U.S. patent application number 14/504195 was filed with the patent office on 2015-04-02 for compositions and methods for reducing fucosylation of glycoproteins in insect cells and methods of use thereof for production of recombinant glycoproteins.
The applicant listed for this patent is THE UNIVERSITY OF WYOMING. Invention is credited to DONALD L. JARVIS, HIDEAKI MABASHI-ASAZUMA.
Application Number | 20150093782 14/504195 |
Document ID | / |
Family ID | 52740526 |
Filed Date | 2015-04-02 |
United States Patent
Application |
20150093782 |
Kind Code |
A1 |
MABASHI-ASAZUMA; HIDEAKI ;
et al. |
April 2, 2015 |
COMPOSITIONS AND METHODS FOR REDUCING FUCOSYLATION OF GLYCOPROTEINS
IN INSECT CELLS AND METHODS OF USE THEREOF FOR PRODUCTION OF
RECOMBINANT GLYCOPROTEINS
Abstract
Compositions for reducing fucosylation of glycoproteins in
insect cells are provided. Also disclosed are methods of use of
such compositions for the production of recombinant humanized
proteins.
Inventors: |
MABASHI-ASAZUMA; HIDEAKI;
(LARAMIE, WY) ; JARVIS; DONALD L.; (LARAMIE,
WY) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
THE UNIVERSITY OF WYOMING |
LARAMIE |
WY |
US |
|
|
Family ID: |
52740526 |
Appl. No.: |
14/504195 |
Filed: |
October 1, 2014 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
|
|
61885294 |
Oct 1, 2013 |
|
|
|
Current U.S.
Class: |
435/69.6 ;
435/320.1; 435/348; 435/69.1 |
Current CPC
Class: |
C12Y 101/01281 20130101;
C12N 9/0006 20130101; C12P 21/005 20130101; C07K 2317/14 20130101;
C07K 2317/41 20130101; A61K 38/00 20130101; C07K 16/2887 20130101;
C07K 2317/24 20130101 |
Class at
Publication: |
435/69.6 ;
435/320.1; 435/348; 435/69.1 |
International
Class: |
C12N 9/04 20060101
C12N009/04; C12P 21/00 20060101 C12P021/00 |
Goverment Interests
STATEMENT OF RIGHTS TO INVENTIONS MADE UNDER FEDERALLY SPONSORED
RESEARCH
[0002] Pursuant to 35 U.S.C. .sctn.202(c) it is acknowledged that
the U.S. Government has rights in the invention described, which
was made with funds from the National Institutes of Health,
R01GM49734.
Claims
1. A recombinant baculovirus expression vector for transient
expression of GDP-4-dehydro-6-deoxy-D-mannose reductase (RMD) in an
insect cell, said vector comprising the following operably linked
components, i) an expression control sequence functional early in
infection operably linked to a codon optimized RMD encoding nucleic
acid; and ii) an insertion site suitable for insertion of one or
more nucleic acids encoding at least one heterologous protein of
interest.
2. The recombinant baculovirus expression vector of claim 1, which
is AcRMD.
3. The recombinant baculovirus expression vector of claim 1 or
claim 2 comprising a nucleic acid sequence encoding a heterologous
protein of interest operably linked to a promoter active later in
infection. inserted at said insertion site.
4. The recombinant baculovirus expression vector of claim 1,
wherein said expression control sequence is selected from the group
consisting of a constitutive promoter and an inducible
promoter.
5. The recombinant baculovirus expression vector of claim 4,
wherein said constitutive promoter is a baculovirus immediate early
promoter selected from the group consisting of ie1, ie2, ie0, et1,
and gp64,insect actin, tubulin, a ubiquitin promoter; RSV promoter,
copia, gypsy promoter and a cytomegalovirus IE promoter.
6. The recombinant baculovirus expression vector of claim 4,
wherein said inducible promoter is selected from the group
consisting of baculovirus delayed early, late, and very late
promoters, an hsp70 promoter, a metallothionein promoter and a
tetracycline-regulated promoter.
7. The recombinant baculovirus expression vector of claim 3,
wherein said nucleic acid encoding said at least one heterologous
protein of interest comprises a promoter selected from the group
consisting of a promoter from baculovirus delayed early, late, and
very late promoters.
8. The recombinant baculovirus expression vector of claim 4,
wherein said expression control sequence comprises a promoter and
an enhancer element that increases activity of said promoter.
9. The recombinant baculovirus expression vector of claim 3,
wherein said protein of interest is a therapeutic protein.
10. The recombinant baculovirus expression vector of claim 9,
wherein said protein of interest is selected from the group
consisting of an antibody, a subunit vaccine, an antibiotic, a
cytokine, an anticoagulant, a viral antigen, an enzyme, a hormone,
and a blood clotting factor.
11. An infected insect cell comprising the recombinant baculoviral
vector of claim 1 or claim 3, selected from the group consisting of
Sf9, Sf21, expresSF+.RTM., Tn368, High Five.RTM., Tni PRO.RTM.,
Ea4, Ao38, BmN, S2, and S2R+.
12. A method for producing at least one molecule of interest
lacking fucose, comprising: a) providing insect cells; b)
introducing a baculovirus comprising at least one nucleic acid
molecule encoding the enzyme GDP-4-dehydro-6-deoxy-D-mannose
reductase (RMD) operably driven by an immediate early expression
control sequence for expression immediately after infection or an
inducible promoter, thereby stabilizing inhibition of fucosylation,
and at least one additional nucleic acid molecule encoding at least
one heterologous protein of interest driven by an promoter active
later in infection, thereby producing non-fucosylated proteins
wherein said additional nucleic acid is present on the same
baculovirus encoding RMD or is present on a second baculovirus
vector; c) incubating under conditions wherein
GDP-4-dehydro-6-deoxy-D-mannose reductase blocks the production of
GDP-L-fucose, and said at least one protein of interest is produced
lacking fucose; and d) isolating said at least one protein of
interest.
13. The method of claim 12, wherein said RMD enzyme and said
protein of interest are encoded by a single recombinant baculoviral
vector and expressed sequentially at earlier and later times of
infection.
14. The method of claim 12, wherein said nucleic acid encoding said
enzyme and said protein of interest are on separate baculovirus
vectors and expressed sequentially at earlier and later times of
infection.
15. The method of claim 12, wherein said protein of interest is a
therapeutic protein.
16. The method of claim 15, wherein said therapeutic protein is
selected from the group consisting of an antibody, a subunit
vaccine, an antibiotic, a cytokine, an anticoagulant, a viral
antigen, an enzyme, a hormone, and a blood clotting factor.
17. The method of claim 16, wherein said therapeutic protein is an
antibody.
18. A kit for the production of at least one protein of interest
lacking fucose or with a reduced amount of fucose comprising at
least one recombinant baculovirus comprising at least one nucleic
acid molecule encoding the enzyme GDP-4-dehydro-6-deoxy-D-mannose
reductase (RMD) operably driven by an immediate early expression
control sequence for expression early after infection, thereby
stabilizing inhibition of fucosylation, and an insertion site for
at least one additional nucleic acid molecule encoding at least one
protein of interest operably driven by a control sequence for
expression later in infection for production of non-fucosylated
proteins of interest.
19. The kit of claim 18, further comprising insect cells.
20. The kit of claim 18, further comprising a second baculoviral
vector comprising a promoter suitable to drive expression of said
protein of interest later in in infection and an insertion site for
insertion of a nucleic acid encoding said protein of interest. 21.
The kit of claim 18, wherein said protein of interest is selected
from the group consisting of an antibody, cytokine, blood clotting
factor, anticoagulant, viral antigen, enzyme, receptor, vaccine,
subunit vaccine, and hormone.
22. A method for production of a non-fucosylated protein in insect
larvae, comprising a) providing insect larvae; b) introducing a
baculovirus comprising at least one nucleic acid molecule encoding
the enzyme GDP-4-dehydro-6-deoxy-D-mannose reductase (RMD) operably
driven by an immediate early expression control sequence for
expression immediately after infection or an inducible promoter,
thereby stabilizing inhibition of fucosylation, and at least one
additional nucleic acid molecule encoding at least one protein of
interest driven by an expression control sequence active later in
infection, thereby producing non-fucosylated proteins wherein said
additional nucleic acid is present on the same baculovirus encoding
RMD or is present on a second baculovirus vector; c) incubating
under conditions wherein GDP-4-dehydro-6-deoxy-D-mannose reductase
blocks the production of GDP-L-fucose, and said at least one
protein of interest is produced lacking fucose; and d) isolating
said protein of interest.
23. The recombinant baculovirus vector of claim 8, wherein said
enhancer is hr5.
Description
PRIORITY CLAIM
[0001] This application claims priority to U.S. Provisional
Application Number 61/885,294 filed Oct. 1, 2013. This application
is incorporated herein by reference as though set forth in
full.
FIELD OF THE INVENTION
[0003] This invention relates to the fields of molecular biology
and production of glycoproteins lacking fucosylation. More
specifically, the invention provides compositions and methods for
expressing a GDP-4-dehydro-6-deoxy-D-mannose reductase enzyme
encoded by a recombinant baculovirus vector that blocks the
production of GDP-L-fucose and generates a molecule lacking or
having a reduced amount of fucose.
BACKGROUND OF THE INVENTION
[0004] Numerous publications and patent documents, including both
published applications and issued patents, are cited throughout the
specification in order to describe the state of the art to which
this invention pertains. Each of these citations is incorporated
herein by reference as though set forth in full.
[0005] In view of bioinformatic analyses suggesting that well over
half of all human proteins are glycosylated, the ability to support
glycosylation is an increasingly significant attribute of
recombinant protein production systems, including insect-based
systems, such as the baculovirus-insect cell system (reviewed by
Jarvis 2009; Usami et al. 2010). The native human protein
glycosylation process often results in the addition of terminally
sialylated N-glycans that dramatically influence key properties,
such as the in vivo half-lives, of glycoproteins in the human body
(Ngantung et al. 2006; reviewed by Varki and Gagneux 2012). Most
investigators know that insect-based systems, including the
baculovirus-insect cell expression system, support recombinant
protein glycosylation, but it is also important to recognize that
these systems cannot produce human-type, terminally sialylated
N-glycans (Marchal et al. 2001; Hillar and Jarvis 2010). This
limitation has been addressed by glycoengineering baculovirus
vectors and/or insect cell lines to encode and express mammalian
glycogenes that extend endogenous insect cell N-glycan processing
capabilities (Jarvis and Finn 1996; Wagner et al. 1996; Hollister
et al. 1998; Ailor et al. 2000; Seo et al. 2001; Jarvis et al.
2001; Hollister and Jarvis 2001; Hollister et al. 2002; Aumiller et
al. 2003; Tomiya et al. 2003; Chang et al. 2003; Yun et al. 2005;
Hill et al. 2006; Okada et al. 2010; Aumiller et al. 2012; Geisler
and Jarvis 2012; Palmberger et al. 2012; Mabashi-Asazuma et al.
2013). These efforts ultimately yielded new baculovirus-insect
systems that can produce recombinant glycoproteins with human-type,
terminally sialylated N-glycans. This was an important step towards
the broader goal of extending the utility of the baculovirus-insect
cell system to include therapeutic glycoprotein production, which
is not currently considered to be a legitimate application of this
system. In order to finally achieve this goal, however, it also
will be necessary to eliminate core .alpha.1,3-fucosylation of
recombinant glycoproteins in certain insect cell lines, including
some that are commonly used as hosts for baculovirus vectors, as
this modification generates a highly immunogenic carbohydrate
epitope (reviewed by Fotisch and Vieths 2001; Altmann et al.
2007).
[0006] There are two distinct types of N-glycan core fucosylation
involving the addition of either .alpha.1,6- or .alpha.1,3-linked
fucose residues to the core N-acetylglucosamine. Humans encode a
single core fucosyltransferase, FUT8, which can only add
.alpha.1,6-linked fucose residues, but many insects encode two core
fucosyltransferases, FucT6 and FucTA, which can add .alpha.1,6- or
.alpha.1,3-linked fucose residues, respectively, to the core
N-acetylglucosamine (FIG. 1A; Fabini et al. 2001; Paschinger et al.
2005; Rendi et al. 2007). Because humans have no FucTA counterpart,
we cannot produce core .alpha.1,3-fucosylated N-glycoproteins and,
as a result, the core .alpha.1,3-fucosylated sugar epitope is
immunogenic for many people. In fact, the presence of this epitope
on bee venom glycoproteins accounts for the life-threatening
allergic responses, such as anaphylactic shock, induced by bee
stings in some humans (King et al. 1976; Prenner et al. 1992;
Kubelka et al. 1995; reviewed by Altmann et al. 2007). In addition,
pre-existing human antibodies against the immunogenic sugar epitope
can give false positive results in diagnostic tests that use
.alpha.1,3-fucosylated recombinant glycoproteins produced in the
baculovirus-insect cell system (Hancock et al. 2008; Seismann et
al. 2010).
[0007] Among the insect cell lines commonly used as hosts for
baculovirus-mediated recombinant protein production, BTI-Tn-5B1-4
(Wickham et al. 1992; commercialized as High Five.TM. by Life
Technologies Inc., Carlsbad, Calif.), which is derived from
Trichoplusia ni, produces high levels of the core
.alpha.1,3-fucosylated N-glycan epitope, whereas Sf9 (Summers and
Smith 1987), derived from Spodoptera frugiperda, and BmN (Maeda
1989), derived from Bombyx mori, do not (Rudd et al. 2000; Hancock
et al. 2008; Seismann et al. 2010; Blank et al. 2011; Palmberger et
al. 2011). Importantly, the capacity to produce immunogenic, core
.alpha.1,3-fucosylated N-glycans trumps the opportunity to exploit
the potentially higher recombinant glycoprotein production capacity
of insect cell lines derived from Trichoplusia ni, such as High
Five.TM. (Davis et al. 1992; Krammer et al. 2010).
[0008] While core .alpha.1,3-fucosylation is a relatively
host-specific modification, core .alpha.1,6-fucosylation is a
common feature of recombinant glycoproteins produced by all insect
cell lines, including those used as hosts for baculovirus vectors.
As noted above, core .alpha.1,6-fucosylation also occurs in humans
and, therefore, does not produce an immunogenic sugar epitope.
Nevertheless, this form of core fucosylation is also
biotechnologically significant because it inhibits the effector
functions of certain types of therapeutic antibodies (Shields et
al. 2002; Shinkawa et al. 2003; reviewed by Satoh et al. 2006;
Jefferis 2009), which comprise a large and growing share of the
human biologics market (reviewed by Elvin et al. 2013). The
inhibition of antibody effector functions by core fucosylation
stimulated efforts to block pathways responsible for this
modification and enable production of non-fucosylated antibodies in
mammalian cell expression systems (FIG. 1B). Various approaches
included repressing or eliminating FUT8 gene expression
(Yamane-Ohnuki et al. 2004; Imai-Nishiya et al. 2007; Malphettes et
al. 2010), overexpressing upstream processing enzymes to produce
N-glycan structures that are not recognized as acceptor substrates
(Ferrara et al. 2006; Zhong et al. 2012), and blocking production
of GDP-L-fucose, which is required as the donor substrate for
fucosylation by FUT8 (Imai-Nishiya et al. 2007; Kanda et al. 2007;
von Horsten et al. 2010). To date, however, there have been no
reported efforts to block recombinant glycoprotein fucosylation in
any insect-based system, including the baculovirus-insect cell
system, despite the arguably more serious problem of immunogenicity
associated with core .alpha.1,3-fucosylation mediated by some
insect and insect cell types.
SUMMARY OF THE INVENTION
[0009] In accordance with the present invention, a recombinant
baculovirus expression vector for transient expression of
GDP-4-dehydro-6-deoxy-D-mannose reductase (RMD) in an insect cell
is disclosed. In one embodiment, the vector comprises the following
operably linked components, i) an expression control sequence
functional early in infection operably linked to a codon optimized
RMD encoding nucleic acid; and ii) an insertion site suitable for
insertion of one or more nucleic acids encoding at least one
heterologous protein of interest. In a particularly preferred
embodiment, the vector is AcRMD shown in FIG. 14. In another
embodiment, the vector further comprises a nucleic acid sequence
encoding at least one heterologous protein of interest operably
linked to a promoter which is active later in infection, e.g., a
p6.9 or polyhedrin promoter inserted at said insertion site.
[0010] In certain embodiments, the expression control sequence
includes a promoter selected from the group consisting of
baculovirus immediate early and delayed early promoters and an
inducible promoter. In a preferred embodiment, the expression
control sequence also includes an enhancer element.
[0011] The vectors of the invention have utility in the production
of non-fucosylated therapeutic proteins. Such therapeutic proteins
include, without limitation, an antibody, a subunit vaccine, an
antibiotic, a cytokine, an anticoagulant, a viral antigen, an
enzyme, a hormone, or a blood clotting factor. Cells useful in the
methods disclosed herein include, for example, Sf9, Sf21,
expresSF+.RTM., Tn368, High Five.RTM., Tni PRO.RTM., Ea4, Ao38,
BmN, S2, and S2R+ cells.
[0012] Also provided is a method for producing at least one
molecule of interest (e.g., a therapeutic protein) lacking fucose,
comprising providing insect cells and introducing a baculovirus
comprising at least one nucleic acid molecule encoding a codon
optimized enzyme GDP-4-dehydro-6-deoxy-D-mannose reductase (RMD)
operably driven by an immediate early expression control sequence
for expression immediately after infection or an inducible
promoter, and at least one additional nucleic acid encoding a
protein of interest driven by a promoter active later in infection
that may or may not be on the same vector encoding RMD. Using this
approach, inhibition of fucosylation is stabilized permitting
production of a non-fucosylated protein of interest. The infected
cells are incubated under conditions wherein
GDP-4-dehydro-6-deoxy-D-mannose reductase blocks the production of
GDP-L-fucose, and said at least one protein of interest is produced
lacking fucose. Following production, the non-fucosylated protein
of interest is isolated.
[0013] In yet another aspect, a kit for the production of at least
one protein of interest lacking fucose is provided comprising at
least one recombinant baculovirus comprising at least one nucleic
acid molecule encoding the codon optimized enzyme
GDP-4-dehydro-6-deoxy-D-mannose reductase (RMD) operably driven by
an immediate early expression control sequence for expression
immediately after infection, thereby stabilizing inhibition of
fucosylation, and an insertion site for at least one additional
nucleic acid molecule encoding at least one protein of interest,
for production of non-fucosylated proteins of interest. The kit may
also contain insect cells and at least one additional baculoviral
vector comprising a promoter suitable to drive expression of the
protein of interest and an insertion site for the at least one
nucleic acid encoding the protein of interest.
[0014] In a further embodiment, the invention provides a method for
production of a non-fucosylated protein in insect larvae. An
exemplary method entails providing insect larvae and introducing
therein a baculovirus comprising at least one nucleic acid molecule
encoding a codon optimized enzyme GDP-4-dehydro-6-deoxy-D-mannose
reductase (RMD) operably driven by an immediate early expression
control sequence for expression immediately after infection or an
inducible promoter, thereby stabilizing inhibition of fucosylation,
and at least one additional nucleic acid molecule encoding at least
one protein of interest driven by an promoter active later in
infection, thereby producing non-fucosylated proteins wherein said
additional nucleic acid is present on the same baculovirus encoding
RMD or is present on a second baculovirus vector. The infected
larvae are then incubated under conditions wherein
GDP-4-dehydro-6-deoxy-D-mannose reductase blocks the production of
GDP-L-fucose, and said at least one protein of interest is produced
lacking fucose. The method further includes the step of isolating
the protein of interest.
BRIEF DESCRIPTION OF THE DRAWINGS
[0015] FIG. 1. Pathways of N-glycan fucosylation (A) and
GDP-L-fucose biosynthesis (B). In theory, GDP-L-fucose biosynthesis
in eukaryotic cells can be blocked by expression of bacterial RMD,
which converts GDP-4-keto-6-deoxy-D-mannose to GDP-D-rhamnose.
Abbreviations: FUT8, human core .alpha.1,6-fucosyltransferase 8;
FucT6, insect core .alpha.1,6-fucosyltransferase; FucTA, insect
core .alpha.1,3-fucosyltransferase; GMD, GDP-D-mannose
4,6-dehydratase; Fx protein, GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase; GFR, Golgi GDP-L-fucose transporter;
Rmd, GDP-4-dehydro-6-deoxy-D-mannose reductase; FUK, fucokinase;
FPGT, fucose-1-phosphate guanylyltransferase.
[0016] FIG. 2. Core .alpha.1,3-fucosylation of endogenous insect
cell glycoproteins. Total proteins in Sf9, High Five.TM., or Tni
PRO.TM. cell lysates were resolved by SDS-PAGE in 12% acrylamide
gels and stained with Coomassie Brilliant Blue (A) or transferred
to a PVDF membrane and analyzed by western blotting with primary
anti-HRP rabbit IgG and secondary a-rabbit IgG conjugated to
alkaline phosphatase (B).
[0017] FIG. 3. Phylogenetic trees of genes involved in GDP-L-fucose
biosynthesis. Phylogenetic analysis of FUK (A), FPGT (B), GMD (C),
and Fx protein (D) genes was performed using the Maximum Likelihood
method with MEGA5 software (Tamura et al., 2011). The bars indicate
the number of substitutions per site. Abbreviations: Hs, Homo
sapiens; Mm, Mus musculus; Bt, Bos taurus; Gg, Gallus gallus; X1,
Xenopus laevis; Dr, Danio rerio; Dp, Daphnia pulex; Ce,
Caenorhabditis elegans; At, Arabidopsis thaliana.
[0018] FIG. 4. Cell surface fucosylation. Sf9 and polyclonal SfRMD
(A) or High Five.TM. and polyclonal TnRMD (B) cells were seeded
into culture plates, and then stained with AAL, as described in
Materials and methods. The cell surface staining patterns are shown
alongside corresponding phase contrast micrographs, as
indicated.
[0019] FIG. 5. Sf9, SfRMD 2B2, High Five.TM. and TnRMD 6A6 cells
were infected with a baculovirus vector encoding a 6X HIS-tagged Fc
domain of mouse IgG2a (mIgG2a-Fc) under the control of the
baculovirus p6.9 promoter and the mIgG2a-Fc was affinity-purified
from the extracellular fractions, as described in Materials and
methods. Samples were then treated with
peptide-N.sup.4-(N-acetyl-.beta.-glucosaminyl) asparagine amidase
(PNGase)-F or reaction buffer alone, resolved by SDS-PAGE,
transferred to a PVDF membrane, and probed with AAL to detect
fucose or with anti-mouse IgG to detect the protein.
[0020] FIG. 6. Impact of AcP(+)IE1-RMD co-infection on mIgG2a-Fc
fucosylation. Sf9 or Tni PRO.TM. cells were infected with
Acp6.9-mIgG2a-Fc, a recombinant baculovirus encoding mIgG2a-Fc, or
with equal doses of Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD, a
recombinant baculovirus encoding Rmd. The cell-free media were
harvested at 48 hours post-infection and used to affinity purify
each mIgG2a-Fc preparation for lectin blotting analysis with AAL
(specific for fucose) or western blotting analysis with anti-HRP
(specific for core .alpha.1,3 fucose) or anti-mouse IgG with (+) or
without (-) PNGase-F pre-treatment, as indicated.
[0021] FIG. 7. N-glycan profiling of various mIgG2a-Fc preparations
by MALDI-TOF MS. mIgG2a-Fc preparations were produced and purified
from Sf9 and Tni PRO.TM. cells infected with Acp6.9-mIgG2a-Fc alone
or Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD, as described in the legend
to FIG. 6. PNGaseAr was used to remove the N-glycans, which were
then recovered, permethylated, and analyzed by MALDI-TOF MS, as
described in Materials and methods. mIgG2a-Fc from Sf9 cells
infected with Acp6.9-mIgG2a-Fc alone (A), Sf9 cells co-infected
with Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD (B), Tni PRO.TM. cells
infected with Acp6.9-mIgG2a-Fc alone (C), or Tni PRO.TM. cells
co-infected with Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD (D). All
molecular ions were detected as [M+Na].sup.+, assigned, and
annotated using the standard cartoon symbolic representations.
[0022] FIG. 8. Genetic maps of parental baculoviral vector,
baculovirus transfer plasmid, and AcRMD. The new baculovirus vector
designated AcRMD was isolated by replacing the 5' regions of the
AcMNPV chiA and v-cath genes in BacPAK6 (Kitts and Possee 1993)
baculoviral DNA with an expression cassette encoding EGFP and Rmd
under the control of dual, back-to-back ie1 promoters separated by
the AcMNPV hr5 enhancer, as described in Materials and methods.
[0023] FIG. 9. Genetic maps of recombinant baculoviruses encoding
anti-CD20-IgG. The recombinant baculoviruses designated
Ac-.alpha.CD20-IgG and Acp6.9-.alpha.CD20-IgG were isolated by
using homologous recombination to replace the lacZ sequence in the
parental baculovirus, AcGT (Toth et al, 2011), with expression
cassettes encoding the anti-CD20-IgG heavy and light chains under
the control of dual, back-to-back polyhedrin or p6.9 promoters
separated by the second intron of the Drosophila melanogaster white
gene, respectively. Similarly, the recombinant baculoviruses
designated AcRMD-.alpha.CD20-IgG and AcRMDp6.9-.alpha.CD20-IgG were
isolated by using homologous recombination to replace the lacZ
sequence of the parental baculovirus, AcRMD (this study), with the
same expression cassettes used to isolate Ac-.alpha.CD20-IgG and
Acp6.9-.alpha.CD20-IgG.
[0024] FIG. 10. Expression and secretion of anti-CD20-IgG under the
control of late or very late baculoviral promoters. Sf9 cells were
infected with AcMNPV, Ac-CD20-IgG, Acp6.9-.alpha.CD20-IgG,
AcRMD-.alpha.CD20-IgG, or AcRMDp6.9-.alpha.CD20-IgG. At 48 hours
post-infection, the cell-free culture media were collected as the
extracellular fraction, the cells were lysed, and the clarified
supernatants were collected as the intracellular fraction. Proteins
were resolved by SDS-PAGE, transferred to a PVDF membrane, and
probed with anti-human IgG Fc-specific (.alpha.-HC) or anti-human
IgG .kappa. chain-specific antibodies (.alpha.-LC).
[0025] FIG. 11. Analysis of purified anti-CD20-IgG preparations
from Sf9 and Tni PRO.TM.. The anti-CD20-IgG preparations produced
by Sf9 or Tni PRO.TM. cells infected with Acp6.9-.alpha.CD20-IgG or
AcRMDp6.9-.alpha.CD20-IgG were affinity purified using protein A,
as described in Materials and methods, resolved by SDS-PAGE under
reducing (A) or non-reducing (B) conditions, and stained with
Coomassie Brilliant Blue.
[0026] FIG. 12. Fucosylation of an anti-CD20-IgG (rituximab)
produced using baculovirus or AcRMD baculovirus vectors. Sf9 and
Tni PRO.TM. cells were infected with either Acp6.9-.alpha.CD20-IgG
or AcRMDp6.9-.alpha.CD20-IgG, and the cell-free media were
harvested and used to affinity purify anti-CD20-IgG at 48 hours
post-infection. The results of western blotting assays with
anti-human IgG Fc (A, .alpha.-HC) or anti-human IgG .kappa. chain
(B, .alpha.-LC) and lectin blotting assays with AAL (C) with (+) or
without (-) PNGase-F pre-treatment are shown.
[0027] FIG. 13. N-glycan profiling of various anti-CD20-IgG
preparations by MALDI-TOF MS. Anti-CD20-IgG was isolated from Sf9
or Tni PRO.TM. cells infected with Acp6.9-.alpha.CD20-IgG or
AcRMDp6.9-.alpha.CD20-IgG, as described in the legend of FIG. 12.
The N-glycans were removed by PNGaseAr treatment, recovered,
permethylated, and analyzed by MALDI-TOF MS, as described in
Materials and methods. Anti-CD20-IgG from Sf9 cells infected with
Acp6.9-.alpha.CD20-IgG (A), Sf9 cells infected with
AcRMDp6.9-.alpha.CD20-IgG (B), Tni PRO.TM. cells infected with
Acp6.9-.alpha.CD20-IgG (C), or Tni PRO.TM. cells infected with
AcRMDp6.9-.alpha.CD20-IgG (D). All molecular ions were detected as
[M+Na].sup.+, assigned, and annotated using the standard cartoon
symbolic representations.
[0028] FIG. 14. A plasmid map (FIG. 14A) showing the major genetic
elements and text files (FIGS. 14B to 14E) of the hr5 enhancer,
AcMNPV ie1 promoter, codon-optimized RMD encoding sequence and the
optional EGFP encoding sequences in the transfer plasmid
p.DELTA.Chi/Cath-EGFP/RMD, which was used to isolate AcRMD (SEQ ID
NO: 1). In certain embodiments the EGFP encoding sequences are
removed from SEQ ID NO: 1.
[0029] FIG. 15. FIGS. 15A-15D show the pVL1393-polh-antiCD20-IgG
sequence containing the AcMNPV polyhedrin promoter, anti-CD20-IgG
heavy chain coding sequence, and anti-CD20-IgG light chain coding
sequence (SEQ ID NO: 2), which was used to isolate a daughter of
AcRMD encoding anti-CD20 under the control of the polyhedrin
promoter.
[0030] FIG. 16. FIGS. 16A-16D show text files of
pVL1393-p6.9-antiCD20-IgG sequence containing the AcMNPV p6.9
promoter, anti-CD20-IgG heavy chain coding sequence, and
anti-CD20-IgG light chain coding sequence (SEQ ID NO: 3), which was
used to isolate a daughter of AcRMD encoding anti-CD20 under the
control of the p6.9 promoter.
DETAILED DESCRIPTION OF THE INVENTION
[0031] The ability to glycosylate recombinant proteins is an
important attribute of insect-based, including baculovirus-insect
cell expression systems, but some insect cell lines produce
recombinant glycoproteins with core .alpha.1,3-fucosylated
N-glycans, which are highly immunogenic and render products
unsuitable for human use. To address this problem, we exploited a
bacterial enzyme, GDP-4-dehydro-6-deoxy-D-mannose reductase (Rmd),
which consumes the precursor to GDP-L-fucose. We expected this
enzyme to indirectly block glycoprotein fucosylation by blocking
the production of GDP-L-fucose, which is required as the donor
substrate for this process. Initially, we genetically transformed
two different insect cell lines to constitutively express Rmd and
successfully isolated subclones with fucosylation-negative
phenotypes. Surprisingly, however, we found that the
fucosylation-negative phenotypes induced by Rmd expression were
unstable, indicating that the prior art involving host cell
engineering is ineffective in insect systems. Thus, we constructed
a novel baculovirus vector designed to express Rmd immediately
after infection and to facilitate the insertion of genes encoding
any glycoprotein of interest for expression at a later time after
infection. We used this vector to produce a daughter encoding a
therapeutic anti-CD20-IgG (rituximab) and found, in contrast to an
Rmd-negative control, that insect cells infected with this virus
produced a non-fucosylated form of this antibody. These results
indicate that the novel Rmd.sup.+ baculoviral vector we produced
can be used to solve the problem of immunogenic core
.alpha.1,3-fucosylated N-glycan production associated with insect
cell systems, including the baculovirus-insect cell system. These
results extend the utility of such systems, which, when used in
conjunction with existing glycoengineered insect cell lines, now
include therapeutic glycoprotein production, in particular,
production of recombinant antibodies lacking fucose with enhanced
effector functions.
DEFINITIONS
[0032] A "cell line" refers to cells that can be cultured in the
lab for an indefinite period and are useful for producing large
amounts of a protein of interest.
[0033] As used herein, the term "insect" includes an insect in any
stage of development, including first through fifth instar larvae.
For the production of non-fucosylated polypeptides of interest, a
large larva, such as a third, fourth, or fifth instar larva is
preferred. It will be evident to a skilled worker which insect
stage is suitable for a particular purpose, such as for direct
production of a glycosylated polypeptide of interest, for storage
or transport of an insect to a different location, for generation
of progeny, for further genetic crosses, or the like.
[0034] With reference to nucleic acids of the invention, the term
"isolated nucleic acid" is sometimes used. This term, when applied
to DNA, refers to a DNA molecule that is separated from sequences
with which it is immediately contiguous (in the 5' and 3'
direction) in the naturally occurring genome of the organism from
which it originates. For example, the "isolated nucleic acid" may
comprise a DNA or cDNA molecule inserted into a vector, such as a
plasmid or virus vector, or integrated into the DNA of a prokaryote
or eukaryote. Isolated nucleic acids refers to those suitable for
insertion in the recombinant baculoviral vectors described herein,
e.g., RMD encoding nucleic acids and those encoding the desired
protein of interest.
[0035] With respect to protein, the term "isolated protein" or
"isolated and purified protein" is sometimes used herein. This term
refers primarily to a protein produced by expression of an isolated
nucleic acid molecule of the invention. Alternatively, this term
may refer to a protein that has been sufficiently separated from
other proteins with which it would naturally be associated, so as
to exist in "substantially pure" form.
[0036] The term "protein of interest" is sometimes used herein. The
term refers to any protein and includes, without limitation,
therapeutic proteins, antibodies, a subunit vaccine, an antibiotic,
a cytokine, an anticoagulant, a viral antigen, an enzyme, a
hormone, or a blood clotting factor.
[0037] The term "promoter region or expression control sequence"
refers to the transcriptional regulatory regions of a gene, which
may be found at the 5' or 3' side of the coding region, or within
the coding region, or within introns. Such sequences regulate
expression of a polypeptide coded for by a polynucleotide to which
it is functionally ("operably") linked. Expression can be regulated
at the level of the mRNA or polypeptide. Thus, the term expression
control sequence includes mRNA-related elements and protein-related
elements. Such elements include promoters, domains within
promoters, upstream elements, enhancers, elements that confer
tissue or cell specificity, response elements, ribosome binding
sequences, transcriptional terminators, etc.
[0038] Suitable expression control sequences that can function in
insect cells will be evident to the skilled worker. In some
embodiments, the coding sequences described herein may be operably
linked to an expression control sequence from the virus, itself, or
to another suitable expression control sequence. Suitable
baculovirus vectors include those based on Autographa californica
NPV, Orgyia pseudotsugata NPV, Lymantria dispar NPV, Bombyx mori
NPV, Rachoplusia ou NPV, Spodoptera exigua NPV, Heliothis zea NPV,
Galleria mellonella NPV, Anagrapha falcifera nucleopolyhedrovirus
(AfNPV), Trichoplusia ni singlenuclepolyhedrovirus (TnSNPV). As
discussed above, baculovirus-based vectors have been generated (or
can be generated without undue experimentation) that allow the
cloning of large numbers of inserts, at any of a variety of cloning
sites in the viral vector. Thus, more than one heterologous
polypeptide may be introduced together into a transgenic insect
cell or insect of the invention. The viral vector can be introduced
into an insect cell or insect by known methods, such as by in vitro
inoculation (insect cells) or injection or oral ingestion (insect
larvae). Among the many suitable "strong" promoters that can be
used are the baculovirus p10, polyhedrin (polh), p6.9, capsid, and
v-cath promoters. Among the many suitable "weak" promoters are the
baculovirus ie1, ie2, ie0, et1, 39K (aka pp31), and gp64 promoters.
Other suitable constitutive promoters include insect actin hsp70,
.alpha.1-tubulin, and ubiquitin gene promoters; RSV and MMTV
promoters, copia promoter, gypsy promoter, and the cytomegalovirus
IE promoter. If it is desired to increase the amount of gene
expression from a weak promoter, enhancer elements, such as the
baculovirus enhancer elements, hr5 or hr2, among others, may be
used in conjunction with the promoter.
[0039] In some embodiments of the invention, as is discussed in
more detail elsewhere herein, it is desirable that an expression
control sequence is regulatable (e. g., comprises an inducible
promoter and/or enhancer element). Suitable regulatable promoters
include, e.g., hsp70 promoters, the Drosophila metallothionein
promoter, an insect ecdysone-regulated promoter, the Saccharomyces
cerevisiae Gal4/UAS system, and other well-known inducible promoter
systems. A Tet-regulatable molecular switch may be used in
conjunction with any constitutive promoter, such as those described
elsewhere herein (e. g, in conjunction with the CMV-IE promoter, or
baculovirus promoters). Another type of inducible promoter is a
baculovirus delayed early, late or very late promoter that is only
activated following infection by a baculovirus.
[0040] In some embodiments, the expression control sequence
comprises a tissue-or organ-specific promoter. Many such expression
control sequences will be evident to the skilled worker. The term
"vector" refers to a small carrier DNA molecule into which a DNA
sequence can be inserted for introduction into a host cell where it
will be replicated. An "expression vector" is a specialized vector
that contains a gene or nucleic acid sequence with the necessary
regulatory regions needed for expression in a host cell. A
"baculovirus expression vector" is an expression vector consisting
of a recombinant baculovirus that contains a gene or nucleic acid
sequence with the necessary regulatory regions needed for
expression in a host cell.
[0041] The term "operably linked" means that the regulatory
sequences necessary for expression of a coding sequence are placed
in the DNA molecule in the appropriate positions relative to the
coding sequence so as to effect expression of the coding sequence.
This same definition is sometimes applied to the arrangement of
coding sequences and transcription control elements (e.g.
promoters, enhancers, and termination elements) in an expression
vector. This definition is also sometimes applied to the
arrangement of nucleic acid sequences of a first and a second
nucleic acid molecule wherein a hybrid nucleic acid molecule is
generated.
[0042] The phrase "consisting essentially" of when referring to a
particular nucleotide sequence or amino acid sequence means a
sequence having the properties of a given SEQ ID NO:. For example,
when used in reference to an amino acid sequence, the phrase
includes the sequence per se and molecular modifications that would
not affect the basic and novel characteristics of the sequence.
[0043] Methods for designing and preparing constructs suitable for
generating recombinant baculovirus vectors for infection of insect
cells or insects are known to one of ordinary skill in the art. For
these methods, as well as other molecular biology procedures
related to the invention, see, e. g., Sambrook et al. 1989; Wu et
al. 1997; and Ausabel et al. 1994-1999.
[0044] In a preferred embodiment, the baculovirus replicates until
the host insect cell is killed. The insect cell or insect lives
long enough to produce large amounts of the non-fucosylated
polypeptide of interest. In another embodiment, a baculovirus is
used that is attenuated or non-permissive for the host. In this
case, the host is not killed by replication of the baculovirus,
itself (although the host may be damaged by expression of the
heterologous protein of interest).
[0045] The following materials and methods are provided to
facilitate the practice of the present invention.
Plasmid Constructions
[0046] The Pseudomonas aeruginosa Rmd (GenBank: AAG08839.1) coding
sequence was optimized for Spodoptera frugiperda, synthesized by
GeneArt.RTM. (Life Technologies, Gaithersburg, Md.), and cloned
into pMK-T to produce a plasmid designated pKan-RMD.
[0047] pIE1-RMD, a plasmid designed to express Rmd under the
control of the AcMNPV ie1 promoter, was constructed by subcloning
the BamHI-NotI fragment of pKan-RMD into the BamHI and NotI sites
of pIE1TV4 (Jarvis et al. 1996).
[0048] pAcP(+)IE1-RMD, a baculovirus transfer plasmid, was
constructed by subcloning the BamHI-NotI fragment of pIE1-RMD into
the BglII and NotI sites of pAcP(+)IE1TV3 (Jarvis et al. 1996).
[0049] pDIE1-EGFP/RMD.DELTA.Bsu36I, a plasmid designed to express
both EGFP and Rmd under the control of dual, back-to-back AcMNPV
ie1 promoters, was constructed in four sequential steps. First, the
bovine growth hormone (BGH) polyadenylation (poly A) signal was
amplified by polymerase chain reaction (PCR) with pcDNA3.1 (Life
Technologies) as the template and PmeI-BGHpolyA-Fw and
SpeI-BGHpolyA-Rv as the primers. The resulting amplimer was
digested with PmeI and SpeI and cloned into the corresponding sites
of pIE1TV4 to produce a plasmid designated pIE1-BR. Second, the
EGFP coding sequence was amplified by PCR with pIE1-EGFP as the
template and BamHI/KpnI-EGFP-Fw and NruI-EGFPstop-Rv as the
primers. The resulting amplimer was digested with BamHI and NruI
and subcloned into the BamHI and PmeI sites of pIE1-BR to produce a
plasmid designated pIE1-EGFP-BGH. Third, the Bsu36I site of Rmd was
deleted by overlapping PCR mutagenesis. This involved amplifying
the 5'-region of Rmd with NruI-RMD-Fw and RMD-BsuDe1-Rv as the
primers and the 3'-region of Rmd with RMD-BsuDe1-Fw and ApaI-RMD-Rv
as the primers, with pIE1-RMD as the template in both cases. The
resulting 5'- and 3'-region Rmd amplimers were mixed and used as
templates for an overlapping PCR with NruI-RMD-Fw and ApaI-RMD-Rv
as the primers. The resulting RMDBsu36I amplimer was subcloned into
pGEM-T (Promega, Madison, Wis.) to produce
pDIE1-EGFP/RMD.DELTA.Bsu36I. Finally, the EGFP-BGH poly A signal
and RMD.DELTA.Bsu36I coding sequence were assembled by sequentially
subcloning the KpnI-HindIII fragment of pIE1-EGFP-BGH and the
NruI-ApaI fragment of pGEMT-RMD.DELTA.Bsu36I into the corresponding
sites of pDIE1-TOPO.3 (Shi et al. 2007) to produce the plasmid
designated pDIE1-EGFP/RMD.DELTA.Bsu36I.
[0050] To construct a baculovirus transfer vector targeting the
chiA/v-cath locus, we produced three PCR amplimers comprised of
AcMNPV orf124/lef7, chiA, or v-cath/gp64 sequences and
independently subcloned each one into pGEM-T. After verifying their
sequences, these three DNA fragments were assembled by sequentially
subcloning the PmeI-ApaI fragment of chiA and then the ApaI
fragment of v-cath/gp64 into the corresponding sites of
pGEMT-orf124/lef7 to produce a new plasmid designated
pChi/CathTVC6. Finally, we blunt-ended the HindIII-BamHI fragment
of pDIE1-EGFP/RMD.DELTA.Bsu36I with T4 DNA polymerase (New England
Biolabs, Beverly, Mass.) and inserted the resulting DNA fragment
into the T4 DNA polymerase blunt-ended HindIII and EcoRI sites of
pChi/CathTVC6. This transfer plasmid, which was designated
p.DELTA.Chi/Cath-EGFP/RMD.DELTA.Bsu36I, was used to create the new
baculovirus vector in which the viral chiA and v-cath genes were
replaced by genes encoding Rmd and EGFP, each under the control of
the AcMNPV ie1 promoter.
[0051] pVL1393-polh-.alpha.CD20-IgG and
pVL1393-p6.9-.alpha.CD20-IgG, which are baculovirus transfer
plasmids used to isolate baculovirus expression vectors encoding
anti-CD20-IgG, were constructed in four sequential steps. First,
the BGH poly A signal was PCR amplified with pIE 1-BR as the
template and EcoRI-BGHpolyA-Fw and EcoRV-BGHpolyA-Rv as the
primers. The resulting amplimer was digested with EcoRI and EcoRV
and then subcloned into the corresponding sites of pVL1393 (Summers
and Smith 1987) to produce pVL1393-BGH. Second, the NotI-SbfI
fragment of pGEMT-.alpha.CD20HC, which encodes the heavy chain, and
the NotI-EcoRI fragment of pGEMT-.alpha.CD20LC, which encodes the
light chain of anti-CD20-IgG were sequentially subcloned into the
NotI-PstI and NotI-EcoRI sites of pVL1393-BGH to produce
pVL1393-.alpha.CD20-IgG-no promoter. Third, two copies of the
AcMNPV polyhedrin or p6.9 promoter were assembled in back-to-back
orientation, with the second intron of the Drosophila melanogaster
white gene as an intervening spacer, to create plasmids designated
either pGEMT-ppol-wi-ppol or pGEMT-p6.9-wi-p6.9, respectively. The
former was constructed by PCR-amplifying two copies of the
polyhedrin promoter with pAcGT N-term 8xHis pPol (Toth et al. 2011)
as the template and either NheI-ppol-Fw and NotI-ppol-Rv or
XhoI-ppol-Fw and SphI/PmeI-ppol-Rv as the primers. The resulting
amplimers were digested with NheI and NotI or XhoI and SphI,
respectively, and sequentially subcloned into the corresponding
sites of pGEM-WIZ (Bao and Cagan 2006). Similarly,
pGEMT-p6.9-wi-p6.9 was constructed by PCR-amplifying two copies of
the p6.9 promoter with pAcp6.9GT N-term 8xHis pPol (Toth et al.
2011) as the template and either NheI-p6.9-Fw and NotI-p6.9-Rv or
XhoI-p6.9-Fw and SphI/PmeI-p6.9-Rv as the primers. The resulting
amplimers were digested with NheI and NotI or XhoI and SphI,
respectively, and sequentially subcloned into the corresponding
sites of pGEM-WIZ. Finally, each back-to-back promoter cassette was
independently subcloned into the anti-CD20-IgG baculovirus transfer
plasmid described above. pVL1393-polh-.alpha.CD20-IgG was
constructed by subcloning the PmeI-NotI fragment of
pGEMT-ppol-wi-ppol and pVL1393-p6.9-.alpha.CD20-IgG was constructed
by subcloning the PmeI-NotI fragment of pGEMT-p6.9-wi-p6.9 into the
corresponding sites of pVL1393-.alpha.CD20-IgG_no promoter,
respectively.
[0052] Phusion.RTM. Taq DNA polymerase (New England Biolabs) and a
Biometra TProfessional Standard Thermocycler (Gottingen, Germany)
were used for all PCRs and all primer sequences are given in Table
1.
TABLE-US-00001 TABLE 1 Primers used in this study. Primer name
Sequence (5' to 3')* PmeI-BGHpolyA-Fw
Gtttaaacgcctcgactgtgccttctagttg (4) SpeI-BGHpolyA-Rv
Actagttccccagcatgcctgctatt (5) BamHI/KpnI-EGFP-Fw
Aatggatccggtaccaccatggtgagcaagggcg (6) NruI-EGFPstop-Rv
Ggcacttcgcgattacttgtacagctcgtccatgcc (7) NruI-RMD-Fw
Ttatctcgcgaaccatgactcaacgcttgttcg (8) RMD-BsuDel-Rv
Atcacggaatgcctcgggtacgtatg (9) RMD-BsuDel-Fw
Gctggtcaaacatacgtacccgaggc (10) ApaI-RMD-Rv
Tgggcccttactcctctctaacacgagattccca (11) EcoRI-BGHpolyA-Fw
Attgtgaattcgcctcgactgtgccttctagttgc (12) EcoRV-BGHpolyA-Rv
Taattgatatctccccagcatgcctgctattg (13) NheI-ppol-Fw
Gccgcgctagcatcatggagataattaaaatgataaccatctcgcaaataa (14)
NotI-ppol-Rv Aatttgcggccgcagcgcccgatggtgggacg (15) XhoI-ppol-Fw
Gggcctcgagatcatggagataattaaaatgataaccatctcgcaaataa (16)
SphI/PmeI-ppol-Rv Atttgcatgcgtttaaacagcgcccgatggtgggacg (17)
NheI-p6.9-Fw Gccgcgctagcaaattccgttttgcgacgatg (18) NotI-p6.9-Rv
Aatttgcggccgcgtttaaattgtgtaatttatgtagctgtaatttttacc (19)
XhoI-p6.9-Fw Gggcctcgagaaattccgttttgcgacgatg (20) SphI/PmeI-p6.9-Rv
Atttgcatgcgtttaaacgtttaaattgtgtaatttatgtagctgtaatttttacc (21)
orfl24-Fw Atttgtatttaatcaatcgaaccgtgcac (22) RMD-Rv
Gattgggaatctcgtgttagagaggagtaa (23) EGFP-Fw
Atcttcttcaaggacgacggcaac (24) gp64-Rv
Agcaagatggtaagcgctattgttttatatgtgc (25) chi-Fw
Agatgggtatgaaaccatacaacaagtgtg (26) cath-Rv
Cgctaccataatctttgttgaatcgatg (27) *numbers in parentheses are SEQ
ID NOS:
Cells and Viruses
[0053] Sf9 and Tni PRO.TM. (Expression Systems, Woodland, Calif.)
cells were routinely maintained as shake-flask cultures in ESF 921
medium (Expression Systems) at 28.degree. C. High Five.TM. cells
(Life Technologies) were maintained as adherent cultures in TNM-FH
medium containing 10% (v/v) fetal bovine serum (Atlanta Biologics,
Atlanta, Ga.).
[0054] SfRMD is a transgenic Sf9 cell derivative that was produced
for this study using a modification of an established procedure
(Harrison and Jarvis, 2007). Briefly, Sf9 cells were co-transfected
with a mixture of pIE1-Neo (Jarvis et al. 1990) and pIE1-RMD using
a modified calcium phosphate method (Summers and Smith 1987). The
transfected cells were allowed to recover for 1 day, treated with 1
mg of G418 (Life Technologies)/mL of TNM-FH medium containing 10%
(v/v) fetal bovine serum (Atlanta Biologics) for 1 week, and
G418-resistant clones were isolated by limiting dilution, as
described previously (Hollister and Jarvis 2001). After stepwise
amplification into larger cultures, individual clones were assayed
by cell surface staining with a fucose-specific lectin, as
described below. Unstained clones were designated SfRMD,
characterized in more detail, and used for downstream experiments,
as described below.
[0055] TnRMD is a transgenic High Five.TM. cell derivative that was
designed to constitutively express the Rmd gene and produced for
this study as described above for SfRMD. The baculovirus expression
vector designated AcmIgG2a-Fc has been described previously
(Geisler and Jarvis 2012).
[0056] The baculovirus expression vector designated AcP(+)IE1-RMD
was isolated by co-transfecting Sf9 cells with a mixture of
pAcP(+)IE1-RMD and BacPAK6 (Kitts and Possee 1993) baculoviral DNA
after pre-linearizing the latter by digestion with Bsu36I. Viral
progeny were harvested, clones were resolved by plaque assay in the
presence of X-Gal (Sigma-Aldrich; St. Louis, Mo.), and an isolated
clone with a white plaque phenotype was amplified and titered in
Sf9 cells.
[0057] Baculovirus expression vectors designated Ac-.alpha.CD20-IgG
and Acp6.9-.alpha.CD20-IgG were isolated by co-transfecting Sf9
cells with mixtures of either pVL1393-polh-.alpha.CD20-IgG or
pVL1393-p6.9-.alpha.CD20-IgG and AcGT baculoviral DNA (Toth et al.
2011) after pre-linearizing the latter by digestion with Bsu36I.
The transfected cells were cultured for 5 days in growth medium
containing 100 .mu.M ganciclovir (Life Technologies) and then viral
progeny were harvested, clones were resolved by plaque assay, and
an isolated clone with a white plaque phenotype was amplified and
titered in Sf9 cells, as described above.
[0058] The baculovirus expression vector designated AcRMD was
isolated by co-transfecting Sf9 cells with a mixture of
p.DELTA.Chi/Cath-EGFP/RMD.DELTA.Bsu36I and BacPAK6 (Kitts and
Possee 1993) baculoviral DNA (FIG. 14). This recombination strategy
was custom-designed to replace the AcMNPV chiA and v-cath coding
sequences with Rmd and EGFP coding sequences placed under the
control of dual AcMNPV ie1 promoters separated by the AcMNPV hr5
enhancer. Viral progeny were harvested, clones were resolved by
plaque assay, and fluorescent plaques were identified using an
Axiovert 25 microscope equipped with HBO 50 epi-fluorescence unit
(Carl Zeiss, Oberkochen, Germany). Several plaques were picked,
screened by PCR, as described below, and those that included viral
progeny with the Rmd and EGFP genes in the correct genomic location
were used for a second round of plaque purification. The PCR screen
was repeated, promising clones were used for a third round of
plaque purification, and well-isolated clones with fluorescent
plaque phenotypes were picked and amplified in Sf9 cells. A Wizard
genomic DNA purification kit (Promega) was used to extract total
DNA from Sf9 cells infected with each of those viral clones and
used as the templates for final PCR analyses, which were the same
as those performed for the prior screening steps. In each case, we
performed PCRs with two different primer pairs, orf124-Fw and
RMD-Rv or EGFP-Fw and gp64-Rv to determine if the final AcRMD
isolates had the EGFP/RMD.DELTA.Bsu36I expression cassette in the
correct genomic location, that is, in place of the viral chiA and
v-cath genes. In addition, we used a third primer pair, chi-Fw and
cath-Rv, to directly confirm the absence of those viral genes and
show that the final AcRMD isolates were not detectably contaminated
with parental BacPAK6 vector DNA. Three clones were positive with
the first two primer pairs and negative with the third and one
clone was designated AcRMD, further amplified in Sf9 cells, and
used for the remainder of this study.
[0059] Baculovirus expression vectors designated
AcRMD-.alpha.CD20-IgG and AcRMDp6.9-.alpha.CD20-IgG (FIGS. 15 and
16) were isolated by co-transfecting Sf9 cells with a mixture of
pVL1393-polh-.alpha.CD20-IgG or pVL1393-p6.9-.alpha.CD20-IgG and
AcRMD baculoviral DNA pre-linearized by digestion with Bsu36I.
Viral progeny were harvested, clones were resolved by plaque assay,
and an isolated clone with a white plaque phenotype was amplified
and titered in Sf9 cells, as described above.
Cell Surface Lectin Staining
[0060] Sf9, SfRMD, High Five.TM., or TnRMD cells were stained with
a mixture of biotinylated AAL (Vector Labs, Burlingame, Calif.) and
fluorescein-conjugated streptavidin (Vector Labs) in lectin
staining buffer (10 mM Hepes, pH 7.5, 50 mM NaCl, mM CaCal.sub.2, 1
mM MgCl.sub.2, 1 mM MnCl.sub.2) for 10 min at room temperature. The
cells were then washed twice with lectin staining buffer and imaged
using an Olympus FSX 100 fluorescence microscope (Tokyo,
Japan).
Recombinant Protein Expression and Purification
[0061] For small scale recombinant protein expression experiments,
Sf9 cells were seeded at a density of 2.times.10.sup.6 cells/well
into 6-well plates and infected with Ac-.alpha.CD20-IgG,
Acp6.9-.alpha.CD20-IgG, AcRMD-.alpha.CD20-IgG, or
AcRMDp6.9-.alpha.CD20-IgG at a multiplicity of about 2 plaque
forming units/cell. The virus was allowed to adsorb for 1 hour and
then the infected cells were washed once with 1 mL of ESF 921 and
cultured in 1 mL of fresh ESF 921 at 28.degree. C. to 48 hours
post-infection. At that time, the cell-free media were prepared by
low speed centrifugation and used as the extracellular fractions
for downstream analysis. The cell pellets were washed once with
phosphate buffered saline, lysed with 1 mL of extraction buffer (20
mM HEPES, pH 7.4, 0.15 M NaCl, 0.1 mM EDTA, 0.5% Nonidet P-40),
clarified by centrifugation at 13,000 rpm for 10 min, and the
supernatants were used as the intracellular fractions for
downstream analysis.
[0062] For larger scale recombinant protein expression and
purification, Sf9, Tni PRO.TM., or High Five.TM. cells were seeded
into 50 mL shake flask cultures at a density of 2.times.10.sup.6
cells/mL in ESF 921 and then infected with Acp6.9-.alpha.CD20-IgG,
AcRMDp6.9-.alpha.CD20-IgG, AcmIgG2a-Fc, or a mixture of AcmIgG2a-Fc
and AcP(+)IE1-RMD using a multiplicity of about 2 plaque forming
units/cell for each virus. After a 1 hour adsorption period, the
infected cells were gently pelleted, resuspended in 50 mL of fresh
ESF 921 supplemented with antibiotics (1.25 .mu.g/mL amphotericin B
and 25 .mu.g/mL gentamicin), returned to the shake flasks, and
incubated at 28.degree. C. to 48 hours post-infection. Cells and
debris were pelleted by centrifugation at 1,000.times.g for 10 min
at 4.degree. C., the supernatants were harvested, and budded
baculovirus progeny were removed by centrifugation at
70,000.times.g for 30 min at 4.degree. C. One Complete Protease
Inhibitor Cocktail tablet (Roche Diagnostics, Indianapolis, Ind.)
was dissolved in each final supernatant and then each was
transferred into a 12-14,000 molecular weight cut-off membrane
(Spectrum Labs, Rancho-Dominguez, Calif.) and dialyzed against 0.1
M NaCl for 6 hours. Each anti-CD20-IgG or mIgG2a-Fc preparation was
subsequently dialyzed against 0.15 M or 0.5 M NaCl, respectively,
and then each was purified by was affinity-purified Protein A
agarose (GenScript, Piscataway, N.J.) or ProBond nickel (Life
Technologies) affinity chromatography, respectively, according to
the manufacturer's instructions. Eluted fractions containing the
purified proteins were pooled and desalted on PD10 columns (GE
Healthcare) equilibrated with phosphate buffered saline.
SDS-PAGE, Western Blotting, and Lectin Blotting Analyses
[0063] Several different types of samples were isolated from SD,
Tni PRO.TM., and/or High Five.TM. cells and used for SDS-PAGE,
western blotting, and/or lectin blotting analysis. These included
intracellular fractions from uninfected cells, extracellular
fractions from cells infected with various recombinant
baculoviruses, and anti-CD20-IgG or mIgG2a-Fc purified from cells
infected with various recombinant baculoviruses, as described
above. In some cases, the samples were pre-treated with PNGase-F in
reaction buffer (New England Biolabs) or PNGase-F reaction buffer
alone according to the manufacturer's instructions, as described in
the Figure legends. All samples were boiled in Laemmli sample
buffer and then proteins were resolved by SDS-PAGE on 12%
polyacrylamide gels and either stained with Coomassie Brilliant
blue, destained, and imaged or electrophoretically transferred to
Immobilon-P membranes (Millipore). The latter were blocked for 1
hour at room temperature with Tris-buffered saline (150 mM NaCl in
50 mM Tris-HCl, pH 7.5) containing either 5% bovine serum albumin
(w/v; Sigma-Aldrich) and 0.5% (v/v) Tween 20 (Sigma-Aldrich) or 1%
Tween 20 for western or lectin blotting assays, respectively. After
blocking, western blotting assays were completed using alkaline
phosphatase-conjugated goat anti-human IgG .kappa. chain
(Sigma-Aldrich) to detect the anti-CD20-IgG light chain, alkaline
phosphatase-conjugated goat anti-human IgG Fc (Sigma-Aldrich) to
detect the anti-CD20-IgG heavy chain, alkaline
phosphatase-conjugated goat anti-mouse IgG to detect mIgG2a-Fc, or
rabbit anti-HRP IgG (Gentaur, Brussels, Belgium) as the primary and
alkaline phosphatase-conjugated goat anti-rabbit IgG
(Sigma-Aldrich) as the secondary antibody to detect core
.alpha.1,3-liked fucose. The lectin blotting assays were completed
using alkaline phosphatase-conjugated AAL (Vector Laboratories) and
the probes used for all western and lectin blotting assays were
detected using a standard chromogenic assay for alkaline
phosphatase activity (Blake et al. 1984).
Mass Spectrometry
[0064] N-glycans were enzymatically released from various purified
mIgG2a-Fc and anti-CD20-IgG preparations by exhaustive digestion
with PNGaseAr (New England Biolabs). The spent reactions were
applied to pre-conditioned C18 SepPak cartridges (Waters Corp.,
Milford, Mass.) and the flow-through and a 5% (v/v) aqueous acetic
acid wash were pooled, evaporated, and permethylated, as described
previously (Dell et al. 1994). The permethylated N-glycan
derivatives were extracted into chloroform, pooled with several
aqueous washes, re-evaporated, and then resuspended in
acetonitrile, mixed 1:1 with 2,5-dihydroxybenzoic acid matrix (10
mg/mL in 50% aqueous acetonitrile), and samples were spotted onto
the MALDI-TOF target plate. Data acquisition was performed manually
on a Model 4700 Proteomics Analyzer equipped with an Nd:YAG laser
(Applied Biosystems, Framingham, Mass.) and 1,000 shots were
accumulated in the reflectron positive ion mode.
[0065] The following example is provided to illustrate certain
embodiments of the invention. It is not intended to limit the
invention in any way.
EXAMPLE I
A Novel Baculovirus Vector for the Production of Non-Fucosylated
Recombinant Glycoproteins in Insect Cells
[0066] Analysis of Core .alpha.1,3-Fucosylation in Three Insect
Cell Lines
[0067] High Five.TM. cells, derived from Trichoplusia ni, but not
Sf9 cells, derived from Spodoptera frugiperda, produce core
.alpha.1,3-fucosylated glycoproteins (Rudd et al. 2000; Seismann et
al. 2010; Blank et al. 2011; Palmberger et al. 2011). Another
Trichoplusia ni cell line used as a host for baculovirus expression
vectors is Tni PRO.TM. (Kwon et al. 2009; Bourhis et al. 2010;
Bongiovanni et al. 2012; He et al. 2013; Merchant et al. 2013), but
its capacity for core .alpha.1,3-fucosylation has not been
reported. Thus, we analyzed intracellular extracts of uninfected
Tni PRO.TM. cells by western blotting with anti-horseradish
peroxidase (HRP), which detects core .alpha.1,3-linked
fucosylation, using extracts from Sf9 and High Five.TM. cells as
negative and positive controls. Coomassie brilliant blue staining
showed that approximately equal amounts of protein were loaded in
each case (FIG. 2A). The anti-HRP antibody did not detectably react
with the Sf9 lysates, but reacted with several glycoproteins in the
High Five.TM. lysates, as expected (FIG. 2B). In addition, this
antibody reacted with several glycoproteins in the Tni PRO.TM.
lysates (FIG. 2B), indicating that Tni PRO.TM. cells produce the
immunogenic core .alpha.1,3-fucosylated sugar epitope at levels
roughly comparable to High Five.TM. cells. These results show that
it will be necessary to block core .alpha.1,3-fucosylation in both
of these cell lines before we can exploit their potentially higher
capacity for recombinant glycoprotein production (Davis et al.
1992; Krammer et al. 2010).
[0068] Glycoengineering Insect Cells to Block Glycoprotein
Fucosylation
[0069] Our plan to block glycoprotein fucosylation in insect cell
lines focused on blocking the biosynthesis of GDP-L-fucose, which
is the donor substrate required for this process. This was a
particularly attractive approach in our system because insects
appeared to be the only multicellular organisms lacking two
enzymes, FUK and FPGT, required for the GDP-L-fucose salvage
pathway in other organisms (FIG. 1B). We drew this conclusion from
a previous study indicating there are no FUK and FPGT orthologs in
the Drosophila melanogaster genome, which was the only insect
genome sequenced at that time (Rhomberg et al. 2006). However,
because we now have more information from silkworm, honeybee, and
mosquito genome sequencing projects, among others, we also searched
the NCBI database using mammalian FUK and/or FPGT genes as queries.
We identified putative orthologs in some invertebrates, including
arthropods and nematodes, but none in any insects (FIG. 3A-3B). In
contrast, using genes required for de novo GDP-L-fucose synthesis
as queries, we found putative orthologs in a wide variety of
insects, as expected (FIG. 3C-3D). Although we could not exclude
the possibility that insects have an unknown salvage pathway, these
results strengthened the idea that we could effectively block
GDP-L-fucose biosynthesis by blocking the de novo biosynthetic
pathway, alone, in insect cell lines.
[0070] In principle, we might have achieved this goal by
inactivating any of the genes encoding enzymes involved in this
pathway, including GMD, Fx, GFR, or FUT8 (FIG. 1B). However, there
are no reported examples of targeted gene knockouts in any
lepidopteran insect cell line and this approach is technically
complicated by the fact that neither the Spodoptera frugiperda nor
the Trichoplusia ni genomes have been sequenced. On the other hand,
we have reported many examples of foreign gene knock-ins using both
Sf9 (Hollister et al. 1998; Hollister and Jarvis 2001; Hollister et
al. 2002; Aumiller et al. 2003; Aumiller et al. 2012; Geisler and
Jarvis 2012; Mabashi-Asazuma et al. 2013) and High Five.TM.
(Breitbach and Jarvis 2001) cells, as part of our broader effort to
glycoengineer the baculovirus-insect cell system. Thus, we pursued
an analogous glycoengineering strategy that involved transforming
Sf9 and High Five.TM. cells with a constitutively expressible
Pseudomonas aeruginosa Rmd gene. This gene encodes an enzyme that
consumes the immediate precursor to GDP-L-fucose to produce
GDP-D-rhamnose, which we believed would be a dead-end product in
insect cells (FIG. 1B; Rocchetta et al. 1998). Thus, we expected
Rind to block the production of GDP-L-fucose and glycoprotein
fucosylation because GDP-L-fucose is required as the donor
substrate for this process.
[0071] We constructed an expression plasmid encoding Rmd under the
transcriptional control of the Autographa californica multicapsid
nucleopolyhedrovirus (AcMNPV) immediate early 1 (ie1) promoter, as
described in Materials and methods. We then co-transfected SD and
High Five.TM. cells with a mixture of this plasmid and an
antibiotic-resistance marker and selected polyclonal transformed
Sf9 and High Five.TM. cell subpopulations, which were designated
SfRMD and TnRMD, respectively. We assayed both polyclonal
transformed cell populations for cell surface fucosylation by
staining with Aleuria aurantia lectin (AAL), as described in
Materials and methods. The results showed that 100% of the parental
Sf9 and High Five.TM. cells were stained, while only 23% of the
SfRMD and 33% of the TnRMD cells were stained with AAL (FIG. 4).
These results demonstrated that Rmd overexpression significantly
reduced glycoprotein fucosylation in insect cells. We subsequently
isolated single cell clones from the polyclonal transformed SfRMD
and TnRMD populations, identified several that exhibited no
detectable AAL cell surface staining, and amplified one of each,
designated SfRMD 2B2 and TnRMD 6A6. We then infected Sf9, SfRMD
2B2, High Five.TM. and TnRMD 6A6 cells with a baculovirus vector
encoding a 6X HIS-tagged Fc domain of mouse IgG2a (mIgG2a-Fc) under
the control of the baculovirus p6.9 promoter, which is activated
during the late phase of infection (Passarelli and Guarino 2007),
and affinity-purifed the mIgG2a-Fc from the extracellular
fractions, as described in Materials and methods. Samples were then
treated with
peptide-N.sup.4-(N-acetyl-.beta.-glucosaminyl)asparagine amidase
(PNGase)-F or reaction buffer alone, resolved by SDS-PAGE,
transferred to a PVDF membrane, and probed with AAL to detect
fucose or with anti-mouse IgG to detect the protein (FIG. 5).
[0072] The results of this analysis showed that the mIgG2a-Fc
preparations produced by the parental cell lines were AAL-reactive
and either completely (Sf9) or partially (High Five.TM.) sensitive
to PNGase-F, indicating they were core .alpha.1,6-(Sf9) or
.alpha.1,6- and .alpha.1,3-(High Five.TM.) fucosylated,
respectively. In contrast, neither of the mIgG2aFc preparations
from SfRMD 2B2 or TnRMD 6A6 cells was AAL-reactive, indicating that
RMD effectively blocked glycoprotein fucosylation in both cell
types. However, we were surprised to find that both of these
prototype SfRMD and TnRMD clones recovered strong AAL reactivity
after 38 and 35 passages in culture, respectively, indicating that
the fucosylation-negative phenotype is unstable in these cells
(data not shown). We obtained this same result with other SfRMD and
TnRMD clones, which was extremely surprising, because this knock-in
approach had been used previously to isolate a stable, fucosylation
deficient CHO cell derivative (von Horsten et al. 2010) and because
we had previously demonstrated that a transgenic insect cell line
transformed with six different transgenes was stable for at least
300 passages in culture (Aumiller et al. 2012). Although we found
that they still expressed the Rmd gene at the transcriptional
level, we did not expend any further effort to determine how the
SfRMD and TnRMD cells recovered their original
fucosylation-positive phenotypes. Rather, after finding, much to
our surprise, that our insect cell glycoengineering approach was
unsuccessful, we began to develop a new approach for blocking
glycoprotein fucosylation in the baculovirus-insect cell
system.
[0073] Assessing a Vector-Based Glycoengineering Strategy for
Blocking Glycoprotein Fucosylation
[0074] In view of the surprising phenotypic instability of SfRMD
and TnRMD cells, we abandoned our efforts to glycoengineer the host
cell component and focused our attention on the baculoviral vector
component of the baculovirus-insect cell system. The
baculovirus-insect cell system is a transient expression system in
which baculovirus-infected insect cells express the glycoprotein of
interest for a period of about 2 days, beginning about a day after
infection, when the gene encoding the glycoprotein of interest
begins to be expressed during the late or very late phase of
infection. Baculovirus-infected cells are typically harvested by
about 60-72 hours post-infection because the host cells die and
lyse at later times of infection. Given the transient nature of
this expression system, we realized that the phenotypic instability
observed with long-term constitutive expression of Rmd in the host
cells could be overcome by engineering the viral vector to express
this enzyme. However, we also realized we would have to design the
new vector to express Rmd early in infection, in order to reduce
endogenous GDP-L-fucose to low enough levels to block fucosylation
before the glycoprotein of interest began to be expressed during a
later phase of infection.
[0075] To assess our ability to meet these requirements, we
isolated a recombinant baculovirus designated AcP(+)IE1-RMD, which
encodes Rmd under the control of the AcMNPV ie1 promoter and was
expected to express the Rmd gene immediately after baculovirus
infection (Guarino and Summers 1986). We then used this virus to
examine the impact of immediate early Rmd expression on
fucosylation of mIgG2a-Fc. This was accomplished by co-infecting
Sf9 or Tni PRO.TM. cells with equal doses of AcP(+)IE1-RMD and
Acp6.9-mIgG2a-Fc, or with Acp6.9-mIgG2a-Fc alone as a control, and
then affinity-purifying the mIgG2a-Fc from the extracellular
fractions for analysis, as described in Materials and methods.
Samples of the purified mIgG2a-Fc were then treated with PNGase-F
or reaction buffer alone, resolved by SDS-PAGE, transferred to a
PVDF membrane, and probed with AAL to detect fucose, anti-HRP to
detect core .alpha.1,3-linked fucose, or anti-mouse IgG to detect
the protein. The results showed that the control mIgG2a-Fc
preparation produced by Sf9 cells infected with Acp6.9-mIgG2a-Fc
alone were AAL-reactive (FIG. 6, top panel), indicating it was
fucosylated. In addition, PNGase-F pre-treatment eliminated its AAL
reactivity (FIG. 6, top panel), indicating that it was exclusively
core .alpha.1,6-fucosylated, because PNGase-F does not remove core
.alpha.1,3-fucosylated N-glycans (Tretter et al. 1991). This
interpretation was supported by the fact that anti-HRP, which
recognizes the immunogenic sugar epitope produced by core
.alpha.1,3-fucosylation, did not react with this mIgG2a-Fc
preparation (FIG. 6, middle panel). In contrast, the mIgG2a-Fc
preparation from Sf9 cells co-infected with Acp6.9-mIgG2a-Fc and
AcP(+)IE1-RMD was not AAL-reactive (FIG. 6, upper panel),
indicating it was not fucosylated and, therefore, that
baculovirus-mediated Rmd expression blocked core
.alpha.1,6-fucosylation in Sf9 cells. The mIgG2a-Fc Fc from Tni
PRO.TM. cells infected with Acp6.9-mIgG2a-Fc alone reacted not only
with AAL (FIG. 6, top panel), but also with anti-HRP (FIG. 6,
middle panel), whether or not it was pre-treated with PNGase-F,
indicating that it was core .alpha.1,3-fucosylated. This
interpretation was supported by the fact that PNGase-F did not
detectably alter the electrophoretic mobility of this mIgG2a-Fc
preparation (FIG. 6, bottom panel). In contrast, the mIgG2a-Fc from
Tni PRO.TM. cells co-infected with Acp6.9-mIgG2a-Fc and
AcP(+)IE1-RMD had no detectable AAL (FIG. 6, top panel) or anti-HRP
(FIG. 6, middle panel) reactivity and was sensitive to PNGase-F
(FIG. 6, bottom panel). These results indicated that
baculovirus-mediated Rmd expression blocked both core .alpha.1,6-
and core .alpha.1,3-fucosylation in Tni PRO.TM. cells.
[0076] To more directly assess the impact of AcP(+)IE1-RMD
co-infection on core fucosylation of mIgG2a-Fc, we enzymatically
released, permethylated, and analyzed the N-glycans from each
mIgG2a-Fc preparation in FIG. 6 by matrix assisted laser desorption
ionization-time of flight mass spectrometry (MALDI-TOF MS), as
described in Materials and methods. The results indicated that the
major N-glycans isolated from the mIgG2a-Fc produced by Sf9 cells
infected with Acp6.9-mIgG2a-Fc alone were mono-fucosylated (m/z
1345.7 and 1590.8; FIG. 7A). Based on the results shown in FIG. 6,
these are most likely core .alpha.1,6-fucosylated N-glycans. In
contrast, none of the peaks assigned as fucosylated N-glycans were
detected in the mIgG2a-Fc produced by Sf9 cells co-infected with
Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD (FIG. 7B). The major N-glycans
isolated from the mIgG2a-Fc produced by Tni PRO.TM. cells infected
with Acp6.9-mIgG2a-Fc alone included mono-, but predominantly
di-fucosylated structures (FIG. 7C). While their masses cannot
directly reveal the nature of the linkages between the fucose and
core N-acetylglucosamine residues in these N-glycans, it is most
reasonable to conclude that the di-fucosylated N-glycans have both
.alpha.1,6- and .alpha.1,3-linked fucose residues. Again, none of
the peaks assigned as mono- or di-fucosylated N-glycans were
detected in the mIgG2a-Fc produced by Tni PRO.TM. cells co-infected
with Acp6.9-mIgG2a-Fc and AcP(+)IE1-RMD (FIG. 7D). Together, the
AAL blotting, anti-HRP antibody blotting, and MALDI-TOF MS data
clearly demonstrate that baculovirus-mediated expression of Rmd at
an early stage of infection can effectively block core .alpha.1,6-
and .alpha.1,3-fucosylation of recombinant glycoproteins expressed
later in infection in the baculovirus-insect cell system.
A Novel Baculovirus Vector Designed to Produce Non-Fucosylated
Recombinant Glycoproteins
[0077] While co-infection with multiple baculoviruses is an
approach that can be used to co-express two or more different
recombinant proteins in insect cells, balanced co-infections can be
difficult to achieve, infection with multiple baculoviruses can
dramatically reduce recombinant glycoprotein yields, and optimal
co-infection conditions must be established for each experiment
(Sokolenko et al. 2012). We chose to circumvent these issues by
isolating a novel baculovirus vector designed not only to express
Rmd immediately after infection, but also to facilitate downstream
insertion of genes encoding any glycoprotein of interest for
expression at a later time of infection. The experimental design
used to isolate this new baculovirus vector, designated AcRMD,
included using the ie1-Rmd gene to replace portions of the viral
chiA and v-cath genes, which encode a chitinase purported to
interfere with secretory pathway function (Hawtin et al. 1997; Kaba
et al. 2004; Hitchman et al. 2010) and a cathepsin-like protease
that can degrade recombinant proteins of interest (Slack et al.
1995; Kaba et al. 2004; Hitchman et al. 2010), respectively. The
complete details of the strategy used to isolate this new vector
are given in Materials and methods and genetic maps of the parental
viral genome, transfer plasmid, and final baculoviral vector are
shown in FIG. 8 and the plasmid map shown in FIG. 14.
[0078] AcRMD Produces Non-Fucosylated Recombinant Glycoproteins
[0079] To examine the capabilities of the new baculovirus vector
described in the preceding section, we isolated two independent
daughter recombinants encoding rituximab, an anti-CD20-IgG, with
the light and heavy chain genes placed under the independent
transcriptional control of dual back-to-back promoters from either
the AcMNPV p6.9 or polyhedrin genes (see genetic maps in FIG. 9).
We chose rituximab as the model glycoprotein for this work because
it is a biotechnologically relevant therapeutic antibody that is
core .alpha.1,6-fucosylated in mammalian cells, has enhanced
effector function in the absence of fucosylation, and has been used
to treat rheumatoid arthritis and non-Hodgkin's lymphoma in human
patients (Li et al. 2013; reviewed by Lim et al. 2010). We isolated
AcRMD daughters encoding anti-CD20-IgG under the control of either
the p6.9 or the polyhedrin promoters because the latter is
activated during the very late phase of infection and is widely
used to drive recombinant gene expression in baculoviral vectors,
whereas the former is activated somewhat earlier, during the late
phase of infection, and can sometimes provide higher efficiencies
of protein secretion (Sridhar et al. 1993; Rankl et al. 1994; Bozon
et al. 1995; Kost et al. 1997; Toth et al. 2011). We then infected
Sf9 cells with these viruses, designated Ac-.alpha.CD20-IgG,
Acp6.9-.alpha.CD20-IgG, AcRMD-.alpha.CD20-IgG, or
AcRMDp6.9-.alpha.CD20-IgG, and measured the relative amounts of
anti-CD20-IgG produced and secreted by viruses encoding the heavy
and light chains under the control of the two different promoters.
The results showed that all four baculovirus vectors induced
production and secretion of the anti-CD20-IgG heavy and light
chains (FIG. 10). The results also showed that cells infected with
the baculovirus vectors encoding anti-CD20-IgG under the control of
the late p6.9 promoters secreted higher levels of heavy and light
chains than those infected with the baculovirus encoding this
product under the control of the very late polyhedrin promoters.
Together with the lower levels of heavy and light chains observed
in the intracellular fraction, these results indicated that the
p6.9-based vectors provided higher efficiencies of anti-CD20-IgG
secretion than the polyhedrin-based vectors (FIG. 10). Based on
these results, we used Acp6.9-.alpha.CD20-IgG and
AcRMDp6.9-.alpha.CD20-IgG for the remainder of the experiments
described in this study.
[0080] Acp6.9-.alpha.CD20-IgG or AcRMDp6.9-.alpha.CD20-IgG were
used to infect Sf9 or Tni PRO.TM. cells and the anti-CD20-IgG
secreted by all four virus-cell combinations was affinity purified,
resolved by SDS-PAGE under reducing or non-reducing conditions with
commercial human IgG as a control, and then stained with Coomassie
Brilliant Blue. The results showed that each anti-CD20-IgG
preparation analyzed under reducing conditions contained
approximately equal proportions of the heavy and light chains,
indicating that each virus-cell combination produced and secreted
properly assembled forms of anti-CD20-IgG (FIG. 11). This was
confirmed by SDS-PAGE analysis under non-reducing conditions, which
revealed that each anti-CD20-IgG preparation migrated with relative
electrophoretic mobilities that were consistent with their
calculated molecular weights (.about.165 kDa) and comparable to the
human IgG control (FIG. 11). Further analysis showed that the
anti-CD20-IgG heavy chain produced by
Acp6.9-.alpha.CD20-IgG-infected Sf9 cells was PNGase-F-sensitive
and AAL-reactive, indicating that it had core
.alpha.1,6-fucosylated N-glycans (FIG. 12). In contrast, the
anti-CD20-IgG heavy chain produced by
AcRMDp6.9-.alpha.CD20-IgG-infected Sf9 cells was
PNGase-F-sensitive, but not AAL-reactive, indicating that it had
non-fucosylated N-glycans (FIG. 12). The anti-CD20-IgG heavy chain
produced by Acp6.9-.alpha.CD20-IgG-infected Tni PRO.TM. cells was
PNGase-F-resistant and AAL-reactive, presumably because its
N-glycans were .alpha.1,3-fucosylated in these cells (FIG. 12). In
contrast, the anti-CD20-IgG heavy chain produced by
AcRMDp6.9-.alpha.CD20-IgG-infected Tni PRO.TM. cells was
PNGase-F-sensitive and did not react with AAL (FIG. 12). Together,
these results strongly suggested that early expression of Rmd by
the vectors derived from the AcRMD parent blocked core fucosylation
of anti-CD20-IgG in the baculovirus-insect cell system.
[0081] To confirm and extend these results using a more direct
approach, we enzymatically released, permethylated, and used
MALDI-TOF MS to analyze the N-glycans from anti-CD20-IgG
preparations purified from various virus-cell combinations, as
described in Materials and methods. The N-glycan profiles observed
with the anti-CD20-IgG from Acp6.9-.alpha.CD20-IgG-infected Sf9
cells included four peaks assigned as mono-fucosylated N-glycans
(m/z 1345.7, 1590.8, 1794.9, and 1999.0; FIG. 13A), which are
presumably core .alpha.1,6-fucosylated, based on the
PNGase-F-sensitivity of the heavy chain (FIG. 12). In contrast,
none of these mono-fucosylated peaks were detected among the
N-glycans isolated from the anti-CD20-IgG produced by
AcRMDp6.9-.alpha.CD20-IgG-infected Sf9 cells (FIG. 13B). In
addition, the loss of the fucosylated N-glycan peaks was
accompanied by increased N-glycan peaks corresponding to their
non-fucosylated counterparts, especially those with m/z values of
1171.6 and 1416.7 (FIGS. 13A and 13B). The N-glycan profiles
observed with the anti-CD20-IgG from
Acp6.9-.alpha.CD20-IgG-infected Tni PRO.TM. cells included seven
peaks assigned as fucosylated N-glycans, three of which were
mono-fucosylated (m/z 1345.7, 1590.8, and 1835.9) and four of which
were di-fucosylated (m/z 1315.7, 1519.8, 1764.9, and 2173.1; FIG.
13C). The di-fucosylated N-glycans represented .about.65.5% of
total (FIG. 13C), reflecting the high levels of core
.alpha.1,3-fucosylation observed in Tni PRO.TM. and High Five.TM.
cells (FIG. 2). In contrast, no fucosylated N-glycans were detected
in the profiles obtained with the anti-CD20-IgG produced by
AcRMDp6.9-.alpha.CD20-IgG-infected Tni PRO.TM. cells (FIG. 13D)
and, again, the loss of fucosylated N-glycan peaks was accompanied
by increases in the N-glycan peaks corresponding to their
non-fucosylated counterparts (FIGS. 13C and 13D; m/z 1171.6 and
1416.7). It is tempting to speculate that the large increase in the
m/z 1416.7 peak, which represents an N-glycan with a single
N-acetylglucosamine residue on its non-reducing end, reflects the
relative inability of Sf-FDL (Geisler et al., 2008) to remove this
sugar from non-fucosylated substrates. Regardless, the mass
spectrometric analysis of the N-glycans isolated from anti-CD20-IgG
produced by the Rmd-negative or Rmd-positive baculovirus vectors
clearly demonstrated that the new vector designed to express Rmd
early in infection can block recombinant glycoprotein fucosylation
in the baculovirus-insect cell system.
DISCUSSION
[0082] Core .alpha.1,3-fucosylation generates an immunogenic sugar
epitope that has significantly hindered development and utilization
of insect-based systems, including the baculovirus-insect cell
system for the production of recombinant glycoproteins for
therapeutic drug and diagnostic applications in human medicine. In
addition, core .alpha.1,6-fucosylation of certain types of
recombinant antibodies in this system and others represses their
effector functions. Thus, the basic purpose of this study was to
develop new tools that could be used to produce non-fucosylated
recombinant glycoproteins, including antibodies, in insect-based
systems, including the baculovirus-insect cell system.
[0083] It is well established that High Five.TM., which is a widely
used insect cell line derived from Trichoplusia ni, produces high
levels of immunogenic core .alpha.1,3-fucosylated N-glycans. In the
first part of this study, we showed that Tni PRO.TM. cells, also
derived from Trichoplusia ni, produce high levels of immunogenic
core .alpha.1,3-fucosylated N-glycans, as well. This finding is
relevant because High Five.TM. and Tni PRO.TM. cells can
potentially produce recombinant glycoproteins at higher levels than
other insect cell lines (Davis et al. 1992; Krammer et al. 2010).
Tni PRO.TM. cells have the additional advantage of being easier to
culture in suspension and, unlike High Five.TM. cells (Dee et al.
1997; Taticek et al. 1997; Savary et al. 1999), are directly
transferrable without adaptation from serum containing to
serum-free ESF 921 medium (unpublished observations). In the course
of this study, we found that a mouse IgG2a-Fc domain and a
therapeutic anti-CD20-IgG were both core .alpha.1,6-fucosylated
when produced in Sf9 cells and core .alpha.1,6- and core
.alpha.1,3-fucosylated when produced in High Five.TM. or Tni
PRO.TM. cells. While these results were not surprising in view of
previous literature, they were important because they clearly
justified an effort to block recombinant glycoprotein fucosylation
in the baculovirus-insect cell system.
[0084] To accomplish this goal, we focused on a bacterial enzyme,
Rmd, which consumes the direct precursor to GDP-L-fucose and was
expected to block recombinant glycoprotein fucosylation in insect
cell lines. In fact, previous work had shown that core
.alpha.1,6-fucosylation could be blocked in CHO cells genetically
transformed to overexpress this enzyme (von Horsten et al. 2010).
Thus, our analogous initial approach was to transform Sf9 and High
Five.TM. cells to constitutively express Rmd under the control of
the AcMNPV ie1 promoter. We successfully isolated Sf9 and High
Five.TM. cell subclones that initially had fucosylation-negative
phenotypes and were able to produce a non-fucosylated recombinant
glycoprotein. However, this phenotype was unstable, as both insect
cell lines reverted to fucosylation-positive phenotypes after a
relatively small number of passages in culture. This completely
surprising result revealed that the cell engineering approach
previously used to block core .alpha.1,6-fucosylation in CHO cells
cannot be successfully applied to block core .alpha.1,6- and/or
.alpha.1,3-fucosylation in insect cell systems. Thus, we sought to
develop a new approach that involved glycoengineering the
baculovirus vector, rather than the host.
[0085] We assessed the efficacy of our proposed vector engineering
approach by co-infecting Sf9 and Tni PRO.TM. cells with separate
baculovirus vectors encoding Rmd under the control of the ie1
promoter or mIgG2a-Fc under the control of the polyhedrin promoter.
Analysis of the resulting N-glycosylation patterns showed that
early expression of Rmd could block core fucosylation of mIgG2a-Fc
produced at a later time of infection. This encouraged us to create
a novel baculovirus vector designed not only to express Rmd
immediately after infection, but also to enable quick and efficient
isolation of daughter vectors capable of expressing any recombinant
glycoprotein of interest at later times after infection. After
isolating and characterizing AcRMD, the parent baculovirus vector,
we used it to isolate a daughter encoding the heavy and light
chains of rituximab, an anti-CD20-IgG, under the control of dual,
back-to-back p6.9 promoters. We chose the late p6.9, rather than
the very late polyhedrin promoter to drive expression of this
biotechnologically relevant recombinant glycoprotein because we
found that it provided a higher efficiency of IgG secretion.
Finally, we showed that this novel baculovirus vector could be used
to produce recombinant anti-CD20-IgG with no detectable core
.alpha.1,6- or .alpha.1,3-fucosylation. This conclusion was based
on results obtained from several different methods of N-glycan
analysis, including endoglycosidase treatments, lectin blotting
assays, and MALDI-TOF MS profiling. It is important to note that
our MALDI-TOF MS profiling results indicating there were no
detectable fucosylated N-glycans on the recombinant anti-CD20-IgG
produced by the Rmd-positive baculovirus vector were obtained using
N-glycans isolated with a highly active form of PNGase-A (PNGaseAr;
New England Biolabs), which effectively removes core
.alpha.1,3-fucosylated structures, and with glycan detection levels
in the picomolar range. It is also important to note that our
MALDI-TOF MS results revealed no detectable N-glycans containing
any deoxyhexose, indicating that GDP-rhamnose is a dead-end product
that cannot be utilized for N-glycan modification in the
baculovirus-insect cell system.
[0086] There are clear advantages to engineering the baculovirus
vector, rather than host cell lines to block recombinant
glycoprotein fucosylation in baculovirus-insect cell systems. One
is that any investigator familiar with these systems can use the
new AcRMD vector in conjunction with an established linearized
viral DNA (Kitts and Possee 1993) approach for homologous
recombination with familiar, even pre-existing baculovirus transfer
plasmids to efficiently isolate daughter baculovirus vectors
encoding their favorite recombinant glycoprotein. Another is that
the resulting daughter vectors can be used to produce
non-fucosylated forms of that product in standard, familiar,
commercially available insect cell lines, such as Sf9, Sf21, High
Five.TM., Tni PRO.TM., Ea4, S2, or S2R+, even if the investigators
favorite cell line normally produces high levels of
.alpha.1,3-fucosylated N-glycans. This eliminates the need to
maintain specialized cell lines transformed to block recombinant
glycoprotein fucosylation, which might require different growth
media and/or conditions and have different growth properties, all
of which complicate routine cell culture operations. Overall, it is
highly advantageous to be able to produce non-fucosylated
recombinant glycoproteins by simply replacing the recombinant
baculovirus used for standardized production runs with its AcRMD
counterpart, without having to alter or re-optimize existing
protocols. Most importantly, engineering the virus eliminates the
problem of genetic instability associated with engineering the
insect cell lines, because low passage virus stocks can be
produced, checked, and stored in a biologically inert state. In
contrast, cell lines transformed to constitutively express Rmd must
be maintained in culture and, therefore, subjected to constant
selective pressure, which can drive loss of the
fucosylation-negative phenotype, as observed in this study.
Mammalian cell expression systems engineered to produce
non-fucosylated recombinant glycoproteins, such as FG1, CHO SM 3G1,
CHO FUT8.sup.-/-, RMD-CHO, and CHO-DUKX (Imai-Nishiya et al. 2007;
Kanda et al. 2007; Malphettes et al. 2010; von Horsten et al. 2010;
Zhong et al. 2012), are also subject to the potential problem of
long-term instability. In addition, mammalian cells have a salvage
pathway that can produce GDP-L-fucose using exogenous fucose, which
is a common contaminant of many cell culture components. This
salvage pathway can rescue recombinant glycoprotein fucosylation in
all mammalian cell lines engineered to eliminate this modification
except the FUT8 knockout line. This is unlikely to be a problem in
the baculovirus-insect cell system because insects do not appear to
encode the enzymes involved in the salvage pathways for
GDP-L-fucose biosynthesis.
[0087] Arguably, the most important feature of the novel
baculovirus vector described in this study is its ability to
eliminate the immunogenic sugar epitope resulting from core
.alpha.1,3-fucosylation of recombinant glycoproteins. This will
enable investigators to exploit the potentially higher productivity
of insect cell lines derived from Trichoplusia ni for recombinant
glycoprotein manufacturing (Davis et al. 1992; Krammer et al.
2010). It will also expand the utility of the baculovirus-insect
cell system to include production of recombinant glycoproteins for
human clinical applications, including therapeutics and
diagnostics. Historically, the production of recombinant
glycoproteins for therapeutic use in humans has not been a
legitimate application of the baculovirus-insect cell system. This
study shifts this paradigm because the new baculovirus vector
described herein can block core .alpha.1,3-fucosylation in insect
cell lines glycoengineered to produce humanized, terminally
sialylated N-glycans. The combination of these emerging tools
constitutes a novel baculovirus-insect cell platform that can be
used to manufacture safe and efficacious glycoproteins for human
therapy.
[0088] Another important feature of the novel baculovirus vector
described in this study is its ability to block core
.alpha.1,6-fucosylation, which is a common modification of a
conserved N-glycan on the Fc domain that represses the effector
functions of certain types of therapeutic antibodies. As noted
above, core .alpha.1,6-fucosylation has been blocked in other
expression systems in efforts to produce therapeutic antibodies
with enhanced effector functions and, therefore, higher efficacy at
lower doses (reviewed by Yamane-Ohnuki and Satoh 2009). Sf9 and Tni
PRO.TM. cells infected with the AcRMD daughter vector encoding
anti-CD20-IgG produced a non-fucosylated form of this antibody,
which is expected to have enhanced effector function, based on a
significant body of previous literature (Shields et al. 2002;
Shinkawa et al. 2003; Li et al. 2013; reviewed by Lim et al. 2010;
Owen and Stewart 2012). Moreover, while many recombinant antibodies
have been produced in the baculovirus-insect cell system (reviewed
by Cerutti and Golay 2012), most were expressed using dual,
back-to-back, very late polyhedrin and p10 promoters to express the
heavy and light chains and the heavy chain product. In this study,
we found that expression of the heavy and light chains under the
control of dual, back-to-back, late p6.9 promoters separated by the
second intron from the Drosophila white gene provided a higher
secretion efficiency than the analogous arrangement of very late
polyhedrin promoters (FIG. 10). This result is consistent with
those obtained in similar studies on the relationship between the
timing of promoter activation and the efficiency of recombinant
glycoprotein processing (Sridhar et al. 1993; Rankl et al. 1994;
Bozon et al. 1995; Kost et al. 1997; Toth et al. 2011).
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[0194] While certain of the preferred embodiments of the present
invention have been described and specifically exemplified above,
it is not intended that the invention be limited to such
embodiments. Various modifications may be made thereto without
departing from the scope of the present invention, as set forth in
the following claims.
Sequence CWU 1
1
27111844DNAArtificial SequencepChi/Cath-EGFP/RMD 1ttacacgtag
aattctactc gtaaagcagt ttatgagccc gtgtgcaaaa catgacatca 60tctcgatttg
aaaaacaaat gaccatcatc cactcgatcg tgcgttacaa gtagaattct
120actcgtaaag ccagttcggt tatgagccgt gtgcaaaaca tgacatcagc
ttatgactca 180tacttgattg tgttttacgc gaagggcgaa ttccagcaca
ctggcggccg ttactagacg 240atgtctttgt gatgcgcgcg acatttttgt
aggttattga taaaatgaac ggatacgttg 300cccgacatta tcattaaatc
cttggcgtag aatttgtcgg gtccattgtc cgtgtgcgct 360agcatgcccg
taacggacct cgtacttttg gcttcaaagg ttttgcgcac agacaaaatg
420tgccacactt gcagctctgc atgtgtgcgc gttaccacaa atcccaacgg
cgcagtgtac 480ttgttgtatg caaataaatc tcgataaagg cgcggcgcgc
gaatgcagct gatcacgtac 540gctcctcgtg ttccgttcaa ggacggtgtt
atcgacctca gattaatgtt tatcggccga 600ctgttttcgt atccgctcac
caaacgcgtt tttgcattaa cattgtatgt cggcggatgt 660tctatatcta
atttgaataa ataaacgata accgcgttgg ttttagaggg cataataaaa
720gaaatattgt tatcgtgttc gccattaggg cagtataaat tgacgttcat
gttggatatt 780gtttcagttg caagttgaca ctggcggcga caagatcgtg
aacaaccaag tgaccggtac 840caccatggtg agcaagggcg aggagctgtt
caccggggtg gtgcccatcc tggtcgagct 900ggacggcgac gtaaacggcc
acaagttcag cgtgtccggc gagggcgagg gcgatgccac 960ctacggcaag
ctgaccctga agttcatctg caccaccggc aagctgcccg tgccctggcc
1020caccctcgtg accaccctga cctacggcgt gcagtgcttc agccgctacc
ccgaccacat 1080gaagcagcac gacttcttca agtccgccat gcccgaaggc
tacgtccagg agcgcaccat 1140cttcttcaag gacgacggca actacaagac
ccgcgccgag gtgaagttcg agggcgacac 1200cctggtgaac cgcatcgagc
tgaagggcat cgacttcaag gaggacggca acatcctggg 1260gcacaagctg
gagtacaact acaacagcca caacgtctat atcatggccg acaagcagaa
1320gaacggcatc aaggtgaact tcaagatccg ccacaacatc gaggacggca
gcgtgcagct 1380cgccgaccac taccagcaga acacccccat cggcgacggc
cccgtgctgc tgcccgacaa 1440ccactacctg agcacccagt ccgccctgag
caaagacccc aacgagaagc gcgatcacat 1500ggtcctgctg gagttcgtga
ccgccgccgg gatcactctc ggcatggacg agctgtacaa 1560gtaatcgaaa
cgcctcgact gtgccttcta gttgccagcc atctgttgtt tgcccctccc
1620ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa
taaaatgagg 1680aaattgcatc gcattgtctg agtaggtgtc attctattct
ggggggtggg gtggggcagg 1740acagcaaggg ggaggattgg gaagacaata
gcaggcatgc tggggaacta gtgtggcggc 1800gctaaacaag aaatagcccc
ggtggccaag agtatgcccg ttcctcctac ttttaagcta 1860attcgactgg
cgtcgtctca acaaagtcac tagcgtaaaa aatcagggca tgtgtggcgc
1920ctgctgggcg tttgccactc tggctagttt ggaaagtcaa tttgcaatca
aacataacca 1980gttgattaat ctgtcggagc agcaaatgat cgattgtgat
tttgtcgacg ctggctgtaa 2040cggcggcttg ttgcacacag cgttcgaagc
catcattaaa atgggcggcg tacagctgga 2100aagcgactat ccatacgaag
cagacaataa caattgccgt atgaactcca ataagtttct 2160agttcaagta
aaagattgtt atagatacat taccgtgtac gaggaaaaac ttaaagattt
2220gttacgcctt gtcggcccta ttcctatggc catagacgct gccgacattg
ttaactataa 2280acagggtatt ataaaatatt gtttcaacag cggtctaaac
catgcggttc ttttagtggg 2340ttatggtgtt gaaaacaaca ttccatattg
gacctttaaa aacacttggg gcacggattg 2400gggagaggac ggatttttca
gggtacaaca aaacataaac gcctgtggta tgagaaacga 2460acttgcgtct
actgcagtca tttattaatc tcaacacact cgctatttgg aacataatca
2520tatcgtctca gtagctcaag gtagagcgta gcgctctgga tcgtatagat
cttgctaagg 2580ttgtgagttc aagtctcgcc tgagatatta aaaaactttg
taattttaaa aattttattt 2640tataatatac aattaaaaac tatacaattt
tttattatta cattaataat gatacaattt 2700ttattattac atttaatatt
gtctattacg gtttctaatc atacagtaca aaaataaaat 2760cacaattaat
ataattacaa agttaactac atgaccaaac atgaacgaag tcaatttagc
2820ggccaattcg ccttcagcca tggaagtgat atcgctcaga ctggtgccga
cgccgccaaa 2880cttggtgttc tccatggtgg ttatgaggtt gcttttttgt
tgggcaataa acgaccagcc 2940gctggcatct ttccaactgt cgtgataggt
cgtgttgccg atggtcggga tccaaaactc 3000gacgtcgtcg tcaattgcta
gttccttgta gttgctaaaa tctatgcatt gcgacgagtc 3060cgtgttggcc
acccaacgcc cttctttgta gatgctgttg ttgtagcaat tactggtgtg
3120tgccggcgga ttggtgcacg gcatcagcaa aaacgtgtcg tccgacaaaa
atgttgaaga 3180aacagagttg ttcatgagat tgccaatcaa acgctcgtcc
accttggcca cggagactat 3240caggtcgtgc agcatattgt ttagcttgtt
gatgtgcgca tgcatcagct caatgttcat 3300tttcagcaaa tcgttttcgt
acatcagctc ctcttgaata tgcatcaggt cgcctttggt 3360ggcagtgtct
ccctctgtgt acttggctct aacgttgtgg cgccaagtgg gcggccgctt
3420cttgactcgg tgctcgactt tgcgtttaat gcatctgtta aacttgcagt
tccacgtgtt 3480tttagaaaga tcatatatat cattgtcaat caaacagtgt
tcgcgtgtca ccgactcggg 3540gttatttttg tcatctttaa tgagcagaca
cgcagctttt atttggcgcg tggtgaacgt 3600agacttttgt ttgagaatca
tactcacgcc gtctcgatga agcacagtgt ccacggtcac 3660gttgatgggg
ttgccctcag cgtccaaaat gtatacctgg cactcgtccg tgtcgtcctg
3720gcactcgagc ctgctgtaca ttttcgaagt ggaaatgccg catcgccacg
atttgttgca 3780cgtgtggtgc gcaaagtgat tgttattctg ccgcttcacc
aactctttgc ctttgaccca 3840ctggccgcgg ccctcgttgt cgcgaaaaca
gtcgtcgctg tcactgcccc aacggtcgat 3900cagctcttcg cccacctcgc
actgctgcct gatgctccac ataagcaaat cctctttgcc 3960cacattcagc
gttttcatgg tttcttcgac gcgtgtgttg ggatccagcg agccgccgtt
4020gtacgcatac gcctggtagt accccttgta gccgataatc acgttttcgt
tgtagtccgt 4080ctccacgatg gtgatttcca cgtccttttg cagcgtttcc
ttgggcgggg taatgtccaa 4140gtttttaatc ttgtacggac ccgtcttcat
ttgcgcgttg cagtgctccg ccgcaaaggc 4200agaatgcgcc gccgccgcca
aaagcacata taaaacaata gcgcttacca tcttgctaat 4260cccgcggcca
tggcggccgg gagcatgcga cgtcgggccc aattcgccct atagtgagtc
4320gtattacaat tcactggccg tcgttttaca acgtcgtgac tgggaaaacc
ctggcgttac 4380ccaacttaat cgccttgcag cacatccccc tttcgccagc
tggcgtaata gcgaagaggc 4440ccgcaccgat cgcccttccc aacagttgcg
cagcctgaat ggcgaatgga cgcgccctgt 4500agcggcgcat taagcgcggc
gggtgtggtg gttacgcgca gcgtgaccgc tacacttgcc 4560agcgccctag
cgcccgctcc tttcgctttc ttcccttcct ttctcgccac gttcgccggc
4620tttccccgtc aagctctaaa tcgggggctc cctttagggt tccgatttag
tgctttacgg 4680cacctcgacc ccaaaaaact tgattagggt gatggttcac
gtagtgggcc atcgccctga 4740tagacggttt ttcgcccttt gacgttggag
tccacgttct ttaatagtgg actcttgttc 4800caaactggaa caacactcaa
ccctatctcg gtctattctt ttgatttata agggattttg 4860ccgatttcgg
cctattggtt aaaaaatgag ctgatttaac aaaaatttaa cgcgaatttt
4920aacaaaatat taacgcttac aatttcctga tgcggtattt tctccttacg
catctgtgcg 4980gtatttcaca ccgcatcagg tggcactttt cggggaaatg
tgcgcggaac ccctatttgt 5040ttatttttct aaatacattc aaatatgtat
ccgctcatga gacaataacc ctgataaatg 5100cttcaataat attgaaaaag
gaagagtatg agtattcaac atttccgtgt cgcccttatt 5160cccttttttg
cggcattttg ccttcctgtt tttgctcacc cagaaacgct ggtgaaagta
5220aaagatgctg aagatcagtt gggtgcacga gtgggttaca tcgaactgga
tctcaacagc 5280ggtaagatcc ttgagagttt tcgccccgaa gaacgttttc
caatgatgag cacttttaaa 5340gttctgctat gtggcgcggt attatcccgt
attgacgccg ggcaagagca actcggtcgc 5400cgcatacact attctcagaa
tgacttggtt gagtactcac cagtcacaga aaagcatctt 5460acggatggca
tgacagtaag agaattatgc agtgctgcca taaccatgag tgataacact
5520gcggccaact tacttctgac aacgatcgga ggaccgaagg agctaaccgc
ttttttgcac 5580aacatggggg atcatgtaac tcgccttgat cgttgggaac
cggagctgaa tgaagccata 5640ccaaacgacg agcgtgacac cacgatgcct
gtagcaatgg caacaacgtt gcgcaaacta 5700ttaactggcg aactacttac
tctagcttcc cggcaacaat taatagactg gatggaggcg 5760gataaagttg
caggaccact tctgcgctcg gcccttccgg ctggctggtt tattgctgat
5820aaatctggag ccggtgagcg tgggtctcgc ggtatcattg cagcactggg
gccagatggt 5880aagccctccc gtatcgtagt tatctacacg acggggagtc
aggcaactat ggatgaacga 5940aatagacaga tcgctgagat aggtgcctca
ctgattaagc attggtaact gtcagaccaa 6000gtttactcat atatacttta
gattgattta aaacttcatt tttaatttaa aaggatctag 6060gtgaagatcc
tttttgataa tctcatgacc aaaatccctt aacgtgagtt ttcgttccac
6120tgagcgtcag accccgtaga aaagatcaaa ggatcttctt gagatccttt
ttttctgcgc 6180gtaatctgct gcttgcaaac aaaaaaacca ccgctaccag
cggtggtttg tttgccggat 6240caagagctac caactctttt tccgaaggta
actggcttca gcagagcgca gataccaaat 6300actgttcttc tagtgtagcc
gtagttaggc caccacttca agaactctgt agcaccgcct 6360acatacctcg
ctctgctaat cctgttacca gtggctgctg ccagtggcga taagtcgtgt
6420cttaccgggt tggactcaag acgatagtta ccggataagg cgcagcggtc
gggctgaacg 6480gggggttcgt gcacacagcc cagcttggag cgaacgacct
acaccgaact gagataccta 6540cagcgtgagc tatgagaaag cgccacgctt
cccgaaggga gaaaggcgga caggtatccg 6600gtaagcggca gggtcggaac
aggagagcgc acgagggagc ttccaggggg aaacgcctgg 6660tatctttata
gtcctgtcgg gtttcgccac ctctgacttg agcgtcgatt tttgtgatgc
6720tcgtcagggg ggcggagcct atggaaaaac gccagcaacg cggccttttt
acggttcctg 6780gccttttgct ggccttttgc tcacatgttc tttcctgcgt
tatcccctga ttctgtggat 6840aaccgtatta ccgcctttga gtgagctgat
accgctcgcc gcagccgaac gaccgagcgc 6900agcgagtcag tgagcgagga
agcggaagag cgcccaatac gcaaaccgcc tctccccgcg 6960cgttggccga
ttcattaatg cagctggcac gacaggtttc ccgactggaa agcgggcagt
7020gagcgcaacg caattaatgt gagttagctc actcattagg caccccaggc
tttacacttt 7080atgcttccgg ctcgtatgtt gtgtggaatt gtgagcggat
aacaatttca cacaggaaac 7140agctatgacc atgattacgc caagctattt
aggtgacact atagaatact caagctatgc 7200atccaacgcg ttgggagctc
tcccatatgg tcgacctgca ggcggccgca ctagtgatta 7260tgggtttgtt
tgcgtgttgc acaaaataca caaggctgtc gaccgacaca aaaatgaagt
7320ttccctatgt tgcgttgtcg tacatcaacg tgacgctgtg cacctacacc
gccatgttgg 7380tgggatacat ggtaacattc aatgactcca gcgaattgaa
atatttacaa tactggttgc 7440tgttgtcgtt tttgatgtcc gtggtgctaa
acgctccgac tctgtggacg atgctcaaaa 7500ccacagaagc ccatgaagta
atttacgaaa tgaagctgtt ccacgccatg tactttagta 7560acgtgctgtt
gaattatgtg gtgtttttgg acaatcaaat gggtacaaat tttgtttttg
7620ttaacaattt aattcactgt tgtgtacttt ttatgatatt tgttgaattg
cttatcctgt 7680tgggccacac aatgggcacg tacacggatt atcaatatgt
caaatcgtgt tatatggtta 7740tattgtttgt ttcagttatg agtgttacta
ttgttatggg tttagagtgt ttgaaaacga 7800aactaattga taacagtttg
atgtttaacg cgtttgtgtg cgctttgtac attgtgattg 7860caataatgtg
gtctttaaaa aataatttga ctagttatta cgtttcaaat ttacaaagta
7920ttcaagttgt tccgttttca tacaacgatc cgccgccacc gttctctaac
attgtaatgg 7980atgacataaa aaataaaaaa taatttataa aaatgttttt
tattctttca caattctgta 8040aattctaaac aaaaaatata aatacaaact
tattatgttg tcgtctaaat aaacatcaat 8100ttgtaaatct ggacacctat
tcatatcatt gatattacag tctactatac aacaattaaa 8160actaaccaaa
ttatctttac aacaattaaa gcaattaaaa caatttaaat aatcttcatt
8220gtcgtcgtat aagtttattt gcactgtaga cggtgttaca cagcgatcca
ttcgacgttc 8280gtgttcgatc aactttctcg ccaacttgta ccataaaaat
tgtttggaca aaaagttttc 8340caacaatggt aacggccaat tcaacgtgac
gatgcgcacg tcctcgggta tgcatttgtt 8400aaaaaacaca cagctcgctt
taccaaacga aagcaaaggt actaaatatg gcgccattgg 8460ctgatttgtt
attccaagat aattacaaat aaactgatcc gtcgtggggt gataactggc
8520aggtgtcagc tttaaataat cttcaacgtt gttgtcgcgc aaaagtctgc
attttacacg 8580cgttgttaat cccacgactt ttgcatgtaa aatcggatcc
aaatactgca gaatcgtgtc 8640tataatttct aatggtaaac gtatgcgttt
tgctcgtggg cgctttgtaa cgctcgacat 8700cctaataaca actaacacaa
aactaaaatg atactcaata tattgctttt acagttcatc 8760tttaggttta
aactgtgcgt ttatcgcgtt gagcaagtcg ccgttatcgg catcaatctc
8820ccaagcaaac aggccgccca atttatttcg gtcgacatat ttaacttttc
ctaacacaga 8880gtcgacgctg tcaaacgaaa tcaaatcacc tttactttta
tcgaaaacgt acgacgcttg 8940agcggcgctg tcaaacgtgt acacataatt
gttgagatct ttttgaattt gacgataatc 9000tacaacaccg tcctcccacg
tgcccgaccc cggcccgttg ccagtgccgg aaaaatagtt 9060gtcattcgta
taatttgtta cgccggtcca gccgcggccg tacatggcga cgcccacaat
9120tattttgttg ggatcgacgc cttgtttcag taacgcatcg acagcgtagt
gtgtagtgta 9180tagctcttcc gagttccaac ttggcgcgta gactgttgtt
tggtagccca aatccgtgtt 9240tgaccaagcc cctttaaaat cgtaactcat
gagaaatatt ttgcctaatg acttttgcgc 9300ttcggcgtag tttaccacgg
caatcttgtc gtaacccgcg cttatagcgc ttgttaattc 9360gtaaaccctg
ccggtttgcg cttcgaggtc gtctagcatt gcgcgcagct cctccaacaa
9420caaaatgtat gttttggcgt caccgtccgc atcgcccaac gacgggttag
cccctttgcc 9480gcccggaaac tcccaatcga tgtctacacc gtcaaagaat
ttccacactt gcagaaattc 9540cttaaccgaa tctacaaaaa cgtttctttt
ttcaacatcg tgcataaaat aaaatgggtc 9600tgatagagtc cagcctccta
ttgaaggaag aatttttaaa tgggggtttg ctaattttgc 9660cgccatcaac
tgtccaaaat tgcctttata cggctcgttc caagcggaca cacctttttg
9720gggtttttgt acggcggccc acggatcgtg aatggcaact ttgaaatctt
cgcgtccctt 9780gcacgatctt tgcaaagatt caaagctgat cctccccagc
atgcctgcta ttgtcttccc 9840aatcctcccc cttgctgtcc tgccccaccc
caccccccag aatagaatga cacctactca 9900gacaatgcga tgcaatttcc
tcattttatt aggaaaggac agtgggagtg gcaccttcca 9960gggtcaagga
aggcacgggg gaggggcaaa caacagatgg ctggcaacta gaaggcacag
10020tcgaggcggg cccttactcc tctctaacac gagattccca atcggacagg
atggccctca 10080gtgattgttt gatagtgatt tcgggtttcc atccagtagt
atcatggagg cgggcatgag 10140agcctctaac acgacgttgc tcggcacgcc
tcattctggc gggatcttga acgatttcca 10200gctcaacttg agcaatatcg
gccaacagct cgatgagttc acgaattttt tgttcttgtc 10260cagagcacac
gttgtaaacg gctccggcct ctccgtggga caacagtctc aggtaagcag
10320acagcacgtc ttgaacgtcc aagaagtccc tcgacacgtc gatgtcacca
acttcgaggc 10380ggtttgcctg gaggccttgt ttcatcctag caatttggcg
agcagcagaa gcgatcacga 10440acgaatcctt ttggccagga ccaatgtggt
tgaaaggacg ggcaaccaaa acacgccagc 10500cctcagtgat tccccattgg
agacacagag attcagcagc caatttggac acagcgtaag 10560ggttacgggg
atgagggatg agttcctcgt gaataggcaa ggcagcctcg gccacttgac
10620cgtacacatc accggaggag atgtacagga aggttccgga gaatcctcta
gccttcagag 10680cttggagcaa gttcagtgtt cccagcaggt tgatttggag
agtacgagca ggatcacgga 10740atgcctcggg tacgtatgtt tgaccagcga
ggtgaataac agcatccggc aattcgggcc 10800acaaatcgcc caaagagtcg
ggttccaaca agtcgtagcg gtgaggaaca gggagcaaag 10860cccaaggtgt
gtgagcagcc gccaagtatg cctggaggtg tttaccgacg aagccagaca
10920gtcccgttac gaacaagcgt tgagtcatgg ttcgcgaggt cacttggttg
ttcacgatct 10980tgtcgccgcc agtgtcaact tgcaactgaa acaatatcca
acatgaacgt caatttatac 11040tgccctaatg gcgaacacga taacaatatt
tcttttatta tgccctctaa aaccaacgcg 11100gttatcgttt atttattcaa
attagatata gaacatccgc cgacatacaa tgttaatgca 11160aaaacgcgtt
tggtgagcgg atacgaaaac agtcggccga taaacattaa tctgaggtcg
11220ataacaccgt ccttgaacgg aacacgagga gcgtacgtga tcagctgcat
tcgcgcgccg 11280cgcctttatc gagatttatt tgcatacaac aagtacactg
cgccgttggg atttgtggta 11340acgcgcacac atgcagagct gcaagtgtgg
cacattttgt ctgtgcgcaa aacctttgaa 11400gccaaaagta cgaggtccgt
tacgggcatg ctagcgcaca cggacaatgg acccgacaaa 11460ttctacgcca
aggatttaat gataatgtcg ggcaacgtat ccgttcattt tatcaataac
11520ctacaaaaat gtcgcgcgca tcacaaagac atcgacgcgc gtagaattct
acccgtaaag 11580cgagtttagt tatgagccat gtgcaaaaca tgacatcagc
ttttattttt ataacaaatg 11640acatcatttc ttgattgtgt tttacacgta
gaattctact cgtaaagccg agagttcagt 11700tttgaaaaac aaatgacatc
atctttttga ttgtgcttta cgagtagaat tctacccgta 11760aatcaagttc
ggttttgaaa aacaaatgag tcatattgta tgatatcata ttgcaaaaca
11820aatgactcat caatcgatcg tgcg 11844212420DNAArtificial
SequencepVL1393-polh-antiCD20-IgG 2agcgcccgat ggtgggacgg tatgaataat
ccggaatatt tataggtttt tttattacaa 60aactgttacg aaaacagtaa aatacttatt
tatttgcgag atggttatca ttttaattat 120ctccatgatg ctagctgagt
ttcaaattgg taattggacc cttcattaag atttcacaca 180gatcagccga
ctgcgaatag aaactcacct aggcactagt ctcgagatca tggagataat
240taaaatgata accatctcgc aaataaataa gtattttact gttttcgtaa
cagttttgta 300ataaaaaaac ctataaatat tccggattat tcataccgtc
ccaccatcgg gcgctgttta 360aacaccatgg gctggtccct gatcctgctg
ttcctggtgg ccgtggccac ccgcgtgctg 420agccaggtgc agctgcagca
gcccggcgcc gagctggtga agcccggcgc ctccgtgaag 480atgagctgca
aggccagcgg ctacaccttc acctcctaca atatgcactg ggtgaagcag
540accccgggcc gcggcctgga gtggatcggc gccatctacc cgggcaacgg
cgatacctcc 600tacaaccaga agttcaaggg caaggccacc ctgaccgccg
ataagagctc cagcaccgcc 660tacatgcagc tgtcctcgct gaccagcgag
gacagcgccg tgtactactg cgcccgcagc 720acctactacg gcggcgattg
gtacttcaac gtgtggggcg ccggcaccac cgtgaccgtg 780agcgccgcca
gcaccaaggg cccctccgtg ttcccgctgg ccccgtcgag caagagcacc
840agcggcggca ccgccgccct gggctgcctg gtgaaggatt acttcccgga
gcccgtgacc 900gtgtcgtgga acagcggcgc cctgaccagc ggcgtgcaca
ccttcccagc cgtgctgcag 960agctcgggcc tgtactcgct gagcagcgtg
gtgaccgtgc cgtcgagctc gctgggcacc 1020cagacctaca tctgcaacgt
gaaccacaag ccatccaata ccaaggtgga taagaaggcc 1080gagcccaaga
gctgcgacaa gacccacacc tgccccccct gcccggcccc agagctgctg
1140ggcggcccat ccgtgttcct gttccccccg aagccgaagg acaccctgat
gatcagccgc 1200acccccgagg tgacctgcgt ggtggtggat gtgagccacg
aggaccccga ggtgaagttc 1260aactggtacg tggatggcgt ggaggtgcac
aacgccaaga ccaagccccg cgaggagcag 1320tacaacagca cctaccgcgt
ggtgtcggtg ctgaccgtgc tgcaccagga ttggctgaac 1380ggcaaggagt
acaagtgcaa ggtgtccaac aaggccctgc ccgccccgat cgagaagacc
1440atctccaagg ccaagggcca gccacgcgag ccgcaggtgt acaccctgcc
accctcccgc 1500gatgagctga ccaagaacca ggtgagcctg acctgcctgg
tgaagggctt ctacccctcg 1560gatatcgccg tggagtggga gagcaacggc
cagccggaga acaactacaa gaccacccca 1620cccgtgctgg acagcgacgg
cagcttcttc ctgtacagca agctgaccgt ggacaagtcg 1680cgctggcagc
agggcaacgt gttctcctgc agcgtgatgc acgaggccct gcacaaccac
1740tacacccaga agagcctgag cctgagcccc ggcaagtaac ctgcagatct
gcctcgactg 1800tgccttctag ttgccagcca tctgttgttt gcccctcccc
cgtgccttcc ttgaccctgg 1860aaggtgccac tcccactgtc ctttcctaat
aaaatgagga aattgcatcg cattgtctga 1920gtaggtgtca ttctattctg
gggggtgggg tggggcagga cagcaagggg gaggattggg 1980aagacaatag
caggcatgct ggggaggatc tgatcctttc ctgggacccg gcaagaacca
2040aaaactcact ctcttcaagg aaatccgtaa tgttaaaccc gacacgatga
agcttgtcgt 2100tggatggaaa ggaaaagagt tctacaggga aacttggacc
cgcttcatgg aagacagctt 2160ccccattgtt aacgaccaag aagtgatgga
tgttttcctt gttgtcaaca tgcgtcccac 2220tagacccaac cgttgttaca
aattcctggc ccaacacgct ctgcgttgcg accccgacta 2280tgtacctcat
gacgtgatta ggatcgtcga gccttcatgg gtgggcagca acaacgagta
2340ccgcatcagc ctggctaaga agggcggcgg ctgcccaata atgaaccttc
actctgagta 2400caccaactcg ttcgaacagt tcatcgatcg tgtcatctgg
gagaacttct acaagcccat 2460cgtttacatc ggtaccgact ctgctgaaga
ggaggaaatt ctccttgaag tttccctggt 2520gttcaaagta aaggagtttg
caccagacgc acctctgttc actggtccgg cgtattaaaa 2580cacgatacat
tgttattagt acatttatta agcgctagat tctgtgcgtt gttgatttac
2640agacaattgt tgtacgtatt ttaataattc attaaattta taatctttag
ggtggtatgt 2700tagagcgaaa atcaaatgat tttcagcgtc tttatatctg
aatttaaata ttaaatcctc 2760aatagatttg taaaataggt ttcgattagt
ttcaaacaag ggttgttttt ccgaaccgat 2820ggctggacta tctaatggat
tttcgctcaa cgccacaaaa cttgccaaat cttgtagcag 2880caatctagct
ttgtcgatat tcgtttgtgt tttgttttgt aataaaggtt cgacgtcgtt
2940caaaatatta tgcgcttttg tatttctttc atcactgtcg ttagtgtaca
attgactcga 3000cgtaaacacg ttaaataaag cttggacata tttaacatcg
ggcgtgttag ctttattagg 3060ccgattatcg tcgtcgtccc aaccctcgtc
gttagaagtt gcttccgaag acgattttgc 3120catagccaca cgacgcctat
taattgtgtc ggctaacacg tccgcgatca aatttgtagt 3180tgagcttttt
ggaattattt ctgattgcgg gcgtttttgg gcgggtttca atctaactgt
3240gcccgatttt aattcagaca acacgttaga aagcgatggt gcaggcggtg
gtaacatttc 3300agacggcaaa tctactaatg gcggcggtgg tggagctgat
gataaatcta ccatcggtgg 3360aggcgcaggc ggggctggcg gcggaggcgg
aggcggaggt ggtggcggtg atgcagacgg 3420cggtttaggc tcaaatgtct
ctttaggcaa cacagtcggc acctcaacta ttgtactggt 3480ttcgggcgcc
gtttttggtt tgaccggtct gagacgagtg cgattttttt cgtttctaat
3540agcttccaac aattgttgtc tgtcgtctaa aggtgcagcg ggttgaggtt
ccgtcggcat 3600tggtggagcg ggcggcaatt cagacatcga tggtggtggt
ggtggtggag gcgctggaat 3660gttaggcacg ggagaaggtg gtggcggcgg
tgccgccggt ataatttgtt ctggtttagt 3720ttgttcgcgc acgattgtgg
gcaccggcgc aggcgccgct ggctgcacaa cggaaggtcg 3780tctgcttcga
ggcagcgctt ggggtggtgg caattcaata ttataattgg aatacaaatc
3840gtaaaaatct gctataagca ttgtaatttc gctatcgttt accgtgccga
tatttaacaa 3900ccgctcaatg taagcaattg tattgtaaag agattgtctc
aagctccgca cgccgataac 3960aagccttttc atttttacta cagcattgta
gtggcgagac acttcgctgt cgtcgacgta 4020catgtatgct ttgttgtcaa
aaacgtcgtt ggcaagcttt aaaatattta aaagaacatc 4080tctgttcagc
accactgtgt tgtcgtaaat gttgtttttg ataatttgcg cttccgcagt
4140atcgacacgt tcaaaaaatt gatgcgcatc aattttgttg ttcctattat
tgaataaata 4200agattgtaca gattcatatc tacgattcgt catggccacc
acaaatgcta cgctgcaaac 4260gctggtacaa ttttacgaaa actgcaaaaa
cgtcaaaact cggtataaaa taatcaacgg 4320gcgctttggc aaaatatcta
ttttatcgca caagcccact agcaaattgt atttgcagaa 4380aacaatttcg
gcgcacaatt ttaacgctga cgaaataaaa gttcaccagt taatgagcga
4440ccacccaaat tttataaaaa tctattttaa tcacggttcc atcaacaacc
aagtgatcgt 4500gatggactac attgactgtc ccgatttatt tgaaacacta
caaattaaag gcgagctttc 4560gtaccaactt gttagcaata ttattagaca
gctgtgtgaa gcgctcaacg atttgcacaa 4620gcacaatttc atacacaacg
acataaaact cgaaaatgtc ttatatttcg aagcacttga 4680tcgcgtgtat
gtttgcgatt acggattgtg caaacacgaa aactcactta gcgtgcacga
4740cggcacgttg gagtatttta gtccggaaaa aattcgacac acaactatgc
acgtttcgtt 4800tgactggtac gcggcgtgtt aacatacaag ttgctaaccg
gcggttcgta atcatggtca 4860tagctgtttc ctgtgtgaaa ttgttatccg
ctcacaattc cacacaacat acgagccgga 4920agcataaagt gtaaagcctg
gggtgcctaa tgagtgagct aactcacatt aattgcgttg 4980cgctcactgc
ccgctttcca gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc
5040caacgcgcgg ggagaggcgg tttgcgtatt gggcgctctt ccgcttcctc
gctcactgac 5100tcgctgcgct cggtcgttcg gctgcggcga gcggtatcag
ctcactcaaa ggcggtaata 5160cggttatcca cagaatcagg ggataacgca
ggaaagaaca tgtgagcaaa aggccagcaa 5220aaggccagga accgtaaaaa
ggccgcgttg ctggcgtttt tccataggct ccgcccccct 5280gacgagcatc
acaaaaatcg acgctcaagt cagaggtggc gaaacccgac aggactataa
5340agataccagg cgtttccccc tggaagctcc ctcgtgcgct ctcctgttcc
gaccctgccg 5400cttaccggat acctgtccgc ctttctccct tcgggaagcg
tggcgctttc tcatagctca 5460cgctgtaggt atctcagttc ggtgtaggtc
gttcgctcca agctgggctg tgtgcacgaa 5520ccccccgttc agcccgaccg
ctgcgcctta tccggtaact atcgtcttga gtccaacccg 5580gtaagacacg
acttatcgcc actggcagca gccactggta acaggattag cagagcgagg
5640tatgtaggcg gtgctacaga gttcttgaag tggtggccta actacggcta
cactagaagg 5700acagtatttg gtatctgcgc tctgctgaag ccagttacct
tcggaaaaag agttggtagc 5760tcttgatccg gcaaacaaac caccgctggt
agcggtggtt tttttgtttg caagcagcag 5820attacgcgca gaaaaaaagg
atctcaagaa gatcctttga tcttttctac ggggtctgac 5880gctcagtgga
acgaaaactc acgttaaggg attttggtca tgagattatc aaaaaggatc
5940ttcacctaga tccttttaaa ttaaaaatga agttttaaat caatctaaag
tatatatgag 6000taaacttggt ctgacagtta ccaatgctta atcagtgagg
cacctatctc agcgatctgt 6060ctatttcgtt catccatagt tgcctgactc
cccgtcgtgt agataactac gatacgggag 6120ggcttaccat ctggccccag
tgctgcaatg ataccgcgag acccacgctc accggctcca 6180gatttatcag
caataaacca gccagccgga agggccgagc gcagaagtgg tcctgcaact
6240ttatccgcct ccatccagtc tattaattgt tgccgggaag ctagagtaag
tagttcgcca 6300gttaatagtt tgcgcaacgt tgttgccatt gctacaggca
tcgtggtgtc acgctcgtcg 6360tttggtatgg cttcattcag ctccggttcc
caacgatcaa ggcgagttac atgatccccc 6420atgttgtgca aaaaagcggt
tagctccttc ggtcctccga tcgttgtcag aagtaagttg 6480gccgcagtgt
tatcactcat ggttatggca gcactgcata attctcttac tgtcatgcca
6540tccgtaagat gcttttctgt gactggtgag tactcaacca agtcattctg
agaatagtgt 6600atgcggcgac cgagttgctc ttgcccggcg tcaatacggg
ataataccgc gccacatagc 6660agaactttaa aagtgctcat cattggaaaa
cgttcttcgg ggcgaaaact ctcaaggatc 6720ttaccgctgt tgagatccag
ttcgatgtaa cccactcgtg cacccaactg atcttcagca 6780tcttttactt
tcaccagcgt ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa
6840aagggaataa gggcgacacg gaaatgttga atactcatac tcttcctttt
tcaatattat 6900tgaagcattt atcagggtta ttgtctcatg agcggataca
tatttgaatg tatttagaaa 6960aataaacaaa taggggttcc gcgcacattt
ccccgaaaag tgccacctga cgtctaagaa 7020accattatta tcatgacatt
aacctataaa aataggcgta tcacgaggcc ctttcgtctc 7080gcgcgtttcg
gtgatgacgg tgaaaacctc tgacacatgc agctcccgga gacggtcaca
7140gcttgtctgt aagcggatgc cgggagcaga caagcccgtc agggcgcgtc
agcgggtgtt 7200ggcgggtgtc ggggctggct taactatgcg gcatcagagc
agattgtact gagagtgcac 7260catatgcggt gtgaaatacc gcacagatgc
gtaaggagaa aataccgcat caggcgccat 7320tcgccattca ggctgcgcaa
ctgttgggaa gggcgatcgg tgcgggcctc ttcgctatta 7380cgccagctgg
cgaaaggggg atgtgctgca aggcgattaa gttgggtaac gccagggttt
7440tcccagtcac gacgttgtaa aacgacggcc agtgccaagc tttactcgta
aagcgagttg 7500aaggatcata tttagttgcg tttatgagat aagattgaaa
gcacgtgtaa aatgtttccc 7560gcgcgttggc acaactattt acaatgcggc
caagttataa aagattctaa tctgatatgt 7620tttaaaacac ctttgcggcc
cgagttgttt gcgtacgtga ctagcgaaga agatgtgtgg 7680accgcagaac
agatagtaaa acaaaaccct agtattggag caataatcga tttaaccaac
7740acgtctaaat attatgatgg tgtgcatttt ttgcgggcgg gcctgttata
caaaaaaatt 7800caagtacctg gccagacttt gccgcctgaa agcatagttc
aagaatttat tgacacggta 7860aaagaattta cagaaaagtg tcccggcatg
ttggtgggcg tgcactgcac acacggtatt 7920aatcgcaccg gttacatggt
gtgcagatat ttaatgcaca ccctgggtat tgcgccgcag 7980gaagccatag
atagattcga aaaagccaga ggtcacaaaa ttgaaagaca aaattacgtt
8040caagatttat taatttaatt aatattattt gcattcttta acaaatactt
tatcctattt 8100tcaaattgtt gcgcttcttc cagcgaacca aaactatgct
tcgcttgctc cgtttagctt 8160gtagccgatc agtggcgttg ttccaatcga
cggtaggatt aggccggata ttctccacca 8220caatgttggc aacgttgatg
ttacgtttat gcttttggtt ttccacgtac gtcttttggc 8280cggtaatagc
cgtaaacgta gtgccgtcgc gcgtcacgca caacaccgga tgtttgcgct
8340tgtccgcggg gtattgaacc gcgcgatccg acaaatccac cactttggca
actaaatcgg 8400tgacctgcgc gtcttttttc tgcattattt cgtctttctt
ttgcatggtt tcctggaagc 8460cggtgtacat gcggtttaga tcagtcatga
cgcgcgtgac ctgcaaatct ttggcctcga 8520tctgcttgtc cttgatggca
acgatgcgtt caataaactc ttgtttttta acaagttcct 8580cggttttttg
cgccaccacc gcttgcagcg cgtttgtgtg ctcggtgaat gtcgcaatca
8640gcttagtcac caactgtttg ctctcctcct cccgttgttt gatcgcggga
tcgtacttgc 8700cggtgcagag cacttgagga attacttctt ctaaaagcca
ttcttgtaat tctatggcgt 8760aaggcaattt ggacttcata atcagctgaa
tcacgccgga tttagtaatg agcactgtat 8820gcggctgcaa atacagcggg
tcgccccttt tcacgacgct gttagaggta gggcccccat 8880tttggatggt
ctgctcaaat aacgatttgt atttattgtc tacatgaaca cgtatagctt
8940tatcacaaac tgtatatttt aaactgttag cgacgtcctt ggccacgaac
cggacctgtt 9000ggtcgcgctc tagcacgtac cgcaggttga acgtatcttc
tccaaattta aattctccaa 9060ttttaacgcg agccattttg atacacgtgt
gtcgattttg caacaactat tgttttttaa 9120cgcaaactaa acttattgtg
gtaagcaata attaaatatg ggggaacatg cgccgctaca 9180acactcgtcg
ttatgaacgc agacggcgcc ggtctcggcg caagcggcta aaacgtgttg
9240cgcgttcaac gcggcaaaca tcgcaaaagc caatagtaca gttttgattt
gcatattaac 9300ggcgattttt taaattatct tatttaataa atagttatga
cgcctacaac tccccgcccg 9360cgttgactcg ctgcacctcg agcagttcgt
tgacgccttc ctccgtgtgg ccgaacacgt 9420cgagcgggtg gtcgatgacc
agcggcgtgc cgcacgcgac gcacaagtat ctgtacaccg 9480aatgatcgtc
gggcgaaggc acgtcggcct ccaagtggca atattggcaa attcgaaaat
9540atatacagtt gggttgtttg cgcatatcta tcgtggcgtt gggcatgtac
gtccgaacgt 9600tgatttgcat gcaagccgaa attaaatcat tgcgattagt
gcgattaaaa cgttgtacat 9660cctcgctttt aatcatgccg tcgattaaat
cgcgcaatcg agtcaagtga tcaaagtgtg 9720gaataatgtt ttctttgtat
tcccgagtca agcgcagcgc gtattttaac aaactagcca 9780tcttgtaagt
tagtttcatt taatgcaact ttatccaata atatattatg tatcgcacgt
9840caagaattaa caatgcgccc gttgtcgcat ctcaacacga ctatgataga
gatcaaataa 9900agcgcgaatt aaatagcttg cgacgcaacg tgcacgatct
gtgcacgcgt tccggcacga 9960gctttgattg taataagttt ttacgaagcg
atgacatgac ccccgtagtg acaacgatca 10020cgcccaaaag aactgccgac
tacaaaatta ccgagtatgt cggtgacgtt aaaactatta 10080agccatccaa
tcgaccgtta gtcgaatcag gaccgctggt gcgagaagcc gcgaagtatg
10140gcgaatgcat cgtataacgt gtggagtccg ctcattagag cgtcatgttt
agacaagaaa 10200gctacatatt taattgatcc cgatgatttt attgataaat
tgaccctaac tccatacacg 10260gtattctaca atggcggggt tttggtcaaa
atttccggac tgcgattgta catgctgtta 10320acggctccgc ccactattaa
tgaaattaaa aattccaatt ttaaaaaacg cagcaagaga 10380aacatttgta
tgaaagaatg cgtagaagga aagaaaaatg tcgtcgacat gctgaacaac
10440aagattaata tgcctccgtg tataaaaaaa atattgaacg atttgaaaga
aaacaatgta 10500ccgcgcggcg gtatgtacag gaagaggttt atactaaact
gttacattgc aaacgtggtt 10560tcgtgtgcca agtgtgaaaa ccgatgttta
atcaaggctc tgacgcattt ctacaaccac 10620gactccaagt gtgtgggtga
agtcatgcat cttttaatca aatcccaaga tgtgtataaa 10680ccaccaaact
gccaaaaaat gaaaactgtc gacaagctct gtccgtttgc tggcaactgc
10740aagggtctca atcctatttg taattattga ataataaaac aattataaat
gctaaatttg 10800ttttttatta acgatacaaa ccaaacgcaa caagaacatt
tgtagtatta tctataattg 10860aaaacgcgta gttataatcg ctgaggtaat
atttaaaatc attttcaaat gattcacagt 10920taatttgcga caatataatt
ttattttcac ataaactaga cgccttgtcg tcttcttctt 10980cgtattcctt
ctctttttca tttttctcct cataaaaatt aacatagtta ttatcgtatc
11040catatatgta tctatcgtat agagtaaatt ttttgttgtc ataaatatat
atgtcttttt 11100taatggggtg tatagtaccg ctgcgcatag tttttctgta
atttacaaca gtgctatttt 11160ctggtagttc ttcggagtgt gttgctttaa
ttattaaatt tatataatca atgaatttgg 11220gatcgtcggt tttgtacaat
atgttgccgg catagtacgc agcttcttct agttcaatta 11280caccattttt
tagcagcacc ggattaacat aactttccaa aatgttgtac gaaccgttaa
11340acaaaaacag ttcacctccc ttttctatac tattgtctgc gagcagttgt
ttgttgttaa 11400aaataacagc cattgtaatg agacgcacaa actaatatca
caaactggaa atgtctatca 11460atatatagtt gctgatatct ccccagcatg
cctgctattg tcttcccaat cctccccctt 11520gctgtcctgc cccaccccac
cccccagaat agaatgacac ctactcagac aatgcgatgc 11580aatttcctca
ttttattagg aaaggacagt gggagtggca ccttccaggg tcaaggaagg
11640cacgggggag gggcaaacaa cagatggctg gcaactagaa ggcacagtcg
aggcgaattc 11700ttagcactcg ccgcggttga aggacttggt caccgggctc
gacaggccct ggtgggtcac 11760ctcgcaggcg tacaccttgt gcttctcgta
atcggccttg gacagggtca gggtggagct 11820cagcgagtag gtgctatcct
tggaatcctg ctcggtcacg ctctcctggg agttgccgga 11880ctgcagggcg
ttatccacct tccactgcac cttggcctcg cgggggtaga agttgttcag
11940caggcacacc acggaggcgg tgccggactt cagctgctcg tccgacggcg
ggaagatgaa 12000cacggagggg gcggccacgg tgcgcttgat ctccagcttg
gtgccgccgc cgaaggtcgg 12060ggggttgctg gtccactgct ggcagtagta
ggtggcggca tcctcggcct ccacgcggga 12120gatggtcagg ctgtaggagg
tgccgctgcc gctgccggag aagcgcaccg gcacgccgga 12180ggccagattg
gaggtggcgt agatccaggg cttcggggag ctgcctggct tctgctggaa
12240ccagtgaatg tagctcacgc tggaggaggc gcggcaggtc atggtcacct
tctcgcccgg 12300cgaggcgctc aggatggcgg ggctctgcga cagcacgatc
tggccgcggc tcatgatcac 12360ggaggcgctg atcagcagga aggagatgat
ctgcacctgg aaatccatgg tggcggccgc 12420312812DNAArtificial
SequencepVL1393-p6.9-antiCD20-IgG 3tccatggtgg cggccgcgtt taaattgtgt
aatttatgta gctgtaattt ttaccttatt 60aatatttttt acgctttgca ttcgacgact
gaactcccaa atatatgttt aactcgtctt 120ggtcgtttga atttttgttg
ctgtgtttcc taatattttc catcacctta aatatgttat 180tgtaatcctc
aatgttgaac ttgcaattgg acacggcata gttttccata gtcgtgtaaa
240acatggtatt ggctgcattg taatacatcc gactgagcgg gtacggatct
atgtgtttga 300gcagcctgtt caaaaactct gcatcgtcgc aaaacggaat
ttgctagctg agtttcaaat 360tggtaattgg acccttcatt aagatttcac
acagatcagc cgactgcgaa tagaaactca 420cctaggcact agtctcgaga
aattccgttt tgcgacgatg cagagttttt gaacaggctg 480ctcaaacaca
tagatccgta cccgctcagt cggatgtatt acaatgcagc caataccatg
540ttttacacga ctatggaaaa ctatgccgtg tccaattgca agttcaacat
tgaggattac 600aataacatat ttaaggtgat ggaaaatatt aggaaacaca
gcaacaaaaa ttcaaacgac 660caagacgagt taaacatata tttgggagtt
cagtcgtcga atgcaaagcg taaaaaatat 720taataaggta aaaattacag
ctacataaat tacacaattt aaacgtttaa acaccatggg 780ctggtccctg
atcctgctgt tcctggtggc cgtggccacc cgcgtgctga gccaggtgca
840gctgcagcag cccggcgccg agctggtgaa gcccggcgcc tccgtgaaga
tgagctgcaa 900ggccagcggc tacaccttca cctcctacaa tatgcactgg
gtgaagcaga ccccgggccg 960cggcctggag tggatcggcg ccatctaccc
gggcaacggc gatacctcct acaaccagaa 1020gttcaagggc aaggccaccc
tgaccgccga taagagctcc agcaccgcct acatgcagct 1080gtcctcgctg
accagcgagg acagcgccgt gtactactgc gcccgcagca cctactacgg
1140cggcgattgg tacttcaacg tgtggggcgc cggcaccacc gtgaccgtga
gcgccgccag 1200caccaagggc ccctccgtgt tcccgctggc cccgtcgagc
aagagcacca gcggcggcac 1260cgccgccctg ggctgcctgg tgaaggatta
cttcccggag cccgtgaccg tgtcgtggaa 1320cagcggcgcc ctgaccagcg
gcgtgcacac cttcccagcc gtgctgcaga gctcgggcct 1380gtactcgctg
agcagcgtgg tgaccgtgcc gtcgagctcg ctgggcaccc agacctacat
1440ctgcaacgtg aaccacaagc catccaatac caaggtggat aagaaggccg
agcccaagag 1500ctgcgacaag acccacacct gccccccctg cccggcccca
gagctgctgg gcggcccatc 1560cgtgttcctg ttccccccga agccgaagga
caccctgatg atcagccgca cccccgaggt 1620gacctgcgtg gtggtggatg
tgagccacga ggaccccgag gtgaagttca actggtacgt 1680ggatggcgtg
gaggtgcaca acgccaagac caagccccgc gaggagcagt acaacagcac
1740ctaccgcgtg gtgtcggtgc tgaccgtgct gcaccaggat tggctgaacg
gcaaggagta 1800caagtgcaag gtgtccaaca aggccctgcc cgccccgatc
gagaagacca tctccaaggc 1860caagggccag ccacgcgagc cgcaggtgta
caccctgcca ccctcccgcg atgagctgac 1920caagaaccag gtgagcctga
cctgcctggt gaagggcttc tacccctcgg atatcgccgt 1980ggagtgggag
agcaacggcc agccggagaa caactacaag accaccccac ccgtgctgga
2040cagcgacggc agcttcttcc tgtacagcaa gctgaccgtg gacaagtcgc
gctggcagca 2100gggcaacgtg ttctcctgca gcgtgatgca cgaggccctg
cacaaccact acacccagaa 2160gagcctgagc ctgagccccg gcaagtaacc
tgcagatctg cctcgactgt gccttctagt 2220tgccagccat ctgttgtttg
cccctccccc gtgccttcct tgaccctgga aggtgccact 2280cccactgtcc
tttcctaata aaatgaggaa attgcatcgc attgtctgag taggtgtcat
2340tctattctgg ggggtggggt ggggcaggac agcaaggggg aggattggga
agacaatagc 2400aggcatgctg gggaggatct gatcctttcc tgggacccgg
caagaaccaa aaactcactc 2460tcttcaagga aatccgtaat gttaaacccg
acacgatgaa gcttgtcgtt ggatggaaag 2520gaaaagagtt ctacagggaa
acttggaccc gcttcatgga agacagcttc cccattgtta 2580acgaccaaga
agtgatggat gttttccttg ttgtcaacat gcgtcccact agacccaacc
2640gttgttacaa attcctggcc caacacgctc tgcgttgcga ccccgactat
gtacctcatg 2700acgtgattag gatcgtcgag ccttcatggg tgggcagcaa
caacgagtac cgcatcagcc 2760tggctaagaa gggcggcggc tgcccaataa
tgaaccttca ctctgagtac accaactcgt 2820tcgaacagtt catcgatcgt
gtcatctggg agaacttcta caagcccatc gtttacatcg 2880gtaccgactc
tgctgaagag gaggaaattc tccttgaagt ttccctggtg ttcaaagtaa
2940aggagtttgc accagacgca cctctgttca ctggtccggc gtattaaaac
acgatacatt 3000gttattagta catttattaa gcgctagatt ctgtgcgttg
ttgatttaca gacaattgtt 3060gtacgtattt taataattca ttaaatttat
aatctttagg gtggtatgtt agagcgaaaa 3120tcaaatgatt ttcagcgtct
ttatatctga atttaaatat taaatcctca atagatttgt 3180aaaataggtt
tcgattagtt tcaaacaagg gttgtttttc cgaaccgatg gctggactat
3240ctaatggatt ttcgctcaac gccacaaaac ttgccaaatc ttgtagcagc
aatctagctt 3300tgtcgatatt cgtttgtgtt ttgttttgta ataaaggttc
gacgtcgttc aaaatattat 3360gcgcttttgt atttctttca tcactgtcgt
tagtgtacaa ttgactcgac gtaaacacgt 3420taaataaagc ttggacatat
ttaacatcgg gcgtgttagc tttattaggc cgattatcgt 3480cgtcgtccca
accctcgtcg ttagaagttg cttccgaaga cgattttgcc atagccacac
3540gacgcctatt aattgtgtcg gctaacacgt ccgcgatcaa atttgtagtt
gagctttttg 3600gaattatttc tgattgcggg cgtttttggg cgggtttcaa
tctaactgtg cccgatttta 3660attcagacaa cacgttagaa agcgatggtg
caggcggtgg taacatttca gacggcaaat 3720ctactaatgg cggcggtggt
ggagctgatg ataaatctac catcggtgga ggcgcaggcg 3780gggctggcgg
cggaggcgga ggcggaggtg gtggcggtga tgcagacggc ggtttaggct
3840caaatgtctc tttaggcaac acagtcggca cctcaactat tgtactggtt
tcgggcgccg 3900tttttggttt gaccggtctg agacgagtgc gatttttttc
gtttctaata gcttccaaca 3960attgttgtct gtcgtctaaa ggtgcagcgg
gttgaggttc cgtcggcatt ggtggagcgg 4020gcggcaattc agacatcgat
ggtggtggtg gtggtggagg cgctggaatg ttaggcacgg 4080gagaaggtgg
tggcggcggt gccgccggta taatttgttc tggtttagtt tgttcgcgca
4140cgattgtggg caccggcgca ggcgccgctg gctgcacaac ggaaggtcgt
ctgcttcgag 4200gcagcgcttg gggtggtggc aattcaatat tataattgga
atacaaatcg taaaaatctg 4260ctataagcat tgtaatttcg ctatcgttta
ccgtgccgat atttaacaac cgctcaatgt 4320aagcaattgt attgtaaaga
gattgtctca agctccgcac gccgataaca agccttttca 4380tttttactac
agcattgtag tggcgagaca cttcgctgtc gtcgacgtac atgtatgctt
4440tgttgtcaaa aacgtcgttg gcaagcttta aaatatttaa aagaacatct
ctgttcagca 4500ccactgtgtt gtcgtaaatg ttgtttttga taatttgcgc
ttccgcagta tcgacacgtt 4560caaaaaattg atgcgcatca attttgttgt
tcctattatt gaataaataa gattgtacag 4620attcatatct acgattcgtc
atggccacca caaatgctac gctgcaaacg ctggtacaat 4680tttacgaaaa
ctgcaaaaac gtcaaaactc ggtataaaat aatcaacggg cgctttggca
4740aaatatctat tttatcgcac aagcccacta gcaaattgta tttgcagaaa
acaatttcgg 4800cgcacaattt taacgctgac gaaataaaag ttcaccagtt
aatgagcgac cacccaaatt 4860ttataaaaat ctattttaat cacggttcca
tcaacaacca agtgatcgtg atggactaca 4920ttgactgtcc cgatttattt
gaaacactac aaattaaagg cgagctttcg taccaacttg 4980ttagcaatat
tattagacag ctgtgtgaag cgctcaacga tttgcacaag cacaatttca
5040tacacaacga cataaaactc gaaaatgtct tatatttcga agcacttgat
cgcgtgtatg 5100tttgcgatta cggattgtgc aaacacgaaa actcacttag
cgtgcacgac ggcacgttgg 5160agtattttag tccggaaaaa attcgacaca
caactatgca cgtttcgttt gactggtacg 5220cggcgtgtta acatacaagt
tgctaaccgg cggttcgtaa tcatggtcat agctgtttcc 5280tgtgtgaaat
tgttatccgc tcacaattcc acacaacata cgagccggaa gcataaagtg
5340taaagcctgg ggtgcctaat gagtgagcta actcacatta attgcgttgc
gctcactgcc 5400cgctttccag tcgggaaacc tgtcgtgcca gctgcattaa
tgaatcggcc aacgcgcggg 5460gagaggcggt ttgcgtattg ggcgctcttc
cgcttcctcg ctcactgact cgctgcgctc 5520ggtcgttcgg ctgcggcgag
cggtatcagc tcactcaaag gcggtaatac ggttatccac 5580agaatcaggg
gataacgcag gaaagaacat gtgagcaaaa ggccagcaaa aggccaggaa
5640ccgtaaaaag gccgcgttgc tggcgttttt
ccataggctc cgcccccctg acgagcatca 5700caaaaatcga cgctcaagtc
agaggtggcg aaacccgaca ggactataaa gataccaggc 5760gtttccccct
ggaagctccc tcgtgcgctc tcctgttccg accctgccgc ttaccggata
5820cctgtccgcc tttctccctt cgggaagcgt ggcgctttct catagctcac
gctgtaggta 5880tctcagttcg gtgtaggtcg ttcgctccaa gctgggctgt
gtgcacgaac cccccgttca 5940gcccgaccgc tgcgccttat ccggtaacta
tcgtcttgag tccaacccgg taagacacga 6000cttatcgcca ctggcagcag
ccactggtaa caggattagc agagcgaggt atgtaggcgg 6060tgctacagag
ttcttgaagt ggtggcctaa ctacggctac actagaagga cagtatttgg
6120tatctgcgct ctgctgaagc cagttacctt cggaaaaaga gttggtagct
cttgatccgg 6180caaacaaacc accgctggta gcggtggttt ttttgtttgc
aagcagcaga ttacgcgcag 6240aaaaaaagga tctcaagaag atcctttgat
cttttctacg gggtctgacg ctcagtggaa 6300cgaaaactca cgttaaggga
ttttggtcat gagattatca aaaaggatct tcacctagat 6360ccttttaaat
taaaaatgaa gttttaaatc aatctaaagt atatatgagt aaacttggtc
6420tgacagttac caatgcttaa tcagtgaggc acctatctca gcgatctgtc
tatttcgttc 6480atccatagtt gcctgactcc ccgtcgtgta gataactacg
atacgggagg gcttaccatc 6540tggccccagt gctgcaatga taccgcgaga
cccacgctca ccggctccag atttatcagc 6600aataaaccag ccagccggaa
gggccgagcg cagaagtggt cctgcaactt tatccgcctc 6660catccagtct
attaattgtt gccgggaagc tagagtaagt agttcgccag ttaatagttt
6720gcgcaacgtt gttgccattg ctacaggcat cgtggtgtca cgctcgtcgt
ttggtatggc 6780ttcattcagc tccggttccc aacgatcaag gcgagttaca
tgatccccca tgttgtgcaa 6840aaaagcggtt agctccttcg gtcctccgat
cgttgtcaga agtaagttgg ccgcagtgtt 6900atcactcatg gttatggcag
cactgcataa ttctcttact gtcatgccat ccgtaagatg 6960cttttctgtg
actggtgagt actcaaccaa gtcattctga gaatagtgta tgcggcgacc
7020gagttgctct tgcccggcgt caatacggga taataccgcg ccacatagca
gaactttaaa 7080agtgctcatc attggaaaac gttcttcggg gcgaaaactc
tcaaggatct taccgctgtt 7140gagatccagt tcgatgtaac ccactcgtgc
acccaactga tcttcagcat cttttacttt 7200caccagcgtt tctgggtgag
caaaaacagg aaggcaaaat gccgcaaaaa agggaataag 7260ggcgacacgg
aaatgttgaa tactcatact cttccttttt caatattatt gaagcattta
7320tcagggttat tgtctcatga gcggatacat atttgaatgt atttagaaaa
ataaacaaat 7380aggggttccg cgcacatttc cccgaaaagt gccacctgac
gtctaagaaa ccattattat 7440catgacatta acctataaaa ataggcgtat
cacgaggccc tttcgtctcg cgcgtttcgg 7500tgatgacggt gaaaacctct
gacacatgca gctcccggag acggtcacag cttgtctgta 7560agcggatgcc
gggagcagac aagcccgtca gggcgcgtca gcgggtgttg gcgggtgtcg
7620gggctggctt aactatgcgg catcagagca gattgtactg agagtgcacc
atatgcggtg 7680tgaaataccg cacagatgcg taaggagaaa ataccgcatc
aggcgccatt cgccattcag 7740gctgcgcaac tgttgggaag ggcgatcggt
gcgggcctct tcgctattac gccagctggc 7800gaaaggggga tgtgctgcaa
ggcgattaag ttgggtaacg ccagggtttt cccagtcacg 7860acgttgtaaa
acgacggcca gtgccaagct ttactcgtaa agcgagttga aggatcatat
7920ttagttgcgt ttatgagata agattgaaag cacgtgtaaa atgtttcccg
cgcgttggca 7980caactattta caatgcggcc aagttataaa agattctaat
ctgatatgtt ttaaaacacc 8040tttgcggccc gagttgtttg cgtacgtgac
tagcgaagaa gatgtgtgga ccgcagaaca 8100gatagtaaaa caaaacccta
gtattggagc aataatcgat ttaaccaaca cgtctaaata 8160ttatgatggt
gtgcattttt tgcgggcggg cctgttatac aaaaaaattc aagtacctgg
8220ccagactttg ccgcctgaaa gcatagttca agaatttatt gacacggtaa
aagaatttac 8280agaaaagtgt cccggcatgt tggtgggcgt gcactgcaca
cacggtatta atcgcaccgg 8340ttacatggtg tgcagatatt taatgcacac
cctgggtatt gcgccgcagg aagccataga 8400tagattcgaa aaagccagag
gtcacaaaat tgaaagacaa aattacgttc aagatttatt 8460aatttaatta
atattatttg cattctttaa caaatacttt atcctatttt caaattgttg
8520cgcttcttcc agcgaaccaa aactatgctt cgcttgctcc gtttagcttg
tagccgatca 8580gtggcgttgt tccaatcgac ggtaggatta ggccggatat
tctccaccac aatgttggca 8640acgttgatgt tacgtttatg cttttggttt
tccacgtacg tcttttggcc ggtaatagcc 8700gtaaacgtag tgccgtcgcg
cgtcacgcac aacaccggat gtttgcgctt gtccgcgggg 8760tattgaaccg
cgcgatccga caaatccacc actttggcaa ctaaatcggt gacctgcgcg
8820tcttttttct gcattatttc gtctttcttt tgcatggttt cctggaagcc
ggtgtacatg 8880cggtttagat cagtcatgac gcgcgtgacc tgcaaatctt
tggcctcgat ctgcttgtcc 8940ttgatggcaa cgatgcgttc aataaactct
tgttttttaa caagttcctc ggttttttgc 9000gccaccaccg cttgcagcgc
gtttgtgtgc tcggtgaatg tcgcaatcag cttagtcacc 9060aactgtttgc
tctcctcctc ccgttgtttg atcgcgggat cgtacttgcc ggtgcagagc
9120acttgaggaa ttacttcttc taaaagccat tcttgtaatt ctatggcgta
aggcaatttg 9180gacttcataa tcagctgaat cacgccggat ttagtaatga
gcactgtatg cggctgcaaa 9240tacagcgggt cgcccctttt cacgacgctg
ttagaggtag ggcccccatt ttggatggtc 9300tgctcaaata acgatttgta
tttattgtct acatgaacac gtatagcttt atcacaaact 9360gtatatttta
aactgttagc gacgtccttg gccacgaacc ggacctgttg gtcgcgctct
9420agcacgtacc gcaggttgaa cgtatcttct ccaaatttaa attctccaat
tttaacgcga 9480gccattttga tacacgtgtg tcgattttgc aacaactatt
gttttttaac gcaaactaaa 9540cttattgtgg taagcaataa ttaaatatgg
gggaacatgc gccgctacaa cactcgtcgt 9600tatgaacgca gacggcgccg
gtctcggcgc aagcggctaa aacgtgttgc gcgttcaacg 9660cggcaaacat
cgcaaaagcc aatagtacag ttttgatttg catattaacg gcgatttttt
9720aaattatctt atttaataaa tagttatgac gcctacaact ccccgcccgc
gttgactcgc 9780tgcacctcga gcagttcgtt gacgccttcc tccgtgtggc
cgaacacgtc gagcgggtgg 9840tcgatgacca gcggcgtgcc gcacgcgacg
cacaagtatc tgtacaccga atgatcgtcg 9900ggcgaaggca cgtcggcctc
caagtggcaa tattggcaaa ttcgaaaata tatacagttg 9960ggttgtttgc
gcatatctat cgtggcgttg ggcatgtacg tccgaacgtt gatttgcatg
10020caagccgaaa ttaaatcatt gcgattagtg cgattaaaac gttgtacatc
ctcgctttta 10080atcatgccgt cgattaaatc gcgcaatcga gtcaagtgat
caaagtgtgg aataatgttt 10140tctttgtatt cccgagtcaa gcgcagcgcg
tattttaaca aactagccat cttgtaagtt 10200agtttcattt aatgcaactt
tatccaataa tatattatgt atcgcacgtc aagaattaac 10260aatgcgcccg
ttgtcgcatc tcaacacgac tatgatagag atcaaataaa gcgcgaatta
10320aatagcttgc gacgcaacgt gcacgatctg tgcacgcgtt ccggcacgag
ctttgattgt 10380aataagtttt tacgaagcga tgacatgacc cccgtagtga
caacgatcac gcccaaaaga 10440actgccgact acaaaattac cgagtatgtc
ggtgacgtta aaactattaa gccatccaat 10500cgaccgttag tcgaatcagg
accgctggtg cgagaagccg cgaagtatgg cgaatgcatc 10560gtataacgtg
tggagtccgc tcattagagc gtcatgttta gacaagaaag ctacatattt
10620aattgatccc gatgatttta ttgataaatt gaccctaact ccatacacgg
tattctacaa 10680tggcggggtt ttggtcaaaa tttccggact gcgattgtac
atgctgttaa cggctccgcc 10740cactattaat gaaattaaaa attccaattt
taaaaaacgc agcaagagaa acatttgtat 10800gaaagaatgc gtagaaggaa
agaaaaatgt cgtcgacatg ctgaacaaca agattaatat 10860gcctccgtgt
ataaaaaaaa tattgaacga tttgaaagaa aacaatgtac cgcgcggcgg
10920tatgtacagg aagaggttta tactaaactg ttacattgca aacgtggttt
cgtgtgccaa 10980gtgtgaaaac cgatgtttaa tcaaggctct gacgcatttc
tacaaccacg actccaagtg 11040tgtgggtgaa gtcatgcatc ttttaatcaa
atcccaagat gtgtataaac caccaaactg 11100ccaaaaaatg aaaactgtcg
acaagctctg tccgtttgct ggcaactgca agggtctcaa 11160tcctatttgt
aattattgaa taataaaaca attataaatg ctaaatttgt tttttattaa
11220cgatacaaac caaacgcaac aagaacattt gtagtattat ctataattga
aaacgcgtag 11280ttataatcgc tgaggtaata tttaaaatca ttttcaaatg
attcacagtt aatttgcgac 11340aatataattt tattttcaca taaactagac
gccttgtcgt cttcttcttc gtattccttc 11400tctttttcat ttttctcctc
ataaaaatta acatagttat tatcgtatcc atatatgtat 11460ctatcgtata
gagtaaattt tttgttgtca taaatatata tgtctttttt aatggggtgt
11520atagtaccgc tgcgcatagt ttttctgtaa tttacaacag tgctattttc
tggtagttct 11580tcggagtgtg ttgctttaat tattaaattt atataatcaa
tgaatttggg atcgtcggtt 11640ttgtacaata tgttgccggc atagtacgca
gcttcttcta gttcaattac accatttttt 11700agcagcaccg gattaacata
actttccaaa atgttgtacg aaccgttaaa caaaaacagt 11760tcacctccct
tttctatact attgtctgcg agcagttgtt tgttgttaaa aataacagcc
11820attgtaatga gacgcacaaa ctaatatcac aaactggaaa tgtctatcaa
tatatagttg 11880ctgatatctc cccagcatgc ctgctattgt cttcccaatc
ctcccccttg ctgtcctgcc 11940ccaccccacc ccccagaata gaatgacacc
tactcagaca atgcgatgca atttcctcat 12000tttattagga aaggacagtg
ggagtggcac cttccagggt caaggaaggc acgggggagg 12060ggcaaacaac
agatggctgg caactagaag gcacagtcga ggcgaattct tagcactcgc
12120cgcggttgaa ggacttggtc accgggctcg acaggccctg gtgggtcacc
tcgcaggcgt 12180acaccttgtg cttctcgtaa tcggccttgg acagggtcag
ggtggagctc agcgagtagg 12240tgctatcctt ggaatcctgc tcggtcacgc
tctcctggga gttgccggac tgcagggcgt 12300tatccacctt ccactgcacc
ttggcctcgc gggggtagaa gttgttcagc aggcacacca 12360cggaggcggt
gccggacttc agctgctcgt ccgacggcgg gaagatgaac acggaggggg
12420cggccacggt gcgcttgatc tccagcttgg tgccgccgcc gaaggtcggg
gggttgctgg 12480tccactgctg gcagtagtag gtggcggcat cctcggcctc
cacgcgggag atggtcaggc 12540tgtaggaggt gccgctgccg ctgccggaga
agcgcaccgg cacgccggag gccagattgg 12600aggtggcgta gatccagggc
ttcggggagc tgcctggctt ctgctggaac cagtgaatgt 12660agctcacgct
ggaggaggcg cggcaggtca tggtcacctt ctcgcccggc gaggcgctca
12720ggatggcggg gctctgcgac agcacgatct ggccgcggct catgatcacg
gaggcgctga 12780tcagcaggaa ggagatgatc tgcacctgga aa
12812431DNAArtificial Sequenceprimer 4gtttaaacgc ctcgactgtg
ccttctagtt g 31526DNAArtificial Sequenceprimer 5actagttccc
cagcatgcct gctatt 26634DNAArtificial Sequenceprimer 6aatggatccg
gtaccaccat ggtgagcaag ggcg 34736DNAArtificial Sequenceprimer
7ggcacttcgc gattacttgt acagctcgtc catgcc 36833DNAArtificial
Sequenceprimer 8ttatctcgcg aaccatgact caacgcttgt tcg
33926DNAArtificial Sequenceprimer 9atcacggaat gcctcgggta cgtatg
261026DNAArtificial Sequenceprimer 10gctggtcaaa catacgtacc cgaggc
261134DNAArtificial Sequenceprimer 11tgggccctta ctcctctcta
acacgagatt ccca 341235DNAArtificial Sequenceprimer 12attgtgaatt
cgcctcgact gtgccttcta gttgc 351332DNAArtificial Sequenceprimer
13taattgatat ctccccagca tgcctgctat tg 321451DNAArtificial
Sequenceprimer 14gccgcgctag catcatggag ataattaaaa tgataaccat
ctcgcaaata a 511532DNAArtificial Sequenceprimer 15aatttgcggc
cgcagcgccc gatggtggga cg 321650DNAArtificial Sequenceprimer
16gggcctcgag atcatggaga taattaaaat gataaccatc tcgcaaataa
501737DNAArtificial Sequenceprimer 17atttgcatgc gtttaaacag
cgcccgatgg tgggacg 371832DNAArtificial Sequenceprimer 18gccgcgctag
caaattccgt tttgcgacga tg 321951DNAArtificial Sequenceprimer
19aatttgcggc cgcgtttaaa ttgtgtaatt tatgtagctg taatttttac c
512031DNAArtificial Sequenceprimer 20gggcctcgag aaattccgtt
ttgcgacgat g 312156DNAArtificial Sequenceprimer 21atttgcatgc
gtttaaacgt ttaaattgtg taatttatgt agctgtaatt tttacc
562229DNAArtificial Sequenceprimer 22atttgtattt aatcaatcga
accgtgcac 292330DNAArtificial Sequenceprimer 23gattgggaat
ctcgtgttag agaggagtaa 302424DNAArtificial Sequenceprimer
24atcttcttca aggacgacgg caac 242534DNAArtificial Sequenceprimer
25agcaagatgg taagcgctat tgttttatat gtgc 342630DNAArtificial
Sequenceprimer 26agatgggtat gaaaccatac aacaagtgtg
302728DNAArtificial Sequenceprimer 27cgctaccata atctttgttg aatcgatg
28
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