U.S. patent application number 13/982360 was filed with the patent office on 2013-12-19 for coagulation factor-targeting to tlt-1 on activated platelets.
This patent application is currently assigned to Novo Nordisk A/S. The applicant listed for this patent is Jens Breinholt, Ida Hilden, Mikael Kofod-Hansen, Bernd Peschke. Invention is credited to Jens Breinholt, Ida Hilden, Mikael Kofod-Hansen, Bernd Peschke.
Application Number | 20130337537 13/982360 |
Document ID | / |
Family ID | 44558650 |
Filed Date | 2013-12-19 |
United States Patent
Application |
20130337537 |
Kind Code |
A1 |
Hilden; Ida ; et
al. |
December 19, 2013 |
COAGULATION FACTOR-TARGETING TO TLT-1 ON ACTIVATED PLATELETS
Abstract
The current invention relates to: procoagulant proteins which
may, for example, be fusion proteins or chemical conjugates;
methods of producing said procoagulant proteins; polynucleotides
that encode said fusion proteins and cells that expresses them.
Furthermore, the current invention relates to procoagulant proteins
for use as a medicament. Individuals that have a coagulopathy, such
as haemophilia A and B with or without inhibitors, may be treated
with the procoagulant proteins of the current invention.
Inventors: |
Hilden; Ida; (Vanloese,
DK) ; Peschke; Bernd; (Maelov, DK) ;
Breinholt; Jens; (Dyssegaerd, DK) ; Kofod-Hansen;
Mikael; (Koebenhavn N, DK) |
|
Applicant: |
Name |
City |
State |
Country |
Type |
Hilden; Ida
Peschke; Bernd
Breinholt; Jens
Kofod-Hansen; Mikael |
Vanloese
Maelov
Dyssegaerd
Koebenhavn N |
|
DK
DK
DK
DK |
|
|
Assignee: |
Novo Nordisk A/S
Bagsvaerd
DK
|
Family ID: |
44558650 |
Appl. No.: |
13/982360 |
Filed: |
March 2, 2012 |
PCT Filed: |
March 2, 2012 |
PCT NO: |
PCT/EP2012/053619 |
371 Date: |
August 15, 2013 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
|
|
61449254 |
Mar 4, 2011 |
|
|
|
Current U.S.
Class: |
435/188 |
Current CPC
Class: |
C12N 9/96 20130101; A61K
47/6849 20170801; C07K 2317/34 20130101; C07K 2317/55 20130101;
C12N 9/6437 20130101; C07K 2317/51 20130101; C12Y 304/21021
20130101; C07K 2319/00 20130101; A61K 38/00 20130101; A61P 7/04
20180101; C07K 2299/00 20130101; C07K 2317/21 20130101; C07K
2319/21 20130101; C12N 9/644 20130101; C12Y 304/21022 20130101;
C07K 2317/41 20130101; C07K 2317/24 20130101; C07K 2317/92
20130101; C07K 2317/515 20130101; A61K 47/6815 20170801; C07K
16/2803 20130101; C07K 14/745 20130101; C07K 14/4703 20130101; A61K
38/4846 20130101; C07K 2317/56 20130101 |
Class at
Publication: |
435/188 |
International
Class: |
C12N 9/96 20060101
C12N009/96 |
Foreign Application Data
Date |
Code |
Application Number |
Mar 2, 2011 |
EP |
11156682.4 |
Claims
1-17. (canceled)
18. A procoagulant protein comprising a coagulation factor
covalently attached to a monoclonal antibody or a fragment thereof,
the monoclonal antibody or fragment thereof capable of specifically
binding TLT-1 or a fragment or a variant thereof.
19. The procoagulant protein according to claim 18, wherein the
coagulation factor is a serine protease or a derivative
thereof.
20. The procoagulant protein according to claim 19, wherein the
serine protease is a FVII polypeptide.
21. The procoagulant protein according to claim 19, wherein the
serine protease is a FIX polypeptide.
22. The procoagulant protein according to claim 18, wherein the
monoclonal antibody or fragment thereof is a Fab fragment.
23. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of V17, Q18, C19, H20, Y21, R22, L23, Q24, D25, V26, K27, A28, L63,
G64, G65, G66, L67, L68, G89, A90, R91, G92, P93, Q94, I95, and L96
of SEQ ID NO: 5.
24. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of L36, P37, E38, G39, C40, Q41, P42, L43, V44, S45, S46, A47, V73,
T74, L75, Q76, E77, E78, D79, A80, G81, E82, Y83, G84, C85, M86,
R91, G92, P93, Q94, I95, L96, H97, R98, V99, S100, and L101 of SEQ
ID NO: 5.
25. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of V17, Q18, C19, H20, Y21, R22, L23, Q24, D25, V26, K27, A28, R91,
G92, P93, Q94, I95, L96, H97, R98, V99, S100, and L101 of SEQ ID
NO: 5.
26. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of K118, 1119, G120, S121, L122, A123, E124, N125, A126, and F127
of SEQ ID NO: 6.
27. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of E5, T6, H7, K8, I9, G10, S11, L12, A13, E14, N15, A16, F17, S18,
D19, and P20 of SEQ ID NO: 7.
28. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises one or more residues selected from the group consisting
of K133, I134, G135, S136, L137, A138, N140, A141, F142, S143,
D144, P145, and A146 of SEQ ID NO: 2.
29. The procoagulant protein according to claim 18, the monoclonal
antibody or fragment thereof having an epitope, wherein the epitope
comprises K133, I134, G135, S136, L137, A138, N140, A141, F142,
S143, D144, P145 and A146 of SEQ ID NO: 2.
30. The procoagulant protein according to claim 28, wherein the
heavy chain of the monoclonal antibody or fragment thereof
comprises a CDR3 sequence of amino acids 117 to 121 (GVFTS) of SEQ
ID NO: 40.
31. The procoagulant protein according to claim 28, wherein the
heavy chain of the monoclonal antibody or fragment thereof
comprises: a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ
ID NO: 40, wherein one of these amino acids may be substituted by a
different amino acid; and a CDR2 sequence of amino acids 68 to 84
(EINPDSSTINYNPSLKD) of SEQ ID NO: 40, wherein one, two, three or
four of these amino acids may be substituted by a different amino
acid; and/or a CDR3 sequence of amino acids 117 to 121 (GVFTS) of
SEQ ID NO: 40, wherein one, two or three of these amino acids may
be substituted by a different amino acid; and wherein the light
chain of the monoclonal antibody or a fragment thereof comprises: a
CDR1 sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFH) of SEQ ID
NO: 41, wherein one, two, three or four of these amino acids may be
substituted with a different amino acid; and/or a CDR2 sequence of
amino acids 74 to 80 (KVSNRFS) of SEQ ID NO: 41, wherein one or two
of these amino acids may be substituted with a different amino
acid; and/or a CDR3 sequence of amino acids 113 to 121 (SQSTHVPYT)
of SEQ ID NO: 41, wherein one or two of these amino acids may be
substituted with a different amino acid.
32. The procoagulant protein according to claim 18, which is a
conjugate of the coagulation factor and the monoclonal antibody or
a fragment thereof.
33. A process for preparing the conjugate of claim 32, comprising:
chemically conjugating the TLT-1 monoclonal antibody or fragment
thereof, with one reactive group (RS1) of a linker and reacting the
coagulation factor with another reactive group (RS2) of said
linker.
34. The process of claim 33, wherein said linker is a polymer.
Description
FIELD OF THE INVENTION
[0001] The current invention relates to procoagulant proteins,
polynucleotides that encode procoagulant fusion proteins, cells
that express procoagulant fusion proteins, a process for preparing
procoagulant proteins and uses of said procoagulant proteins.
BACKGROUND OF THE INVENTION
[0002] Normal resting platelets freely flow throughout the blood
circulation when the endothelium is intact. When the single-layered
endothelial barrier is damaged, resting platelets adhere to
subendothelial structures by means of glycoprotein (GP) receptors.
For example, GPIaIIa and GPVI bind collagen; GPIcIIa binds
fibronectin; GPIcIIa binds laminin and GPIb-V-IX binds von
Willebrand Factor (vWF) polymers. Adhesion to the extravascular
tissue components exposed following a vessel injury in conjunction
with the influence of factors produced locally at the site of
injury, e.g. the serine protease thrombin, lead to activation of
the platelets. In the complex process of activation, platelets
change shape and expose certain phospholipids on their surface.
Also, receptors already present on the platelet surface in the
resting state become activated upon platelet activation.
Additionally, platelet activation leads to the release and surface
exposure of molecules which in the resting state are stored
intracellularly in alpha and dense granules and thus not present on
the surface of platelets in the resting state. GPIIbIIIa is an
example of a platelet receptor present on the surface of both
resting and activated platelets. GPIIbIIIa exists on resting
platelets in a closed and inactive conformation and during platelet
activation assumes an open and active conformation capable of
binding its ligands, including fibrinogen and fibrin. An example of
a receptor stored intracellularly in alpha granules in resting
platelets, but released and exposed on the surface of the activated
platelet is TREM-like transcript 1 (TLT-1) (Washington et al.,
Blood, 104, 1042-1047 (2004), Gattis et al., Journal of Biological
Chemistry, 281, 13396-13403 (2006)) to which the present
application relates.
[0003] The blood coagulation cascade is initiated when tissue
factor (TF) bearing cells in the subendothelium are exposed to
components circulating in the blood. Exposure of TF to circulating
coagulation factor VIIa (FVIIa) triggers the formation of small
amounts of thrombin, which serves as a procoagulant signal leading
to further recruitment and activation of platelets adhered to the
site of injury. The coagulation is further propagated and amplified
on the surface of the activated platelets, eventually leading to a
burst of thrombin generation, which in turn lead to activation and
polymerization of fibrinogen to fibrin fibers, cross-linking and
stabilizing the haemostatic clot. A feature attributed to several
of the components of the coagulation cascade is their ability to
specifically associate with the phospholipid membrane of activated
platelets. To this end, FVIIa as well as e.g. coagulation factors
IX and X (FIX and FX, respectively) and their corresponding
activated forms (FVIIa, FIXa and FXa, respectively), possess a
.gamma.-carboxyglutamic acid rich region (Gla domain) which enables
them to be directed and bind to the surface of activated platelets.
Coagulation factor VIII (FVIII) is associated with activated
platelets by binding via its light chain. The mechanism of
coagulation factor XI (FXI) binding to platelets is more
controversial but growing evidence suggests that platelets affect
FXI and FXIa and that binding of FXI to platelets requires residues
in the FXI A3 domain (Emsley et al., 2010, Blood, Vol. 115, p.
2569).
[0004] Membrane binding strongly enhances the activity of
coagulation factors such as FVIIa. However, their interactions with
platelet membranes are of varying affinity. For example, the
binding constant (K.sub.D) for FVIIa to the platelet surface is in
the low micromolar range. Improved platelet binding and
localisation of the coagulation factors to the activated platelet
surface may enhance their activity. A means of doing so is thus
desirable.
[0005] In subjects with a coagulopathy, such as human beings with
haemophilia A, B or C, various steps of the coagulation cascade are
rendered dysfunctional due to, for example, the absence or
insufficient presence of a functional coagulation factor. Such
dysfunction of one part of coagulation results in insufficient
blood coagulation leading to spontaneous bleeds e.g. in joints and
potentially life-threatening bleeding.
[0006] An object of the current invention is to provide a compound
that is suitable for use as a procoagulant drug in such subjects. A
second object of the current invention is to provide procoagulant
molecules that have increased activity, compared to the coagulation
factors from which they derive. A third object of the current
invention is to provide molecules that up-regulate blood
coagulation in a physiologically suitable microenvironment. A
fourth object of the current invention is to provide procoagulant
molecules that have longer half lives than the coagulation factor
from which they derive. A fifth object of the current invention is
to provide procoagulant molecules that do not give rise to a drop
in platelet count. A further object of the current invention is to
direct a coagulation factor to the surface of activated platelets.
One particular object of the invention is to enhance the generation
of FIXa and/or FXa on the surface of the activated platelet. Thus,
the object is to enable the initiation of blood coagulation on the
surface of activated platelets that are located intravascularly or
extravascularly. WO06/096828 discloses chimeric proteins that
comprise soluble tissue factor (sTF) and a phosphatidyl serine (PS)
binding domain, such as Annexin V. PS is exposed on the surface of
activated cells, such as monocytes, endothelial cells and cells
undergoing apoptosis, as well as on activated and resting
platelets. The chimeric proteins are both pro-coagulant and
anti-coagulant; the latter due to the fact that, in higher doses,
constructs compete with coagulation factors in binding to PS on
activated platelets. Thus, the chimeric proteins of WO06/096828
have a different set of properties than the procoagulant proteins
described herein.
SUMMARY OF THE INVENTION
[0007] The procoagulant proteins of the present invention are
specifically targeted to activated platelets, present at sites of
injury. Proteins of the present invention are based upon the
identification of particular receptors and component epitopes that
appear on platelet membranes when platelets are no longer resting
but are activated or in the process of being activated. Thus, the
invention relates to a method of enhancing coagulation on the
surface of activated platelets.
[0008] Procoagulant proteins of the invention comprise (i) at least
one coagulation factor, covalently attached to (ii) an antibody or
a fragment thereof that is capable of binding (iii) a receptor,
and/or a fragment or variant thereof, which is exposed on the
surface of activated platelets and is exposed to a lesser degree
(and in some assays not detectably exposed) on the surface of
resting platelets. TLT-1 is an example of such a receptor and
procoagulant proteins may, for example, bind, to TLT-1 (16-162),
TLT-1 (20-125) or TLT-1 (126-162). The coagulation factor may be a
serine protease in the zymogen form, e.g., FVII, FIX or FX or the
corresponding activated form FVIIa, FIXa, and FXa, or a derivative
of a serine protease; FV or a derivative thereof, FVIII or a
derivative thereof or FXI or a derivative thereof. Coagulation
factor and antibody or antibody fragment are optionally joined by
means of a linker. Procoagulant proteins of the invention may be
fusion proteins or chemical conjugates. Hence, the invention also
relates to their manufacture. One process for preparing a
composition that comprises at least a procoagulant protein of the
invention involves chemically conjugating (i), a TLT-1 antibody or
fragment thereof, with one reactive group (RS1) of a linker and
reacting (ii), the coagulation factor, with another reactive group
(RS2) of said linker.
[0009] In this case, said linker may be a polymer, such as
polyethylene glycol (PEG).
[0010] The current invention also provides the following: an
isolated nucleotide sequence that encodes any one of the
procoagulant proteins according to the current invention; a vector
that comprises an isolated nucleotide sequence that, in turn,
encodes any one of the procoagulant proteins according to the
current invention; an isolated cell that comprises a nucleotide
sequence that encodes any one of the procoagulant proteins of the
current invention. Said nucleotide sequence may, in turn, be
expressed by an intracellular vector. Said isolated cell may be a
eukaryotic cell, such as a mammalian cell, such as a BHK or a CHO
or a HEK cell.
[0011] Similarly, the invention relates to a procoagulant protein
for use as a medicament and for the treatment of a coagulopathy. In
one embodiment, a therapeutically effective amount of said protein
is parenterally administered, such as intravenously or
subcutaneously administered, to an individual in need thereof. Such
individual in need may have any congenital, acquired and/or
iatrogenic coagulopathy.
DESCRIPTION OF THE DRAWINGS
[0012] FIG. 1: Human TLT-1 nucleotide and amino acid sequences. In
FIG. 1, the nucleotide- and amino acid sequences representing
hTLT-1 are shown. Here, nucleotide sequence position 1-45 encode
the predicted signal peptide, the nucleotide sequence at position
46-486 encode the extracellular domain of hTLT-1, the nucleotide
sequence position 487-555 encode the transmembrane region and the
nucleotide sequence at position 556-933 encode the intracellular
domain of hTLT-1.
[0013] FIG. 2: Nucleotide and amino acid sequences representing the
extracellular domain of human TLT-1 containing a C-terminal His-6
tag. In FIG. 2, the nucleotide- and amino acid sequences
representing the extracellular domain of hTLT-1 with a C-terminal
His tag are shown. Here, the underlined sequence (7-15) indicates
the positions of a kozak sequence, the nucleotide sequence at
position 16-60 encodes the predicted signal peptide, the nucleotide
sequence at position 61-501 encode the extracellular domain of
hTLT-1 and the nucleotide sequence at position 502-519 encodes the
6.times.His tag (in bold). The restriction enzyme sites HindIII
(nucleotide sequence at position 1-6) and EcoRI (nucleotide
sequence at position 523-528) are also shown and the stop codon is
marked with an asterisk (520-522).
[0014] FIG. 3A-D: The variable domain of 0012LC and 0012HC
including Kabat numbering: 3A) The variable domain of 0012LC; 3B)
The variable domain of 0012LC Kabat numbering; 3C) The variable
domain of 0012HC; 3D) The variable domain of 0012HC--Kabat
numbering. In FIG. 3A, the nucleotide sequence at position 1-57
encodes the LC signal peptide sequence; the nucleotide sequences at
position 58-396 encodes the variable domain of 0012LC. In FIG. 3B,
the sequences in bold and grey represent positions of the 0012LC
CDRs according to Kabat numbering. In FIG. 3C, the nucleotide
sequence at position 1-54 encodes the 0012HC signal peptide, the
nucleotide sequence at position 55-396 encodes the variable domain
of 0012HC. In FIG. 3D, the sequences in bold and grey represent
positions of the 0012HC CDRs according to Kabat numbering.
[0015] FIG. 4: The variable domain of 0012LC together with constant
region of human LC,kappa and a HPC4 tag (encoded by
pTT-0012LC.HPC4). In FIG. 4, the nucleotide sequences at position
1-57 encodes the LC signal peptide, the nucleotide sequence 58-396
encodes the variable domain of 0012LC, the nucleotide sequence
397-714 encodes the constant region of human 0012LC, kappa and the
nucleotide sequence 715-750 encodes a HPC4 tag.
[0016] FIG. 5: The variable domain of 0012HC together with the
constant region of human IgG4 (pTT-0012HC). In FIG. 5, the
nucleotide sequence 1-54 encodes the HC signal peptide, the
nucleotide sequence 55-396 encodes the variable domain of 0012HC
and the nucleotide sequence 397-1377 encodes the constant region of
human IgG4 (in bold).
[0017] FIG. 6: Sequence coverage of HX analyzed peptides of TLT-1
in the presence and absence of mAb0023. The primary sequence of
hTLT-1 is displayed above the HX analyzed peptides (shown as
horizontal bars). Peptides showing similar exchange patterns both
in the presence and absence of 0023 are displayed in white whereas
peptides showing reduced deuterium incorporation upon 0023 binding
are coloured black.
[0018] FIG. 7: Sequence coverage of HX analyzed peptides of TLT-1
in the presence and absence of mAb0051. The primary sequence of
hTLT-1 is displayed above the HX analyzed peptides (shown as
horizontal bars). Peptides showing similar exchange patterns both
in the presence and absence of 0051 are displayed in white whereas
peptides showing reduced deuterium incorporation upon 0051 binding
are coloured black.
[0019] FIG. 8: Sequence coverage of HX analyzed peptides of TLT-1
in the presence and absence of mAb0062. The primary sequence of
hTLT-1 is displayed above the HX analyzed peptides (shown as
horizontal bars). Peptides showing similar exchange patterns both
in the presence and absence of 0062 are displayed in white whereas
peptides showing reduced deuterium incorporation upon 0062 binding
are coloured black.
[0020] FIG. 9: Sequence coverage of HX analyzed peptides of TLT-1
in the presence and absence of mAb0061 (mAb0012). The primary
sequence of hTLT-1 is displayed above the HX analyzed peptides
(shown as horizontal bars). Peptides showing similar exchange
patterns both in the presence and absence of 0061 are displayed in
white whereas peptides showing reduced deuterium incorporation upon
0061 binding are coloured black.
[0021] FIG. 10: Sequence coverage of HX analyzed peptides of TLT-1
region 126-162. The primary sequence of hTLT-1 is displayed above
the HX analyzed peptides (shown as horizontal bars). All peptides
showed reduced deuterium incorporation upon mAb0061 (mAb0012)
binding.
[0022] FIG. 11A: Effect of FVIIa-Fab1029 on TF-induced fibrin clot
formation in human whole blood (HWB) from a normal donor measured
by thromb-elastography (TEG). Clot formation in re-calcified HWB
(curve HWB) is induced by 0.03 pM TF (Innovin.RTM.). The curve
"Hemophilia" shows the delayed and inadequate clot formation when
HWB is supplemented with 10 .mu.g/ml anti-FVIII antibody. Other
curves show the curves obtained when the hemophilia-like condition
induced by the FVIII antibody is reverted by various concentrations
(0; 0.25; 0.5; 1.0 nM) of either FVIIa-Fab1029 or rFVIIa as
indicated. The FVIII bypassing activity of FVIIa-Fab1029 is shown
to be more potent than that of rFVIIa.
[0023] FIG. 11B: Effect of FVIIa-Fab1029 on TF-induced fibrin clot
formation in human whole blood (HWB) from a normal donor measured
by thromb-elastography (TEG). R-time determined from the TEG traces
of the experiment shown in FIG. 11A.
[0024] Citrated-stabilized human whole blood (HWB) is drawn from
normal donors. Hemophilia-like conditions are obtained by
incubation of HWB with 10 .mu.g/ml anti-FVIII antibody (Sheep
anti-Human Factor VIII; Hematologic Technologies Inc) for 30 min at
room temp. Clot formation is measured by thrombelastography (5000
series TEG analyzer, Haemoscope Corporation, Niles, Ill., USA).
Various concentrations (0; 0.25; 0.5; 1.0 nM) of FVIIa-Fab1029 or
rFVIIa are added to hemophilia-like citrated HWB. Clotting is
initiated when 340 .mu.l of normal or hemophilia-like HWB is
transferred to a thrombelastograph cup containing 20 .mu.l 0.2 M
CaCl.sub.2 with 0.03 pM lipidated TF (Innovin.RTM., Dade Behring
GmbH (Marburg, Germany). The TEG trace is followed continuously for
up to 120 min. The following TEG variables are recorded: R time
(clotting time i.e. the time from initiation of coagulation until
an amplitude of 2 mm was obtained), .alpha.-angle (clot development
measured as the angle between the R value and the inflection point
of the TEG trace), K (speed of clot kinetics to reach a certain
level of clot strength, amplitude=20 mm), and MA (maximal amplitude
of the TEG trace reflecting the maximal mechanical strength of the
clot).
[0025] FIG. 12: Effect of FIX-Fab0135 on TF-induced fibrin clot
formation in human whole blood (HWB) from a normal donor measured
by thromb-elastography (TEG). Clot formation in re-calcified HWB
(curve HWB) is induced by 0.03 pM TF (Innovin.RTM.). The curve
"Hemophilia" shows the delayed and inadequate clot formation when
HWB is supplemented with 10 .mu.g/ml anti-FVIII antibody. Other
curves show TEG traces obtained when the hemophilia A-like
condition induced by the FVIII antibody is reverted by various
concentrations (0.1; 0.2; 1.0; 5.0; 10 nM) of FIX-Fab0135. TEG
curves obtained when FIX fusion protein is replaced by 1 nM rFVIIa
or 10 nM rFIX are shown for comparison.
[0026] FIG. 13: FIX-Fab0135 targeted to TLT-1 enriched phospholipid
vesiches markedly promotes FX activation induced by FVIIa in
absence of FVIII. Various concentrations (0.05-100 nM) of rFVIIa
are incubated for 15 min in Hepes buffer (.smallcircle.) or in
Hepes buffer containing 10 nM FIX (.quadrature.); 10 nM FIXa
(.box-solid.) or 10 nM FIX-Fab0135 (.tangle-solidup.). This is then
mixed and incubated for 3 min with 100 nM FX and TLT-1 enriched
phospholipid vesicles at 1:4,000 dilution in absence or presence of
5 nM FVIII as indicated. The reaction is stopped with EDTA, and FXa
generation is measured in a chromogenic assay.
[0027] FIG. 14: TLT-1 expression on human platelets. The figure
shows the TLT-1 number on platelets in whole blood gated on forward
and side scatter in flow cytometry analysis. The mean fluorescence
within the platelet gate was used to calculate the TLT-1 number
using a standard curve obtained from beads with a definite number
of binding sites for the detecting antibody. The platelets were
activated with protease activated receptor-1 activating peptide
SFLLRN (0.3-30 .mu.M). To ensure maximum TLT-1 expression a
combination of SFLLRN (30 .mu.M) and Convulxin (Cvlxn) (100 ng/ml)
was used as control. TLT-1 expression was measured by two different
anti-TLT-1 antibodies mAb0136; left bar graph and mAb0123; right
bar graph. Data are presented as mean.+-.sem with the number of
blood donors ranging from 2 to 4 in the different groups.
[0028] FIG. 15: FVIIa-Fab9015 dose-dependently reduced bleeding
time (left) and blood loss (right) in TLT-1 KOKI mice with antibody
induced haemopilia compared to haemopilic mice receiving vehicle. A
dose of 20 nmol/kg FVIIa-Fab9015 was significantly more effective
compared to 20 nmol/kg rFVIIa.
[0029] FIG. 16: Platelet counts in transient haemophilic TLT-1 KOKI
mice dosed with FVIIa-Fab9015 (20 or 4 nmol/kg), rFVIIa (20
nmol/kg) or vehicle. The mice were dosed at -5 min, bleeding was
observed from 0 to 30 min, and platelet counts were observed for
120 min after induction of bleeding.
[0030] FIG. 17A: The bar-graph show peak amount thrombin generated
by 25 nM of either rFVIIa (unfilled bar) or FVIIa-Fab9015 (filled
bar). The thrombin generation was measured under induced
haemophilia A conditions (sheep anti-human FVIII polyclonal
antibodies) with a fixed platelet concentration of 150000
plts/.mu.l. The reaction was started with platelet activation
through the addition of PAR-1 activating peptide SFLLRN (30 .mu.M)
and the GPIV agonist Convulxin (100 ng/ml).
[0031] FIG. 17B: The bar-graph show peak amount thrombin generated
by 5 nM of either rFVIIa (unfilled bar) or FVIIa-Fab9015 (filled
bar). The thrombin generation was measured under haemophilia A
conditions with a fixed platelet concentration of 150000
plts/.mu.l. The reaction was started with platelet activation
through the addition of PAR-1 activating peptide SFLLRN (30 .mu.M)
and the GPIV agonist Convulxin (100 ng/ml).
[0032] FIG. 18: The figure shows that the effect of FVIIa-Fab9015
was dependent on platelet activation. 25 nM FVIIa-Fab9015 was added
to human platelet rich plasma (150000 plts/.mu.l) made haemophilia
A like though addition of sheep anti-human FVIII antibodies.
Samples with unactivated platelets show poor thrombin generation
(dotted line), PAR-1 activating peptide SFLLRN (10 .mu.M) gives
some increase in thrombin generation (broken line) and platelets
activated with both SFLLRN (30 .mu.M) and the GPVI agonist
Convulxin (100 ng/ml) gives the largest thrombin generation (solid
line).
[0033] FIG. 19: The figure shows that the increase in thrombin
generation with FVIIa-Fab9015 compared to rFVIIa was TLT-1
dependent. The original traces show thrombin generation in human
platelet rich plasma (150000 plts/.mu.l) made haemophilc A like
through the addition of sheep anti-human FVIII polyclonal
antibodies. Thrombin generation was started by the addition of
PAR-1 activating peptide SFLLRN (30 .mu.M) and GPVI agonist
Convulxin (100 ng/ml). As shown by the traces, FVIIa-Fab9015 (5 nM)
(solid line) gives a significant larger thrombin peak than rFVIIa
(5 nM) (dotted line). By pre-incubating the samples with soluble
TLT-1 (100 nM) the FVIIa-Fab9015 thrombin generating capacity was
significantly reduced (broken line). This confirms that the 9015
effect is dependent on TLT-1 binding on the activated platelet.
[0034] FIG. 20: The figure shows that the increase in thrombin
generation with FIX-Fab0155 compared to rFIX was TLT-1 dependent.
The original traces show thrombin generation in FIX deficient
plasma containing human platelets (150000 plts/.mu.l). Thrombin
generation was started by the addition of PAR-1 activating peptide
SFLLRN (30 .mu.M) and GPVI agonist Convulxin (100 ng/ml). As shown
by the traces, 1 nM FIX-Fab0155 (solid line) gives a significant
larger thrombin peak than rFIX (grey line). Pre-incubation of
soluble TLT-1 (100 nM) significantly reduced the thrombin
generation capacity of FIX-Fab0155 (broken line) confirming TLT-1
dependency.
[0035] FIG. 21: Autoactivation of FVII-Fab5001 fusion protein in
the presence of soluble Tissue Factor (sTF). Proteolytic activity
was measured in the presence of phospholipids (PC:PS) and sTF.
Results are averages of two independent measurements and given in
relative k.sub.cat/K.sub.m values compared to wtFVIIa.
[0036] FIG. 22A: None of the TLT-1 antibodies (mAb0023, mAb0051,
mAb0061, mAb0062) affect platelet aggregation. The figure shows
original traces from light transmission measurements in platelet
rich plasma where the platelets have been activated with SFLLRN (1
.mu.M). The samples were pre-incubated with anti-TLT-1 antibody or
irrelevant control antibody (10 nM) 3 min before platelet
activation.
[0037] FIG. 22B: None of the TLT-1 antibodies (mAb0023, mAb0051,
mAb0061, mAb0062) affects platelet aggregation. The figure shows
original traces from light transmission measurements in platelet
rich plasma in which the platelets have been activated with SFLLRN
(10 .mu.M). The samples have been pre-incubated with anti-TLT-1
antibody or irrelevant control antibody (10 nM) 3 min before
platelet activation
[0038] FIG. 23: Effect of FIX-mAb0145 on TF-induced fibrin clot
formation in human whole blood (HWB) from a normal donor measured
by thromb-elastography (TEG). The R time obtained from TEG traces
with normal HWB and "hemophilia" blood supplemented with various
concentrations of FIX-mAb0145 or rFIX are shown.
[0039] FIG. 24: The bar-graph show peak amount thrombin generated
by 25 nM of the FVIIa-Fab9015, FVIIa-Fab1029 and FVIIa-Fab1001. All
three constructs showed increased potency compared to rFVIIa (25
nM). The thrombin generation was measured under induced haemophilia
A conditions (sheep anti-human FVIII polyclonal antibodies) with a
fixed platelet concentration of 150000 plts/.mu.l. The reaction was
started with platelet activation through the addition of PAR-1
activating peptide SFLLRN (30 .mu.M) and the GPIV agonist Convulxin
(100 ng/ml). The bars show mean.+-.SD of peak thrombin generation
(n=2-5).
[0040] FIG. 25: The figure shows that increased potency of the
FVIIa-Fab5001 compared to wild-type rFVIIa. The original traces
show thrombin generation in factor VIII deficient plasma containing
washed human platelets (150000 plts/.mu.l). In the activated
samples thrombin generation was started by the addition of the
PAR-1 activating peptide SFLLRN (30 .mu.M) and the GPVI agonist
Convulxin (100 ng/ml). As shown by the traces FVIIa-Fab5001 (25 nM)
(solid line) gives approximately a four fold larger thrombin peak
than wild-type rFVIIa (25 nM) (dotted line). There was no
enhancement of the potency with unactivated platelets (broken
line).
SEQUENCES
[0041] The sequences are as follows:
[0042] SEQ ID NO: 1 provides the nucleotide sequence of human
(h)TLT-1.
[0043] SEQ ID NO: 2 provides the amino acid sequence of hTLT-1.
[0044] SEQ ID NO: 3 provides the nucleotide sequence of the
extracellular domain of hTLT-1-His6. SEQ ID NO: 4 provides the
amino acid sequence of the extracellular domain of hTLT-1-His6.
[0045] SEQ ID NOs: 5 to 8 provide the amino acid sequences of
hTLT-1 fragments: hTLT-1.20-125, hTLT-1.16-162, hTLT-1.126-162 and
hTLT-1.129-142.
[0046] SEQ ID NO: 9 provides the nucleotide sequence of the
variable domain of mAb 0012 LC.
[0047] SEQ ID NO: 10 provides the amino acid sequence of the
variable domain of mAb0012 LC.
[0048] SEQ ID NO: 11 provides the nucleotide sequence of the
variable domain of 0012 HC.
[0049] SEQ ID NO: 12 provides the amino acid sequence of the
variable domain of 0012 HC.
[0050] SEQ ID NO: 13 provides the nucleotide sequence of the heavy
chain of mAb0012.
[0051] SEQ ID NO: 14 provides the nucleotide sequence of the light
chain of mAb0012 and Fab0012.
[0052] SEQ ID NO: 15 provides the nucleotide sequence of the heavy
chain of mAb0023.
[0053] SEQ ID NO: 16 provides the nucleotide sequence of the light
chain of mAb0023 and Fab0023.
[0054] SEQ ID NO: 17 provides the nucleotide sequence of the heavy
chain of mAb0051.
[0055] SEQ ID NO: 18 provides the nucleotide sequence of the light
chain of mAb0051 and Fab0051.
[0056] SEQ ID NO: 19 provides the nucleotide sequence of the heavy
chain of mAb0052.
[0057] SEQ ID NO: 20 provides the nucleotide sequence of the heavy
chain of mAb0062.
[0058] SEQ ID NO: 21 provides the nucleotide sequence of the light
chain of mAb0052, Fab0052 and mAb0062.
[0059] SEQ ID NO: 22 provides the nucleotide sequence of the heavy
chain of mAb0061.
[0060] SEQ ID NO: 23 provides the nucleotide sequence of the heavy
chain of mAb0082.
[0061] SEQ ID NO: 24 provides the nucleotide sequence of the light
chain of mAb0061, Fab0061, mAb0082 and Fab0082.
[0062] SEQ ID NO: 25 provides the nucleotide sequence of Fab0012
VH-CH1.
[0063] SEQ ID NO: 26 provides the nucleotide sequence of Fab0023
VH-CH1.
[0064] SEQ ID NO: 27 provides the nucleotide sequence of Fab0051
VH-CH1.
[0065] SEQ ID NO: 28 provides the nucleotide sequence of Fab0052
VH-CH1.
[0066] SEQ ID NO: 29 provides the nucleotide sequence of Fab0061
VH-CH1.
[0067] SEQ ID NO: 30 provides the nucleotide sequence of Fab0082
VH-CH1.
[0068] SEQ ID NO: 31 provides the nucleotide sequence of hIgG4
hinge-CH2-CH3.
[0069] SEQ ID NO: 32 provides the amino acid sequence of mAb0012,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0070] SEQ ID NO: 33 provides the amino acid sequence of mAb0012,
LC (mouse VL-human Kappa CL) and Fab0012, LC (mouse VL-human Kappa
CL).
[0071] SEQ ID NO: 34 provides the amino acid sequence of mAb0023,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0072] SEQ ID NO: 35 provides the amino acid sequence of mAb0023,
LC (mouse VL-human Kappa CL) and Fab0023, LC (mouse VL-human Kappa
CL).
[0073] SEQ ID NO: 36 provides the amino acid sequence of mAb0051,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0074] SEQ ID NO: 37 provides the amino acid sequence of mAb0051,
LC (mouse VL-human Kappa CL) and Fab0051, LC (mouse VL-human Kappa
CL).
[0075] SEQ ID NO: 38 provides the amino acid sequence of mAb0052,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0076] SEQ ID NO: 39 provides the amino acid sequence of mAb0052,
LC (mouse VL-human Kappa CL); Fab0052, LC (mouse VL-human Kappa
CL); mAb0062, LC (mouse VL-human Kappa CL).
[0077] SEQ ID NO: 40 provides the amino acid sequence of mAb0061,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0078] SEQ ID NO: 41 provides the amino acid sequence of mAb0061,
LC (mouse VL-human Kappa CL); Fab0061, LC (mouse VL-human Kappa CL)
and mAb0082, LC (mouse VL-human Kappa CL); Fab0082, LC (mouse
VL-human Kappa CL).
[0079] SEQ ID NO: 42 provides the amino acid sequence of mAb0062,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0080] SEQ ID NO: 43 provides the amino acid sequence of mAb0082,
HC (mouse VH-human IgG4 CH1-CH2-CH3).
[0081] SEQ ID NO: 44 provides the amino acid sequence of Fab0012,
mouse VH-human IgG4 CH1.
[0082] SEQ ID NO: 45 provides the amino acid sequence of Fab0023,
mouse VH-human IgG4 CH1.
[0083] SEQ ID NO: 46 provides the amino acid sequence of Fab0051,
mouse VH-human IgG4 CH1.
[0084] SEQ ID NO: 47 provides the amino acid sequence of Fab0052,
mouse VH-human IgG4 CH1.
[0085] SEQ ID NO: 48 provides the amino acid sequence of Fab0082,
mouse VH-human IgG4 CH1.
[0086] SEQ ID NOs: 49-58 provide the amino acid sequences of
optional linkers L2-L10. Optional linkers are numbered and listed
in Table 3.
[0087] SEQ ID NO: 59 provides the amino acid sequence of
purification tag HPC4.
[0088] SEQ ID NOs: 60-145 provide the nucleic acid sequences of the
primers used during the development of the expression constructs
described in examples 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 17,
18, 19, 20, 24, 25.
[0089] SEQ ID NO: 146 provides the amino acid sequence of Fab0061
VH-CH1.
[0090] SEQ ID NO: 147 provides the amino acid sequence of
hIgG4-hinge-CH2-CH3.
[0091] SEQ ID NO: 148 provides the amino acid sequence of a His6
tag.
[0092] SEQ ID NO: 149 provides the amino acid sequence of
hTLT-1.18-188.
[0093] SEQ ID NO: 150 provides the nucleic acid sequence of primer
no. 1004.
[0094] SEQ ID NO: 151 provides the nucleic acid sequence of primer
no. 1005.
[0095] SEQ ID NO: 152 provides the amino acid sequence of Fab0100
HC.
[0096] SEQ ID NO: 153 provides the amino acid sequence of Fab0100
LC.
[0097] SEQ ID NO: 154 provides the nucleic acid sequence of wild
type human Factor FV.
[0098] SEQ ID NO: 155 provides the amino acid sequence of wild type
human Factor FV.
[0099] SEQ ID NO: 156 provides the nucleic acid sequence of wild
type human Factor FVII.
[0100] SEQ ID NO: 157 provides the amino acid sequence of wild type
human Factor FVII.
[0101] SEQ ID NO: 158 provides the nucleic acid sequence of wild
type human Factor FVIII.
[0102] SEQ ID NO: 159 provides the amino acid sequence of wild type
human Factor FVIII.
[0103] SEQ ID NO: 160 provides the nucleic acid sequence of wild
type human Factor FIX.
[0104] SEQ ID NO: 161 provides the amino acid sequence of wild type
human Factor FIX.
[0105] SEQ ID NO: 162 provides the nucleic acid sequence of wild
type human Factor FX.
[0106] SEQ ID NO: 163 provides the amino acid sequence of wild type
human Factor FX.
[0107] SEQ ID NO: 164 provides the nucleic acid sequence of wild
type human Factor FXI.
[0108] SEQ ID NO: 165 provides the amino acid sequence of wild type
human Factor FXI.
[0109] SEQ ID NO: 166 provides the 0012LC.C36A-HPC4 DNA
sequence.
[0110] SEQ ID NO: 167 provides the 0012LC.C36A-HPC4 amino acid
sequence.
[0111] SEQ ID NO: 168 provides the 0012VH-CH1-HPC4 DNA
sequence.
[0112] SEQ ID NO: 169 provides the 0012VH-CH1-HPC4 amino acid
sequence.
[0113] SEQ ID NO: 170 provides the 0012VH.T60N-CH1-YGPPC DNA
sequence.
[0114] SEQ ID NO: 171 provides the 0012VH.T60N-CH1-YGPPC.
[0115] SEQ ID NO: 172 provides the FIX-L4b-0012LC DNA sequence.
[0116] SEQ ID NO: 173 provides the FIX-L4b-0012LC amino acid
sequence.
[0117] SEQ ID NO: 174 provides the amino acid sequence of 0003
Fab-LC: 0062Fab-LC-HPC4.
[0118] SEQ ID NO: 175 provides the amino acid sequence of 0003
Fab-HC: 0062Fab-VH-CH1-YGPPC.
[0119] SEQ ID NO: 176 provides the amino acid sequence of
0197-0000-0074 Fab-HC: 0197-0000-0051 Fab-VH-CH1-YGPPC.
[0120] SEQ ID NO: 177 provides the amino acid sequence of 0074
Fab-LC: 0051Fab-LC-HPC4.
[0121] SEQ ID NO: 178 provides the amino acid sequence of 0004
Fab-HC: 0023Fab-VH-CH 1-YGPPC.
[0122] SEQ ID NO: 179 provides the amino acid sequence of
0004Fab-LC: 0023Fab-LC-HPC4.
[0123] SEQ ID NO: 180 provides the amino acid sequence of human
FVII-L4b-0062VH-CH1-HPC4.
[0124] SEQ ID NO: 181 provides the amino acid sequence of human
FVII 407C.
[0125] SEQ ID NO: 182 provides the amino acid sequence of human
FIX-L4b-0061LC.
DESCRIPTION OF THE INVENTION
[0126] Procoagulant proteins of the current invention comprise at
least one coagulation factor, or functional variant thereof, and an
antibody, or a fragment thereof, that is capable of binding to a
receptor that is only present (in the ubiquitous sense of the word)
on a platelet undergoing the morphological and functional changes
associated with activation or an activated platelet. Such receptors
might originate from the alpha- or dense granules of resting
platelets, one particular example of such a receptor is TREM-like
transcript 1 (TLT-1).
[0127] The procoagulant molecules may be fusion proteins. The term
"fusion protein" herein refers to proteins that are created through
the in-frame joining of two or more DNA sequences, which originally
encode separate proteins or peptides, or fragments thereof.
Translation of the fusion protein DNA sequence will result in a
single protein sequence, which may have functional properties
derived from each of the original proteins or peptides. DNA
sequences encoding fusion proteins may be created artificially by
standard molecular biology methods such as overlapping PCR or DNA
ligation and the assembly is performed excluding the stop codon in
the first 5'-end DNA sequence while retaining the stop codon in the
3' end DNA sequence. The resulting fusion protein DNA sequence may
be inserted into an appropriate expression vector that supports the
heterologous fusion protein expression in standard host organisms
such as bacteria, yeast, fungus, insect cells or mammalian
cells.
[0128] Fusion proteins may contain a linker or spacer peptide
sequence that separates the protein or peptide parts which define
the fusion protein. The linker or spacer peptide sequence may
facilitate the correct folding of the individual protein or peptide
parts and may make it more likely for the individual protein or
peptide parts to retain their individual functional properties.
Linker or spacer peptide sequences may be inserted into fusion
protein DNA sequences during the in-frame assembly of the
individual DNA fragments that make up the complete fusion protein
DNA sequence, i.e., during overlapping PCR or DNA ligation.
[0129] Alternatively, the procoagulant proteins of the invention
may be conjugates of their constituent coagulation factor and
antibody counterparts, such that coagulation factor and antibody
are manufactured independently of one another and, thereafter,
joined synthetically.
[0130] As mentioned above, the procoagulant molecules of the
invention may specifically bind TREM-like transcript 1 (TLT-1).
Triggering receptors expressed on myeloid cells (TREMs) have a
well-established role in the biology of various myeloid lineages,
playing important roles in the regulation of innate and adaptive
immunity. TLT-1 belongs to the same family of proteins, though the
TLT-1 gene is expressed only in a single lineage, namely
megakaryocytes and thrombocytes (platelets) and is exclusively
found in the alpha-granules of megakaryocytes and platelets. TLT-1
is a transmembrane protein that is exposed on the surface of
activated platelets upon alpha-granule release. To date, TLT-1 has
not been found on the surface of resting platelets or on the
surface of any other cell types.
[0131] The extracellular portion of TLT-1 is known to be composed
of a single, immunoglobulin-like (Ig-like) domain connected to the
platelet cell membrane by a linker region called the stalk (Gattis
et al., Jour Biol Chem, 2006, Vol. 281, No. 19, pp. 13396-13403).
The Ig-like domain of human TLT-1 (hTLT-1) is composed of 105
residues and is attached to the membrane by the 37-amino acid
stalk. Thus, the Ig-like domain of TLT-1 is expected to have
considerable freedom of movement.
[0132] The putative transmembrane segment of hTLT-1 is 20 amino
acids long. TLT-1 also has a cytoplasmic Immune-receptor
Tyrosine-based Inhibitory-Motif (ITIM), which may function as an
intracellular signal transduction motif.
[0133] The role of TLT-1 in platelet biology has not yet been fully
elucidated; it has been shown that TLT-1 binds fibrinogen and it is
believed that TLT-1 plays a role in regulating coagulation and
inflammation at the site of an injury. A soluble form of TLT-1
containing the Ig-like domain has been reported (Gattis et al.,
Jour Biol Chem, 2006, Vol. 281, No. 19, pp. 13396-13403). The
specific functions of soluble versus platelet-bound TLT-1 remain to
be established.
[0134] Giomerarelli at al. (Thrombosis and Haemostasis (2007) 97,
955-963) reported the generation of anti-TLT-1 scFv molecules using
phage display techniques. Some of the anti-TLT-1 scFv molecules
were found to inhibit thrombin-mediated human platelet aggregation.
Thus, anti-TLT-1 scFc molecules with such features may have
anti-thrombotic properties, similar to anti-GPIIb/IIIa scFv
molecules described by Schwartz et al. (FASEB Journal, (2004), 18,
1704-1706).
[0135] The present invention relates to fusions proteins or
conjugates comprising a coagulation factor attached to an
anti-TLT-1 antibody, or antigen binding fragments thereof,
including scFv. The anti-TLT-1 antibody or fragments thereof serve
to target the linked clotting factor to the surface of activated
platelets by binding to TLT-1 with the purpose of delivering a
procoagulant activity at the activated platelet surface. In this
context, inhibition of platelet aggregation is not a desirable
property of the anti-TLT-1 antibody. Thus, anti-TLT-1 antibodies of
the current invention are preferably not interfering with functions
of TLT-1, and in particular do not inhibit platelet
aggregation.
[0136] A receptor such as TLT-1 comprises epitopes that are useful
targets for the procoagulant proteins of the current invention.
Procoagulant proteins may bind any part of TLT-1 that would be
available for binding in vivo, such as surface accessible residues
of the Ig-like domain, or part of the stalk. Hence, fusion proteins
may bind one or more residues within TLT-1 (20-125), TLT-1
(16-162), TLT-1 (126-162) and/or TLT-1 (129-142) (numbers in
parenthesis refer to amino acid residues in SEQ ID NO: 2).
[0137] In a preferred embodiment, procoagulant proteins bind the
stalk of TLT-1, such as one or more residues of TLT-1 (126-162) or
TLT-1 (129-142). Procoagulant proteins that bind to the stalk of
TLT-1 are unlikely to interfere with the function of the Ig-like
domain. In another preferred embodiment, fusing the coagulation
factor to the C-terminal of an antibody, or fragment thereof, will
position the coagulation factor even more favourably on the cell
surface of activated platelets, relative to that of FVII and
FVIIa.
[0138] In another preferred embodiment, procoagulant proteins of
the invention bind to TLT-1 without interfering platelet
aggregation.
[0139] In another embodiment the procoagulant proteins of the
invention bind to TLT-1 without competing with fibrinogen binding
to TLT-1.
[0140] In terms of the current invention, TLT-1 may be from any
vertebrate, such as any mammal, such as a rodent (such as a mouse,
rat or guinea pig), a lagomorph (such as a rabbit), an artiodactyl
(such as a pig, cow, sheep or camel) or a primate (such as a monkey
or human being). TLT-1 is, preferably, human TLT-1. TLT-1 may be
translated from any naturally occurring genotype or allele that
gives rise to a functional TLT-1 protein. A non-limiting example of
one human TLT-1 is the polypeptide sequence of SEQ ID NO: 2. SEQ ID
NO: 2 includes the signal peptide (residues 1-15 (MGLTLLLLLLLGLEG)
of SEQ ID NO: 2, and the mature TLT-1 polypeptide corresponds to
residues 16-311 of SEQ ID NO: 2.
[0141] Procoagulant proteins of the invention comprise an antibody,
or a fragment thereof, that has been raised against TLT-1. The
antibody or fragment thereof may or may not result in a change in
the conformational structure of TLT-1. Furthermore, the antibody or
fragment thereof may or may not result in intracellular signalling,
as a result of binding to TLT-1. In one embodiment, the antibody or
fragment thereof is capable of binding to the stalk of TLT-1.
Hence, the antibody or fragment thereof utilises a naturally
occurring receptor, or portion thereof, in order to achieve the
effect that is unique to and provided by the current invention.
[0142] The term "antibody" herein refers to a protein, derived from
a germline immunoglobulin sequence, that is capable of specifically
binding to an antigen which is TLT-1 or a portion thereof. The term
includes full length antibodies of any isotype (that is, IgA, IgE,
IgG, IgM and/or IgY) and any fragment or single chain thereof.
[0143] Full-length antibodies usually comprise at least four
polypeptide chains: that is, two heavy (H) chains and two light (L)
chains that are interconnected by disulfide bonds.
[0144] One immunoglobulin sub-class of particular pharmaceutical
interest is the IgG family, which may be sub-divided into isotypes
IgG1, IgG2, IgG3 and IgG4. IgG molecules are composed of two heavy
chains, interlinked by two or more disulfide bonds, and two light
chains, each attached to a heavy chain by a disulfide bond. A heavy
chain may comprise a heavy chain variable region (VH) and up to
three heavy chain constant (CH) regions: CH1, CH2 and CH3. A light
chain may comprise a light chain variable region (VL) and a light
chain constant region (CL). VH and VL regions can be further
subdivided into regions of hypervariability, termed complementarity
determining regions (CDRs), interspersed with regions that are more
conserved, termed framework regions (FR). VH and VL regions are
typically composed of three CDRs and four FRs, arranged from
amino-terminus to carboxy-terminus in the following order: FR1,
CDR1, FR2, CDR2, FR3, CDR3, FR4. The hypervariable regions of the
heavy and light chains form a domain that is capable of interacting
with an antigen (TLT-1), whilst the constant region of an antibody
may mediate binding of the immunoglobulin to host tissues or
factors, including but not limited to various cells of the immune
system (effector cells), Fc receptors and the first component (Clq)
of the classical complement system.
[0145] The antibody component of the procoagulant proteins may be a
monoclonal antibody. Such an antibody may be a chimeric antibody, a
CDR-grafted antibody, a human antibody, a humanised antibody or an
antigen binding portion of any thereof. For the production of
antibodies, the experimental animal is a suitable mammal such as a
goat, rabbit, rat or mouse.
[0146] In structural terms, a monoclonal antibody is represented by
a single molecular species having a single binding specificity and
affinity for a particular epitope. Monoclonal antibodies (mAbs) for
the procoagulant proteins of the invention can be produced by a
variety of well-known techniques, including conventional monoclonal
antibody methodology e.g., the standard somatic cell hybridization
technique of Kohler and Milstein (1975) Nature 256: 495, or viral
or oncogenic transformation of B lymphocytes. The preferred animal
system for preparing hybridomas is the murine system. Hybridoma
production in the mouse is a very well-established procedure.
Immunization protocols and techniques for isolation of immunized
splenocytes for fusion are known in the art. Fusion partners (e.g.,
murine myeloma cells) and fusion procedures are also known.
[0147] To generate hybridomas producing suitable monoclonal
antibodies, splenocytes and/or lymph node cells from immunized mice
can be isolated and fused to an appropriate immortalized cell line,
such as a mouse myeloma cell line. The resulting hybridomas can be
screened for the production of antigen-specific antibodies. The
antibody secreting hybridomas can be replated, screened again, and
if still positive for suitable IgG, the monoclonal antibodies can
be subcloned at least twice by limiting dilution. The stable
subclones can then be cultured in vitro to generate small amounts
of antibody in tissue culture medium for characterization.
[0148] Antibodies for the invention may be prepared, expressed,
created or isolated by recombinant means, such as (a) antibodies
isolated from an animal (e.g., a mouse) that is transgenic or
transchromosomal for the immunoglobulin genes of interest or a
hybridoma prepared therefrom, (b) antibodies isolated from a host
cell transformed to express the antibody of interest, e.g., from a
transfectoma, (c) antibodies isolated from a recombinant,
combinatorial antibody library, and (d) antibodies prepared,
expressed, created or isolated by any other means that involve
splicing of immunoglobulin gene sequences to other DNA
sequences.
[0149] Several suitable monoclonal antibodies, shown in Table 1,
are herein identified by means of the prefix "mAb" together with a
4-digit number. Hence, the monoclonal antibody may be mAb0012 or a
variant thereof. The monoclonal antibody may be mAb0023 or a
variant thereof. The monoclonal antibody may be mAb0051 or a
variant thereof. The monoclonal antibody may be mAb0061 or a
variant thereof. The monoclonal antibody may be mAb0062 or a
variant thereof. The monoclonal antibody may be mAb0082 or a
variant thereof.
TABLE-US-00001 TABLE 1 Non-limiting examples of suitable monoclonal
antibodies mAb ID HC LC 0012 SEQ ID NO: 32 SEQ ID NO: 33 0023 SEQ
ID NO: 34 SEQ ID NO: 35 0051 SEQ ID NO: 36 SEQ ID NO: 37 0052 SEQ
ID NO: 38 SEQ ID NO: 39 0061 SEQ ID NO: 40 SEQ ID NO: 41 0062 SEQ
ID NO: 42 SEQ ID NO: 39 0082 SEQ ID NO: 43 SEQ ID NO: 41
[0150] The term "antigen-binding portion" of an antibody refers to
one or more fragments of an antibody that retain the ability to
specifically bind to an antigen, such as TLT-1 or another target
receptor, as described herein. It has been shown that the
antigen-binding function of an antibody can be performed by
fragments of a full-length antibody. The antibody component of the
procoagulant proteins may therefore be a fragment of an antibody,
such as a fragment of a monoclonal antibody. Examples of binding
fragments encompassed within the term "antigen-binding portion" of
an antibody include a Fab fragment, a F(ab').sub.2 fragment, a Fab'
fragment, a Fd fragment, a Fv fragment, a ScFv fragment, a dAb
fragment and an isolated complementarity determining region (CDR).
Single chain antibodies such as scFv and heavy chain antibodies
such as VHH and camel antibodies are also intended to be
encompassed within the term "antigen-binding portion" of an
antibody. These antibody fragments may be obtained using
conventional techniques known to those of skill in the art, and the
fragments may be screened for utility in the same manner as intact
antibodies.
[0151] A "Fab" fragment includes a variable domain and a constant
domain of the light chain and a variable domain and the first
constant domain (CH1) of the heavy chain. A Fab' fragment includes
one or more carboxy terminal disulphide linkages to the heavy or
light chains. F(ab').sub.2 antibody fragments comprise a pair of
Fab fragments that are generally covalently linked near their
carboxy termini by hinge cysteines. Other chemical couplings of
antibody fragments are also known in the art.
[0152] An "Fv" fragment is an antibody fragment that contains a
complete antigen recognition and binding site, and generally
comprises a dimer of one heavy and one light chain variable domain
in tight association that can be covalent in nature, for example in
a single chain variable domain fragment (scFv). It is in this
configuration that the three hypervariable regions of each variable
domain interact to define an antigen-binding site on the surface of
the V.sub.H-V.sub.L dimer. Collectively, the six hypervariable
regions or a subset thereof confer antigen binding specificity to
the antibody. However, even a single variable domain comprising
only three hypervariable regions specific for an antigen has the
ability to recognize and bind antigen, although usually at a lower
affinity than the entire binding site (Cai & Garen, Proc. Natl.
Acad. Sci. USA, 93: 6280-6285, 1996). For example, naturally
occurring camelid antibodies that only have a heavy chain variable
domain (VHH) can bind antigen (Desmyter et al., J. Biol. Chem.,
277: 23645-23650, 2002; Bond et al., J. Mol. Biol. 2003; 332:
643-655).
[0153] "Single-chain Fv" or "scFv" antibody fragments comprise the
V.sub.H and V.sub.L domains of an antibody, where these domains are
present in a single polypeptide chain. Generally, the Fv
polypeptide further comprises a polypeptide linker between the
V.sub.H and V.sub.L domains that enables the scFv to form the
desired structure for antigen binding. For a review of scFv, see
Pluckthun, 1994, In: The Pharmacology of Monoclonal Antibodies,
Vol. 113, Rosenburg and Moore eds. Springer-Verlag, New York, pp.
269-315.
[0154] The term "diabodies" refers to small antibody fragments with
two antigen-binding sites, in which fragments comprise a heavy
chain variable domain (V.sub.H) connected to a light chain variable
domain (V.sub.L) in the same polypeptide chain (V.sub.H and
V.sub.L). By using a linker that is too short to allow pairing
between the two variable domains on the same chain, the variable
domains are forced to pair with complementary domains of another
chain, creating two antigen-binding sites. Diabodies are described
more fully, for example, in EP 404,097; WO 93/11161; and Hollinger
et al., 1993, Proc. Natl. Acad. Sci. USA, 90:6444-6448.
[0155] The expression "linear antibodies" refers to antibodies as
described in Zapata et al., 1995, Protein Eng., 8(10):1057-1062.
Briefly, these antibodies contain a pair of tandem Fd segments
(V.sub.H-C.sub.H1-V.sub.H-C.sub.H1) that, together with
complementary light chain polypeptides, form a pair of antigen
binding regions. Linear antibodies can be bispecific or
monospecific.
[0156] The term "monobody" as used herein, refers to an antigen
binding molecule with a heavy chain variable domain and no light
chain variable domain. A monobody can bind to an antigen in the
absence of light chains and typically has three hypervariable
regions, for example CDRs designated CDRH1, CDRH2, and CDRH3. A
heavy chain IgG monobody has two heavy chain antigen binding
molecules connected by a disulfide bond. The heavy chain variable
domain comprises one or more hypervariable regions, preferably a
CDRH3 or HVL-H3 region.
[0157] The term "hypervariable region", when used herein, refers to
the amino acid residues of an antibody that are responsible for
antigen-binding. The hypervariable region comprises amino acid
residues from a "complementarity-determining region" or "CDR"
(defined by sequence as residues 24-34 (L1), 50-56 (L2) and 89-97
(L3) in the light chain variable domain and 31-35 (H1), 50-65 (H2)
and 95-102 (H3) in the heavy chain variable domain; Kabat et al.,
Sequences of Proteins of Immunological Interest, 5th Ed. Public
Health Service, National Institutes of Health, Bethesda, Md.
(1991)) and/or those residues from a "hypervariable loop" (defined
by structure and differing for each antibody; see, for example:
Chothia and Lesk, 1987, J. Mol. Biol. 196:901-917). In one example,
HVL residues can include, 26-32 (L1), 50-52 (L2) and 91-96 (L3) in
the light chain variable domain and 26-32 (H1), 53-55 (H2) and
96-101 (H3) in the heavy chain variable domain.
[0158] In one embodiment of the invention, the TLT-1 binding
portion of the procoagulant protein is a Fab fragment. Several
suitable Fab fragments, shown in Table 2, are herein identified by
means of the prefix "Fab" together with a 4-digit number. The Fab
fragment may be Fab0003 or a variant thereof. The Fab fragment may
be Fab0004 or a variant thereof. The Fab fragment may be Fab0012 or
a variant thereof. The Fab fragment may be Fab0023 or a variant
thereof. The Fab fragment may be Fab0051 or a variant thereof. The
Fab fragment may be Fab0052 or a variant thereof. The Fab fragment
may be Fab0061 or a variant thereof. The Fab fragment may be
Fab0062 or a variant thereof. The Fab fragment may be Fab0074 or a
variant thereof. The Fab fragment may be Fab0082 or a variant
thereof. The Fab fragment may be Fab0084 or a variant thereof.
TABLE-US-00002 TABLE 2 Non-limiting examples of suitable Fab
fragments Fab ID VH-CH1 LC Fab0003 SEQ ID NO: 175 SEQ ID NO: 174
Fab0004 SEQ ID NO: 178 SEQ ID NO: 179 Fab0012 SEQ ID NO: 44 SEQ ID
NO: 33 Fab0023 SEQ ID NO: 45 SEQ ID NO: 35 Fab0051 SEQ ID NO: 46
SEQ ID NO: 37 Fab0052 SEQ ID NO: 47 SEQ ID NO: 39 Fab0061 SEQ ID
NO: 146 SEQ ID NO: 41 Fab0074 SEQ ID NO: 176 SEQ ID NO: 177 Fab0082
SEQ ID NO: 48 SEQ ID NO: 41 Fab0084 SEQ ID NO: 171 SEQ ID NO:
167
[0159] As mentioned above, an antibody for the invention may be a
human antibody or a humanised antibody. The term "human antibody",
as used herein, is intended to include antibodies that have
variable regions in which both the framework and CDR regions are
derived from human germline immunoglobulin sequences. Furthermore,
if the antibody contains a constant region, the constant region is
also derived from human germline immunoglobulin sequences. The
human antibodies of the invention may include amino acid residues
not encoded by human germline immunoglobulin sequences (e.g.,
mutations introduced by random or site-specific mutagenesis in
vitro or by somatic mutation in vivo). However, the term "human
antibody", as used herein, is not intended to include antibodies in
which CDR sequences derived from the germline of another mammalian
species, such as a mouse, have been grafted onto human framework
sequences.
[0160] Such a human antibody may be a human monoclonal antibody.
Such a human monoclonal antibody may be produced by a hybridoma
which includes a B cell obtained from a transgenic nonhuman animal,
e.g., a transgenic mouse whose genome comprises a human heavy chain
transgene and a light chain transgene fused to an immortalized
cell.
[0161] Human antibodies may be prepared by in vitro immunisation of
human lymphocytes followed by transformation of the lymphocytes
with Epstein-Barr virus.
[0162] The term "human antibody derivatives" refers to any modified
form of the human antibody, e.g., a conjugate of the antibody and
another agent or antibody.
[0163] The term "humanized antibody" herein refers to antibodies in
which CDR sequences derived from the germline of another mammalian
species, such as a mouse, have been grafted onto human framework
sequences. Additional framework region modifications may be made
within the human framework sequences.
[0164] Antibodies of the invention can be tested for binding to the
target protein by, for example, standard ELISA or Western blotting.
An ELISA assay can also be used to screen for hybridomas that show
positive reactivity with the target protein. The binding
specificity of an antibody may also be determined by monitoring
binding of the antibody to cells expressing the target protein, for
example, by flow cytometry.
[0165] The specificity of an antibody of the invention for the
target protein may be further studied by determining whether or not
the antibody binds to other proteins. For example, where it is
desired to produce an antibody that specifically binds TLT-1 or a
particular part, e.g. epitope, of TLT-1, the specificity of the
antibody may be assessed by determining whether or not the antibody
also binds to other molecules or modified forms of TLT-1 that lack
the part of interest.
[0166] Polypeptide or antibody "fragments" according to the
invention may be made by truncation of the corresponding monoclonal
antibodies, e.g. by removal of one or more amino acids from the N
and/or C-terminal ends of a polypeptide. Up to 10, up to 20, up to
30, up to 40 or more amino acids may be removed from the N and/or C
terminal in this way. Fragments may also be generated by one or
more internal deletions.
[0167] In terms of the current invention, "epitope" refers to the
area or region on an antigen (Ag), which is a molecular structure
on the surface of an activated platelet, to which the antibody (Ab)
portion of the procoagulant protein is capable of specifically
binding, i.e. the area or region that is in physical contact with
the Ab. An antigen's epitope may comprise amino acid residues in
the Ag that are directly involved in binding to a Ab (the
immunodominant component of the epitope) and other amino acid
residues, which are not directly involved in the binding, such as
amino acid residues of the Ag which are effectively blocked by the
Ab (in other words, the amino acid residue is within the
"solvent-excluded surface" and/or the "footprint" of the Ab). The
term epitope herein includes both types of binding sites within any
particular region of a receptor, such as TLT-1, that specifically
binds to an anti-TLT-1 antibody, or fragment thereof, unless
otherwise stated (e.g., in some contexts the invention relates to
antibodies that bind directly to particular amino acid residues).
Receptors such as TLT-1 may comprise a number of different
epitopes, which may include, without limitation, (1) linear peptide
epitopes, (2) conformational epitopes which include of one or more
non-contiguous amino acids located near each other in the mature
receptor conformation; and (3) posttranslational epitopes, which
include, either in whole or part, of molecular structures
covalently attached to TLT-1, such as carbohydrate groups.
[0168] The epitope for a given antibody (Ab)/antigen (Ag) pair can
be defined and characterized at different levels of detail using a
variety of experimental and computational epitope mapping methods.
The experimental methods include mutagenesis, X-ray
crystallography, Nuclear Magnetic Resonance (NMR) spectroscopy,
Hydrogen deuterium eXchange Mass Spectrometry (HX-MS) and various
competition binding methods. As each method relies on a unique
principle, the description of an epitope is intimately linked to
the method by which it has been determined. Thus, the epitope for a
given Ab/Ag pair will be defined differently depending on the
epitope mapping method employed.
[0169] At its most detailed level, the epitope for the interaction
between the Ag and the Ab can be defined by the spatial coordinates
defining the atomic contacts present in the Ag-Ab interaction, as
well as information about their relative contributions to the
binding thermodynamics. At a less detailed level the epitope can be
characterized by the spatial coordinates defining the atomic
contacts between the Ag and Ab. At a further less detailed level
the epitope can be characterized by the amino acid residues that it
comprises as defined by a specific criterium, e.g. distance between
atoms in the Ab and the Ag. At a further less detailed level the
epitope can be characterized through function, e.g. by competition
binding with other Abs. The epitope can also be defined more
generically as comprising amino acid residues for which
substitution by another amino acid will alter the characteristics
of the interaction between the Ab and Ag.
[0170] In the context of an X-ray derived crystal structure defined
by spatial coordinates of a complex between an Ab, e.g. a Fab
fragment, and its Ag, the term epitope is herein, unless otherwise
specified or contradicted by context, specifically defined as
platelet receptor residues characterized by having a heavy atom
(i.e. a non-hydrogen atom) within a distance of 4 .ANG. from a
heavy atom in the Ab.
[0171] From the fact that descriptions and definitions of epitopes,
dependent on the epitope mapping method used, are obtained at
different levels of detail, it follows that comparison of epitopes
for different Abs on the same Ag can similarly be conducted at
different levels of detail.
[0172] Epitopes described on the amino acid level, e.g. determined
from an X-ray structure, are said to be identical if they contain
the same set of amino acid residues. Epitopes are said to overlap
if at least one amino acid is shared by the epitopes. Epitopes are
said to be separate (unique) if no amino acid residue is shared by
the epitopes.
[0173] Epitopes characterized by competition binding are said to be
overlapping if the binding of the corresponding Ab's are mutually
exclusive, i.e. if binding of one Ab excludes simultaneous binding
of the other Ab. The epitopes are said to be separate (unique) if
the Ag is able to accommodate binding of both corresponding Ab's
simultaneously. Furthermore, there are instances when one or more
antibodies do not have overlapping epitopes but can not bind
simultaneously. Due to tertiary and quaternary structure of an
antigen, one antibody may not be able to access its epitope due to
previous binding of another antibody.
[0174] Procoagulant proteins of the invention may be capable of
binding to the same epitope as mAb0012. Procoagulant proteins may
be capable of binding to the same epitope as mAb0023. Procoagulant
proteins may be capable of binding to the same epitope as mAb0051.
Procoagulant proteins may be capable of binding to the same epitope
as mAb0061. Procoagulant proteins may be capable of binding to the
same epitope as mAb0062. Procoagulant proteins may be capable of
binding to the same epitope as mAb0082.
[0175] The epitope may comprise one or more residues selected from
the group consisting of K133, I134, G135, S136, L137, A138, N140,
A141, F142, S143, D144, P145 and A146 of SEQ ID NO: 4
(corresponding to K133, I134, G135, S136, L137, A138, N140, A141,
F142, S143, D144, P145 and A146 of SEQ ID NO: 2).
[0176] The epitope may comprise one or more residues selected from
the group consisting of V17, Q18, C19, H20, Y21, R22, L23, Q24,
D25, V26, K27, A28, L63, G64, G65, G66, L67, L68, G89, A90, R91,
G92, P93, Q94, I95 and L96 of SEQ ID NO: 5 (corresponding to V36,
Q37, C38, H39, Y40, R41, L42, Q43, D44, V45, K46, A47, L82, G83,
G84, G85, L86, L87, G108, A109, R110, G111, P112, Q113, 1114 and
L115 of SEQ ID NO: 2).
[0177] The epitope may comprise one or more residues selected from
the group consisting of L36, P37, E38, G39, C40, Q41, P42, L43,
V44, S45, S46, A47, V73, T74, L75, Q76, E77, E78, D79, A80, G81,
E82, Y83, G84, C85, M86, R91, G92, P93, Q94, I95, L96, H97, R98,
V99, S100 and L101 of SEQ ID NO: 5 (corresponding to L55, P56, E57,
G58, C59, Q60, P61, L62, V63, S64, S65, A66, V92, T93, L94, Q95,
E96, E97, D98, A99, G100, E101, Y102, G103, C104, M105, R110, G111,
P112, Q113, I114, L115, H116, R117, V118, S119 and L120 of SEQ ID
NO: 2).
[0178] The epitope may comprise one or more residues selected from
the group consisting of V17, Q18, C19, H20, Y21, R22, L23, Q24,
D25, V26, K27, A28, R91, G92, P93, Q94, I95, L96, H97, R98, V99,
S100 and L101 of SEQ ID NO: 5 (corresponding to V36, Q37, C38, H39,
Y40, R41, L42, Q43, D44, V45, K46, A47, R110, G111, P112, Q113,
I1114, L115, H116, R117, V118, S119 and L120 of SEQ ID NO: 2).
[0179] The epitope may comprise one or more residues selected from
the group consisting of E5, T6, H7, K8, I9, G10, S11, L12, A13,
E14, N15, A16, F17, S18, D19 and P20 of SEQ ID NO: 7 (corresponding
to E130, T131, H132, K133, I134, G135, S136, L137, A138, E139,
N140, A141, F142, S143, D144 and P145 of SEQ ID NO: 2).
[0180] The epitope may comprise one or more residues selected from
the group consisting of K8, I9, G10, S11, L12, A13, N15, A16, F17,
S18, D19, P20 and A21 of SEQ ID NO: 7 (corresponding to K133, I134,
G135, S136, L137, A138, N140, A141, F142, S143, D144, P145 and A146
of SEQ ID NO: 2).
[0181] The definition of the term "paratope" is derived from the
above definition of "epitope" by reversing the perspective. Thus,
the term "paratope" refers to the area or region on the Ab to which
an Ag specifically binds, i.e. to which it makes physical contact
to the Ag.
[0182] The paratope may comprise one or more residues selected from
the group consisting of H50, N52, Y56, H58, Y73, F79, S115, T116,
V118 and Y120 of the anti-TLT-1 light (L) chain (SEQ ID NO: 33),
and residues V20, F45, R49, Y50, W51, E68, T75, N77, S116, G117,
V118 and T120 of the anti-TLT-1 heavy (H) chain (SEQ ID NO:
32).
[0183] In the context of an X-ray derived crystal structure defined
by spatial coordinates of a complex between an Ab, e.g. a Fab
fragment, and its Ag, the term paratope is herein, unless otherwise
specified or contradicted by context, specifically defined as Ag
residues characterized by having a heavy atom (i.e. a non-hydrogen
atom) within a distance of 4 .ANG. from a heavy atom in the
platelet receptor.
[0184] The epitope and paratope for a given antibody (Ab)/antigen
(Ag) pair may be identified by routine methods. For example, the
general location of an epitope may be determined by assessing the
ability of an antibody to bind to different fragments or variants
of TLT-1. The specific amino acids within TLT-1 that make contact
with an antibody (epitope) and the specific amino acids in an
antibody that make contact with TLT-1 (paratope) may also be
determined using routine methods, such as those described in the
examples. For example, the antibody and target molecule may be
combined and the Ab/Ag complex may be crystallised. The crystal
structure of the complex may be determined and used to identify
specific sites of interaction between the antibody and its
target.
[0185] Fusion proteins comprising an antibody or fragment thereof
may also be defined in terms of their complementarity-determining
regions (CDRs). The term "complementarity-determining region" or
"hypervariable region" herein refers to the amino acid residues of
an antibody that are responsible for antigen binding. The
complementarity-determining regions or "CDRs" are generally
comprised of amino acid residues 24-34 (L1), 50-56 (L2) and 89-97
(L3) in the light-chain variable domain and 31-35 (H1), 50-65 (H2)
and 95-102 (H3) in the heavy-chain variable domain; (Kabat et al.
(1991) Sequences of Proteins of Immunological Interest, Fifth
Edition, U.S. Department of Health and Human Services, NIH
Publication No. 91-3242) and/or those residues from a
"hypervariable loop" (residues 26-32 (L1), 50-52 (L2) and 91-96
(L3) in the light-chain variable domain and 26-32 (H1), 53-55 (H2)
and 96-101 (H3) in the heavy-chain variable domain; Chothia and
Lesk, J. Mol. Biol. 1987; 196:901-917). Typically, the numbering of
amino acid residues in this region is performed by the method
described in Kabat et al., supra. Phrases such as "Kabat position",
"Kabat residue", and "according to Kabat" herein refer to this
numbering system for heavy chain variable domains or light chain
variable domains. Using the Kabat numbering system, the actual
linear amino acid sequence of a peptide may contain fewer or
additional amino acids corresponding to a shortening of, or
insertion into, a FR or CDR of the variable domain. For example, a
heavy chain variable domain may include amino acid insertions
(residue 52a, 52b and 52c according to Kabat) after residue 52 of
CDR H2 and inserted residues (e.g. residues 82a, 82b, and 82c, etc.
according to Kabat) after heavy chain FR residue 82. The Kabat
numbering of residues may be determined for a given antibody by
alignment at regions of homology of the sequence of the antibody
with a "standard" Kabat numbered sequence.
[0186] The term "framework region" or "FR" residues refer to those
VH or VL amino acid residues that are not within the CDRs, as
defined herein.
[0187] In one embodiment, the heavy chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0188] a CDR1 sequence of amino acids 50 to 54 (DYFMY)
of SEQ ID NO: 34, wherein one of these amino acids may be
substituted by a different amino acid; and/or [0189] a CDR2
sequence of amino acids 69 to 85 (YISNGGDSSSYPDTVKG) of SEQ ID NO:
34, wherein one, two, three or four of these amino acids may be
substituted by a different amino acid; and/or [0190] a CDR3
sequence of amino acids 118 to 129 (NKNWDDYYDMDY) of SEQ ID NO: 34,
wherein one, two or three of these amino acids may be substituted
by a different amino acid.
[0191] In another embodiment, the light chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0192] a CDR1 sequence of amino acids 44 to 60
(KSSQSLLNSRTRKNYLA) of SEQ ID NO: 35, wherein one, two, three or
four of these amino acids may be substituted with a different amino
acid; and/or [0193] a CDR2 sequence of amino acids 76 to 82
(WASTRES) of SEQ ID NO: 35, wherein one or two of these amino acids
may be substituted with a different amino acid; and/or [0194] a
CDR3 sequence of amino acids 115 to 122 (KQSYNLLT) of SEQ ID NO:
35, wherein one or two of these amino acids may be substituted with
a different amino acid.
[0195] In another embodiment, the heavy chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0196] a CDR1 sequence of amino acids 50 to 54 (DYSMH)
of SEQ ID NO: 36, wherein one of these amino acids may be
substituted by a different amino acid; and/or [0197] a CDR2
sequence of amino acids 69 to 85 (VISTYYGDVRYNQKFKG) of SEQ ID NO:
36, wherein one, two, three or four of these amino acids may be
substituted by a different amino acid; and/or [0198] a CDR3
sequence of amino acids 118 to 129 (APMITTGAWFAY) of SEQ ID NO: 36,
wherein one, two or three of these amino acids may be substituted
by a different amino acid.
[0199] In another embodiment, the light chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0200] a CDR1 sequence of amino acids 44 to 54
(KASQSVSNDVA) of SEQ ID NO: 37, wherein one, two or three of these
amino acids may be substituted with a different amino acid; and/or
[0201] a CDR2 sequence of amino acids 70 to 76 (YASSRYT) of SEQ ID
NO: 37, wherein one or two of these amino acids may be substituted
with a different amino acid; and/or [0202] a CDR3 sequence of amino
acids 109 to 117 (QQDYSSPYT) of SEQ ID NO: 37, wherein one or two
of these amino acids may be substituted with a different amino
acid.
[0203] In another embodiment, the heavy chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0204] a CDR1 sequence of amino acids 50 to 54 (SHWIE)
of SEQ ID NO: 42, wherein one of these amino acids may be
substituted by a different amino acid; and/or [0205] a CDR2
sequence of amino acids 69 to 85 (EILPGSGNTNYNEKFKG) of SEQ ID NO:
42, wherein one, two, three or four of these amino acids may be
substituted by a different amino acid; and/or [0206] a CDR3
sequence of amino acids 118 to 130 (GYYGLNYDWYFDV) of SEQ ID NO:
42, wherein one, two or three of these amino acids may be
substituted by a different amino acid.
[0207] In another embodiment, the light chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0208] a CDR1 sequence of amino acids 44 to 54
(RASQDISNYLN) of SEQ ID NO: 39, wherein one, two or three of these
amino acids may be substituted with a different amino acid; and/or
[0209] a CDR2 sequence of amino acids 70 to 76 (YTSRLHS) of SEQ ID
NO: 39, wherein one or two of these amino acids may be substituted
with a different amino acid; and/or [0210] a CDR3 sequence of amino
acids 109 to 117 (QQDTKLPYT) of SEQ ID NO: 39, wherein one or two
of these amino acids may be substituted with a different amino
acid.
[0211] In another embodiment, the heavy chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0212] a CDR1 sequence of amino acids 49 to 53 (RYWMT)
of SEQ ID NO: 40, wherein one of these amino acids may be
substituted by a different amino acid; and/or [0213] a CDR2
sequence of amino acids 68 to 84 (EINPDSSTINYNPSLKD) of SEQ ID NO:
40, wherein one, two, three or four of these amino acids may be
substituted by a different amino acid; and/or [0214] a CDR3
sequence of amino acids 117 to 121 (GVFTS) of SEQ ID NO: 40,
wherein one, two or three of these amino acids may be substituted
by a different amino acid.
[0215] In another embodiment, the light chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0216] a CDR1 sequence of amino acids 43 to 58
(RSSQSLVHRNGNTYFH) of SEQ ID NO: 41, wherein one, two, three or
four of these amino acids may be substituted with a different amino
acid; and/or [0217] a CDR2 sequence of amino acids 74 to 80
(KVSNRFS) of SEQ ID NO: 41, wherein one or two of these amino acids
may be substituted with a different amino acid; and/or [0218] a
CDR3 sequence of amino acids 113 to 121 (SQSTHVPYT) of SEQ ID NO:
41, wherein one or two of these amino acids may be substituted with
a different amino acid.
[0219] In another embodiment, the heavy chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0220] a CDR1 sequence of amino acids 49 to 53 (RYWMT)
of SEQ ID NO: 32, wherein one of these amino acids may be
substituted by a different amino acid; and/or [0221] a CDR2
sequence of amino acids 68 to 84 (EINPDSSTINYTPSLKD) of SEQ ID NO:
32, wherein one, two, three or four of these amino acids may be
substituted by a different amino acid; and/or [0222] a CDR3
sequence of amino acids 117 to 121 (GVFTS) of SEQ ID NO: 32,
wherein one, two or three of these amino acids may be substituted
by a different amino acid.
[0223] In another embodiment, the light chain of an antibody, or
fragment thereof, for the procoagulant proteins of the invention
comprises: [0224] a CDR1 sequence of amino acids 43 to 58
(RSSQSLVHRNGNTYFH) of SEQ ID NO: 33, wherein one, two, three or
four of these amino acids may be substituted with a different amino
acid; and/or [0225] a CDR2 sequence of amino acids 74 to 80
(KVSNRFS) of SEQ ID NO: 33, wherein one or two of these amino acids
may be substituted with a different amino acid; and/or [0226] a
CDR3 sequence of amino acids 113 to 121 (SQSTHVPYT) of SEQ ID NO:
33, wherein one or two of these amino acids may be substituted with
a different amino acid.
[0227] Monoclonal antibodies, or fragments thereof, for the
procoagulant proteins of the current invention may be glycosylation
variants. Glycosylation variants of antibodies are variants in
which the glycosylation pattern of an antibody is altered. By
altering is meant deleting one or more carbohydrate moieties found
in the antibody, adding one or more carbohydrate moieties to the
antibody, changing the composition of glycosylation (glycosylation
pattern), the extent of glycosylation.
[0228] Antibodies are glycosylated at conserved positions in their
constant regions (Jefferis and Lund, Chem. Immunol. 1997;
65:111-128; Wright and Morrison, Trends Biotechnol. 1997;
15:26-32). The oligosaccharide side chains of the immunoglobulins
can affect a protein's function (Boyd et al., Mol. Immunol. 1996;
32:1311-1318), and the intramolecular interaction between portions
of the glycoprotein can affect the conformation and presented
three-dimensional surface of the glycoprotein. Oligosaccharides may
also serve to target a given glycoprotein to certain molecules
based upon specific recognition structures. For example, it has
been reported that in agalactosylated IgG, the oligosaccharide
moiety "flips" out of the inter-CH2 space and terminal
N-acetylglucosamine residues become available to bind mannose
binding protein (Malhotra et al., Nature Med. 1995; 1:237-243).
Removal by glycopeptidase of the oligosaccharides from CAMPATH-1H
(a recombinant humanized murine monoclonal IgG1 antibody which
recognizes the CDw52 antigen of human lymphocytes) produced in
Chinese Hamster Ovary (CHO) cells resulted in a complete reduction
in complement mediated lysis (CMCL) (Boyd et al., Mol. Immunol.
1996; 32:1311-1318), while selective removal of sialic acid
residues using neuraminidase resulted in no loss of DMCL.
Glycosylation of antibodies has also been reported to affect
antibody-dependent cellular cytotoxicity (ADCC). In particular, CHO
cells with tetracycline-regulated expression of
.beta.(1,4)-N-acetylglucosaminyltransferase III (GnTIII), a
glycosyltransferase catalyzing formation of bisecting GlcNAc, was
reported to have improved ADCC activity (Umana et al. Nature
Biotech. 1999; 17:176-180).
[0229] Glycosylation of antibodies is typically either N-linked or
O-linked. N-linked refers to the attachment of the carbohydrate
moiety to the side chain of an asparagine residue. The tripeptide
sequences asparagine-X-serine and asparagine-X-threonine, where X
is any amino acid except proline, are the recognition sequences for
enzymatic attachment of the carbohydrate moiety to the asparagine
side chain. Thus, the presence of either of these tripeptide
sequences in a polypeptide creates a potential glycosylation site.
O-linked glycosylation refers to the attachment of one of the
sugars N-aceylgalactosamine, galactose, or xylose to a hydroxyamino
acid, most commonly serine or threonine, although 5-hydroxyproline
or 5-hydroxylysine may also be used.
[0230] Addition of glycosylation sites to the antibody is
conveniently accomplished by altering the amino acid sequence such
that it contains one or more of the above-described tripeptide
sequences (for N-linked glycosylation sites). The alteration may
also be made by the addition of, or substitution by, one or more
serine or threonine residues to the sequence of the original
antibody (for O-linked glycosylation sites). Similarly, removal of
glycosylation sites can be accomplished by amino acid alteration
within the native glycosylation sites of the antibody.
[0231] The amino acid sequence is usually altered by altering the
underlying nucleic acid sequence. Nucleic acid molecules encoding
amino acid sequence variants of a TLT-1 antibody are prepared by a
variety of methods known in the art. These methods include, but are
not limited to, isolation from a natural source (in the case of
naturally occurring amino acid sequence variants) or preparation by
oligonucleotide-mediated (or site-directed) mutagenesis, PCR
mutagenesis, and cassette mutagenesis of an earlier prepared
variant or a non-variant version of the TLT-1 antibody.
[0232] The glycosylation (including glycosylation pattern) of
antibodies may also be altered without altering the amino acid
sequence or the underlying nucleotide sequence. Glycosylation
largely depends on the host cell used to express the antibody.
Since the cell type used for expression of recombinant
glycoproteins, e.g. antibodies, as potential therapeutics is rarely
the native cell, significant variations in the glycosylation
pattern of the antibodies can be expected (see, e.g. Hse et al., J.
Biol. Chem. 1997; 272:9062-9070). In addition to the choice of host
cells, factors which affect glycosylation during recombinant
production of antibodies include growth mode, media formulation,
culture density, oxygenation, pH, purification schemes and the
like. Various methods have been proposed to alter the glycosylation
pattern achieved in a particular host organism including
introducing or overexpressing certain enzymes involved in
oligosaccharide production (U.S. Pat. Nos. 5,047,335; 5,510,261 and
5,278,299). Glycosylation, or certain types of glycosylation, can
be enzymatically removed from the glycoprotein, for example using
endoglycosidase H (Endo H). In addition, the recombinant host cell
can be genetically engineered, e.g. make defective in processing
certain types of polysaccharides. These and similar techniques are
well known in the art.
[0233] The glycosylation structure of antibodies can be readily
analyzed by conventional techniques of carbohydrate analysis,
including lectin chromatography, NMR, Mass spectrometry, HPLC, GPC,
monosaccharide compositional analysis, sequential enzymatic
digestion, and HPAEC-PAD, which uses high pH anion exchange
chromatography to separate oligosaccharides based on charge.
Methods for releasing oligosaccharides for analytical purposes are
also known, and include, without limitation, enzymatic treatment,
elimination using harsh alkaline environment to release mainly
O-linked structures, and chemical methods using anhydrous hydrazine
to release both N- and O-linked oligosaccharides.
[0234] In addition to their TLT-1-binding portion, which involves a
monoclonal antibody or fragment thereof, procoagulant proteins of
the invention also comprise a coagulation factor component, whose
function is to upregulate blood coagulation in the vicinity of the
activated platelet.
[0235] Coagulation factors of procoagulant fusion proteins or
conjugates of the present invention may be in their inactive form
or in their activated form. The coagulation factor may be a serine
protease, in which case the inactive form of the coagulation factor
corresponds to the zymogen form and the activated form corresponds
to the catalytically active form. The coagulation factor may be a
FVII polypeptide (FVII or FVIIa), a FVIII polypeptide (i.e. FVIII
or FVIIIa), a FIX polypeptide (FIX or FIXa), a FX polypeptide (FX
or FXa) or a FXI polypeptide (FXI or FXIa). FVII, FVIII, FIX, FX
and FXI polypeptides of the present invention also includes
variants, such as truncated variants, and derivatives of said
coagulation factors. FVII, FIX, FX and FXI variants will include
truncated des-Gla variants, i.e. variants of said coagulation
factors lacking the Gla-domain responsible for interaction with
phospholipid membranes of said coagulation factors.
[0236] If the coagulation factor is a FVII polypeptide, the FVII
component may be able to bind to tissue factor and it is,
preferably, able to cleave FIX or FX. If the coagulation factor is
a FVIII polypeptide, the FVIII component is, preferably, able to
bind to FIXa and support cleavage of FX. If the coagulation factor
is a FIXa polypeptide, it is preferably able to cleave FX. If the
coagulation factor is FXa, then it is preferably able to cleave
prothrombin (FII). If the coagulation factor is a FXIa polypeptide
then it is preferably able to cleave FIX.
[0237] In one particular embodiment, the coagulation factor is a FV
polypeptide. Factor V is synthesized by the liver and secreted
Factor V circulates in plasma as a 330-kDa single-chain polypeptide
that is the inactive procoagulant (Huang et al. (2008) Haemophilia
14: 1164-9). FV is composed of 2196 amino acids, including a 28
amino acids signal peptide. It is composed of six domains A1 (Aa
30-329), A2 (Aa 348-684), B (Aa 692-1573), A3 (Aa 1578-1907), C1
(Aa 1907-2061), and C2 (Aa 2066-2221). The A and C domains of the
two proteins are approximately 40% homologous with the equivalent
domains of FVIII, but the B domains are not conserved. As is the
case with FVIII, FV activity is tightly regulated via site-specific
proteolysis. Thrombin, and to a lesser extent Factor Xa (FXa), are
primarily responsible for FV activation via proteolytic cleavages
at positions Arg.sup.709-Ser.sup.710, Arg.sup.1018-Thr.sup.1019 and
Arg.sup.1545-Ser.sup.1546. These cleavages release the B domain and
create a dimeric molecule composed of a 105-kDa heavy chain that
contains the A1 and A2 domains and a 71- to 74-kDa light chain that
contains the A3, C1, and C2 domains. These two chains are held
together by calcium at residues Asp.sup.139 and Asp.sup.140 and
hydrophobic interactions. The heavy chain provides the contacts for
both FXa and prothrombin, whereas the two C domains in the light
chain are needed for the interaction of FVa with the phospholipid
surface. Thus, Factor V is active as a cofactor for FXa of the
thrombinase complex and the activated FXa enzyme requires calcium
and FVa to convert prothrombin to thrombin on the cell surface
membrane. The A3 domain in the light chain is involved in both FXa
and phospholipid interactions. Taken together, the two FVa chains
link FXa to the phospholipid surface formed by the platelet plug at
the site of injury and enable FXa to efficiently bind and cleave
prothrombin to generate thrombin. Factor V is able to bind to
activated platelets. Although FV is predominately found as a
soluble component in blood plasma, a fraction of FV is also present
in the .alpha.-granula of platelets, which is important for normal
hemostasis as evidenced by platelet specific Factor V deficiency
(Janeway et al. (1996) Blood 87: 3571-8).
[0238] One wild type human Factor V sequence is provided in SEQ ID
NO: 155. The term "Factor V polypeptide" herein refers to wild type
Factor V molecules as well as FV variants, FV derivatives and FV
conjugates. Such variants, derivatives and conjugates may exhibit
substantially the same, or improved, biological activity relative
to wild-type human Factor V.
[0239] For the purpose of the current invention, Factor V may be
plasma-derived or recombinantly produced, using well known methods
of production and purification. The degree and location of
glycosylation, gamma-carboxylation and other post-translational
modifications may vary depending on the chosen host cell and its
growth conditions.
[0240] Factor V polypeptides may be tested using commercially
available clotting assays, such as the in vitro Hemoclot Factor V
Reagent assay (Aniara, Ohio, USA: Cat. No. ACK071K).
[0241] In one particular embodiment, the coagulation factor is a
FVIIa polypeptide. Factor VII (FVII) is a glycoprotein primarily
produced in the liver. The mature protein is composed of 406 amino
acid residues and is composed of four domains as defined by
homology. There is an N-terminal Gla domain followed by two
epidermal growth factor (EGF)-like domains and a C-terminal serine
protease domain. FVII circulates in plasma as a single-chain
molecule. Upon activation to activated FVII (FVIIa), the molecule
is cloven between residues Arg152 and Ile153, resulting in a
two-chain protein held together by a disulphide bond. The light
chain contains the Gla and EGF-like domains, whereas the heavy
chain is the protease domain. FVIIa requires binding to its
cell-surface cofactor tissue factor to become fully biologically
active.
[0242] The term "Factor VII(a)" herein encompasses the uncloven
zymogen, Factor VII, as well as the cloven and thus activated
protease, Factor VIIa. "Factor VII(a)" includes natural allelic
variants of FVII(a) that may exist and occur from one individual to
another. One wild type human Factor VIIa sequence is provided in
SEQ ID NO: 157, as well as in Proc Natl Acad Sci USA 1986;
83:2412-2416.
[0243] The term "Factor VII(a) polypeptide" herein refers to wild
type Factor VIIa molecules as well as FVII(a) variants, FVII(a)
derivatives and FVII(a) conjugates. Such variants, derivatives and
conjugates may exhibit substantially the same, or improved,
biological activity relative to wild-type human Factor VIIa.
[0244] The term "FVII(a) variant", as used herein, is intended to
designate Factor FVII having the sequence of SEQ ID NO: 157,
wherein one or more amino acids of the parent protein have been
substituted by another amino acid and/or wherein one or more amino
acids of the parent protein have been deleted and/or wherein one or
more amino acids have been inserted in protein and/or wherein one
or more amino acids have been added to the parent protein. Such
addition can take place either at the N-terminal end or at the
C-terminal end of the parent protein or both. The "analogue" or
"analogues" within this definition still have FVII activity in its
activated form. In one embodiment a variant is at least 90%
identical with the sequence of SEQ ID NO: 157. In another
embodiment a variant is at least 95%, such as at least 96%, such as
at least 97%, such as at least 98%, such as at least 99% identical
with the sequence of SEQ ID NO: 157. As used herein, any reference
to a specific position refers to the corresponding position in SEQ
ID NO: 157.
[0245] Non-limiting examples of FVII(a) variants that have
substantially the same or increased proteolytic activity compared
to recombinant wild type human Factor VII(a) include those
disclosed in WO 01/83725, WO 02/22776, WO 02/077218, WO 03/027147,
WO 03/037932, WO 04/029090, WO 05/024006, WO 07/031,559 and EP
05108713.8, U.S. Pat. No. 7,173,000 B2; and JP4451514 B2.
[0246] The term "improved biological activity" refers to FVII(a)
polypeptides that exhibit i) substantially the same or increased
proteolytic activity compared to recombinant wild type human Factor
VIIa in the presence and/or absence of tissue factor or ii) to
FVII(a) polypeptides with substantially the same or increased TF
affinity compared to recombinant wild type human Factor VIIa or
iii) to FVII(a) polypeptides with substantially the same or
increased half life in plasma compared to recombinant wild type
human Factor VIIa, or iv) to FVII(a) polypeptides with
substantially the same or increased affinity for the activated
platelet. The biological activity of a FVIIa polypeptide may be
measured using a variety of assays known to the person skilled in
the art, such as the in vitro hydrolysis and in vitro proteolysis
assays described in examples 26 and 27.
[0247] For the purpose of the current invention, Factor VII(a) may
be plasma-derived or recombinantly produced, using well known
methods of production and purification. The degree and location of
glycosylation, gamma-carboxylation and other post-translational
modifications may vary depending on the chosen host cell and its
growth conditions.
[0248] Gamma-Carboxylated residues in the FVII sequence below are
represented by ".gamma.".
TABLE-US-00003 SEQ ID NO: 157: Wild type human coagulation Factor
VII
ANAFL.gamma..gamma.LRPGSL.gamma.R.gamma.CK.gamma..gamma.QCSF.gamma..gamma.-
AR.gamma.IFKDA.gamma.RTKLFWISYSDGD
QCASSPCQNGGSCDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGG
CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCKIPILEKNAS
KPQGRIVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCF
KIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIA
LLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGA
TALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSC
KGDSGGPHATHYRGTWYLTGIVSWGQGCAVGHFGVYTRVSQYIEWLQK
LMRSEPRPGVLLRAPFP
[0249] In another particular embodiment, the coagulation factor is
a FVIII polypeptide. Factor VIII (FVIII) is a large, complex
glycoprotein that is primarily produced by hepatocytes. FVIII is
composed of 2351 amino acids, including a signal peptide, and
contains several distinct domains as defined by homology. There are
three A-domains, a unique B-domain, and two C-domains. The domain
order can be listed as NH2-A1-A2-BA3-C1-C2-COOH. FVIII circulates
in plasma as two chains, separated at the B-A3 border. The chains
are connected by bivalent metal ion-bindings. The A1-A2-B chain is
termed the heavy chain (HC) while the A3-C1-C2 is termed the light
chain (LC). Small acidic regions C-terminal of the A1 (the a.sub.1
region) and A2 (the a.sub.2 region) and N-terminal of the A3 domain
(the a.sub.3 region) play important roles in its interaction with
other coagulation proteins, including thrombin and von Willebrand
factor (vWF or VWF), the carrier protein for FVIII, in vivo.
[0250] Endogenous FVIII molecules circulate in vivo as a pool of
molecules with B domains of various sizes, the shortest having
C-terminal at position 740, i.e. at the C-terminal of A2-a.sub.2.
These FVIII molecules with B-domains of different length all have
full procoagulant activity. Upon activation with thrombin, FVIII is
cloven C-terminal of A1-a.sub.1 at position 372, C-terminal of
A2-a.sub.2 at position 740, and between a.sub.3 and A3 at position
1689, the latter cleavage releases the a.sub.3 region, with
concomitant loss of affinity for vWF. The activated FVIII molecule
is termed FVIIIa. Activation allows interaction of FVIIIa with
phospholipid surfaces like activated platelets and activated factor
IX (FIXa): the tenase complex is formed, allowing efficient
activation of factor X (FX).
[0251] The terms "Factor VIII(a)" and "FVIII(a)" include both FVIII
and FVIIIa. "Factor VIII" or "FVIII" herein refers to a human
plasma glycoprotein that is a member of the intrinsic coagulation
pathway and is essential to blood coagulation. "Native FVIII" is
the human FVIII molecule derived from the full length sequence as
shown in SEQ ID NO: 159 (amino acid 1-2332). "FVIII(a)" includes
natural allelic variants of FVIII(a) that may exist and occur from
one individual to another.
[0252] FVIII molecules/variants may be B domain-truncated FVIII
molecules wherein the remaining domains correspond closely to the
sequences as set forth in amino acid numbers 1-740 and 1649-2332 of
SEQ ID NO: 159. In such variants, as well as in FVIII derived from
the full-length sequence, mutations may be introduced in order to,
for example, reduce vWF binding capacity. Amino acid modifications,
such as substitutions and deletions, may be introduced into the
molecule in order to modify the binding capacity of FVIII with
various other components such as LRP, various receptors, other
coagulation factors, cell surfaces, introduction and/or abolishment
of glycosylation sites. Other mutations that do not abolish FVIII
activity may also be accommodated in a FVIII molecule/variant that
may be used for the purposes of the present invention.
[0253] The B domain of FVIII spans amino acids 741-1648 of SEQ ID
NO: 159. The B domain is cloven at several different sites,
generating large heterogeneity in circulating plasma FVIII
molecules. The exact function of the heavily glycosylated B domain
is unknown. What is known is that the B domain is indispensable for
FVIII activity in the coagulation cascade. Recombinant FVIII is
thus frequently produced in the form of B domain-deleted/truncated
variants.
[0254] Endogenous full length FVIII is synthesized as a
single-chain precursor molecule. Prior to secretion, the precursor
is cloven into the heavy chain and the light chain. Recombinant B
domain-deleted FVIII can be produced by means of two different
strategies. Either the heavy chain without the B-domain and the
light chain are synthesized individually as two different
polypeptide chains (two-chain strategy) or the B domain-deleted
FVIII is synthesized as a single precursor polypeptide chain
(single-chain strategy) that is cloven into the heavy and light
chains in the same way as the full-length FVIII precursor.
[0255] In a B domain-deleted FVIII precursor polypeptide, produced
by the single-chain strategy, the heavy and light chain moieties
are often separated by a linker. To minimize the risk of
introducing immunogenic epitopes in the B domain-deleted FVIII, the
sequence of the linker is preferably derived from the FVIII
B-domain. As a minimum, the linker must comprise a recognition site
for the protease that cleaves the B domain-deleted FVIII precursor
polypeptide into the heavy and light chain. In the B domain of full
length FVIII, amino acid 1644-1648 constitutes this recognition
site. The thrombin cleavage site leading to removal of the linker
on activation of B domain-deleted FVIII is located in the heavy
chain. Thus, the size and amino acid sequence of the linker is
unlikely to influence its removal from the remaining FVIII molecule
by thrombin activation. Deletion/truncation of the B domain is an
advantage for production of FVIII. Nevertheless, parts of the B
domain can be included in the linker without reducing the
productivity. The negative effect of the B domain on productivity
has not been attributed to any specific size or sequence of the B
domain.
[0256] FVIII molecules for the present invention are capable of
functioning in the coagulation cascade in a manner that is
functionally similar, or equivalent, to FVIII, inducing the
formation of FXa via interaction with FIXa on an activated platelet
and supporting the formation of a blood clot. FVIII activity can be
assessed in vitro using techniques well known in the art. Clot
analyses, FX activation assays (often termed chromogenic assays),
thrombin generation assays and whole blood thromboelastography are
examples of such in vitro techniques, two of which are described in
examples 28 and 29. FVIII molecules according to the present
invention have FVIII activity that is at least that of native human
FVIII.
[0257] The term "FVIII variant", as used herein, is intended to
designate Factor FVIII having the sequence of SEQ ID NO: 159,
wherein one or more amino acids of the parent protein have been
substituted by another amino acid and/or wherein one or more amino
acids of the parent protein have been deleted and/or wherein one or
more amino acids have been inserted in protein and/or wherein one
or more amino acids have been added to the parent protein. Such
addition can take place either at the N-terminal end or at the
C-terminal end of the parent protein or both. The "analogue" or
"analogues" within this definition still have FVIII activity in its
activated form. In one embodiment a variant is at least 90%
identical with the sequence of SEQ ID NO: 159. In another
embodiment a variant is at least 95%, such as at least 96%, such as
at least 97%, such as at least 98%, such as at least 99% identical
with the sequence of SEQ ID NO: 159. As used herein, any reference
to a specific position refers to the corresponding position in SEQ
ID NO: 159.
[0258] For the purpose of the current invention, FVIII may be
plasma-derived or recombinantly produced, using well known methods
of production and purification. The degree and location of
glycosylation, gamma-carboxylation and other post-translational
modifications may vary depending on the chosen host cell and its
growth conditions.
[0259] In another particular embodiment, the coagulation factor is
a Factor IX polypeptide. Factor IX (FIX) is, in its active form
FIXa, a trypsin-like serine protease that serves a key role in
haemostasis by generating, as part of the tenase complex, most of
the factor Xa required to support proper thrombin formation during
coagulation (reviewed in (Hoffman and Monroe, III 2001)).
[0260] Factor IX (FIX) is a vitamin K-dependent coagulation factor
with structural similarities to factor VII, prothrombin, factor X,
and protein C. The circulating zymogen form is composed of 415
amino acids divided into four distinct domains comprising an
N-terminal .gamma.-carboxyglutamic acid-rich (Gla) domain, two EGF
domains and a C-terminal trypsin-like serine protease domain.
Activation of FIX occurs by limited proteolysis at
Arg.sup.145-Ala.sup.146 and Argso-Val.sup.181 releasing a 35-aa
fragment, the so-called activation peptide (Schmidt and Bajaj
2003). The activation peptide is heavily glycosylated, containing
two N-linked and up to four O-linked glycans.
[0261] "Factor IX" or "FIX", as used herein, refers to a human
plasma Factor IX glycoprotein that is a member of the intrinsic
coagulation pathway and is essential to blood coagulation. "Factor
IX(a)" includes natural allelic variants of FIX(a) that may exist
and occur from one individual to another. Factor IX(a) may be
plasma-derived or recombinantly produced using well known methods
of production and purification. The degree and location of
glycosylation, gamma-carboxylation and other post-translation
modifications may vary depending on the chosen host cell and its
growth conditions. Unless otherwise specified or indicated, Factor
IX means any functional human Factor IX protein molecule in its
normal role in coagulation, including any fragment, analogue and
derivative thereof.
[0262] One example of a "wild type FIX" is the full length human
FIX molecule, as shown in SEQ ID NO: 161.
[0263] The terms "FIX analogue", as used herein, is intended to
designate Factor FIX having the sequence of SEQ ID NO: 161, wherein
one or more amino acids of the parent protein have been substituted
by another amino acid and/or wherein one or more amino acids of the
parent protein have been deleted and/or wherein one or more amino
acids have been inserted in protein and/or wherein one or more
amino acids have been added to the parent protein. Such addition
can take place either at the N-terminal end or at the C-terminal
end of the parent protein or both. The "analogue" or "analogues"
within this definition still have FIX activity in its activated
form. In one embodiment a variant is at least 90% identical with
the sequence of SEQ ID NO: 161. In a further embodiment a variant
is at least 95% identical with the sequence of SEQ ID NO: 161. As
used herein any reference to specific positions refers to the
corresponding position in SEQ ID NO: 161. Non-limiting examples of
FIX(a) variants that have substantially the same activity, FVIII
bypassing activity or increased proteolytic activity compared to
recombinant wild type human Factor IX(a) include those disclosed in
Milanov P, Ivanciu L, Abriss D, Quade-Lyssy P, Miesbach W, Alesci
S, Tonn T, Grez M, Seifried E, Schuttrumpf (2012) J. Blood 119:
602-11 and US 2011/0217284 A1. Unless otherwise specified, Factor
IX domains include the following amino acid residues: Gla domain
being the region from reside Tyrl to residue Lys43; EGF1 being the
region from residue Gln44 to residue Leu84; EGF2 being the region
from residue Asp85 to residue Arg145; the Activation Peptide being
the region from residue Ala146 to residue Arg180; and the Protease
Domain being the region from residue Val181 to Thr414. The light
chain refers to the region encompassing the Gla domain, EGF1 and
EGF2, while the heavy chain refers to the Protease Domain.
[0264] Factor IX may be plasma-derived or recombinantly produced,
using well known methods of production and purification. The degree
and location of glycosylation, gamma-carboxylation and other
post-translational modifications may vary depending on the chosen
host cell and its growth conditions.
[0265] A commercially available assay kit known as `Hyphen BioMed
Chromogenic Factor IX kit (Aniara)` may be used to assess the
activity level of the FIX polypeptide. In this assay, Factor XIa
activates Factor IX into Factor IXa, which together with activated
Factor VIII:C, phospholipids and Ca.sup.2+, activates Factor X into
Factor Xa. The amount of generated Factor Xa was measured at 405 nm
by the amount of pNA released from the Factor Xa specific
chromogenic substrate SXa-11.
[0266] Gamma-Carboxylated residues in the FVII sequence below are
represented by ".gamma.".
TABLE-US-00004 SEQ ID NO: 161: Wild type human coagulation Factor
IX
YNSGKL.gamma..gamma.FVQGNL.gamma.R.gamma.CM.gamma..gamma.KCSF.gamma..gamma-
.AR.gamma.VF.gamma.NT.gamma.RTT.gamma.FWKQYVD
GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELDVTCNIKNGR
CEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVSQTS
KLTRAEAVFPDVDYVNSTEAETILDNITQSTQSFNDFTRVVGGEDAK
PGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGE
HNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLN
SYVTPICIADKEYNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPL
VDRATCLRSTKFTYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSF
LTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKLT
[0267] In another particular embodiment, the coagulation factor is
a FX polypeptide. Coagulation factor X (FX) is a vitamin
K-dependent coagulation factor with structural similarities to
factor VII, prothrombin, factor IX (FIX), and protein C. It is
synthesised with a 40-residue pre-pro-sequence containing a
hydrophobic signal sequence (Aa 1-31) that targets the protein for
secretion. The pro-peptide is important for directing
.gamma.-carboxylation to the light chain of Factor X. The
circulating human FX zymogen is composed of 445 amino acids divided
into four distinct domains comprising an N-terminal
gamma-carboxyglutamic acid rich (Gla) domain, two EGF domains, and
a C-terminal trypsin-like serine protease domain. The mature
two-chain form of FX is composed of a light chain (Aa41-179) and a
heavy chain (Aa183-488) held together by a disulfide bridge
(Cys.sup.172-Cys.sup.342). The light chain contains 11 Gla
residues, which are important for Ca.sup.2+-dependent binding of FX
to negatively charged phospholipid membranes. Wild-type human
coagulation factor X has two N-glycosylation sites (Asn.sup.221 and
Asn.sup.231) and two O-glycosylation sites (Thr.sup.199 and
Thr.sup.211) in the activation peptide. .beta.-hydroxylation occurs
at Asp.sup.103 in the first EGF domain, resulting in
.beta.-hydroxyaspartic acid (Hya). Activation of FX occurs by
limited proteolysis at Arg.sup.234-Ile.sup.235 releasing a 52 amino
acid activation peptide (Aa 183-234). In the extrinsic pathway,
this occurs upon exposure of Tissue factor (TF) on the membrane of
subendothelial cells to plasma and subsequent activation of FVIIa.
Activation via the intrinsic pathway occurs with the interaction of
factor IXa, factor VIIIa, calcium and acidic phospholipid surfaces.
Prothrombin is the most important substrate of Factor Xa, but the
activation requires FXa's co-factor factor Va, calcium and acidic
phospholipid surface. FX deficiency is a rare autosomal recessive
bleeding disorder with an incidence of 1:1,000,000 in the general
population (Dewerchin et al. (2000) Thromb Haemost 83: 185-190).
Although it produces a variable bleeding tendency, patients with a
severe FX deficiency tend to be the most seriously affected among
patients with rare coagulation defects. The prevalence of
heterozygous FX deficiency is about 1:500, but is usually
clinically asymptomatic.
[0268] One example of a "wild type FX" is the full length human FX
molecule, as shown in SEQ ID NO: 163.
[0269] "Factor X polypeptide" herein refers to any functional
Factor X protein molecule capable of activating thrombin, including
fragments, analogues and derivatives of SEQ ID NO: 163.
[0270] The term "FX analogue", as used herein, is intended to
designate Factor FX having the sequence of SEQ ID NO: 163, wherein
one or more amino acids of the parent protein have been substituted
by another amino acid and/or wherein one or more amino acids of the
parent protein have been deleted and/or wherein one or more amino
acids have been inserted in protein and/or wherein one or more
amino acids have been added to the parent protein. Such addition
can take place either at the N-terminal end or at the C-terminal
end of the parent protein or both. The "analogue" or "analogues"
within this definition still have FX activity in its activated
form. In one embodiment a variant is at least 90% identical with
the sequence of SEQ ID NO: 163. In a further embodiment a variant
is at least 95% identical with the sequence of SEQ ID NO: 163. As
used herein any reference to specific positions refers to the
corresponding position in SEQ ID NO: 163.
[0271] FX may be plasma-derived or recombinantly produced, using
well known methods of production and purification. The degree and
location of glycosylation, gamma-carboxylation and other
post-translational modifications may vary depending on the chosen
host cell and its growth conditions.
[0272] In another particular embodiment, the coagulation factor is
a Factor XI polypeptide. Factor XI (FXI) is the zymogen of a blood
coagulation protease, factor XIa (FXIa), which contributes to
hemostasis through activation of factor IX. The factor is produced
by the liver (Emsley et al. (2010) Blood 115:2569-77). The protein
is a 160-kDa disulfide-linked dimer of identical 607 amino acid
subunits, each containing 4 90- or 91-amino acid repeats called
apple domains (from the N-terminus: A1: Aa 20-103, A2: Aa 110-193,
A3: Aa 200-283, A4: Aa 291-374) and a C-terminal trypsin-like
catalytic domain. The protein is expressed with a signal peptide
Aa1-18. The structure is different from those of the
well-characterized vitamin K-dependent coagulation proteases. FXI
circulates in blood as a complex with high molecular weight
kininogen (HK). Prekallikrein (PK), the zymogen of the
protease-kallikrein, is a monomeric homolog of FXI with the same
domain structure that also circulates in complex with HK. The
zymogen factor is activated into factor XIa by Factor XIIa (FXIIa),
thrombin, and is also autocatalytic. Cleavage activation occurs at
the activation loop containing the Arg369-Ile370 cleavage site.
Since FXI deficiency causes relatively mild bleeding, FXI has a
speculative role in early fibrin generation. FXIa is postulated to
be part of a feedback loop that sustains thrombin generation
through FIX activation to consolidate coagulation. Certain tissues
with robust fibrinolytic activity seem important for FXIa activity,
including oropharynx and urinary tract, as these are common sites
of bleeding in FXI-deficient patients. Congenital FXI deficiency is
associated with a mild to moderate bleeding disorder. More than 180
other FXI gene mutations associated with FXI deficiency have been
reported (http://www.factorxi.org, http://www.isth.org), including
more than 100 single amino acid (missense) substitutions. Severe
deficiency is prevalent in people of Jewish ancestry (Seligsohn et
al. (2007) Thromb Haemost. 98:84-89). The carrier rate is
approximately 5% in Ashkenazi Jews, with severe (homozygous)
deficiency found in 1 in 450 persons. As an example, a severe
mutation at Glu117Stop results in a truncated protein and
homozygotes lacks completely plasma FXI antigen.
[0273] Factor XIa activates factor IX by selectively cleaving
Arg.sup.145-Ala.sup.146 and Arg.sup.180-Val.sup.181.
[0274] The term "FXI analogue", as used herein, is intended to
designate Factor XI having the sequence of SEQ ID NO: 165, wherein
one or more amino acids of the parent protein have been substituted
by another amino acid and/or wherein one or more amino acids of the
parent protein have been deleted and/or wherein one or more amino
acids have been inserted in protein and/or wherein one or more
amino acids have been added to the parent protein. Such addition
can take place either at the N-terminal end or at the C-terminal
end of the parent protein or both. The "analogue" or "analogues"
within this definition still have FX activity in its activated
form. In one embodiment a variant is at least 90% identical with
the sequence of SEQ ID NO: 165. In a further embodiment a variant
is at least 95% identical with the sequence of SEQ ID NO: 165. As
used herein any reference to a specific positions refers to the
corresponding position in SEQ ID NO: 165.
[0275] FXI may be plasma-derived or recombinantly produced, using
well known methods of production and purification. The degree and
location of glycosylation, and other post-translational
modifications may vary depending on the chosen host cell and its
growth conditions.
[0276] The term "identity", as known in the art, refers to a
relationship between the sequences of two or more polypeptides, as
determined by comparing the sequences. In the art, "identity" also
means the degree of sequence relatedness between polypeptides, as
determined by the number of matches between strings of two or more
amino acid residues. "Identity" measures the percent of identical
matches between the smaller of two or more sequences with gap
alignments (if any) addressed by a particular mathematical model or
computer program (i.e., "algorithms"). Identity of related
polypeptides can be readily calculated by known methods. Such
methods include, but are not limited to, those described in
Computational Molecular Biology, Lesk, A. M., ed., Oxford
University Press, New York, 1988; Biocomputing: Informatics and
Genome Projects, Smith, D. W., ed., Academic Press, New York, 1993;
Computer Analysis of Sequence Data, Part 1, Griffin, A. M., and
Griffin, H. G., eds., Humana Press, New Jersey, 1994; Sequence
Analysis in Molecular Biology, von Heinje, G., Academic Press,
1987; Sequence Analysis Primer, Gribskov, M. and Devereux, J.,
eds., M. Stockton Press, New York, 1991; and Carillo et al., SIAM
J. Applied Math. 48, 1073 (1988).
[0277] Preferred methods for determining identity are designed to
give the largest match between the sequences tested. Methods of
determining identity are described in publicly available computer
programs. Preferred computer program methods for determining
identity between two sequences include the GCG program package,
including GAP (Devereux et al., Nucl. Acid. Res. 12, 387 (1984);
Genetics Computer Group, University of Wisconsin, Madison, Wis.),
BLASTP, BLASTN, and FASTA (Altschul et al., J. Mol. Biol. 215,
403-410 (1990)). The BLASTX program is publicly available from the
National Center for Biotechnology Information (NCBI) and other
sources (BLAST Manual, Altschul et al. NCB/NLM/NIH Bethesda, Md.
20894; Altschul et al., supra). The well known Smith Waterman
algorithm may also be used to determine identity.
[0278] For example, using the computer algorithm GAP (Genetics
Computer Group, University of Wisconsin, Madison, Wis.), two
polypeptides for which the percent sequence identity is to be
determined are aligned for optimal matching of their respective
amino acids (the "matched span", as determined by the algorithm). A
gap opening penalty (which is calculated as 3 times the average
diagonal; the "average diagonal" is the average of the diagonal of
the comparison matrix being used; the "diagonal" is the score or
number assigned to each perfect amino acid match by the particular
comparison matrix) and a gap extension penalty (which is usually
1/10times the gap opening penalty), as well as a comparison matrix
such as PAM 250 or BLOSUM 62 are used in conjunction with the
algorithm. A standard comparison matrix (see Dayhoff et al., Atlas
of Protein Sequence and Structure, vol. 5, supp.3 (1978) for the
PAM 250 comparison matrix; Henikoff et al., Proc. Natl. Acad. Sci.
USA 89, 10915-10919 (1992) for the BLOSUM 62 comparison matrix) is
also used by the algorithm.
[0279] Preferred parameters for a peptide sequence comparison
include the following: Algorithm: Needleman et al., J. Mol. Biol.
48, 443-453 (1970); Comparison matrix: BLOSUM 62 from Henikoff et
al., PNAS USA 89, 10915-10919 (1992); Gap Penalty: 12, Gap Length
Penalty: 4, Threshold of Similarity: 0.
[0280] The GAP program is useful with the above parameters. The
aforementioned parameters are the default parameters for peptide
comparisons (along with no penalty for end gaps) using the GAP
algorithm.
[0281] Hence, the procoagulant proteins of the current invention
comprise (i) at least one coagulation factor component and (ii) an
antibody or fragment thereof that is capable of binding a receptor,
and/or a fragment thereof, wherein the receptor is present only (in
the non-ubiquitous sense of the word) on the surface of activated
platelets. In one preferred embodiment, said receptor is TLT-1. The
procoagulant proteins of the current invention are preferably
engineered such that their constituent parts may function
independently of one another. For example, said coagulation factor
component of the current invention is capable of upregulating blood
coagulation. Likewise, said "antibody" component of the invention
is preferably able to bind a receptor such as TLT-1, unhindered by
the presence of said coagulation factor component. The carboxy
terminus of the coagulation factor component may be covalently
attached to the amino terminus of the antibody component of the
construct, or vice versa. Said antibody component of the construct
will preferably not bind to or demonstrate little affinity for any
other triggering receptor expressed on myeloid cells (TREM). The
construct of the current invention may or may not comprise a linker
between said coagulation factor and said antibody constituents.
Said optional linker may be any one of the linkers described in
Table 3, or may be any other linker that binds both coagulation
factor and antibody constituent parts of the construct, such that
both are functional. In one embodiment, the coagulation factor and
anti-TLT-1 components are expressed as fusion proteins. In one
embodiment, the coagulation factor and anti-TLT-1 components are
chemically conjugated.
[0282] Procoagulant proteins wherein part (ii) is a mAb may
comprise two coagulation factor polypeptides (part (i)). The
coagulation factor may be fused to a HC of the mAb; The coagulation
factor may be fused to a LC of the mAb. The coagulation factor may
be fused to a antibody, or fragment thereof, which, in turn, is
fused to a HC of the mAb or a LC of the mAb.
[0283] Thus, a procoagulant protein of the present invention may
comprise (i) at least one FV polypeptide and (ii) an antibody, or
fragment thereof, that is capable of binding TLT-1.
[0284] A procoagulant protein of the present invention may comprise
(i) at least one FVII polypeptide and (ii) an antibody, or fragment
thereof, that is capable of binding TLT-1.
[0285] A procoagulant protein of the present invention may comprise
(i) at least one FVIII polypeptide and (ii) an antibody, or
fragment thereof, that is capable of binding TLT-1.
[0286] A procoagulant protein of the present invention may comprise
(i) at least one FIX polypeptide and (ii) an antibody, or fragment
thereof, that is capable of binding TLT-1.
[0287] A procoagulant protein of the present invention may comprise
(i) at least one FX polypeptide and (ii) an antibody, or fragment
thereof, that is capable of binding TLT-1.
[0288] A procoagulant protein of the present invention may comprise
(i) at least one FXI polypeptide and (ii) an antibody, or fragment
thereof, that is capable of binding TLT-1.
[0289] Procoagulant proteins may further comprise a linker.
Non-limiting examples of linker amino acid sequences, which may be
utilised when the procoagulant proteins are manufactured as fusion
proteins, are shown in Table 3. Hence, said linker may be L1. The
linker may be L2. The linker may be L3. The linker may be L4. The
linker may be L5. The linker may be L6. The linker may be L7. The
linker may be L8. The linker may be L9. The linker may be L10.
TABLE-US-00005 TABLE 3 Non-limiting examples of optional linkers
Linker Length ID (AA) Linker sequence L0 0 no linker L1 2 GS L2 7
GSGGGGS L3 12 GSGGGGSGGGGS L4a 17 GSGGGGSGGGGSGGGGS L4b 17
GGGGSGGGGSGGGGSGS L5 22 GGGGSGSGGGGSGGGGSGGGGS L6 27
GGGGSGGGGSGSGGGGSGGGGSGGGGS L7 32 GGGGSGGGGSGGGGSGSGGGGSGGGGSGGGGS
L8 37 GGGGSGGGGSGGGGSGGGGSGSGGGGSGGGGSGGG GS L9 42
GGGGSGGGGSGGGGSGGGGSGGGGSGSGGGGSGGG GSGGGGS L10 16
YGPPSPSSPAPEFLGG
[0290] As mentioned above, the extracellular part of TLT-1 is
composed of an immunoglobulin-like domain and a stalk. Procoagulant
proteins of the invention may be capable of binding to either of
these. When part (ii) of the procoagulant protein is capable of
binding the immunoglobulin-like domain, a longer linker may allow
part (i) of said fusion protein to adapt a functionally relevant
position and orientation on the surface of the activated platelet,
thereby facilitating its function.
[0291] A procoagulant protein that is capable of binding the stalk
of TLT-1 is adjacent to the platelet membrane. A procoagulant
protein that is capable of binding the stalk may comprise a linker
but the inclusion of a linker does not necessarily affect the
function of the coagulation factor part of the fusion protein.
[0292] As described above, procoagulant proteins of the invention
are capable of binding a receptor that is present on platelets that
are undergoing activation or that are fully activated, such as
TLT-1. The term "binding affinity" is intended to refer to the
property of procoagulant proteins, or the antibody component of
procoagulant proteins, to bind or not to bind to their target.
Binding affinity may be quantified by determining the binding
constant (K.sub.D) for an antibody component and its target.
Similarly, the specificity of binding of an antibody component to
its target may be defined in terms of the comparative binding
constants (K.sub.D) of the antibody for its target as compared to
the binding constant with respect to the antibody and another,
non-target molecule.
[0293] Typically, the K.sub.D for the antibody with respect to the
target will be 2-fold, preferably 5-fold, more preferably 10-fold
less than K.sub.D with respect to the other, non-target molecule
such as unrelated material or accompanying material in the
environment. More preferably, the K.sub.D will be 50-fold less,
even more preferably 100-fold less, and yet more preferably
200-fold less.
[0294] The value of this binding constant can be determined
directly by well-known methods, and can be computed even for
complex mixtures by methods such as those, for example, set forth
in Caceci et al. (Byte 9:340-362, 1984). For example, the K.sub.D
may be established using a double-filter nitrocellulose filter
binding assay such as that disclosed by Wong & Lohman (Proc.
Natl. Acad. Sci. USA 90, 5428-5432, 1993). Other standard assays to
evaluate the binding ability of antibodies towards targets are
known in the art, including for example, ELISAs, Western blots,
RIAs, and flow cytometry analysis. The binding kinetics (e.g.,
association rate and dissociation rate constants) and binding
affinity of the antibody can also be assessed by standard assays
known in the art, such as by surface plasmon resonce (SPR)
analysis.
[0295] A competitive binding assay can be conducted in which the
binding of the antibody to the target is compared to the binding of
the target by another, known ligand of that target, or another
antibody.
[0296] K.sub.D values for the antibody, or fragment thereof, of the
invention may also be at least 1.times.10.sup.-15M, such as at
least 1.times.10.sup.-14M, such as at least 1.times.10.sup.-13M,
such as at least 1.times.10.sup.-12M, such as at least
1.times.10.sup.-11 M, such as at least 1.times.10.sup.-10M, such as
approximately 3.times.10.sup.-9M, such as at least
1.times.10.sup.-9M, or at least 1.times.10.sup.-8M. An antibody of
the invention may have a Kd (or Ki) for its target of
1.times.10.sup.-7M or less, 1.times.10.sup.-8M or less or
1.times.10.sup.-9M or less.
[0297] Preferred K.sub.D values for the antibody, or fragment
thereof, may be 1.times.10.sup.-15 M to 1.times.10.sup.-14 M, such
as 1.times.10.sup.-14 M to 1.times.10.sup.-13M 1.times.10.sup.-13M
to 1.times.10.sup.-12M, such as 1.times.10.sup.-12M to
1.times.10.sup.-11 M, such as 1.times.10.sup.-11 M to
1.times.10.sup.-10M, such as 1.times.10.sup.-10M to
1.times.10.sup.-9M such as approximately 3.times.10.sup.-9M, such
as 1.times.10.sup.-9M to 2.times.10.sup.-8M.
[0298] An antibody or fragment thereof that specifically binds its
target may bind its target with a high affinity, such as a K.sub.D
as discussed above, and may bind to other, non-target molecules
with a lower affinity. For example, the antibody may bind to a
non-target molecules with a K.sub.D of 1.times.10.sup.-6M or more,
more preferably 1.times.10.sup.-5 M or more, more preferably
1.times.10.sup.-4 M or more, more preferably 1.times.10.sup.-3 M or
more, even more preferably 1.times.10.sup.-2 M or more. A
procoagulant protein of the invention is preferably capable of
binding to its target with an affinity that is at least two-fold,
10-fold, 50-fold, 100-fold, 200-fold, 500-fold, 1.000-fold or
10.000-fold or greater than its affinity for binding to another
non-target molecule, such as other TREMs than TLT-1.
[0299] The functional effects of the invented procoagulant proteins
may be assessed by means of various in vitro and in vivo
experiments. In vitro experiments may be designed to assess the
function of the fusion proteins as a whole, as well as their
component (i) coagulation factor and (ii) antibody parts. In vivo,
fusion proteins may be tested in a tail-bleeding model in
haemophilic mice that are transfused with human platelets.
Furthermore in vivo, fusion proteins may be tested in a
tail-bleeding model in haemophilic mice with the human TLT-1 gene
inserted ("humanized" with respect to TLT-1).
[0300] As mentioned above, the procoagulant proteins may be
provided in the form of fusion proteins or chemical conjugates. In
the former case, the invention also relates to polynucleotides that
encode the procoagulant proteins of the invention. Thus, a
polynucleotide of the invention may encode any procoagulant protein
as described herein. The terms "nucleic acid molecule" and
"polynucleotide" are used interchangeably herein and refer to a
polymeric form of nucleotides of any length, either
deoxyribonucleotides or ribonucleotides, or analogs thereof.
Non-limiting examples of polynucleotides include a gene, a gene
fragment, messenger RNA (mRNA), cDNA, recombinant polynucleotides,
plasmids, vectors, isolated DNA of any sequence, isolated RNA of
any sequence, nucleic acid probes, and primers. A polynucleotide of
the invention may be provided in isolated or purified form.
[0301] A nucleic acid sequence which "encodes" a selected
polypeptide is a nucleic acid molecule which is transcribed (in the
case of DNA) and translated (in the case of mRNA) into a
polypeptide in vivo, when placed under the control of appropriate
regulatory sequences. The boundaries of the coding sequence are
determined by a start codon at the 5' (amino) terminus and a
translation stop codon at the 3' (carboxy) terminus. For the
purposes of the invention, such nucleic acid sequences can include,
but are not limited to, cDNA from viral, prokaryotic or eukaryotic
mRNA, genomic sequences from viral or prokaryotic DNA or RNA, and
even synthetic DNA sequences. A transcription termination sequence
may be located 3' to the coding sequence.
[0302] Polynucleotides of the invention can be synthesised
according to methods well known in the art, as described by way of
example in Sambrook et al. (1989, Molecular Cloning--a laboratory
manual; Cold Spring Harbor Press).
[0303] The nucleic acid molecules of the present invention may be
provided in the form of an expression cassette which includes
control sequences operably linked to the inserted sequence, thus
allowing for expression of the antibody of the invention in vivo.
These expression cassettes, in turn, are typically provided within
vectors (e.g., plasmids or recombinant viral vectors). Such an
expression cassette may be administered directly to a host subject.
Alternatively, a vector comprising a polynucleotide of the
invention may be administered to a host subject. Preferably the
polynucleotide is prepared and/or administered using a genetic
vector. A suitable vector may be any vector which is capable of
carrying a sufficient amount of genetic information, and allowing
expression of a polypeptide of the invention.
[0304] The present invention thus includes expression vectors that
comprise such polynucleotide sequences. Such expression vectors are
routinely constructed in the art of molecular biology and may for
example involve the use of plasmid DNA and appropriate initiators,
promoters, enhancers and other elements, such as for example
polyadenylation signals which may be necessary, and which are
positioned in the correct orientation, in order to allow for
expression of a peptide of the invention. Other suitable vectors
would be apparent to persons skilled in the art. By way of further
example in this regard we refer to Sambrook et al.
[0305] The invention also includes isolated cells that have been
modified to express fusion proteins according to the invention.
Such cells include transient, or--preferably--stable higher
eukaryotic cell lines, such as mammalian cells or insect cells;
lower eukaryotic cells, such as yeast; or prokaryotic cells such as
bacterial cells. Particular examples of cells which may be modified
by insertion of vectors or expression cassettes encoding for a
construct of the invention include mammalian HEK293T, CHO, HeLa and
COS cells. Preferably the cell line selected will be one which is
not only stable, but also allows for mature glycosylation and cell
surface expression of a polypeptide.
[0306] Such cell lines of the invention may be cultured using
routine methods to produce a fusion protein or construct according
to the invention. Alternatively, polynucleotides, expression
cassettes or vectors of the invention may be administered to a cell
from a subject ex vivo and the cell then returned to the body of
the subject.
[0307] Alternatively, procoagulant proteins may be obtained by
chemical conjugation of the antibody (such as a mAb), or fragment
thereof, and the coagulation factor. In this case, a linker between
the two proteins may contain one or more chemical moieties which
are not present in those amino acids that are encoded by DNA.
[0308] In one embodiment, a chemical moiety used in the linker
comprises the biradical with the structure
##STR00001##
wherein * shows the positions of connection of this biradical.
[0309] The term "biradical" refers to an even-electron chemical
compound with two free radical centres which act independently of
one another.
[0310] In another embodiment, a chemical moiety used in the linker
comprises a polymer: a macromolecule composed of repeating
structural units that are typically connected by covalent chemical
bonds. Such a polymer may be hydrophilic.
[0311] The term hydrophilic or "water-soluble" refers to moieties
that have some detectable degree of solubility in water. Methods to
detect and/or quantify water solubility are well known in the
art.
[0312] Exemplary water-soluble polymers according to the invention
include peptides, saccharides, (poly)ethers, (poly)amines,
(poly)carboxylic acids and the like. Peptides can have mixed
sequences and be composed of a single amino acid, e.g.,
(poly)lysine. An exemplary polysaccharide is (poly)sialic acid. An
exemplary (poly)ether is (poly)ethylene glycol. (Poly)ethylene
imine is an exemplary polyamine, and (poly)acrylic acid is a
representative (poly)carboxylic acid.
[0313] The hydrophilic polymer according to the present invention
is, preferably, non-naturally occurring. In one example, the
non-naturally occurring modifying group is a polymeric modifying
group, in which at least one polymeric moiety is non-naturally
occurring. In another example, the non-naturally occurring
modifying group is a modified carbohydrate. The locus of
functionalization with the modifying group is selected such that it
does not prevent the "modified sugar" from being added
enzymatically to a polypeptide. "Modified sugar" also refers to any
glycosyl mimetic moiety that is functionalized with a modifying
group and which is a substrate for a natural or modified enzyme,
such as a glycosyltransferase.
[0314] Many other polymers are also suitable for the invention.
Polymer backbones that are non-peptidic and water-soluble, are
particularly useful in the invention. Examples of suitable polymers
include, but are not limited to, other poly(alkylene glycols), such
as poly(propylene glycol) ("PPG"), copolymers of ethylene glycol
and propylene glycol and the like, poly(oxyethylated polyol),
poly(olefinic alcohol), poly(vinylpyrrolidone),
poly(hydroxypropylmethacrylamide), poly([alpha]-hydroxy acid),
poly(vinyl alcohol), polyphosphazene, polyoxazoline,
poly(N-acryloylmorpholine), such as described in U.S. Pat. No.
5,629,384, which is incorporated by reference herein in its
entirety, as well as copolymers, terpolymers, and mixtures
thereof.
[0315] The polymeric linker may alter a property of the
procoagulant protein, such as its bioavailability, biological
activity or its half-life in the body.
[0316] The polymeric linker is, preferably, linear.
[0317] Although the molecular weight of each individual polymer
chain may vary, it is typically in the range of from about 1,000 Da
(1 kDa) to about 40,000 Da (40 kDa), such as about 1,000 Da to
about 12,000 Da such as about 2,000 Da to about 11,000 Da, such as
about 2,000 Da to about 3,000 Da; about 3,000 Da to about 4,000 Da;
about 4,000 to about 5,000 Da; about 5,000 to about 6,000 Da; about
6,000 to about 7,000 Da; about 7,000 to about 8,000 Da; about 8,000
to about 9,000 Da; about 9,000 to about 10,000 Da; or about 10,000
to about 11,000 Da. It should be understood that these sizes
represent estimates rather than exact measures. According to a
preferred embodiment, the molecules according to the invention are
conjugated with a heterogenous population of hydrophilic
polymers.
[0318] In a particular embodiment, a chemical moiety used in the
linker comprises polyethylene glycol (PEG).
[0319] The term "PEG" herein refers to a biradical comprising the
structure
##STR00002##
wherein n' is an integer larger than 1.
[0320] PEG is prepared by polymerization of ethylene oxide and is
commercially available over a wide range of molecular weights. The
PEG for use according to the present invention is, preferably,
linear.
[0321] Furthermore, "PEG" may refer to a polyethylene glycol
compound, or derivative thereof, with or without coupling agents,
coupling or activating moieties (e.g., with carboxylic acid/active
ester, keto, alkoxyamine, thiol, triflate, tresylate, aziridine,
oxirane, alkyne, azide or a maleimide moiety).
[0322] In one particular embodiment the PEG for use according to
the invention is monodisperse. In another particular embodiment,
the PEG for use according to the invention is polydisperse.
[0323] Polydisperse PEG is composed of PEG molecules that have
various molecular weights. The size distribution can be
characterized statistically by its weight average molecular weight
(Mw) and its number average molecular weight (Mn), the ratio of
which is called the polydispersity index (Mw/Mn) (see e.g. "Polymer
Synthesis and Characterization", J. A. Nairn, University of Utah,
2003). Mw and Mn can be measured by mass spectroscopy.
[0324] The polydispersity index may be a number that is greater
than or equal to one and it may be estimated from Gel Permeation
Chromatographic data. When the polydispersity index is 1, the
product is monodisperse and is thus made up of compounds with a
single molecular weight. When the polydispersity index is greater
than 1 the polymer is polydisperse, and the polydispersity index
tells how broad the distribution of polymers with different
molecular weights is. The polydispersity index typically increases
with the molecular weight of the PEG. In particular embodiments,
the polydispersity index of the PEG for use according to the
invention is i) below 1.06, ii) below 1.05, iii) below 1.04, iv)
below 1.03 or v) between 1.02 and 1.03.
[0325] Different forms of PEG are available, depending on the
initiator used for the polymerization process.
[0326] Numerous methods for conjugation of PEG substituents are
described in Advanced Drug Delivery Reviews, 2002, 54, 459-476,
Nature Reviews Drug Discovery, 2003, 2, 214-221
DOI:10.1038/nrd1033, Adv Polym Sci, 2006, 192, 95-134, DOI
10.1007/12.sub.--022, Springer-Verlag, Berlin Heidelberg, 2005, and
references therein. Alternatively, conjugation of the hydrophilic
polymer substituent could take place by use of enzymatic methods.
Such methods are for instance use of glycosyltransferases as
described in WO2003/031464 or use of transglutaminases as described
in WO2006134148.
[0327] To effect covalent attachment of the polymer molecule(s) to
the polypeptide, the hydroxyl end groups of the polymer molecule
are provided in activated form, i.e. with reactive functional
groups. Suitable activated polymer molecules are commercially
available, e.g. from Sigma-Aldrich Corporation, St. Louis, Mo.,
USA, Rapp Polymere GmbH, Tubingen, Germany, or from PolyMASC
Pharmaceuticals plc, UK. Alternatively, the polymer molecules can
be activated by conventional methods known in the art, e.g. as
disclosed in WO 90/13540. Specific examples of activated PEG
polymers are disclosed in U.S. Pat. No. 5,932,462 and U.S. Pat. No.
5,643,575. Furthermore, the following publications disclose useful
polymer molecules and/or PEGylation chemistries: WO2003/031464,
WO2004/099231.
[0328] The conjugation of the monoclonal antibody, fragment thereof
or coagulation factor with the activated polymer molecules may be
conducted by use of any conventional method, e.g. as described in
the following references (which also describe suitable methods for
activation of polymer molecules): R. F. Taylor, (1991), "Protein
immobilisation. Fundamental and applications", Marcel Dekker, N.Y.;
S. S. Wong, (1992), "Chemistry of Protein Conjugation and
Crosslinking", CRC Press, Boca Raton; G. T. Hermanson et al.,
(1993), "Immobilized Affinity Ligand Techniques", Academic Press,
N.Y., `Bioconjugate Techniques, Second Edition, Greg T. Hermanson,
2008, Amsterdam, Elsevier). The skilled person will be aware that
the activation method and/or conjugation chemistry to be used
depends on the attachment group(s) of the polypeptide (examples of
which are given further above), as well as the functional groups of
the polymer (e.g. being amine, hydroxyl, carboxyl, aldehyde,
sulfhydryl, succinimidyl, maleimide, vinylsulfone or haloacetate).
The PEGylation may be directed towards conjugation to all available
attachment groups on the polypeptide (i.e. such attachment groups
that are exposed at the surface of the polypeptide) or may be
directed towards one or more specific attachment groups, e.g. the
N-terminal amino group. Furthermore, the conjugation may be
achieved in one step or in a stepwise manner.
[0329] In another embodiment, a chemical moiety used as the linker
is hydroxyethyl starch. The term "hydroxyethyl starch" (HES/HAES),
as used herein, refers to a nonionic starch derivative. Different
types of hydroxyethyl starches are typically described by their
average molecular weight, typically around 130 to 200 kDa.
[0330] In another embodiment, a chemical moiety used in the linker
comprises polysialic acid.
[0331] In another embodiment, a chemical moiety used in the linker
is attached to at least one of the proteins to a glycan: a
polysaccharide or an oligosaccharide that is attached to a
protein.
[0332] In another embodiment, a chemical moiety used in the linker
is attached to at least one of the proteins to an O-linked
glycan.
[0333] In another embodiment, a chemical moiety used in the linker
is attached to at least one of the proteins to an N-linked
glycan.
[0334] Both N-glycans and O-glycans are attached to proteins such
as mAbs and coagulation factors by the cells producing these
proteins. The cellular N-glycosylation machinery recognizes and
glycosylates N-glycosylation signals (N-X-S/T motifs) in the amino
acid chain, as the nascent protein is translocated from the
ribosome to the endoplasmic reticulum (Kiely et al. 1976; Glabe et
al. 1980). Likewise, O-glycans are attached to specific
O-glycosylation sites in the amino acid chain, but the motifs
triggering O-glycosylation are much more heterogenous than the
N-glycosylation signals, and our ability to predict O-glycosylation
sites in amino acid sequences is still inadequate (Julenius et al.
2004). Methods of conjugating polypeptides with various polymeric
side groups are described e.g. in WO0331464.
[0335] In another embodiment, a chemical moiety used in the linker
comprises a chemical moiety, which is used to attach said linker to
at least one of the proteins with a structure selected of the
biradicals:
##STR00003##
[0336] In one embodiment, the linker comprises the biradical
structure of
##STR00004##
wherein * shows the positions of connection of this biradical.
[0337] In another embodiment, the linker comprises the
structure
##STR00005##
wherein * shows the positions of connection of this biradical.
[0338] A compound of the general formula
##STR00006##
[0339] wherein "anti-TLT-1 mAb (fragment)" may be a full size mAb
against TLT-1 or a fragment or an analogue intellectually derived
thereof such as but not limited to, a FAB-fragment or a sc-FAB with
none, one or more point mutations, the linker may be a water
soluble polymer such as but not limited to e.g. PEG, polysialic
acid, or hydroxyethyl starch, and protein is any protein which is
thought to has one or more improved properties when attached to
anti-TLT-1 mAb (fragment) may be for example prepared in a two step
procedure.
[0340] During the first step, a linker, with two different reactive
groups RS1 and RS2 may be attached to the anti-TLT-1 mAb
(fragment). The reaction may be run with low site selectivity or in
a selective way, such that RS1 only reacts at one or few position
of the anti TLT-1 mAb (fragment). As a non-exclusive example, RS1
could be an aldehyde and react by reductive amination only with
N-termini of the anti TLT-1 mAb (fragment) by reductive amination,
known to a person trained in the art. Another non-exclusive example
RS1 could be a maleimide group, which may react with a free thiol
on the anti TLT-1 mAb (fragment).
##STR00007##
[0341] During the second step, the reactive group RS2 may be
reacted with low site selectivity or site selectivity with a FVIIa
molecule. As a non-exclusive example, a site selective reaction at
FVIIa may be obtained when RS2 is a sialic acid derivative, which
can react in the presence of a suitable enzyme such as but not
limited to ST3Gal-III with N-linked glycans, which do not end
exclusively with sialic acids.
##STR00008##
[0342] The order of attachment of the linker to the two proteins,
namely the anti-TLT-1 mAb (fragment) and the protein may be
switched, thereby attaching the RS1-Linker-RS2 molecule first to
the protein molecule and then to the anti TLT-1 mAb (fragment).
[0343] In another aspect, the present invention provides
compositions and formulations comprising molecules of the
invention, such as the fusion proteins, polynucleotides, vectors
and cells described herein. For example, the invention provides a
pharmaceutical composition that comprises one or more fusion
proteins of the invention, formulated together with a
pharmaceutically acceptable carrier.
[0344] Accordingly, one object of the invention is to provide a
pharmaceutical formulation comprising such an antibody which is
present in a concentration from 0.25 mg/ml to 250 mg/ml, and
wherein said formulation has a pH from 2.0 to 10.0. The formulation
may further comprise a buffer system, preservative(s), tonicity
agent(s), chelating agent(s), stabilizers and surfactants. The use
of preservatives, isotonic agents, chelating agents, stabilizers
and surfactants in pharmaceutical compositions is well-known to the
skilled person. Reference may be made to Remington: The Science and
Practice of Pharmacy, 19.sup.th edition, 1995.
[0345] In one embodiment, the pharmaceutical formulation is an
aqueous formulation. Such a formulation is typically a solution or
a suspension. The terms "aqueous formulation" is defined as a
formulation comprising at least 50% w/w water. Likewise, the term
"aqueous solution" is defined as a solution comprising at least 50%
w/w water, and the term "aqueous suspension" is defined as a
suspension comprising at least 50% w/w water.
[0346] In another embodiment, the pharmaceutical formulation is a
freeze-dried formulation, to which the physician or the patient
adds solvents and/or diluents prior to use.
[0347] In a further aspect, the pharmaceutical formulation
comprises an aqueous solution of such an antibody, and a buffer,
wherein the antibody is present in a concentration from 1 mg/ml or
above, and wherein said formulation has a pH from about 2.0 to
about 10.0.
[0348] The term "treatment", as used herein, refers to the medical
therapy of any human or other animal subject in need thereof. Said
subject is expected to have undergone physical examination by a
medical practitioner, who has given a tentative or definitive
diagnosis which would indicate that the use of said specific
treatment is beneficial to the health of said human or other animal
subject. The timing and purpose of said treatment may vary from one
individual to another, according to the status quo of the subject's
health. Preventative or prophylactic administration of antibodies
of the invention is also contemplated, with prevention being
defined as delaying or averting manifestation aggravation of one or
more symptoms of a disease or disorder. Thus, said treatment may be
prophylactic, palliative, symptomatic and/or curative.
[0349] In terms of the present invention, prophylactic, palliative,
symptomatic and/or curative treatments may represent separate
aspects of the invention.
[0350] A coagulopathy that results in an increased haemorrhagic
tendency may be caused by any qualitative or quantitative
deficiency of any pro-coagulative component of the normal
coagulation cascade or any upregulation of fibrinolysis. Such
coagulopathies may be congenital and/or acquired and/or iatrogenic
and are identified by a person skilled in the art.
[0351] Non-limiting examples of congenital hypocoagulopathies are
haemophilia A, haemophilia B, Factor VII deficiency, Factor X
deficiency, Factor XI deficiency, von Willebrand's disease and
thrombocytopenias such as Glanzmann's thombasthenia and
Bernard-Soulier syndrome.
[0352] A non-limiting example of an acquired coagulopathy is serine
protease deficiency caused by vitamin K deficiency; such vitamin
K-deficiency may be caused by administration of a vitamin K
antagonist, such as warfarin. Acquired coagulopathy may also occur
following extensive trauma. In this case otherwise known as the
"bloody vicious cycle", it is characterised by haemodilution
(dilutional thrombocytopaenia and dilution of clotting factors),
hypothermia, consumption of clotting factors and metabolic
derangements (acidosis). Fluid therapy and increased fibrinolysis
may exaserbate this situation. Said haemorrhage may be from any
part of the body.
[0353] Haemophilia A with "inhibitors" (that is, allo-antibodies
against factor VIII) and haemophilia B with "inhibitors" (that is,
allo-antibodies against factor IX) are non-limiting examples of
coagulopathies that are partly congenital and partly acquired. A
non-limiting example of an iatrogenic coagulopathy is an overdosage
of anticoagulant medication--such as heparin, aspirin, warfarin and
other platelet aggregation inhibitors--that may be prescribed to
treat thromboembolic disease. A second, non-limiting example of
iatrogenic coagulopathy is that which is induced by excessive
and/or inappropriate fluid therapy, such as that which may be
induced by a blood transfusion.
[0354] In one embodiment of the current invention, haemorrhage is
associated with haemophilia A or B. In another embodiment,
haemorrhage is associated with haemophilia A or B with acquired
inhibitors. In another embodiment, haemorrhage is associated with
von Willebrand's disease. In another embodiment, haemorrhage is
associated with severe tissue damage. In another embodiment,
haemorrhage is associated with severe trauma. In another
embodiment, haemorrhage is associated with surgery. In another
embodiment, haemorrhage is associated with haemorrhagic gastritis
and/or enteritis. In another embodiment, the haemorrhage is profuse
uterine bleeding, such as in placental abruption. In another
embodiment, haemorrhage occurs in organs with a limited possibility
for mechanical haemostasis, such as intracranially, intraaurally or
intraocularly. In another embodiment, haemorrhage is associated
with anticoagulant therapy.
[0355] In a further embodiment, haemorrhage may be associated with
thrombocytopaenia. In individuals with thrombocytopaenia,
constructs of the current invention may be co-administered with
platelets.
[0356] The following is a non-limiting list of embodiments of the
present invention:
[0357] Embodiment 1: A procoagulant protein comprising (i) at least
one coagulation factor, covalently attached to (ii) an antibody, or
fragment thereof, that is capable of binding (iii) TLT-1, and/or a
fragment or variant thereof.
[0358] Embodiment 2: The procoagulant protein according to
embodiment 1, wherein (iii) is TLT-1, or a fragment or variant
thereof.
[0359] Embodiment 3: The procoagulant protein according to
embodiment 2, wherein (iii) is TLT-1 (16-162).
[0360] Embodiment 4: The procoagulant protein according to
embodiment 2, wherein (iii) is TLT-1 (20-125).
[0361] Embodiment 5: The procoagulant protein according to
embodiment 2, wherein (iii) is TLT-1 (126-162).
[0362] Embodiment 6: The procoagulant protein according to any one
of embodiments 1-2, wherein (i) is a serine protease or a
derivative thereof.
[0363] Embodiment 7: The procoagulant protein according to
embodiment 3, wherein (i) is a Factor VII polypeptide.
[0364] Embodiment 8: The procoagulant protein according to
embodiment 3, wherein (i) is a Factor IX polypeptide.
[0365] Embodiment 9: The procoagulant protein according to
embodiment 3, wherein (i) is a Factor X polypeptide.
[0366] Embodiment 10: The procoagulant protein according to any one
of embodiments 1-2, wherein (i) is a Factor V polypeptide.
[0367] Embodiment 11: The procoagulant protein according to any one
of embodiments 1-2, wherein (i) is a Factor VIII polypeptide.
[0368] Embodiment 12: The procoagulant protein according to any one
of embodiments 1-2, wherein (i) is a Factor XI polypeptide.
[0369] Embodiment 13: The procoagulant protein according to any one
of embodiments 1-6, wherein (ii) is a monoclonal antibody or a
fragment thereof.
[0370] Embodiment 14: The procoagulant protein according to
embodiment 10, wherein (ii) is a Fab fragment, a F(ab').sub.2
fragment, a Fab' fragment, a Fd fragment, a Fv fragment, a ScFv
fragment, a dAb fragment or an isolated complementarity determining
region (CDR).
[0371] Embodiment 15: The procoagulant protein according embodiment
11, wherein (ii) is a Fab fragment.
[0372] Embodiment 16: The procoagulant protein according to any one
of embodiments 13-15, wherein the epitope of (ii) comprises one or
more residues selected from the group consisting of V17, Q18, C19,
H20, Y21, R22, L23, Q24, D25, V26, K27, A28, L63, G64, G65, G66,
L67, L68, G89, A90, R91, G92, P93, Q94, I95 and L96 of SEQ ID NO:
5.
[0373] Embodiment 17: The procoagulant protein according to any one
of embodiments 13-15, wherein (ii) is an antibody, or a fragment
thereof, which is capable of binding to the same epitope as
mAb0023.
[0374] Embodiment 18: A procoagulant protein according to any of
embodiments 16-17, wherein the heavy chain of (ii) comprises:
[0375] a CDR1 sequence of amino acids 50 to 54 (DYFMY) of SEQ ID
NO: 34, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0376] a CDR2 sequence of amino acids
69 to 85 (YISNGGDSSSYPDTVKG) of SEQ ID NO: 34, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0377] a CDR3 sequence of amino acids
118 to 129 (NKNWDDYYDMDY) of SEQ ID NO: 34, wherein one, two or
three of these amino acids may be substituted by a different amino
acid.
[0378] Embodiment 19: A procoagulant protein according to any of
embodiments 16-18, wherein the light chain of (ii) comprises:
[0379] a CDR1 sequence of amino acids 44 to 60 (KSSQSLLNSRTRKNYLA)
of SEQ ID NO: 35, wherein one, two, three or four of these amino
acids may be substituted with a different amino acid; and/or [0380]
a CDR2 sequence of amino acids 76 to 82 (WASTRES) of SEQ ID NO: 35,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0381] a CDR3 sequence of amino acids
115 to 122 (KQSYNLLT) of SEQ ID NO: 35, wherein one or two of these
amino acids may be substituted with a different amino acid.
[0382] Embodiment 20: A procoagulant protein according to any of
embodiments 16-17, wherein the heavy chain of (ii) comprises:
[0383] a CDR1 sequence of amino acids 50 to 54 (DYFMY) of SEQ ID
NO: 34, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0384] a CDR2 sequence of amino acids
69 to 85 (YISNGGDSSSYPDTVKG) of SEQ ID NO: 34, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0385] a CDR3 sequence of amino acids
118 to 129 (NKNWDDYYDMDY) of SEQ ID NO: 34, wherein one, two or
three of these amino acids may be substituted by a different amino
acid. [0386] and wherein the light chain of (ii) comprises: [0387]
a CDR1 sequence of amino acids 44 to 60 (KSSQSLLNSRTRKNYLA) of SEQ
ID NO: 35, wherein one, two, three or four of these amino acids may
be substituted with a different amino acid; and/or [0388] a CDR2
sequence of amino acids 76 to 82 (WASTRES) of SEQ ID NO: 35,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0389] a CDR3 sequence of amino acids
115 to 122 (KQSYNLLT) of SEQ ID NO: 35, wherein one or two of these
amino acids may be substituted with a different amino acid.
[0390] Embodiment 21: A procoagulant protein according to
embodiment 20, wherein the heavy chain of (ii) comprises: [0391] a
CDR1 sequence of amino acids 50 to 54 (DYFMY) of SEQ ID NO: 34; and
[0392] a CDR2 sequence of amino acids 69 to 85 (YISNGGDSSSYPDTVKG)
of SEQ ID NO: 34; and [0393] a CDR3 sequence of amino acids 118 to
129 (NKNWDDYYDMDY) of SEQ ID NO: 34, and wherein the light chain of
(ii) comprises: [0394] a CDR1 sequence of amino acids 44 to 60
(KSSQSLLNSRTRKNYLA) of SEQ ID NO: 35; and [0395] a CDR2 sequence of
amino acids 76 to 82 (WASTRES) of SEQ ID NO: 35; and [0396] a CDR3
sequence of amino acids 115 to 122 (KQSYNLLT) of SEQ ID NO: 35.
[0397] Embodiment 22: The procoagulant protein according to any one
of embodiments 13-15, wherein the epitope of (ii) comprises one or
more residues selected from the group consisting of L36, P37, E38,
G39, C40, Q41, P42, L43, V44, S45, S46, A47, V73, T74, L75, Q76,
E77, E78, D79, A80, G81, E82, Y83, G84, C85, M86, R91, G92, P93,
Q94, I95, L96, H97, R98, V99, S100 and L101 of SEQ ID NO: 5.
[0398] Embodiment 23: The procoagulant protein according to any one
of embodiments 13-15, wherein (ii) is an antibody, or a fragment
thereof, which is capable of binding to the same epitope as
mAb0051.
[0399] Embodiment 24: A procoagulant protein according to any one
of embodiments 22-23, wherein the heavy chain of (ii) comprises:
[0400] a CDR1 sequence of amino acids 50 to 54 (DYSMH) of SEQ ID
NO: 36, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0401] a CDR2 sequence of amino acids
69 to 85 (VISTYYGDVRYNQKFKG) of SEQ ID NO: 36, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0402] a CDR3 sequence of amino acids
118 to 129 (APMITTGAWFAY) of SEQ ID NO: 36, wherein one, two or
three of these amino acids may be substituted by a different amino
acid.
[0403] Embodiment 25: A procoagulant protein according to any of
embodiments 22-24, wherein the light chain of (ii) comprises:
[0404] a CDR1 sequence of amino acids 44 to 54 (KASQSVSNDVA) of SEQ
ID NO: 37, wherein one, two or three of these amino acids may be
substituted with a different amino acid; and/or [0405] a CDR2
sequence of amino acids 70 to 76 (YASSRYT) of SEQ ID NO: 37,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0406] a CDR3 sequence of amino acids
109 to 117 (QQDYSSPYT) of SEQ ID NO: 37, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0407] Embodiment 26: A procoagulant protein according to any one
of embodiments 22-23, wherein the heavy chain of (ii) comprises:
[0408] a CDR1 sequence of amino acids 50 to 54 (DYSMH) of SEQ ID
NO: 36, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0409] a CDR2 sequence of amino acids
69 to 85 (VISTYYGDVRYNQKFKG) of SEQ ID NO: 36, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0410] a CDR3 sequence of amino acids
118 to 129 (APMITTGAWFAY) of SEQ ID NO: 36, wherein one, two or
three of these amino acids may be substituted by a different amino
acid.
[0411] and wherein the light chain of (ii) comprises: [0412] a CDR1
sequence of amino acids 44 to 54 (KASQSVSNDVA) of SEQ ID NO: 37,
wherein one, two or three of these amino acids may be substituted
with a different amino acid; and/or [0413] a CDR2 sequence of amino
acids 70 to 76 (YASSRYT) of SEQ ID NO: 37, wherein one or two of
these amino acids may be substituted with a different amino acid;
and/or [0414] a CDR3 sequence of amino acids 109 to 117 (QQDYSSPYT)
of SEQ ID NO: 37, wherein one or two of these amino acids may be
substituted with a different amino acid.
[0415] Embodiment 27: A procoagulant protein according to
embodiment 26, wherein the heavy chain of (ii) comprises: [0416] a
CDR1 sequence of amino acids 50 to 54 (DYSMH) of SEQ ID NO: 36; and
[0417] a CDR2 sequence of amino acids 69 to 85 (VISTYYGDVRYNQKFKG)
of SEQ ID NO: 36; and [0418] a CDR3 sequence of amino acids 118 to
129 (APMITTGAWFAY) of SEQ ID NO: 36; and wherein the light chain of
(ii) comprises: [0419] a CDR1 sequence of amino acids 44 to 54
(KASQSVSNDVA) of SEQ ID NO: 37; and [0420] a CDR2 sequence of amino
acids 70 to 76 (YASSRYT) of SEQ ID NO: 37; and [0421] a CDR3
sequence of amino acids 109 to 117 (QQDYSSPYT) of SEQ ID NO:
37.
[0422] Embodiment 28: The procoagulant protein according to any one
of embodiments 13-15, wherein the epitope of (ii) comprises one or
more residues selected from the group consisting of V17, Q18, C19,
H20, Y21, R22, L23, Q24, D25, V26, K27, A28, R91, G92, P93, Q94,
I95, L96, H97, R98, V99, S100 and L101 of SEQ ID NO: 5.
[0423] Embodiment 29: The procoagulant protein according to any one
of embodiments 13-15, wherein (ii) is an antibody, or a fragment
thereof, which is capable of binding to the same epitope as
mAb0062.
[0424] Embodiment 30: A procoagulant protein according to any one
of embodiments 28-29, wherein the heavy chain of (ii) comprises:
[0425] a CDR1 sequence of amino acids 50 to 54 (SHWIE) of SEQ ID
NO: 42, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0426] a CDR2 sequence of amino acids
69 to 85 (EILPGSGNTNYNEKFKG) of SEQ ID NO: 42, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0427] a CDR3 sequence of amino acids
118 to 130 (GYYGLNYDWYFDV) of SEQ ID NO: 42, wherein one, two or
three of these amino acids may be substituted by a different amino
acid.
[0428] Embodiment 31: A procoagulant protein according to any of
embodiments 28-30, wherein the light chain of (ii) comprises:
[0429] a CDR1 sequence of amino acids 44 to 54 (RASQDISNYLN) of SEQ
ID NO: 39, wherein one, two or three of these amino acids may be
substituted with a different amino acid; and/or [0430] a CDR2
sequence of amino acids 70 to 76 (YTSRLHS) of SEQ ID NO: 39,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0431] a CDR3 sequence of amino acids
109 to 117 (QQDTKLPYT) of SEQ ID NO: 39, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0432] Embodiment 32: A procoagulant protein according to any of
embodiments 28-31, wherein the heavy chain of (ii) comprises:
[0433] a CDR1 sequence of amino acids 50 to 54 (SHWIE) of SEQ ID
NO: 42, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0434] a CDR2 sequence of amino acids
69 to 85 (EILPGSGNTNYNEKFKG) of SEQ ID NO: 42, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0435] a CDR3 sequence of amino acids
118 to 130 (GYYGLNYDWYFDV) of SEQ ID NO: 42, wherein one, two or
three of these amino acids may be substituted by a different amino
acid.
[0436] and wherein the light chain of (ii) comprises: [0437] a CDR1
sequence of amino acids 44 to 54 (RASQDISNYLN) of SEQ ID NO: 39,
wherein one, two or three of these amino acids may be substituted
with a different amino acid; and/or [0438] a CDR2 sequence of amino
acids 70 to 76 (YTSRLHS) of SEQ ID NO: 39, wherein one or two of
these amino acids may be substituted with a different amino acid;
and/or [0439] a CDR3 sequence of amino acids 109 to 117 (QQDTKLPYT)
of SEQ ID NO: 39, wherein one or two of these amino acids may be
substituted with a different amino acid.
[0440] Embodiment 33: A procoagulant protein according to
embodiment 32, wherein the heavy chain of (ii) comprises: [0441] a
CDR1 sequence of amino acids 50 to 54 (SHWIE) of SEQ ID NO: 42; and
[0442] a CDR2 sequence of amino acids 69 to 85 (EILPGSGNTNYNEKFKG)
of SEQ ID NO: 42; and [0443] a CDR3 sequence of amino acids 118 to
130 (GYYGLNYDWYFDV) of SEQ ID NO: 42; and wherein the light chain
of (ii) comprises: [0444] a CDR1 sequence of amino acids 44 to 54
(RASQDISNYLN) of SEQ ID NO: 39; and [0445] a CDR2 sequence of amino
acids 70 to 76 (YTSRLHS) of SEQ ID NO: 39; and [0446] a CDR3
sequence of amino acids 109 to 117 (QQDTKLPYT) of SEQ ID NO:
39.
[0447] Embodiment 34: The procoagulant protein according to any one
of embodiments 13-15, wherein the epitope of (ii) comprises one or
more residues selected from the group consisting of E5, T6, H7, K8,
I9, G10, S11, L12, A13, E14, N15, A16, F17, S18, D19, P20 and A21
of SEQ ID NO: 7.
[0448] Embodiment 35: The procoagulant protein according to
embodiment 34, wherein said residues are K8, I9, G10, S11, L12,
A13, N15, A16, F17, S18, D19, P20 and A21.
[0449] Embodiment 36: The procoagulant protein according to any one
of embodiments 13-15, wherein the epitope of (ii) comprises one or
more residues selected from the group consisting of K118, 1119,
G120, S121, L122, A123, E124, N125, A126, F127 of SEQ ID NO: 6.
[0450] Embodiment 37: The procoagulant protein according to any one
of embodiments 13-15, wherein (ii) is an antibody, or a fragment
thereof, which is capable of binding to the same epitope as mAb0061
or mAb0082.
[0451] Embodiment 38: A procoagulant protein according to any one
of embodiments 34-37, wherein the heavy chain of (ii) comprises:
[0452] a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID
NO: 40, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0453] a CDR2 sequence of amino acids
68 to 84 (EINPDSSTINYNPSLKD) of SEQ ID NO: 40, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0454] a CDR3 sequence of amino acids
117 to 121 (GVFTS) of SEQ ID NO: 40, wherein one, two or three of
these amino acids may be substituted by a different amino acid.
[0455] Embodiment 39: A procoagulant protein according to any of
embodiments 34-38, wherein the light chain of (ii) comprises:
[0456] a CDR1 sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFH)
of SEQ ID NO: 41, wherein one, two, three or four of these amino
acids may be substituted with a different amino acid; and/or [0457]
a CDR2 sequence of amino acids 74 to 80 (KVSNRFS) of SEQ ID NO: 41,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0458] a CDR3 sequence of amino acids
113 to 121 (SQSTHVPYT) of SEQ ID NO: 41, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0459] Embodiment 40: A procoagulant protein according to any of
embodiments 34-39, wherein the heavy chain of (ii) comprises:
[0460] a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID
NO: 40, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0461] a CDR2 sequence of amino acids
68 to 84 (EINPDSSTINYNPSLKD) of SEQ ID NO: 40, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0462] a CDR3 sequence of amino acids
117 to 121 (GVFTS) of SEQ ID NO: 40, wherein one, two or three of
these amino acids may be substituted by a different amino acid.
[0463] and wherein the light chain of (ii) comprises: [0464] a CDR1
sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFH) of SEQ ID NO:
41, wherein one, two, three or four of these amino acids may be
substituted with a different amino acid; and/or [0465] a CDR2
sequence of amino acids 74 to 80 (KVSNRFS) of SEQ ID NO: 41,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0466] a CDR3 sequence of amino acids
113 to 121 (SQSTHVPYT) of SEQ ID NO: 41, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0467] Embodiment 41: A procoagulant protein according to
embodiment 40, wherein the heavy chain of (ii) comprises: [0468] a
CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID NO: 40; and
[0469] a CDR2 sequence of amino acids 68 to 84 (EINPDSSTINYNPSLKD)
of SEQ ID NO: 40; and [0470] a CDR3 sequence of amino acids 117 to
121 (GVFTS) of SEQ ID NO: 40;
[0471] and wherein the light chain of (ii) comprises: [0472] a CDR1
sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFH) of SEQ ID NO:
41; and [0473] a CDR2 sequence of amino acids 74 to 80 (KVSNRFS) of
SEQ ID NO: 41; and [0474] a CDR3 sequence of amino acids 113 to 121
(SQSTHVPYT) of SEQ ID NO: 41.
[0475] Embodiment 42: A procoagulant protein according to any of
embodiments 34-37, wherein the heavy chain of (ii) comprises:
[0476] a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID
NO: 50, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0477] a CDR2 sequence of amino acids
68 to 84 (EINPDSSTINYAPSLKD) of SEQ ID NO: 50, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0478] a CDR3 sequence of amino acids
117 to 121 (GVFTS) of SEQ ID NO: 50, wherein one of these amino
acids may be substituted by a different amino acid; and wherein the
light chain of (ii) comprises: [0479] a CDR1 sequence of amino
acids 43 to 58 (RSSQSLVHRNGNTYFH) of SEQ ID NO: 41, wherein one,
two, three or four of these amino acids may be substituted with a
different amino acid; and/or [0480] a CDR2 sequence of amino acids
74 to 80 (KVSNRFS) of SEQ ID NO: 41, wherein one or two of these
amino acids may be substituted with a different amino acid; and/or
[0481] a CDR3 sequence of amino acids 113 to 121 (SQSTHVPYT) of SEQ
ID NO: 41, wherein one or two of these amino acids may be
substituted with a different amino acid.
[0482] Embodiment 43: A procoagulant protein according to
embodiment 42, wherein the heavy chain of (ii) comprises: [0483] a
CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID NO: 50; and
[0484] a CDR2 sequence of amino acids 68 to 84 (EINPDSSTINYAPSLKD)
of SEQ ID NO: 50; and [0485] a CDR3 sequence of amino acids 117 to
121 (GVFTS) of SEQ ID NO: 50;
[0486] and wherein the light chain of (ii) comprises: [0487] a CDR1
sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFH) of SEQ ID NO:
41; and [0488] a CDR2 sequence of amino acids 74 to 80 (KVSNRFS) of
SEQ ID NO: 41; and [0489] a CDR3 sequence of amino acids 113 to 121
(SQSTHVPYT) of SEQ ID NO: 41.
[0490] Embodiment 44: The procoagulant protein according to any one
of embodiments 13-15, wherein the paratope of (ii) comprises one or
more residues selected from the group consisting of H50, N52, Y56,
H58, Y73, F79, S115, T116, V118 and Y120 of the anti-TLT-1 light
(L) chain (SEQ ID NO: 33), and residues V20, F45, R49, Y50, W51,
E68, T75, N77, S116, G117, V118 and T120 of the anti-TLT-1 heavy
(H) chain (SEQ ID NO: 32)
[0491] Embodiment 45: The procoagulant protein according to any one
of embodiments 13-15 and 44, wherein the epitope of (ii) comprises
one or more residues selected from the group consisting of K133,
I134, G135, S136, L137, A138, N140, A141, F142, S143, D144, P145
and A146 of SEQ ID NO: 4.
[0492] Embodiment 46: The procoagulant protein according to any one
of embodiments 13-15, wherein (ii) is an antibody, or a fragment
thereof, which is capable of binding to the same epitope as
mAb0012.
[0493] Embodiment 47: A procoagulant protein according to any of
embodiments 44-46, wherein the heavy chain of (ii) comprises:
[0494] a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID
NO: 32, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0495] a CDR2 sequence of amino acids
68 to 84 (EINPDSSTINYTPSLKD) of SEQ ID NO: 32, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0496] a CDR3 sequence of amino acids
117 to 121 (GVFTS) of SEQ ID NO: 32, wherein one, two or three of
these amino acids may be substituted by a different amino acid.
[0497] Embodiment 48: A procoagulant protein according to any of
embodiments 44-47, wherein the light chain of (ii) comprises:
[0498] a CDR1 sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFTH)
of SEQ ID NO: 33, wherein one, two, three or four of these amino
acids may be substituted with a different amino acid; and/or [0499]
a CDR2 sequence of amino acids 74 to 80 (KVSNRFS) of SEQ ID NO: 33,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0500] a CDR3 sequence of amino acids
113 to 121 (SQSTHVPYT) of SEQ ID NO: 33, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0501] Embodiment 49: A procoagulant protein according to any of
embodiments 44-48, wherein the heavy chain of (ii) comprises:
[0502] a CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID
NO: 32, wherein one of these amino acids may be substituted by a
different amino acid; and/or [0503] a CDR2 sequence of amino acids
68 to 84 (EINPDSSTINYTPSLKD) of SEQ ID NO: 32, wherein one, two,
three or four of these amino acids may be substituted by a
different amino acid; and/or [0504] a CDR3 sequence of amino acids
117 to 121 (GVFTS) of SEQ ID NO: 32, wherein one, two or three of
these amino acids may be substituted by a different amino acid
[0505] and wherein the light chain of (ii) comprises: [0506] a CDR1
sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFTH) of SEQ ID NO:
33, wherein one, two, three or four of these amino acids may be
substituted with a different amino acid; and/or [0507] a CDR2
sequence of amino acids 74 to 80 (KVSNRFS) of SEQ ID NO: 33,
wherein one or two of these amino acids may be substituted with a
different amino acid; and/or [0508] a CDR3 sequence of amino acids
113 to 121 (SQSTHVPYT) of SEQ ID NO: 33, wherein one or two of
these amino acids may be substituted with a different amino
acid.
[0509] Embodiment 50: A procoagulant protein according to
embodiment 49, wherein the heavy chain of (ii) comprises: [0510] a
CDR1 sequence of amino acids 49 to 53 (RYWMT) of SEQ ID NO: 32; and
[0511] a CDR2 sequence of amino acids 68 to 84 (EINPDSSTINYTPSLKD)
of SEQ ID NO: 32; and [0512] a CDR3 sequence of amino acids 117 to
121 (GVFTS) of SEQ ID NO: 32;
[0513] and wherein the light chain of (ii) comprises: [0514] a CDR1
sequence of amino acids 43 to 58 (RSSQSLVHRNGNTYFTH) of SEQ ID NO:
33; and [0515] a CDR2 sequence of amino acids 74 to 80 (KVSNRFS) of
SEQ ID NO: 33; and [0516] a CDR3 sequence of amino acids 113 to 121
(SQSTHVPYT) of SEQ ID NO: 33.
[0517] Embodiment 51: The procoagulant protein according to any one
of embodiments 1-50, wherein (ii) is a human monoclonal antibody or
a fragment thereof.
[0518] Embodiment 52: The procoagulant protein according to any one
of embodiments 1-50, wherein (ii) is a chimeric antibody or a
fragment thereof.
[0519] Embodiment 53: The procoagulant protein according to any one
of embodiments 1-50, wherein (ii) is a humanised antibody or a
fragment thereof.
[0520] Embodiment 54: The procoagulant protein according to any one
of embodiments 51-53, wherein the isotype of (ii) is IgG.
[0521] Embodiment 55: The procoagulant protein according to
embodiment 54, wherein the isotype is IgG1, IgG2 or IgG4.
[0522] Embodiment 56: The procoagulant protein according to
embodiment 55, wherein the isotype is IgG4.
[0523] Embodiment 57: The procoagulant protein according to any one
of embodiments 1-56, further comprising a linker between (i) and
(ii).
[0524] Embodiment 58: The procoagulant protein according to any one
of embodiments 1-57, which is a fusion protein.
[0525] Embodiment 59: The procoagulant protein according to any one
of embodiments 1-57, which is a conjugate of (i) and (ii).
[0526] Embodiment 60: The conjugate according to embodiment 59,
wherein (i) and (ii) are covalently connected by a linker
comprising polyethyleneglycol (PEG).
[0527] Embodiment 61: The conjugate according to any one of
embodiments 59-60, wherein (i) and (ii) are covalently conjugated
via a glycan of at least one of said proteins.
[0528] Embodiment 62: A process for preparing a composition
comprising at least one conjugate according to any one of
embodiments 59-61, comprising chemically conjugating (i) the -TLT-1
antibody or fragment thereof with one reactive group (RS1) of a
linker and reacting (ii) the coagulation factor with another
reactive group (RS2) of said linker.
[0529] Embodiment 63: The process as defined in embodiment 62,
wherein (i) is a monoclonal antibody.
[0530] Embodiment 64: The process as defined in embodiment 62,
wherein (i) is a fragment of a monoclonal antibody.
[0531] Embodiment 65: The process as defined in embodiment 64,
wherein (i) is a Fab fragment.
[0532] Embodiment 66: The process as defined in embodiment 65,
wherein said Fab fragment contains one Cys mutation in the constant
region.
[0533] Embodiment 67: The process as defined in embodiment 62,
wherein (i) is a scFab fragment.
[0534] Embodiment 68: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FV polypeptide.
[0535] Embodiment 69: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FVIIa polypeptide.
[0536] Embodiment 70: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FVIII polypeptide.
[0537] Embodiment 71: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FIX polypeptide.
[0538] Embodiment 72: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FX polypeptide.
[0539] Embodiment 73: The process as defined in any one of
embodiments 62-67, wherein (ii) is a FXI polypeptide.
[0540] Embodiment 74: The process as defined in any one of
embodiments 62-73, wherein said linker is a water soluble.
[0541] Embodiment 75: The process as defined in any one of
embodiments 62-74, wherein said linker is polymer.
[0542] Embodiment 76: The process as defined in any one of
embodiments 74-75, wherein (ii) is polyethylene glycol (PEG).
[0543] Embodiment 77: The process as defined in any one of
embodiments 74-75, wherein (ii) is polysialic acid.
[0544] Embodiment 78: The process as defined in any one of
embodiments 74-75, wherein (ii) is hydroxyethyl starch.
[0545] Embodiment 79: The process as defined in any one of
embodiments 62-78, wherein RS1 is an aldehyde.
[0546] Embodiment 80: The process as defined in any one of
embodiments 62-78, wherein RS1 is a maleimide group.
[0547] Embodiment 81: The process as defined in any one of
embodiments 62-78, wherein RS1 is activated carbohydrate derivative
capable of reacting in an enzyme-catalysed reaction.
[0548] Embodiment 82: The process as defined in any one of
embodiments 81, wherein RS1 is an activated sialic acid derivative
capable of reacting in an enzyme-catalysed reaction.
[0549] Embodiment 83: The process as defined in embodiment 82,
wherein RS1 is O.sup.2-[5']cytidylyl-.xi.-neuraminic acid.
[0550] Embodiment 84: The process as defined in any one of
embodiments 62-83, wherein RS2 is an aldehyde.
[0551] Embodiment 85: The process as defined in any one of
embodiments 62-83, wherein RS2 is a maleimide group.
[0552] Embodiment 86: The process as defined in any one of
embodiments 62-83, wherein RS2 is activated carbohydrate derivative
capable of reacting in an enzyme-catalysed reaction.
[0553] Embodiment 87: The process as defined in any one of
embodiments 62-83, wherein RS2 is a sialic acid derivative.
[0554] Embodiment 88: The procoagulant protein according to any one
of embodiments 1-61, in which (ii) has a K.sub.D of less than 100
nM, such as less than 10 nM.
[0555] Embodiment 89: A method of targeting a coagulation factor,
or a functional fragment thereof, to the surface of activated
platelets, said method comprising the contacting of activated
platelets with a procoagulant protein according to any one of
embodiments 1-61.
[0556] Embodiment 90: A procoagulant protein according to any one
of embodiments 1-61 for use as a medicament.
[0557] Embodiment 91: The procoagulant protein of embodiment 87 for
use as a procoagulant.
[0558] Embodiment 92: A pharmaceutical formulation comprising the
procoagulant protein according to any one of embodiments 1-61.
[0559] Embodiment 93: The procoagulant protein according to any one
of embodiments 1-61 or the pharmaceutical formulation according to
embodiment 92 for use in the treatment of a coagulopathy.
[0560] Embodiment 94: Use of the procoagulant protein according to
any one of embodiments 1-61 for the manufacture of a medicament for
the treatment of a coagulopathy.
[0561] Embodiment 95: Use according to any one of embodiments 93 or
94, wherein said coagulopathy is haemophilia A, with or without
inhibitors, or haemophilia B, with or without inhibitors.
[0562] Embodiment 96: A method of treating coagulopathy, comprising
administering an effective amount of the procoagulant protein
according to any one of embodiments 1-61 or the formulation of
embodiment 93 to an individual in need thereof.
[0563] Embodiment 97: The method according to embodiment 95,
wherein said coagulopathy is haemophilia A, with or without
inhibitors, and haemophilia B, with or without inhibitors.
[0564] Embodiment 98: A polynucleotide that encodes the
procoagulant protein according to any one of embodiments 1-61.
[0565] Embodiment 99: An isolated cell that comprises the fusion
protein according to any one of embodiments 1-61 and/or the
polynucleotide according to embodiment 97.
[0566] Embodiment 100: A procoagulant protein to any one of
embodiments 1-61, wherein (ii) bind to TLT-1 without competing with
fibrinogen binding to TLT-1.
[0567] Embodiment 101: A procoagulant protein to any one of
embodiments 1-61, wherein (ii) does not inhibit platelet
aggregation.
[0568] The present invention is further illustrated by the
following examples which should not be construed as further
limiting. The contents of all figures and all references cited
throughout this application are expressly incorporated herein by
reference.
EXAMPLES
[0569] In the examples, anti-TLT-1 antibodies and fragments
thereof, e.g. Fab fragments, were used to target coagulation
factors to activated platelets. To ease interpretation of the data
presented in the examples, Table 3a summarizes information
regarding some of the anti-TLT-1 antibodies and fragments thereof
further described below. In Table 3A, parent antibodies, variants,
fragments, fusions and conjugates thereof are listed with reference
to the parent mAb and type of protein. Name refers to the name of
the protein, Parent refers to the antibody from which the
anti-TLT-1 mAb, Fab or fusion/conjugate is derived and Type defines
if the protein is a mAb, a Fab, a DNA fusion (fusion) with a
coagulation factor or a chemical conjugate with a coagulation
factor (conjugate).
TABLE-US-00006 TABLE 3A Overview of antibodies (mAbs), antibody
fragments (Fabs) and Fusion-proteins Name Parent Type mAb0012
mAb0012 mAb mAb0023 mAb0023 mAb mAb0051 mAb0051 mAb mAb0052 mAb0052
mAb mAb0061 mAb0012 mAb mAb0062 mAb0052 mAb mAb0082 mAb0012 mAb
Fab0003 mAb0052 Fab Fab0004 mAb0023 Fab Fab0012 mAb0012 Fab Fab0023
mAb0023 Fab Fab0051 mAb0051 Fab Fab0052 mAb0052 Fab Fab0061 mAb0012
Fab Fab0074 mAb0051 Fab Fab0082 mAb0012 Fab Fab0084 mAb0012 Fab
FVIIa-Fab1001 mAb0012 Conjugate (FVIIa) FVIIa-Fab1029 mAb0012
Conjugate (FVIIa) FVII-Fab5001 mAb0052 Fusion (FVII) FVIIa-Fab9015
mAb0012 Conjugate (FVIIa) FIX-Fab0135 mAb0012 Fusion (FIX)
FIX-mAb0145 mAb0012 Conjugate (FIX) FIX-Fab0155 mAb0012 Conjugate
(FIX)
Example 1
Cloning and Expression of hTLT-1 ECD-his Antigen
[0570] Nucleotide sequences encoding the extracellular domain of
human TLT-1 (hTLT-1) (FIG. 1) together with a C-terminal His-6 tag
were PCR amplified with a forward primer containing a HindIII
recognition site together with a kozak sequence, and a reverse
primer containing a stop codon and an EcoRI recognition site (FIG.
2). The HindIII- and EcoRI digested PCR fragment was inserted into
the HindIII- and EcoRI sites of a pTT-based expression vector. The
pTT vector is essentially described in Durocher, Y. et al., (2002)
Nucleic Acid Res, 30: E9. The resulting expression plasmid was
designated pTT-hTLT-1 ECD-His. The nucleotide and amino acid
sequences for hTLT-1 ECD-His is shown in SEQ ID NO: 3 and 4.
pTT-hTLT-1 ECD-His was transfected into HEK293-6E suspension cells
in order to transiently express hTLT-1 ECD-His. HEK293-6E cells
were grown in Freestyle HEK293 medium (GIBCO, cat. no. 12338-018)
supplemented with 1% P/S (GIBCO cat. no. 15140-122), 0.1% pluronic
(GIBCO, cat. no. 24040-032) and 25 ug/mL Geneticin (GIBCO, cat. no.
10131-019) and cells were transfected at a cell density of 1
mill/mL using 293fectin (Invitrogen, cat. no. 12347-019). For each
liter of HEK293-6E cells, the transfection was performed by
diluting 1 mg of pTT-hTLT-1 ECD-His DNA into 30 mL Optimem
(dilution A) and by diluting 1 mL 293fectin into 30 mL Optimem
(GIBCO, cat. no. 51985-026, dilution B). Dilution A and B were
mixed and incubated at room temperature for 30 minutes. The
transfection mix was hereafter added to the HEK293-6E cells and
cells were incubated at 37.degree. C. in a hunified incubator with
orbital rotation (125 rpm). Five to seven days post-tranfection,
cells were removed by centrifugation and the resulting hTLT-1
ECD-His containing supernatants were sterile-filtrated prior to
purification.
Example 2
Purification and Characterisation of hTLT-1 ECD-his Protein
[0571] Purification of the hTLT-1 ECD-His protein was conducted as
a 2-step process composed of 1) His-affinity chromatography using
the Cobalt-loaded resin TALON (Clontech, cat. no. 635506) and 2)
anion-exchange chromatography using the fine-particle resin Source
15Q (GE Healthcare, cat. no. 17-0947). The purifications were
conducted using an AktaExplorer chromatography system (GE
Healthcare, cat. no. 18-1112-41). The buffer systems used for the
first purification step was an equilibration buffer composed of 20
mM Hepes, pH 7.0, 150 mM NaCl, a wash buffer composed of 20 mM
Hepes, pH 7.0, 0.5 M NaCl and an elution buffer composed of 20 mM
Hepes, pH 7.0, 150 mM Imidazole. The cell supernatant was applied
directly without any adjustments onto a pre-equilibrated TALON
column. The column was washed with 20 column volumes of
equilibration buffer, 20 column volumes of wash buffer and last
with 20 column volumes of equilibration buffer. The protein was
eluted isocratically in approximately 5 column volumes of elution
buffer. The molecular mass of the eluted protein was analysed using
SDS-PAGE/Coomassie NuPage 4-12% Bis-Tris gels (Invitrogen, cat. no.
NP0321BOX) and Matrix Assisted Laser Desorption Ionisation
Time-of-Flight Mass Spectrometry (MALDI-TOF MS) setup on a
Micro-flex system (Bruker Daltonics). Here, two distinct protein
masses were observed of approximately 16.7 and 33.4 kDa of almost
equal amounts. The observed masses corresponded to monomer and
dimer forms of hTLT-1 ECD-His. Reducing the protein resulted in
complete abolishment of the 33.4 kDa protein, while intensifying
the 16.7 kDa protein as judged from a SDS-PAGE/Coomassie analysis.
Thus, the hTLT-1 ECD-His protein contained an interlinked C--C
dimer. To segregate monomer from dimer, a second purification step
was employed. The buffer systems used for this purification step
was an equilibration buffer composed of 50 mM Hepes, pH 8.0 and an
elution buffer composed of 50 mM Hepes, pH 8.0, 1 M NaCl. The
sample was adjusted to a pH of 8.0 using 1 M NaOH and then diluted
to a conductivity of approximately 10 mS/cm. The protein was
applied to a pre-equilibrated Source 15Q column, washed with 5
column volumes of equilibration and eluted using 0-100% elution
buffer over 20 column volumes. Based on UV280 monitoring, two peaks
were apparent with almost base-line separation. Analyzing fractions
over the two peaks using SDS-PAGE/Coomassie, MALDI-TOF MS and
Dynamic Light-Scattering (DLS) using a Dynapro instrument (Wyatt
Technology) analyses showed the presence of monomer hTLT-1 ECD-His
protein in the peak eluting first and Cys-Cys dimer in the peak
eluting second. A pool was prepared containing the monomer hTLT-1
ECD-His protein only. The final protein integrity was analyzed
based on a Size-Exclusion High-Performance Liquid Chromatographic
(SEC-HPLC) method setup on an Agilent LC 1100/1200 system and using
a BIOSep-SEC-S3000 300.times.7.8 mm column (Phenomenex, cat. no.
00H-2146-K0) and a running buffer composed of 200 mM NaPhosphate pH
6.9, 300 mM NaCl and 10% isopropanol. The protein eluted as a
single symmetric peak at a retention time of approximately 9.9 min
at a flow rate of 1 ml/min.
[0572] A batch of hTLT-1 ECD-His was prepared for an immunization
study for production of monoclonal anti-TLT-1 antibodies. Thus, the
protein was dialyzed into an isotonic PBS buffer using a
Slide-A-Lyzer Dialysis Cassette 10 kDa MWCO (Pierce, cat. no.
66453). To measure the final protein concentration, a NanoDrop
spectropho-tometer (Thermo Scientific) was used together with an
extinction coefficient of 0.55.
Example 3
Preparation of Monoclonal TLT-1 Antibodies
[0573] RBF mice were immunized by injecting 50 .mu.g of hTLT-1
ECD-His. FCA subcutaneously followed by two injections with 20
.mu.g of hTLT-1 ECD-His in FIA. High responder mice were boosted
intravenously with 25 .mu.g of hTLT-1 ECD-His and the spleens were
harvested after 3 days. Spleen cells were fused with the myeloma
Fox cell line. Supernatants were screened for hTLT-1 specific
antibody production in a specific ELISA and in a FACS assay
utilizing hTLT-1- or Mock-transfected CHO cells as positive and
negative target cells, respectively. A secondary screen was done on
resting versus dual agonistic activated platelets of human,
cynomolgous monkey, dog, rabbit or mouse origin.
Example 4
Cloning and Sequencing of Anti-TLT-1 mAb LC and HC cDNAs from
Hybridoma
[0574] Total RNA was extracted from four different anti-TLT-1 mAb
expressing hybridoma designated: 0012Hyb, 0023Hyb, 0051Hyb and
0052Hyb. The RNA was extracted from hybridoma cells using RNeasy
mini kit (Qiagen, cat. no. 74106) and an aliquot of the resulting
RNA was used as template for first-stranded cDNA synthesis using
SMART RACE cDNA Amplification kit (Clontech, cat. no. 634914)
following the instruction of the manufacturer for 5' RACE and using
5' RACE CDS primer A together with SMART II A RNA oligonucleotide.
The light chain (LC) and heavy chain (HC) coding region cDNAs from
each of the four anti-TLT-1 hybridomas were hereafter PCR amplified
using UPM forward primer mix together with either a mouse LC,kappa
specific reverse primer (reverse primer number 339, 348, or 610) or
together with a reverse primer recognizing mouse IgG1, IgG2a, IgG2b
or IgG3 sequences (reverse primer number 341, 347, 613, 614, 615,
or 616, primer sequences are shown in Table 4 and SEQ ID NOs
60-145). The PCR reactions were performed using phusion PCR mix
(FinnZymes, cat no.: F-531L). The resulting PCR fragments were
cloned using Zero blunt Topo PCR cloning kit for sequencing
(Invitrogen, cat. no. K287540) and sequenced. The variable domain
sequences for 0012LC and HC are shown in FIG. 3.
Example 5
Development of pTT-0012HC, pTT-0023HC, pTT-0051HC and pTT-0052HC
Expression Constructs
[0575] The HC variable domain (V.sub.H) encoding DNA sequences
isolated from each of the four different anti-TLT-1 hybridomas were
PCR amplified with forward primers containing a HinDIII restriction
enzyme site and reverse primers containing a NheI restriction
enzyme site for cloning purposes. The 0012V.sub.H, 0023V.sub.H,
0051V.sub.H and 0052V.sub.H DNA sequences were PCR amplified using
phusion PCR mix (FinnZymes, cat No. F-531L) with the following
primer number pairs: 490 (forward)+491 (reverse), 546 (forward)+547
(reverse), 627 (forward)+628 (reverse), and 617 (forward)+618
(reverse, primer sequences are shown in Table 4 and SEQ ID NOs
60-145), respectively, and inserted into the HinDIII and NheI
restriction enzyme sites of a pTT based vector designated
pTT-hIgG4, containing the constant region encoding sequences for
human IgG4 HC (ie CH1-hinge-CH2-CH3). The pTT vector is essentially
described in Durocher, Y. et al., (2002) Nucleic Acid Res, 30: E9
(FIG. 22). The resulting vectors were designated pTT-0012HC (FIG.
5), pTT-0023HC, pTT-0051HC, and pTT-0052HC. The anti-TLT-1 HC amino
acid sequences encoded by the expression vectors are shown (SEQ. ID
NO: 0012HC: 32, 0023HC: 34, 0051HC: 36, 0052HC: 38).
Example 6
Development of pTT-0012LC, pTT-0023LC, pTT-0051LC and pTT-0052LC
Expression Constructs
[0576] The LC variable domain (V.sub.L) encoding DNA sequences
isolated from each of the four different anti-TLT-1 hybridomas were
PCR amplified with forward primers containing a HinDIII restriction
enzyme site and reverse primers containing a BsiWI restriction
enzyme site for cloning purposes. The 0012V.sub.L, 0023V.sub.L,
0051V.sub.L and 0052V.sub.L DNA sequences were PCR amplified with
the following primers number pairs: 493 (forward)+495 (reverse),
548 (forward)+549 (reverse), 492 (forward)+494 (reverse), and 619
(forward)+620 (reverse primer sequences are shown in Table 4 and
SEQ ID NOs 60-145), respectively, and inserted into the HinDIII and
BsiWI restriction enzyme sites of a pTT-based vector designated,
pTT-hLC,Kappa, containing the constant region encoding sequences
for human LC, kappa. The resulting vectors were designated
pTT-0012LC, pTT-0023LC, pTT-0051LC, and pTT-0052LC. The anti-TLT-1
LC amino acid sequence encoded by the expression vectors are shown
in (SEQ ID NO: 0012LC: 33, 0023LC: 35, 0051LC: 37, 0052LC: 39).
Example 7
Development of pTT-0012HC.T60N, pTT-0012HC.T60A, pTT-0012LC.C36A
and pTT-0052HC.C91Y
[0577] The 0012V.sub.H amino acid sequence contains a potential
N-linked glycosylation site (T60, kabat numbering) and the
0012V.sub.L and the 0052V.sub.H amino acid sequences each contain
an unpaired Cys (C36 and C91, respectively, kabat numbering).
Expression vectors encoding 0012HC.T60N or 0012HC.T60A or
0012LC.C36A or 0052HC.C91Y were developed using site directed
mutagenesis (Quickchange II, Stratagene, Catalog number 20523-5)
following the instructions of the manufacturer. The site-directed
mutagenesis reactions were performed using a) pTT-0012HC DNA as
template and primer numbers 682 (forward)+683 (reverse) for
pTT-0012HC.T60N, b) pTT-0012HC DNA as template and primer numbers
688 (forward)+689 (reverse) for pTT-0012HC.T60A, c) pTT-0012LC DNA
as template and primer numbers 598 (forward)+599 (reverse) for
pTT-0012LC.C36A, d) pTT-0052HC DNA as template and the following
primer numbers 684 (forward)+685 (reverse, primer sequences are
shown in Table 4 and SEQ ID NOs 60-145) for pTT-0052HC.C91Y. The
resulting expression vectors were sequenced in order to verify DNA
sequences. The anti-TLT-1 HC and LC amino acid sequence encoded by
the pTT-0012HC.T60N, pTT-0012HC.T60A and pTT-0012LC.C36A expression
vectors are shown in (SEQ ID NO: 0012HC.T60N (also called 0061HC):
40, 0012HC.T60A (also called 0082HC): 43, 0012LC.C36A (also called
0061LC): 41). The 0012LC.C36A amino acid sequence is also shown
without the N-terminal signal peptide sequence in SEQ ID NO:
153.
Example 8
Development of pTT-0012LC-HPC4, pTT-0012LC.C36A-HPC4,
pTT-0023LC-HPC4, pTT-0051LC-HPC4 and pTT-0052LC-HPC4 Expression
Constructs
[0578] V.sub.L encoding DNA sequences isolated from each of the
four different anti-TLT-1 hybridomas were PCR amplified with
forward primers containing a HinDIII restriction enzyme site and
reverse primers containing a BsiWI restriction enzyme site for
cloning purposes. 0012V.sub.L, 0012V.sub.L.C36A, 0023V.sub.L,
0051V.sub.L and 0052V.sub.L DNA sequences were PCR amplified with
the following primer numbers: 493 (forward)+495 (reverse), 493
(forward)+495 (reverse), 548 (forward)+549 (reverse), 492
(forward)+494 (reverse), and 619 (forward)+620 (reverse, primer
sequences are shown in Table 4 and SEQ ID NOs: 60-145)
respectively, using phusion PCR mix (FinnZymes, cat No. F-531L).
The human C.sub.L,kappa encoding sequence was PCR amplified with
forward primer number 486 and reverse primer number 485. Forward
primer number 486 contains a BsiWI restriction enzyme site and
reverse primer 485 encodes a HPC4 tag followed by a stop codon and
contains a 3' flanking EcoRI site for cloning purposes. The PCR
reaction was performed using phusion PCR mix (FinnZymes, cat No.
F-531L). HindIII+BsiWI digested 0012V.sub.L PCR fragment was mixed
with BsiWI+EcoRI digested human C.sub.L,kappa-HPC4 PCR fragment and
inserted into the HinDIII+EcoRI sites of a pTT-based expression
vector resulting in pTT-0012LC-HPC4 (FIG. 4). In order to develop
corresponding expression vectors encoding the LC-HPC4 version of
the remaining four anti-TLT-1 LC sequences, the 0012V.sub.L
sequence in pTT-0012LC-HPC4 was excised with HinDIII+BsiWI and
replaced with HinDIII+BsiWI digested 0023V.sub.L, 0051V.sub.L,
0052V.sub.L and 0012V.sub.L.C36A PCR fragments. The resulting four
expression vectors were designated: pTT-0023LC-HPC4,
pTT-0051LC-HPC4, pTT-0052LC-HPC4 and pTT-0012LC.C36A.HPC4 (FIG.
4B). The amino acid sequences encoded by pTT-0012LC.C36A-HPC4,
pTT-0023LC-HPC4, pTT-0051LC-HPC4 and pTT-0052LC-HPC4 are shown in
SEQ ID NO: 0012LC.C36A-HPC4 (also called 0061LC-HPC4): 167,
0023LC-HPC4: 179, 0051LC-HPC4: 177, 0052LC-HPC4 (also called
0062LC-HPC4): 174.
Example 9
Development of pTT-0012V.sub.H.T60N-CH1-YGPPC,
pTT-0023V.sub.H-CH1-YGPPC, pTT-0051V.sub.H-CH1-YGPPC, and
pTT-0052V.sub.H.C91Y-CH1-YGPPC Expression Constructs
[0579] The 0012V.sub.H.T60N-CH1-YGPPC, 0023V.sub.H-CH1-YGPPC,
0051V.sub.H-CH1-YGPPC and 0052V.sub.H.C91Y-CH1-YGPPC sequence
(YGPPC is a partial human IgG4 hinge amino acid sequence) was PCR
amplified from pTT-0012HC.T60N, pTT-0023HC, pTT-0051HC and
pTT-0052HC.C91Y respectively using forward and reverse primer
pairs: 572 (forward)+698 (reverse), 576 (forward)+698 (reverse),
627 (forward)+698 (reverse) and 617 (forward)+698 (reverse),
respectively. The forward primers contain a HinDIII restriction
enzyme site and the reverse primer 698 contains a stop codon and an
EcoRI site for cloning purposes. The resulting PCR fragment was
digested with HinDIII+EcoRI and inserted into the HinDIII+EcoRI
sites of a pTT based vector. The resulting expression vectors were
designated pTT-0012V.sub.H.T60N-CH1-YGPPC (FIG. 4A),
pTT-0023V.sub.H-CH1-YGPPC, pTT-0051V.sub.H-CH1-YGPPC and
pTT-0052V.sub.H.C91Y-CH1-YGPPC. The amino acid sequences encoded by
pTT-0012V.sub.H.T60N-CH1-YGPPC (FIG. 4A),
pTT-0023V.sub.H-CH1-YGPPC, pTT-0051V.sub.H-CH1-YGPPC and
pTT-0052V.sub.H.C91Y-CH1-YGPPC is shown in SEQ ID NO:
0012V.sub.H.T60N-CH1-YGPPC (also called 0061VH-CH1-YGPPC): 171,
0023V.sub.H-CH1-YGPPC: 178, 0051V.sub.H-CH1-YGPPC 176,
0052V.sub.H.C91Y-CH1-YGPPC (also called 0062V.sub.H-CH1-YGPPC):
175.
Example 10
Development of pTT-0012V.sub.H-CH1, pTT-0012V.sub.H-CH1-HPC4,
pTT-0023V.sub.H-CH1, pTT-0023V.sub.H-CH1-HPC4, pTT-0051V.sub.H-CH1,
pTT-0051V.sub.H-CH1-HPC4, pTT-0052V.sub.H-CH1 and
pTT-0052V.sub.H-CH1-HPC4 Expression Constructs
[0580] The 0012V.sub.H, 0023V.sub.H, 0051V.sub.H, and 0052V.sub.H
sequences isolated from 0012Hyb, 0023Hyb, 0051Hyb, 0052Hyb were PCR
amplified with primer numbers: 490 (forward)+491 (reverse), 546
(forward)+547 (reverse), 627 (forward)+628 (reverse), 617
(forward)+618 (reverse, primer sequences are shown in Table 4 and
SEQ ID NOs 60-145), respectively, using phusion PCR mix (FinnZymes,
cat No. F-531L). All forward primers (490, 546, 627, and 617)
contained a HinDIII site and all reverse primers (491, 547, 628,
and 618) contained a NheI site for cloning purposes. The human
IgG.sub.4 CH1 region was PCR amplified either with primer numbers:
489 (forward)+488 (reverse), or primer numbers 489 (forward)+487
(reverse). Forward primer number 489 contained a NheI site, the 488
reverse primer number contained a stop codon and an EcoRI site, and
the 487 reverse primer number contained an HPC4 tag encoding
sequence, a stop codon followed by an EcoRI site for cloning
purposes. HinDIII+NheI digested 0012V.sub.H PCR fragment was
combined with either NheI+EcoRI digested human IgG.sub.4 CH1 PCR
fragment or with NheI+EcoRI digested human IgG.sub.4 CH1-HPC4 PCR
fragment and cloned into the HindIII+EcoRI sites for a pTT based
vector. The resulting vectors were designated pTT-0012V.sub.H-CH1
and pTT-0012V.sub.H-CH1-HPC4, respectively. The
pTT-0012V.sub.H-CH1-HPC4 vector is shown in FIG. 5B. The
0012V.sub.H-CH1-HPC4 amino acid and DNA sequences are shown in SEQ
ID NOs 168-169. The V.sub.H domains of pTT-0012V.sub.H-CH1 and of
pTT-0012V.sub.H-CH1-HPC4 were excised by HindIII+NheI digestion and
HinDIII+NheI digested 0197-0000-0023V.sub.H, 0197-0000-0051V.sub.H
and 0197-0000-0052V.sub.H PCR fragments were inserted. The
resulting expression vectors were designated: pTT-0023V.sub.H-CH1,
pTT-0023V.sub.H-CH1-HPC4, pTT-0051V.sub.H-CH1,
pTT-0051V.sub.H-CH1-HPC4, pTT-0052V.sub.H-CH1, and
pTT-0052V.sub.H-CH1-HPC4.
Example 11
Development of pTT-0012V.sub.H.T60N-CH1,
pTT-0012V.sub.H.T60N-CH1-HPC4, pTT-0052V.sub.H.C91Y-CH1 and
pTT-0052V.sub.H.C91Y-CH1-HPC4 Expression Constructs
[0581] The 0012V.sub.H.T60N-CH1 and 0052V.sub.H.C91Y-CH1 sequence
(including the signal peptide encoding sequence) was PCR amplified
from pTT-0012HC.T60N and pTT-0052HC.C91Y, respectively using
phusion PCR mix (FinnZymes, cat No. F-531L). For the
0012V.sub.H.T60N-CH1 PCR fragment the forward primer number 572
containing a HinDIII restriction enzyme site and reverse primer
number 488 containing a EcoRI site for cloning purposes or reverse
primer 487 containing a HPC4 tag encoding sequence together with a
EcoRI site for cloning purposes were employed. For the
0052V.sub.H.C91Y-CH1 PCR fragment the forward primer number 617
together with either reverse primer number 488 or 487 were employed
(primer sequences are shown in Table 4 and SEQ ID NOs 60-145). The
resulting PCR fragments were digested with HinDIII+EcoRI and
inserted into the HinDIII+EcoRI sites of a pTT based vector. The
resulting expression vectors were designated
pTT-0012V.sub.H.T60N-CH1, pTT-0012V.sub.H.T60N-CH1-HPC4,
pTT-0052V.sub.H.C91Y-CH1 and pTT-0052V.sub.H.C91Y-CH1-HPC4. The
amino acid sequence encoded by pTT-0012V.sub.H.T60N-CH1 is shown in
SEQ ID NO: 0012V.sub.H.T60N-CH1 (also called 0061VH-CH1): 146 while
the corresponding amino acid sequence without the N-terminal signal
peptide sequence is shown in SEQ ID NO: 152.
Example 12
Development of pTT-FIX-L4b-0012LC and pTT-FIX-L4b-0012LC.C36A
Expression Construct
[0582] The FIX DNA sequence (including the signalpeptide encoding
sequence) was PCR amplified from human FIX DNA sequences using
forward primer 753 and reverse primer 754. Forward primer 753
inserts a 5' end HinDIII restriction enzyme site and reverse primer
754 inserts a 17 amino acid long glycine-serine linker (L4b:
GGGGSGGGGSGGGGSGS) containing a 3' end BamHI restriction enzyme
site for cloning purposes. The FIX-L4b PCR fragment was inserted
into the HinDIII+BamHI sites of pTT-hTF.1-219-L4b-0012LC i.e.
replacing hTF.1-219 DNA sequences and resulting in the
FIX-L4b-0012LC expression construct designated pTT-FIX-L4b-0012LC
(FIG. 5A). The FIX-L4b-0012LC amino acid and DNA sequences are
shown in SEQ ID NO: 172-173.
[0583] In order to develop an expression plasmid encoding
pTT-FIX-L4b-0012LC.C36A the 0012LC.C36A coding region excluding the
signal peptide sequence was PCR amplified using pTT-0012LC.C36A as
template and using forward primer 1055 containing a 5' end BamHI
site and reverse primer 1056 containing a stop codon and an EcoRI
site for cloning purposes (Table 4). The resulting PCR fragment was
inserted into the BamHI and EcoRI sites of pTT-FIX-L4b-0012LC i.e.
replacing the 0012LC DNA sequence with 0012LC.C36A DNA sequence.
The resulting expression vector was called pTT-FIX-L4b-0012LC.C36A
and encode the amino acid sequences shown in SEQ ID NO:
FIX-L4b-0012LC.C36A (also called FIX-L4b-0061LC): 182.
Example 13
Development of pTT-FVII-L4b-0052V.sub.H.C91Y-CH1-HPC4 Expression
Construct
[0584] The human FVII DNA sequence (including the signalpeptide
encoding sequence) was PCR amplified from human FVII DNA sequences
using forward primer 751 and reverse primer 752. Forward primer 751
inserts a 5' end HinDIII restriction enzyme site and reverse primer
752 inserts a 17 amino acid long glycine-serine linker (L4b:
GGGGSGGGGSGGGGSGS) containing a 3' end BamHI restriction enzyme
site for cloning purposes. The FVII-L4b PCR fragment was inserted
into the HinDIII+BamHI sites of pTT-hTF.1-219-L4b-0012LC i.e.
replacing hTF.1-219 DNA sequences and resulting in the
FVII-L4b-0012LC expression construct designated
pTT-FVII-L4b-0012LC. The 0052V.sub.H C91Y-CH1-HPC4 encoding DNA
sequence was PCR amplified using pTT-0052V.sub.H.C91Y-CH1-HPC4
vector as template and using forward primer 1236 containing a 5'
end BamHI restriction enzyme site and using reverse primer 1095
containing a stop codon and an EcoRI site for cloning purposes. The
resulting PCR fragment was inserted into the BamHI+EcoRI site of
pTT-FVII-L4b-0012LC ie replacing the 0012LC sequence and resulting
in the expression vector designated
pTT-FVII-L4b-0052V.sub.H.C91Y-CH1-HPC4. The
FVII-L4b-0052V.sub.H.C91Y-CH1-HPC4 amino acid is shown in SEQ ID
NO: FVII-L4b-0052VH.C91Y-CH1-HPC4 (also called
FVII-L4b-0062VH-CH1-HPC4): 180.
Example 14
Transient Transfection of HEK293-6E Cells
[0585] All mAb, Fab, and fusion proteins were expressed in
HEK293-6E suspension cells by transient transfecting expression
plasmids into cells. Individual plasmids combinations underlying
the resulting specific protein compounds are shown in Table 5.
HEK293-6E cells were grown in Freestyle HEK293 medium (GIBCO, cat.
no. 12338-018) supplemented with 1% P/S (GIBCO cat. no. 15140-122),
0.1% pluronic (GIBCO, cat. no. 24040-032) and 25 .mu.g/mL Geneticin
(GIBCO, cat. no. 10131-019) and cells were transfected at a cell
density of approximately 1 mill/mL using 293fectin (Invitrogen,
cat. no. 12347-019) according to the instructions of the
manufacturer. In brief, for each liter of HEK293-6E cells, the
transfection was performed by diluting a total of 1 mg of DNA into
30 mL Optimem (dilution A) and by diluting 1 mL 293fectin into 30
mL Optimem (GIBCO, cat. no. 51985-026, dilution B). Dilution A and
B were mixed and incubated at room temperature for 30 minutes. The
transfection mix was hereafter added to the HEK293-6E cells and
cells were incubated at 37.degree. C. in a hunified incubator with
orbital rotation (125 rpm). Five to seven days post-tranfection,
cells were removed by centrifugation and the resulting cell culture
supernatants were sterile-filtrated prior to purification. For all
transient transfection experiments using co-transfection of 2
expression plasmids, the plasmids were cotransfected in a 1:1
(ug:ug) plasmid ratio using a total DNA amount of 1 mg for each
liter of HEK293-6E cells to be transfected.
TABLE-US-00007 TABLE 4 Primer numbers and sequences. Primer No.
Primer sequence (5' to 3') 339 act gga tgg tgg gaa gat gga tac agt
341 aga tcc agg ggc tag cgg ata gac aga 347 cct gta gga cca gag ggc
tcc aag gac act 348 gga gct ggt ggt ggc atc tca gga cct ttg 448 ttt
aaa aag ctt gcc gcc acc atg gag acc cct gcc tgg ccc cgg gtc 467 gga
acc tcc ccc gcc tga tcc ccc gcc acc aga ccc gcc acc tcc ttc tct aaa
ttc ccc ttt ctc ctg gcc cat 484 gaa ttt agc ggc cgc gaa ttc gga tcc
gga acc tcc ccc gcc tga tcc 485 aaa ttt gaa ttc tta ctt gcc gtc gat
cag tct ggg gtc cac ctg gtc ctc aca ctc tcc cct gtt gaa gct ctt tgt
gac 486 a cgg atc tct agc aag ctt cgt acg gtg gc 487 aaa ttt gaa
ttc tta ctt gcc gtc gat cag tct ggg gtc cac ctg gtc ctc ttt gga ctc
aac tct ctt gtc cac ctt ggt 488 aaa ttt gaa ttc tta ttt gga ctc aac
tct ctt gtc cac ctt ggt 489 acg gat ctc tag c aag ctt gct agc ac
caa 490 aaa ttt aag ctt gcc gcc acc atg gat ttt ggg ctg att ttt ttt
att gtt gct 491 aaa ttt gct agc tgc aga gac agt gac cag agt ccc ttg
gcc cca 492 aaa ttt aag ctt gcc gcc acc atg aag tca cag acc cag gtc
ttc gta ttt 493 aaa ttt aag ctt gcc gcc acc atg aag ttg cct gtt ggg
ctg ttg gtg ctg 494 aaa ttt cgt acg ttc tat ttc cag ctt ggt ccc ccc
tc 495 aaa ttt cgt acg ttt tat ttc cag ctt ggt ccc ccc tcc gaa 546
aaa ttt aag ctt gcc gcc acc atg aac ttg ggg ctc agc ttg att ttc ctt
gtc 547 aaa ttt gct agc tga gga gac ggt gac tga ggt tcc ttg acc 548
aaa ttt aag ctt gcc gcc acc atg gat tca cag gcc cag gtt ctt ata ttg
ctg 549 aaa ttt cgt acg ttt cag ctc cag ctt ggt ccc agc acc gaa 551
aaa ttt aaa ttt gga tcc gat gtt gtg atg acc caa act cca ctc tcc 572
aaa ttt aag ctt gcc gcc acc atg gat ttt ggg ctg att ttt ttt att gtt
gct 576 aaa ttt aag ctt gcc gcc acc atg aac ttg ggg ctc agc ttg att
ttc ctt 598 gga aac acc tat ttt cat tgg gcc ctg cag aaa cca ggc cag
tct 599 aga ctg gcc tgg ttt ctg cag ggc cca atg aaa ata ggt gtt tcc
610 gctctaga cta aca ctc att cct gtt gaa gct ctt g 613 aaaaa
tctagaata gac aga tgg ggg tgt cgt ttt ggc 614 aaaaa tctaga ctt gac
cag gca tcc tag agt ca 615 aaaaa tctaga agg ggc cag tgg ata gac tga
tgg 616 aaaaa tctaga agg gac caa ggg ata gac aga tgg 617 aaa ttt
aag ctt gcc gcc acc atg gaa tgg acc tgg gtc ttt ctc ttc ct 618 aaa
ttt gct agc tga gga gac ggt gac cgt ggt ccc tgc 619 aaa ttt aag ctt
gcc gcc acc atg atg tcc tct gct cag ttc ctt ggt 620 aaa ttt cgt acg
ttt cat ctc cag ttt ggt ccc ccc tcc 627 aaa ttt aag ctt gcc gcc acc
atg ggt tqg agc tgt atc atc ttc ttt ct 628 aaa ttt gct agc tgc aga
gac agt gac cag agt ccc ttg 682 gat agc agt acg ata aac tat aac cca
tct cta aag gat aaa ttc 683 gaa ttt atc ctt tag aga tgg gtt ata gtt
tat cgt act gct atc 684 tct gag gac tct gcc gtc tat tac tgt gca aga
ggg tac tac ggt 685 acc gta gta ccc tct tgc aca gta ata gac ggc aga
gtc ctc aga 688 gat agc agt acg ata aac tat gcg cca tct cta aag gat
aaa ttc 689 gaa ttt atc ctt tag aga tgg cgc ata gtt tat cgt act gct
atc 698 ttt aaa gaa ttc tca gca tgg ggg acc ata ttt gga ctc aac tct
ctt 751 ttt aaa aag ctt gcc gcc acc atg gtc tcc cag gcc ctc agg ctc
ctc 752 ttt aaa gga tcc gga acc tcc ccc gcc tga tcc ccc gcc acc aga
ccc gcc acc tcc ggg aaa tgg ggc tcg cag gag gac tcc tgg 753 ttt aaa
aag ctt gcc gcc acc atg cag cgc gtg aac atg atc atg gca g 754 ttt
aaa gga tcc gga acc tcc ccc gcc tga tcc ccc gcc acc aga ccc gcc acc
tcc agt gag ctt tgt ttt ttc ctt aat cca gtt gac ata 1055 aaa ttt
gga tcc gat gtt gtg atg acc caa act cca ctc tcc 1056 aaa ttt gaa
ttc cta aca ctc tcc cct gtt gaa gct ctt tgt 1095
Aaatgatttgccctcccatatgtccttc 1236 aaa ttt ggatcc cag gtc ca ctg ca
ca tct gga gct
TABLE-US-00008 TABLE 5 Overview of plasmid combination underlying
the expression of protein ID 0061 (SEQ40 + 41), 0023 (SEQ34 + 35),
0051 (SEQ36 + 37), 0062 (SEQ42 + 39), 0084 (SEQ171 + SEQ167), 0074
(SEQ176 + 177), 0003 (SEQ175 + 174), 0004 (SEQ178 + 179), 0135
(SEQ169 + SEQ173), 0145 (SEQ32 + 173) and protein ID 5001 (SEQ180 +
39). Protein ID LC plasmid HC plasmid Protein name 0061
pTT-0012LC.C36A pTT-0012HC.T60N antiTLT-1 0061mab:
(0012HC.T60N.sub.)2; (0012LC.C36A).sub.2 0023 pTT-0023LC pTT-0023HC
antiTLT-1 0023mab: (0023HC).sub.2; (0023LC).sub.2 0051 pTT-0051LC
pTT-0051HC antiTLT-1 0051mab: (0051HC).sub.2; (0051LC).sub.2 0062
pTT-0052LC pTT-0052HC.C91Y antiTLT-1 0062mab: (0052HC.C91Y).sub.2;
(0052LC).sub.2 0084 pTT-0012LC.C36A- pTT-0012VH.T60N- antiTLT-1
0084Fab-YGPPC: HPC4 YGPPC (0012VH.T60N-CH1- YGPPC);
(0012LC.C36A-HPC4) 0074 pTT-0051LC-HPC4 pTT-0051VH-CH1- antiTLT-1
0074Fab-YGPPC: YGPPC (0051LC-HPC4); (0051VH-CH1-YGPPC) 0003
pTT-0052LC-HPC4 pTT-0052VH.C91Y- antiTLT-1 0003Fab-YGPPC CH1-YGPPC
(0052LC-HPC4); (0052VH.C91Y-CH1- YGPPC) 0004 pTT-0023LC-HPC4
pTT-0023VH-CH1- antiTLT-1 0004Fab-YGPPC YGPPC (0023LC-HPC4);
(0023VH-CH1-YGPPC) 0135 pTT-FIX-L4b- pTT-0012VH-CH1- FIX-antiTLT-1
Fab: 0012LC HPC4 (FIX-L4b-0012LC); (0012VH-CH1-HPC4) 0145
pTT-FIX-L4b- pTT-0012HC FIX-antiTLT-1 mAb: 0012LC
(FIX-L4b-0012LC).sub.2; (0012HC).sub.2 5001 pTT-0052LC
pTT-FVII-L4b- FVII-antiTLT-1 Fab: 0052V.sub.H.C91Y-CH1- (0052LC);
(FVII-L4b-0052V.sub.H.C91Y-CH1- HPC4 HPC4)
Example 15
Purification and Characterization of Recombinantly Expressed
Anti-TLT-1 Fabs (Fab0084, Fab0074, Fab0003 and Fab0004)
[0586] Purification of the anti-TLT-1 Fabs (0084, 0074, 0003 and
0004) was conducted using affinity chromatography based on the
resin kappaSelect (GE Healthcare, cat. no. 17-5458-01). The four
Fabs contain a single free cysteine residue, each included in the
sequence. The purification was conducted using an AktaExplorer
chromatography system (GE Healthcare, cat. no. 18-1112-41). The
buffer systems used for the purification step was an
equilibration/wash buffer composed of 10 mM NaPhosphate, pH 7.5,
150 mM NaCl and an elution buffer composed of 20 mM Formic acid, pH
3.0. No adjustments of the cleared cell supernatant were conducted
prior to application on a pre-equilibrated column packed with the
kappaSelect resin. The column was washed with 5 column volumes of
equilibration/wash buffer. The protein was eluted isocratically in
approximately 4 column volumes of elution buffer. The eluate was
adjusted to pH 7 using 0.5 M NaPhosphate, pH 9.0. The molecular
mass of the eluted protein was analysed using SDS-PAGE/Coomassie
NuPage 4-12% Bis-Tris gels (Invitrogen, cat. no. NP0321BOX) and
Liquid Chromatography Electrospray Ionisation Time-of-Flight Mass
Spectrometry method setup on an Agilent 6210 instrument and a
desalting column MassPREP (Waters, cat. no. USRM10008656). A pure
and homogenous protein with an expected molecular mass was
observed. A size-exclusion high-performance liquid chromatographic
(SEC-HPLC) analysis setup on an Agilent LC 1100/1200 system and
using a BIOSep-SEC-S3000 300.times.7.8 mm column (Phenomenex, cat.
no. 00H-2146-K0) and a running buffer composed of 200 mM
NaPhosphate pH 6.9, 300 mM NaCl and 10% isopropanol was also
conducted. Here, the protein eluted as a single symmetric peak at a
retention time of approximately 9.1 min at a flow rate of 1 ml/min.
To measure final protein concentration, a NanoDrop
spectrophotometer (Thermo Scientific) was used together with an
extinction coefficient of 1.29.
Example 16
Purification and Characterization of Recombinantly Expressed
FIX-anti-TLT-1 Fab Fusion Protein (FIX-Fab0135)
[0587] Purification of FIX-Fab0135 was conducted using an affinity
chromatography method based on an anti-HPC4 resin (Roche, cat. no.
11815024001). The purification was conducted using an AktaExplorer
chromatography system (GE Healthcare, cat. no. 18-1112-41). The
buffer systems used for the purification step was an equilibration
buffer composed of 20 mM Hepes, pH 7.5, 1.0 mM CaCl.sub.2, 100 mM
NaCl and 0.005% (v/v) Tween-80, a wash buffer composed of 20 mM
Hepes, pH 7.5, 1.0 mM CaCl.sub.2, 1.0 M NaCl and 0.005% (v/v)
Tween-80, and an elution buffer composed of 20 mM Hepes, pH 7.5,
5.0 mM EDTA and 100 mM NaCl. Cell supernatants were adjusted with 1
mM CaCl.sub.2 final concentration and a pH of 7.5 and applied onto
a pre-equilibrated anti-HPC4 column. The column was washed with 5
column volumes of equilibration buffer, 5 column volumes of wash
buffer and last with 5 column volumes of equilibration buffer. The
protein was eluted isocratically in approximately 4 column volumes
of elution buffer. The protein was analyzed using
SDS-PAGE/Coomassie and Matrix Assisted Laser Desorption Ionisation
Time-of-Flight Mass Spectrometry (MALDI-TOF MS) setup on a
Micro-flex system (Bruker Daltonics), showing that a pure and
homogenous protein with a molecular mass of 106 kDa was obtained.
Since the theoretical mass of the amino acid sequence for the
FIX-Fab0135 construct was 95.9 kDa, the expressed protein contained
post-translational modifications. To measure the final protein
concentrations, a NanoDrop spectrophotometer (Thermo Scientific)
was used together with extinction coefficient of 1.29.
Example 17
pcDNA3.1(+)-hTLT-1 ECD-HPC4 ala Mutant Plasmids
[0588] Forty hTLT-1 ECD-HPC4 Ala mutant expression constructs were
designed according to Table 6. The expression constructs were
developed by external contractor GENEART AG (Im Gewerbepark B35,
93059 Regensburg, Germany) and all 40 expression constructs were
made based on the expression vector designated pcDNA3.1(+).
Aliquots of DNA for each of the 40 hTLT-1 ECD-HPC4 pcDNA3.1(+)
expression construct were transfected into HEK293-6E suspension
cells in order to transiently express each hTLT-1 ECD-HPC4 Ala
mutant protein (Table 6). Transient transfection and culturing of
HEK293-6E cells were performed as described in example 14.
TABLE-US-00009 TABLE 6 wt Wild-type 1 L22A 2 V25A 3 Q27A 4 V30A 5
L35A 6 H39A 7 R41A 8 L42A 9 Q43A 10 K46A 11 Q48A 12 F54A 13 L55A 14
P56A 15 E57A 16 Q60A 17 D68A 18 R69A 19 R70A 20 R75A 21 L82A 22
L86A 23 E90A 24 M91A 25 T93A 26 Q95A 27 E96A 28 E97A 29 D107A 30
R110A 31 H116A 32 R117A 33 S119A 34 P125A 35 E126A 36 E128A 37
E130A 38 S136A 39 N140A 40 K159A
Example 18
Purification and Characterisation of Monoclonal Anti-TLT-1
Antibodies (mAb0012, mAb0023, mAb0051, mAb0061, mAb0062)
[0589] Purification of the recombinantly expressed monoclonal
anti-TLT-1 antibodies described in Table 5 was conducted by a
2-step process composed of affinity chromatography using a Protein
A MabSelect SuRe resin (GE Healthcare, cat. no. 17-5438-01) and gel
filtration chromatography using a 26/60 Superdex 200 PrepGrade
column (GE Healthcare, cat no. 17-1071-01). Purifications were
conducted using an AktaExplorer chromatography system (GE
Healthcare, cat. no. 18-1112-41). The buffer systems used for the
affinity purification step was an equilibration buffer composed of
20 mM NaPhosphate pH 7.2, 150 mM NaCl, an elution buffer composed
of 10 mM Formic acid pH 3.5 and an pH-adjustment buffer composed of
0.5 M NaPhosphate pH 9.0. Cell supernatants were applied directly
without any adjustments onto a pre-equilibrated MabSelect SuRe
column. The column was washed with 15 column volumes of
equilibration buffer and the monoclonal antibodies were eluted
isocratically in approximately 2-5 column volume of elution buffer.
The pooled fractions were adjusted to neutral pH using the
described pH-adjustment buffer immediately after elution. The
protein was further purified and buffer exchanged using said gel
filtration column. The running buffer used for size exclusion
chromatography was a 25 mM His pH 6.5, 135 mM NaCl. The flow rate
used was 2.5 ml/min and the monoclonal anti-TLT-1 antibodies eluted
as single peaks at approximately 0.4 column volumes. Based on
analyses of fractions over the entire peak using the previously
described SEC-HPLC method (as described in example 2), pools were
prepared which contained pure antibody protein eluting as symmetric
peaks at approximately 8.5 min. and with a minimum content of
earlier eluting high-molecular weight protein.
[0590] The purified antibodies were characterized using the
previously described SDSPAGE/Coomassie (as described in example 2)
and SEC-HPLC methods, showing that all antibody protein
preparations produced were highly homogenous. All antibodies
displayed expected heavy chain components of approximately 50 kDa
and light chain components of approximately 25 kDa when using
reducing conditions prior to running the SDS-PAGE/Coomassie
analyses. Intact molecular mass determinations were performed using
a Liquid Chromatography Electrospray Ionisation Time-of-Flight Mass
Spectrometry method setup on an Agilent 6210 instrument and a
desalting column MassPREP (Waters, cat. no. USRM10008656). The
buffer system used was an equilibration buffer composed of 0.1%
Formic acid in LC-MS graded-H.sub.2O and an elution buffer composed
of 0.1% Formic acid in LC-MS graded-ACN. All antibodies displayed
intact molecular masses of 147.2-148.6 kDa, which is approximately
2.7-3.1 kDa above the theoretical masses of the amino acid
sequences for each of the antibodies. Thus, all the recombinantly
expressed anti-TLT-1 antibodies displayed post-translational
modifications corresponding to expected HC N-glycosylations. Final
purities of 95-99% were obtained for the six antibodies. To verify
the N-terminal sequence of the cloned and purified anti-TLT-1
antibodies, EDMAN degradations were performed using an automated
sequenator system (Applied Biosystems 494 Protein Sequencer). 10-20
degradation cycles were conducted for each antibody. Here, expected
light and heavy chain sequences were confirmed for the six cloned
anti-TLT-1 antibodies. To measure the final protein concentrations,
a NanoDrop spectrophotometer (Thermo Scientific) was used together
with specific extinction coefficients for each of the six
antibodies ranging from 1.34-1.51.
Example 19
mAb Binding and Competition of Different mABs for Binding to
TLT-1
Materials:
TABLE-US-00010 [0591] TABLE 7 Reagents Reagent Source TLT-1-His
Example 1 mAb0061 Example 18 mAb0023 Example 18 mAb0051 Example 18
mAb0062 Example 18 Fab0074 Example 15 Fab0084 Example 15 Fab0003
Example 15 Fab0004 Example 15 All other reagents Biacore Human
Antibody Capture Kit (BR-1008-39) Anti-His mAb (R&D #
MAB050)
[0592] Method:
[0593] The mAbs of interest were either immobilized directly to a
CM5 chip or by capture via a human Fc capture mAb immobilized to a
CM5 chip, while TLT-1-His was immobilized by capture via an
anti-His mAb CM5 chip for analysis of Fabs. Reagents that were used
are shown in Table 7.
[0594] mAb Direct Capture:
[0595] The TLT-1 mAbs were immobilised to a level of approx
500-1000 RU on a CM5 chip (50 .mu.g/ml diluted in Na-acetate, pH
4.0) using the standard procedure recommended by the supplier.
Two-fold dilutions of TLT-1 from 200 nM to 0.2 nM were tested for
binding to the mAbs. Running and dilution buffer: 10 mM HEPES, 150
mM, 0.005% p20, pH 7.4. Regeneration was obtained by 10 mM Glycine,
pH 1.7. mAb capture via human Fc mAb: Human Fc mAb was immobilised
to approx 10.000 RU. The mAb of interest was added (approx 100 nM).
Two-fold dilutions of TLT-1 from 200 nM to 0.2 nM were tested.
Running and dilution buffer: 10 mM HEPES, 150 mM, 0.005% p20, pH
7.4. Regeneration was obtained in 3 M MgCl.sub.2.
[0596] TLT-1-His Capture Via Anti-his mAb (R&D #MAB050):
[0597] The anti-His mAb was immobilised to approx 9.000 RU. The
TLT-1-His was added to a level of approx 30-40 RU (10 .mu.g/ml
diluted in 10 mM Hepes, 150 mM NaCl, 3 mM EDTA, 0.005% Tween-20)
using the standard procedure recommended by the supplier. 8-fold
dilutions of Fabs from 3 to 0.047 .mu.g/ml were tested for binding
to the TLT-1-His. Running and dilution buffer: 10 mM Hepes, 150 mM
NaCl, 3 mM EDTA, 0.005% Tween-20. Regeneration was obtained by 3 M
MgCl.sub.2.
[0598] Determination of kinetic and binding constants (k.sub.on,
k.sub.off, K.sub.D) was obtained assuming a 1:1 interaction of
TLT-1 and fibrinogen using the Biacore T100 evaluation
software.
[0599] Competition:
[0600] Competitional binding interaction analysis was obtained by
Surface Plasmon Resonance in a Biacore T-100 analysing binding of
various TLT-1 mAbs to TLT-1 when bound to immobilised mAb0012 (or
an alternative mAb). Direct immobilization to a CM5 chip of the
mAbs to a level of 5000-10000 RU was achieved in 10 mM sodium
acetate pH 4.5-5.0. This was followed by binding of 50 nM TLT-1 and
after 2 min of dissociation followed by binding of the three other
mAbs to be tested for competition. Running and dilution buffer: 10
mM HEPES, 150 mM, 0.005% p20, pH 7.4. Regeneration was obtained by
10 mM Glycine, pH 1.7.
Results:
TABLE-US-00011 [0601] TABLE 8 Biacore TLT-1 binding ka (1/M) kd
(1/s) K.sub.D (M) TLT-1 technique mAb0061 9.32E+05 0.003499
3.75E-09 capture mAb0023 2.87E+05 0.00125 4.36E-09 direct mAb0051
2.45E+05 0.00472 19.3E-09 direct mAb0062 3.26E+05 0.00134 4.12E-09
direct Fab0074 3.35E+06 0.00798 2.38E-09 capture Fab0084 5.31E+06
0.00524 0.99E-09 capture Fab0003 5.36E+05 0.00279 5.20E-09 capture
Fab0004 1.15E+06 0.00195 1.70E-09 capture
TABLE-US-00012 TABLE 9 SPR analysis. Binding constant for binding
to TLT-1. Competition with mAb0012 Competition Competition with
with Competition Competition mAb ID mAb0012 mAb0023 with mAb0051
with mAb0062 mAb0061 Yes No no no mAb0023 Yes no yes mAb0051 yes no
mAb0062 yes
Conclusion:
[0602] Binding constants for mAb0061, mAb0023, mAb0051 and mAb0062
and Fab0074, Fab0084, Fab0003 and Fab0004 were estimated by Biacore
analysis (see Table 8). mAb0061 and mAb0051 do not compete with any
of the other mAbs for binding (see Table 9). mAb0023 and mAb0062 do
compete with each other (see Table 9).
Example 20
Preparation of 20:80 PS:PC Vesicles and Cloning, Expression,
Refolding and Relipidation of TLT-1
[0603] Relipidated TLT-1 in 20:80 PS:PC vesicles were prepared
using Triton X-100 as detergent as described in Smith and Morrissey
(2005) J. Thromb. Haemost., 2, 1155-1162 except that TLT-1 was used
instead of TF.
Materials
[0604] LB medium Kanamycin (50 mg/ml). Kanamycin Sigma K-0254
1000 mM IPTG (IPTG Sigma 1-6758)
[0605] Lysis buffer: 1.times. Bugbuster (Novagen) in 50 mM
Tris-HCl, 100 mM NaCl, 2 mM EDTA, pH 8.0. Add 0.5 mg/ml
lysozyme+DNAseI. Add 1.times. Complete Inhibitor Cocktail (Roche)
IB-Wash buffer 1: 1:10 bugbuster in IB-buffer. Add 501 .mu.g/ml
lysozyme+0.5.times. Complete Inhibitor Coctail (Roche) IB-Wash
buffer 2: 1:10 Bugbuster in IB-buffer
IB-Buffer: 50 mM Tris-HCl, 100 mM NaCl, 2 mM EDTA, pH 8.0
[0606] GndHCl buffer: 6M Guanidinium HCl, 50 mM Tris-HCl, 50 mM
NaCl, 0.1% Triton X-100 red., pH 8.0 Refolding buffer: 50 mM
Tris-HCl, 800 mM Arginine, 0.1% Triton X-100, 5 mM reduced
glutathione, 0.5 mM oxidized glutathione pH 8.5 Dialysis buffer: 20
mM Tris-HCl, 0.1% Triton X-100, pH 8.0 DTT:Reduced glutathione
(Sigma G4251) Oxidized glutathione Sigma G4376 PC: 10 mg/ml
L-.alpha.-phosphatidylcholine (Egg, chicken) in chloroform (Avanti
Polar Lipids Inc.) Catalog No. 840051C. Mw 760.09 PS: 10 mg/ml
L-.alpha.-phosphatidylserine sodium salt (Brain, porcine) in
chloroform. (Avanti Polar Lipids Inc.) Catalog No. 840032C. Mw
812.05 Triton X-100: 10% Triton X-100, hydrogenated, protein grade
detergent, sterile filtered. Calbiochem. Catalog No. 648464
Concentration 159 mM (Mw 628) HBS buffer: 50 mM HEPES, 100 mM NaCl,
pH 7.4 Bio-Beads: Bio-Beads SM2 Adsorbent, 20-50 mesh BioRad
Laboratories, Catalog No. 152-3920.
Method
[0607] Expression: TLT-1 (hTLT-1.18-188; SEQ ID NO: 149) including
extracellular domain, linker and transmembrane domain was cloned
into pET24a using primers 1004 (SEQ ID NO: 150) and 1005 (SEQ ID
NO: 151) and pTT-hTLT-1 as template. Standard techniques for DNA
preparation were employed. Transformation was performed into BL21
(DE3).
Overnight Culture:
[0608] 1.times.50 ml LB medium in 250 ml flasks (plastic) and 50
.mu.l of 50 mg/ml Kanamycin+1 coloni (transformation) from BL21
plate were mixed. The culture was incubated ON at 37.degree. C.,
220 rpm. Starter-culture: 2.times.500 ml LB medium in 2 L flasks
(plastic) with 300 .mu.l of 50 mg/ml Kanamycin was added. 10 ml ON
culture TLT-1 lip/pET24a in BL21 (DE3) was added and OD.sub.600
followed. Incubated at 37.degree. C., 220 rpm. Induction:
2.times.500 ml with TLT-1 lip/pET24a.about.BL21 (DE3) in LB.
25.degree. C..about.0.2 mM IPTG was added (100 .mu.l of 1M) to the
cell culture when OD.sub.600 reached between 0.6-0.8. This was
incubated for 3 h at 25.degree. C., 220 rpm. The culture was
harvested after 3 h and centrifuged for 30 min at 4600 rpm. The
supernatant was discarded. The pellet was stored at -20.degree. C.
Lysis of Inclusion bodies: The E. coli pellet was resuspended in 5
ml lysis buffer/g pellet. MgSO.sub.4 was added to 5 mM to support
DNAseI activity. Cell suspension was incubated on shaking platform
for 20 min at room temperature. The lysate was cleared by
centrifugation 20000 g (8500 rpm) for 20 min at 4.degree. C. The
pellet was resuspended in 100 ml IB-Wash buffer. Suspension was
mixed by gentle vortexing and incubated at RT for 5 min. Suspension
was centrifuged at 20000 g for 20 min at 4.degree. C. to collect
inclusion bodies. Inclusion bodies were resuspended in 100 ml
IB-Wash buffer 2. Sample was centrifuged at 20000 g for 20 min at
4.degree. C. to collect inclusion bodies. The pellet was
resuspended in 100 ml water and centrifuged at 20000 g for 20 min
at 4.degree. C. to collect inclusion bodies. Refolding: The pellet
was resolubilised in x ml GdnHCl buffer (20 ml). The final
concentration of TLT-1 (A280 was measured) was 1-2 mg/ml. DTT (400
.mu.l) was added to final concentration of 20 mM. Complete
solubilization was ensured by magnetic stirring for .about.1-2.5
hrs (1.5 h) at RT. Insolube material was removed by centrifugation
at 20000 g for 20 min. A peristaltic pump was used slowly
(overnight) to transfer the GdnHCl/protein solution (20 ml) to
>20.times. Refolding buffer (400 ml) at 4.degree. C. The
refolding buffer was stirred quickly to ensure rapid dilution. Pump
run was obtained at Flow rate 1.times., speed 2.5, 4.degree. C. and
left overnight at 4.degree. C. Precipitated protein was removed by
centrifugation at 20000 g (8500 rpm) in 50 ml tubes for 30 min. The
TLT-1 lip was concentrated from 400 ml to 120 ml in Amico-filter 76
mm dia., 10.000 MWCO at 4.5 bar. The protein was checked on an
SDS-Page by EtOH-precipitation because of the GdnHCl in the sample.
2.times.500 .mu.l and 2.times.25 .mu.l were concentrated in 0.5 ml
tubes with 10.000 MWCO. 50 .mu.l sample+9 vol. ice-cold 99% EtOH
(450 .mu.l) was mixed and placed at -20.degree. C. for 10 min. The
sample wa centrifuged at full speed 13.000 rpm for 5 min. The
supernatant was discarded. The pellet was washed with 450 .mu.l
ice-cold 96% EtOH+50 .mu.l MQ. Centrifuge again. Let dry (EtOH must
be eliminated before SDS-PAGE). 100 .mu.l was resuspended 1.times.
sample buffer
[0609] PS:PC Preparation And Relipidation:
[0610] The exact protocol described in Smith S A & Morrissey J
H (2004) "Rapid and efficient incorporation of tissue factor into
liposomes". J. Thromb. Haemost. 2:1155-1162 was followed for
relipidation of TLT-1.
Example 21
Analysis of Fibrinogen Binding to TLT-1 and Binding Competition
Between TLT-1 mAbs and Fibrinogen
[0611] TLT-1 binds fibrinogen as tested by SPR analysis.
Furthermore, simultaneous binding of fibrinogen and each of the
four mAbs: mAb0012, mAb0023, mAb0051 and mAb0062 was tested by SPR
analysis in a Biacore T100 instrument.
[0612] Materials used are shown in Table 10.
TABLE-US-00013 TABLE 10 Reagent Source TLT-1 Example 2 mAb0012
Example 18 mAb0023 Example 18 mAb0051 Example 18 mAb0062 Example 18
Fibrinogen HCI-0150R Haematologic technologies All other reagents
Biacore GE Healthcare
[0613] Method:
[0614] Human TLT-1 was immobilised to a level of approx 1000 RU on
a CM5 chip (50 .mu.g/ml diluted in Na-acetate, pH 4.0) using the
standard procedure recommended by the supplier. Four-fold dilutions
of human fibrinogen from 200 nM to 0.2 nM were tested for binding
to the immobilized TLT-1. Running and dilution buffer: 10 mM HEPES,
150 mM, 0.005% p20, pH 7.4. Regeneration was obtained by 10 mM
Glycine, pH 1.7. Determination of kinetic and binding constants
(k.sub.on, k.sub.off, K.sub.D) was obtained assuming a 1:1
interaction of TLT-1 and fibrinogen using the Biacore T100
evaluation software (Table 11).
[0615] Competition of the different mAbs for binding to TLT-1 and
fibrinogen simultaneously was tested by immobilisation of each of
the mAbs to approximately 10000-15000 RU at a CM5 chip followed by
binding of 50 nM TLT-1 followed after 2-3 min dissociation by
varying concentrations of the mAbs to be tested for competition.
Regeneration of the chip was obtained by 10 mM Glycine, pH 1.7
(Table 12).
[0616] Results:
TABLE-US-00014 TABLE 11 TLT-1 binding to fibrinogen ka (1/M) kd
(1/s) K.sub.D (M) TLT-1-fibrinogen 4171 3.92 .times. 10.sup.-4
9.40E-08 Binding
TABLE-US-00015 TABLE 12 Competition with fibrinogen. The mAb of
interest was immobilised to a chip. Addition of TLT-1 was followed
by fibrinogen (a sandwich). Competition with mAb ID fibrinogen
mAb0012 no mAb0023 yes mAb0051 no mAb0062 yes
[0617] Conclusion:
[0618] TLT-1 (HCI-0150R) binds fibrinogen. mAb0023 and mAb0062
compete with this binding site. mAb0012 and mAb0051 do not
compete.
Example 22
Epitope Mapping by Hydrogen Exchange Mass Spectrometry (HX-MS)
[0619] The HX-MS technique has been employed to identify the TLT-1
binding epitopes covered by the four monoclonal antibodies mAb0023,
mAb0051, mAb0062 and mAb0061.
[0620] For the mapping experiments hTLT-1.20-125, hTLT-1.16-162 and
hTLT-1.126-162 corresponding to SEQ ID NO 5, 6 and 7, respectively,
were used. All proteins were buffer exchanged into PBS pH 7.4
before experiments.
Method: HX-MS Experiments.
[0621] Instrumentation and Data Recording.
[0622] The HX experiments were automated by a Leap robot (H/D-x
PAL; Leap Technologies Inc.) operated by the LeapShell software
(Leap Technologies Inc.), which performed initiation of the
deuterium exchange reaction, reaction time control, quench
reaction, injection onto the UPLC system and digestion time
control. The Leap robot was equipped with two temperature
controlled stacks maintained at 20.degree. C. for buffer storage
and HX reactions and maintained at 2.degree. C. for storage of
protein and quench solution, respectively. The Leap robot
furthermore contained a cooled Trio VS unit (Leap Technologies
Inc.) holding the pepsin-, pre- and analytical columns, and the LC
tubing and switching valves at 1.degree. C. The switching valves
have been upgraded from HPLC to Microbore UHPLC switch valves
(Cheminert, VICI AG). For the inline pepsin digestion, 100 .mu.L
quenched sample containing 200 pmol TLT-1 was loaded and passed
over a Poroszyme.RTM. Immobilized Pepsin Cartridge (2.1.times.30 mm
(Applied Biosystems)) using a isocratic flow rate of 200 .mu.L/min
(0.1% formic acid:CH3CN 95:5). The resulting peptides were trapped
and desalted on a VanGuard pre-column BEH C18 1.7 .mu.m
(2.1.times.5 mm (Waters Inc.)). Subsequently, the valves were
switched to place the pre-column inline with the analytical column,
UPLC-BEH C18 1.7 .mu.m (2.1.times.100 mm (Waters Inc.)), and the
peptides separated using a 9 min gradient of 15-40% B delivered at
150 .mu.L/min from an AQUITY UPLC system (Waters Inc.). The mobile
phases consisted of A: 0.1% formic acid and B: 0.1% formic acid in
CH3CN. The ESI MS data, and the separate data dependent MS/MS
acquisitions (CID) and elevated energy (MS.sup.E) experiments were
acquired in positive ion mode using a Q-T of Premier MS (Waters
Inc.). Leucine-enkephalin was used as the lock mass ([M+H].sup.+
ion at m/z 556.2771) and data was collected in continuum mode.
[0623] Data Analysis.
[0624] Peptic peptides were identified in separate experiments
using standard CID MS/MS or MS.sup.E methods (Waters Inc.).
MS.sup.E data were processed using BiopharmaLynx 1.2 (version 017).
CID data-dependent MS/MS acquisition was analyzed using the
MassLynx software and in-house MASCOT database.
[0625] HX-MS raw data files were subjected to continuous
lockmass-correction. Data analysis, i.e., centroid determination of
deuterated peptides and plotting of in-exchange curves, was
performed using HX-Express ((Version Beta); Weis et al., J. Am.
Soc. Mass Spectrom. 17, 1700 (2006)).
[0626] Epitope mapping of mAb0023: Amide hydrogen/deuterium
exchange (HX) was initiated by a 30-fold dilution of hTLT-1.20-125
in the presence or absence of mAb0023 into the corresponding
deuterated buffer (i.e. PBS prepared in D.sub.2O, 96% D.sub.2O
final, pH 7.4 (uncorrected value)). All HX reactions were carried
out at 20.degree. C. and contained 4 .mu.M hTLT-1.20-125 in the
absence or presence of 2.4 .mu.M mAb0023 thus giving a 1.2 fold
molar excess of mAb binding sites. At appropriate time intervals
ranging from 10 sec to 8 hours, aliquots of the HX reaction were
quenched by an equal volume of ice-cold quenching buffer (1.35M
TCEP) resulting in a final pH of 2.6 (uncorrected value).
[0627] Epitope Mapping of mAbs 0051 and 0062:
[0628] Epitope mapping of mAb0051 and mAb0062 were performed in a
separate experiment using hTLT-1.20-125 and carried out similarly
to the mapping of mAb0023 as described above.
[0629] Epitope Mapping of mAb0061:
[0630] Epitope mapping of mAb0061 was performed in two separate
experiments using either the hTLT-1.16-162 protein or the
hTLT-1.126-162 peptide.
[0631] Experiments were performed similarly as described above for
mAb0023. However, the pepsin column was placed at room temperature
for experiments using hTLT-1.126-162. This results in an increased
pepsin digestion efficacy with minimal additional exchange
loss.
Results
[0632] Epitope Mapping of mAb0023
[0633] The HX time-course of 20 peptides, covering 100% of the
primary sequence of TLT-1, were monitored in the presence and
absence mAb0023 for 10 sec to 8 hours.
[0634] The observed exchange pattern in the presence or absence of
mAb0023 can be divided into two different groups: One group of
TLT-1 peptides display an exchange pattern that is unaffected by
the binding of mAb0023 and another group of TLT-1 peptides that
show protection from exchange upon mAb0023 binding. The regions
displaying protection upon mAb0023 binding encompass peptides
covering TLT-1 residues 36-51, 79-91 and 105-120. By comparing the
relative amounts of exchange protection within each peptide the
epitope for mAb0023 can be narrowed to residues 36-47, VQCHYRLQDVKA
(50%), 82-87, LGGGLL (30%), 108-115, GARGPQIL (20%) with the
relative exchange protection for each segment noted in parenthesis.
An overview of the peptide map for the 0023 epitope is shown in
FIG. 6.
Epitope Mapping of mAb0051
[0635] The HX time-course of 22 peptides, covering 100% of the
primary sequence of TLT-1, were monitored in the presence and
absence mAb0051 for 10 sec to 1000 sec.
[0636] The observed exchange pattern in the presence or absence of
mAb0051 can be divided into two different groups: one group of
TLT-1 peptides display an exchange pattern that is unaffected by
the binding of mAb0051 and a group that is affected. The regions
displaying protection upon mAb0051 binding encompass peptides
covering residues 52-66, 92-120. By comparing the relative amounts
of exchange protection within each peptide the epitope for mAb0051
can be narrowed to residues 55-66, LPEGCQPLVSSA (75%) and 110-120,
RGPQILHRVSL (25%) as well as a weak interaction in the 92-105
stretch. An overview of the peptide map for the 0051 epitope is
shown in FIG. 7.
Epitope Mapping of mAb0062
[0637] The HX time-course of 22 peptides, covering 100% of the
primary sequence of TLT-1, were monitored in the presence and
absence mAb0062 for 10 sec to 1000 sec.
[0638] The observed exchange pattern in the presence or absence of
mAb0062 can be divided into two different groups: One group of
TLT-1 peptides display an exchange pattern that is unaffected by
the binding of mAb0062 and another group of TLT-1 peptides that
show protection. The regions displaying protection upon mAb0062
binding encompass peptides covering residues 36-51 and 105-120. By
comparing the relative amounts of exchange protection within each
peptide the epitope for mAb0062 can be narrowed to 36-47,
VQCHYRLQDVKA (60%) and 110-120, RGPQILHRVSL (40%). An overview of
the peptide map for the 0062 epitope is shown in FIG. 8.
Epitope Mapping of mAb0061
[0639] The epitope for mAb0061 was mapped in two separate
experiments using either the hTLT-1.16-162 protein or the
hTLT-1.126-162.
[0640] For hTLT-1.16-162 the HX time-course of 19 peptides,
covering 85% of the primary sequence of TLT-1, were monitored in
the presence and absence mAb0061 for 10 sec to 8 hours. Due to an
O-glycosylation at residue S148, no information could be recorded
beyond residue 141.
[0641] The observed exchange pattern in the presence or absence of
mAb0061 can be divided into two different groups: One group of
TLT-1 peptides display an exchange pattern that is unaffected by
the binding of mAb0061 and another group of TLT-1 peptides that
show protection from exchange upon mAb0061 binding. The regions
displaying protection upon mAb0061 binding encompass peptides
covering residues 121-141. However, it is important to note that no
information is given in this experiment for residue 142 and beyond.
By comparing the relative amounts of exchange protection within
each peptide the epitope for mAb0061 can be narrowed to begin at
residue 130.
[0642] In order to gain full information on the mAb0061 epitope,
the mapping experiment was repeated using the peptide
hTLT-1.126-162. This peptide binds mAb0061 with high affinity and
it is not modified by glycosylation. Thus it should be able to give
HX-MS information for the entire region.
[0643] The HX time-course of 12 peptides, covering the entire
126-162 TLT-1 region were monitored in the presence and absence
mAb0061 for 10 sec to 3000 sec.
[0644] All the peptides in this 126-162 region display protection
from exchange upon mAb0061 binding. By comparing the relative
amounts of exchange protection within each peptide the epitope for
mAb0061 can be narrowed to be within residues 130-145,
ETHKIGSLAENAFSDP. An overview of the peptide map for the 0061
epitope is shown in FIGS. 9 and 10.
Example 23
Production, Characterization and Binding Analyses of hTLT-1
ECD-HPC4 Ala Mutants
[0645] hTLT-1 ECD-HPC4 Alanine mutant constructs were designed
according to Table 6. The expression constructs were developed by
external contractor GENEART AG (Im Gewerbepark B35, 93059
Regensburg, Germany) and all expression constructs were made based
on the expression vector designated pcDNA3.1(+). Aliquots of DNA
for each of the 40 hTLT-1 ECD-HPC4 pcDNA3.1(+) expression contruct
were transfected into HEK293-6E suspension cells in order to
transiently express each hTLT-1 ECD-HPC4 Ala mutant protein (Table
6). Transient transfection and culturing of HEK293 6e cells were
performed as described in example A.
[0646] Seven days post-tranfection, cells were removed by
centrifugation and the resulting hTLT-1 ECD-HPC4 Ala mutant protein
containing supernatants were sterile-filtrated prior to analyses.
The concentration of expressed hTLT-1 ECD-HPC4 Ala mutant protein
in the cleared cell supernatant was determined using a combination
of RP-HPLC and SDS-PAGE/Coomassie analyses. These ranged from 4-40
.mu.g/mL containing variable degree of dimer formation. As
described previously for production of hTLT protein used for
immunization experiments, monomer/dimer forms of the expressed
protein were observed for all hTLT ECD-HPC4 Ala mutant constructs.
The relative concentration of monomer/dimer hTLT-1 ECD-HPC4 protein
was estimated by SDS-PAGE/Coomassie and an average Mw for each
mutant preparation was calculated.
[0647] All binding studies were run at 25.degree. C., and the
samples were stored at 15.degree. C. in the sample compartment on a
ProteOn Analyzer (BioRad) that measures molecular interactions in
real time through surface plasmon resonance. The signal (RU,
response units) reported by the ProteOn is directly correlated to
the mass on the individual sensor chip surface spots.
[0648] Anti-hFc Polyclonal antibody was immobilized onto separate
flow cells of a GLM sensor chip using a 1:1 mixture of 0.4 M EDAC
[1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride] and
0.1 M Sulfo-NHS [N-hydroxysulfosuccinimide]. Each antibody was
diluted in 10 mM sodium acetate pH 5.0 to a concentration of 50
.mu.g/ml, and was immobilized to an individual flow cell at 30
.mu.l/min for 240s. The antibodies were immobilized to flow cells
A1-A6 (horizontal direction). After immobilization, the active
sites on the flow cell were blocked with 1 M ethanolamine. The
final immobilization level of capture antibody typically ranged
from approximately 9,000 to 10,000 RU in one experiment. Capture of
the anti-TLT-1 antibodies mAb0023, mAb0051, mAb0061 and mAb0062 was
conducted by diluting to 0.5 .mu.g/ml into HBS-EP buffer (10 mM
HEPES, 150 mM NaCl, 3 mM EDTA, 0.05% surfactant P20, pH 7.4) and
injected at 30 .mu.l/min for 60s in vertical direction, creating
interspot reference points with only anti-human Fc antibodies. The
final capture level of test antibodies typically ranged from
approximately 200 to 300 RU in one experiment. Binding of wt or Ala
mutant hTLT-1 ECD-HPC4 protein was conducted by injecting over
parallel flow cells in horizontal direction to allow for
comparative analyses of binding to different captured anti-TLT-1
antibodies relative to binding to the interspot references. Each
hTLT-1 ECD-HPC4 protein was diluted to 100 nM, based on the
calculated average Mw, into HBS-EP buffer and injected at 30
.mu.l/min for 240s. The GLM chip was regenerated after each
injection cycle of analyte via one 18s injection of 1 M Formic acid
followed by a 18s injection of 50 mM NaOH at 100 .mu.l/min. This
regeneration step removed the anti-TLT-1 antibody and any bound
TLT-1 from the immobilized capture antibody surface, and allowed
for the subsequent binding of the next test sample pair. The
regeneration procedure did not remove the directly immobilized
anti-human-Fc capture antibody from the chip surface.
[0649] Data analysis was performed using the ProteOn Manager.TM.
Software. No significant non-specific binding to the interspot
control surfaces was observed. Binding curves were processed by
double referencing (subtraction of interspot control surface
signals as well as blank buffer injections over captured anti-TLT-1
antibodies). This allowed correction for instrument noise, bulk
shift and drift during sample injections. Binding signal at 10s
after stop of analyte injection was normalized to level of captured
anti-TLT-1 antibody and presented as binding relative to wt hTLT-1
ECD-HPC4 protein.
[0650] The following Ala mutations displayed a significant decrease
of binding to respective anti-TLT-1 compared to wt hTLT-1 ECD-HPC4
protein. mAb0051: F54A<0.4 wt; M91A<0.2 wt; R117A<0.2 wt;
S119A<0.6 wt. mAb0062: R41A<0.2 wt; L42A<0.6 wt;
Q43A<0.4 wt; F54A<0.6 wt; M91A<0.4 wt; R110A<0.2 wt;
H116A<0.6 wt. mAb0023: L42A<0.2 wt; Q43A<0.2 wt;
K46A<0.2 wt; M91A<0.4 wt; R110A<0.2 wt. Since decreased
binding could be observed for the hTLT-1 ECD-HPC4 mutant M91A for
all 4 anti-TLT-1 antibodies, the residue probably has an important
influence on protein stability rather than being part of an actual
epitope. mAb0061 did not show a decreased binding to any of the
mutated TLT-1 variants tested, indicating that the epitope is not
covered by the mutants introduced in the binding study.
Example 24
Crystal Structure Complexes Between Anti-TLT-1 Fab and TLT-1 Stalk
Peptides
[0651] Expression of anti-TLT-1 Fab, Fab0100 (identical to
Fab0061), for crystallization: The anti-TLT-1 Fab fragment,
Fab0100, comprising the heavy chain corresponding to SEQ ID NO: 152
and the light chain corresponding SEQ ID NO: 153 was expressed
transiently in HEK293 cells according to the generalized
procedure.
[0652] Purification of anti-TLT-1 Fab, Fab0100, for
crystallization: Purification of said Fab was conducted by a
two-step process composed of affinity chromatography using the
kappaSelect resin (GE Healthcare, cat. no. 17-5458-01) and
size-exclusion chromatography. The purification was conducted using
an AktaExplorer chromatography system (GE Healthcare, cat. no.
18-1112-41). The buffer systems used for the purification step was
an equilibration buffer composed of 10 mM NaPhosphate, pH 7.5 and
150 mM NaCl and an elution buffer composed of 20 mM Formic acid, pH
3.0. The supernatant was adjusted with 1 M NaOH to a pH of 7.5 and
applied onto a pre-equilibrated kappaSelect column. The column was
washed with 5 column volumes of equilibration buffer and the Fab
protein was isocratically eluted using approximately 5 column
volumes of elution buffer. The Fab protein was analyzed using
SDSPAGE/Coomassie and LC-MS analyses, showing that a pure and
homogenous protein with an expected molecular weight of 46.9 kDa
was obtained. To measure the protein concentration, a NanoDrop
spectrophotometer (Thermo Scientific) was used together with an
extinction coefficient of 1.31. The final polish of the Fab protein
was conducted using a size-exclusion column (Superdex200).
[0653] Preparation of peptides for crystallization: The TLT-1-stalk
peptide hTLT-1.126-162 (SEQ ID NO: 7) was prepared by solid phase
peptide synthesis. Likewise, a shorter version hTLT-1.129-142 of
the stalk peptide corresponding to SEQ ID NO: 8 was prepared.
[0654] Preparation, crystallization and structure determination of
the Fab0100:TLT-1 complexes: Preparation of Fab0100:hTLT-1.126-162:
The complex between Fab0100 and hTLT-1.126-162 was prepared by
adding two times molar excess of hTLT-1.126-162 to a solution of
Fab0100 followed by isolation of the complex by separating excess
hTLT-1.126-162 using preparative size exclusion chromatography.
Thus, the Fab0100: hTLT-1.126-162 complex was prepared by mixing
Fab (1100 .mu.l, 98 .mu.M) and hTLT-1.126-162 (155 .mu.l, 1391
.mu.M), both in PBS buffer (pH 7.4). The complex was subjected to
gel filtration using a Superdex 200 HighLoad 26/60 (GE Healthcare)
column eluted with PBS-buffer (pH 7.4) at a flow rate of 1 ml/min.
Fractions corresponding to a volume of 3 ml were collected.
Fractions containing the desired Fab0100: hTLT-1.126-162 complex
were pooled and then concentrated using a centrifugal filter device
(Amicon, 10 kDa cut-off) to a protein concentration of 8.6 mg/ml.
This preparation was used for crystallization of the
Fab0100:hTLT-1.126-162 complex.
[0655] Preparation of Fab0100:hTLT-1.129-142: The complex between
Fab0100 and the shorter stalk peptide (hTLT-1.129-142) was
similarly prepared with the exceptions that the molar ratio between
hTLT-1.129-142 and Fab was 1.5:1 and that the gel filtration stop
was omitted due to weaker binding of hTLT-1.129-142 compared to
that of the longer stalk peptide (hTLT-1.126-162).
[0656] Crystallization and data collection of
Fab0100:hTLT-1.129-142 and Fab0100:hTLT-1.126-162 complexes:
Fab0100:hTLT-1.129-142 and Fab0100:hTLT-1.126-162 complexes were at
room temperature crystallized by the sitting drop method.
Fab0100:hTLT-1.129-142 was crystallized by adding to the protein
solution, in a 1:2 volume ratio (precipitant:protein), a
precipitation solution containing 0.04 M potassium dihydrogen
phosphate, 16% w/v PEG 8,000 and 20% glycerol, while the
Fab0100:hTLT-1.126-162 complex was crystallized by adding to the
protein solution, in a 1:1 volume ratio (precipitant:protein), a
precipitation solution containing 20% w/v PEG 10,000 and 0.10 M
Hepes pH 7.5. A crystal of the Fab0100:hTLT-1.129-142 complex was
flash frozen in liquid N.sub.2 and during data collection kept at
100 K by a cryogenic N.sub.2 gas stream. Crystallographic data were
subsequently collected to 2.14 .ANG. resolution using a Rigaku
MicroMax-007 HF rotating anode and a marCCD 165.times.-ray
detector. Space group determination, integration and scaling of the
data were made by the XDS software package (Kabsch, W. (1993) J.
Appl. Crystallogr. 26, 795-800). Cell parameters of the crystal
were determined to be 82.10, 64.99, 107.73 .ANG., 90.degree.,
95.12.degree. and 90.degree., for a, b, c, .alpha., .beta. and
.gamma. respectively, and the space group was determined to be C2.
R.sub.sym for intensities of the data set was calculated to be
6.5%. Coordinates from a Fab model of the PDB-deposited (Berman, H.
M. et al. (2000) Nucleic Acids Res. 28, 235-242) 1NGZ structure
(Yin, J. et al. PNAS us 100, 856-861) was used for structure
determination of the anti-TLT-1 Fab molecule. The 1NGZ Fab model
was divided into two domains, the variable and the constant
domains, which then were used as independent search models in a
Molecular replacement run by the PHASER software program (Mccoy, A.
J. et al. Acta Crystallographica Section D Biological
Crystallography 61, 458-464; Mccoy, A. J. et al. J. Appl.
Crystallogr. 40, 658-674) of the CCP4 suite (Bailey, S. (1994) Acta
Crystallogr. Sect. D-Biol. Crystallogr. 50, 760-763). The ARP-wARP
software package (Evrard, G. X. et al. Acta Crystallographica
Section D 63, 108-117) was subsequently used for automated model
building and phasing. Additional crystallographic refinements,
using the REFMAC5 software program (Murshudov, G. N. et al. Acta
Crystallogr. Sect. D-Biol. Crystallogr. 53, 240-255), followed by
computer graphics inspection of the electron density maps, model
corrections and building, using the COOT software program (Emsley,
P. et al. Acta Crystallogr. Sect. D-Biol. Crystallogr. 60,
2126-2132), were applied. The procedure was cycled until no further
significant improvements could be made to the model. Final
calculated R- and R-free after 3 cycles of manual intervention and
following refinements were 0.185 and 0.245, respectively, and the
model showed a root-mean-square deviation (RMSD) from ideal bond
lengths of 0.022 .ANG..
[0657] A crystal of the Fab0100:hTLT-1.126-162 complex was
transferred to a cryo-solution containing 75% of the precipitant
solution and 25% of glycerol. The crystal was allowed to soak for
about 15 seconds, then flash frozen in liquid N.sub.2 and during
data collection kept at 100 K by a cryogenic N.sub.2 gas stream.
Crystallographic data were subsequently collected to 1.85 .ANG.
resolution at beam-line BL911-3 (Ursby, T. et al. (2004) AIP
Conference Proceedings 705, 1241-1246) at MAX-lab, Lund, Sweden.
Space group determination, integration and scaling of the data were
made in the XDS software package. Cell parameters for the
synchrotron data were determined to be 82.54, 65.32, 108.05 .ANG.,
90.degree., 95.15.degree. and 90.degree., for a, b, c, .alpha.,
.beta. and .gamma., respectively, and space group was determined to
be C2. R.sub.sym for intensities of the data set was calculated to
be 6.7%. The crystal was isomorphous with the
Fab0100:hTLT-1.129-142 crystals and therefore rigid body refinement
of the Fab0100:hTLT-1.129-142 complex was used for the original
phasing of the Fab0100:hTLT-1.126-162 followed by automated model
building and phasing using the ARP-wARP software package.
Additional crystallographic refinements, using the REFMAC5 software
program, followed by computer graphics inspection of the electron
density maps, model corrections and building, using the COOT
software program, were applied. The procedure was cycled until no
further significant improvements could be made to the model. Final
calculated R- and R-free after 13 cycles of manual intervention and
following refinements were 0.171 and 0.223, respectively, and the
model showed a RMSD from ideal bond lengths of 0.027 .ANG. (Table
11).
Results
[0658] As shown in Tables 14 and 15, Anti-TLT-1 effectively binds
to the stalk of TLT-1. Using the software program AREAIMOL, of the
CCP4 program suite, the average areas excluded in pair-wise
interaction between Fab0100 and TLT-1 were calculated to be 764
.ANG..sup.2. The average areas excluded in pair-wise interactions
gave for the Fab0100:hTLT-1.126-162 complexe 656 and 871 A2, for
anti-TLT-1 and TLT-1 respectively.
[0659] Residues in the TLT-1 peptide (hTLT-1.126-162) making direct
contacts to the anti-TLT-1 Fab in the Fab0100: hTLT-1.126-162
complex is defined as the epitope and residues in Fab0100 making
direct contacts to hTLT-1.126-162 in the Fab0100: hTLT-1.126-162
complex is defined as the paratope. Epitope and paratope residues
were identified by running the CONTACTS software of the CCP4
program suite using a cut-off distance of 4.0 .ANG. between the
anti-TLT-1 Fab and the TLT-1 molecule. The results of the contact
calculations for the Fab0100:hTLT-1.126-162 complex of the crystal
structures are shown in Tables 14 and 15. The resulting TLT-1
epitope for Fab0100 was found to comprise the following residues of
SEQ ID NO: 7): Lys 8 (133), Ile 9 (134), Gly 10 (135), Ser 11
(136), Leu 12 (137), Ala 13 (138), Asn 15 (140), Ala 16 (141), Phe
17 (142), Ser 18 (143), Asp 19 (144), Pro 20 (145), Ala 21 (146)
where numbers in parenthesis refer to the corresponding residues in
SEQ ID NO: 2 (Tables 12 and 13).
[0660] The resulting paratope included residues His 31, Asn 33, Tyr
37, His 39, Tyr 54, Phe 60, Ser 96, Thr 97, Val 99 and Tyr 101 of
the Fab0100 light chain corresponding to SEQ ID NO: 153 (Table 12),
and residues Val 2, Phe 27, Arg 31, Tyr 32, Trp 33, Glu 50, Thr 57,
Asn 59, Ser 98, Gly 99, Val 100 and Thr 102 of the Fab0100 heavy
chain corresponding to SEQ ID NO: 152 (Table 13). The TLT-1 epitope
residues involved in hydrogen-binding are also indicated in Tables
12 and 13.
TABLE-US-00016 TABLE 13 Results from the X-ray model refinement to
the observed data of the Fab0100:hTLT-1.126-162 complex by the
software program refmac5. REMARK 3 REFINEMENT. REMARK 3 PROGRAM :
REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV, VAGIN, DODSON REMARK
3 REMARK 3 REFINEMENT TARGET: MAXIMUM LIKELIHOOD REMARK 3 REMARK 3
DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH
(ANGSTROMS): 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS): 34.18
REMARK 3 DATA CUTOFF (SIGMA(F)): NONE REMARK 3 COMPLETENESS FOR
RANGE (%): 99.89 REMARK 3 NUMBER OF REFLECTIONS : 46512 REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION
METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION :
RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.17330 REMARK 3 R
VALUE (WORKING SET): 0.17070 REMARK 3 FREE R VALUE : 0.22260 REMARK
3 FREE R VALUE TEST SET SIZE (%): 5.0 REMARK 3 FREE R VALUE TEST
SET COUNT : 2463 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION
BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN
RESOLUTION RANGE HIGH : 1.850 REMARK 3 BIN RESOLUTION RANGE LOW :
1.898 REMARK 3 REFLECTION IN BIN (WORKING SET): 3409 REMARK 3 BIN
COMPLETENESS (WORKING + TEST) (%): 99.81 REMARK 3 BIN R VALUE
(WORKING SET) : 0.266 REMARK 3 BIN FREE R VALUE SET COUNT : 195
REMARK 3 BIN FREE R VALUE : 0.309 REMARK 3 REMARK 3 NUMBER OF
NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 3993
REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2): NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2): 14.967 REMARK 3 OVERALL
ANISOTROPIC B VALUE. REMARK 3 B11 (A**2): -0.06 REMARK 3 B22
(A**2): 0.23 REMARK 3 B33 (A**2): -0.24 REMARK 3 B12 (A**2): 0.00
REMARK 3 B13 (A**2): -0.36 REMARK 3 B23 (A**2): 0.00 REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON
R VALUE (A): 0.116 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU
FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.165 REMARK 3
REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT
FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939
REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3538; 0.027; 0.022 REMARK
3 BOND ANGLES REFINED ATOMS (DEGREES): 4833; 2.132; 1.958 REMARK 3
TORSION ANGLES, PERIOD 1 (DEGREES): 473; 6.972; 5.000 REMARK 3
TORSION ANGLES, PERIOD 2 (DEGREES): 137; 35.607; 24.453 REMARK 3
TORSION ANGLES, PERIOD 3 (DEGREES): 583; 14.216; 15.000 REMARK 3
TORSION ANGLES, PERIOD 4 (DEGREES): 14; 23.096; 15.000 REMARK 3
CHIRAL-CENTER RESTRAINTS (A**3): 552; 0.180; 0.200 REMARK 3 GENERAL
PLANES REFINED ATOMS (A): 2664; 0.013; 0.021 REMARK 3 REMARK 3
ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3
MAIN-CHAIN BOND REFINED ATOMS (A**2): 2262 ; 1.399 ; 1.500 REMARK 3
MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3679 ; 2.333 ; 2.000 REMARK
3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1276 ; 3.462 ; 3.000 REMARK
3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1139 ; 5.231 ; 4.500
REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF NCS
GROUPS: NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN
DOMAINS: NULL REMARK 3 REMARK 3 REMARK 3 TLS DETAILS REMARK 3
NUMBER OF TLS GROUPS : 2 REMARK 3 ATOM RECORD CONTAINS RESIDUAL B
FACTORS ONLY REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF
COMPONENTS GROUP: 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK
3 RESIDUE RANGE: L 1 L 109 REMARK 3 RESIDUE RANGE: H 1 H 113 REMARK
3 RESIDUE RANGE: P 7 P 21 REMARK 3 ORIGIN FOR THE GROUP (A):
-4.1790 48.4400 34.3450 REMARK 3 T TENSOR REMARK 3 T11: 0.1731 T22:
0.1937 REMARK 3 T33: 0.1093 T12: -0.0155 REMARK 3 T13: -0.0164 T23:
-0.0192 REMARK 3 L TENSOR REMARK 3 L11: 1.9367 L22: 0.4840 REMARK 3
L33: 3.8383 L12: -0.1522 REMARK 3 L13: -1.2215 L23: -0.1172 REMARK
3 S TENSOR REMARK 3 S11: 0.0447 S12: -0.2657 S13: 0.0758 REMARK 3
S21: 0.0958 S22: -0.0414 S23: -0.0674 REMARK 3 S31: 0.0036 S32:
0.0098 S33: -0.0032 REMARK 3 REMARK 3 TLS GROUP: 2 REMARK 3 NUMBER
OF COMPONENTS GROUP: 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE: L 114 L 219 REMARK 3 RESIDUE RANGE: H 116 H
215 REMARK 3 ORIGIN FOR THE GROUP (A): -24.4360 51.7710 5.9920
REMARK 3 T TENSOR REMARK 3 T11: 0.0252 T22: 0.0170 REMARK 3 T33:
0.0735 T12: 0.0161 REMARK 3 T13: 0.0018 T23: 0.0048 REMARK 3 L
TENSOR REMARK 3 L11: 2.0324 L22: 1.6905 REMARK 3 L33: 0.8461 L12:
0.7328 REMARK 3 L13: 0.0695 L23: 0.3337 REMARK 3 S TENSOR REMARK 3
S11: -0.0068 S12: 0.0156 S13: 0.0515 REMARK 3 S21: -0.0127 S22:
-0.0101 S23: 0.1316 REMARK 3 S31: -0.0077 S32: -0.0763 S33: 0.0168
REMARK 3 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD
USED: MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW
PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3
SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS:
REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3
U VALUES : RESIDUAL ONLY REMARK 3 LINKR SG CYS L 139 SG ACYS L 199
SS LINKR SG CYS H 22 SG ACYS H 96 SS LINKR SG ACYS H 141 SG ACYS H
197 SS CISPEP 1 THR L 7 PRO L 8 0.00 CISPEP 2 VAL L 99 PRO L 100
0.00 CISPEP 3 TYR L 145 PRO L 146 0.00 CISPEP 4 PHE H 147 PRO H 148
0.00 CISPEP 5 GLU H 149 PRO H 150 0.00
TABLE-US-00017 TABLE 14 hTLT-1.126-162 "P" (SEQ ID NO 7)
interactions with the Fab0100 light chain (SEQ ID NO: 163). A
cut-off of 4.0 .ANG. was used. The contacts were identified by the
CONTACT computer program of the CCP4 suite. In the last column
"***" indicates a strong possibility for a hydrogen bond at this
contact (distance <3.3 .ANG.) as calculated by CONTACT, "*"
indicates a weak possibility (distance >3.3 .ANG.). Blank
indicates that the program considered there to be no possibility of
a hydrogen bond. Hydrogen-bonds are specific between a donor and an
acceptor, are typically strong, and are easily identifiable.
hTLT-1.126-162 Anti-TLT-1 Res. # Res. # Res. and Atom Res. and Atom
Distance Possibly H- Type Chain name Type Chain name [.ANG.] bond
Ile 9P CB Tyr 101L OH 3.76 Ile 9P CD1 Ser 96L O 3.58 Thr 97L O 3.68
Ile 9P CG2 Val 99L CG2 3.51 Ile 9P C Tyr 101L OH 3.95 Gly 10P N Tyr
101L OH 3.06 *** Gly 10P CA Tyr 101L OH 3.48 Gly 10P C Tyr 101L OH
3.67 Ser 11P N Tyr 101L OH 3.09 *** Ser 11P CB Ser 96L OG 3.89 Tyr
37L CD1 3.94 Ser 96L O 3.37 Ser 11P OG Ser 96L OG 2.88 *** Ser 96L
CA 3.76 Ser 96L CB 3.05 Ser 96L C 3.33 Ser 96L O 2.45 *** Tyr 101L
CE1 3.94 Tyr 101L CZ 3.59 Tyr 101L OH 3.37 * Ser 11P O Tyr 37L CE1
3.39 Tyr 37L CZ 3.66 Tyr 37L OH 3.55 * Leu 12P CG Asn 33L ND2 3.41
Tyr 37L OH 3.86 Leu 12P CD1 His 31L CE1 3.73 His 31L NE2 3.38 His
31L CD2 3.63 Tyr 37L CE2 3.65 Asn 33L ND2 3.68 Tyr 37L CZ 3.84 Tyr
37L OH 3.51 Leu 12P CD2 His 31L CE1 3.57 His 31L NE2 3.91 Asn 33L
ND2 3.39 Phe 17P CB Tyr 54L CG 3.79 Tyr 54L CE1 3.70 Tyr 54L CD1
3.45 Phe 17P CG Tyr 54L CG 3.98 Tyr 54L CD1 3.63 Phe 17P CD1 Tyr
54L CB 3.74 Phe 17P CE1 His 39L ND1 3.88 His 39L CE1 3.32 His 39L
NE2 3.60 Phe 17P CZ His 39L CE1 3.36 His 39L NE2 3.66 Tyr 37L CD1
3.98 Phe 17P CE2 Tyr 37L CD1 3.79 Tyr 37L CE1 3.84 Phe 17P O Phe
60L CD1 3.84 Phe 60L CE1 3.31 Asp 19P N Phe 60L CE1 3.88 Asp 19P CA
Phe 60L CZ 3.80 Asp 19P CB Phe 60L CZ 3.85
TABLE-US-00018 TABLE 15 hTLT-1.126-162 "P" (SEQ ID NO 7)
interactions with Fab0100 heavy chain (SEQ ID NO: 162). A cut-off
of 4.0 .ANG. was used. The contacts were identified by the CONTACT
computer program of the CCP4 suite. In the last column "***"
indicates a strong possibility for a hydrogen bond at this contact
(distance <3.3 .ANG.) as calculated by CONTACT, "*" indicates a
weak possibility (distance >3.3 .ANG.). Blank indicates that the
program considered there to be no possibility of a hydrogen bond.
Hydrogen-bonds are specific between a donor and an acceptor, are
typically strong, and are easily identifiable. hTLT-1.126-162
Anti-TLT-1 Res. # Res. # Res. and Atom Res. and Atom Distance
Possibly H- Type Chain name Type Chain name [.ANG.] bond Lys 8P C
Asn 59H OD1 3.95 Lys 8P O Asn 59H CG 3.69 Asn 59H ND2 3.78 * Trp
33H CH2 3.86 Asn 59H OD1 2.85 *** Thr 57H CG2 3.45 Ile 9P CA Trp
33H CH2 3.91 Glu 50H OE2 3.52 Asn 59H OD1 3.79 Ile 9P CB Glu 50H
OE2 3.81 Ile 9P C Trp 33H CZ3 4.00 Trp 33H CH2 3.65 Glu 50H OE2
3.62 Trp 33H CZ2 3.87 Ile 9P O Trp 33H CZ2 3.92 Gly 10P N Glu 50H
CD 3.40 Glu 50H OE1 3.38 * Trp 33H CZ3 3.55 Trp 33H CH2 3.68 Glu
50H OE2 2.77 *** Trp 33H CE3 3.85 Trp 33H CZ2 3.99 Gly 10P CA Glu
50H CD 3.79 Glu 50H OE1 3.40 Trp 33H CZ3 3.80 Glu 50H OE2 3.61 Trp
33H CE2 3.75 Trp 33H CD2 3.55 Trp 33H CE3 3.58 Trp 33H CZ2 3.99 Gly
10P C Val 100H CG2 3.82 Gly 10P O Val 100H CG2 3.86 Ser 11P N Val
100H CG2 3.78 Ser 11P CA Val 100H CG2 3.78 Ala 13P CB Trp 33H CD1
3.60 Trp 33H NE1 3.52 Asn 15P CG Tyr 32H CD1 3.88 Tyr 32H CE1 3.83
Asn 15P ND2 Arg 31H C 3.94 Arg 31H O 3.09 *** Tyr 32H CG 3.98 Tyr
32H CD1 3.76 Tyr 32H CE1 3.70 Tyr 32H CZ 3.88 Arg 31H NH1 3.93 *
Ala 16P O Val 100H CB 3.86 Val 100H CA 3.80 Val 100H N 2.91 *** Thr
102H CG2 3.46 Gly 99H CA 3.74 Gly 99H C 3.78 Phe 17P CA Thr 102H
CG2 3.64 Phe 17P CD1 Val 100H O 3.93 Phe 17P CE1 Val 100H CB 3.46
Val 100H CG1 3.52 Val 100H O 3.86 Phe 17P CZ Val 100H CB 3.81 Val
100H CG1 3.89 Phe 17P C Thr 102H CG2 3.59 Phe 17P O Thr 102H CG2
3.79 Ser 18P C Thr 102H CG2 3.94 Ser 18P O Thr 102H CB 3.48 Thr
102H OG1 3.64 * Thr 102H CG2 3.26 Pro 20P CA Tyr 32H OH 3.47 Tyr
32H CZ 3.90 Pro 20P CB Val 2H CG2 3.92 Phe 27H CB 3.93 Phe 27H CD1
3.86 Phe 27H CG 3.78 Pro 20P CG Thr 102H OG1 3.88 Ser 98H OG 3.54
Pro 20P CD Thr 102H CB 3.95 Thr 102H OG1 3.83 Pro 20P C Val 2H CG2
3.98 Pro 20P O Phe 27H CB 3.52 Ala 21P N Val 2H CG2 3.51 Ala 21P CA
Val 2H CG2 3.97 Ala 21P CB Val 2H CG2 3.77
Example 25
Epitope Mapping by Peptide Walk
[0661] The peptide walking ELISA defined the minimal binding region
of the peptide. This was established by coating biotinylated
peptides with one residue frameshift in the stalk region of TLT-1
in streptavidin plates followed by binding of the antibody of
interest (mAb0061). A secondary antibody was added for detection
and binding was measured at 450 nm. Positive control: binding to
biotinylated TLT-1.
Materials
[0662] 10.times.PBS: 10.times.GPBS14200 Gibco [0663] Tween20:
Aldrich Cat#27, 434-8, Lot#S30950-315 [0664] Plate: 96-well
Streptavidin coated plate Nunc#466014 [0665] BSA: A7030-100 g
Lot#057K0737 [0666] Blocking/Dilute Buffer: [0667] 1.times.PBS
pH=7.4 [0668] 2% BSA [0669] 0.5% Tween20 [0670] Wash Buffer:
1.times.PBS+0.5% Tween20 [0671] Standard: Biotinylated TLT-1
04/09-08 1 mg/ml [0672] mAb: 0197-0000-0061-4A-0.55 mg/ml [0673]
Detecting Ab: Goat anti-Human IgG HRP-labeled 1 mg/ml Prod. no.
NEF802001EA [0674] TMB Substrate: Ready to use Cat#4390L lot.#70904
[0675] Stop Solution: 2M H.sub.3PO.sub.4
Dilution of Biotinylated TLT-1
[0676] 1 mg/ml->6.3 ng/ml (158500.times. Dilution) Concentration
in well: 0.63 ng
Dilution of Biotinylated Peptides
[0677] Approx conc 2-5 mg/ml (2.5 mg/ml) 2.5 mg/ml->10000.times.
Dilution (25 ng/well): 100 .mu.l of each peptide in each well.
Dilution of mAb0061 0.55 mg/ml->100 ng/ml (5500.times. Dilution)
Concentration in well: 10 ng
Dilution of mAb Goat Anti-Human IqG HRP
[0678] 1 mg/ml->0.2 .mu.g/ml (5000.times. Dilution)
Synthesis of Biotinylated Peptides in 96 Well Format
[0679] The biotinylated peptides were synthesised using standard
solid phase peptide synthesis. Solutions of 0.3M Fmoc-protected
amino acids in 0.3 M1-hydroxybenzotriazole (HOBt) in
N-methylpyrrolidinone (NMP) were coupled using
diisopropylcarbodiimide (DIC) for 1-4 hours. As solid support the
Rink amide LL resin (Merck) was used in a 96 microtiter filterplate
(Nunc) and ca. 20 mg resin pr well was used. The synthesis was
performed using the Multipep RS peptide synthesiser from Intavis,
Germany and manufacture protocol was used. The removal of Fmoc was
done using 25% piperidin in NMP. All peptides were coupled with
biotin at the N-terminal and 8-amino-3,6-dioxaoctanoic acid was
used as a spacer between biotin and the peptides. This spacer was
also coupled as a Fmoc-protected building block according to the
synthesis protocol (IRIS biotech, Germany)
Final Deprotection and Workup
[0680] The final deprotection was done using 90% trifluoracetic
acid (TFA), 5% triisopropylsilan and 5% H20 for 3 hours. A total of
1 ml TFA was used per well. The TFA was filtered to 96 deep well
(Nunc) and the TFA was reduced in volume by evaporation to ca.
100-200 ul per well and diethylether was added to all wells in
order to precipitate the peptides. The suspension of peptide in
diethylether was transferred to solvinert 96 well filter plate
(0.47 um, Millipore) and the peptides were washed twice with
diethylether and dried. The peptides were redissolved in 80% DMSO
and 20% water giving a stock solution of ca. 1-3 mg/ml.
TABLE-US-00019 (SEQ ID NO 6) Biotinylated 20 mer peptides from
stalk region of TLT-1 2-5 mg/ml in 75% DMSO/H2O (biotinylated in
N-terminal): Number of peptide shown at the left: 2 A 2
2619.8bio-Oeg-L-N-I-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E 3 A 3
2620.7bio-Oeg-N-I-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N 4 A 4
2577.7bio-Oeg-I-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A 5 A 5
2611.7bio-Oeg-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F 6 A 6
2585.6bio-Oeg-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S 7 A 7
2603.6bio-Oeg-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D 8 A 8
2603.6bio-Oeg-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P 9 A 9
2545.6bio-Oeg-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A 10 A10
2473.6bio-Oeg-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G 11 A11
2431.6bio-Oeg-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S 12 A12
2373.6bio-Oeg-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A 13 B 1
2358.6bio-Oeg-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N 14 B 2
2354.6bio-Oeg-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P 15 B 3
2330.7bio-Oeg-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L 16 B 4
2331.6bio-Oeg-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E 17 B 5
2315.5bio-Oeg-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P 18 B 6
2345.5bio-Oeg-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S 19 B 7
2386.5bio-Oeg-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q 20 B 8
2388.4bio-Oeg-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D 21 B 9
2446.4bio-Oeg-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E 22 B10
2445.5bio-Oeg-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K 23 B11
2418.5bio-Oeg-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S 24 B12
2460.6bio-Oeg-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I 25 C 1
2410.5bio-Oeg-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I-P 26 C 2
2436.6bio-Oeg-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I-P-L 27 C 3
2434.7bio-Oeg-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I-P-L-I (SEQ ID NO 6)
Biotinylated 16 mer peptides from the stalk region of hTLT-1 2-5
mg/ml in 75% DMSO/H2O: 29 C 5 2219.3
bio-Oeg-L-N-I-L-P-P-E-E-E-E-E-T-H-K-I-G 30 C 6 2193.2
bio-Oeg-N-I-L-P-P-E-E-E-E-E-T-H-K-I-G-S 31 C 7 2192.3
bio-Oeg-I-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L 32 C 8 2150.2
bio-Oeg-L-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A 33 C 9 2166.1
bio-Oeg-P-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E 34 C10 2183.1
bio-Oeg-P-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N 35 C11 2157.1
bio-Oeg-E-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A 36 C12 2175.2
bio-Oeg-E-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F 37 D 1 2133.2
bio-Oeg-E-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S 38 D 2 2119.2
bio-Oeg-E-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D 39 D 3 2087.2
bio-Oeg-E-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P 40 D 4 2029.2
bio-Oeg-T-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A 41 D 5 1985.2
bio-Oeg-H-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G 42 D 6 1935.2
bio-Oeg-K-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S 43 D 7 1878.1
bio-Oeg-I-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A 44 D 8 1879
bio-Oeg-G-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N 45 D 9 1919
bio-Oeg-S-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P 46 D10 1945.1
bio-Oeg-L-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L 47 D11 1961
bio-Oeg-A-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E 48 D12 1987
bio-Oeg-E-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P 49 E 1 1945
bio-Oeg-N-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S 50 E 2 1959
bio-Oeg-A-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q 51 E 3 2003
bio-Oeg-F-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D 52 E 4 1984.9
bio-Oeg-S-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E 53 E 5 2026
bio-Oeg-D-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K 54 E 6 1998
bio-Oeg-P-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S 55 E 7 2014.1
bio-Oeg-A-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I 56 E 8 2040.1
bio-Oeg-G-S-A-N-P-L-E-P-S-Q-D-E-K-S-I-P 57 E 9 2096.2
bio-Oeg-S-A-N-P-L-E-P-S-Q-D-E-K-S-I-P-L 58 E10 2122.3
bio-Oeg-A-N-P-L-E-P-S-Q-D-E-K-S-I-P-L-I
Method
[0681] The epitope mapping involved binding of mAb0061 to two
series of biotinylated peptides from the stalk region of TLT-1. The
biotinylated peptides were bound to streptavidin plates.
TABLE-US-00020 Stalk peptide:
LNILPPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPL
1) 20mer peptide mapping with one residue frameshift (20,1) (see
materials) 2) 16mer peptide mapping with one residue frameshift
(16,1) (see materials) [0682] 1. Plate was pre-washed 3.times. with
250 .mu.l wash buffer [0683] 2. 100 .mu.l Biotinylated
peptide-solution was added (from Masterplate 10000.times. diluted,
one peptide pr well) [0684] 3. Incubated at RT for 1 hour or
+5.degree. C. over night [0685] 4. Washed 3.times. with wash buffer
[0686] 5. 100 .mu.l Primary antibody was added (dilution see above)
[0687] 6. Incubated at RT for 1 hour [0688] 7. Washed 3.times. with
wash buffer [0689] 8. 100 .mu.l Secondary antibody was added
(dilution see above) [0690] 9. Incubated at RT for 1 hour [0691]
10. Washed 3.times. with wash buffer [0692] 11. 100 .mu.l
Substrate/Develop buffer was added (Reaction time 3 min) [0693] 12.
100p1 2M H3PO.sub.4 was added [0694] 13. Endpoint was read at 450
nm
[0695] Binding to biotinylated peptide in a well was recorded as
"binding" when the absorption at 450 nm was above 3. "No binding"
was recorded when signal was below 1. A signal in between was
recorded as "weak binding".
Results
[0696] The biotinylated peptides were put into wells in the
following way:
Row A: peptide 2-12 (20mers) Row B: peptide 13-24 (20mers) Row C:
peptide 25-27 (20mers) Row C: peptide 29-36 (16mers) Row D: peptide
37-48 (16mers) Row E: peptide 49-58 (16mers) Result from triple
determination:
TABLE-US-00021 1 2 3 4 5 6 7 8 9 10 11 12 A <0.1 <0.1 <0.1
>3 >3 >3 >3 >3 >3 >3 >3 B >3 >3 >3
>3 <0.1 <0.1 <0.1 <0.1 <0.1 <0.1 <0.1
<0.1 C <0.1 <0.1 <0.1 <0.1 <0.1 <0.1 <0.1
<0.1 <0.1 <0.1 >3 D >3 >3 >3 >3 >3 >3
<0.1 <0.1 <0.1 <0.1 <0.1 <0.1 E <0.1 <0.1
<0.1 <0.1 <0.1 <0.1 <0.1 <0.1 <0.1 <0.1 F G
H
[0697] In summary, the 20mer-peptides (5-16) give rise to strong
positive signals (<3) corresponding to amino acids: IGSLAENAF.
The 16mer petides 36-42 give rise to a strong positive signals
(<3) corresponding to KIGSLAENAF.
Conclusion
[0698] The peptide walking ELISA has defined the minimal binding
area of the epitope for binding to mAb0061 as the following stretch
of amino acid residues: KIGSLAENAF. This stretch is indeed part of
the epitope defined above by the crystal structure:
KIGSLANAFSDPA.
Example 26
Factor VIIa Polypeptide In Vitro Hydrolysis Assay
[0699] Native (wild-type) Factor VIIa and Factor VIIa variant (both
hereafter referred to as "Factor VIIa") are assayed in parallel to
directly compare their specific activities. The assay is carried
out in a microtiter plate (MaxiSorp, Nunc, Denmark). The
chromogenic substrate D-Ile-Pro-Arg-p-nitroanilide (S-2288,
Chromogenix, Sweden), final concentration 1 mM, is added to Factor
VIIa (final concentration 100 nM) in 50 mM Hepes, pH 7.4,
containing 0.1 M NaCl, 5 mM CaCl.sub.2 and 1 mg/ml bovine serum
albumin. The absorbance at 405 nm is measured continuously in a
SpectraMax.TM. 340 plate reader (Molecular Devices, USA). The
absorbance developed during a 20-minute incubation, after
subtraction of the absorbance in a blank well containing no enzyme,
is used to calculate the ratio between the activities of variant
and wild-type Factor VIIa:
Ratio=(A.sub.405 nmFactor VIIa variant)/(A.sub.405 nmFactor VIIa
wild-type).
Example 27
Factor VIIa Polypeptide In Vitro Protolysis Assay
[0700] Native (wild-type) Factor VIIa and Factor VIIa variant (both
hereafter referred to as "Factor VIIa") are assayed in parallel to
directly compare their specific activities. The assay is carried
out in a microtiter plate (MaxiSorp, Nunc, Denmark). Factor VIIa
(10 nM) and Factor X (0.8 microM) in 100 .mu.L 50 mM Hepes, pH 7.4,
containing 0.1 M NaCl, 5 mM CaCl.sub.2 and 1 mg/ml bovine serum
albumin, are incubated for 15 min. Factor X cleavage is then
stopped by the addition of 50 .mu.L 50 mM Hepes, pH 7.4, containing
0.1 M NaCl, 20 mM EDTA and 1 mg/ml bovine serum albumin. The amount
of Factor Xa generated is measured by addition of the chromogenic
substrate Z-D-Arg-Gly-Arg-p-nitroanilide (S-2765, Chromogenix,
Sweden), final concentration 0.5 mM. The absorbance at 405 nm is
measured continuously in a SpectraMax.TM. 340 plate reader
(Molecular Devices, USA). The absorbance developed during 10
minutes, after subtraction of the absorbance in a blank well
containing no FVIIa, is used to calculate the ratio between the
proteolytic activities of variant and wild-type Factor VIIa:
Ratio=(A.sub.405 nmFactor VIIa variant)/(A.sub.405 nmFactor VIIa
wild-type).
Example 28
Factor VIIIa Activity Assay: Chromogenic Assay
[0701] The FVIII activity (FVIII:C) of the rFVIII compound is
evaluated in a chromogenic FVIII assay using Coatest SP reagents
(Chromogenix) as follows: rFVIII samples and a FVIII standard (e.g.
purified wild-type rFVIII calibrated against the 7th international
FVIII standard from NIBSC) are diluted in Coatest assay buffer (50
mM Tris, 150 mM NaCl, 1% BSA, pH 7.3, with preservative). Fifty
.mu.l of samples, standards, and buffer negative control are added
to 96-well microtiter plates (Nunc) in duplicates. The factor
IXa/factor X reagent, the phospholipid reagent and CaCl.sub.2 from
the Coatest SP kit are mixed 5:1:3 (vol:vol:vol) and 75 .mu.l of
this added to the wells. After 15 min incubation at room
temperature, 50 .mu.l of the factor Xa substrate S-2765/thrombin
inhibitor 1-2581 mix is added and the reagents incubated for 10
minutes at room temperature before 25 .mu.l 1 M citric acid, pH 3,
is added. The absorbance at 415 nm is measured on a Spectramax
microtiter plate reader (Molecular Devices) with absorbance at 620
nm used as reference wavelength. The value for the negative control
is subtracted from all samples and a calibration curve prepared by
linear regression of the absorbance values plotted vs. FVIII
concentration. Specific activity is calculated by dividing the
activity of the samples with the protein concentration determined
by HPLC. The concentration of the sample is determined by
integrating the area under the peak in the chromatogram
corresponding to the light chain and compare with the area of the
same peak in a parallel analysis of a wild-type unmodified rFVIII,
where the concentration is determined by amino acid analyses.
Example 29
Factor VIIIa Activity Assay: One-Stage Clot Assay
[0702] FVIII activity (FVIII:C) of the rFVIII compounds is further
evaluated in a one-stage FVIII clot assay as follows: rFVIII
samples and a FVIII standard (e.g. purified wild-type rFVIII
calibrated against the 7th international FVIII standard from NIBSC)
are diluted in HBS/BSA buffer (20 mM hepes, 150 mM NaCl, pH 7.4
with 1% BSA) to approximately 10 U/ml, followed by 10-fold dilution
in FVIII-deficient plasma containing VWF (Dade Behring). Samples
are subsequently diluted in HBS/BSA buffer. The APTT clot time is
measured using an ACL300R or an ACL5000 instrument (Instrumentation
Laboratory) using the single factor program. FVIII-deficient plasma
with VWF (Dade Behring) is used as assay plasma and SynthASil,
(HemosIL.TM., Instrumentation Laboratory) as aPTT reagent. In the
clot instrument, the diluted sample or standard is mixed with
FVIII-deficient plasma and aPTT reagents at 37.degree. C. Calcium
chloride is added and time until clot formation is determined by
measuring turbidity. The FVIII:C in the sample is calculated based
on a standard curve of the clot formation times of the dilutions of
the FVIII standard.
Example 30
Factor Xa Polypeptide In Vitro Protolysis Assay
[0703] Preactivated native (wild-type) Factor Xa and preactivated
Factor Xa variant (both hereafter referred to as "Factor Xa") are
assayed in parallel to directly compare their specific activities.
The assay is carried out in a microtiter plate (MaxiSorp, Nunc,
Denmark). Factor Xa (10 nM) and Prothrombin (0.8 microM) in 100
.mu.L 50 mM Hepes, pH 7.4, containing 0.1 M NaCl, 5 mM CaCl.sub.2
and 1 mg/ml bovine serum albumin, are incubated for 15 min.
Prothrombin cleavage is then stopped by the addition of 50 .mu.L 50
mM Hepes, pH 7.4, containing 0.1 M NaCl, 20 mM EDTA and 1 mg/ml
bovine serum albumin. The amount of Thrombin generated is measured
by addition of the chromogenic substrate
H-D-Phenylalanyl-L-pipecolyl-L-Arg-p-nitroanilide (S-2738,
Chromogenix, Sweden), final concentration 0.5 mM. The absorbance at
405 nm is measured continuously in a SpectraMax.TM. 340 plate
reader (Molecular Devices, USA). The absorbance developed during 10
minutes, after subtraction of the absorbance in a blank well
containing no FXa, is used to calculate the ratio between the
proteolytic activities of variant and wild-type Factor FXa:
Ratio=(A.sub.405 nmFactor Xa variant)/(A.sub.405 nmFactor Xa
wild-type).
Example 31
Chemical Conjugation of an Anti-TLT-1 Antibody (Fragment) with a
Coagulation Factor
[0704] A compound of the general formula
##STR00009##
[0705] wherein "anti-TLT-1 mAb (fragment)" may be a full size mAb
against TLT-1 or a fragment or an analogue intellectually derived
thereof such as but not limited to, a FAB-fragment or a sc-FAB with
none, one or more point mutations, the linker may be a water
soluble polymer such as but not limited to e.g. PEG, polysialic
acid, or hydroxyethyl starch, and FVIIa is any molecule with a
sequence similarity of >50% to native FVIIa with any retained
activity of FVIIa may, for example, be prepared in a two step
procedure.
[0706] During the first step, a linker, with two different reactive
groups RS1 and RS2 may be attached to the anti-TLT-1 mAb
(fragment). The reaction may be run with low site selectivity or in
a selective way, such that RS1 only reacts at one or few position
of the anti TLT-1 mAb (fragment). As a non-exclusive example, RS1
could be an aldehyde and react by reductive amination only with
N-termini of the anti TLT-1 mAb (fragment) by reductive amination,
known to a person trained in the art. Another non-exclusive example
RS1 could be a maleimide group, which may react with a free thiol
on the anti-TLT-1 mAb (fragment).
##STR00010##
[0707] During the second step, the reactive group RS2 may be
reacted with low site selectivity or site selectivity with a FVIIa
molecule. As a non-exclusive example, a site selective reaction at
FVIIa may be obtained when RS2 is a sialic acid derivative, which
can react in the presence of a suitable enzyme such as but not
limited to ST3Gal-III with N-linked glycans, which do not end
exclusively with sialic acids.
##STR00011##
[0708] The order of attachment of the linker to the two proteins,
namely the anti-TLT-1 mAb (fragment) and the FVIIa molecule may be
switched, thereby attaching the RS1-Linker-RS2 molecule first to
the FVIIa molecule and then to the anti TLT-1 mAb (fragment).
Example 32
Conjugation of Anti TLT-1-FAB Fragment (Fab0084) to FVIIa for
Production of FVIIa-Fab1029
##STR00012##
[0709] Step 1: 3-(2,5-Dioxo-2,5-dihydropyrrol-1-yl)propionic acid
2,5-dioxopyrrolidiny-1-yl ester
##STR00013##
[0711] 3-Maleimidopropionic acid (1.0 g, 5.9 mmol) was dissolved in
tetrahydrofuran (20 ml). 2-Succinimido-1,1,3,3-tetramethyluronium
tetrafluoroborate (TSTU, 2.14 g, 7.1 mmol) and
ethyldiisopropylamine (1.24 ml, 7.1 mmol) were added subsequently.
N,N-Dimethylformamide (5 ml) was added. The reaction mixture was
stirred at room temperature, while it was turning sluggish. The
mixture was stirred for 2 min. N,N-Dimethylformamide (5 ml) was
added. The mixture was stirred for 2.5 h at room temperature. It
was diluted with dichloromethane (150 ml) and was washed
subsequently with a 10% aqueous solution of sodium hydrogensulphate
(150 ml), a saturated aqueous solution of sodium hydrogencarbonate
(150 ml) and water (150 ml). It was dried over magnesium sulphate.
The solvent was removed in vacuo. The crude product was
recrystallized from ethyl acetate to give 1.20 g of
3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionic acid
2,5-dioxopyrrolidiny-1-yl ester.
[0712] MS: m/z=289, required for [M+Na].sup.+: 289
[0713] .sup.1H-NMR (CDCl.sub.3) .delta. 2.82 (m, 4H); 3.02 (t, 2H);
3.94 (t, 2H), 6.73 (s, 2H).
Step 2:
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino-
).sub.1-0 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (NNC 0129-0000-3259)
##STR00014##
[0715] N-((3-(.omega.-Amino10 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (100 mg, 0.009 mmol) was dissolved in a mixture of
tetrahydrofuran (2 ml) and dichloromethane (10 ml). A solution of
3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionic acid
2,5-dioxopyrrolidiny-1-yl ester (50 mg, 0.18 mmol) in
dichloromethane (3 ml) was added. Ethyldiisopropylamine (0.005 ml,
0.028 mmol) was added. The reaction mixture was stirred at room
temperature for 16 h. Dichloromethane (2 ml) and
ethyldiisopropylamine (0.5 ml) were added. Amionomethylated
polystyrene resin (commercially available at e.g. Novabiochem,
loading 0.85 mmol/g, 438 mg, 0.372 mmol) was added. The mixture was
slowly stirred at room temperature for 1 h. The resin was removed
by filtration. The solvent was removed in vacuo with a bath
temperature of 25.degree. C. The residue was dissolved in
dichloromethane (4 ml). Ether (200 ml) was added. The mixture was
left at room temperature for 2 h in order to let the formed
precipitation grow old. The precipitation was isolated by
filtration and dried in vacuo to give 38 mg of the title compound.
The .sup.1H-NMR spectrum in DMSO-d.sub.6 showed the presence of a
maleimide group.
Step 3: Attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
Acid to an Anti-TLT-1 FAB
##STR00015##
[0717] A LC-MS analysis of an anti-TLT-1 FAB fragment with parts of
the hinge region wherein an unpaired Cys was incorporated indicated
that the unpaired Cys was capped with a cysteine. Therefore, prior
reaction with
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid decapping of the unpaired Cys by reaction with
tris(2-carboxyethyl)phosphine hydrochloride had to be
performed.
[0718] A solution of an anti-TLT-1 FAB fragment with parts of the
hinge region wherein an unpaired Cys was incorporated (1 mg) in a
buffer of 20 mM HEPES, 5.0 mM EDTA, 100 mM NaCl, which had been
adjusted to pH 7.5 was placed in amicon ultracentrifugation device
with a cut off of 10 kDa. The buffer was changed to a buffer
composed of 20 mM imidazole, 10 mM CaCl.sub.2, 0.02% Tween 80, 1 M
glycerol, which had been adjusted to pH 7.35 by repeated
ultracentrifugation at 4000 rpm. After the buffer was changed, a
solution of the protein in the buffer composed of 20 mM imidazole,
10 mM CaCl.sub.2, 0.02% Tween 80, 1 M glycerol, which had been
adjusted to pH 7.35 (4 ml) was obtained. A 1 mg/ml solution of
tris(2-carboxyethyl)phosphine hydrochloride (0.40 ml) was added.
The reaction mixture was shaken at 300 rpm at 20.degree. C. for 1
h. The reaction mixture was placed in an ultracentrifugation device
with a cut off of 10 kDa and was concentrated by
ultracentrifugation at 4000 rpm for 7 min, leaving a solution of
0.700 ml behind. This was applied to a PD-10 column (Amersham
Bioscience), which had been equilibrated with a buffer of 25 mM
HEPES, which had been adjusted to pH 7.00. The protein was eluted
from the column using a buffer of 25 mM HEPES, which had been
adjusted to pH 7.00 (3.2 ml). This solution was concentrated by
ultracentrifugation at 4000 rpm in an Amicon ultracentrifugation
device with a cut off of 10 kDa for 7 min to yield a solution of
0.750 ml. The solution was placed in a vial and buffer of 25 mM
HEPES, which had been adjusted to pH 7.00 (0.360 ml) was added. A 1
mg/ml solution of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (0.89 ml) was added. The reaction mixture was gently shaken at
300 rpm at 20.degree. C. for 3.5 h. It was placed in an Amicon
ultracentrifugation device with a cut off of 10 kDa and
concentrated by ultracentrifugation at 4000 rpm for 10 min to a
volume of 0.120 ml. The solution was subjected to a size exclusion
chromatography on a Superose 75 10/300 GL column (GE Healthcare) at
a flow of 0.50 ml/min, utilizing a buffer composed of 25 mM TRIS,
150 mM NaCl, which had been adjusted to pH 8.00 as eluent.
Fractions were pooled on the basis of the UV-trace at 280 nm of the
chromatogram. The pool (0.148 mg, 1.4 ml), containing the desired
compound as judged by SDS-PAGE and which were devoid of free PEG
reagent as judged by SDS-PAGE utilizing a PEG-specific staining
method (described in Kurfurst, M. M. Analyt. Biochem. 1992, 200,
244-248.) was used in the following step.
Step 4: Immobilized Sialidase
[0719] (C. Perfingens type VI-A immobilized on agarose, Sigma:
N-5254, 0.6-1.8 U/ml gel, 0.180 ml) was washed with water
(2.times.0.50 ml) and subsequently with a buffer of 25 mM MES, 20
mM CaCl.sub.2, 100 mM NaCl, which had been adjusted to pH 6.1
(3.times.0.50 ml). A solution of FVIIa (0.50 mg) in a buffer
composed of 25 mM Gly-Gly, 10 mM CaCl.sub.2, which had been
adjusted to pH 6.0 was added to the immobilized sialidase. The
reaction mixture was left at room temperature, while it was mixed
carefully every 20 min. After 3 h, the immobilized resin was
removed by filtration through a Pierce spin column by
centrifugation at 2000 rpm for 2 min.
[0720] The product mixture of the attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid to an anti TLT-1 FAB as described in a preceding step was
placed in an Amicon ultracentrifugation device with a cut off of 10
kDa. The buffer was changed by repeated ultracentrifugation to a
buffer composed of 25 mM MES, 20 mM CaCl.sub.2, 100 mM NaCl, which
had been adjusted to pH 6.1.
[0721] To this solution, a part of the solution of the FVIIa
derivative (0.092 ml) was added. The buffer was changed into a
buffer composed of 25 mM MES, 20 mM CaCl.sub.2, 100 mM NaCl, which
had been adjusted to pH 6.1 and a total volume of (0.20 ml). A
solution of ST3-Gal-III (0.015 ml) was added. The reaction mixture
is gently shaken at 32.degree. C. for 25 min and thereafter left at
32.degree. C. for 16 h. A 10 mg/ml solution of
CMP-N-acetylneuraminic acid (CMP NeuNAc, 0.70 mg, 0.070 ml) in a
buffer of 25 mM MES, 20 mM CaCl.sub.2, 100 mM NaCl, which had been
adjusted to pH 6.1 was added. The reaction mixture was gently
shaken at 32.degree. C. for 15 min and thereafter left at
32.degree. C. for 1 h. The reaction mixture was subjected to a size
exclusion chromatography on a Superdex 200 10/300 GL column (GE
Healthcare) with a flow of 0.5 ml/min utilizing a buffer of 10 mM
Histidine, 20 mM CaCl.sub.2, 150 mM NaCl which had been adjusted to
pH 6.1 as eluent. The fractions containing the desired product as
judged by SDS-PAGE on a TRIS-Acetate gel were pooled. Using a molar
absorption of 11.22 at 280 nm on a Nandrop.RTM. apparatus, a yield
of 0.022 mg was found. The result of a SDS-PAGE analysis was in
accordance with the expectation for the desired product. The
product was named FVIIa-Fab1029.
Example 33
Conjugation of an Anti-TLT-1-FAB Fragment (Fab0084) to FVIII,
FVIII-Fab3002
##STR00016##
[0722] Step 1: Attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
Acid to an Anti TLT-1 FAB Fragment
##STR00017##
[0724] A LC-MS analysis of an anti-TLT-1 FAB fragment with parts of
the hinge region wherein an unpaired Cys was incorporated indicated
that the unpaired Cys may be capped with a cysteine. Therefore,
prior reaction with
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)1-
0 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid decapping of the unpaired Cys by reaction with
tris(2-carboxyethyl)phosphine hydrochloride (TCEP) had to be
performed.
[0725] Said TLT-1-FAB-fragment (1.35 mg, 27.4 nmol) in a 0.27 mg/ml
solution in a buffer composed of 20 mM HEPES, 5 mM EDTA, 100 mM
NaCl which had been adjusted to pH 7.5 was placed in an Amicon
ultracentrifugation device with a cut off of 10 kDa. It was
subjected to ultracentrifugation at 4000 rpm at 20.degree. C. for
10 min. Buffer composed of 20 mM imidazole, 10 mM CaCl.sub.2, 0.02%
Tween 80, 1 M glycerol which had been adjusted to pH 7.35 (4 ml)
was added. The mixture was subjected to ultracentrifugation at 4000
rpm at 20.degree. C. for 8 min. Buffer composed of 20 mM imidazole,
10 mM CaCl.sub.2, 0.02% Tween 80, 1 M glycerol which had been
adjusted to pH 7.35 (4 ml) was added. The mixture was subjected to
ultracentrifugation at 4000 rpm at 20.degree. C. for 8 min. Buffer
composed of 20 mM imidazole, 10 mM CaCl.sub.2, 0.02% Tween 80, 1 M
glycerol which had been adjusted to pH 7.35 (3 ml) was added. The
mixture was subjected to ultracentrifugation at 4000 rpm at
20.degree. C. for 10 min. The mixture was placed in a reaction
vial. Buffer composed of 20 mM imidazole, 10 mM CaCl.sub.2, 0.02%
Tween 80, 1 M glycerol which had been adjusted to pH 7.35 (4 ml)
was added, so that the total volume of the reaction mixture was at
this time 4.7 ml. A 1 M solution of TCEP (0.54 ml) in a buffer of
imidazole, 10 mM CaCl.sub.2, 0.02% Tween 80, 1 M glycerol which had
been adjusted to pH 7.35 was added. The reaction mixture was shaken
at 300 rpm for 1 h. The mixture was divided into two parts each of
which was applied to a PD-10 column (GE Healthtech) which had been
equilibrated with a buffer of 25 mM HEPES with a pH 7.0. The
eluates were combined (7 ml in total) and were concentrated to 1 ml
by ultracentrifugation at 4000 rpm for at 20.degree. C. for 6-8 min
in an Amicon ultracentrifugation device with a cut off of 10
kDa.
[0726] The solution was placed in a reaction vial. A buffer of 25
mM HEPES which had been adjusted to pH 7.0 (0.50 ml) was added to
obtain a total volume of 1.5 ml. A freshly prepared 1 mg/ml
solution of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (1.2 ml, 1.2 mg, 109 nmol) in a buffer of 25 mM HEPES which
had been adjusted to pH 7.0 was added. The reaction mixture was
gently shaken at 300 rpm at 20.degree. C. for 3.2 h. It was
concentrated to a volume of 0.30 ml by ultracentrifugation at 4000
rpm at 19.degree. C. for 11 min in an Amicon ultracentrifugation
device with a cut off of 10 kDa. It was applied to a size exclusion
chromatography on a Superdex 75 10/300 GL column (GE Healthtech) at
a flow of 0.50 ml/min utilizing a buffer of 25 mM TRIS, 150 mM NaCl
which had been adjusted to pH 8.0 as eluent. The fraction
containing the desired product in an acceptable purity as judged by
SDS-PAGE analysis in the presence of N-methylmaleimide (NEM) and
which were devoid of unreacted
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid as judged by SDS-PAGE in combination with a PEG-sensitive
staining ((described in Kurfirst, M. M. Analyt. Biochem. 1992, 200,
244-248.)) was used in the following step. The SDS-PAGE analysis
under reducing conditions was in compliance with the expected
result for the desired product. The SDS-PAGE analysis under
non-reducing conditions showed some material, in which one chain of
the anti-TLT-1-FAB fragment had been lost. However, it remained
unsolved, whether this finding was due to problems in the analysis
or whether a chain had really been lost either during the described
reaction or even earlier. Using a molar absorbance of 10.44 at 280
nm on a Nanodrop.RTM. apparatus, a concentration of 0.1 mg/ml was
found giving a yield of 0.287 mg.
Step 2
[0727] The solution of the product of the attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)10
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid to an anti TLT-1 FAB fragment as described in the preceding
example and a solution of B-domain deleted FVIII which had a
residual B-domain sequence of SFSQNSRHPSQNPPVLKRHQR at the
C-terminus of the heavy chain (0.780 mg, 5.64 mmol) in a buffer
composed of 20 mM imidazole, 10 mM CaCl.sub.2, 150 mM NaCl, 0.02%
Tween80 and 1 M glycerol which had been adjusted to pH 7.35 (0.018
ml) were mixed and placed in an Amicon ultracentrifugation device
with a cut off of 10 kDa. The solution was subjected to a buffer
change to 20 mM histidine, 10 mM CaCl.sub.2, 20% glycerol, 0.02%
Tween 80, 500 mM NaCl which had been adjusted to pH 6.05 by
repeating ultracentrifugation and addition of the buffer. A total
volume of 0.40 ml was obtained. A 0.4 mg/ml (242 U/mg, 98 U/ml,
0.0055 ml) solution of sialidase from A. Urifaciens and a 2.5 mg/ml
solution of ST3Gal-III (0.033 ml) were added subsequently. The
reaction mixture was gently shaken for 15 min at 300 rpm at
32.degree. C., left for 2 h at 32.degree. C. during which it was
occasional shaken carefully, and finally left at 32.degree. C. for
18 h. The reaction mixture was diluted with water (0.030 ml). It
was subjected to a size exclusion chromatography using a Superose 6
10/300 GL column (GE Healthcare) and utilizing a buffer of 10 mM
Histidine, 1.7 mM CaCl.sub.2, 0.01% Tween80, 0.3 M NaCl, 8.8 mM
sucrose which had been adjusted to pH 7 at a flow of 0.50 ml/min.
The fractions containing the desired product as judged by SDS-PAGE
analysis were pooled. The pool was subjected to a buffer change
using an Amicon ultracentrifugation device with a cut off of 10 kDa
to a buffer composed of 20 mM histidine, 10 mM CaCl.sub.2, 1 M
glycerol, 0.02% Tween 80, 500 mM NaCl which had been adjusted to pH
6.07. A total volume of 0.250 ml was obtained. Using a molar
absorption of 14.6 at 280 nm on a Nanodrop apparatus, a
concentration of 0.59 mg/ml was found, corresponding to a yield of
0.148 mg. A 10 mg/ml solution of CMP-N-acetylneuraminic acid (CMP
NeuNAc, 0.26 mg, 0.026 ml) in a buffer of 20 mM histidine, 10 mM
CaCl.sub.2, 20% glycerol, 0.02% Tween 80, 500 mM NaCl which had
been adjusted to pH 6.05 and a solution of ST3Gal-III (0.015 ml)
was added. The reaction mixture was shaken gently at 300 rpm at
32.degree. C. for 15 min and then left at 32.degree. C. for another
45 min. The reaction mixture was diluted with water (0.10 ml). It
was subjected to a size exclusion chromatography using Superose 6
10/300 GL column (GE Healthcare) and utilizing a buffer of 10 mM
Histidine, 1.7 mM CaCl.sub.2, 0.01% Tween80, 0.3 M NaCl, 8.8 mM
sucrose which had been adjusted to pH 7 at a flow of 0.50 ml/min.
The fractions containing the desired product as judged by SDS-PAGE
analysis were pooled giving and concentrated by ultracentrifugation
in an Amicon ultracentrifugation device to a total volume of
approximately 0.275 ml. Using a molar absorption at 280 nm of 14.6
on a Nanodrop.RTM. apparatus, a concentration of 0.180 ml/ml was
found corresponding to a yield of 0.0495 mg. The SDS-PAGE analysis
of the product under reduced conditions is in accordance with the
expectation for the desired product. The SDS-PAGE analysis under
non-reduced conditions shows changing amounts of a band which
corresponds to a product where the FAB-fragment has lost one chain.
The appearance of a band corresponding to a may be due to the
presence of such compound in the product or may be due to
decomposition during denaturizing prior SDS-PAGE analysis.
Example 34
Binding to TLT-1
TABLE-US-00022 [0728] TABLE 16 Reagents Reagent Source TLT-1
Example 2 FVIIa-Fab1029 Example 32 FIX-Fab0135 Example 16 All other
reagents Biacore
Method:
[0729] TLT-1 was immobilized directly to a CM5 chip to a level of
approx 2000 RU (50 ug/ml diluted in Na-acetate, pH 4.0) using the
standard procedure recommended by the supplier and reagents
provided in Table 16. Two-fold dilutions of FVIIa-Fab1029 and
FIX-Fab0135 from 20 nM to 0.3 nM were tested for binding to TLT-1.
Running and dilution buffer: 10 mM HEPES, 150 mM, 0.005% p20, pH
7.4. Regeneration was obtained by 10 mM Glycine, pH 1.7.
Determination of kinetic and binding constants (k.sub.on,
k.sub.off, K.sub.D) was obtained assuming a 1:1 interaction of
TLT-1 and FVIIa-Fab1029 or FIX-Fab0135 using the Biacore T100
evaluation software.
Result:
TABLE-US-00023 [0730] TABLE 17 TLT-1 binding ka (1/M) kd (1/s)
K.sub.D (M) TLT-1 FVIIa-Fab1029 3.97E+05 0.007259 1.83E-08
FIX-Fab0135 4.28E+05 8.71E-04 2.04E-09
Conclusion:
[0731] Binding constants for FVIIa-Fab1029 and FIX-Fab0135 binding
to TLT-1 was estimated by biacore analysis and binding to TLT-1 was
confirmed (Table 17).
Example 35
FVIIa-Fab1029 Promotes Fibrin Clot Formation in Hemophilia-Like
Whole Blood
[0732] The TEG traces obtained with normal HWB (NWB), "hemophilia"
blood, and "hemophilia" blood supplemented with (0; 0.25; 0.5;
1.0;nM) of FVIIa-Fab1029 or rFVIIa are shown in FIG. 11A. Shown in
FIG. 11B are the R-time values obtained for the depicted TEG
traces. FIG. 11B, in addition to R-time values for the
FVIIa-Fab1029 or rFVIIa protein, also includes R-time values for
equivalent concentrations of rFVIIa. All data are obtained from one
representative donor. The FVIIa-Fab1029 is observed to efficiently
normalize clotting of hemophilia-like HWB. In addition the results
show that the known pro-coagulant effect of rFVIIa is further
potentiated by conjugation of rFVIIa to a FAb fragment of an
antibody against TLT-1. Thus, the example with the FVIIa-Fab1029
protein demonstrates that targeting of rFVIIa to TLT-1 on platelets
further potentiates the FVIII bypassing activity of rFVIIa.
Example 36
FIX-Fab0135 has FVIII-Bypassing Activity and Promotes Fibrin Clot
Formation in Hemophilia A-Like Whole Blood
[0733] Citrated-stabilized human whole blood (HWB) is drawn from
normal donors. Clot formation is measured by thrombelastography
(5000 series TEG analyzer, Haemoscope Corporation, Niles, Ill.,
USA). Hemophilia A-like conditions are obtained by incubation of
normal citrate-stabilized human whole blood (HWB) with 10 .mu.g/ml
anti-FVIII antibody (Sheep anti-Human Factor VIII; Hematologic
Technologies Inc) for 30 min at room temp. Various concentrations
(0.1; 0.2; 1.0; 5.0; 10 nM) of the FIX-Fab0135 are added to
hemophilia A-like citrated HWB. Clotting is initiated when 340
.mu.l of normal or premixed HWB is transferred to a
thrombelastograph cup containing 20 .mu.l 0.2 M CaCl.sub.2 with
0.03 .mu.M lipidated TF (Innovin.RTM., Dade Behring GmbH (Marburg,
Germany). The TEG trace is followed continuously for up to 120 min.
TEG traces obtained with normal HWB (HWB), "hemophilia" blood, and
"hemophilia" blood supplemented with (0.1; 0.2; 1.0; 5.0; 10 nM) of
FIX-Fab0135 are shown in FIG. 12. Also shown for comparison are the
TEG traces obtained when FIX-Fab0135 is replaced by 1 nM rFVIIa or
10 nM rFIX. All data are obtained from one representative
donor.
[0734] Surprisingly the results show that fusion of FIX to a FAb
fragment of an antibody against TLT-1 produces a protein with FVIII
bypassing activity. The FIX-Fab0135 is observed to efficiently
normalize clotting of hemophilia A-like HWB. FIX dependent
propagation of the coagulation requires assembly of a FIXa/FVIIIa
complex on the surface of activated platelets, and the resulting FX
activation (tenase) activity is prevented by inhibitory FVIII
antibodies. The present example with FIX-Fab0135 demonstrates that
targeting of FIX to TLT-1 on the surface of platelets generates a
FIX containing complex with pro-coagulant activity even when FVIII
is blocked by an inhibitory antibody.
Example 37
FIX-Fab0135 Fusion Protein Targeted to TLT-1 Enriched Phospholipid
Vesiches Markedly Promotes FX Activation Induced by FVIIa in
Absence of FVIII
[0735] Methods: TLT-1 enriched phospholipid vesicles, prepared as
described in Example 20 are applied in the experiment shown in FIG.
13 to mimic TLT-1 on the surface of activated platelets. Various
concentrations (0.05-100 nM).sub.rFVIIa is incubated at room
temperature for 15 min i) in Hepes buffer (50 mM Hepes, 0.1 M NaCl,
5 mM CaCl.sub.2, 1 mg/ml BSA pH 7.4) or in Hepes buffer with ii) 10
nM FIX, iii) 10 nM FIXa or iv) 10 nM FIX-Fab0135. This is then
mixed with 100 nM FX (Enzyme Research Laboratories, UK) and TLT-1
enriched phospholipid vesicles at 1:4,000 dilution in absence or
presence of 5 nM FVIII and incubated for 3 min. The reaction is
stopped by addition of an equal volume stop buffer (50 mM Hepes,
0.1 M NaCl, 20 mM EDTA, 1 mg/ml BSA pH 7.5). The amount of FXa
generated in the samples is then determined in a chromogenic assay
by transferring 50 .mu.l of the mixture to a microtiter plate well
and adding 25 .mu.l Chromozyme X (final 0.42 mg/ml) to the well.
The absorbance at 405 nm is measured continuously in a microplate
Spectramax photometer (Molecular Devices, Sunnyvale Calif.,
USA).
[0736] FVIIa is capable of activating FIX (Osterud and Rappaport,
1977) and the resulting FIXa is then designated to combine with
FVIIIa and form the proteolytic component of the so-called tenase
complex. Formation of this complex takes place on the surface of
activated platelets. The tenase complex is responsible for a
massive FX activation that plays a key role in the propagation
phase of the coagulation process. Inability to form an active
tenase complex is the central diathesis in both hemophilia A and B
patients.
[0737] In the present example, TLT-1 enriched phospholipid vesicles
are applied to mimic the surface of activated platelets. This
system is used to test whether targeting of FIX to TLT-1 on such
vesicles by means of the FIX-Fab0135 can promote FX activation in
analogy with the tenase complex on activated platelets. Furthermore
it is of interest to examine whether the presence of FVIII is
obligatory or not for this activity.
[0738] FIG. 13 shows: 1) that very little FXa is generated at all
FVIIa concentrations tested in absence and presence of 5 nM FVIII
under the conditions of the experiment without FIX derivatives
added (o); 2) that this is the case also when 10 nM FIX is present
in the reaction mixture (.quadrature.); 3) that a marked FX
activation is observed when 10 nM FIX is replaced by 10 nM FIXa,
however, only in the presence of FVIII ( ); 4) that targeting of
FIX to TLT-1 enriched phospholipid vesicles by means of the
FIX-Fab0135 provides a complex which is activated by FVIIa in a
concentration dependent manner; 5) that the resulting activated
tenase-like complex markedly promotes FX activation both in
presence and in absence of FVIII.
[0739] These results, as well as those of example 36, suggest that
the FIX-Fab0135 FIX fusion protein provides a FVIII bypassing agent
which markedly promotes FVIIa-mediated FXa activation by a
mechanism which involves FVIIa activation of FIX targeted to TLT-1
and formation of a complex with a considerable FVIII-independent
tenase-like activity.
Example 38
TLT-1 Expression on Human Platelets
[0740] TLT-1 has been reported to only be expressed on activated
platelets (Washington et al. (2004) Blood. 2004 Aug. 15;
104(4):1042-7). To verify this and estimate the specific copy
number of TLT-1 on the platelet surface we used the "Platelet
calibrator kit" from Biocytex (Marseille, France) in which
platelets are stained by no wash indirect immunoflurescence with
specific monoclonal antibodies and analyzed by quantitative flow
cytometry. The expression level of the tested antigen is determined
using calibration beads with a definite number of binding sites for
the detecting antibody. According to manufacturers instruction
platelets in citrated human whole blood were activated by different
concentrations (0.3-30 .mu.M) of protease activated receptor
(PAR)-1 activating peptide with amino acid sequence SFLLRN. The
samples were diluted 1:4 in a saline buffer provided in the kit
before labeled with TLT-1 binding antibodies. The TLT-1 binding
antibodies used were either mAb0123 (IgG1 subtype of the mAb0023
antibody) or mAb0136 (IgG1 subtype of the mAb0012 antibody). After
15 min incubation with either of the TLT-1 antibodies (10 .mu.g/ml)
followed by 15 min incubation with FITC labeled detecting antibody
(provided by the manufacturer) the samples were diluted 1:50 before
immediately flow cytometry analysis. The absolute number of TLT-1
on the platelet surface was obtained by using the bead derived
standard curve.
[0741] Unactivated platelets show no expression of TLT-1 with none
of the two antibodies used. However, when the platelets were
activated with SFLLRN an increased TLT-1 expression was observed
with a maximal expression of 9685.+-.1696 and 12981.+-.2083 surface
molecules detected by mAb0123 and mAb0136 respectively (FIG. 14).
Maximal platelet TLT-1 expression was achieved by double
stimulation by SFLLRN (30 .mu.M) and Convulxin (100 ng/ml).
Example 39
Conjugation of Anti TLT-1-FAB Fragment (Fab0084) to FVIIa Via a 3
kDa PEG Linker, FVIIa-Fab1001
##STR00018##
[0742] Step 1: N-((3-(.omega.-(Fluorenylmethoxycarbonylamino)3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
Acid
##STR00019##
[0744] 3-(.omega.-(Fluorenylmethoxycarbonlyamino)3 kDa
PEGyl)propionic acid pyrrolidin-2,5-dion-1-ylester (purchased at
Rapp Polymere GmbH, 1 g, 0.292 mmol) was dissolved in
tetrahydrofuran (80 ml). A solution of
cytidine-5'-monophospho-N-glycylneuraminic acid disodium salt
(0.276 g, 0.438 mmol) in a buffer (20 ml) composed of 50 mM TRIS,
which had been adjusted to pH 8.9 was added. The reaction mixture
was stirred at room temperature for 16 h. The THF was removed in
vacuo, having a bath temperature of 25.degree. C. The remaining
mixture was diluted with water up to 60 ml and was filtered through
a 0.45 .mu.m filter. The solution was divided into three parts each
of which was subjected to an HPLC chromatography on a C4 column,
using a flow of 20 ml/min and a gradient of 0-60% acetonitrile in
an aqueous buffer of 50 mM ammonium hydrogencarbonate over 50 min
after it had washed with an aqueous buffer of 50 mM ammonium
hydrogencarbonate for 10 min. Fractions were combined, having no
cytidine-5'-monophospho-N-glycylneuraminic acid and having an
absorption at 214 nm greater than 15-20% of the maximum absorption.
The combined fractions were freeze dried to give 532 mg of
N-((3-(.omega.-(fluorenylmethoxycarbonylamino)3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid. The .sup.1H-NMR spectrum was in accordance with the
expectation.
Step 2: N-((3-(.omega.-Amino-3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
Acid
##STR00020##
[0746] N-((3-(.omega.-(Fluorenylmethoxycarbonylamino)3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (532 mg, 0.135 mmol) was dissolved in N,N-dimethylformamide (9
ml). Piperidine (2.25 ml) was added. The reaction mixture was
stirred for 20 min at room temperature. Ether (150 ml) was added.
The mixture was left at room temperature for 1 h. The formed
precipitate was isolated by decantation and centrifugation. It was
dissolved in dichloromethane (10 ml). Ethyldiisopropylamine (2.4
ml) was added. The mixture was stirred for 2 min. Ether (150 ml)
was added. The mixture was left for 1.5 h in order to let the
precipitate grow old. The precipitate was isolated by decantation
and filtration. It was dried in vacuo with a bath temperature of
25.degree. C. to give 343 mg of N-((3-(.omega.-amino-3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid. The .sup.1H-NMR was in accordance with the expectation.
Step 3:
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino-
)3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (NNC 0129-0000-3259)
##STR00021##
[0748] N-((3-(.omega.-Amino-3 kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-1-neuraminic
acid (343 mg, 0.009 mmol) was dissolved in a mixture of
dichloromethane (15 ml). Ethyldiisopropylamine (0.05 ml, 0.028
mmol) was added. 3-(2,5-Dioxo-2,5-dihydropyrrol-1-yl)propionic acid
2,5-dioxopyrrolidiny-1-yl ester (492 mg, 1.85 mmol) was added as a
solid. The reaction mixture was stirred at room temperature for 16
h. Dichloromethane (140 ml) was added. Amionomethylated polystyrene
resin (commercially available at e.g. Novabiochem, loading 0.85
mmol/g, 4.3 g, 3.69 mmol) was added. The mixture was slowly stirred
at room temperature for 1 h. The resin was removed by filtration.
The solvent was removed in vacuo with a bath temperature of
25.degree. C. Amberlyst 15 resin (2 g) was added. The reaction
mixture was slowly stirred for 20 min. The resin was removed by
filtration. The solvent was removed in vacuo with a bath
temperature of 25.degree. C. The residue was dissolved in
dichloromethane (10 ml). Ether (200 ml) was added. The mixture was
left at room temperature for 6 h in order to let the formed
precipitate grow old. The precipitate was isolated by decantation
and centrifugation. It was dried in vacuo to give 180 mg of the
title compound. The .sup.1H-NMR spectrum in DMSO-d.sub.6 showed the
presence of a maleimide group.
Step 4: Attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)3
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
Acid to an Anti TLT-1 FAB
##STR00022##
[0750] A solution of an anti-TLT-1 FAB fragment with parts of the
hinge region wherein an unpaired Cys was incorporated (10 mg) in a
phosphate buffer was placed in amicon ultracentrifugation device
with a cut off of 10 kDa. The buffer was changed to a buffer
composed of 100 mM HEPES which had been adjusted to pH 7.3, by
repeated ultracentrifugation at 4000 rpm. After the buffer was
changed, a solution of the protein in the buffer composed of 100 mM
HEPES which had been adjusted to pH 7.3, (36 ml) was obtained. A 1
mg/ml solution of tris(2-carboxyethyl)phosphine hydrochloride (4
ml) was added. The reaction mixture was shaken at 300 rpm at
20.degree. C. for 15 min and left at 20.degree. C. for 45 min. The
reaction mixture was placed in an ultracentrifugation device with a
cut off of 10 kDa. The buffer was changed to a buffer composed of
25 mM HEPES which had been adjusted to pH 7.0 by repeated
ultracentrifugation at 4000 rpm to give a solution of 13.2 ml. A 1
mg/ml solution of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)3
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid (6.4 ml) was added. The reaction mixture was gently shaken at
300 rpm at 20.degree. C. for 15 min and left at 20.degree. C. for
16 h. It was placed in an Amicon ultracentrifugation device with a
cut off of 10 kDa and concentrated by ultracentrifugation at 4000
rpm for 10 min to a volume<5 ml. The solution was subjected to a
size exclusion chromatography on a Superose 75 16/60 GL column (GE
Healthcare) at a flow of 1 ml/min, utilizing a buffer composed of
25 mM TRIS, 150 mM NaCl, which had been adjusted to pH 8.00 as
eluent. Fractions were pooled on the basis of the UV-trace at 280
nm of the chromatogram. The pool (9.9 mg, 13.7 ml), containing the
desired compound as judged by SDS-PAGE and which were devoid of
free PEG reagent as judged by SDS-PAGE utilizing a PEG-specific
staining method (described in Kurfurst, M. M. Analyt. Biochem.
1992, 200, 244-248.) was used in the following step.
Step 5: Immobilized sialidase
[0751] (C. Perfingens type VI-A immobilized on agarose, Sigma:
N-5254, 0.6-1.8 U/ml gel, 1.52 ml) was washed with water (3.times.9
ml) and subsequently with a buffer of 20 mM HEPES, 10 mM
CaCl.sub.2, 0.005% Tween80, 100 mM NaCl, which had been adjusted to
pH 7.5 (3.times.9 ml). A solution of FVIIa (8.9 mg) in a buffer
(6.59 ml) composed of 25 mM Gly-Gly, 10 mM CaCl.sub.2 which had
been adjusted to pH 6.0 was placed in an Amicon ultracentrifugation
device with a cut off of 10 kDa. The buffer was changed to a buffer
of 20 mM HEPES, 10 mM CaCl.sub.2, 0.005% Tween80, 100 mM NaCl,
which had been adjusted to pH 7.5 be repeated centrifugation at
4000 rpm to give a final volume of 6.5 ml. This solution was added
to the immobilized sialidase. The reaction mixture was rolled at
room temperature for 3.5 h.
[0752] The product of the attachment of
N-((3-(.omega.-(3-(2,5-dioxo-2,5-dihydropyrrol-1-yl)propionylamino)3
kDa
PEGyl)propionylamino)acetyl)-O.sup.2-[5']cytidylyl-.xi.-neuraminic
acid to an anti TLT-1 FAB (10 mg) obtained as described in a
preceding step in a buffer (13. 5 ml) consisting of 25 mM TRIS, 150
mM NaCl, which had been adjusted to pH 8.00 was placed in an Amicon
ultracentrifugation device with a cut off of 10 kDa. Buffer
composed of 20 mM histidine, 10 mM CaCl.sub.2, 20% glycerol, 0.02%
Tween 80, 500 mM NaCl which had been adjusted to pH 6.0 was added.
An ultracentrifugation at 4000 rpm for 2 min was applied. Another
portion of buffer composed of 20 mM histidine, 10 mM CaCl.sub.2,
20% glycerol, 0.02% Tween 80, 500 mM NaCl which had been adjusted
to pH 6.0 was added. An ultracentrifugation at 4000 rpm for 10 min
was applied. The reaction product of the reaction with the
immobilized sialidase was added, by filtration to remove the
immobilized sialidase. Another portion of buffer composed of 20 mM
histidine, 10 mM CaCl.sub.2, 20% glycerol, 0.02% Tween 80, 500 mM
NaCl which had been adjusted to pH 6.0 was added. An
ultracentrifugation at 4000 rpm for 10 min was applied to obtain a
total volume of 9 ml. A solution of ST3Gal-III (500 .mu.l) was
added. The reaction mixture is gently shaken at 32.degree. C. for
15 min and thereafter left at 32.degree. C. for 16 h. A 10 mg/ml
solution of CMP-N-acetylneuraminic acid (CMP NeuNAc, 0.70 mg, 0.89
ml) in a buffer of 20 mM histidine, 10 mM CaCl.sub.2, 20% glycerol,
0.02% Tween 80, 500 mM NaCl which had been adjusted to pH 6.0 was
added was added. The reaction mixture was gently shaken at
32.degree. C. for 15 min and thereafter left at 32.degree. C. for 1
h. The reaction mixture was subjected to a size exclusion
chromatography on a Superdex 200 26/60 GL column (GE Healthcare)
with a flow of 2 ml/min utilizing a buffer of 10 mM Histidine, 10
mM CaCl.sub.2, 0.01% Tween 80, 200 mM NaCl which had been adjusted
to pH 6 as eluent. The fractions containing the desired product as
judged by SDS-PAGE on a TRIS-Acetate gel were pooled. Using a molar
absorption of 12.86 at 280 nm on a Nandrop.RTM. apparatus, a yield
of 3.2 mg was found. The result of a SDS-PAGE analysis was in
accordance with the expectation for the desired product.
Example 40
Conjugation of Anti TLT-1-FAB fragment (Fab0084) to FVIIa 407C Via
3 kDa PEG Linker, FVIIa-Fab9015
##STR00023##
[0754] FVIIa 407C (5 mg, 0.55 mg/ml, 9 ml) in 20 mM HEPES, 100 mM
NaCl, 10 mM CaCl2, pH 7.0 was mixed with solutions of glutathione
(reduced, 40 mM, 125 microliter, in HEPES buffer), glutathione
(oxidised, 1.6 mM, 125 microliter, in HEPES buffer),
para-aminobenzamidine (0.5 M, 500 microliter, in HEPES buffer), and
glutaredoxin (Grx2, EC 1.20.4.1, 96 micromolar, 200 microliter).
The volume was adjusted to 10.0 ml, pH was 7.0.
[0755] The resulting mixture was incubated at 32 degrees Celsius
for 5 h.
[0756] EDTA in water (800 microliter, 0.25 M, pH 7.0) was added.
The solution was diluted with desalted water until the conductivity
was reduced to 8.3 mS/cm (20 ml).
[0757] The solution was injected on a pre-conditioned HiTrap Q FF
column (preconditioned in Buffer A, 5 ml column volume).
[0758] Buffer A: 50 mM HEPES, 100 mM NaCl, 1 mM EDTA, 0.01%
Tween-80, pH 7.0
[0759] Buffer B: 50 mM HEPES, 100 mM NaCl, 10 mM CaCl2, 0.01%
Tween-80, pH 7.0
[0760] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with buffer B (10 CV) at 2 ml/min. Elution of the protein of
interest was done by monitoring the absorbance at 280 nm.
[0761] Seven fractions were pooled. Protein concentration in the
combined pool was estimated to be 0.49 mg/ml (abs. 280 nm), volume
7.5 ml, 3.8 mg FVIIa (77.6 nmol).
[0762] A solution of bis-maleimide polyethylene glycol linker (3
kDa, Rapp Polymere Gmbh, Tubingen, Germany, prod. no. 11300-45, lot
no. 1210.764, 70 mg, 23 micromol) in 20 mM HEPES, 100 mM NaCl, 10
mM CaCl.sub.2, pH 7.0 (3.5 ml) was added. The resulting mixture was
incubated at room temperature for 1 h.
[0763] A solution of EDTA in water (250 mM, 900 microliter) was
added to the mixture. pH was adjusted to 7.0. The resulting mixture
was diluted with water until the conductivity was 8.3 mS/cm
reaching a volume of 17 ml.
[0764] The solution was injected on a pre-conditioned HiTrap Q FF
column (preconditioned in Buffer A, 5 ml column volume).
[0765] Buffer A: 50 mM HEPES, 100 mM NaCl, 1 mM EDTA, 0.01%
Tween-80, pH 7.0
[0766] Buffer B: 50 mM HEPES, 100 mM NaCl, 10 mM CaCl2, 0.01%
Tween-80, pH 7.0
[0767] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with buffer B (10 CV) at 2 ml/min. Elution of the protein of
interest was done by monitoring the absorbance at 280 nm.
[0768] The fractions of interest were pooled resulting in a total
volume of 12 ml. The protein concentration was measured (Abs. at
280 nm) to 0.30 mg/ml, 3.6 mg of protein in total.
[0769] A solution of antibody fragment, Fab protein ID 0084 (6.7
mg, 3.21 mg/ml) in HEPES buffer (20 mM HEPES, 1.0 mM CaCl.sub.2,
100 mM NaCl, 0.005% (v/v) Tween-80, pH 7.5) was mixed with a
solution of tris(3-sulfonatephenyl)phosphine hydrate sodium salt
(techn. grade 85% pure, 10 mg/ml, 5 ml, same buffer). The resulting
mixture was incubated for 2 h at room temperature. The mixture was
placed in an Amicon Ultracentrifugal filter device (Millipore
corp., MWCO 10 kDa) and the buffer was exchanged by repetitive
additions of buffer (20 mM HEPES, 1.0 mM CaCl2, 100 mM NaCl, 0.005%
(v/v) Tween-80, pH 7.5) followed by centrifugation.
[0770] The buffer exchanged sample of antibody fragment was mixed
with the linker conjugated FVIIa sample and the resulting solution
was bufferexchanged into a buffer (50 mM HEPES, 100 mM NaCl, 35 mM
CaCl.sub.2, 50 mM benzamidine, 0.01% Tween-80, pH 7.5) and
subsequently concentrated to 7 ml. The mixture was incubated over
night at room temperature. The resulting mixture was analysed using
SDS-PAGE gel electrophoresis.
[0771] Water (8.5 ml), EDTA solution (5.5 ml, 0.25 M), and sodium
hydroxide (1 M) was added to the mixture until pH was 7.2 and the
conductivity measured to 11.0 mS/cm, total volume: 21 ml
[0772] The solution was injected on a pre-conditioned HiTrap Q FF
column (preconditioned in Buffer A, 5 ml column volume).
[0773] Buffer A: 50 mM HEPES, 100 mM NaCl, 1 mM EDTA, 0.01%
Tween-80, pH 7.0
[0774] Buffer B: 50 mM HEPES, 100 mM NaCl, 10 mM CaCl.sub.2, 0.01%
Tween-80, pH 7.0
[0775] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with buffer B (10 CV) at 2 ml/min.
[0776] The selected fractions were concentrated in an Amicon
Ultracentrifugal filter device (Millipore corp., MWCO 10 kDa) and
the buffer was exchanged by repetitive additions of buffer (20 mM
HEPES, 1.0 mM CaCl2, 100 mM NaCl, 0.005% (v/v) Tween-80, pH 7.5)
followed by centrifugation. The concentrated sample (5 ml) was
injected on a preconditioned Superdex Hiload 16/60 column (GE
Healthcare, pre-conditioned in the applied buffer).
[0777] Buffer: 10 mM L-Histidine, 10 mM CaCl.sub.2, 100 mM NaCl,
0.01% Tween80, pH 6.0
[0778] The protein was purified by elution at a flow of 0.8 ml/min
over 2 CV.
[0779] Fractions were selected based on analysis by SDS PAGE gel
electrophoresis (4-12% Bis-Tris acetate, MES running buffer).
[0780] The pool of selected fractions was concentrated using an
Amicon Ultracentrifugal filter device (Millipore corp., MWCO 10
kDa) to a total volume: 2.25 ml. The amount of protein was measured
(abs. 280 nm) to be 1.2 mg (protein conjugate).
[0781] Analysis by SDS PAGE gel electrophoresis (4-12% Bis-Tris
acetate) and (HPC4) Western Blotting against [0782] 1.
Primary--ProteinC-tag Antibody (HPC4) pAb, Rabbit, cot no: A00637
(40 ug). was dissolved in 80 ul milliQ water to concentration of
0.5 mg/ml. Diluted 1:1000 during the blot. [0783] 2.
Secondary--Goat anti-Rabbit IgG antibody (H&L) (HRP), pAb, cat.
No A00098, Lot No 11B000259. Diluted 1:1000 during the blot.
Example 41
Synthesis of
2-[2-[4-[2-(3-hydroxy-6-oxo-xanthen-9-yl)benzoyl]piperazin-1-yl]-2-oxo-et-
hoxy]acetic Acid
##STR00024##
TABLE-US-00024 [0784] Dens Mw Mol N W V Name [g/ml] [g/mol] Ratio
[mmol] [g] [ml] 1 436.899 1 121.31 53 2 116.074 1 121.31 14.081
Product: 516.512 C28H24N2O8
[0785]
6-hydroxy-9-[2-(piperazin-4-ium-1-carbonyl)phenyl]xanthen-3-one
(prepared as described in Chang et al., J. Am. Chem. Soc., 2007,
129, 8400) was suspended in a mixture of sat. aq. sodium
bicarbonate (50 ml) and tetrahydrofuran (50 ml). The mixture was
stirred for 10 minutes. Diglycolic anhydride is added. After 3 h,
additional diglyoclic anydride (500 mg) was added. The mixture is
stirred for 20 h. The mixture was acidified with fuming
hydrochloric acid to pH 1. Dichloromethane (100 ml) and
hydrochloric acid (1 M, 100 ml) were added. Brine (100 ml) and
solid sodium chloride was added. A massive amount of solid was
observed. The solid was isolated by filtration, washed with water,
and dried under vacuum for several days. LC-MS: 517.1641
[M+H].sup.+.
Example 42
Synthesis of Fluorescent Cytidyl Monophosphate Neuraminic Acid
Derivative,
(2R,5R,6R)-2-[[(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydro-
xy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl]oxy-4-hydroxy-5-[[2-[[5-
-[2-[2-[[2-[2-[4-[2-(3-hydroxy-6-oxo-xanthen-9-yl)benzoyl]piperazin-1-yl]--
2-oxo-ethoxy]acetyl]amino]ethyldisulfanyl]ethylamino]-5-oxo-pentanoyl]amin-
o]acetyl]amino]-6-[(2R)-1,2,3-trihydroxypropyl]tetrahydropyran-2-carboxyli-
c acid
##STR00025##
TABLE-US-00025 [0786] Dens Mw Mol n W V Name [g/ml] [g/mol] Ratio
[mmol] [g] [ml] Cysteamine 225.204 1 8.881 2 dihydrochloride
Glutaric anhydride 114.102 1 8.881 1.013 Fluorescent 516.512 0.218
1.936 1 Oxyma Pure 114.105 0.3 2.664 0.304 diisopropyl- 0.815
126.203 0.5 4.44 0.56 0.688 carbodiimide Product: 764.88
C37H40N4O10S2 Product: 1376.341 C57H70N9O25PS2
[0787] Cystamine dihydrochloride was dissolved in 1 M NaOH (aq.),
50 ml. The solution was extracted with DCM (5.times.30 ml). The
combined org. phases were dried (Na.sub.2SO.sub.4), filtered, and
concentrated in vacuo.
[0788] The diamine was dissolved in acetonitril (30 ml). A solution
was added dropwise solution of anhydride in acetonitril (30 ml) to
the solution. The resulting mixture was stirred for 15 minutes. The
formed solid was allowed to settle for 1 h. The solvent was
decanted off.
[0789]
2-[2-[4-[2-(3-hydroxy-6-oxo-xanthen-9-yl)benzoyl]piperazin-1-yl]-2--
oxo-ethoxy]acetic acid, Oxyma, and DIC were mixed in DMF (25 ml).
The mixture was stirred for 1 h.
[0790] The formed amino acid was dissolved in sat. aq. sodium
bicarbonate (25 ml). The resulting mixture was stirred over night.
DCM (50 ml) and aq. sodium hydroxide (50 ml) were added. The phases
were separated. The organic phase was extracted with aq. sodium
hydroxide (3.times.50 ml). The combined aqueous extracts were
acidified by addition of hydrochloric acid (fuming) causing
extensive precipitation. The mixture was filtered. The isolated
slurry was redissolved in DMF and concentrated in vacuo.
[0791] The crude isolated compound and Oxyma were dissolved in DMF
(20 ml). DIC (1.5 ml) was added. The mixture was stirred for 2 h. A
solution of GSC in sat. aq. sodium bicarbonate (10 ml) was added.
The mixture was stirred over night. DCM (50 ml) was added. The
phases were separated. The org. phase was extracted with sat. aq.
sodium bicarbonate (2.times.5 ml). The combined aqueous phases were
purified using reversed phase HPLC (0-50% MeCN in water, 50 mM
NH.sub.4HCO.sub.3, 5 cm column). LC-MS: 688.6752 [M+H].sup.2+.
Analytical HPLC and LC-MS indicated that the compound was not pure.
It was, however, used as is.
Example 43
Conjugation of Anti TLT-1-FAB fragment (Fab0084) to FVIII,
FVIII-Fab0247
##STR00026##
[0793] B-domain deleted factor VIII (turoctocoq alpha, Novo Nordisk
A/S, 1.92 ml, 4.2 mg/ml) in imidazol buffer (20 mM Imidazol, 10 mM
CaCl.sub.2, 0.02% Tween 80, 150 mM NaCl, 1 M glycerol, pH 7.3) and
sialidase (recombinant, Arthrobactor Ureafaciens sialidase, 3.2 U)
were mixed and left for 1 hour at ambient temperature. The sample
was diluted to 25 ml with buffer.
[0794] The solution was injected on a pre-conditioned monoQ column
(pre-conditioned in Buffer A, 5 ml column volume).
[0795] Buffer A: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3
[0796] Buffer B: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
1M NaCl, 1 M glycerol, pH7.3.
[0797] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with a gradient of buffer B (2 CV eq+5 wash out unbound
sample+2 CV 0-20% B+10 CV 20% B+10 CV 100% B) at 1 ml/min. Elution
of the protein of interest was done by monitoring the absorbance at
280 nm.
[0798] The isolated N,O-asialo BDD-FVIII (0.98 mg/ml, 5 mg) was
mixed with Fluorescent cytidyl monophosphate neuraminic acid
derivative and recombinant sialyltransferase (His-ST3Gall). The
resulting mixture was incubated over night at room temperature in
the dark.
[0799] The sample was diluted to 40 ml with buffer A: 20 mM
Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80, 25 mM NaCl, 1M
glycerol, pH 7.3.
[0800] The solution was injected on a pre-conditioned monoQ column
(pre-conditioned in Buffer A, 5 ml column volume).
[0801] Buffer A: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3.
[0802] Buffer B: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
1M NaCl, 1 M glycerol, pH 7.3.
[0803] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with a gradient of buffer B (2 CV eq+5 wash out unbound
sample+2 CV 0-20% B+10 CV 20% B+10 CV 100% B) at 1 ml/min. Elution
of the protein of interest was done by monitoring the absorbance at
280 nm.
[0804] The selected fractions were pooled and incubated with
cytidylmonophosphate N-acetylneuraminic acid and sialyltranferase
(ST3GalIII) for 30 minutes. The mixture was diluted to 35 ml with
buffer A.
[0805] The solution was injected on a pre-conditioned monoQ column
(pre-conditioned in Buffer A, 5 ml column volume).
[0806] Buffer A: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3.
[0807] Buffer B: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
1M NaCl, 1 M glycerol, pH 7.3.
[0808] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with a gradient of buffer B (2 CV eq+5 wash out unbound
sample+2 CV 0-20% B+10 CV 20% B+10 CV 100% B) at 1 ml/min. Elution
of the protein of interest was done by monitoring the absorbance at
280 nm.
[0809] The selected fractions were pooled and evaluated by SDS PAGE
gel electrophoresis (4-12% Bis-Tris acetate, reduced and
non-reduced).
[0810] The isolated fractions were mixed with buffer (15 ml)
containing tris(carboxyethyl)phosphine, TCEP (20 mM Imidazol, 10 mM
CaCl.sub.2, 0.02% Tween 80, 25 mM NaCl, 1M glycerol, pH 7.3, 0.7 mM
TCEP). The resulting mixture was incubated for 20 minutes. The
solution was injected on a pre-conditioned monoQ column (5/50 GL,
preconditioned in Buffer A with TCEP).
[0811] Buffer A1: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3, 0.7 mM TCEP).
[0812] Buffer A2: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3).
[0813] Buffer B1: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
1 M NaCl, 1M glycerol, pH 7.3).
[0814] 10 CV eq i A1, 5 wash out unbound sample i A1, 30CV in 100%
A1, 10 CV in 100% A2, 15 CV 100% B1
[0815] The immobilised protein was washed with Buffer A1 (45 CV)
followed by Buffer A2 (10 CV) using a Akta purifier 100
chromatography station. The protein was eluded with buffer B (15 CV
100% B) at 1 ml/min. Elution of the protein of interest was done by
monitoring the absorbance at 280 nm.
[0816] The selected fractions were pooled and analysed by SDS-PAGE
(Tris-acetate).
[0817] The isolated factor VIII compound was diluted with Buffer A
and injected on a pre-conditioned monoQ column (5/50 GL,
pre-conditioned in Buffer A).
[0818] A flow of Buffer A containing 4.8 mM BM(PEG).sub.2
(1,8-Bismaleimidodiethyleneglycol, Pierce/Thermo scientific) was
maintained for 100 minutes. The protein was washed and eluded using
the following protocol: 10 CV A1, 25CV in buffer A2 (bismaleimide)
at 0.25 ml/min (100 min), 10CV buffer A1, 10CV 100% B1.
[0819] Anti-TLT-1 antibody fragment, 0084, was buffer exchanged
using an Amicon Ultracentrifugal filter device MWCO 30 kDa into
HEPES buffer (20 mM HEPES+1 mM CaCl.sub.2, 100 mM NaCl+0.005%
Tween80, pH: 7.50). Concentration measured to be: 3.44 mg/ml, 2
mg): Tris(3-sulfonatephenyl)phosphine hydrate sodium salt (Alfa
Aesar, technical grade 85%) was added to a resulting concentration
of 12.5 mM. The resulting mixture was incubated at room temperature
for 2 h. The antibody fragment was buffer exchanged using an Amicon
Ultracentrifugal filter device MWCO 30 kDa into imidazol buffer (20
mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80, 25 mM NaCl, 1M
glycerol, pH 7.3).
[0820] The solutions of factor VIII and antibody fragment were
mixed and concentrated to 2 ml. The resulting solution was
incubated over night at room temperature.
[0821] The solution was injected on a pre-conditioned monoQ column
(pre-conditioned in Buffer A, 5 ml column volume).
[0822] Buffer A: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
25 mM NaCl, 1M glycerol, pH 7.3.
[0823] Buffer B: 20 mM Imidazol, 10 mM CaCl.sub.2, 0.02% Tween 80,
1M NaCl, 1 M glycerol, pH 7.3.
[0824] The immobilised protein was washed with Buffer A (5 CV)
using a Akta purifier 100 chromatography station. The protein was
eluded with a gradient of buffer B (2 CV eq+5 wash out unbound
sample+2 CV 0-20% B+10 CV 20% B+10 CV 100% B) at 1 ml/min. Elution
of the protein of interest was done by monitoring the absorbance at
280 nm.
[0825] The selected fractions were pooled and concentrated. The
protein was injected on a pre-conditioned Superdex 200 16/60 PG
column (pre-conditioned in Buffer A).
[0826] Buffer A: Histidine (1.5 g, 1.5 mg/ml), CaCl.sub.2*H2O (376
mg, 0.37 mg/ml), NaCl (18 g, 18 mg/ml), Sucrose (3 g, 3 mg/ml),
Tween 80 (100 mg, 0.1 mg/ml), Diluted to 1000 ml with MQ, adjust to
pH 7.0.
[0827] Fractions were selected based on analysis by SDS-PAGE and
anti-HPC4 Western blotting.
Example 44
Conjugation of Anti TLT-1-FAB Fragment (Fab0084) to FIX
##STR00027##
[0829] Factor IX (50 microliter), Sialyltransferase3 (10
microliter), Fluorescent cytidyl monophosphate neuraminic acid
derivative; tip of a spatula) are mixed. The mixture is incubated
at 32 degrees Celsius for 24 hours.
[0830] The end concentrations are: Factor IX: 0.33 mg/ml, ST3Gal3:
0.08 mg/ml
[0831] Analysed by SDS-PAGE (fluorescense response and coomassie
blue stained).
[0832] Factor IX and an antibody fragment are conjugated using the
methods described herein, i.e, reduction mediated by a phosphine or
glutathion, coupling to a linker entity, and conjugation followed
by purification and analysis.
Example 45
FVIIa-Fab9015 is Superior to rFVIIa in Reducing Tail-Bleeding in
Transient Haemophilic Mice
[0833] Humanized TLT-1 knock-out/knock-in (KOKI) mice were made
transiently haemophilic by administration of a monoclonal
FVIII-antibody. Five minutes before induction of tail-bleeding, the
mice were pre-treated with 20, 5 or 0.8 nmol/kg FVIIa-Fab9015
(3.625 ml/kg), 20 nmol/kg rFVIIa or vehicle. Tail-bleeding was
induced by transection 4 mm from the tail-tip, and the resulting
bleeding was observed for 30 minutes. Platelet counts were obtained
initially and 30, 60 and 120 minutes after induction of
tail-bleeding.
[0834] In order to be able to show superiority of FVIIa-Fab9015, we
used a dose of rFVIIa (20 nmol/kg.about.1 mg/kg) that was not
expected to have significant effect on the bleeding.
[0835] TLT-1-FAb-FVIIa dose-dependently reduced blood loss and
bleeding time, reaching statistical significance at 20 and 5
nmol/kg. Moreover 20 nmol/kg FVIIa-Fab9015 was significantly more
efficacious compared to 20 nmol/kg rFVIIa (FIG. 15).
[0836] No significantly changes in platelet count was observed
within 2 hours of treatment in any of the treatment groups (FIG.
16).
[0837] In conclusion, FVIIa-Fab9015 was superior to rFVIIa in
reducing haemophilic tail-bleeding in TLT-1 KOKI mice. No signs of
adverse effects, eg. decrease in platelet counts, were
observed.
Example 46
Enhancement of Thrombin Generation by Localization of rFVIIa to The
Surface of Activated Platelets Through Binding to Surface Expressed
TLT-1 Under Haemophilia A Like Conditions
[0838] FVIIa-Fab9015 was tested in a thrombin generation assay. In
brief, human platelet rich plasma (PRP) obtained by centrifugation
of citrated human whole blood at 220 g for 20 min. The upper phase
containing platelets was collected and the remaining sample was
centrifuged at 2500 g for 10 min to obtain platelet poor plasma
(PPP) used to adjust the platelet concentration to be used at a
final concentration of 150000 plts/.mu.l. The PRP was made
haemophilic by 30 min incubation with a sheep anti-human FVIII
polyclonal antibody (0.1 mg/ml) (HTI #Z0429). Platelets were
activated with either protease activated recertor-1 activation
peptide (SFLLRN; Bachem #H-2936) or a combination of the peptide
and the GPVI activating snake venom Convulxin (Pentapharm #119-02).
Generated thrombin was measured using a fluorogenic method from
Thrombinoscope.RTM.. PRP, FluCa reagent and compound were mixed and
added to 96-well Nunc Microwell round bottom well plates. The
reaction was started by the addition of platelet activator and the
fluorescent signal from the substrate was detected in a
ThermoFisher Fluoroskan plate reader (Fisher Scientific). The
thrombin concentration was calculated using a Thrombin calibrator
provided by Thrombinoscope according to their instructions.
[0839] The results showed an increased potency of FVIIa-Fab9015
compared to rFVIIa (FIG. 17A). Furthermore the results revealed
that this increase in potency was dependent on the activation stage
of the platelets. FIG. 18 shows the increased thrombin generation
capacity when the platelets were activated with SFLLRN (10 .mu.M)
and that full potential was reached when the platelets were
activated with a combination of SFLLRN (30 .mu.M) and Convulxin
(100 ng/ml). When activating the platelets with this combination of
activators FVIIa-Fab9015 showed an approximately four times
increased potency, measured as peak thrombin generation, compared
to rFVIIa at the two concentrations tested (5 and 25 nM) (FIGS. 17A
and 17B, respectively). This increase in thrombin generation
capacity was completely dependent on FVIIa-Fab9015 binding to TLT-1
on the surface of the activated platelet since pre-incubation with
soluble TLT-1 fully reversed the enhancement (FIG. 19).
Example 47
Enhancement of Thrombin Generation by Localization of rFIX to the
Surface of Activated Platelets Through Binding to Surface Expressed
TLT-1 Under Haemophilia B Like Conditions
[0840] FIX-Fab0155 was tested in a thrombin generation assay and
compared to rFIX (Benefix.RTM.). Human platelets were isolated from
fresh citrate stabilized whole blood. One part ACD-solution (2.5%
tri-sodium citrate, 1.5% citric acid and 2% D-glucose) was added to
five parts of blood before centrifugation at 220 g for 20 min to
obtain platelet rich plasma. The upper phase was collected and
transferred to a new cone shaped tube and spun at 500 g for 15 min.
The plasma was removed and the pellet was dissolved in Hepes-buffer
(10 mM Hepes, 137 mM NaCl, 2.7 mM KCl, 1.7 mM MgCl.sub.2, 5 mM
D-glucose, 0.4 mM NaH.sub.2PO.sub.4; pH 6.5) supplemented with
prostaglandin E1 (5 .mu.g/ml). After a second centrifugation at 500
g for 15 min the supernatant was discarded and the washed platelets
were dissolved in factor IX deficient plasma (Geroge King
Bio-medical, Inc.) and the platelet concentration was adjusted to
300000 plts/.mu.l. In the thrombin generation assay when agonists,
factor IX variants and FluCa reagent (Thrombinoscope.RTM.) were
added to 96-well Nunc Microwell round bottom well plates together
with the factor IX deficient plasma containing platelets the final
platelet concentration was 150000 plts/.mu.l. The platelets were
activated with a combination of protease activated recertor-1
activation peptide (SFLLRN; Bachem #H-2936) and the GPVI activating
snake venom Convulxin (Pentapharm #119-02). Generated thrombin was
measured by a fluorogenic method from Thrombinoscope.RTM. in which
the fluorescent signal from the thrombin cleaved substrate was
detected in a ThermoFisher Fluoroskan plate reader (Fisher
Scientific). The thrombin concentration was calculated using a
thrombin calibrator provided by Thrombinoscope.RTM. according to
their instructions.
[0841] The results showed an increased potency at 1 nM of
FIX-Fab0155 compared to rFIX (FIG. 20) when the platelets were
activated with a combination of SFLLRN (30 .mu.M) and Convulxin
(100 ng/ml). Furthermore the results revealed that this increase in
potency was dependent on expression of TLT-1 on the platelets since
soluble TLT-1 (100 nM) antagonised the enhanced effect.
Example 48
Purification and Characterization of Wild-Type FVIIa (SEQ ID NO:
156), FVIIa 407C (SEQ ID NO: 181) and FVIIa-Fab5001 (SEQ ID NO:
180)
[0842] Purification of FVIIa proteins were conducted using a
capture affinity chromatography method based on the anti-FVIIa
F1A2-Sepharose 4B resin, which is a resin (base affinity gel from
GE Healthcare) with a coupled antibody, developed at Novo Nordisk,
that binds specifically the FVIIa Gla domain (for details see
reference Jurlander B, Thim L, Klausen N K, Persson E, Kjalke M,
Rexen P, Jorgensen TB, Ostergaard PB, Erhardtsen E, Bjorn S E
(2001) Recombinant activated factor VII (rFVIIa): characterization,
manufacturing, and clinical development. Semin Thromb Hemost.
27:373-84). The purification was conducted using an AktaExplorer
chromatography system (GE Healthcare, cat. no. 18-1112-41). The
buffer systems used for the purification step were an equilibration
buffer composed of 10 mM Histidine, pH 6.0, 5 mM CaCl.sub.2, 25 mM
NaCl and 0.01% (v/v) Tween-80, a wash buffer composed of 10 mM
Histidine, pH 6.0, 5 mM CaCl.sub.2, 1.0 M NaCl and 0.01% (v/v)
Tween-80, and an elution buffer composed of 50 mM Histidine, pH
6.0, 15 mM EDTA. Cell supernatants were adjusted with 5 mM
CaCl.sub.2 final concentration and applied onto a pre-equilibrated
anti-HPC4 column. The column was washed with 5-10 column volumes of
equilibration buffer, 5-10 column volumes of wash buffer and last
with 5-10 column volumes of equilibration buffer. The FVIIa
proteins were eluted isocratically in approximately 5 column
volumes of elution buffer.
[0843] Further purifications of capture eluates with low purities
of the FVIIa variants (<90% based on a SEC-HPLC method setup on
an Agilent 1100/2100 system and using a TSK G3000SW.sub.XL column
(From Tosho) and a PBS running buffer) were conducted using 1) an
anion-exchange chromatography (AIEC) based on a Poros HQ50 resin
(from Applied Biosystems) and 2) preparative gel filtrations using
pre-packed Superdex200 columns (from GE Healthcare).
[0844] The buffer systems used for the AIEC purification step was
an equilibration buffer composed of 10 mM Hepes, pH 5.9 and 150 mM
NaCl, a wash buffer composed of 10 mM Hepes, pH 5.9 and 50 mM NaCl,
and an elution buffer composed of 10 mM Hepes, pH 5.9, 50 NaCl and
30 mM CaCl.sub.2. The capture eluate was diluted 1:6 (v:v) before
applying it onto a pre-equilibrated Poros HQ50 column. The column
was washed with 5-10 column volumes of equilibration buffer and
5-10 column volumes of wash buffer before eluting the FVIIa
proteins isocratically in approximately 2-5 column volumes of
elution buffer.
[0845] The buffer systems used for the gel filtration steps was a
running buffer composed of 10 mM Histidine, pH 6.0, 10 mM
CaCl.sub.2, 100 mM NaCl and 0.01% Tween 80. The FVIIa proteins were
collected as symmetric peaks in approx 0.02-0.08 column
volumes.
[0846] Activations of the purified FVIIa preparations were
conducted using a resin composed of plasma-derived FXa (from Enzyme
Research Lab.) coupled to activated CNBr-Sepharose 4 FF bead (from
GE Healthcare).
[0847] The FVIIa proteins were analyzed using SDS-PAGE/Coomassie
and intact molecular mass determinations performed using a Liquid
Chromatography Electrospray Ionisation Time-of-Flight Mass
Spectrometry method setup on an Agilent 6210 instrument and a
desalting column MassPREP (from Waters) with an equilibration
buffer composed of 0.1% Formic acid in LC-MS graded-H2O and an
elution buffer composed of 0.1% Formic acid in LC-MS graded-ACN.
All FVIIa variants and wild-type purified displayed intact
molecular masses of .about.50 kDa. Based on intact-mass
SDS-PAGE/Coomassie and LC-MS analyses using reductive conditions,
chain identifications of FVIIa-Fab5001 fusion were performed.
[0848] Based on SEC-HPLC analyses, all FVIIa preparations displayed
a purity of >90-99% and appeared highly homogenous.
Example 49
Autoactivation of FVII-Fab5001 Using a Proteolytic Assay in the
Presence of Soluble Tissue Factor
[0849] Autoactivation was determined as the ability to activate FX
in the presence of soluble Tissue Factor (sTF). The protein was
diluted in 50 mM HEPES (pH 7.4), 100 mM NaCl, 10 mM CaCl.sub.2, 1
mg/mL BSA, and 0.1% (w/v) PEG8000. The kinetic parameters for FX
activation were determined by pre-incubating 5 .mu.M of the
FVII-Fab5001 (n=2) with 100 nM sTF and 25 .mu.M PC:PS phospholipids
(Haematologic technologies) for 10 min. 30 nM FX was then added in
a total reaction volume of 100 .mu.L in a 96-well plate and the
reaction allowed to incubate for 20 min at room temperature. After
incubation, the reaction was quenched by adding 50 .mu.L stop
buffer (50 mM HEPES (pH 7.4), 100 mM NaCl, 80 mM EDTA) followed by
the addition of 50 .mu.L 2 mM S-2765. Finally, the absorbance
increase was measured continuously at 405 nM in a Spectramax 190
microplate reader. The k.sub.cat/K.sub.m values were determined by
fitting the data to a revised form of the Michaelis Menten equation
([S]<K.sub.m) using linear regression. The amount of FXa
generated was estimated from a FXa standard curve.
[0850] The zymogen fusion protein FVII-Fab5001 showed 38%
proteolytic activity relative to that of wtFVIIa, being a result of
autoactivation of the protein in the presence of sTF, see FIG.
21).
Example 50
Lack of Anti-Aggregatory Effect of Anti-TLT-1 Antibodies, mAb0023,
mAb0051, mAb0061 and mAb0062
[0851] The anti-aggregatory effect of anti-TLT-1 antibodies was
tested in human platelet rich plasma (PRP). The PRP was obtained by
a 200 g centrifugation for 15 min of heparin stabilized human whole
blood. The upper phase containing platelets was collected and the
remaining sample was centrifuged at 1500 g for 10 min to obtain
platelet poor plasma (PPP) which was used as a reference sample in
the aggregation measurements. The PRP was incubated 3 min at
37.degree. C. in the Platelet Aggregation Profiler (PAP-8)
instrument (Bio/Data Corporation, Horsham, Pa.). A stable baseline
was recorded before the addition of anti-TLT-1 antibodies (10 nM)
or irrelevant control antibody (10 nM) to the PRP. The platelets
were activated 3 min after the addition of the antibodies with
protease activated receptor-1 (PAR-1) activating peptide SFLLRN (1
or 10 .mu.M) (Bachem).
[0852] The results showed no inhibitory effect of the antibodies
(10 nM) (mAb0023, mAb0051, mAb0061 and mAb0062) compared to
irrelevant control antibody. Platelet aggregation was initiated
with either a high (10 .mu.M) or an intermediate (1 .mu.M)
concentration of SFLLRN. The data shows that the antibodies did not
inhibit aggregation at neither of the SFLLRN concentrations. In
conclusion, these data shows that the antibodies do not induce nor
inhibit platelet function measured as aggregation.
Example 51
Effect of FIX-mAb0145 on TF-Induced Fibrin Clot Formation in Human
Whole Blood (HWB) from a Normal Donor Measured by
Thrombelastography (TEG)
[0853] Citrated-stabilized human whole blood (HWB) is drawn from
normal donors. Hemophilia-like conditions are obtained by
incubation of HWB with 10 .mu.g/ml anti-FVIII anti-body (Sheep
anti-Human Factor VIII; Hematologic Technologies Inc) for 30 min at
room temp. Clot formation is measured by thrombelastography (5000
series TEG analyzer, Haemoscope Corporation, Niles, Ill., USA).
Various concentrations (0; 0.2; 1.0; 5.0 and 10 nM) of FIX-mAb0145
or (0; 0.2; 5.0 and 10 nM) of rFIX (Novo Nordisk A/S) are added to
"hemophilia-like" citrated HWB. Clotting in is initiated when 340
.mu.l of normal or "hemophilia-like" HWB is transferred to a
thrombelastograph cup containing 20 .mu.l 0.2 M CaCl.sub.2 with
0.03 .mu.M lipidated TF (Innovin.RTM., Dade Behring GmbH (Marburg,
Germany). The TEG trace is followed continuously for up to 120 min.
The following TEG variables are recorded: R time (clotting time
i.e. the time from initiation of coagulation until an amplitude of
2 mm was obtained), .alpha.-angle (clot development measured as the
angle between the R value and the inflection point of the TEG
trace), K (speed of clot kinetics to reach a certain level of clot
strength, amplitude=20 mm), and MA (maximal amplitude of the TEG
trace reflecting the maximal mechanical strength of the clot). FIG.
23 shows R time values determined from individual TEG traces.
[0854] The R time obtained from TEG traces with normal HWB and
"hemophilia" blood supplemented with various concentrations of
FIX-mAb0145 or rFIX are shown in FIG. 23. HWB from a normal donor
showed a R time of 980 sec which was prolonged to 5475 sec when the
blood was made "haemophilia like" by the addition of a FVIII
neutralizing antibody. FIX-mAb0145 shortened R-time clotting in a
concentration dependent manner in contrast to rFIX which was
without a significant effect when added as a control at equivalent
concentrations. All data are obtained from one representative
donor.
[0855] FIX-mAb0145 is observed to normalize clotting of
"hemophilia-like HWB" in a concentration dependent manner. Thus
surprisingly the results show that conjugation of rFIX to an
antibody against TLT-1, which target rFIX to the surface of
activated platelets, provides it with a FVIII-independent
by-passing activity resulting in improved procoagulant
activity.
Example 52
Enhancement of Thrombin Generation by Localization of rFVIIa to The
Surface of Activated Platelets Through Binding to Surface Expressed
TLT-1 Under Haemophilia A Like Conditions
[0856] FVIIa-Fab9015, FVIIa-Fab1029 and FVIIa-Fab1001 at 25 nM were
tested in a thrombin generation assay. In brief, human platelet
rich plasma (PRP) was obtained by centrifugation of citrated human
whole blood at 220 g for 20 min. The upper phase containing
platelets was collected and the remaining sample was centrifuged at
2500 g for 10 min to obtain platelet poor plasma (PPP) used to
adjust the platelet concentration to a final concentration of
150000 plts/.mu.l. The PRP was made haemophilic by 30 min
incubation with a sheep anti-human FVIII polyclonal antibody (0.1
mg/ml) (HTI #Z0429). Platelets were activated with a combination of
protease activated recertor-1 (PAR-1) activation peptide (30 .mu.M)
(SFLLRN; Bachem #H-2936) and the GPVI activating snake venom
Convulxin (100 ng/ml) (Pentapharm #119-02). Generated thrombin was
measured using a fluorogenic method from Thrombinoscope.RTM. in
which PRP, FluCa reagent and test compound were mixed and added to
96-well Nunc Microwell round bottom well plates (Nunc #268152). The
reaction was started by the addition of platelet activators and the
fluorescent signal from the substrate was detected in a
ThermoFisher Fluoroskan plate reader (Fisher Scientific). The
thrombin concentration was calculated using a Thrombin calibrator
provided by Thrombinoscope.RTM. according to their
instructions.
[0857] The results showed an increased potency of all three
proteins, FVIIa-Fab9015, FVIIa-Fab1029 and FVIIa-Fab1001, compared
to rFVIIa. FVIIa-Fab9015 and FVIIa-Fab1001 (25 nM) showed an
approximately four times increased potency whereas FVIIa-Fab1029
(25 nM) had approximately a twofold increased potency measured as
peak thrombin generation, compared to rFVIIa (25 nM) (FIG. 24).
Example 53
Purification and Characterization of Recombinantly Expressed FIX
(SEQ ID 161), FIX-Anti-TLT-1 Fab and Mab Fusion Protein
(FIX-Fab0155 and FIX-Mab0145)
[0858] Purification of said FIX proteins were conducted using a
capture affinity chromatography method based on the anti-FIX
A3B6-Sepharose 4 FF resin, which is a resin (base affinity gel from
GE Healthcare) with a coupled antibody, developed at Novo Nordisk,
that binds specifically to the FIX Gla domain (see reference
Ostergaard et al. (2011), Blood 118: 2333-41). The purification was
conducted using an AktaExplorer chromatography system (GE
Healthcare, cat. no. 18-1112-41). The buffer systems used for the
purification step were an equilibration buffer composed of 20 mM
Tris, 1 mM CaCl.sub.2, 100 mM NaCl, 0.01% (v/v) Tween 80 pH 7.5, a
wash buffer composed of 20 mM Tris, 1 mM CaCl.sub.2, 2.0 M NaCl,
0.01% (v/v) Tween 80 pH 7.5 and an elution buffer composed of 20 mM
Tris, 20 mM EDTA, 50 mM NaCl, 0.01% (v/v) Tween 80 pH 7.5. Cell
supernatants were adjusted with 5 mM CaCl.sub.2 final concentration
and applied onto a pre-equilibrated A3B6-Seph 4 FF column. The
column was washed with 5-10 column volumes of equilibration buffer,
5-10 column volumes of wash buffer and last with 5-10 column
volumes of equilibration buffer. The FIX fusion proteins were
eluted isocratically in approximately 5 column volumes of elution
buffer.
[0859] The FIX proteins were analyzed using SDS-PAGE/Coomassie and
intact molecular mass determinations performed using a Liquid
Chromatography Electrospray Ionisation Time-of-Flight Mass
Spectrometry method setup on an Agilent 6210 instrument and a
desalting column MassPREP (from Waters) with an equilibration
buffer composed of 0.1% Formic acid in LC-MS graded-H2O and an
elution buffer composed of 0.1% Formic acid in LC-MS graded-ACN.
Based on intact-mass SDS-PAGE/Coomassie and LC-MS analyses using
reductive conditions, chain identifications of the FIX proteins
were performed. Based on SEC-HPLC analyses, all FIX fusion protein
preparations displayed a purity of >85-99% and appeared highly
homogenous.
Example 54
Production of Recombinant Expression of FVIIa Wild-Type (SEQ ID NO:
157) and FVIIa-407C (SEQ ID NO:181)
[0860] Said variant and wild-type FVIIa were produced as described
in patent 02/077218 and Jurlander et al. (2001), Semin Thromb
Hemost. 27:373-84. More specifically, the FVIIa molecules were
expressed in adherent BHK cell lines. The growth medium employed
was a DMEM/F12 medium variant with 5 mg/L vitamin K1 and 10% fetal
bovine serum (2% during production). Briefly, the cells were
propagated in vented T-175 flasks, 2-layer and 10-layer cell
factories incubated at 37.degree. C. and 5% CO2. At confluency,
cells were dissociated using TrypLE.TM. Express (GIBCO cat. no.
12604-013) prior to passaging to the next step. The production
phase was performed as a repeated batch culture in a 15 L
bioreactor with microcarriers (5 g/L, Cytodex 3, GE Life Sciences).
pH was controlled at an upper limit of 7.2 by adding CO2 and at a
lower limit of 6.8 by adding Na.sub.2CO.sub.3. Dissolved oxygen
concentration was kept above 50% of saturation in air by sparging
with oxygen. Temperature was maintained at 36.5.degree. C.
Agitation was at 50-70 rpm. Harvesting/medium exchanges were
performed to maintain a glutamine concentration above 1 mM. One
hour before a medium exchange, agitation was stopped to allow
microcarriers (with cells attached) to settle at the bottom of the
reactor. Thereafter, approximately 80% of the volume was harvested
before filling up with fresh medium to 100% working volume. Cell
harvests were withdrawn and clarified by a filter train consisting
of two disposable capsule filters (3 .mu.m Clarigard, Opticap XL10,
Millipore, cat. no. K030A10HH1; 0.22 .mu.m Durapore, Opticap XL10,
Millipore, cat. no. KVGLS10HH1) prior to purification.
Example 55
Enhancement of Thrombin Generation by Localization of rFVIIa to The
Surface of Activated Platelets Through Binding to Surface Expressed
TLT-1 Under Haemophilia A Like Conditions
[0861] A FVIIa-Fab5001 was tested in a thrombin generation assay
and compared to rFVIIa in factor VIII deficient plasma containing
washed human platelets. To isolate human platelets, one part
ACD-solution (2.5% tri-sodium citrate, 1.5% citric acid and 2%
D-glucose) was added to five parts of blood before centrifugation
at 220 g for 20 min to obtain platelet rich plasma. The upper phase
was collected and transferred to a new cone shaped tube and spun at
500 g for 15 min. The plasma was removed and the pellet was
dissolved in Hepes-buffer (10 mM Hepes, 137 mM NaCl, 2.7 mM KCl,
1.7 mM MgCl.sub.2, 5 mM D-glucose, 0.4 mM NaH.sub.2PO.sub.4; pH
6.5) supplemented with prostaglandin E1 (5 .mu.g/ml). After a
second centrifugation at 500 g for 15 min the supernatant was
discarded and the washed platelets were dissolved in factor VIII
deficient plasma (Geroge King Bio-medical, Inc.) and the platelet
concentration was adjusted to 300000 plts/.mu.l. In the thrombin
generation assay when agonists, factor IX variants and FluCa
reagent (Thrombinoscope.RTM.) were added to 96-well Nunc Microwell
round bottom well plates together with the factor IX deficient
plasma containing platelets the final platelet concentration was
150000 plts/.mu.l. The platelets were activated with a combination
of protease activated recertor-1 activation peptide (SFLLRN; Bachem
#H-2936) and the GPVI activating snake venom Convulxin (Pentapharm
#119-02). Generated thrombin was measured by a fluorogenic method
from Thrombinoscope.RTM. in which the fluorescent signal from the
thrombin cleaved substrate was detected in a ThermoFisher
Fluoroskan plate reader (Fisher Scientific). The thrombin
concentration was calculated using a thrombin calibrator provided
by Thrombinoscope.RTM. according to their instructions. The results
showed an increased potency of the FVIIa-Fab5001 compared to
wild-type rFVIIa (FIG. 25). Furthermore the results revealed that
this increase in potency was dependent on platelet activation.
Activating the platelets with a combination of SFLLRN (301 .mu.M)
and Convulxin (100 ng/ml), FVIIa-Fab5001 (25 nM) showed an
approximately four times increased potency, measured as peak
thrombin generation, compared to wild-type rFVIIa (25 nM).
Example 56
SPR-Analysis of FVIIa-Fab1001 and FVIIa-Fab5001 Binding to TLT1
[0862] SPR-analysis of FVIIa-Fab1001 binding to TLT1. FVIIa-Fab1001
binds TLT-1 as tested by SPR analysis in a Biacore T200
instrument.
[0863] Materials used are shown in Table 18.
TABLE-US-00026 TABLE 18 Reagent Source His tagged human TLT1
Example 1 FVIIa-Fab1001 Example 39 Anti 6X his mAb R&D #MAB050
0.5 mg/ml in PBS All other reagents Biacore GE Healthcare
[0864] Method:
[0865] An anti 6Xhis antibody was immobilised to a level of approx
9000 RU on a CM5 chip (0.5 mg/ml diluted in Na-acetate, pH 5.0)
using the standard procedure recommended by the supplier. Human
his-tagged TLT-1 in a concentration of 100 ng/ml was used as
ligand. FVIIa-Fab1001 in two-fold dilutions from 29.29 nM to 0.45
nM was used as analytes. The running and dilution buffer was made
from: 10 mM HEPES, 150 mM NaCl, 3 mM EDTA, 0.005% p20, pH 7.4.
Regeneration was obtained by 3 M MgCl.sub.2. The experiment was run
at 25 degree Celsius. Determination of kinetic and binding
constants (k.sub.on, k.sub.off, K.sub.D) was obtained assuming a
1:1 interaction of TLT1 and FVIIa-Fab1001 using the Biacore T200
evaluation software (Table 19).
TABLE-US-00027 TABLE 19 FVIIa-Fab1001 binding to TLT-1 Ka (1/Ms) kd
(1/s) KD (M) FVIIa-Fab1001 binding 8.01E+05 3.19E-03 3.99E-09 to
TLT-1
[0866] Conclusion:
[0867] Binding constants for FVIIa-Fab1001 binding to TLT-1 was
estimated by SPR-analysis and binding to TLT-1 was confirmed.
[0868] SPR-Analysis of FVIIa-Fab5001 Binding to TLT1.
[0869] FVIIa-Fab5001 binds TLT-1 as tested by SPR analysis in a
Biacore T200 instrument.
[0870] Materials used are shown in Table 20.
TABLE-US-00028 TABLE 20 Reagent Source His tagged human TLT1
Example 1 FVIIa-Fab5001 Example 48 Anti 6X his mAb R&D #MAB050
0.5 mg/ml in PBS All other reagents Biacore GE Healthcare
[0871] Method:
[0872] An anti 6Xhis antibody was immobilised to a level of approx
9000 RU on a CM5 chip (0.5 mg/ml diluted in Na-acetate, pH 5.0)
using the standard procedure recommended by the supplier. Human
his-tagged TLT-1 in a concentration of 100 ng/ml was used as
ligand. FVIIa-Fab5001 in two-fold dilutions from 15.77 nM to 0.49
nM was used as analytes. The running and dilution buffer was made
from: 10 mM HEPES, 150 mM NaCl, 3 mM EDTA, 0.005% p20, pH 7.4.
Regeneration was obtained by 3 M MgCl.sub.2. The experiment was run
at 25 degree Celsius. Determination of kinetic and binding
constants (k.sub.on, k.sub.off, K.sub.D) was obtained assuming a
1:1 interaction of TLT1 and FVII-fab using the Biacore T200
evaluation software (Table 21).
TABLE-US-00029 TABLE 21 FVIIa-Fab5001 binding to TLT-1 ka (1/Ms) kd
(1/s) KD (M) FVIIa-Fab5001 binding 2.384E+05 0.001696 7.11E-09 to
TLT-1
[0873] Conclusion:
[0874] Binding constants for FVIIa-Fab5001 binding to TLT-1 was
estimated by SPR-analysis and binding to TLT-1 was confirmed.
Example 57
Recombinant Production of Human FVIII
[0875] The production of the human Factor VIII variants as used
herein has been described in patent number WO2009108806, example 1.
Sequence CWU 1
1
1821933DNAhomo Sapiens 1atgggcctca ccctgctctt gctgctgctc ctgggactag
aaggtcaggg catagttggc 60agcctccctg aggtgctgca ggcacccgtg ggaagctcca
ttctggtgca gtgccactac 120aggctccagg atgtcaaagc tcagaaggtg
tggtgccggt tcttgccgga ggggtgccag 180cccctggtgt cctcagctgt
ggatcgcaga gctccagcgg gcaggcgtac gtttctcaca 240gacctgggtg
ggggcctgct gcaggtggaa atggttaccc tgcaggaaga ggatgctggc
300gagtatggct gcatggtgga tggggccagg gggccccaga ttttgcacag
agtctctctg 360aacatactgc ccccagagga agaagaagag acccataaga
ttggcagtct ggctgagaac 420gcattctcag accctgcagg cagtgccaac
cctttggaac ccagccagga tgagaagagc 480atccccttga tctggggtgc
tgtgctcctg gtaggtctgc tggtggcagc ggtggtgctg 540tttgctgtga
tggccaagag gaaacaaggg aacaggcttg gtgtctgtgg ccgattcctg
600agcagcagag tttcaggcat gaatccctcc tcagtggtcc accacgtcag
tgactctgga 660ccggctgctg aattgccttt ggatgtacca cacattaggc
ttgactcacc accttcattt 720gacaatacca cctacaccag cctacctctt
gattccccat caggaaaacc ttcactccca 780gctccatcct cattgccccc
tctacctcct aaggtcctgg tctgctccaa gcctgtgaca 840tatgccacag
taatcttccc gggagggaac aagggtggag ggacctcgtg tgggccagcc
900cagaatccac ctaacaatca gactccatcc agc 9332311PRTHomo sapiens 2Met
Gly Leu Thr Leu Leu Leu Leu Leu Leu Leu Gly Leu Glu Gly Gln 1 5 10
15 Gly Ile Val Gly Ser Leu Pro Glu Val Leu Gln Ala Pro Val Gly Ser
20 25 30 Ser Ile Leu Val Gln Cys His Tyr Arg Leu Gln Asp Val Lys
Ala Gln 35 40 45 Lys Val Trp Cys Arg Phe Leu Pro Glu Gly Cys Gln
Pro Leu Val Ser 50 55 60 Ser Ala Val Asp Arg Arg Ala Pro Ala Gly
Arg Arg Thr Phe Leu Thr 65 70 75 80 Asp Leu Gly Gly Gly Leu Leu Gln
Val Glu Met Val Thr Leu Gln Glu 85 90 95 Glu Asp Ala Gly Glu Tyr
Gly Cys Met Val Asp Gly Ala Arg Gly Pro 100 105 110 Gln Ile Leu His
Arg Val Ser Leu Asn Ile Leu Pro Pro Glu Glu Glu 115 120 125 Glu Glu
Thr His Lys Ile Gly Ser Leu Ala Glu Asn Ala Phe Ser Asp 130 135 140
Pro Ala Gly Ser Ala Asn Pro Leu Glu Pro Ser Gln Asp Glu Lys Ser 145
150 155 160 Ile Pro Leu Ile Trp Gly Ala Val Leu Leu Val Gly Leu Leu
Val Ala 165 170 175 Ala Val Val Leu Phe Ala Val Met Ala Lys Arg Lys
Gln Gly Asn Arg 180 185 190 Leu Gly Val Cys Gly Arg Phe Leu Ser Ser
Arg Val Ser Gly Met Asn 195 200 205 Pro Ser Ser Val Val His His Val
Ser Asp Ser Gly Pro Ala Ala Glu 210 215 220 Leu Pro Leu Asp Val Pro
His Ile Arg Leu Asp Ser Pro Pro Ser Phe 225 230 235 240 Asp Asn Thr
Thr Tyr Thr Ser Leu Pro Leu Asp Ser Pro Ser Gly Lys 245 250 255 Pro
Ser Leu Pro Ala Pro Ser Ser Leu Pro Pro Leu Pro Pro Lys Val 260 265
270 Leu Val Cys Ser Lys Pro Val Thr Tyr Ala Thr Val Ile Phe Pro Gly
275 280 285 Gly Asn Lys Gly Gly Gly Thr Ser Cys Gly Pro Ala Gln Asn
Pro Pro 290 295 300 Asn Asn Gln Thr Pro Ser Ser 305 310
3528DNAArtificial sequence/note = "extracellular domain of
hTLT-1-His6" 3aagcttgccg ccaccatggg cctcaccctg ctcttgctgc
tgctcctggg actagaaggt 60cagggcatag ttggcagcct ccctgaggtg ctgcaggcac
ccgtgggaag ctccattctg 120gtgcagtgcc actacaggct ccaggatgtc
aaagctcaga aggtgtggtg ccggttcttg 180ccggaggggt gccagcccct
ggtgtcctca gctgtggatc gcagagctcc ggcgggcagg 240cgtacgtttc
tcacagacct gggtgggggc ctgctgcagg tggaaatggt taccctgcag
300gaagaggatg ctggcgagta tggctgcatg gtggatgggg ccagggggcc
ccagattttg 360cacagagtct ctctgaacat actgccccca gaggaagaag
aagagaccca taagattggc 420agtctggctg agaacgcatt ctcagaccct
gcaggcagtg ccaacccttt ggaacccagc 480caggatgaga agagcatccc
ccaccatcac catcaccatt aagaattc 5284168PRTArtificial sequence/note =
"extracellular domain of hTLT-1-His6" 4Met Gly Leu Thr Leu Leu Leu
Leu Leu Leu Leu Gly Leu Glu Gly Gln 1 5 10 15 Gly Ile Val Gly Ser
Leu Pro Glu Val Leu Gln Ala Pro Val Gly Ser 20 25 30 Ser Ile Leu
Val Gln Cys His Tyr Arg Leu Gln Asp Val Lys Ala Gln 35 40 45 Lys
Val Trp Cys Arg Phe Leu Pro Glu Gly Cys Gln Pro Leu Val Ser 50 55
60 Ser Ala Val Asp Arg Arg Ala Pro Ala Gly Arg Arg Thr Phe Leu Thr
65 70 75 80 Asp Leu Gly Gly Gly Leu Leu Gln Val Glu Met Val Thr Leu
Gln Glu 85 90 95 Glu Asp Ala Gly Glu Tyr Gly Cys Met Val Asp Gly
Ala Arg Gly Pro 100 105 110 Gln Ile Leu His Arg Val Ser Leu Asn Ile
Leu Pro Pro Glu Glu Glu 115 120 125 Glu Glu Thr His Lys Ile Gly Ser
Leu Ala Glu Asn Ala Phe Ser Asp 130 135 140 Pro Ala Gly Ser Ala Asn
Pro Leu Glu Pro Ser Gln Asp Glu Lys Ser 145 150 155 160 Ile Pro His
His His His His His 165 5106PRTArtificial sequence/note =
"hTLT-1.20-125" 5Gly Ser Leu Pro Glu Val Leu Gln Ala Pro Val Gly
Ser Ser Ile Leu 1 5 10 15 Val Gln Cys His Tyr Arg Leu Gln Asp Val
Lys Ala Gln Lys Val Trp 20 25 30 Cys Arg Phe Leu Pro Glu Gly Cys
Gln Pro Leu Val Ser Ser Ala Val 35 40 45 Asp Arg Arg Ala Pro Ala
Gly Arg Arg Thr Phe Leu Thr Asp Leu Gly 50 55 60 Gly Gly Leu Leu
Gln Val Glu Met Val Thr Leu Gln Glu Glu Asp Ala 65 70 75 80 Gly Glu
Tyr Gly Cys Met Val Asp Gly Ala Arg Gly Pro Gln Ile Leu 85 90 95
His Arg Val Ser Leu Asn Ile Leu Pro Pro 100 105 6147PRTArtificial
sequence/note = "hTLT-1.16-162" 6Gln Gly Ile Val Gly Ser Leu Pro
Glu Val Leu Gln Ala Pro Val Gly 1 5 10 15 Ser Ser Ile Leu Val Gln
Cys His Tyr Arg Leu Gln Asp Val Lys Ala 20 25 30 Gln Lys Val Trp
Cys Arg Phe Leu Pro Glu Gly Cys Gln Pro Leu Val 35 40 45 Ser Ser
Ala Val Asp Arg Arg Ala Pro Ala Gly Arg Arg Thr Phe Leu 50 55 60
Thr Asp Leu Gly Gly Gly Leu Leu Gln Val Glu Met Val Thr Leu Gln 65
70 75 80 Glu Glu Asp Ala Gly Glu Tyr Gly Cys Met Val Asp Gly Ala
Arg Gly 85 90 95 Pro Gln Ile Leu His Arg Val Ser Leu Asn Ile Leu
Pro Pro Glu Glu 100 105 110 Glu Glu Glu Thr His Lys Ile Gly Ser Leu
Ala Glu Asn Ala Phe Ser 115 120 125 Asp Pro Ala Gly Ser Ala Asn Pro
Leu Glu Pro Ser Gln Asp Glu Lys 130 135 140 Ser Ile Pro 145
737PRTArtificial sequence/note = "hTLT-1.126-162" 7Glu Glu Glu Glu
Glu Thr His Lys Ile Gly Ser Leu Ala Glu Asn Ala 1 5 10 15 Phe Ser
Asp Pro Ala Gly Ser Ala Asn Pro Leu Glu Pro Ser Gln Asp 20 25 30
Glu Lys Ser Ile Pro 35 814PRTArtificial sequence/note =
"hTLT-1.129-142" 8Glu Glu Thr His Lys Ile Gly Ser Leu Ala Glu Asn
Ala Phe 1 5 10 9396DNAHomo sapiens 9atgaagttgc ctgttgggct
gttggtgctg atgttctgga ttccagcttc cagcagtgat 60gttgtgatga cccaaactcc
actctccctg cctgtcagtc ttggagatca agcctccatc 120tcttgcagat
ctagtcagag ccttgtacac agaaatggaa acacctattt tcattggtgc
180ctgcagaaac caggccagtc tccaaagctc ctgatctaca aagtttccaa
ccgattttct 240ggggtcccag acaggttcag tggcagtgga tcagggacag
atttcacact caagatcagc 300agagtggagg ctgaggatct gggagtttat
ttctgctctc aaagtacaca tgttccgtac 360acgttcggag gggggaccaa
gctggaaata aaacgt 39610132PRTHomo sapiens 10Met Lys Leu Pro Val Gly
Leu Leu Val Leu Met Phe Trp Ile Pro Ala 1 5 10 15 Ser Ser Ser Asp
Val Val Met Thr Gln Thr Pro Leu Ser Leu Pro Val 20 25 30 Ser Leu
Gly Asp Gln Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu 35 40 45
Val His Arg Asn Gly Asn Thr Tyr Phe His Trp Cys Leu Gln Lys Pro 50
55 60 Gly Gln Ser Pro Lys Leu Leu Ile Tyr Lys Val Ser Asn Arg Phe
Ser 65 70 75 80 Gly Val Pro Asp Arg Phe Ser Gly Ser Gly Ser Gly Thr
Asp Phe Thr 85 90 95 Leu Lys Ile Ser Arg Val Glu Ala Glu Asp Leu
Gly Val Tyr Phe Cys 100 105 110 Ser Gln Ser Thr His Val Pro Tyr Thr
Phe Gly Gly Gly Thr Lys Leu 115 120 125 Glu Ile Lys Arg 130
11396DNAHomo sapiens 11atggattttg ggctgatttt ttttattgtt gctcttttaa
aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg cagcctggag
gatccctgaa actctcctgt 120gcagcctcag gattcgattt tagtagatac
tggatgactt gggtccggca ggctccaggg 180aaagggctag aatggattgg
agaaattaat ccagatagca gtacgataaa ctatacgcca 240tctctaaagg
ataaattcat catctccaga gacaacgcca agaatacgct gtacctgcaa
300atgagcgaag tgagatctga ggacacagcc ctttattact gtgcaagcgg
ggtgtttact 360tcctggggcc aagggactct ggtcactgtc tctgca
39612132PRTHomo sapiens 12Met Asp Phe Gly Leu Ile Phe Phe Ile Val
Ala Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu
Ser Gly Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu
Ser Cys Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met
Thr Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile
Gly Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Thr Pro 65 70 75 80
Ser Leu Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85
90 95 Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu
Tyr 100 105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly
Thr Leu Val 115 120 125 Thr Val Ser Ala 130 131377DNAArtificial
sequence/note = "mAb 0012 HC" 13atggattttg ggctgatttt ttttattgtt
gctcttttaa aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg
cagcctggag gatccctgaa actctcctgt 120gcagcctcag gattcgattt
tagtagatac tggatgactt gggtccggca ggctccaggg 180aaagggctag
aatggattgg agaaattaat ccagatagca gtacgataaa ctatacgcca
240tctctaaagg ataaattcat catctccaga gacaacgcca agaatacgct
gtacctgcaa 300atgagcgaag tgagatctga ggacacagcc ctttattact
gtgcaagcgg ggtgtttact 360tcctggggcc aagggactct ggtcactgtc
tctgcagcta gcaccaaggg cccatccgtc 420ttccccctgg cgccctgctc
caggagcacc tccgagagca cagccgccct gggctgcctg 480gtcaaggact
acttccccga accggtgacg gtgtcgtgga actcaggcgc cctgaccagc
540ggcgtgcaca ccttcccggc tgtcctacag tcctcaggac tctactccct
cagcagcgtg 600gtgaccgtgc cctccagcag cttgggcacg aagacctaca
cctgcaacgt agatcacaag 660cccagcaaca ccaaggtgga caagagagtt
gagtccaaat atggtccccc atgcccacca 720tgcccagcac ctgagttcct
ggggggacca tcagtcttcc tgttcccccc aaaacccaag 780gacactctca
tgatctcccg gacccctgag gtcacgtgcg tggtggtgga cgtgagccag
840gaagaccccg aggtccagtt caactggtac gtggatggcg tggaggtgca
taatgccaag 900acaaagccgc gggaggagca gttcaacagc acgtaccgtg
tggtcagcgt cctcaccgtc 960ctgcaccagg actggctgaa cggcaaggag
tacaagtgca aggtctccaa caaaggcctc 1020ccgtcctcca tcgagaaaac
catctccaaa gccaaagggc agccccgaga gccacaggtg 1080tacaccctgc
ccccatccca ggaggagatg accaagaacc aggtcagcct gacctgcctg
1140gtcaaaggct tctaccccag cgacatcgcc gtggagtggg agagcaatgg
gcagccggag 1200aacaactaca agaccacgcc tcccgtgctg gactccgacg
gctccttctt cctctacagc 1260aggctaaccg tggacaagag caggtggcag
gaggggaatg tcttctcatg ctccgtgatg 1320catgaggctc tgcacaacca
ctacacacag aagagcctct ccctgtctct gggtaaa 137714714DNAArtificial
sequence/note = "mAb 0012 LC, Fab 0012 LC" 14atgaagttgc ctgttgggct
gttggtgctg atgttctgga ttccagcttc cagcagtgat 60gttgtgatga cccaaactcc
actctccctg cctgtcagtc ttggagatca agcctccatc 120tcttgcagat
ctagtcagag ccttgtacac agaaatggaa acacctattt tcattggtgc
180ctgcagaaac caggccagtc tccaaagctc ctgatctaca aagtttccaa
ccgattttct 240ggggtcccag acaggttcag tggcagtgga tcagggacag
atttcacact caagatcagc 300agagtggagg ctgaggatct gggagtttat
ttctgctctc aaagtacaca tgttccgtac 360acgttcggag gggggaccaa
gctggaaata aaacgtacgg tggctgcacc atctgtcttc 420atcttcccgc
catctgatga gcagttgaaa tctggaactg cctctgttgt gtgcctgctg
480aataacttct atcccagaga ggccaaagta cagtggaagg tggataacgc
cctccaatcg 540ggtaactccc aggagagtgt cacagagcag gacagcaagg
acagcaccta cagcctcagc 600agcaccctga cgctgagcaa agcagactac
gagaaacaca aagtctacgc ctgcgaagtc 660acccatcagg gcctgagctc
gcccgtcaca aagagcttca acaggggaga gtgt 714151401DNAArtificial
sequence/note = "mAb 0023 HC" 15atgaacttgg ggctcagctt gattttcctt
gtccttgttt taaaaggtgt ccagtgtgaa 60gtgaggctgg tggagtctgg gggaggctta
gtgcagcctg gagggtccct gaaactctcc 120tgtgcaacct ctggattcac
tttcagtgac tatttcatgt attggattcg ccagactcca 180gagaagaggc
tggagtgggt cgcatacatt agtaatggtg gtgatagcag ctcttatcca
240gacactgtaa agggccgatt caccatctcc agagacaatg ccaagaacac
cctgtacctg 300caaatgagcc gtctgaagtc tgaggacaca gccatgtatt
attgtgcaac aaataaaaac 360tgggacgatt actatgatat ggactactgg
ggtcaaggaa cctcagtcac cgtctcctca 420gctagcacca agggcccatc
cgtcttcccc ctggcgccct gctccaggag cacctccgag 480agcacagccg
ccctgggctg cctggtcaag gactacttcc ccgaaccggt gacggtgtcg
540tggaactcag gcgccctgac cagcggcgtg cacaccttcc cggctgtcct
acagtcctca 600ggactctact ccctcagcag cgtggtgacc gtgccctcca
gcagcttggg cacgaagacc 660tacacctgca acgtagatca caagcccagc
aacaccaagg tggacaagag agttgagtcc 720aaatatggtc ccccatgccc
accatgccca gcacctgagt tcctgggggg accatcagtc 780ttcctgttcc
ccccaaaacc caaggacact ctcatgatct cccggacccc tgaggtcacg
840tgcgtggtgg tggacgtgag ccaggaagac cccgaggtcc agttcaactg
gtacgtggat 900ggcgtggagg tgcataatgc caagacaaag ccgcgggagg
agcagttcaa cagcacgtac 960cgtgtggtca gcgtcctcac cgtcctgcac
caggactggc tgaacggcaa ggagtacaag 1020tgcaaggtct ccaacaaagg
cctcccgtcc tccatcgaga aaaccatctc caaagccaaa 1080gggcagcccc
gagagccaca ggtgtacacc ctgcccccat cccaggagga gatgaccaag
1140aaccaggtca gcctgacctg cctggtcaaa ggcttctacc ccagcgacat
cgccgtggag 1200tgggagagca atgggcagcc ggagaacaac tacaagacca
cgcctcccgt gctggactcc 1260gacggctcct tcttcctcta cagcaggcta
accgtggaca agagcaggtg gcaggagggg 1320aatgtcttct catgctccgt
gatgcatgag gctctgcaca accactacac acagaagagc 1380ctctccctgt
ctctgggtaa a 140116717DNAArtificial sequence/note = "mAb 0023 LC"
16atggattcac aggcccaggt tcttatattg ctgctgctat gggtatctgg ttcctgtggg
60gacattgtgg tgtcacagtc tccatcctcc ctggctgtgt cagcaggaga gaaggtcact
120atgagttgca aatccagtca gagtctgctc aacagtagaa cccgaaagaa
ctacttggct 180tggtaccagc agaaaccagg gcagtctcct aaactgctga
tctactgggc atccactagg 240gaatctgggg tccctgatcg cttcacaggc
agtggatctg ggacagattt cactctcacc 300atcagcagtg tgcaggctga
agacctggca gtttattact gcaagcaatc ttataatctg 360ctcacgttcg
gtgctgggac caagctggag ctgaaacgta cggtggctgc accatctgtc
420ttcatcttcc cgccatctga tgagcagttg aaatctggaa ctgcctctgt
tgtgtgcctg 480ctgaataact tctatcccag agaggccaaa gtacagtgga
aggtggataa cgccctccaa 540tcgggtaact cccaggagag tgtcacagag
caggacagca aggacagcac ctacagcctc 600agcagcaccc tgacgctgag
caaagcagac tacgagaaac acaaagtcta cgcctgcgaa 660gtcacccatc
agggcctgag ctcgcccgtc acaaagagct tcaacagggg agagtgt
717171401DNAArtificial sequence/note = "mAb 0051 HC" 17atgggttgga
gctgtatcat cttctttctg gtagcaacag ctacaggtgt gcactcccag 60gtccagctgg
agcagtctgg ggctgagctg gtgaggcctg gggtctcagt gaagatttcc
120tgcaagggtt ctggctacac attcactgat tattctatgc actgggtgaa
gcagagtcat 180gcaaagagtc tagagtggat tggagttatt agtacttact
atggtgatgt taggtacaac 240cagaagttca agggcaaggc cacaatgact
gtagacaaat cctccagcac agcctatatg 300gcacttgcca gactgacatc
tgaggattct gccatctatt actgtgcaag agcccctatg 360attacgacag
gggcctggtt tgcttactgg ggccaaggga ctctggtcac tgtctctgca
420gctagcacca agggcccatc cgtcttcccc ctggcgccct gctccaggag
cacctccgag 480agcacagccg ccctgggctg cctggtcaag gactacttcc
ccgaaccggt gacggtgtcg 540tggaactcag gcgccctgac cagcggcgtg
cacaccttcc cggctgtcct acagtcctca 600ggactctact ccctcagcag
cgtggtgacc gtgccctcca gcagcttggg cacgaagacc 660tacacctgca
acgtagatca caagcccagc aacaccaagg tggacaagag agttgagtcc
720aaatatggtc ccccatgccc accatgccca gcacctgagt tcctgggggg
accatcagtc 780ttcctgttcc ccccaaaacc caaggacact ctcatgatct
cccggacccc tgaggtcacg 840tgcgtggtgg tggacgtgag ccaggaagac
cccgaggtcc agttcaactg gtacgtggat 900ggcgtggagg
tgcataatgc caagacaaag ccgcgggagg agcagttcaa cagcacgtac
960cgtgtggtca gcgtcctcac cgtcctgcac caggactggc tgaacggcaa
ggagtacaag 1020tgcaaggtct ccaacaaagg cctcccgtcc tccatcgaga
aaaccatctc caaagccaaa 1080gggcagcccc gagagccaca ggtgtacacc
ctgcccccat cccaggagga gatgaccaag 1140aaccaggtca gcctgacctg
cctggtcaaa ggcttctacc ccagcgacat cgccgtggag 1200tgggagagca
atgggcagcc ggagaacaac tacaagacca cgcctcccgt gctggactcc
1260gacggctcct tcttcctcta cagcaggcta accgtggaca agagcaggtg
gcaggagggg 1320aatgtcttct catgctccgt gatgcatgag gctctgcaca
accactacac acagaagagc 1380ctctccctgt ctctgggtaa a
140118702DNAArtificial sequence/note = "mAb 0051 LC" 18atgaagtcac
agacccaggt cttcgtattt ctactgctct gtgtgtctgg tgctcatggg 60agtattgtga
tgacccagac tcccaaattc ctgcttgtat cagcaggaga cagggttacc
120ataacctgca aggccagtca gagtgtgagt aatgatgtag cttggtacca
acagaagcca 180gggcagtctc ctaaactgct gataaactat gcatccagtc
gctacactgg aatccctgat 240cgcttcactg gcagtggata tgggacggat
ttcactttca ccatcagcac tgtgcaggct 300gaagacctgg cagtttattt
ctgtcagcag gattatagct ctccgtacac gttcggaggg 360gggaccaagc
tggaaataga acgtacggtg gctgcaccat ctgtcttcat cttcccgcca
420tctgatgagc agttgaaatc tggaactgcc tctgttgtgt gcctgctgaa
taacttctat 480cccagagagg ccaaagtaca gtggaaggtg gataacgccc
tccaatcggg taactcccag 540gagagtgtca cagagcagga cagcaaggac
agcacctaca gcctcagcag caccctgacg 600ctgagcaaag cagactacga
gaaacacaaa gtctacgcct gcgaagtcac ccatcagggc 660ctgagctcgc
ccgtcacaaa gagcttcaac aggggagagt gt 702191404DNAArtificial
sequence/note = "mAb 0052 HC" 19atggaatgga cctgggtctt tctcttcctc
ctgtcagtaa ctgcaggtgt ccattcccag 60gtccagctgc agcagtctgg agctgagccg
atgaagcctg gggcctcagt gaagatatcc 120tgcaaggcta ctggctacac
atttagtagt cactggatag agtggataaa acagaggcct 180ggacatggcc
ttgagtggat tggagagatt ttacctggaa gtggaaatac taattacaat
240gagaaattca agggcaaggc cacattcact gcagatacat cctccaacac
agcctacatg 300caactcagca gcctgacatc tgaggactct gccgtctatt
gctgtgcaag agggtactac 360ggtcttaact acgactggta tttcgatgtc
tggggcgcag ggaccacggt caccgtctcc 420tcagctagca ccaagggccc
atccgtcttc cccctggcgc cctgctccag gagcacctcc 480gagagcacag
ccgccctggg ctgcctggtc aaggactact tccccgaacc ggtgacggtg
540tcgtggaact caggcgccct gaccagcggc gtgcacacct tcccggctgt
cctacagtcc 600tcaggactct actccctcag cagcgtggtg accgtgccct
ccagcagctt gggcacgaag 660acctacacct gcaacgtaga tcacaagccc
agcaacacca aggtggacaa gagagttgag 720tccaaatatg gtcccccatg
cccaccatgc ccagcacctg agttcctggg gggaccatca 780gtcttcctgt
tccccccaaa acccaaggac actctcatga tctcccggac ccctgaggtc
840acgtgcgtgg tggtggacgt gagccaggaa gaccccgagg tccagttcaa
ctggtacgtg 900gatggcgtgg aggtgcataa tgccaagaca aagccgcggg
aggagcagtt caacagcacg 960taccgtgtgg tcagcgtcct caccgtcctg
caccaggact ggctgaacgg caaggagtac 1020aagtgcaagg tctccaacaa
aggcctcccg tcctccatcg agaaaaccat ctccaaagcc 1080aaagggcagc
cccgagagcc acaggtgtac accctgcccc catcccagga ggagatgacc
1140aagaaccagg tcagcctgac ctgcctggtc aaaggcttct accccagcga
catcgccgtg 1200gagtgggaga gcaatgggca gccggagaac aactacaaga
ccacgcctcc cgtgctggac 1260tccgacggct ccttcttcct ctacagcagg
ctaaccgtgg acaagagcag gtggcaggag 1320gggaatgtct tctcatgctc
cgtgatgcat gaggctctgc acaaccacta cacacagaag 1380agcctctccc
tgtctctggg taaa 1404201404DNAArtificial sequence/note = "mAb 0062
HC" 20atggaatgga cctgggtctt tctcttcctc ctgtcagtaa ctgcaggtgt
ccattcccag 60gtccagctgc agcagtctgg agctgagccg atgaagcctg gggcctcagt
gaagatatcc 120tgcaaggcta ctggctacac atttagtagt cactggatag
agtggataaa acagaggcct 180ggacatggcc ttgagtggat tggagagatt
ttacctggaa gtggaaatac taattacaat 240gagaaattca agggcaaggc
cacattcact gcagatacat cctccaacac agcctacatg 300caactcagca
gcctgacatc tgaggactct gccgtctatt actgtgcaag agggtactac
360ggtcttaact acgactggta tttcgatgtc tggggcgcag ggaccacggt
caccgtctcc 420tcagctagca ccaagggccc atccgtcttc cccctggcgc
cctgctccag gagcacctcc 480gagagcacag ccgccctggg ctgcctggtc
aaggactact tccccgaacc ggtgacggtg 540tcgtggaact caggcgccct
gaccagcggc gtgcacacct tcccggctgt cctacagtcc 600tcaggactct
actccctcag cagcgtggtg accgtgccct ccagcagctt gggcacgaag
660acctacacct gcaacgtaga tcacaagccc agcaacacca aggtggacaa
gagagttgag 720tccaaatatg gtcccccatg cccaccatgc ccagcacctg
agttcctggg gggaccatca 780gtcttcctgt tccccccaaa acccaaggac
actctcatga tctcccggac ccctgaggtc 840acgtgcgtgg tggtggacgt
gagccaggaa gaccccgagg tccagttcaa ctggtacgtg 900gatggcgtgg
aggtgcataa tgccaagaca aagccgcggg aggagcagtt caacagcacg
960taccgtgtgg tcagcgtcct caccgtcctg caccaggact ggctgaacgg
caaggagtac 1020aagtgcaagg tctccaacaa aggcctcccg tcctccatcg
agaaaaccat ctccaaagcc 1080aaagggcagc cccgagagcc acaggtgtac
accctgcccc catcccagga ggagatgacc 1140aagaaccagg tcagcctgac
ctgcctggtc aaaggcttct accccagcga catcgccgtg 1200gagtgggaga
gcaatgggca gccggagaac aactacaaga ccacgcctcc cgtgctggac
1260tccgacggct ccttcttcct ctacagcagg ctaaccgtgg acaagagcag
gtggcaggag 1320gggaatgtct tctcatgctc cgtgatgcat gaggctctgc
acaaccacta cacacagaag 1380agcctctccc tgtctctggg taaa
140421702DNAArtificial sequence/note = "mAb 0052 LC, mAb 0062 LC"
21atgatgtcct ctgctcagtt ccttggtctc ctgttgctct gttttcaagg taccagatgt
60gatatccaga tgacacagac tacatcctcc ctgtctgcct ctctgggaga cagagtcacc
120attagttgca gggcaagtca ggacattagc aattatttaa actggtatca
gcagaaacca 180gatggaactg ttaaactcct tatcttctac acatcaagat
tacactcagg agtcccgtca 240aggttcagtg gcagtgggtc tgggacagat
tattctctca ccattagcaa cctggaaccg 300gaagatattg ccacttacta
ttgccaacag gatactaagc ttccgtacac gttcggaggg 360gggaccaaac
tggagatgaa acgtacggtg gctgcaccat ctgtcttcat cttcccgcca
420tctgatgagc agttgaaatc tggaactgcc tctgttgtgt gcctgctgaa
taacttctat 480cccagagagg ccaaagtaca gtggaaggtg gataacgccc
tccaatcggg taactcccag 540gagagtgtca cagagcagga cagcaaggac
agcacctaca gcctcagcag caccctgacg 600ctgagcaaag cagactacga
gaaacacaaa gtctacgcct gcgaagtcac ccatcagggc 660ctgagctcgc
ccgtcacaaa gagcttcaac aggggagagt gt 702221377DNAArtificial
sequence/note = "mAb 0061 HC" 22atggattttg ggctgatttt ttttattgtt
gctcttttaa aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg
cagcctggag gatccctgaa actctcctgt 120gcagcctcag gattcgattt
tagtagatac tggatgactt gggtccggca ggctccaggg 180aaagggctag
aatggattgg agaaattaat ccagatagca gtacgataaa ctataaccca
240tctctaaagg ataaattcat catctccaga gacaacgcca agaatacgct
gtacctgcaa 300atgagcgaag tgagatctga ggacacagcc ctttattact
gtgcaagcgg ggtgtttact 360tcctggggcc aagggactct ggtcactgtc
tctgcagcta gcaccaaggg cccatccgtc 420ttccccctgg cgccctgctc
caggagcacc tccgagagca cagccgccct gggctgcctg 480gtcaaggact
acttccccga accggtgacg gtgtcgtgga actcaggcgc cctgaccagc
540ggcgtgcaca ccttcccggc tgtcctacag tcctcaggac tctactccct
cagcagcgtg 600gtgaccgtgc cctccagcag cttgggcacg aagacctaca
cctgcaacgt agatcacaag 660cccagcaaca ccaaggtgga caagagagtt
gagtccaaat atggtccccc atgcccacca 720tgcccagcac ctgagttcct
ggggggacca tcagtcttcc tgttcccccc aaaacccaag 780gacactctca
tgatctcccg gacccctgag gtcacgtgcg tggtggtgga cgtgagccag
840gaagaccccg aggtccagtt caactggtac gtggatggcg tggaggtgca
taatgccaag 900acaaagccgc gggaggagca gttcaacagc acgtaccgtg
tggtcagcgt cctcaccgtc 960ctgcaccagg actggctgaa cggcaaggag
tacaagtgca aggtctccaa caaaggcctc 1020ccgtcctcca tcgagaaaac
catctccaaa gccaaagggc agccccgaga gccacaggtg 1080tacaccctgc
ccccatccca ggaggagatg accaagaacc aggtcagcct gacctgcctg
1140gtcaaaggct tctaccccag cgacatcgcc gtggagtggg agagcaatgg
gcagccggag 1200aacaactaca agaccacgcc tcccgtgctg gactccgacg
gctccttctt cctctacagc 1260aggctaaccg tggacaagag caggtggcag
gaggggaatg tcttctcatg ctccgtgatg 1320catgaggctc tgcacaacca
ctacacacag aagagcctct ccctgtctct gggtaaa 1377231377DNAArtificial
sequence/note = "mAb 0082 HC" 23atggattttg ggctgatttt ttttattgtt
gctcttttaa aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg
cagcctggag gatccctgaa actctcctgt 120gcagcctcag gattcgattt
tagtagatac tggatgactt gggtccggca ggctccaggg 180aaagggctag
aatggattgg agaaattaat ccagatagca gtacgataaa ctatgcgcca
240tctctaaagg ataaattcat catctccaga gacaacgcca agaatacgct
gtacctgcaa 300atgagcgaag tgagatctga ggacacagcc ctttattact
gtgcaagcgg ggtgtttact 360tcctggggcc aagggactct ggtcactgtc
tctgcagcta gcaccaaggg cccatccgtc 420ttccccctgg cgccctgctc
caggagcacc tccgagagca cagccgccct gggctgcctg 480gtcaaggact
acttccccga accggtgacg gtgtcgtgga actcaggcgc cctgaccagc
540ggcgtgcaca ccttcccggc tgtcctacag tcctcaggac tctactccct
cagcagcgtg 600gtgaccgtgc cctccagcag cttgggcacg aagacctaca
cctgcaacgt agatcacaag 660cccagcaaca ccaaggtgga caagagagtt
gagtccaaat atggtccccc atgcccacca 720tgcccagcac ctgagttcct
ggggggacca tcagtcttcc tgttcccccc aaaacccaag 780gacactctca
tgatctcccg gacccctgag gtcacgtgcg tggtggtgga cgtgagccag
840gaagaccccg aggtccagtt caactggtac gtggatggcg tggaggtgca
taatgccaag 900acaaagccgc gggaggagca gttcaacagc acgtaccgtg
tggtcagcgt cctcaccgtc 960ctgcaccagg actggctgaa cggcaaggag
tacaagtgca aggtctccaa caaaggcctc 1020ccgtcctcca tcgagaaaac
catctccaaa gccaaagggc agccccgaga gccacaggtg 1080tacaccctgc
ccccatccca ggaggagatg accaagaacc aggtcagcct gacctgcctg
1140gtcaaaggct tctaccccag cgacatcgcc gtggagtggg agagcaatgg
gcagccggag 1200aacaactaca agaccacgcc tcccgtgctg gactccgacg
gctccttctt cctctacagc 1260aggctaaccg tggacaagag caggtggcag
gaggggaatg tcttctcatg ctccgtgatg 1320catgaggctc tgcacaacca
ctacacacag aagagcctct ccctgtctct gggtaaa 137724714DNAArtificial
sequence/note = "mAb 0061 LC, Fab 0061 LC, mAb 0082 LC, Fab 0082
LC" 24atgaagttgc ctgttgggct gttggtgctg atgttctgga ttccagcttc
cagcagtgat 60gttgtgatga cccaaactcc actctccctg cctgtcagtc ttggagatca
agcctccatc 120tcttgcagat ctagtcagag ccttgtacac agaaatggaa
acacctattt tcattgggcc 180ctgcagaaac caggccagtc tccaaagctc
ctgatctaca aagtttccaa ccgattttct 240ggggtcccag acaggttcag
tggcagtgga tcagggacag atttcacact caagatcagc 300agagtggagg
ctgaggatct gggagtttat ttctgctctc aaagtacaca tgttccgtac
360acgttcggag gggggaccaa gctggaaata aaacgtacgg tggctgcacc
atctgtcttc 420atcttcccgc catctgatga gcagttgaaa tctggaactg
cctctgttgt gtgcctgctg 480aataacttct atcccagaga ggccaaagta
cagtggaagg tggataacgc cctccaatcg 540ggtaactccc aggagagtgt
cacagagcag gacagcaagg acagcaccta cagcctcagc 600agcaccctga
cgctgagcaa agcagactac gagaaacaca aagtctacgc ctgcgaagtc
660acccatcagg gcctgagctc gcccgtcaca aagagcttca acaggggaga gtgt
71425699DNAArtificial sequence/note = "Fab 0012 VH-CH1"
25atggattttg ggctgatttt ttttattgtt gctcttttaa aaggggtcca gtgtgaggtg
60aaacttctcg agtctggagg tggcctggtg cagcctggag gatccctgaa actctcctgt
120gcagcctcag gattcgattt tagtagatac tggatgactt gggtccggca
ggctccaggg 180aaagggctag aatggattgg agaaattaat ccagatagca
gtacgataaa ctatacgcca 240tctctaaagg ataaattcat catctccaga
gacaacgcca agaatacgct gtacctgcaa 300atgagcgaag tgagatctga
ggacacagcc ctttattact gtgcaagcgg ggtgtttact 360tcctggggcc
aagggactct ggtcactgtc tctgcagcta gcaccaaggg cccatccgtc
420ttccccctgg cgccctgctc caggagcacc tccgagagca cagccgccct
gggctgcctg 480gtcaaggact acttccccga accggtgacg gtgtcgtgga
actcaggcgc cctgaccagc 540ggcgtgcaca ccttcccggc tgtcctacag
tcctcaggac tctactccct cagcagcgtg 600gtgaccgtgc cctccagcag
cttgggcacg aagacctaca cctgcaacgt agatcacaag 660cccagcaaca
ccaaggtgga caagagagtt gagtccaaa 69926723DNAArtificial sequence/note
= "Fab 0023 VH-CH1" 26atgaacttgg ggctcagctt gattttcctt gtccttgttt
taaaaggtgt ccagtgtgaa 60gtgaggctgg tggagtctgg gggaggctta gtgcagcctg
gagggtccct gaaactctcc 120tgtgcaacct ctggattcac tttcagtgac
tatttcatgt attggattcg ccagactcca 180gagaagaggc tggagtgggt
cgcatacatt agtaatggtg gtgatagcag ctcttatcca 240gacactgtaa
agggccgatt caccatctcc agagacaatg ccaagaacac cctgtacctg
300caaatgagcc gtctgaagtc tgaggacaca gccatgtatt attgtgcaac
aaataaaaac 360tgggacgatt actatgatat ggactactgg ggtcaaggaa
cctcagtcac cgtctcctca 420gctagcacca agggcccatc cgtcttcccc
ctggcgccct gctccaggag cacctccgag 480agcacagccg ccctgggctg
cctggtcaag gactacttcc ccgaaccggt gacggtgtcg 540tggaactcag
gcgccctgac cagcggcgtg cacaccttcc cggctgtcct acagtcctca
600ggactctact ccctcagcag cgtggtgacc gtgccctcca gcagcttggg
cacgaagacc 660tacacctgca acgtagatca caagcccagc aacaccaagg
tggacaagag agttgagtcc 720aaa 72327723DNAArtificial sequence/note =
"Fab 0051 VH-CH1" 27atgggttgga gctgtatcat cttctttctg gtagcaacag
ctacaggtgt gcactcccag 60gtccagctgg agcagtctgg ggctgagctg gtgaggcctg
gggtctcagt gaagatttcc 120tgcaagggtt ctggctacac attcactgat
tattctatgc actgggtgaa gcagagtcat 180gcaaagagtc tagagtggat
tggagttatt agtacttact atggtgatgt taggtacaac 240cagaagttca
agggcaaggc cacaatgact gtagacaaat cctccagcac agcctatatg
300gcacttgcca gactgacatc tgaggattct gccatctatt actgtgcaag
agcccctatg 360attacgacag gggcctggtt tgcttactgg ggccaaggga
ctctggtcac tgtctctgca 420gctagcacca agggcccatc cgtcttcccc
ctggcgccct gctccaggag cacctccgag 480agcacagccg ccctgggctg
cctggtcaag gactacttcc ccgaaccggt gacggtgtcg 540tggaactcag
gcgccctgac cagcggcgtg cacaccttcc cggctgtcct acagtcctca
600ggactctact ccctcagcag cgtggtgacc gtgccctcca gcagcttggg
cacgaagacc 660tacacctgca acgtagatca caagcccagc aacaccaagg
tggacaagag agttgagtcc 720aaa 72328726DNAArtificial sequence/note =
"Fab 0052 VH-CH1" 28atggaatgga cctgggtctt tctcttcctc ctgtcagtaa
ctgcaggtgt ccattcccag 60gtccagctgc agcagtctgg agctgagccg atgaagcctg
gggcctcagt gaagatatcc 120tgcaaggcta ctggctacac atttagtagt
cactggatag agtggataaa acagaggcct 180ggacatggcc ttgagtggat
tggagagatt ttacctggaa gtggaaatac taattacaat 240gagaaattca
agggcaaggc cacattcact gcagatacat cctccaacac agcctacatg
300caactcagca gcctgacatc tgaggactct gccgtctatt gctgtgcaag
agggtactac 360ggtcttaact acgactggta tttcgatgtc tggggcgcag
ggaccacggt caccgtctcc 420tcagctagca ccaagggccc atccgtcttc
cccctggcgc cctgctccag gagcacctcc 480gagagcacag ccgccctggg
ctgcctggtc aaggactact tccccgaacc ggtgacggtg 540tcgtggaact
caggcgccct gaccagcggc gtgcacacct tcccggctgt cctacagtcc
600tcaggactct actccctcag cagcgtggtg accgtgccct ccagcagctt
gggcacgaag 660acctacacct gcaacgtaga tcacaagccc agcaacacca
aggtggacaa gagagttgag 720tccaaa 72629699DNAArtificial sequence/note
= "Fab 0061 VH-CH1" 29atggattttg ggctgatttt ttttattgtt gctcttttaa
aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg cagcctggag
gatccctgaa actctcctgt 120gcagcctcag gattcgattt tagtagatac
tggatgactt gggtccggca ggctccaggg 180aaagggctag aatggattgg
agaaattaat ccagatagca gtacgataaa ctataaccca 240tctctaaagg
ataaattcat catctccaga gacaacgcca agaatacgct gtacctgcaa
300atgagcgaag tgagatctga ggacacagcc ctttattact gtgcaagcgg
ggtgtttact 360tcctggggcc aagggactct ggtcactgtc tctgcagcta
gcaccaaggg cccatccgtc 420ttccccctgg cgccctgctc caggagcacc
tccgagagca cagccgccct gggctgcctg 480gtcaaggact acttccccga
accggtgacg gtgtcgtgga actcaggcgc cctgaccagc 540ggcgtgcaca
ccttcccggc tgtcctacag tcctcaggac tctactccct cagcagcgtg
600gtgaccgtgc cctccagcag cttgggcacg aagacctaca cctgcaacgt
agatcacaag 660cccagcaaca ccaaggtgga caagagagtt gagtccaaa
69930699DNAArtificial sequence/note = "Fab 0082 VH-CH1"
30atggattttg ggctgatttt ttttattgtt gctcttttaa aaggggtcca gtgtgaggtg
60aaacttctcg agtctggagg tggcctggtg cagcctggag gatccctgaa actctcctgt
120gcagcctcag gattcgattt tagtagatac tggatgactt gggtccggca
ggctccaggg 180aaagggctag aatggattgg agaaattaat ccagatagca
gtacgataaa ctatgcgcca 240tctctaaagg ataaattcat catctccaga
gacaacgcca agaatacgct gtacctgcaa 300atgagcgaag tgagatctga
ggacacagcc ctttattact gtgcaagcgg ggtgtttact 360tcctggggcc
aagggactct ggtcactgtc tctgcagcta gcaccaaggg cccatccgtc
420ttccccctgg cgccctgctc caggagcacc tccgagagca cagccgccct
gggctgcctg 480gtcaaggact acttccccga accggtgacg gtgtcgtgga
actcaggcgc cctgaccagc 540ggcgtgcaca ccttcccggc tgtcctacag
tcctcaggac tctactccct cagcagcgtg 600gtgaccgtgc cctccagcag
cttgggcacg aagacctaca cctgcaacgt agatcacaag 660cccagcaaca
ccaaggtgga caagagagtt gagtccaaa 69931741DNAArtificial sequence/note
= "hIgG4 hinge-CH2-CH3" 31atggattttg ggctgatttt ttttattgtt
gctcttttaa aaggggtcca gtgtgagtcc 60aaatatggtc ccccatgccc accatgccca
gcacctgagt tcctgggggg accatcagtc 120ttcctgttcc ccccaaaacc
caaggacact ctcatgatct cccggacccc tgaggtcacg 180tgcgtggtgg
tggacgtgag ccaggaagac cccgaggtcc agttcaactg gtacgtggat
240ggcgtggagg tgcataatgc caagacaaag ccgcgggagg agcagttcaa
cagcacgtac 300cgtgtggtca gcgtcctcac cgtcctgcac caggactggc
tgaacggcaa ggagtacaag 360tgcaaggtct ccaacaaagg cctcccgtcc
tccatcgaga aaaccatctc caaagccaaa 420gggcagcccc gagagccaca
ggtgtacacc ctgcccccat cccaggagga gatgaccaag 480aaccaggtca
gcctgacctg cctggtcaaa ggcttctacc ccagcgacat cgccgtggag
540tgggagagca atgggcagcc ggagaacaac tacaagacca cgcctcccgt
gctggactcc 600gacggctcct tcttcctcta cagcaggcta accgtggaca
agagcaggtg gcaggagggg 660aatgtcttct catgctccgt gatgcatgag
gctctgcaca accactacac acagaagagc 720ctctccctgt ctctgggtaa a
74132459PRTArtificial sequence/note = "mAb 0012, HC (mouse VH-human
IgG4 CH1-CH2-CH3)" 32Met Asp Phe Gly Leu Ile Phe Phe Ile Val Ala
Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu Ser
Gly Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu Ser
Cys Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met Thr
Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile Gly
Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Thr Pro 65 70 75
80 Ser Leu Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr
85 90 95 Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala
Leu Tyr 100 105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln
Gly Thr Leu Val 115 120 125 Thr Val Ser Ala Ala Ser Thr Lys Gly Pro
Ser Val Phe Pro Leu Ala 130 135 140 Pro Cys Ser Arg Ser Thr Ser Glu
Ser Thr Ala Ala Leu Gly Cys Leu 145 150 155 160 Val Lys Asp Tyr Phe
Pro Glu Pro Val Thr Val Ser Trp Asn Ser Gly 165 170 175 Ala Leu Thr
Ser Gly Val His Thr Phe Pro Ala Val Leu Gln Ser Ser 180 185 190 Gly
Leu Tyr Ser Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu 195 200
205 Gly Thr Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser Asn Thr
210 215 220 Lys Val Asp Lys Arg Val Glu Ser Lys Tyr Gly Pro Pro Cys
Pro Pro 225 230 235 240 Cys Pro Ala Pro Glu Phe Leu Gly Gly Pro Ser
Val Phe Leu Phe Pro 245 250 255 Pro Lys Pro Lys Asp Thr Leu Met Ile
Ser Arg Thr Pro Glu Val Thr 260 265 270 Cys Val Val Val Asp Val Ser
Gln Glu Asp Pro Glu Val Gln Phe Asn 275 280 285 Trp Tyr Val Asp Gly
Val Glu Val His Asn Ala Lys Thr Lys Pro Arg 290 295 300 Glu Glu Gln
Phe Asn Ser Thr Tyr Arg Val Val Ser Val Leu Thr Val 305 310 315 320
Leu His Gln Asp Trp Leu Asn Gly Lys Glu Tyr Lys Cys Lys Val Ser 325
330 335 Asn Lys Gly Leu Pro Ser Ser Ile Glu Lys Thr Ile Ser Lys Ala
Lys 340 345 350 Gly Gln Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro Pro
Ser Gln Glu 355 360 365 Glu Met Thr Lys Asn Gln Val Ser Leu Thr Cys
Leu Val Lys Gly Phe 370 375 380 Tyr Pro Ser Asp Ile Ala Val Glu Trp
Glu Ser Asn Gly Gln Pro Glu 385 390 395 400 Asn Asn Tyr Lys Thr Thr
Pro Pro Val Leu Asp Ser Asp Gly Ser Phe 405 410 415 Phe Leu Tyr Ser
Arg Leu Thr Val Asp Lys Ser Arg Trp Gln Glu Gly 420 425 430 Asn Val
Phe Ser Cys Ser Val Met His Glu Ala Leu His Asn His Tyr 435 440 445
Thr Gln Lys Ser Leu Ser Leu Ser Leu Gly Lys 450 455
33238PRTArtificial sequence/note = "mAb 0012, LC (mouse VL - human
Kappa CL); Fab 0012, LC (mouse VL - human Kappa CL)" 33Met Lys Leu
Pro Val Gly Leu Leu Val Leu Met Phe Trp Ile Pro Ala 1 5 10 15 Ser
Ser Ser Asp Val Val Met Thr Gln Thr Pro Leu Ser Leu Pro Val 20 25
30 Ser Leu Gly Asp Gln Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu
35 40 45 Val His Arg Asn Gly Asn Thr Tyr Phe His Trp Cys Leu Gln
Lys Pro 50 55 60 Gly Gln Ser Pro Lys Leu Leu Ile Tyr Lys Val Ser
Asn Arg Phe Ser 65 70 75 80 Gly Val Pro Asp Arg Phe Ser Gly Ser Gly
Ser Gly Thr Asp Phe Thr 85 90 95 Leu Lys Ile Ser Arg Val Glu Ala
Glu Asp Leu Gly Val Tyr Phe Cys 100 105 110 Ser Gln Ser Thr His Val
Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu 115 120 125 Glu Ile Lys Arg
Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro Pro 130 135 140 Ser Asp
Glu Gln Leu Lys Ser Gly Thr Ala Ser Val Val Cys Leu Leu 145 150 155
160 Asn Asn Phe Tyr Pro Arg Glu Ala Lys Val Gln Trp Lys Val Asp Asn
165 170 175 Ala Leu Gln Ser Gly Asn Ser Gln Glu Ser Val Thr Glu Gln
Asp Ser 180 185 190 Lys Asp Ser Thr Tyr Ser Leu Ser Ser Thr Leu Thr
Leu Ser Lys Ala 195 200 205 Asp Tyr Glu Lys His Lys Val Tyr Ala Cys
Glu Val Thr His Gln Gly 210 215 220 Leu Ser Ser Pro Val Thr Lys Ser
Phe Asn Arg Gly Glu Cys 225 230 235 34467PRTArtificial
sequence/note = "mAb 0023, HC (mouse VH-human IgG4 CH1-CH2-CH3)"
34Met Asn Leu Gly Leu Ser Leu Ile Phe Leu Val Leu Val Leu Lys Gly 1
5 10 15 Val Gln Cys Glu Val Arg Leu Val Glu Ser Gly Gly Gly Leu Val
Gln 20 25 30 Pro Gly Gly Ser Leu Lys Leu Ser Cys Ala Thr Ser Gly
Phe Thr Phe 35 40 45 Ser Asp Tyr Phe Met Tyr Trp Ile Arg Gln Thr
Pro Glu Lys Arg Leu 50 55 60 Glu Trp Val Ala Tyr Ile Ser Asn Gly
Gly Asp Ser Ser Ser Tyr Pro 65 70 75 80 Asp Thr Val Lys Gly Arg Phe
Thr Ile Ser Arg Asp Asn Ala Lys Asn 85 90 95 Thr Leu Tyr Leu Gln
Met Ser Arg Leu Lys Ser Glu Asp Thr Ala Met 100 105 110 Tyr Tyr Cys
Ala Thr Asn Lys Asn Trp Asp Asp Tyr Tyr Asp Met Asp 115 120 125 Tyr
Trp Gly Gln Gly Thr Ser Val Thr Val Ser Ser Ala Ser Thr Lys 130 135
140 Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu
145 150 155 160 Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe
Pro Glu Pro 165 170 175 Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr
Ser Gly Val His Thr 180 185 190 Phe Pro Ala Val Leu Gln Ser Ser Gly
Leu Tyr Ser Leu Ser Ser Val 195 200 205 Val Thr Val Pro Ser Ser Ser
Leu Gly Thr Lys Thr Tyr Thr Cys Asn 210 215 220 Val Asp His Lys Pro
Ser Asn Thr Lys Val Asp Lys Arg Val Glu Ser 225 230 235 240 Lys Tyr
Gly Pro Pro Cys Pro Pro Cys Pro Ala Pro Glu Phe Leu Gly 245 250 255
Gly Pro Ser Val Phe Leu Phe Pro Pro Lys Pro Lys Asp Thr Leu Met 260
265 270 Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val Asp Val Ser
Gln 275 280 285 Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val Asp Gly
Val Glu Val 290 295 300 His Asn Ala Lys Thr Lys Pro Arg Glu Glu Gln
Phe Asn Ser Thr Tyr 305 310 315 320 Arg Val Val Ser Val Leu Thr Val
Leu His Gln Asp Trp Leu Asn Gly 325 330 335 Lys Glu Tyr Lys Cys Lys
Val Ser Asn Lys Gly Leu Pro Ser Ser Ile 340 345 350 Glu Lys Thr Ile
Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln Val 355 360 365 Tyr Thr
Leu Pro Pro Ser Gln Glu Glu Met Thr Lys Asn Gln Val Ser 370 375 380
Leu Thr Cys Leu Val Lys Gly Phe Tyr Pro Ser Asp Ile Ala Val Glu 385
390 395 400 Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys Thr Thr
Pro Pro 405 410 415 Val Leu Asp Ser Asp Gly Ser Phe Phe Leu Tyr Ser
Arg Leu Thr Val 420 425 430 Asp Lys Ser Arg Trp Gln Glu Gly Asn Val
Phe Ser Cys Ser Val Met 435 440 445 His Glu Ala Leu His Asn His Tyr
Thr Gln Lys Ser Leu Ser Leu Ser 450 455 460 Leu Gly Lys 465
35239PRTArtificial sequence/note = "mAb 0023, LC (mouse VL - human
Kappa CL); Fab 0023, LC (mouse VL - human Kappa CL)" 35Met Asp Ser
Gln Ala Gln Val Leu Ile Leu Leu Leu Leu Trp Val Ser 1 5 10 15 Gly
Ser Cys Gly Asp Ile Val Val Ser Gln Ser Pro Ser Ser Leu Ala 20 25
30 Val Ser Ala Gly Glu Lys Val Thr Met Ser Cys Lys Ser Ser Gln Ser
35 40 45 Leu Leu Asn Ser Arg Thr Arg Lys Asn Tyr Leu Ala Trp Tyr
Gln Gln 50 55 60 Lys Pro Gly Gln Ser Pro Lys Leu Leu Ile Tyr Trp
Ala Ser Thr Arg 65 70 75 80 Glu Ser Gly Val Pro Asp Arg Phe Thr Gly
Ser Gly Ser Gly Thr Asp 85 90 95 Phe Thr Leu Thr Ile Ser Ser Val
Gln Ala Glu Asp Leu Ala Val Tyr 100 105 110 Tyr Cys Lys Gln Ser Tyr
Asn Leu Leu Thr Phe Gly Ala Gly Thr Lys 115 120 125 Leu Glu Leu Lys
Arg Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro 130 135 140 Pro Ser
Asp Glu Gln Leu Lys Ser Gly Thr Ala Ser Val Val Cys Leu 145 150 155
160 Leu Asn Asn Phe Tyr Pro Arg Glu Ala Lys Val Gln Trp Lys Val Asp
165 170 175 Asn Ala Leu Gln Ser Gly Asn Ser Gln Glu Ser Val Thr Glu
Gln Asp 180 185 190 Ser Lys Asp Ser Thr Tyr Ser Leu Ser Ser Thr Leu
Thr Leu Ser Lys 195 200 205 Ala Asp Tyr Glu Lys His Lys Val Tyr Ala
Cys Glu Val Thr His Gln 210 215 220 Gly Leu Ser Ser Pro Val Thr Lys
Ser Phe Asn Arg Gly Glu Cys 225 230 235 36467PRTArtificial
sequence/note = "mAb 0051, HC (mouse VH-human IgG4 CH1-CH2-CH3)"
36Met Gly Trp Ser Cys Ile Ile Phe Phe Leu Val Ala Thr Ala Thr Gly 1
5 10 15 Val His Ser Gln Val Gln Leu Glu Gln Ser Gly Ala Glu Leu Val
Arg 20 25 30 Pro Gly Val Ser Val Lys Ile Ser Cys Lys Gly Ser Gly
Tyr Thr Phe 35 40 45 Thr Asp Tyr Ser Met His Trp Val Lys Gln Ser
His Ala Lys Ser Leu 50 55 60 Glu Trp Ile Gly Val Ile Ser Thr Tyr
Tyr Gly Asp Val Arg Tyr Asn 65 70 75 80 Gln Lys Phe Lys Gly Lys Ala
Thr Met Thr Val Asp Lys Ser Ser Ser 85 90 95 Thr Ala Tyr Met Ala
Leu Ala Arg Leu Thr Ser Glu Asp Ser Ala Ile 100 105 110 Tyr Tyr Cys
Ala Arg Ala Pro Met Ile Thr Thr Gly Ala Trp Phe Ala 115 120 125 Tyr
Trp Gly Gln Gly Thr Leu Val Thr Val Ser Ala Ala Ser Thr Lys 130 135
140 Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu
145 150 155 160 Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe
Pro Glu Pro 165 170 175 Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr
Ser Gly Val His Thr 180 185 190 Phe Pro Ala Val Leu Gln Ser Ser Gly
Leu Tyr Ser Leu Ser Ser Val 195 200 205 Val Thr Val Pro Ser Ser Ser
Leu Gly Thr Lys Thr Tyr Thr Cys Asn 210 215 220 Val Asp His Lys Pro
Ser Asn Thr Lys Val Asp Lys Arg Val Glu Ser 225 230 235 240 Lys Tyr
Gly Pro Pro Cys Pro Pro Cys Pro Ala Pro Glu Phe Leu Gly 245 250 255
Gly Pro Ser Val Phe Leu Phe Pro Pro Lys Pro Lys Asp Thr Leu Met 260
265 270 Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val Asp Val Ser
Gln 275 280 285 Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val Asp Gly
Val Glu Val 290 295 300 His Asn Ala Lys Thr Lys Pro Arg Glu Glu Gln
Phe Asn Ser Thr Tyr 305 310 315 320 Arg Val Val Ser Val Leu Thr Val
Leu His Gln Asp Trp Leu Asn Gly 325 330 335 Lys Glu Tyr Lys Cys Lys
Val Ser Asn Lys Gly Leu Pro Ser Ser Ile 340 345 350 Glu Lys Thr Ile
Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln Val 355 360 365 Tyr Thr
Leu Pro Pro Ser Gln Glu Glu Met Thr Lys Asn Gln Val Ser 370 375 380
Leu Thr Cys Leu Val Lys Gly Phe Tyr Pro Ser Asp Ile Ala Val Glu 385
390 395 400 Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys Thr Thr
Pro Pro 405 410 415 Val Leu Asp Ser Asp Gly Ser Phe Phe Leu Tyr Ser
Arg Leu Thr Val 420 425 430 Asp Lys Ser Arg Trp Gln Glu Gly Asn Val
Phe Ser Cys Ser Val Met 435 440 445 His Glu Ala Leu His Asn His Tyr
Thr Gln Lys Ser Leu Ser Leu Ser 450 455 460 Leu Gly Lys 465
37234PRTArtificial sequence/note = "mAb 0051, LC (mouse VL - human
Kappa CL); Fab 0051, LC (mouse VL - human Kappa CL)" 37Met Lys Ser
Gln Thr Gln Val Phe Val Phe Leu Leu Leu Cys Val Ser 1 5 10 15 Gly
Ala His Gly Ser Ile Val Met Thr Gln Thr Pro Lys Phe Leu Leu 20 25
30 Val Ser Ala Gly Asp Arg Val Thr Ile Thr Cys Lys Ala Ser Gln Ser
35 40 45 Val Ser Asn Asp Val Ala Trp Tyr Gln Gln Lys Pro Gly Gln
Ser Pro 50 55 60 Lys Leu Leu Ile Asn Tyr Ala Ser Ser Arg Tyr Thr
Gly Ile Pro Asp 65 70 75 80 Arg Phe Thr Gly Ser Gly Tyr Gly Thr Asp
Phe Thr Phe Thr Ile Ser 85 90 95 Thr Val Gln Ala Glu Asp Leu Ala
Val Tyr Phe Cys Gln Gln Asp Tyr 100 105 110 Ser Ser Pro Tyr Thr Phe
Gly Gly Gly Thr Lys Leu Glu Ile Glu Arg 115 120 125 Thr Val Ala Ala
Pro Ser Val Phe Ile Phe Pro Pro Ser Asp Glu Gln 130 135 140 Leu Lys
Ser Gly Thr Ala Ser Val Val Cys Leu Leu Asn Asn Phe Tyr 145 150 155
160 Pro Arg Glu Ala Lys Val Gln Trp Lys Val Asp Asn Ala Leu Gln Ser
165 170 175 Gly Asn Ser Gln Glu Ser Val Thr Glu Gln Asp Ser Lys Asp
Ser Thr 180 185 190 Tyr Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys Ala
Asp Tyr Glu Lys 195 200 205 His Lys Val Tyr Ala Cys Glu Val Thr His
Gln Gly Leu Ser Ser Pro 210 215 220 Val Thr Lys Ser Phe Asn Arg Gly
Glu Cys 225 230 38468PRTArtificial sequence/note = "mAb 0052, HC
(mouse VH-human IgG4 CH1-CH2-CH3)" 38Met Glu Trp Thr Trp Val Phe
Leu Phe Leu Leu Ser Val Thr Ala Gly 1 5 10 15 Val His Ser Gln Val
Gln Leu Gln Gln Ser Gly Ala Glu Pro Met Lys 20 25 30 Pro Gly Ala
Ser Val Lys Ile Ser Cys Lys Ala Thr Gly Tyr Thr Phe 35 40 45 Ser
Ser His Trp Ile Glu Trp Ile Lys Gln Arg Pro Gly His Gly Leu 50 55
60 Glu Trp Ile Gly Glu Ile Leu Pro Gly Ser Gly Asn Thr Asn Tyr Asn
65 70 75 80 Glu Lys Phe Lys Gly Lys Ala Thr Phe Thr Ala Asp Thr Ser
Ser Asn 85 90 95 Thr Ala Tyr Met Gln Leu Ser Ser Leu Thr Ser Glu
Asp Ser Ala Val 100 105 110 Tyr Cys Cys Ala Arg Gly Tyr Tyr Gly Leu
Asn Tyr Asp Trp Tyr Phe 115 120 125 Asp Val Trp Gly Ala Gly Thr Thr
Val Thr Val Ser Ser Ala Ser Thr 130 135 140 Lys Gly Pro Ser Val Phe
Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser 145 150 155 160 Glu Ser Thr
Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu 165 170 175 Pro
Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val His 180 185
190 Thr Phe Pro Ala Val Leu Gln Ser
Ser Gly Leu Tyr Ser Leu Ser Ser 195 200 205 Val Val Thr Val Pro Ser
Ser Ser Leu Gly Thr Lys Thr Tyr Thr Cys 210 215 220 Asn Val Asp His
Lys Pro Ser Asn Thr Lys Val Asp Lys Arg Val Glu 225 230 235 240 Ser
Lys Tyr Gly Pro Pro Cys Pro Pro Cys Pro Ala Pro Glu Phe Leu 245 250
255 Gly Gly Pro Ser Val Phe Leu Phe Pro Pro Lys Pro Lys Asp Thr Leu
260 265 270 Met Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val Asp
Val Ser 275 280 285 Gln Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val
Asp Gly Val Glu 290 295 300 Val His Asn Ala Lys Thr Lys Pro Arg Glu
Glu Gln Phe Asn Ser Thr 305 310 315 320 Tyr Arg Val Val Ser Val Leu
Thr Val Leu His Gln Asp Trp Leu Asn 325 330 335 Gly Lys Glu Tyr Lys
Cys Lys Val Ser Asn Lys Gly Leu Pro Ser Ser 340 345 350 Ile Glu Lys
Thr Ile Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln 355 360 365 Val
Tyr Thr Leu Pro Pro Ser Gln Glu Glu Met Thr Lys Asn Gln Val 370 375
380 Ser Leu Thr Cys Leu Val Lys Gly Phe Tyr Pro Ser Asp Ile Ala Val
385 390 395 400 Glu Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys
Thr Thr Pro 405 410 415 Pro Val Leu Asp Ser Asp Gly Ser Phe Phe Leu
Tyr Ser Arg Leu Thr 420 425 430 Val Asp Lys Ser Arg Trp Gln Glu Gly
Asn Val Phe Ser Cys Ser Val 435 440 445 Met His Glu Ala Leu His Asn
His Tyr Thr Gln Lys Ser Leu Ser Leu 450 455 460 Ser Leu Gly Lys 465
39234PRTArtificial sequence/note = "mAb 0052, LC (mouse VL - human
Kappa CL); mAb 0062, LC (mouse VL - human Kappa CL); Fab 0052, LC
(mouse VL - human Kappa CL)" 39Met Met Ser Ser Ala Gln Phe Leu Gly
Leu Leu Leu Leu Cys Phe Gln 1 5 10 15 Gly Thr Arg Cys Asp Ile Gln
Met Thr Gln Thr Thr Ser Ser Leu Ser 20 25 30 Ala Ser Leu Gly Asp
Arg Val Thr Ile Ser Cys Arg Ala Ser Gln Asp 35 40 45 Ile Ser Asn
Tyr Leu Asn Trp Tyr Gln Gln Lys Pro Asp Gly Thr Val 50 55 60 Lys
Leu Leu Ile Phe Tyr Thr Ser Arg Leu His Ser Gly Val Pro Ser 65 70
75 80 Arg Phe Ser Gly Ser Gly Ser Gly Thr Asp Tyr Ser Leu Thr Ile
Ser 85 90 95 Asn Leu Glu Pro Glu Asp Ile Ala Thr Tyr Tyr Cys Gln
Gln Asp Thr 100 105 110 Lys Leu Pro Tyr Thr Phe Gly Gly Gly Thr Lys
Leu Glu Met Lys Arg 115 120 125 Thr Val Ala Ala Pro Ser Val Phe Ile
Phe Pro Pro Ser Asp Glu Gln 130 135 140 Leu Lys Ser Gly Thr Ala Ser
Val Val Cys Leu Leu Asn Asn Phe Tyr 145 150 155 160 Pro Arg Glu Ala
Lys Val Gln Trp Lys Val Asp Asn Ala Leu Gln Ser 165 170 175 Gly Asn
Ser Gln Glu Ser Val Thr Glu Gln Asp Ser Lys Asp Ser Thr 180 185 190
Tyr Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys Ala Asp Tyr Glu Lys 195
200 205 His Lys Val Tyr Ala Cys Glu Val Thr His Gln Gly Leu Ser Ser
Pro 210 215 220 Val Thr Lys Ser Phe Asn Arg Gly Glu Cys 225 230
40459PRTArtificial sequence/note = "mAb 0061, HC (mouse VH-human
IgG4 CH1-CH2-CH3)" 40Met Asp Phe Gly Leu Ile Phe Phe Ile Val Ala
Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu Ser
Gly Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu Ser
Cys Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met Thr
Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile Gly
Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Asn Pro 65 70 75 80 Ser
Leu Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85 90
95 Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu Tyr
100 105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly Thr
Leu Val 115 120 125 Thr Val Ser Ala Ala Ser Thr Lys Gly Pro Ser Val
Phe Pro Leu Ala 130 135 140 Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr
Ala Ala Leu Gly Cys Leu 145 150 155 160 Val Lys Asp Tyr Phe Pro Glu
Pro Val Thr Val Ser Trp Asn Ser Gly 165 170 175 Ala Leu Thr Ser Gly
Val His Thr Phe Pro Ala Val Leu Gln Ser Ser 180 185 190 Gly Leu Tyr
Ser Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu 195 200 205 Gly
Thr Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser Asn Thr 210 215
220 Lys Val Asp Lys Arg Val Glu Ser Lys Tyr Gly Pro Pro Cys Pro Pro
225 230 235 240 Cys Pro Ala Pro Glu Phe Leu Gly Gly Pro Ser Val Phe
Leu Phe Pro 245 250 255 Pro Lys Pro Lys Asp Thr Leu Met Ile Ser Arg
Thr Pro Glu Val Thr 260 265 270 Cys Val Val Val Asp Val Ser Gln Glu
Asp Pro Glu Val Gln Phe Asn 275 280 285 Trp Tyr Val Asp Gly Val Glu
Val His Asn Ala Lys Thr Lys Pro Arg 290 295 300 Glu Glu Gln Phe Asn
Ser Thr Tyr Arg Val Val Ser Val Leu Thr Val 305 310 315 320 Leu His
Gln Asp Trp Leu Asn Gly Lys Glu Tyr Lys Cys Lys Val Ser 325 330 335
Asn Lys Gly Leu Pro Ser Ser Ile Glu Lys Thr Ile Ser Lys Ala Lys 340
345 350 Gly Gln Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro Pro Ser Gln
Glu 355 360 365 Glu Met Thr Lys Asn Gln Val Ser Leu Thr Cys Leu Val
Lys Gly Phe 370 375 380 Tyr Pro Ser Asp Ile Ala Val Glu Trp Glu Ser
Asn Gly Gln Pro Glu 385 390 395 400 Asn Asn Tyr Lys Thr Thr Pro Pro
Val Leu Asp Ser Asp Gly Ser Phe 405 410 415 Phe Leu Tyr Ser Arg Leu
Thr Val Asp Lys Ser Arg Trp Gln Glu Gly 420 425 430 Asn Val Phe Ser
Cys Ser Val Met His Glu Ala Leu His Asn His Tyr 435 440 445 Thr Gln
Lys Ser Leu Ser Leu Ser Leu Gly Lys 450 455 41238PRTArtificial
sequence/note = "mAb 0061, LC (mouse VL - human Kappa CL); Fab
0061, LC (mouse VL - human Kappa CL); mAb 0082, LC (mouse VL -
human Kappa CL); Fab 0082, LC (mouse VL - human Kappa CL)" 41Met
Lys Leu Pro Val Gly Leu Leu Val Leu Met Phe Trp Ile Pro Ala 1 5 10
15 Ser Ser Ser Asp Val Val Met Thr Gln Thr Pro Leu Ser Leu Pro Val
20 25 30 Ser Leu Gly Asp Gln Ala Ser Ile Ser Cys Arg Ser Ser Gln
Ser Leu 35 40 45 Val His Arg Asn Gly Asn Thr Tyr Phe His Trp Ala
Leu Gln Lys Pro 50 55 60 Gly Gln Ser Pro Lys Leu Leu Ile Tyr Lys
Val Ser Asn Arg Phe Ser 65 70 75 80 Gly Val Pro Asp Arg Phe Ser Gly
Ser Gly Ser Gly Thr Asp Phe Thr 85 90 95 Leu Lys Ile Ser Arg Val
Glu Ala Glu Asp Leu Gly Val Tyr Phe Cys 100 105 110 Ser Gln Ser Thr
His Val Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu 115 120 125 Glu Ile
Lys Arg Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro Pro 130 135 140
Ser Asp Glu Gln Leu Lys Ser Gly Thr Ala Ser Val Val Cys Leu Leu 145
150 155 160 Asn Asn Phe Tyr Pro Arg Glu Ala Lys Val Gln Trp Lys Val
Asp Asn 165 170 175 Ala Leu Gln Ser Gly Asn Ser Gln Glu Ser Val Thr
Glu Gln Asp Ser 180 185 190 Lys Asp Ser Thr Tyr Ser Leu Ser Ser Thr
Leu Thr Leu Ser Lys Ala 195 200 205 Asp Tyr Glu Lys His Lys Val Tyr
Ala Cys Glu Val Thr His Gln Gly 210 215 220 Leu Ser Ser Pro Val Thr
Lys Ser Phe Asn Arg Gly Glu Cys 225 230 235 42468PRTArtificial
sequence/note = "mAb 0062, HC (mouse VH-human IgG4 CH1-CH2-CH3)"
42Met Glu Trp Thr Trp Val Phe Leu Phe Leu Leu Ser Val Thr Ala Gly 1
5 10 15 Val His Ser Gln Val Gln Leu Gln Gln Ser Gly Ala Glu Pro Met
Lys 20 25 30 Pro Gly Ala Ser Val Lys Ile Ser Cys Lys Ala Thr Gly
Tyr Thr Phe 35 40 45 Ser Ser His Trp Ile Glu Trp Ile Lys Gln Arg
Pro Gly His Gly Leu 50 55 60 Glu Trp Ile Gly Glu Ile Leu Pro Gly
Ser Gly Asn Thr Asn Tyr Asn 65 70 75 80 Glu Lys Phe Lys Gly Lys Ala
Thr Phe Thr Ala Asp Thr Ser Ser Asn 85 90 95 Thr Ala Tyr Met Gln
Leu Ser Ser Leu Thr Ser Glu Asp Ser Ala Val 100 105 110 Tyr Tyr Cys
Ala Arg Gly Tyr Tyr Gly Leu Asn Tyr Asp Trp Tyr Phe 115 120 125 Asp
Val Trp Gly Ala Gly Thr Thr Val Thr Val Ser Ser Ala Ser Thr 130 135
140 Lys Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser
145 150 155 160 Glu Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr
Phe Pro Glu 165 170 175 Pro Val Thr Val Ser Trp Asn Ser Gly Ala Leu
Thr Ser Gly Val His 180 185 190 Thr Phe Pro Ala Val Leu Gln Ser Ser
Gly Leu Tyr Ser Leu Ser Ser 195 200 205 Val Val Thr Val Pro Ser Ser
Ser Leu Gly Thr Lys Thr Tyr Thr Cys 210 215 220 Asn Val Asp His Lys
Pro Ser Asn Thr Lys Val Asp Lys Arg Val Glu 225 230 235 240 Ser Lys
Tyr Gly Pro Pro Cys Pro Pro Cys Pro Ala Pro Glu Phe Leu 245 250 255
Gly Gly Pro Ser Val Phe Leu Phe Pro Pro Lys Pro Lys Asp Thr Leu 260
265 270 Met Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val Asp Val
Ser 275 280 285 Gln Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val Asp
Gly Val Glu 290 295 300 Val His Asn Ala Lys Thr Lys Pro Arg Glu Glu
Gln Phe Asn Ser Thr 305 310 315 320 Tyr Arg Val Val Ser Val Leu Thr
Val Leu His Gln Asp Trp Leu Asn 325 330 335 Gly Lys Glu Tyr Lys Cys
Lys Val Ser Asn Lys Gly Leu Pro Ser Ser 340 345 350 Ile Glu Lys Thr
Ile Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln 355 360 365 Val Tyr
Thr Leu Pro Pro Ser Gln Glu Glu Met Thr Lys Asn Gln Val 370 375 380
Ser Leu Thr Cys Leu Val Lys Gly Phe Tyr Pro Ser Asp Ile Ala Val 385
390 395 400 Glu Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys Thr
Thr Pro 405 410 415 Pro Val Leu Asp Ser Asp Gly Ser Phe Phe Leu Tyr
Ser Arg Leu Thr 420 425 430 Val Asp Lys Ser Arg Trp Gln Glu Gly Asn
Val Phe Ser Cys Ser Val 435 440 445 Met His Glu Ala Leu His Asn His
Tyr Thr Gln Lys Ser Leu Ser Leu 450 455 460 Ser Leu Gly Lys 465
43459PRTArtificial sequence/note = "mAb 0082, HC (mouse VH-human
IgG4 CH1-CH2-CH3)" 43Met Asp Phe Gly Leu Ile Phe Phe Ile Val Ala
Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu Ser
Gly Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu Ser
Cys Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met Thr
Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile Gly
Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Ala Pro 65 70 75 80 Ser
Leu Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85 90
95 Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu Tyr
100 105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly Thr
Leu Val 115 120 125 Thr Val Ser Ala Ala Ser Thr Lys Gly Pro Ser Val
Phe Pro Leu Ala 130 135 140 Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr
Ala Ala Leu Gly Cys Leu 145 150 155 160 Val Lys Asp Tyr Phe Pro Glu
Pro Val Thr Val Ser Trp Asn Ser Gly 165 170 175 Ala Leu Thr Ser Gly
Val His Thr Phe Pro Ala Val Leu Gln Ser Ser 180 185 190 Gly Leu Tyr
Ser Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu 195 200 205 Gly
Thr Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser Asn Thr 210 215
220 Lys Val Asp Lys Arg Val Glu Ser Lys Tyr Gly Pro Pro Cys Pro Pro
225 230 235 240 Cys Pro Ala Pro Glu Phe Leu Gly Gly Pro Ser Val Phe
Leu Phe Pro 245 250 255 Pro Lys Pro Lys Asp Thr Leu Met Ile Ser Arg
Thr Pro Glu Val Thr 260 265 270 Cys Val Val Val Asp Val Ser Gln Glu
Asp Pro Glu Val Gln Phe Asn 275 280 285 Trp Tyr Val Asp Gly Val Glu
Val His Asn Ala Lys Thr Lys Pro Arg 290 295 300 Glu Glu Gln Phe Asn
Ser Thr Tyr Arg Val Val Ser Val Leu Thr Val 305 310 315 320 Leu His
Gln Asp Trp Leu Asn Gly Lys Glu Tyr Lys Cys Lys Val Ser 325 330 335
Asn Lys Gly Leu Pro Ser Ser Ile Glu Lys Thr Ile Ser Lys Ala Lys 340
345 350 Gly Gln Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro Pro Ser Gln
Glu 355 360 365 Glu Met Thr Lys Asn Gln Val Ser Leu Thr Cys Leu Val
Lys Gly Phe 370 375 380 Tyr Pro Ser Asp Ile Ala Val Glu Trp Glu Ser
Asn Gly Gln Pro Glu 385 390 395 400 Asn Asn Tyr Lys Thr Thr Pro Pro
Val Leu Asp Ser Asp Gly Ser Phe 405 410 415 Phe Leu Tyr Ser Arg Leu
Thr Val Asp Lys Ser Arg Trp Gln Glu Gly 420 425 430 Asn Val Phe Ser
Cys Ser Val Met His Glu Ala Leu His Asn His Tyr 435 440 445 Thr Gln
Lys Ser Leu Ser Leu Ser Leu Gly Lys 450 455 44233PRTArtificial
sequence/note = "Fab 0012, mouse VH - human IgG4 CH1" 44Met Asp Phe
Gly Leu Ile Phe Phe Ile Val Ala Leu Leu Lys Gly Val 1 5 10 15 Gln
Cys Glu Val Lys Leu Leu Glu Ser Gly Gly Gly Leu Val Gln Pro 20 25
30 Gly Gly Ser Leu Lys Leu Ser Cys Ala Ala Ser Gly Phe Asp Phe Ser
35 40 45 Arg Tyr Trp Met Thr Trp Val Arg Gln Ala Pro Gly Lys Gly
Leu Glu 50 55 60 Trp Ile Gly Glu Ile Asn Pro Asp Ser Ser Thr Ile
Asn Tyr Thr Pro 65 70 75 80 Ser Leu Lys Asp Lys
Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85 90 95 Leu Tyr Leu
Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu Tyr 100 105 110 Tyr
Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly Thr Leu Val 115 120
125 Thr Val Ser Ala Ala Ser Thr Lys Gly Pro Ser Val Phe Pro Leu Ala
130 135 140 Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr Ala Ala Leu Gly
Cys Leu 145 150 155 160 Val Lys Asp Tyr Phe Pro Glu Pro Val Thr Val
Ser Trp Asn Ser Gly 165 170 175 Ala Leu Thr Ser Gly Val His Thr Phe
Pro Ala Val Leu Gln Ser Ser 180 185 190 Gly Leu Tyr Ser Leu Ser Ser
Val Val Thr Val Pro Ser Ser Ser Leu 195 200 205 Gly Thr Lys Thr Tyr
Thr Cys Asn Val Asp His Lys Pro Ser Asn Thr 210 215 220 Lys Val Asp
Lys Arg Val Glu Ser Lys 225 230 45241PRTArtificial sequence/note =
"Fab 0023, mouse VH - human IgG4 CH1" 45Met Asn Leu Gly Leu Ser Leu
Ile Phe Leu Val Leu Val Leu Lys Gly 1 5 10 15 Val Gln Cys Glu Val
Arg Leu Val Glu Ser Gly Gly Gly Leu Val Gln 20 25 30 Pro Gly Gly
Ser Leu Lys Leu Ser Cys Ala Thr Ser Gly Phe Thr Phe 35 40 45 Ser
Asp Tyr Phe Met Tyr Trp Ile Arg Gln Thr Pro Glu Lys Arg Leu 50 55
60 Glu Trp Val Ala Tyr Ile Ser Asn Gly Gly Asp Ser Ser Ser Tyr Pro
65 70 75 80 Asp Thr Val Lys Gly Arg Phe Thr Ile Ser Arg Asp Asn Ala
Lys Asn 85 90 95 Thr Leu Tyr Leu Gln Met Ser Arg Leu Lys Ser Glu
Asp Thr Ala Met 100 105 110 Tyr Tyr Cys Ala Thr Asn Lys Asn Trp Asp
Asp Tyr Tyr Asp Met Asp 115 120 125 Tyr Trp Gly Gln Gly Thr Ser Val
Thr Val Ser Ser Ala Ser Thr Lys 130 135 140 Gly Pro Ser Val Phe Pro
Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu 145 150 155 160 Ser Thr Ala
Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu Pro 165 170 175 Val
Thr Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val His Thr 180 185
190 Phe Pro Ala Val Leu Gln Ser Ser Gly Leu Tyr Ser Leu Ser Ser Val
195 200 205 Val Thr Val Pro Ser Ser Ser Leu Gly Thr Lys Thr Tyr Thr
Cys Asn 210 215 220 Val Asp His Lys Pro Ser Asn Thr Lys Val Asp Lys
Arg Val Glu Ser 225 230 235 240 Lys 46241PRTArtificial
sequence/note = "Fab 0051, mouse VH - human IgG4 CH1" 46Met Gly Trp
Ser Cys Ile Ile Phe Phe Leu Val Ala Thr Ala Thr Gly 1 5 10 15 Val
His Ser Gln Val Gln Leu Glu Gln Ser Gly Ala Glu Leu Val Arg 20 25
30 Pro Gly Val Ser Val Lys Ile Ser Cys Lys Gly Ser Gly Tyr Thr Phe
35 40 45 Thr Asp Tyr Ser Met His Trp Val Lys Gln Ser His Ala Lys
Ser Leu 50 55 60 Glu Trp Ile Gly Val Ile Ser Thr Tyr Tyr Gly Asp
Val Arg Tyr Asn 65 70 75 80 Gln Lys Phe Lys Gly Lys Ala Thr Met Thr
Val Asp Lys Ser Ser Ser 85 90 95 Thr Ala Tyr Met Ala Leu Ala Arg
Leu Thr Ser Glu Asp Ser Ala Ile 100 105 110 Tyr Tyr Cys Ala Arg Ala
Pro Met Ile Thr Thr Gly Ala Trp Phe Ala 115 120 125 Tyr Trp Gly Gln
Gly Thr Leu Val Thr Val Ser Ala Ala Ser Thr Lys 130 135 140 Gly Pro
Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu 145 150 155
160 Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu Pro
165 170 175 Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val
His Thr 180 185 190 Phe Pro Ala Val Leu Gln Ser Ser Gly Leu Tyr Ser
Leu Ser Ser Val 195 200 205 Val Thr Val Pro Ser Ser Ser Leu Gly Thr
Lys Thr Tyr Thr Cys Asn 210 215 220 Val Asp His Lys Pro Ser Asn Thr
Lys Val Asp Lys Arg Val Glu Ser 225 230 235 240 Lys
47242PRTArtificial sequence/note = "Fab 0052, mouse VH - human IgG4
CH1" 47Met Glu Trp Thr Trp Val Phe Leu Phe Leu Leu Ser Val Thr Ala
Gly 1 5 10 15 Val His Ser Gln Val Gln Leu Gln Gln Ser Gly Ala Glu
Pro Met Lys 20 25 30 Pro Gly Ala Ser Val Lys Ile Ser Cys Lys Ala
Thr Gly Tyr Thr Phe 35 40 45 Ser Ser His Trp Ile Glu Trp Ile Lys
Gln Arg Pro Gly His Gly Leu 50 55 60 Glu Trp Ile Gly Glu Ile Leu
Pro Gly Ser Gly Asn Thr Asn Tyr Asn 65 70 75 80 Glu Lys Phe Lys Gly
Lys Ala Thr Phe Thr Ala Asp Thr Ser Ser Asn 85 90 95 Thr Ala Tyr
Met Gln Leu Ser Ser Leu Thr Ser Glu Asp Ser Ala Val 100 105 110 Tyr
Cys Cys Ala Arg Gly Tyr Tyr Gly Leu Asn Tyr Asp Trp Tyr Phe 115 120
125 Asp Val Trp Gly Ala Gly Thr Thr Val Thr Val Ser Ser Ala Ser Thr
130 135 140 Lys Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser
Thr Ser 145 150 155 160 Glu Ser Thr Ala Ala Leu Gly Cys Leu Val Lys
Asp Tyr Phe Pro Glu 165 170 175 Pro Val Thr Val Ser Trp Asn Ser Gly
Ala Leu Thr Ser Gly Val His 180 185 190 Thr Phe Pro Ala Val Leu Gln
Ser Ser Gly Leu Tyr Ser Leu Ser Ser 195 200 205 Val Val Thr Val Pro
Ser Ser Ser Leu Gly Thr Lys Thr Tyr Thr Cys 210 215 220 Asn Val Asp
His Lys Pro Ser Asn Thr Lys Val Asp Lys Arg Val Glu 225 230 235 240
Ser Lys 48233PRTArtificial sequence/note = "Fab 0082, mouse VH -
human IgG4 CH1" 48Met Asp Phe Gly Leu Ile Phe Phe Ile Val Ala Leu
Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu Ser Gly
Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu Ser Cys
Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met Thr Trp
Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile Gly Glu
Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Ala Pro 65 70 75 80 Ser Leu
Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85 90 95
Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu Tyr 100
105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly Thr Leu
Val 115 120 125 Thr Val Ser Ala Ala Ser Thr Lys Gly Pro Ser Val Phe
Pro Leu Ala 130 135 140 Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr Ala
Ala Leu Gly Cys Leu 145 150 155 160 Val Lys Asp Tyr Phe Pro Glu Pro
Val Thr Val Ser Trp Asn Ser Gly 165 170 175 Ala Leu Thr Ser Gly Val
His Thr Phe Pro Ala Val Leu Gln Ser Ser 180 185 190 Gly Leu Tyr Ser
Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu 195 200 205 Gly Thr
Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser Asn Thr 210 215 220
Lys Val Asp Lys Arg Val Glu Ser Lys 225 230 497PRTArtificial
sequence/note = "linker, L2" 49Gly Ser Gly Gly Gly Gly Ser 1 5
5012PRTArtificial sequence/note = "linker, L3" 50Gly Ser Gly Gly
Gly Gly Ser Gly Gly Gly Gly Ser 1 5 10 5117PRTArtificial
sequence/note = "linker, L4a" 51Gly Ser Gly Gly Gly Gly Ser Gly Gly
Gly Gly Ser Gly Gly Gly Gly 1 5 10 15 Ser 5217PRTArtificial
sequence/note = "linker, L4b" 52Gly Gly Gly Gly Ser Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly 1 5 10 15 Ser 5322PRTArtificial
sequence/note = "linker, L5" 53Gly Gly Gly Gly Ser Gly Ser Gly Gly
Gly Gly Ser Gly Gly Gly Gly 1 5 10 15 Ser Gly Gly Gly Gly Ser 20
5427PRTArtificial sequence/note = "linker, L6" 54Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly Ser Gly Gly Gly Gly 1 5 10 15 Ser Gly
Gly Gly Gly Ser Gly Gly Gly Gly Ser 20 25 5532PRTArtificial
sequence/note = "linker, L7" 55Gly Gly Gly Gly Ser Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly 1 5 10 15 Ser Gly Gly Gly Gly Ser Gly
Gly Gly Gly Ser Gly Gly Gly Gly Ser 20 25 30 5637PRTArtificial
sequence/note = "linker, L8" 56Gly Gly Gly Gly Ser Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly 1 5 10 15 Gly Gly Gly Ser Gly Ser Gly
Gly Gly Gly Ser Gly Gly Gly Gly Ser 20 25 30 Gly Gly Gly Gly Ser 35
5742PRTArtificial sequence/note = "linker, L9" 57Gly Gly Gly Gly
Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly 1 5 10 15 Gly Gly
Gly Ser Gly Gly Gly Gly Ser Gly Ser Gly Gly Gly Gly Ser 20 25 30
Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser 35 40 5816PRTArtificial
sequence/note = "linker, L10" 58Tyr Gly Pro Pro Ser Pro Ser Ser Pro
Ala Pro Glu Phe Leu Gly Gly 1 5 10 15 5912PRTArtificial
sequence/note = "Purification tag, HPC4 tag" 59Glu Asp Gln Val Asp
Pro Arg Leu Ile Asp Gly Lys 1 5 10 6028DNAArtificial sequence/note
= "primer no. 50" 60caacacttac ttgtcctggt tcctgcag
286128DNAArtificial sequence/note = "primer no. 51" 61ctgcaggaac
caggacaagt aagtgttg 286236DNAArtificial sequence/note = "primer no.
69" 62gctctagact aacactcatt cctgttgaag ctcttg 366339DNAArtificial
sequence/note = "primer no. 98" 63tttaaagaat tcctaacact ctcccctgtt
gaagctctt 396439DNAArtificial sequence/note = "primer no. 100"
64tttaaagaat tctcatttac ccagagacag ggagaggct 396521DNAArtificial
sequence/note = "primer no. 312" 65gtctaccaca acacacgtga c
216627DNAArtificial sequence/note = "primer no. 339" 66actggatggt
gggaagatgg atacagt 276727DNAArtificial sequence/note = "primer no.
341" 67agatccaggg gctagcggat agacaga 276830DNAArtificial
sequence/note = "primer no. 348" 68ggagctggtg gtggcatctc aggacctttg
306930DNAArtificial sequence/note = "primer no. 347" 69cctgtaggac
cagagggctc caaggacact 307048DNAArtificial sequence/note = "primer
no. 448" 70tttaaaaagc ttgccgccac catggagacc cctgcctggc cccgggtc
487148DNAArtificial sequence/note = "primer no. 449" 71tttaaagaat
tcctattctc taaattcccc tttctcctgg cccataca 487275DNAArtificial
sequence/note = "primer no. 466" 72ggaggtggcg ggtctggtgg cgggggatca
ggcgggggag gttcctcagg cactacaaat 60actgtggcag catat
757375DNAArtificial sequence/note = "primer no. 467" 73ggaacctccc
ccgcctgatc ccccgccacc agacccgcca cctccttctc taaattcccc 60tttctcctgg
cccat 757465DNAArtificial sequence/note = "primer no. 483"
74aaatttaagc ttactagtcc tgcaggttta aacgaatttg gatccggagg tggcgggtct
60ggtgg 657548DNAArtificial sequence/note = "primer no. 484"
75gaatttagcg gccgcgaatt cggatccgga acctcccccg cctgatcc
487681DNAArtificial sequence/note = "primer no. 485" 76aaatttgaat
tcttacttgc cgtcgatcag tctggggtcc acctggtcct cacactctcc 60cctgttgaag
ctctttgtga c 817730DNAArtificial sequence/note = "primer no. 486"
77acggatctct agcaagcttc gtacggtggc 307881DNAArtificial
sequence/note = "primer no. 487" 78aaatttgaat tcttacttgc cgtcgatcag
tctggggtcc acctggtcct ctttggactc 60aactctcttg tccaccttgg t
817945DNAArtificial sequence/note = "primer no. 488" 79aaatttgaat
tcttatttgg actcaactct cttgtccacc ttggt 458030DNAArtificial
sequence/note = "primer no. 489" 80acggatctct agcaagcttg ctagcaccaa
308154DNAArtificial sequence/note = "primer no. 490" 81aaatttaagc
ttgccgccac catggatttt gggctgattt tttttattgt tgct
548245DNAArtificial sequence/note = "primer no. 491" 82aaatttgcta
gctgcagaga cagtgaccag agtcccttgg cccca 458351DNAArtificial
sequence/note = "primer no. 492" 83aaatttaagc ttgccgccac catgaagtca
cagacccagg tcttcgtatt t 518451DNAArtificial sequence/note = "primer
no. 493" 84aaatttaagc ttgccgccac catgaagttg cctgttgggc tgttggtgct g
518538DNAArtificial sequence/note = "primer no. 494" 85aaatttcgta
cgttctattt ccagcttggt cccccctc 388642DNAArtificial sequence/note =
"primer no. 495" 86aaatttcgta cgttttattt ccagcttggt cccccctccg aa
428769DNAArtificial sequence/note = "primer no. 512" 87aaatttggat
ccgaggtgaa acttctcgag tctggaggtg gcctggtgca gcctggaggt 60tccctgaaa
698836DNAArtificial sequence/note = "primer no. 513" 88tttaaaggat
tctttaccca gagacaggga gaggct 368942DNAArtificial sequence/note =
"primer no. 514" 89aaatttggat cctttggact caactctctt gtccaccttg gt
429054DNAArtificial sequence/note = "primer no. 546" 90aaatttaagc
ttgccgccac catgaacttg gggctcagct tgattttcct tgtc
549142DNAArtificial sequence/note = "primer no. 547" 91aaatttgcta
gctgaggaga cggtgactga ggttccttga cc 429254DNAArtificial
sequence/note = "primer no. 548" 92aaatttaagc ttgccgccac catggattca
caggcccagg ttcttatatt gctg 549342DNAArtificial sequence/note =
"primer no. 549" 93aaatttcgta cgtttcagct ccagcttggt cccagcaccg aa
429448DNAArtificial sequence/note = "primer no. 551" 94aaatttaaat
ttggatccga tgttgtgatg acccaaactc cactctcc 489542DNAArtificial
sequence/note = "primer no. 552" 95aaatttaaat ttggatccac actctcccct
gttgaagctc tt 429654DNAArtificial sequence/note = "primer no. 572"
96aaatttaagc ttgccgccac catggatttt gggctgattt tttttattgt tgct
549749DNAArtificial sequence/note = "primer no. 574" 97aaatttaagc
ttgccgccac catgaagttg cctgttgggc tgttggtgc 499884DNAArtificial
sequence/note = "primer no. 583" 98aaatttggat ccggaacctc ccccgcctga
tcccccgcca ccagacccgc cacctccaca 60ctctcccctg ttgaagctct ttgt
849999DNAArtificial sequence/note = "primer no. 584" 99aaatttggat
ccagacccgc cacctccgga acctcccccg cctgatcccc cgccaccaga 60cccgccacct
ccacactctc ccctgttgaa gctctttgt 9910069DNAArtificial sequence/note
= "primer no. 585" 100aaatttggat cctgatcccc cgccaccaga cccgccacct
ccacactctc ccctgttgaa 60gctctttgt 6910169DNAArtificial
sequence/note = "primer no. 586" 101aaatttggat ccggtggcgg
gggatcaggc gggggaggtt cctcaggcac tacaaatact 60gtggcagca
6910287DNAArtificial sequence/note = "primer no. 587" 102aaatttggat
ccggaacctc ccccgcctga tcccccgcca ccagacccgc cacctccttt 60acccagagac
agggagaggc tcttctg 87103102DNAArtificial sequence/note = "primer
no. 588" 103aaatttggat ccagacccgc cacctccgga acctcccccg cctgatcccc
cgccaccaga 60cccgccacct cctttaccca gagacaggga gaggctcttc tg
10210472DNAArtificial sequence/note = "primer no. 589"
104aaatttggat cctgatcccc cgccaccaga cccgccacct cctttaccca
gagacaggga 60gaggctcttc tg 7210554DNAArtificial sequence/note =
"primer no. 590" 105aaatttggat ccagacccgc cacctccaca ctctcccctg
ttgaagctct ttgt 54106114DNAArtificial sequence/note = "primer no.
591" 106aaatttggat ccagacccgc cacctccaga cccgccacct ccggaacctc
ccccgcctga 60tcccccgcca ccagacccgc cacctccaca ctctcccctg ttgaagctct
ttgt 11410757DNAArtificial sequence/note = "primer no. 592"
107aaatttggat cctgatcccc cgccaccttt acccagagac agggagaggc tcttctg
57108117DNAArtificial sequence/note = "primer no. 593"
108aaatttggat ccagacccgc cacctccaga cccgccacct ccggaacctc
ccccgcctga 60tcccccgcca ccagacccgc cacctccttt acccagagac agggagaggc
tcttctg 11710945DNAArtificial sequence/note = "primer no. 598"
109ggaaacacct attttcattg ggccctgcag aaaccaggcc agtct
4511045DNAArtificial sequence/note = "primer no. 599" 110agactggcct
ggtttctgca gggcccaatg aaaataggtg tttcc 4511136DNAArtificial
sequence/note = "primer no. 610" 111gctctagact aacactcatt
cctgttgaag ctcttg 3611238DNAArtificial sequence/note = "primer no.
613" 112aaaaatctag aatagacaga tgggggtgtc gttttggc
3811334DNAArtificial sequence/note = "primer no. 614" 113aaaaatctag
acttgaccag gcatcctaga gtca 3411435DNAArtificial sequence/note =
"primer no. 615" 114aaaaatctag aaggggccag tggatagact gatgg
3511535DNAArtificial sequence/note = "primer no. 616" 115aaaaatctag
aagggaccaa gggatagaca gatgg 3511650DNAArtificial sequence/note =
"primer no. 617" 116aaatttaagc ttgccgccac catggaatgg acctgggtct
ttctcttcct 5011739DNAArtificial sequence/note = "primer no. 618"
117aaatttgcta gctgaggaga cggtgaccgt ggtccctgc 3911848DNAArtificial
sequence/note = "primer no. 619" 118aaatttaagc ttgccgccac
catgatgtcc tctgctcagt tccttggt 4811939DNAArtificial sequence/note =
"primer no. 620" 119aaatttcgta cgtttcatct ccagtttggt cccccctcc
3912050DNAArtificial sequence/note = "primer no. 627" 120aaatttaagc
ttgccgccac catgggttgg agctgtatca tcttctttct 5012139DNAArtificial
sequence/note = "primer no. 628" 121aaatttgcta gctgcagaga
cagtgaccag agtcccttg 3912245DNAArtificial sequence/note = "primer
no. 682" 122gatagcagta cgataaacta taacccatct ctaaaggata aattc
4512345DNAArtificial sequence/note = "primer no. 683" 123gaatttatcc
tttagagatg ggttatagtt tatcgtactg ctatc 4512445DNAArtificial
sequence/note = "primer no. 684" 124tctgaggact ctgccgtcta
ttactgtgca agagggtact acggt 4512545DNAArtificial sequence/note =
"primer no. 685" 125accgtagtac cctcttgcac agtaatagac ggcagagtcc
tcaga 4512681DNAArtificial sequence/note = "primer no. 686"
126tgctgccaca gtatttgtag tgcctgatcc ccccaggaac tcaggtgctg
gggatgatgg 60ggatggggga ccatatttgg a 8112751DNAArtificial
sequence/note = "primer no. 687" 127ccagcacctg agttcctggg
gggatcaggc actacaaata ctgtggcagc a 5112845DNAArtificial
sequence/note = "primer no. 688" 128gatagcagta cgataaacta
tgcgccatct ctaaaggata aattc 4512945DNAArtificial sequence/note =
"primer no. 689" 129gaatttatcc tttagagatg gcgcatagtt tatcgtactg
ctatc 4513054DNAArtificial sequence/note = "primer no. 699"
130aaatttggat ccggcggggg aggttcctca ggcactacaa atactgtggc agca
5413139DNAArtificial sequence/note = "primer no. 700" 131aaatttggat
cctcaggcac tacaaatact gtggcagca 3913257DNAArtificial sequence/note
= "primer no. 701" 132accaaggtgg acaagagagt tgagtccaaa tcaggcacta
caaatactgt ggcagca 5713360DNAArtificial sequence/note = "primer no.
702" 133tgctgccaca gtatttgtag tgcctgattt ggactcaact ctcttgtcca
ccttggtgtt 6013457DNAArtificial sequence/note = "primer no. 703"
134gtcacaaaga gcttcaacag gggagagtgt tcaggcacta caaatactgt ggcagca
5713557DNAArtificial sequence/note = "primer no. 704" 135tgctgccaca
gtatttgtag tgcctgaaca ctctcccctg ttgaagctct ttgtgac
5713660DNAArtificial sequence/note = "primer no. 800" 136cagaagagcc
tctccctgtc tctgggtaaa tcaggcacta caaatactgt ggcagcatat
6013760DNAArtificial sequence/note = "primer no. 801" 137atatgctgcc
acagtatttg tagtgcctga tttacccaga gacagggaga ggctcttctg
6013849DNAArtificial sequence/note = "primer no. 842" 138aaatttaagc
ttgccgccac catgaggtgc ctagctgagt tcctggggc 4913945DNAArtificial
sequence/note = "primer no. 843" 139aaatttcgta cgttttattt
ccaactttgt ccccgagccg aacgt 4514049DNAArtificial sequence/note =
"primer no. 844" 140aaatttaagc ttgccgccac catggaatgg agcggggtct
ttatctttc 4914139DNAArtificial sequence/note = "primer no. 845"
141aaatttgcta gctgaggaga cggtgactga ggttccttg 3914255DNAArtificial
sequence/note = "primer 1000" 142ctgtctctgg gtaaacacca tcaccaccac
cactgagaat tccccgacct cgacc 5514355DNAArtificial sequence/note =
"primer no. 1001" 143gaggtcgggg aattctcagt ggtggtggtg atggtgttta
cccagagaca gggag 5514448DNAArtificial sequence/note = "primer no.
1002" 144ctcttttaaa aggggtccag tgtgagtcca aatatggtcc cccatgcc
4814550DNAArtificial sequence/note = "primer no. 1003"
145catgggggac catatttgga ctcacactgg acccctttta aaagagcaac
50146233PRTArtificial sequence/note = "0061VH-CH1" 146Met Asp Phe
Gly Leu Ile Phe Phe Ile Val Ala Leu Leu Lys Gly Val 1 5 10 15 Gln
Cys Glu Val Lys Leu Leu Glu Ser Gly Gly Gly Leu Val Gln Pro 20 25
30 Gly Gly Ser Leu Lys Leu Ser Cys Ala Ala Ser Gly Phe Asp Phe Ser
35 40 45 Arg Tyr Trp Met Thr Trp Val Arg Gln Ala Pro Gly Lys Gly
Leu Glu 50 55 60 Trp Ile Gly Glu Ile Asn Pro Asp Ser Ser Thr Ile
Asn Tyr Asn Pro 65 70 75 80 Ser Leu Lys Asp Lys Phe Ile Ile Ser Arg
Asp Asn Ala Lys Asn Thr 85 90 95 Leu Tyr Leu Gln Met Ser Glu Val
Arg Ser Glu Asp Thr Ala Leu Tyr 100 105 110 Tyr Cys Ala Ser Gly Val
Phe Thr Ser Trp Gly Gln Gly Thr Leu Val 115 120 125 Thr Val Ser Ala
Ala Ser Thr Lys Gly Pro Ser Val Phe Pro Leu Ala 130 135 140 Pro Cys
Ser Arg Ser Thr Ser Glu Ser Thr Ala Ala Leu Gly Cys Leu 145 150 155
160 Val Lys Asp Tyr Phe Pro Glu Pro Val Thr Val Ser Trp Asn Ser Gly
165 170 175 Ala Leu Thr Ser Gly Val His Thr Phe Pro Ala Val Leu Gln
Ser Ser 180 185 190 Gly Leu Tyr Ser Leu Ser Ser Val Val Thr Val Pro
Ser Ser Ser Leu 195 200 205 Gly Thr Lys Thr Tyr Thr Cys Asn Val Asp
His Lys Pro Ser Asn Thr 210 215 220 Lys Val Asp Lys Arg Val Glu Ser
Lys 225 230 147247PRTArtificial sequence/note =
"hIgG4-hinge-CH2-CH3" 147Met Asp Phe Gly Leu Ile Phe Phe Ile Val
Ala Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Ser Lys Tyr Gly Pro
Pro Cys Pro Pro Cys Pro Ala Pro 20 25 30 Glu Phe Leu Gly Gly Pro
Ser Val Phe Leu Phe Pro Pro Lys Pro Lys 35 40 45 Asp Thr Leu Met
Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val 50 55 60 Asp Val
Ser Gln Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val Asp 65 70 75 80
Gly Val Glu Val His Asn Ala Lys Thr Lys Pro Arg Glu Glu Gln Phe 85
90 95 Asn Ser Thr Tyr Arg Val Val Ser Val Leu Thr Val Leu His Gln
Asp 100 105 110 Trp Leu Asn Gly Lys Glu Tyr Lys Cys Lys Val Ser Asn
Lys Gly Leu 115 120 125 Pro Ser Ser Ile Glu Lys Thr Ile Ser Lys Ala
Lys Gly Gln Pro Arg 130 135 140 Glu Pro Gln Val Tyr Thr Leu Pro Pro
Ser Gln Glu Glu Met Thr Lys 145 150 155 160 Asn Gln Val Ser Leu Thr
Cys Leu Val Lys Gly Phe Tyr Pro Ser Asp 165 170 175 Ile Ala Val Glu
Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys 180 185 190 Thr Thr
Pro Pro Val Leu Asp Ser Asp Gly Ser Phe Phe Leu Tyr Ser 195 200 205
Arg Leu Thr Val Asp Lys Ser Arg Trp Gln Glu Gly Asn Val Phe Ser 210
215 220 Cys Ser Val Met His Glu Ala Leu His Asn His Tyr Thr Gln Lys
Ser 225 230 235 240 Leu Ser Leu Ser Leu Gly Lys 245
1486PRTArtificial sequence/note = "His6 tag" 148His His His His His
His 1 5 149172PRTArtificial sequence/note = "hTLT-1.18-188" 149Met
Ile Val Gly Ser Leu Pro Glu Val Leu Gln Ala Pro Val Gly Ser 1 5 10
15 Ser Ile Leu Val Gln Cys His Tyr Arg Leu Gln Asp Val Lys Ala Gln
20 25 30 Lys Val Trp Cys Arg Phe Leu Pro Glu Gly Cys Gln Pro Leu
Val Ser 35 40 45 Ser Ala Val Asp Arg Arg Ala Pro Ala Gly Arg Arg
Thr Phe Leu Thr 50 55 60 Asp Leu Gly Gly Gly Leu Leu Gln Val Glu
Met Val Thr Leu Gln Glu 65 70 75 80 Glu Asp Ala Gly Glu Tyr Gly Cys
Met Val Asp Gly Ala Arg Gly Pro 85 90 95 Gln Ile Leu His Arg Val
Ser Leu Asn Ile Leu Pro Pro Glu Glu Glu 100 105 110 Glu Glu Thr His
Lys Ile Gly Ser Leu Ala Glu Asn Ala Phe Ser Asp 115 120 125 Pro Ala
Gly Ser Ala Asn Pro Leu Glu Pro Ser Gln Asp Glu Lys Ser 130 135 140
Ile Pro Leu Ile Trp Gly Ala Val Leu Leu Val Gly Leu Leu Val Ala 145
150 155 160 Ala Val Val Leu Phe Ala Val Met Ala Lys Arg Lys 165 170
15032DNAArtificial sequence/note = "primer no. 1004" 150ggaattccat
atgatagttg gcagcctccc tg 3215139DNAArtificial sequence/note =
"primer no. 1005" 151ataagaatgc ggccgcctat ttcctcttgg ccatcacag
39152215PRTArtificial sequence/note = "Fab 0100 HC" 152Glu Val Lys
Leu Leu Glu Ser Gly Gly Gly Leu Val Gln Pro Gly Gly 1 5 10 15 Ser
Leu Lys Leu Ser Cys Ala Ala Ser Gly Phe Asp Phe Ser Arg Tyr 20 25
30 Trp Met Thr Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu Trp Ile
35 40 45 Gly Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Asn Pro
Ser Leu 50 55 60 Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys
Asn Thr Leu Tyr 65 70 75 80 Leu Gln Met Ser Glu Val Arg Ser Glu Asp
Thr Ala Leu Tyr Tyr Cys 85 90 95 Ala Ser Gly Val Phe Thr Ser Trp
Gly Gln Gly Thr Leu Val Thr Val 100 105 110 Ser Ala Ala Ser Thr Lys
Gly Pro Ser Val Phe Pro Leu Ala Pro Cys 115 120 125 Ser Arg Ser Thr
Ser Glu Ser Thr Ala Ala Leu Gly Cys Leu Val Lys 130 135 140 Asp Tyr
Phe Pro Glu Pro Val Thr Val Ser Trp Asn Ser Gly Ala Leu 145 150 155
160 Thr Ser Gly Val His Thr Phe Pro Ala Val Leu Gln Ser Ser Gly Leu
165 170 175 Tyr Ser Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu
Gly Thr 180 185 190 Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser
Asn Thr Lys Val 195 200 205 Asp Lys Arg Val Glu Ser Lys 210 215
153219PRTArtificial sequence/note = "Fab 0100 LC" 153Asp Val Val
Met Thr Gln Thr Pro Leu Ser Leu Pro Val Ser Leu Gly 1 5 10 15 Asp
Gln Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu Val His Arg 20 25
30 Asn Gly Asn Thr Tyr Phe His Trp Ala Leu Gln Lys Pro Gly Gln Ser
35 40 45 Pro Lys Leu Leu Ile Tyr Lys Val Ser Asn Arg Phe Ser Gly
Val Pro 50 55 60 Asp Arg Phe Ser Gly Ser Gly Ser Gly Thr Asp Phe
Thr Leu Lys Ile 65 70 75 80 Ser Arg Val Glu Ala Glu Asp Leu Gly Val
Tyr Phe Cys Ser Gln Ser 85 90 95 Thr His Val Pro Tyr Thr Phe Gly
Gly Gly Thr Lys Leu Glu Ile Lys 100 105 110 Arg Thr Val Ala Ala Pro
Ser Val Phe Ile Phe Pro Pro Ser Asp Glu 115 120 125 Gln Leu Lys Ser
Gly Thr Ala Ser Val Val Cys Leu Leu Asn Asn Phe 130 135 140 Tyr Pro
Arg Glu Ala Lys Val Gln Trp Lys Val Asp Asn Ala Leu Gln 145 150 155
160 Ser Gly Asn Ser Gln Glu Ser Val Thr Glu Gln Asp Ser Lys Asp Ser
165 170 175 Thr Tyr Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys Ala Asp
Tyr Glu 180 185 190 Lys His Lys Val Tyr Ala Cys Glu Val Thr His Gln
Gly Leu Ser Ser 195 200 205 Pro Val Thr Lys Ser Phe Asn Arg Gly Glu
Cys 210 215 1546588DNAHomo sapiens 154gcgcagctgc gccagtttta
tgtggcggcg cagggcatta gctggagcta tcgcccggaa 60ccgaccaaca gcagcctgaa
cctgagcgtg accagcttta aaaaaattgt gtatcgcgaa 120tatgaaccgt
attttaaaaa agaaaaaccg cagagcacca ttagcggcct gctgggcccg
180accctgtatg cggaagtggg cgatattatt aaagtgcatt ttaaaaacaa
agcggataaa 240ccgctgagca ttcatccgca gggcattcgc tatagcaaac
tgagcgaagg cgcgagctat 300ctggatcata cctttccggc ggaaaaaatg
gatgatgcgg tggcgccggg ccgcgaatat 360acctatgaat ggagcattag
cgaagatagc ggcccgaccc atgatgatcc gccgtgcctg 420acccatattt
attatagcca tgaaaacctg attgaagatt ttaacagcgg cctgattggc
480ccgctgctga tttgcaaaaa aggcaccctg accgaaggcg gcacccagaa
aacctttgat 540aaacagattg tgctgctgtt tgcggtgttt gatgaaagca
aaagctggag ccagagcagc 600agcctgatgt ataccgtgaa cggctatgtg
aacggcacca tgccggatat taccgtgtgc 660gcgcatgatc atattagctg
gcatctgctg ggcatgagca gcggcccgga actgtttagc 720attcatttta
acggccaggt gctggaacag aaccatcata aagtgagcgc gattaccctg
780gtgagcgcga ccagcaccac cgcgaacatg accgtgggcc cggaaggcaa
atggattatt 840agcagcctga ccccgaaaca tctgcaggcg ggcatgcagg
cgtatattga tattaaaaac 900tgcccgaaaa aaacccgcaa cctgaaaaaa
attacccgcg aacagcgccg ccatatgaaa 960cgctgggaat attttattgc
ggcggaagaa gtgatttggg attatgcgcc ggtgattccg 1020gcgaacatgg
ataaaaaata tcgcagccag catctggata actttagcaa ccagattggc
1080aaacattata aaaaagtgat gtatacccag tatgaagatg aaagctttac
caaacatacc 1140gtgaacccga acatgaaaga agatggcatt ctgggcccga
ttattcgcgc gcaggtgcgc 1200gataccctga aaattgtgtt taaaaacatg
gcgagccgcc cgtatagcat ttatccgcat 1260ggcgtgacct ttagcccgta
tgaagatgaa gtgaacagca gctttaccag cggccgcaac 1320aacaccatga
ttcgcgcggt gcagccgggc gaaacctata cctataaatg gaacattctg
1380gaatttgatg aaccgaccga aaacgatgcg cagtgcctga cccgcccgta
ttatagcgat 1440gtggatatta tgcgcgatat tgcgagcggc ctgattggcc
tgctgctgat ttgcaaaagc 1500cgcagcctgg atcgccgcgg cattcagcgc
gcggcggata ttgaacagca ggcggtgttt 1560gcggtgtttg atgaaaacaa
aagctggtat ctggaagata acattaacaa attttgcgaa 1620aacccggatg
aagtgaaacg cgatgatccg aaattttatg aaagcaacat tatgagcacc
1680attaacggct atgtgccgga aagcattacc accctgggct
tttgctttga tgataccgtg 1740cagtggcatt tttgcagcgt gggcacccag
aacgaaattc tgaccattca ttttaccggc 1800catagcttta tttatggcaa
acgccatgaa gataccctga ccctgtttcc gatgcgcggc 1860gaaagcgtga
ccgtgaccat ggataacgtg ggcacctgga tgctgaccag catgaacagc
1920agcccgcgca gcaaaaaact gcgcctgaaa tttcgcgatg tgaaatgcat
tccggatgat 1980gatgaagata gctatgaaat ttttgaaccg ccggaaagca
ccgtgatggc gacccgcaaa 2040atgcatgatc gcctggaacc ggaagatgaa
gaaagcgatg cggattatga ttatcagaac 2100cgcctggcgg cggcgctggg
cattcgcagc tttcgcaaca gcagcctgaa ccaggaagaa 2160gaagaattta
acctgaccgc gctggcgctg gaaaacggca ccgaatttgt gagcagcaac
2220accgatatta ttgtgggcag caactatagc agcccgagca acattagcaa
atttaccgtg 2280aacaacctgg cggaaccgca gaaagcgccg agccatcagc
aggcgaccac cgcgggcagc 2340ccgctgcgcc atctgattgg caaaaacagc
gtgctgaaca gcagcaccgc ggaacatagc 2400agcccgtata gcgaagatcc
gattgaagat ccgctgcagc cggatgtgac cggcattcgc 2460ctgctgagcc
tgggcgcggg cgaatttaaa agccaggaac atgcgaaaca taaaggcccg
2520aaagtggaac gcgatcaggc ggcgaaacat cgctttagct ggatgaaact
gctggcgcat 2580aaagtgggcc gccatctgag ccaggatacc ggcagcccga
gcggcatgcg cccgtgggaa 2640gatctgccga gccaggatac cggcagcccg
agccgcatgc gcccgtggaa agatccgccg 2700agcgatctgc tgctgctgaa
acagagcaac agcagcaaaa ttctggtggg ccgctggcat 2760ctggcgagcg
aaaaaggcag ctatgaaatt attcaggata ccgatgaaga taccgcggtg
2820aacaactggc tgattagccc gcagaacgcg agccgcgcgt ggggcgaaag
caccccgctg 2880gcgaacaaac cgggcaaaca gagcggccat ccgaaatttc
cgcgcgtgcg ccataaaagc 2940ctgcaggtgc gccaggatgg cggcaaaagc
cgcctgaaaa aaagccagtt tctgattaaa 3000acccgcaaaa aaaaaaaaga
aaaacatacc catcatgcgc cgctgagccc gcgcaccttt 3060catccgctgc
gcagcgaagc gtataacacc tttagcgaac gccgcctgaa acatagcctg
3120gtgctgcata aaagcaacga aaccagcctg ccgaccgatc tgaaccagac
cctgccgagc 3180atggattttg gctggattgc gagcctgccg gatcataacc
agaacagcag caacgatacc 3240ggccaggcga gctgcccgcc gggcctgtat
cagaccgtgc cgccggaaga acattatcag 3300acctttccga ttcaggatcc
ggatcagatg catagcacca gcgatccgag ccatcgcagc 3360agcagcccgg
aactgagcga aatgctggaa tatgatcgca gccataaaag ctttccgacc
3420gatattagcc agatgagccc gagcagcgaa catgaagtgt ggcagaccgt
gattagcccg 3480gatctgagcc aggtgaccct gagcccggaa ctgagccaga
ccaacctgag cccggatctg 3540agccatacca ccctgagccc ggaactgatt
cagcgcaacc tgagcccggc gctgggccag 3600atgccgatta gcccggatct
gagccatacc accctgagcc cggatctgag ccataccacc 3660ctgagcctgg
atctgagcca gaccaacctg agcccggaac tgagccagac caacctgagc
3720ccggcgctgg gccagatgcc gctgagcccg gatctgagcc ataccaccct
gagcctggat 3780tttagccaga ccaacctgag cccggaactg agccatatga
ccctgagccc ggaactgagc 3840cagaccaacc tgagcccggc gctgggccag
atgccgatta gcccggatct gagccatacc 3900accctgagcc tggattttag
ccagaccaac ctgagcccgg aactgagcca gaccaacctg 3960agcccggcgc
tgggccagat gccgctgagc ccggatccga gccataccac cctgagcctg
4020gatctgagcc agaccaacct gagcccggaa ctgagccaga ccaacctgag
cccggatctg 4080agcgaaatgc cgctgtttgc ggatctgagc cagattccgc
tgaccccgga tctggatcag 4140atgaccctga gcccggatct gggcgaaacc
gatctgagcc cgaactttgg ccagatgagc 4200ctgagcccgg atctgagcca
ggtgaccctg agcccggata ttagcgatac caccctgctg 4260ccggatctga
gccagattag cccgccgccg gatctggatc agatttttta tccgagcgaa
4320agcagccaga gcctgctgct gcaggaattt aacgaaagct ttccgtatcc
ggatctgggc 4380cagatgccga gcccgagcag cccgaccctg aacgatacct
ttctgagcaa agaatttaac 4440ccgctggtga ttgtgggcct gagcaaagat
ggcaccgatt atattgaaat tattccgaaa 4500gaagaagtgc agagcagcga
agatgattat gcggaaattg attatgtgcc gtatgatgat 4560ccgtataaaa
ccgatgtgcg caccaacatt aacagcagcc gcgatccgga taacattgcg
4620gcgtggtatc tgcgcagcaa caacggcaac cgccgcaact attatattgc
ggcggaagaa 4680attagctggg attatagcga atttgtgcag cgcgaaaccg
atattgaaga tagcgatgat 4740attccggaag ataccaccta taaaaaagtg
gtgtttcgca aatatctgga tagcaccttt 4800accaaacgcg atccgcgcgg
cgaatatgaa gaacatctgg gcattctggg cccgattatt 4860cgcgcggaag
tggatgatgt gattcaggtg cgctttaaaa acctggcgag ccgcccgtat
4920agcctgcatg cgcatggcct gagctatgaa aaaagcagcg aaggcaaaac
ctatgaagat 4980gatagcccgg aatggtttaa agaagataac gcggtgcagc
cgaacagcag ctatacctat 5040gtgtggcatg cgaccgaacg cagcggcccg
gaaagcccgg gcagcgcgtg ccgcgcgtgg 5100gcgtattata gcgcggtgaa
cccggaaaaa gatattcata gcggcctgat tggcccgctg 5160ctgatttgcc
agaaaggcat tctgcataaa gatagcaaca tgccgatgga tatgcgcgaa
5220tttgtgctgc tgtttatgac ctttgatgaa aaaaaaagct ggtattatga
aaaaaaaagc 5280cgcagcagct ggcgcctgac cagcagcgaa atgaaaaaaa
gccatgaatt tcatgcgatt 5340aacggcatga tttatagcct gccgggcctg
aaaatgtatg aacaggaatg ggtgcgcctg 5400catctgctga acattggcgg
cagccaggat attcatgtgg tgcattttca tggccagacc 5460ctgctggaaa
acggcaacaa acagcatcag ctgggcgtgt ggccgctgct gccgggcagc
5520tttaaaaccc tggaaatgaa agcgagcaaa ccgggctggt ggctgctgaa
caccgaagtg 5580ggcgaaaacc agcgcgcggg catgcagacc ccgtttctga
ttatggatcg cgattgccgc 5640atgccgatgg gcctgagcac cggcattatt
agcgatagcc agattaaagc gagcgaattt 5700ctgggctatt gggaaccgcg
cctggcgcgc ctgaacaacg gcggcagcta taacgcgtgg 5760agcgtggaaa
aactggcggc ggaatttgcg agcaaaccgt ggattcaggt ggatatgcag
5820aaagaagtga ttattaccgg cattcagacc cagggcgcga aacattatct
gaaaagctgc 5880tataccaccg aattttatgt ggcgtatagc agcaaccaga
ttaactggca gatttttaaa 5940ggcaacagca cccgcaacgt gatgtatttt
aacggcaaca gcgatgcgag caccattaaa 6000gaaaaccagt ttgatccgcc
gattgtggcg cgctatattc gcattagccc gacccgcgcg 6060tataaccgcc
cgaccctgcg cctggaactg cagggctgcg aagtgaacgg ctgcagcacc
6120ccgctgggca tggaaaacgg caaaattgaa aacaaacaga ttaccgcgag
cagctttaaa 6180aaaagctggt ggggcgatta ttgggaaccg tttcgcgcgc
gcctgaacgc gcagggccgc 6240gtgaacgcgt ggcaggcgaa agcgaacaac
aacaaacagt ggctggaaat tgatctgctg 6300aaaattaaaa aaattaccgc
gattattacc cagggctgca aaagcctgag cagcgaaatg 6360tatgtgaaaa
gctataccat tcattatagc gaacagggcg tggaatggaa accgtatcgc
6420ctgaaaagca gcatggtgga taaaattttt gaaggcaaca ccaacaccaa
aggccatgtg 6480aaaaactttt ttaacccgcc gattattagc cgctttattc
gcgtgattcc gaaaacctgg 6540aaccagagca ttgcgctgcg cctggaactg
tttggctgcg atatttat 65881552196PRTHomo sapiens 155Ala Gln Leu Arg
Gln Phe Tyr Val Ala Ala Gln Gly Ile Ser Trp Ser 1 5 10 15 Tyr Arg
Pro Glu Pro Thr Asn Ser Ser Leu Asn Leu Ser Val Thr Ser 20 25 30
Phe Lys Lys Ile Val Tyr Arg Glu Tyr Glu Pro Tyr Phe Lys Lys Glu 35
40 45 Lys Pro Gln Ser Thr Ile Ser Gly Leu Leu Gly Pro Thr Leu Tyr
Ala 50 55 60 Glu Val Gly Asp Ile Ile Lys Val His Phe Lys Asn Lys
Ala Asp Lys 65 70 75 80 Pro Leu Ser Ile His Pro Gln Gly Ile Arg Tyr
Ser Lys Leu Ser Glu 85 90 95 Gly Ala Ser Tyr Leu Asp His Thr Phe
Pro Ala Glu Lys Met Asp Asp 100 105 110 Ala Val Ala Pro Gly Arg Glu
Tyr Thr Tyr Glu Trp Ser Ile Ser Glu 115 120 125 Asp Ser Gly Pro Thr
His Asp Asp Pro Pro Cys Leu Thr His Ile Tyr 130 135 140 Tyr Ser His
Glu Asn Leu Ile Glu Asp Phe Asn Ser Gly Leu Ile Gly 145 150 155 160
Pro Leu Leu Ile Cys Lys Lys Gly Thr Leu Thr Glu Gly Gly Thr Gln 165
170 175 Lys Thr Phe Asp Lys Gln Ile Val Leu Leu Phe Ala Val Phe Asp
Glu 180 185 190 Ser Lys Ser Trp Ser Gln Ser Ser Ser Leu Met Tyr Thr
Val Asn Gly 195 200 205 Tyr Val Asn Gly Thr Met Pro Asp Ile Thr Val
Cys Ala His Asp His 210 215 220 Ile Ser Trp His Leu Leu Gly Met Ser
Ser Gly Pro Glu Leu Phe Ser 225 230 235 240 Ile His Phe Asn Gly Gln
Val Leu Glu Gln Asn His His Lys Val Ser 245 250 255 Ala Ile Thr Leu
Val Ser Ala Thr Ser Thr Thr Ala Asn Met Thr Val 260 265 270 Gly Pro
Glu Gly Lys Trp Ile Ile Ser Ser Leu Thr Pro Lys His Leu 275 280 285
Gln Ala Gly Met Gln Ala Tyr Ile Asp Ile Lys Asn Cys Pro Lys Lys 290
295 300 Thr Arg Asn Leu Lys Lys Ile Thr Arg Glu Gln Arg Arg His Met
Lys 305 310 315 320 Arg Trp Glu Tyr Phe Ile Ala Ala Glu Glu Val Ile
Trp Asp Tyr Ala 325 330 335 Pro Val Ile Pro Ala Asn Met Asp Lys Lys
Tyr Arg Ser Gln His Leu 340 345 350 Asp Asn Phe Ser Asn Gln Ile Gly
Lys His Tyr Lys Lys Val Met Tyr 355 360 365 Thr Gln Tyr Glu Asp Glu
Ser Phe Thr Lys His Thr Val Asn Pro Asn 370 375 380 Met Lys Glu Asp
Gly Ile Leu Gly Pro Ile Ile Arg Ala Gln Val Arg 385 390 395 400 Asp
Thr Leu Lys Ile Val Phe Lys Asn Met Ala Ser Arg Pro Tyr Ser 405 410
415 Ile Tyr Pro His Gly Val Thr Phe Ser Pro Tyr Glu Asp Glu Val Asn
420 425 430 Ser Ser Phe Thr Ser Gly Arg Asn Asn Thr Met Ile Arg Ala
Val Gln 435 440 445 Pro Gly Glu Thr Tyr Thr Tyr Lys Trp Asn Ile Leu
Glu Phe Asp Glu 450 455 460 Pro Thr Glu Asn Asp Ala Gln Cys Leu Thr
Arg Pro Tyr Tyr Ser Asp 465 470 475 480 Val Asp Ile Met Arg Asp Ile
Ala Ser Gly Leu Ile Gly Leu Leu Leu 485 490 495 Ile Cys Lys Ser Arg
Ser Leu Asp Arg Arg Gly Ile Gln Arg Ala Ala 500 505 510 Asp Ile Glu
Gln Gln Ala Val Phe Ala Val Phe Asp Glu Asn Lys Ser 515 520 525 Trp
Tyr Leu Glu Asp Asn Ile Asn Lys Phe Cys Glu Asn Pro Asp Glu 530 535
540 Val Lys Arg Asp Asp Pro Lys Phe Tyr Glu Ser Asn Ile Met Ser Thr
545 550 555 560 Ile Asn Gly Tyr Val Pro Glu Ser Ile Thr Thr Leu Gly
Phe Cys Phe 565 570 575 Asp Asp Thr Val Gln Trp His Phe Cys Ser Val
Gly Thr Gln Asn Glu 580 585 590 Ile Leu Thr Ile His Phe Thr Gly His
Ser Phe Ile Tyr Gly Lys Arg 595 600 605 His Glu Asp Thr Leu Thr Leu
Phe Pro Met Arg Gly Glu Ser Val Thr 610 615 620 Val Thr Met Asp Asn
Val Gly Thr Trp Met Leu Thr Ser Met Asn Ser 625 630 635 640 Ser Pro
Arg Ser Lys Lys Leu Arg Leu Lys Phe Arg Asp Val Lys Cys 645 650 655
Ile Pro Asp Asp Asp Glu Asp Ser Tyr Glu Ile Phe Glu Pro Pro Glu 660
665 670 Ser Thr Val Met Ala Thr Arg Lys Met His Asp Arg Leu Glu Pro
Glu 675 680 685 Asp Glu Glu Ser Asp Ala Asp Tyr Asp Tyr Gln Asn Arg
Leu Ala Ala 690 695 700 Ala Leu Gly Ile Arg Ser Phe Arg Asn Ser Ser
Leu Asn Gln Glu Glu 705 710 715 720 Glu Glu Phe Asn Leu Thr Ala Leu
Ala Leu Glu Asn Gly Thr Glu Phe 725 730 735 Val Ser Ser Asn Thr Asp
Ile Ile Val Gly Ser Asn Tyr Ser Ser Pro 740 745 750 Ser Asn Ile Ser
Lys Phe Thr Val Asn Asn Leu Ala Glu Pro Gln Lys 755 760 765 Ala Pro
Ser His Gln Gln Ala Thr Thr Ala Gly Ser Pro Leu Arg His 770 775 780
Leu Ile Gly Lys Asn Ser Val Leu Asn Ser Ser Thr Ala Glu His Ser 785
790 795 800 Ser Pro Tyr Ser Glu Asp Pro Ile Glu Asp Pro Leu Gln Pro
Asp Val 805 810 815 Thr Gly Ile Arg Leu Leu Ser Leu Gly Ala Gly Glu
Phe Lys Ser Gln 820 825 830 Glu His Ala Lys His Lys Gly Pro Lys Val
Glu Arg Asp Gln Ala Ala 835 840 845 Lys His Arg Phe Ser Trp Met Lys
Leu Leu Ala His Lys Val Gly Arg 850 855 860 His Leu Ser Gln Asp Thr
Gly Ser Pro Ser Gly Met Arg Pro Trp Glu 865 870 875 880 Asp Leu Pro
Ser Gln Asp Thr Gly Ser Pro Ser Arg Met Arg Pro Trp 885 890 895 Lys
Asp Pro Pro Ser Asp Leu Leu Leu Leu Lys Gln Ser Asn Ser Ser 900 905
910 Lys Ile Leu Val Gly Arg Trp His Leu Ala Ser Glu Lys Gly Ser Tyr
915 920 925 Glu Ile Ile Gln Asp Thr Asp Glu Asp Thr Ala Val Asn Asn
Trp Leu 930 935 940 Ile Ser Pro Gln Asn Ala Ser Arg Ala Trp Gly Glu
Ser Thr Pro Leu 945 950 955 960 Ala Asn Lys Pro Gly Lys Gln Ser Gly
His Pro Lys Phe Pro Arg Val 965 970 975 Arg His Lys Ser Leu Gln Val
Arg Gln Asp Gly Gly Lys Ser Arg Leu 980 985 990 Lys Lys Ser Gln Phe
Leu Ile Lys Thr Arg Lys Lys Lys Lys Glu Lys 995 1000 1005 His Thr
His His Ala Pro Leu Ser Pro Arg Thr Phe His Pro Leu 1010 1015 1020
Arg Ser Glu Ala Tyr Asn Thr Phe Ser Glu Arg Arg Leu Lys His 1025
1030 1035 Ser Leu Val Leu His Lys Ser Asn Glu Thr Ser Leu Pro Thr
Asp 1040 1045 1050 Leu Asn Gln Thr Leu Pro Ser Met Asp Phe Gly Trp
Ile Ala Ser 1055 1060 1065 Leu Pro Asp His Asn Gln Asn Ser Ser Asn
Asp Thr Gly Gln Ala 1070 1075 1080 Ser Cys Pro Pro Gly Leu Tyr Gln
Thr Val Pro Pro Glu Glu His 1085 1090 1095 Tyr Gln Thr Phe Pro Ile
Gln Asp Pro Asp Gln Met His Ser Thr 1100 1105 1110 Ser Asp Pro Ser
His Arg Ser Ser Ser Pro Glu Leu Ser Glu Met 1115 1120 1125 Leu Glu
Tyr Asp Arg Ser His Lys Ser Phe Pro Thr Asp Ile Ser 1130 1135 1140
Gln Met Ser Pro Ser Ser Glu His Glu Val Trp Gln Thr Val Ile 1145
1150 1155 Ser Pro Asp Leu Ser Gln Val Thr Leu Ser Pro Glu Leu Ser
Gln 1160 1165 1170 Thr Asn Leu Ser Pro Asp Leu Ser His Thr Thr Leu
Ser Pro Glu 1175 1180 1185 Leu Ile Gln Arg Asn Leu Ser Pro Ala Leu
Gly Gln Met Pro Ile 1190 1195 1200 Ser Pro Asp Leu Ser His Thr Thr
Leu Ser Pro Asp Leu Ser His 1205 1210 1215 Thr Thr Leu Ser Leu Asp
Leu Ser Gln Thr Asn Leu Ser Pro Glu 1220 1225 1230 Leu Ser Gln Thr
Asn Leu Ser Pro Ala Leu Gly Gln Met Pro Leu 1235 1240 1245 Ser Pro
Asp Leu Ser His Thr Thr Leu Ser Leu Asp Phe Ser Gln 1250 1255 1260
Thr Asn Leu Ser Pro Glu Leu Ser His Met Thr Leu Ser Pro Glu 1265
1270 1275 Leu Ser Gln Thr Asn Leu Ser Pro Ala Leu Gly Gln Met Pro
Ile 1280 1285 1290 Ser Pro Asp Leu Ser His Thr Thr Leu Ser Leu Asp
Phe Ser Gln 1295 1300 1305 Thr Asn Leu Ser Pro Glu Leu Ser Gln Thr
Asn Leu Ser Pro Ala 1310 1315 1320 Leu Gly Gln Met Pro Leu Ser Pro
Asp Pro Ser His Thr Thr Leu 1325 1330 1335 Ser Leu Asp Leu Ser Gln
Thr Asn Leu Ser Pro Glu Leu Ser Gln 1340 1345 1350 Thr Asn Leu Ser
Pro Asp Leu Ser Glu Met Pro Leu Phe Ala Asp 1355 1360 1365 Leu Ser
Gln Ile Pro Leu Thr Pro Asp Leu Asp Gln Met Thr Leu 1370 1375 1380
Ser Pro Asp Leu Gly Glu Thr Asp Leu Ser Pro Asn Phe Gly Gln 1385
1390 1395 Met Ser Leu Ser Pro Asp Leu Ser Gln Val Thr Leu Ser Pro
Asp 1400 1405 1410 Ile Ser Asp Thr Thr Leu Leu Pro Asp Leu Ser Gln
Ile Ser Pro 1415 1420 1425 Pro Pro Asp Leu Asp Gln Ile Phe Tyr Pro
Ser Glu Ser Ser Gln 1430 1435 1440 Ser Leu Leu Leu Gln Glu Phe Asn
Glu Ser Phe Pro Tyr Pro Asp 1445 1450 1455 Leu Gly Gln Met Pro Ser
Pro Ser Ser Pro Thr Leu Asn Asp Thr 1460 1465 1470 Phe Leu Ser Lys
Glu Phe Asn Pro Leu Val Ile Val Gly Leu Ser 1475 1480 1485 Lys Asp
Gly Thr Asp Tyr Ile Glu Ile Ile Pro Lys Glu Glu Val 1490 1495 1500
Gln Ser Ser Glu Asp Asp Tyr Ala Glu Ile Asp Tyr Val Pro Tyr 1505
1510 1515 Asp Asp Pro Tyr Lys Thr Asp Val Arg Thr Asn Ile Asn Ser
Ser 1520 1525
1530 Arg Asp Pro Asp Asn Ile Ala Ala Trp Tyr Leu Arg Ser Asn Asn
1535 1540 1545 Gly Asn Arg Arg Asn Tyr Tyr Ile Ala Ala Glu Glu Ile
Ser Trp 1550 1555 1560 Asp Tyr Ser Glu Phe Val Gln Arg Glu Thr Asp
Ile Glu Asp Ser 1565 1570 1575 Asp Asp Ile Pro Glu Asp Thr Thr Tyr
Lys Lys Val Val Phe Arg 1580 1585 1590 Lys Tyr Leu Asp Ser Thr Phe
Thr Lys Arg Asp Pro Arg Gly Glu 1595 1600 1605 Tyr Glu Glu His Leu
Gly Ile Leu Gly Pro Ile Ile Arg Ala Glu 1610 1615 1620 Val Asp Asp
Val Ile Gln Val Arg Phe Lys Asn Leu Ala Ser Arg 1625 1630 1635 Pro
Tyr Ser Leu His Ala His Gly Leu Ser Tyr Glu Lys Ser Ser 1640 1645
1650 Glu Gly Lys Thr Tyr Glu Asp Asp Ser Pro Glu Trp Phe Lys Glu
1655 1660 1665 Asp Asn Ala Val Gln Pro Asn Ser Ser Tyr Thr Tyr Val
Trp His 1670 1675 1680 Ala Thr Glu Arg Ser Gly Pro Glu Ser Pro Gly
Ser Ala Cys Arg 1685 1690 1695 Ala Trp Ala Tyr Tyr Ser Ala Val Asn
Pro Glu Lys Asp Ile His 1700 1705 1710 Ser Gly Leu Ile Gly Pro Leu
Leu Ile Cys Gln Lys Gly Ile Leu 1715 1720 1725 His Lys Asp Ser Asn
Met Pro Met Asp Met Arg Glu Phe Val Leu 1730 1735 1740 Leu Phe Met
Thr Phe Asp Glu Lys Lys Ser Trp Tyr Tyr Glu Lys 1745 1750 1755 Lys
Ser Arg Ser Ser Trp Arg Leu Thr Ser Ser Glu Met Lys Lys 1760 1765
1770 Ser His Glu Phe His Ala Ile Asn Gly Met Ile Tyr Ser Leu Pro
1775 1780 1785 Gly Leu Lys Met Tyr Glu Gln Glu Trp Val Arg Leu His
Leu Leu 1790 1795 1800 Asn Ile Gly Gly Ser Gln Asp Ile His Val Val
His Phe His Gly 1805 1810 1815 Gln Thr Leu Leu Glu Asn Gly Asn Lys
Gln His Gln Leu Gly Val 1820 1825 1830 Trp Pro Leu Leu Pro Gly Ser
Phe Lys Thr Leu Glu Met Lys Ala 1835 1840 1845 Ser Lys Pro Gly Trp
Trp Leu Leu Asn Thr Glu Val Gly Glu Asn 1850 1855 1860 Gln Arg Ala
Gly Met Gln Thr Pro Phe Leu Ile Met Asp Arg Asp 1865 1870 1875 Cys
Arg Met Pro Met Gly Leu Ser Thr Gly Ile Ile Ser Asp Ser 1880 1885
1890 Gln Ile Lys Ala Ser Glu Phe Leu Gly Tyr Trp Glu Pro Arg Leu
1895 1900 1905 Ala Arg Leu Asn Asn Gly Gly Ser Tyr Asn Ala Trp Ser
Val Glu 1910 1915 1920 Lys Leu Ala Ala Glu Phe Ala Ser Lys Pro Trp
Ile Gln Val Asp 1925 1930 1935 Met Gln Lys Glu Val Ile Ile Thr Gly
Ile Gln Thr Gln Gly Ala 1940 1945 1950 Lys His Tyr Leu Lys Ser Cys
Tyr Thr Thr Glu Phe Tyr Val Ala 1955 1960 1965 Tyr Ser Ser Asn Gln
Ile Asn Trp Gln Ile Phe Lys Gly Asn Ser 1970 1975 1980 Thr Arg Asn
Val Met Tyr Phe Asn Gly Asn Ser Asp Ala Ser Thr 1985 1990 1995 Ile
Lys Glu Asn Gln Phe Asp Pro Pro Ile Val Ala Arg Tyr Ile 2000 2005
2010 Arg Ile Ser Pro Thr Arg Ala Tyr Asn Arg Pro Thr Leu Arg Leu
2015 2020 2025 Glu Leu Gln Gly Cys Glu Val Asn Gly Cys Ser Thr Pro
Leu Gly 2030 2035 2040 Met Glu Asn Gly Lys Ile Glu Asn Lys Gln Ile
Thr Ala Ser Ser 2045 2050 2055 Phe Lys Lys Ser Trp Trp Gly Asp Tyr
Trp Glu Pro Phe Arg Ala 2060 2065 2070 Arg Leu Asn Ala Gln Gly Arg
Val Asn Ala Trp Gln Ala Lys Ala 2075 2080 2085 Asn Asn Asn Lys Gln
Trp Leu Glu Ile Asp Leu Leu Lys Ile Lys 2090 2095 2100 Lys Ile Thr
Ala Ile Ile Thr Gln Gly Cys Lys Ser Leu Ser Ser 2105 2110 2115 Glu
Met Tyr Val Lys Ser Tyr Thr Ile His Tyr Ser Glu Gln Gly 2120 2125
2130 Val Glu Trp Lys Pro Tyr Arg Leu Lys Ser Ser Met Val Asp Lys
2135 2140 2145 Ile Phe Glu Gly Asn Thr Asn Thr Lys Gly His Val Lys
Asn Phe 2150 2155 2160 Phe Asn Pro Pro Ile Ile Ser Arg Phe Ile Arg
Val Ile Pro Lys 2165 2170 2175 Thr Trp Asn Gln Ser Ile Ala Leu Arg
Leu Glu Leu Phe Gly Cys 2180 2185 2190 Asp Ile Tyr 2195
1561218DNAHomo sapiens 156 gcgaacgcgt ttctggaaga actgcgcccg
ggcagcctgg aacgcgaatg caaagaagaa 60cagtgcagct ttgaagaagc gcgcgaaatt
tttaaagatg cggaacgcac caaactgttt 120tggattagct atagcgatgg
cgatcagtgc gcgagcagcc cgtgccagaa cggcggcagc 180tgcaaagatc
agctgcagag ctatatttgc ttttgcctgc cggcgtttga aggccgcaac
240tgcgaaaccc ataaagatga tcagctgatt tgcgtgaacg aaaacggcgg
ctgcgaacag 300tattgcagcg atcataccgg caccaaacgc agctgccgct
gccatgaagg ctatagcctg 360ctggcggatg gcgtgagctg caccccgacc
gtggaatatc cgtgcggcaa aattccgatt 420ctggaaaaac gcaacgcgag
caaaccgcag ggccgcattg tgggcggcaa agtgtgcccg 480aaaggcgaat
gcccgtggca ggtgctgctg ctggtgaacg gcgcgcagct gtgcggcggc
540accctgatta acaccatttg ggtggtgagc gcggcgcatt gctttgataa
aattaaaaac 600tggcgcaacc tgattgcggt gctgggcgaa catgatctga
gcgaacatga tggcgatgaa 660cagagccgcc gcgtggcgca ggtgattatt
ccgagcacct atgtgccggg caccaccaac 720catgatattg cgctgctgcg
cctgcatcag ccggtggtgc tgaccgatca tgtggtgccg 780ctgtgcctgc
cggaacgcac ctttagcgaa cgcaccctgg cgtttgtgcg ctttagcctg
840gtgagcggct ggggccagct gctggatcgc ggcgcgaccg cgctggaact
gatggtgctg 900aacgtgccgc gcctgatgac ccaggattgc ctgcagcaga
gccgcaaagt gggcgatagc 960ccgaacatta ccgaatatat gttttgcgcg
ggctatagcg atggcagcaa agatagctgc 1020aaaggcgata gcggcggccc
gcatgcgacc cattatcgcg gcacctggta tctgaccggc 1080attgtgagct
ggggccaggg ctgcgcgacc gtgggccatt ttggcgtgta tacccgcgtg
1140agccagtata ttgaatggct gcagaaactg atgcgcagcg aaccgcgccc
gggcgtgctg 1200ctgcgcgcgc cgtttccg 1218157406PRTHomo sapiens 157Ala
Asn Ala Phe Leu Glu Glu Leu Arg Pro Gly Ser Leu Glu Arg Glu 1 5 10
15 Cys Lys Glu Glu Gln Cys Ser Phe Glu Glu Ala Arg Glu Ile Phe Lys
20 25 30 Asp Ala Glu Arg Thr Lys Leu Phe Trp Ile Ser Tyr Ser Asp
Gly Asp 35 40 45 Gln Cys Ala Ser Ser Pro Cys Gln Asn Gly Gly Ser
Cys Lys Asp Gln 50 55 60 Leu Gln Ser Tyr Ile Cys Phe Cys Leu Pro
Ala Phe Glu Gly Arg Asn 65 70 75 80 Cys Glu Thr His Lys Asp Asp Gln
Leu Ile Cys Val Asn Glu Asn Gly 85 90 95 Gly Cys Glu Gln Tyr Cys
Ser Asp His Thr Gly Thr Lys Arg Ser Cys 100 105 110 Arg Cys His Glu
Gly Tyr Ser Leu Leu Ala Asp Gly Val Ser Cys Thr 115 120 125 Pro Thr
Val Glu Tyr Pro Cys Gly Lys Ile Pro Ile Leu Glu Lys Arg 130 135 140
Asn Ala Ser Lys Pro Gln Gly Arg Ile Val Gly Gly Lys Val Cys Pro 145
150 155 160 Lys Gly Glu Cys Pro Trp Gln Val Leu Leu Leu Val Asn Gly
Ala Gln 165 170 175 Leu Cys Gly Gly Thr Leu Ile Asn Thr Ile Trp Val
Val Ser Ala Ala 180 185 190 His Cys Phe Asp Lys Ile Lys Asn Trp Arg
Asn Leu Ile Ala Val Leu 195 200 205 Gly Glu His Asp Leu Ser Glu His
Asp Gly Asp Glu Gln Ser Arg Arg 210 215 220 Val Ala Gln Val Ile Ile
Pro Ser Thr Tyr Val Pro Gly Thr Thr Asn 225 230 235 240 His Asp Ile
Ala Leu Leu Arg Leu His Gln Pro Val Val Leu Thr Asp 245 250 255 His
Val Val Pro Leu Cys Leu Pro Glu Arg Thr Phe Ser Glu Arg Thr 260 265
270 Leu Ala Phe Val Arg Phe Ser Leu Val Ser Gly Trp Gly Gln Leu Leu
275 280 285 Asp Arg Gly Ala Thr Ala Leu Glu Leu Met Val Leu Asn Val
Pro Arg 290 295 300 Leu Met Thr Gln Asp Cys Leu Gln Gln Ser Arg Lys
Val Gly Asp Ser 305 310 315 320 Pro Asn Ile Thr Glu Tyr Met Phe Cys
Ala Gly Tyr Ser Asp Gly Ser 325 330 335 Lys Asp Ser Cys Lys Gly Asp
Ser Gly Gly Pro His Ala Thr His Tyr 340 345 350 Arg Gly Thr Trp Tyr
Leu Thr Gly Ile Val Ser Trp Gly Gln Gly Cys 355 360 365 Ala Thr Val
Gly His Phe Gly Val Tyr Thr Arg Val Ser Gln Tyr Ile 370 375 380 Glu
Trp Leu Gln Lys Leu Met Arg Ser Glu Pro Arg Pro Gly Val Leu 385 390
395 400 Leu Arg Ala Pro Phe Pro 405 1586996DNAHomo sapiens
158gcgacccgcc gctattatct gggcgcggtg gaactgagct gggattatat
gcagagcgat 60ctgggcgaac tgccggtgga tgcgcgcttt ccgccgcgcg tgccgaaaag
ctttccgttt 120aacaccagcg tggtgtataa aaaaaccctg tttgtggaat
ttaccgatca tctgtttaac 180attgcgaaac cgcgcccgcc gtggatgggc
ctgctgggcc cgaccattca ggcggaagtg 240tatgataccg tggtgattac
cctgaaaaac atggcgagcc atccggtgag cctgcatgcg 300gtgggcgtga
gctattggaa agcgagcgaa ggcgcggaat atgatgatca gaccagccag
360cgcgaaaaag aagatgataa agtgtttccg ggcggcagcc atacctatgt
gtggcaggtg 420ctgaaagaaa acggcccgat ggcgagcgat ccgctgtgcc
tgacctatag ctatctgagc 480catgtggatc tggtgaaaga tctgaacagc
ggcctgattg gcgcgctgct ggtgtgccgc 540gaaggcagcc tggcgaaaga
aaaaacccag accctgcata aatttattct gctgtttgcg 600gtgtttgatg
aaggcaaaag ctggcatagc gaaaccaaaa acagcctgat gcaggatcgc
660gatgcggcga gcgcgcgcgc gtggccgaaa atgcataccg tgaacggcta
tgtgaaccgc 720agcctgccgg gcctgattgg ctgccatcgc aaaagcgtgt
attggcatgt gattggcatg 780ggcaccaccc cggaagtgca tagcattttt
ctggaaggcc atacctttct ggtgcgcaac 840catcgccagg cgagcctgga
aattagcccg attacctttc tgaccgcgca gaccctgctg 900atggatctgg
gccagtttct gctgttttgc catattagca gccatcagca tgatggcatg
960gaagcgtatg tgaaagtgga tagctgcccg gaagaaccgc agctgcgcat
gaaaaacaac 1020gaagaagcgg aagattatga tgatgatctg accgatagcg
aaatggatgt ggtgcgcttt 1080gatgatgata acagcccgag ctttattcag
attcgcagcg tggcgaaaaa acatccgaaa 1140acctgggtgc attatattgc
ggcggaagaa gaagattggg attatgcgcc gctggtgctg 1200gcgccggatg
atcgcagcta taaaagccag tatctgaaca acggcccgca gcgcattggc
1260cgcaaatata aaaaagtgcg ctttatggcg tataccgatg aaacctttaa
aacccgcgaa 1320gcgattcagc atgaaagcgg cattctgggc ccgctgctgt
atggcgaagt gggcgatacc 1380ctgctgatta tttttaaaaa ccaggcgagc
cgcccgtata acatttatcc gcatggcatt 1440accgatgtgc gcccgctgta
tagccgccgc ctgccgaaag gcgtgaaaca tctgaaagat 1500tttccgattc
tgccgggcga aatttttaaa tataaatgga ccgtgaccgt ggaagatggc
1560ccgaccaaaa gcgatccgcg ctgcctgacc cgctattata gcagctttgt
gaacatggaa 1620cgcgatctgg cgagcggcct gattggcccg ctgctgattt
gctataaaga aagcgtggat 1680cagcgcggca accagattat gagcgataaa
cgcaacgtga ttctgtttag cgtgtttgat 1740gaaaaccgca gctggtatct
gaccgaaaac attcagcgct ttctgccgaa cccggcgggc 1800gtgcagctgg
aagatccgga atttcaggcg agcaacatta tgcatagcat taacggctat
1860gtgtttgata gcctgcagct gagcgtgtgc ctgcatgaag tggcgtattg
gtatattctg 1920agcattggcg cgcagaccga ttttctgagc gtgtttttta
gcggctatac ctttaaacat 1980aaaatggtgt atgaagatac cctgaccctg
tttccgttta gcggcgaaac cgtgtttatg 2040agcatggaaa acccgggcct
gtggattctg ggctgccata acagcgattt tcgcaaccgc 2100ggcatgaccg
cgctgctgaa agtgagcagc tgcgataaaa acaccggcga ttattatgaa
2160gatagctatg aagatattag cgcgtatctg ctgagcaaaa acaacgcgat
tgaaccgcgc 2220agctttagcc agaacagccg ccatccgagc acccgccaga
aacagtttaa cgcgaccacc 2280attccggaaa acgatattga aaaaaccgat
ccgtggtttg cgcatcgcac cccgatgccg 2340aaaattcaga acgtgagcag
cagcgatctg ctgatgctgc tgcgccagag cccgaccccg 2400catggcctga
gcctgagcga tctgcaggaa gcgaaatatg aaacctttag cgatgatccg
2460agcccgggcg cgattgatag caacaacagc ctgagcgaaa tgacccattt
tcgcccgcag 2520ctgcatcata gcggcgatat ggtgtttacc ccggaaagcg
gcctgcagct gcgcctgaac 2580gaaaaactgg gcaccaccgc ggcgaccgaa
ctgaaaaaac tggattttaa agtgagcagc 2640accagcaaca acctgattag
caccattccg agcgataacc tggcggcggg caccgataac 2700accagcagcc
tgggcccgcc gagcatgccg gtgcattatg atagccagct ggataccacc
2760ctgtttggca aaaaaagcag cccgctgacc gaaagcggcg gcccgctgag
cctgagcgaa 2820gaaaacaacg atagcaaact gctggaaagc ggcctgatga
acagccagga aagcagctgg 2880ggcaaaaacg tgagcagcac cgaaagcggc
cgcctgttta aaggcaaacg cgcgcatggc 2940ccggcgctgc tgaccaaaga
taacgcgctg tttaaagtga gcattagcct gctgaaaacc 3000aacaaaacca
gcaacaacag cgcgaccaac cgcaaaaccc atattgatgg cccgagcctg
3060ctgattgaaa acagcccgag cgtgtggcag aacattctgg aaagcgatac
cgaatttaaa 3120aaagtgaccc cgctgattca tgatcgcatg ctgatggata
aaaacgcgac cgcgctgcgc 3180ctgaaccata tgagcaacaa aaccaccagc
agcaaaaaca tggaaatggt gcagcagaaa 3240aaagaaggcc cgattccgcc
ggatgcgcag aacccggata tgagcttttt taaaatgctg 3300tttctgccgg
aaagcgcgcg ctggattcag cgcacccatg gcaaaaacag cctgaacagc
3360ggccagggcc cgagcccgaa acagctggtg agcctgggcc cggaaaaaag
cgtggaaggc 3420cagaactttc tgagcgaaaa aaacaaagtg gtggtgggca
aaggcgaatt taccaaagat 3480gtgggcctga aagaaatggt gtttccgagc
agccgcaacc tgtttctgac caacctggat 3540aacctgcatg aaaacaacac
ccataaccag gaaaaaaaaa ttcaggaaga aattgaaaaa 3600aaagaaaccc
tgattcagga aaacgtggtg ctgccgcaga ttcataccgt gaccggcacc
3660aaaaacttta tgaaaaacct gtttctgctg agcacccgcc agaacgtgga
aggcagctat 3720gatggcgcgt atgcgccggt gctgcaggat tttcgcagcc
tgaacgatag caccaaccgc 3780accaaaaaac ataccgcgca ttttagcaaa
aaaggcgaag aagaaaacct ggaaggcctg 3840ggcaaccaga ccaaacagat
tgtggaaaaa tatgcgtgca ccacccgcat tagcccgaac 3900accagccagc
agaactttgt gacccagcgc agcaaacgcg cgctgaaaca gtttcgcctg
3960ccgctggaag aaaccgaact ggaaaaacgc attattgtgg atgataccag
cacccagtgg 4020agcaaaaaca tgaaacatct gaccccgagc accctgaccc
agattgatta taacgaaaaa 4080gaaaaaggcg cgattaccca gagcccgctg
agcgattgcc tgacccgcag ccatagcatt 4140ccgcaggcga accgcagccc
gctgccgatt gcgaaagtga gcagctttcc gagcattcgc 4200ccgatttatc
tgacccgcgt gctgtttcag gataacagca gccatctgcc ggcggcgagc
4260tatcgcaaaa aagatagcgg cgtgcaggaa agcagccatt ttctgcaggg
cgcgaaaaaa 4320aacaacctga gcctggcgat tctgaccctg gaaatgaccg
gcgatcagcg cgaagtgggc 4380agcctgggca ccagcgcgac caacagcgtg
acctataaaa aagtggaaaa caccgtgctg 4440ccgaaaccgg atctgccgaa
aaccagcggc aaagtggaac tgctgccgaa agtgcatatt 4500tatcagaaag
atctgtttcc gaccgaaacc agcaacggca gcccgggcca tctggatctg
4560gtggaaggca gcctgctgca gggcaccgaa ggcgcgatta aatggaacga
agcgaaccgc 4620ccgggcaaag tgccgtttct gcgcgtggcg accgaaagca
gcgcgaaaac cccgagcaaa 4680ctgctggatc cgctggcgtg ggataaccat
tatggcaccc agattccgaa agaagaatgg 4740aaaagccagg aaaaaagccc
ggaaaaaacc gcgtttaaaa aaaaagatac cattctgagc 4800ctgaacgcgt
gcgaaagcaa ccatgcgatt gcggcgatta acgaaggcca gaacaaaccg
4860gaaattgaag tgacctgggc gaaacagggc cgcaccgaac gcctgtgcag
ccagaacccg 4920ccggtgctga aacgccatca gcgcgaaatt acccgcacca
ccctgcagag cgatcaggaa 4980gaaattgatt atgatgatac cattagcgtg
gaaatgaaaa aagaagattt tgatatttat 5040gatgaagatg aaaaccagag
cccgcgcagc tttcagaaaa aaacccgcca ttattttatt 5100gcggcggtgg
aacgcctgtg ggattatggc atgagcagca gcccgcatgt gctgcgcaac
5160cgcgcgcaga gcggcagcgt gccgcagttt aaaaaagtgg tgtttcagga
atttaccgat 5220ggcagcttta cccagccgct gtatcgcggc gaactgaacg
aacatctggg cctgctgggc 5280ccgtatattc gcgcggaagt ggaagataac
attatggtga cctttcgcaa ccaggcgagc 5340cgcccgtata gcttttatag
cagcctgatt agctatgaag aagatcagcg ccagggcgcg 5400gaaccgcgca
aaaactttgt gaaaccgaac gaaaccaaaa cctatttttg gaaagtgcag
5460catcatatgg cgccgaccaa agatgaattt gattgcaaag cgtgggcgta
ttttagcgat 5520gtggatctgg aaaaagatgt gcatagcggc ctgattggcc
cgctgctggt gtgccatacc 5580aacaccctga acccggcgca tggccgccag
gtgaccgtgc aggaatttgc gctgtttttt 5640accatttttg atgaaaccaa
aagctggtat tttaccgaaa acatggaacg caactgccgc 5700gcgccgtgca
acattcagat ggaagatccg acctttaaag aaaactatcg ctttcatgcg
5760attaacggct atattatgga taccctgccg ggcctggtga tggcgcagga
tcagcgcatt 5820cgctggtatc tgctgagcat gggcagcaac gaaaacattc
atagcattca ttttagcggc 5880catgtgttta ccgtgcgcaa aaaagaagaa
tataaaatgg cgctgtataa cctgtatccg 5940ggcgtgtttg aaaccgtgga
aatgctgccg agcaaagcgg gcatttggcg cgtggaatgc 6000ctgattggcg
aacatctgca tgcgggcatg agcaccctgt ttctggtgta tagcaacaaa
6060tgccagaccc cgctgggcat ggcgagcggc catattcgcg attttcagat
taccgcgagc 6120ggccagtatg gccagtgggc gccgaaactg gcgcgcctgc
attatagcgg cagcattaac 6180gcgtggagca ccaaagaacc gtttagctgg
attaaagtgg atctgctggc gccgatgatt 6240attcatggca ttaaaaccca
gggcgcgcgc cagaaattta gcagcctgta tattagccag 6300tttattatta
tgtatagcct ggatggcaaa aaatggcaga cctatcgcgg caacagcacc
6360ggcaccctga tggtgttttt tggcaacgtg gatagcagcg gcattaaaca
taacattttt 6420aacccgccga ttattgcgcg ctatattcgc ctgcatccga
cccattatag cattcgcagc 6480accctgcgca tggaactgat gggctgcgat
ctgaacagct gcagcatgcc gctgggcatg 6540gaaagcaaag cgattagcga
tgcgcagatt accgcgagca gctattttac caacatgttt 6600gcgacctgga
gcccgagcaa agcgcgcctg catctgcagg gccgcagcaa cgcgtggcgc
6660ccgcaggtga acaacccgaa agaatggctg caggtggatt ttcagaaaac
catgaaagtg 6720accggcgtga ccacccaggg cgtgaaaagc ctgctgacca
gcatgtatgt gaaagaattt 6780ctgattagca gcagccagga tggccatcag
tggaccctgt tttttcagaa cggcaaagtg 6840aaagtgtttc agggcaacca
ggatagcttt accccggtgg tgaacagcct ggatccgccg 6900ctgctgaccc
gctatctgcg cattcatccg cagagctggg tgcatcagat tgcgctgcgc
6960atggaagtgc tgggctgcga agcgcaggat ctgtat 69961592332PRTHomo
sapiens 159Ala Thr Arg Arg Tyr Tyr Leu Gly Ala Val Glu Leu Ser Trp
Asp Tyr 1 5 10 15 Met Gln Ser Asp Leu Gly Glu Leu Pro Val Asp Ala
Arg Phe Pro Pro 20 25 30 Arg Val Pro Lys Ser Phe Pro Phe Asn Thr
Ser Val Val Tyr Lys Lys 35 40 45 Thr Leu Phe Val Glu Phe Thr Asp
His Leu Phe Asn Ile Ala Lys Pro 50 55 60 Arg Pro Pro Trp Met Gly
Leu Leu Gly Pro Thr Ile Gln Ala Glu Val 65 70 75 80 Tyr Asp Thr Val
Val Ile Thr Leu Lys Asn Met Ala Ser His Pro Val 85 90 95 Ser Leu
His Ala Val Gly Val Ser Tyr Trp Lys Ala Ser Glu Gly Ala 100 105 110
Glu Tyr Asp Asp Gln Thr Ser Gln Arg Glu Lys Glu Asp Asp Lys Val 115
120 125 Phe Pro Gly Gly Ser His Thr Tyr Val Trp Gln Val Leu Lys Glu
Asn 130 135 140 Gly Pro Met Ala Ser Asp Pro Leu Cys Leu Thr Tyr Ser
Tyr Leu Ser 145 150 155 160 His Val Asp Leu Val Lys Asp Leu Asn Ser
Gly Leu Ile Gly Ala Leu 165 170 175 Leu Val Cys Arg Glu Gly Ser Leu
Ala Lys Glu Lys Thr Gln Thr Leu 180 185 190 His Lys Phe Ile Leu Leu
Phe Ala Val Phe Asp Glu Gly Lys Ser Trp 195 200 205 His Ser Glu Thr
Lys Asn Ser Leu Met Gln Asp Arg Asp Ala Ala Ser 210 215 220 Ala Arg
Ala Trp Pro Lys Met His Thr Val Asn Gly Tyr Val Asn Arg 225 230 235
240 Ser Leu Pro Gly Leu Ile Gly Cys His Arg Lys Ser Val Tyr Trp His
245 250 255 Val Ile Gly Met Gly Thr Thr Pro Glu Val His Ser Ile Phe
Leu Glu 260 265 270 Gly His Thr Phe Leu Val Arg Asn His Arg Gln Ala
Ser Leu Glu Ile 275 280 285 Ser Pro Ile Thr Phe Leu Thr Ala Gln Thr
Leu Leu Met Asp Leu Gly 290 295 300 Gln Phe Leu Leu Phe Cys His Ile
Ser Ser His Gln His Asp Gly Met 305 310 315 320 Glu Ala Tyr Val Lys
Val Asp Ser Cys Pro Glu Glu Pro Gln Leu Arg 325 330 335 Met Lys Asn
Asn Glu Glu Ala Glu Asp Tyr Asp Asp Asp Leu Thr Asp 340 345 350 Ser
Glu Met Asp Val Val Arg Phe Asp Asp Asp Asn Ser Pro Ser Phe 355 360
365 Ile Gln Ile Arg Ser Val Ala Lys Lys His Pro Lys Thr Trp Val His
370 375 380 Tyr Ile Ala Ala Glu Glu Glu Asp Trp Asp Tyr Ala Pro Leu
Val Leu 385 390 395 400 Ala Pro Asp Asp Arg Ser Tyr Lys Ser Gln Tyr
Leu Asn Asn Gly Pro 405 410 415 Gln Arg Ile Gly Arg Lys Tyr Lys Lys
Val Arg Phe Met Ala Tyr Thr 420 425 430 Asp Glu Thr Phe Lys Thr Arg
Glu Ala Ile Gln His Glu Ser Gly Ile 435 440 445 Leu Gly Pro Leu Leu
Tyr Gly Glu Val Gly Asp Thr Leu Leu Ile Ile 450 455 460 Phe Lys Asn
Gln Ala Ser Arg Pro Tyr Asn Ile Tyr Pro His Gly Ile 465 470 475 480
Thr Asp Val Arg Pro Leu Tyr Ser Arg Arg Leu Pro Lys Gly Val Lys 485
490 495 His Leu Lys Asp Phe Pro Ile Leu Pro Gly Glu Ile Phe Lys Tyr
Lys 500 505 510 Trp Thr Val Thr Val Glu Asp Gly Pro Thr Lys Ser Asp
Pro Arg Cys 515 520 525 Leu Thr Arg Tyr Tyr Ser Ser Phe Val Asn Met
Glu Arg Asp Leu Ala 530 535 540 Ser Gly Leu Ile Gly Pro Leu Leu Ile
Cys Tyr Lys Glu Ser Val Asp 545 550 555 560 Gln Arg Gly Asn Gln Ile
Met Ser Asp Lys Arg Asn Val Ile Leu Phe 565 570 575 Ser Val Phe Asp
Glu Asn Arg Ser Trp Tyr Leu Thr Glu Asn Ile Gln 580 585 590 Arg Phe
Leu Pro Asn Pro Ala Gly Val Gln Leu Glu Asp Pro Glu Phe 595 600 605
Gln Ala Ser Asn Ile Met His Ser Ile Asn Gly Tyr Val Phe Asp Ser 610
615 620 Leu Gln Leu Ser Val Cys Leu His Glu Val Ala Tyr Trp Tyr Ile
Leu 625 630 635 640 Ser Ile Gly Ala Gln Thr Asp Phe Leu Ser Val Phe
Phe Ser Gly Tyr 645 650 655 Thr Phe Lys His Lys Met Val Tyr Glu Asp
Thr Leu Thr Leu Phe Pro 660 665 670 Phe Ser Gly Glu Thr Val Phe Met
Ser Met Glu Asn Pro Gly Leu Trp 675 680 685 Ile Leu Gly Cys His Asn
Ser Asp Phe Arg Asn Arg Gly Met Thr Ala 690 695 700 Leu Leu Lys Val
Ser Ser Cys Asp Lys Asn Thr Gly Asp Tyr Tyr Glu 705 710 715 720 Asp
Ser Tyr Glu Asp Ile Ser Ala Tyr Leu Leu Ser Lys Asn Asn Ala 725 730
735 Ile Glu Pro Arg Ser Phe Ser Gln Asn Ser Arg His Pro Ser Thr Arg
740 745 750 Gln Lys Gln Phe Asn Ala Thr Thr Ile Pro Glu Asn Asp Ile
Glu Lys 755 760 765 Thr Asp Pro Trp Phe Ala His Arg Thr Pro Met Pro
Lys Ile Gln Asn 770 775 780 Val Ser Ser Ser Asp Leu Leu Met Leu Leu
Arg Gln Ser Pro Thr Pro 785 790 795 800 His Gly Leu Ser Leu Ser Asp
Leu Gln Glu Ala Lys Tyr Glu Thr Phe 805 810 815 Ser Asp Asp Pro Ser
Pro Gly Ala Ile Asp Ser Asn Asn Ser Leu Ser 820 825 830 Glu Met Thr
His Phe Arg Pro Gln Leu His His Ser Gly Asp Met Val 835 840 845 Phe
Thr Pro Glu Ser Gly Leu Gln Leu Arg Leu Asn Glu Lys Leu Gly 850 855
860 Thr Thr Ala Ala Thr Glu Leu Lys Lys Leu Asp Phe Lys Val Ser Ser
865 870 875 880 Thr Ser Asn Asn Leu Ile Ser Thr Ile Pro Ser Asp Asn
Leu Ala Ala 885 890 895 Gly Thr Asp Asn Thr Ser Ser Leu Gly Pro Pro
Ser Met Pro Val His 900 905 910 Tyr Asp Ser Gln Leu Asp Thr Thr Leu
Phe Gly Lys Lys Ser Ser Pro 915 920 925 Leu Thr Glu Ser Gly Gly Pro
Leu Ser Leu Ser Glu Glu Asn Asn Asp 930 935 940 Ser Lys Leu Leu Glu
Ser Gly Leu Met Asn Ser Gln Glu Ser Ser Trp 945 950 955 960 Gly Lys
Asn Val Ser Ser Thr Glu Ser Gly Arg Leu Phe Lys Gly Lys 965 970 975
Arg Ala His Gly Pro Ala Leu Leu Thr Lys Asp Asn Ala Leu Phe Lys 980
985 990 Val Ser Ile Ser Leu Leu Lys Thr Asn Lys Thr Ser Asn Asn Ser
Ala 995 1000 1005 Thr Asn Arg Lys Thr His Ile Asp Gly Pro Ser Leu
Leu Ile Glu 1010 1015 1020 Asn Ser Pro Ser Val Trp Gln Asn Ile Leu
Glu Ser Asp Thr Glu 1025 1030 1035 Phe Lys Lys Val Thr Pro Leu Ile
His Asp Arg Met Leu Met Asp 1040 1045 1050 Lys Asn Ala Thr Ala Leu
Arg Leu Asn His Met Ser Asn Lys Thr 1055 1060 1065 Thr Ser Ser Lys
Asn Met Glu Met Val Gln Gln Lys Lys Glu Gly 1070 1075 1080 Pro Ile
Pro Pro Asp Ala Gln Asn Pro Asp Met Ser Phe Phe Lys 1085 1090 1095
Met Leu Phe Leu Pro Glu Ser Ala Arg Trp Ile Gln Arg Thr His 1100
1105 1110 Gly Lys Asn Ser Leu Asn Ser Gly Gln Gly Pro Ser Pro Lys
Gln 1115 1120 1125 Leu Val Ser Leu Gly Pro Glu Lys Ser Val Glu Gly
Gln Asn Phe 1130 1135 1140 Leu Ser Glu Lys Asn Lys Val Val Val Gly
Lys Gly Glu Phe Thr 1145 1150 1155 Lys Asp Val Gly Leu Lys Glu Met
Val Phe Pro Ser Ser Arg Asn 1160 1165 1170 Leu Phe Leu Thr Asn Leu
Asp Asn Leu His Glu Asn Asn Thr His 1175 1180 1185 Asn Gln Glu Lys
Lys Ile Gln Glu Glu Ile Glu Lys Lys Glu Thr 1190 1195 1200 Leu Ile
Gln Glu Asn Val Val Leu Pro Gln Ile His Thr Val Thr 1205 1210 1215
Gly Thr Lys Asn Phe Met Lys Asn Leu Phe Leu Leu Ser Thr Arg 1220
1225 1230 Gln Asn Val Glu Gly Ser Tyr Asp Gly Ala Tyr Ala Pro Val
Leu 1235 1240 1245 Gln Asp Phe Arg Ser Leu Asn Asp Ser Thr Asn Arg
Thr Lys Lys 1250 1255 1260 His Thr Ala His Phe Ser Lys Lys Gly Glu
Glu Glu Asn Leu Glu 1265 1270 1275 Gly Leu Gly Asn Gln Thr Lys Gln
Ile Val Glu Lys Tyr Ala Cys 1280 1285 1290 Thr Thr Arg Ile Ser Pro
Asn Thr Ser Gln Gln Asn Phe Val Thr 1295 1300 1305 Gln Arg Ser Lys
Arg Ala Leu Lys Gln Phe Arg Leu Pro Leu Glu 1310 1315 1320 Glu Thr
Glu Leu Glu Lys Arg Ile Ile Val Asp Asp Thr Ser Thr 1325 1330 1335
Gln Trp Ser Lys Asn Met Lys His Leu Thr Pro Ser Thr Leu Thr 1340
1345 1350 Gln Ile Asp Tyr Asn Glu Lys Glu Lys Gly Ala Ile Thr Gln
Ser 1355 1360 1365 Pro Leu Ser Asp Cys Leu Thr Arg Ser His Ser Ile
Pro Gln Ala 1370 1375 1380 Asn Arg Ser Pro Leu Pro Ile Ala Lys Val
Ser Ser Phe Pro Ser 1385 1390 1395 Ile Arg Pro Ile Tyr Leu Thr Arg
Val Leu Phe Gln Asp Asn Ser 1400 1405 1410 Ser His Leu Pro Ala Ala
Ser Tyr Arg Lys Lys Asp Ser Gly Val 1415 1420 1425 Gln Glu Ser Ser
His Phe Leu Gln Gly Ala Lys Lys Asn Asn Leu 1430 1435 1440 Ser Leu
Ala Ile Leu Thr Leu Glu Met Thr Gly Asp Gln Arg Glu 1445 1450 1455
Val Gly Ser Leu Gly Thr Ser Ala Thr Asn Ser Val Thr Tyr Lys 1460
1465 1470 Lys Val Glu Asn Thr Val Leu Pro Lys Pro Asp Leu Pro Lys
Thr 1475 1480 1485 Ser Gly Lys Val Glu Leu Leu Pro Lys Val His Ile
Tyr Gln Lys 1490 1495 1500 Asp Leu Phe Pro Thr Glu Thr Ser Asn Gly
Ser Pro Gly His Leu 1505 1510 1515 Asp Leu Val Glu Gly Ser Leu Leu
Gln Gly Thr Glu Gly Ala Ile 1520 1525 1530 Lys Trp Asn Glu Ala Asn
Arg Pro Gly Lys Val Pro Phe Leu Arg 1535 1540 1545 Val Ala Thr Glu
Ser Ser Ala Lys Thr Pro Ser Lys Leu Leu Asp 1550 1555 1560 Pro Leu
Ala Trp Asp Asn His Tyr Gly Thr Gln Ile Pro Lys Glu 1565 1570 1575
Glu Trp Lys Ser Gln Glu Lys Ser Pro Glu Lys Thr Ala Phe Lys 1580
1585 1590 Lys Lys Asp Thr Ile Leu Ser Leu Asn Ala Cys Glu Ser Asn
His 1595 1600 1605 Ala Ile Ala Ala Ile Asn Glu Gly Gln Asn Lys Pro
Glu Ile Glu 1610 1615 1620 Val Thr Trp Ala Lys Gln Gly Arg Thr Glu
Arg Leu Cys Ser Gln 1625 1630 1635 Asn Pro Pro Val Leu Lys Arg His
Gln Arg Glu Ile Thr Arg Thr 1640 1645 1650 Thr Leu Gln Ser Asp Gln
Glu Glu Ile Asp Tyr Asp Asp Thr Ile 1655 1660 1665 Ser Val Glu Met
Lys Lys Glu Asp Phe Asp Ile Tyr Asp Glu Asp 1670 1675 1680 Glu Asn
Gln Ser Pro Arg Ser Phe Gln Lys Lys Thr Arg His Tyr 1685 1690 1695
Phe Ile Ala Ala Val Glu Arg Leu Trp Asp Tyr Gly Met Ser Ser 1700
1705 1710 Ser Pro His Val Leu Arg Asn Arg Ala Gln Ser Gly Ser Val
Pro 1715 1720 1725 Gln Phe Lys Lys Val Val Phe Gln Glu Phe Thr Asp
Gly Ser Phe 1730 1735 1740 Thr Gln Pro Leu Tyr Arg Gly Glu Leu Asn
Glu His Leu Gly Leu 1745 1750 1755 Leu Gly Pro Tyr Ile Arg Ala Glu
Val Glu Asp Asn Ile Met Val 1760 1765 1770 Thr Phe Arg Asn Gln Ala
Ser Arg Pro Tyr Ser Phe Tyr Ser Ser 1775 1780 1785 Leu Ile Ser Tyr
Glu Glu Asp Gln Arg Gln Gly Ala Glu Pro Arg 1790 1795 1800 Lys Asn
Phe Val Lys Pro Asn Glu Thr Lys Thr Tyr Phe Trp Lys 1805 1810 1815
Val Gln His His Met Ala Pro Thr Lys Asp Glu Phe Asp Cys Lys 1820
1825 1830 Ala Trp Ala Tyr Phe Ser Asp Val Asp Leu Glu Lys Asp Val
His 1835 1840 1845 Ser Gly Leu Ile Gly Pro Leu Leu Val Cys His Thr
Asn Thr Leu 1850 1855 1860 Asn Pro Ala His Gly Arg Gln Val Thr Val
Gln Glu Phe Ala Leu 1865 1870 1875 Phe Phe Thr Ile Phe Asp Glu Thr
Lys Ser Trp Tyr Phe Thr Glu 1880 1885 1890 Asn Met Glu Arg Asn Cys
Arg Ala Pro Cys Asn Ile Gln Met Glu 1895 1900 1905 Asp Pro Thr Phe
Lys Glu Asn Tyr Arg Phe His Ala Ile Asn Gly 1910 1915 1920 Tyr Ile
Met Asp Thr Leu Pro Gly Leu Val Met Ala Gln Asp Gln 1925 1930 1935
Arg Ile Arg Trp Tyr Leu Leu Ser Met Gly Ser Asn Glu Asn Ile 1940
1945 1950 His Ser Ile His Phe Ser Gly His Val Phe Thr Val Arg Lys
Lys 1955 1960 1965 Glu Glu Tyr Lys Met Ala Leu Tyr Asn Leu Tyr Pro
Gly Val Phe 1970 1975 1980 Glu Thr Val Glu Met Leu Pro Ser Lys Ala
Gly Ile Trp Arg Val 1985 1990 1995 Glu Cys Leu Ile Gly Glu His Leu
His Ala Gly Met Ser Thr Leu 2000 2005 2010 Phe Leu Val Tyr Ser Asn
Lys Cys Gln Thr Pro Leu Gly Met Ala 2015 2020 2025 Ser Gly His Ile
Arg Asp Phe Gln Ile Thr Ala Ser Gly Gln Tyr 2030 2035 2040 Gly Gln
Trp Ala Pro Lys Leu Ala Arg Leu His Tyr Ser Gly Ser 2045 2050 2055
Ile Asn Ala Trp Ser Thr Lys Glu Pro Phe Ser Trp Ile Lys Val 2060
2065 2070 Asp Leu Leu Ala Pro Met Ile Ile His Gly Ile Lys Thr Gln
Gly 2075 2080 2085 Ala Arg Gln Lys Phe Ser Ser Leu Tyr Ile Ser Gln
Phe Ile Ile 2090 2095 2100 Met Tyr Ser Leu Asp Gly Lys Lys Trp Gln
Thr Tyr Arg Gly Asn 2105 2110 2115 Ser Thr Gly Thr Leu Met Val Phe
Phe Gly Asn Val Asp Ser Ser 2120 2125 2130 Gly Ile Lys His Asn Ile
Phe Asn Pro Pro Ile Ile Ala Arg Tyr 2135 2140 2145 Ile Arg Leu His
Pro Thr His Tyr Ser Ile Arg Ser Thr Leu Arg 2150 2155 2160 Met Glu
Leu Met Gly
Cys Asp Leu Asn Ser Cys Ser Met Pro Leu 2165 2170 2175 Gly Met Glu
Ser Lys Ala Ile Ser Asp Ala Gln Ile Thr Ala Ser 2180 2185 2190 Ser
Tyr Phe Thr Asn Met Phe Ala Thr Trp Ser Pro Ser Lys Ala 2195 2200
2205 Arg Leu His Leu Gln Gly Arg Ser Asn Ala Trp Arg Pro Gln Val
2210 2215 2220 Asn Asn Pro Lys Glu Trp Leu Gln Val Asp Phe Gln Lys
Thr Met 2225 2230 2235 Lys Val Thr Gly Val Thr Thr Gln Gly Val Lys
Ser Leu Leu Thr 2240 2245 2250 Ser Met Tyr Val Lys Glu Phe Leu Ile
Ser Ser Ser Gln Asp Gly 2255 2260 2265 His Gln Trp Thr Leu Phe Phe
Gln Asn Gly Lys Val Lys Val Phe 2270 2275 2280 Gln Gly Asn Gln Asp
Ser Phe Thr Pro Val Val Asn Ser Leu Asp 2285 2290 2295 Pro Pro Leu
Leu Thr Arg Tyr Leu Arg Ile His Pro Gln Ser Trp 2300 2305 2310 Val
His Gln Ile Ala Leu Arg Met Glu Val Leu Gly Cys Glu Ala 2315 2320
2325 Gln Asp Leu Tyr 2330 1601245DNAHomo sapiens 160tataattcag
gtaaattgga agagtttgtt caagggaacc ttgagagaga atgtatggaa 60gaaaagtgta
gttttgaaga agcacgagaa gtttttgaaa acactgaaag aacaactgaa
120ttttggaagc agtatgttga tggagatcag tgtgagtcca atccatgttt
aaatggcggc 180agttgcaagg atgacattaa ttcctatgaa tgttggtgtc
cctttggatt tgaaggaaag 240aactgtgaat tagatgtaac atgtaacatt
aagaatggca gatgcgagca gttttgtaaa 300aatagtgctg ataacaaggt
ggtttgctcc tgtactgagg gatatcgact tgcagaaaac 360cagaagtcct
gtgaaccagc agtgccattt ccatgtggaa gagtttctgt ttcacaaact
420tctaagctca cccgtgctga ggctgttttt cctgatgtgg actatgtaaa
ttctactgaa 480gctgaaacca ttttggataa catcactcaa agcacccaat
catttaatga cttcactcgg 540gttgttggtg gagaagatgc caaaccaggt
caattccctt ggcaggttgt tttgaatggt 600aaagttgatg cattctgtgg
aggctctatc gttaatgaaa aatggattgt aactgctgcc 660cactgtgttg
aaactggtgt taaaattaca gttgtcgcag gtgaacataa tattgaggag
720acagaacata cagagcaaaa gcgaaatgtg attcgaatta ttcctcacca
caactacaat 780gcagctatta ataagtacaa ccatgacatt gcccttctgg
aactggacga acccttagtg 840ctaaacagct acgttacacc tatttgcatt
gctgacaagg aatacacgaa catcttcctc 900aaatttggat ctggctatgt
aagtggctgg ggaagagtct tccacaaagg gagatcagct 960ttagttcttc
agtaccttag agttccactt gttgaccgag ccacatgtct tcgatctaca
1020aagttcacca tctataacaa catgttctgt gctggcttcc atgaaggagg
tagagattca 1080tgtcaaggag atagtggggg accccatgtt actgaagtgg
aagggaccag tttcttaact 1140ggaattatta gctggggtga agagtgtgca
atgaaaggca aatatggaat atataccaag 1200gtatcccggt atgtcaactg
gattaaggaa aaaacaaagc tcact 1245161415PRTHomo sapiens 161Tyr Asn
Ser Gly Lys Leu Glu Glu Phe Val Gln Gly Asn Leu Glu Arg 1 5 10 15
Glu Cys Met Glu Glu Lys Cys Ser Phe Glu Glu Ala Arg Glu Val Phe 20
25 30 Glu Asn Thr Glu Arg Thr Thr Glu Phe Trp Lys Gln Tyr Val Asp
Gly 35 40 45 Asp Gln Cys Glu Ser Asn Pro Cys Leu Asn Gly Gly Ser
Cys Lys Asp 50 55 60 Asp Ile Asn Ser Tyr Glu Cys Trp Cys Pro Phe
Gly Phe Glu Gly Lys 65 70 75 80 Asn Cys Glu Leu Asp Val Thr Cys Asn
Ile Lys Asn Gly Arg Cys Glu 85 90 95 Gln Phe Cys Lys Asn Ser Ala
Asp Asn Lys Val Val Cys Ser Cys Thr 100 105 110 Glu Gly Tyr Arg Leu
Ala Glu Asn Gln Lys Ser Cys Glu Pro Ala Val 115 120 125 Pro Phe Pro
Cys Gly Arg Val Ser Val Ser Gln Thr Ser Lys Leu Thr 130 135 140 Arg
Ala Glu Ala Val Phe Pro Asp Val Asp Tyr Val Asn Ser Thr Glu 145 150
155 160 Ala Glu Thr Ile Leu Asp Asn Ile Thr Gln Ser Thr Gln Ser Phe
Asn 165 170 175 Asp Phe Thr Arg Val Val Gly Gly Glu Asp Ala Lys Pro
Gly Gln Phe 180 185 190 Pro Trp Gln Val Val Leu Asn Gly Lys Val Asp
Ala Phe Cys Gly Gly 195 200 205 Ser Ile Val Asn Glu Lys Trp Ile Val
Thr Ala Ala His Cys Val Glu 210 215 220 Thr Gly Val Lys Ile Thr Val
Val Ala Gly Glu His Asn Ile Glu Glu 225 230 235 240 Thr Glu His Thr
Glu Gln Lys Arg Asn Val Ile Arg Ile Ile Pro His 245 250 255 His Asn
Tyr Asn Ala Ala Ile Asn Lys Tyr Asn His Asp Ile Ala Leu 260 265 270
Leu Glu Leu Asp Glu Pro Leu Val Leu Asn Ser Tyr Val Thr Pro Ile 275
280 285 Cys Ile Ala Asp Lys Glu Tyr Thr Asn Ile Phe Leu Lys Phe Gly
Ser 290 295 300 Gly Tyr Val Ser Gly Trp Gly Arg Val Phe His Lys Gly
Arg Ser Ala 305 310 315 320 Leu Val Leu Gln Tyr Leu Arg Val Pro Leu
Val Asp Arg Ala Thr Cys 325 330 335 Leu Arg Ser Thr Lys Phe Thr Ile
Tyr Asn Asn Met Phe Cys Ala Gly 340 345 350 Phe His Glu Gly Gly Arg
Asp Ser Cys Gln Gly Asp Ser Gly Gly Pro 355 360 365 His Val Thr Glu
Val Glu Gly Thr Ser Phe Leu Thr Gly Ile Ile Ser 370 375 380 Trp Gly
Glu Glu Cys Ala Met Lys Gly Lys Tyr Gly Ile Tyr Thr Lys 385 390 395
400 Val Ser Arg Tyr Val Asn Trp Ile Lys Glu Lys Thr Lys Leu Thr 405
410 415 1621344DNAHomo sapiens 162 gcgaacagct ttctggaaga aatgaaaaaa
ggccatctgg aacgcgaatg catggaagaa 60acctgcagct atgaagaagc gcgcgaagtg
tttgaagata gcgataaaac caacgaattt 120tggaacaaat ataaagatgg
cgatcagtgc gaaaccagcc cgtgccagaa ccagggcaaa 180tgcaaagatg
gcctgggcga atatacctgc acctgcctgg aaggctttga aggcaaaaac
240tgcgaactgt ttacccgcaa actgtgcagc ctggataacg gcgattgcga
tcagttttgc 300catgaagaac agaacagcgt ggtgtgcagc tgcgcgcgcg
gctataccct ggcggataac 360ggcaaagcgt gcattccgac cggcccgtat
ccgtgcggca aacagaccct ggaacgccgc 420aaacgcagcg tggcgcaggc
gaccagcagc agcggcgaag cgccggatag cattacctgg 480aaaccgtatg
atgcggcgga tctggatccg accgaaaacc cgtttgatct gctggatttt
540aaccagaccc agccggaacg cggcgataac aacctgaccc gcattgtggg
cggccaggaa 600tgcaaagatg gcgaatgccc gtggcaggcg ctgctgatta
acgaagaaaa cgaaggcttt 660tgcggcggca ccattctgag cgaattttat
attctgaccg cggcgcattg cctgtatcag 720gcgaaacgct ttaaagtgcg
cgtgggcgat cgcaacaccg aacaggaaga aggcggcgaa 780gcggtgcatg
aagtggaagt ggtgattaaa cataaccgct ttaccaaaga aacctatgat
840tttgatattg cggtgctgcg cctgaaaacc ccgattacct ttcgcatgaa
cgtggcgccg 900gcgtgcctgc cggaacgcga ttgggcggaa agcaccctga
tgacccagaa aaccggcatt 960gtgagcggct ttggccgcac ccatgaaaaa
ggccgccaga gcacccgcct gaaaatgctg 1020gaagtgccgt atgtggatcg
caacagctgc aaactgagca gcagctttat tattacccag 1080aacatgtttt
gcgcgggcta tgataccaaa caggaagatg cgtgccaggg cgatagcggc
1140ggcccgcatg tgacccgctt taaagatacc tattttgtga ccggcattgt
gagctggggc 1200gaaggctgcg cgcgcaaagg caaatatggc atttatacca
aagtgaccgc gtttctgaaa 1260tggattgatc gcagcatgaa aacccgcggc
ctgccgaaag cgaaaagcca tgcgccggaa 1320gtgattacca gcagcccgct gaaa
1344163448PRTHomo sapiens 163Ala Asn Ser Phe Leu Glu Glu Met Lys
Lys Gly His Leu Glu Arg Glu 1 5 10 15 Cys Met Glu Glu Thr Cys Ser
Tyr Glu Glu Ala Arg Glu Val Phe Glu 20 25 30 Asp Ser Asp Lys Thr
Asn Glu Phe Trp Asn Lys Tyr Lys Asp Gly Asp 35 40 45 Gln Cys Glu
Thr Ser Pro Cys Gln Asn Gln Gly Lys Cys Lys Asp Gly 50 55 60 Leu
Gly Glu Tyr Thr Cys Thr Cys Leu Glu Gly Phe Glu Gly Lys Asn 65 70
75 80 Cys Glu Leu Phe Thr Arg Lys Leu Cys Ser Leu Asp Asn Gly Asp
Cys 85 90 95 Asp Gln Phe Cys His Glu Glu Gln Asn Ser Val Val Cys
Ser Cys Ala 100 105 110 Arg Gly Tyr Thr Leu Ala Asp Asn Gly Lys Ala
Cys Ile Pro Thr Gly 115 120 125 Pro Tyr Pro Cys Gly Lys Gln Thr Leu
Glu Arg Arg Lys Arg Ser Val 130 135 140 Ala Gln Ala Thr Ser Ser Ser
Gly Glu Ala Pro Asp Ser Ile Thr Trp 145 150 155 160 Lys Pro Tyr Asp
Ala Ala Asp Leu Asp Pro Thr Glu Asn Pro Phe Asp 165 170 175 Leu Leu
Asp Phe Asn Gln Thr Gln Pro Glu Arg Gly Asp Asn Asn Leu 180 185 190
Thr Arg Ile Val Gly Gly Gln Glu Cys Lys Asp Gly Glu Cys Pro Trp 195
200 205 Gln Ala Leu Leu Ile Asn Glu Glu Asn Glu Gly Phe Cys Gly Gly
Thr 210 215 220 Ile Leu Ser Glu Phe Tyr Ile Leu Thr Ala Ala His Cys
Leu Tyr Gln 225 230 235 240 Ala Lys Arg Phe Lys Val Arg Val Gly Asp
Arg Asn Thr Glu Gln Glu 245 250 255 Glu Gly Gly Glu Ala Val His Glu
Val Glu Val Val Ile Lys His Asn 260 265 270 Arg Phe Thr Lys Glu Thr
Tyr Asp Phe Asp Ile Ala Val Leu Arg Leu 275 280 285 Lys Thr Pro Ile
Thr Phe Arg Met Asn Val Ala Pro Ala Cys Leu Pro 290 295 300 Glu Arg
Asp Trp Ala Glu Ser Thr Leu Met Thr Gln Lys Thr Gly Ile 305 310 315
320 Val Ser Gly Phe Gly Arg Thr His Glu Lys Gly Arg Gln Ser Thr Arg
325 330 335 Leu Lys Met Leu Glu Val Pro Tyr Val Asp Arg Asn Ser Cys
Lys Leu 340 345 350 Ser Ser Ser Phe Ile Ile Thr Gln Asn Met Phe Cys
Ala Gly Tyr Asp 355 360 365 Thr Lys Gln Glu Asp Ala Cys Gln Gly Asp
Ser Gly Gly Pro His Val 370 375 380 Thr Arg Phe Lys Asp Thr Tyr Phe
Val Thr Gly Ile Val Ser Trp Gly 385 390 395 400 Glu Gly Cys Ala Arg
Lys Gly Lys Tyr Gly Ile Tyr Thr Lys Val Thr 405 410 415 Ala Phe Leu
Lys Trp Ile Asp Arg Ser Met Lys Thr Arg Gly Leu Pro 420 425 430 Lys
Ala Lys Ser His Ala Pro Glu Val Ile Thr Ser Ser Pro Leu Lys 435 440
445 1641821DNAHomo sapiens 164gaatgcgtga cccagctgct gaaagatacc
tgctttgaag gcggcgatat taccaccgtg 60tttaccccga gcgcgaaata ttgccaggtg
gtgtgcacct atcatccgcg ctgcctgctg 120tttaccttta ccgcggaaag
cccgagcgaa gatccgaccc gctggtttac ctgcgtgctg 180aaagatagcg
tgaccgaaac cctgccgcgc gtgaaccgca ccgcggcgat tagcggctat
240agctttaaac agtgcagcca tcagattagc gcgtgcaaca aagatattta
tgtggatctg 300gatatgaaag gcattaacta taacagcagc gtggcgaaaa
gcgcgcagga atgccaggaa 360cgctgcaccg atgatgtgca ttgccatttt
tttacctatg cgacccgcca gtttccgagc 420ctggaacatc gcaacatttg
cctgctgaaa catacccaga ccggcacccc gacccgcatt 480accaaactgg
ataaagtggt gagcggcttt agcctgaaaa gctgcgcgct gagcaacctg
540gcgtgcattc gcgatatttt tccgaacacc gtgtttgcgg atagcaacat
tgatagcgtg 600atggcgccgg atgcgtttgt gtgcggccgc atttgcaccc
atcatccggg ctgcctgttt 660tttacctttt ttagccagga atggccgaaa
gaaagccagc gcaacctgtg cctgctgaaa 720accagcgaaa gcggcctgcc
gagcacccgc attaaaaaaa gcaaagcgct gagcggcttt 780agcctgcaga
gctgccgcca tagcattccg gtgttttgcc atagcagctt ttatcatgat
840accgattttc tgggcgaaga actggatatt gtggcggcga aaagccatga
agcgtgccag 900aaactgtgca ccaacgcggt gcgctgccag ttttttacct
ataccccggc gcaggcgagc 960tgcaacgaag gcaaaggcaa atgctatctg
aaactgagca gcaacggcag cccgaccaaa 1020attctgcatg gccgcggcgg
cattagcggc tataccctgc gcctgtgcaa aatggataac 1080gaatgcacca
ccaaaattaa accgcgcatt gtgggcggca ccgcgagcgt gcgcggcgaa
1140tggccgtggc aggtgaccct gcataccacc agcccgaccc agcgccatct
gtgcggcggc 1200agcattattg gcaaccagtg gattctgacc gcggcgcatt
gcttttatgg cgtggaaagc 1260ccgaaaattc tgcgcgtgta tagcggcatt
ctgaaccaga gcgaaattaa agaagatacc 1320agcttttttg gcgtgcagga
aattattatt catgatcagt ataaaatggc ggaaagcggc 1380tatgatattg
cgctgctgaa actggaaacc accgtgaact ataccgatag ccagcgcccg
1440atttgcctgc cgagcaaagg cgatcgcaac gtgatttata ccgattgctg
ggtgaccggc 1500tggggctatc gcaaactgcg cgataaaatt cagaacaccc
tgcagaaagc gaaaattccg 1560ctggtgacca acgaagaatg ccagaaacgc
tatcgcggcc ataaaattac ccataaaatg 1620atttgcgcgg gctatcgcga
aggcggcaaa gatgcgtgca aaggcgatag cggcggcccg 1680ctgagctgca
aacataacga agtgtggcat ctggtgggca ttaccagctg gggcgaaggc
1740tgcgcgcagc gcgaacgccc gggcgtgtat accaacgtgg tggaatatgt
ggattggatt 1800ctggaaaaaa cccaggcggt g 1821165607PRTHomo sapiens
165Glu Cys Val Thr Gln Leu Leu Lys Asp Thr Cys Phe Glu Gly Gly Asp
1 5 10 15 Ile Thr Thr Val Phe Thr Pro Ser Ala Lys Tyr Cys Gln Val
Val Cys 20 25 30 Thr Tyr His Pro Arg Cys Leu Leu Phe Thr Phe Thr
Ala Glu Ser Pro 35 40 45 Ser Glu Asp Pro Thr Arg Trp Phe Thr Cys
Val Leu Lys Asp Ser Val 50 55 60 Thr Glu Thr Leu Pro Arg Val Asn
Arg Thr Ala Ala Ile Ser Gly Tyr 65 70 75 80 Ser Phe Lys Gln Cys Ser
His Gln Ile Ser Ala Cys Asn Lys Asp Ile 85 90 95 Tyr Val Asp Leu
Asp Met Lys Gly Ile Asn Tyr Asn Ser Ser Val Ala 100 105 110 Lys Ser
Ala Gln Glu Cys Gln Glu Arg Cys Thr Asp Asp Val His Cys 115 120 125
His Phe Phe Thr Tyr Ala Thr Arg Gln Phe Pro Ser Leu Glu His Arg 130
135 140 Asn Ile Cys Leu Leu Lys His Thr Gln Thr Gly Thr Pro Thr Arg
Ile 145 150 155 160 Thr Lys Leu Asp Lys Val Val Ser Gly Phe Ser Leu
Lys Ser Cys Ala 165 170 175 Leu Ser Asn Leu Ala Cys Ile Arg Asp Ile
Phe Pro Asn Thr Val Phe 180 185 190 Ala Asp Ser Asn Ile Asp Ser Val
Met Ala Pro Asp Ala Phe Val Cys 195 200 205 Gly Arg Ile Cys Thr His
His Pro Gly Cys Leu Phe Phe Thr Phe Phe 210 215 220 Ser Gln Glu Trp
Pro Lys Glu Ser Gln Arg Asn Leu Cys Leu Leu Lys 225 230 235 240 Thr
Ser Glu Ser Gly Leu Pro Ser Thr Arg Ile Lys Lys Ser Lys Ala 245 250
255 Leu Ser Gly Phe Ser Leu Gln Ser Cys Arg His Ser Ile Pro Val Phe
260 265 270 Cys His Ser Ser Phe Tyr His Asp Thr Asp Phe Leu Gly Glu
Glu Leu 275 280 285 Asp Ile Val Ala Ala Lys Ser His Glu Ala Cys Gln
Lys Leu Cys Thr 290 295 300 Asn Ala Val Arg Cys Gln Phe Phe Thr Tyr
Thr Pro Ala Gln Ala Ser 305 310 315 320 Cys Asn Glu Gly Lys Gly Lys
Cys Tyr Leu Lys Leu Ser Ser Asn Gly 325 330 335 Ser Pro Thr Lys Ile
Leu His Gly Arg Gly Gly Ile Ser Gly Tyr Thr 340 345 350 Leu Arg Leu
Cys Lys Met Asp Asn Glu Cys Thr Thr Lys Ile Lys Pro 355 360 365 Arg
Ile Val Gly Gly Thr Ala Ser Val Arg Gly Glu Trp Pro Trp Gln 370 375
380 Val Thr Leu His Thr Thr Ser Pro Thr Gln Arg His Leu Cys Gly Gly
385 390 395 400 Ser Ile Ile Gly Asn Gln Trp Ile Leu Thr Ala Ala His
Cys Phe Tyr 405 410 415 Gly Val Glu Ser Pro Lys Ile Leu Arg Val Tyr
Ser Gly Ile Leu Asn 420 425 430 Gln Ser Glu Ile Lys Glu Asp Thr Ser
Phe Phe Gly Val Gln Glu Ile 435 440 445 Ile Ile His Asp Gln Tyr Lys
Met Ala Glu Ser Gly Tyr Asp Ile Ala 450 455 460 Leu Leu Lys Leu Glu
Thr Thr Val Asn Tyr Thr Asp Ser Gln Arg Pro 465 470 475 480 Ile Cys
Leu Pro Ser Lys Gly Asp Arg Asn Val Ile Tyr Thr Asp Cys 485 490 495
Trp Val Thr Gly Trp Gly Tyr Arg Lys Leu Arg Asp Lys Ile Gln Asn 500
505 510 Thr Leu Gln Lys Ala Lys Ile Pro Leu Val Thr Asn Glu Glu Cys
Gln 515 520 525 Lys Arg Tyr Arg Gly His Lys Ile Thr His Lys Met Ile
Cys Ala Gly 530 535 540 Tyr Arg Glu Gly Gly Lys Asp Ala Cys Lys Gly
Asp Ser Gly Gly Pro 545 550 555 560 Leu Ser Cys
Lys His Asn Glu Val Trp His Leu Val Gly Ile Thr Ser 565 570 575 Trp
Gly Glu Gly Cys Ala Gln Arg Glu Arg Pro Gly Val Tyr Thr Asn 580 585
590 Val Val Glu Tyr Val Asp Trp Ile Leu Glu Lys Thr Gln Ala Val 595
600 605 166750DNAArtificial sequence0012LC.C36A-HPC4 166atgaagttgc
ctgttgggct gttggtgctg atgttctgga ttccagcttc cagcagtgat 60gttgtgatga
cccaaactcc actctccctg cctgtcagtc ttggagatca agcctccatc
120tcttgcagat ctagtcagag ccttgtacac agaaatggaa acacctattt
tcattgggcc 180ctgcagaaac caggccagtc tccaaagctc ctgatctaca
aagtttccaa ccgattttct 240ggggtcccag acaggttcag tggcagtgga
tcagggacag atttcacact caagatcagc 300agagtggagg ctgaggatct
gggagtttat ttctgctctc aaagtacaca tgttccgtac 360acgttcggag
gggggaccaa gctggaaata aaacgtacgg tggctgcacc atctgtcttc
420atcttcccgc catctgatga gcagttgaaa tctggaactg cctctgttgt
gtgcctgctg 480aataacttct atcccagaga ggccaaagta cagtggaagg
tggataacgc cctccaatcg 540ggtaactccc aggagagtgt cacagagcag
gacagcaagg acagcaccta cagcctcagc 600agcaccctga cgctgagcaa
agcagactac gagaaacaca aagtctacgc ctgcgaagtc 660acccatcagg
gcctgagctc gcccgtcaca aagagcttca acaggggaga gtgtgaggac
720caggtggacc ccagactgat cgacggcaag 750167250PRTArtificial
sequence0012LC.C36A-HPC4 167Met Lys Leu Pro Val Gly Leu Leu Val Leu
Met Phe Trp Ile Pro Ala 1 5 10 15 Ser Ser Ser Asp Val Val Met Thr
Gln Thr Pro Leu Ser Leu Pro Val 20 25 30 Ser Leu Gly Asp Gln Ala
Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu 35 40 45 Val His Arg Asn
Gly Asn Thr Tyr Phe His Trp Ala Leu Gln Lys Pro 50 55 60 Gly Gln
Ser Pro Lys Leu Leu Ile Tyr Lys Val Ser Asn Arg Phe Ser 65 70 75 80
Gly Val Pro Asp Arg Phe Ser Gly Ser Gly Ser Gly Thr Asp Phe Thr 85
90 95 Leu Lys Ile Ser Arg Val Glu Ala Glu Asp Leu Gly Val Tyr Phe
Cys 100 105 110 Ser Gln Ser Thr His Val Pro Tyr Thr Phe Gly Gly Gly
Thr Lys Leu 115 120 125 Glu Ile Lys Arg Thr Val Ala Ala Pro Ser Val
Phe Ile Phe Pro Pro 130 135 140 Ser Asp Glu Gln Leu Lys Ser Gly Thr
Ala Ser Val Val Cys Leu Leu 145 150 155 160 Asn Asn Phe Tyr Pro Arg
Glu Ala Lys Val Gln Trp Lys Val Asp Asn 165 170 175 Ala Leu Gln Ser
Gly Asn Ser Gln Glu Ser Val Thr Glu Gln Asp Ser 180 185 190 Lys Asp
Ser Thr Tyr Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys Ala 195 200 205
Asp Tyr Glu Lys His Lys Val Tyr Ala Cys Glu Val Thr His Gln Gly 210
215 220 Leu Ser Ser Pro Val Thr Lys Ser Phe Asn Arg Gly Glu Cys Glu
Asp 225 230 235 240 Gln Val Asp Pro Arg Leu Ile Asp Gly Lys 245 250
168735DNAArtificial sequence0012VH-CH1-HPC4 168atggattttg
ggctgatttt ttttattgtt gctcttttaa aaggggtcca gtgtgaggtg 60aaacttctcg
agtctggagg tggcctggtg cagcctggag gatccctgaa actctcctgt
120gcagcctcag gattcgattt tagtagatac tggatgactt gggtccggca
ggctccaggg 180aaagggctag aatggattgg agaaattaat ccagatagca
gtacgataaa ctatacgcca 240tctctaaagg ataaattcat catctccaga
gacaacgcca agaatacgct gtacctgcaa 300atgagcgaag tgagatctga
ggacacagcc ctttattact gtgcaagcgg ggtgtttact 360tcctggggcc
aagggactct ggtcactgtc tctgcagcta gcaccaaggg cccatccgtc
420ttccccctgg cgccctgctc caggagcacc tccgagagca cagccgccct
gggctgcctg 480gtcaaggact acttccccga accggtgacg gtgtcgtgga
actcaggcgc cctgaccagc 540ggcgtgcaca ccttcccggc tgtcctacag
tcctcaggac tctactccct cagcagcgtg 600gtgaccgtgc cctccagcag
cttgggcacg aagacctaca cctgcaacgt agatcacaag 660cccagcaaca
ccaaggtgga caagagagtt gagtccaaag aggaccaggt ggaccccaga
720ctgatcgacg gcaag 735169245PRTArtificial sequence0012VH-CH1-HPC4
169Met Asp Phe Gly Leu Ile Phe Phe Ile Val Ala Leu Leu Lys Gly Val
1 5 10 15 Gln Cys Glu Val Lys Leu Leu Glu Ser Gly Gly Gly Leu Val
Gln Pro 20 25 30 Gly Gly Ser Leu Lys Leu Ser Cys Ala Ala Ser Gly
Phe Asp Phe Ser 35 40 45 Arg Tyr Trp Met Thr Trp Val Arg Gln Ala
Pro Gly Lys Gly Leu Glu 50 55 60 Trp Ile Gly Glu Ile Asn Pro Asp
Ser Ser Thr Ile Asn Tyr Thr Pro 65 70 75 80 Ser Leu Lys Asp Lys Phe
Ile Ile Ser Arg Asp Asn Ala Lys Asn Thr 85 90 95 Leu Tyr Leu Gln
Met Ser Glu Val Arg Ser Glu Asp Thr Ala Leu Tyr 100 105 110 Tyr Cys
Ala Ser Gly Val Phe Thr Ser Trp Gly Gln Gly Thr Leu Val 115 120 125
Thr Val Ser Ala Ala Ser Thr Lys Gly Pro Ser Val Phe Pro Leu Ala 130
135 140 Pro Cys Ser Arg Ser Thr Ser Glu Ser Thr Ala Ala Leu Gly Cys
Leu 145 150 155 160 Val Lys Asp Tyr Phe Pro Glu Pro Val Thr Val Ser
Trp Asn Ser Gly 165 170 175 Ala Leu Thr Ser Gly Val His Thr Phe Pro
Ala Val Leu Gln Ser Ser 180 185 190 Gly Leu Tyr Ser Leu Ser Ser Val
Val Thr Val Pro Ser Ser Ser Leu 195 200 205 Gly Thr Lys Thr Tyr Thr
Cys Asn Val Asp His Lys Pro Ser Asn Thr 210 215 220 Lys Val Asp Lys
Arg Val Glu Ser Lys Glu Asp Gln Val Asp Pro Arg 225 230 235 240 Leu
Ile Asp Gly Lys 245 170714DNAArtificial
sequence0012VH.T60N-CH1-YGPPC 170atggattttg ggctgatttt ttttattgtt
gctcttttaa aaggggtcca gtgtgaggtg 60aaacttctcg agtctggagg tggcctggtg
cagcctggag gatccctgaa actctcctgt 120gcagcctcag gattcgattt
tagtagatac tggatgactt gggtccggca ggctccaggg 180aaagggctag
aatggattgg agaaattaat ccagatagca gtacgataaa ctataaccca
240tctctaaagg ataaattcat catctccaga gacaacgcca agaatacgct
gtacctgcaa 300atgagcgaag tgagatctga ggacacagcc ctttattact
gtgcaagcgg ggtgtttact 360tcctggggcc aagggactct ggtcactgtc
tctgcagcta gcaccaaggg cccatccgtc 420ttccccctgg cgccctgctc
caggagcacc tccgagagca cagccgccct gggctgcctg 480gtcaaggact
acttccccga accggtgacg gtgtcgtgga actcaggcgc cctgaccagc
540ggcgtgcaca ccttcccggc tgtcctacag tcctcaggac tctactccct
cagcagcgtg 600gtgaccgtgc cctccagcag cttgggcacg aagacctaca
cctgcaacgt agatcacaag 660cccagcaaca ccaaggtgga caagagagtt
gagtccaaat atggtccccc atgc 714171238PRTArtificial
Sequence0012VH.T60N-CH1-YGPPC 171Met Asp Phe Gly Leu Ile Phe Phe
Ile Val Ala Leu Leu Lys Gly Val 1 5 10 15 Gln Cys Glu Val Lys Leu
Leu Glu Ser Gly Gly Gly Leu Val Gln Pro 20 25 30 Gly Gly Ser Leu
Lys Leu Ser Cys Ala Ala Ser Gly Phe Asp Phe Ser 35 40 45 Arg Tyr
Trp Met Thr Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu 50 55 60
Trp Ile Gly Glu Ile Asn Pro Asp Ser Ser Thr Ile Asn Tyr Asn Pro 65
70 75 80 Ser Leu Lys Asp Lys Phe Ile Ile Ser Arg Asp Asn Ala Lys
Asn Thr 85 90 95 Leu Tyr Leu Gln Met Ser Glu Val Arg Ser Glu Asp
Thr Ala Leu Tyr 100 105 110 Tyr Cys Ala Ser Gly Val Phe Thr Ser Trp
Gly Gln Gly Thr Leu Val 115 120 125 Thr Val Ser Ala Ala Ser Thr Lys
Gly Pro Ser Val Phe Pro Leu Ala 130 135 140 Pro Cys Ser Arg Ser Thr
Ser Glu Ser Thr Ala Ala Leu Gly Cys Leu 145 150 155 160 Val Lys Asp
Tyr Phe Pro Glu Pro Val Thr Val Ser Trp Asn Ser Gly 165 170 175 Ala
Leu Thr Ser Gly Val His Thr Phe Pro Ala Val Leu Gln Ser Ser 180 185
190 Gly Leu Tyr Ser Leu Ser Ser Val Val Thr Val Pro Ser Ser Ser Leu
195 200 205 Gly Thr Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro Ser
Asn Thr 210 215 220 Lys Val Asp Lys Arg Val Glu Ser Lys Tyr Gly Pro
Pro Cys 225 230 235 1722091DNAArtificial SequenceFIX-L4b-0012LC
172atgcagcgcg tgaacatgat catggcagaa tcaccaggcc tcatcaccat
ctgcctttta 60ggatatctac tcagtgctga atgtacagtt tttcttgatc atgaaaacgc
caacaaaatt 120ctgaatcggc caaagaggta taattcaggt aaattggaag
agtttgttca agggaacctt 180gagagagaat gtatggaaga aaagtgtagt
tttgaagaag cacgagaagt ttttgaaaac 240actgaaagaa caactgaatt
ttggaagcag tatgttgatg gagatcagtg tgagtccaat 300ccatgtttaa
atggcggcag ttgcaaggat gacattaatt cctatgaatg ttggtgtccc
360tttggatttg aaggaaagaa ctgtgaatta gatgtaacat gtaacattaa
gaatggcaga 420tgcgagcagt tttgtaaaaa tagtgctgat aacaaggtgg
tttgctcctg tactgaggga 480tatcgacttg cagaaaacca gaagtcctgt
gaaccagcag tgccatttcc atgtggaaga 540gtttctgttt cacaaacttc
taagctcacc cgtgctgagg ctgtttttcc tgatgtggac 600tatgtaaatt
ctactgaagc tgaaaccatt ttggataaca tcactcaaag cacccaatca
660tttaatgact tcactcgggt tgttggtgga gaagatgcca aaccaggtca
attcccttgg 720caggttgttt tgaatggtaa agttgatgca ttctgtggag
gctctatcgt taatgaaaaa 780tggattgtaa ctgctgccca ctgtgttgaa
actggtgtta aaattacagt tgtcgcaggt 840gaacataata ttgaggagac
agaacataca gagcaaaagc gaaatgtgat tcgaattatt 900cctcaccaca
actacaatgc agctattaat aagtacaacc atgacattgc ccttctggaa
960ctggacgaac ccttagtgct aaacagctac gttacaccta tttgcattgc
tgacaaggaa 1020tacacgaaca tcttcctcaa atttggatct ggctatgtaa
gtggctgggg aagagtcttc 1080cacaaaggga gatcagcttt agttcttcag
taccttagag ttccacttgt tgaccgagcc 1140acatgtcttc gatctacaaa
gttcaccatc tataacaaca tgttctgtgc tggcttccat 1200gaaggaggta
gagattcatg tcaaggagat agtgggggac cccatgttac tgaagtggaa
1260gggaccagtt tcttaactgg aattattagc tggggtgaag agtgtgcaat
gaaaggcaaa 1320tatggaatat ataccaaggt atcccggtat gtcaactgga
ttaaggaaaa aacaaagctc 1380actggaggtg gcgggtctgg tggcggggga
tcaggcgggg gaggttccgg atccgatgtt 1440gtgatgaccc aaactccact
ctccctgcct gtcagtcttg gagatcaagc ctccatctct 1500tgcagatcta
gtcagagcct tgtacacaga aatggaaaca cctattttca ttggtgcctg
1560cagaaaccag gccagtctcc aaagctcctg atctacaaag tttccaaccg
attttctggg 1620gtcccagaca ggttcagtgg cagtggatca gggacagatt
tcacactcaa gatcagcaga 1680gtggaggctg aggatctggg agtttatttc
tgctctcaaa gtacacatgt tccgtacacg 1740ttcggagggg ggaccaagct
ggaaataaaa cgtacggtgg ctgcaccatc tgtcttcatc 1800ttcccgccat
ctgatgagca gttgaaatct ggaactgcct ctgttgtgtg cctgctgaat
1860aacttctatc ccagagaggc caaagtacag tggaaggtgg ataacgccct
ccaatcgggt 1920aactcccagg agagtgtcac agagcaggac agcaaggaca
gcacctacag cctcagcagc 1980accctgacgc tgagcaaagc agactacgag
aaacacaaag tctacgcctg cgaagtcacc 2040catcagggcc tgagctcgcc
cgtcacaaag agcttcaaca ggggagagtg t 2091173697PRTArtificial
SequenceFIX-L4b-0012LC 173Met Gln Arg Val Asn Met Ile Met Ala Glu
Ser Pro Gly Leu Ile Thr 1 5 10 15 Ile Cys Leu Leu Gly Tyr Leu Leu
Ser Ala Glu Cys Thr Val Phe Leu 20 25 30 Asp His Glu Asn Ala Asn
Lys Ile Leu Asn Arg Pro Lys Arg Tyr Asn 35 40 45 Ser Gly Lys Leu
Glu Glu Phe Val Gln Gly Asn Leu Glu Arg Glu Cys 50 55 60 Met Glu
Glu Lys Cys Ser Phe Glu Glu Ala Arg Glu Val Phe Glu Asn 65 70 75 80
Thr Glu Arg Thr Thr Glu Phe Trp Lys Gln Tyr Val Asp Gly Asp Gln 85
90 95 Cys Glu Ser Asn Pro Cys Leu Asn Gly Gly Ser Cys Lys Asp Asp
Ile 100 105 110 Asn Ser Tyr Glu Cys Trp Cys Pro Phe Gly Phe Glu Gly
Lys Asn Cys 115 120 125 Glu Leu Asp Val Thr Cys Asn Ile Lys Asn Gly
Arg Cys Glu Gln Phe 130 135 140 Cys Lys Asn Ser Ala Asp Asn Lys Val
Val Cys Ser Cys Thr Glu Gly 145 150 155 160 Tyr Arg Leu Ala Glu Asn
Gln Lys Ser Cys Glu Pro Ala Val Pro Phe 165 170 175 Pro Cys Gly Arg
Val Ser Val Ser Gln Thr Ser Lys Leu Thr Arg Ala 180 185 190 Glu Ala
Val Phe Pro Asp Val Asp Tyr Val Asn Ser Thr Glu Ala Glu 195 200 205
Thr Ile Leu Asp Asn Ile Thr Gln Ser Thr Gln Ser Phe Asn Asp Phe 210
215 220 Thr Arg Val Val Gly Gly Glu Asp Ala Lys Pro Gly Gln Phe Pro
Trp 225 230 235 240 Gln Val Val Leu Asn Gly Lys Val Asp Ala Phe Cys
Gly Gly Ser Ile 245 250 255 Val Asn Glu Lys Trp Ile Val Thr Ala Ala
His Cys Val Glu Thr Gly 260 265 270 Val Lys Ile Thr Val Val Ala Gly
Glu His Asn Ile Glu Glu Thr Glu 275 280 285 His Thr Glu Gln Lys Arg
Asn Val Ile Arg Ile Ile Pro His His Asn 290 295 300 Tyr Asn Ala Ala
Ile Asn Lys Tyr Asn His Asp Ile Ala Leu Leu Glu 305 310 315 320 Leu
Asp Glu Pro Leu Val Leu Asn Ser Tyr Val Thr Pro Ile Cys Ile 325 330
335 Ala Asp Lys Glu Tyr Thr Asn Ile Phe Leu Lys Phe Gly Ser Gly Tyr
340 345 350 Val Ser Gly Trp Gly Arg Val Phe His Lys Gly Arg Ser Ala
Leu Val 355 360 365 Leu Gln Tyr Leu Arg Val Pro Leu Val Asp Arg Ala
Thr Cys Leu Arg 370 375 380 Ser Thr Lys Phe Thr Ile Tyr Asn Asn Met
Phe Cys Ala Gly Phe His 385 390 395 400 Glu Gly Gly Arg Asp Ser Cys
Gln Gly Asp Ser Gly Gly Pro His Val 405 410 415 Thr Glu Val Glu Gly
Thr Ser Phe Leu Thr Gly Ile Ile Ser Trp Gly 420 425 430 Glu Glu Cys
Ala Met Lys Gly Lys Tyr Gly Ile Tyr Thr Lys Val Ser 435 440 445 Arg
Tyr Val Asn Trp Ile Lys Glu Lys Thr Lys Leu Thr Gly Gly Gly 450 455
460 Gly Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly Ser Asp Val
465 470 475 480 Val Met Thr Gln Thr Pro Leu Ser Leu Pro Val Ser Leu
Gly Asp Gln 485 490 495 Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu
Val His Arg Asn Gly 500 505 510 Asn Thr Tyr Phe His Trp Cys Leu Gln
Lys Pro Gly Gln Ser Pro Lys 515 520 525 Leu Leu Ile Tyr Lys Val Ser
Asn Arg Phe Ser Gly Val Pro Asp Arg 530 535 540 Phe Ser Gly Ser Gly
Ser Gly Thr Asp Phe Thr Leu Lys Ile Ser Arg 545 550 555 560 Val Glu
Ala Glu Asp Leu Gly Val Tyr Phe Cys Ser Gln Ser Thr His 565 570 575
Val Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu Glu Ile Lys Arg Thr 580
585 590 Val Ala Ala Pro Ser Val Phe Ile Phe Pro Pro Ser Asp Glu Gln
Leu 595 600 605 Lys Ser Gly Thr Ala Ser Val Val Cys Leu Leu Asn Asn
Phe Tyr Pro 610 615 620 Arg Glu Ala Lys Val Gln Trp Lys Val Asp Asn
Ala Leu Gln Ser Gly 625 630 635 640 Asn Ser Gln Glu Ser Val Thr Glu
Gln Asp Ser Lys Asp Ser Thr Tyr 645 650 655 Ser Leu Ser Ser Thr Leu
Thr Leu Ser Lys Ala Asp Tyr Glu Lys His 660 665 670 Lys Val Tyr Ala
Cys Glu Val Thr His Gln Gly Leu Ser Ser Pro Val 675 680 685 Thr Lys
Ser Phe Asn Arg Gly Glu Cys 690 695 174246PRTArtificial
Sequence0003Fab LC=0062LC-HPC4 174Met Met Ser Ser Ala Gln Phe Leu
Gly Leu Leu Leu Leu Cys Phe Gln 1 5 10 15 Gly Thr Arg Cys Asp Ile
Gln Met Thr Gln Thr Thr Ser Ser Leu Ser 20 25 30 Ala Ser Leu Gly
Asp Arg Val Thr Ile Ser Cys Arg Ala Ser Gln Asp 35 40 45 Ile Ser
Asn Tyr Leu Asn Trp Tyr Gln Gln Lys Pro Asp Gly Thr Val 50 55 60
Lys Leu Leu Ile Phe Tyr Thr Ser Arg Leu His Ser Gly Val Pro Ser 65
70 75 80 Arg Phe Ser Gly Ser Gly Ser Gly Thr Asp Tyr Ser Leu Thr
Ile Ser 85 90 95 Asn Leu
Glu Pro Glu Asp Ile Ala Thr Tyr Tyr Cys Gln Gln Asp Thr 100 105 110
Lys Leu Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu Glu Met Lys Arg 115
120 125 Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro Pro Ser Asp Glu
Gln 130 135 140 Leu Lys Ser Gly Thr Ala Ser Val Val Cys Leu Leu Asn
Asn Phe Tyr 145 150 155 160 Pro Arg Glu Ala Lys Val Gln Trp Lys Val
Asp Asn Ala Leu Gln Ser 165 170 175 Gly Asn Ser Gln Glu Ser Val Thr
Glu Gln Asp Ser Lys Asp Ser Thr 180 185 190 Tyr Ser Leu Ser Ser Thr
Leu Thr Leu Ser Lys Ala Asp Tyr Glu Lys 195 200 205 His Lys Val Tyr
Ala Cys Glu Val Thr His Gln Gly Leu Ser Ser Pro 210 215 220 Val Thr
Lys Ser Phe Asn Arg Gly Glu Cys Glu Asp Gln Val Asp Pro 225 230 235
240 Arg Leu Ile Asp Gly Lys 245 175247PRTArtificial Sequence0003Fab
VH-CH1-YGPPC=0062VH-CH1-YGPPC 175Met Glu Trp Thr Trp Val Phe Leu
Phe Leu Leu Ser Val Thr Ala Gly 1 5 10 15 Val His Ser Gln Val Gln
Leu Gln Gln Ser Gly Ala Glu Pro Met Lys 20 25 30 Pro Gly Ala Ser
Val Lys Ile Ser Cys Lys Ala Thr Gly Tyr Thr Phe 35 40 45 Ser Ser
His Trp Ile Glu Trp Ile Lys Gln Arg Pro Gly His Gly Leu 50 55 60
Glu Trp Ile Gly Glu Ile Leu Pro Gly Ser Gly Asn Thr Asn Tyr Asn 65
70 75 80 Glu Lys Phe Lys Gly Lys Ala Thr Phe Thr Ala Asp Thr Ser
Ser Asn 85 90 95 Thr Ala Tyr Met Gln Leu Ser Ser Leu Thr Ser Glu
Asp Ser Ala Val 100 105 110 Tyr Tyr Cys Ala Arg Gly Tyr Tyr Gly Leu
Asn Tyr Asp Trp Tyr Phe 115 120 125 Asp Val Trp Gly Ala Gly Thr Thr
Val Thr Val Ser Ser Ala Ser Thr 130 135 140 Lys Gly Pro Ser Val Phe
Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser 145 150 155 160 Glu Ser Thr
Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu 165 170 175 Pro
Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val His 180 185
190 Thr Phe Pro Ala Val Leu Gln Ser Ser Gly Leu Tyr Ser Leu Ser Ser
195 200 205 Val Val Thr Val Pro Ser Ser Ser Leu Gly Thr Lys Thr Tyr
Thr Cys 210 215 220 Asn Val Asp His Lys Pro Ser Asn Thr Lys Val Asp
Lys Arg Val Glu 225 230 235 240 Ser Lys Tyr Gly Pro Pro Cys 245
176246PRTArtificial Sequence0051VH-CH1-YGPPC (part of 0074Fab)
176Met Gly Trp Ser Cys Ile Ile Phe Phe Leu Val Ala Thr Ala Thr Gly
1 5 10 15 Val His Ser Gln Val Gln Leu Glu Gln Ser Gly Ala Glu Leu
Val Arg 20 25 30 Pro Gly Val Ser Val Lys Ile Ser Cys Lys Gly Ser
Gly Tyr Thr Phe 35 40 45 Thr Asp Tyr Ser Met His Trp Val Lys Gln
Ser His Ala Lys Ser Leu 50 55 60 Glu Trp Ile Gly Val Ile Ser Thr
Tyr Tyr Gly Asp Val Arg Tyr Asn 65 70 75 80 Gln Lys Phe Lys Gly Lys
Ala Thr Met Thr Val Asp Lys Ser Ser Ser 85 90 95 Thr Ala Tyr Met
Ala Leu Ala Arg Leu Thr Ser Glu Asp Ser Ala Ile 100 105 110 Tyr Tyr
Cys Ala Arg Ala Pro Met Ile Thr Thr Gly Ala Trp Phe Ala 115 120 125
Tyr Trp Gly Gln Gly Thr Leu Val Thr Val Ser Ala Ala Ser Thr Lys 130
135 140 Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser
Glu 145 150 155 160 Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr
Phe Pro Glu Pro 165 170 175 Val Thr Val Ser Trp Asn Ser Gly Ala Leu
Thr Ser Gly Val His Thr 180 185 190 Phe Pro Ala Val Leu Gln Ser Ser
Gly Leu Tyr Ser Leu Ser Ser Val 195 200 205 Val Thr Val Pro Ser Ser
Ser Leu Gly Thr Lys Thr Tyr Thr Cys Asn 210 215 220 Val Asp His Lys
Pro Ser Asn Thr Lys Val Asp Lys Arg Val Glu Ser 225 230 235 240 Lys
Tyr Gly Pro Pro Cys 245 177246PRTArtificial Sequence0051LC-HPC4
(part of 0074Fab) 177Met Lys Ser Gln Thr Gln Val Phe Val Phe Leu
Leu Leu Cys Val Ser 1 5 10 15 Gly Ala His Gly Ser Ile Val Met Thr
Gln Thr Pro Lys Phe Leu Leu 20 25 30 Val Ser Ala Gly Asp Arg Val
Thr Ile Thr Cys Lys Ala Ser Gln Ser 35 40 45 Val Ser Asn Asp Val
Ala Trp Tyr Gln Gln Lys Pro Gly Gln Ser Pro 50 55 60 Lys Leu Leu
Ile Asn Tyr Ala Ser Ser Arg Tyr Thr Gly Ile Pro Asp 65 70 75 80 Arg
Phe Thr Gly Ser Gly Tyr Gly Thr Asp Phe Thr Phe Thr Ile Ser 85 90
95 Thr Val Gln Ala Glu Asp Leu Ala Val Tyr Phe Cys Gln Gln Asp Tyr
100 105 110 Ser Ser Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu Glu Ile
Glu Arg 115 120 125 Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro Pro
Ser Asp Glu Gln 130 135 140 Leu Lys Ser Gly Thr Ala Ser Val Val Cys
Leu Leu Asn Asn Phe Tyr 145 150 155 160 Pro Arg Glu Ala Lys Val Gln
Trp Lys Val Asp Asn Ala Leu Gln Ser 165 170 175 Gly Asn Ser Gln Glu
Ser Val Thr Glu Gln Asp Ser Lys Asp Ser Thr 180 185 190 Tyr Ser Leu
Ser Ser Thr Leu Thr Leu Ser Lys Ala Asp Tyr Glu Lys 195 200 205 His
Lys Val Tyr Ala Cys Glu Val Thr His Gln Gly Leu Ser Ser Pro 210 215
220 Val Thr Lys Ser Phe Asn Arg Gly Glu Cys Glu Asp Gln Val Asp Pro
225 230 235 240 Arg Leu Ile Asp Gly Lys 245 178246PRTArtificial
Sequence0023VH-CH1-YGPPC (part of 0004Fab) 178Met Asn Leu Gly Leu
Ser Leu Ile Phe Leu Val Leu Val Leu Lys Gly 1 5 10 15 Val Gln Cys
Glu Val Arg Leu Val Glu Ser Gly Gly Gly Leu Val Gln 20 25 30 Pro
Gly Gly Ser Leu Lys Leu Ser Cys Ala Thr Ser Gly Phe Thr Phe 35 40
45 Ser Asp Tyr Phe Met Tyr Trp Ile Arg Gln Thr Pro Glu Lys Arg Leu
50 55 60 Glu Trp Val Ala Tyr Ile Ser Asn Gly Gly Asp Ser Ser Ser
Tyr Pro 65 70 75 80 Asp Thr Val Lys Gly Arg Phe Thr Ile Ser Arg Asp
Asn Ala Lys Asn 85 90 95 Thr Leu Tyr Leu Gln Met Ser Arg Leu Lys
Ser Glu Asp Thr Ala Met 100 105 110 Tyr Tyr Cys Ala Thr Asn Lys Asn
Trp Asp Asp Tyr Tyr Asp Met Asp 115 120 125 Tyr Trp Gly Gln Gly Thr
Ser Val Thr Val Ser Ser Ala Ser Thr Lys 130 135 140 Gly Pro Ser Val
Phe Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu 145 150 155 160 Ser
Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu Pro 165 170
175 Val Thr Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val His Thr
180 185 190 Phe Pro Ala Val Leu Gln Ser Ser Gly Leu Tyr Ser Leu Ser
Ser Val 195 200 205 Val Thr Val Pro Ser Ser Ser Leu Gly Thr Lys Thr
Tyr Thr Cys Asn 210 215 220 Val Asp His Lys Pro Ser Asn Thr Lys Val
Asp Lys Arg Val Glu Ser 225 230 235 240 Lys Tyr Gly Pro Pro Cys 245
179251PRTArtificial Sequence0023LC-HPC4 (part of 0004Fab) 179Met
Asp Ser Gln Ala Gln Val Leu Ile Leu Leu Leu Leu Trp Val Ser 1 5 10
15 Gly Ser Cys Gly Asp Ile Val Val Ser Gln Ser Pro Ser Ser Leu Ala
20 25 30 Val Ser Ala Gly Glu Lys Val Thr Met Ser Cys Lys Ser Ser
Gln Ser 35 40 45 Leu Leu Asn Ser Arg Thr Arg Lys Asn Tyr Leu Ala
Trp Tyr Gln Gln 50 55 60 Lys Pro Gly Gln Ser Pro Lys Leu Leu Ile
Tyr Trp Ala Ser Thr Arg 65 70 75 80 Glu Ser Gly Val Pro Asp Arg Phe
Thr Gly Ser Gly Ser Gly Thr Asp 85 90 95 Phe Thr Leu Thr Ile Ser
Ser Val Gln Ala Glu Asp Leu Ala Val Tyr 100 105 110 Tyr Cys Lys Gln
Ser Tyr Asn Leu Leu Thr Phe Gly Ala Gly Thr Lys 115 120 125 Leu Glu
Leu Lys Arg Thr Val Ala Ala Pro Ser Val Phe Ile Phe Pro 130 135 140
Pro Ser Asp Glu Gln Leu Lys Ser Gly Thr Ala Ser Val Val Cys Leu 145
150 155 160 Leu Asn Asn Phe Tyr Pro Arg Glu Ala Lys Val Gln Trp Lys
Val Asp 165 170 175 Asn Ala Leu Gln Ser Gly Asn Ser Gln Glu Ser Val
Thr Glu Gln Asp 180 185 190 Ser Lys Asp Ser Thr Tyr Ser Leu Ser Ser
Thr Leu Thr Leu Ser Lys 195 200 205 Ala Asp Tyr Glu Lys His Lys Val
Tyr Ala Cys Glu Val Thr His Gln 210 215 220 Gly Leu Ser Ser Pro Val
Thr Lys Ser Phe Asn Arg Gly Glu Cys Glu 225 230 235 240 Asp Gln Val
Asp Pro Arg Leu Ile Asp Gly Lys 245 250 180696PRTArtificial
Sequencehuman FVII-L4b-0062VH-CH1-HPC4 180Met Val Ser Gln Ala Leu
Arg Leu Leu Cys Leu Leu Leu Gly Leu Gln 1 5 10 15 Gly Cys Leu Ala
Ala Val Phe Val Thr Gln Glu Glu Ala His Gly Val 20 25 30 Leu His
Arg Arg Arg Arg Ala Asn Ala Phe Leu Glu Glu Leu Arg Pro 35 40 45
Gly Ser Leu Glu Arg Glu Cys Lys Glu Glu Gln Cys Ser Phe Glu Glu 50
55 60 Ala Arg Glu Ile Phe Lys Asp Ala Glu Arg Thr Lys Leu Phe Trp
Ile 65 70 75 80 Ser Tyr Ser Asp Gly Asp Gln Cys Ala Ser Ser Pro Cys
Gln Asn Gly 85 90 95 Gly Ser Cys Lys Asp Gln Leu Gln Ser Tyr Ile
Cys Phe Cys Leu Pro 100 105 110 Ala Phe Glu Gly Arg Asn Cys Glu Thr
His Lys Asp Asp Gln Leu Ile 115 120 125 Cys Val Asn Glu Asn Gly Gly
Cys Glu Gln Tyr Cys Ser Asp His Thr 130 135 140 Gly Thr Lys Arg Ser
Cys Arg Cys His Glu Gly Tyr Ser Leu Leu Ala 145 150 155 160 Asp Gly
Val Ser Cys Thr Pro Thr Val Glu Tyr Pro Cys Gly Lys Ile 165 170 175
Pro Ile Leu Glu Lys Arg Asn Ala Ser Lys Pro Gln Gly Arg Ile Val 180
185 190 Gly Gly Lys Val Cys Pro Lys Gly Glu Cys Pro Trp Gln Val Leu
Leu 195 200 205 Leu Val Asn Gly Ala Gln Leu Cys Gly Gly Thr Leu Ile
Asn Thr Ile 210 215 220 Trp Val Val Ser Ala Ala His Cys Phe Asp Lys
Ile Lys Asn Trp Arg 225 230 235 240 Asn Leu Ile Ala Val Leu Gly Glu
His Asp Leu Ser Glu His Asp Gly 245 250 255 Asp Glu Gln Ser Arg Arg
Val Ala Gln Val Ile Ile Pro Ser Thr Tyr 260 265 270 Val Pro Gly Thr
Thr Asn His Asp Ile Ala Leu Leu Arg Leu His Gln 275 280 285 Pro Val
Val Leu Thr Asp His Val Val Pro Leu Cys Leu Pro Glu Arg 290 295 300
Thr Phe Ser Glu Arg Thr Leu Ala Phe Val Arg Phe Ser Leu Val Ser 305
310 315 320 Gly Trp Gly Gln Leu Leu Asp Arg Gly Ala Thr Ala Leu Glu
Leu Met 325 330 335 Val Leu Asn Val Pro Arg Leu Met Thr Gln Asp Cys
Leu Gln Gln Ser 340 345 350 Arg Lys Val Gly Asp Ser Pro Asn Ile Thr
Glu Tyr Met Phe Cys Ala 355 360 365 Gly Tyr Ser Asp Gly Ser Lys Asp
Ser Cys Lys Gly Asp Ser Gly Gly 370 375 380 Pro His Ala Thr His Tyr
Arg Gly Thr Trp Tyr Leu Thr Gly Ile Val 385 390 395 400 Ser Trp Gly
Gln Gly Cys Ala Thr Val Gly His Phe Gly Val Tyr Thr 405 410 415 Arg
Val Ser Gln Tyr Ile Glu Trp Leu Gln Lys Leu Met Arg Ser Glu 420 425
430 Pro Arg Pro Gly Val Leu Leu Arg Ala Pro Phe Pro Gly Gly Gly Gly
435 440 445 Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly Ser Gln
Val Gln 450 455 460 Leu Gln Gln Ser Gly Ala Glu Pro Met Lys Pro Gly
Ala Ser Val Lys 465 470 475 480 Ile Ser Cys Lys Ala Thr Gly Tyr Thr
Phe Ser Ser His Trp Ile Glu 485 490 495 Trp Ile Lys Gln Arg Pro Gly
His Gly Leu Glu Trp Ile Gly Glu Ile 500 505 510 Leu Pro Gly Ser Gly
Asn Thr Asn Tyr Asn Glu Lys Phe Lys Gly Lys 515 520 525 Ala Thr Phe
Thr Ala Asp Thr Ser Ser Asn Thr Ala Tyr Met Gln Leu 530 535 540 Ser
Ser Leu Thr Ser Glu Asp Ser Ala Val Tyr Tyr Cys Ala Arg Gly 545 550
555 560 Tyr Tyr Gly Leu Asn Tyr Asp Trp Tyr Phe Asp Val Trp Gly Ala
Gly 565 570 575 Thr Thr Val Thr Val Ser Ser Ala Ser Thr Lys Gly Pro
Ser Val Phe 580 585 590 Pro Leu Ala Pro Cys Ser Arg Ser Thr Ser Glu
Ser Thr Ala Ala Leu 595 600 605 Gly Cys Leu Val Lys Asp Tyr Phe Pro
Glu Pro Val Thr Val Ser Trp 610 615 620 Asn Ser Gly Ala Leu Thr Ser
Gly Val His Thr Phe Pro Ala Val Leu 625 630 635 640 Gln Ser Ser Gly
Leu Tyr Ser Leu Ser Ser Val Val Thr Val Pro Ser 645 650 655 Ser Ser
Leu Gly Thr Lys Thr Tyr Thr Cys Asn Val Asp His Lys Pro 660 665 670
Ser Asn Thr Lys Val Asp Lys Arg Val Glu Ser Lys Glu Asp Gln Val 675
680 685 Asp Pro Arg Leu Ile Asp Gly Lys 690 695 181407PRTArtificial
Sequencehuman FVII-407C (C-terminal cysteine) 181Ala Asn Ala Phe
Leu Glu Glu Leu Arg Pro Gly Ser Leu Glu Arg Glu 1 5 10 15 Cys Lys
Glu Glu Gln Cys Ser Phe Glu Glu Ala Arg Glu Ile Phe Lys 20 25 30
Asp Ala Glu Arg Thr Lys Leu Phe Trp Ile Ser Tyr Ser Asp Gly Asp 35
40 45 Gln Cys Ala Ser Ser Pro Cys Gln Asn Gly Gly Ser Cys Lys Asp
Gln 50 55 60 Leu Gln Ser Tyr Ile Cys Phe Cys Leu Pro Ala Phe Glu
Gly Arg Asn 65 70 75 80 Cys Glu Thr His Lys Asp Asp Gln Leu Ile Cys
Val Asn Glu Asn Gly 85 90 95 Gly Cys Glu Gln Tyr Cys Ser Asp His
Thr Gly Thr Lys Arg Ser Cys 100 105 110 Arg Cys His Glu Gly Tyr Ser
Leu Leu Ala Asp Gly Val Ser Cys Thr 115 120 125 Pro Thr Val Glu Tyr
Pro Cys Gly Lys Ile Pro Ile Leu Glu Lys Arg 130 135 140 Asn Ala Ser
Lys Pro Gln Gly Arg Ile Val Gly Gly Lys Val Cys Pro 145 150 155 160
Lys Gly Glu Cys Pro
Trp Gln Val Leu Leu Leu Val Asn Gly Ala Gln 165 170 175 Leu Cys Gly
Gly Thr Leu Ile Asn Thr Ile Trp Val Val Ser Ala Ala 180 185 190 His
Cys Phe Asp Lys Ile Lys Asn Trp Arg Asn Leu Ile Ala Val Leu 195 200
205 Gly Glu His Asp Leu Ser Glu His Asp Gly Asp Glu Gln Ser Arg Arg
210 215 220 Val Ala Gln Val Ile Ile Pro Ser Thr Tyr Val Pro Gly Thr
Thr Asn 225 230 235 240 His Asp Ile Ala Leu Leu Arg Leu His Gln Pro
Val Val Leu Thr Asp 245 250 255 His Val Val Pro Leu Cys Leu Pro Glu
Arg Thr Phe Ser Glu Arg Thr 260 265 270 Leu Ala Phe Val Arg Phe Ser
Leu Val Ser Gly Trp Gly Gln Leu Leu 275 280 285 Asp Arg Gly Ala Thr
Ala Leu Glu Leu Met Val Leu Asn Val Pro Arg 290 295 300 Leu Met Thr
Gln Asp Cys Leu Gln Gln Ser Arg Lys Val Gly Asp Ser 305 310 315 320
Pro Asn Ile Thr Glu Tyr Met Phe Cys Ala Gly Tyr Ser Asp Gly Ser 325
330 335 Lys Asp Ser Cys Lys Gly Asp Ser Gly Gly Pro His Ala Thr His
Tyr 340 345 350 Arg Gly Thr Trp Tyr Leu Thr Gly Ile Val Ser Trp Gly
Gln Gly Cys 355 360 365 Ala Thr Val Gly His Phe Gly Val Tyr Thr Arg
Val Ser Gln Tyr Ile 370 375 380 Glu Trp Leu Gln Lys Leu Met Arg Ser
Glu Pro Arg Pro Gly Val Leu 385 390 395 400 Leu Arg Ala Pro Phe Pro
Cys 405 182697PRTArtificial Sequencehuman FIX-L4b-0061LC 182Met Gln
Arg Val Asn Met Ile Met Ala Glu Ser Pro Gly Leu Ile Thr 1 5 10 15
Ile Cys Leu Leu Gly Tyr Leu Leu Ser Ala Glu Cys Thr Val Phe Leu 20
25 30 Asp His Glu Asn Ala Asn Lys Ile Leu Asn Arg Pro Lys Arg Tyr
Asn 35 40 45 Ser Gly Lys Leu Glu Glu Phe Val Gln Gly Asn Leu Glu
Arg Glu Cys 50 55 60 Met Glu Glu Lys Cys Ser Phe Glu Glu Ala Arg
Glu Val Phe Glu Asn 65 70 75 80 Thr Glu Arg Thr Thr Glu Phe Trp Lys
Gln Tyr Val Asp Gly Asp Gln 85 90 95 Cys Glu Ser Asn Pro Cys Leu
Asn Gly Gly Ser Cys Lys Asp Asp Ile 100 105 110 Asn Ser Tyr Glu Cys
Trp Cys Pro Phe Gly Phe Glu Gly Lys Asn Cys 115 120 125 Glu Leu Asp
Val Thr Cys Asn Ile Lys Asn Gly Arg Cys Glu Gln Phe 130 135 140 Cys
Lys Asn Ser Ala Asp Asn Lys Val Val Cys Ser Cys Thr Glu Gly 145 150
155 160 Tyr Arg Leu Ala Glu Asn Gln Lys Ser Cys Glu Pro Ala Val Pro
Phe 165 170 175 Pro Cys Gly Arg Val Ser Val Ser Gln Thr Ser Lys Leu
Thr Arg Ala 180 185 190 Glu Ala Val Phe Pro Asp Val Asp Tyr Val Asn
Ser Thr Glu Ala Glu 195 200 205 Thr Ile Leu Asp Asn Ile Thr Gln Ser
Thr Gln Ser Phe Asn Asp Phe 210 215 220 Thr Arg Val Val Gly Gly Glu
Asp Ala Lys Pro Gly Gln Phe Pro Trp 225 230 235 240 Gln Val Val Leu
Asn Gly Lys Val Asp Ala Phe Cys Gly Gly Ser Ile 245 250 255 Val Asn
Glu Lys Trp Ile Val Thr Ala Ala His Cys Val Glu Thr Gly 260 265 270
Val Lys Ile Thr Val Val Ala Gly Glu His Asn Ile Glu Glu Thr Glu 275
280 285 His Thr Glu Gln Lys Arg Asn Val Ile Arg Ile Ile Pro His His
Asn 290 295 300 Tyr Asn Ala Ala Ile Asn Lys Tyr Asn His Asp Ile Ala
Leu Leu Glu 305 310 315 320 Leu Asp Glu Pro Leu Val Leu Asn Ser Tyr
Val Thr Pro Ile Cys Ile 325 330 335 Ala Asp Lys Glu Tyr Thr Asn Ile
Phe Leu Lys Phe Gly Ser Gly Tyr 340 345 350 Val Ser Gly Trp Gly Arg
Val Phe His Lys Gly Arg Ser Ala Leu Val 355 360 365 Leu Gln Tyr Leu
Arg Val Pro Leu Val Asp Arg Ala Thr Cys Leu Arg 370 375 380 Ser Thr
Lys Phe Thr Ile Tyr Asn Asn Met Phe Cys Ala Gly Phe His 385 390 395
400 Glu Gly Gly Arg Asp Ser Cys Gln Gly Asp Ser Gly Gly Pro His Val
405 410 415 Thr Glu Val Glu Gly Thr Ser Phe Leu Thr Gly Ile Ile Ser
Trp Gly 420 425 430 Glu Glu Cys Ala Met Lys Gly Lys Tyr Gly Ile Tyr
Thr Lys Val Ser 435 440 445 Arg Tyr Val Asn Trp Ile Lys Glu Lys Thr
Lys Leu Thr Gly Gly Gly 450 455 460 Gly Ser Gly Gly Gly Gly Ser Gly
Gly Gly Gly Ser Gly Ser Asp Val 465 470 475 480 Val Met Thr Gln Thr
Pro Leu Ser Leu Pro Val Ser Leu Gly Asp Gln 485 490 495 Ala Ser Ile
Ser Cys Arg Ser Ser Gln Ser Leu Val His Arg Asn Gly 500 505 510 Asn
Thr Tyr Phe His Trp Ala Leu Gln Lys Pro Gly Gln Ser Pro Lys 515 520
525 Leu Leu Ile Tyr Lys Val Ser Asn Arg Phe Ser Gly Val Pro Asp Arg
530 535 540 Phe Ser Gly Ser Gly Ser Gly Thr Asp Phe Thr Leu Lys Ile
Ser Arg 545 550 555 560 Val Glu Ala Glu Asp Leu Gly Val Tyr Phe Cys
Ser Gln Ser Thr His 565 570 575 Val Pro Tyr Thr Phe Gly Gly Gly Thr
Lys Leu Glu Ile Lys Arg Thr 580 585 590 Val Ala Ala Pro Ser Val Phe
Ile Phe Pro Pro Ser Asp Glu Gln Leu 595 600 605 Lys Ser Gly Thr Ala
Ser Val Val Cys Leu Leu Asn Asn Phe Tyr Pro 610 615 620 Arg Glu Ala
Lys Val Gln Trp Lys Val Asp Asn Ala Leu Gln Ser Gly 625 630 635 640
Asn Ser Gln Glu Ser Val Thr Glu Gln Asp Ser Lys Asp Ser Thr Tyr 645
650 655 Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys Ala Asp Tyr Glu Lys
His 660 665 670 Lys Val Tyr Ala Cys Glu Val Thr His Gln Gly Leu Ser
Ser Pro Val 675 680 685 Thr Lys Ser Phe Asn Arg Gly Glu Cys 690
695
* * * * *
References