U.S. patent application number 14/333854 was filed with the patent office on 2015-07-16 for novel ligand.
This patent application is currently assigned to Glaxo Group Limited. The applicant listed for this patent is Stuart Neville FARROW, Allard Kaptein, Jeremy David Alistair Kitson, Alison J. Winder. Invention is credited to Stuart Neville FARROW, Allard Kaptein, Jeremy David Alistair Kitson, Alison J. Winder.
Application Number | 20150197565 14/333854 |
Document ID | / |
Family ID | 10845021 |
Filed Date | 2015-07-16 |
United States Patent
Application |
20150197565 |
Kind Code |
A1 |
FARROW; Stuart Neville ; et
al. |
July 16, 2015 |
NOVEL LIGAND
Abstract
The invention provides an isolated protein which is a member of
the TNF ligand superfamily and comprises: i) a polypeptide having
the amino acid sequence of FIG. 1; or ii) a variant of the
polypeptide of i).
Inventors: |
FARROW; Stuart Neville;
(Stevenage, GB) ; Kaptein; Allard; (Stevenage,
GB) ; Kitson; Jeremy David Alistair; (Stevenage,
GB) ; Winder; Alison J.; (Stevenage, GB) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
FARROW; Stuart Neville
Kaptein; Allard
Kitson; Jeremy David Alistair
Winder; Alison J. |
Stevenage
Stevenage
Stevenage
Stevenage |
|
GB
GB
GB
GB |
|
|
Assignee: |
Glaxo Group Limited
Brentford
GB
|
Family ID: |
10845021 |
Appl. No.: |
14/333854 |
Filed: |
July 17, 2014 |
Related U.S. Patent Documents
|
|
|
|
|
|
Application
Number |
Filing Date |
Patent Number |
|
|
13536028 |
Jun 28, 2012 |
8784814 |
|
|
14333854 |
|
|
|
|
11745684 |
May 8, 2007 |
8216576 |
|
|
13536028 |
|
|
|
|
09868533 |
Sep 21, 2001 |
7399593 |
|
|
PCT/EP1999/007303 |
Oct 5, 1999 |
|
|
|
11745684 |
|
|
|
|
Current U.S.
Class: |
424/139.1 ;
435/375 |
Current CPC
Class: |
C07K 14/52 20130101;
C07K 16/28 20130101; A61K 38/00 20130101; C07K 14/70575 20130101;
C07K 2317/76 20130101; C07K 2317/21 20130101; C07K 16/241
20130101 |
International
Class: |
C07K 16/24 20060101
C07K016/24 |
Foreign Application Data
Date |
Code |
Application Number |
Dec 23, 1998 |
GB |
9828628.9 |
Claims
1.-20. (canceled)
21. A method of inhibiting the interaction in a mammal between a
receptor on B-cells and a homotrimeric polypeptide comprising a
first polypeptide having 99% sequence identity to SEQ ID NO: 2,
said method comprising administering to said mammal an antibody or
a fragment thereof that specifically binds a second polypeptide
consisting of SEQ ID NO:2 in trimeric form.
22. The method of claim 21, wherein the antibody or fragment
thereof binds to the extracellular domain of said second
polypeptide.
23. The method of claim 21, wherein said mammal is a human.
24. The method of claim 21, wherein said antibody is a monoclonal
antibody.
25. A method of inhibiting the binding of a receptor on B-cells
with a homotrimeric polypeptide comprising a first polypeptide
having 99% sequence identity to SEQ ID NO: 2, said method
comprising contacting said homotrimeric polypeptide with an
antibody or fragment thereof that specifically binds a second
polypeptide consisting of SEQ ID NO:2 in trimeric form.
26. The method of claim 25, wherein the antibody or fragment
thereof binds to the extracellular domain of said second
polypeptide.
27. The method of claim 25, wherein said antibody is a monoclonal
antibody.
28. A method of inhibiting the interaction in a mammal between a
receptor on B-cells and a homotrimeric polypeptide consisting of
SEQ ID NO: 2 in trimeric form, said method comprising administering
to said mammal an antibody or a fragment thereof that specifically
binds said polypeptide.
29. The method of claim 28, wherein the antibody or fragment
thereof binds to the extracellular domain of said polypeptide.
30. The method of claim 28, wherein said mammal is a human.
31. The method of claim 28, wherein said antibody is a monoclonal
antibody.
32. A method of inhibiting the binding of a receptor on B-cells
with a homotrimeric polypeptide consisting of SEQ ID NO: 2 in
trimeric form, said method comprising contacting said homotrimeric
polypeptide with an antibody or fragment thereof that specifically
binds said polypeptide.
33. The method of claim 32, wherein the antibody or fragment
thereof binds to the extracellular domain of said polypeptide.
34. The method of claim 32, wherein said antibody is a monoclonal
antibody.
Description
CROSS-REFERENCE TO RELATED APPLICATIONS
[0001] This application is a continuation of U.S. patent Ser. No.
13/536,028, filed Jun. 12, 2012, which is a continuation of U.S.
patent application Ser. No. 11/745,684, filed May 8, 2007, which is
a continuation of U.S. patent application Ser. No. 09/868,533,
filed Sep. 21, 2001, which is a 371 of International Application
No. PCT/EP99/07303, filed Oct. 5, 1999, which claims priority to
Great Britain Application No. 9828628.9, filed Dec. 23, 1998.
[0002] The present invention relates to a novel protein of the TNF
ligand superfamily, nucleotides coding for it, vectors and host
cells containing the same and methods of screening for modulators
of the interaction between said protein and its receptor, said
modulators for use in therapy for various disorders including, but
not restricted to, cancer, inflammation, infection and autoimmune
disease. Also, direct use of said ligand in therapy, for example
against viral diseases or as a potential vaccine adjuvant.
[0003] Fifteen other members of the TNF ligand family have
currently been cloned and published and most have been shown to
bind to cell-surface receptors of the TNF receptor family. The
interaction between a TNF ligand and its receptor is the key signal
to start a chain of events leading to a range of responses as
diverse as T-cell proliferation, apoptosis and induction of
cytokine production. Some activities such as induction of T-cell
proliferation are common to many members of the family, whilst some
are shared by only a few, and others are unique. The interaction
between these ligands and their receptors provides an attractive
target for the development of novel therapies.
[0004] The present invention provides an isolated protein
comprising i) a polypeptide having the amino acid sequence of FIG.
1 or ii) a variant of the polypeptide of i). The invention also
provides an isolated protein comprising a polypeptide having the
amino acid sequence as provided in FIG. 2 or variants thereof. The
protein having the amino acid sequence provided in FIG. 2 is
obtainable from humans and is a type II membrane protein with a
single transmembrane domain near the N-terminus, which contains two
potential N-linked glycosylation sites, and a protease cleavage
site between amino acids arginine 133 and alanine 134. The
polypeptide having the amino acid sequence provided in FIG. 1 is
soluble, and forms part of the extracellular region of the
polypeptide having the amino acid sequence provided in FIG. 2.
Preferably the protein of the invention comprises a polypeptide
which is 65%, preferably 75%, more preferably 80% and even more
preferably 90% homologous to the amino acid sequence of FIG. 1. The
protein of the invention most preferably comprises a polypeptide
which is, at least 95%, for example 97%, 98% or 99% homologous to
the amino acid sequence of FIG. 1. Preferably the protein of the
invention is obtainable from mammals, more preferably from mice or
humans, and most preferably from humans.
[0005] The present invention further provides a protein comprising
a polypeptide which has the sequence as provided in FIG. 2 from
amino acid 134 onwards, or the sequence as provided in FIG. 6 from
amino acid 127 onwards.
[0006] The present invention further provides a protein comprising
a polypeptide which has the sequence as provided in FIG. 2 from
amino acid 122 onwards.
[0007] The present invention further provides a protein comprising
a polypeptide which has the sequence as provided in FIG. 6 from
amino acid 115 onwards.
[0008] The present invention further provides an isolated protein
comprising a polypeptide having the amino acid sequence as provided
in FIG. 5, or variants thereof. Moreover, the invention provides an
isolated protein comprising a polypeptide having the amino acid
sequence as provided in FIG. 6 or variants thereof. The protein
having the amino acid sequence as provided in FIG. 6 is isolatable
from mice and is a type II membrane protein with a single
transmembrane domain near the N-terminus, which protein contains
one potential N-linked glycosylation site, and a protease cleavage
site between amino acids arginine126 and alanine127. The
polypeptide having the amino acid sequence provided in FIG. 5 is
soluble, and forms part of the extracellular region of the
polypeptide having the amino acid sequence provided in FIG. 6.
[0009] Proteins of the invention isolatable from humans, and
proteins of the invention isolatable from mice are highly
homologous, displaying 67% amino acid identity over their entire
sequence. In the C-terminal region involved in receptor binding,
amino acid identity is much higher (87%). A significant difference
between proteins of the invention isolatable from humans or mice is
the presence of an additional exon in the mouse sequence encoding
an extra 31 amino acids which reduces the overall homology between
the two proteins.
[0010] The term variant refers to proteins which have substantially
the same biological functionality as the protein for which sequence
information has been provided. The term variant encompasses
fragments, derivatives and analogues of the protein of the
invention.
[0011] Fragments include portions of the protein which retain
sufficient identity to the original protein to be effective for
example in a screen.
[0012] Derivatives include alternate forms of the protein sequence
which may have deletions, additions or substitutions of one or more
amino acids. It will be understood by a person skilled in the art
that certain substitutions, deletions or additions of amino acids
can be made, or indeed can occur naturally, without substantially
altering the function of the protein.
[0013] Analogues include but are not limited to precursor proteins
which can be activated by cleavage of the precursor protein to
produce an active mature protein, or a fusion with a leader or
secretory sequence to aid purification.
[0014] The protein of the present invention may be a recombinant
protein, a natural protein or a synthetic protein.
[0015] The proteins of the invention may be present in all
embodiments in trimeric form and such trimers form an embodiment of
the invention. Typically the proteins of the invention will bind to
their receptor as a trimer, thus allowing two or more receptor
molecules to be brought into proximity. A trimer may be a
heterotrimer wherein more than one type of subunit is present, or a
homotrimer wherein all subunits are the same.
[0016] The present invention also provides antibodies specific for
the protein of the invention. The term antibody as used herein
includes all immunoglobulins and fragments thereof which contain
recognition sites for antigenic determinants of proteins of the
present invention. The antibodies of the present invention may be
polyclonal or monoclonal, may be intact antibody molecules or
fragments containing the active binding region of the antibody,
e.g. Fab or F(ab).sub.2. The present invention also includes
chimeric, single chain and humanised antibodies and fusions with
non-immunoglobulin molecules. Various procedures known in the art
may be used for the production of such antibodies and
fragments.
[0017] The proteins of the invention, their variants or cells
expressing them can be used as an immunogen to produce antibodies
thereto. Antibodies generated against the proteins of the invention
can be obtained by direct injection of the polypeptide into an
animal, preferably a non-human. The antibody so obtained will then
bind the protein itself. In this manner, even a fragment of the
protein of the invention can be used to generate antibodies binding
the whole native protein.
[0018] The antibodies of the present invention may be used to
locate the protein of the invention in tissue expressing that
protein. They are also, for example, useful for purification of a
protein of the invention, and accordingly there is provided a
method of purifying a protein of the invention which method
comprises the use of an antibody of the present invention. The
antibodies of the present invention may also be used as therapeutic
agents in their own right.
[0019] A further aspect of the invention provides an isolated
polynucleotide which encodes a protein of the invention. Also
included within the invention are anti-sense nucleotides or
complementary strands. Preferably the nucleotide encodes a protein
of the invention isolatable from a mouse or a human. More
preferably the isolated polynucleotide comprises the polynucleotide
portion having the nucleotide sequence shown in FIG. 3 (SEQ ID NO:
3), which codes for the polypeptide shown in FIG. 3 (SEQ ID NO: 9),
a variant of said portion, or a complementary strand. The present
invention further provides an isolated polynucleotide comprising
the nucleotide sequence shown in FIG. 4 (SEQ ID NO: 4), which codes
for the polypeptide of FIG. 4 (SEQ ID NO:10).
[0020] The nucleotide sequence may be isolated from a cell
(preferably a human cell), by screening with a probe derived from
the protein of the invention, or by other methodologies known in
the art such as polymerase chain reaction (PCR) for example on
genomic DNA with appropriate oligonucleotide primers derived from
or designed based on the protein of the invention. A bacterial
artificial chromosome library can be generated using mouse or human
DNA for the purposes of screening.
[0021] The nucleotide sequences of the present invention may be in
the form of RNA or in the form of DNA, for example cDNA, genomic
DNA, and synthetic DNA. Preferably the nucleotide sequence of the
invention is cDNA. The DNA may be double-stranded or
single-stranded, and if single stranded may be the coding strand or
non-coding (anti-sense) strand. The coding sequence which encodes
the protein of the invention may be identical to one of the coding
sequences set forth in the Figures, or may be a different coding
sequence which as a result of the redundancy or degeneracy of the
genetic code, encodes the same protein as the sequences set forth
therein.
[0022] A nucleotide sequence which encodes a protein of the present
invention may include: a coding sequence for the protein or any
variant thereof; a coding sequence for the protein or any variant
thereof and additional coding sequence such as a leader or
secretory sequence or a proprotein sequence; a coding sequence for
the protein or any variant thereof (and optionally additional
coding sequence) and non-coding sequences, such as introns or
non-coding sequences 5' and/or 3' of the coding sequence for the
full length protein.
[0023] The invention also provides nucleotide variants, analogues,
derivatives and fragments which encode a protein of the invention.
Nucleotides are included which preferably have at least 65%
identity over their entire length to the nucleotide having the
sequence of FIG. 3. More preferred are those sequences which have
at least 75% identity over their entire length to the nucleotide
having the sequence of FIG. 3. Even more preferred are
polynucleotides which demonstrate at least 90%, for example 95%,
97%, 98% or 99% identity over their entire length to the nucleotide
having the sequence of FIG. 3.
[0024] The nucleotide sequences of the invention may also have the
coding sequence fused in frame to one or more marker sequences
which allow for purification of the protein of the present
invention such as a FLAG epitope, a myc sequence, or a secretory
signal.
[0025] The nucleotide sequences of the present invention may be
employed for producing a protein of the invention by recombinant
techniques. Thus, for example the nucleotide sequence may be
included in any one of a variety of expression vehicles or cloning
vehicles, in particular vectors or plasmids for expressing a
protein. Such vectors include chromosomal, non-chromosomal and
synthetic DNA sequences. Examples of suitable vectors include
derivatives of bacterial plasmids; phage DNA; yeast plasmids;
vectors derived from combinations of plasmids and phage DNA and
viral DNA. However, any other plasmid or vector may be used as long
as it is replicable and viable in the host.
[0026] More particularly, the present invention also provides a
vector comprising one or more of the nucleotide sequences as
described above. The vectors are, for example, an expression
vector, such as a plasmid or viral vector into which an isolated
polynucleotide of the invention has been inserted, in a forward or
reverse orientation. In a preferred aspect of this embodiment, the
vector further comprises one or more regulatory sequences to direct
mRNA synthesis, including, for example, a promoter, operably linked
to the sequence. Suitable promoters include: CMV, LTR or SV40
promoter and other promoters known to control expression of genes
in prokaryotic or eukaryotic cells or their viruses. The vector may
contain an enhancer and a ribosome binding site for translation
initiation and a transcription terminator.
[0027] Large numbers of suitable vectors and promoters/enhancers,
will be known to those of skill in the art, but any plasmid or
vector, promoter/enhancer may be used as long as it is replicable
and functional in the host.
[0028] Appropriate cloning and expression vectors for use with
prokaryotic and eukaryotic hosts include mammalian expression
vectors, insect expression vectors, yeast expression vectors,
bacterial expression vectors and viral expression vectors and are
described in Sambrook et al., Molecular Cloning: A laboratory
Manual, Second Edition, Cold Spring Harbor, N.Y., (1989) A
preferred vector is pFLAG-CMV-1 or pcDNA3.
[0029] The vector may also include appropriate sequences for
selection and/or amplification of expression. For this the vector
will comprise one or more phenotypic selectable/amplifiable
markers. Such markers are also well known to those skilled in the
art.
[0030] In a further embodiment, the present invention provides host
cells comprising a vector of the invention, and capable of
expressing a nucleotide sequence of the invention. The host cells
can be, for example, a higher eukaryotic cell, such as a mammalian
cell or a lower eukaryotic cell, such as a yeast cell or a
prokaryotic cell such as a bacterial cell. Suitable prokaryotic
hosts for transformation include E-coli. Suitable eukaryotic hosts
include HEK293T cells and HeLa cells.
[0031] Cell free translation systems can also be employed to
produce such proteins using RNAs derived from the DNA constructs of
the present invention.
[0032] Routine methods can be employed to purify the protein of the
invention from recombinant cell cultures. Such methods are well
understood by persons skilled in the art.
[0033] The proteins and nucleotide sequences of the present
invention are provided in an isolated form. The term "isolated" is
intended to convey that the material is not in its native state.
Thus, the naturally-occurring nucleotide sequence or protein
present in a living animal is in its native state and is not
isolated, but the same nucleotide sequence or protein, separated
from some or all of the materials it co-exists with in the natural
system, is isolated. Similarly, a protein which has been produced
by synthetic means, for example, by recombinant methods is
"isolated." Such nucleotide sequence could be part of a vector.
Such nucleotide sequence or protein could be part of a composition,
and still be isolated in that such vector or composition is not
part of its natural environment. The proteins and nucleotide
sequences of the present invention are also preferably provided in
purified form, and preferably are purified to at least 50% purity,
more preferably about 75% purity, most preferably 90% purity or
greater, such as 95%, 98% pure.
[0034] A further aspect of the present invention is the use of the
proteins according to the invention in screening methods. Such
methods identify compounds which act as modulators of the
interaction between proteins of the invention and their receptor.
In general terms, such screens will comprise contacting a protein
of the invention, preferably in trimeric form, and its receptor in
the presence or absence of the test compound, and measuring the
increase or decrease in the level of binding, or increase or
decrease in a response, for example NF-kB activation or CD40
activation, when the test compound is present. The proteins of the
invention may be used in high throughput screens, thus enabling
large numbers of compounds to be studied. The screening methods of
the invention are generally well known to persons skilled in the
art. The present invention also includes within its scope those
compounds which are identified by the screening methods of the
invention as possessing useful activity.
[0035] The present invention further provides compounds which are
modulators of the interaction between a protein of the invention
and its receptor for use in therapy, for example immunotherapy. The
compounds are provided for use in the treatment of, for example,
autoimmune disease, inflammation and other diseases associated with
the activation of the transcription factor NF-.kappa.B, for
example, rheumatoid arthritis, neuronal inflammation, asthma, in
the treatment of cancers, in the treatment of infections, such as
septic shock and in the treatment of atherosclerosis. The compounds
may be agonists or antagonists of the receptor to which the
proteins of the invention bind, but preferably are antagonists. The
compounds include, for example, aptamers, polypeptides and small
molecules.
[0036] The invention further provides the use of compounds which
have been identified by the screening techniques of the invention,
for the manufacture of a medicament for use in treatment or
prophylaxis of disorders that are responsive to modulation of the
interaction between the protein of the invention and its
receptor.
[0037] The present invention additionally provides a method of
treatment of a disorder which is responsive to modulation of the
interaction between the protein of the invention and its receptor
which comprises administering to a patient an effective amount of a
compound identifiable by the screening techniques of the invention,
or an effective amount of the protein of the invention.
[0038] The present invention further provides the protein of the
invention for use in therapy, for example, for use in
immunotherapy, particularly during viral infections, as a vaccine,
or as a vaccine adjuvant.
[0039] The present invention also provides the use of the protein
of the invention in the manufacture of a medicament for use in
immunotherapy, for example, during viral infections, or as a
vaccine adjuvant.
[0040] The present invention additionally provides a method of
treatment of a disorder which is responsive to an increased amount
of the protein of the invention which comprises administering to a
patient an effective amount of the protein of the invention.
[0041] The invention also provides a nucleotide sequence as defined
herein, for use in gene therapy or as a vaccine, for example, to
increase the production of the protein of the invention in
disorders which respond to an increased level of the protein of the
sequence of FIG. 1 or FIG. 2. A patient may be provided with said
nucleotide as a naked polynucleotide in the form of an expression
vector such as a plasmid, or with a viral vector comprising said
nucleotide, or a cell comprising said nucleotide or vector.
[0042] Complementary or anti-sense strands of the nucleotide
sequences of the invention can also be used in gene therapy. For
example, a cDNA sequence or fragments thereof could be used in gene
therapy strategies to down regulate expression of the protein of
the invention. Antisense technology can be used to control gene
expression through triple-helix formation of antisense DNA or RNA,
both of which methods are based on binding of a nucleotide sequence
to DNA or RNA.
[0043] Suitable techniques for introducing the naked polynucleotide
or vector into a patient include topical application with an
appropriate vehicle. The naked polynucleotide or vector may be
present together with a pharmaceutically acceptable excipient, such
as phosphate buffered saline (PBS). One technique involves particle
bombardment (which is also known as `gene gun` technology and is
described in U.S. Pat. No. 5,371,015). Here inert particles (such
as gold beads) are coated with a nucleic acid, and are accelerated
at speeds sufficient to enable them to penetrate a surface of a
recipient (e.g. skin), for example by means of discharge under high
pressure from a projecting device. (Particles coated with a nucleic
acid molecule of the present invention are within the scope of the
present invention, as are devices loaded with such particles.)
Other methods of administering the nucleic acid directly to a
recipient include ultrasound, electrical stimulation,
electroporation and microseeding which is described in U.S. Pat.
No. 5,697,901.
[0044] Nucleic acid molecules of the present invention may also be
administered by means of specialised delivery vectors useful in
gene therapy. Gene therapy approaches are discussed for example by
Verme et al, Nature 1997, 389:239-242. Both viral and non-viral
systems can be used. Viral based systems include retroviral,
lentiviral, adenoviral, adeno-associated viral, herpes viral and
vaccinia-viral based systems. Non-viral based systems include
direct administration of nucleic acids and liposome-based
systems.
[0045] A nucleic acid sequence of the present invention may be
administered by means of transformed cells. Such cells include
cells harvested from a subject. The naked polynucleotide or vector
of the present invention can be introduced into such cells in vitro
and the transformed cells can later be returned to the subject. The
polynucleotide of the invention may integrate into nucleic acid
already present in a cell by homologous recombination events. A
transformed cell may, if desired, be grown up in vitro and one or
more of the resultant cells may be used in the present invention.
Cells can be provided at an appropriate site in a patient by known
surgical or microsurgical techniques (e.g. grafting,
micro-injection, etc.)
[0046] The invention also relates to compositions comprising the
polypeptide, polynucleotide, vector or transfected cell of the
invention in addition to those which may be administered by gene
gun. Thus, the polypeptides of the present invention may be
employed in combination with a non-sterile or sterile carrier or
carriers for use with cells, tissues or organisms, such as a
pharmaceutical carrier suitable for administration to a subject.
Such compositions comprise, for instance, a media additive or a
therapeutically effective amount of a polypeptide of the invention
and a pharmaceutically acceptable carrier or excipient. Such
carriers may include, but are not limited to, saline, buffered
saline, dextrose, water, glycerol, ethanol and combinations
thereof. The formulation should suit the mode of
administration.
[0047] The invention further relates to diagnostic and
pharmaceutical packs and kits comprising one or more containers
filled with one or more of the ingredients of the aforementioned
compositions of the invention. Associated with such container(s)
can be a notice in the form prescribed by a governmental agency
regulating the manufacture, use or sale of pharmaceuticals or
biological products, reflecting approval by the agency of the
manufacture, use or sale of the product for human
administration.
[0048] Polypeptides, polynucleotides and other compounds of the
present invention such as those identifiable by screening methods
as described above may be employed alone or in conjunction with
other compounds, such as therapeutic compounds.
[0049] The pharmaceutical compositions may be administered in any
effective, convenient manner including, for instance,
administration by topical, oral, anal, vaginal, intravenous,
intraperitoneal, intramuscular, subcutaneous, intranasal or
intradermal routes among others.
[0050] The pharmaceutical compositions generally are administered
in an amount effective for treatment or prophylaxis of a specific
indication or indications. In general, the compositions are
administered in an amount of at least about 10 .mu.g/kg body
weight. In most cases they will be administered in an amount not in
excess of about 8 mg/kg body weight per day. Preferably, in most
cases, dose is from about 10 .mu.g/kg to about 1 mg/kg body weight,
daily. It will be appreciated that optimum dosage will be
determined by standard methods for each treatment modality and
indication, taking into account the indication, its severity, route
of administration, complicating conditions and the like.
[0051] In therapy or as a prophylactic, the active agent may be
administered to an individual as an injectable composition, for
example as a sterile aqueous dispersion, preferably isotonic.
[0052] Alternatively the composition may be formulated for topical
application for example in the form of ointments, creams, lotions,
eye ointments, eye drops, ear drops, mouthwash, impregnated
dressings and sutures and aerosols, and may contain appropriate
conventional additives, including, for example, preservatives,
solvents to assist drug penetration, and emollients in ointments
and creams. Such topical formulations may also contain compatible
conventional carriers, for example cream or ointment bases, and
ethanol or oleyl alcohol for lotions. Such carriers may constitute
from about 1% to about 98% by weight of the formulation; more
usually they will constitute up to about 80% by weight of the
formulation.
[0053] For administration to mammals, and particularly humans, it
is expected that the daily dosage level of the active agent will be
from 0.01 mg/kg to 10 mg/kg, typically around 1 mg/kg. The
physician in any event will determine the actual dosage which will
be most suitable for an individual and will vary with the age,
weight and response of the particular individual. The above dosages
are exemplary of the average case. There can, of course, be
individual instances where higher or lower dosage ranges are
merited, and such are within the scope of this invention.
[0054] The present invention further provides a method of producing
a protein of the invention, which method comprises introducing into
an appropriate cell line a vector comprising a polynucleotide as
defined herein under conditions suitable for obtaining expression
of the protein.
[0055] The present invention further provides a method of producing
trimers comprising the protein of the invention, which method
comprises introducing into an appropriate cell line a vector
comprising a polynucleotide as defined herein under conditions
suitable for obtaining expression of the protein, and allowing the
protein produced to form into trimers.
[0056] As shown in Example 6, the protein of the invention binds to
B cell lines such as the Burkitt Lymphoma cell line Raji, the B
lymphoma cell line ROMI 8866 and PRM18826. As shown in example 7,
in preparations of whole blood, the protein of the invention binds
only to B cells, not T cells. These examples confirm the presence
of the receptor for the protein of the invention on B cells, and
support the role of the protein of the invention in regulation of
the immune system, and diseases as described above. This is also
supported by the fact that the protein of the invention is strongly
expressed in cells and tissues of the immune system as shown in
example 5.
[0057] One of the first events induced by most members of the TNF
ligand family is activation of NF-.kappa.B. Mukhopadhyay et al
(Journal of Biological Chemistry Vol. 274 issue 23 Jun. 4, 1999, pp
15978-15981) have demonstrated that the protein of the invention
can activate NF-.kappa.B in a dose and time dependent manner. The
range of doses used was 1 pM to 1000 pM. Treatment of cells with as
little as 1 pM of the protein of the invention produced an increase
in NF-.kappa.B activation compared to untreated cells. The
activation of this important transcription factor suggests that the
protein of the invention may be involved in activation of
inflammatory pathways, Molecules that modulate the interaction of
the protein of the invention with its receptor will hence be able
to modulate the activation of NF-.kappa.B and so will be useful in
any diseases that are responsive to modulation of the level of
activity of NF-.kappa.B, for example diseases of the immune system
such as autoimmune disease, inflammatory diseases such as
rheumatoid arthritis, neuronal inflammation and asthma and the
proliferative diseases such as cancer. Mukhophadhyay et al further
demonstrate that activation of NF-.kappa.B in the same system can
be inhibited by antibodies specific to the protein of the
invention. According to Mukhophadhyay et al, the protein of the
invention was incubated with the specific antibodies before being
used to treat cells. In contrast to the previous experiment,
reduced activation of NF-.kappa.B was observed.
[0058] It is postulated that the presence of the antibody affects
the binding of the protein of the invention to its receptor, thus
preventing generation of a signal and consequently reducing
NF-.kappa.B activation. These findings indicate that other
compounds, for example small molecules, which modulate the
interaction between the protein of the invention and its receptor
can be identified in a screen and can be used to modulate
NF-.kappa.B activation and other downstream effects.
[0059] In Example 9, Chromosomal localisation experiments show that
the gene encoding the protein of the invention maps to human
chromosome 13, region q33. No other TNF ligand family members have
been mapped to this region. Abnormalities in this locus have been
characterised in Burkitt Lymphomas as the second most frequent
defect (Berger et al Genes Chromosomes Cancer. 1:115-118). Also, as
shown in Example 6, the protein of the invention binds strongly to
the Burkitt lymphoma cell line Raji, and Schneider et al (as
referenced above) have demonstrated that the soluble form of the
protein of the invention binds strongly to other Burkitt Lymphoma
cell lines such as BJAB, Namalawa, Ramos and JIYOYE.
[0060] Mukhophadhy et al (as referenced above) have demonstrated
that the protein of the invention is able to inhibit the growth of
human tumour cell lines. Activation of NF-.kappa.B is an early
cellular response which is generally followed by cytotoxic effects
to tumour cells. By treating various cell lines with the protein of
the invention and examining them for viability, the authors were
able to show that there is a dose dependent decrease in the
viability of cells in the presence of the protein of the invention.
This was demonstrated for a human histiocytic lymphoma cell line, a
prostate cancer cell line, a colon cancer cell line, a cervical
carcinoma cell line and a breast carcinoma cell line.
[0061] These facts suggest that the protein of the invention may
play an important role in the regulation of tumour development, and
that molecules that can modulate the interaction of the protein of
the invention with its receptor may be useful in the treatment of
cancer. Also, the protein of the invention itself, in its membrane
bound or its soluble form, may be useful in the treatment of
cancer.
[0062] Schneider et al (Journal of Experimental Medicine volume 189
number 11 Jun. 7, 1999 pp 1747-1756) have demonstrated that B cell
growth can be costimulated by the full length protein of the
invention (i.e. the membrane bound form) as well as by the soluble
form of the protein of the invention. Hence either form can be
utilised in therapy, or to form the basis of a screen for small
molecules which can modulate the interaction between the protein of
the invention and its receptor.
BRIEF DESCRIPTION OF THE FIGURES
[0063] FIG. 1 shows sequence ID No. 1--the amino acid sequence of
the soluble human form of the protein of the invention. Receptor
binding sites are shown in bold, and potential N-linked
glycosylation sites are marked with a dot.
[0064] FIG. 2 shows sequence ID No. 2--the amino acid sequence of
the human membrane bound form of the protein of the invention,
which comprises within it the soluble form of Seq ID No. 1.
Annotations are as for FIG. 1. The transmembrane sequence is
underlined.
[0065] FIG. 3 shows sequence ID No. 3--the cDNA nucleotide sequence
which encodes the amino acid sequence of Seq ID No. 9, aligned to
the amino acid sequence of Seq ID No. 9. Receptor binding regions
are boxed, and potential N-linked glycosylation sites are marked
with a dot.
[0066] FIG. 4 shows sequence ID No. 4--the cDNA nucleotide sequence
which encodes the amino acid sequence of Seq ID No. 10, aligned
with the amino acid sequence of Seq ID No. 10. Annotations are as
for FIG. 3. The transmembrane sequence is underlined.
[0067] FIG. 5 shows sequence ID No. 5--the amino acid sequence of
the soluble mouse form of the protein of the invention. The
N-linked glycosylation site is marked with a dot.
[0068] FIG. 6 shows sequence ID No. 6--the amino acid sequence of
the mouse membrane bound form of the protein of the invention.
Annotations are as for FIG. 5. The transmembrane region is
underlined.
[0069] FIG. 7 shows sequence ID No. 7--the cDNA nucleotide sequence
that encodes the amino acid sequence of Seq ID No. 5, aligned with
the amino acid sequence of Seq ID No. 5. Annotations are as for
FIG. 5.
[0070] FIG. 8 shows sequence ID No. 8--the cDNA nucleotide sequence
that encodes the amino acid sequence of Seq ID No. 6, aligned with
the amino acid sequence of Seq ID No. 6. Annotations are as for
FIG. 6.
[0071] FIG. 9 shows an alignment between the mouse and human forms
of the full length form of the protein of the invention. (Seq ID
No. 2 and Seq ID No. 6)
[0072] FIG. 10A Shows analysis of induction of CD40 in the presence
(shaded) or absence (unshaded) of the recombinant soluble human
form of the protein of the invention.
[0073] FIG. 10B Shows analysis of induction of CD40 in the presence
(shaded) or absence (unshaded) IL-4.
[0074] FIG. 11A shows Northern Blot analysis of the tissue specific
expression of the protein of the invention in normal mouse cell
lines and tissues.
[0075] FIG. 11B shows Northern Blot analysis of the tissue specific
expression of the protein of the invention human tumour cell lines
and tissues.
[0076] FIG. 12A shows Northern Blot analysis of the tissue specific
expression of the protein of the invention in immune related
tissue.
[0077] FIG. 12B shows Northern Blot analysis of the tissue specific
expression of the protein of the invention in human tumour cell
lines.
[0078] FIG. 13 shows cell binding data of FLAG-sD7 (as defined in
example 3 below). The shaded area indicates binding to the B-cell
lymphoma cell line RPMI 8866. In the absence of FLAG-sD7 no binding
is seen (dotted line)
[0079] FIG. 14A shows binding of the FLAG-sD7 to CD19+ Bcells in
whole blood, demonstrating the specificity of binding, to B cells
only.
[0080] FIG. 14B shows binding of the FLAG-sD7 to CD3+ Tcells in
whole blood, demonstrating the specificity of binding, to B cells
only.
[0081] FIG. 15A shows gel filtration of recombinant FLAG-sD7.
[0082] FIG. 15B shows the subsequent SDS-PAGE analysis of the
fractions shown in FIG. 15A. These results indicate that the
soluble form of the protein of the invention is able to
trimerise.
[0083] Throughout the examples:
the protein having the amino acid sequence as shown in FIG. 1 will
be termed soluble D7 ligand, and the protein having the amino acid
sequence as shown in FIG. 2 will be termed D7 ligand.
EXAMPLE 1
Use of Soluble D7 Ligand in a Screen to Identify Compounds that
Modulate the Interaction Between the D7 Ligand and its Receptor
[0084] All incubations are done at room temperature
[0085] Costar RIA/EIA high binding plates are coated with goat
anti-human IgG (Sigma 13382) at 2 .mu.g/ml in PBS overnight. The
coating antibody is removed, and the plates are blocked for at
least 2 hours in PBS/2% (w/v) BSA. Plates are then washed three
times with PBS/0.1% (v/v) Tween20.
[0086] 100 .mu.l receptor-Fc (1 .mu.g/ml) in PBS/1% (w/v) BSA/0.1%
(v/v) Tween20 is added, and plates are incubated for 1 hour. Plates
are washed five times with PBS/0.1% (v/v) Tween20.
[0087] Biotin-soluble D7 ligand dilutions in PBS/1% BSA/0.1%
Tween20 are added, and plates are incubated for 1 hour. Plates are
washed five times with PBS/0.1% (v/v) Tween20.
[0088] Streptavidin alkaline phosphatase (1:1000) (Amersham
RPN1234) is added, and plates are incubated for 1 hour. Plates are
washed five times with PBS/0.1% (v/v) Tween20.
[0089] Binding is detected using Life Technologies amplifier
solutions (19589-019).
EXAMPLE 2
A Cell Based Screen to Identify Compounds that Modulate the
Interaction Between the Soluble D7 Ligand and its Receptor
[0090] A general protocol for using a cell based screen to identify
compounds that modulate the interaction between the soluble D7
ligand and its receptor is as follows:
[0091] A B cell line known to bind and respond to the D7 ligand is
treated with recombinant soluble human D7 ligand exemplified (e.g.
FLAG-shD7 as exemplified below) for a defined time.
[0092] Cells are harvested, and the response assayed (The response
may be possibly proliferation, apoptosis, NF-.kappa.B activation or
cytokine production). The assay enables determination of whether
the addition of compounds inhibits the induction of a response in
target cells.
[0093] A specific example is as follows:
[0094] Soluble D7 ligand upregulates CD40
[0095] L3055 Burkitt's lymphoma cell line was grown on a feeder
layer of human foetal fibroblast cells (HFF515) in L3 medium (RPMI
1640+10% Serum Supreme+antibiotics). HEK293 cells were grown in
DMEM supplemented with 10% foetal calf serum and antibiotics. L3055
cells were treated either with control medium (four parts L3 medium
plus one part HEK 293T cell supernatant) or with sD7 medium (four
parts L3 medium plus one part cell supernatant from HEK293T cells
harvested 24 hours after transient transfection with sD7) or with
IL-4 (control medium plus 200 U/ml recombinant human IL-4 [Sigma])
and incubated at 37.degree. C. for 72 hours. Cells were harvested
and washed once in binding buffer then stained with FITC-conjugated
mouse anti-human CD40 (Transduction Laboratories) at room
temperature. The cells were then washed twice in binding buffer
before analysis by flow cytometry. Induction of CD40 was observed
on treatment with sD7 for 72 hours compared to the control. This
assay is repeated in the presence of a molecule which inhibits or
increases the induction of the response in the target cells, and
the results compared. Inhibition/increase of response can be
clearly demonstrated. The end result of CD40 upregulation is that B
cells are signalled for growth and differentiation. Thus, this
experiment supports a role for the D7 ligand in the management of
immune responses, and in diseases of the immune system such as
inflammation.
EXAMPLE 3
Synthesis and Purification of the Soluble D7 Ligand
[0096] Nucleic acid encoding the soluble human D7 ligand (amino
acids 133 to 285) was generated by PCR using the cloned full-length
open reading frame as a template.
[0097] Nucleic acid encoding the soluble human ligand D7 was cloned
into vector pFLAG-CMV-1 (Kodak) (containing a CMV promoter, a
preprotrypsin leader sequence, an amino-terminal FLAG epitope and a
human growth hormone polyA addition sequence) to form construct
pFLAG-CMV-1-hsD7.
[0098] 5.times.10.sup.6 HEK 293T cells were resuspended in 250
.mu.l cytomix (120 mM KCl; 0.15 mM CaCl.sub.2; 10 mM
K.sub.2HPO.sub.4/KH.sub.2PO.sub.4, pH 7.6; 25 mM Hepes, pH 7.6; 2
mM EGTA, pH7.6; 5 mM MgCl.sub.2; 2 mM ATP; 5 mM glutathione; pH
adjusted with KOH) containing 25 .mu.g pFLAG-CMV-1-hsD7.
Transfection was carried out by using a BioRad gene pulser (960
.mu.F, 270V).
[0099] Following transfection, cells were left on ice for 10 min,
then transferred to a 75 cm.sup.2 tissue culture flask containing
15 ml medium (DMEM, 10% FCS, 2 mM L-glutamine, penicillin (5
.mu.g/ml) and streptomycin (5 .mu.g/ml)). Medium containing
secreted ligand was harvested after 48 h and applied to an affinity
chromatography column containing anti-FLAG M2 antibody coupled to
agarose (Kodak). This was washed with Tris-buffered saline (pH 7.4)
and fractions were eluted in 0.1M citrate buffer (pH 2.5).
Fractions were immediately neutralised with 0.2 volumes 1M Tris.HCl
(pH 7.6).
[0100] Fractions containing a human soluble D7 ligand linked to the
FLAG epitope (FLAG-hsD7) were identified by Western blotting using
M2 anti-FLAG antibody. These fractions were pooled, and
concentrated using a Centricon Plus-20 (NWML 5000) column
(Millipore). FLAG-hsD7 ligand was stored at -70.degree.
EXAMPLE 4
Synthesis and Purification of the D7 Ligand
[0101] The open reading frame of human D7 ligand is cloned into
vector pcDNA3 (containing a CMV promoter and a bovine growth
hormone polyA addition signal) to form construct pcDNA3-hD7.
[0102] Plasmid pcDNA3-hD7 is transiently transfected by
electroporation into HEK 293T cells (protocol as in example 3).
[0103] Cells are harvested after 48 h, and homogenised using a
Dounce homogeniser in three volumes of protein extraction buffer
(25 mM Hepes pH 7.4, 0.5% Triton-X-100, 1 "complete" protease
inhibitor cocktail tablet (Boehringer Mannheim) per 50 ml
buffer).
[0104] The D7 ligand is purified by affinity chromatography using
anti-D7 antibody coupled to agarose.
EXAMPLE 5
Northern Blot Analysis of the Tissue Distribution of the D7
Ligand
[0105] cDNA coding for human D7 ligand was excised from pCDNA3-hD7
(see example 4) with the restriction enzymes BamH1 and Xba1. This
cDNA fragment was labelled with .sup.32P dCTP using the Amersham
ready-prime system according to the manufacturers protocol. A 5
.mu.l aliquot of this mixture was mixed with 10 ml Expresshyb
solution (Clontech 8015-1) and the resulting mixture was incubated
with one of the following clontech blots: Mouse (7762-1), Human-1
(#7760), Human Cancer Cell line (#7757) or Human Immune System II
(#7768-1); for 2 hours at 65.degree. C. with shaking. The probe
solution was then removed and the blot was washed successively with
2.times.SSC (saline sodium citrate), 0.05% SDS at room temperature
for three 20 minute periods. This was followed with one wash with
0.1% SSC, 0.1% SDS at room temperature. The blot was then exposed
to Kodak XAR-5 film at -70.degree. C. for 48 hours.
[0106] The results of the Northern blot analysis show that D7
ligand RNA is expressed in heart, lung, spleen, kidney and skeletal
muscle but not brain in both mice (FIG. 111A) and humans (FIG.
11B). A blot of immune-related tissues demonstrates strong
expression of D7 ligand RNA in spleen, lymph node, thymus,
appendix, bone marrow and peripheral blood leukocytes (FIG. 12A)
supporting its potential role as a regulator of immune system
functions. Analysis of RNA from a range of human tumour cell lines
shows expression of D7 ligand RNA in HL-60 promyelocytic leukaemia
cells but not in a range of other tumour cell lines (FIG. 12B). The
presence of D7 ligand in a leukaemic cell line also supports the
fact that the D7 ligand is involved in immune system regulation and
disorders.
EXAMPLE 6
Detection of Cell Surface Binding of FLAG-sD7
[0107] 10.sup.6 cells were incubated with 50 ng FLAG-hsD7 ligand
(see example 3) in binding buffer (PBS/2.5% FCS/0.1% sodium azide)
for 10 minutes at room temperature. After washing once in binding
buffer, cells were incubated with 1 .mu.g anti-FLAG M2 antibody for
10 minutes at room temperature. Cells were washed once in binding
buffer, then incubated with 150 .mu.g phycoerythrin-conjugated
anti-mouse antibody for 10 minutes at room temperature. Following
two further washes in binding buffer, flow cytometry was performed
using a Coulter XL benchtop flow cytometer and data were collected
on 10.sup.4 viable cells.
[0108] Results of one such experiment are shown in FIG. 13. No
significant signal was detectable when any of the lines tested were
treated with anti-FLAG M2 antibody and R-phycoerythrin-conjugated
second antibody only, but after prior treatment with FLAG-sD7, the
signal clearly demonstrates that FLAG-hsD7 binds to the B lymphoma
cell line RPMI 8866. Experiments with other cell lines have shown
that FLAG-hsD7 binds two other B cell lines (RPMI 8226 and Raji)
but does not bind to the T cell lines H9 and Jurkat, or the
myelomonocytic lineage lines HL-60, U937 or THP-1. These results
show that the extracellular domain of human D7 ligand binds to B
cells, supporting its potential role in regulation of the immune
system, and also suggesting that expression of the D7 receptor is
restricted to B cells.
EXAMPLE 7
Detection of Cell Surface Binding of Flag-sD7 in Whole Blood
[0109] Whole blood from healthy volunteers was diluted 1:10 with
3.8% (w/v) sodium citrate. 100 ul was used in each binding assay.
Cell surface binding of FLAG-sD7 was detected as in example 6,
except that the second antibody was Alexa 488-conjugated anti-mouse
IgG (Molecular Probes) and, after one wash, cells were incubated
with 1 .mu.g PE-conjugated mouse anti-human CD3 (Becton Dickinson)
or PE-conjugated mouse anti-human CD19 (Coulter-Immunotech). This
experiment confirms the specificity of binding of FLAG-sD7
demonstrated in Example 6. From FIG. 13 it can be seen that
although both B cells and T cells were present, FLAG-sD7 bound only
the CD19+ Bcells (FIG. 14 A), and not the CD3+ Tcells (FIG. 14 B).
This confirms the specificity of binding to B cells seen with cell
lines, and again suggests that expression of the D7 receptor is
restricted to B cells.
EXAMPLE 8
FLAG-sD7 is Able to Trimerise
[0110] Purified recombinant FLAG-sD7 was fractionated on a Superose
12 column (Pharmacia). Proteins were eluted in PBS and fractions (1
ml) were analysed by Western blotting using anti-FLAG M2 antibody
(Sigma). The column was calibrated with standard proteins:
apoferritin (443 kDa), b-amylase (200 kDa), ADH (150 kDa), BSA (66
kDa), carbonic anhydrase (29 kDa) and cytochrome C (12.5 kDa). FIG.
15 A shows the eluate from the column. FIG. 15 B shows the
fractions containing the peaks seen in FIG. 15A run on an SDS-PAGE.
The SDS-PAGE markers are on the left hand side, indicating that the
denatured protein runs at approximately 22 kDa. The markers on the
top of the gel are the standard proteins used to calibrate the
column, and they show that FLAG-sD7 elutes in the gel filtration
fractions corresponding to a molecular weight of approximately 70
to 25 kDa. These experiments demonstrate that FLAG-sD7 is able to
assemble correctly into a homotrimer, with molecular weight
approximately 3.times.22 kDa.
EXAMPLE 9
FISH Mapping of the D7 Ligand
[0111] Lymphocytes isolated from human blood were cultured in
a-minimal essential medium (a-MEM) supplemented with 10% foetal
calf serum and phytohemagglutinin at 37.degree. C. for 68-72 hours.
The lymphocyte cultures were treated with BrdU (0.18 mg/ml Sigma)
to synchronise the cell population. The synchronised cells were
washed three times with serum free medium to release the block and
recultured at 37.degree. C. for 6 hours in a-MEM with thymidine
(2.5 .mu.g/ml Sigma). Cells were harvested and slides were made by
using standard procedures including hypotonic treatment, fixation
and air-dry.
[0112] Slides were baked at 55.degree. C. for 1 hour. After RNase
treatment, the slides were denatured in 70% formamide in
2.times.SSC for 2 min at 70.degree. C. followed by dehydration with
ethanol. D7-27 DNA probe which is the full length D7 cDNA as shown
in FIG. 4, plus 150 nucleotides of 5' untranslated region and 50 nt
of 3' untranslated region) was biotinylated with dATP, and probes
were denatured at 75.degree. C. for 5 min. in a hybridisation mix
consisting of 50% formamide and 10% dextran sulphate. Probes were
loaded on the denatured chromosomal slides. After over night
hybridisation, slides were washed and detected as well as
amplified. FISH signals and the DAPI banding was recorded
separately by taking photographs, and the assignment of the FISH
mapping data with chromosomal bands was achieved by superimposing
DISH signals with DAPI banded chromosomes. The DAPI banding showed
that the signal mapped to human chromosome 13, and the FISH results
further mapped it to region q33.
Sequence CWU 1
1
101153PRTHomo sapiens 1Arg Ala Val Gln Gly Pro Glu Glu Thr Val Thr
Gln Asp Cys Leu Gln 1 5 10 15 Leu Ile Ala Asp Ser Glu Thr Pro Thr
Ile Gln Lys Gly Ser Tyr Thr 20 25 30 Phe Val Pro Trp Leu Leu Ser
Phe Lys Arg Gly Ser Ala Leu Glu Glu 35 40 45 Lys Glu Asn Lys Ile
Leu Val Lys Glu Thr Gly Tyr Phe Phe Ile Tyr 50 55 60 Gly Gln Val
Leu Tyr Thr Asp Lys Thr Tyr Ala Met Gly His Leu Ile 65 70 75 80 Gln
Arg Lys Lys Val His Val Phe Gly Asp Glu Leu Ser Leu Val Thr 85 90
95 Leu Phe Arg Cys Ile Gln Asn Met Pro Glu Thr Leu Pro Asn Asn Ser
100 105 110 Cys Tyr Ser Ala Gly Ile Ala Lys Leu Glu Glu Gly Asp Glu
Leu Gln 115 120 125 Leu Ala Ile Pro Arg Glu Asn Ala Gln Ile Ser Leu
Asp Gly Asp Val 130 135 140 Thr Phe Phe Gly Ala Leu Lys Leu Leu 145
150 2285PRTHomo sapiens 2Met Asp Asp Ser Thr Glu Arg Glu Gln Ser
Arg Leu Thr Ser Cys Leu 1 5 10 15 Lys Lys Arg Glu Glu Met Lys Leu
Lys Glu Cys Val Ser Ile Leu Pro 20 25 30 Arg Lys Glu Ser Pro Ser
Val Arg Ser Ser Lys Asp Gly Lys Leu Leu 35 40 45 Ala Ala Thr Leu
Leu Leu Ala Leu Leu Ser Cys Cys Leu Thr Val Val 50 55 60 Ser Phe
Tyr Gln Val Ala Ala Leu Gln Gly Asp Leu Ala Ser Leu Arg 65 70 75 80
Ala Glu Leu Gln Gly His His Ala Glu Lys Leu Pro Ala Gly Ala Gly 85
90 95 Ala Pro Lys Ala Gly Leu Glu Glu Ala Pro Ala Val Thr Ala Gly
Leu 100 105 110 Lys Ile Phe Glu Pro Pro Ala Pro Gly Glu Gly Asn Ser
Ser Gln Asn 115 120 125 Ser Arg Asn Lys Arg Ala Val Gln Gly Pro Glu
Glu Thr Val Thr Gln 130 135 140 Asp Cys Leu Gln Leu Ile Ala Asp Ser
Glu Thr Pro Thr Ile Gln Lys 145 150 155 160 Gly Ser Tyr Thr Phe Val
Pro Trp Leu Leu Ser Phe Lys Arg Gly Ser 165 170 175 Ala Leu Glu Glu
Lys Glu Asn Lys Ile Leu Val Lys Glu Thr Gly Tyr 180 185 190 Phe Phe
Ile Tyr Gly Gln Val Leu Tyr Thr Asp Lys Thr Tyr Ala Met 195 200 205
Gly His Leu Ile Gln Arg Lys Lys Val His Val Phe Gly Asp Glu Leu 210
215 220 Ser Leu Val Thr Leu Phe Arg Cys Ile Gln Asn Met Pro Glu Thr
Leu 225 230 235 240 Pro Asn Asn Ser Cys Tyr Ser Ala Gly Ile Ala Lys
Leu Glu Glu Gly 245 250 255 Asp Glu Leu Gln Leu Ala Ile Pro Arg Glu
Asn Ala Gln Ile Ser Leu 260 265 270 Asp Gly Asp Val Thr Phe Phe Gly
Ala Leu Lys Leu Leu 275 280 285 3462DNAHomo sapiensCDS(1)..(462)
3cgt gcc gtt cag ggt cca gaa gaa aca gtc act caa gac tgc ttg caa
48Arg Ala Val Gln Gly Pro Glu Glu Thr Val Thr Gln Asp Cys Leu Gln1
5 10 15 ctg att gca gac agt gaa aca cca act ata caa aaa gga tct tac
aca 96Leu Ile Ala Asp Ser Glu Thr Pro Thr Ile Gln Lys Gly Ser Tyr
Thr 20 25 30 ttt gtt cca tgg ctt ctc agc ttt aaa agg gga agt gcc
cta gaa gaa 144Phe Val Pro Trp Leu Leu Ser Phe Lys Arg Gly Ser Ala
Leu Glu Glu 35 40 45 aaa gag aat aaa ata ttg gtc aaa gaa act ggt
tac ttt ttt ata tat 192Lys Glu Asn Lys Ile Leu Val Lys Glu Thr Gly
Tyr Phe Phe Ile Tyr 50 55 60 ggt cag gtt tta tat act gat aag acc
tac gcc atg gga cat cta att 240Gly Gln Val Leu Tyr Thr Asp Lys Thr
Tyr Ala Met Gly His Leu Ile65 70 75 80cag agg aag aag gtc cat gtc
ttt ggg gat gaa ttg agt ctg gtg act 288Gln Arg Lys Lys Val His Val
Phe Gly Asp Glu Leu Ser Leu Val Thr 85 90 95 ttg ttt cga tgt att
caa aat atg cct gaa aca cta ccc aat aat tcc 336Leu Phe Arg Cys Ile
Gln Asn Met Pro Glu Thr Leu Pro Asn Asn Ser 100 105 110 tgc tat tca
gct ggc att gca aaa ctg gaa gaa gga gat gga ctc caa 384Cys Tyr Ser
Ala Gly Ile Ala Lys Leu Glu Glu Gly Asp Gly Leu Gln 115 120 125 ctt
gca ata cca aga gaa aat gca caa ata tca ctg gat gga gat gtc 432Leu
Ala Ile Pro Arg Glu Asn Ala Gln Ile Ser Leu Asp Gly Asp Val 130 135
140 aca ttt ttt ggt gca ttg aaa ctg ctg tga 462Thr Phe Phe Gly Ala
Leu Lys Leu Leu 145 150 4858DNAHomo sapiensCDS(1)..(858) 4atg gat
gac tcc aca gaa agg gag cag tca cgc ctt act tct tgc ctt 48Met Asp
Asp Ser Thr Glu Arg Glu Gln Ser Arg Leu Thr Ser Cys Leu1 5 10 15
aag aaa aga gaa gaa atg aaa ctg aag gag tgt gtt tcc atc ctc cca
96Lys Lys Arg Glu Glu Met Lys Leu Lys Glu Cys Val Ser Ile Leu Pro
20 25 30 cgg aag gaa agc ccc tct gtc cga tcc tcc aaa gac gga aag
ctg ctg 144Arg Lys Glu Ser Pro Ser Val Arg Ser Ser Lys Asp Gly Lys
Leu Leu 35 40 45 gct gca acc ttg ctg ctg gca ctg ctg tct tgc tgc
ctc acg gtg gtg 192Ala Ala Thr Leu Leu Leu Ala Leu Leu Ser Cys Cys
Leu Thr Val Val 50 55 60 tct ttc tac cag gtg gcc gcc ctg caa ggg
gac ctg gcc agc ctc cgg 240Ser Phe Tyr Gln Val Ala Ala Leu Gln Gly
Asp Leu Ala Ser Leu Arg65 70 75 80gca gag ctg cag ggc cac cac gcg
gag aag ctg cca gca gga gca gga 288Ala Glu Leu Gln Gly His His Ala
Glu Lys Leu Pro Ala Gly Ala Gly 85 90 95 gcc ccc aag gcc ggc ctg
gag gaa gct cca gct gtc acc gcg gga ctg 336Ala Pro Lys Ala Gly Leu
Glu Glu Ala Pro Ala Val Thr Ala Gly Leu 100 105 110 aaa atc ttt gaa
cca cca gct cca gga gaa ggc aac tcc agt cag aac 384Lys Ile Phe Glu
Pro Pro Ala Pro Gly Glu Gly Asn Ser Ser Gln Asn 115 120 125 agc aga
aat aag cgt gcc gtt cag ggt cca gaa gaa aca gtc act caa 432Ser Arg
Asn Lys Arg Ala Val Gln Gly Pro Glu Glu Thr Val Thr Gln 130 135 140
gac tgc ttg caa ctg att gca gac agt gaa aca cca act ata caa aaa
480Asp Cys Leu Gln Leu Ile Ala Asp Ser Glu Thr Pro Thr Ile Gln
Lys145 150 155 160gga tct tac aca ttt gtt cca tgg ctt ctc agc ttt
aaa agg gga agt 528Gly Ser Tyr Thr Phe Val Pro Trp Leu Leu Ser Phe
Lys Arg Gly Ser 165 170 175 gcc cta gaa gaa aaa gag aat aaa ata ttg
gtc aaa gaa act ggt tac 576Ala Leu Glu Glu Lys Glu Asn Lys Ile Leu
Val Lys Glu Thr Gly Tyr 180 185 190 ttt ttt ata tat ggt cag gtt tta
tat act gat aag acc tac gcc atg 624Phe Phe Ile Tyr Gly Gln Val Leu
Tyr Thr Asp Lys Thr Tyr Ala Met 195 200 205 gga cat cta att cag agg
aag aag gtc cat gtc ttt ggg gat gaa ttg 672Gly His Leu Ile Gln Arg
Lys Lys Val His Val Phe Gly Asp Glu Leu 210 215 220 agt ctg gtg act
ttg ttt cga tgt att caa aat atg cct gaa aca cta 720Ser Leu Val Thr
Leu Phe Arg Cys Ile Gln Asn Met Pro Glu Thr Leu225 230 235 240ccc
aat aat tcc tgc tat tca gct ggc att gca aaa ctg gaa gaa gga 768Pro
Asn Asn Ser Cys Tyr Ser Ala Gly Ile Ala Lys Leu Glu Glu Gly 245 250
255 gat gga ctc caa ctt gca ata cca aga gaa aat gca caa ata tca ctg
816Asp Gly Leu Gln Leu Ala Ile Pro Arg Glu Asn Ala Gln Ile Ser Leu
260 265 270 gat gga gat gtc aca ttt ttt ggt gca ttg aaa ctg ctg tga
858Asp Gly Asp Val Thr Phe Phe Gly Ala Leu Lys Leu Leu 275 280 285
5144PRTMus sp. 5Ile Ile Gln Asp Cys Leu Gln Leu Ile Ala Asp Ser Asp
Thr Pro Thr 1 5 10 15 Ile Arg Lys Gly Thr Tyr Thr Phe Val Pro Trp
Leu Leu Ser Phe Lys 20 25 30 Arg Gly Asn Ala Leu Glu Glu Lys Glu
Asn Lys Ile Val Val Arg Gln 35 40 45 Thr Gly Tyr Phe Phe Ile Tyr
Ser Gln Val Leu Tyr Thr Asp Pro Ile 50 55 60 Phe Ala Met Gly His
Val Ile Gln Arg Lys Lys Val His Val Phe Gly 65 70 75 80 Asp Glu Leu
Ser Leu Val Thr Leu Phe Arg Cys Ile Gln Asn Met Pro 85 90 95 Lys
Thr Leu Pro Asn Asn Ser Cys Tyr Ser Ala Gly Ile Ala Arg Leu 100 105
110 Glu Glu Gly Asp Glu Ile Gln Leu Ala Ile Pro Arg Glu Asn Ala Gln
115 120 125 Ile Ser Arg Asn Gly Asp Asp Thr Phe Phe Gly Ala Leu Lys
Leu Leu 130 135 140 6309PRTMus sp. 6Met Asp Glu Ser Ala Lys Thr Leu
Pro Pro Pro Cys Leu Cys Phe Cys 1 5 10 15 Ser Glu Lys Gly Glu Asp
Met Lys Val Gly Tyr Asp Pro Ile Thr Pro 20 25 30 Gln Lys Glu Glu
Gly Ala Trp Phe Gly Ile Cys Arg Asp Gly Arg Leu 35 40 45 Leu Ala
Ala Thr Leu Leu Leu Ala Leu Leu Ser Ser Ser Phe Thr Ala 50 55 60
Met Ser Leu Tyr Gln Leu Ala Ala Leu Gln Ala Asp Leu Met Asn Leu 65
70 75 80 Arg Met Glu Leu Gln Ser Tyr Arg Gly Ser Ala Thr Pro Ala
Ala Ala 85 90 95 Gly Ala Pro Glu Leu Thr Ala Gly Val Lys Leu Leu
Thr Pro Ala Ala 100 105 110 Pro Arg Pro His Asn Ser Ser Arg Gly His
Arg Asn Arg Arg Ala Phe 115 120 125 Gln Gly Pro Glu Glu Thr Glu Gln
Asp Val Asp Leu Ser Ala Pro Pro 130 135 140 Ala Pro Cys Leu Pro Gly
Cys Arg His Ser Gln His Asp Asp Asn Gly 145 150 155 160 Met Asn Leu
Arg Asn Ile Ile Gln Asp Cys Leu Gln Leu Ile Ala Asp 165 170 175 Ser
Asp Thr Pro Thr Ile Arg Lys Gly Thr Tyr Thr Phe Val Pro Trp 180 185
190 Leu Leu Ser Phe Lys Arg Gly Asn Ala Leu Glu Glu Lys Glu Asn Lys
195 200 205 Ile Val Val Arg Gln Thr Gly Tyr Phe Phe Ile Tyr Ser Gln
Val Leu 210 215 220 Tyr Thr Asp Pro Ile Phe Ala Met Gly His Val Ile
Gln Arg Lys Lys 225 230 235 240 Val His Val Phe Gly Asp Glu Leu Ser
Leu Val Thr Leu Phe Arg Cys 245 250 255 Ile Gln Asn Met Pro Lys Thr
Leu Pro Asn Asn Ser Cys Tyr Ser Ala 260 265 270 Gly Ile Ala Arg Leu
Glu Glu Gly Asp Glu Ile Gln Leu Ala Ile Pro 275 280 285 Arg Glu Asn
Ala Gln Ile Ser Arg Asn Gly Asp Asp Thr Phe Phe Gly 290 295 300 Ala
Leu Lys Leu Leu 305 7435DNAMus sp.CDS(1)..(435) 7atc att caa gac
tgt ctg cag ctg att gca gac agc gac acg ccg act 48Ile Ile Gln Asp
Cys Leu Gln Leu Ile Ala Asp Ser Asp Thr Pro Thr1 5 10 15 ata cga
aaa gga act tac aca ttt gtt cca tgg ctt ctc agc ttt aaa 96Ile Arg
Lys Gly Thr Tyr Thr Phe Val Pro Trp Leu Leu Ser Phe Lys 20 25 30
aga gga aat gcc ttg gag gag aaa gag aac aaa ata gtg gtg agg caa
144Arg Gly Asn Ala Leu Glu Glu Lys Glu Asn Lys Ile Val Val Arg Gln
35 40 45 aca ggc tat ttc ttc atc tac agc cag gtt cta tac acg gac
ccc atc 192Thr Gly Tyr Phe Phe Ile Tyr Ser Gln Val Leu Tyr Thr Asp
Pro Ile 50 55 60 ttt gct atg ggt cat gtc atc cag agg aag aaa gta
cac gtc ttt ggg 240Phe Ala Met Gly His Val Ile Gln Arg Lys Lys Val
His Val Phe Gly65 70 75 80gac gag ctg agc ctg gtg acc ctg ttc cga
tgt att cag aat atg ccc 288Asp Glu Leu Ser Leu Val Thr Leu Phe Arg
Cys Ile Gln Asn Met Pro 85 90 95 aaa aca ctg ccc aac aat tcc tgc
tac tcg gct ggc atc gcg agg ctg 336Lys Thr Leu Pro Asn Asn Ser Cys
Tyr Ser Ala Gly Ile Ala Arg Leu 100 105 110 gaa gaa gga gat gag att
cag ctt gca att cct cgg gag aat gca cag 384Glu Glu Gly Asp Glu Ile
Gln Leu Ala Ile Pro Arg Glu Asn Ala Gln 115 120 125 att tca cgc aac
gga gac gac acc ttc ttt ggt gcc cta aaa ctg ctg 432Ile Ser Arg Asn
Gly Asp Asp Thr Phe Phe Gly Ala Leu Lys Leu Leu 130 135 140 taa
4358930DNAMus sp.CDS(1)..(930) 8atg gat gag tct gca aag acc ctg cca
cca ccg tgc ctc tgt ttt tgc 48Met Asp Glu Ser Ala Lys Thr Leu Pro
Pro Pro Cys Leu Cys Phe Cys1 5 10 15 tcc gag aaa gga gaa gat atg
aaa gtg gga tat gat ccc atc act ccg 96Ser Glu Lys Gly Glu Asp Met
Lys Val Gly Tyr Asp Pro Ile Thr Pro 20 25 30 cag aag gag gag ggt
gcc tgg ttt ggg atc tgc agg gat gga agg ctg 144Gln Lys Glu Glu Gly
Ala Trp Phe Gly Ile Cys Arg Asp Gly Arg Leu 35 40 45 ctg gct gct
acc ctc ctg ctg gcc ctg ttg tcc agc agt ttc aca gcg 192Leu Ala Ala
Thr Leu Leu Leu Ala Leu Leu Ser Ser Ser Phe Thr Ala 50 55 60 atg
tcc ttg tac cag ttg gct gcc ttg caa gca gac ctg atg aac ctg 240Met
Ser Leu Tyr Gln Leu Ala Ala Leu Gln Ala Asp Leu Met Asn Leu65 70 75
80cgc atg gag ctg cag agc tac cga ggt tca gca aca cca gcc gcc gcg
288Arg Met Glu Leu Gln Ser Tyr Arg Gly Ser Ala Thr Pro Ala Ala Ala
85 90 95 ggt gct cca gag ttg acc gct gga gtc aaa ctc ctg acg ccg
gca gct 336Gly Ala Pro Glu Leu Thr Ala Gly Val Lys Leu Leu Thr Pro
Ala Ala 100 105 110 cct cga ccc cac aac tcc agc cgc ggc cac agg aac
aga cgc gct ttc 384Pro Arg Pro His Asn Ser Ser Arg Gly His Arg Asn
Arg Arg Ala Phe 115 120 125 cag gga cca gag gaa aca gaa caa gat gta
gac ctc tca gct cct cct 432Gln Gly Pro Glu Glu Thr Glu Gln Asp Val
Asp Leu Ser Ala Pro Pro 130 135 140 gca cca tgc ctg cct gga tgc cgc
cat tct caa cat gat gat aat gga 480Ala Pro Cys Leu Pro Gly Cys Arg
His Ser Gln His Asp Asp Asn Gly145 150 155 160atg aac ctc aga aac
atc att caa gac tgt ctg cag ctg att gca gac 528Met Asn Leu Arg Asn
Ile Ile Gln Asp Cys Leu Gln Leu Ile Ala Asp 165 170 175 agc gac acg
ccg act ata cga aaa gga act tac aca ttt gtt cca tgg 576Ser Asp Thr
Pro Thr Ile Arg Lys Gly Thr Tyr Thr Phe Val Pro Trp 180 185 190 ctt
ctc agc ttt aaa aga gga aat gcc ttg gag gag aaa gag aac aaa 624Leu
Leu Ser Phe Lys Arg Gly Asn Ala Leu Glu Glu Lys Glu Asn Lys 195 200
205 ata gtg gtg agg caa aca ggc tat ttc ttc atc tac agc cag gtt cta
672Ile Val Val Arg Gln Thr Gly Tyr Phe Phe Ile Tyr Ser Gln Val Leu
210 215 220 tac acg gac ccc atc ttt gct atg ggt cat gtc atc cag agg
aag aaa 720Tyr Thr Asp Pro Ile Phe Ala Met Gly His Val Ile Gln Arg
Lys Lys225 230 235 240gta cac gtc ttt ggg gac gag ctg agc ctg gtg
acc ctg ttc cga tgt 768Val His Val Phe Gly Asp Glu Leu Ser Leu Val
Thr Leu Phe Arg Cys 245 250 255 att cag aat atg ccc aaa aca ctg ccc
aac aat tcc tgc tac tcg gct 816Ile Gln Asn Met Pro Lys Thr Leu Pro
Asn Asn Ser Cys Tyr Ser Ala 260 265 270 ggc atc gcg agg
ctg gaa gaa gga gat gag att cag ctt gca att cct 864Gly Ile Ala Arg
Leu Glu Glu Gly Asp Glu Ile Gln Leu Ala Ile Pro 275 280 285 cgg gag
aat gca cag att tca cgc aac gga gac gac acc ttc ttt ggt 912Arg Glu
Asn Ala Gln Ile Ser Arg Asn Gly Asp Asp Thr Phe Phe Gly 290 295 300
gcc cta aaa ctg ctg taa 930Ala Leu Lys Leu Leu 305 9153PRTHomo
sapiens 9Arg Ala Val Gln Gly Pro Glu Glu Thr Val Thr Gln Asp Cys
Leu Gln 1 5 10 15 Leu Ile Ala Asp Ser Glu Thr Pro Thr Ile Gln Lys
Gly Ser Tyr Thr 20 25 30 Phe Val Pro Trp Leu Leu Ser Phe Lys Arg
Gly Ser Ala Leu Glu Glu 35 40 45 Lys Glu Asn Lys Ile Leu Val Lys
Glu Thr Gly Tyr Phe Phe Ile Tyr 50 55 60 Gly Gln Val Leu Tyr Thr
Asp Lys Thr Tyr Ala Met Gly His Leu Ile 65 70 75 80 Gln Arg Lys Lys
Val His Val Phe Gly Asp Glu Leu Ser Leu Val Thr 85 90 95 Leu Phe
Arg Cys Ile Gln Asn Met Pro Glu Thr Leu Pro Asn Asn Ser 100 105 110
Cys Tyr Ser Ala Gly Ile Ala Lys Leu Glu Glu Gly Asp Gly Leu Gln 115
120 125 Leu Ala Ile Pro Arg Glu Asn Ala Gln Ile Ser Leu Asp Gly Asp
Val 130 135 140 Thr Phe Phe Gly Ala Leu Lys Leu Leu 145 150
10285PRTHomo sapiens 10Met Asp Asp Ser Thr Glu Arg Glu Gln Ser Arg
Leu Thr Ser Cys Leu 1 5 10 15 Lys Lys Arg Glu Glu Met Lys Leu Lys
Glu Cys Val Ser Ile Leu Pro 20 25 30 Arg Lys Glu Ser Pro Ser Val
Arg Ser Ser Lys Asp Gly Lys Leu Leu 35 40 45 Ala Ala Thr Leu Leu
Leu Ala Leu Leu Ser Cys Cys Leu Thr Val Val 50 55 60 Ser Phe Tyr
Gln Val Ala Ala Leu Gln Gly Asp Leu Ala Ser Leu Arg 65 70 75 80 Ala
Glu Leu Gln Gly His His Ala Glu Lys Leu Pro Ala Gly Ala Gly 85 90
95 Ala Pro Lys Ala Gly Leu Glu Glu Ala Pro Ala Val Thr Ala Gly Leu
100 105 110 Lys Ile Phe Glu Pro Pro Ala Pro Gly Glu Gly Asn Ser Ser
Gln Asn 115 120 125 Ser Arg Asn Lys Arg Ala Val Gln Gly Pro Glu Glu
Thr Val Thr Gln 130 135 140 Asp Cys Leu Gln Leu Ile Ala Asp Ser Glu
Thr Pro Thr Ile Gln Lys 145 150 155 160 Gly Ser Tyr Thr Phe Val Pro
Trp Leu Leu Ser Phe Lys Arg Gly Ser 165 170 175 Ala Leu Glu Glu Lys
Glu Asn Lys Ile Leu Val Lys Glu Thr Gly Tyr 180 185 190 Phe Phe Ile
Tyr Gly Gln Val Leu Tyr Thr Asp Lys Thr Tyr Ala Met 195 200 205 Gly
His Leu Ile Gln Arg Lys Lys Val His Val Phe Gly Asp Glu Leu 210 215
220 Ser Leu Val Thr Leu Phe Arg Cys Ile Gln Asn Met Pro Glu Thr Leu
225 230 235 240 Pro Asn Asn Ser Cys Tyr Ser Ala Gly Ile Ala Lys Leu
Glu Glu Gly 245 250 255 Asp Gly Leu Gln Leu Ala Ile Pro Arg Glu Asn
Ala Gln Ile Ser Leu 260 265 270 Asp Gly Asp Val Thr Phe Phe Gly Ala
Leu Lys Leu Leu 275 280 285
* * * * *