
CAAATCGCTG CTTTGGACAA 651 TCCGTTTGTA TTGTTGTTCG ACAAAAAAAT
CAGCAACATC CGCGACCTGC 701 TGCCTGTTTT GGAACAAGTG GCAAAAGCCA
GCCGTCCGCT GTTGATTATC 751 GCTGAAGACG TAGAAGGCGA AGCCTTGGCG
ACTTTGGTCG TGAACAACAT 801 CCGAGGCATC CTGAAAACCG TTGCCGTCAA
AGCCCCTGGC TTCGGCGACC 851 GCCGCAAAGC GATGTTGCAA GACATCGCCA
TCCTGACCGG CGGCGTGGTG 901 ATTTCCGAAG AAGTCGGTCT GTCTTTGGAA
AAAGCGACTT TGGACGACTT 951 GGGTCAAGCC AAACGCATCG AAATCGGTAA
AGAAAACACC ACCATCATCG 1001 ACGGCTTTGG CGACGCAGCC CAAATCGAAG
CGCGTGTTGC CGAAATCCGC 1051 CAACAAATCG AAACCGCAAC CAGCGATTAC
GACAAAGAAA AACTGCAAGA 1101 GCGCGTGGCT AAATTGGCAG GCGGCGTGGC
AGTCATCAAA GTCGGTGCCG 1151 CGACCGAAGT CGAAATGAAA GAGAAAAAAG
ACCGCGTGGA AGACGCGCTG 1201 CACGCTACCC GCGCAGCCGT TGAAGAAGGC
GTGGTTGCAG GCGGCGGCGT 1251 AGCCCTGTTG CGTGCCCGTG CTGCTTTGGA
AAACCTGCAC ACCGGCAATG 1301 CCGACCAAGA CGCAGGCGTA CAAATCGTCT
TGCGCGCCGT TGAGTCTCCG 1351 CTGCGCCAAA TCGTTGCCAA CGCAGGCGGC
GAACCCAGCG TGGTTGTGAA 1401 CAAAGTATTG GAAGGCAAAG GCAACTACGG
TTACAACGCT GGCAGCGGCG 1451 AATACGGCGA TATGATCGAA ATGGGCGTAC
TCGACCCCGC CAAAGTAACC 1501 CGTTCTGCGC TGCAACACGC CGCATCTATC
GCCGGCTTGA TGCTGACCAC 1551 TGATTGCATG ATCGCTGAAA TCCCCGAAGA
CAAACCGGCT GTGCCTGATA 1601 TGGGCGGCAT GGGTGGTATG GGCGGCATGA
TGTAA
This corresponds to the amino acid sequence <SEQ ID 2964; ORF
982>:
TABLE-US-03479 m982.seq 1 ATGGCAGCAA AAGACGTACA GTTCGGCAAT
GAAGTCCGTC AAAAAATGGT 51 AAACGGCGTG AACATTCTGG CAAACGCCGT
CCGCGTAACC TTGGGCCCCA 101 AAGGTCGCAA CGTAGTCGTT GACCGCGCAT
TCGGCGGCCC GCACATCACC 151 AAAGACGGCG TAACCGTCGC CAAAGAAATC
GAACTGAAAG ACAAGTTTGA 201 AAATATGGGC GCGCAAATGG TGAAAGAAGT
TGCGTCCAAA ACCAACGACG 251 TGGCAGGCGA CGGTACGACT ACCGCCACCG
TACTGGCGCA ATCCATCGTT 301 GCCGAAGGTA TGAAATATGT TACCGCAGGT
ATGAATCCGA CCGACCTGAA 351 ACGCGGTATC GATAAAGCCG TCGCCGCTTT
GGTTGACGAA CTGAAAAACA 401 TCGCCAAACC TTGCGACACT TCTAAAGAAA
TCGCCCAAGT CGGCTCTATT 451 TCCGCCAACT CCGACGAACA AGTCGGCGCG
ATTATCGCCG AAGCGATGGA 501 AAAAGTCGGC AAAGAAGGCG TGATTACCGT
TGAAGACGGC AAGTCTTTGG 551 AAAACGAGCT GGACGTAGTT GAAGGTATGC
AGTTCGACCG CGGCTACCTG 601 TCTCCTTACT TCATCAACGA TGCGGAAAAA
CAAATCGCTG CTTTGGACAA 651 TCCGTTTGTA TTGTTGTTCG ACAAAAAAAT
CAGCAACATC CGCGACCTGC 701 TGCCTGTTTT GGAACAAGTG GCAAAAGCCA
GCCGTCCGCT GTTGATTATC 751 GCTGAAGACG TAGAAGGCGA AGCCTTGGCG
ACTTTGGTCG TGAACAACAT 801 CCGAGGCATC CTGAAAACCG TTGCCGTCAA
AGCCCCTGGC TTCGGCGACC 851 GCCGCAAAGC GATGTTGCAA GACATCGCCA
TCCTGACCGG CGGCGTGGTG 901 ATTTCCGAAG AAGTCGGTCT GTCTTTGGAA
AAAGCGACTT TGGACGACTT 951 GGGTCAAGCC AAACGCATCG AAATCGGTAA
AGAAAACACC ACCATCATCG 1001 ACGGCTTTGG CGACGCAGCC CAAATCGAAG
CGCGTGTTGC CGAAATCCGC 1051 CAACAAATCG AAACCGCAAC CAGCGATTAC
GACAAAGAAA AACTGCAAGA 1101 GCGCGTGGCT AAATTGGCAG GCGGCGTGGC
AGTCATCAAA GTCGGTGCCG 1151 CGACCGAAGT CGAAATGAAA GAGAAAAAAG
ACCGCGTGGA AGACGCGCTG 1201 CACGCTACCC GCGCAGCCGT TGAAGAAGGC
GTGGTTGCAG GCGGCGGCGT 1251 AGCCCTGTTG CGTGCCCGTG CTGCTTTGGA
AAACCTGCAC ACCGGCAATG 1301 CCGACCAAGA CGCAGGCGTA CAAATCGTCT
TGCGCGCCGT TGAGTCTCCG 1351 CTGCGCCAAA TCGTTGCCAA CGCAGGCGGC
GAACCCAGCG TGGTTGTGAA 1401 CAAAGTATTG GAAGGCAAAG GCAACTACGG
TTACAACGCT GGCAGCGGCG 1451 AATACGGCGA TATGATCGAA ATGGGCGTAC
TCGACCCCGC CAAAGTAACC 1501 CGTTCTGCGC TGCAACACGC CGCATCTATC
GCCGGCTTGA TGCTGACCAC 1551 TGATTGCATG ATCGCTGAAA TCCCCGAAGA
CAAACCGGCT GTGCCTGATA 1601 TGGGCGGCAT GGGTGGTATG GGCGGCATGA
TGTAA
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-03480 m982/g982 95.8% identity in 544 aa overlap 10 20 30
40 50 60 m982.pep
MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEI
:|:::::| |: |||||||||| | |:|| ||||||||||||||||||||||||||| g982
IASQNLRFDNRFLQKMVNGVNILPAADWVALGAKGRNVVVDRAFGGPHITKDGVTVAKEI 10 20
30 40 50 60 70 80 90 100 110 120 m982.pep
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g982
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI 70 80
90 100 110 120 130 140 150 160 170 180 m982.pep
DKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| g982
DKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG 130
140 150 160 170 180 190 200 210 220 230 240 m982.pep
KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNPFVLLFDKKISNIRDLLPVLEQV
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| g982
KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNPFVLLFDKKISNIRDLLPVLEQV 190
200 210 220 230 240 250 260 270 280 290 300 m982.pep
AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGVV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g982
AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGVV 250
260 270 280 290 300 310 320 330 340 350 360 m982.pep
ISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDY
|||||||||||||||||||:||||||:||||:|||||||||||||||||||||||||||| g982
ISEEVGLSLEKAILDDLGQTKRIEIGEENTIVIDGFGDAAQIEARVAEIRQQIETATSDY 310
320 330 340 350 360 370 380 390 400 410 420 m982.pep
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g982
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL 370
380 390 400 410 420 430 440 450 460 470 480 m982.pep
RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g982
RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA 430
440 450 460 470 480 490 500 510 520 530 540 m982.pep
GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGM
||||||||| ||||||||||||||||||||||||||||||||||||:||||||||||||| g982
GSGEYGDMIGMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGM 490
500 510 520 530 540 m982.pep GGMMX ||||| g982 GGMMX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2965>:
TABLE-US-03481 a982.seq 1 ATGGCAGCAA AAGACGTACA ATTCGGCAAT
GAAGTCCGCC AAAAAATGGT 51 AAACGGCGTG AACATTTTGG CAAACGCCGT
GCGCGTAACC TTGGGTCCCA 101 AAGGCCGCAA CGTGGTGGTT GACCGCGCTT
TCGGCGGCCC GCACATCACC 151 AAAGACGGCG TAACCGTCGC CAAAGAAATC
GAACTGAAAG ACAAGTTTGA 201 AAATATGGGC GCGCAAATGG TGAAAGAAGT
CGCGTCCAAA ACCAACGACG 251 TGGCGGGCGA CGGTACGACT ACCGCCACCG
TATTGGCGCA ATCCATCGTT 301 GCCGAAGGTA TGAAATACGT TACCGCCGGT
ATGAACCCGA CCGACCTGAA 351 ACGCGGTATC GACAAAGCCG TCGCCGCTTT
GGTTGAAGAG CTGAAAAACA 401 TCGCCAAACC TTGCGACACT TCTAAAGAAA
TCGCCCAAGT CGGCTCTATT 451 TCCGCCAACT CTGACGAACA AGTCGGCGCG
ATTATTGCCG AAGCGATGGA 501 AAAAGTCGGC AAAGAAGGCG TGATTACCGT
TGAAGACGGC AAATCTTTGG 551 AAAACGAGCT GGACGTGGTT GAAGGTATGC
AATTCGACCG CGGCTACCTG 601 TCTCCTTACT TCATCAACGA TGCGGAAAAA
CAAATCGCCG GCTTGGACAA 651 TCCGTTTGTA TTGCTGTTCG ACAAAAAAAT
CAGCAATATC CGCGACCTGC 701 TGCCTGTTTT GGAACAAGTG GCCAAAGCCA
GCCGTCCGCT GTTGATTATC 751 GCTGAAGACG TAGAAGGCGA AGCCTTGGCG
ACTTTGGTCG TGAACAACAT 801 CCGCGGCATT CTGAAAACCG TTGCCGTTAA
AGCTCCGGGC TTCGGCGACC 851 GCCGCAAAGC GATGCTGCAA GACATCGCTA
TCCTGACCGG CGGCACAGTG 901 ATTTCCGAAG AAGTCGGCCT GTCTTTGGAA
AAAGCGACTT TGGACGACTT 951 GGGTCAGGCC AAACGCATCG AAATCGGTAA
AGAAAACACC ACCATCATCG 1001 ACGGCTTCGG CGACGCAGCC CAAATCGAAG
CGCGTGTTGC CGAAATCCGC 1051 CAACAAATCG AAACCGCAAC CAGCGATTAC
GACAAAGAAA AACTGCAAGA 1101 GCGCGTTGCC AAACTGGCAG GCGGCGTGGC
AGTAATCAAA GTCGGTGCCG 1151 CGACCGAAGT GGAAATGAAA GAGAAAAAAG
ACCGCGTGGA AGACGCGCTG 1201 CACGCTACCC GCGCAGCCGT TGAAGAAGGC
GTGGTTGCAG GCGGCGGCGT 1251 AGCCCTGTTG CGCGCCCGTG CCGCTCTGGA
AAACCTGCAC ACCGGCAATG 1301 CAGACCAAGA CGCAGGCGTA CAAATCGTCT
TGCGCGCCGT TGAGTCTCCG 1351 CTGCGCCAAA TCGTTGCCAA CGCAGGCGGC
GAACCCAGCG TGGTTGTGAA 1401 CAAAGTGTTG GAAGGCAAAG GCAACTATGG
TTACAACGCT GGCAGCGGCG 1451 AATACGGCGA CATGATCGAA ATGGGCGTAC
TCGACCCCGC CAAAGTAACC 1501 CGTTCCGCGC TGCAACACGC CGCGTCTATC
GCCGGCCTGA TGCTGACCAC 1551 AGACTGCATG ATTGCTGAAA TCCCTGAAGA
CAAACCGGCT ATGCCTGATA 1601 TGGGCGGCAT GGGTGGTATG GGCGGCATGA
TGTAA
This corresponds to the amino acid sequence <SEQ ID 2966; ORF
982.a>:
TABLE-US-03482 a982.pep 1 MAAKDVQFGN EVRQKMVNGV NILANAVRVT
LGPKGRNVVV DRAFGGPHIT 51 KDGVTVAKEI ELKDKFENMG AQMVKEVASK
TNDVAGDGTT TATVLAQSIV 101 AEGMKYVTAG MNPTDLKRGI DKAVAALVEE
LKNIAKPCDT SKEIAQVGSI 151 SANSDEQVGA IIAEAMEKVG KEGVITVEDG
KSLENELDVV EGMQFDRGYL 201 SPYFINDAEK QIAGLDNPFV LLFDKKISNI
RDLLPVLEQV AKASRPLLII 251 AEDVEGEALA TLVVNNIRGI LKTVAVKAPG
FGDRRKAMLQ DIAILTGGTV 301 ISEEVGLSLE KATLDDLGQA KRIEIGKENT
TIIDGFGDAA QIEARVAEIR 351 QQIETATSDY DKEKLQERVA KLAGGVAVIK
VGAATEVEMK EKKDRVEDAL 401 HATRAAVEEG VVAGGGVALL RARAALENLH
TGNADQDAGV QIVLRAVESP 451 LRQIVANAGG EPSVVVNKVL EGKGNYGYNA
GSGEYGDMIE MGVLDPAKVT 501 RSALQHAASI AGLMLTTDCM IAEIPEDKPA
MPDMGGMGGM GGMM* m982/a982 99.3% identity in 544 aa overlap 10 20
30 40 50 60 m982.pep
MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a982
MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEI 10 20
30 40 50 60 70 80 90 100 110 120 m982.pep
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a982
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI 70 80
90 100 110 120 130 140 150 160 170 180 m982.pep
DKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG
||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||| a982
DKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG 130
140 150 160 170 180 190 200 210 220 230 240 m982.pep
KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNPFVLLFDKKISNIRDLLPVLEQV
|||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||| a982
KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNPFVLLFDKKISNIRDLLPVLEQV 190
200 210 220 230 240 250 260 270 280 290 300 m982.pep
AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGVV
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:| a982
AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTV 250
260 270 280 290 300 310 320 330 340 350 360 m982.pep
ISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a982
ISEEVGLSLEKAILDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDY 310
320 330 340 350 360 370 380 390 400 410 420 m982.pep
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a982
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL 370
380 390 400 410 420 430 440 450 460 470 480 m982.pep
RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a982
RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA 430
440 450 460 470 480 490 500 510 520 530 540 m982.pep
GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGM
||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||| a982
GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGM 490
500 510 520 530 540 m982.pep GGMMX ||||| a982 GGMMX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2967>:
TABLE-US-03483 g986.seq 1 GTGTTCAAAA AATACCAATA CTTCGCTTTG
GCGGCACTGT GTGCCGCCTT 51 GCTGGCAGGC TGCGAAAAGG CAGGCAGCTT
TTTCGGTGCG GACAAAAAAG 101 AAGCATCCTT CGTAGAACGC ATCGAACACA
CCAAAGACGA CGGCAGTGTC 151 AGTATGCTGC TGCCCGACTT TGCCCAACTG
GTTCAAAGCG AAGGCCCGGC 201 AGTCGTCAAT ATTCAGGCAG CCCCCGCCCC
GCGCACCCAA AACGGCAGCG 251 GCAATGCCGA AACCGATTCC GACCCGCTTG
CCGACAGCGA CCCGTTCTAC 301 GAATTTTTCA AACGCCTCGT CCCGAACATG
CCCGAAATCC CCCAAGAAGA 351 AGCAGATGAC GGCGGATTGA ACTTCGGTTC
GGGCTTCATC ATCAGCAAAA 401 ACGGCTACAT CCTGACCAAT ACCCACGTCG
TTGCCGGTAT GGGCAGTATC 451 AAAGTCCTGC TCAACGACAA GCGCGAATAT
ACCGCCAAAC TCATCGGTTC 501 GGATGTCCAA TCCGATGTCG CCCTTCTGAA
AATCGACGCA ACGGAAGAGC 551 TACCCGTCGT CAAAATCGGC AATCCCAAAA
ATTTGAAACC GGGCGAATGG 601 GTCGCTGCCA TCGGCGCGCC CTTCGGCTTT
GACAACAGCG TGACCGCCGG 651 CATCGTGTCC GCCAAAGGCA GAAGCCTGCC
CAACGAAAgc tACACACCCT 701 TCATCCAAAC CGACGTTGCC ATCAATCCGG
GCAATTCCGG CGGCCCGCTG 751 TTCAACTTAA AAGGACAGGt cgTCGGCATC
AATTCGCAAA TATACAGCCG 801 CAGCGgcgga ttCATGGGCA TCTCCTTTGC
CATCCCGATT GACGTTGCCA 851 TGAATGTCGC CGAACAGCTG AAAAACACCG
GCAAAGTCCA ACGCGGACAA 901 CTGGGCGTGA TTATTCAGGA AGTATCCTAC
GGTTTGGCAC AGTCGTTCGG 951 TCTGGATAAA GCCAGCGGCG CATTGATTGC
CAAAATCCTT CCCGGCAGCC 1001 CCGCAGAACG TGCCGGCCTG CAGGCGGGCG
ACATCGTCCT CAGCCTCGAC 1051 GGCGGAGAAA TACGTTCTTC CGGCGACCTT
CCCGTCATGG TCGGCGCCAT 1101 TACGCCGGGA AAAGAAGTCA GCCTCGGCGT
ATGGCGCAAA GGCGAAGAAA 1151 TCACAATCAA AGCCAAGCTG GGCAACGCCg
ccgagcATAC CGGCgcatCA 1201 TCCAAAACAG ATGAAgcccc ctacaccgAA
CAGCAATCCG GTACGTTCTC 1251 GGTCGAATCC GCAGGCATTA CCCTTCAGAC
ACATACCGAC AGCAGCGGca 1301 aacacctcgt cgtcgtacgg gtttccgacg
cggcagaacg cGCAGGCTTA 1351 AGgcgcggcg acgaaatcct cgcggtcggg
caagtccccg tcaatgacga 1401 agccgGTTTC cgcaaaGCTA TGGACAAGGC
AGGCAAAAAC GTCCCCCTGC 1451 TGGTCAtgcg ccgTGGCAAC ACGCTGTTCA
TCGCATTAAA CCTGCAATAA
This corresponds to the amino acid sequence <SEQ ID 2968; ORF
986.ng>:
TABLE-US-03484 g986.pep 1 VFKKYQYFAL AALCAALLAG CEKAGSFFGA
DKKEASFVER IEHTKDDGSV 51 SMLLPDFAQL VQSEGPAVVN IQAAPAPRTQ
NGSGNAETDS DPLADSDPFY 101 EFFKRLVPNM PEIPQEEADD GGLNFGSGFI
ISKNGYILTN THVVAGMGSI 151 KVLLNDKREY TAKLIGSDVQ SDVALLKIDA
TEELPVVKIG NPKNLKPGEW 201 VAAIGAPFGF DNSVTAGIVS AKGRSLPNES
YTPFIQTDVA INPGNSGGPL 251 FNLKGQVVGI NSQIYSRSGG FMGISFAIPI
DVAMNVAEQL KNTGKVQRGQ 301 LGVIIQEVSY GLAQSFGLDK ASGALIAKIL
PGSPAERAGL QAGDIVLSLD 351 GGEIRSSGDL PVMVGAITPG KEVSLGVWRK
GEEITIKAKL GNAAEHTGAS 401 SKTDEAPYTE QQSGTFSVES AGITLQTHTD
SSGKHLVVVR VSDAAERAGL 451 RRGDEILAVG QVPVNDEAGF RKAMDKAGKN
VPLLVMRRGN TLFIALNLQ*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2969>:
TABLE-US-03485 m986.seq 1 GTGTTCAAAA AATACCAATA CCTCGCTTTG
GCAGCACTGT GTGCAGCCTC 51 GCTGGCAGGC TGCGACAAGG CAGGCAGCTT
CTTCGTGGCG GACAAAAAAG 101 AAGCATCCTT CGTAGAACGC ATCGAACACA
CCAAAGACGA CGGCAGCGTC 151 AGTATGCTGC TGCCCGACTT TGCCCAACTG
GTTCAAAGTG AAGGTCCGGC 201 AGTCGTCAAT ATTCAGGCAG CCCCCGCCCC
GCGCACCCAA AACGGCAGCG 251 GCAATGCCGA AAACGATTCC GACCCGATTG
CCGACAACGA CCCGTTCTAC 301 GAATTTTTCA AACGCCTCGT CCCGAATATG
CCCGAAATCC CCCAAGAAGA 351 AGCAGATGAC GGCGGATTGA ACTTCGGTTC
GGGCTTCATC ATCAGCAAAG 401 ACGGCTACAT CCTGACCAAT ACCCACGTCG
TTACCGGCAT GGGCAGTATC 451 AAAGTCCTGC TCAACGACAA GCGCGAATAT
ACCGCCAAAC TCATCGGTTC 501 GGATGTCCAA TCCGATGTCG CCCTTCTGAA
AATCGACGCA ACGGAAGAGC 551 TGCCCGTCGT CAAAATCGGC AATCCCAAAG
ATTTGAAACC GGGCGAATGG 601 GTCGCCGCCA TCGGCGCGCC CTTCGGCTTC
GACAACAGCG TGACCGCCGG 651 CATCGTGTCC GCCAAAGGCA GAAGCCTGCC
CAACGAAAGC TACACACCCT 701 TCATCCAAAC CGACGTTGCC ATCAATCCGG
GCAACTCCGG CGGCCCGCTG 751 TTCAACTTAA AAGGACAGGT CGTCGGCATC
AACTCGCAAA TATACAGCCG 801 CAGCGGCGGA TTCATGGGCA TTTCCTTCGC
CATCCCGATT GACGTTGCCA 851 TGAATGTCGC CGAACAGCTG AAAAACACCG
GCAAAGTCCA ACGCGGACAA 901 CTGGGCGTGA TTATTCAAGA AGTATCCTAC
GGTTTGGCAC AATCGTTCGG 951 TTTGGACAAA GCCGGCGGCG CACTGATTGC
CAAAATCCTG CCCGGCAGCC 1001 CCGCAGAACG TGCCGGCCTG CAGGCGGGCG
ACATCGTCCT CAGCCTCGAC 1051 GGCGGAGAAA TACGTTCTTC CGGCGACCTT
CCCGTTATGG TCGGCGCCAT 1101 TACGCCGGGA AAAGAAGTCA GCCTCGGCGT
ATGGCGCAAA GGCGAAGAAA 1151 TCACAATCAA AGTCAAGCTG GGCAACGCCG
CCGAGCATAT CGGCGCATCA 1201 TCCAAAACAG ATGAAGCCCC CTACACCGAA
CAGCAATCCG GTACGTTCTC 1251 GGTCGAATCC GCAGGCATTA CCCTTCAGAC
ACATACCGAC AGCAGCGGCG 1301 GACACCTCGT CGTCGTACGG GTTTCCGACG
CGGCAGAACG CGCAGGCTTG 1351 AGGCGCGGCG ACGAAATTCT TGCCGTCGGG
CAAGTCCCCG TCAATGACGA 1401 AGCCGGTTTC CGCAAAGCTA TGGACAAGGC
AGGCAAAAAC GTCCCCCTGC 1451 TGATCATGCG CCGTGGCAAC ACGCTGTTTA
TCGCATTAAA CCTGCAATAA
This corresponds to the amino acid sequence <SEQ ID 2970; ORF
986>:
TABLE-US-03486 m986.pep.. 1 VFKKYQYLAL AALCAASLAG CDKAGSFFVA
DKKEASFVER IEHTKDDGSV 51 SMLLPDFAQL VQSEGPAVVN IQAAPAPRTQ
NGSGNAENDS DPIADNDPFY 101 EFFKRLVPNM PEIPQEEADD GGLNFGSGFI
ISKDGYILTN THVVTGMGSI 151 KVLLNDKREY TAKLIGSDVQ SDVALLKIDA
TEELPVVKIG NPKDLKPGEW 201 VAAIGAPFGF DNSVTAGIVS AKGRSLPNES
YTPFIQTDVA INPGNSGGPL 251 FNLKGQVVGI NSQIYSRSGG FMGISFAIPI
DVAMNVAEQL KNTGKVQRGQ 301 LGVIIQEVSY GLAQSFGLDK AGGALIAKIL
PGSPAERAGL QAGDIVLSLD 351 GGEIRSSGDL PVMVGAITPG KEVSLGVWRK
GEEITIKVKL GNAAEHIGAS 401 SKTDEAPYTE QQSGTFSVES AGITLQTHTD
SSGGHLVVVR VSDAAERAGL 451 RRGDEILAVG QVPVNDEAGF RKAMDKAGKN
VPLLIMRRGN TLFIALNLQ*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-03487 m986/g986 97.0% identity in 499 aa overlap 10 20 30
40 50 60 m986.pep
VFKKYQYLALAALCAASLAGCDKAGSFFVADKKEASFVERIEHTKDDGSVSMLLPDFAQL
|||||||:|||||||| ||||:|||||| ||||||||||||||||||||||||||||||| g986
VFKKYQYFALAALCAALLAGCEKAGSFFGADKKEASFVERIEHTKDDGSVSMLLPDFAQL 10 20
30 40 50 60 70 80 90 100 110 120 m986.pep
VQSEGPAVVNIQAAPAPRTQNGSGNAENDSDPIADNDPFYEFFKRLVPNMPEIPQEEADD
|||||||||||||||||||||||||||:||||:||:|||||||||||||||||||||||| g986
VQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEFFKRLVPNMPEIPQEEADD 70 80
90 100 110 120 130 140 150 160 170 180 m986.pep
GGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREYTAKLIGSDVQSDVALLKIDA
|||||||||||||:||||||||||:||||||||||||||||||||||||||||||||||| g986
GGLNFGSGFIISKNGYILTNTHVVAGMGSIKVLLNDKREYTAKLIGSDVQSDVALLKIDA 130
140 150 160 170 180 190 200 210 220 230 240 m986.pep
TEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGIVSAKGRSLPNESYTPFIQTDVA
|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||| g986
TEELPVVKIGNPKNLKPGEWVAAIGAPFGFDNSVTAGIVSAKGRSLPNESYTPFIQTDVA 190
200 210 220 230 240 250 260 270 280 290 300 m986.pep
INPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQRGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g986
INPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQRGQ 250
260 270 280 290 300 310 320 330 340 350 360 m986.pep
LGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRSSGDL
|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| g986
LGVIIQEVSYGLAQSFGLDKASGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRSSGDL 310
320 330 340 350 360 370 380 390 400 410 420 m986.pep
PVMVGAITPGKEVSLGVWRKGEEITIKVKLGNAAEHIGASSKTDEAPYTEQQSGTFSVES
|||||||||||||||||||||||||||:|||||||| ||||||||||||||||||||||| g986
PVMVGAITPGKEVSLGVWRKGEEITIKAKLGNAAEHTGASSKTDEAPYTEQQSGTFSVES 370
380 390 400 410 420 430 440 450 460 470 480 m986.pep
AGITLQTHTDSSGGHLVVVRVSDAAERAGLRRGDEILAVGQVPVNDEAGFRKAMDKAGKN
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| g986
AGITLQTHTDSSGKHLVVVRVSDAAERAGLRRGDEILAVGQVPVNDEAGFRKAMDKAGKN 430
440 450 460 470 480 490 500 m986.pep VPLLIMRRGNTLFIALNLQX
||||:||||||||||||||| g986 VPLLIMRRGNTLFIALNLQX 490 500
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2971>:
TABLE-US-03488 a986.seq 1 GTGTTCAAAA AATACCAATA CCTCGCTTTG
GCAGCACTGT GTGCCGCCTC 51 GCTGGCAGGC TGCGACAAAG CCGGCAGCTT
TTTCGGTGCG GACAAAAAAG 101 AAGCATCCTT TGTAGAACGC ATCAAACACA
CCAAAGACGA CGGCAGCGTC 151 AGTATGCTGC TGCCCGACTT TGTCCAACTG
GTTCAAAGCG AAGGCCCGGC 201 AGTCGTCAAT ATTCAGGCAG CCCCCGCCCC
GCGCACCCAA AACGGCAGCA 251 GCAATGCCGA AACCGATTCC GACCCGCTTG
CCGACAGCGA CCCGTTCTAC 301 GAATTTTTCA AACGCCTCGT CCCGAACATG
CCCGAAATCC CCCAAGAAGA 351 AGCAGATGAC GGNGGATTGA ACTTCGGTTC
GGGCTTCATC ATCAGCAAAG 401 ACGGCTATAT TCTGACCAAT ACGCACGTCG
TTACCGGCAT GGGCAGTATC 451 AAAGTCCTGC TCAACGACAA GCGCGAATAT
ACCGCCAAAC TCATCGGTTC 501 GGATGTCCAA TCCGATGTCG CCCTTCTGAA
AATCGACGCA ACGGAAGAGC 551 TGCCCGTCGT CAAAATCGGC AATCCCAAAG
ATTTGAAACC GGGCGAATGG 601 GTCGCCGCCA TCGGCGCGCC CTTCGGCTTC
GACAACAGCG TGACCGCCGG 651 CNTCGTGTCC GCCAAAGGCA GAAGCCTGCC
CAACGAAAGC TACACACCCT 701 TCATCCAAAC CGACGTTGCC ATCAATCCGG
GCAACTCCGG CGGCCCGCTG 751 TTCAACTTAA AAGGACAGGT CGTCGGCATC
AACTCGCAAA TATACAGCCG 801 CAGCGGCGGA TTCATGGGCA TTTCCTTCGC
CATCCCGATT GACGTTGCCA 851 TGAATGTCGC CGAACAGCTG AAAAACACCG
GCAAAGTCCA ACGCGGACAA 901 CTGGGCGTGA TTATTCAAGA AGTATCCTAC
GGTTTGGCAC AATCGTTCGG 951 TTTGGACAAA GCCGGCGGCG CACTGATTGC
CAAAATCCTG CCCGGCAGCC 1001 CCGCAGAACG TGCCGGCCTG CGGGCGGGCG
ACATCGTCCT CAGCCTCGAC 1051 GGCGGAGAAA TACGTTCTTC CGGCGACCTT
CCCGTTATGG TCGGCGCCAT 1101 TACGCCGGGA AAAGAAGTCA GCCTCGGCGT
ATGGCGCAAA GGCGAAGAAA 1151 TCACAATCAA AGTCAAGCTG GGCAACGCCG
CCGAGCATAT CGGCGCATCA 1201 TCCAAAACAG ATGAAGCCCC CTACACCGAA
CAGCAATCCG GTACGTTCTC 1251 GGTCGAATCC GCAGGCATTA CCCTTCAGAC
ACATACCGAC AGCAGCGGCG 1301 GACACCTCGT CGTCGTACGG GTTTCCGACG
CGGCAGAACG CGCAGGCTTG 1351 AGGCGCGGCG ACGAAATTCT TGCCGTCGGG
CAAGTCCCCG TCAATGACGA 1401 AGCCGGTTTC CGCAAAGCTA TGGACAAGGC
AGGCAAAAAC GTCCCCCTGC 1451 TGATCATGCG CCGTGGCAAC ACGCTGTTTA
TCGCATTAAA CCTGCAATAA
This corresponds to the amino acid sequence <SEQ ID 2972; ORF
986.a>:
TABLE-US-03489 a986.pep 1 VFKKYQYLAL AALCAASLAG CDKAGSFFGA
DKKEASFVER IKHTKDDGSV 51 SMLLPDFVQL VQSEGPAVVN IQAAPAPRTQ
NGSSNAETDS DPLADSDPFY 101 EFFKRLVPNM PEIPQEEADD GGLNFGSGFI
ISKDGYILTN THVVTGMGSI 151 KVLLNDKREY TAKLIGSDVQ SDVALLKIDA
TEELPVVKIG NPKDLKPGEW 201 VAAIGAPFGF DNSVTAGXVS AKGRSLPNES
YTPFIQTDVA INPGNSGGPL 251 FNLKGQVVGI NSQIYSRSGG FMGISFAIPI
DVAMNVAEQL KNTGKVQRGQ 301 LGVIIQEVSY GLAQSFGLDK AGGALIAKIL
PGSPAERAGL RAGDIVLSLD 351 GGEIRSSGDL PVMVGAITPG KEVSLGVWRK
GEEITIKVKL GNAAEHIGAS 401 SKTDEAPYTE QQSGTFSVES AGITLQTHTD
SSGGHLVVVR VSDAAERAGL 451 RRGDEILAVG QVPVNDEAGF RKAMDKAGKN
VPLLIMRRGN TLFIALNLQ* m986/a986 98.2% identity in 499 aa overlap 10
20 30 40 50 60 m986.pep
VFKKYQYLALAALCAASLAGCDKAGSFFVADKKEASFVERIEHTKDDGSVSMLLPDFAQL
|||||||||||||||||||||||||||| ||||||||||||:|||||||||||||||:|| a986
VFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIKHTKDDGSVSMLLPDFVQL 10 20
30 40 50 60 70 80 90 100 110 120 m986.pep
VQSEGPAVVNIQAAPAPRTQNGSGNAENDSDPIADNDPFYEFFKRLVPNMPEIPQEEADD
|||||||||||||||||||||||:|||:||||:||:|||||||||||||||||||||||| a986
VQSEGPAVVNIQAAPAPRTQNGSSNAETDSDPLADSDPFYEFFKRLVPNMPEIPQEEADD 70 80
90 100 110 120 130 140 150 160 170 180 m986.pep
GGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREYTAKLIGSDVQSDVALLKIDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a986
GGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREYTAKLIGSDVQSDVALLKIDA 130
140 150 160 170 180 190 200 210 220 230 240 m986.pep
TEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGIVSAKGRSLPNESYTPFIQTDVA
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| a986
TEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGXVSAKGRSLPNESYTPFIQTDVA 190
200 210 220 230 240 250 260 270 280 290 300 m986.pep
INPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQRGQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a986
INPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQRGQ 250
260 270 280 290 300 310 320 330 340 350 360 m986.pep
LGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRSSGDL
||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||| a986
LGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRSSGDL 310
320 330 340 350 360 370 380 390 400 410 420 m986.pep
PVMVGAITPGKEVSLGVWRKGEEITIKVKLGNAAEHIGASSKTDEAPYTEQQSGTFSVES
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a986
PVMVGAITPGKEVSLGVWRKGEEITIKVKLGNAAEHIGASSKTDEAPYTEQQSGTFSVES 370
380 390 400 410 420 430 440 450 460 470 480 m986.pep
AGITLQTHTDSSGGHLVVVRVSDAAERAGLRRGDEILAVGQVPVNDEAGFRKAMDKAGKN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a986
AGITLQTHTDSSGGHLVVVRVSDAAERAGLRRGDEILAVGQVPVNDEAGFRKAMDKAGKN 430
440 450 460 470 480 490 500 m986.pep VPLLIMRRGNTLFIALNLQX
|||||||||||||||||||| a986 VPLLIMRRGNTLFIALNLQX 490 500
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2973>:
TABLE-US-03490 g987.seq 1 ATGAAAACAC GCAGCCTCAT TTCCCTTTTA
TGCCTCCTTC TCTGTTCATG 51 TTCTTCATGG TTGCCCCCAC TGGAAGAACG
GACGGAAAGC CGTCATTTTA 101 ATACTTCCAA ACCTGTCCTC CTGGACAACA
TCCTGCAAAT CCGGCACACC 151 CCTCATAACA ACGGGCTATC CGACATCTAC
CTGCTCGACG ACCCCCACGA 201 AGCCTTTGCC GCCCGCGCCG CCCTTATCGA
ATCTGCCGAA CACAGCCTCG 251 ATTTGCAATA CTACATTTGG CGCAACGaCA
TTTCCGGCAG GCTGCTGTTC 301 AACCTCATGT ACCTTGCCGC agaacgcGGC
GTGCGCGTAC GCCTGCTGTt 351 ggacgacaAC AACAcgcgcg gcttggacga
tctcctGCTC GCCCTCGACA 401 GCCATCCCAA TAtctaagtG CGCCTGTTCA
ACCCCTtcgt CCTACGCAAA 451 TGGCGCGCAC TCGGCTACCT GACCGACTTC
CCCCGCCTCA ACCGCCGCAT 501 GCACAACAAA TCCTTTACCG CCGACAACCG
CGCCACCATA CTCGGCGGAC 551 GCAATATCGG CGACGAATAC TTCAAAGTCG
GTGAGGACAC CGTTTTCGCC 601 GACCTGGACA TCCTCGCCAC CGGCAGCGTC
GTCGGCGAAG TATCGCACGA 651 CTTCGACCGC TACTGGGCAA GCCATTCCGC
CCACAACGCC ACGCGCATCA 701 TCCGCAGCGG CAACATCGGC AAGGGTCTTC
AAGCACTCGG ATACAACGAC 751 GAAACATCCA GACACGCGCT CCTGCGCTAC
CGCGAAACCG TCGAACAGTC 801 GCCCCTCTAC CAAAAAATAC AGACGGGACG
CATCGACTGG CAGAGCGTCC 851 AAACCCGCCT GATCAGCGAC AGCCCTGCAA
AAGGACTCGA CCGCGACCGC 901 CGCAAACCGC CGATTGCCGG GAGGCTGCAA
GACGCGCTCA AACAGCCCGA 951 AAAAAGCGTC TATCTGGTTT CACCCTATTT
CGTCCCTACA AAATCCGGCA 1001 CAGACGCACT GGCAAAACTG GTGCAGGACG
GCATAGACGT TACCGTCCTG 1051 ACCAACTCGC TACAGGCGAC CGACGTTGCC
GCCGTCCATT CCGGCTACGT 1101 CAAATACCGA AAACCGCTGC TCAAAGCCGG
CATCAAACTC TACGAGCTGC 1151 AACCCAACCA TGCCGTCCCC GCCACAAAAG
ACAAAGGCCT GACCGGCAGC 1201 TCCGTAACCA GCCTGCATGC CAAAACCTTC
ATTGTGGacg gCAAACGCAT 1251 CTTCATCGGC TCATTCAACC TCGACCCCCG
TTCCGCACGG CTCAATACCG 1301 AAATGGGCGT CGTCATCGAA AGCCCCAAAA
TCGCAGAACA GATGGAGCGC 1351 AccctCGCCG AtacCACACC CGAATACGCC
TACCGCGTTA CCCTCGACAA 1401 ACACAACCGC CTGCAATGGC ACGATCCCGC
CACCCGAAAA ACCTACCCGA 1451 ACGAACCCGA AGCCAAACTT TGGAAACGCA
TCGCCGCAAA AATCCTATCC 1501 CTGCTGCCCA TCGAAGGTTT ATTATAG
This corresponds to the amino acid sequence <SEQ ID 2974; ORF
987.ng>:
TABLE-US-03491 g987.pep 1 MKTRSLISLL CLLLCSCSSW LPPLEERTES
RHFNTSKPVL LDNILQIRHT 51 PHNNGLSDIY LLDDPHEAFA ARAALIESAE
HSLDLQYYIW RNDISGRLLF 101 NLMYLAAERG VRVRLLLDDN NTRGLDDLLL
ALDSHPNI*V RLFNPFVLRK 151 WRALGYLTDF PRLNRRMHNK SFTADNRATI
LGGRNIGDEY FKVGEDTVFA 201 DLDILATGSV VGEVSHDFDR YWASHSAHNA
TRIIRSGNIG KGLQALGYND 251 ETSRHALLRY RETVEQSPLY QKIQTGRIDW
QSVQTRLISD SPAKGLDRDR 301 RKPPIAGRLQ DALKQPEKSV YLVSPYFVPT
KSGTDALAKL VQDGIDVTVL 351 TNSLQATDVA AVHSGYVKYR KPLLKAGIKL
YELQPNHAVP ATKDKGLTGS 401 SVTSLHAKTF IVDGKRIFIG SFNLDPRSAR
LNTEMGVVIE SPKIAEQMER 451 TLADTTPEYA YRVTLDKHNR LQWHDPATRK
TYPNEPEAKL WKRIAAKILS 501 LLPIEGLL*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2975>:
TABLE-US-03492 m987.seq 1 ATGAAAACAC GCAGCCTAAT TTCCCTTTTA
TGCCTCCTTC TCTGTTCATG 51 TTCTTCATGG TTGCCCCCAC TGGAAGAACG
GACGGAAAGC CGTCATTTCA 101 ATACTTCCAA ACCCGTCCGC CTGGACAACA
TCCTGCAAAT CCGGCACACC 151 CCTCATACCA ACGGGCTATC CGATATCTAT
CTGTTGAACG ACCCCCACGA 201 AGCCTTTGCC GCCCGCGCCG CCCTTATCGA
ATCTGCCGAA CACAGCCTCG 251 ATTTGCAATA CTACATCTGG CGCAACGACA
TTTCCGGCAG GCTGCTGTTC 301 AACCTCGTGT ACCTTGCCGC AGAACGCGGT
GTGCGCGTAC GCCTGCTGTT 351 GGACGACAAC AACACGCGCG GATTGGACGA
CCTCCTGCTT GCCCTCGACA 401 GCCATCCCAA TATCGAAGTG CGCCTGTTCA
ACCCCTTCGT CTTACGAAAA 451 TGGCGCGCAC TCGGCTACCT GACCGACTTC
CCCCGCCTCA ACCGCCGCAT 501 GCACAACAAA TCCTTTACCG CCGACAACCG
CGCCACCATA CTCGGCGGAC 551 GCAATATCGG CGACGAATAC TTCAAAGTCG
GTGAGGACAC CGTTTTCGCC 601 GATTTGGACA TCCTCGCCAC CGGCAGCGTC
GTCGGCGAAG TATCGCACGA 651 CTTCGACCGC TACTGGGCAA GCCATTCCGC
CCACAACGCC ACGCGCATCA 701 TCCGCAGCGG CGACATCGGC AAGGGTCTTC
AAGCACTCGG ATACAACGAC 751 GAAACGTCCA GACACGCGCT CCTGCGCTAC
CGCGAAACCG TCGAACAGTC 801 GCCCCTCTAC CAAAAAATAC AGACAGGATG
CATCGACTGG CAGAGCGTCC 851 GAACCCGCCT CATCAGCGAC GACCCTGCAA
AAGGACTCGA CCGCGACCGC 901 CGCAAACCGC CGATTGCCGG GCGGCTGCAA
GACGCGCTCA AACAGCCCGA 951 AAAAAGCGTC TATCTGGTTT CACCCTATTT
CGTTCCCACA AAATCCGGCA 1001 CAGACGCACT GGCAAAACTG GTGCAGGACG
GCATAGACGT TACCGTTCTG 1051 ACCAACTCGC TGCAGGCGAC CGACGTTGCC
GCCGTCCATT CCGGCTATGT 1101 CAAATACCGA AAACCGCTGC TCAAAGCCGG
CATCAAACTC TACGAGCTGC 1151 AACCCAACCA TGCCGTCCCC GCCACAAAAG
ACAAAGGCCT GACCGGCAGC 1201 TCCGTAACCA GCCTGCACGC CAAAACCTTC
ATTGTGGACG GCAAACGCAT 1251 CTTCATCGGT TCGTTCAACC TCGACCCCCG
TTCCGCGCGT CTCAACACCG 1301 AAATGGGCGT TGTTATCGAA AGCCCCAAAA
TCGCAGAACA GATGGAGCGC 1351 ACCCTTGCCG ATACCACACC CGCCTACGCC
TACCGCGTTA CCCTCGACAG 1401 GCACAACCGC CTGCAATGGC ACGATCCCGC
CACCCGAAAA ACCTACCCGA 1451 ACGAACCCGA AGCCAAACTT TGGAAACGCA
TCGCCGCAAA AATCCTATCC 1501 CTGCTGCCCA TAGAAGGTTT ATTATAG
This corresponds to the amino acid sequence <SEQ ID 2976; ORF
987>:
TABLE-US-03493 m987.pep 1 MKTRSLISLL CLLLCSCSSW LPPLEERTES
RHFNTSKPVR LDNILQIRHT 51 PHTNGLSDIY LLNDPHEAFA ARAALIESAE
HSLDLQYYIW RNDISGRLLF 101 NLVYLAAERG VRVRLLLDDN NTRGLDDLLL
ALDSHPNIEV RLFNPFVLRK 151 WRALGYLTDF PRLNRRMHNK SFTADNRATI
LGGRNIGDEY FKVGEDTVFA 201 DLDILATGSV VGEVSHDFDR YWASHSAHNA
TRIIRSGDIG KGLQALGYND 251 ETSRHALLRY RETVEQSPLY QKIQTGCIDW
QSVRTRLISD DPAKGLDRDR 301 RKPPIAGRLQ DALKQPEKSV YLVSPYFVPT
KSGTDALAKL VQDGIDVTVL 351 TNSLQATDVA AVHSGYVKYR KPLLKAGIKL
YELQPNHAVP ATKDKGLTGS 401 SVTSLHAKTF IVDGKRIFIG SFNLDPRSAR
LNTEMGVVIE SPKIAEQMER 451 TLADTTPAYA YRVTLDRHNR LQWHDPATRK
TYPNEPEAKL WKRIAAKILS 501 LLPIEGLL*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-03494 m987/g987 97.8% identity in 508 aa overlap 10 20 30
40 50 60 m987.pep
MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNILQIRHTPHTNGLSDIY
||||||||||||||||||||||||||||||||||||||| ||||||||||||:||||||| g987
MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNISKPVLLDNILQIRHIPHNNGLSDIY 10 20
30 40 50 60 70 80 90 100 110 120 m987.pep
LLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNLVYLAAERGVRVRLLLDDN
||:|||||||||||||||||||||||||||||||||||||||:||||||||||||||||| g987
LLDDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNLMYLAAERGVRVRLLLDDN 70 80
90 100 110 120 130 140 150 160 170 180 m987.pep
NTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDFPRLNRRMHNKSFTADNRATI
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| g987
NTRGLDDLLLALDSHPNIXVRLFNPFVLRKWRALGYLTDFPRLNRRMHNKSFTADNRATI 130
140 150 160 170 180 190 200 210 220 230 240 m987.pep
LGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDFDRYWASHSAHNATRIIRSGDIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| g987
LGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDFDRYWASHSAHNATRIIRSGNIG 190
200 210 220 230 240 250 260 270 280 290 300 m987.pep
KGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTGCIDWQSVRTRLISDDPAKGLDRDR
|||||||||||||||||||||||||||||||||||| ||||||:||||||:||||||||| g987
KGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTGRIDWQSVQTRLISDSPAKGLDRDR 250
260 270 280 290 300 310 320 330 340 350 360 m987.pep
RKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGTDALAKLVQDGIDVTVLTNSLQATDVA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g987
RKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGTDALAKLVQDGIDVTVLTNSLQATDVA 310
320 330 340 350 360 370 380 390 400 410 420 m987.pep
AVHSGYVKYRKPLLKAGIKLYELQPNHAVPATKDKGLTGSSVTSLHAKTFIVDGKRIFIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g987
AVHSGYVKYRKPLLKAGIKLYELQPNHAVPATKDKGLTGSSVTSLHAKTFIVDGKRIFIG 370
380 390 400 410 420 430 440 450 460 470 480 m987.pep
SFNLDPRSARLNTEMGVVIESPKIAEQMERTLADTTPAYAYRVTLDRHNRLQWHDPATRK
||||||||||||||||||||||||||||||||||||| ||||||||:||||||||||||| g987
SFNLDPRSARLNTEMGVVIESPKIAEQMERTLADTTPEYAYRVTLDKHNRLQWHDPATRK 430
440 450 460 470 480 490 500 509 m987.pep
TYPNEPEAKLWKRIAAKILSLLPIEGLLX ||||||||||||||||||||||||||||| g987
TYPNEPEAKLWKRIAAKILSLLPIEGLLX 490 500
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2977>:
TABLE-US-03495 a987.seq 1 ATGAAAACAC GCAGCCTAAT TTCCCTTTTA
TGCCTCCTTC TCTGTTCATG 51 TTCTTCATGG TTGCCCCCAC TGGAAGAACG
GACGGAAAGC CGTCATTTCA 101 ATACTTCCAA ACCCGTCCGC CTGGACAACA
TCCTGCAAAT CCGGCACACC 151 CCTCATACCA ACGGGCTATC CGATATCTAT
CTGTTGAACG ACCCCCACGA 201 AGCCTTTGCC GCCCGCGCCG CCCTTATCGA
ATCTGCCGAA CACAGCCTCG 251 ATTTGCAATA CTACATCTGG CGCAACGACA
TTTCCGGCCG ACTGCTGTTC 301 AACCTCGTGT ACCTTGCCGC AGAACGCGGT
GTGCGCGTAC GCCTGCTGTT 351 GGACGACAAC AACACGCGCG GATTGGACGA
CCTCCTGCTC GACCTGGACA 401 GCCATCCCAA TATCGAAGTG CGCCTGTTCA
ACCCCTTCGT CTTACGAAAA 451 TGGCGCGCAC TCGGCTACCT GACCGACTTC
CCCCGCCTCA ACCGCCGCAT 501 GCACAACAAA TCCTTTACCG CCGACAACCG
CGCCACCATA CTCGGCGGAC 551 GCAATATCGG CGACGAATAC TTCAAAGTCG
GTGAGGACAC CGTTTTCGCC 601 GACCTGGACA TCCTCGCCAC CGGCAGCGTC
GTCGGCGAAG TATCGCACGA 651 CTTCGACCGC TACTGGGCAA GCCATTCCGC
CCACAACGCC ACGCGCATCA 701 TCCGCAGCGG CAACATCGGC AAGGGTCTTC
AAGCACTCGG ATACAACGAC 751 GAAACGTCCA GACACGCGCT CCTGCGCTAC
CGCGAAACCG TCGAACAGTC 801 GCCCCTCTAC CAAAAAATAC AGACAGGACG
CATCGACTGG CAGAGCGTCC 851 AAACCCGCCT CATCAGCGAC GACCCTGCAA
AAGGACTCGA CCGCGACCGC 901 CGCAAACCGC CGATTGCCGG GCGGCTGCAA
GACGCGCTCA AACAGCCCGA 951 AAAAAGCGTC TATCTGGTTT CACCCTATTT
CGTCCCCACA AAATCCGGCA 1001 CAGACGCACT GGCAAAACTG GTGCAGGACG
GCATAGACGT TACCGTCCTG 1051 ACCAACTCGC TACAGGCGAC CGACGTTGCC
GCCGTCCATT CCGGCTATGT 1101 CAAATACCGA AAACCGCTGC TCAAAGCCGG
CATCAAACTC TACGAGCTGC 1151 AACCCAACCA TGCCGTCCCT GCCACAAAAG
ACAAAGGCCT GACCGGCAGC 1201 TCCGTAACCA GCCTGCATGC CAAAACCTTC
ATTGTGGACG GCAAACGCAT 1251 CTTCATCGGC TCATTCAACC TCGACCCCCG
TTCCGCACGG CTCAATACTG 1301 AAATGGGCGT TGTTATCGAA AGCCCCAAAA
TCGCAGAACA GATGGAGCGC 1351 ACCCTTGCCG ATACCTCACC CGAATACGCC
TACCGCGTTA CCCTCGACAG 1401 GCACAACCGC CTGCAATGGC ACGATCCCGC
CACCCGAAAA ACCTACCCGA 1451 ACGAACCCGA AGCCAAACTT TGGAAACGCA
TCGCCGCAAA AATCCTATCC 1501 CTGCTGCCCA TAGAAAGTTT ATTATAG
This corresponds to the amino acid sequence <SEQ ID 550; ORF
2978.a>:
TABLE-US-03496 a987.pep 1 MKTRSLISLL CLLLCSCSSW LPPLEERTES
RHFNTSKPVR LDNILQIRHT 51 PHTNGLSDIY LLNDPHEAFA ARAALIESAE
HSLDLQYYIW RNDISGRLLF 101 NLVYLAAERG VRVRLLLDDN NTRGLDDLLL
ALDSHPNIEV RLFNPFVLRK 151 WRALGYLTDF PRLNRRMHNK SFTADNRATI
LGGRNIGDEY FKVGEDTVFA 201 DLDILATGSV VGEVSHDFDR YWASHSAHNA
TRIIRSGNIG KGLQALGYND 251 ETSRHALLRY RETVEQSPLY QKIQTGRIDW
QSVQTRLISD DPAKGLDRDR 301 RKPPIAGRLQ DALKQPEKSV YLVSPYFVPT
KSGTDALAKL VQDGIDVTVL 351 TNSLQATDVA AVHSGYVKYR KPLLKAGIKL
YELQPNHAVP ATKDKGLTGS 401 SVTSLHAKTF IVDGKRIFIG SFNLDPRSAR
LNTEMGVVIE SPKIAEQMER 451 TLADTSPEYA YRVTLDRHNR LQWHDPATRK
TYPNEPEAKL WKRIAAKILS 501 LLPIESLL* m987/a987 98.8% identity in 508
aa overlap 10 20 30 40 50 60 m987.pep
MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNILQIRHTPHTNGLSDIY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a987
MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNILQIRHTPHTNGLSDIY 10 20
30 40 50 60 70 80 90 100 110 120 m987.pep
LLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNLVYLAAERGVRVRLLLDDN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a987
LLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNLVYLAAERGVRVRLLLDDN 70 80
90 100 110 120 130 140 150 160 170 180 m987.pep
NTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDFPRLNRRMHNKSFTADNRATI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a987
NTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDFPRLNRRMHNKSFTADNRATI 130
140 150 160 170 180 190 200 210 220 230 240 m987.pep
LGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDFDRYWASHSAHNATRIIRSGDIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|| a987
LGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDFDRYWASHSAHNATRIIRSGNIG 190
200 210 220 230 240 250 260 270 280 290 300 m987.pep
KGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTGCIDWQSVRTRLISDDPAKGLDRDR
|||||||||||||||||||||||||||||||||||| ||||||:|||||||||||||||| a987
KGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTGRIDWQSVQTRLISDDPAKGLDRDR 250
260 270 280 290 300 310 320 330 340 350 360 m987.pep
RKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGTDALAKLVQDGIDVTVLTNSLQATDVA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a987
RKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGTDALAKLVQDGIDVTVLTNSLQATDVA 310
320 330 340 350 360 370 380 390 400 410 420 m987.pep
AVHSGYVKYRKPLLKAGIKLYELQPNHAVPATKDKGLTGSSVTSLHAKTFIVDGKRIFIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a987
AVHSGYVKYRKPLLKAGIKLYELQPNHAVPATKDKGLTGSSVTSLHAKTFIVDGKRIFIG 370
380 390 400 410 420 430 440 450 460 470 480 m987.pep
SFNLDPRSARLNTEMGVVIESPKIAEQMERTLADTTPAYAYRVTLDRHNRLQWHDPATRK
|||||||||||||||||||||||||||||||||||:| |||||||||||||||||||||| a987
SFNLDPRSARLNTEMGVVIESPKIAEQMERTLADTSPEYAYRVTLDRHNRLQWHDPATRK 430
440 450 460 470 480 490 500 509 m987.pep
TYPNEPEAKLWKRIAAKILSLLPIEGLLX |||||||||||||||||||||||||:||| a987
TYPNEPEAKLWKRIAAKILSLLPIEGLLX 490 500
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2979>:
TABLE-US-03497 g988.seq 1 ATGAATAAAA ATATTAAATC TTTAAATTTA
CGGGAAAAAG ACCCGTTTTT 51 AAGTCGTGAA AAACAGCGTT ATGAACATCC
TTTGCCCAGT CGGgaATGGA 101 TAATCGAATT GTTGGAGCGC AAAGGTGTGC
CTTCAAAAAT CGAATCGCTT 151 GCACGCGAGC TGTCGATTAC GGAAGacgag
tATGTCTTTT TTGAACGCCG 201 TCTGAaggCG atgGCGCGGG AcggtCAGGT
TTTAATCAAC CGCCgaggcg 251 CagtTTGCGc gGCggacaag ctgGATTTGG
TCAAATGccg Cgtcgaggcg 301 catAAgGAcg gtttcggctt cgcCGTGCCG
CTCATGCCGA TGGACGAAGG 351 GGATTTCGTT TTATACGAAC GCCAgatgcg
tggTGtcatG CAcggcgaca 401 ccgttACCGT CCGTCCTGCg ggtatggaCC
GCAGGGGccg ccgcGAAggg 451 acgtttctGG ATATTGTCGA ACGCGCGCAA
AGCAAAGTTG TCGGCCGTTT 501 CTATATGGAT AGGGGCGTGG CGATTTTGGA
GCCGGAAGAC AAGCGTCTGA 551 ACCAAAGCAT CGTGTTGGAA CCGGACGGCG
TGGCGCGTTT CAAACCCGAA 601 TCCGGTCAGG TTATCGTCGG CAAAATTGAG
GTTTATCCCG AGCAAAACCG 651 GCCTGCAGTG GCAAAAATCA TTGAAGTTTT
GGGCGATTAT GCCGACAGCG 701 GGATGGAAAt cgAAATTGCC GTGCGCAAGC
ATCATTTGCC GCAccgaTTC 751 AGTGAagcgt gtGcCAAATC CGcgaaAAAA
ATtcccgacc ATGTACGCAA 801 AAGCGATTTG AAAGGCCGCG TCGATTTGTG
CGACCTTCCT TTGGTAACGA 851 TAGACGGCGA AACGGCGCGC GATTTCGACG
ACGCGGTGTT TGCCGAAAAA 901 GTCGGACGCA ATTACCGCCT GGTCGTGGCG
ATTGCGGATG TCAGCCATTA 951 TGTCCGCCCT GACGATGCGA TTGATGCAGA
TGCTCAAGAA CGCAGTACCA 1001 GCGTGTATTT CCCGCGCCGT ATGATTCCGA
TGCTGCCGGA AAACCTGTCC 1051 AACGGCATCT GCTCGCTCAA TCCCGATGTC
GAGCGTTTGT GTATGGTGTG 1101 CGATATGGTC GTTACCTATG CGGGCAATAT
CAAAGAATAC CGCTTCTATC 1151 CCGCCGTGAT GCGCTCTCAT GCCCGCCTGA
CCTACAACCA AGTTTGGAAA 1201 TGGCTTTCAG ACGGCATCGG GAATCCGCAC
AAAGCCCAAA TCGACACGCT 1251 TTACAAGCTG TTTAAAATTT TGCAGAAAAA
ACGTCTGGCG CGCGGGGCGG 1301 TGGAGTTTGA AAGCGTCGAA ACCCAGATGA
TTTTCGACGA CAACGGCAAA 1351 ATCGAAAAAA TTGTCCCCGT CGTCCGCAAC
gatGCCCACA AGCTGATTGA 1401 AGAATGTATG CTGGCGGCGA ATGTTTGCGC
GGCGGATTTT CTGTTGAAAA 1451 ACAAACATAC GGCTTTGTTC CGCAACCATT
TGGGCCCCAC GCCCGAAAAA 1501 CTCGCCACCC TGCGCGAGCA GCTCGGTCTG
TTGGGGCTTC AACTTGGCGG 1551 CGGCGACAAC CCGTCGCCGA AAGACTATGC
CGCGCTTGCC GAACAATTCA 1601 AAGGCAGGCC GGATGCCGAA TTGCTGCAAG
TCATGATGTT GCGCTCCATG 1651 CAGCAGGCGG TTTACGAACC GCATTGCGAA
GGGCATTTCG GTTTGGCTTA 1701 TGAAGCATAC GCCCACTTTA CCTCGCCCAT
CCGCCGCTAT CCCGACCTGA 1751 CCGTCCACCG TGCCATCAAA GCCGTATTGA
ACCGGAAAAC CTACACGCCA 1801 AACAAAAGCT GGCAGGCTTT GGGCGTGCAT
ACTTCGTTTT GCGAACGCCG 1851 TGCCGACGAT GCTGGCCGCG ATGTGGAAAA
CTGGCTGAAA ACTTATTATA 1901 TGCGCGATAA GGTCGGTGAA ATATTTGAAG
GcaaaatCtc ccggggtgtg 1951 gcaaaTtttg gaATATTTGT CACTTTGGAC
GATATccata tcgacggtct 2001 ggtacaTATC AGCGatttgg gcgaAGATTA
TTTCaacttc cgccccgAAA 2051 TCATGGCAAT CGAAGGCGAA CGCAGCGGCA
TCCGTTTCAA TATGGGGGAC 2101 AGGGTTGCCG TCCGGGTCGC GCGTGCCGAT
TTGGATGATG GAAAAATCGA 2151 CTTTGTCCTA ATTGCCGGAG AAAGCGGCAG
GCGGCGGAAG GTCAAATTAT 2201 CCGCATCTGC CAAACCGGCA GGGGCGGCGG
GGAAAGGGAA ATCGAAAACC 2251 ACCGCCGAGA AAAAAACAGC CCGATGCGGC
AAAGTAAGGG GAAGGGGCGT 2301 GCCTGCCGTT GCCGAATCGG GGAAAAAGGC
AAAGAAACCG GTTCCGATTA 2351 AGGTCAAAAA ACGGAAAGGC AAATCATAA
This corresponds to the amino acid sequence <SEQ ID 2980; ORF
988.ng>:
TABLE-US-03498 g988.pep 1 MNKNIKSLNL REKDPFLSRE KQRYEHPLPS
REWIIELLER KGVPSKIESL 51 ARELSITEDE YVFFERRLKA MARDGQVLIN
RRGAVCAADK LDLVKCRVEA 101 HKDGFGFAVP LMPMDEGDFV LYERQMRGVM
HGDTVTVRPA GMDRRGRREG 151 TFLDIVERAQ SKVVGRFYMD RGVAILEPED
KRLNQSIVLE PDGVARFKPE 201 SGQVIVGKIE VYPEQNRPAV AKIIEVLGDY
ADSGMEIEIA VRKHHLPHRF 251 SEACAKSAKK IPDHVRKSDL KGRVDLCDLP
LVTIDGETAR DFDDAVFAEK 301 VGRNYRLVVA IADVSHYVRP DDAIDADAQE
RSTSVYFPRR MIPMLPENLS 351 NGICSLNPDV ERLCMVCDMV VTYAGNIKEY
RFYPAVMRSH ARLTYNQVWK 401 WLSDGIGNPH KAQIDTLYKL FKILQKKRLA
RGAVEFESVE TQMIFDDNGK 451 IEKIVPVVRN DAHKLIEECM LAANVCAADF
LLKNKHTALF RNHLGPTPEK 501 LATLREQLGL LGLQLGGGDN PSPKDYAALA
EQFKGRPDAE LLQVMMLRSM 551 QQAVYEPHCE GHFGLAYEAY AHFTSPIRRY
PDLTVHRAIK AVLNRKTYTP 601 NKSWQALGVH TSFCERRADD AGRDVENWLK
TYYMRDKVGE IFEGKISRGV 651 ANFGIFVTLD DIHIDGLVHI SDLGEDYFNF
RPEIMAIEGE RSGIRFNMGD 701 RVAVRVARAD LDDGKIDFVL IAGESGRRRK
VKLSASAKPA GAAGKGKSKT 751 TAEKKTARCG KVRGRGVPAV AESGKKAKKP
VPIKVKKRKG KS*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2981>:
TABLE-US-03499 m988.seq (partial) 1 ..ACAGTTCTGG ATATTGTCGA
ACGCGCGCAA AGCAAAGTGG TCGGCCGTTT 51 CTATATGGAT AGGGGCGTGG
CGATTTTGGA GCCGGAAGAC AAGCGTCTGA 101 ACCAAAGCAT CGTATTGGAA
CCGGACGGCG TGGCGCGTTT CAAACCTGAA 151 TCCGGTCAGG TCATCGTCGG
CGAAATTGAG GTTTATCCTG AGCAAAACCG 201 GCCGGCAGTG GCAAAAATCA
TCGAAGTTTT GGGCGATTAT GCCGACAGCG 251 GCATGGAGAT TGAAATTGCC
GTGCGCAAGC ATCATTTGCC GCACCAATTC 301 AGTGAAGCGT GTGCCAAAGC
TGCGAAAAAA ATTCCCGTCC ATGTACGCAA 351 AAGCGATTTG AAAGGCCGCG
TCGATTTGCG CGACCTGCCT TTGGTAACGA 401 TAGACGGCGA AACGGCGCGC
GATTTCGACG ACGCGGTGTT TGCCGAAAAA 451 GTCGGACGCA ATTACCGTCT
GGTCGTGGCG ATTGCGGATG TCAGCCATTA 501 TGTCCGCCCT GACGATGTGA
TTGATGCAGA TGCTCAAGAA CGCAGTACCA 551 GCGTATATTT CCCGCGCCGT
GTGATTCCGA TGCTGCCGGA AAACCTGTCT 601 AACGGCATTT GCTCGCTCAA
TCCCGATGTC GAGCGTTTGT GTATGGTGTG 651 CGATATGGTC GTTACCTATG
CGGGCAATAT CAAAGAATAC CGCTTCTACC 701 CCGCCGTAAT GCGCTCTCAT
GCCCGCCTGA CCTACAACCA AGTTTGGAAA 751 TGGATTTCAG ACGGCATCGA
CCATCCGTAC AAAGCCCAAA TCGACACCCT 801 TTACAAACTC TTCAAAATCC
TTCAGAAAAA GCGTTTCGAA CGCGGCGCGG 851 TGGAGTTTGA AAGCGTCGAA
ACCCAGATGA TTTTCGATGA CAACGGCAAA 901 ATCGAAAAAA TCGTCCCCGT
TGTCCGCAAC GATGCCCACA AGCTGATTGA 951 AGAATGTATG CTGGCGGCGA
ATGTTTGCGC AGCGGATTTC CTGTTGAAAA 1001 ACAAGCATAC GGCTTTGTTC
CGCAACCATT TGGGCCCCAC GCCCGAAAAA 1051 CTCGCCACCC TGCGCGAGCA
GCTCGGTCTG TTGGGGCTTC AACTTGGCGG 1101 CGGCGACAAC CCGTCGCCGA
AAGACTATGC CGCGCTTGTC GAACAATTCA 1151 AAGGCAGACC TGATGCCGAA
TTGCTGCAAG TCATGATGTT GCGCTCCATG 1201 CAGCAGGCGG TTTACGAACC
GCATTGCGAC GGACACTTTG GTCTTGCCTA 1251 CGAAGCATAC GCCCACTTCA
CCTCGCCCAT CCGCCGCTAT CCCGACCTGA 1301 CCGTACACCG CGCCATCAAA
GCCGTGTTGA ATCAGCAAAC CTACACGCCA 1351 AAAAAAAGCT GGCAGGCTTT
GGGCGTGCAT ACCTCGTTCT GTGAGCGCCG 1401 TGCCGACGAC GCCAGCCGCG
ACGTGGAAAA CTGGCTGAAA ACCTATTATA 1451 TGCGCGATAA GGTCGGCGAA
GTATTCGAAG GTAAAATCTC CGGCATGACC 1501 AGTTTTGGTA TCTTTGTAAC
ACTGGACGGC ATCCACATTG ACGGCTTGGT 1551 GCATATCAGC GATTTGGGCG
AAGACTATTT CAACTTCCGC CCCGAAATCA 1601 TGGCAATCGA AGGCGAACGC
AGCGGCATCC GTTTCAACAT GGGGGACAGG 1651 GTTGCCGTCC GGGTCGCCCG
TGCCGATTTG GATGACGGAA AAATCGATTT 1701 TGTCCTGATT GCCGGGGGGA
GCGGCAGGGG GCGGAAAGTT AAATCATCCG 1751 CGTCTGCCAA ACCGGCAGGG
ACGGCGGGGA AAGGGAAGCC GAAAACCGCC 1801 GCCGAGAAAA AAACAGCCCG
AGGCGGCAAA GTAAGGGGAA GGGGCGCGTC 1851 TGCCGCCGCA GAATCGAGGA
AAAAGGCAAA GAAACCGGTT CCGATTAAGG 1901 TAAAAAAACG GAAAGGCAAA
TCATAA
This corresponds to the amino acid sequence <SEQ ID 2982; ORF
988>:
TABLE-US-03500 m988.pep (partial) 1 ..TVLDIVERAQ SKVVGRFYMD
RGVAILEPED KRLNQSIVLE PDGVARFKPE 51 SGQVIVGEIE VYPEQNRPAV
AKIIEVLGDY ADSGMEIEIA VRKHHLPHQF 101 SEACAKAAKK IPVHVRKSDL
KGRVDLRDLP LVTIDGETAR DFDDAVFAEK 151 VGRNYRLVVA IADVSHYVRP
DDVIDADAQE RSTSVYFPRR VIPMLPENLS 201 NGICSLNPDV ERLCMVCDMV
VTYAGNIKEY RFYPAVMRSH ARLTYNQVWK 251 WISDGIDHPY KAQIDTLYKL
FKILQKKRFE RGAVEFESVE TQMIFDDNGK 301 IEKIVPVVRN DAHKLIEECM
LAANVCAADF LLKNKHTALF RNHLGPTPEK 351 LATLREQLGL LGLQLGGGDN
PSPKDYAALV EQFKGRPDAE LLQVMMLRSM 401 QQAVYEPHCD GHFGLAYEAY
AHFTSPIRRY PDLTVHRAIK AVLNQQTYTP 451 KKSWQALGVH TSFCERRADD
ASRDVENWLK TYYMRDKVGE VFEGKISGMT 501 SFGIFVTLDG IHIDGLVHIS
DLGEDYFNFR PEIMAIEGER SGIRFNMGDR 551 VAVRVARADL DDGKIDFVLI
AGGSGRGRKV KSSASAKPAG TAGKGKPKTA 601 AEKKTARGGK VRGRGASAAA
ESRKKAKKPV PIKVKKRKGK S*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-03501 m988/g988 94.2% identity in 642 aa overlap 10 20 30
m988.pep TVLDIVERAQSKVVGRFYMDRGVAILEPED |
|||||||||||||||||||||||||||| g988
LYERQMRGVMHGDTVTVRPAGMDRRGRREGTFLDIVERAQSKVVGRFYMDRGVAILEPED 130
140 150 160 170 180 40 50 60 70 80 90 m988.pep
KRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA
|||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| g988
KRLNQSIVLEPDGVARFKPESGQVIVGKIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA 190
200 210 220 230 240 100 110 120 130 140 150 m988.pep
VRKHHLPHQFSEACAKAAKKIPVHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK
||||||||:|||||||:||||| ||||||||||||| ||||||||||||||||||||||| g988
VRKHHLPHRFSEACAKSAKKIPDHVRKSDLKGRVDLCDLPLVTIDGETARDFDDAVFAEK 250
260 270 280 290 300 160 170 180 190 200 210 m988.pep
VGRNYRLVVAIADVSHYVRPDDVIDADAQERSTSVYFPRRVIPMLPENLSNGICSLNPDV
||||||||||||||||||||||:|||||||||||||||||:||||||||||||||||||| g988
VGRNYRLVVAIADVSHYVRPDDAIDADAQERSTSVYFPRRMIPMLPENLSNGICSLNPDV 310
320 330 340 350 360 220 230 240 250 260 270 m988.pep
ERLCMVCDMVVTYAGNIKEYRFYPAVMRSHARLTYNQVWKWISDGIDHPYKAQIDTLYKL
|||||||||||||||||||||||||||||||||||||||||:|||| :|:|||||||||| g988
ERLCMVCDMVVTYAGNIKEYRFYPAVMRSHARLTYNQVWKWLSDGIGNPHKAQIDTLYKL 370
380 390 400 410 420 280 290 300 310 320 330 m988.pep
FKILQKKRFERGAVEFESVETQMIFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF
||||||||: |||||||||||||||||||||||||||||||||||||||||||||||||| g988
FKILQKKRLARGAVEFESVETQMIFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF 430
440 450 460 470 480 340 350 360 370 380 390 m988.pep
LLKNKHTALFRNHLGPTPEKLATLREQLGLLGLQLGGGDNPSPKDYAALVEQFKGRPDAE
|||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||| g988
LLKNKHTALFRNHLGPTPEKLATLREQLGLLGLQLGGGDNPSPKDYAALAEQFKGRPDAE 490
500 510 520 530 540 400 410 420 430 440 450 m988.pep
LLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP
|||||||||||||||||||:||||||||||||||||||||||||||||||||||::|||| g988
LLQVMMLRSMQQAVYEPHCEGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNRKTYTP 550
560 570 580 590 600 460 470 480 490 500 509 m988.pep
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKIS-GMTSFGIFVTLD
:||||||||||||||||||||:||||||||||||||||||:|||||| |:::|||||||| g988
NKSWQALGVHTSFCERRADDAGRDVENWLKTYYMRDKVGEIFEGKISRGVANFGIFVTLD 610
620 630 640 650 660 510 520 530 540 550 560 569 m988.pep
GIHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g988
DIHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVL 670
680 690 700 710 720 570 580 590 600 610 620 629 m988.pep
IAGGSGRGRKVKSSASAKPAGTAGKGKPKTAAEKKTARGGKVRGRGASAAAESRKKAKKP |||
||| |||| ||||||||:||||| ||:||||||| |||||||: |:||| |||||| g988
IAGESGRRRKVKLSASAKPAGAAGKGKSKTTAEKKTARCGKVRGRGVPAVAESGKKAKKP 730
740 750 760 770 780 630 640 m988.pep VPIKVKKRKGKSX |||||||||||||
g988 VPIKVKKRKGKSX 790
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2983>:
TABLE-US-03502 a988.seq 1 ATGAATAAAA ATATTAAATC TTTAAATTTA
CGGGAAAAAG ACCCGTTTTT 51 AAGTCGTGAA AAACAGCGTT ATGAACATCC
TTTGCCCAGT CGGGAATGGA 101 TAATCGAGCT GCTTGAACGT AAAGGCGTAC
CATCCAAGAT TGAAGCTTTG 151 GTACGCGAAT TGTCGATTAA GGAAGAAGAG
TACGAATTTT TCGAACGTCG 201 TCTGAAGGCG ATGGCGCGGG ACGGTCAGGT
TTTAATCAAC CGTCGGGGCG 251 CGGTTTGCGC GGCGGACAAA TTGGATTTGG
TCAAATGCCG TGTCAAGGCG 301 CACAAAGACC GCTTCGGTTT CGCCGTGCCG
CTCACGCCCG CCAAAGACGG 351 TGATTTTGTC TTGTACGAAC GCCAGATGCG
CGGCATTATG CACGGCGATA 401 TTGTCACTGT TCGTCCTGCC GGCATGGACG
GTAGGGGCCG CCGCGAAGGG 451 ACGGTTCTGG ATATTGTCGA ACGCGCGCAA
AGCAAAGTGG TCGGCCGTTT 501 CTANATGGAT AGGGGCGTGG CGATTTTGGA
GCCGGAAGAC AAGCGTCTGA 551 ACCAAAGCAT CGTATTGGAA CCGGACGGCG
TGGCGCGTTT CAAACCTGAA 601 TCCGGTCAGG TCATCGTCGG CGAAATTGAG
GTTTATCCTG AGCAAAACCG 651 GCCGGCAGTG GCAAAAATCA TCGAAGTTTT
GGGCGATTAT GCCGACAGCG 701 GCATGGAGAT TGAAATTGCC GTGCGCAAGC
ATCATTTGCC GCACCAATTC 751 AGTGAAGCGT GTGCCAAAGC CGCGAAAAAA
ATTCCCGACC ATGTACGCAA 801 AAGCGATTTG AAAGGCCGCG TCGATTTGCG
CGACCTGCCT TTGGTAACGA 851 TAGACGGCGA AACGGCTCGA GATTTTGACG
ATGCGGTGTT TGCCGAGAAA 901 ATCGGACGCA ATTACCGTCT GGTCGTGGCG
ATTGCCGATG TCAGCCATTA 951 TGTCCGCCCC GATGACGCTA TCGACACGGA
CGCTCAGGAA CGCAGCACCA 1001 GTGTTTACTT CCCGCGCCGC GTGATTCCCA
TGTTGCCGGA AAACCTGTCC 1051 AACGGCATCT GCTCGCTCAA TCCTCATGTC
GAGCGTTTGT GTGTGGTGTG 1101 CGATATGGTT ATCACTTACG CGGGCAATAT
CAAAGAATAC CGCTTCTACC 1151 CCGCCGTGAT GCGCTCTCAT GCCCGCCTGA
CCTACAACCA AGTTTGGAAA 1201 TGGCTTTCAG GCGGCATCGA GCATCCGTTC
AAAACCCAAA TCGACACGCT 1251 TTACAAACTC TTCAAAATCC TTCAGAAAAA
GCGTTTCGAA CGCGGGGCGG 1301 TGGAGTTTGA CAGCATCGAA ACCCAAATGC
TTTTCGACGA CAACGGTAAA 1351 ATTGAAAAAA TCGTCCCCGT TGTCCGCAAC
GATGCCCACA AGCTGATTGA 1401 AGAATGTATG TTGGCGGCAA ACGTTTGCGC
AGCGGATTTT CTGTTGAAAA 1451 ACAAGCATAC CGCATTGTTC CGCAACCATT
TGGGGCCCAC GCCCGAAAAA 1501 CTCGCCGCCT TGCGCGAGCA GCTCGGTCTG
TTGGGGCTTC AACTTGGCGG 1551 CGGCGACAAC CCGTCGCCGA AAGACTATGC
CGCGCTTGCC GGACAGTTCA 1601 AAGGCAGGCC GGATGCCGAA TTGCTGCAAG
TCATGATGTT GCGCTCCATG 1651 CAACAGGCGG TTTACGAACC GCATTGCGAC
GGACACTTTG GTCTTGCCTA 1701 CGAAGCATAC GCCCACTTCA CCTCGCCCAT
CCGCCGCTAT CCCGACCTGA 1751 CCGTACACCG CGCCATCAAA GCCGTGTTGA
ATCAGCAAAC CTACACGCCA 1801 AAAAAAAGCT GGCAGGCTTT GGGCGTGCAT
ACCTCGTTCT GTGAGCGCCG 1851 TGCCGACGAC GCCAGCCGCG ACGTGGAAAA
CTGGCTGAAA ACCTATTATA 1901 TGCGCGATAA GGTCGGCGAA GTATTCGAAG
GTAAAATCTC CGGCATGACC 1951 AGTTTTGGTA TCTTTGTAAC ACTGGACGGC
ATCCACATTG ACGGCTTGGT 2001 GCATATCAGC GATTTGGGCG AAGACTATTT
CAACTTCCGC CCCGAAATCA 2051 TGGCAATCGA AGGCGAACGC AGCGGCATCC
GTTTCAACAT GGGGGACAGG 2101 GTTGCCGTCC GGGTCGCCCG TGCCGATTTG
GATGACGGAA AAATCGATTT 2151 TGTCCTGATT GCCGGGGGGA GCGGCAGGGG
GCGGAAAGTT AAATCATCCG 2201 CGTCTGCCAA ACCGGCAGGG ACGGCGGGGA
AAGGGAAGCC GAAAACCGCC 2251 GCCGAGAAAA AAACAGCCCG AGGCGGCAAA
GTAAGGGGAA GGGGCGCGTC 2301 TGCCGCCGCA GAATCGAGGA AAAAGGCAAA
GAAACCGGTT CCGATTAAGG 2351 TAAAAAAACG GAAAGGCAAA TCATAA
This corresponds to the amino acid sequence <SEQ ID 2984; ORF
988.a>:
TABLE-US-03503 a988.pep 1 MNKNIKSLNL REKDPFLSRE KQRYEHPLPS
REWIIELLER KGVPSKIEAL 51 VRELSIKEEE YEFFERRLKA MARDGQVLIN
RRGAVCAADK LDLVKCRVKA 101 HKDRFGFAVP LTPAKDGDFV LYERQMRGIM
HGDIVTVRPA GMDGRGRREG 151 TVLDIVERAQ SKVVGRFXMD RGVAILEPED
KRLNQSIVLE PDGVARFKPE 201 SGQVIVGEIE VYPEQNRPAV AKIIEVLGDY
ADSGMEIEIA VRKHHLPHQF 251 SEACAKAAKK IPDHVRKSDL KGRVDLRDLP
LVTIDGETAR DFDDAVFAEK 301 IGRNYRLVVA IADVSHYVRP DDAIDTDAQE
RSTSVYFPRR VIPMLPENLS 351 NGICSLNPHV ERLCVVCDMV ITYAGNIKEY
RFYPAVMRSH ARLTYNQVWK 401 WLSGGIEHPF KTQIDTLYKL FKILQKKRFE
RGAVEFDSIE TQMLFDDNGK 451 IEKIVPVVRN DAHKLIEECM LAANVCAADF
LLKNKHTALF RNHLGPTPEK 501 LAALREQLGL LGLQLGGGDN PSPKDYAALA
GQFKGRPDAE LLQVMMLRSM 551 QQAVYEPHCD GHFGLAYEAY AHFTSPIRRY
PDLTVHRAIK AVLNQQTYTP 601 KKSWQALGVH TSFCERRADD ASRDVENWLK
TYYMRDKVGE VFEGKISGMT 651 SFGIFVTLDG IHIDGLVHIS DLGEDYFNFR
PEIMAIEGER SGIRFNMGDR 701 VAVRVARADL DDGKIDFVLI AGGSGRGRKV
KSSASAKPAG TAGKGKPKTA 751 AEKKTARGGK VRGRGASAAA ESRKKAKKPV
PIKVKKRKGK S* m988/a988 97.0% identity in 641 aa overlap 10 20 30
m988.pep TVLDIVERAQSKVVGRFYMDRGVAILEPED |||||||||||||||||
|||||||||||| a988
LYERQMRGIMHGDIVTVRPAGMDGRGRREGTVLDIVERAQSKVVGRFXMDRGVAILEPED 130
140 150 160 170 180 40 50 60 70 80 90 m988.pep
KRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a988
KRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA 190
200 210 220 230 240 100 110 120 130 140 150 m988.pep
VRKHHLPHQFSEACAKAAKKIPVHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| a988
VRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK 250
260 270 280 290 300 160 170 180 190 200 210 m988.pep
VGRNYRLVVAIADVSHYVRPDDVIDADAQERSTSVYFPRRVIPMLPENLSNGICSLNPDV
:|||||||||||||||||||||:||:|||||||||||||||||||||||||||||||| | a988
IGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTSVYFPRRVIPMLPENLSNGICSLNPHV 310
320 330 340 350 360 220 230 240 250 260 270 m988.pep
ERLCMVCDMVVTYAGNIKEYRFYPAVMRSHARLTYNQVWKWISDGIDHPYKAQIDTLYKL
||||:|||||:||||||||||||||||||||||||||||||:| ||:||:|:|||||||| a988
ERLCVVCDMVITYAGNIKEYRFYPAVMRSHARLTYNQVWKWLSGGIEHPFKIQIDTLYKL 370
380 390 400 410 420 280 290 300 310 320 330 m988.pep
FKILQKKRFERGAVEFESVETQMIFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF
||||||||||||||||:|:||||:|||||||||||||||||||||||||||||||||||| a988
FKILQKKRFERGAVEFDSIETQMLFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF 430
440 450 460 470 480 340 350 360 370 380 390 m988.pep
LLKNKHTALFRNHLGPTPEKLATLREQLGLLGLQLGGGDNPSPKDYAALVEQFKGRPDAE
||||||||||||||||||||||:||||||||||||||||||||||||||: ||||||||| a988
LLKNKHTALFRNHLGPTPEKLAALREQLGLLGLQLGGGDNPSPKDYAALAGQFKGRPDAE 490
500 510 520 530 540 400 410 420 430 440 450 m988.pep
LLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a988
LLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP 550
560 570 580 590 600 460 470 480 490 500 510 m988.pep
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a988
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDG 610
620 630 640 650 660 520 530 540 550 560 570 m988.pep
IHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLI
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a988
IHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLI 670
680 690 700 710 720 580 590 600 610 620 630 m988.pep
AGGSGRGRKVKSSASAKPAGTAGKGKPKTAAEKKTARGGKVRGRGASAAAESRKKAKKPV
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a988
AGGSGRGRKVKSSASAKPAGTAGKGKPKTAAEKKTARGGKVRGRGASAAAESRKKAKKPV 730
740 750 760 770 780 640 m988.pep PIKVKKRKGKSX |||||||||||| a988
PIKVKKRKGKSX 790
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2985>:
TABLE-US-03504 g989.seq 1 ATGACCCCTT TCACACTGAA AAAAACCGTC
CTGCTGCTCG GCACTGCCTT 51 TGCCGCCGCA TCTGTCCACG CATCCGGCTA
CCACTTCGGC ACACAGTCGG 101 TCAACGCGCA AAGCACGGCA AATGCCGCCG
ACGCGTCGAC CATCTTCTAC 151 AATCCCGCCG GCCTGACCAA ACTCGACAGC
AGCCAGATTT CCGTCAACGC 201 CAACATCGTG CTGCCCAGCA TTCATTATGA
AGCAGATTCC GCCACCGACT 251 TTACCGGGCT TCCCGTCCAA GGTTCTAAAA
ACGGCAAAAT CACCAAAACC 301 ACGGTCGCAC CCCACATTTA CGGCGCATAC
AAAGTCAACG ACAATCTGAC 351 CGTGGGCTTG GGCGTGTACG TCCCCTTCGG
CTCTGCCACC GAATACGAAA 401 AAGATTCCGT GTTGCGCCAC AACATCAACA
AACTCGGTCT GACCAGCATC 451 GCCGTCGAAC CTGTCGCCGC GTGGAAACTC
AACGAACGCC ATTCCTTCGG 501 CGCAGGCATC ATCGCCCAAC ATAATTCCGC
CGAACTGCGC AAATATGCCG 551 ACTGAGGAAT CCCAAAAAAA GCGCAAATGC
TGCAAGCAAC ACCTTCTAAT 601 CCTACTGCCG CTGCTCAAAT CAAGGCCGAC
GGACACGCCG ATGTCAAAGG 651 CAGCGATTGG GGCGTCGGCT ACCAACTGGC
GTGGATGTGG GACATCAACG 701 ACCGCGCGCG CGTGGGCGTG AACTACCGTT
CCAAAGTTTC ACACACGCTC 751 AAAGGCGATG CCGAATGGGC GGCAGACGGC
GCGGCGGCGA AACAACAGTG 801 GAATGACAAT ATGCTCACAC CGCTCGGTTA
CACGGCGAAT GAAAAAGCCA 851 GTGTCAAAAT CGTAACGCCT GAGTCTTTGT
CCGTACACGG CATGTACAAA 901 GTGTCCGACA AAGCCGACCT GTTCGGCGAC
GTAACTTGGA CGCGCCACAG 951 CCGCTTCAAT AAGGCGGAAC TGTTTTTTGA
AAAAGAAAAA AATATTGCTA 1001 ATGGCAAAAA ATCCGACCGC ACCACCATCA
CCCCCAACTG GCGCAACACC 1051 TACAAAGTCG GCTTGGGCGG TTCTTATCAA
ATCAGCGAAC CGCTGCAACT 1101 GCGCGTCGGC ATCGCTTTTG ACAAACCGCC
TGTCCGCAAC GCCGACTacC 1151 GCATGAACAG CCTGCCCGAC GGCAACCGCA
TCTGGTTCTC CGCCGGCATG 1201 AAATACCATA TCGGCAAAAA CCACGTCGTC
GATGCCGCCT ACACCCACAT 1251 CCACATCAAC GACACCAGCT ACCGCACGGC
GAAGGCAAGC GGCAACGATG 1301 TGGACAGCAA AGGTGCGTCT TGCGCACGTT
TCAAAAACCA CGCCGACATC 1351 ATCGGCCTGC AATACACCTA CAAATTCAAA TAA
This corresponds to the amino acid sequence <SEQ ID 2986; ORF
989.ng>:
TABLE-US-03505 g989.pep 1 MTPFTLKKTV LLLGTAFAAA SVHASGYHFG
TQSVNAQSTA NAADASTIFY 51 NPAGLTKLDS SQISVNANIV LPSIHYEADS
ATDFTGLPVQ GSKNGKITKT 101 TVAPHIYGAY KVNDNLTVGL GVYVPFGSAT
EYEKDSVLRH NINKLGLTSI 151 AVEPVAAWKL NERHSFGAGI IAQHNSAELR
KYAD*GIPKK AQMLQATPSN 201 PTAAAQIKAD GHADVKGSDW GVGYQLAWMW
DINDRARVGV NYRSKVSHTL 251 KGDAEWAADG AAAKQQWNDN MLTPLGYTAN
EKASVKIVTP ESLSVHGMYK 301 VSDKADLFGD VTWTRHSRFN KAELFFEKEK
NIANGKKSDR TTITPNWRNT 351 YKVGLGGSYQ ISEPLQLRVG IAFDKPPVRN
ADYRMNSLPD GNRIWFSAGM 401 KYHIGKNHVV DAAYTHIHIN DTSYRTAKAS
GNDVDSKGAS CARFKNHADI 451 IGLQYTYKFK *
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2987>:
TABLE-US-03506 m989.seq 1 ATGACCCCTT CCGCACTGAA AAAAACCGTC
CTGCTGCTCG GCACTGCCTT 51 TGCCGCCGCA TCCGTCCACG CATCCGGCTA
CCACTTCGGC ACACAGTCGG 101 TCAACGCGCA AAGCACGGCA AATGCCGCCG
CCGCAGAAGC CGCCGACGCA 151 TCGACCATCT TCTACAACCC TGCCGGCCTG
ACCAAACTCG ACAGCAGCCA 201 GATTTCCGTC AACGCCAACA TCGTGCTGCC
CAGCATTCAT TATGAGGCGG 251 ATTCCGCCAC CGACTTTACC GGGCTTCCCG
TCCAAGGTTC GAAAAGCGGC 301 AAAATCACCA AAACCACGGT CGCGCCCCAC
ATCTACGGCG CATACAAAGT 351 CAACGACAAT CTGACCGTGG GCTTGGGCGT
GTACGTCCCC TTCGGCTCTG 401 CCACCGAATA CGAAAAAGAT TCCGTGTTGC
GCCACAACAT CAACAAACTC 451 GGTCTGACCA GCATCGCCGT CGAACCTGTC
GCCGCGTGGA AACTCAACGA 501 CCGCCATTCC TTCGGCGCAG GCATCATCGC
CCAACATACT TCCGCCGAAC 551 TGCGCAAATA TGCCGACTGG GGGATTAAGA
GTAAAGCAGA GATATTGACG 601 GCAAAACCGC CCAAACCTAA CGGTGTAGCC
GAAGCTGCAA AAATTCAGGC 651 CGACGGACAC GCCGATGTCA AAGGCAGCGA
TTGGGGCTTC GGCTACCAAC 701 TGGCGTGGAT GTGGGACATC AACGACCGTG
CGCGCGTGGG CGTGAACTAC 751 CGTTCCAAAG TCTCGCACAC GCTCAAAGGC
GATGCCGAAT GGGCGGCAGA 801 CGGCGCGGCG GCGAAAGCAA TGTGGAGTAC
GATGCTTGCA GCAAACGGCT 851 ACACGGCGAA TGAAAAAGCC CGCGTTAAAA
TCGTTACGCC TGAGTCTTTG 901 TCCGTACACG GTATGTACAA AGTGTCCGAT
AAAGCCGACC TGTTCGGCGA 951 CGTAACTTGG ACGCGCCACA GCCGCTTCGA
TAAGGCGGAA CTGGTTTTTG 1001 AAAAAGAAAA AACCGTCGTC AAAGGCAAAT
CCGACCGCAC CACCATCACC 1051 CCCAACTGGC GCAACACCTA CAAAGTCGGC
TTCGGCGGTT CTTATCAAAT 1101 CAGCGAACCG CTGCAACTGC GCGCCGGCAT
CGCTTTTGAC AAATCGCCCG 1151 TCCGCAACGC CGACTACCGC ATGAACAGCC
TACCCGACGG CAACCGCATC 1201 TGGTTCTCCG CCGGTATGAA ATACCATATC
GGTAAAAACC ACGTCGTCGA 1251 TGCCGCCTAC ACCCACATCC ACATCAACGA
CACCAGCTAC CGCACGGCGA 1301 AGGCAAGCGG CAACGATGTG GACAGCAAAG
GCGCGTCTTC CGCACGTTTC 1351 AAAAACCACG CCGACATCAT CGGTCTGCAA
TACACCTACA AATTCAAATA 1401 A
This corresponds to the amino acid sequence <SEQ ID 2988; ORF
989>:
TABLE-US-03507 m989.pep 1 MTPSALKKTV LLLGTAFAAA SVHASGYHFG
TQSVNAQSTA NAAAAEAADA 51 STIFYNPAGL TKLDSSQISV NANIVLPSIH
YEADSATDFT GLPVQGSKSG 101 KITKTTVAPH IYGAYKVNDN LTVGLGVYVP
FGSATEYEKD SVLRHNINKL 151 GLTSIAVEPV AAWKLNDRHS FGAGIIAQHT
SAELRKYADW GIKSKAEILT 201 AKPPKPNGVA EAAKIQADGH ADVKGSDWGF
GYQLAWMWDI NDRARVGVNY 251 RSKVSHTLKG DAEWAADGAA AKAMWSTMLA
ANGYTANEKA RVKIVTPESL 301 SVHGMYKVSD KADLFGDVTW TRHSRFDKAE
LVFEKEKTVV KGKSDRTTIT 351 PNWRNTYKVG FGGSYQISEP LQLRAGIAFD
KSPVRNADYR MNSLPDGNRI 401 WFSAGMKYHI GKNHVVDAAY THIHINDTSY
RTAKASGNDV DSKGASSARF 451 KNHADIIGLQ YTYKFK*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae
TABLE-US-03508 g989/m989 90.0% identity in 468 aa overlap 10 20 30
40 50 g989.pep
MTPFTLKKTVLLLGTAFAAASVHASGYHFGTQSVNAQSTANAA-----DASTIFYNPAGL |||
:|||||||||||||||||||||||||||||||||||||| |||||||||||| m989
MTPSALKKTVLLLGTAFAAASVHASGYHFGTQSVNAQSTANAAAAEAADASTIFYNPAGL 10 20
30 40 50 60 60 70 80 90 100 110 g989.pep
TKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKNGKITKTTVAPHIYGAYKVNDN
||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||| m989
TKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKITKTTVAPHIYGAYKVNDN 70 80
90 100 110 120 120 130 140 150 160 170 g989.pep
LTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPVAAWKLNERHSFGAGIIAQHN
||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||: m989
LTVGLGVYVPFGSATEYEKDSVLRHNINKLGLISIAVEPVAAWKLNDRHSFGAGIIAQHT 130
140 150 160 170 180 180 190 200 210 220 230 g989.pep
SAELRKYADXGIPKKAQMLQATPSNPTA---AAQIKADGHADVKGSDWGVGYQLAWMWDI
||||||||| || :||::| | | :|:: ||:|:||||||||||||| |||||||||| m989
SAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQADGHADVKGSDWGFGYQLAWMWDI 190
200 210 220 230 240 240 250 260 270 280 290 g989.pep
NDRARVGVNYRSKVSHTLKGDAEWAADGAAAKQQWNDNMLTPLGYTANEKASVKIVTPES
|||||||||||||||||||||||||||||||| :|: :||: |||||||| |||||||| m989
NDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS-TMLAANGYTANEKARVKIVTPES 250
260 270 280 290 300 310 320 330 340 350 g989.pep
LSVHGMYKVSDKADLFGDVTWTRHSRFNKAELFFEKEKNIANGKKSDRTTITPNWRNTYK
|||||||||||||||||||||||||||:|||| |||||::::|| ||||||||||||||| m989
LSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKEKTVVKGK-SDRTTITPNWRNTYK 300
310 320 330 340 350 360 370 380 390 400 410 g989.pep
VGLGGSYQISEPLQLRVGIAFDKPPVRNADYRMNSLPDGNRIWFSAGMKYHIGKNHVVDA
||:|||||||||||||:|||||| |||||||||||||||||||||||||||||||||||| m989
VGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSLPDGNRIWFSAGMKYHIGKNHVVDA 360
370 380 390 400 410 420 430 440 450 460 g989.pep
AYTHIHINDTSYRTAKASGNDVDSKGASCARFKNHADIIGLQYTYKFKX
|||||||||||||||||||||||||||| |||||||||||||||||||| m989
AYTHIHINDTSYRTAKASGNDVDSKGASSARFKNHADIIGLQYTYKFKX 420 430 440 450
460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2989>:
TABLE-US-03509 a989.seq 1 ATGACCCCTT CCGCACTGAA AAAAACCGTC
CTACTGCTCG GCACTGCCTT 51 TGCCGCCGCA TCCGCACAAG CCTCCGGCTA
CCACTTCGGC ACACAGTCGG 101 TCAACGCGCA AAGCACGGCA AATGCCGCCG
CCGCAGAAGC CGCCGACGCA 151 TCGACCATCT TCTACAACCC TGCCGGCCTG
ACCAAACTCG ACAGCAGCCA 201 GATTTCCGTC AACGCCAACA TCGTGCTGCC
CAGCATTCAT TATGAGGCGG 251 ATTCCGCCAC CGACTTTACC GGGCTTCCCG
TCCAAGGTTC GAAAAGCGGC 301 AAAATCACCA AAACCACGGT CGCGCCCCAC
ATCTACGGCG CATACAAAGT 351 CAACGACAAT CTGACCGTAG GCTTGGGCGT
GTACGTCCCC TTCGGTTCTG 401 CCACCGAATA CGAAAAAGAT TCCGTGTTGC
GCCACAACAT CAACAAACTC 451 GGTCTGACCA GCATCGCCGT CGAACCTGTC
GCCGCGTGGA AACTCAACGA 501 ACGCCATTCC TTCGGCGCAG GCATCATCGC
CCAACATACT TCCGCCGAGC 551 TGCGCAAATA TGCCGACTGG GGGATTATGG
AAAAAGCGAA AGCACTAAAA 601 GAAACACCCC CCAATCCAAC TAAAGCCGCC
CAAATCAAAG CCGACGGACA 651 CGCCGATGTC AAAGGCAGCG ATTGGGGCTT
CGGCTACCAA CTGGCGTGGA 701 TGTGGGACAT CAACGACCGT GCGCGCGTGG
GCGTGAACTA CCGTTCCAAA 751 GTCTCACACA CGCTCAAAGG CGATGCCGAA
TGGGCGGCAG ACGACGCAAT 801 GGCGAAACAG TTATGGGATG CAAACAAACT
CGCACTGCTC GGCTACACGC 851 CAAGCGAAAA AGCCCGCGTT AAAATCGTTA
CGCCCGAGTC TTTGTCCGTA 901 CACGGTATGT ACAAAGTGTC CGACAAAGCC
GACCTGTTCG GCGACGTAAC 951 TTGGACGCGC CACAGCCGCT TCGATAAGGC
GGAACTGGTT TTTGAAAAAG 1001 AAAAAACCAT CGTCAACGGC AAATCCGACC
GCACCACCAT CACCCCCAAC 1051 TGGCGCAACA CCTACAAAGT CGGCTTCGGC
GGTTCTTATC AAATCAGCGA 1101 ACCGCTGCAA CTGCGCGCCG GCATCGCTTT
TGACAAATCG CCCGTCCGCA 1151 ACGCCGACTA CCGCATGAAC AGCCTGCCCG
ACGGCAACCG CATCTGGTTC 1201 TCCGCCGGCA TGAAATACCA TATCGGCAAA
AACCACGTCG TCGATGCCGC 1251 CTACACCCAC ATCCACATCA ACGACACCAG
CTACCGCACG GCGAAGGCAA 1301 GCGGCAACGA TGTGGACAGC AAAGGCGCGT
CTTCCGCACG TTTCAAAAAC 1351 CACGCCGACA TCATCGGCCT GCAATACACC
TACAAATTCA AATAA
This corresponds to the amino acid sequence <SEQ ID 2990; ORF
989.a>:
TABLE-US-03510 a989.pep 1 MTPSALKKTV LLLGTAFAAA SAQASGYHFG
TQSVNAQSTA NAAAAEAADA 51 STIFYNPAGL TKLDSSQISV NANIVLPSIH
YEADSATDFT GLPVQGSKSG 101 KITKTTVAPH IYGAYKVNDN LTVGLGVYVP
FGSATEYEKD SVLRHNINKL 151 GLTSIAVEPV AAWKLNERHS FGAGIIAQHT
SAELRKYADW GIMEKAKALK 201 ETPPNPTKAA QIKADGHADV KGSDWGFGYQ
LAWMWDINDR ARVGVNYRSK 251 VSHTLKGDAE WAADDAMAKQ LWDANKLALL
GYTPSEKARV KIVTPESLSV 301 HGMYKVSDKA DLFGDVTWTR HSRFDKAELV
FEKEKTIVNG KSDRTTITPN 351 WRNTYKVGFG GSYQISEPLQ LRAGIAFDKS
PVRNADYRMN SLPDGNRIWF 401 SAGMKYHIGK NHVVDAAYTH IHINDTSYRT
AKASGNDVDS KGASSARFKN 451 HADIIGLQYT YKFK* m989/a989 93.1% identity
in 467 aa overlap 10 20 30 40 50 60 m989.pep
MTPSALKKTVLLLGTAFAAASVHASGYHFGTQSVNAQSTANAAAAEAADASTIFYNPAGL
|||||||||||||||||||||::||||||||||||||||||||||||||||||||||||| a989
MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAAAEAADASTIFYNPAGL 10 20
30 40 50 60 70 80 90 100 110 120 m989.pep
TKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKITKTTVAPHIYGAYKVNDN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a989
TKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKITKTTVAPHIYGAYKVNDN 70 80
90 100 110 120 130 140 150 160 170 180 m989.pep
LTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPVAAWKLNDRHSFGAGIIAQHT
||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||| a989
LTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPVAAWKLNERHSFGAGIIAQHT 130
140 150 160 170 180 190 200 210 220 230 240 m989.pep
SAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQADGHADVKGSDWGFGYQLAWMWDI
|||||||||||| ||: | ||:|: :||:|:|||||||||||||||||||||||| a989
SAELRKYADWGIMEKAKALKETPPNPT---KAAQIKADGHADVKGSDWGFGYQLAWMWDI 190
200 210 220 230 250 260 270 280 290 299 m989.pep
NDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMW-STMLAANGYTANEKARVKIVTPES
||||||||||||||||||||||||||| | || :| :: || ||| :|||||||||||| a989
NDRARVGVNYRSKVSHTLKGDAEWAADDAMAKQLWDANKLALLGYTPSEKARVKIVTPES 240
250 260 270 280 290 300 310 320 330 340 350 359 m989.pep
LSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKEKTVVKGKSDRTTITPNWRNTYKV
|||||||||||||||||||||||||||||||||||||||:|:|||||||||||||||||| a989
LSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKEKTIVNGKSDRTTITPNWRNTYKV 300
310 320 330 340 350 360 370 380 390 400 410 419 m989.pep
GFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSLPDGNRIWFSAGMKYHIGKNHVVDAA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a989
GFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSLPDGNRIWFSAGMKYHIGKNHVVDAA 360
370 380 390 400 410 420 430 440 450 460 m989.pep
YTHIHINDTSYRTAKASGNDVDSKGASSARFKNHADIIGLQYTYKFKX
|||||||||||||||||||||||||||||||||||||||||||||||| a989
YTHIHINDTSYRTAKASGNDVDSKGASSARFKNHADIIGLQYTYKFKX 420 430 440 450
460
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2991>:
TABLE-US-03511 m990.seq 1 ATGTTCAGAG CTCAGCTTGG TTCAAATACT
CGTTCTACCA AAATCGGCGA 51 CGATGCCGAT TTTTCATTTT CAGACAAGCC
GAAACCCGGC ACTTCCCATT 101 ATTTTTCCAG CGGTAAAACC GATCAAAATT
CATCCGAATA TGGGTATGAC 151 GAAATCAATA TCCAAGGTAA AAATTACAAT
AGCGGCATCC TCGCCGTCGA 201 TAATATGCCC GTTGTCAAAA AATATATTAC
AGAGAAGTAT GGGGCTGATT 251 TAAAGCAGGC GGTTAAAAGT CAATTACAGG
ATTTATACAA AACAAGACCG 301 GAAGCTTGGG CAGAAAATAA AAAACGGACT
GAGGAGGCGT ATATAGCACA 351 GTTTGGAACA AAATTTAGTA CGCTCAAACA
GACGATGCCC GATTTAATTA 401 ATAAATTGGT AGAAGATTCC GTACTCACTC
CTCATAGTAA TACATCACAG 451 ACTAGTCTCA ACAACATCTT CAATAAAAAA
TTACACGTCA AAATCGAAAA 501 CAAATCCCAC GTCGCCGGAC AGGTGTTGGA
ACTGACCAAG ATGACGCTGA 551 AAGATTCCCT TTGGGAACCG CGCCGCCATT
CCGACATCCA TACGCTGGAA 601 ACTTCCGATA ATGCCCGCAT CCGCCTGAAC
ACGAAAGATG AAAAACTGAC 651 CGTCCATAAG GATTATGCGG GCGGCGCGGA
TTTCCTGTTC GGCTACGACG 701 TGCGGGAGTC GGACGAACCC GCCCTGACCT
TTGAAGACAA AGTCAGCGGA 751 CAATCCGGCG TGGTTTTGGA ACGCCGGCCG
GAAAATCTGA AAACGCTCGA 801 CGGGCGCAAA CTGATTGCGG CAAAAACGGC
GGATTCCGGT TCGTTTGCGT 851 TTAAACAAAA TTACCGGCAG GGACTGTACG
AATTATTGCT CAAGCAATGC 901 GAAGGCGGAT TTTGCTTGGG CGTGCAGCGT
TTGGCTATCC CCGAGGCGGA 951 AGCGGTTTTA TATGCCCAAC AGGCTTATGC
GGCAAATACT TTGTTTGGGC 1001 TGCGTGCCGC CGACAGGGGC GACGACGTGT
ATGCCGCCGA TCCGTCCCGT 1051 CAAAAATTGT GGCTGCGCTT CATCGGCGGC
CGGTCGCATC AAAATATACG 1101 GGGCGGCGCG GCTGCGGACG GGTGGCGCAA
AGGCGTGCAA ATCGGCGGCG 1151 AGGTGTTTGT ACGGCAAAAT GAAGGCAGCC
GACTGGCAAT CGGCGTGATG 1201 GGCGGCAGGG CCGGCCAGCA CGCATCAGTC
AACGGCAAAG GCGGTGCGGC 1251 AGGCAGTGAT TTGTATGGTT ATGGCGGGGG
TGTTTATGCT GCGTGGCATC 1301 AGTTGCGCGA TAAACAAACG GGTGCGTATT
TGGACGGCTG GTTGCAATAC 1351 CAACGTTTCA AACACCGCAT CAATGATGAA
AACCGTGCGG AACGCTACAA 1401 AACCAAAGGT TGGACGGCTT CTGTCGAAGG
CGGCTACAAC GCGCTTGTGG 1451 CGGAAGGCAT TGTCGGAAAA GGCAATAATG
TGCGGTTTTA CCTACAACCG 1501 CAGGCGCAGT TTACCTACTT GGGCGTAAAC
GGCGGCTTTA CCGACAGCGA 1551 GGGGACGGCG GTCGGACTGC TCGGCAGCGG
TCAGTGGCAA AGCCGCGCCG 1601 GCATTCGGGC AAAAACCCGT TTTGCTTTGC
GTAACGGTGT CAATCTTCAG 1651 CCTTTTGCCG CTTTTAATGT TTTGCACAGG
TCAAAATCTT TCGGCGTGGA 1701 AATGGACGGC GAAAAACAGA CGCTGGCAGG
CAGGACGGCA CTCGAAGGGC 1751 GGTTCGGTAT TGAAGCCGGT TGGAAAGGCC
ATATGTCCGC ACGCATCGGA 1801 TATGGCAAAA GGACGGACGG CGACAAAGAA
GCCGCATTGT CGCTCAAATG 1851 GCTGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2992; ORF
990>:
TABLE-US-03512 m990.pep 1 MFRAQLGSNT RSTKIGDDAD FSFSDKPKPG
TSHYFSSGKT DQNSSEYGYD 51 EINIQGKNYN SGILAVDNMP VVKKYITEKY
GADLKQAVKS QLQDLYKTRP 101 EAWAENKKRT EEAYIAQFGT KFSTLKQTMP
DLINKLVEDS VLTPHSNTSQ 151 TSLNNIFNKK LHVKIENKSH VAGQVLELTK
MTLKDSLWEP RRHSDIHTLE 201 TSDNARIRLN TKDEKLTVHK DYAGGADFLF
GYDVRESDEP ALTFEDKVSG 251 QSGVVLERRP ENLKTLDGRK LIAAKTADSG
SFAFKQNYRQ GLYELLLKQC 301 EGGFCLGVQR LAIPEAEAVL YAQQAYAANT
LFGLRAADRG DDVYAADPSR 351 QKLWLRFIGG RSHQNIRGGA AADGWRKGVQ
IGGEVFVRQN EGSRLAIGVM 401 GGRAGQHASV NGKGGAAGSD LYGYGGGVYA
AWHQLRDKQT GAYLDGWLQY 451 QRFKHRINDE NRAERYKTKG WTASVEGGYN
ALVAEGIVGK GNNVRFYLQP 501 QAQFTYLGVN GGFTDSEGTA VGLLGSGQWQ
SRAGIRAKTR FALRNGVNLQ 551 PFAAFNVLHR SKSFGVEMDG EKQTLAGRTA
LEGRFGIEAG WKGHMSARIG 601 YGKRTDGDKE AALSLKWLF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2993>:
TABLE-US-03513 a990.seq 1 ATGTTCAGAG CTCAGCTTGG TTCAAATACT
CGTTCTACCA AAATCGGCGA 51 CGATGCCGAT TTTTCATTTT CAGACAAGCC
GAAACCCGGC ACTTCCCATT 101 ATTTTTCCAG CGGTAAAACC GATCAAAATT
CATCCGAATA TGGGTATGAC 151 GAAATCAATA TCCAAGGTAA AAACTACAAT
AGCGGCATAC TCGCCGTCGA 201 TAATATGCCC GTTGTTAAGA AATATATTAC
AGATACTTAC GGGGATAATT 251 TAAAGGATGC GGTTAAGAAG CAATTACAGG
ATTTATACAA AACAAGACCC 301 GAAGCTTGGG AAGAAAATAA AAAACGGACT
GAGGAGGCGT ATATAGAACA 351 GCTTGGACCA AAATTTAGTA TACTCAAACA
GAAAAACCCC GATTTAATTA 401 ATAAATTGGT AGAAGATTCC GTACTCACTC
CTCATAGTAA TACATCACAG 451 ACTAGTCTCA ACAACATCTT CAATAAAAAA
TTACACGTCA AAATCGAAAA 501 CAAATCCCAC GTCGCCGGAC AGGTGTTGGA
ACTGACCAAG ATGACGCTGA 551 AAGATTCCCT TTGGGAACCG CGCCGCCATT
CCGACATCCA TATGCTGGAA 601 ACTTCCGATA ATGCCCGCAT CCGCCTGAAC
ACGAAAGATG AAAAACTGAC 651 CGTCCATAAA GCGTATCAGG GCGGTGCGGA
TTTCCTGTTC GGCTACGACG 701 TGCGGGAGTC GGACAAACCC GCCCTGACCT
TTGAAGAAAA AGTCAGCGGA 751 CAATCCGGCG TGGTTTTGGA ACGCCGGCCG
GAAAATCTGA AAACGCTCGA 801 CGGGCGCAAA CTGATTGCGG CGGAAAAGGC
AGACTCTAAT TCGTTTGCGT 851 TTAAACAAAA TTACCGGCAG GGACTGTACG
AATTATTGCT CAAGCAATGC 901 GAAGGCGGAT TTTGCTTGGG CGTGCAGCGT
TTGGCTATCC CCGAGGCGGA 951 AGCGGTTTTA TATGCCCAAC AGGCTTATGC
GGCAAATACT TTGTTCGGGC 1001 TGCGTGCCGC CGACAGGGGC GACGACGTGT
ATGCCGCCGA TCCGTCCCGT 1051 CAAAAATTGT GGCTGCGCTT CATCGGCGGC
CGGTCGCATC AAAATATACG 1101 GGGCGGCGCG GCTGCGGACG GGCGGCGCAA
AGGCGTGCAA ATCGGCGGCG 1151 AGGTGTTTGT ACGGCAAAAT GAAGGCAGCC
GGCTGGCAAT CGGCGTGATG 1201 GGCGGCAGGG CTGGCCAGCA CGCATCAGTC
AACGGCAAAG GCGGTGCGGC 1251 AGGCAGTTAT TTGCATGGTT ATGGCGGGGG
TGTTTATGCT GCGTGGCATC 1301 AGTTGCGCGA TAAACAAACG GGTGCGTATT
TGGACGGCTG GTTGCAATAC 1351 CAACGTTTCA AACACCGCAT CAATGATGAA
AACCGTGCGG AACGCTACAA 1401 AACCAAAGGT TGGACGGCTT CTGTCGAAGG
CGGCTACAAC GCGCTTGTGG 1451 CGGAAGGCGT TGTCGGAAAA GGCAATAATG
TGCGGTTTTA CCTGCAACCG 1501 CAGGCGCAGT TTACCTACTT GGGCGTAAAC
GGCGGCTTTA CCGACAGCGA 1551 GGGGACGGCG GTCGGACTGC TCGGCAGCGG
TCAGTGGCAA AGCCGCGCCG 1601 GCATTCGGGC AAAAACCCGT TTTGCTTTGC
GTAACGGTGT CAATCTTCAG 1651 CCTTTTGCCG CTTTTAATGT TTTGCACAGG
TCAAAATCTT TCGGCGTGGA 1701 AATGGACGGC GAAAAACAGA CGCTGGCAGG
CAGGACGGCG CTCGAAGGGC 1751 GGTTCGGCAT TGAAGCCGGT TGGAAAGGCC
ATATGTCCGC ACGCATCGGA 1801 TACGGCAAAA GGACGGACGG CGACAAAGAA
GCCGCATTGT CGCTCAAATG 1851 GCTGTTTTGA
This corresponds to the amino acid sequence <SEQ ID 2994; ORF
990.a>:
TABLE-US-03514 a990.pep 1 MFRAQLGSNT RSTKIGDDAD FSFSDKPKPG
TSHYFSSGKT DQNSSEYGYD 51 EINIQGKNYN SGILAVDNMP VVKKYITDTY
GDNLKDAVKK QLQDLYKTRP 101 EAWEENKKRT EEAYIEQLGP KFSILKQKNP
DLINKLVEDS VLTPHSNTSQ 151 TSLNNIFNKK LHVKIENKSH VAGQVLELTK
MTLKDSLWEP RRHSDIHMLE 201 TSDNARIRLN TKDEKLTVHK AYQGGADFLF
GYDVRESDKP ALTFEEKVSG 251 QSGVVLERRP ENLKTLDGRK LIAAEKADSN
SFAFKQNYRQ GLYELLLKQC 301 EGGFCLGVQR LAIPEAEAVL YAQQAYAANT
LFGLRAADRG DDVYAADPSR 351 QKLWLRFIGG RSHQNIRGGA AADGRRKGVQ
IGGEVFVRQN EGSRLAIGVM 401 GGRAGQHASV NGKGGAAGSY LHGYGGGVYA
AWHQLRDKQT GAYLDGWLQY 451 QRFKHRINDE NRAERYKTKG WTASVEGGYN
ALVAEGVVGK GNNVRFYLQP 501 QAQFTYLGVN GGFTDSEGTA VGLLGSGQWQ
SRAGIRAKTR FALRNGVNLQ 551 PFAAFNVLHR SKSFGVEMDG EKQTLAGRTA
LEGRFGIEAG WKGHMSARIG 601 YGKRTDGDKE AALSLKWLF* m990/a990 96.0%
identity in 619 aa overlap 10 20 30 40 50 60 m990.pep
MFRAQLGSNTRSTKIGDDADFSFSDKPKPGTSHYFSSGKTDQNSSEYGYDEINIQGKNYN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a990
MFRAQLGSNTRSTKIGDDADFSFSDKPKPGTSHYFSSGKTDQNSSEYGYDEINIQGKNYN 10 20
30 40 50 60 70 80 90 100 110 120 m990.pep
SGILAVDNMPVVKKYITEKYGADLKQAVKSQLQDLYKTRPEAWAENKKRTEEAYIAQFGT
|||||||||||||||||: || :||:|||:||||||||||||| ||||||||||| |:| a990
SGILAVDNMPVVKKYITDTYGDNLKDAVKKQLQDLYKTRPEAWEENKKRTEEAYIEQLGP 70 80
90 100 110 120 130 140 150 160 170 180 m990.pep
KFSTLKQTMPDLINKLVEDSVLTPHSNTSQTSLNNIFNKKLHVKIENKSHVAGQVLELTK |||
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| a990
KFSILKQKNPDLINKLVEDSVLTPHSNTSQTSLNNIFNKKLHVKIENKSHVAGQVLELTK 130
140 150 160 170 180 190 200 210 220 230 240 m990.pep
MTLKDSLWEPRRHSDIHTLETSDNARIRLNTKDEKLTVHKDYAGGADFLFGYDVRESDEP
||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||:| a990
MTLKDSLWEPRRHSDIHMLETSDNARIRLNTKDEKLTVHKAYQGGADFLFGYDVRESDKP 190
200 210 220 230 240 250 260 270 280 290 300 m990.pep
ALTFEDKVSGQSGVVLERRPENLKTLDGRKLIAAKTADSGSFAFKQNYRQGLYELLLKQC
|||||:||||||||||||||||||||||||||||: |||:|||||||||||||||||||| a990
ALTFEEKVSGQSGVVLERRPENLKTLDGRKLIAAEKADSNSFAFKQNYRQGLYELLLKQC 250
260 270 280 290 300 310 320 330 340 350 360 m990.pep
EGGFCLGVQRLAIPEAEAVLYAQQAYAANTLFGLRAADRGDDVYAADPSRQKLWLRFIGG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a990
EGGFCLGVQR LAIPEAEAVL YAQQAYAANT LFGLRAADRG DDVYAADPSR QKLWLRFIGG
310 320 330 340 350 360 370 380 390 400 410 420 m990.pep
RSHQNIRGGAAADGWRKGVQIGGEVFVRQNEGSRLAIGVMGGRAGQHASVNGKGGAAGSD
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| a990
RSHQNIRGGAAADGRRKGVQIGGEVFVRQNEGSRLAIGVMGGRAGQHASVNGKGGAAGSY 370
380 390 400 410 420 430 440 450 460 470 480 m990.pep
LYGYGGGVYAAWHQLRDKQTGAYLDGWLQYQRFKHRINDENRAERYKTKGWTASVEGGYN
|:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a990
LHGYGGGVYAAWHQLRDKQTGAYLDGWLQYQRFKHRINDENRAERYKTKGWTASVEGGYN 430
440 450 460 470 480 490 500 510 520 530 540 m990.pep
ALVAEGIVGKGNNVRFYLQPQAQFTYLGVNGGFTDSEGTAVGLLGSGQWQSRAGIRAKTR
||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| a990
ALVAEGVVGKGNNVRFYLQPQAQFTYLGVNGGFTDSEGTAVGLLGSGQWQSRAGIRAKTR 490
500 510 520 530 540 550 560 570 580 590 600 m990.pep
FALRNGVNLQPFAAFNVLHRSKSFGVEMDGEKQTLAGRTALEGRFGIEAGWKGHMSARIG
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| a990
FALRNGVNLQPFAAFNVLHRSKSFGVEMDGEKQTLAGRTALEGRFGIEAGWKGHMSARIG 550
560 570 580 590 600 610 620 m990.pep YGKRTDGDKEAALSLKWLFX
|||||||||||||||||||| a990 YGKRTDGDKE AALSLKWLFX 610 620
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 2995>:
TABLE-US-03515 g992.seq 1 ATGTTCAGAC GGCATCGGCA TTTGAAAAAT
ATGCAGATTA AAAAAATCAT 51 GAAATGGCTT CCCGTCGCCC TGTCGCTTTT
GGGCGCGTTG GGTTATACGG 101 GATATGACAG TGAGGCGGTG CGGACGGCGG
TTGCCGTACT CGACGTACTC 151 GGCACTGCAG GGGACGTGGG TTTCGACGCG
CCCGTTCGCC GACGGGCATC 201 GGCGAAATCC GGCCACAGCT ACACAGGCAC
GGTGTCCAAA GTCTATGACG 251 GCGATACCCT TCACGTCATC GACGGCGACG
GCGCGAAACA TAAAATTCGG 301 ATGGCGTATA TCGACGCACC GGAGATGAAA
CAGGCTTACG GTACACGTTC 351 GCGCGACAAC CTGCGCGCGG CGGCGGAGGG
TAGGAAAGTC AGTGTACGTG 401 TGTTTGAAAC CGACCGCTAT CAGCGCGAAG
TGGCGCAGGT ATCCGCCGGC 451 AAAACCGATT TGAACCTGAT GCAGGTGCAG
GACGGGGCGG CGTGGCATTA 501 TAAAAGTTAT GCTAAAGAAC AGCAGGATAA
GGCGGATTTT GCCGACTATG 551 CCGACGCTCA AATTCAGGCG GAAAGGGAAC
GCAAAGGATT GTGGAAAGCT 601 AAAAATCCGC AAGCGCCGTG GGCGTACCGC
CGGGCAGGCA GGAGCGGCGG 651 GGGCAATAAG GATTGGATGG ATTCCGTGGG
CGAATGGTTG GGCATTTGGT 701 AA
This corresponds to the amino acid sequence <SEQ ID 2996 ORF
992.ng>:
TABLE-US-03516 g992.pep 1 MFRRHRHLKN MQIKKIMKWL PVALSLLGAL
GYTGYDSEAV RTAVAVLDVL 51 GTAGDVGFDA PVRRRASAKS GHSYTGTVSK
VYDGDTLHVI DGDGAKHKIR 101 MAYIDAPEMK QAYGTRSRDN LRAAAEGRKV
SVRVFETDRY QREVAQVSAG 151 KTDLNLMQVQ DGAAWHYKSY AKEQQDKADF
ADYADAQIQA ERERKGLWKA 201 KNPQAPWAYR RAGRSGGGNK DWMDSVGEWL GIW*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2997>:
TABLE-US-03517 m992.seq 1 ATGTTCAGAC GGCATCGGCA TTTGAAAAAT
ATGCAGATTA AAAAAATCAT 51 GAAATGGCTT CCCGTCGCCC TGTCGCTTTT
GGGTGCGTTG GGTTATACGG 101 GGTACGGCAG CGAGGCGGTG CGGACGGCGG
TTGCCGTACT CGACGTACTC 151 GGCGCGGCAG GGGACGCGGG TTCCGACGCG
CCCGCCCGCC GCCGAGCATC 201 GGCGAAATCC GGCCACCGCT ACACAGGCAC
GGTGTCCAAA GTCTATGACG 251 GCGACACCCT TCACGTTATC GACGGCGACG
GCGCGAAACA CAAAATCCGG 301 ATGGCGTATA TCGACGCGCC GGAGATGAAA
CAGGCTTACG GCACGCGTTC 351 GCGCGACAAC CTGCGCGCGG CGGCGGAAGG
CAGGAAAGTC AGCGTGCGCG 401 TGTTCGATAC CGACCGCTAC CAGCGCGAAG
TGGCGCAGGT TTCTGTCGGC 451 AAAACCGATT TGAACCTGAT GCAGGTGCAG
GACGGGGCGG CGTGGCATTA 501 TAAAAGTTAT GCTAAAGAAC AGCAGGATAA
GGCGGATTTT GCCGATTATG 551 CCGACGCTCA AATTCAGGCG GAAAGGGAAC
GCAAAGGATT GTGGAAAGCT 601 AAAAATCCGC AAGCGCCGTG GGCGTACCGC
CGAGCAGGCA GGAGCGGCGG 651 GGGCAATAAG GATTGGATGG ATGCCGTGGG
CGAATGGTTG GGCATTTGGT 701 AA
This corresponds to the amino acid sequence <SEQ ID 2998; ORF
992>:
TABLE-US-03518 m992.pep 1 MFRRHRHLKN MQIKKIMKWL PVALSLLGAL
GYTGYGSEAV RTAVAVLDVL 51 GAAGDAGSDA PARRRASAKS GHRYTGTVSK
VYDGDTLHVI DGDGAKHKIR 101 MAYIDAPEMK QAYGTRSRDN LRAAAEGRKV
SVRVFDTDRY QREVAQVSVG 151 KTDLNLMQVQ DGAAWHYKSY AKEQQDKADF
ADYADAQIQA ERERKGLWKA 201 KNPQAPWAYR RAGRSGGGNK DWMDAVGEWL GIW*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 992
shows 96.1% identity over a 233 aa overlap with a predicted ORF
(ORF 992) from N. gonorrhoeae
TABLE-US-03519 m992/g992 96.1% identity in 233 aa overlap 10 20 30
40 50 60 m992.pep
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAGDAGSDA
||||||||||||||||||||||||||||||||||| |||||||||||||||:|||:| || g992
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYDSEAVRTAVAVLDVLGTAGDVGFDA 10 20
30 40 50 60 70 80 90 100 110 120 m992.pep
PARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQAYGTRSRDN
|:|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| g992
PVRRRASAKSGHSYLGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQAYGTRSRDN 70 80
90 100 110 120 130 140 150 160 170 180 m992.pep
LRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSYAKEQQDKADF
|||||||||||||||:||||||||||||:||||||||||||||||||||||||||||||| g992
LRAAAEGRKVSVRVFETDRYQREVAQVSAGKTDLNLMQVQDGAAWHYKSYAKEQQDKADF 130
140 150 160 170 180 190 200 210 220 230 m992.pep
ADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGEWLGIWX
||||||||||||||||||||||||||||||||||||||||||||:||||||||| g992
ADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDSVGEWLGIWX 190 200 210
220 230
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 2999>:
TABLE-US-03520 a992.seq 1 ATGTTCAGAC GGCATCGGCA TTTGAAAAAT
ATGCAGATTA AAAAAATCAT 51 GAAATGGCTT CCCGTCGCCT TGTCGCTTTT
GGGTGCGTTG GGTTATACGG 101 GGTACGGCAG CGAGGCGGTG CGGACGGCGG
TTGCCGTACT CGACGTACTC 151 GGCGCGGCAG GGGACGCGGG TTCCGACGCG
CCCGCCCGCC GCCGAGCATC 201 GGCGAAATCC GGCCACCGCT ACACAGGCAC
GGTGTCCAAA GTCTATGACG 251 GCGACACCCT TCACGTTATC GACGGCGACG
GCGCGAAACA CAAAATCCGG 301 ATGGCGTATA TCGACGCGCC GGAGATGAAA
CAGGCTTACG GCACGCGTTC 351 GCGCGACAAC CTGCGCGCGG CGGCGGAAGG
CAGGAAAGTC AGCGTCCGCG 401 TGTTCGACAC CGACCGCTAC CAGCGCGAAG
TGGCGCAGGT TTCTGTCGGC 451 AAAACCGATT TGAACCTGAT GCAGGTGCAG
GACGGGGCGG CGTGGCATTA 501 TAAAAGTTAT GCTAAAGAAC AGCAGGATAA
GGCGGATTTT GCCGATTATG 551 CCGACGCTCA AATTCAGGCG GAAAGGGAAC
GCAAAGGATT GTGGAAAGCT 601 AAAAATCCGC AAGCGCCGTG GGCGTACCGC
CGGGCAGGCA GGAGCGGCGG 651 GGGCAATAAG GATTGGATGG ATGCCGTGGG
CGAATGGTTG GGCATTTGGT 701 AA
This corresponds to the amino acid sequence <SEQ ID 3000; ORF
992.a>:
TABLE-US-03521 a992.pep 1 MFRRHRHLKN MQIKKIMKWL PVALSLLGAL
GYTGYGSEAV RTAVAVLDVL 51 GAAGDAGSDA PARRRASAKS GHRYTGTVSK
VYDGDTLHVI DGDGAKHKIR 101 MAYIDAPEMK QAYGTRSRDN LRAAAEGRKV
SVRVFDTDRY QREVAQVSVG 151 KTDLNLMQVQ DGAAWHYKSY AKEQQDKADF
ADYADAQIQA ERERKGLWKA 201 KNPQAPWAYR RAGRSGGGNK DWMDAVGEWL GIW*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 992
shows 100.0% identity over a 233 aa overlap with a predicted ORF
(ORF 992) from N. meningitidis
TABLE-US-03522 a992/m992 100.0% identity in 233 aa overlap 10 20 30
40 50 60 a992.pep
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAGDAGSDA
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m992
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAGDAGSDA 10 20
30 40 50 60 70 80 90 100 110 120 a992.pep
PARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQAYGTRSRDN
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m992
PARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQAYGTRSRDN 70 80
90 100 110 120 130 140 150 160 170 180 a992.pep
LRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSYAKEQQDKADF
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m992
LRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSYAKEQQDKADF 130
140 150 160 170 180 190 200 210 220 230 a992.pep
ADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGEWLGIWX
|||||||||||||||||||||||||||||||||||||||||||||||||||||| m992
ADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGEWLGIWX 190 200 210
220 230
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3001>:
TABLE-US-03523 g993.seq 1 CTGAAAGTCG TATTGGGCAG TTTTCAAGGC
CCTTTGGATC TGCTGCTCTA 51 CCTTATCCGC AAGCAGAACA TCGATGTTCT
CGATATTCCG ATGGTGGAAA 101 TTACCGGGCA GTATCTGCAC TATATTGCCC
AAATGGAAGC CTATCAGTTT 151 GATTTGGCGG CGGAATATCT TTTGATGGCG
GCAATGCTGA TTGAAATCAA 201 ATCGCGCCTG CTGCTGCCGC GTACCGAAGC
CGTCGAAGAC GAAGAGGCCG 251 ACCCGCGTGC CGAGTTGGTG CGCCGTCTGC
TTGCCTACGA GCAAATGAAA 301 CTGGCGGCGC AGGGTTTGGA CGCGCTGCCG
CGTGCGGGAC GGGATTTCGC 351 GTGGGCTTAC CTGCCGCTGG AAATTGCAGC
CGAGACGAAG CTGCCCGAGG 401 TTTACATCGC CGATTTGATG CAGGCATGGT
TGGGCATTCT TTCTCGGGCA 451 AAACATACGC GCAGCCACGA AGTAATCCAA
GAAACCCTTT CCGTGCGCGC 501 GCAAATGACG GCAATCCTGC GCCGTTTGAA
CGAACACGGG ATATGCAGGT 551 TTCACGCCCT GTTCAATCCC GAACAGGGCG
CGGCTTACGT GATCGTCAAC 601 TTCATCGCCC TGTTGGAGCT TGCCAAAGAA
GGATTGGTCG GAATCGTACA 651 GGAAGACGGT TTCGGAGAAA TCCGAATCAG
CCTCAATCAT GAGGGGGCGC 701 ATTCAGACGG CATTTTCGGC ACACGGGGCG
GGCGCGATGT GTTCTAA
This corresponds to the amino acid sequence <SEQ ID 3002 ORF
993.ng>:
TABLE-US-03524 g993.pep 1 LKVVLGSFQG PLDLLLYLIR KQNIDVLDIP
MVEITGQYLH YIAQMEAYQF 51 DLAAEYLLMA AMLIEIKSRL LLPRTEAVED
EEADPRAELV RRLLAYEQMK 101 LAAQGLDALP RAGRDFAWAY LPLEIAAETK
LPEVYIADLM QAWLGILSRA 151 KHTRSHEVIQ ETLSVRAQMT AILRRLNEHG
ICRFHALFNP EQGAAYVIVN 201 FIALLELAKE GLVGIVQEDG FGEIRISLNH
EGAHSDGIFG TRGGRDVF*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3003>:
TABLE-US-03525 m993.seq 1 TTGAAAGTCG TATTGGGCAG CTTCCAAGGC
CCTTTGGATC TACTGCTGTA 51 TCTGATCCGC AAACAGAATA TCGACGTACT
GGATATTCCG ATGGTGAAGA 101 TTACCGAGCA GTATCTGCAC TACATCGCCC
AAATAGAAAC CTATCAGTTT 151 GATTTGGCGG CGGAATATCT TTTGATGGCA
GCAATGCTGA TTGAAATCAA 201 ATCGCGCCTG CTGCTGCCGC GTACCGAAAC
CGTCGAAGAC GAAGAAGCCG 251 ACCCGCGTGC CGAGTTGGTG CGCCGCCTGC
TGGCTTACGA ACAGATGAAG 301 CTGGCGGCGC AGGGTTTGGA CGCGCTGCCC
CGAGCCGGAC GGGATTTCGC 351 GTGGGCTTAC CTGCCGCTGG AAATTGCCGT
CGAAGCCAAG CTGCCCGAAG 401 TCTATATTAC CGACTTGACG CAAGCGTGGC
TGGGTATTTT GTCTCGGGCA 451 AAACACACGC GCAGCCACGA AGTAATCAAA
GAAACCATCT CCGTGCGCGC 501 GCAAATGACG GCAATCCTGC GCCGTTTGAA
CGGACACGGA ATATGCAGGT 551 TTCACGACCT GTTCAATCCC AAACAGGGCG
CGGCTTACGT GGTCGTCAAC 601 TTCATCGCAC TGTTGGAGCT TGCCAAAGAA
GGATTGGTCA GAATCGTGCA 651 GGAAGACGGT TTCGGAGAAA TCCGAATCAG
CCTCAATCAT GAGGGGGCGC 701 ATTCAGACGG CATTTCCGGC ACACGAGGCG
GGCGCGATGT GTTCTAA
This corresponds to the amino acid sequence <SEQ ID 3004; ORF
993>:
TABLE-US-03526 m993.pep 1 LKVVLGSFQG PLDLLLYLIR KQNIDVLDIP
MVKITEQYLH YIAQIETYQF 51 DLAAEYLLMA AMLIEIKSRL LLPRTETVED
EEADPRAELV RRLLAYEQMK 101 LAAQGLDALP RAGRDFAWAY LPLEIAVEAK
LPEVYITDLT QAWLGILSRA 151 KHTRSHEVIK ETISVRAQMT AILRRLNGHG
ICRFHDLFNP KQGAAYVVVN 201 FIALLELAKE GLVRIVQEDG FGEIRISLNH
EGAHSDGISG TRGGRDVF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 993
shows 93.1% identity over a 248 aa overlap with a predicted ORF
(ORF 993) from N. gonorrhoeae
TABLE-US-03527 m993/g993 93.1% identity in 248 aa overlap 10 20 30
40 50 60 m993.pep
LKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMA
||||||||||||||||||||||||||||||||:|| ||||||||:|:||||||||||||| g993
LKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVEITGQYLHYIAQMEAYQFDLAAEYLLMA 10 20
30 40 50 60 70 80 90 100 110 120 m993.pep
AMLIEIKSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAY
||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||| g993
AMLIEIKSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAY 70 80
90 100 110 120 130 140 150 160 170 180 m993.pep
LPLEIAVEAKLPEVYILDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHG
||||||:|:|||||||:|| |||||||||||||||||||:||:|||||||||||||| || g993
LPLEIAAETKLPEVYIADLMQAWLGILSRAKHTRSHEVIQELLSVRAQMTAILRRLNEHG 130
140 150 160 170 180 190 200 210 220 230 240 m993.pep
ICRFHDLFNPKQGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRISLNHEGAHSDGISG |||||
||||:||||||:||||||||||||||| |||||||||||||||||||||||| | g993
ICRFHALFNPEQGAAYVIVNFIALLELAKEGLVGIVQEDGFGEIRISLNHEGAHSDGIFG 190
200 210 220 230 240 249 m993.pep TRGGRDVFX ||||||||| g993
TRGGRDVFX
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3005>:
TABLE-US-03528 a993.seq 1 CTGAAAGTCG TATTGAGCAG TTTTCAAGGC
CCTTTGGATC TGCTGCTCTA 51 CCTTATCCGC AAGCAGAACA TCGATGTTCT
CGATATTCCG ATGGTGAAGA 101 TTACCGAACA GTATCTGCAC TACATCGCCC
AAATAGAAAC CTATCAGTTT 151 GATTTGGCGG CGGAATATCT TTTGATGGCA
GCAATGCTGA TTGAAATCAA 201 ATCGCGCCTG CTGCTGCCGC GTACCGAAAC
CGTCGAAGAC GAAGAAGCCG 251 ACCCGCGTGC CGAGTTGGTG CGCCGCCTGC
TGGCTTACGA GCAGATGAAG 301 CTGGCGGCAC AAGGGTTGGA TGCGCTTCCT
CGTGCGGGCC GGGATTTCGC 351 ATGGGCATAC CTGCCACTGG AAATTGCCGT
CGAAGCCAAG CTGCCCGAAG 401 TCTATATTAC CGACTTGACG CAGGCGTGGC
TGAGTATTTT GTCTCGGGCA 451 AAACATACGC GCAGCCACGA AGTTATCAAA
GAAACCATCT CCGTGCGCGC 501 GCAAATGACG GCAATCCTGC GCCGTTTGAA
CAAACACGGG ATATGCAGGT 551 TTCACGACCT GTTCAATCCC GAACAGGGCG
CGGCTTACGT GGTCGTCAAC 601 TTCATCGCAC TGTTGGAGCT TGCCAAAGAA
GGTTTGGTCG GAATCGTACA 651 GGAAGTCGGT TTCGGAGAAA TCCGAATCAG
CCTCAATCAT GAGGGGGCGC 701 ATTCAGACGG CATTTCCGGC ACACGGGGCG
GGCGCGATGT GTTCTAA
This corresponds to the amino acid sequence <SEQ ID 3006; ORF
993.a>:
TABLE-US-03529 a993.pep 1 LKVVLSSFQG PLDLLLYLIR KQNIDVLDIP
MVKITEQYLH YIAQIETYQF 51 DLAAEYLLMA AMLIEIKSRL LLPRTETVED
EEADPRAELV RRLLAYEQMK 101 LAAQGLDALP RAGRDFAWAY LPLEIAVEAK
LPEVYITDLT QAWLSILSRA 151 KHTRSHEVIK ETISVRAQMT AILRRLNKHG
ICRFHDLFNP EQGAAYVVVN 201 FIALLELAKE GLVGIVQEVG FGEIRISLNH
EGAHSDGISG TRGGRDVF*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 993
shows 97.6% identity over a 248 aa overlap with a predicted ORF
(ORF 993) from N. meningitidis
TABLE-US-03530 a993/m993 97.6% identity in 248 aa overlap 10 20 30
40 50 60 a993.pep
LKVVLSSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMA
|||||:||||||||||||||||||||||||||||||||||||||||||||||||||||| | m993
LKVVLGSFQGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMA 10 20
30 40 50 60 70 80 90 100 110 120 a993.pep
AMLIEIKSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAY
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m993
AMLIEIKSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAY 70 80
90 100 110 120 130 140 150 160 170 180 a993.pep
LPLEIAVEAKLPEVYILDLTQAWLSILSRAKHTRSHEVIKETISVRAQMTAILRRLNKHG
||||||||||||||||||||||||:|||||||||||||||||||||||||||||||| || m993
LPLEIAVEAKLPEVYILDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHG 130
140 150 160 170 180 190 200 210 220 230 240 a993.pep
ICRFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
||||||||||:|||||||||||||||||||||| |||| ||||||||||||||||||||| m993
ICRFHDLFNPKQGAAYVVVNFIALLELAKEGLVRIVQEDGFGEIRISLNHEGAHSDGISG 190
200 210 220 230 240 249 a993.pep TRGGRDVFX ||||||||| m993
TRGGRDVFX
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3007>:
TABLE-US-03531 g996.seq 1 ATGAACAGAA GAACCTTCCT CCTCGGCGCA
GGCGCGTTGC TTCTTACCGC 51 CTGCGGCAGA AAATCCGCCC GAACCCACGC
CAAAATTCCC GAAGGAAGCA 101 CCGTGCTTGC CTTGGGCGAT TCGCTCACCT
TCGGCTACGG AGCAAACCCC 151 GGCGAATCCT ACCCCGCGCA ACTGCAAAAA
CTGACGGGTT GGAATATTGT 201 CAACGGCGGC GTATCGGGCG ATACGTCCGC
GCAAGCCCTA TCGCGCCTGC 251 CCGCGCTGTT GGCACGCAAA CCCAAGCTTG
TGATTGTCGG CATAGGCGGC 301 AACGACTTTC TGCGCAAAGT TCCCGAGGAG
CAGACCCGCG CCAATATCGC 351 GAAAATCATC GAAACCGTGC AAAAGGAAAA
CATTCCCGCC GTCCTCGTCG 401 GCGTGCCGCA CATCACACTG GGCGCGTTGT
TCGGGCATTT GAGCGACCAT 451 CCGCTGTATG AGGATTTGTC CGAGGAATAC
GGCATTCCGT TGTTCGGCGG 501 CGCGTGGGCG GAAATTTTGG GCAATAATAA
TCTGAAATCC GACCAAATCC 551 ACGCCAACGG CAAAGGCTAT CGGAAATTCG
CCGAAAATTT GAATCAATTT 601 TTGAGAAAAC ATGGGTTTAG ATAA
This corresponds to the amino acid sequence <SEQ ID 3008 ORF
996.ng>:
TABLE-US-03532 g996.pep 1 MNRRTFLLGA GALLLTACGR KSARTHAKIP
EGSTVLALGD SLTFGYGANP 51 GESYPAQLQK LTGWNIVNGG VSGDTSAQAL
SRLPALLARK PKLVIVGIGG 101 NDFLRKVPEE QTRANIAKII ETVQKENIPA
VLVGVPHITL GALFGHLSDH 151 PLYEDLSEEY GIPLFGGAWA EILGNNNLKS
DQIHANGKGY RKFAENLNQF 201 LRKHGFR*
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3009>:
TABLE-US-03533 m996.seq 1 ATGAACAGAA GAACCTTCCT CCTCGGCGCA
GGCGCGTTGC TGCTTACCGC 51 CTGCGGCAGA AAATCCGCCC GAACCCACGC
CAAAATTCCC GAAGGAAGCA 101 CCGTACTTGC CTTGGGCGAT TCGCTTACCT
TCGGCTACGG CGCAAACCCT 151 GGCGAATCCT ACCCCGCGCA ACTGCAAAAA
CTGACGGGTT GGAATATTGT 201 CAACGGCGGC GTATCGGGCG ATACATCTGC
CCAAGCCCTG TCGCGCCTGC 251 CCGCGCTGTT GGCACGCAAA CCCAAGCTTG
TGATTGTCGG CATAGGCGGC 301 AACGACTTTC TGCGCAAAGT TCCCAAGGAG
CAGACCCGCG CCAATATCGC 351 GAAAATCATC GAAACCGTGC AGAAGGAAAA
CATCCCCGCC GTCCTCGTCG 401 GCGTGCCGCA CATCACACTG GGTGCGTTGT
TCGGGCATTT GAGCGATCAT 451 CCGCTGTATG AGGATTTGTC CGAGGAATAC
GGCATTCCGC TGTTCGGCGG 501 CGCGTGGGCG GAAATTTTGG GCGATAATAA
TCTGAAATCC GACCAAATCC 551 ACGCCAACGG CAAAGGCTAT CGGAAATTTG
CCGAAGATTT GAATCAATTT 601 TTGAGAAAAC AGGGGTTTAG ATAA
This corresponds to the amino acid sequence <SEQ ID 3010; ORF
996>:
TABLE-US-03534 m996.pep 1 MNRRTFLLGA GALLLTACGR KSARTHAKIP
EGSTVLALGD SLTFGYGANP 51 GESYPAQLQK LTGWNIVNGG VSGDTSAQAL
SRLPALLARK PKLVIVGIGG 101 NDFLRKVPKE QTRANIAKII ETVQKENIPA
VLVGVPHITL GALFGHLSDH 151 PLYEDLSEEY GIPLFGGAWA EILGDNNLKS
DQIHANGKGY RKFAEDLNQF 201 LRKQGFR
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 996
shows 98.1% identity over a 207 aa overlap with a predicted ORF
(ORF 996) from N. gonorrhoeae
TABLE-US-03535 m996/g996 98.1% identity in 207 aa overlap 10 20 30
40 50 60 m996.pep
MNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLALGDSLTFGYGANPGESYPAQLQK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| g996
MNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLALGDSLTFGYGANPGESYPAQLQK 10 20
30 40 50 60 70 80 90 100 110 120 m996.pep
LTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIVGIGGNDFLRKVPKEQTRANIAKII
||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||| g996
LTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIVGIGGNDFLRKVPEEQTRANIAKII 70 80
90 100 110 120 130 140 150 160 170 180 m996.pep
ETVQKENIPAVLVGVPHITLGALFGHLSDHPLYEDLSEEYGIPLFGGAWAEILGDNNLKS
||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||| g996
ETVQKENIPAVLVGVPHITLGALFGHLSDHPLYEDLSEEYGIPLFGGAWAEILGNNNLKS 130
140 150 160 170 180 190 200 m996.pep DQIHANGKGYRKFAEDLNQFLRKQGFR
|||||||||||||||:|||||||:||| g996 DQIHANGKGYRKFAENLNQFLRKHGFRX 190
200
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3011>:
TABLE-US-03536 a996.seq 1 ATGAACAGAA GAACCTTCCT CCTCGGCGCA
GGCGCGTTGC TCCTTACCGC 51 CTGCGGCAGA AAATCCGCCC GAACCCACGC
CAAAATTCCC GAAGGAAGCA 101 CCGTACTTGC CTTGGGCGAT TCGCTTACCT
TCGGCTACGG CGCAAACCCC 151 GGCGAATCCT ACCCCGCGCA ACTGCAAAAA
CTGACGGGTT GGAATATTGT 201 CAACGGCGGC GTATCGGGCG ATACATCCGC
CCAAGCCCTG TCGCGCCTGC 251 CCGCGCTGTT GGCACGCAAA CCCAAGCTTG
TGATTGTCGG CATAGGCGGC 301 AACGACTTTC TGCGCAAAGT TCCCAAGGAG
CAGACCCGCG CCAATATCGC 351 GAAAATCATC GAAACCGTGC AGAAGGAAAA
CATCCCCGCC GTCCTCGTCG 401 GCGTGCCGCA CATTACCTTG GGCGCGTTGT
TCGGGCATTT GAGCGATCAT 451 CCGCTGTATG AGGATTTGTC CGAGGAATAC
GGCATTCCGC TGTTCGGCGG 501 CGCGTGGGCG GAAATTTTGG GCGATAATAA
TCTGAAATCC GACCAAATCC 551 ACGCCAACGG CAAAGGCTAT CGGAAATTTG
CCGAAGATTT GAATCAATTT 601 TTGAGAAAAC AGGGGTTTAG ATAA
This corresponds to the amino acid sequence <SEQ ID 3012; ORF
996.a>:
TABLE-US-03537 a996.pep 1 MNRRTFLLGA GALLLTACGR KSARTHAKIP
EGSTVLALGD SLTFGYGANP 51 GESYPAQLQK LTGWNIVNGG VSGDTSAQAL
SRLPALLARK PKLVIVGIGG 101 NDFLRKVPKE QTRANIAKII ETVQKENIPA
VLVGVPHITL GALFGHLSDH 151 PLYEDLSEEY GIPLFGGAWA EILGDNNLKS
DQIHANGKGY RKFAEDLNQF 201 LRKQGFR*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 996
shows 100.0% identity over a 207 aa overlap with a predicted ORF
(ORF 996) from N. meningitidis
TABLE-US-03538 a996/m996 100.0% identity in 207 aa overlap 10 20 30
40 50 60 a996.pep
MNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLALGDSLTFGYGANPGESYPAQLQK
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m996
MNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLALGDSLTFGYGANPGESYPAQLQK 10 20
30 40 50 60 70 80 90 100 110 120 a996.pep
LTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIVGIGGNDFLRKVPKEQTRANIAKII
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m996
LTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIVGIGGNDFLRKVPKEQTRANIAKII 70 80
90 100 110 120 130 140 150 160 170 180 a996.pep
ETVQKENIPAVLVGVPHITLGALFGHLSDHPLYEDLSEEYGIPLFGGAWAEILGDNNLKS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m996
ETVQKENIPAVLVGVPHITLGALFGHLSDHPLYEDLSEEYGIPLFGGAWAEILGDNNLKS 130
140 150 160 170 180 190 200 a996.pep DQIHANGKGYRKFAEDLNQFLRKQGFRX
||||||||||||||||||||||||||| m996 DQIHANGKGYRKFAEDLNQFLRKQGFR 190
200
The following partial DNA sequence was identified in N. gonorrhoeae
<SEQ ID 3013>:
TABLE-US-03539 g997.seq (partial) 1 ATGATGAACA CGCCGCATCC
GCGCCCGAAA ATCGCCGTCA TCGGCGCAGG 51 CTGGGCCGGC TTGTCCGCCG
CCGTCACCTT GGCGCGGCAC GCCGACGTTA 101 CCCTGTTTGA AGCCGGCCGG
CAGGCGGGCG GAAGGGCGCG CACACTGGCC 151 GGAAATACCG ACGGTTTCGG
TTTTTTGGAC AACGGGCAGC ACATTTTGCT 201 CGGCGCATAC CGGGGCGTGT
TGCGCCTGAT GAAAACCATC GGTTCAGACC 251 CCCGTGCCGC CTTTTTGCGC
GTACCGCTGC ACTGGCATAT GCACGGCGGT 301 TTGCAGTTCC GCGCCCTCCC
CCTGCCCGCG CCGCTGCATA TTTTGGGCGG 351 CGTGCTGCTT GCCCGGCGCG
TACCGTCCGC ATTCAAAGCC AAACTGCTTG 401 CCGATATGTC CGATTTGCAG
AAGTCCGCAC GCCTCGGACA GCCCGACACG 451 ACAGTTGCAC AATGGCTGAA
ACAGCGGAAC GTGCCGCGTG CCGCCGTAAT 501 GCAGTTTTGG CAGCCCTTGG
TCTGGGGCGC GCTCAACACG CCTTTGGAAA 551 CCGCAAGCCT GCGCGTGTTG
TGCAACGTTT TGTCCGACGG CGTGCTGACG 601 AAAAAATCCG GCAGCGACTA
TCTCCTACCC AAACAGGATT TGGGCGCAAT 651 CGTCGCCGAA CCCGCCTTGG
CGGAGCTTCA ACGGCTCGGC GCGGACATCC 701 GCCTCGAAAC GCGCGTATGC
CGTCTGAACA CCCTCCCGGA CGGAAAAGTC 751 CTCGTCAACG GCGAAGCCTT
CGATGCCGCC ATACTTGCCA CCGCGCCCTA 801 CCACGCCGCC GCGCTCCTGC
CCGAAGGCAC GCCCGAACAC GTTCAGACGG 851 CATATCAAAA CCTTCGCTAC
CACGCCATCA CCACCGTCTA TCTGCGCTAC 901 GCCGAACCCG TCCGcCTGCc
CGCCCCGCTG ACcGGCATtg CCGAcggcAC 951 ggcaCaatgG CTGCTTTgcc
cgGGGCAGGC tccggactgc CcccaaAacg 1001 aagTCTCCGC cGTCAttagc
GTTTCCGAcc GCGtcggcgC Gtttgcaaac 1051 cga...
This corresponds to the amino acid sequence <SEQ ID 3014 ORF
997.ng>:
TABLE-US-03540 g997.pep (partial) 1 MMNTPHPRPK IAVIGAGWAG
LSAAVTLARH ADVTLFEAGR QAGGRARTLA 51 GNTDGFGFLD NGQHILLGAY
RGVLRLMKTI GSDPRAAFLR VPLHWHMHGG 101 LQFRALPLPA PLHILGGVLL
ARRVPSAFKA KLLADMSDLQ KSARLGQPDT 151 TVAQWLKQRN VPRAAVMQFW
QPLVWGALNT PLETASLRVL CNVLSDGVLT 201 KKSGSDYLLP KQDLGAIVAE
PALAELQRLG ADIRLETRVC RLNTLPDGKV 251 LVNGEAFDAA ILATAPYHAA
ALLPEGTPEH VQTAYQNLRY HAITTVYLRY 301 AEPVRLPAPL TGIADGTAQW
LLCPGQAPDC PQNEVSAVIS VSDRVGAFAN 351 R....
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3015>:
TABLE-US-03541 m997.seq 1 ATGATGAACA CGCCGCATCC GCGCCCGAAA
ATCGCCGTCA TCGGCGCAGG 51 CTGGGCAGGA CTGTCCGCCG CCGTCACCTT
GGCGCGGCAC GCCGACGTTA 101 CCCTGTTTGA AGCCGGCCGG CAGGCGGGCG
GCAGGGCGCG CACACTGGCC 151 GGAAATACCG ACGGTTTCGG TTTTTTGGAC
AACGGGCAGC ACATTTTGCT 201 CGGCGCATAC CGGGGCGTGT TGCGCCTGAT
GAAAACCATC GGTTCGGATC 251 CCCGTGCCGC CTTTTTGCGC GTACCGCTGC
ACTGGCATAT GCACGGCGGT 301 TTGCAGTTCC GCGCCCTCCC CCTGCCCGCG
CCGCTGCATA TTTTGGGCGG 351 CGTGCTGCTT GCCCGGCGTG CACCGACTGC
ATTCAAAGCC AAACTGCTTG 401 CCGATATGTC CGATTTGCAG AAGTCCGCAC
GCCTCGGACA GCCCGACACG 451 ACAGTGGCGC AATGGCTGAA ACAGCGGAAC
GTGCCGCGTG CCGCCGTGAT 501 GCAGTTTTGG CAGCCCTTGG TTTGGGGCGC
GCTCAACACG CCTTTGGAAA 551 CCGCAAGCCT GCGCGTGTTG TGCAACGTTT
TGTCCGACGG CGTGCTGACG 601 AAAAAATCCG GCAGCGACTA TCTCCTACCC
AAGCAGGATT TGGGCGCAAT 651 CGTCGCCGAA CCCGCCTTGG CGGATCTTCA
ACGGCTCGGC GCGGACATCC 701 GCCTCGAAAC GCGCGTATGC CGTCTGAACA
CCCTCCCGGA CGGGAAAGTG 751 CTCGTCAACG GCGAAGCTTT CGATGCCGCC
GTCCCCGCCA CCGCGCCCTA 801 CCACGCCGCC GCGCTCCTGC CCGAAGGCAC
GCCCGAACAC GTTCAGACGG 851 CATATCAAAA CCTTCGCTAC CACGCCATCA
CCACCGTCTA TCTGCGCTAC 901 GCCGAACCCG TCCGCCTGCC CGCCCCGCTG
ACCGGCCTTG CCGACGGCAC 951 GGTGCAATGG CTGCTTTGCC GGGGCAGGCT
CGGACTGCCT GAAAACGAAG 1001 TGTCCGCCGT CATCAGCGTT TCCGACCGCG
TCGGCGCGTT TGCAAACCGG 1051 GCGTGGGCGG ACAAAGCCCA CGCCGACCTC
AAACGCATCC TTCCGCATTT 1101 GGGCGAACCC GAAGCCGTGC GCGTCATCAC
CGAAAAACGC GCCACAACCG 1151 CAGCCGATGC CCCGCCGCCG GACTTGTCGT
GGTTGCACCG GCACCGCATC 1201 TTCCCCGCCG GCGACTACCT CCACCCGGAC
TACCCCGCCA CGCTCGAAGC 1251 CGCCGTACAA TCAGGTTTCG CGTCGGCGGA
AGCCTGCCTG CAAAGCCTGA 1301 GCGATGCCGT CTGA
This corresponds to the amino acid sequence <SEQ ID 3016; ORF
997>:
TABLE-US-03542 m997.pep 1 MMNTPHPRPK IAVIGAGWAG LSAAVTLARH
ADVTLFEAGR QAGGRARTLA 51 GNTDGFGFLD NGQHILLGAY RGVLRLMKTI
GSDPRAAFLR VPLHWHMHGG 101 LQFRALPLPA PLHILGGVLL ARRAPTAFKA
KLLADMSDLQ KSARLGQPDT 151 TVAQWLKQRN VPRAAVMQFW QPLVWGALNT
PLETASLRVL CNVLSDGVLT 201 KKSGSDYLLP KQDLGAIVAE PALADLQRLG
ADIRLETRVC RLNTLPDGKV 251 LVNGEAFDAA VPATAPYHAA ALLPEGTPEH
VQTAYQNLRY HAITTVYLRY 301 AEPVRLPAPL TGLADGTVQW LLCRGRLGLP
ENEVSAVISV SDRVGAFANR 351 AWADKAHADL KRILPHLGEP EAVRVITEKR
ATTAADAPPP DLSWLHRHRI 401 FPAGDYLHPD YPATLEAAVQ SGFASAEACL
QSLSDAV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. gonorrhoeae ORF 997
shows 96.0% identity over a 351 aa overlap with a predicted ORF
(ORF 997) from N. gonorrhoeae
TABLE-US-03543 g997/m997 96.0% identity in 351 aa overlap 10 20 30
40 50 60 g997.pep
MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGGRARTLAGNTDGFGFLD
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m997
MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGGRARTLAGNTDGFGFLD 10 20
30 40 50 60 70 80 90 100 110 120 g997.pep
NGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQFRALPLPAPLHILGGVLL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m997
NGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQFRALPLPAPLHILGGVLL 70 80
90 100 110 120 130 140 150 160 170 180 g997.pep
ARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRNVPRAAVMQFWQPLVWGALNT
|||:|:|||||||||||||||||||||||||||||||||||||||||||||||||||||| m997
ARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRNVPRAAVMQFWQPLVWGALNT 130
140 150 160 170 180 190 200 210 220 230 240 g997.pep
PLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIVAEPALAELQRLGADIRLETRVC
||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||| m997
PLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIVAEPALADLQRLGADIRLETRVC 190
200 210 220 230 240 250 260 270 280 290 300 g997.pep
RLNTLPDGKVLVNGEAFDAAILATAPYHAAALLPEGTPEHVQTAYQNLRYHAITTVYLRY
||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||| m997
RLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEGTPEHVQTAYQNLRYHAITTVYLRY 250
260 270 280 290 300 310 320 330 340 350 g997.pep
AEPVRLPAPLTGIADGTAQWLLCPGQAPDCPQNEVSAVISVSDRVGAFANR
||||||||||||:||||:||||| |: |:||||||||||||||||||| m997
AEPVRLPAPLTGLADGTVQWLLCRGRL-GLPENEVSAVISVSDRVGAFANRAWADKAHAD 310
320 330 340 350
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3017>:
TABLE-US-03544 a997.seq 1 ATGATGAACA CGCCGCATCC GCGCCCGAAA
ATCGCCGTCA TCGGCGCAGG 51 CTGGGCCGGC TTGTCCGCCG CCGTTACCTT
GGCGCGGCAC GCCGACGTTA 101 CCCTGTTTGA AGCCGGCCGG CAGGCGGGCG
GCAGGGCGCG CGCACTGGCC 151 GGAAATACCG ACGGTTTCGG TTTTTTGGAC
AACGGGCAGC ATATTTTACT 201 CGGCGCATAC CGGGGCGTGT TGCGCCTGAT
GAAAACCATC GGTTCAGACC 251 CCCATGCCGC CTTTTTGCGC GTACCGCTGC
ACTGGCATAT GCACGGCGGT 301 TTGCAGTTCC GCGCCCTCCC CCTGCCCGCG
CCCCTGCATA TTTTGGGCGG 351 CGTGCTGCTT GCCCGGCGCG TACCGTCCGC
ATTCAAAGCC AAACTGCTTG 401 CCGATATGTC CGATTTGCAG AAGTCCGCAC
GCCTCGGACA GCCCGACACG 451 ACAGTGGCGC AATGGCTGAA ACAGCGGAAC
GTGCCGCGTG CCGCCGTAAT 501 GCAGTTTTGG CAGCCCTTGG TTTGGGGCGC
GCTCAACACG CCTTTGGAAA 551 CCGCAAGCCT GCGCGTGTTG TGCAACGTTT
TGTCCGACGG CGTGCTGACG 601 AAAAAATCCG GCAGCGACTA TCTCCTACCC
AAACAGGATT TGGGCGCAAT 651 CGTCGCCGAA CCCGCCTTGG CGGAGCTTCA
ACGGCTCGGC GCGGACATCC 701 GCCTCGAAAC GCGCATATGC CGTCTGAACA
CCCTCCCGGA CGGGAAAGTG 751 CTCGTCAACG GCGAACCTTT CGATGCCGCC
GTCCCCGCCA CCGCGCCCTA 801 CCACGCCGCC GCGCTCCTGC CCGAAGGCAC
GCCCGAACAC GTTCAGACGG 851 CATATCAAAA CCTTCGCTAT CACGCCATCA
CCACCGTCTA TCTGCGCTAT 901 GCCGAACCCG TCCGCTTGCC TGCCCCGCTG
ACCGGACTTG CCGACGGCAC 951 GGTGCAATGG CTGCTTTGCC GGGGCAGGCT
CGGACTGCCT GAAAACGAAG 1001 TGTCCGCCGT CATCAGCGTT TCCGACCGCG
TCGGCGCGTT TGCAAACCGG 1051 GCGTGGGCGG ACAAAGTTCA CGCCGACCTC
AAACGCATCC TTCCGCATTT 1101 GGGCGAACCC GAAGCCGTGC GCGTCATCAC
CGAAAAACGC GCCACAACCG 1151 CAGCCGATGC CCCGCCGCCG GATTTGTCGT
GGTTGCACCG GCACCGCATC 1201 TTCCCCGCCG GCGACTACCT CCACCCAGAC
TACCCCGCCA CGCTCGAAGC 1251 CGCCGTACAA TCAGGTTTCG CGTCGGCGGA
AGCCTGCCTG CAAAGCCTGA 1301 GCGATGCCGT CTGA
This corresponds to the amino acid sequence <SEQ ID 3018; ORF
997.a>:
TABLE-US-03545 a997.pep 1 MMNTPHPRPK IAVIGAGWAG LSAAVTLARH
ADVTLFEAGR QAGGRARALA 51 GNTDGFGFLD NGQHILLGAY RGVLRLMKTI
GSDPHAAFLR VPLHWHMHGG 101 LQFRALPLPA PLHILGGVLL ARRVPSAFKA
KLLADMSDLQ KSARLGQPDT 151 TVAQWLKQRN VPRAAVMQFW QPLVWGALNT
PLETASLRVL CNVLSDGVLT 201 KKSGSDYLLP KQDLGAIVAE PALAELQRLG
ADIRLETRIC RLNTLPDGKV 251 LVNGEPFDAA VPATAPYHAA ALLPEGTPEH
VQTAYQNLRY HAITTVYLRY 301 AEPVRLPAPL TGLADGTVQW LLCRGRLGLP
ENEVSAVISV SDRVGAFANR 351 AWADKVHADL KRILPHLGEP EAVRVITEKR
ATTAADAPPP DLSWLHRHRI 401 FPAGDYLHPD YPATLEAAVQ SGFASAEACL
QSLSDAV*
Computer analysis of this amino acid sequence gave the following
results: Homology with a Predicted ORF from N. meningitidis ORF 997
shows 98.2% identity over a 437 aa overlap with a predicted ORF
(ORF 997) from N. meningitidis
TABLE-US-03546 a997/m997 98.2% identity in 437 aa overlap 10 20 30
40 50 60 a997.pep
MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGGRARALAGNTDGFGFLD
|||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||| m997
MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGGRARTLAGNTDGFGFLD 10 20
30 40 50 60 70 80 90 100 110 120 a997.pep
NGQHILLGAYRGVLRLMKTIGSDPHAAFLRVPLHWHMHGGLQFRALPLPAPLHILGGVLL
||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||| m997
NGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQFRALPLPAPLHILGGVLL 70 80
90 100 110 120 130 140 150 160 170 180 a997.pep
ARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRNVPRAAVMQFWQPLVWGALNT
|||:|:|||||||||||||||||||||||||||||||||||||||||||||||||||||| m997
ARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRNVPRAAVMQFWQPLVWGALNT 130
140 150 160 170 180 190 200 210 220 230 240 a997.pep
PLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIVAEPALAELQRLGADIRLETRIC
||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||:| m997
PLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIVAEPALADLQRLGADIRLETRVC 190
200 210 220 230 240 250 260 270 280 290 300 a997.pep
RLNTLPDGKVLVNGEPFDAAVPATAPYHAAALLPEGTPEHVQTAYQNLRYHAITTVYLRY
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| m997
RLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEGTPEHVQTAYQNLRYHAITTVYLRY 250
260 270 280 290 300 310 320 330 340 350 360 a997.pep
AEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEVSAVISVSDRVGAFANRAWADKVHADL
|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||| m997
AEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEVSAVISVSDRVGAFANRAWADKAHADL 310
320 330 340 350 360 370 380 390 400 410 420 a997.pep
KRILPHLGEPEAVRVITEKRATTAADAPPPDLSWLHRHRIFPAGDYLHPDYPATLEAAVQ
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| m997
KRILPHLGEPEAVRVITEKRATTAADAPPPDLSWLHRHRIFPAGDYLHPDYPATLEAAVQ 370
380 390 400 410 420 430 a997.pep SGFASAEACLQSLSDAVX
|||||||||||||||||| m997 SGFASAEACLQSLSDAVX 430
[0459] g999.seq Not found yet
[0460] g999.pep Not found yet
The following partial DNA sequence was identified in N.
meningitidis <SEQ ID 3019>:
TABLE-US-03547 m999.seq 1 ATGAATATGA AAAAATTGAT TTCCGCAATT
TGTGTTTCAA TTGTTTTATC 51 AGCCTGCAAC CAACAATCAA AAACGGCACA
AGCCGAAGAA CCTGTCCAAA 101 GTATCCAGGC TGCTGATTGT ACCGCCCCAA
TGGACATCAC AGTTGAACAA 151 TATCTCATCA ATTTGGAGCA AGCATTTAAA
ACTCAGAACG TCTCAACAAA 201 AATCCATAAT AAAAATATTG TCAAGACCGA
TTGTGGTTAT GACCTTACTT 251 TGGTAATGGA TTTTGGGGCG ATTGCGCTCA
AACTGGACGA GCAGCAAAAA 301 ATTAGAGCTA TCTCAGTAGG CTACATTTTA
AAAACCGACG GAGAGAAAGG 351 ACAAAATCTA GTCAATAATG CCATAAATGG
ATTACACAGT ATTCAGGCAG 401 TTCTGTCTTT AACTACCACA GACAAATTGG
GCGAATCGGA AGCAGGAAAA 451 CAACTTTTTA CAGCTTTAAC CGAAGTCGTC
AAAGAATCCA ATCAGACAGG 501 AGCAACAGCG CAAAAAGACG TTCCGGCAGA
TGGTATTTTA TATAGCGTTG 551 TTTTTGAAAA AGAAACAAAC ACCATTGCAA
TAATCGGCAG AAAACAACCC 601 TAA
This corresponds to the amino acid sequence <SEQ ID 3020; ORF
999>:
TABLE-US-03548 m999.pep 1 MNMKKLISAI CVSIVLSACN QQSKTAQAEE
PVQSIQAADC TAPMDITVEQ 51 YLINLEQAFK TQNVSTKIHN KNIVKTDCGY
DLTLVMDFGA IALKLDEQQK 101 IRAISVGYIL KTDGEKGQNL VNNAINGLHS
IQAVLSLTTT DKLGESEAGK 151 QLFTALTEVV KESNQTGATA QKDVPADGIL
YSVVFEKETN TIAIIGRKQP *
[0461] a999.seq Not found yet
[0462] a999.pep Not found yet
[0463] The foregoing examples are intended to illustrate but not to
limit the invention.
Sequence CWU 0 SQTB SEQUENCE LISTING The patent application
contains a lengthy "Sequence Listing" section. A copy of the
"Sequence Listing" is available in electronic form from the USPTO
web site
(http://seqdata.uspto.gov/?pageRequest=docDetail&DocID=US20160030545A1).
An electronic copy of the "Sequence Listing" will also be available
from the USPTO upon request and payment of the fee set forth in 37
CFR 1.19(b)(3).
0 SQTB SEQUENCE LISTING The patent application contains a lengthy
"Sequence Listing" section. A copy of the "Sequence Listing" is
available in electronic form from the USPTO web site
(http://seqdata.uspto.gov/?pageRequest=docDetail&DocID=US20160030545A1).
An electronic copy of the "Sequence Listing" will also be available
from the USPTO upon request and payment of the fee set forth in 37
CFR 1.19(b)(3).
* * * * *
References