U.S. patent application number 14/210238 was filed with the patent office on 2014-12-18 for compounds and methods for the treatment of cystic fibrosis.
This patent application is currently assigned to FLATLEY DISCOVERY LAB. The applicant listed for this patent is FLATLEY DISCOVERY LAB. Invention is credited to Yevgen Barsukov, Bridget M. Cole, Richard A. Nugent, Michael P. Zawistoski.
Application Number | 20140371238 14/210238 |
Document ID | / |
Family ID | 51625435 |
Filed Date | 2014-12-18 |
United States Patent
Application |
20140371238 |
Kind Code |
A1 |
Zawistoski; Michael P. ; et
al. |
December 18, 2014 |
COMPOUNDS AND METHODS FOR THE TREATMENT OF CYSTIC FIBROSIS
Abstract
The invention relates to a compound of Formula I and methods of
treating cystic fibrosis comprising the step of administering a
therapeutically effective amount of a compound of Formula I or IA
to a patient in need thereof: ##STR00001##
Inventors: |
Zawistoski; Michael P.;
(West Warwick, RI) ; Barsukov; Yevgen; (Brookline,
MA) ; Cole; Bridget M.; (Quincy, MA) ; Nugent;
Richard A.; (Ashland, MA) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
FLATLEY DISCOVERY LAB |
Charlestown |
MA |
US |
|
|
Assignee: |
FLATLEY DISCOVERY LAB
Charlestown
MA
|
Family ID: |
51625435 |
Appl. No.: |
14/210238 |
Filed: |
March 13, 2014 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
|
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61778883 |
Mar 13, 2013 |
|
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Current U.S.
Class: |
514/255.05 ;
514/256; 514/303; 514/318; 514/321; 514/326; 514/329; 544/327;
544/333; 544/405; 546/118; 546/194; 546/198; 546/209; 546/224 |
Current CPC
Class: |
A61K 31/4245 20130101;
A61K 31/443 20130101; A61K 45/06 20130101; A61K 31/497 20130101;
A61K 31/4725 20130101; A61P 43/00 20180101; A61K 31/4468 20130101;
A61K 31/4545 20130101; A61K 31/4468 20130101; A61K 31/4525
20130101; A61K 31/7036 20130101; C07D 413/12 20130101; A61K 31/506
20130101; A61K 31/454 20130101; C07D 211/96 20130101; A61K 31/4545
20130101; C07D 405/14 20130101; A61K 31/506 20130101; A61K 31/4725
20130101; C07D 417/12 20130101; A61K 31/497 20130101; A61K 2300/00
20130101; A61K 31/443 20130101; A61K 2300/00 20130101; A61K 2300/00
20130101; A61K 2300/00 20130101; A61K 2300/00 20130101; A61K
2300/00 20130101; A61K 2300/00 20130101; A61K 2300/00 20130101;
A61K 2300/00 20130101; A61K 31/4525 20130101; A61K 31/7036
20130101; C07D 401/14 20130101; A61K 31/4245 20130101; C07D 401/12
20130101; A61K 31/454 20130101; C07D 471/04 20130101; A61K 31/437
20130101; A61K 2300/00 20130101 |
Class at
Publication: |
514/255.05 ;
546/118; 514/303; 546/194; 514/318; 546/224; 514/329; 546/198;
514/321; 544/333; 514/256; 546/209; 514/326; 544/405; 544/327 |
International
Class: |
C07D 211/96 20060101
C07D211/96; A61K 31/437 20060101 A61K031/437; A61K 45/06 20060101
A61K045/06; C07D 401/12 20060101 C07D401/12; A61K 31/4545 20060101
A61K031/4545; A61K 31/497 20060101 A61K031/497; C07D 413/12
20060101 C07D413/12; A61K 31/454 20060101 A61K031/454; A61K 31/506
20060101 A61K031/506; C07D 405/14 20060101 C07D405/14; C07D 401/14
20060101 C07D401/14; C07D 417/12 20060101 C07D417/12; C07D 471/04
20060101 C07D471/04; A61K 31/4468 20060101 A61K031/4468 |
Claims
1. A compound of Formula I or an ester or prodrug thereof:
##STR00591## wherein n is 0, 1, 2, 3, 4, 5, 6 or 7; each X is
independently selected from --CR.sub.100, --N--, --COR.sub.100,
--CN(R.sub.100)(R.sub.101), --CSR.sub.100--C--C(O)NR.sub.100, and
--CN(R.sub.100)C(O)R.sub.101; A.sub.1 is absent,
--[C(R.sub.100)(R.sub.101)]-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101),
--N[C(R.sub.100)(R.sub.101)].sub.m--, --N(R.sub.100)C(O)--,
--N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); wherein m is 0, 1,
2, 3, 4, 5, 6 or 7; wherein each R.sub.100 and R.sub.101 is
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl and substituted aryl,
heterocycle, substituted heterocycle, heteroaryl or substituted
heteroaryl; alternatively two of R.sub.100 and R.sub.101 groups
together with the atoms to which they are attached and any
intervening atoms may form an additional optionally substituted, 3,
4, 5, 6 or 7 membered ring; A.sub.2 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101); each R.sub.1 is independently
selected from hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl,
substituted aryl, heterocyclyl, substituted heterocyclyl,
heteroaryl, or substituted heteroaryl --OR.sub.100, --SR.sub.100,
--S(O)--, S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101),
--NR.sub.100R.sub.101, --C(O)R.sub.100, --C(O)OR.sub.100,
--C(O)NR.sub.100R.sub.101, --N(R.sub.100)C(O)R.sub.101, --CF.sub.3,
--CN, --NO.sub.2, --N.sub.3, acyl, alkoxy, substituted alkoxy,
alkylamino, substituted alkylamino, dialkylamino, substituted
dialkylamino, alkylthio or substituted alkylthio; alternatively two
of R.sub.1 groups together with the atoms to which they are
attached and any intervening atoms may form an additional
optionally substituted 3, 4, 5, 6 or 7 membered ring; Cy.sub.1 is
absent, alkyl, cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl; wherein
when Cy.sub.1 is phenyl and A.sub.1 is absent or C.sub.1-C.sub.4
alkyl, the phenyl group is substituted with a group selected from
halogen, alkenyl, substituted alkenyl, alkynyl, substituted
alkynyl, aryl, substituted aryl, heterocyclyl, substituted
heterocyclyl, heteroaryl, or substituted heteroaryl --OR.sub.100,
--SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101) --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; wherein when Cy.sub.1 is
cyclobutyl, cyclopentyl or furan, Cy.sub.2 is substituted with a
group other than --OCF.sub.3, --CF.sub.3, --OCH.sub.3, --Cl or --F;
and, Cy.sub.2 is alkyl, cycloalkyl, substituted cycloalkyl aryl,
substituted aryl, heteroaryl or substituted heteroaryl.
2. A compound of Formula IA or an ester or prodrug thereof:
##STR00592## wherein n is 0, 1, 2, 3, 4, 5, 6 or 7; each X is
independently selected from each X is independently selected from
--CR.sub.100--, --N--, --COR.sub.100, --CN(R.sub.100)(R.sub.101),
--CSR.sub.100, --C--C(O)NR.sub.100, and
--CN(R.sub.100)C(O)R.sub.101; A.sub.1 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101),
--N[C(R.sub.100)(R.sub.101)].sub.m--, --N(R.sub.100)C(O)--,
--N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); wherein m is 0, 1,
2, 3, 4, 5, 6 or 7; wherein each R.sub.100 and R.sub.101 is
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl and substituted aryl,
heterocyclyl, substituted heterocyclyl, heteroaryl or substituted
heteroaryl; alternatively two of R.sub.100 and R.sub.101 groups
together with the atoms to which they are attached and any
intervening atoms may form an additional optionally substituted, 3,
4, 5, 6 or 7 membered ring; A.sub.2 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101); each R.sub.1 is independently
selected from hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl,
substituted aryl, heterocyclyl, substituted heterocyclyl,
heteroaryl, or substituted heteroaryl --OR.sub.100, --SR.sub.100,
--S(O)--, --S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101)
--NR.sub.100R.sub.101, --C(O)R.sub.100, --C(O)OR.sub.100,
--C(O)NR.sub.100R.sub.101, --N(R.sub.100)C(O)R.sub.101, --CF.sub.3,
--CN, --NO.sub.2, --N.sub.3, acyl, alkoxy, substituted alkoxy,
alkylamino, substituted alkylamino, dialkylamino, substituted
dialkylamino, alkylthio or substituted alkylthio; alternatively two
of R.sub.1 groups together with the atoms to which they are
attached and any intervening atoms may form an additional
optionally substituted 3, 4, 5, 6 or 7 membered ring; Cy.sub.1 is
absent, alkyl, cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl; Cy.sub.2 is
alkyl, cycloalkyl, substituted cycloalkyl aryl, substituted aryl,
heteroaryl or substituted heteroaryl.
3. A compound of claim 1 having the Formula II or HA:
##STR00593##
4. A compound of claim 1 having the formula: ##STR00594## wherein p
is 0, 1, 2 or 3; each R.sub.2 is independently selected from
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocyclyl, substituted heterocyclyl, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; and, R.sub.3 is selected from
halogen, deuterium, alkyl, substituted alkyl, cycloalkyl, alkenyl,
substituted alkenyl, alkynyl, substituted alkynyl, aliphatic,
substituted aliphatic, aryl, substituted aryl, heterocyclyl,
substituted heterocyclyl, heteroaryl, or substituted heteroaryl
--OR.sub.100, --SR.sub.100, --S(O)--, --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively, two of R.sub.2
groups or an R.sub.2 group with an R.sub.3 group together with the
atoms to which they are attached and any intervening atoms may form
an additional optionally substituted 3, 4, 5, 6 or 7 membered
ring.
5. A compound of claim 1 having the formula: ##STR00595## wherein q
is 0, 1, 2 or 3; each R.sub.4 is independently selected from
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocyclyl, substituted heterocyclyl, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; and, R.sub.5 is selected from
hydrogen, deuterium, halogen, alkyl, substituted alkyl, cycloalkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocyclyl, substituted heterocyclyl, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively, two of R.sub.4
groups or an R.sub.4 group with an R.sub.5 group together with the
atoms to which they are attached and any intervening atoms may form
an additional optionally substituted 3, 4, 5, 6 or 7 membered
ring.
6. A compound of claim 1 having the formula: ##STR00596##
7. A compound according to claim 1, wherein Cy.sub.1 is selected
from: ##STR00597## wherein w is 0, 1, 2, 3 or 4; each R.sub.104 and
R.sub.105 is independently selected from hydrogen, deuterium,
halogen, alkyl, cycloalkyl, substituted alkyl, alkenyl, substituted
alkenyl, alkynyl, substituted alkynyl, aliphatic, substituted
aliphatic, aryl, substituted aryl, heterocycle, substituted
heterocycle, heteroaryl, or substituted heteroaryl --OR.sub.100,
--SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively, two of R.sub.104
groups or an R.sub.104 group with an R.sub.105 group together with
the atoms to which they are attached and any intervening atoms may
form an additional optionally substituted 3, 4, 5, 6 or 7 membered
ring, preferably a cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl group.
8. A compound according to claim 1, wherein Cy.sub.2 is selected
from: ##STR00598## wherein w is 0, 1, 2, 3 or 4; each R.sub.104 and
R.sub.105 is independently selected from hydrogen, deuterium,
halogen, alkyl, cycloalkyl, substituted alkyl, alkenyl, substituted
alkenyl, alkynyl, substituted alkynyl, aliphatic, substituted
aliphatic, aryl, substituted aryl, heterocyclyl, substituted
heterocyclyl, heteroaryl, or substituted heteroaryl --OR.sub.100,
--SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively, two of R.sub.104
groups or an R.sub.104 group with an R.sub.105 group together with
the atoms to which they are attached and any intervening atoms may
form an additional optionally substituted 3, 4, 5, 6 or 7 membered
ring.
9. A compound selected from Table 4: TABLE-US-00005 TABLE 4
##STR00599## ##STR00600## ##STR00601## ##STR00602## ##STR00603##
##STR00604## ##STR00605## ##STR00606## ##STR00607## ##STR00608##
##STR00609## ##STR00610## ##STR00611## ##STR00612## ##STR00613##
##STR00614## ##STR00615## ##STR00616## ##STR00617## ##STR00618##
##STR00619## ##STR00620## ##STR00621## ##STR00622## ##STR00623##
##STR00624## ##STR00625## ##STR00626## ##STR00627## ##STR00628##
##STR00629## ##STR00630## ##STR00631## ##STR00632## ##STR00633##
##STR00634## ##STR00635## ##STR00636## ##STR00637## ##STR00638##
##STR00639## ##STR00640## ##STR00641## ##STR00642## ##STR00643##
##STR00644## ##STR00645## ##STR00646## ##STR00647## ##STR00648##
##STR00649## ##STR00650## ##STR00651## ##STR00652## ##STR00653##
##STR00654## ##STR00655## ##STR00656## ##STR00657## ##STR00658##
##STR00659## ##STR00660## ##STR00661## ##STR00662## ##STR00663##
##STR00664## ##STR00665## ##STR00666## ##STR00667## ##STR00668##
##STR00669## ##STR00670## ##STR00671## ##STR00672## ##STR00673##
##STR00674## ##STR00675## ##STR00676## ##STR00677## ##STR00678##
##STR00679## ##STR00680## ##STR00681## ##STR00682## ##STR00683##
##STR00684## ##STR00685## ##STR00686## ##STR00687## ##STR00688##
##STR00689## ##STR00690## ##STR00691## ##STR00692## ##STR00693##
##STR00694## ##STR00695## ##STR00696## ##STR00697## ##STR00698##
##STR00699## ##STR00700## ##STR00701## ##STR00702## ##STR00703##
##STR00704## ##STR00705## ##STR00706## ##STR00707## ##STR00708##
##STR00709## ##STR00710## ##STR00711## ##STR00712## ##STR00713##
##STR00714## ##STR00715## ##STR00716## ##STR00717## ##STR00718##
##STR00719## ##STR00720## ##STR00721## ##STR00722##
##STR00723## ##STR00724## ##STR00725## ##STR00726## ##STR00727##
##STR00728## ##STR00729## ##STR00730## ##STR00731## ##STR00732##
##STR00733## ##STR00734## ##STR00735## ##STR00736## ##STR00737##
##STR00738## ##STR00739## ##STR00740## ##STR00741## ##STR00742##
##STR00743## ##STR00744## ##STR00745## ##STR00746## ##STR00747##
##STR00748## ##STR00749## ##STR00750## ##STR00751## ##STR00752##
##STR00753## ##STR00754## ##STR00755## ##STR00756## ##STR00757##
##STR00758## ##STR00759## ##STR00760## ##STR00761## ##STR00762##
##STR00763## ##STR00764## ##STR00765## ##STR00766## ##STR00767##
##STR00768## ##STR00769## ##STR00770## ##STR00771## ##STR00772##
##STR00773## ##STR00774## ##STR00775## ##STR00776## ##STR00777##
##STR00778## ##STR00779## ##STR00780## ##STR00781## ##STR00782##
##STR00783## ##STR00784## ##STR00785## ##STR00786## ##STR00787##
##STR00788## ##STR00789## ##STR00790## ##STR00791## ##STR00792##
##STR00793## ##STR00794## ##STR00795## ##STR00796## ##STR00797##
##STR00798## ##STR00799## ##STR00800## ##STR00801## ##STR00802##
##STR00803## ##STR00804## ##STR00805## ##STR00806## ##STR00807##
##STR00808## ##STR00809## ##STR00810## ##STR00811## ##STR00812##
##STR00813## ##STR00814## ##STR00815## ##STR00816## ##STR00817##
##STR00818## ##STR00819## ##STR00820## ##STR00821## ##STR00822##
##STR00823## ##STR00824## ##STR00825## ##STR00826## ##STR00827##
##STR00828## ##STR00829## ##STR00830## ##STR00831## ##STR00832##
##STR00833## ##STR00834## ##STR00835## ##STR00836## ##STR00837##
##STR00838## ##STR00839## ##STR00840## ##STR00841## ##STR00842##
##STR00843## ##STR00844## ##STR00845## ##STR00846##
##STR00847##
10. A pharmaceutical composition comprising a compound according to
claim 1 and a carrier.
11. A method of treating a disease or disorder mediated by cystic
fibrosis transmembrane conductance regulator (CFTR) comprising the
step of administering a therapeutically effective amount of a
compound of Formula I or IA to a patient in need thereof:
##STR00848## wherein n is 0, 1, 2, 3, 4, 5, 6 or 7; each X is
independently selected from each X is independently selected from
--CR.sub.100-5-N--, --COR.sub.100, --CN(R.sub.100)(R.sub.101),
--CSR.sub.100, --C--C(O)NR.sub.100, and
--CN(R.sub.100)C(O)R.sub.101; A.sub.1 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101),
--N[C(R.sub.100)(R.sub.101)].sub.m--, --N(R.sub.100)C(O)--,
--N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); wherein m is 0, 1,
2, 3, 4, 5, 6 or 7; wherein each R.sub.100 and R.sub.101 is
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl and substituted aryl,
heterocyclyl, substituted heterocyclyl, heteroaryl or substituted
heteroaryl; alternatively two of R.sub.100 and R.sub.101 groups
together with the atoms to which they are attached and any
intervening atoms may form an additional optionally substituted, 3,
4, 5, 6 or 7 membered ring; A.sub.2 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101); each R.sub.1 is independently
selected from hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl,
substituted aryl, heterocyclyl, substituted heterocyclyl,
heteroaryl, or substituted heteroaryl --OR.sub.100, --SR.sub.100,
--S(O)--, S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101),
--NR.sub.100R.sub.101, --C(O)R.sub.100, --C(O)OR.sub.100,
--C(O)NR.sub.100R.sub.101, --N(R.sub.100)C(O)R.sub.101, --CF.sub.3,
--CN, --NO.sub.2, --N.sub.3, acyl, alkoxy, substituted alkoxy,
alkylamino, substituted alkylamino, dialkylamino, substituted
dialkylamino, alkylthio or substituted alkylthio; alternatively two
of R.sub.1 groups together with the atoms to which they are
attached and any intervening atoms may form an additional
optionally substituted 3, 4, 5, 6 or 7 membered ring; Cy.sub.1 is
absent, alkyl, cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl; Cy.sub.2 is
alkyl, cycloalkyl, substituted cycloalkyl aryl, substituted aryl,
heteroaryl or substituted heteroaryl.
12. A method of treating a disease or disorder mediated by the
cystic fibrosis transmembrane conductance regulator (CFTR)
comprising the step of administering a therapeutically effective
amount of a compound according to claim 1 to a patient in need
thereof.
13. A method for treating a condition, disease or disorder
modulated by ABC transporter protein comprising the step of
administering a compound according to claim 1 to a patient in need
thereof.
14. The method according to claim 13, wherein said condition,
disease or disorder is selected from cystic fibrosis, Stargardt
disease, age-related macular degeneration, adrenoleukodystrophy,
Tangier disease, Dubin-Johnson syndrome and progressive familial
intrahepatic cholestasis.
15. The method according to claim 12, wherein said disease or
disorder is selected from cystic fibrosis, hereditary emphysema,
hereditary hemochromatosis, coagulation-fibrinolysis deficiencies,
type 1 hereditary angioedema, lipid processing deficiencies, such
as familial hypercholesterolemia, type 1 chylomicronemia,
abetalipoproteinemia, lysosomal storage diseases, such as I-cell
disease/pseudo-Hurler, mucopolysaccharidoses, Sandhof/Tay-Sachs,
Crigler-Najjar type II, polyendocrinopathy/hyperinsulemia, diabetes
mellitus, Laron dwarfism, myeloperoxidase deficiency, primary
hypoparathyroidism, melanoma, glycanosis CDG type 1, hereditary
emphysema, congenital hyperthyroidism, osteogenesis imperfecta,
hereditary hypofibrinogenemia, ACT deficiency, diabetes insipidus
(DI), neurophyseal DI, neprogenic DI, Charcot-Marie tooth syndrome,
Perlizaeus-Merzbacher disease, neurodegenerative diseases such as
Alzheimer's disease, Parkinson's disease, amyotrophic lateral
sclerosis, progressive supranuclear palsy, Pick's disease, several
polyglutamine neurological disorders such as Huntington's disease,
Spinocerebullar ataxia type I, Spinal and bulbar muscular atrophy,
Dentororubal pallidoluysian, and Myotic dystrophy, as well as,
spongiform encephalopathies such as Hereditary Creutzfeldt-Jakob
disease, Fabry disease, Straussler-Scheinker disease, secretory
diarrhea, polycystic kidney disease, chronic obstructive pulmonary
disease (COPD), dry eye disease, or Sjogren's Syndrome.
16. A method for treating cystic fibrosis or a symptom thereof,
comprising the step of administering to a subject in need thereof a
therapeutically effective amount of a compound according to claim
1.
17. A method for treating a condition, disease or disorder mediated
by the CFTR gene comprising the step of administering a compound
according to claim 1 to a subject in need thereof.
18. A method for treating a condition, disease or disorder mediated
by a mutation to CFTR gene selected form deltaF08, G542X,
N.sub.13O.sub.3K, W1282X, R117H, R553X, D1152H, W1282X, R347P,
R1070Q, splice mutations 1717-1G->A, 2789+5G->A, and
621+1G->T comprising the step of administering a compound
according to claim 1 to a subject in need thereof.
19. The method according to claim 12, wherein said compound is
selected from claim Table 4.
20. A composition comprising a compound according to claim 1 or a
combination thereof, in combination with a compound selected from
Gentamicin, Ataluren, Ivacaftor (Kalydeco) and VX-809 or a
combination thereof.
21. A composition according to claim 1 administered optionally in
combination with a mucolytic, a bronchiodilator, an antibiotic, an
anti-infective, an anti-inflammatory, a CFTR modulator, or a
nutritional agent.
Description
RELATED APPLICATIONS
[0001] This application claims the benefit of U.S. Provisional
Application No. 61/778,883, filed on Mar. 13, 2013. The entire
teachings of the above applications are incorporated herein by
reference.
BACKGROUND
[0002] Cystic fibrosis (CF) is a lethal, recessive, genetic disease
affecting approximately 1 in 2500 live births among Caucasians.
(Cohen-Cymberknoh M, Shoseyov D, Kerem E. Managing cystic fibrosis:
strategies that increase life expectancy and improve quality of
life. Am J Respir Crit. Care Med (2011); 183: 1463-1471; Boat T F,
Welsh M J and Beaudet A L. Cystic fibrosis. (1989) IN "The
Metabolic Basis of Inherited Disease" (C L Scriver, A L Beaudet, W
S Sly and D Valee, eds.), 6.sup.th Ed., pp. 2649-2680. McGraw-Hill,
New York). Approximately 1 in 25 persons are carriers of the
genetic defect associated with the disease. The major symptoms of
cystic fibrosis include chronic pulmonary disease, pancreatic
exocrine insufficiency, infertility in males, and elevated sweat
electrolyte levels. The symptoms are consistent with cystic
fibrosis being an exocrine disorder. (Hantash F: U.S. Patent
Application No. 20060057593. Method for detecting cystic fibrosis.
(2004). Published Mar. 16, 2006).
[0003] The CF gene codes for a cAMP/PKA-dependent, ATP-requiring,
membrane-bound chloride ion channel known as CFTR (cystic fibrosis
transmembrane conductance regulator), and is generally localized to
the apical membranes of many secreting epithelia There are
currently over 1700 known mutations affecting CFTR, many of which
give rise to a disease phenotype. Around 75% of CF alleles contain
the .DELTA.F508 mutation in which a triplet codon has been lost,
leading to a missing phenylalanine at position 508 in the protein.
This altered protein fails to be trafficked to the correct location
in the cell and is generally destroyed by the proteasome. The small
amount that does reach the correct location functions poorly.
(Cutbert A W. New horizons in the treatment of cystic fibrosis.
British J Pharm, (2011), 163: 173-183).
[0004] Although CFTR functions mainly as a chloride channel, it has
many other roles, including inhibition of sodium transport through
the epithelial sodium channel, regulation of the outwardly
rectifying chloride channel, ATP channels, intracellular vesicle
transport, and inhibition of endogenous calcium-activated chloride
channels. CFTR is also involved in bicarbonate-chloride exchange. A
deficiency in bicarbonate secretion leads to poor solubility and
aggregation of luminal mucins. Obstruction of intrapancreatic ducts
with thickened secretions causes autolysis of pancreatic tissue
with replacement of the body of the pancreas with fat, leading to
pancreatic insufficiency with subsequent malnutrition. In the
lungs, CFTR dysfunction leads to airway surface liquid (ASL)
depletion and thickened and viscous mucus that adheres to airway
surfaces. The result is decreased mucociliary clearance (MCC) and
impaired host defenses. Dehydrated, thickened secretions lead to
endobronchial infection with a limited spectrum of distinctive
bacteria, mainly Staphylococcus aureus and Pseudomonas aeruginosa,
Deficiency in bicarbonate secretion due to loss of CFTR function
also results in a lower pH at the airway surface which impairs
anti-bacterial killing activity and increases susceptibility to
infection. An exaggerated inflammatory response in response to
chronic lung infections leads to the development of bronchiectasis
and progressive obstructive airways disease. Pulmonary
insufficiency is responsible for most CF-related deaths.
(Cohen-Cymberknoh M, Shoseyov D, Kerem E. Managing cystic fibrosis:
strategies that increase life expectancy and improve quality of
life. Am J Respir Crit. Care Med (2011); 183: 1463-1471).
[0005] The prognosis for the treatment of CF has improved over the
last 40 years. This was achieved by improving pancreatic enzyme
supplements, drugs designed to treat pulmonary infection, reduce
inflammation and enhance mucociliary clearance. Currently the
therapeutic challenges are to correct the biochemical defect of CF
and to identify effective treatments for chronic respiratory
infection. (Frerichs C, Smyth A. Treatment strategies for cystic
fibrosis: what's in the pipeline? Pharmacotherapy (2009), 10:
1191-1202).
SUMMARY
[0006] The invention relates to a compound of Formula I and methods
of treating CFTR (cystic fibrosis transmembrane conductance
regulator) mediated diseases, in particular cystic fibrosis,
comprising the step of administering a therapeutically effective
amount of a compound of Formula I or IA to a patient in need
thereof:
##STR00002##
Wherein n is 0, 1, 2, 3, 4, 5, 6 or 7;
[0007] Each X is independently selected from --CR.sub.100-- or
--N--; A.sub.1 is absent, --[C(R.sub.100)(R.sub.101)].sub.m--
--C(O)--, --C(S)--, --S(O)--, --C(O)N(R.sub.100)--,
--S(O).sub.2N(R.sub.100)(R.sub.101) or
--S(O).sub.2--N[C(R.sub.100)(R.sub.101)].sub.m--,
--N(R.sub.100)C(O)--, --N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); [0008] Wherein m
is 0, 1, 2, 3, 4, 5, 6 or 7; [0009] Wherein each R.sub.100 and
R.sub.101 is hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl and
substituted aryl, heterocycle, substituted heterocycle, heteroaryl
or substituted heteroaryl; alternatively two of R.sub.100 and
R.sub.101 groups together with the atoms to which they are attached
and any intervening atoms may form an additional optionally
substituted, 3, 4, 5, 6 or 7 membered ring; A.sub.2 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)--, --S(O).sub.2N(R.sub.100)(R.sub.101) or
--S(O).sub.2--; Each R.sub.1 is independently selected from
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocycle, substituted heterocycle, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101) --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively two of R.sub.1
groups together with the atoms to which they are attached and any
intervening atoms may form an additional optionally substituted 3,
4, 5, 6 or 7 membered ring; Cy.sub.1 is absent, alkyl, cycloalkyl,
substituted cycloalkyl, aryl, substituted aryl, heteroaryl or
substituted heteroaryl; Cy.sub.2 is alkyl, cycloalkyl, substituted
cycloalkyl, aryl, substituted aryl, heteroaryl or substituted
heteroaryl.
DETAILED DESCRIPTION OF THE INVENTION
[0010] The invention relates to a compound of Formula I and methods
of treating cystic fibrosis comprising the step of administering a
therapeutically effective amount of a compound of Formula I or IA
to a patient in need thereof:
##STR00003##
Wherein n is 0, 1, 2, 3, 4, 5, 6 or 7;
[0011] Each X is independently selected from --CR.sub.100-- or
--N--; A.sub.1 is absent, --[C(R.sub.100)(R.sub.101)].sub.m--
--C(O)--, --C(S)--, --S(O)--, --C(O)N(R.sub.100)-- or
--S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101),
--N[C(R.sub.100)(R.sub.101)].sub.m--, --N(R.sub.100)C(O)--,
--N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); [0012] Wherein m
is 0, 1, 2, 3, 4, 5, 6 or 7; [0013] Wherein each R.sub.100 and
R.sub.101 is hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl and
substituted aryl, heterocycle, substituted heterocycle, heteroaryl
or substituted heteroaryl; alternatively two of R.sub.100 and
R.sub.101 groups together with the atoms to which they are attached
and any intervening atoms may form an additional optionally
substituted, 3, 4, 5, 6 or 7 membered ring; A.sub.2 is absent,
--[C(R.sub.100)(R.sub.101)].sub.m-- --C(O)--, --C(S)--, --S(O)--,
--C(O)N(R.sub.100)-- or --S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101); Each R.sub.1 is independently
selected from hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl,
substituted aryl, heterocycle, substituted heterocycle, heteroaryl,
or substituted heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--,
S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101)
--NR.sub.100R.sub.101, --C(O)R.sub.100, --C(O)OR.sub.100,
--C(O)NR.sub.100R.sub.101, --N(R.sub.100)C(O)R.sub.101, --CF.sub.3,
--CN, --NO.sub.2, --N.sub.3, acyl, alkoxy, substituted alkoxy,
alkylamino, substituted alkylamino, dialkylamino, substituted
dialkylamino, alkylthio or substituted alkylthio; alternatively two
of R.sub.1 groups together with the atoms to which they are
attached and any intervening atoms may form an additional
optionally substituted 3, 4, 5, 6 or 7 membered ring; Cy.sub.1 is
absent, alkyl, cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl; Cy.sub.2 is
alkyl, cycloalkyl, substituted cycloalkyl aryl, substituted aryl,
heteroaryl or substituted heteroaryl. In a preferred embodiment,
the invention relates to a compound having the Formula II or
HA:
##STR00004##
[0013] Wherein n is 0, 1, 2, 3, 4, 5, 6 or 7;
[0014] Each X is independently selected from --CR.sub.100-- or
--N--; A.sub.1 is absent, --[C(R.sub.100)(R.sub.101)].sub.m--,
--C(O)--, --C(S)--, --S(O)--, --C(O)N(R.sub.100)-- or
--S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101)--,
--N[C(R.sub.100)(R.sub.101)].sub.m--, --N(R.sub.100)C(O)--,
--N(R.sub.100)C(S)--, --N(R.sub.100)S(O)--,
--N(R.sub.101)C(O)N(R.sub.100)-- or --N(R.sub.100)S(O).sub.2--,
--N(R.sub.100)S(O).sub.2N(R.sub.100)(R.sub.101); [0015] Wherein m
is 0, 1, 2, 3, 4, 5, 6 or 7; [0016] Wherein each R.sub.100 and
R.sub.101 is hydrogen, deuterium, halogen, alkyl, cycloalkyl,
substituted alkyl, alkenyl, substituted alkenyl, alkynyl,
substituted alkynyl, aliphatic, substituted aliphatic, aryl and
substituted aryl, heterocycle, substituted heterocycle, heteroaryl
or substituted heteroaryl; alternatively two of R.sub.100 and
R.sub.101 groups together with the atoms to which they are attached
and any intervening atoms may form an additional optionally
substituted, 3, 4, 5, 6 or 7 membered ring; Each R.sub.1 is
independently selected from hydrogen, deuterium, halogen, alkyl,
cycloalkyl, substituted alkyl, alkenyl, substituted alkenyl,
alkynyl, substituted alkynyl, aliphatic, substituted aliphatic,
aryl, substituted aryl, heterocycle, substituted heterocycle,
heteroaryl, or substituted heteroaryl --OR.sub.100, --SR.sub.100,
--S(O)--, S(O).sub.2--, --S(O).sub.2N(R.sub.100)(R.sub.101)
--NR.sub.100R.sub.101, --C(O)R.sub.100, --C(O)OR.sub.100,
--C(O)NR.sub.100R.sub.101, --N(R.sub.100)C(O)R.sub.101, --CF.sub.3,
--CN, --NO.sub.2, --N.sub.3, acyl, alkoxy, substituted alkoxy,
alkylamino, substituted alkylamino, dialkylamino, substituted
dialkylamino, alkylthio or substituted alkylthio; Alternatively two
of R.sub.1 groups together with the atoms to which they are
attached and any intervening atoms may form an additional
optionally substituted 3, 4, 5, 6 or 7 membered ring, preferably a
cycloalkyl, substituted cycloalkyl, aryl, substituted aryl,
heteroaryl or substituted heteroaryl group; Cy.sub.1 is absent,
cycloalkyl, substituted cycloalkyl, aryl, substituted aryl,
heteroaryl or substituted heteroaryl; Cy.sub.2 is aryl, substituted
aryl, heteroaryl or substituted heteroaryl. In one embodiment, the
--C(R.sub.100) from X and an R.sub.100 group from A.sub.1 together
with the atoms to which they are attached and any intervening atoms
form a C.sub.3-C.sub.7 fused or bridged ring; preferably a
C.sub.3-C.sub.7 heterocyclic or heteroaryl ring. In a preferred
embodiment, the invention relates to a compound having the Formula
III or IIIA:
##STR00005##
[0016] Wherein p is 0, 1, 2 or 3;
[0017] Each R.sub.2 is independently selected from hydrogen,
deuterium, halogen, alkyl, cycloalkyl, substituted alkyl, alkenyl,
substituted alkenyl, alkynyl, substituted alkynyl, aliphatic,
substituted aliphatic, aryl, substituted aryl, heterocycle,
substituted heterocycle, heteroaryl, or substituted heteroaryl
--OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; and, R.sub.3 is selected from
halogen, deuterium, alkyl, substituted alkyl, cycloalkyl, alkenyl,
substituted alkenyl, alkynyl, substituted alkynyl, aliphatic,
substituted aliphatic, aryl, substituted aryl, heterocycle,
substituted heterocycle, heteroaryl, or substituted heteroaryl
--OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively two of R.sub.2
groups or an R.sub.2 group with an R.sub.3 group together with the
atoms to which they are attached and any intervening atoms may form
an additional optionally substituted 3, 4, 5, 6 or 7 membered ring,
preferably a cycloalkyl, substituted cycloalkyl, aryl, substituted
aryl, heteroaryl or substituted heteroaryl group. In a preferred
embodiment, the invention relates to a compound having the Formula
IV or IVA:
##STR00006##
Wherein q is 0, 1, 2 or 3;
[0018] Each R.sub.4 is independently selected from hydrogen,
deuterium, halogen, alkyl, cycloalkyl, substituted alkyl, alkenyl,
substituted alkenyl, alkynyl, substituted alkynyl, aliphatic,
substituted aliphatic, aryl, substituted aryl, heterocycle,
substituted heterocycle, heteroaryl, or substituted heteroaryl
--OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; and, R.sub.5 is selected from
hydrogen, deuterium, halogen, alkyl, substituted alkyl, cycloalkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocycle, substituted heterocycle, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; alternatively two of R.sub.4
groups or an R.sub.4 group with an R.sub.5 group together with the
atoms to which they are attached and any intervening atoms may form
an additional optionally substituted 3, 4, 5, 6 or 7 membered ring,
preferably a cycloalkyl, substituted cycloalkyl, aryl, substituted
aryl, heteroaryl or substituted heteroaryl group. In a preferred
embodiment, the invention relates to a compound having the Formula
V or VA:
##STR00007##
In a preferred embodiment, Cy.sub.1 is selected from:
##STR00008##
Wherein w is 0, 1, 2, 3 or 4;
[0019] Each R.sub.104 and R.sub.105 is independently selected from
hydrogen, deuterium, halogen, alkyl, cycloalkyl, substituted alkyl,
alkenyl, substituted alkenyl, alkynyl, substituted alkynyl,
aliphatic, substituted aliphatic, aryl, substituted aryl,
heterocycle, substituted heterocycle, heteroaryl, or substituted
heteroaryl --OR.sub.100, --SR.sub.100, --S(O)--, S(O).sub.2--,
--S(O).sub.2N(R.sub.100)(R.sub.101), --NR.sub.100R.sub.101,
--C(O)R.sub.100, --C(O)OR.sub.100, --C(O)NR.sub.100R.sub.101,
--N(R.sub.100)C(O)R.sub.101, --CF.sub.3, --CN, --NO.sub.2,
--N.sub.3, acyl, alkoxy, substituted alkoxy, alkylamino,
substituted alkylamino, dialkylamino, substituted dialkylamino,
alkylthio or substituted alkylthio; Alternatively, two of R.sub.104
groups or an R.sub.104 group with an R.sub.105 group together with
the atoms to which they are attached and any intervening atoms may
form an additional optionally substituted 3, 4, 5, 6 or 7 membered
ring, preferably a cycloalkyl, substituted cycloalkyl, aryl,
substituted aryl, heteroaryl or substituted heteroaryl group. In a
preferred embodiment, Cy.sub.2 is selected from:
##STR00009##
In a more preferred embodiment, a compound of formula I is selected
from Table 1:
TABLE-US-00001 TABLE 1 ##STR00010## ##STR00011## ##STR00012##
##STR00013## ##STR00014## ##STR00015## ##STR00016## ##STR00017##
##STR00018## ##STR00019## ##STR00020## ##STR00021## ##STR00022##
##STR00023## ##STR00024## ##STR00025## ##STR00026## ##STR00027##
##STR00028## ##STR00029## ##STR00030## ##STR00031## ##STR00032##
##STR00033## ##STR00034## ##STR00035## ##STR00036## ##STR00037##
##STR00038## ##STR00039## ##STR00040## ##STR00041## ##STR00042##
##STR00043## ##STR00044## ##STR00045## ##STR00046## ##STR00047##
##STR00048## ##STR00049## ##STR00050## ##STR00051## ##STR00052##
##STR00053## ##STR00054## ##STR00055## ##STR00056## ##STR00057##
##STR00058## ##STR00059## ##STR00060## ##STR00061## ##STR00062##
##STR00063## ##STR00064## ##STR00065## ##STR00066## ##STR00067##
##STR00068## ##STR00069## ##STR00070## ##STR00071## ##STR00072##
##STR00073## ##STR00074## ##STR00075## ##STR00076## ##STR00077##
##STR00078## ##STR00079## ##STR00080## ##STR00081## ##STR00082##
##STR00083## ##STR00084## ##STR00085## ##STR00086## ##STR00087##
##STR00088## ##STR00089## ##STR00090## ##STR00091## ##STR00092##
##STR00093## ##STR00094## ##STR00095## ##STR00096## ##STR00097##
##STR00098## ##STR00099## ##STR00100## ##STR00101## ##STR00102##
##STR00103## ##STR00104## ##STR00105## ##STR00106## ##STR00107##
##STR00108## ##STR00109## ##STR00110## ##STR00111## ##STR00112##
##STR00113## ##STR00114## ##STR00115## ##STR00116## ##STR00117##
##STR00118## ##STR00119## ##STR00120## ##STR00121## ##STR00122##
##STR00123## ##STR00124## ##STR00125## ##STR00126## ##STR00127##
##STR00128## ##STR00129## ##STR00130## ##STR00131## ##STR00132##
##STR00133##
##STR00134## ##STR00135## ##STR00136## ##STR00137## ##STR00138##
##STR00139## ##STR00140## ##STR00141## ##STR00142## ##STR00143##
##STR00144## ##STR00145## ##STR00146## ##STR00147## ##STR00148##
##STR00149## ##STR00150## ##STR00151## ##STR00152## ##STR00153##
##STR00154## ##STR00155## ##STR00156## ##STR00157## ##STR00158##
##STR00159## ##STR00160## ##STR00161## ##STR00162## ##STR00163##
##STR00164## ##STR00165## ##STR00166## ##STR00167## ##STR00168##
##STR00169## ##STR00170## ##STR00171## ##STR00172## ##STR00173##
##STR00174## ##STR00175## ##STR00176## ##STR00177## ##STR00178##
##STR00179## ##STR00180## ##STR00181## ##STR00182## ##STR00183##
##STR00184## ##STR00185## ##STR00186## ##STR00187## ##STR00188##
##STR00189## ##STR00190## ##STR00191## ##STR00192## ##STR00193##
##STR00194## ##STR00195## ##STR00196## ##STR00197## ##STR00198##
##STR00199## ##STR00200## ##STR00201## ##STR00202## ##STR00203##
##STR00204## ##STR00205## ##STR00206## ##STR00207## ##STR00208##
##STR00209## ##STR00210## ##STR00211## ##STR00212## ##STR00213##
##STR00214## ##STR00215## ##STR00216## ##STR00217## ##STR00218##
##STR00219## ##STR00220## ##STR00221## ##STR00222## ##STR00223##
##STR00224## ##STR00225## ##STR00226## ##STR00227## ##STR00228##
##STR00229## ##STR00230## ##STR00231## ##STR00232## ##STR00233##
##STR00234## ##STR00235## ##STR00236## ##STR00237## ##STR00238##
##STR00239## ##STR00240## ##STR00241## ##STR00242## ##STR00243##
##STR00244## ##STR00245## ##STR00246## ##STR00247## ##STR00248##
##STR00249## ##STR00250## ##STR00251## ##STR00252## ##STR00253##
##STR00254## ##STR00255## ##STR00256## ##STR00257##
##STR00258##
[0020] General synthetic schemes to prepare compounds of the
invention:
##STR00259##
##STR00260##
##STR00261##
##STR00262##
##STR00263##
##STR00264##
##STR00265##
##STR00266##
##STR00267##
##STR00268##
##STR00269##
##STR00270##
##STR00271##
##STR00272## ##STR00273##
##STR00274##
##STR00275##
##STR00276##
##STR00277##
##STR00278##
[0021] Compounds of the invention are useful as modulators of CFTR
and treating diseases or disorders mediated by CFTR such as for the
treatment of disease, disorders or conditions such as Cystic
fibrosis, Hereditary emphysema, Hereditary hemochromatosis,
Coagulation-Fibrinolysis deficiencies such as Protein C deficiency,
Type 1 hereditary angioedema, Lipid processing deficiencies such as
Familial hypercholesterolemia, Type 1 chylomicronemia,
Abetalipoproteinemia, Lysosomal storage diseases such as I-cell
disease/Pseudo-Hurler, Mucopolysaccharidosis, Sandhof/Tay-Sachs,
Crigler-Najjar type II, Polyendocrinopathy/Hyperinsulemia, Diabetes
mellitus, Laron dwarfism, Myeloperoxidase deficiency, Primary
hypoparathyroidism, Melanoma, Glycanosis CDG type 1, Hereditary
emphysema, Congenital hyperthyroidism, Osteogenesis imperfecta,
Hereditary hypofibrinogenemia, ACT deficiency, Diabetes insipidus
(DI), Neurophyseal DI, Neprogenic DI, Charcot-Marie Tooth syndrome,
Perlizaeus-Merzbacher disease, neurodegenerative diseases such as
Alzheimer's disease, Parkinson's disease, Amyotrophic lateral
sclerosis, progressive supranuclear palsy, Pick's disease, several
polyglutamine neurological disorders such as Huntington's disease,
Spinocerebullar ataxia type I, Spinal and bulbar muscular atrophy,
Dentatorubal pallidoluysian, and Myotonic dystrophy, as well as
Spongiform encephalopathies, such as Hereditary Creutzfeldt-Jakob
disease (due to Prion protein processing defect), Fabry disease and
Straussler-Scheinker syndrome, secretory diarrhea, polycistic
kidney disease, chronic obstructive pulmonary disease (COPD), dry
eye disease or Sjogren's syndrome.
[0022] The compounds of the invention may be administered in
combination with antibiotics, anti-inflammatory medicines,
bronchodilators, or mucus-thinning medicines. In particular
antibiotics for the treatment of bacteria mucoid Pseudomonas may be
used in combination with compounds of the invention. Inhaled
antibiotics such as tobramycin, colistin, and aztreonam can be used
in combination with treatment with compounds of the invention.
Anti-inflammatory medicines may also be used in combination with
compounds of the invention to treat CFTR related diseases.
Bronchodilators can be used in combination with compounds of the
invention to treat CFTR related diseases. Mucolytics or mucus
thinning medicines can also be used in combination with the
invention. Examples include carbocisteine (trade name
MUCODYNE.RTM.), erdosteine (trade name ERDOTIN.RTM.) and mecysteine
(trade name VISCLAIR.RTM.). Another type of mucolytic that can be
used is dornase alfa (trade name PULMOZYME.RTM.). These drugs can
be used as inhaled or nebulized formulations, capsules, tablets or
oral liquids.
[0023] In one embodiment, the invention relates to combination
therapy comprising compounds of the invention and other
pharmaceutical agents useful for the treatment of CF. In a
preferred embodiment, the aminoglycoside gentamicin can be used. In
a preferred embodiment, ataluren, Ivacaftor (Kalydeco) or VX-809
may be used in combination with compounds of the invention.
[0024] In one embodiment, the invention relates to pharmaceutical
compositions comprising compounds of the invention and
pharmaceutically acceptable carriers. The compositions may include
compounds of the invention, and optionally a pharmaceutically
acceptable carrier, adjuvant or vehicle. In certain embodiments,
these compositions optionally further comprise one or more
additional therapeutic agents useful for the treatment of CFTR
mediated diseases or disorders.
[0025] Pharmaceutical Compositions
[0026] The pharmaceutical compositions of the present invention
comprise a therapeutically effective amount of a compound of the
present invention formulated together with one or more
pharmaceutically acceptable carriers or excipients.
[0027] As used herein, the term "pharmaceutically acceptable
carrier or excipient" means a non-toxic, inert solid, semi-solid,
gel or liquid filler, diluent, encapsulating material or
formulation auxiliary of any type. Some examples of materials which
can serve as pharmaceutically acceptable carriers are sugars such
as lactose, glucose and sucrose; cyclodextrins such as
alpha-(.alpha.), beta-(.beta.) and gamma-(.gamma.) cyclodextrins;
starches such as corn starch and potato starch; cellulose and its
derivatives such as sodium carboxymethyl cellulose, ethyl cellulose
and cellulose acetate; powdered tragacanth; malt; gelatin; talc;
excipients such as cocoa butter and suppository waxes; oils such as
peanut oil, cottonseed oil, safflower oil, sesame oil, olive oil,
corn oil and soybean oil; glycols such as propylene glycol; esters
such as ethyl oleate and ethyl laurate; agar; buffering agents such
as magnesium hydroxide and aluminum hydroxide; alginic acid;
pyrogen-free water; isotonic saline; Ringer's solution; ethyl
alcohol, and phosphate buffer solutions, as well as other non-toxic
compatible lubricants such as sodium lauryl sulfate and magnesium
stearate, as well as coloring agents, releasing agents, coating
agents, sweetening, flavoring and perfuming agents, preservatives
and antioxidants can also be present in the composition, according
to the judgment of the formulator.
[0028] The pharmaceutical compositions of this invention may be
administered orally, parenterally, by inhalation spray, topically,
rectally, nasally, buccally, vaginally or via an implanted
reservoir. In a preferred embodiment, administration is parenteral
administration by injection.
[0029] The pharmaceutical compositions of this invention may
contain any conventional non-toxic pharmaceutically-acceptable
carriers, adjuvants or vehicles. In some cases, the pH of the
formulation may be adjusted with pharmaceutically acceptable acids,
bases or buffers to enhance the stability of the formulated
compound or its delivery form. The term parenteral as used herein
includes subcutaneous, intracutaneous, intravenous, intramuscular,
intraarticular, intraarterial, intrasynovial, intrasternal,
intrathecal, intralesional and intracranial injection or infusion
techniques.
[0030] Liquid dosage forms for oral administration include
pharmaceutically acceptable emulsions, microemulsions, solutions,
suspensions, syrups and elixirs. In addition to the active
compounds, the liquid dosage forms may contain inert diluents
commonly used in the art such as, for example, water or other
solvents, solubilizing agents and emulsifiers such as ethyl
alcohol, isopropyl alcohol, ethyl carbonate, ethyl acetate, benzyl
alcohol, benzyl benzoate, propylene glycol, 1,3-butylene glycol,
dimethylformamide, oils (in particular, cottonseed, groundnut,
corn, germ, olive, castor, and sesame oils), glycerol,
tetrahydrofurfuryl alcohol, polyethylene glycols and fatty acid
esters of sorbitan, and mixtures thereof. Besides inert diluents,
the oral compositions can also include adjuvants such as wetting
agents, emulsifying and suspending agents, sweetening, flavoring,
and perfuming agents.
[0031] Injectable preparations, for example, sterile injectable
aqueous or oleaginous suspensions, may be formulated according to
the known art using suitable dispersing or wetting agents and
suspending agents. The sterile injectable preparation may also be a
sterile injectable suspension or emulsion, such as INTRALIPID.RTM.,
LIPOSYN.RTM. or OMEGAVEN.RTM., or solution, in a nontoxic
parenterally acceptable diluent or solvent, for example, as a
solution in 1,3-butanediol. INTRALIPID.RTM. is an intravenous fat
emulsion containing 10-30% soybean oil, 1-10% egg yolk
phospholipids, 1-10% glycerin and water. LIPOSYN.RTM. is also an
intravenous fat emulsion containing 2-15% safflower oil, 2-15%
soybean oil, 0.5-5% egg phosphatides 1-10% glycerin and water.
OMEGAVEN.RTM. is an emulsion for infusion containing about 5-25%
fish oil, 0.5-10% egg phosphatides, 1-10% glycerin and water. Among
the acceptable vehicles and solvents that may be employed are
water, Ringer's solution, USP and isotonic sodium chloride
solution. In addition, sterile, fixed oils are conventionally
employed as a solvent or suspending medium. For this purpose any
bland fixed oil can be employed including synthetic mono- or
diglycerides. In addition, fatty acids such as oleic acid are used
in the preparation of injectables.
[0032] The injectable formulations can be sterilized, for example,
by filtration through a bacterial-retaining filter, or by
incorporating sterilizing agents in the form of sterile solid
compositions which can be dissolved or dispersed in sterile water
or other sterile injectable medium prior to use.
[0033] Compositions for rectal or vaginal administration are
preferably suppositories which can be prepared by mixing the
compounds of this invention with suitable non-irritating excipients
or carriers such as cocoa butter, polyethylene glycol or a
suppository wax which are solid at ambient temperature but liquid
at body temperature and therefore melt in the rectum or vaginal
cavity and release the active compound.
[0034] Solid dosage forms for oral administration include capsules,
tablets, pills, powders, and granules. In such solid dosage forms,
the active compound is mixed with at least one inert,
pharmaceutically acceptable excipient or carrier such as sodium
citrate or dicalcium phosphate and/or: a) fillers or extenders such
as starches, lactose, sucrose, glucose, mannitol, and silicic acid,
b) binders such as, for example, carboxymethylcellulose, alginates,
gelatin, polyvinylpyrrolidinone, sucrose, and acacia, c) humectants
such as glycerol, d) disintegrating agents such as agar-agar,
calcium carbonate, potato or tapioca starch, alginic acid, certain
silicates, and sodium carbonate, e) solution retarding agents such
as paraffin, f) absorption accelerators such as quaternary ammonium
compounds, g) wetting agents such as, for example, cetyl alcohol
and glycerol monostearate, h) absorbents such as kaolin and
bentonite clay, and i) lubricants such as talc, calcium stearate,
magnesium stearate, solid polyethylene glycols, sodium lauryl
sulfate, and mixtures thereof. In the case of capsules, tablets and
pills, the dosage form may also comprise buffering agents.
[0035] Solid compositions of a similar type may also be employed as
fillers in soft and hard-filled gelatin capsules using such
excipients as lactose or milk sugar as well as high molecular
weight polyethylene glycols and the like.
[0036] The solid dosage forms of tablets, dragees, capsules, pills,
and granules can be prepared with coatings and shells such as
enteric coatings and other coatings well known in the
pharmaceutical formulating art. They may optionally contain
opacifying agents and can also be of a composition that they
release the active ingredient(s) only, or preferentially, in a
certain part of the intestinal tract, optionally, in a delayed
manner. Examples of embedding compositions that can be used include
polymeric substances and waxes.
[0037] Dosage forms for topical or transdermal administration of a
compound of this invention include ointments, pastes, creams,
lotions, gels, powders, solutions, sprays, inhalants or patches.
The active component is admixed under sterile conditions with a
pharmaceutically acceptable carrier and any needed preservatives or
buffers as may be required. Ophthalmic formulation, ear drops, eye
ointments, powders and solutions are also contemplated as being
within the scope of this invention.
[0038] The ointments, pastes, creams and gels may contain, in
addition to an active compound of this invention, excipients such
as animal and vegetable fats, oils, waxes, paraffins, starch,
tragacanth, cellulose derivatives, polyethylene glycols, silicones,
bentonites, silicic acid, talc and zinc oxide, or mixtures
thereof.
[0039] Powders and sprays can contain, in addition to the compounds
of this invention, excipients such as lactose, talc, silicic acid,
aluminum hydroxide, calcium silicates and polyamide powder, or
mixtures of these substances. Sprays can additionally contain
customary propellants such as chlorofluorohydrocarbons.
[0040] Transdermal patches have the added advantage of providing
controlled delivery of a compound to the body. Such dosage forms
can be made by dissolving or dispensing the compound in the proper
medium. Absorption enhancers can also be used to increase the flux
of the compound across the skin. The rate can be controlled by
either providing a rate controlling membrane or by dispersing the
compound in a polymer matrix or gel.
[0041] For pulmonary delivery, a therapeutic composition of the
invention is formulated and administered to the patient in solid or
liquid particulate form by direct administration e.g., inhalation
into the respiratory system. Solid or liquid particulate forms of
the active compound prepared for practicing the present invention
include particles of respirable size: that is, particles of a size
sufficiently small to pass through the mouth and larynx upon
inhalation and into the bronchi and alveoli of the lungs. Delivery
of aerosolized therapeutics is known in the art (see, for example
U.S. Pat. No. 5,767,068 to VanDevanter et al., U.S. Pat. No.
5,508,269 to Smith et al., and WO 98/43650 by Montgomery).
DEFINITIONS
[0042] Listed below are definitions of various terms used to
describe this invention. These definitions apply to the terms as
they are used throughout this specification and claims, unless
otherwise limited in specific instances, either individually or as
part of a larger group.
[0043] The term "aliphatic group" or "aliphatic" refers to a
non-aromatic moiety that may be saturated (e.g. single bond) or
contain one or more units of unsaturation, e.g., double and/or
triple bonds. An aliphatic group may be straight chained, branched
or cyclic, contain carbon, hydrogen or, optionally, one or more
heteroatoms and may be substituted or unsubstituted. In addition to
aliphatic hydrocarbon groups, aliphatic groups include, for
example, polyalkoxyalkyls, such as polyalkylene glycols,
polyamines, and polyimines, for example. Such aliphatic groups may
be further substituted. It is understood that aliphatic groups may
include alkyl, substituted alkyl, alkenyl, substituted alkenyl,
alkynyl, substituted alkynyl, and substituted or unsubstituted
cycloalkyl groups as described herein.
[0044] The term "acyl" refers to a carbonyl substituted with
hydrogen, alkyl, partially saturated or fully saturated cycloalkyl,
partially saturated or fully saturated heterocycle, aryl, or
heteroaryl. For example, acyl includes groups such as
(C.sub.1-C.sub.6) alkanoyl (e.g., formyl, acetyl, propionyl,
butyryl, valeryl, caproyl, t-butylacetyl, etc.),
(C.sub.3-C.sub.6)cycloalkylcarbonyl (e.g., cyclopropylcarbonyl,
cyclobutylcarbonyl, cyclopentylcarbonyl, cyclohexylcarbonyl, etc.),
heterocyclic carbonyl (e.g., pyrrolidinylcarbonyl,
pyrrolid-2-one-5-carbonyl, piperidinylcarbonyl,
piperazinylcarbonyl, tetrahydrofuranylcarbonyl, etc.), aroyl (e.g.,
benzoyl) and heteroaroyl (e.g., thiophenyl-2-carbonyl,
thiophenyl-3-carbonyl, furanyl-2-carbonyl, furanyl-3-carbonyl,
1H-pyrroyl-2-carbonyl, 1H-pyrroyl-3-carbonyl,
benzo[b]thiophenyl-2-carbonyl, etc.). In addition, the alkyl,
cycloalkyl, heterocycle, aryl and heteroaryl portion of the acyl
group may be any one of the groups described in the respective
definitions. When indicated as being "optionally substituted", the
acyl group may be unsubstituted or optionally substituted with one
or more substituents (typically, one to three substituents)
independently selected from the group of substituents listed below
in the definition for "substituted" or the alkyl, cycloalkyl,
heterocycle, aryl and heteroaryl portion of the acyl group may be
substituted as described above in the preferred and more preferred
list of substituents, respectively.
[0045] The term "alkyl" is intended to include both branched and
straight chain, substituted or unsubstituted saturated aliphatic
hydrocarbon radicals/groups having the specified number of carbons.
Preferred alkyl groups comprise about 1 to about 24 carbon atoms
("C.sub.1-C.sub.24"). Other preferred alkyl groups comprise at
about 1 to about 8 carbon atoms ("C.sub.1-C.sub.8") such as about 1
to about 6 carbon atoms ("C.sub.1-C.sub.6"), or such as about 1 to
about 3 carbon atoms ("C.sub.1-C.sub.3"). Examples of
C.sub.1-C.sub.6 alkyl radicals include, but are not limited to,
methyl, ethyl, propyl, isopropyl, n-butyl, tert-butyl, n-pentyl,
neopentyl and n-hexyl radicals.
[0046] The term "alkenyl" refers to linear or branched radicals
having at least one carbon-carbon double bond. Such radicals
preferably contain from about two to about twenty-four carbon atoms
("C.sub.2-C.sub.24"). Other preferred alkenyl radicals are "lower
alkenyl" radicals having two to about ten carbon atoms
("C.sub.2-C.sub.10") such as ethenyl, allyl, propenyl, butenyl and
4-methylbutenyl. Preferred lower alkenyl radicals include 2 to
about 6 carbon atoms ("C.sub.2-C.sub.6"). The terms "alkenyl", and
"lower alkenyl", embrace radicals having "cis" and "trans"
orientations, or alternatively, "E" and "Z" orientations.
[0047] The term "alkynyl" refers to linear or branched radicals
having at least one carbon-carbon triple bond. Such radicals
preferably contain from about two to about twenty-four carbon atoms
("C.sub.2-C.sub.24"). Other preferred alkynyl radicals are "lower
alkynyl" radicals having two to about ten carbon atoms such as
propargyl, 1-propynyl, 2-propynyl, 1-butyne, 2-butynyl and
1-pentynyl. Preferred lower alkynyl radicals include 2 to about 6
carbon atoms ("C.sub.2-C.sub.6").
[0048] The term "cycloalkyl" refers to saturated carbocyclic
radicals having three to about twelve carbon atoms
("C.sub.3-C.sub.12"). The term "cycloalkyl" embraces saturated
carbocyclic radicals having three to about twelve carbon atoms.
Examples of such radicals include cyclopropyl, cyclobutyl,
cyclopentyl and cyclohexyl.
[0049] The term "cycloalkenyl" refers to partially unsaturated
carbocyclic radicals having three to twelve carbon atoms.
Cycloalkenyl radicals that are partially unsaturated carbocyclic
radicals that contain two double bonds (that may or may not be
conjugated) can be called "cycloalkyldienyl". More preferred
cycloalkenyl radicals are "lower cycloalkenyl" radicals having four
to about eight carbon atoms. Examples of such radicals include
cyclobutenyl, cyclopentenyl and cyclohexenyl.
[0050] The term "alkylene," as used herein, refers to a divalent
group derived from a straight chain or branched saturated
hydrocarbon chain having the specified number of carbons atoms.
Examples of alkylene groups include, but are not limited to,
ethylene, propylene, butylene, 3-methyl-pentylene, and
5-ethyl-hexylene.
[0051] The term "alkenylene," as used herein, denotes a divalent
group derived from a straight chain or branched hydrocarbon moiety
containing the specified number of carbon atoms having at least one
carbon-carbon double bond. Alkenylene groups include, but are not
limited to, for example, ethenylene, 2-propenylene, 2-butenylene,
1-methyl-2-buten-1-ylene, and the like.
[0052] The term "alkynylene," as used herein, denotes a divalent
group derived from a straight chain or branched hydrocarbon moiety
containing the specified number of carbon atoms having at least one
carbon-carbon triple bond. Representative alkynylene groups
include, but are not limited to, for example, propynylene,
1-butynylene, 2-methyl-3-hexynylene, and the like.
[0053] The term "alkoxy" refers to linear or branched
oxy-containing radicals each having alkyl portions of one to about
twenty-four carbon atoms or, preferably, one to about twelve carbon
atoms. More preferred alkoxy radicals are "lower alkoxy" radicals
having one to about ten carbon atoms and more preferably having one
to about eight carbon atoms. Examples of such radicals include
methoxy, ethoxy, propoxy, butoxy and tert-butoxy.
[0054] The term "alkoxyalkyl" refers to alkyl radicals having one
or more alkoxy radicals attached to the alkyl radical, that is, to
form monoalkoxyalkyl and dialkoxyalkyl radicals.
[0055] The term "aryl", alone or in combination, means an aromatic
system containing one, two or three rings wherein such rings may be
attached together in a pendent manner or may be fused. The term
"aryl" embraces aromatic radicals such as phenyl, naphthyl,
tetrahydronaphthyl, indane furanyl, quinazolinyl, pyridyl and
biphenyl.
[0056] The terms "heterocyclyl", "heterocycle" "heterocyclic" or
"heterocyclo" refer to saturated, partially unsaturated and
unsaturated heteroatom-containing ring-shaped radicals, which can
also be called "heterocyclyl", "heterocycloalkenyl" and
"heteroaryl" correspondingly, where the heteroatoms may be selected
from nitrogen, sulfur and oxygen. Examples of saturated
heterocyclyl radicals include saturated 3 to 6-membered
heteromonocyclic group containing 1 to 4 nitrogen atoms (e.g.
pyrrolidinyl, imidazolidinyl, piperidino, piperazinyl, etc.);
saturated 3 to 6-membered heteromonocyclic group containing 1 to 2
oxygen atoms and 1 to 3 nitrogen atoms (e.g. morpholinyl, etc.);
saturated 3 to 6-membered heteromonocyclic group containing 1 to 2
sulfur atoms and 1 to 3 nitrogen atoms (e.g., thiazolidinyl, etc.).
Examples of partially unsaturated heterocyclyl radicals include
dihydrothiophene, dihydropyran, dihydrofuran and dihydrothiazole.
Heterocyclyl radicals may include a pentavalent nitrogen, such as
in tetrazolium and pyridinium radicals. The term "heterocycle" also
embraces radicals where heterocyclyl radicals are fused with aryl
or cycloalkyl radicals. Examples of such fused bicyclic radicals
include benzofuran, benzothiophene, and the like.
[0057] The term "heteroaryl" refers to unsaturated aromatic
heterocyclyl radicals. Examples of heteroaryl radicals include
unsaturated 3 to 6 membered heteromonocyclic group containing 1 to
4 nitrogen atoms, for example, pyrrolyl, pyrrolinyl, imidazolyl,
pyrazolyl, pyridyl, pyrimidyl, pyrazinyl, pyridazinyl, triazolyl
(e.g., 4H-1,2,4-triazolyl, 1H-1,2,3-triazolyl, 2H-1,2,3-triazolyl,
etc.) tetrazolyl (e.g. 1H-tetrazolyl, 2H-tetrazolyl, etc.), etc.;
unsaturated condensed heterocyclyl group containing 1 to 5 nitrogen
atoms, for example, indolyl, isoindolyl, indolizinyl,
benzimidazolyl, quinolyl, isoquinolyl, indazolyl, benzotriazolyl,
tetrazolopyridazinyl (e.g., tetrazolo[1,5-b]pyridazinyl, etc.),
etc.; unsaturated 3 to 6-membered heteromonocyclic group containing
an oxygen atom, for example, pyranyl, furyl, etc.; unsaturated 3 to
6-membered heteromonocyclic group containing a sulfur atom, for
example, thienyl, etc.; unsaturated 3- to 6-membered
heteromonocyclic group containing 1 to 2 oxygen atoms and 1 to 3
nitrogen atoms, for example, oxazolyl, isoxazolyl, oxadiazolyl
(e.g., 1,2,4-oxadiazolyl, 1,3,4-oxadiazolyl, 1,2,5-oxadiazolyl,
etc.) etc.; unsaturated condensed heterocyclyl group containing 1
to 2 oxygen atoms and 1 to 3 nitrogen atoms (e.g. benzoxazolyl,
benzoxadiazolyl, etc.); unsaturated 3 to 6-membered
heteromonocyclic group containing 1 to 2 sulfur atoms and 1 to 3
nitrogen atoms, for example, thiazolyl, thiadiazolyl (e.g.,
1,2,4-thiadiazolyl, 1,3,4-thiadiazolyl, 1,2,5-thiadiazolyl, etc.)
etc.; unsaturated condensed heterocyclyl group containing 1 to 2
sulfur atoms and 1 to 3 nitrogen atoms (e.g., benzothiazolyl,
benzothiadiazolyl, etc.) and the like.
[0058] The term "heterocycloalkyl" refers to
heterocyclo-substituted alkyl radicals. More preferred
heterocycloalkyl radicals are "lower heterocycloalkyl" radicals
having one to six carbon atoms in the heterocyclo radical.
[0059] The term "alkylthio" refers to radicals containing a linear
or branched alkyl radical, of one to about ten carbon atoms
attached to a divalent sulfur atom. Preferred alkylthio radicals
have alkyl radicals of one to about twenty-four carbon atoms or,
preferably, one to about twelve carbon atoms. More preferred
alkylthio radicals have alkyl radicals which are "lower alkylthio"
radicals having one to about ten carbon atoms. Most preferred are
alkylthio radicals having lower alkyl radicals of one to about
eight carbon atoms. Examples of such lower alkylthio radicals
include methylthio, ethylthio, propylthio, butylthio and
hexylthio.
[0060] The terms "aralkyl" or "arylalkyl" refer to aryl-substituted
alkyl radicals such as benzyl, diphenylmethyl, triphenylmethyl,
phenylethyl, and diphenylethyl.
[0061] The term "aryloxy" refers to aryl radicals attached through
an oxygen atom to other radicals.
[0062] The terms "aralkoxy" or "arylalkoxy" refer to aralkyl
radicals attached through an oxygen atom to other radicals.
[0063] The term "aminoalkyl" refers to alkyl radicals substituted
with amino radicals. Preferred aminoalkyl radicals have alkyl
radicals having about one to about twenty-four carbon atoms or,
preferably, one to about twelve carbon atoms. More preferred
aminoalkyl radicals are "lower aminoalkyl" that have alkyl radicals
having one to about ten carbon atoms. Most preferred are aminoalkyl
radicals having lower alkyl radicals having one to eight carbon
atoms. Examples of such radicals include aminomethyl, aminoethyl,
and the like.
[0064] The term "alkylamino" denotes amino groups which are
substituted with one or two alkyl radicals. Preferred alkylamino
radicals have alkyl radicals having about one to about twenty
carbon atoms or, preferably, one to about twelve carbon atoms. More
preferred alkylamino radicals are "lower alkylamino" that have
alkyl radicals having one to about ten carbon atoms. Most preferred
are alkylamino radicals having lower alkyl radicals having one to
about eight carbon atoms. Suitable lower alkylamino may be
monosubstituted N-alkylamino or disubstituted N,N-alkylamino, such
as N-methylamino, N-ethylamino, N,N-dimethylamino, N,N-diethylamino
or the like.
[0065] The term "substituted" refers to the replacement of one or
more hydrogen radicals in a given structure with the radical of a
specified substituent including, but not limited to: deutero, halo,
alkyl, cycloalkyl, alkenyl, alkynyl, aryl, heterocyclyl, thiol,
alkylthio, arylthio, alkylthioalkyl, arylthioalkyl, alkylsulfonyl,
alkylsulfonylalkyl, arylsulfonylalkyl, alkoxy, aryloxy, aralkoxy,
aminocarbonyl, alkylaminocarbonyl, arylaminocarbonyl,
alkoxycarbonyl, aryloxycarbonyl, haloalkyl, amino, trifluoromethyl,
cyano, nitro, alkylamino, arylamino, alkylaminoalkyl,
arylaminoalkyl, aminoalkylamino, hydroxy, alkoxyalkyl,
carboxyalkyl, alkoxycarbonylalkyl, aminocarbonylalkyl, acyl,
aralkoxycarbonyl, carboxylic acid, sulfonic acid, sulfonyl,
phosphonic acid, aryl, heteroaryl, heterocyclic, and aliphatic. It
is understood that the substituent may be further substituted.
[0066] For simplicity, chemical moieties that are defined and
referred to throughout can be univalent chemical moieties (e.g.,
alkyl, aryl, etc.) or multivalent moieties under the appropriate
structural circumstances clear to those skilled in the art. For
example, an "alkyl" moiety can be referred to a monovalent radical
(e.g. CH.sub.3--CH.sub.2--), or in other instances, a bivalent
linking moiety can be "alkyl," in which case those skilled in the
art will understand the alkyl to be a divalent radical (e.g.,
--CH.sub.2--CH.sub.2--), which is equivalent to the term
"alkylene." Similarly, in circumstances in which divalent moieties
are required and are stated as being "alkoxy", "alkylamino",
"aryloxy", "alkylthio", "aryl", "heteroaryl", "heterocyclic",
"alkyl" "alkenyl", "alkynyl", "aliphatic", or "cycloalkyl", those
skilled in the art will understand that the terms alkoxy",
"alkylamino", "aryloxy", "alkylthio", "aryl", "heteroaryl",
"heterocyclic", "alkyl", "alkenyl", "alkynyl", "aliphatic", or
"cycloalkyl" refer to the corresponding divalent moiety.
[0067] The terms "halogen" or "halo" as used herein, refers to an
atom selected from fluorine, chlorine, bromine and iodine.
[0068] The terms "compound" "drug", and "prodrug" as used herein
all include pharmaceutically acceptable salts, co-crystals,
solvates, hydrates, polymorphs, enantiomers, diastereoisomers,
racemates and the like of the compounds, drugs and prodrugs having
the formulas as set forth herein.
[0069] Substituents indicated as attached through variable points
of attachments can be attached to any available position on the
ring structure.
[0070] As used herein, the term "effective amount of the subject
compounds," with respect to the subject method of treatment, refers
to an amount of the subject compound which, when delivered as part
of desired dose regimen, brings about management of the disease or
disorder to clinically acceptable standards.
[0071] "Treatment" or "treating" refers to an approach for
obtaining beneficial or desired clinical results in a patient. For
purposes of this invention, beneficial or desired clinical results
include, but are not limited to, one or more of the following:
alleviation of symptoms, diminishment of extent of a disease,
stabilization (i.e., not worsening) of a state of disease,
preventing spread (i.e., metastasis) of disease, preventing
occurrence or recurrence of disease, delay or slowing of disease
progression, amelioration of the disease state, and remission
(whether partial or total).
ABBREVIATIONS
[0072] All temperatures are in degrees Centigrade [0073] rt--room
temperature [0074] hr--hours [0075] Et.sub.3N--triethylamine [0076]
DMSO--dimethylsulfoxide [0077] EtOAc--ethyl acetate [0078]
Na.sub.2SO.sub.4--sodium sulfate [0079] MgSO.sub.4--magnesium
sulfate [0080] K.sub.2CO.sub.3--potassium carbonate [0081]
Et.sub.2O--diethyl ether [0082] TFA--trifluoroacetic acid [0083]
CH.sub.2Cl.sub.2--methylene chloride [0084] CHCl.sub.3--chloroform
[0085] Na.sub.2S.sub.2O.sub.4--sodium dithionite [0086]
NaHCO.sub.3--sodium bicarbonate [0087] H.sub.2O--water [0088]
DIPEA--diisopropylethylamine [0089] HCl--hydrochloric acid [0090]
NaH--sodium hydride [0091] THF--tetrahydrofuran [0092]
NH.sub.4Cl--ammonium chloride [0093] HOAc--acetic acid [0094]
n-BuLi--n-butyl lithium [0095] SO.sub.2Cl.sub.2--sulfuryl chloride
[0096] Fe--iron powder [0097] Cs.sub.2CO.sub.3--cesium carbonate
[0098]
PdCl.sub.2(PPh.sub.3).sub.2--bis(triphenylphosphine)palladium(II)
dichloride [0099] CuI--copper(I) iodide [0100]
Pd.sub.2(dba).sub.3--tris(dibenzylideneacetone)dipalladium(0)
[0101] t-BuONa--sodium tert-butoxide [0102]
BINAP--(2,2'-bis(diphenylphosphino)-1,1'-binaphthyl) [0103]
18-crown-6--18-crown-6 ether [0104]
CD.sub.2I.sub.2--diiodomethane-D.sub.2 [0105] NaNO.sub.2--sodium
nitrite [0106] TIPSC1--triisopropylsilyl chloride [0107]
ClSO.sub.3H--chlorosulfonic acid [0108] CH.sub.3COCl--acetyl
chloride [0109] Ac.sub.2O--acetic anhydride [0110]
Xantphos--4,5-bis(diphenylphosphino)-9,9-dimethylxanthene [0111]
BBr.sub.3--boron tribromide [0112] NaBH(OAc).sub.3--sodium
triacetoxyborohydride [0113] DCE--dichloroethane [0114]
Pd(OAc).sub.2--palladium acetate [0115]
P.sub.4S.sub.10--phosphorous pentasulfide [0116] DIAD--diisopropyl
azodicarboxylate [0117] Ph.sub.3P--triphenylphosphine [0118]
CuCl.sub.2--copper(II) chloride.
EXAMPLES
Example 1
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-(2-chlorophenyl)--
3H-imidazo[4,5-b]pyridine (8)
##STR00279##
[0119] tert-Butyl
4-((3-nitropyridin-2-yl)amino)piperidin-1-carboxylate (3)
[0120] Et.sub.3N (2.6 mL, 19.26 mmol) was added to a stirred
solution of 1 (2.35 g, 14.822 mmol) and 2 (2.97 g, 14.822 mmol) in
anhydrous DMSO (30 mL) at room temperature (rt). The resulting
reaction mixture was stirred at 150.degree. C. for 15 hr. After the
reaction was complete, it was cooled to rt and ice-cold H.sub.2O
was added. The resulting mixture was extracted with EtOAc
(2.times.30 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude compound as a thick brown liquid. This was triturated with
hexanes to give 3.3 g (69% yield) of 3 as a yellow solid. LCMS m/z
267 [M-56+H], 223 [M-100+H].
##STR00280##
tert-Butyl
4-(2-(2-chlorophenyl)-3H-imidazo[4,5-b]pyridin-3-yl)piperidine-1-carboxyl-
ate (5)
[0121] Saturated sodium dithionite (8.91 g, 51.18 mmol) solution
was added to a stirred solution of 3 (3.3 g, 10.23 mmol) and 4
(1.43 g, 10.237 mmol) in EtOH (33 mL) at rt. The reaction mixture
was heated to 110.degree. and stirred for 16 hr. After the reaction
was complete, the reaction mixture was cooled to rt and ice-cold
H.sub.2O was added. The resulting mixture was extracted with EtOAc
(2.times.75 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude product. This was washed with Et.sub.2O and n-hexane (1:10)
to give 2.45 g (58% yield) of pale yellow solid 5 which was used in
the next step without any further purification. LCMS m/z 413
[M+H-1], 415 [M+H+1], 313 [M+H-100-1], 315 [M+H-100+1].
##STR00281##
2-(2-Chlorophenyl)-3-(piperidin-4-yl)-3H-imidazo[4,5-b]pyridine
(6)
[0122] TFA (7.5 mL) was added to a stirred solution of 5 (2.45 g,
5.93 mmol) in anhydrous CH.sub.2Cl.sub.2 (25 mL) at 0.degree.. The
reaction mixture was allowed to warm to rt and stirred for 16 hr.
The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2. The organic layer
was washed with H.sub.2O, followed by brine solution and dried over
anhydrous Na.sub.2SO.sub.4. The organic layer concentrated in vacuo
to give crude 6 as a pale yellow solid. This was triturated with
Et.sub.2O and n-hexanes (1:10) to give 1.5 g (81% yield) of 6 as a
pale yellow solid. LCMS m/z 313 [M+H-1], 315 [M+H+1].
##STR00282##
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-(2-chlorophenyl)-
-3H-imidazo[4,5-b]pyridine (8)
[0123] DIPEA (0.19 mL, 1.15 mmol) was added to a stirred solution
of 6 (0.12 g, 0.383 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree.. The reaction mixture was stirred at this temperature for
2 hr and then 7 (0.084 g, 0.383 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min. The
reaction mixture was basified using saturated NaHCO.sub.3 solution
then extracted with CH.sub.2Cl.sub.2. The organic layer was washed
with H.sub.2O, followed by brine solution and dried over anhydrous
Na.sub.2SO.sub.4. The organic layer was concentrated in vacuo to
give the crude product as a semi-solid. The crude product was
purified by flash column chromatography using 100-200 mesh silica
gel. The desired product was eluted in 50% EtOAc in pet-ether to
obtain 0.075 g (39%) of pure 8 as a pale yellow solid. .sup.1H NMR
(DMSO-d.sub.6) .delta. 8.42-8.41 (dd, J=4.8 Hz, J=1.6 Hz, 1H),
8.13-8.11 (dd, J=1.4 Hz, J=7.8 Hz, 1H), 7.67-7.59 (m, 3H),
7.54-7.48 (m, 1H), 7.36-7.33 (dd, J=7.8 Hz, J=5.0 Hz, 1H),
7.28-7.26 (dd, J=8.0 Hz, J=1.6 Hz, 1H), 7.21 (d, J=1.6 Hz, 1H),
7.11 (d, J=8.0 Hz, 1H), 6.18 (s, 2H), 4.00-3.90 (m, 1H), 3.80-3.66
(br m, 2H), 3.10-2.85 (br m, 2H), 2.38-2.26 (br m, 2H), 2.02-1.74
(br m, 2H). LCMS m/z 497 [M+H-1], 499 [M+H+1].
Example 2
3-(1-Benzo[d][1,3]dioxol-5-ylsulfonyl(piperidin-4-yl)-2-(2-chlorophenyl)-5-
-methyl-3H-imidazo[4,5-b]pyridine (13)
##STR00283##
[0124] tert-Butyl
4-((6-methyl-3-nitropyridin-2-yl)amino)piperidne-1-carboxylate
(10)
[0125] Et.sub.3N (4.52 mL, 74.578 mmol) was added to a stirred
solution of 9 (4.29 g, 24.859 mmol), 2 (5.0 g, 24.859 mmol) in
anhydrous DMSO (45 mL) at rt. The resulting reaction mixture was
stirred at 150.degree. for 15 hr. After the reaction was complete,
it was cooled to rt and ice-cold H.sub.2O was added. The resulting
mixture was extracted with EtOAc (2.times.50 mL). The combined
organic layers were dried over anhydrous Na.sub.2SO.sub.4 and
concentrated in vacuo in order to afford crude compound as a thick
brown liquid. This was washed with n-hexane to give 4.50 g (54%
yield) of 10 as a yellow solid. LCMS m/z 281 [M-56+H], 237
[M-100+H].
##STR00284##
tert-Butyl
4-(2-(2-chlorophenyl)-5-methyl-3H-imidazo[4,5-b]pyridin-3-yl)piperidine-1-
-carboxylate (11)
[0126] Sodium dithionite (8.28 g, 47.563 mmol) solution was added
to a stirred solution of 10 (3.2 g, 9.512 mmol) and 4 (1.33 g,
9.512 mmol) in EtOH (33 mL) at rt. The reaction mixture was stirred
at 110.degree. for 16 hr. After the reaction was complete, it was
cooled to rt and ice-cold H.sub.2O was added. The resulting mixture
was extracted with EtOAc (2.times.50 mL). The combined organic
layers were dried over anhydrous Na.sub.2SO.sub.4 and concentrated
in vacuo to give crude product. This was triturated with Et.sub.2O
and n-hexane (1:10) to give 2.5 g (65% yield) of 11 as a pale
yellow solid. LCMS m/z 427 [M+H-1], 429 [M+H+1], 327 [M+H-100-1],
329 [M+H-100+1].
##STR00285##
2-(2-Chlorophenyl)-5-methyl-3-(piperidin-4-yl)-3H-imidazo[4,5-b]pyridine
(12)
[0127] TFA (9 mL) was added to a stirred solution of 11 (2.5 g,
5.8556 mmol) in anhydrous CH.sub.2Cl.sub.2 (25 mL) at 0.degree. C.
The reaction mixture was allowed to warm to rt and stirred for 16
hr. After the reaction was complete, the reaction mixture was
basified using saturated NaHCO.sub.3 solution and extracted with
CH.sub.2Cl.sub.2 (2.times.75 mL). The combined organic layers were
washed with H.sub.2O and brine solution. The organic layer was
dried over anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to
give crude 12 as a pale yellow solid. This was triturated with
Et.sub.2O and n-hexane (1:10) to give 1.5 g (78% yield) of 12 as a
pale yellow solid. LCMS m/z 327 [M+H-1], 329 [M+H+1].
##STR00286##
3-(1-Benzo[d][1,3]dioxol-5-ylsulfonyl(piperidin-4-yl)-2-(2-chlorophenyl)--
5-methyl-3H-imidazo[4,5-b]pyridine (13)
[0128] DIPEA (0.19 mL, 1.1013 mmol) was added to a stirred solution
of 12 (0.12 g, 0.3671 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree.. The reaction mixture was stirred at this temperature for
2 hr. and then 7 (0.081 g, 0.3671 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min. The
reaction mixture was basified using saturated NaHCO.sub.3 solution
then extracted with CH.sub.2Cl.sub.2. The organic layer was washed
with H.sub.2O, followed by brine solution and dried over anhydrous
Na.sub.2SO.sub.4. The organic layer was concentrated in vacuo to
give crude product as a semi-solid. The crude product was purified
by flash column chromatography using 100-200 mesh silica gel. The
desired product was eluted in 50% EtOAc in pet-ether to obtain
0.057 g (30%) of pure 13 as a pale yellow solid. .sup.1H NMR
(DMSO-d.sub.6) .delta. 7.98 (d, J=8.4 Hz, 1H), 7.66-7.61 (m, 2H),
7.59 (d, J=7.2 Hz, 1H), 7.52-7.48 (m, 1H), 7.27-7.25 (dd, J=8.2 Hz,
J=1.8 Hz, 1H), 7.21 (d, J=6.4 Hz, 1H), 7.20 (d, J=2.8 Hz, 1H), 7.10
(d, J=7.6 Hz, 1H), 6.17 (s, 2H), 3.94-3.66 (br m, 1H), 3.60-3.34
(br m, 2H), 3.20-2.85 (br m, 2H), 2.63 (s, 3H), 2.66-2.40 (br m,
2H), 2.04-1.48 (br m, 2H). LCMS m/z 511 [M+H-1], 513 [M+H+1].
Example 3
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-5-methyl-2-phenyl-
-3H-imidazo[4,5-b]pyridine (18)
##STR00287##
[0129] tert-Butyl
4-(5-methyl-2-phenyl-3H-imidazo[4,5-b]pyridin-3-yl)piperidine-1-carboxyla-
te (15)
[0130] Sodium dithionite (0.646 g, 3.715 mmol) solution was added
to a stirred solution of 10 (0.250 g, 0.743 mmol) and 14 (0.780 g,
0.743 mmol) in EtOH (9 mL) at rt. The reaction mixture was stirred
at 110.degree. C. for 16 hr. After the reaction was complete, it
was cooled to rt and ice-cold H.sub.2O was added. The resulting
mixture was extracted with EtOAc (3.times.50 mL). The combined
organic layers were dried over anhydrous Na.sub.2SO.sub.4 and
concentrated in vacuo to give 0.350 g of crude 15. This was used in
the next step without any further purification. LCMS m/z 393 [M+H],
293 [M-100+H].
##STR00288##
5-Methyl-2-phenyl-3-(piperidin-4-yl)-3H-imidazo[4,5-b]pyridine
(16)
[0131] TFA (1.5 mL) was added to a stirred solution of 15 (0.35 g,
0.892 mmol) in anhydrous CH.sub.2Cl.sub.2 (10 mL) at 0.degree.. The
reaction mixture was allowed to warm to rt and stirred for 16 hr.
The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2 (3.times.20 mL). The
combined organic layers were dried over anhydrous Na.sub.2SO.sub.4
and concentrated in vacuo to give 0.25 g (96% yield) of crude 16 as
a pale yellow solid. LCMS m/z 293 [M+H].
##STR00289##
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-5-methyl-2-pheny-
l-3H-imidazo[4,5-b]pyridine (18)
[0132] DIPEA (0.34 mL, 2.667 mmol) was added to a stirred solution
of 16 (0.20 g, 0.684 mmol) in anhydrous CH.sub.2Cl.sub.2 (5 mL) at
0.degree.. The reaction mixture was stirred at this temperature for
2 hr and then 17 (0.21 g, 0.889 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min.
After the reaction was complete ice-cold H.sub.2O was added and the
resulting mixture was extracted with CH.sub.2Cl.sub.2. The organic
layer was washed with saturated NaHCO.sub.3 solution followed by
brine solution and dried over anhydrous Na.sub.2SO.sub.4, then
concentrated in vacuo to give crude 18. The crude product was
purified by flash column chromatography using 100-200 mesh silica
gel. The desired product was eluted in 50% EtOAc in pet-ether to
obtain 0.007 g (21%) of pure 18 as a pale yellow solid. .sup.1H NMR
(DMSO-d.sub.6) .delta. 7.95 (d, J=10.8 Hz, 1H), 7.75 (d, J=3.2 Hz,
1H), 7.73-7.69 (dd, J=11.6 Hz, J=2.8 Hz, 1H), 7.66-7.62 (m, 2H),
7.56-7.51 (m, 3H), 7.37 (d, J=11.6 Hz, 1H), 7.17 (d, J=10.8 Hz,
1H), 4.34-4.23 (m, 1H), 3.96 (s, 3H), 3.84-3.75 (m, 2H), 3.02-2.90
(m, 2H), 2.61 (s, 3H), 2.48-2.33 (m, 2H), 1.98-1.89 (m, 2H). LCMS
m/z 497 [M+H-1], 499 [M+H+1].
Example 4
3-(1-((4-Ethylphenyl)sulfonyl)piperidin-4-yl)-2-phenyl-3H-imidazo[4,5-b]py-
ridine (22)
##STR00290##
[0133] tert-Butyl
4-(2-phenyl-3H-imidazo[4,5-b]pyridin-3-yl)piperidine-1-carboxylate
(19)
[0134] Sodium dithionite (22.14 g, 127.18 mmol) solution in
H.sub.2O (100 mL) was added to a stirred solution of 3 (8.2 g,
25.43 mmol) and benzaldehyde (14) (2.7 mL, 25.43 mmol) in EtOH (300
mL) at rt. The reaction mixture was refluxed for 16 hr. After the
reaction was complete, the reaction mixture was cooled to rt and
ice-cold H.sub.2O was added. The resulting mixture was extracted
with EtOAc (3.times.50 mL). The combined organic layers were dried
over anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give
4.2 g (44% yield) of brown liquid 19 which was used in the next
step without any further purification. LCMS m/z 379 [M+H], 279
[M-100+H].
##STR00291##
2-Phenyl-3-(piperidin-4-yl)-3H-imidazo[4,5-b]pyridine (20)
[0135] TFA (10 mL) was added to a stirred solution of 19 (4.2 g,
11.09 mmol) in anhydrous CH.sub.2Cl.sub.2 (45 mL) at 0.degree.. The
reaction mixture was allowed to warm to rt and stirred for 16 hr.
The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2 (3.times.20 mL). The
combined organic layer were dried over anhydrous Na.sub.2SO.sub.4
and concentrated in vacuo to give 2.5 g (81% yield) of crude 20 as
a yellow solid which was used in the next step without any further
purification. LCMS m/z 279 [M+H].
##STR00292##
3-(1-((4-Ethylphenyl)sulfonyl)piperidin-4-yl)-2-phenyl-3H-imidazo[4,5-b]p-
yridine (22)
[0136] DIPEA (0.44 mL, 2.67 mmol) was added to a stirred solution
of 20 (0.250 g, 0.89 mmol) in anhydrous CH.sub.2Cl.sub.2 (2.5 mL)
at 0.degree.. The reaction mixture was warmed to rt and stirred at
rt for 2.5 hr, then cooled again to 0.degree.. 21 (0.18 mL, 1.16
mmol) was added and the resulting mixture was allowed to warm to rt
and stirred at rt for 30 min. The reaction mixture was basified
using saturated NaHCO.sub.3 solution then extracted with
CH.sub.2Cl.sub.2. The organic layer was dried over anhydrous
Na.sub.2SO.sub.4 then concentrated in vacuo to give the crude
product. The crude product was purified by flash column
chromatography using 100-200 mesh silica gel. The desired product
was eluted in 50% EtOAc in pet-ether to obtain 0.170 g (42%) of
pure 22 as a pale yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta.
8.39-8.37 (dd, J=6.4 Hz, J=2.0 Hz, 1H), 8.11-8.07 (dd, J=10.8 Hz,
J=2.0 Hz, 1H), 7.70-7.61 (m, 4H), 7.57-7.52 (m, 3H), 7.48 (d,
J=11.2 Hz, 2H), 7.35-7.30 (dd, J=10.8 Hz, J=6.4 Hz, 1H), 4.41-4.28
(m, 1H), 3.84-3.74 (m, 2H), 3.08-2.90 (m, 2H), 2.76-2.67 (q, J=10.0
Hz, 2H), 2.42-2.29 (m, 2H), 2.01-1.90 (m, 2H), 1.21 (t, J=10.0 Hz,
3H). LCMS m/z 447 [M+H].
Example 5
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-phenyl-3H-imidazo-
[4,5-b]pyridine (23)
##STR00293##
[0137]
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-phenyl-3H--
imidazo[4,5-b]pyridine (23)
[0138] DIPEA (0.26 mL, 1.61 mmol) was added to a stirred solution
of 20 (0.150 g, 0.53 mmol) in anhydrous CH.sub.2Cl.sub.2 (3.0 mL)
at 0.degree. C. The reaction mixture was warmed to rt and stirred
at rt for 2.5 hr, then cooled again to 0.degree. C. 7 (0.1545 g,
0.7 mmol) was added and the resulting mixture was allowed to warm
to rt and stirred at rt for 30 min. The reaction mixture was
basified using saturated NaHCO.sub.3 solution then extracted with
CH.sub.2Cl.sub.2. The organic layer was dried over anhydrous
Na.sub.2SO.sub.4 then concentrated in vacuo to give the crude
product. The crude product was purified by flash column
chromatography using 100-200 mesh silica gel. The desired product
was eluted in 50% EtOAc in pet-ether to obtain 0.75 g (30%) of pure
23 as an off-white solid. .sup.1H NMR (DMSO-d.sub.6) .delta.
8.37-8.35 (dd, J=6.6 Hz, J=1.8 Hz, 1H), 8.09-8.06 (dd, J=10.8 Hz,
J=1.2 Hz, 1H), 7.66 (d, J=3.2 Hz, 1H), 7.64 (d, J=4.8 Hz, 1H), 7.55
(d, J=3.2 Hz, 2H), 7.53 (d, J=1.6 Hz, 1H), 7.33-7.29 (dd, J=10.8
Hz, J=6.0 Hz, 1H), 7.30-7.26 (dd, J=10.8 Hz, J=2.0 Hz, 1H), 7.22
(d, J=2.0 Hz, 1H), 7.12 (d, J=10.8 Hz, 1H), 6.17 (s, 2H), 4.39-4.27
(m, 1H), 3.81-3.71 (m, 2H), 3.05-2.88 (m, 2H), 2.46-2.31 (m, 2H),
1.98-1.87 (m, 2H). LCMS m/z 463 [M+H].
Example 6
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2-chlorophenyl-
)-3H-imidazo[4,5-b]pyridine (26)
##STR00294##
[0139] 3-Nitro-N-(piperidin-4-yl)pyridin-2-amine (24)
[0140] TFA (12.5 mL) was added to a stirred solution of 3 (2.5 g,
7.75 mmol) in anhydrous CH.sub.2Cl.sub.2 (20 mL) at 0.degree.. The
reaction mixture was allowed to warm to rt and stirred for 16 hr.
The reaction mixture was evaporated in vacuo, basified with
saturated NaHCO.sub.3 solution, then extracted with EtOAc
(3.times.20 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give crude
24 as a yellow solid which was used in the next step without any
further purification. LCMS m/z 223 [M+H].
##STR00295##
N-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-3-nitropyridin-2-
-amine (25)
[0141] To a stirred solution of 24 (1.0 g, 4.499 mmol) in pyridine
(12 mL) at 0.degree. was added 17 (1.46 g, 5.848 mmol). The
resulting mixture was allowed to warm to rt and stirred at rt for 3
hr. After the reaction was complete the reaction mixture was poured
into 1N HCl solution and the resulting mixture was extracted with
EtOAc. The organic layer was collected, dried over anhydrous
Na.sub.2SO.sub.4 and concentrated in vacuo to give the crude
product 25 as a yellow solid which was used in the next step
without any further purification. LCMS m/z 427 [M+H-1], 429
[M+H+1].
##STR00296##
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2-chloropheny-
l)-3H-imidazo[4,5-b]pyridine (26)
[0142] Saturated sodium dithionite (407.8 mg, 2.342 mmol) solution
was added to a stirred solution of 25 (200 mg, 0.468 mmol) and 4
(65.8 g, 0.468 mmol) in EtOH (10 mL) at rt. The reaction mixture
was heated to 110.degree. and stirred for 16 hr. After the reaction
was complete, the reaction mixture was cooled to rt and ice-cold
H.sub.2O was added. The resulting mixture was extracted with EtOAc
(3.times.50 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude product. This was purified by flash column chromatography
using 100-200 mesh silica gel. The desired product was eluted in
40% EtOAc in pet-ether to give 0.060 g (27% yield) of off-white
solid 26. .sup.1H NMR (DMSO-d.sub.6) .delta. 8.39-8.38 (dd, J=4.4
Hz, J=0.8 Hz, 1H), 8.13-8.10 (dd, J=7.8 Hz, J=1.2 Hz, 1H), 7.74 (d,
J=2.0 Hz, 1H), 7.72-7.68 (m, 1H), 7.67-7.64 (m, 1H), 7.63-7.58 (m,
2H), 7.53-7.48 (m, 1H), 7.36 (d, J=8.4 Hz, 1H), 7.35 (d, J=7.6 Hz,
1H), 3.96 (s, 3H), 4.01-3.91 (br m, 1H), 3.84-3.70 (br m, 2H),
3.08-2.93 (br m, 2H), 2.44-2.36 (br m, 2H), 2.00-1.74 (br m, 2H).
LCMS m/z 517 [M+H-1], 519 [M+H+1], 521 [M+H+3].
Example 7
3-(1-((3-Chloro-4-methylphenyl)sulfonyl)piperidin-4-yl)-2-(2-chlorophenyl)-
-5-methyl-3H-imidazo[4,5-b]pyridine (28)
##STR00297##
[0143]
3-(1-((3-Chloro-4-methylphenyl)sulfonyl)piperidin-4-yl)-2-(2-chloro-
phenyl)-5-methyl-3H-imidazo[4,5-b]pyridine (28)
[0144] DIPEA (0.19 mL, 1.101 mmol) was added to a stirred solution
of 12 (0.12 g, 0.367 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree. C. The reaction mixture was stirred at this temperature
for 2 hr and then 27 (0.082 g, 0.367 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min.
After the reaction was complete, ice-cold H.sub.2O was added and
the resulting mixture was extracted with CH.sub.2Cl.sub.2. The
organic extract was washed with saturated NaHCO.sub.3, followed by
brine solution and dried over anhydrous Na.sub.2SO.sub.4, then
concentrated in vacuo to give the crude product as a semi-solid.
The crude product was purified by flash column chromatography using
100-200 mesh silica gel. The desired product was eluted in 40%
EtOAc in pet-ether to obtain 0.041 g (22%) of pure 28 as a pale
yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta. 7.98-7.96 (d, J=8
Hz, 1H), 7.70 (s, 1H), 7.64-7.57 (m, 5H), 7.51-7.47 (t, J=7.2 Hz,
1H), 7.21-7.19 (d, J=8.4 Hz, 1H), 3.92-3.89 (d, J=12 Hz 1H), 3.76
(br s, 2H), 3.00 (br s, 2H), 2.62 (br s, 3H), 2.41 (br s, 3H),
2.33-2.28 (br d, J=19.6 Hz, 2H), 1.95-1.84 (br d, J=45.8 Hz, 2H).
LCMS m/z 515 [M+H-1], 517 [M+H+1], 519 [M+H+3].
Example 8
2-(2-Chlorophenyl)-3-(1-((3-fluoro-4-methyoxyphenyl)sulfonyl)piperidin-4-y-
l)-5-methyl-3H-imidazo[4,5-b]pyridine (30)
##STR00298##
[0145]
2-(2-Chlorophenyl)-3-(1-((3-fluoro-4-methyoxyphenyl)sulfonyl)piperi-
din-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (30)
[0146] DIPEA (0.19 mL, 1.101 mmol) was added to a stirred solution
of 12 (0.12 g, 0.367 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree. C. The reaction mixture was stirred at this temperature
for 2 hr and then 29 (0.082 g, 0.367 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min.
After the reaction was complete, ice-cold H.sub.2O was added and
the resulting mixture was extracted with CH.sub.2Cl.sub.2. The
organic extract was washed with saturated NaHCO.sub.3, followed by
brine solution and dried over anhydrous Na.sub.2SO.sub.4, then
concentrated in vacuo to give the crude product as a semi-solid.
The crude product was purified by flash column chromatography using
100-200 mesh silica gel. The desired product was eluted in 40%
EtOAc in pet-ether to obtain 0.040 g (21%) of pure 30 as a pale
yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta. 7.98-7.96 (d,
J=8.4 Hz, 1H), 7.65-7.47 (m, 6H), 7.40-7.36 (t, J=8.4 Hz, 1H),
7.21-7.19 (d, J=8 Hz, 1H), 3.93-3.86 (m, 4H), 3.74 (br s, 2H), 3.00
(br s, 2H), 2.62 (s, 3H), 2.33-2.32 (t, J=1.6 Hz, 2H), 1.94-1.82
(br d, J=48.8 Hz, 2H). LCMS m/z 515 [M+H-1], 517 [M+H+1].
Example 9
2-(3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-3H-imidazo[4,5-
-b]pyridin-2-yl)phenol (32)
##STR00299##
[0147]
2-(3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-3H-imid-
azo[4,5-b]pyridin-2-yl)phenol (32)
[0148] Saturated sodium dithionite (203 mg, 1.171 mmol) solution
was added to a stirred solution of 25 (100 mg, 0.234 mmol) and 31
(0.023 mL, 0.234 mmol) in EtOH (10 mL) at rt. The reaction mixture
was heated to 110.degree. C. and stirred for 16 hr. After the
reaction was complete, the reaction mixture was cooled to rt and
ice-cold H.sub.2O was added. The resulting mixture was extracted
with EtOAc (3.times.50 mL). The combined organic layers were dried
over anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give
the crude product. This was purified by flash column chromatography
using 100-200 mesh silica gel The desired product was eluted in 40%
EtOAc in pet-ether to give 0.023 g (20% yield) of off-white solid
32. .sup.1H NMR (DMSO-d.sub.6) .delta. 10.15 (br s, 1H), 8.32-8.31
(d, J=4.8 Hz, 1H), 8.06-8.03 (d, J=6.6 Hz, 1H), 7.76-7.76 (d, J=1.8
Hz, 1H), 7.73-7.72 (d, J=2.25 Hz, 1H), 7.38-7.27 (m, 4H), 6.98-6.91
(dd, J=7.2 Hz, 2H), 4.08-4.04 (m, 1H), 3.970 (s, 3H), 3.84-3.80 (d,
J=12.3 Hz, 2H), 2.95-2.84 (m, 2H), 2.39-2.27 (q, J=11.85 Hz, 2H)
1.89-1.86 (d, J=10.2 Hz, 2H). LCMS m/z 499 [M+H-1], 501
[M+H+1].
Example 10
3-(1-((3-Chloro-4-methylphenyl)sulfonyl)piperidin-4-yl)-2-(2-chlorophenyl)-
-3H-imidazo[4,5-b]pyridine (33)
##STR00300##
[0149]
3-(1-((3-Chloro-4-methylphenyl)sulfonyl)piperidin-4-yl)-2-(2-chloro-
phenyl)-3H-imidazo[4,5-b]pyridine (33)
[0150] DIPEA (0.2 mL, 1.150 mmol) was added to a stirred solution
of 6 (0.12 g, 0.383 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree. C. The reaction mixture was stirred at this temperature
for 2 hr and then 27 (0.18 mL, 0.498 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min. The
reaction mixture was washed with saturated NaHCO.sub.3, H.sub.2O
was added, and the resulting mixture was extracted with
CH.sub.2Cl.sub.2. The organic layer was dried over anhydrous
Na.sub.2SO.sub.4, then concentrated in vacuo to give the crude
product. This was purified by flash column chromatography using
100-200 mesh silica gel. The desired product was eluted in 50%
EtOAc in pet-ether to obtain 0.93 g (48%) of pure 33 as an
off-white solid. .sup.1H NMR (DMSO-d.sub.6) .delta. 8.41-8.39 (dd,
J=4.8 Hz, 1H), 8.13-8.10 (dd, J=8.1 Hz, 1H), 7.71 (s, 1H),
7.67-7.58 (m, 5H), 7.53-7.50 (dd, J=6.75 Hz, 1H), 7.38-7.32 (dd,
J=4.8 Hz, 1H), 4.02-3.94 (t, J=12 Hz, 1H), 3.80-3.77 (d, J=8.1 Hz,
2H), 3.0 (bs, 2H), 2.425 (br s, 5H), 2.16 (br s, 2H). LCMS m/z 501
[M+H-1], 503 [M+H+1] 505 [M+H+3].
Example 11
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2-fluorophenyl-
)-3H-imidazo[4,5-b]pyridine (37)
##STR00301##
[0151] tert-Butyl
4-(2-(2-fluorophenyl)-3H-imidazo[4,5-b]pyridin-3-yl)piperidine-1-carboxyl-
ate (35)
[0152] Saturated sodium dithionite (1.0 g, 6.20 mmol) solution was
added to a stirred solution of 3 (0.4 g, 1.240 mmol) and 34 (0.154
g, 1.240 mmol) in EtOH (10 mL) and H.sub.2O (2 mL) at rt. The
reaction mixture was heated to 110.degree. C. and stirred for 16
hr. After the reaction was complete, the reaction mixture was
cooled to rt and ice-cold H.sub.2O was added. The resulting mixture
was extracted with EtOAc (2.times.75 mL). The combined organic
layers were dried over anhydrous Na.sub.2SO.sub.4 and concentrated
in vacuo to give the crude product. This was washed with Et.sub.2O
and n-hexane (1:10) to give 0.2 g (41% yield) of pale yellow solid
35 which was used in the next step without any further
purification. LCMS m/z 397 [M+H].
##STR00302##
2-(2-Fluorophenyl)-3-(piperidin-4-yl)-3H-imidazo[4,5-b]pyridine
(36)
[0153] TFA (0.6 mL) was added to a stirred solution of 35 (0.2 g,
0.5044 mmol) in anhydrous CH.sub.2Cl.sub.2 (2 mL) at 0.degree. C.
The reaction mixture was allowed to warm to rt and stirred for 16
hr. The reaction mixture was basified with saturated NaHCO.sub.3
solution then extracted with CH.sub.2Cl.sub.2. The organic layer
was washed with H.sub.2O, followed by brine solution and dried over
anhydrous Na.sub.2SO.sub.4. The organic layer concentrated in vacuo
to give 0.1 g (67% yield) of crude 36 as a pale yellow solid which
was used in the next step without any further purification. LCMS
m/z 297 [M+H].
##STR00303##
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2-fluoropheny-
l)-3H-imidazo[4,5-b]pyridine (37)
[0154] DIPEA (0.17 mL, 1.012 mmol) was added to a stirred solution
of 36 (0.1 g, 0.337 mmol) in anhydrous CH.sub.2Cl.sub.2 (3 mL) at
0.degree.. The reaction mixture was stirred at this temperature for
2 hr and then 17 (0.1 mL, 0.438 mmol) was added. The resulting
mixture was allowed to warm to rt and stirred at rt for 30 min. The
reaction mixture was washed with saturated NaHCO.sub.3, H.sub.2O
was added, and the resulting mixture was extracted with
CH.sub.2Cl.sub.2. The organic layer was dried over anhydrous
Na.sub.2SO.sub.4, then concentrated in vacuo to give the crude
product. This was purified by flash column chromatography using
100-200 mesh silica gel. The desired product was eluted in 50%
EtOAc in pet-ether to obtain 0.12 g (7%) of pure 37 as a pale
yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta. 8.39-8.38 (d,
J=3.9 Hz, 1H), 8.13-8.11 (d, J=6.9 Hz, 1H), 7.75-7.61 (m, 4H),
7.44-7.33 (m, 4H), 4.12 (br s, 1H), 3.96 (s, 3H), 3.81-3.77 (d,
J=12 Hz, 2H), 2.96-2.85 (q, J=11.7 Hz, 2H), 2.44 (br s, 2H),
1.86-1.83 (d, J=10.8 Hz, 2H). LCMS m/z 501 [M+H-1], 503
[M+H+1].
Example 12
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2,4-dichloroph-
enyl)-3H-imidazo[4,5-b]pyridine (43)
##STR00304##
[0155] tert-Butyl
(1-((3-chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)carbamate
(39)
[0156] NaH (1.44 g, 29.94 mmol) was added to a stirred solution of
38 (3.0 g, 14.97 mmol) in anhydrous THF (30 mL) at 0.degree.. The
reaction mixture was stirred for 15 min, then 17 (3.67 g, 14.97
mmol) was added dropwise. The resulting mixture was warmed to rt
and stirred at rt for 1 hr. Ice-cold H.sub.2O was added and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over Na.sub.2SO.sub.4 and concentrated in vacuo
to give the crude product as an off white solid. This was washed
with n-hexane to give pure 39 (3.3 g, 69% yield) as an off white
solid. LCMS m/z 305 [M+H-100-1], 307 [M+H-100+1], 405 [M+H-1], 407
[M+H+1].
##STR00305##
1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-amine (40)
[0157] TFA (15 mL) was added to a stirred solution of 39 (5 g,
12.34 mmol) in anhydrous CH.sub.2Cl.sub.2 (50 mL) at 0.degree.. The
reaction mixture was allowed to warm to rt and stirred for 5 hr.
The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2. The organic layer
was washed with H.sub.2O, followed by brine solution and dried over
anhydrous Na.sub.2SO.sub.4. The organic layer concentrated in vacuo
to give crude 40 as a pale yellow solid. This was triturated with
Et.sub.2O and n-hexanes (1:10) to give 3.2 g (85% yield) of 40 as
an off white solid. LCMS m/z 305 [M+H-1], 307 [M+H+1].
##STR00306##
N-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-3-nitropyridin-2-
-amine (25)
[0158] Et.sub.3N (1.9 mL, 13.64 mmol) was added to a stirred
solution of 40 (3.2 g, 10.49 mmol) and 1 (1.65 g, 10.49 mmol) in
anhydrous DMSO (160 mL) at rt. The resulting reaction mixture was
stirred at 150.degree. for 4 hr. After the reaction was complete,
it was cooled to rt and poured into brine solution and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over anhydrous Na.sub.2SO.sub.4 and concentrated
in vacuo to give the crude compound as a yellow solid. This was
triturated with Et.sub.2O and hexanes (1:10) to give 4.1 g (91%
yield) of 25 as a yellow solid. LCMS m/z 427 [M+H-1], 429
[M+H+1].
##STR00307##
N.sup.2-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)pyridine-2,-
3-diamine (41)
[0159] A mixture of 25 (4.1 g, 9.60 mmol), iron powder (2.68 g,
48.02 mmol) and NH.sub.4Cl (0.77 g, 14.40 mmol) in EtOH (40 mL) and
H.sub.2O (10 mL) was refluxed for 2 hr. The reaction mixture was
filtered through a pad of Celite and the filtrate was concentrated
to remove the EtOH. The remaining aqueous mixture was diluted with
H.sub.2O and extracted with EtOAc. The organic layer was dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give 41
(3.0 g, 79% yield) as a brown solid which was used in the next step
without any further purification. LCMS m/z 397 [M+H-1], 399
[M+H+1].
##STR00308##
3-(1-((3-Chloro-4-methoxyphenyl)sulfonyl)piperidin-4-yl)-2-(2,4-dichlorop-
henyl)-3H-imidazo[4,5-b]pyridine (43)
[0160] A solution of 41 (0.2 g, 0.503 mmol) and 42 (0.0881 g, 0.503
mmol) in HOAc (6 mL) was heated refluxed for 6 hr. After the
reaction was complete, the reaction mixture was cooled to rt
basified with saturated NaHCO.sub.3 solution. The resulting mixture
was extracted with EtOAc and the organic layer was dried over
anhydrous Na.sub.2SO.sub.4 then concentrated in vacuo to give the
crude product as a yellow solid. This was purified by flash column
chromatography using 100-200 mesh silica gel. The desired product
was eluted in 50% EtOAc in pet-ether to obtain 0.059 g (21%) of
pure 43 as a pale yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta.
8.41-8.39 (dd, J=4.65 Hz, 1H), 8.14-8.11 (dd, J=8.1 Hz, 1H),
7.85-7.84 (d, J=1.8 Hz, 1H), 7.75-7.57 (m, 4H), 7.38-7.33 (m, 2H),
4.02-3.96 (m, 1H), 3.96 (s, 3H), 3.77-3.74 (d, J=9.9 Hz, 2H), 3.0
(br s, 2H), 2.42 (br s, 2H), 1.87 (br s, 2H). LCMS m/z 551 [M+H-1],
553 [M+H+1], 555 [M+H+3], 557 [M+H+5].
Example 13
2-(3-Chloropyridin-4-yl)-3-(1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulfo-
nyl)piperidin-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (51)
##STR00309##
[0161] 2,2-Difluorobenzo[d][1,3]dioxole-5-sulfonyl chloride
(45)
[0162] N-BuLi (1.6 M) (16.8 mL, 42.194 mmol) was added dropwise to
a stirred solution of 44 (10 g, 42.194 mmol) in anhydrous Et.sub.2O
(100 mL) at -30.degree.. The reaction mixture was stirred for 10
min and then SO.sub.2Cl.sub.2 (3.41 mL, 42.19 mmol) was added
dropwise. The resulting mixture was stirred at -30.degree. for 1
hr, then warmed to rt and stirred at rt for 48 hr. The resulting
reaction mixture was used in the next step without workup or
purification. .sup.1H NMR (DMSO-d.sub.6) .delta. 7.92-7.89 (dd,
J=8.4 HZ, J=2.0 Hz, 1H), 7.76 (d, J=2.0 Hz, 1H), 7.30 (d, J=8.8 Hz,
1H). IR (KBr pellet) 1387, 1167 cm.sup.-1.
##STR00310##
tert-Butyl
(1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulfonyl)piperidin-4-yl)carbama-
te (46)
[0163] NaH (3.5 g, 74.89 mmol) was added to a stirred solution of
38 (7.5 g, 37.44 mmol) in anhydrous THF (80 mL) at 0.degree. C. The
reaction mixture was stirred for 15 min, then 45 (9.31 g, 37.44
mmol) was added dropwise. The resulting mixture was warmed to rt
and stirred at rt for 1 hr. Ice-cold H.sub.2O was added and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over Na.sub.2SO.sub.4 and concentrated in vacuo
to give the product 46 (8 g, 51% yield) as an off white solid,
which was suitable for use in the next step without purification.
LCMS m/z 419 [M-H].
##STR00311##
1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulfonyl0piperidin-4-amine
(47)
[0164] TFA (24 mL) was added to a stirred solution of 46 (8 g,
19.02 mmol) in anhydrous CH.sub.2Cl.sub.2 (80 mL) at 0.degree. C.
The reaction mixture was allowed to warm to rt and stirred for 5
hr. The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2. The organic layer
was washed with H.sub.2O, followed by brine solution and dried over
anhydrous Na.sub.2SO.sub.4. The organic layer concentrated in vacuo
to give 47 (5 g, 83% yield) as an off white solid. This was used in
the next step as is without any further purification. LCMS m/z 321
[M+H].
##STR00312##
N-(1-((2,2-Difluorobenzo[d][1,3]dioxol-5-yl)sulfonyl)piperidin-4-yl)-6-me-
thyl-3-nitropyridin-2-amine (48)
[0165] Et.sub.3N (2.8 mL, 20.31 mmol) was added to a stirred
solution of 47 (5 g, 15.62 mmol) and 9 (2.6 g, 15.62 mmol) in
anhydrous DMSO (26 mL) at rt. The resulting reaction mixture was
stirred at 110.degree. for 4 hr. After the reaction was complete,
it was cooled to rt and poured into brine solution and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over anhydrous Na.sub.2SO.sub.4 and concentrated
in vacuo to give 48 (2.5 g, 85% yield) as a yellow solid. This was
used in the next step as is without any further purification. LCMS
m/z 457 [M+H].
##STR00313##
N.sup.2-(1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulfonyl)piperidin-4-yl-
)-6-methylpyridine-2,3-diamine (49)
[0166] A mixture of 48 (2.5 g, 5.4774 mmol), iron powder (1.52 g,
27.38 mmol) and NH.sub.4Cl (0.43 g, 8.216 mmol) in EtOH (25 mL) and
H.sub.2O (7 mL) was refluxed for 2 hr. The reaction mixture was
filtered through a pad of Celite and the filtrate was concentrated
to remove the EtOH. The remaining aqueous mixture was diluted with
H.sub.2O and extracted with EtOAc. The organic layer was dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give 49
(1.5 g, 64% yield) as a brown liquid which was used in the next
step without any further purification. LCMS m/z 427 [M+H].
##STR00314##
2-(3-Chloropyridin-4-yl)-3-(1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulf-
onyl)piperidin-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (51)
[0167] A solution of 49 (0.100 g, 0.234 mmol) and 50 (0.0332 g,
0.2343 mmol) in HOAc (3 mL) was heated refluxed for 6 hr. After the
reaction was complete, the reaction mixture was cooled to rt
basified with saturated NaHCO.sub.3 solution. The resulting mixture
was extracted with EtOAc and the organic layer was dried over
anhydrous Na.sub.2SO.sub.4 then concentrated in vacuo to give the
crude product as a yellow solid. This was purified by flash column
chromatography using 100-200 mesh silica gel. The desired product
was eluted in 50% EtOAc in pet-ether to obtain 0.015 g (12%) of
pure 51 as an off white solid. .sup.1H NMR (DMSO-d.sub.6) .delta.
8.88-8.85 (d, J=9.9 Hz, 1H), 8.73-8.71 (d, J=4.8 Hz, 1H), 8.04-8.01
(d, J=8.1 Hz, 1H), 7.85 (s, 1H), 7.76-7.65 (m, 3H), 7.25-7.23 (d,
J=8.1 Hz, 1H), 3.98-3.87 (m, 1H), 3.77-3.73 (d, J=11.1 Hz, 2H),
2.96-288 (t, J=11.4 Hz, 2H), 2.63-2.62 (d, J=4.8 Hz, 2H), 2.42 (s,
3H), 1.96-1.89 (t, J=10.8 Hz, 2H). LCMS m/z 548 [M+H-1], 550
[M+H+1].
Example 14
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-(3-chloropydridin-
-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (56)
##STR00315##
[0168] tert-Butyl
(1-(benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)carbamate
(52)
[0169] NaH (0.23 g, 4.9939 mmol) was added to a stirred solution of
38 (0.5 g, 2.49 mmol) in anhydrous THF (15 mL) at 0.degree. C. The
reaction mixture was stirred for 15 min, then 7 (0.55 g, 2.49 mmol)
was added dropwise. The resulting mixture was warmed to rt and
stirred at rt for 1 hr. Ice-cold H.sub.2O was added and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over Na.sub.2SO.sub.4 and concentrated in vacuo
to give the product as an off white solid. This was washed with
n-hexane to give pure 52 (0.8 g, 83% yield) as an off white solid.
LCMS m/z 385 [M+H].
##STR00316##
1-(Benzo[d][1,3]dioxol-5-yl)sulfonyl)piperidin-4-amine (53)
[0170] TFA (2 mL) was added to a stirred solution of 52 (0.8 g,
2.08 mmol) in anhydrous CH.sub.2Cl.sub.2 (10 mL) at 0.degree. C.
The reaction mixture was allowed to warm to rt and stirred for 5
hr. The reaction mixture was basified with saturated NaHCO.sub.3
solution, then extracted with CH.sub.2Cl.sub.2. The organic layer
was washed with H.sub.2O, followed by brine solution and dried over
anhydrous Na.sub.2SO.sub.4. The organic layer concentrated in vacuo
to give 53 (0.4 g, 68% yield) as an off white solid. This was used
in the next step as is without any further purification. LCMS m/z
285 [M+H].
##STR00317##
N-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-6-methyl-3-nitropy-
ridin-2-amine (54)
[0171] Et.sub.3N (0.25 mL, 1.828 mmol) was added to a stirred
solution of 53 (0.4 g, 1.406 mmol) and 9 (0.24 g, 1.406 mmol) in
anhydrous DMSO (15 mL) at rt. The resulting reaction mixture was
stirred at 150.degree. for 4 hr. After the reaction was complete,
it was cooled to rt and poured into brine solution and the
resulting mixture was extracted with EtOAc. The combined organic
layers were dried over anhydrous Na.sub.2SO.sub.4 and concentrated
in vacuo to give the crude product as a yellow solid. This was
washed with Et.sub.2O and n-hexane (1:10) to give 0.5 g (85% yield)
of 54 as a yellow solid. LCMS m/z 421 [M+H].
##STR00318##
N.sup.2-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-6-methylpyri-
dine-2,3-diamine (55)
[0172] A mixture of 54 (0.5 g, 1.233 mmol), iron powder (0.34 g,
6.166 mmol) and NH.sub.4Cl (0.099 g, 1.849 mmol) in EtOH (10 mL)
and H.sub.2O (3 mL) was refluxed for 2 hr. The reaction mixture was
filtered through a pad of Celite and the filtrate was concentrated
to remove the EtOH. The remaining aqueous mixture was diluted with
H.sub.2O and extracted with EtOAc. The organic layer was dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give 55
(0.15 g, 31% yield) as a brown solid which was used in the next
step without any further purification. LCMS m/z 391 [M+H].
##STR00319##
3-(1-(Benzo[d][1,3]dioxol-5-ylsulfonyl)piperidin-4-yl)-2-(3-chloropydridi-
n-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (56)
[0173] A solution of 55 (0.075 g, 0.192 mmol) and 50 (0.0272 g,
0.192 mmol) in HOAc (3 mL) was heated refluxed for 6 hr. After the
reaction was complete, the reaction mixture was cooled to rt
basified with saturated NaHCO.sub.3 solution. The resulting mixture
was extracted with EtOAc and the organic layer was dried over
anhydrous Na.sub.2SO.sub.4 then concentrated in vacuo to give the
crude product as a yellow solid. This was purified by flash column
chromatography using 100-200 mesh silica gel. The desired product
was eluted in 50% EtOAc in pet-ether to obtain 0.011 g (11%) of
pure 56 as a pale yellow solid. .sup.1H NMR (DMSO-d.sub.6) .delta.
8.84 (s, 1H), 8.70-8.68 (d, J=4.8 Hz, 1H), 8.03-8.01 (d, J=8.1 Hz,
1H), 7.68-7.66 (d, J=4.8 Hz, 1H), 7.29-7.21 (m, 3H), 7.13-7.10 (d,
J=8.4 Hz, 1H), 6.17 (s, 2H), 3.98 (br s, 1H), 3.73-3.69 (d, J=11.1
Hz, 2H), 2.86 (br s, 2H), 2.64 (s, 3H), 2.38-2.26 (m, 2H),
1.91-1.88 (d, J=11.4 Hz, 2H). LCMS m/z 512 [M+H-1], 514
[M+H+1].
Example 15
2-(2-Chloropyridin-3-yl)-3-(1-((2,2-difluorobenzo[d][1,3]dioxol-5-yl)sulfo-
nyl)piperidin-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine (58)
##STR00320##
[0174]
2-(2-Chloropyridin-3-yl)-3-(1-((2,2-difluorobenzo[d][1,3]dioxol-5-y-
l)sulfonyl)piperidin-4-yl)-5-methyl-3H-imidazo[4,5-b]pyridine
(58)
[0175] A solution of 49 (0.100 g, 0.234 mmol) and 57 (0.0332 g,
0.2343 mmol) in HOAc (3 mL) was refluxed for 6 hr. After the
reaction was complete, the reaction mixture was cooled to rt
basified with saturated NaHCO.sub.3 solution. The resulting mixture
was extracted with EtOAc and the organic layer was dried over
anhydrous Na.sub.2SO.sub.4 then concentrated in vacuo to give the
crude product as a yellow solid. This was purified by preparative
HPLC to give 0.014 g (12%) of pure 58 as an off white solid.
.sup.1H NMR (DMSO-d.sub.6) .delta. 8.61-8.64 (dd, J=11.4 Hz, 1H),
8.10-8.12 (d, J=7.2 Hz, 1H), 7.99-8.01 (d, J=8 Hz, 1H), 7.84 (s,
1H), 7.57-7.65 (m, 3H), 7.22-7.23 (d, J=7.6 Hz, 1H), 4.01 (m, 1H),
3.74-3.78 (m, 2H), 2.92-3.01 (m, 2H), 2.63, (s, 3H), 2.45 (m, 2H),
1.91 (m, 2H). LCMS m/z 548 [M+H-1], 550 [M+H+1].
Example 175
3-(2-chlorophenyl)-1-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-1-(6-meth-
ylpyridin-2-yl)urea (64)
##STR00321##
[0176] tert-Butyl
4-((6-methylpyridin-2-yl)amino)piperidine-1-carboxylate (60)
[0177] In a microwave vessel 59 (1.8 mL, 16.47 mmol), 2 (3.910 g,
19.52 mmol), BINAP (96 mg, 0.154 mmol) and t-BuONa (1.896 g, 19.73
mmol) were combined with 1,4-dioxane (10 mL). N.sub.2 was bubbled
through this heterogeneous mixture for 5 minutes and Pd(OAc).sub.2
(35 mg, 0.156 mmol) was added. This reaction mixture was irradiated
in the microwave (125.degree., 15 min) then diluted with brine and
extracted with EtOAc (3.times.). The combined organic extracts were
dried over anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to
give 3.273 g of 60 (65% yield) as an orange solid. This material
was carried on without further purification. .sup.1H NMR
(CDCl.sub.3) .delta. 7.31 (t, J=7.81, 1H), 6.42 (d, J=7.32 Hz, 1H),
6.17 (d, J=8.30 Hz, 1H), 4.38 (d, J=7.81 Hz, 1H), 4.08-3.92 (m,
2H), 3.69-3.58 (m, 1H), 2.94 (br s, 2H), 2.34 (s, 3H), 2.05-1.96
(m, 2H), 1.45 (s, 9H), 1.35 (d, J=9.77 Hz, 2H).
##STR00322##
6-Methyl-N-(piperidin-4-yl)pyridin-2-amine (61)
[0178] TFA (10 mL) was added to a stirred solution of 60 (3.273 g,
11.23 mmol) in anhydrous CH.sub.2Cl.sub.2 (25 mL) at rt. The
resulting orange solution was stirred at rt for 90 min and then
concentrated in vacuo to give a yellow oil. This was taken up in 1M
HCl and extracted with CH.sub.2Cl.sub.2 (3.times.) then the pH of
the aqueous layer was adjusted to 12 (litmus) with solid KOH and
extracted again with CH.sub.2Cl.sub.2 (3.times.). The combined
basic organic extracts were dried anhydrous Na.sub.2SO.sub.4 and
concentrated in vacuo to give 1.819 g (85% yield) of pure 61 as an
off-white solid This was used in the next step without further
purification. .sup.1H NMR (CDCl.sub.3) .delta. 7.32 (t, J=7.81 Hz,
1H), 6.42 (d, J=7.32 Hz, 1H), 6.18 (d, J=8.30 Hz, 1H), 4.44 (d,
J=7.81 Hz, 1H), 3.58-3.49 (m, 1H), 3.11 (dt, J=3.54, 12.94 Hz, 2H),
2.66-2.77 (m, 2H), 2.35 (s, 3H), 2.08-2.00 (m, 2H), 1.42-1.30 (m,
2H).
##STR00323##
N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-6-methylpyridin-2-amine
(62)
[0179] A solution of 61 (521 mg, 2.72 mmol)) and 21 (0.55 mL, 3.07
mmol) in pyridine (5 mL) was heated at 80.degree. for 3 hr. The
reaction was allowed to cool to rt then poured into H.sub.2O. The
solid was collected and washed with H.sub.2O (3.times.) and dried.
It was then taken up in CH.sub.2Cl.sub.2 and washed with brine
(3.times.). The combined organic extracts were dried over anhydrous
Na.sub.2SO.sub.4 and concentrated in vacuo to give a crude white
solid. This was taken up in CHCl.sub.3 and purified by flash
chromatography on silica gel. The desired product was collected to
give 0.763 g (78% yield) of pure 62 as a white solid. .sup.1H NMR
(CDCl.sub.3) .delta. 1.33-1.27 (m, 3H), 1.65-1.55 (m, 3H),
2.14-2.07 (m, 2H), 2.33 (s, 3H), 2.68-2.61 (m, 2H), 2.76 (q, J=7.65
Hz, 2H), 3.63-3.53 (m, 3H), 4.33-4.26 (m, 1H), 6.12 (d, J=8.30 Hz,
1H), 6.43 (d, J=7.32 Hz, 1H), 7.32-7.27 (m, 1H), 7.37 (d, J=8.30
Hz, 2H), 7.71-7.67 (m, 7H). LCMS m/z (ES+) 361.
##STR00324##
3-(2-chlorophenyl)-1-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-1-(6-met-
hylpyridin-2-yl)urea (64)
[0180] A solution of 62 (52 mg, 0.145 mmol) and 63 (25 .mu.L, 0.207
mmol) in pyridine (700 .mu.L) was heated at 40.degree. for 16 hr.
Additional 63 (0.1 mL) was added and the reaction was heated at
60.degree. for 48 hr, after which it was diluted with H.sub.2O and
extracted with EtOAc (3.times.). The combined organic extracts were
washed with brine then dried over anhydrous Na.sub.2SO.sub.4 and
concentrated in vacuo to give a colorless oil. This was taken up in
CHCl.sub.3, the ppt filtered and the filtrate was purified with
flash chromatography on silica gel, eluting with hexane/EtOAc. The
desired fractions were concentrated in vacuo to give 0.038 g (51%
yield) of pure 64. .sup.1H NMR (CDCl.sub.3) .delta. ppm 1.33-1.27
(m, 3H), 1.86 (dq, J=12.45, 4.15 Hz, 2H), 2.00 (dd, J=11.72, 1.95
Hz, 2H), 2.37 (dt, J=11.96, 2.44 Hz, 2H), 2.75 (q, J=7.81 Hz, 2H),
3.87 (dt, J=11.72, 1.95 Hz, 2H), 4.33 (tt, J=12.33, 3.54 Hz, 1H),
6.90 (dt, J=7.81, 1.47 Hz, 1H), 7.05 (d, J=7.81 Hz, 1H) 7.25-7.16
(m, 2H), 7.36 (d, J=8.30 Hz, 2H), 7.68-7.63 (m, 2H), 7.74 (t,
J=7.81 Hz, 1H), 8.12 (s, 3.1), 8.18 (dd, J=8.55, 1.71 Hz, 1H). LCMS
m/z (ES+) 514.
Example 207
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(4-methoxyphenyl)-
benzamide (70)
##STR00325##
[0181] 1-((4-Ethylphenyl)sulfonyl)piperidin-4-one (66)
[0182] A solution of 21 (2.22 mL, 13.76 mmol) in CH.sub.2Cl.sub.2
(8.0 mL) was added to a mixture of 65 (2.0 g, 13.11 mmol) and
K.sub.2CO.sub.3 (4.35 g, 31.5 mmol) in H.sub.2O (13.3 mL) and
CH.sub.2Cl.sub.2 at rt. The resulting mixture was stirred at rt for
48 hr, then extracted with CH.sub.2Cl.sub.2, then saturated aqueous
NaHCO.sub.3 solution. The combined organic layers were dried over
MgSO.sub.4 and evaporated in vacuo to give 3.39 g (97% yield) of 66
as a white solid. This material was used without purification in
the next step. .sup.1H NMR (CDCl.sub.3) .delta. 7.70 (d, J=8.30 Hz,
2H), 7.37 (d, J=8.30 Hz, 2H), 3.39 (t, J=6.10 Hz, 4H), 2.73 (q,
J=7.65 Hz, 2H), 2.54 (t, J=6.10 Hz, 4H), 1.27 (t, J=7.81 Hz, 3H).
LCMS m/z 268 [M+H].
##STR00326##
1-((4-Ethylphenyl)sulfonyl)-N-(4-methoxyphenyl)piperidin-4-amine
(68)
[0183] A mixture of 66 (0.535 g, 2.00 mmol), 67 (0.123 g, 1.00
mmol), NaBH(OAc).sub.3 (0.530 g, 2.50 mmol) and HOAc (0.17 mL, 3.00
mmol) in DCE (2.00 mL) was microwaved at 140.degree. for 10
minutes. The resulting mixture was quenched with saturated aqueous
NaHCO.sub.3 solution then extracted with CH.sub.2Cl.sub.2. The
combined extracts were dried over MgSO.sub.4 and concentrated in
vacuo to give the crude product. This was purified by flash
chromatography on silica gel, eluting with 50% EtOAc in hexane to
give 0.328 g (88%) of pure 68. LCMS m/z 375 [M+H].
##STR00327##
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(4-methoxyphenyl-
)benzamide (70)
[0184] A mixture of 68 (0.179 g, 0.477 mmol), 69 (0.125 g, 0.715
mmol), and Et.sub.3N (0.33 mL, 2.383 mmol) in anhydrous
CH.sub.2Cl.sub.2 (0.95 mL) was stirred at rt for 16 hr. The
reaction was quenched with saturated aqueous NaHCO.sub.3 solution
then extracted with CH.sub.2Cl.sub.2. The combined extracts were
dried over MgSO.sub.4 and concentrated in vacuo to give the crude
product. This was purified by flash chromatography on silica gel,
eluting with 50% EtOAc in hexane to give 0.150 g (62%) of pure 70.
.sup.1H NMR (CDCl.sub.3) .delta. 7.65 (d, J=8.30 Hz, 2H), 7.35 (d,
J=8.30 Hz, 2H), 7.15 (d, J=7.81 Hz, 1H), 7.10-6.93 (m, 5H), 6.67
(d, J=7.81 Hz, 2H), 4.75-4.60 (m, 1H), 3.86 (d, J=10.25 Hz, 2H),
3.72 (s, 3H), 2.75 (q, J=7.65 Hz, 2H), 2.42 (t, J=11.96 Hz, 2H),
1.97 (d, J=11.72 Hz, 2H), 1.66-1.50 (m, 2H), 1.29 (t, J=7.57 Hz,
3H). LCMS m/z 513 [M+H-1], 515 [M+H+1].
Example 214
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(4-methoxyphenyl)-
benzothioamide (71)
##STR00328##
[0185]
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(4-methoxy-
phenyl)benzothioamide (71)
[0186] A mixture of 70 (0.122 g, 0.237 mmol) and P.sub.4S.sub.10
(0.053 g, 0.119 mmol) in anhydrous CH.sub.2Cl.sub.2 (2.3 mL) was
microwaved at 120.degree. for 70 min. The reaction mixture was
quenched with H.sub.2O and after stirring for 10 minutes, extracted
with CH.sub.2Cl.sub.2. The extract was dried over MgSO.sub.4 and
concentrated in vacuo to give crude product. This was purified by
flash chromatography on silica gel, eluting with 40% EtOAc in
hexane to give 0.054 g (43%) of pure 71. .sup.1H NMR (CDCl.sub.3)
.delta. 7.65 (d, J=8.30 Hz, 2H), 7.36 (d, J=8.30 Hz, 2H), 7.19 (d,
J=8.79 Hz, 1H), 7.06 (d, J=7.81 Hz, 1H), 7.00 (br. s., 2H),
6.98-6.92 (m, 1H), 6.79-6.62 (m, 3H), 5.60-5.46 (m, 1H), 3.94-3.81
(m, 2H), 3.72 (s, 3H), 2.75 (q, J=7.65 Hz, 2H), 2.43 (q, J=9.77 Hz,
2H), 2.26 (d, J=12.70 Hz, 1H), 2.10-2.00 (m, 1H), 1.69-1.59 (m,
J=3.91, 12.21 Hz, 1H), 1.55-1.47 (m, 1H), 1.30 (t, J=7.57 Hz, 3H).
m/z 529 [M+H-1], 531 [M+H+1].
Example 220
2-Chloro-N-(1-((2-methylbenzo[d]oxazol-6-yl)sulfonyl)piperidin-4-yl)-N-(m--
tolyl)benzenesulfonamide (80)
##STR00329##
[0187] 2-Chloro-N-(6-methylpyridin-2-yl)benzenesulfonamide (74)
[0188] To a stirred solution of 72 (0.50 g, 4.62 mmol) in pyridine
(1 mL) was added 73 (0.97 g, 4.62 mmol) at rt. The resulting
mixture was stirred at 80.degree. for 2 hr. The reaction mixture
was cooled to rt. and ice-cold H.sub.2O was added. The solid that
separated was collected and dried in vacuo to give 0.80 g (61%
yield) of 74 as an off white solid. LCMS m/z 283 [M+H-1], 285
[M+H+1].
##STR00330##
tert-Butyl
4-((2-chloro-N-(6-methylpyridin-2-yl)phenyl)sulfonamido)piperidine-1-carb-
oxylate (76)
[0189] To a stirred solution of 75 (0.38 g, 1.88 mmol) in anhydrous
THF (15 mL) was added 74 (0.53 g, 1.88 mmol) and then Ph.sub.3P
(0.74 g, 2.83 mmol) at rt. The reaction mixture was cooled to
0.degree. and stirred for 10 min, then DIAD (0.55 mL) was added
dropwise over a period of 5 min. The reaction mixture was warmed to
rt and stirred at rt for 48 hr. The reaction mixture was quenched
by the addition of ice-cold H.sub.2O and the resulting mixture was
extracted with EtOAc (2.times.20 mL). The combined organic layers
were dried over anhydrous Na.sub.2SO.sub.4 and concentrated in
vacuo to give 1.00 g of crude product 76, which was used in the
next step without any further purification.
##STR00331##
2-Chloro-N-(6-methylpyridin-2-yl)-N-(piperidin-4-yl)benzenesulfonamide
(77)
[0190] To a solution of 76 (0.50 g, 1.07 mmol) in anhydrous
CH.sub.2Cl.sub.2 (10 mL) was added TFA (0.33 mL, 3.47 mmol) at
0.degree.. The reaction mixture was warmed to rt and stirred at rt
for 2 hr. The reaction mixture was basified with saturated aqueous
Na.sub.2CO.sub.3 solution and extracted with CH.sub.2Cl.sub.2
(2.times.25 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to obtain the
crude compound. This was purified by flash chromatography, eluting
with 20% MeOH in CH.sub.2Cl.sub.2 to give 0.100 g ((26% yield) of
pure 77 as an off-white solid. LCMS m/z 366 [M+H-1], 368
[M+H+1].
##STR00332##
2-Methylbenzo[d]oxazole-6-sulfonyl chloride (78)
[0191] To a stirred solution of chlorosulfonic acid (5 mL) was
added compound 77 (2.00 g, 15.02 mmol) slowly in portions over a
period of 30 min. at rt. The resulting mixture was heated at
75.degree. for 16 hr. The reaction mixture was cooled to rt and
quenched by the addition of ice-cold H.sub.2O, and the solid that
separated was collected and dried in vacuo to give 0.95 g (27%
yield) of 78 as a white solid. This compound was use in the next
step without further purification.
##STR00333##
2-Chloro-N-(1-((2-methylbenzo[d]oxazol-6-yl)sulfonyl)piperidin-4-yl)-N-(6-
-methylpyridin-2-yl)benzenesulfonamide (80)
[0192] A solution of 79 (0.05 g, 0.13 mmol), 78 (0.03 g, 0.13 mmol)
and DIPEA (0.04 mL, 0.27 mmol) in anhydrous THF was stirred at rt
for 2 h. The reaction mixture was quenched by the addition of
H.sub.2O and the resulting mixture was extracted with EtOAc
(2.times.20 mL). The organic layers were combined, dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude 80. This was washed with Et.sub.2O to give 0.023 g (30%
yield) of pure 80 as an off white solid. LCMS m/z 561 [M+H-1], 563
[M+H+1]. .sup.1H NMR (DMSO-d.sub.6) .delta. 8.02 (d, J=1.7 Hz, 1H),
7.97-7.89 (m, 1H), 7.88-7.78 (m, 1H), 7.65 (m, 4H), 7.52-7.43 (m,
1H), 7.19 (d, J=8.1 Hz, 1H), 6.80 (d, J=7.8 Hz, 1H), 4.12 (s, 1H),
3.72 (d, J=11.6 Hz, 2H), 2.70 (s, 3H), 2.5-2.49 (m, 2H), 2.31 (s,
3H), 1.82 (d, J=12.3 Hz, 2H), 1.45-1.40 (m, 2H).
Example 222
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(6-methoxypyridin-
-2-yl)benzenesulfonamide (85)
##STR00334##
[0193] 2-Chloro-N-(6-methoxypyridin-2-yl)benzenesulfonamide
(82)
[0194] To a stirred solution of 81 (0.50 g, 4.02 mmol) in pyridine
(1 mL) was added 73 (0.84 g, 4.02 mmol) at rt. The resulting
mixture was stirred at 80.degree. for 2 hr. The reaction mixture
was cooled to rt. and ice-cold H.sub.2O was added. The solid that
separated was collected and dried in vacuo to give 0.80 g (67%
yield) of 82 as an off white solid. .sup.1H NMR (CDCl.sub.3)
.delta. 8.17 (d, J=7.2 Hz, 1H), 7.49 (d, J=4 Hz, 2H), 7.43 (dd,
J=8.0 Hz, J=8.0 Hz, 2H), 7.40-7.37 (m, 1H), 6.72 (d, J=8.0 Hz, 1H),
6.39 (d, J=8.4 Hz, 1H), 3.75 (s, 3H).
##STR00335##
tert-Butyl
4-((2-chloro-N-(6-methoxypyridin-2-yl)phenyl)sulfonamido)piperidine-1-car-
boxylate (83)
[0195] To a stirred solution of 75 (0.380 g, 1.88 mmol) in
anhydrous THF (15 mL) was added 82 (0.56 g, 1.88 mmol) and then
Ph.sub.3P (0.74 g, 2.83 mmol) at rt. The reaction mixture was
cooled to 0.degree. and stirred for 10 min, then DIAD (0.55 mL) was
added dropwise over a period of 5 min. The reaction mixture was
warmed to rt and stirred at rt for 48 hr. The reaction mixture was
quenched by the addition of ice-cold H.sub.2O and the resulting
mixture was extracted with EtOAc (2.times.20 mL). The combined
organic layers were dried over anhydrous Na.sub.2SO.sub.4 and
concentrated in vacuo to give 1.00 g of crude product 83 which was
used in the next step without any further purification. LCMS m/z
482 [M+H-1], 484 [M+H+1].
##STR00336##
2-Chloro-N-(6-methoxypyridin-2-yl)-N-(piperidin-4-yl)benzenesulfonamide
(84)
[0196] To a solution of 83 (0.50 g, 1.03 mmol) in anhydrous
CH.sub.2Cl.sub.2 (10 mL) was added TFA (0.32 mL, 3.33 mmol) at
0.degree.. The reaction mixture was warmed to rt and stirred at rt
for 2 hr. The reaction mixture was basified with saturated aqueous
Na.sub.2CO.sub.3 solution and extracted with CH.sub.2Cl.sub.2
(2.times.25 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to obtain the
crude compound. This was purified by flash chromatography, eluting
with 20% MeOH in CH.sub.2Cl.sub.2 to give 0.100 g (26% yield) of
pure 84 as an off-white solid. LCMS m/z 382 [M+H-1], 384
[M+H+1].
##STR00337##
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(6-methoxypyridi-
n-2-yl)benzenesulfonamide (85)
[0197] A solution of 84 (0.10 g, 0.26 mmol), 21 (0.53 g, 0.26 mmol)
and DIPEA (0.07 mL, 0.52 mmol) in anhydrous THF (5 mL) was stirred
at rt for 2 h. The reaction mixture was quenched by the addition of
H.sub.2O and the resulting mixture was extracted with EtOAc
(2.times.20 mL). The organic layers were combined, dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude product 85. This was washed with Et.sub.2O to give 0.066 g
(46% yield) of pure 85 as an off white solid. LCMS m/z 550 [M+H-1],
552 [M+H+1]. .sup.1H NMR (DMSO-d.sub.6) .delta. 7.95 (dd, J=7.9,
1.6 Hz, 1H), 7.76-7.57 (m, 5H), 7.51-7.45 (m, 1H), 7.42 (d, J=8.0
Hz, 2H), 6.81 (d, J=8.2 Hz, 1H), 6.71 (d, J=7.5 Hz, 1H), 4.19 (m,
1H), 3.67 (d, J=12.1 Hz, 2H), 3.52 (s, 3H), 2.70 (q, J=7.7 Hz, 2H),
2.50 (m, 2H), 1.90 (d, J=12.4 Hz, 2H), 1.52 (q, J=11.6 Hz, 2H),
1.21 (t, J=7.6 Hz, 3H).
Example 210
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(pyridin-2-yl)ben-
zenesulfonamide (90)
##STR00338##
[0198] 2-Chloro-N-(pyridin-2-yl)benzenesulfonamide (87)
[0199] To a stirred solution of 86 (0.25 g, 2.65 mmol) in pyridine
(0.5 mL) was added 73 (0.55 g, 2.65 mmol) at rt. The resulting
mixture was stirred at 80.degree. for 2 hr. The reaction mixture
was cooled to rt. and ice-cold H.sub.2O was added. The solid that
separated was collected and dried in vacuo to give 0.51 g (72%
yield) of 87 as an off white solid. LCMS m/z 269 [M+H-1], 271
[M+H+1].
##STR00339##
tert-Butyl
4-((2-chloro-N-(pyridin-2-yl)phenyl)sulfonamido)piperidine-1-carboxylate
(88)
[0200] To a stirred solution of 75 (0.40 g, 1.98 mmol) in anhydrous
THF (15 mL) was added 87 (0.53 g, 1.98 mmol) and then Ph.sub.3P
(0.74 g, 2.83 mmol) at rt. The reaction mixture was cooled to
0.degree. and stirred for 10 min, then DIAD (0.55 mL) was added
dropwise over a period of 5 min. The reaction mixture was warmed to
rt and stirred at rt for 48 hr. The reaction mixture was quenched
by the addition of ice-cold H.sub.2O and the resulting mixture was
extracted with EtOAc (2.times.20 mL). The combined organic layers
were dried over anhydrous Na.sub.2SO.sub.4 and concentrated in
vacuo to give 1.00 g of crude product 88 which was used in the next
step without any further purification.
##STR00340##
2-Chloro-N-(piperidin-4-yl)-N-(pyridin-2-yl)benzenesulfonamide
(89)
[0201] To a solution of 88 (0.60 g, 1.33 mmol) in anhydrous
CH.sub.2Cl.sub.2 (10 mL) was added TFA (0.41 mL, 4.27 mmol) at
0.degree.. The reaction mixture was warmed to rt and stirred at rt
for 2 hr. The reaction mixture was basified with saturated aqueous
Na.sub.2CO.sub.3 solution and extracted with CH.sub.2Cl.sub.2
(2.times.25 mL). The combined organic layers were dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to obtain the
crude compound. This was purified by flash chromatography, eluting
with 20% MeOH in CH.sub.2Cl.sub.2 to give 0.10 g (22% yield) of
pure 89 as an off-white solid. LCMS m/z 352 [M+H-1], 354
[M+H+1].
##STR00341##
2-Chloro-N-(1-((4-ethylphenyl)sulfonyl)piperidin-4-yl)-N-(pyridin-2-yl)be-
nzenesulfonamide (90)
[0202] A solution of 89 (0.10 g, 0.28 mmol), 21 (0.53 g, 0.26 mmol)
and DIPEA (0.07 mL, 0.56 mmol) in anhydrous THF (5 mL) was stirred
at rt for 2 h. The reaction mixture was quenched by the addition of
H.sub.2O and the resulting mixture was extracted with EtOAc
(2.times.20 mL). The organic layers were combined, dried over
anhydrous Na.sub.2SO.sub.4 and concentrated in vacuo to give the
crude product 90. This was washed with Et.sub.2O to give 0.132 g
(90% yield) of pure 90 as an off white solid. LCMS m/z 520 [M+H-1],
522 [M+H+1]. .sup.1H NMR (DMSO-d.sub.6) .delta. 8.42-8.44 (m, 1H),
7.94 (dd, J=7.9, 1.5 Hz, 1H), 7.84 (dt, J=7.7, 2.1 Hz, 1H),
7.71-7.62 (m, 2H), 7.61-7.56 (m, 2H), 7.48 (ddd, J=8.3, 7.0, 1.7
Hz, 1H), 7.45-7.37 (m, 3H), 7.10 (d, J=7.9 Hz, 1H), 4.31-4.00 (m,
1H), 3.65 (d, J=11.9 Hz, 2H), 2.70 (q, J=7.6 Hz, 2H), 2.47-2.26 (m,
2H), 1.87 (d, J=12.3 Hz, 2H), 1.49 (dt, J=13.4, 9.4 Hz, 2H), 1.21
(t, J=7.6 Hz, 3H).
TABLE-US-00002 TABLE 2 Additional examples were prepared as
according to the described methods above, or similar methods, or
were purchased from commercial vendors. No. Example LCMS m/z [M +
H] SCHEME 1. ##STR00342## Example 1 m/z 497 [M + H - 1], 499 [M + H
+ 1] 1 2. ##STR00343## Example 2 m/z 511 [M + H - 1], 513 [M + H +
1] 1 3. ##STR00344## Example 3 m/z 497 [M + H - 1], 499 [M + H + 1]
1 4. ##STR00345## Example 4 m/z 447 [M + H] 1 5. ##STR00346##
Example 5 m/z 463 [M + H] 1 6. ##STR00347## Example 6 m/z 517 [M +
H - 1], 519 [M + H + 1], 521 [M + H + 3] 2 7. ##STR00348## Example
7 m/z 515 [M + H - 1], 517 [M + H + 1], 519 [M + H + 3] 1 8.
##STR00349## Example 8 m/z 515 [M + H - 1], 517 [M + H + 1] 1 9.
##STR00350## Example 9 m/z 499 [M + H - 1], 501 [M + H + 1] 2 10.
##STR00351## Example 10 m/z 501 [M + H - 1], 503 [M + H + 1] 505 [M
+ H + 3] 1 11. ##STR00352## Example 11 m/z 501 [M + H - 1], 503 [M
+ H + 1] 1 12. ##STR00353## Example 12 m/z 551 [M + H - 1], 553 [M
+ H + 1], 555 [M + H + 3], 557 [M + H + 5] 3 13. ##STR00354##
Example 13 m/z 548 [M + H - 1], 550 [M + H + 1] 3 14. ##STR00355##
Example 14 m/z 512 [M + H - 1], 514 [M + H + 1] 3 15. ##STR00356##
Example 15 m/z 548 [M + H - 1], 550 [M + H + 1] 3 16. ##STR00357##
Example 16 m/z 483 [M + H - 1], 485 [M + H + 1] 1 17. ##STR00358##
Example 17 m/z 433 [M + H] Commercial 18. ##STR00359## Example 18
m/z 467 [M + H] 1 19. ##STR00360## Example 19 m/z 449 [M + H] 1 20.
##STR00361## Example 20 m/z 467 [M + H - 1], 469 [M + H + 1] 1 21.
##STR00362## Example 21 m/z 447 [M + H - 1], 449 [M + H + 1] 1a 22.
##STR00363## Example 22 m/z 517 [M + H - 1], 519 [M + H + 1], 521
[M + H + 3] 2 23. ##STR00364## Example 23 m/z 497 [M + H - 1], 499
[M + H + 1] 2 24. ##STR00365## Example 24 m/z 497 [M + H - 1], 499
[M + H + 1] 2 25. ##STR00366## Example 25 m/z 475 [M + H - 1], 477
[M + H + 1] 2 26. ##STR00367## Example 26 m/z 497 [M + H - 1], 499
[M + H + 1] 1 27. ##STR00368## Example 27 m/z 484 [M + H - 1], 486
[M + H + 1] 2 28. ##STR00369## Example 28 m/z 484 [M + H - 1], 486
[M + H + 1] 2 29. ##STR00370## Example 29 m/z 517 [M + H - 1], 519
[M + H + 1], 521 [M + H + 3] 2 30. ##STR00371## Example 30 m/z 497
[M + H - 1], 499 [M + H + 1] 2 31. ##STR00372## Example 31 m/z 489
[M + H - 1], 491 [M + H + 1] 2 32. ##STR00373## Example 32 m/z 473
[M + H - 1], 475 [M + H + 1] 2 33. ##STR00374## Example 33 m/z 523
[M + H - 1], 525 [M + H + 1] 2 34. ##STR00375## Example 34 m/z 523
[M + H - 1], 525 [M + H + 1] 2 35. ##STR00376## Example 35 m/z 517
[M + H - 1], 519 [M + H + 1], 521 [M + H + 3] 3 36. ##STR00377##
Example 36 m/z 517 [M + H - 1], 519 [M + H + 1], 521 [M + H + 3] 3
37. ##STR00378## Example 37 m/z 483 [M + H - 1], 485 [M + H + 1] 1
38. ##STR00379## Example 38 m/z 534 [M + H - 1], 536 [M + H + 1] 1b
39. ##STR00380## Example 39 m/z 533 [M + H - 1], 535 [M + H + 1] 3a
40. ##STR00381## Example 40 m/z 534 [M + H - 1], 536 [M + H + 1] 3a
41. ##STR00382## Example 41 m/z 482 [M + H - 1], 484 [M + H + 1] 3a
42. ##STR00383## Example 42 m/z 512 [M + H - 1], 514 [M + H + 1] 3a
43. ##STR00384## Example 43 m/z 549 [M + H] 1b 44. ##STR00385##
Example 44 m/z 500 [M + H - 1], 502 [M + H + 1] 1b 45. ##STR00386##
Example 45 m/z 482 [M + H - 1], 484 [M + H + 1] 3a 46. ##STR00387##
Example 46 m/z 519 [M + H - 1], 521 [M + H + 1] 3a 47. ##STR00388##
Example 47 m/z 483 [M + H] 3a 48. ##STR00389## Example 48 m/z 499
[M + H] 1b 49. ##STR00390## Example 49 m/z 551 [M + H - 1], 553 [M
+ H + 1] 1 50. ##STR00391## Example 50 m/z 508 [M + H - 1], 510 [M
+ H + 1] 1 51. ##STR00392## Example 51 m/z 478 [M + H] 3a 52.
##STR00393## Example 52 m/z 518 [M + H] 3a 53. ##STR00394## Example
53 m/z 519 [M + H - 1], 521 [M + H + 1] 1 54. ##STR00395## Example
54 m/z 548 [M + H - 1], 550 [M + H + 1] 3 55. ##STR00396## Example
55 m/z 513 [M + H - 1], 515 [M + H + 1] 1 56. ##STR00397## Example
56 m/z 520 [M + H - 1], 522 [M + H + 1] 3a 57. ##STR00398## Example
57 m/z 527 [M + H - 1], 529 [M + H + 1] 1 58. ##STR00399## Example
58 m/z 548 [M + H - 1], 550 [M + H + 1], 552 [M + H + 3] 3a 59.
##STR00400## Example 59 m/z 467 [M + H - 1], 469 [M + H + 1] 1 60.
##STR00401## Example 60 m/z 501 [M + H - 1], 503 [M + H + 1] 1 61.
##STR00402## Example 61 m/z 447 [M + H] 1 62. ##STR00403## Example
62 m/z 447 [M + H] 1 63. ##STR00404## Example 63 m/z 481 [M + H -
1], 483 [M + H + 1] 1 64. ##STR00405## Example 64 m/z 481 [M + H] 1
65. ##STR00406## Example 65 m/z 481 [M + H - 1], 483 [M + H + 1] 1
66. ##STR00407## Example 66 m/z 537 [M + H - 1], 539 [M + H + 1] 1
67. ##STR00408## Example 67 m/z 428 [M + H] 1 68. ##STR00409##
Example 68 m/z 449 [M + H] 1 69. ##STR00410## Example 69 m/z 461 [M
+ H] 1 70. ##STR00411## Example 70 m/z 510 [M + H - 1], 512 [M + H
+ 1] 1 71. ##STR00412## Example 71 m/z 478 [M + H - 1], 480 [M + H
+ 1] 1 72. ##STR00413## Example 72 m/z 409 [M + H] 1 73.
##STR00414## Example 73 m/z 463 [M + H] 1 74. ##STR00415## Example
74 m/z 517 [M + H] 1 75. ##STR00416## Example 75 m/z 473 [M + H -
1], 475 [M + H + 1] 1 76. ##STR00417## Example 76 m/z 567 [M + H -
1], 569 [M + H + 1] 1 77. ##STR00418## Example 77 m/z 501 [M + H -
1], 503 [M + H + 1] 1 78. ##STR00419## Example 78 m/z 551 [M + H -
1], 553 [M + H + 1] 1 79. ##STR00420## Example 79 m/z 541 [M + H -
1], 543 [M + H + 1] 1 80. ##STR00421## Example 80 m/z 541 [M + H -
1], 543 [M + H + 1] 1 81. ##STR00422## Example 81 m/z 482 [M + H -
1], 484 [M + H + 1] 1b 82. ##STR00423## Example 82 m/z 498 [M + H]
1b 83. ##STR00424## Example 83 m/z 531 [M + H] 1b 84. ##STR00425##
Example 84 m/z 532 [M + H] 1b 85. ##STR00426## Example 85 m/z 527
[M + H - 1], 529 [M + H + 1] 1b 86. ##STR00427## Example 86 m/z 547
[M + H - 1], 549 [M + H + 1] 3 87. ##STR00428## Example 87 m/z 593
[M + H] 1b 88. ##STR00429## Example 88 m/z 518 [M + H - 1], 520 [M
+ H + 1], 522 [M + H + 3] 3a 89. ##STR00430## Example 89 m/z 518 [M
+ H - 1], 520 [M + H + 1], 522 [M + H + 3] 3a 90. ##STR00431##
Example 90 m/z 518 [M + H - 1], 520 [M + H + 1], 522 [M + H + 3] 3a
91. ##STR00432## Example 91 m/z 482 [M + H - 1], 484 [M + H + 1] 3a
92. ##STR00433## Example 92 m/z 498 [M + H - 1], 500 [M + H + 1] 3a
93. ##STR00434## Example 93 m/z 498 [M + H - 1], 500 [M + H + 1] 3a
94. ##STR00435## Example 94 m/z 520 [M + H - 1], 522 [M + H + 1] 3a
95. ##STR00436## Example 95 m/z 493 [M + H - 1], 495 [M + H + 1] 3a
96. ##STR00437## Example 96 m/z 492 [M + H - 1], 494 [M + H + 1] 3a
97. ##STR00438## Example 97 m/z 513 [M + H] 3a 98. ##STR00439##
Example 98 m/z 482 [M + H - 1], 484 [M + H + 1] 4 99. ##STR00440##
Example 99 m/z 498 [M + H] 4 100. ##STR00441## Example 100 m/z 531
[M + H] 3a 101. ##STR00442## Example 101 m/z 512 [M + H - 1], 514
[M + H + 1] 3a 102. ##STR00443## Example 102 m/z 534 [M + H - 1],
536 [M + H + 1] 3a 103. ##STR00444## Example 103 m/z 481 [M + H -
1], 483 [M + H + 1] 4 104. ##STR00445## Example 104 m/z 497 [M + H]
4 105. ##STR00446## Example 105 m/z 500 [M + H] 3a 106.
##STR00447## Example 106 m/z 536 [M + H] 3a 107. ##STR00448##
Example 107 m/z 482 [M + H] 3a 108. ##STR00449## Example 108 m/z
499 [M + H] 3a 109. ##STR00450## Example 109 m/z 535 [M + H] 3a
110. ##STR00451## Example 110 m/z 466 [M + H] 3a 111. ##STR00452##
Example 111 m/z 484 [M + H] 3a 112. ##STR00453## Example 112 m/z
532 [M + H] 3a 113. ##STR00454## Example 113 m/z 480 [M + H] 3a
114. ##STR00455## Example 114 m/z 515 [M + H] 3a 115. ##STR00456##
Example 115 m/z 463 [M + H] 3a 116. ##STR00457## Example 116 m/z
518 [M + H] 3a
117. ##STR00458## Example 117 m/z 480 [M + H] 3a 118. ##STR00459##
Example 118 m/z 564 [M + H - 1], 566 [M + H + 1] 3a 119.
##STR00460## Example 119 m/z 518 [M + H] 3a 120. ##STR00461##
Example 120 m/z 466 [M + H] 3a 121. ##STR00462## Example 121 m/z
497 [M + H] 3a 122. ##STR00463## Example 122 m/z 495 [M + H] 3a
123. ##STR00464## Example 123 m/z 482 [M + H] 3a 124. ##STR00465##
Example 124 m/z 583 [M + H] 3a 125. ##STR00466## Example 125 m/z
585 [M + H] 3a 126. ##STR00467## Example 126 m/z 565 [M + H] 3a
127. ##STR00468## Example 127 m/z 548 [M + H] 3a 128. ##STR00469##
Example 128 m/z 501 [M + H] 3a 129. ##STR00470## Example 129 m/z
505 [M + H] 3a 130. ##STR00471## Example 130 m/z 517 [M + H] 3a
131. ##STR00472## Example 131 m/z 449 [M + H] 3a 132. ##STR00473##
Example 132 m/z 509 [M + H] 3a 133. ##STR00474## Example 133 m/z
493 [M + H] 3a 134. ##STR00475## Example 134 m/z 510 [M + H] 3a
135. ##STR00476## Example 135 m/z 500 [M + H - 1], 502 [M + H + 1]
1c 136. ##STR00477## Example 136 m/z 484 [M + H] 1b 137.
##STR00478## Example 137 m/z 534 [M + H - 1], 536 [M + H + 1] 3a
138. ##STR00479## Example 138 m/z 496 [M + H] 3a 139. ##STR00480##
Example 139 m/z 493 [M + H] 1b 140. ##STR00481## Example 140 m/z
510 [M + H] 1b 141. ##STR00482## Example 141 m/z 492 [M + H] 1b
142. ##STR00483## Example 142 m/z 491 [M + H] 1b 143. ##STR00484##
Example 143 m/z 508 [M + H] 1b 144. ##STR00485## Example 144 m/z
509 [M + H] 1b 145. ##STR00486## Example 145 m/z 535 [M + H] 1b
146. ##STR00487## Example 146 m/z 552 [M + H] 1b 147. ##STR00488##
Example 147 m/z 474 [M + H] 1b 148. ##STR00489## Example 148 m/z
493 [M + H] 1b 149. ##STR00490## Example 149 m/z 510 [M + H] 1b
150. ##STR00491## Example 150 m/z 547 [M + H] 10 151. ##STR00492##
Example 151 m/z 495 [M + H] 10 152. ##STR00493## Example 152 m/z
518 [M + H] 1b 153. ##STR00494## Example 153 m/z 562 [M + H - 1],
564 [M + H + 1] 10 154. ##STR00495## Example 154 m/z 563 [M + H -
1], 565 [M + H + 1] 10 155. ##STR00496## Example 155 m/z 510 [M + H
- 1], 512 [M + H + 1] 10 156. ##STR00497## Example 156 m/z 511 [M +
H - 1], 513 [M + H + 1] 10 157. ##STR00498## Example 157 m/z 545 [M
+ H - 1], 547 [M + H + 1], 549 [M + H + 3] 1b 158. ##STR00499##
Example 158 m/z 529 [M + H - 1], 531 [M + H + 1] 1b 159.
##STR00500## Example 159 m/z 546 [M + H - 1], 548 [M + H + 1] 1b
160. ##STR00501## Example 160 m/z 538 [M + H - 1], 540 [M + H + 1]
10 161. ##STR00502## Example 161 m/z 493 [M + H - 1], 495 [M + H +
1] 1b 162. ##STR00503## Example 162 m/z 477 [M + H] 1b 163.
##STR00504## Example 163 m/z 523 [M + H] 10 164. ##STR00505##
Example 164 m/z 540 [M + H] 10 165. ##STR00506## Example 165 m/z
532 [M + H] 1b 166. ##STR00507## Example 166 m/z 548 [M + H - 1],
550 [M + H + 1] 1b 167. ##STR00508## Example 167 m/z 496 [M + H -
1], 498 [M + H + 1] 10 168. ##STR00509## Example 168 m/z 497 [M + H
- 1], 499 [M + H + 1] 10 169. ##STR00510## Example 169 m/z 496 [M +
H] 3 170. ##STR00511## Example 170 m/z 512 [M + H - 1], 514 [M + H
+ 1] 3 171. ##STR00512## Example 171 m/z 470 [M + H] 12 172.
##STR00513## Example 172 m/z 466 [M + H] 12 173. ##STR00514##
Example 173 m/z 450 [M + H] 12 174. ##STR00515## Example 174 m/z
500 [M + H - 1], 502 [M + H + 1] 12 175. ##STR00516## Example 175
m/z 513 [ES+ - 1], 515 [ES+ + 1] 11 176. ##STR00517## Example 176
m/z 549 [ES+ - 1], 551 [ES+ + 1], 553 [ES+ + 3] 11 177.
##STR00518## Example 177 m/z 499 [ES+ - 1], 501 [ES+ + 1] 11 178.
##STR00519## Example 178 m/z 535 [ES+ - 1], 537 [ES+ + 1] 539 [ES+
+ 3] 11 179. ##STR00520## Example 179 m/z 480 [ES+] 11 180.
##STR00521## Example 180 m/z 466 [ES+] 11 181. ##STR00522## Example
181 m/z 487 [ES+] 13 182. ##STR00523## Example 182 m/z 520 [ES+ -
1], 522 [ES+ + 1] 13 183. ##STR00524## Example 183 m/z 528 [ES+] 13
184. ##STR00525## Example 184 m/z 564 [ES+] 13 185. ##STR00526##
Example 185 m/z 581 [ES+] 13 186. ##STR00527## Example 186 m/z 501
[ES+] 13 187. ##STR00528## Example 187 m/z 536 [ES+ - 1], 538 [ES+
+ 1] 13 188. ##STR00529## Example 188 m/z 552 [ES+] 13 189.
##STR00530## Example 189 m/z 534 [ES+ - 1], 536 [ES+ + 1] 13 190.
##STR00531## Example 190 m/z 570 [ES+ - 1], 572 [ES+ + 1] 574 [ES+
+ 3] 13 191. ##STR00532## Example 191 m/z 586 [ES+ - 1], 588 [ES+ +
1] 13 192. ##STR00533## Example 192 m/z 542 [ES+] 13 193.
##STR00534## Example 193 m/z 578 [ES+ - 1], 580 [ES+ + 1] 13 194.
##STR00535## Example 194 m/z 594 [ES+] 13 195. ##STR00536## Example
195 m/z 466 [M + H] 12a 196. ##STR00537## Example 196 m/z 484 [M +
H - 1], 486 [M + H + 1] 12 197. ##STR00538## Example 197 m/z 500 [M
+ H - 1], 502 [M + H + 1] 12 198. ##STR00539## Example 198 m/z 520
[M + H - 1], 522 [M + H + 1], 524 [M + H + 3] 12 199. ##STR00540##
Example 199 m/z 485 [M + H - 1], 487 [M + H + 1] 12 200.
##STR00541## Example 200 m/z 518 [M + H - 1], 520 [M + H + 1] 12
201. ##STR00542## Example 201 m/z 498 [M + H - 1], 500 [M + H + 1]
12 202. ##STR00543## Example 202 m/z 514 [M + H - 1], 516 [M + H +
1] 12 203. ##STR00544## Example 203 m/z 504 [M + H - 1], 506 [M + H
+ 1] 12 204. ##STR00545## Example 204 m/z 502 [M + H] 12 205.
##STR00546## Example 205 m/z 516 [M + H] 12 206. ##STR00547##
Example 206 m/z 534 [M + H - 1], 536 [M + H + 1], 538 [M + H + 3]
12 207. ##STR00548## Example 207 m/z 513 [M + H - 1], 515 [M + H +
1] 12 208. ##STR00549## Example 208 m/z 511 [M + H - 1], 513 [M + H
+ 1] 12 209. ##STR00550## Example 209 m/z 563 [M + H - 1], 565 [M +
H + 1] 12 210. ##STR00551## Example 210 m/z 483 [M + H - 1], 485 [M
+ H + 1] 12 211. ##STR00552## Example 211 m/z 529 [M + H - 1], 531
[M + H + 1] 12a 212. ##STR00553## Example 212 m/z 579 [M + H - 1],
581 [M + H + 1] 12a 213. ##STR00554## Example 213 m/z 499 [M + H -
1], 501 [M + H + 1] 12a 214. ##STR00555## Example 214 m/z 561 [M +
H - 1], 563 [M + H + 1], 565 [M + H + 3] 12 215. ##STR00556##
Example 215 m/z 501 [M + H - 1], 503 [M + H + 1] 12 216.
##STR00557## Example 216 m/z 609 [M + H - 1], 611 [M + H + 1] 12
217. ##STR00558## Example 217 m/z 517 [M + H - 1], 519 [M + H + 1],
521 [M + H + 3] 12 218. ##STR00559## Example 218 m/z 550 [M + H -
1], 552 [M + H + 1] 13 219. ##STR00560## Example 219 m/z 602 [M + H
- 1], 604 [M + H + 1] 13 220. ##STR00561## Example 220 m/z 561 [M +
H - 1], 563 [M + H + 1] 13 221. ##STR00562## Example 221 m/z 534 [M
+ H - 1], 536 [M + H + 1] 13 222. ##STR00563## Example 222 m/z 550
[M + H - 1], 552 [M + H + 1] 13 223. ##STR00564## Example 223 m/z
561 [M + H - 1], 563 [M + H + 1] 13 224. ##STR00565## Example 224
m/z 520 [M + H - 1], 522 [M + H + 1] 13 225. ##STR00566## Example
225 m/z 500 [M + H] 13 226. ##STR00567## Example 226 m/z 500 [M +
H] 13 227. ##STR00568## Example 227 m/z 534 [M + H - 1], 536 [M + H
+ 1] 13 228. ##STR00569## Example 228 m/z 577 [M + H - 1], 579 [M +
H + 1] 13 229. ##STR00570## Example 229 m/z 500 [M + H] 13 230.
##STR00571## Example 230 m/z 554 [M + H - 1], 556 [M + H + 1], 558
[M + H + 3] 13 231. ##STR00572## Example 231 m/z 526 [M + H - 1],
528 [M + H + 1] 13 232. ##STR00573## Example 232 m/z 554 [M + H -
1], 556 [M + H + 1], 558 [M + H + 3] 13 233. ##STR00574## Example
233 m/z 554 [M + H - 1], 556 [M + H + 1], 558 [M + H + 3] 13 234.
##STR00575## Example 234 m/z 520 [M + H - 1], 522 [M + H + 1] 13
235. ##STR00576## Example 235 m/z 520 [M + H - 1], 522 [M + H + 1]
13 236. ##STR00577## Example 236 m/z 549 [M + H - 1], 551 [M + H +
1] 13
237. ##STR00578## Example 237 m/z 533 [M + H - 1], 535 [M + H + 1]
13 238. ##STR00579## Example 238 m/z 533 [M + H - 1], 535 [M + H +
1] 13 239. ##STR00580## Example 239 m/z 549 [M + H - 1], 551 [M + H
+ 1] 13 240. ##STR00581## Example 240 m/z 534 [M + H - 1], 536 [M +
H + 1] 13 241. ##STR00582## Example 241 m/z 537 [M + H - 1], 539 [M
+ H + 1] 13 242. ##STR00583## Example 242 m/z 521 [M + H - 1], 523
[M + H + 1] 13 243. ##STR00584## Example 243 m/z 588 [M + H - 1],
590 [M + H + 1] 13 244. ##STR00585## Example 244 m/z 550 [M + H -
1], 552 [M + H + 1] 13 245. ##STR00586## Example 245 m/z 551 [M + H
- 1], 553 [M + H + 1] 13 246. ##STR00587## Example 246 m/z 549 [M +
H - 1], 551 [M + H + 1] 13 247. ##STR00588## Example 247 m/z 550 [M
+ H - 1], 552 [M + H + 1] 13 248. ##STR00589## Example 248 m/z 521
[M + H - 1], 523 [M + H + 1] 13 249. ##STR00590## Example 249 m/z
521 [M + H - 1], 523 [M + H + 1] 13
Assays for Detecting and Measuring the Effect of Compounds on
F508del CFTR Channels
CFTR-YFP Assay-CFTR Corrector Protocol:
[0203] This protocol is designed to selectively screen small
molecule compounds for F508del CFTR corrector activities in the YFP
(yellow fluorescent protein) flux assay. In this protocol, the
cells are incubated with testing compounds for 24 hours, washed
with PBS, stimulated with forskolin and a standard potentiator, and
fluorescence in each plate well is measured kinetically read on a
384-well plate reader, such as the Hamamatsu FDSS-6000.
[0204] YFP fluorescence intensity values are acquired at high speed
before and after iodide buffer is injected to the assay cells.
Iodide enters the cells via active CFTR channels in the plasma
membrane, and quenches the YFP fluorescence. The rate of
fluorescence quenching is proportionate to the total CFTR activity
in the cell membrane. F508del CFTR correctors increase the number
of CFTR molecules in the testing cell plasma membrane, and thereby
accelerate YFP quenching.
[0205] This method was initially developed for bench top plate
readers (Galietta, J, Jayaraman, S and Verkman, A S. Cell-based
assay for high-throughput quantitative screening of CFTR chloride
transport agonists. Am. J. Physiol Cell Physiol (2001), 281:
C1734), and was adapted to the HTS format (Sui J, Cotard S,
Andersen J, Zhu P, Staunton J, Lee M, Lin S. Optimization of a
Yellow fluorescent protein-based iodide influx high-throughput
screening assay for cystic fibrosis transmembrane conductance
regulator (CFTR) modulators. Assay Drug Dev Technol. (2010), 8:
656-668).
[0206] Fisher Rat Thyroid (FRT) cells stably expressing both human
F508del CFTR and a halide-sensitive yellow fluorescent protein
(YFP-H148Q/1152L 25,22) (Galietta et al. Am. J. Physiol Cell
Physiol 281(5), C1734, 2001) were cultured on plastic surface in
Coon's modified Ham's F12 medium supplemented with FBS 10%,
L-glutamine 2 mM, penicillin 100 U/ml, and streptomycin 100
.mu.g/ml. G418 (0.75-1.0 mg/ml) and zeocin (3.2 ug/ml) were used
for selection of FRT cells expressing F508del CFTR and YFP. For
primary screening, FRT cells were plated into 384-well black wall,
transparent bottom microtiter plates (Costar; Corning Inc.) at a
cell density of 20,000-40,000 per well. Test compound was applied
to the cells at varying concentrations ranging from 2 nM-40 .mu.M
in either a 2-fold or 3-fold dilution series. Cells were incubated
in a cell culture incubator at 37.degree. C. with 5% CO.sub.2 for
24-26 h. Assay plates were washed with DPBS media (Thermo, cat#
SH30028.02) to remove unbound cells and compound. Stimulation media
(25 .mu.L) containing 20 .mu.M Forskolin & 30 .mu.M P3
[6-(Ethyl-phenyl-sulfonyl)-4-oxo-1,4-dihydro-quinoline-3-carboxylic
acid 2-methoxy-benzylamide] in Hams F-12 coon's modified media was
added to the plate wells and incubated at room temperature for
60-120 min. 25 .mu.L of HEPES-PBS-I buffer (10 mM HEPES, 1 mM
MgCl.sub.2, 3 mM KCl, 1 mM CaCl.sub.2, 150 mM NaI) was then added
and fluorescence quench curves (Excitation 500 nm/Emission 540 nm;
exposure 136 ms) were immediately recorded on an FDSS-6000 plate
reader (Hamamatsu). Quench rates were derived from least squares
fitting of the data as described by Sui et al (2010).
CFTR-YFP Assay-CFTR Potentiator Protocol:
[0207] This protocol is designed to selectively screen small
molecule compounds for F508del CFTR potentiator activities in the
YFP (yellow fluorescent protein) flux assay. Such compounds act
acutely to stimulate CFTR already expressed on the membrane
surface. In this protocol, the cells are incubated at 27.degree. C.
for 24 hours to homogeneously boost F508del CFTR expression in the
cell membrane (low temperature correction), washed with PBS,
treated with test compound, and CFTR activity is stimulated with
forskolin for 1-2 hr. Measurement of ion flux is initiated by
addition of iodide-containing buffer, and YFP quenching is
kinetically recorded using a 384-well plate reader, such as the
Hamamatsu FDSS-6000.
[0208] YFP fluorescence intensity values are acquired at high speed
over a 1 min time course before and after iodide buffer is injected
to the assay cells. Iodide enters the cells via active CFTR
channels in the plasma membrane, and quenches the YFP fluorescence.
The rate of fluorescence quenching is proportionate to total CFTR
activity in the cell membrane. F508del-CFTR potentiators increase
CFTR open probability or CFTR-mediated ion conductivity, and this
enhanced CFTR mediated iodide flux in the test cell plasma membrane
accelerates YFP quenching.
[0209] This method was initially developed for bench top plate
readers (Galietta, J, Jayaraman, S and Verkman, A S. Cell-based
assay for high-throughput quantitative screening of CFTR chloride
transport agonists. Am. J. Physiol Cell Physiol (2001), 281:
C1734), and was adapted to the HTS format (Sui J, Cotard S,
Andersen J, Zhu P, Staunton J, Lee M, Lin S. Optimization of a
Yellow fluorescent protein-based iodide influx high-throughput
screening assay for cystic fibrosis transmembrane conductance
regulator (CFTR) modulators. Assay Drug Dev Technol. (2010), 8:
656-668).
[0210] Fisher Rat Thyroid (FRT) cells stably expressing both human
F508del CFTR and a halide-sensitive yellow fluorescent protein
(YFP-H148Q/1152L 25,22) (Galietta et al., Am. J. Physiol Cell
Physiol 281(5), C1734, 2001) were cultured on plastic surface in
Coon's modified Ham's F12 medium supplemented with FBS 10%,
L-glutamine 2 mM, penicillin 100 U/ml, and streptomycin 100
.mu.g/ml. G418 (0.75-1.0 mg/ml) and zeocin (3.2 ug/ml) were used
for selection of FRT cells expressing F508del CFTR and YFP. For
primary screening, FRT cells were plated into 384-well black wall,
transparent bottom microtiter plates (Costar; Corning Inc.) at a
cell density of 20,000-40,000 per well. Cells were incubated in a
cell culture incubator at 37.degree. C. with 5% CO.sub.2 for 24-26
h. Assay plates were washed with DPBS media (Thermo, cat#
SH30028.02) to remove unbound cells. Test compound was applied to
the cells at varying concentrations ranging from 2 nM-40 .mu.M in
either a 2-fold or 3-fold dilution series in DPBS and stimulated
with 20 .mu.M Forskolin (final concentration) in Hams F-12 coon's
modified media. Plates were incubated at room temperature for
60-120 min. 25 .mu.L of HEPES-PBS-I buffer (10 mM HEPES, 1 mM
MgCl.sub.2, 3 mM KCl, 1 mM CaCl.sub.2, 150 mM NaI) was then added
and fluorescence quench curves (Excitation 500 nm/Emission 540 nm;
exposure 136 ms) were immediately recorded on an FDSS-6000 plate
reader (Hamamatsu). Quench rates were derived from least squares
fitting of the data as described by Sui et al (2010).
Cell Culture:
[0211] Primary CF airway epithelial cells were obtained from the
UNC Cystic Fibrosis Tissue Procurement and Cell Culture Core. The
cells are grown at 37.degree. C. in a Heracell 150i incubator using
growth media (BEGM, Fischer). Cells were then transferred to
differentiation media (ALI, UNC) for a minimum of 4 weeks on coated
Costar snapwells. Two days before the Ussing assay the mucus on the
apical surface of the cells was aspirated after incubating with 200
.mu.L of differentiation Media for at least thirty (30) minutes.
One day before the Ussing assay, test compounds were applied to the
basolateral surface of the cells at various test concentrations
(n=3 or n=4 replicates per test condition).
Ussing Assay
[0212] Ussing chambers and the associated voltage clamp were
obtained from Physiologic Instruments, (San Diego, Calif.). Ussing
assays were performed at the 37.degree. C. HEPES buffered
physiological saline (HB-PS) was used in apical and basolateral
chambers with glucose added to the basolateral solutions. Epithelia
were equilibrated for 15 minutes in the chambers while the bath
temperature and transepithelial voltage were stabilized and
adjusted before application of voltage clamp.
[0213] Compounds were added in the following order.
TABLE-US-00003 Step Chamber 3.0 uM Benzamil for 20 minutes apical
addition only 10 uM Forskolin for 20 minutes apical + basolateral
addition 10 uM Genestein for 20 minutes apical + basolateral
addition 10 uM CFTR-172 for 20 minutes apical + basolateral
addition 20 uM Bumetanide for 30 minutes basolateral addition
only
[0214] The short circuit current and transepithelial resistances
(typically >300 .OMEGA.-cm2) from each chamber was recorded
every 10 seconds on stored on a PC using Acquire and Analyze
(Physiologic Instruments).
Analysis
[0215] Efficacy of test compounds was compared using the average of
the forskolin response and the CFTR-172 inhibited current response
of the test compound divided by the average of the forskolin
response and the CFTR-172 inhibited current elicited by the
positive control. Normalized scores were tabulated for all
compounds and concentrations.
Table 3: CFTR-YFP Corrector Protocol:
[0216] EC.sub.50: "III" refers to an EC.sub.50<10 .mu.M, "II"
refers to EC.sub.50 range of 10-20 .mu.M, "I" refers to
EC.sub.50>20 .mu.M % Efficacy is reported as the E.sub.MAX
normalized to the positive control. "III" refers to
E.sub.MAX>80%, "II" refers to a range of 80%-30%, "I" refers to
a range of 30%-10%.
TABLE-US-00004 Example EC.sub.50 E.sub.MAX Example 1 III II Example
2 III II Example 3 III II Example 4 I II Example 5 III II Example 6
III II Example 7 III II Example 8 III II Example 9 III II Example
10 III II Example 11 III II Example 12 III I Example 13 III II
Example 14 I I Example 15 III II Example 16 II III Example 17 III
II Example 18 III II Example 19 III II Example 20 III II Example 21
I I Example 22 III II Example 23 III III Example 24 III II Example
25 III II Example 26 III II Example 27 III II Example 28 III II
Example 29 III I Example 30 III II Example 31 III II Example 32 I
II Example 33 II II Example 34 III II Example 35 III II Example 36
III I Example 37 III II Example 38 III III Example 39 III II
Example 40 III II Example 41 III II Example 42 III II Example 43
III II Example 44 III II Example 45 III II Example 46 III II
Example 47 III II Example 48 III II Example 49 III II Example 50
III II Example 51 III II Example 52 III II Example 53 III II
Example 54 III II Example 55 III II Example 56 III II Example 57
III II Example 58 III I Example 59 III II Example 60 III II Example
61 III II Example 62 III II Example 63 III II Example 64 III II
Example 65 III II Example 66 III I Example 67 I I Example 68 III I
Example 69 III I Example 70 III I Example 71 III I Example 72 III I
Example 73 III II Example 74 III II Example 75 II II Example 76 III
II Example 77 III II Example 78 III I Example 79 III II Example 80
III II Example 81 III II Example 82 III II Example 83 III II
Example 84 III II Example 85 I I Example 86 III II Example 87 I I
Example 88 I II Example 89 II III Example 90 II II Example 91 III
II Example 92 III II Example 93 III II Example 94 III I Example 95
II I Example 96 III II Example 97 III II Example 98 III I Example
99 III II Example 100 III I Example 101 III I Example 102 III II
Example 103 III I Example 104 III II Example 105 III II Example 106
III I Example 107 III II Example 108 III II Example 109 III II
Example 110 III II Example 111 III II Example 112 III III Example
113 III II Example 114 III II Example 115 III II Example 116 III
III Example 117 III II Example 118 III II Example 119 III III
Example 120 III III Example 121 III II Example 122 III III Example
123 III I Example 124 III II Example 125 III II Example 126 III II
Example 127 III II Example 128 III I Example 129 III I Example 130
III II Example 131 III I Example 132 III II Example 133 III III
Example 134 III II Example 135 II I Example 136 III I Example 137
II I Example 138 I II Example 139 I I Example 140 I I Example 141
III I Example 142 III I Example 143 III I Example 144 III I Example
145 III I Example 146 III I Example 147 III I Example 148 III I
Example 149 III I Example 150 II II Example 151 III II Example 152
II I Example 153 III II Example 154 III II Example 155 III II
Example 156 III II Example 157 III I Example 158 II I Example 159
III I Example 160 III II Example 161 II I Example 162 III I Example
163 III III Example 164 III III Example 165 III II Example 166 III
II Example 167 I I Example 168 III II Example 169 III II Example
170 I I Example 171 III I Example 172 III I Example 173 III II
Example 174 I I Example 175 III I Example 176 III I Example 177 III
I Example 178 III I Example 179 III I Example 180 II I Example 181
III II Example 182 III I Example 183 III II Example 184 III I
Example 185 III II Example 186 III I Example 187 III I Example 188
III I Example 189 III II Example 190 III I Example 191 II I Example
192 III II Example 193 III II Example 194 III II Example 195 III II
Example 196 II II Example 197 III I Example 198 III I Example 199
III I Example 200 III I Example 201 III II Example 202 III I
Example 203 III 1 Example 204 III I Example 205 III I Example 206
II I Example 207 II II Example 208 II II Example 209 III II Example
210 II II Example 211 II II Example 212 II II Example 213 II I
Example 214 III I Example 215 II I Example 216 III I Example 217
III I Example 218 III I Example 219 III I Example 220 III II
Example 221 III II Example 222 III I Example 223 II I Example 224
III I Example 225 III I Example 226 III I Example 227 III I Example
228 II I Example 229 III I Example 230 III II Example 231 III II
Example 232 III I Example 233 III II Example 234 III II Example 235
III II Example 236 III I Example 237 III I Example 238 III II
Example 239 III I Example 240 III I Example 241 III I Example 242
III I Example 243 II I Example 244 II II Example 245 III II Example
246 II II Example 247 III II
Example 248 III II Example 249 III II
[0217] The compounds and processes of the present invention will be
better understood in connection with the following examples, which
are intended as an illustration only and not limiting of the scope
of the invention. Various changes and modifications to the
disclosed embodiments will be apparent to those skilled in the art
and such changes and modifications including, without limitation,
those relating to the chemical structures, substituents,
derivatives, formulations and/or methods of the invention may be
made without departing from the spirit of the invention and the
scope of the appended claims.
[0218] The patent and scientific literature referred to herein
establishes the knowledge that is available to those with skill in
the art. All United States patents and published or unpublished
United States patent applications cited herein are incorporated by
reference. All published foreign patents and patent applications
cited herein are hereby incorporated by reference. All other
published references, documents, manuscripts and scientific
literature cited herein are hereby incorporated by reference.
[0219] While this invention has been particularly shown and
described with references to preferred embodiments thereof, it will
be understood by those skilled in the art that various changes in
form and details may be made therein without departing from the
scope of the invention encompassed by the appended claims.
* * * * *