Method of Producing L-Amino Acid

Abstract

An L-amino acid is produced by culturing a microorganism belonging to the family Enterobacteriaceae having an L-amino acid-producing ability and modified so that glycerol dehydrogenase and dihydroxyacetone kinase activities are increased, in a medium containing glycerol as a carbon source to produce and accumulate an L-amino acid in the medium or cells, and collecting the L-amino acid from the medium or the cells.

Description

[0001] This application is a Continuation of, and claims priority under 35 U.S.C. .sctn.120 to, U.S. patent application Ser. No. 12/545,966, filed Aug. 24, 2009, which was a Continuation of, and claims priority under 35 U.S.C. .sctn.120 to, PCT Patent Application No. PCT/JP2008/053020, filed Feb. 22, 2008, which claims priority under 35 U.S.C. .sctn.119 to Japanese Patent Application No. 2007-041724, filed on Feb. 22, 2007, which are incorporated in their entireties by reference. The Sequence Listing in electronic format filed herewith is also hereby incorporated by reference in its entirety (File Name: 2013-07-10T_US-405C_Seq_List; File Size: 438 KB; Date Created: Jul. 10, 2013).

BACKGROUND OF THE INVENTION

[0002] 1. Field of the Invention

[0003] The present invention is related to the field of fermentation, and more specifically to the production of L-amino acids via the fermentation of microorganisms.

[0004] 2. Brief Description of the Related Art

[0005] L-Amino acids are industrially produced by fermentation using microorganisms belonging to the genus Brevibacterium, Corynebacterium, Escherichia, or the like. In such production methods, strains are used which are isolated from nature, or artificial variants of such strains. Furthermore, microorganism strains can be used which are modified by a recombinant DNA technique to increase activity of a basic L-amino acid biosynthesis enzyme, and so forth (EP 0643135 B, EP 0733712 B, EP 1477565 A, EP 0796912 A, EP 0837134 A, WO01/53459, EP 1170376 A, WO2005/010175, and WO96/17930).

[0006] When amino acids are produced using microorganisms, sugars are generally used as a main component of substrate, but glycerol can also be used as a substrate (EP 1715055 A and EP 1715056 A).

[0007] It is known that Escherichia coli has a plurality of genes which participate in glycerol metabolism. However, it has been revealed that, since a mutant strain deficient in glpK, which is a gene coding for glycerol kinase, or glpD, which is a gene coding for glycerol-3-phosphate dehydrogenase, cannot grow in a medium when glycerol is the sole carbon source, the major glycerol assimilation pathway of E. coli consists of glycerol kinase and glycerol-3-phosphate dehydrogenase (J. Bacteriol., 23 (2006) 8259-8271).

[0008] It is known that glycerol dehydrogenase of E. coli is also one of the enzymes which participate in glycerol metabolism, and it recovers a mutant strain deficient in the three genes of glpK, glpD and glpR, which is a gene of repressor of the glp regulon, from lethality thereof in a medium containing glycerol as a sole carbon source in screening using that strain (J. Bacteriol., 131 (1977) 1026-1028).

[0009] The pathway via glycerol-3-phosphate including glycerol kinase and glycerol-3-phosphate dehydrogenase is thought to be the main glycerol assimilation pathway of microorganisms belonging to the family Enterobacteriaceae as described above, and the glycerol assimilation pathway via dihydroxyacetone is an unnecessary pathway for glycerol assimilation of microorganisms belonging to the family Enterobacteriaceae.

SUMMARY

[0010] An aspect of the present invention is to provide a method for producing an L-amino acid by fermentation using a substrate containing glycerol, which is improved compared with conventional techniques.

[0011] It has been found that enhancing either glycerol dehydrogenase or dihydroxyacetone kinase, which are enzymes of the glycerol assimilation pathway via dihydroxyacetone, was not effective for production of L-amino acids from glycerol. However, enhancing both glycerol dehydrogenase and dihydroxyacetone kinase markedly improved the production of L-amino acids from glycerol.

[0012] It is an aspect of the present invention to provide a method for producing an L-amino acid by (A) modifying a microorganism belonging to the family Enterobacteriaceae having an L-amino acid-producing ability to increase glycerol dehydrogenase and dihydroxyacetone kinase activities, (B) culturing said microorganism in a medium containing glycerol as a carbon source to produce and accumulate an L-amino acid in the medium or cells, and (C) collecting the L-amino acid from the medium or the cells.

[0013] It is a further aspect of the present invention to provide the method as described above,

[0014] wherein the glycerol dehydrogenase and dihydroxyacetone kinase activities are increased by increasing copy numbers of genes coding for glycerol dehydrogenase and dihydroxyacetone kinase, or modifying expression control sequences of the genes.

[0015] It is a further aspect of the present invention to provide the method as described above, wherein the dihydroxyacetone kinase uses ATP as a phosphate donor.

[0016] It is a further aspect of the present invention to provide the method as described above, wherein the microorganism is further modified to increase glycerol uptake activity.

[0017] It is a further aspect of the present invention to provide the method as described above, wherein the microorganism is further modified to increase the activity or activities of an enzyme selected from the group consisting of triosephosphate isomerase, fructose bisphosphate aldolase, fructose-1,6-bisphosphatase, fructose-6-phosphate aldolase, and combinations thereof.

[0018] It is a further aspect of the present invention to provide the method as described above, wherein the microorganism is further modified to reduce the activity or activities of glycerol kinase and/or membrane-binding type glycerol-3-phosphate dehydrogenase.

[0019] It is a further aspect of the present invention to provide the method as described above, wherein the microorganism belonging to the family Enterobacteriaceae is an Escherichia bacterium, or a Pantoea bacterium.

[0020] It is a further aspect of the present invention to provide the method as described above, wherein the L-amino acid is selected from the group consisting of L-glutamic acid, L-lysine, L-leucine, L-isoleucine, L-valine, L-tryptophan, L-phenylalanine, L-tyrosine, L-threonine, L-methionine, L-cysteine, L-arginine, L-serine, L-proline, L-asparatic acid, L-asparagine, L-glutamine, and L-histidine.

DETAILED DESCRIPTION OF EXEMPLARY EMBODIMENTS

[0021] Hereafter, the present invention will be explained in detail.

[0022] <1> Microorganism

[0023] Exemplary microorganisms of the present invention include a microorganism belonging to the family Enterobacteriaceae, which has an ability to produce an L-amino acid and is modified to increase glycerol dehydrogenase and dihydroxyacetone kinase activities. The ability to produce an L-amino acid (L-amino acid-producing ability) can mean an ability of exemplary microorganisms of the present invention to produce and accumulate an L-amino acid in a medium or cells when cultured in the medium. An exemplary microorganism of the present invention may have an ability to produce two or more kinds of L-amino acids. Although the microorganism having L-amino acid-producing ability may inherently have L-amino acid-producing ability, the microorganism can also be obtained by modifying such microorganisms as mentioned below using a recombinant DNA technique so that they have L-amino acid-producing ability.

[0024] Although the type of L-amino acid is not particularly limited, examples include basic amino acids such as L-lysine, L-ornithine, L-arginine, L-histidine and L-citrulline, aliphatic amino acids such as L-isoleucine, L-alanine, L-valine, L-leucine and L-glycine, amino acids which are hydroxy-monoaminocarboxylic acids such as L-threonine and L-serine, cyclic amino acids such as L-proline, aromatic amino acids such as L-phenylalanine, L-tyrosine and L-tryptophan, sulfur-containing amino acids such as L-cysteine, L-cystine and L-methionine, acidic amino acids such as L-glutamic acid and L-aspartic acid, and amino acids with amide group at the side chain such as L-glutamine and L-asparagine. An exemplary microorganism of the present invention may have an ability to produce two or more kinds of L-amino acids.

[0025] Microorganisms belonging to the family Enterobacteriaceae include Escherichia bacteria and Pantoea bacteria. Other examples of microorganisms belonging to the family Enterobacteriaceae include microorganisms belonging to .gamma.-proteobacteria such as those of the genus Enterobacter, Klebsiella, Serratia, Erwinia, Salmonella, Morganella or the like.

[0026] "Glycerol dehydrogenase" can mean an enzyme which reversibly catalyzes the following oxidation reaction that converts glycerol into dihydroxyacetone by using NAD as a coenzyme (EC:1.1.1.6).

[0027] Glycerol+NAD=Dihydroxyacetone+NADH+H.sup.+

[0028] The phrase "to increase the glycerol dehydrogenase activity" can mean that the number of the glycerol dehydrogenase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or that the activity of the glycerol dehydrogenase per molecule can be improved compared with that of a wild-type strain or non-modified strain. Moreover, when the enzyme activity is undetectable in a wild-type strain, and it is improved to a detectable level, this can also be included in the state of "the activity increases". The glycerol dehydrogenase activity can be at any level so long as it can be detected, but the modification is preferably performed so that the glycerol dehydrogenase activity is 0.05 U/mg or higher, in another example 0.25 U/mg or higher, and in another example 0.5 U/mg or higher. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth. The glycerol dehydrogenase activity can be measured by referring to the method of Ansis, R. E. et al. (J. Biol. Chem., 2-3, 153-159 (1953))

[0029] "Dihydroxyacetone kinase" is an enzyme which reversibly catalyzes the following reaction that converts dihydroxyacetone into dihydroxyacetone phosphate, and one uses ATP as a phosphate donor (EC 2.7.1.29), and one uses PEP as a phosphate donor (EC 2.7.1.29) (Cell. Mol. Life. Sci., 63 (2006) 890-900; Biochemistry, 43 (2004) 13037-13045)

[0030] ATP+dihydroxyacetone=ADP+dihydroxyacetone phosphate (EC 2.7.1.29)

[0031] Phosphoenolpyruvate+Dihydroxyacetone=Pyruvate+Dihydroxyacetone phosphate (EC2.7.1.29)

[0032] In one example, dihydroxyacetone kinase can use ATP as a phosphate donor.

[0033] The phrase "to increase the dihydroxyacetone kinase activity" can mean that number of dihydroxyacetone kinase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or that the activity of the dihydroxyacetone kinase per molecule can be improved compared with that of a wild-type strain or non-modified strain. The modification is preferably performed so that the dihydroxyacetone kinase activity per cell can be improved to 150% or more, in another example 200% or more, in another example 300% or more, of the activity of a wild-type strain or non-modified strain. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for the comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth. The dihydroxyacetone kinase activity can be measured by referring to the method of Johnson E. A. (J. Bacteriol., 1984 October; 160(1):55-60).

[0034] Examples of the gene coding for glycerol dehydrogenase include the gldA gene, and one example is the gldA gene derived from a microorganism belonging the family Enterobacteriaceae. Examples of the microorganism belonging the family Enterobacteriaceae include Escherichia coli. Examples of the gene of Escherichia coli include, for example, the gldA gene of SEQ ID NO: 1 (complementary strand of the nucleotide numbers 4135955 . . . 4137058 of GenBank Accession No. NC.sub.--000913).

[0035] Furthermore, homologues of the gene coding for glycerol dehydrogenase can be those cloned on the basis of homology to the gene exemplified above from a bacterium of the genus Escherichia, Enterobacter, Klebsiella, Serratia, Erwinia, Yersinia, Shigella, Salmonella, Vibrio, Aeromonas, Bacillus, Staphylococcus, Lactobacillus, Enterococcus, Clostridium, Pseudomonas, Agrobacterium, Citrobacter, Corynebacterium, or the like. Examples of the gene which show high homology to the gldA gene of Escherichia coli and can be used as the gene coding for glycerol dehydrogenase are mentioned in Table 1.

TABLE-US-00001 TABLE 1 Genes showing high homology to gldA gene of Escherichia coli and coding for glycerol dehydrogenase Genbank SEQ Gene Microorganism Description Accession No. ID NO gldA Shigella dysenteriae Glycerol YP_405216.1 74, 75 Sd197 dehydrogenase GI: 82778867 (NAD) gldA Salmonella Similar to E. AE008892.1 76, 77 typhimurium LT2 coli glycerol GI: 16422675 dehydrogenase (NAD) gldA Pseudomonas putida Glycerol AF148496.1 78, 79 dehydrogenase GI: 6552505 gldA Bacillus coagulans Glycerol ZP_01697292.1 80, 81 dehydrogenase GI: 124522908 and related enzymes

[0036] Homology (identity etc.) of amino acid sequences and nucleotide sequences can be determined by using, for example, the algorithm BLAST of Karlin and Altschul (Pro. Natl. Acad. Sci. USA, 90, 5873 (1993)) or FASTA of Pearson (Methods Enzymol., 183, 63 (1990)). Programs called BLASTN and BLASTX have been developed on the basis of this algorithm BLAST (refer to www.ncbi.nlm.nih.gov).

[0037] As the gene coding for dihydroxyacetone kinase, the genes designated dhaKLM gene, dak1 gene, dhaK gene and dhbK gene can be used. Examples of the gene coding for the enzyme using PEP as a phosphate donor include those genes derived from Escherichia coli, such as the dhaK gene of SEQ ID NO: 34 (complementary strand of the nucleotide numbers 1248991 . . . 1250061 of GenBank Accession No. NC.sub.--000913), the dhaL gene of SEQ ID NO: 36 (complementary strand of the nucleotide numbers 1248348.1248980 of GenBank Accession No. NC.sub.--000913), and the dhaM gene of SEQ ID NO: 38 (complementary strand of the nucleotide numbers 1246919 . . . 1248337 of GenBank Accession No. NC.sub.--000913).

[0038] The gene coding for dihydroxyacetone kinase which uses ATP as a phosphate donor can be used, and includes the dak1 gene derived from yeast, the dhbK gene derived from Agrobacterium bacteria, and the dhaK gene derived from Citrobacter bacteria. Examples of the dak1 gene derived from yeast include the dak1 gene of SEQ ID NO: 3 derived from Saccharomyces cerevisiae (GenBank Accession No NP.sub.--013641.1 GI: 6323570), examples of the dhbK gene derived from Agrobacterium bacteria include the dhbK gene of SEQ ID NO: 5 derived from Agrobacterium tumefaciens (GenBank Accession No. NP.sub.--357070.1 GI: 15891398), and examples of the dhaK gene derived from Citrobacter bacteria include the dhaK gene of SEQ ID NO: 7 derived from Citrobacter freundii (GenBank Accession No. U09771).

[0039] Furthermore, homologues of the gene coding for dihydroxyacetone kinase can be those cloned on the basis of homology to the gene exemplified above from a bacterium such as those of the genus Escherichia, Enterobacter, Klebsiella, Serratia, Erwinia, Yersinia, Shigella, Salmonella, Vibrio, Aeromonas, Bacillus, Staphylococcus, Lactobacillus, Enterococcus, Clostridium, Agrobacterium, Citrobacter, and Mycobacterium, yeast such as those of the genus Saccharomyces, Schizosaccharomyces or Pichia, or the like.

[0040] In particular, as the gene coding for dihydroxyacetone kinase which uses ATP as a phosphate donor, the following sequences can be used. Genes coding for dihydroxyacetone kinase and showing high homology to the dak1 gene derived from Saccharomyces cerevisiae are shown in Table 2, dihydroxyacetone kinase genes showing high homology to the dhbK gene derived from Agrobacterium tumefaciens are shown in Table 3, and dihydroxyacetone kinase genes showing high homology to the dhaK gene derived from Citrobacter freundii are shown in Table 4.

TABLE-US-00002 TABLE 2 Genes coding for dihydroxyacetone kinase and showing high homology to the dak1 gene derived from Saccharomyces cerevisiae Gene Microorganism Description Genbank Accession No. SEQ ID NO T43702 Schizosaccharomyces Dihydroxyacetone gi|3493578|gb|AAC78808.1| 40, 41 pombe kinase AAC27705 Pichia angusta Dihydroxyacetone gi|3171001|gb|AAC27705.1| 42, 43 kinase AAC39490.1 Pichia pastoris Dihydroxyacetone gi|3287486|gb|AAC39490.1| 44, 45 kinase CAG88710.1 Debaryomyces hansenii Dihydroxyacetone gi|49656075|emb|CAG88710.1| 46, 47 CBS767 kinase

TABLE-US-00003 TABLE 3 Genes coding for dihydroxyacetone kinase and showing high homology to the dhbK gene derived from Agrobacterium tumefaciens Gene Microorganism Description Genbank Accession No. SEQ ID NO ABF89849.1 Myxoccoccus Dihydroxyacetone gi|108464664|gb|ABF89849.1| 58, 59 xanthus DK 1622 kinase family protein ABB06761.1 Burkholderia Glycerone kinase gi|77965380|gb|ABB06761.1| 60, 61 sp. 383 Glycerone kinase [Burkholderia sp. 383] ABC38950.1 Burkholderia Dihydroxyacetone gi|83654887|gb|ABC38950.1| 62, 63 thailandensis kinase E264 EAV65448.1 Burkholderia Glycerone kinase gi|118658702|gb|EAV65448.1| 64, 65 multivorans ATCC 17616

TABLE-US-00004 TABLE 4 Genes coding for dihydroxyacetone kinase and showing high homology to the dhaK gene derived from Citrobacter freundii Gene Microorganism Description Genbank Accession No. SEQ ID NO AAX12907.1 Escherichia Dihydroxyacetone gi|60099603|gb|AAX12907.1| 48, 49 blattae kinase EAV82971.1 Enterobacter Dihydroxyacetone gi|118676428|gb|EAV82971.1| 50, 51 sp. 638 kinase EAS39398.1 Psychromonas Dihydroxyacetone gi|90311294|gb|EAS39398.1| 52, 53 sp. CNPT3 kinase EAV42339.1 Stappia Dihydroxyacetone gi|118435694|gb|EVA42339.1| 54, 55 aggregata IAM kinase protein 12614 CAK08390.1 Rhizobium Putative gi|115257295|emb|CAK08390.1| 56, 57 leguminosarum dihydroxyacetone bv. viciae 3841 kinase

[0041] "Homologues" of the aforementioned genes mean mutant genes derived from other microorganisms, or natural or artificial mutant genes, which show high structural similarity to the aforementioned genes and are able to improve the glycerol dehydrogenase activity and dihydroxyacetone kinase activity when they are introduced into a host or amplified. Homologues of glycerol dehydrogenase and dihydroxyacetone kinase genes mean genes coding for a protein showing a homology of 80% or more, in another example 90% or more, in another example 95% or more, in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 2, 4, 6 or 8 or any of the amino acid sequences encoded by the sequences mentioned in Tables 1 to 4, and having a function of glycerol dehydrogenase or dihydroxyacetone kinase. Whether a gene codes for a protein having glycerol dehydrogenase activity or dihydroxyacetone kinase activity can be confirmed by expressing the gene in a host cell and examining whether the enzymatic activity is increased compared with a non-modified strain according to the aforementioned enzymatic activity measurement method. Moreover, whether a gene is a homologue or not can be confirmed by preparing a gene-disrupted strain in which the corresponding wild-type gene is disrupted, introducing the gene into the disrupted strain, and examining whether the gene complements the function of the wild-type gene, for example, whether the enzymatic activity reduced by the gene disruption is restored.

[0042] Furthermore, the genes coding for glycerol dehydrogenase and dihydroxyacetone kinase are not limited to wild-type genes, and they may be mutant or artificially modified genes coding for a protein having an amino acid sequence of SEQ ID NO: 2, 4, 6 or 8 or any of the amino acid sequences mentioned in Table 1 to 4, and which can include substitution, deletion, insertion, addition or the like of one or more amino acid residues at one or more positions so long as the function of encoded glycerol dehydrogenase or dihydroxyacetone kinase is not reduced. Although the number of the "one or several" amino acid residues may differ depending on positions in the three-dimensional structure or types of amino acid residues of the protein, it may be specifically 1 to 20, in another example 1 to 10, in another example 1 to 5, and in another example 1 to 3. These substitutions can be conservative substitutions. The conservative substitution is a mutation wherein substitution takes place mutually among Phe, Trp and Tyr, if the substitution site is an aromatic amino acid; among Leu, Ile and Val, if it is a hydrophobic amino acid; between Gln and Asn, if it is a polar amino acid; among Lys, Arg and His, if it is a basic amino acid; between Asp and Glu, if it is an acidic amino acid; and between Ser and Thr, if it is an amino acid having a hydroxyl group. Examples of the conservative substitution include substitution of Ser or Thr for Ala, substitution of Gln, His or Lys for Arg, substitution of Glu, Gln, Lys, His or Asp for Asn, substitution of Asn, Glu or Gln for Asp, substitution of Ser or Ala for Cys, substitution of Asn, Glu, Lys, His, Asp or Arg for Gln, substitution of Gly, Asn, Gln, Lys or Asp for Glu, substitution of Pro for Gly, substitution of Asn, Lys, Gln, Arg or Tyr for His, substitution of Leu, Met, Val or Phe for Be, substitution of Be, Met, Val or Phe for Leu, substitution of Asn, Glu, Gln, His or Arg for Lys, substitution of Be, Leu, Val or Phe for Met, substitution of Trp, Tyr, Met, Ile or Leu for Phe, substitution of Thr or Ala for Ser, substitution of Ser or Ala for Thr, substitution of Phe or Tyr for Trp, substitution of His, Phe or Trp for Tyr, and substitution of Met, Ile or Leu for Val. The aforementioned amino acid substitution, deletion, insertion, addition, inversion or the like may be the result of a naturally-occurring mutation due to an individual difference or difference of species (mutant or variant) of a microorganism having the genes coding for glycerol dehydrogenase and dihydroxyacetone kinase.

[0043] The genes coding for glycerol dehydrogenase and dihydroxyacetone kinase may also be a DNA which is able to hybridize with a sequence complementary to the nucleotide sequence of SEQ ID NO: 2, 4, 6 or 8 or any of the nucleotide sequences mentioned in Table 1 to 4, or a probe that can be prepared from the nucleotide sequences, under stringent conditions, and codes for a protein having the glycerol dehydrogenase activity or the dihydroxyacetone kinase activity. The "stringent conditions" are conditions under which a so-called specific hybrid is formed, and a non-specific hybrid is not formed. Examples of the stringent condition include those under which highly homologous DNAs hybridize to each other, for example, DNAs not less than 80% homologous, in another example not less than 90% homologous, in another example not less than 95% homologous, and in another example not less than 98% homologous, hybridize to each other, and DNAs less homologous than the above do not hybridize to each other, or conditions of washing of typical Southern hybridization, i.e., washing once, preferably 2 or 3 times, at a salt concentration and temperature corresponding to 1.times.SSC, 0.1% SDS at 60.degree. C., in another example 0.1.times.SSC, 0.1% SDS at 60.degree. C., in another example 0.1.times.SSC, 0.1% SDS at 68.degree. C.

[0044] The phrase "intracellular activity of an enzyme increases" can mean when the intracellular activity of the enzyme is increased compared with a wild-type strain (for example, Escherichia coli W3110 and MG1655 strains), or a parent strain (strain in which intracellular activities of all the enzymes specified in the present invention are not enhanced), and also includes when the cells have the activity that a wild-type strain or the parent strain does not have.

[0045] Examples of the means for increasing the intracellular activity include the following means and combinations thereof. However, the means are not limited to these. As the means for increasing the activities of glycerol dehydrogenase and dihydroxyacetone kinase, any of (1) to (5) can be used, and the same or different means may be used.

[0046] (1) Increase in copy number of a gene coding for each protein by transformation using a vector containing the gene.

[0047] (2) Increase in copy number of a gene coding for each protein by integration of the gene into chromosome.

[0048] (3) Increase in expression amount of a gene coding for each protein by modification of an expression control region of the gene.

[0049] (4) Increase in expression amount by modification of a factor which affects on expression control.

[0050] (5) Increase in enzymatic activity by introduction of a mutation into a coding region of a gene coding for each protein.

[0051] (6) Increase in amount of protein by improvement of translation efficiency.

[0052] Henceforth the genes coding for glycerol dehydrogenase and dihydroxyacetone kinase can be each referred to as an objective gene.

[0053] (1) Increase in Copy Number of Gene Coding for Each Protein by Transformation Using Vector Containing the Gene

[0054] For example, a DNA fragment containing an objective gene can be ligated to a vector which functions in a host microorganism, for example, a vector of multi-copy type, to prepare a recombinant DNA, and the recombinant DNA can be introduced into a microorganism to transform it. The objective gene can be obtained by PCR (polymerase chain reaction, refer to White, T. J. et al., Trends Genet., 5, 185 (1989)) using chromosomal DNA of Escherichia coli, yeast, Citrobacter bacterium, Agrobacterium bacterium or the like as a template. The objective genes derived from other microorganisms can also be obtained from the chromosomal DNA or a chromosomal DNA library of each microorganism by PCR using, as primers, oligonucleotides prepared based on a known objective gene of the microorganism or sequence information of the objective gene or the protein of a microorganism of other species, or hybridization using an oligonucleotide prepared based on such sequence information as mentioned above as a probe. A chromosomal DNA can be prepared from a microorganism that serves as a DNA donor by the method of Saito and Miura (refer to Saito H. and Miura K., Biochem. Biophys. Acta, 72, 619 (1963); Experimental Manual for Biotechnology, edited by The Society for Biotechnology, Japan, pp. 97-98, Baifukan Co., Ltd., 1992) or the like.

[0055] Then, the objective gene amplified by PCR can be ligated to a vector DNA which can function in the cell of a host microorganism to prepare a recombinant DNA. Examples of the vector which can function in a cell of host microorganism include vectors which are autonomously replicable in cells of the host microorganism.

[0056] Examples of vectors which are autonomously replicable in microorganisms belonging to the family Enterobacteriaceae include pUC19, pUC18, pHSG299, pHSG399, pHSG398, pACYC184, (pHSG and pACYC series vectors are available from Takara Bio), RSF1010 (Gene, vol. 75(2), p271-288, 1989), pBR322, pMW219, pMW119 (pMW series vectors are available form Nippon Gene), pSTV28, pSTV29 (Takara Bio) and so forth. A phage DNA vector can also be used.

[0057] To prepare recombinant DNA by ligating any of the genes to the above-mentioned vector, the vector is digested with a restriction enzyme corresponding to termini of a DNA fragment containing the objective gene. Ligation is generally performed by using a ligase such as T4 DNA ligase. As methods for digesting and ligating DNA, preparation of chromosomal DNA, PCR, preparation of plasmid DNA, transformation, design of oligonucleotides to be used as primers and so forth, methods well known to a person skilled in the art can be employed. These methods are described in Sambrook, J., Fritsch, E. F., and Maniatis, T., "Molecular Cloning A Laboratory Manual, Second Edition", Cold Sprig Harbor Laboratory Press, (1989), and so forth.

[0058] The recombinant DNA prepared as described above may be introduced into a bacterium in accordance with a conventional known transformation method. Examples include electroporation (Canadian Journal of Microbiology, 43, 197 (1997)). It is also possible to use a method of increasing the DNA permeability by treating recipient cells with calcium chloride, which is reported for Escherichia coli K-12 (Mandel, M. and Higa, A., J. Mol. Biol., 53, 159 (1970), or a method of introducing a DNA into a competent cell prepared from a cell at proliferation stage, which is reported for Bacillus subtilis (Duncan, C. H., Wilson, G. A and Young, F. E, Gene, 1, 153 (1977)).

[0059] (2) Increase in Copy Number of Gene Coding for Each Protein by Integration of the Gene into Chromosome

[0060] Increase of intracellular activity of each enzyme can be achieved by increasing the copy number of the objective gene by introducing the objective gene into chromosomal DNA of the microorganism. Introduction of the objective gene into the chromosomal DNA of the microorganism can be attained by homologous recombination using a target sequence present on the chromosomal DNA in multiple copies. As such a sequence present on a chromosomal DNA in multiple copies, a repetitive DNA or an inverted repeat present on the termini of a transposing element can be used. Alternatively, as disclosed in Japanese Patent Laid-open (Kokai) No. 2-109985, the objective gene can be introduced into the chromosomal DNA by inserting the gene into a transposon, and transferring it so that the gene is integrated into the chromosomal DNA. Moreover, it is also possible to introduce an objective gene into a chromosome by using the Red driven integration method (WO2005/010175). An objective gene can also be introduced into a chromosome by transduction using a phage such as P1 phage, or by using a vector for conjugative transfer. Transfer of a gene to a chromosome can be confirmed by performing Southern hybridization using a part of the gene as a probe. Amplification of copy number can be confirmed by Southern hybridization using a probe complementary to the objective gene. Although the copy number may be amplified to any extent so long as it is amplified by one or more copies, the gene coding for glycerol dehydrogenase can be amplified by two or more copies, in another example three or more copies, in another example five or more copies, and the gene coding for dihydroxyacetone kinase can be amplified by two or more copies, in another example three or more copies, in another example five or more copies. When the gene is not native to the chosen host microorganism, any number of copies can be introduced, so long as one or more copies are introduced.

[0061] (3) Increase in Expression Amount of Gene Coding for Each Protein by Modification of Expression Control Region of the Gene

[0062] Furthermore, besides increasing the copy number of objective gene mentioned above, increasing the intracellular activity of each enzyme can be achieved by replacing an expression regulatory sequence such as a promoter of the gene on a chromosomal DNA or on a plasmid with a stronger promoter by the method described in WO00/18935. As strong promoters, for example, there are known the lac promoter, trp promoter, trc promoter, lambda phage PR promoter, PL promoter, 1 pp promoter, T7 promoter, tet promoter, and so forth. To amplify glycerol dehydrogenase, the tacM promoter (SEQ ID NO: 10) is one example. dhaK, dhaL and dhaM coding for dihydroxyacetone kinase of Escherichia coli take an operon structure, and expression amounts of all the three genes are improved by enhancing the promoter locating upstream of dhaK.

[0063] Moreover, it is also possible to introduce nucleotide substitution or the like into a promoter region of an objective gene to modify it into a stronger promoter. Methods for evaluating potency of promoters and examples of potent promoters are described in the paper of Goldstein et al. (Prokaryotic promoters in biotechnology, Biotechnol. Annu. Rev., 1995, 1, 105-128), and so forth. Furthermore, it is known that substitution of several nucleotides in the spacer region between the ribosome binding site (RBS) and the start codon, in particular, in the region immediately upstream of the start codon, significantly affects the translation efficiency of mRNA, and such a region can also be modified. Expression of the objective gene is enhanced by such substitution or modification of promoter.

[0064] As for substitution of a stronger promoter for a promoter on a chromosome, a promoter located upstream of the objective gene on a genome can be replaced with a stronger promoter by transforming a microorganism belonging to the family Enterobacteriaceae with a DNA containing the stronger promoter amplified by PCR or the like to cause recombination of the stronger promoter and the wild-type promoter on the genome. For such gene substitution utilizing homologous recombination, there can be utilized a method called Red-driven integration (Datsenko, K. A, and Wanner, B. L., Proc. Natl. Acad. Sci. USA, 97:6640-6645 (2000)), a method of using a linear DNA such as a method utilizing the Red driven integration in combination with an excisive system derived from .lamda. phage (Cho, E. H., Gumport, R. I., Gardner, J. F., J. Bacteriol., 184:5200-5203 (2002)) (refer to WO2005/010175), a method of using a plasmid containing a temperature sensitive replication origin (Datsenko, K. A, and Wanner, B. L., Proc. Natl. Acad. Sci. USA, 97:6640-6645 (2000), U.S. Pat. No. 6,303,383, Japanese Patent Laid-open No. 05-007491), and so forth.

[0065] (4) Increase in Expression Amount by Modification of Factor which Affects on Expression Control

[0066] Increase in expression amount by modification of a factor which affects on expression control can be attained by amplifying a gene coding for an activator which increases expression of the genes coding for glycerol dehydrogenase and dihydroxyacetone kinase, or by deleting or attenuating a gene coding for a regulator which reduces expression of the genes. Examples of the activator of dhaKLM coding for dihydroxyacetone kinase include, for example, dhaR (SEQ ID NO: 66, the nucleotide numbers 1250289.1252208 of GenBank Accession No. NC.sub.--000913), and expression amount of dhaKLM coding for dihydroxyacetone kinase is increased by a mutation of the dhaR gene (1: EMBO J., 2005 Jan. 26, 24(2):283-93). The expression amount of dhaKLM coding for dihydroxyacetone kinase is also increased by disruption of the ptsI gene (SEQ ID NO: 86, the nucleotide numbers 2532088.2533815 of GenBank Accession No. NC.sub.--000913) (Microbiology, 147 (2001) 247-253)

[0067] (5) Increase in Enzymatic Activity by Introduction of Mutation into Coding Region of Gene Coding for Each Protein

[0068] Furthermore, increase of the activities of glycerol dehydrogenase and dihydroxyacetone kinase can also be achieved by introducing a mutation which increases specific activities of the proteins or improves substrate specificities of the enzymes into the coding regions of the objective genes.

[0069] Such a gene coding for each enzyme having a mutation can be obtained by, for example, modifying the nucleotide sequence of the SEQ ID NO: 1, 3, 5 or 7, or a coding region in any of the nucleotide sequences mentioned in Tables 1 to 4, so that amino acid residues of a specific part of the encoded protein include substitution, deletion, insertion, addition or the like of amino acid residues. Furthermore, it can also be obtained by the conventionally known mutagenizing treatments described below. As for the mutagenizing treatments, by a method of treating the nucleotide sequence of the SEQ ID NO: 1, 3, 5 or 7, any of the nucleotide sequences mentioned in Tables 1 to 4, or a coding region sequence in any of these with hydroxylamine or the like in vitro, a method of treating a microorganism such as microorganisms belonging to the family Enterobacteriaceae containing the gene with ultraviolet radiation or a mutagenizing agent used for usual mutagenizing treatment such as N-methyl-N'-nitro-N-nitrosoguanidine (NTG) or ethyl methanesulfonate (EMS), error-prone PCR (Cadwell, R. C., PCR Meth. Appl., 2, 28 (1992)), DNA shuffling (Stemmer, W. P., Nature, 370, 389 (1994)), or StEP-PCR (Zhao, H., Nature Biotechnol., 16, 258 (1998)), a mutation can be artificially introduced into the genes coding for glycerol dehydrogenase and dihydroxyacetone kinase by gene recombination to obtain genes coding for highly active glycerol dehydrogenase and dihydroxyacetone kinase. Whether such mutant enzymes code for glycerol dehydrogenase and dihydroxyacetone kinase can be confirmed by, for example, introducing the genes into a microorganism belonging to the family Enterobacteriaceae and having an L-amino acid-producing ability, culturing it in a medium containing glycerol as a carbon source, and confirming whether the L-amino acid-producing ability is improved, or measuring the enzyme activities by the aforementioned methods.

[0070] (6) Increase in Amount of Protein by Improvement of Translation Efficiency

[0071] An increase in the amount of protein by improvement of translation efficiency can be attained by increasing the tRNA corresponding to codons less frequently used in the host, or by modifying the objective gene so that it has optimal codons according to frequency of use of codons in the host (Gene 85, 109-114 (1989), Biochemistry, 31, 2598-2608 (1992), J. Bacteriol., 175, 716-722 (1993), Protein Expression and Purification, 50, 49-57 (2006)). An increase in the amount of the objective protein compared with a non-modifying strain or wild-type strain can be confirmed by, for example, detection by Western blotting using antibodies (Molecular Cloning (Cold Spring Harbor Laboratory Press, Cold spring Harbor (USA), 2001)).

[0072] The microorganism can be modified to increase glycerol uptake activity, in addition to enhancing glycerol dehydrogenase and dihydroxyacetone kinase. The glycerol uptake activity can mean an activity for incorporating glycerol into cytoplasm, and a glycerol facilitator which is a membrane protein is also involved. Examples of the gene coding for the glycerol facilitator include, for example, the glpF gene of Escherichia coli (SEQ ID NO: 16, complementary strand of the nucleotide numbers 4115268.4116113 of GenBank Accession No. NC.sub.--000913).

[0073] The gene coding for the glycerol facilitator may be a DNA which hybridizes with a complementary sequence of the nucleotide sequence of SEQ ID NO: 16 or a probe which can be prepared from the complementary sequence under a stringent condition, and codes for a protein having the glycerol uptake activity. Examples also include a DNA coding for the protein of SEQ ID NO: 17. The protein can be a protein showing a homology of 80% or more, in another example 90% or more, in another example 95% or more, and in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 17, so long as it increases the glycerol uptake ability in a microorganism belonging to the family Enterobacteriaceae, when it is introduced into the microorganism.

[0074] Moreover, the gene may be a DNA coding for a protein having an amino acid sequence of SEQ ID NO: 17 including substitution, deletion, insertion, addition or the like of one or several amino acid residues, so long as the glycerol uptake activity is not reduced. The activity can be increased by a method similar to the aforementioned methods for enhancing glycerol dehydrogenase and dihydroxyacetone kinase.

[0075] The glycerol uptake activity can be measured by using the transport assay method using a membrane protein (Voegele, R. T., Sweet, G. D., and Boos, W. J., Bacteriol., 175:1087-1094 (1993)).

[0076] The microorganism can be modified to increase activities of one or more enzymes including triosephosphate isomerase, fructose bisphosphate aldolase, fructose-1,6-bisphosphatase and fructose-6-phosphate aldolase, in addition to enhancing glycerol dehydrogenase and dihydroxyacetone kinase and the enhancement of glycerol uptake activity.

[0077] Triosephosphate isomerase is an enzyme which catalyzes a reaction which reversibly converts dihydroxyacetone phosphate into glyceraldehyde-3-phosphate (EC:5.3.1.1).

[0078] Dihydroxyacetone phosphate=D-glyceraldehyde-3-phosphate

[0079] The phrase "being modified to increase the triosephosphate isomerase activity" can mean that the number of the triosephosphate isomerase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or when the activity of the triosephosphate isomerase per molecule can be improved compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the triosephosphate isomerase activity per cell can be improved to 150% or more, in another example 200% or more, in another example 300% or more, of the activity of a wil-type strain or non-modified strain. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0080] Examples of the gene coding for triosephosphate isomerase include the tpiA gene derived from Escherichia coli (SEQ ID NO: 18, complementary strand of the nucleotide numbers 4108763.4109530 of GenBank Accession No. NC.sub.--000913).

[0081] The gene coding for triosephosphate isomerase may be a DNA which hybridizes with a complementary sequence of the nucleotide sequence of SEQ ID NO: 18 or a probe which can be prepared from the complementary sequence under stringent conditions, and codes for a protein having the triosephosphate isomerase activity. Examples also include a DNA coding for the protein of SEQ ID NO: 19. The protein can be a protein showing a homology of 80% or more, in another example 90% or more, in another example 95% or more, in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 19, so long as it shows increased triosephosphate isomerase activity in a microorganism belonging to the family Enterobacteriaceae, when it is introduced into the microorganism.

[0082] Moreover, the gene may be a DNA coding for a protein having an amino acid sequence of SEQ ID NO: 19 including substitution, deletion, insertion, addition or the like of one or several amino acid residues, so long as the triosephosphate isomerase activity is not reduced.

[0083] The triosephosphate isomerase activity can be measured by using the method of Andersen and Cooper (FEBS Lett., 4, 19-20 (1969)). The activity can be increased by methods similar to the aforementioned methods for enhancing glycerol dehydrogenase and dihydroxyacetone kinase.

[0084] Fructose bisphosphate aldolase" is an enzyme which reversibly catalyzes the following reaction which converts dihydroxyacetone phosphate and glyceroaldehyde-3-phosphate into D-fructose-1,6-bisphosphate (EC:4.1.2.13).

[0085] Dihydroxyacetone phosphate (Glycerone phosphate)+D-Glyceraldehyde-3-phosphate=D-Fructose-1,6-bisphosphate

[0086] The phrase "being modified to increase the fructose bisphosphate aldolase activity" can mean that number of the fructose bisphosphate aldolase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or when the activity of the fructose bisphosphate aldolase per molecule can be improved compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the fructose bisphosphate aldolase activity per cell can be improved to 150% or more, in another example 200% or more, in another example 300% or more, of the activity of a wild-type strain or non-modified strain. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for the comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0087] Examples of the gene coding for fructose bisphosphate aldolase include the fbaA gene derived from Escherichia coli (SEQ ID NO: 20, complementary strand of the nucleotide numbers 3068187.3069266 of GenBank Accession No. NC.sub.--000913) and the fbaB gene derived from Escherichia coli (SEQ ID NO: 72, complementary strand of the nucleotide numbers 2175534 . . . 2176586 of GenBank Accession No. NC.sub.--000913).

[0088] The gene coding for fructose bisphosphate aldolase can be a DNA which hybridizes with a complementary sequence of the nucleotide sequence of SEQ ID NO: 20 or 72 or a probe which can be prepared from the complementary sequence under a stringent condition, and codes for a protein having the fructose bisphosphate aldolase activity. Examples also include a DNA coding for the protein of SEQ ID NO: 21 or 73. The protein may be show a homology of 80% or more, in another example 90% or more, in another example 95% or more, in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 21, so long as it shows increased fructose bisphosphate aldolase activity in a microorganism belonging to the family Enterobacteriaceae, when it is introduced into the microorganism.

[0089] Moreover, the gene can be a DNA coding for a protein having an amino acid sequence of SEQ ID NO: 21 or 73, but which can include substitution, deletion, insertion, addition or the like of one or several amino acid residues, so long as the fructose bisphosphate aldolase activity is not reduced.

[0090] The fructose bisphosphate aldolase activity can be measured by using the method of Richard & Rutter (J. Biol. Chem., 236, 3177-3184). The activity can be increased by methods similar to the aforementioned methods for enhancing glycerol dehydrogenase and dihydroxyacetone kinase.

[0091] The fructose-1,6-bisphosphatase is an enzyme which reversibly catalyzes the following reaction that converts D-fructose-1,6-bisphosphate into D-fructose-6-phosphate (EC:3.1.3.11).

[0092] D-Fructose-1,6-bisphosphate+H.sub.2O=D-Fructose-6-phosphate+Phospha- te

[0093] The phrase "being modified to increase the fructose-1,6-bisphosphatase activity" can mean that the number of the fructose-1,6-bisphosphatase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or when the activity of the fructose-1,6-bisphosphatase per molecule can be improved compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the fructose-1,6-bisphosphatase activity per cell can be improved to 150% or more, in another example 200% or more, in another example 300% or more, of the activity of a wild-type strain or non-modified strain. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which serve as a reference for the comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0094] Examples of the gene coding for fructose-1,6-bisphosphatase include the glpX gene (SEQ ID NO: 22, complementary strand of the nucleotide numbers 4112592.4113602 of GenBank Accession No. NC.sub.--000913), the fbp gene (SEQ ID NO: 82, the nucleotide numbers 4452634 . . . 4453632 of GenBank Accession No. NC.sub.--000913), and the ybhA gene (SEQ ID NO: 84, the nucleotide numbers 796836.7976554 of GenBank Accession No. NC.sub.--000913), which are derived from Escherichia coli. The gene coding for the fructose-1,6-bisphosphatase may be a DNA which hybridizes with a complementary sequence of the nucleotide sequence of SEQ ID NO: 22, 82 or 84 or a probe which can be prepared from the complementary sequence under a stringent condition, and codes for a protein having the fructose-1,6-bisphosphatase activity. Examples also include a DNA coding for the protein of SEQ ID NO: 23, 83 or 85. The protein may show a homology of 80% or more, in another example 90% or more, in another example 95% or more, in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 23, 83 or 85, so long as it shows increased fructose-1,6-bisphosphatase activity in a microorganism belonging to the family Enterobacteriaceae, when it is introduced into the microorganism.

[0095] Moreover, the gene can be a DNA coding for a protein having an amino acid sequence of SEQ ID NO: 23, 83 or 85, but can include substitution, deletion, insertion, addition or the like of one or several amino acid residues, so long as the fructose-1,6-bisphosphatase activity is not reduced.

[0096] The fructose-1,6-bisphosphatase activity can be measured by using the method of Nakajima et al. (Protein Nucleic Enzyme, 22, 1585-1589). The activity can be increased by methods similar to the aforementioned methods for enhancing glycerol dehydrogenase and dihydroxyacetone kinase.

[0097] In the present invention, "fructose-6-phosphate aldolase" is an enzyme which reversibly catalyzes the following reaction that converts dihydroxyacetone into fructose-6-phosphate.

[0098] D-Fructose-6-phosphate=Dihydroxyacetone+D-Glyceraldehyde-3-phosphat- e

[0099] The phrase "being modified to increase the fructose-6-phosphate aldolase activity" can mean that the number of the fructose-6-phosphate aldolase molecules per cell can be increased compared with that of a wild-type strain or non-modified strain, or when the activity of the fructose-6-phosphate aldolase per molecule can be improved compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the fructose-6-phosphate aldolase activity per cell can be improved to 150% or more, in another example 200% or more, and in another example 300% or more, of the activity observed in a wild-type strain or non-modified strain. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0100] Examples of the gene coding for fructose-6-phosphate aldolase include the fsaA gene coding for type I aldolase (SEQ ID NO: 68, the nucleotide numbers 862865.863527 of GenBank Accession No. NC.sub.--000913), and the fsaB gene (talC gene) (SEQ ID NO: 70, complementary strand of the nucleotide numbers 4137069.4137731 of GenBank Accession No. NC.sub.--000913) coding for type II aldolase, which are derived from Escherichia coli.

[0101] The gene coding for fructose-6-phosphate aldolase can be a DNA which hybridizes with a complementary sequence of the nucleotide sequence of SEQ ID NO: 68 or 70 or a probe which can be prepared from the complementary sequence under stringent conditions, and codes for a protein having the fructose-6-phosphate aldolase activity. Examples also include a DNA coding for the protein of SEQ ID NO: 69 or 71. The protein may be a protein showing a homology of 80% or more, in another example 90% or more, in another example 95% or more, and in another example 98% or more, to the total amino acid sequence of SEQ ID NO: 69 or 71, so long as it shows increased fructose-6-phosphate aldolase activity in a microorganism belonging to the family Enterobacteriaceae, when it is introduced into the microorganism.

[0102] Moreover, the gene may be a DNA coding for a protein having an amino acid sequence of SEQ ID NO: 69 or 71, but which can include substitution, deletion, insertion, addition or the like of one or several amino acid residues, so long as the fructose-6-phosphate aldolase activity is not reduced.

[0103] The fructose-6-phosphate aldolase activity can be measured by using the method of Schurmann M., Sprenger G. A. et al. (J. Biol. Chem., 2001 Apr. 6, 276 (14):11055-61). The activity can be increased by methods similar to the aforementioned methods for enhancing glycerol dehydrogenase and dihydroxyacetone kinase.

[0104] The microorganism can be modified to reduce glycerol kinase and/or membrane-binding type glycerol-3-phosphate dehydrogenase activity, in addition to the enhancement of glycerol dehydrogenase and dihydroxyacetone kinase, the enhancement of the glycerol uptake activity, and the enhancement of activities of one or more kinds of enzymes including triosephosphate isomerase, fructose bisphosphate aldolase, fructose-1,6-bisphosphatase and fructose-6-phosphate aldolase.

[0105] "Glycerol kinase" can mean an enzyme which reversibly catalyzes the following reaction that generates glycerol-3-phosphate and ADP from glycerol and ATP (EC2.7.1.30)

[0106] ATP+Glycerol=ADP+sn-Glycerol-3-phosphate

[0107] The phrase "being modified to reduce the glycerol kinase activity" can mean that the number of the glycerol kinase molecules per cell can be decreased compared with that of a wild-type strain or non-modified strain, or a state that the activity of the glycerol kinase per molecule can be reduced compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the glycerol kinase activity per cell can be reduced to 70% or less, in another example 50% or less, in another example 30% or less, in another example 20% or less, of the activity of a wild-type strain or non-modified strain, and the enzymatic activity can be deleted. The enzymatic activity can be decreased by reducing the expression amount of the gene coding for the enzyme. Reduction of the expression amount of the gene includes reduction of the transcription amount of mRNA transcribed from the gene and reduction of translation amount of this mRNA.

[0108] Complete elimination of the production of the enzyme protein molecule or reduction or deletion of the activity per enzyme protein molecule is attained by disrupting the gene coding for the enzyme. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0109] Examples of the gene coding for glycerol kinase include the glpK gene (SEQ ID NO: 24, complementary strand of the nucleotide numbers 4113737.4115245 of GenBank Accession No. NC.sub.--000913) derived from Escherichia coli. The enzymatic activity of glycerol kinase can be measured by the method of Thorner & Paulus (The Enzymes, 3rd ed., 8, 487-508).

[0110] "Membrane-binding type glycerol-3-phosphate dehydrogenase" is an enzyme which catalyzes the oxidation reaction converting glycerol-3-phosphate to dihydroxyacetone phosphate, and is an enzyme which reversibly catalyzes the following reaction.

[0111] sn-Glycerol-3P+Ubiquinone=Dihydroxyacetone-P+Ubiquinol (EC:1.1.99.5)

[0112] The phrase "being modified to reduce the membrane-binding type glycerol-3-phosphate dehydrogenase activity" can mean that the number of the membrane-binding type glycerol-3-phosphate dehydrogenase molecules per cell is decreased compared with that of a wild-type strain or non-modified strain, or a state that the activity of the membrane-binding type glycerol-3-phosphate dehydrogenase per molecule is reduced compared with that of a wild-type strain or non-modified strain. The modification can be performed so that the membrane-binding type glycerol-3-phosphate dehydrogenase activity per cell is reduced to 70% or less, in another example 50% or less, in another example 30% or less, of the activity of a wild-type strain or non-modified strain, and the enzymatic activity may be deleted. The enzymatic activity can be decreased by reducing the expression amount of the gene coding for the enzyme. Examples of wild-type strains of the microorganism belonging to the family Enterobacteriaceae which can serve as a reference for comparison include the Escherichia coli MG1655 strain (ATCC No. 47076) and W3110 strain (ATCC No. 27325), Pantoea ananatis AJ13335 strain (FERM BP-6615), and so forth.

[0113] The membrane-binding type glycerol-3-phosphate dehydrogenase is encoded by the glpABC operon and the glpD gene, and examples of the glpA gene of Escherichia coli include the sequence of SEQ ID NO: 26 (the nucleotide numbers 2350669.2352297 of GenBank Accession No. NC.sub.--000913), examples of the glpB gene of Escherichia coli include the sequence of SEQ ID NO: 28 (the nucleotide numbers 2352287.2353546 of GenBank Accession No. NC.sub.--000913), examples of the glpC gene of Escherichia coli include the sequence of SEQ ID NO: 30 (the nucleotide numbers 2353543.2354733 of GenBank Accession No. NC.sub.--000913), and examples of the glpD gene of Escherichia coli include the sequence of SEQ ID NO: 32 (the nucleotide numbers 3560036.3561541 of GenBank Accession No. NC.sub.--000913).

[0114] Reduction of activity of an objective enzyme such as glycerol kinase and glycerol-3-phosphate dehydrogenase mentioned above can be attained by

[0115] (1) reduction or deletion of the enzymatic activity by introduction of a mutation into a coding region of a gene coding for the objective enzyme, or

[0116] (2) reduction or deletion of the enzymatic activity by modification of an expression control sequence of a gene coding for the objective enzyme.

[0117] (1) Reduction or deletion of enzymatic activity by introduction of mutation into coding region of gene coding for objective enzyme

[0118] Introduction of a mutation into a coding region of a gene coding for an objective enzyme can be attained by introducing a mutation for an amino acid substitution (missense mutation), a stop codon (nonsense mutation), or a frame shift mutation which adds or deletes one or two nucleotides into a region of the objective gene coding for the enzyme on a chromosome by genetic recombination (Journal of Biological Chemistry, 272:8611-8617 (1997); Proceedings of the National Academy of Sciences, USA, 95 5511-5515 (1998); Journal of Biological Chemistry, 266, 20833-20839 (1991)). It can also be attained by deleting a part or all of the gene in the coding region. Specifically, it can be attained by introducing a mutation into a part of DNA of SEQ ID NO: 24, 26, 28, 30 or 32, or deleting a part or all of such DNA.

[0119] As for the introduction of mutation, the enzymatic activity can also be reduced or deleted by constructing a gene coding for a mutant enzyme of which the coding region is deleted or introduced with a mutation, and substituting the constructed gene for the normal gene on a chromosome by homologous recombination or the like, or by introducing a transposon or IS factor into the gene.

[0120] For introduction of such mutations for reducing or deleting activity of an enzyme as described above into a gene by genetic recombination, for example, the following methods are used. By modifying a partial sequence of an objective gene to prepare a mutant gene designed so that it does not produce an enzyme that functions normally, and transforming a microorganism belonging to the family Enterobacteriaceae with a DNA containing the gene to cause recombination of the mutant gene and the corresponding gene on a chromosome, the objective gene on a chromosome can be replaced with the mutant gene. For such gene substitution utilizing homologous recombination, there can be utilized a method called Red-driven integration (Datsenko, K. A, and Wanner, B. L., Proc. Natl. Acad. Sci. USA, 97:6640-6645 (2000)), a method of using a linear DNA such as a method utilizing the Red driven integration in combination with an excisive system derived from .lamda. phage (Cho, E. H., Gumport, R. I., Gardner, J. F., J. Bacteriol., 184:5200-5203 (2002)), a method of using a plasmid containing a temperature sensitive replication origin (Datsenko, K. A, and Wanner, B. L., Proc. Natl. Acad. Sci. USA, 97:6640-6645 (2000), U.S. Pat. No. 6,303,383, Japanese Patent Laid-open No. 05-007491), and so forth. Moreover, such site-specific mutagenesis based on gene substitution utilizing homologous recombination as described above can also be performed by using a plasmid which is not able to replicate in a host. Moreover, reduction or deletion of the enzymatic activity can also be attained by modification for introducing a mutation into a coding region of an objective gene caused by a usual mutation treatment based on X-ray or ultraviolet irradiation or use of a mutation agent such as N-methyl-N'-nitro-N-nitrosoguanidine.

[0121] (2) Reduction or deletion of enzymatic activity by modification of expression control sequence of gene coding for objective enzyme

[0122] Reduction or deletion of an enzymatic activity by modification of an expression control sequence of a gene coding for an objective enzyme can also be attained by reducing the expression amount by introducing a mutation into an expression control sequence such as a promoter and SD sequence on a chromosomal DNA, by amplifying a gene coding for a regulator which reduces expression of the gene, or by deleting or attenuating a gene coding for an activator which improves expression of the gene. Methods for evaluating potency of promoters and examples of potent promoters are described in the paper of Goldstein et al. (Prokaryotic promoters in biotechnology, Biotechnol. Annu. Rev., 1995, 1, 105-128), and so forth. Furthermore, it is known that by replacing several nucleotides in the spacer region between the ribosome binding site (RBS) and the start codon, in particular, in the region immediately upstream from the start codon, the translation efficiency of mRNA can be significantly affected, and such a region can also be modified. In particular, the glpA, B and C genes take an operon structure, and therefore the expression amount thereof can be reduced by introducing a mutation into an expression control region such as a promoter region locating upstream of glpA.

[0123] <2> Production Method

[0124] An exemplary production method of the present invention is a method for producing an L-amino acid, which includes culturing a microorganism belonging to the family Enterobacteriaceae, having an L-amino acid-producing ability and modified to increase glycerol dehydrogenase and dihydroxyacetone kinase activities in a medium containing glycerol as a carbon source to produce and accumulate an L-amino acid in the medium or cells, and collecting the L-amino acid from the medium or the cells. Any batch culture, fed-batch culture, or continuous culture may be used. Glycerol contained in the medium can be contained in the starting medium, feed medium, or both.

[0125] The aforementioned fed-batch culture refers to a culture method in which the medium is continuously or intermittently fed into the culture vessel, and the medium is not extracted until the end of the culture. The continuous culture can mean a method in which the medium is continuously or intermittently fed into the culture vessel, and the medium is extracted from the vessel (usually in a volume equal to the volume of the fed medium) at the same time. The starting medium can mean a medium used in batch culture before feeding the feed medium in the fed-batch culture or continuous culture (medium used at the start of the culture). The feed medium can mean a medium which is supplied to the fermentation tank in the fed-batch culture or continuous culture. The batch culture can mean a method in which fresh medium is prepared for every culture, a strain is inoculated into the fresh medium, and medium is not added thereafter until harvest.

[0126] The glycerol present in the medium can be the sole carbon source, or a mixed medium can be used which contains other carbon sources in addition to glycerol. Saccharides can be used such as glucose, fructose, sucrose, lactose, galactose, blackstrap molasses, and a sugar solution obtained by hydrolysis of starch hydrolysate or biomass, alcohols such as ethanol, and organic acids such as fumaric acid, citric acid, and succinic acid. When a mixed medium is used, glycerol can be present in the medium at a ratio of 50% or more, in another example 60% or more, in another example 70% or more, in another example 80% or more, in another example 90% or more. Glycerol obtained as a by-product of biodiesel fuel production can also be used (Mu Y, et al, Biotechnol Lett., 28, 1755-91759 (2006); Haas M. J., et al., Bioresour. Technol., 97, 4, 671-8678 (2006)).

[0127] As for other components which can be added to the medium, a typical medium can contain, besides the carbon source, a nitrogen source, inorganic ions, and other organic components as required can be used. As the nitrogen source, ammonia, ammonium salts such as ammonium sulfate, ammonium carbonate, ammonium chloride, ammonium phosphate, ammonium acetate and urea, nitrates, and so forth can be used. Ammonia gas and aqueous ammonia used to adjust the pH can also be utilized as the nitrogen source. Furthermore, peptone, yeast extract, meat extract, malt extract, corn steep liquor, soybean hydrolysate, and so forth can also be utilized. The medium can contain one or more of these nitrogen sources. These nitrogen sources can also be used for both the starting medium and the feed medium. Furthermore, the same nitrogen source can be used for both the starting medium and the feed medium, or the nitrogen source of the feed medium may be different from that of the starting medium.

[0128] The medium can contain a phosphoric acid source and a sulfur source in addition to the carbon source, the nitrogen source and sulfur. As the phosphoric acid source, potassium dihydrogenphosphate, dipotassium hydrogenphosphate, phosphate polymers such as pyrophosphoric acid and so forth can be utilized. The sulfur source may be any sulfur source so long as it contains a sulfur atom, and salts of sulfuric acid such as sulfates, thiosulfates and sulfites and sulfur-containing amino acids such as cysteine, cystine and glutathione are examples. Among these, ammonium sulfate is another example.

[0129] Furthermore, the medium can contain a growth promoting factor (nutrient having a growth promoting effect) in addition to the carbon source, the nitrogen source and sulfur. As the growth promoting factor, trace metals, amino acids, vitamins, nucleic acids as well as peptone, casamino acid, yeast extract, soybean protein degradation product and so forth containing the foregoing substances can be used. Examples of the trace metals include iron, manganese, magnesium, calcium and so forth. Examples of the vitamins include vitamin B.sub.1, vitamin B.sub.2, vitamin B.sub.6, nicotinic acid, nicotinic acid amide, vitamin B.sub.12 and so forth. These growth promoting factors may be contained in the starting medium or the feed medium.

[0130] When an auxotrophic mutant that requires an amino acid or the like for growth thereof is used, the required nutrient should be supplemented to the medium. In particular, since L-lysine biosynthetic pathway is enhanced and L-lysine degrading ability is attenuated in many of L-lysine-producing bacteria as described below, one or more types of substances, such as L-threonine, L-homoserine, L-isoleucine and L-methionine can be added.

[0131] The starting medium and the feed medium can have the same or different compositions. Furthermore, the starting medium and the feed medium may have the same or different sulfur concentrations. Furthermore, when the feed medium is fed at multiple stages, the compositions of the feed media may be the same or different.

[0132] The culture is preferably performed as an aeration culture at a fermentation temperature of 20 to 45.degree. C., particularly preferably at 30 to 42.degree. C. The oxygen concentration is adjusted to 5 to 50%, desirably about 10%. Furthermore, the aeration culture is preferably performed with pH adjusted to 5 to 9. If pH drops during the culture, for example, calcium carbonate or an alkali such as ammonia gas and aqueous ammonia can be added to neutralize the culture. When the culture is performed for about 10 to 120 hours, a marked amount of L-amino acid accumulates in the culture medium. Although the concentration of L-amino acid which accumulates is not limited so long as it is higher than that observed with wild-type strains, and the L-amino acid can be isolated and collected from the medium, it may be 50 g/L or higher, in another example 75 g/L or higher, and in another example 100 g/L or higher.

[0133] The L-amino acid can be collected by a known collection method from the culture medium after the culture. For example, by removing cells from the culture medium by centrifugation or the like, and then crystallizing the L-amino acid by concentration, the L-amino acid can be collected.

[0134] The culture of the microorganism can be performed as a seed culture and main culture in order to ensure accumulation of the L-amino acid higher than a certain level. The seed culture can be performed as a shaking culture using a flask or the like, or batch culture, and the main culture can be performed as fed-batch culture or continuous culture. Alternatively, both the seed culture and the main culture can be performed as batch culture.

[0135] When fed-batch culture or continuous culture is performed, the feed medium can be intermittently fed so that the supply of glycerol and other carbon sources is temporarily stopped. The supply of the feed medium can be stopped for, at maximum, 30% or less, in another example 20% or less, and in another example 10% or less, of the feeding time. When the feed medium is intermittently fed, the feed medium can be initially added over a predetermined time, and the second and following additions can be controlled so that they are started when an elevation of pH or dissolved oxygen concentration is detected by a computer upon depletion of the carbon source in the fermentation medium. This usually occurs during the period when no medium is being fed, and prior to when the medium is fed, and thus the substrate concentration in the culture tank is always automatically maintained at a low level (U.S. Pat. No. 5,912,113).

[0136] The feed medium used for the fed-batch culture can be a medium containing glycerol or another carbon source and a nutrient having a growth promoting effect (growth promoting factor), and the glycerol concentration and the other carbon source concentration in the fermentation medium can be controlled to be at predetermined concentrations or lower. As the other carbon source, glucose, sucrose and fructose are examples. As the growth promoting factor, nitrogen source, phosphoric acid, amino acids and so forth are examples. As the nitrogen source, ammonia, ammonium salts such as ammonium sulfate, ammonium carbonate, ammonium chloride, ammonium phosphate, ammonium acetate and urea, nitrates and so forth can be used. Further, as the phosphoric acid source, potassium dihydrogenphosphate and dipotassium hydrogenphosphate can be used. As for the amino acids, when an auxotrophic mutant strain is used, the required nutrients can be added. Further, the feed medium can include one type of medium, or a mixture of two or more types of media. When two or more types of feed media are used, the media may be mixed and fed by using one feed tin or fed by using two or more feed tins.

[0137] When the continuous culture method is used, the medium may be extracted and fed simultaneously, or a part of the medium may be extracted, and then the medium may be fed. Further, the method may also be a continuous culture method which includes extracting the culture medium containing the L-amino acid and bacterial cells and returning only the cells to the fermenter to reuse the cells (French Patent No. 2669935). As the method of continuously or intermittently feeding a nutrient source, the same method as used in the fed-batch culture can be used.

[0138] The continuous culture method of reusing bacterial cells is a method of intermittently or continuously extracting the fermentation medium when the amino acid concentration reaches a predetermined level, extracting only the L-amino acid and re-circulating filtration residues containing bacterial cells into the fermenter, and it can be performed by referring to, for example, French Patent No. 2669935.

[0139] When the culture medium is intermittently extracted, a portion of the amount of L-amino acid can be extracted when the L-amino acid concentration reaches a predetermined level, and fresh medium is fed to continue the culture. Further, as for the volume of the medium to be added, the culture can be performed so that the final volume of the medium after the addition of the medium is equal to the volume of the culture medium before the extraction. The term "equal" can mean that the volume corresponds to about 93 to 107% of the volume of the culture medium before the extraction.

[0140] When the culture medium is continuously extracted, the extraction can be started at the same time as or after the feeding of the nutrient medium. For example, the starting time of the extraction is, at maximum, 5 hours, in another example3 hours, and in another example 1 hour, after the start of the feeding. Further, the extraction volume of the culture medium is preferably equal to the volume of the medium fed.

[0141] <3> Microorganisms which can be Used as Parent Strains to Derive Exemplary Microorganisms of the Present Invention

[0142] A bacterium belonging to the family Enterobacteriaceae and having an L-amino acid-producing ability, which can metabolize glycerol as a carbon source, can be used as a parent strain, and the desired property can be imparted by the aforementioned methods.

[0143] The family Enterobacteriaceae encompasses bacteria belonging to the genera of Escherichia, Enterobacter, Erwinia, Klebsiella, Pantoea, Photorhabdus, Providencia, Salmonella, Serratia, Shigella, Morganella, Yersinia, and so forth. In particular, bacteria classified into the family Enterobacteriaceae according to the taxonomy used by the NCBI (National Center for Biotechnology Information) database (http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=91347) are examples.

[0144] The expression of "a bacterium belonging to the genus Escherichia" can mean that the bacterium is classified into the genus Escherichia according to classification known to a person skilled in the art of microbiology, although the bacterium is not particularly limited. Examples of the bacterium belonging to the genus Escherichia include, but are not limited to, Escherichia coli (E. coli).

[0145] The bacterium belonging to the genus Escherichia is not particularly limited. However, examples include, for example, the bacteria of the phyletic groups described in the work of Bachmann et al., Table 1 (Bachmann, B. J., 1996, pp. 2460-2488, In F. D. Neidhardt (ed.), Escherichia coli and Salmonella: Cellular and Molecular Biology/Second Edition, American Society for Microbiology Press, Washington, D.C.). Specific examples include the Escherichia coli W3110 (ATCC 27325), Escherichia coli MG1655 (ATCC 47076) and so forth derived from the prototype wild-type strain, K12 strain.

[0146] These strains are available from, for example, American Type Culture Collection (Address: 12301 Parklawn Drive, Rockville, Md. 20852, United States of America). That is, accession numbers are given to each of the strains, and the strains can be ordered by using these numbers. The accession numbers of the strains are listed in the catalogue of the American Type Culture Collection.

[0147] The expression "bacterium belonging to the genus Pantoea" can mean that the bacterium is classified into the genus Pantoea according to classification known to a person skilled in the art of microbiology. Some strains of Enterobacter agglomerans have been recently re-classified into Pantoea agglomerans, Pantoea ananatis, Pantoea stewartii or the like based on the nucleotide sequence analysis of 16S rRNA etc. (Int. J. Syst. Bacteriol., 43, 162-173 (1993)). Bacteria belonging to the genus Pantoea can encompass such bacteria re-classified into the genus Pantoea as described above.

[0148] A bacterium having an L-amino acid-producing ability (an ability to produce an L-amino acid) can mean a bacterium which can produce and secrete an L-amino acid in a medium when it is cultured in the medium. It can also mean a bacterium which can accumulate an objective L-amino acid in the medium in an amount not less than 0.5 g/L, and in another example not less than 1.0 g/L. The term "L-amino acid" encompasses L-alanine, L-arginine, L-asparagine, L-aspartic acid, L-cysteine, L-glutamic acid, L-glutamine, glycine, L-histidine, L-isoleucine, L-leucine, L-lysine, L-methionine, L-phenylalanine, L-proline, L-serine, L-threonine, L-tryptophan, L-tyrosine and L-valine.

[0149] As a parent strain which can be used, any of the L-amino acid-producing bacteria reported so far can be used, so long as a strain that can assimilate glycerol is chosen. Hereafter, L-amino acid-producing bacteria are described.

[0150] L-Threonine-Producing Bacteria

[0151] Examples of L-threonine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli TDH-6/pVIC40 (VKPM B-3996) (U.S. Pat. No. 5,175,107, U.S. Pat. No. 5,705,371), E. coli 472T23/pYN7 (ATCC 98081) (U.S. Pat. No. 5,631,157), E. coli NRRL-21593 (U.S. Pat. No. 5,939,307), E. coli FERM BP-3756 (U.S. Pat. No. 5,474,918), E. coli FERM BP-3519 and FERM BP-3520 (U.S. Pat. No. 5,376,538), E. coli MG442 (Gusyatiner et al., Genetika (in Russian), 14, 947-956 (1978)), E. coli VL643 and VL2055 (EP 1149911 A) and so forth.

[0152] The strain TDH-6 is deficient in the thrC gene, as well as being sucrose-assimilative, and the ilvA gene has a leaky mutation. This strain also has a mutation in the rhtA gene, which imparts resistance to high concentration of threonine or homoserine. The B-3996 strain harbors the plasmid pVIC40 obtained by inserting a thrA*BC operon containing a mutant thrA gene into a RSF1010-derived vector. This mutant thrA gene encodes aspartokinase homoserine dehydrogenase I which is substantially desensitized to feedback inhibition by threonine. The B-3996 strain was deposited on Nov. 19, 1987 at the All-Union Scientific Center of Antibiotics (Nagatinskaya Street 3-A, 117105 Moscow, Russia) under the accession number RIA 1867. The strain was also deposited at the Russian National Collection of Industrial Microorganisms (VKPM) on Apr. 7, 1987 under the accession number VKPM B-3996.

[0153] E. coli VKPM B-5318 (EP 0593792 B) can also be used. The B-5318 strain is prototrophic with regard to isoleucine, and in this strain, a temperature-sensitive lambda-phage Cl repressor and PR promoter replace the regulatory region of the threonine operon in the plasmid pVIC40. The strain VKPM B-5318 was deposited at the Russian National Collection of Industrial Microorganisms (VKPM) (1 Dorozhny proezd., 1 Moscow 117545, Russia) on May 3, 1990 under the accession number of VKPM B-5318.

[0154] The bacterium can be additionally modified so that expression of one or more of the following genes is increased: [0155] the mutant thrA gene which codes for aspartokinase-homoserine dehydrogenase I resistant to feed back inhibition by threonine; [0156] the thrB gene which codes for homoserine kinase; [0157] the thrC gene which codes for threonine synthase; [0158] the rhtA gene which codes for a putative transmembrane protein; [0159] the asd gene which codes for aspartate-.beta.-semialdehyde dehydrogenase; and [0160] the aspC gene which codes for aspartate aminotransferase (aspartate transaminase).

[0161] The thrA gene which encodes aspartokinase-homoserine dehydrogenase I of Escherichia coli has been elucidated (nucleotide numbers 337 to 2799, GenBank accession NC.sub.--000913.2, gi: 49175990). The thrA gene is located between the thrL and thrB genes on the chromosome of E. coli K-12. The thrB gene which encodes homoserine kinase of Escherichia coli has been elucidated (nucleotide numbers 2801 to 3733, GenBank accession NC.sub.--000913.2, gi: 49175990). The thrB gene is located between the thrA and thrC genes on the chromosome of E. coli K-12. The thrC gene which encodes threonine synthase of Escherichia coli has been elucidated (nucleotide numbers 3734 to 5020, GenBank accession NC.sub.--000913.2, gi: 49175990). The thrC gene is located between the thrB gene and the yaaX open reading frame on the chromosome of E. coli K-12. All three of these genes function as a single threonine operon. To increase expression of the threonine operon, the attenuator region which affects the transcription is desirably removed from the operon (WO2005/049808, WO2003/097839).

[0162] The mutant thrA gene which codes for aspartokinase-homoserine dehydrogenase I resistant to feed back inhibition by threonine as well as the thrB and thrC genes can be obtained as one operon from the well-known plasmid pVIC40 which is present in the threonine-producing E. coli strain VKPM B-3996. The plasmid pVIC40 is described in detail in U.S. Pat. No. 5,705,371.

[0163] The rhtA gene is present at 18 min on the E. coli chromosome close to the glnHPQ operon, which encodes components of the glutamine transport system. The rhtA gene is identical to ORF1 (ybiF gene, nucleotide numbers 764 to 1651, GenBank accession number AAA218541, gi:440181) and is located between the pexB and ompX genes. The unit expressing a protein encoded by the ORF1 has been designated rhtA gene (rht: resistance to homoserine and threonine). It has also been revealed that the rhtA23 mutation is an A-for-G substitution at position -1 with respect to the ATG start codon (ABSTRACTS of the 17th International Congress of Biochemistry and Molecular Biology in conjugation with Annual Meeting of the American Society for Biochemistry and Molecular Biology, San Francisco, Calif. Aug. 24-29, 1997, abstract No. 457, EP 1013765 A).

[0164] The asd gene of E. coli has already been elucidated (nucleotide numbers 3572511 to 3571408, GenBank Accession NC.sub.--000913.1, gi:16131307), and can be obtained by PCR (refer to White, T. J., Arnheim, N., and Erlich, H. A., Trends Genet., 5, 185-189 (1989)) utilizing primers prepared based on the nucleotide sequence of the gene. The asd genes of other microorganisms can be obtained in a similar manner.

[0165] The aspC gene of E. coli has also already been elucidated (nucleotide numbers 983742 to 984932, GenBank Accession NC.sub.--000913.1, gi:16128895), and can be obtained by PCR. The aspC genes of other microorganisms can be obtained in a similar manner.

[0166] L-Lysine-Producing Bacteria

[0167] Examples of L-lysine-producing bacteria belonging to the genus Escherichia include mutants having resistance to an L-lysine analogue. L-Lysine analogues inhibit growth of bacteria belonging to the genus Escherichia, but this inhibition is fully or partially desensitized when L-lysine is present in a medium. Examples of the L-lysine analogue include, but are not limited to, oxalysine, lysine hydroxamate, S-(2-aminoethyl)-L-cysteine (AEC), .gamma.-methyllysine, .alpha.-chlorocaprolactam and so forth. Mutants having resistance to these lysine analogues can be obtained by subjecting bacteria belonging to the genus Escherichia to a conventional artificial mutagenesis treatment. Specific examples of bacterial strains useful for producing L-lysine include Escherichia coli AJ11442 (FERM BP-1543, NRRL B-12185; see U.S. Pat. No. 4,346,170) and Escherichia coli VL611. In these microorganisms, feedback inhibition of aspartokinase by L-lysine is desensitized.

[0168] The WC196 strain can be used as an L-lysine-producing bacterium of Escherichia coli. This bacterial strain was bred by conferring AEC resistance to the W3110 strain, which was derived from Escherichia coli K-12. This strain was designated Escherichia coli AJ13069 and was deposited at the National Institute of Bioscience and Human-Technology, Agency of Industrial Science and Technology (currently National Institute of Advanced Industrial Science and Technology, International Patent Organism Depositary, Central 6, 1-1, Higashi 1-Chome, Tsukuba-shi, Ibaraki-ken, 305-8566, Japan) on Dec. 6, 1994 and assigned an accession number of FERM P-14690. Then, it was converted to an international deposit under the provisions of the Budapest Treaty on Sep. 29, 1995, and assigned an accession number of FERM BP-5252 (U.S. Pat. No. 5,827,698).

[0169] Examples of L-lysine-producing bacteria and parent strains which can be used to derive such bacteria also include strains in which expression of one or more genes encoding an L-lysine biosynthetic enzyme can be increased. Examples of such genes include, but are not limited to, dihydrodipicolinate synthase gene (dapA), aspartokinase gene (lysC), dihydrodipicolinate reductase gene (dapB), diaminopimelate decarboxylase gene (lysA), diaminopimelate dehydrogenase gene (ddh) (U.S. Pat. No. 6,040,160), phosphoenolpyrvate carboxylase gene (ppc), aspartate semialdehyde dehydrogenease gene (asd), and aspartase gene (aspA) (EP 1253195 A). In addition, the parent strains can have an increased level of expression of the gene involved in energy efficiency (cyo) (EP 1170376 A), the gene encoding nicotinamide nucleotide transhydrogenase (pntAB) (U.S. Pat. No. 5,830,716), the ybjE gene (WO2005/073390), the gene coding for glutamate dehydrogenase (gdhA, Gene, 23:199-209 (1983)), or combinations thereof. Abbreviations of the genes are indicated in the parentheses.

[0170] It is known that wild-type dihydrodipicolinate synthetase derived from Escherichia coli suffers from feedback inhibition by L-lysine, while wild-type aspartokinase from Escherichia coli suffers from suppression and feedback inhibition by L-lysine. Therefore, when the dapA and lysC genes are used, these genes are preferably mutant genes coding the enzymes that do not suffer from the feedback inhibition by L-lysine.

[0171] Examples of DNA encoding a mutant dihydrodipicolinate synthetase desensitized to feedback inhibition by L-lysine include a DNA encoding a protein which has the amino acid sequence of the enzyme in which the histidine at position 118 is replaced by tyrosine. Examples of DNA encoding a mutant aspartokinase desensitized to feedback inhibition by L-lysine include a DNA encoding an AKIII having the amino acid sequence in which the threonine at position 352, the glycine at position 323, and the methionine at position 318 are replaced by isoleucine, asparagine and isoleucine, respectively (U.S. Pat. No. 5,661,012 and U.S. Pat. No. 6,040,160). Such mutant DNAs can be obtained by site-specific mutagenesis using PCR or the like.

[0172] Wide host-range plasmids RSFD80, pCAB1, and pCABD2 are known as plasmids containing a mutant dapA gene encoding a mutant dihydrodipicolinate synthetase and a mutant lysC gene encoding a mutant aspartokinase (U.S. Pat. No. 6,040,160). Escherichia coli JM109 strain transformed with RSFD80 was named AJ12396 (U.S. Pat. No. 6,040,160), and the strain was deposited at the National Institute of Bioscience and Human-Technology, Agency of Industrial Science and Technology, Ministry of International Trade and Industry (currently, International Patent Organism Depositary, National Institute of Advanced Industrial Science and Technology) on Oct. 28, 1993 and assigned an accession number of FERM P-13936, and the deposit was then converted to an international deposit under the provisions of Budapest Treaty on Nov. 1, 1994 and assigned an accession number of FERM BP-4859. RSFD80 can be obtained from the AJ12396 strain by a known method.

[0173] Examples of L-lysine-producing bacteria and parent strains which can be used to derive such bacteria also include strains having decreased or eliminated activity of an enzyme that catalyzes a reaction for generating a compound other than L-lysine by branching off from the biosynthetic pathway of L-lysine. Examples of the enzymes that catalyze a reaction for generating a compound other than L-lysine by branching off from the biosynthetic pathway of L-lysine include homoserine dehydrogenase, lysine decarboxylase (U.S. Pat. No. 5,827,698), and the malic enzyme (WO2005/010175). In order to reduce or delete the lysine decarboxylase activity, it is preferable to reduce expression of both the cadA gene and ldcC gene coding for lysine decarboxylase (International Publication WO2006/038695).

[0174] L-Cysteine-Producing Bacteria

[0175] Examples of L-cysteine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli JM15 which is transformed with different cysE alleles coding for feedback-resistant serine acetyltransferases (U.S. Pat. No. 6,218,168, Russian Patent Application No. 2003121601); E. coli W3110 having over-expressed genes which encode proteins suitable for secreting substances toxic for cells (U.S. Pat. No. 5,972,663); E. coli strains having lowered cysteine desulfohydrase activity (Japanese Patent Laid-open No. 11-155571); and E. coli W3110 with increased activity of a positive transcriptional regulator for cysteine regulon encoded by the cysB gene (WO01/27307).

[0176] L-Leucine-Producing Bacteria

[0177] Examples of L-leucine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli strains resistant to leucine (for example, the strain 57 (VKPM B-7386, U.S. Pat. No. 6,124,121)) or leucine analogues including .beta.-2-thienylalanine, 3-hydroxyleucine, 4-azaleucine and 5,5,5-trifluoroleucine (Japanese Patent Publication (Kokoku) No. 62-34397 and Japanese Patent Laid-open No. 8-70879); E. coli strains obtained by a gene engineering method described in WO96/06926; and E. coli H-9068 (Japanese Patent Laid-open No. 8-70879).

[0178] The bacterium can be improved by enhancing expression of one or more genes involved in L-leucine biosynthesis. Examples of such genes include genes of the leuABCD operon, of which typical example is a mutant leuA gene coding for isopropyl malate synthase desensitized to feedback inhibition by L-leucine (U.S. Pat. No. 6,403,342). In addition, the bacterium can be improved by increasing expression of one or more genes coding for proteins which excrete L-amino acid from bacterial cells. Examples of such genes include the b2682 and b2683 genes (ygaZH genes) (EP 1239041 A2).

[0179] L-Histidine-Producing Bacteria

[0180] Examples of L-histidine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli strain 24 (VKPM B-5945, RU 2003677); E. coli strain 80 (VKPM B-7270, RU 2119536); E. coli NRRL B-12116 to B12121 (U.S. Pat. No. 4,388,405); E. coli H-9342 (FERM BP-6675) and H-9343 (FERM BP-6676) (U.S. Pat. No. 6,344,347); E. coli H-9341 (FERM BP-6674) (EP 1085087); and E. coli AI80/pFM201 (U.S. Pat. No. 6,258,554).

[0181] Examples of L-histidine-producing bacteria and parent strains which can be used to derive such bacteria also include strains in which expression of one or more genes encoding an L-histidine biosynthetic enzyme can be increased. Examples of such genes include ATP phosphoribosyl transferase gene (hisG), phosphoribosyl AMP cyclohydrolase gene (hisI), phosphoribosyl-ATP pyrophosphohydrolase gene (hisI), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gene (hisA), amidotransferase gene (hisH), histidinol phosphate aminotransferase gene (hisC), histidinol phosphatase gene (hisB), histidinol dehydrogenase gene (hisD), and so forth.

[0182] It is known that the L-histidine biosynthetic enzymes encoded by hisG and hisBHAFI are inhibited by L-histidine, and therefore L-histidine-producing ability can also be efficiently enhanced by introducing a mutation which confers resistance to the feedback inhibition into the ATP phosphoribosyl transferase gene (hisG) (Russian Patent Nos. 2003677 and 2119536).

[0183] Specific examples of strains having L-histidine-producing ability include E. coli FERM-P 5038 and 5048 which are introduced with a vector carrying a DNA encoding an L-histidine biosynthetic enzyme (Japanese Patent Laid-open No. 56-005099), E. coli strains introduced with a gene for amino acid-export (EP 1016710 A), E. coli 80 strain imparted with sulfaguanidine, DL-1,2,4-triazole-3-alanine, and streptomycin resistance (VKPM B-7270, Russian Patent No. 2119536), and so forth.

[0184] L-Glutamic Acid-Producing Bacteria

[0185] Examples of L-glutamic acid-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli VL334thrC.sup.+ (EP 1172433). E. coli VL334 (VKPM B-1641) is an L-isoleucine and L-threonine auxotrophic strain having mutations in thrC and ilvA genes (U.S. Pat. No. 4,278,765). A wild-type allele of the thrC gene was transferred by the method of general transduction using a bacteriophage P1 grown on the wild-type E. coli K12 strain (VKPM B-7) cells. As a result, an L-isoleucine auxotrophic L-glutamic acid-producing strain VL334thrC.sup.+ (VKPM B-8961) was obtained.

[0186] Examples of L-glutamic acid-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains in which expression of one or more genes encoding an L-glutamic acid biosynthetic enzyme can be increased. Examples of such genes include genes encoding glutamate dehydrogenase (gdhA), glutamine synthetase (glnA), glutamate synthetase (gitAB), isocitrate dehydrogenase (icdA), aconitate hydratase (acnA, acnB), citrate synthase (OA), phosphoenolpyruvate carboxylase (ppc), pyruvate dehydrogenase (aceEF, lpdA), pyruvate kinase (pykA, pykF), phosphoenolpyruvate synthase (ppsA), enolase (eno), phosphoglyceromutase (pgmA, pgmI), phosphoglycerate kinase (pgk), glyceraldehyde-3-phophate dehydrogenase (gapA), triose phosphate isomerase (tpiA), fructose bisphosphate aldolase (fbp), phosphofructokinase (pfkA, pfkB), glucose phosphate isomerase (pgi), and so forth.

[0187] Examples of strains modified to increase expression of the citrate synthetase gene, the phosphoenolpyruvate carboxylase gene, and/or the glutamate dehydrogenase gene include those disclosed in EP 1078989 A, EP 955368 A and EP 952221 A.

[0188] Examples of L-glutamic acid-producing bacteria and parent strains which can be used to derive such bacteria also include strains having decreased or eliminated activity of an enzyme that catalyzes synthesis of a compound other than L-glutamic acid by branching off from an L-glutamic acid biosynthesis pathway. Examples of such enzymes include isocitrate lyase (aceA), .alpha.-ketoglutarate dehydrogenase (sucA), phosphotransacetylase (pta), acetate kinase (ack), acetohydroxy acid synthase (ilvG), acetolactate synthase (ilvI), formate acetyltransferase (pfl), lactate dehydrogenase (ldh), glutamate decarboxylase (gadAB), and so forth. Bacteria belonging to the genus Escherichia deficient in .alpha.-ketoglutarate dehydrogenase activity or having reduced .alpha.-ketoglutarate dehydrogenase activity and methods for obtaining them are described in U.S. Pat. Nos. 5,378,616 and 5,573,945.

[0189] Specific examples of such strains include the following:

[0190] E. coli W3110sucA::Km.sup.r

[0191] E. coli AJ12624 (FERM BP-3853)

[0192] E. coli AJ12628 (FERM BP-3854)

[0193] E. coli AJ12949 (FERM BP-4881)

[0194] E. coli W3110sucA::Km.sup.r is a strain obtained by disrupting the .alpha.-ketoglutarate dehydrogenase gene (hereinafter also referred to as "sucA gene") of E. coli W3110. This strain is completely deficient in .alpha.-ketoglutarate dehydrogenase.

[0195] Other examples of L-glutamic acid-producing bacteria include those which belong to the genus Escherichia and have resistance to an aspartic acid antimetabolite. These strains may also be deficient in .alpha.-ketoglutarate dehydrogenase, and examples include, for example, E. coli AJ13199 (FERM BP-5807) (U.S. Pat. No. 5,908,768), FFRM P-12379) which additionally has a lowered L-glutamic acid decomposing ability (U.S. Pat. No. 5,393,671); AJ13138 (FERM BP-5565) (U.S. Pat. No. 6,110,714), and so forth.

[0196] Examples of L-glutamic acid-producing bacteria include mutant strains belonging to the genus Pantoea which are deficient in .alpha.-ketoglutarate dehydrogenase activity or have a decreased .alpha.-ketoglutarate dehydrogenase activity, and they can be obtained as described above. Such strains include Pantoea ananatis AJ13356 (U.S. Pat. No. 6,331,419). Pantoea ananatis AJ13356 was deposited at the National Institute of Bioscience and Human-Technology, Agency of Industrial Science and Technology (currently, National Institute of Advanced Industrial Science and Technology, International Patent Organism Depositary, Central 6, 1-1, Higashi 1-Chome, Tsukuba-shi, Ibaraki-ken, 305-8566, Japan) on Feb. 19, 1998 under an accession number of FERM P-16645. It was then converted to an international deposit under the provisions of Budapest Treaty on Jan. 11, 1999 and assigned an accession number of FERM BP-6616. Pantoea ananatis AJ13356 is deficient in .alpha.-ketoglutarate dehydrogenase activity as a result of disruption of the .alpha.KGDH-E1 subunit gene (sucA). This strain was identified as Enterobacter agglomerans when it was isolated and deposited as the Enterobacter agglomerans AJ13356. However, it was recently re-classified as Pantoea ananatis on the basis of nucleotide sequencing of 16S rRNA and so forth. Although AJ13356 was deposited at the aforementioned depository as Enterobacter agglomerans, it is described as Pantoea ananatis in this specification.

[0197] L-Phenylalanine-Producing Bacteria

[0198] Examples of L-phenylalanine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli AJ12739 (tyrA::Tn10, tyrR) (VKPM B-8197); E. coli HW 1089 (ATCC 55371) harboring the mutant pheA34 gene (U.S. Pat. No. 5,354,672); E. coli MWEC101-b (KR

[0199] 8903681); E. coli NRRL B-12141, NRRL B-12145, NRRL B-12146 and NRRL B-12147 (U.S. Pat. No. 4,407,952). As parent strains, E. coli K-12 [W3110 (tyrA)/pPHAB] (FERM BP-3566), E. coli K-12 [W3110 (tyrA)/pPHAD] (FERM BP-12659), E. coli K-12 [W3110 (tyrA)/pPHATerm] (FERM BP-12662) and E. coli K-12 [W3110 (tyrA)/pBR-aroG4, pACMAB] named as AJ12604 (FERM BP-3579) may also be used (EP 488424 B1). Furthermore, L-phenylalanine-producing bacteria belonging to the genus Escherichia with an enhanced activity of the protein encoded by the yedA gene or the yddG gene can also be used (U.S. Patent Published Application Nos. 2003/0148473 A1 and 2003/0157667 A1).

[0200] L-Tryptophan-Producing Bacteria

[0201] Examples of tryptophan-producing bacteria and parent strains which can be used to derive such bacteria, but are not limited to, strains belonging to the genus Escherichia, such as E. coli JP4735/pMU3028 (DSM10122) and JP6015/pMU91 (DSM10123) which are deficient in the tryptophanyl-tRNA synthetase encoded by mutant trpS gene (U.S. Pat. No. 5,756,345); E. coli SV164 (pGH5) having a serA allele encoding phosphoglycerate dehydrogenase free from feedback inhibition by serine and a trpE allele encoding anthranilate synthase free from feedback inhibition by tryptophan (U.S. Pat. No. 6,180,373); E. coli AGX17(pGX44) (NRRL B-12263) and AGX6(pGX50)aroP(NRRL B-12264) deficient in tryptophanase (U.S. Pat. No. 4,371,614); and E. coli AGX17/pGX50,pACKG4-pps in which phosphoenolpyruvate-producing ability is enhanced (WO97/08333, U.S. Pat. No. 6,319,696). L-Tryptophan-producing bacteria belonging to the genus Escherichia with an enhanced activity of the protein encoded by the yedA gene or the yddG gene may also be used (U.S. Patent Published Application Nos. 2003/0148473 A1 and 2003/0157667 A1).

[0202] Examples of L-tryptophan-producing bacteria and parent strains which can be used to derive such bacteria also include strains in which one or more activities of the enzymes anthranilate synthase (trpE), phosphoglycerate dehydrogenase (serA), and tryptophan synthase (trpAB) are increased. The anthranilate synthase and phosphoglycerate dehydrogenase both suffer from feedback inhibition by L-tryptophan and L-serine, and therefore a mutation desensitizing them to the feedback inhibition may be introduced into these enzymes. Specific examples of strains having such a mutation include E. coli SV164 which harbors desensitized anthranilate synthase and a transformant strain obtained by introducing the plasmid pGH5 (WO94/08031), which contains a mutant serA gene encoding feedback inhibition-desensitized phosphoglycerate dehydrogenase, into the E. coli SV164.

[0203] Examples of L-tryptophan-producing bacteria and parent strains which can be used to derive such bacteria also include strains into which the tryptophan operon containing a gene encoding inhibition-desensitized anthranilate synthase is introduced (Japanese Patent Laid-open Nos. 57-71397, 62-244382, U.S. Pat. No. 4,371,614). Moreover, L-tryptophan-producing ability may be imparted by increasing expression of a gene which encodes tryptophan synthase in the tryptophan operon (trpBA). The tryptophan synthase consists of .alpha. and .beta. subunits which are encoded by the trpA and trpB genes, respectively. In addition, L-tryptophan-producing ability can also be improved by increasing expression of the isocitrate lyase-malate synthase operon (WO2005/103275).

[0204] L-Proline-Producing Bacteria

[0205] Examples of L-proline-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli 702ilvA (VKPM B-8012) which is deficient in the ilvA gene and is able to produce L-proline (EP 1172433).

[0206] The bacterium can be improved by increasing expression of one or more genes involved in L-proline biosynthesis. Examples of such genes include the proB gene coding for glutamate kinase desensitized to feedback inhibition by L-proline (DE 3127361). In addition, the bacterium can be improved by increasing expression of one or more genes coding for proteins excreting L-amino acid from bacterial cells. Examples of such genes include the b2682 and b2683 genes (ygaZH genes) (EP 1239041 A2).

[0207] Examples of bacteria belonging to the genus Escherichia and having L-proline-producing ability include the following E. coli strains: NRRL B-12403 and NRRL B-12404 (British Patent No. 2075056), VKPM B-8012 (Russian Patent Application No. 2000124295), plasmid mutants described in German Patent No. 3127361, plasmid mutants described by Bloom F. R. et al. (The 15th Miami winter symposium, 1983, p. 34), and so forth.

[0208] L-Arginine-Producing Bacteria

[0209] Examples of L-arginine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains belonging to the genus Escherichia, such as E. coli strain 237 (VKPM B-7925) (U.S. Patent Published Application 2002/058315A1) and its derivative strains harboring mutant N-acetylglutamate synthase (Russian Patent Application No. 2001112869), E. coli strain 382 (VKPM B-7926) (EP 1170358 A1), and an arginine-producing strain into which argA gene encoding N-acetylglutamate synthetase is introduced (EP 1170361 A1).

[0210] Examples of L-arginine-producing bacteria and parent strains which can be used to derive such bacteria also include strains in which expression of one or more genes encoding an L-arginine biosynthetic enzyme can be increased. Examples of such genes include N-acetylglutamyl phosphate reductase gene (argC), ornithine acetyl transferase gene (argJ), N-acetylglutamate kinase gene (argB), acetylornithine transaminase gene (argD), ornithine carbamoyl transferase gene (argF), argininosuccinic acid synthetase gene (argG), argininosuccinic acid lyase gene (argH), and carbamoyl phosphate synthetase gene (carAB).

[0211] L-Valine-Producing Bacteria

[0212] Example of L-valine-producing bacteria and parent strains which can be used to derive such bacteria include, but are not limited to, strains which have been modified to overexpress the ilvGMEDA operon (U.S. Pat. No. 5,998,178). It is desirable to remove the region of the ilvGMEDA operon which is required for attenuation so that expression of the operon is not attenuated by produced L-valine. Further, the ilvA gene in the operon is desirably disrupted so that threonine deaminase activity is decreased.

[0213] Examples of L-valine-producing bacteria and parent strains which can be used to derive such bacteria also include mutants having a mutation of amino-acyl t-RNA synthetase (U.S. Pat. No. 5,658,766). For example, E. coli VL1970, which has a mutation in the ileS gene encoding isoleucine tRNA synthetase, can be used. E. coli VL1970 was deposited at the Russian National Collection of Industrial Microorganisms (VKPM) (1 Dorozhny Proezd, 1 Moscow 117545, Russia) on Jun. 24, 1988 under the accession number of VKPM B-4411.

[0214] Furthermore, mutants requiring lipoic acid for growth and/or lacking H.sup.+-ATPase (WO96/06926) can also be used as the parent strains.

[0215] L-Isoleucine-Producing Bacteria

[0216] Examples of L-isoleucine-producing bacteria and parent strains include, but are not limited to, mutants having resistance to 6-dimethylaminopurine (Japanese Patent Laid-open No. 5-304969 A), mutants having resistance to an isoleucine analogue such as thiaisoleucine and isoleucine hydroxamate, and such mutants further having resistance to DL-ethionine and/or arginine hydroxamate (Japanese Patent Laid-open No. 5-130882). In addition, recombinant strains transformed with genes encoding proteins involved in L-isoleucine biosynthesis, such as threonine deaminase and acetohydroxate synthase, can also be used as the parent strains (Japanese Patent Laid-open No. 2-458, FR 0356739, and U.S. Pat. No. 5,998,178).

EXAMPLES

Example 1

Construction of L-Lysine-Producing Bacterium with Enhanced Fructose-6-phosphate aldolase, glycerol dehydrogenase and dihydroxyacetone kinase activities

[0217] <1-1> Construction of Plasmid for dak1 Gene Expression

[0218] The total nucleotide sequence of Saccharomyces cerevisiae chromosome has already been elucidated (Science, 25 (1996)). On the basis of the nucleotide sequence of the dak1 gene reported in this literature, the synthetic oligonucleotide of SEQ ID NO: 14 was prepared as a 5' primer, and the synthetic oligonucleotide of SEQ ID NO: 15 was prepared as a 3' primer. PCR was performed by using these synthetic oligonucleotides and the chromosomal DNA of the Saccharomyces cerevisiae JCM7255 strain as a template. The PCR product was purified and ligated with the vector pMW119 (Takara Bio) digested with HindIII and SalI to construct a dak1 expression plasmid pMW-dak1. The JCM7255 strain is stored in the independent administrative agency, RIKEN, "Japan Collection of Microorganisms", 2-1, Hirosawa, Wako-shi, Saitama-ken.

[0219] <1-2> Construction of Glycerol Dehydrogenase Activity-Improved Strain

[0220] A WC196.DELTA.cadA.DELTA.ldcC strain modified to have the structure shown in SEQ ID NO: 11 was constructed. For the construction of the strain having this structure, the sequence of SEQ ID NO: 9 (PCR product) was used. In the sequence of SEQ ID NO: 9, the sequence of the nucleotide numbers 1 to 172 is the attR sequence of .lamda. phage, the sequence of the nucleotide numbers 324 to 983 is a chloramphenicol resistance gene (cat), the sequence of the nucleotide numbers 1540 to 1653 is the attL sequence of .lamda. phage, and the sequence of the nucleotide numbers 1654 to 1733 is the tacM promoter.

[0221] The tacM promoter (SEQ ID NO: 10) can be constructed by replacing the TTGACA sequence of the tac promoter (Gene, 25 (2-3), 167-178 (1983)) at the -35 region with TTCACA. The sequence of SEQ ID NO: 9 can be constructed by referring to the construction of pMW118-attL-Cm-attR (WO2005/010175).

[0222] The sequence of SEQ ID NO: 9 as a template was amplified by PCR using the primers of SEQ ID NOS: 12 and 13, and this amplification product was inserted into chromosome of the WC196.DELTA.cadA.DELTA.ldcC strain (refer to International Publication WO2006/038695) by the .lamda.-RED method (WO2005/010175) to construct a strain in which the promoter sequence upstream of the gldA was replaced. In this way, a strain with improved glycerol dehydrogenase activity, WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm strain, was obtained.

[0223] <1-3> Construction of L-Lysine-Producing Bacterium with Enhanced Fructose-6-Phosphate Aldolase and Glycerol Dehydrogenase Activities

[0224] A WC196.DELTA.cadA.DELTA.ldcC strain modified to have the structure shown in SEQ ID NO: 92 was constructed. For construction of the strain having this structure, the sequence of SEQ ID NO: 9 (PCR product) was used. In the sequence of SEQ ID NO: 9, the sequence of the nucleotide numbers 1 to 172 is the attR sequence of .lamda. phage, the sequence of the nucleotide numbers 324 to 983 is a chloramphenicol resistance gene (cat), the sequence of the nucleotide numbers 1540 to 1653 is the attL sequence of .lamda. phage, and the sequence of the nucleotide numbers 1654 to 1733 is the tacM promoter.

[0225] The tacM promoter (SEQ ID NO: 10) can be constructed by replacing the TTGACA sequence of the tac promoter (Gene, 25 (2-3), 167-178 (1983)) at the -35 region with TTCACA. The sequence of SEQ ID NO: 9 can be constructed by referring to the construction of pMW118-attL-Cm-attR (WO2005/010175).

[0226] The sequence of SEQ ID NO: 9 as a template was amplified by PCR using the primers of SEQ ID NOS: 93 and 94, and this amplification product was inserted into chromosome of the WC196.DELTA.cadA.DELTA.ldcC strain (refer to International Publication WO2006/038695) by the .lamda.-RED method (WO2005/010175) to construct a strain in which the promoter sequence upstream of the fsaB-gldA operon was replaced. In this way, a strain with improved fructose-6-phosphate aldolase and glycerol dehydrogenase activities, WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm strain, was obtained.

[0227] <1-4> Construction of L-Lysine-Producing Bacteria with Enhanced Fructose-6-Phosphate Aldolase, Glycerol Dehydrogenase and Dihydroxyacetone Kinase Activities

[0228] The WC196.DELTA.cadA.DELTA.ldcC strain (refer to International Publication WO2006/038695), the WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm strain and the WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm strain were transformed with the plasmid pCABD2 for Lys production carrying dapA, dapB and lysC genes (International Publication WO01/53459) in a conventional manner to obtain WC196.DELTA.cadA.DELTA.ldcC/pCABD2 strain, WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm/pCABD2 strain, and WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm/pCABD2 strain. Furthermore, the WC196.DELTA.cadA.DELTA.ldcC/pCABD2 strain, the WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm/pCABD2 strain and the WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm/pCABD2 strain were transformed with the dak1 expression plasmid pMW-dak1 in a conventional manner to obtain WC196.DELTA.cadA.DELTA.ldcC/pCABD2,pMW-dak1 strain, WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm/pCABD2,pMW-dak1 strain and WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm/pCABD2,pMW-dak1 strain.

[0229] These strains were each cultured in L medium containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin at 37.degree. C. until the final OD600 became about 0.6, then a 40% glycerol solution in a volume equal to the culture medium was added to each culture medium, and the mixture was stirred, then divided into appropriate volumes, and stored at -80.degree. C. These are called glycerol stocks.

Example 2

Evaluation of L-Lysine-Producing Bacteria with Enhanced Fructose-6-Phosphate Aldolase, Glycerol Dehydrogenase and Dihydroxyacetone Kinase Activities

[0230] The aforementioned glycerol stocks of the strains were thawed, 100 .mu.L of each stock was uniformly applied to an L plate containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin, and culture was performed at 37.degree. C. for 24 hours. The obtained cells on the plate were suspended in 1 ml of physiological saline, the suspension was inoculated in a volume V obtained by dividing a constant 50 with absorbance at 600 nm (n) of the suspension diluted 101 times (V=50/n) into 20 mL of a fermentation medium containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin contained in a 500-mL Sakaguchi flask, and culture was performed at 37.degree. C. for 48 hours on a reciprocally shaking culture machine. After the culture, amount of lysine accumulated in the medium was measured by a known method (Biotec Analyzer AS210, SAKURA SEIKI).

[0231] The composition of the fermentation medium is shown below (unit: g/L).

TABLE-US-00005 Glycerol 40 (NH.sub.4).sub.2SO.sub.4 24 K.sub.2HPO.sub.4 1.0 MgSO.sub.4 7H.sub.2O 1.0 FeSO.sub.4 7H.sub.2O 0.01 MnSO.sub.4 5H.sub.2O 0.01 Yeast extract 2.0 To final volume of 1 L

[0232] The medium was adjusted to pH 7.0 with KOH, and autoclaved at 115.degree. C. for 10 minutes, provided that glycerol and MgSO.sub.4.7H.sub.2O were separately sterilized, and 30 g/L of CaCO.sub.3 of Japanese Pharmacopoeia subjected to hot air sterilization at 180.degree. C. for 2 hours was added.

[0233] As antibiotics, 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin were added. The culture was performed under the conditions of a temperature of 37.degree. C. and stifling at 115 rpm for 48 hours.

[0234] The results are shown in Table 5 (OD means absorbance at 600 nm representing cell amount, Lys (g/L) means the amount of L-lysine accumulated in flask, and yield (%) means yield of L-lysine based on the substrate). Whereas the strain in which only glycerol dehydrogenase was enhanced, the strain in which only dihydroxyacetone kinase was enhanced, and the strain in which fructose-6-phosphate aldolase and glycerol dehydrogenase were enhanced did not show change of yield and productivity compared with the non-modified strain, the WC196.DELTA.cadA.DELTA.ldcCPtacMgldA::Cm/pCABD2,pMW-dak1 strain in which both glycerol dehydrogenase and dihydroxyacetone kinase using ATP as a phosphate donor were enhanced accumulated a larger amount of L-lysine compared with the other strains. Further, the WC196.DELTA.cadA.DELTA.ldcCPtacM fsaB-gldA::Cm/pCABD2,pMW-dak1 strain in which fructose-6-phosphate aldolase, glycerol dehydrogenase and dihydroxyacetone kinase using ATP as a phosphate donor were enhanced accumulated a further larger amount of L-lysine.

TABLE-US-00006 TABLE 5 Table 5: L-Lysine accumulation of strains with enhanced fructose-6-phosphate aldolase (fsaB), glycerol dehydrogenase (gldA) and dihydroxyacetone kinase (dakl) activities OD Lys (g/L) Yield (%) WC196LC pCABD2 -- 16.7 14.7 36.8 WC196LC pCABD2 pMW-dak1 14.3 14.8 36.9 WC196LCPtacMgldA pCABD2 -- 18.1 14.7 36.8 WC196LCPtacMfsaB-gldA pCABD2 -- 18.5 14.3 35.8 WC196LCPtacMgldA pCABD2 pMW-dak1 15.3 15.3 38.1 WC196LCPtacMfsaB-gldA pCABD2 pMW-dak1 14.0 16.9 42.1 In the names of strains mentioned in the table, "LC" is an abbreviation of ".DELTA.cadA.DELTA.ldcC", and "::Cm" is omitted.

Example 3

Construction of L-Threonine-Producing Bacteria with Enhanced Glycerol Dehydrogenase and Dihydroxyacetone Kinase Activities

[0235] <3-1> Construction Of Glycerol Dehydrogenase Activity-Improved Strain

[0236] B5318 strains modified to have the structures shown in SEQ ID NOS: 90 and 91 were constructed. For construction of the strains having these structures, sequences of SEQ ID NOS: 88 and 89 (PCR products) were used. In the sequences of SEQ ID NOS: 88 and 89, the sequences of the nucleotide numbers 1 to 72 are the attR sequences of .lamda. phage, the sequences of the nucleotide numbers 324 to 983 are chloramphenicol resistance genes (cat), the sequences of the nucleotide numbers 1540 to 1653 are the attL sequences of .lamda. phage, and the sequences of the nucleotide numbers 1654 to 1733 are the tacM2 and tacM3 promoters.

[0237] The tacM2 and tacM3 promoters are constitutive promoters which can be constructed by replacing the TTGACA sequence of the tac promoter (Gene, 25 (2-3), 167-178 (1983)) at the -35 region with TGTACA and TTGGCA (Molecular Biology 39 (5) 719-726 (2005)). The sequences of SEQ ID NOS: 88 and 89 can be constructed by referring to the construction of pMW118-attL-Cm-attR (WO2005/010175).

[0238] The sequences of SEQ ID NOS: 88 and 89 as templates were amplified by PCR using the primers of SEQ ID NOS: 12 and 13, and these amplification products were each inserted into chromosome of the B5318 strain (VKPM B-5318) by the .lamda.-RED method (WO2005/010175) to obtain strains in which the promoter sequence upstream of the gldA was replaced. In this way, strains with improved glycerol dehydrogenase activity, B5318PtacM2gldA::Cm strain and B5318PtacM3gldA::Cm strain, were obtained.

[0239] <1-3> Construction of L-Threonine-Producing Bacteria with Enhanced Glycerol Dehydrogenase and Dihydroxyacetone Kinase Activities

[0240] The B5318PtacM2gldA::Cm strain and the B5318PtacM3gldA::Cm strain were transformed with the dak1 expression plasmid pMW-dak1 in a conventional manner to obtain B5318PtacM2gldA::Cm/pMW-dak1 strain and B5318PtacM3gldA::Cm/pMW-dak1 strain.

[0241] These strains were each cultured in L medium containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin at 37.degree. C. until the final OD600 became about 0.6, then a 40% glycerol solution in a volume equal to the culture medium was added to each culture medium, and the mixture was stirred, then divided into appropriate volumes, and stored at -80.degree. C. These are called glycerol stocks.

Example 4

Evaluation of L-Threonine-Producing Bacteria with Enhanced Glycerol Dehydrogenase and Dihydroxyacetone Kinase Activities

[0242] The aforementioned glycerol stocks of the strains were thawed, 100 .mu.L of each stock was uniformly applied to an L plate containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin, and culture was performed at 37.degree. C. for 24 hours. The obtained cells on the plate were suspended in 1 ml of physiological saline, the suspension was inoculated in a volume (V) obtained by dividing a constant 50 with absorbance at 600 nm (n) of the suspension diluted 101 times (V=50/n) into 20 mL of a fermentation medium containing 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin contained in a 500-mL conical flask with baffle, and culture was performed at 40.degree. C. for 24 hours on a rotary culture machine. After the culture, amount of threonine accumulated in the medium was measured by a known method (Hitachi Liquid Chromatography ODS-2 Column).

[0243] The composition of the fermentation medium is shown below (unit: g/L).

TABLE-US-00007 Glycerol 40 (NH.sub.4).sub.2SO.sub.4 24 K.sub.2HPO.sub.4 1.0 MgSO.sub.4 7H.sub.2O 1.0 FeSO.sub.4 7H.sub.2O 0.01 MnSO.sub.4 5H.sub.2O 0.01 Yeast extract 2.0 To final volume of 1 L

[0244] The medium was adjusted to pH 7.0 with KOH, and autoclaved at 115.degree. C. for 10 minutes, provided that glycerol and MgSO.sub.4. 7H.sub.2O were separately sterilized, and 30 g/L of CaCO.sub.3 of Japanese Pharmacopoeia subjected to hot air sterilization at 180.degree. C. for 2 hours was added.

[0245] As antibiotics, 20 mg/L of streptomycin or 20 mg/L of streptomycin and 50 mg/L of ampicillin were added. The culture was performed under the conditions of a temperature of 40.degree. C. and stifling at 144 rpm for 24 hours.

[0246] The results are shown in Table 6 (OD means absorbance at 600 nm representing cell amount, Thr (g/L) means amount of L-threonine accumulated in flask, and yield (%) means yield of L-threonine based on the substrate). Whereas the strain in which only glycerol dehydrogenase was enhanced did not show change of yield and productivity compared with the non-modified strain, the B5318PtacM2gldA::Cm/pMW-dak1 strain and the B5318PtacM3gldA::Cm/pMW-dak1 strain in which both glycerol dehydrogenase and dihydroxyacetone kinase using ATP as a phosphate donor were enhanced accumulated a larger amount of L-threonine compared with the other strains.

TABLE-US-00008 TABLE 6 Table 6: L-Threonine accumulation of strains with enhanced glycerol dehydrogenase (gldA) and dihydroxyacetone kinase (dak1) activities OD600 Thr (g/L) Yield (%) B5318 -- -- 22.5 12.5 30.9 B5318 Ptac M2 gldA -- 21.5 11.9 29.4 B5318 Ptac M2 gldA pMW-dak 21.1 13.2 32.6 B5318 Ptac M3 gldA -- 23.1 12.3 30.4 B5318 Ptac M3 gldA pMW-dak 22.3 13.3 32.9 In the names of strains mentioned in the table, "pMW-dak1" is abbreviated as "pMW-dak", and "::Cm" is omitted.

[0247] Explanation of Sequence Listing:

[0248] SEQ ID NO: 1: gldA gene sequence of Escherichia coli (1104 bp)

[0249] SEQ ID NO: 2: GldA amino acid sequence of Escherichia coli (367 AA)

[0250] SEQ ID NO: 3: dakA1 gene sequence of Saccharomyces cerevisiae (1755 bp)

[0251] SEQ ID NO: 4: DakA amino acid sequence of Saccharomyces cerevisiae (584 AA)

[0252] SEQ ID NO: 5: dhbK1 gene sequence of Agrobacterium tumefaciens (1695 bp)

[0253] SEQ ID NO: 6: Dhbk1 amino acid sequence of Agrobacterium tumefaciens (564 AA)

[0254] SEQ ID NO: 7: dhaK gene sequence of Citrobacter freundii (1659 bp)

[0255] SEQ ID NO: 8: DhaK amino acid sequence of Citrobacter freundii (552 AA)

[0256] SEQ ID NO: 9: attR-cat-attL-ptacM-SD-spacer sequence (1740 bp)

[0257] SEQ ID NO: 10: tacM promoter (80 bp)

[0258] SEQ ID NO: 11: PtacMgldA::Cm sequence

[0259] SEQ ID NO: 12: atL-Ptac-gldA (PCR primer for enhancing gldA on chromosome)

[0260] SEQ ID NO: 13: atR-Ptac-fsaB1 (PCR primer for enhancing gldA on chromosome)

[0261] SEQ ID NO: 14: pMW-dak1F (primer for dakA cloning)

[0262] SEQ ID NO: 15: pMW-dak1R (primer for dakA cloning)

[0263] SEQ ID NO: 16: glpF gene sequence of Escherichia coli (846 bp)

[0264] SEQ ID NO: 17: GlpF amino acid sequence of Escherichia coli (281 AA)

[0265] SEQ ID NO: 18: tpiA gene sequence of Escherichia coli (768 bp)

[0266] SEQ ID NO: 19: TpiA amino acid sequence of Escherichia coli (255 AA)

[0267] SEQ ID NO: 20: fbaA gene sequence of Escherichia coli (1080 bp)

[0268] SEQ ID NO: 21: FbaA amino acid sequence of Escherichia coli (359 AA)

[0269] SEQ ID NO: 22: glpX gene sequence of Escherichia coli (1011 bp)

[0270] SEQ ID NO: 23: GlpX amino acid sequence of Escherichia coli (336 AA)

[0271] SEQ ID NO: 24: glpK gene sequence of Escherichia coli (1509 bp)

[0272] SEQ ID NO: 25: GlpK amino acid sequence of Escherichia coli (502 AA)

[0273] SEQ ID NO: 26: glpA gene sequence of Escherichia coli (1629 bp)

[0274] SEQ ID NO: 27: GlpA amino acid sequence of Escherichia coli (542 AA)

[0275] SEQ ID NO: 28: glpB gene sequence of Escherichia coli (1260 bp)

[0276] SEQ ID NO: 29: GlpB amino acid sequence of Escherichia coli (419 AA)

[0277] SEQ ID NO: 30: glpC gene sequence of Escherichia coli (1191 bp)

[0278] SEQ ID NO: 31: GlpC amino acid sequence of Escherichia coli (396 AA)

[0279] SEQ ID NO: 32: glpD gene sequence of Escherichia coli (1506 bp)

[0280] SEQ ID NO: 33: GlpD amino acid sequence of Escherichia coli (501 AA)

[0281] SEQ ID NO: 34: dhaK gene sequence of Escherichia coli (1071 bp)

[0282] SEQ ID NO: 35: DhaK amino acid sequence of Escherichia coli (356 AA)

[0283] SEQ ID NO: 36: dhaL gene sequence of Escherichia coli (633 bp)

[0284] SEQ ID NO: 37: DhaL amino acid sequence of Escherichia coli (210 AA)

[0285] SEQ ID NO: 38: dhaM gene sequence of Escherichia coli (1419 bp)

[0286] SEQ ID NO: 39: DhaM amino acid sequence of Escherichia coli (472 AA)

[0287] SEQ ID NO: 40: Dihydroxyacetone kinase gene of Schizosaccharomyces pombe (1776 bp)

[0288] SEQ ID NO: 41: Dihydroxyacetone kinase of Schizosaccharomyces pombe (591 AA)

[0289] SEQ ID NO: 42: Dihydroxyacetone kinase gene of Pichia angusta (1830 bp)

[0290] SEQ ID NO: 43: Dihydroxyacetone kinase of Pichia angusta (609 AA)

[0291] SEQ ID NO: 44: Dihydroxyacetone kinase gene of Pichia pastoris (1827 bp)

[0292] SEQ ID NO: 45: Dihydroxyacetone kinase of Pichia pastoris (608 AA)

[0293] SEQ ID NO: 46: Dihydroxyacetone kinase gene of Debaryomyces hansenii (1824 bp)

[0294] SEQ ID NO: 47: Dihydroxyacetone kinase of Debaryomyces hansenii (607 AA)

[0295] SEQ ID NO: 48: Dihydroxyacetone kinase gene of Escherichia blattae (1752 bp)

[0296] SEQ ID NO: 49: Dihydroxyacetone kinase of Escherichia blattae (583 AA)

[0297] SEQ ID NO: 50: Dihydroxyacetone kinase gene of Enterobacter sp. 638 (1647 bp)

[0298] SEQ ID NO: 51: Dihydroxyacetone kinase of Enterobacter sp. 638 (548 AA)

[0299] SEQ ID NO: 52: Dihydroxyacetone kinase gene of Psychromonas sp. CNPT3 (1695 bp)

[0300] SEQ ID NO: 53: Dihydroxyacetone kinase of Psychromonas sp. CNPT3 (564 AA)

[0301] SEQ ID NO: 54: Dihydroxyacetone kinase gene of Stappia aggregata (1647 bp)

[0302] SEQ ID NO: 55: Dihydroxyacetone kinase of Stappia aggregata (548 AA)

[0303] SEQ ID NO: 56: Dihydroxyacetone kinase gene of Rhizobium leguminosarum bv. viciae 3841 (1641 bp)

[0304] SEQ ID NO: 57: Dihydroxyacetone kinase of Rhizobium leguminosarum bv. viciae 3841 (546 AA)

[0305] SEQ ID NO: 58: Dihydroxyacetone kinase gene of Myxococcus xanthus DK 1622 (1701 bp)

[0306] SEQ ID NO: 59: Dihydroxyacetone kinase of Myxococcus xanthus DK 1622 (566 AA)

[0307] SEQ ID NO: 60: Dihydroxyacetone kinase gene of Burkholderia sp. 383 (1701 bp)

[0308] SEQ ID NO: 61: Dihydroxyacetone kinase of Burkholderia sp. 383 (566 AA)

[0309] SEQ ID NO: 62: Dihydroxyacetone kinase gene of Burkholderia thailandensis E264 (1704 bp)

[0310] SEQ ID NO: 63: Dihydroxyacetone kinase of Burkholderia thailandensis E264 (567 AA)

[0311] SEQ ID NO: 64: Dihydroxyacetone kinase gene of Burkholderia multivorans ATCC 17616 (1851 bp)

[0312] SEQ ID NO: 65: Dihydroxyacetone kinase of Burkholderia multivorans ATCC 17616 (616 AA)

[0313] SEQ ID NO: 66: dhaR gene of Escherichia coli (1920 bp)

[0314] SEQ ID NO: 67: DhaR amino acid sequence of Escherichia coli (639 AA)

[0315] SEQ ID NO: 68: fsaA gene of Escherichia coli (663 bp)

[0316] SEQ ID NO: 69: FsaA amino acid sequence of Escherichia coli (220 AA)

[0317] SEQ ID NO: 70: fsaB gene of Escherichia coli (663 bp)

[0318] SEQ ID NO: 71: FsaB amino acid sequence of Escherichia coli (220 AA)

[0319] SEQ ID NO: 72: fbaB gene of Escherichia coli (1053 bp)

[0320] SEQ ID NO: 73: FbaB amino acid sequence of Escherichia coli (350 AA)

[0321] SEQ ID NO: 74: gldA gene of Shigella dysenteriae Sd197 (1143 bp)

[0322] SEQ ID NO: 75: GldA amino acid sequence of Shigella dysenteriae Sd197 (380 AA)

[0323] SEQ ID NO: 76: gldA gene of Salmonella typhimurium LT2 (1104 bp)

[0324] SEQ ID NO: 77: GldA amino acid sequence of Salmonella typhimurium LT2 (367 AA)

[0325] SEQ ID NO: 78: gldA gene of Pseudomonas putida (1098 bp)

[0326] SEQ ID NO: 79: GldA amino acid sequence of Pseudomonas putida (365 AA)

[0327] SEQ ID NO: 80: gldA gene of Bacillus coagulans 36D1 (1104 bp)

[0328] SEQ ID NO: 81: GldA amino acid sequence of Bacillus coagulans 36D1 (367 AA)

[0329] SEQ ID NO: 82: fbp gene of Escherichia coli (999 bp)

[0330] SEQ ID NO: 83: Fbp amino acid sequence of Escherichia coli (322 AA)

[0331] SEQ ID NO: 84: ybhA gene of Escherichia coli (819 bp)

[0332] SEQ ID NO: 85: YbhA amino acid sequence of Escherichia coli (272 AA)

[0333] SEQ ID NO: 86: ptsI gene of Escherichia coli (1782 bp)

[0334] SEQ ID NO: 87: PtsI amino acid sequence of Escherichia coli (575 AA)

[0335] SEQ ID NO: 88: attR-cat-attL-PtacM2-SD-spacer sequence

[0336] SEQ ID NO: 89: attR-cat-attL-PtacM3-SD-spacer sequence

[0337] SEQ ID NO: 90: PtacM2gldA::Cm sequence

[0338] SEQ ID NO: 91: PtacM3gldA::Cm sequence

[0339] SEQ ID NO: 92: PtacM fsaB-gldA::Cm sequence

[0340] SEQ ID NO: 93: atL-Ptac-fsaB (PCR primer for enhancing fsaB+gldA on chromosome)

[0341] SEQ ID NO: 94: atR-Ptac-fsaB (PCR primer for enhancing fsaB+gldA on chromosome)

INDUSTRIAL APPLICABILITY

[0342] By using the microorganism of the present invention, efficient production of an L-amino acid from glycerol by fermentation is enabled.

[0343] While the invention has been described in detail with reference to exemplary embodiments thereof, it will be apparent to one skilled in the art that various changes can be made, and equivalents employed, without departing from the scope of the invention. Each of the aforementioned documents is incorporated by reference herein in its entirety.

Sequence CWU 1

1

9411104DNAEscherichia coliCDS(1)..(1104) 1atg gac cgc att att caa tca ccg ggt aaa tac atc cag ggc gct gat 48Met Asp Arg Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asp 1 5 10 15 gtg att aat cgt ctg ggc gaa tac ctg aag ccg ctg gca gaa cgc tgg 96Val Ile Asn Arg Leu Gly Glu Tyr Leu Lys Pro Leu Ala Glu Arg Trp 20 25 30 tta gtg gtg ggt gac aaa ttt gtt tta ggt ttt gct caa tcc act gtc 144Leu Val Val Gly Asp Lys Phe Val Leu Gly Phe Ala Gln Ser Thr Val 35 40 45 gag aaa agc ttt aaa gat gct gga ctg gta gta gaa att gcg ccg ttt 192Glu Lys Ser Phe Lys Asp Ala Gly Leu Val Val Glu Ile Ala Pro Phe 50 55 60 ggc ggt gaa tgt tcg caa aat gag atc gac cgt ctg cgt ggc atc gcg 240Gly Gly Glu Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Gly Ile Ala 65 70 75 80 gag act gcg cag tgt ggc gca att ctc ggt atc ggt ggc gga aaa acc 288Glu Thr Ala Gln Cys Gly Ala Ile Leu Gly Ile Gly Gly Gly Lys Thr 85 90 95 ctc gat act gcc aaa gca ctg gca cat ttc atg ggt gtt ccg gta gcg 336Leu Asp Thr Ala Lys Ala Leu Ala His Phe Met Gly Val Pro Val Ala 100 105 110 atc gca ccg act atc gcc tct acc gat gca ccg tgc agc gca ttg tct 384Ile Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 gtt atc tac acc gat gag ggt gag ttt gac cgc tat ctg ctg ttg cca 432Val Ile Tyr Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro 130 135 140 aat aac ccg aat atg gtc att gtc gac acc aaa atc gtc gct ggc gca 480Asn Asn Pro Asn Met Val Ile Val Asp Thr Lys Ile Val Ala Gly Ala 145 150 155 160 cct gca cgt ctg tta gcg gcg ggt atc ggc gat gcg ctg gca acc tgg 528Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 ttt gaa gcg cgt gcc tgc tct cgt agc ggc gcg acc acc atg gcg ggc 576Phe Glu Ala Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly 180 185 190 ggc aag tgc acc cag gct gcg ctg gca ctg gct gaa ctg tgc tac aac 624Gly Lys Cys Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn 195 200 205 acc ctg ctg gaa gaa ggc gaa aaa gcg atg ctt gct gcc gaa cag cat 672Thr Leu Leu Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His 210 215 220 gta gtg act ccg gcg ctg gag cgc gtg att gaa gcg aac acc tat ttg 720Val Val Thr Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 agc ggt gtt ggt ttt gaa agt ggt ggt ctg gct gcg gcg cac gca gtg 768Ser Gly Val Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Val 245 250 255 cat aac ggc ctg acc gct atc ccg gac gcg cat cac tat tat cac ggt 816His Asn Gly Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly 260 265 270 gaa aaa gtg gca ttc ggt acg ctg acg cag ctg gtt ctg gaa aat gcg 864Glu Lys Val Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala 275 280 285 ccg gtg gag gaa atc gaa acc gta gct gcc ctt agc cat gcg gta ggt 912Pro Val Glu Glu Ile Glu Thr Val Ala Ala Leu Ser His Ala Val Gly 290 295 300 ttg cca ata act ctc gct caa ctg gat att aaa gaa gat gtc ccg gcg 960Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Lys Glu Asp Val Pro Ala 305 310 315 320 aaa atg cga att gtg gca gaa gcg gca tgt gca gaa ggt gaa acc att 1008Lys Met Arg Ile Val Ala Glu Ala Ala Cys Ala Glu Gly Glu Thr Ile 325 330 335 cac aac atg cct ggc ggc gcg acg cca gat cag gtt tac gcc gct ctg 1056His Asn Met Pro Gly Gly Ala Thr Pro Asp Gln Val Tyr Ala Ala Leu 340 345 350 ctg gta gcc gac cag tac ggt cag cgt ttc ctg caa gag tgg gaa taa 1104Leu Val Ala Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 355 360 365 2367PRTEscherichia coli 2Met Asp Arg Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asp 1 5 10 15 Val Ile Asn Arg Leu Gly Glu Tyr Leu Lys Pro Leu Ala Glu Arg Trp 20 25 30 Leu Val Val Gly Asp Lys Phe Val Leu Gly Phe Ala Gln Ser Thr Val 35 40 45 Glu Lys Ser Phe Lys Asp Ala Gly Leu Val Val Glu Ile Ala Pro Phe 50 55 60 Gly Gly Glu Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Gly Ile Ala 65 70 75 80 Glu Thr Ala Gln Cys Gly Ala Ile Leu Gly Ile Gly Gly Gly Lys Thr 85 90 95 Leu Asp Thr Ala Lys Ala Leu Ala His Phe Met Gly Val Pro Val Ala 100 105 110 Ile Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 Val Ile Tyr Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro 130 135 140 Asn Asn Pro Asn Met Val Ile Val Asp Thr Lys Ile Val Ala Gly Ala 145 150 155 160 Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 Phe Glu Ala Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly 180 185 190 Gly Lys Cys Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn 195 200 205 Thr Leu Leu Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His 210 215 220 Val Val Thr Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 Ser Gly Val Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Val 245 250 255 His Asn Gly Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly 260 265 270 Glu Lys Val Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala 275 280 285 Pro Val Glu Glu Ile Glu Thr Val Ala Ala Leu Ser His Ala Val Gly 290 295 300 Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Lys Glu Asp Val Pro Ala 305 310 315 320 Lys Met Arg Ile Val Ala Glu Ala Ala Cys Ala Glu Gly Glu Thr Ile 325 330 335 His Asn Met Pro Gly Gly Ala Thr Pro Asp Gln Val Tyr Ala Ala Leu 340 345 350 Leu Val Ala Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 355 360 365 31755DNASaccharomyces cerevisiaeCDS(1)..(1755) 3atg tcc gct aaa tcg ttt gaa gtc aca gat cca gtc aat tca agt ctc 48Met Ser Ala Lys Ser Phe Glu Val Thr Asp Pro Val Asn Ser Ser Leu 1 5 10 15 aaa ggg ttt gcc ctt gct aac ccc tcc att acg ctg gtc cct gaa gaa 96Lys Gly Phe Ala Leu Ala Asn Pro Ser Ile Thr Leu Val Pro Glu Glu 20 25 30 aaa att ctc ttc aga aag acc gat tcc gac aag atc gca tta att tct 144Lys Ile Leu Phe Arg Lys Thr Asp Ser Asp Lys Ile Ala Leu Ile Ser 35 40 45 ggt ggt ggt agt gga cat gaa cct aca cac gcc ggt ttc att ggt aag 192Gly Gly Gly Ser Gly His Glu Pro Thr His Ala Gly Phe Ile Gly Lys 50 55 60 ggt atg ttg agt ggc gcc gtg gtt ggc gaa att ttt gca tcc cct tca 240Gly Met Leu Ser Gly Ala Val Val Gly Glu Ile Phe Ala Ser Pro Ser 65 70 75 80 aca aaa cag att tta aat gca atc cgt tta gtc aat gaa aat gcg tct 288Thr Lys Gln Ile Leu Asn Ala Ile Arg Leu Val Asn Glu Asn Ala Ser 85 90 95 ggc gtt tta ttg att gtg aag aac tac aca ggt gat gtt ttg cat ttt 336Gly Val Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Val Leu His Phe 100 105 110 ggt ctg tcc gct gag aga gca aga gcc ttg ggt att aac tgc cgc gtt 384Gly Leu Ser Ala Glu Arg Ala Arg Ala Leu Gly Ile Asn Cys Arg Val 115 120 125 gct gtc ata ggt gat gat gtt gca gtt ggc aga gaa aag ggt ggt atg 432Ala Val Ile Gly Asp Asp Val Ala Val Gly Arg Glu Lys Gly Gly Met 130 135 140 gtt ggt aga aga gca ttg gca ggt acc gtt ttg gtt cat aag att gta 480Val Gly Arg Arg Ala Leu Ala Gly Thr Val Leu Val His Lys Ile Val 145 150 155 160 ggt gcc ttc gca gaa gaa tat tct agt aag tat ggc tta gac ggt aca 528Gly Ala Phe Ala Glu Glu Tyr Ser Ser Lys Tyr Gly Leu Asp Gly Thr 165 170 175 gct aaa gtg gct aaa att atc aac gac aat ttg gtg acc att gga tct 576Ala Lys Val Ala Lys Ile Ile Asn Asp Asn Leu Val Thr Ile Gly Ser 180 185 190 tct tta gac cat tgt aaa gtt cct ggc agg aaa ttc gaa agt gaa tta 624Ser Leu Asp His Cys Lys Val Pro Gly Arg Lys Phe Glu Ser Glu Leu 195 200 205 aac gaa aaa caa atg gaa ttg ggt atg ggt att cat aac gaa cct ggt 672Asn Glu Lys Gln Met Glu Leu Gly Met Gly Ile His Asn Glu Pro Gly 210 215 220 gtg aaa gtt tta gac cct att cct tct acc gaa gac ttg atc tcc aag 720Val Lys Val Leu Asp Pro Ile Pro Ser Thr Glu Asp Leu Ile Ser Lys 225 230 235 240 tat atg cta cca aaa cta ttg gat cca aac gat aag gat aga gct ttt 768Tyr Met Leu Pro Lys Leu Leu Asp Pro Asn Asp Lys Asp Arg Ala Phe 245 250 255 gta aag ttt gat gaa gat gat gaa gtt gtc ttg tta gtt aac aat ctc 816Val Lys Phe Asp Glu Asp Asp Glu Val Val Leu Leu Val Asn Asn Leu 260 265 270 ggc ggt gtt tct aat ttt gtt att agt tct atc act tcc aaa act acg 864Gly Gly Val Ser Asn Phe Val Ile Ser Ser Ile Thr Ser Lys Thr Thr 275 280 285 gat ttc tta aag gaa aat tac aac ata acc ccg gtt caa aca att gct 912Asp Phe Leu Lys Glu Asn Tyr Asn Ile Thr Pro Val Gln Thr Ile Ala 290 295 300 ggc aca ttg atg acc tcc ttc aat ggt aat ggg ttc agt atc aca tta 960Gly Thr Leu Met Thr Ser Phe Asn Gly Asn Gly Phe Ser Ile Thr Leu 305 310 315 320 cta aac gcc act aag gct aca aag gct ttg caa tct gat ttt gag gag 1008Leu Asn Ala Thr Lys Ala Thr Lys Ala Leu Gln Ser Asp Phe Glu Glu 325 330 335 atc aaa tca gta cta gac ttg ttg aac gca ttt acg aac gca ccg ggc 1056Ile Lys Ser Val Leu Asp Leu Leu Asn Ala Phe Thr Asn Ala Pro Gly 340 345 350 tgg cca att gca gat ttt gaa aag act tct gcc cca tct gtt aac gat 1104Trp Pro Ile Ala Asp Phe Glu Lys Thr Ser Ala Pro Ser Val Asn Asp 355 360 365 gac ttg tta cat aat gaa gta aca gca aag gcc gtc ggt acc tat gac 1152Asp Leu Leu His Asn Glu Val Thr Ala Lys Ala Val Gly Thr Tyr Asp 370 375 380 ttt gac aag ttt gct gag tgg atg aag agt ggt gct gaa caa gtt atc 1200Phe Asp Lys Phe Ala Glu Trp Met Lys Ser Gly Ala Glu Gln Val Ile 385 390 395 400 aag agc gaa ccg cac att acg gaa cta gac aat caa gtt ggt gat ggt 1248Lys Ser Glu Pro His Ile Thr Glu Leu Asp Asn Gln Val Gly Asp Gly 405 410 415 gat tgt ggt tac act tta gtg gca gga gtt aaa ggc atc acc gaa aac 1296Asp Cys Gly Tyr Thr Leu Val Ala Gly Val Lys Gly Ile Thr Glu Asn 420 425 430 ctt gac aag ctg tcg aag gac tca tta tct cag gcg gtt gcc caa att 1344Leu Asp Lys Leu Ser Lys Asp Ser Leu Ser Gln Ala Val Ala Gln Ile 435 440 445 tca gat ttc att gaa ggc tca atg gga ggt act tct ggt ggt tta tat 1392Ser Asp Phe Ile Glu Gly Ser Met Gly Gly Thr Ser Gly Gly Leu Tyr 450 455 460 tct att ctt ttg tcg ggt ttt tca cac gga tta att cag gtt tgt aaa 1440Ser Ile Leu Leu Ser Gly Phe Ser His Gly Leu Ile Gln Val Cys Lys 465 470 475 480 tca aag gat gaa ccc gtc act aag gaa att gtg gct aag tca ctc gga 1488Ser Lys Asp Glu Pro Val Thr Lys Glu Ile Val Ala Lys Ser Leu Gly 485 490 495 att gca ttg gat act tta tac aaa tat aca aag gca agg aag gga tca 1536Ile Ala Leu Asp Thr Leu Tyr Lys Tyr Thr Lys Ala Arg Lys Gly Ser 500 505 510 tcc acc atg att gat gct tta gaa cca ttc gtt aaa gaa ttt act gca 1584Ser Thr Met Ile Asp Ala Leu Glu Pro Phe Val Lys Glu Phe Thr Ala 515 520 525 tct aag gat ttc aat aag gcg gta aaa gct gca gag gaa ggt gct aaa 1632Ser Lys Asp Phe Asn Lys Ala Val Lys Ala Ala Glu Glu Gly Ala Lys 530 535 540 tcc act gct aca ttc gag gcc aaa ttt ggc aga gct tcg tat gtc ggc 1680Ser Thr Ala Thr Phe Glu Ala Lys Phe Gly Arg Ala Ser Tyr Val Gly 545 550 555 560 gat tca tct caa gta gaa gat cct ggt gca gta ggc cta tgt gag ttt 1728Asp Ser Ser Gln Val Glu Asp Pro Gly Ala Val Gly Leu Cys Glu Phe 565 570 575 ttg aag ggg gtt caa agc gcc ttg taa 1755Leu Lys Gly Val Gln Ser Ala Leu 580 4584PRTSaccharomyces cerevisiae 4Met Ser Ala Lys Ser Phe Glu Val Thr Asp Pro Val Asn Ser Ser Leu 1 5 10 15 Lys Gly Phe Ala Leu Ala Asn Pro Ser Ile Thr Leu Val Pro Glu Glu 20 25 30 Lys Ile Leu Phe Arg Lys Thr Asp Ser Asp Lys Ile Ala Leu Ile Ser 35 40 45 Gly Gly Gly Ser Gly His Glu Pro Thr His Ala Gly Phe Ile Gly Lys 50 55 60 Gly Met Leu Ser Gly Ala Val Val Gly Glu Ile Phe Ala Ser Pro Ser 65 70 75 80 Thr Lys Gln Ile Leu Asn Ala Ile Arg Leu Val Asn Glu Asn Ala Ser 85 90 95 Gly Val Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Val Leu His Phe 100 105 110 Gly Leu Ser Ala Glu Arg Ala Arg Ala Leu Gly Ile Asn Cys Arg Val 115 120 125 Ala Val Ile Gly Asp Asp Val Ala Val Gly Arg Glu Lys Gly Gly Met 130 135 140 Val Gly Arg Arg Ala Leu Ala Gly Thr Val Leu Val His Lys Ile Val 145 150 155 160 Gly Ala Phe Ala Glu Glu Tyr Ser Ser Lys Tyr Gly Leu Asp Gly Thr 165 170 175 Ala Lys Val Ala Lys Ile Ile Asn Asp Asn Leu Val Thr Ile Gly Ser 180 185 190 Ser Leu Asp His Cys Lys Val Pro Gly Arg Lys Phe Glu Ser Glu Leu 195 200 205 Asn Glu Lys Gln Met Glu Leu Gly Met Gly Ile His Asn Glu Pro Gly 210 215 220 Val Lys Val Leu Asp Pro Ile Pro Ser Thr Glu Asp Leu Ile Ser Lys 225 230 235 240 Tyr Met Leu Pro Lys Leu Leu Asp Pro Asn Asp Lys Asp Arg Ala Phe 245 250 255 Val Lys Phe Asp Glu Asp Asp Glu Val Val Leu Leu Val Asn Asn Leu 260 265 270 Gly Gly Val Ser Asn Phe Val Ile Ser Ser Ile Thr Ser Lys Thr Thr

275 280 285 Asp Phe Leu Lys Glu Asn Tyr Asn Ile Thr Pro Val Gln Thr Ile Ala 290 295 300 Gly Thr Leu Met Thr Ser Phe Asn Gly Asn Gly Phe Ser Ile Thr Leu 305 310 315 320 Leu Asn Ala Thr Lys Ala Thr Lys Ala Leu Gln Ser Asp Phe Glu Glu 325 330 335 Ile Lys Ser Val Leu Asp Leu Leu Asn Ala Phe Thr Asn Ala Pro Gly 340 345 350 Trp Pro Ile Ala Asp Phe Glu Lys Thr Ser Ala Pro Ser Val Asn Asp 355 360 365 Asp Leu Leu His Asn Glu Val Thr Ala Lys Ala Val Gly Thr Tyr Asp 370 375 380 Phe Asp Lys Phe Ala Glu Trp Met Lys Ser Gly Ala Glu Gln Val Ile 385 390 395 400 Lys Ser Glu Pro His Ile Thr Glu Leu Asp Asn Gln Val Gly Asp Gly 405 410 415 Asp Cys Gly Tyr Thr Leu Val Ala Gly Val Lys Gly Ile Thr Glu Asn 420 425 430 Leu Asp Lys Leu Ser Lys Asp Ser Leu Ser Gln Ala Val Ala Gln Ile 435 440 445 Ser Asp Phe Ile Glu Gly Ser Met Gly Gly Thr Ser Gly Gly Leu Tyr 450 455 460 Ser Ile Leu Leu Ser Gly Phe Ser His Gly Leu Ile Gln Val Cys Lys 465 470 475 480 Ser Lys Asp Glu Pro Val Thr Lys Glu Ile Val Ala Lys Ser Leu Gly 485 490 495 Ile Ala Leu Asp Thr Leu Tyr Lys Tyr Thr Lys Ala Arg Lys Gly Ser 500 505 510 Ser Thr Met Ile Asp Ala Leu Glu Pro Phe Val Lys Glu Phe Thr Ala 515 520 525 Ser Lys Asp Phe Asn Lys Ala Val Lys Ala Ala Glu Glu Gly Ala Lys 530 535 540 Ser Thr Ala Thr Phe Glu Ala Lys Phe Gly Arg Ala Ser Tyr Val Gly 545 550 555 560 Asp Ser Ser Gln Val Glu Asp Pro Gly Ala Val Gly Leu Cys Glu Phe 565 570 575 Leu Lys Gly Val Gln Ser Ala Leu 580 51695DNAAgrobacterium tumefaciensCDS(1)..(1695) 5atg aag aag ctc atc aac gat cca tcc acc gtt gtc cgg gac atg ctg 48Met Lys Lys Leu Ile Asn Asp Pro Ser Thr Val Val Arg Asp Met Leu 1 5 10 15 gag ggc atc gtg gcg ctc agc ccc gaa acc att ctg ctt cag gat gag 96Glu Gly Ile Val Ala Leu Ser Pro Glu Thr Ile Leu Leu Gln Asp Glu 20 25 30 aac gtg gtc ata agg tcc ggc ctg cct gaa gcg gaa aag cgc aag gtt 144Asn Val Val Ile Arg Ser Gly Leu Pro Glu Ala Glu Lys Arg Lys Val 35 40 45 gca gtg ctt tcg ggc ggt ggc agc gga cat gag ccg gcc cac gcc ggt 192Ala Val Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Ala Gly 50 55 60 tat gtc ggc acg ggc atg ttg acg gtt gcg gtg gcg ggc gat gtc ttc 240Tyr Val Gly Thr Gly Met Leu Thr Val Ala Val Ala Gly Asp Val Phe 65 70 75 80 act tcg ccg agc acc gac gcg gtt ctc gcc ggc atc agg gcc gcg gcc 288Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Gly Ile Arg Ala Ala Ala 85 90 95 ggc cct gcc ggt gcg ctg gtc atc gtc aag aac tat acc ggc gac cgg 336Gly Pro Ala Gly Ala Leu Val Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 ctg aat ttc ggc ttg gcg gcg gag ctg gcg agg gcc gaa gga atc cct 384Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile Pro 115 120 125 gtc gag atc gtt gtc gtc gcc gac gac gtt gcc ttg aag gat acg gtt 432Val Glu Ile Val Val Val Ala Asp Asp Val Ala Leu Lys Asp Thr Val 130 135 140 ccc gcc gag cgc cgc cgc ggg att gcg ggg acg gtg ctc gtg cac aag 480Pro Ala Glu Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His Lys 145 150 155 160 ctc gcg ggg gcc gca gcg gaa aag ggc ctt cct ctt caa gag gtg gcc 528Leu Ala Gly Ala Ala Ala Glu Lys Gly Leu Pro Leu Gln Glu Val Ala 165 170 175 cgc atc gcc cgg gac gct gcc gcc aag cta tct tcc atg ggt gtc tcg 576Arg Ile Ala Arg Asp Ala Ala Ala Lys Leu Ser Ser Met Gly Val Ser 180 185 190 ctg gga tcc tgc acg ctg ccg gct gtc ggc aag ccg ggc ttc gtg ctt 624Leu Gly Ser Cys Thr Leu Pro Ala Val Gly Lys Pro Gly Phe Val Leu 195 200 205 ggc gag acc gaa atc gaa gtc ggg ctc ggt atc cat ggc gag cag ggc 672Gly Glu Thr Glu Ile Glu Val Gly Leu Gly Ile His Gly Glu Gln Gly 210 215 220 gtg cag cgg atg ccc att gcc tcg gct gac gcg ctc gtg cag ctg gtg 720Val Gln Arg Met Pro Ile Ala Ser Ala Asp Ala Leu Val Gln Leu Val 225 230 235 240 atc gaa acg atc gaa gcc gac ggc aag ctc gcc ggc ggc aat cgc gtc 768Ile Glu Thr Ile Glu Ala Asp Gly Lys Leu Ala Gly Gly Asn Arg Val 245 250 255 gct ctg ctg gtc aac ggc ctg ggg gca acg ccg ccg atg gaa ctc gcc 816Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Pro Met Glu Leu Ala 260 265 270 atc gtc gca cgg tcg gca gtc gcg cgg ctg gag gcg aaa ggc atc gtc 864Ile Val Ala Arg Ser Ala Val Ala Arg Leu Glu Ala Lys Gly Ile Val 275 280 285 gtg gaa cgt gcc tgg gcc ggc acc ttc ctt tca gcc ctc gat atg ccc 912Val Glu Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asp Met Pro 290 295 300 ggg ttt tcg ttg tcg gtc atg cag gtt gac gac gca gcg ctc agc ctc 960Gly Phe Ser Leu Ser Val Met Gln Val Asp Asp Ala Ala Leu Ser Leu 305 310 315 320 atc gac gcg cca acc gag gct ggc gca tgg ccg cgc ggc ggt gcg gtg 1008Ile Asp Ala Pro Thr Glu Ala Gly Ala Trp Pro Arg Gly Gly Ala Val 325 330 335 aac cgc aag cgg gtt ctg cct tcg gca aac gcc gaa aag acc gtg gtt 1056Asn Arg Lys Arg Val Leu Pro Ser Ala Asn Ala Glu Lys Thr Val Val 340 345 350 gcg aca aac aag atg acg gcg gcc ggc gag cgg ctt cgt tcg ggc gcg 1104Ala Thr Asn Lys Met Thr Ala Ala Gly Glu Arg Leu Arg Ser Gly Ala 355 360 365 gaa cgg tcc gcg aga gcc ctg atc gct gcg gag ccc agg ctg acg caa 1152Glu Arg Ser Ala Arg Ala Leu Ile Ala Ala Glu Pro Arg Leu Thr Gln 370 375 380 ctc gat agc gtt gca ggt gac ggc gac ctc ggc gcc agc atg gtg cgt 1200Leu Asp Ser Val Ala Gly Asp Gly Asp Leu Gly Ala Ser Met Val Arg 385 390 395 400 ggc ggc gag gcg atc ctt gcg ctg ccg aaa gag agt ttc ggc gac gtc 1248Gly Gly Glu Ala Ile Leu Ala Leu Pro Lys Glu Ser Phe Gly Asp Val 405 410 415 tcc gat gga ttg atg gcg atg gcc aat gcg atg cgc aag gcc atc ggc 1296Ser Asp Gly Leu Met Ala Met Ala Asn Ala Met Arg Lys Ala Ile Gly 420 425 430 gga agc tcg ggg ccg ttc tat gcg aca ggc ctc atg cgc gct tcg cga 1344Gly Ser Ser Gly Pro Phe Tyr Ala Thr Gly Leu Met Arg Ala Ser Arg 435 440 445 cag ctg gca ggg atc gat gag cca gcg gcc cag cag atg gcg gaa gca 1392Gln Leu Ala Gly Ile Asp Glu Pro Ala Ala Gln Gln Met Ala Glu Ala 450 455 460 ttc gtg gcg gct gtt gcg gcg gtc tcg gaa ctt ggc ggt gcg aaa ccg 1440Phe Val Ala Ala Val Ala Ala Val Ser Glu Leu Gly Gly Ala Lys Pro 465 470 475 480 ggc gat cgc acg atg atc gat gcg ctt tat ccg gca gcg aaa acc ttc 1488Gly Asp Arg Thr Met Ile Asp Ala Leu Tyr Pro Ala Ala Lys Thr Phe 485 490 495 agg gac aag ctt gtg aca ggc gct tcg gca gaa gaa gcc tgg caa tcc 1536Arg Asp Lys Leu Val Thr Gly Ala Ser Ala Glu Glu Ala Trp Gln Ser 500 505 510 gcg gtg gcg gcg ggc gag gtg ggc gca gag gcg aca gcg tcc atg aag 1584Ala Val Ala Ala Gly Glu Val Gly Ala Glu Ala Thr Ala Ser Met Lys 515 520 525 cca cgg ctc ggg cgc gca agt tac ctc ggt gag cgg gcc gtc ggc cat 1632Pro Arg Leu Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala Val Gly His 530 535 540 ccc gat ggg ggc gcg gtc gcc gtt ggc atc tgg ctc aaa gct atc gag 1680Pro Asp Gly Gly Ala Val Ala Val Gly Ile Trp Leu Lys Ala Ile Glu 545 550 555 560 gct gcg atc tcg tga 1695Ala Ala Ile Ser 6564PRTAgrobacterium tumefaciens 6Met Lys Lys Leu Ile Asn Asp Pro Ser Thr Val Val Arg Asp Met Leu 1 5 10 15 Glu Gly Ile Val Ala Leu Ser Pro Glu Thr Ile Leu Leu Gln Asp Glu 20 25 30 Asn Val Val Ile Arg Ser Gly Leu Pro Glu Ala Glu Lys Arg Lys Val 35 40 45 Ala Val Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Ala Gly 50 55 60 Tyr Val Gly Thr Gly Met Leu Thr Val Ala Val Ala Gly Asp Val Phe 65 70 75 80 Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Gly Ile Arg Ala Ala Ala 85 90 95 Gly Pro Ala Gly Ala Leu Val Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile Pro 115 120 125 Val Glu Ile Val Val Val Ala Asp Asp Val Ala Leu Lys Asp Thr Val 130 135 140 Pro Ala Glu Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His Lys 145 150 155 160 Leu Ala Gly Ala Ala Ala Glu Lys Gly Leu Pro Leu Gln Glu Val Ala 165 170 175 Arg Ile Ala Arg Asp Ala Ala Ala Lys Leu Ser Ser Met Gly Val Ser 180 185 190 Leu Gly Ser Cys Thr Leu Pro Ala Val Gly Lys Pro Gly Phe Val Leu 195 200 205 Gly Glu Thr Glu Ile Glu Val Gly Leu Gly Ile His Gly Glu Gln Gly 210 215 220 Val Gln Arg Met Pro Ile Ala Ser Ala Asp Ala Leu Val Gln Leu Val 225 230 235 240 Ile Glu Thr Ile Glu Ala Asp Gly Lys Leu Ala Gly Gly Asn Arg Val 245 250 255 Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Pro Met Glu Leu Ala 260 265 270 Ile Val Ala Arg Ser Ala Val Ala Arg Leu Glu Ala Lys Gly Ile Val 275 280 285 Val Glu Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asp Met Pro 290 295 300 Gly Phe Ser Leu Ser Val Met Gln Val Asp Asp Ala Ala Leu Ser Leu 305 310 315 320 Ile Asp Ala Pro Thr Glu Ala Gly Ala Trp Pro Arg Gly Gly Ala Val 325 330 335 Asn Arg Lys Arg Val Leu Pro Ser Ala Asn Ala Glu Lys Thr Val Val 340 345 350 Ala Thr Asn Lys Met Thr Ala Ala Gly Glu Arg Leu Arg Ser Gly Ala 355 360 365 Glu Arg Ser Ala Arg Ala Leu Ile Ala Ala Glu Pro Arg Leu Thr Gln 370 375 380 Leu Asp Ser Val Ala Gly Asp Gly Asp Leu Gly Ala Ser Met Val Arg 385 390 395 400 Gly Gly Glu Ala Ile Leu Ala Leu Pro Lys Glu Ser Phe Gly Asp Val 405 410 415 Ser Asp Gly Leu Met Ala Met Ala Asn Ala Met Arg Lys Ala Ile Gly 420 425 430 Gly Ser Ser Gly Pro Phe Tyr Ala Thr Gly Leu Met Arg Ala Ser Arg 435 440 445 Gln Leu Ala Gly Ile Asp Glu Pro Ala Ala Gln Gln Met Ala Glu Ala 450 455 460 Phe Val Ala Ala Val Ala Ala Val Ser Glu Leu Gly Gly Ala Lys Pro 465 470 475 480 Gly Asp Arg Thr Met Ile Asp Ala Leu Tyr Pro Ala Ala Lys Thr Phe 485 490 495 Arg Asp Lys Leu Val Thr Gly Ala Ser Ala Glu Glu Ala Trp Gln Ser 500 505 510 Ala Val Ala Ala Gly Glu Val Gly Ala Glu Ala Thr Ala Ser Met Lys 515 520 525 Pro Arg Leu Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala Val Gly His 530 535 540 Pro Asp Gly Gly Ala Val Ala Val Gly Ile Trp Leu Lys Ala Ile Glu 545 550 555 560 Ala Ala Ile Ser 71659DNACitrobacter freundiiCDS(1)..(1659) 7atg tct caa ttc ttt ttt aac caa cgc acc cat ctt gtg agc gac gtc 48Met Ser Gln Phe Phe Phe Asn Gln Arg Thr His Leu Val Ser Asp Val 1 5 10 15 atc gac ggg gcg att atc gcc agc cca tgg aat aac ctg gcg cgt ctg 96Ile Asp Gly Ala Ile Ile Ala Ser Pro Trp Asn Asn Leu Ala Arg Leu 20 25 30 gaa agc gat ccg gcc att cgc atc gtg gtc cgt cgt gac ctt aat aaa 144Glu Ser Asp Pro Ala Ile Arg Ile Val Val Arg Arg Asp Leu Asn Lys 35 40 45 aat aac gta gcg gtc att tcc ggc ggc ggt tcg gga cac gaa ccc gcg 192Asn Asn Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala 50 55 60 cac gtt ggg ttt atc ggt aaa ggc atg cta acc gct gcg gtc tgc ggc 240His Val Gly Phe Ile Gly Lys Gly Met Leu Thr Ala Ala Val Cys Gly 65 70 75 80 gac gtt ttc gcc tcc ccg agc gtg gat gct gta ctg acc gcg att cag 288Asp Val Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala Ile Gln 85 90 95 gcg gtg acc ggt gag gct ggc tgt ttg ttg att gtg aaa aac tac acc 336Ala Val Thr Gly Glu Ala Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr 100 105 110 ggt gac cgt ctt aat ttc ggt ctc gcc gcc gag aag gcg cgt cgc ctt 384Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg Arg Leu 115 120 125 ggc tat aac gtt gaa atg ctg att gtc ggc gac gac atc tcc ctg ccg 432Gly Tyr Asn Val Glu Met Leu Ile Val Gly Asp Asp Ile Ser Leu Pro 130 135 140 gat aac aaa cac cca cgt ggc att gcg gga act atc ctg gtg cat aaa 480Asp Asn Lys His Pro Arg Gly Ile Ala Gly Thr Ile Leu Val His Lys 145 150 155 160 atc gca ggc tat ttt gcc gaa cgc ggc tat aac ctc gcc acc gtc ctg 528Ile Ala Gly Tyr Phe Ala Glu Arg Gly Tyr Asn Leu Ala Thr Val Leu 165 170 175 cgt gaa gcg cag tac gca gcc agc aac acc ttt agc ctg ggc gta gcg 576Arg Glu Ala Gln Tyr Ala Ala Ser Asn Thr Phe Ser Leu Gly Val Ala 180 185 190 ctt tcc agc tgt cat ctg ccg caa gaa acc gac gca gcc cct cgt cat 624Leu Ser Ser Cys His Leu Pro Gln Glu Thr Asp Ala Ala Pro Arg His 195 200 205 cat ccg ggt cat gcg gag ctg ggt atg gga att cac ggc gaa cca ggc 672His Pro Gly His Ala Glu Leu Gly Met Gly Ile His Gly Glu Pro Gly 210 215 220 gca tcg gtt atc gac acc caa aac agt gcg caa gtg gta aac ctg atg 720Ala Ser Val Ile Asp Thr Gln Asn Ser Ala Gln Val Val Asn Leu Met 225 230 235 240 gtg gat aaa ctg ctg gcc gcc ctg cct gaa acc ggt cgt ctg gcg gtg 768Val Asp Lys Leu Leu Ala Ala Leu Pro Glu Thr Gly Arg Leu Ala Val 245 250 255 atg att aat aat ctt ggc ggc gtt tcc gtg gcc gaa atg gcc atc atc

816Met Ile Asn Asn Leu Gly Gly Val Ser Val Ala Glu Met Ala Ile Ile 260 265 270 acc cgc gaa ctc gcc agc agc ccg ctg cac tcg cgt atc gac tgg cta 864Thr Arg Glu Leu Ala Ser Ser Pro Leu His Ser Arg Ile Asp Trp Leu 275 280 285 att ggc ccg gcc tcg ctg gtc acc gcg ctg gat atg aaa ggc ttc tca 912Ile Gly Pro Ala Ser Leu Val Thr Ala Leu Asp Met Lys Gly Phe Ser 290 295 300 ctg acg gcc atc gtg ctg gaa gag agc atc gaa aaa gca ctg ctc acc 960Leu Thr Ala Ile Val Leu Glu Glu Ser Ile Glu Lys Ala Leu Leu Thr 305 310 315 320 gaa gtg gaa acc agc aac tgg ccg acg ccg gtc cca ccg cgt gaa atc 1008Glu Val Glu Thr Ser Asn Trp Pro Thr Pro Val Pro Pro Arg Glu Ile 325 330 335 acc tgc gta gtg tca tct cac gct agc gcc cgc gtg gaa ttc cag cct 1056Thr Cys Val Val Ser Ser His Ala Ser Ala Arg Val Glu Phe Gln Pro 340 345 350 tcg gca aac gcc ctg gtg gcc ggg att gtg gag ctg gtc acc gca acc 1104Ser Ala Asn Ala Leu Val Ala Gly Ile Val Glu Leu Val Thr Ala Thr 355 360 365 ctt tcc gat ctg gag act cat ctg aat gcg ctg gac gcc aaa gtc ggc 1152Leu Ser Asp Leu Glu Thr His Leu Asn Ala Leu Asp Ala Lys Val Gly 370 375 380 gat ggc gat acc ggt tcg acc ttt gcc gcc gcg gcg cgt gaa att gcc 1200Asp Gly Asp Thr Gly Ser Thr Phe Ala Ala Ala Ala Arg Glu Ile Ala 385 390 395 400 agc ctg ctg cat cgc cag cag ctg ccg ctg aat aac ctt gcc acg ctg 1248Ser Leu Leu His Arg Gln Gln Leu Pro Leu Asn Asn Leu Ala Thr Leu 405 410 415 ttc gcg ctg att ggc gaa cgt ctg acc gtg gtg atg ggc ggt tcc agc 1296Phe Ala Leu Ile Gly Glu Arg Leu Thr Val Val Met Gly Gly Ser Ser 420 425 430 ggt gtg ctg atg tca atc ttc ttt acc gcc gcc ggg cag aaa ctg gaa 1344Gly Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Lys Leu Glu 435 440 445 cag ggc gct aac gtt gtc gaa gcg cta aat acg ggg ctg gcg cag atg 1392Gln Gly Ala Asn Val Val Glu Ala Leu Asn Thr Gly Leu Ala Gln Met 450 455 460 aag ttc tac ggc ggc gca gac gaa ggc gat cgc acg atg att gat gcg 1440Lys Phe Tyr Gly Gly Ala Asp Glu Gly Asp Arg Thr Met Ile Asp Ala 465 470 475 480 ctg caa ccg gcc ctg acc tcg ctg ctc gca cag ccg aaa aat ctg cag 1488Leu Gln Pro Ala Leu Thr Ser Leu Leu Ala Gln Pro Lys Asn Leu Gln 485 490 495 gcc gca ttc gac gcc gcg caa gcg gga gcc gaa cga acc tgt ttg tcg 1536Ala Ala Phe Asp Ala Ala Gln Ala Gly Ala Glu Arg Thr Cys Leu Ser 500 505 510 agc aaa gcc aat gcg ggt cgc gca tcg tat ctg agc agc gaa agc ctg 1584Ser Lys Ala Asn Ala Gly Arg Ala Ser Tyr Leu Ser Ser Glu Ser Leu 515 520 525 ctc gga aat atg gac ccc ggc gcg cag cgc cta gcg atg gtg ttt aaa 1632Leu Gly Asn Met Asp Pro Gly Ala Gln Arg Leu Ala Met Val Phe Lys 530 535 540 gcg cta gcg gag agt gag ctg ggc taa 1659Ala Leu Ala Glu Ser Glu Leu Gly 545 550 8552PRTCitrobacter freundii 8Met Ser Gln Phe Phe Phe Asn Gln Arg Thr His Leu Val Ser Asp Val 1 5 10 15 Ile Asp Gly Ala Ile Ile Ala Ser Pro Trp Asn Asn Leu Ala Arg Leu 20 25 30 Glu Ser Asp Pro Ala Ile Arg Ile Val Val Arg Arg Asp Leu Asn Lys 35 40 45 Asn Asn Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala 50 55 60 His Val Gly Phe Ile Gly Lys Gly Met Leu Thr Ala Ala Val Cys Gly 65 70 75 80 Asp Val Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala Ile Gln 85 90 95 Ala Val Thr Gly Glu Ala Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr 100 105 110 Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg Arg Leu 115 120 125 Gly Tyr Asn Val Glu Met Leu Ile Val Gly Asp Asp Ile Ser Leu Pro 130 135 140 Asp Asn Lys His Pro Arg Gly Ile Ala Gly Thr Ile Leu Val His Lys 145 150 155 160 Ile Ala Gly Tyr Phe Ala Glu Arg Gly Tyr Asn Leu Ala Thr Val Leu 165 170 175 Arg Glu Ala Gln Tyr Ala Ala Ser Asn Thr Phe Ser Leu Gly Val Ala 180 185 190 Leu Ser Ser Cys His Leu Pro Gln Glu Thr Asp Ala Ala Pro Arg His 195 200 205 His Pro Gly His Ala Glu Leu Gly Met Gly Ile His Gly Glu Pro Gly 210 215 220 Ala Ser Val Ile Asp Thr Gln Asn Ser Ala Gln Val Val Asn Leu Met 225 230 235 240 Val Asp Lys Leu Leu Ala Ala Leu Pro Glu Thr Gly Arg Leu Ala Val 245 250 255 Met Ile Asn Asn Leu Gly Gly Val Ser Val Ala Glu Met Ala Ile Ile 260 265 270 Thr Arg Glu Leu Ala Ser Ser Pro Leu His Ser Arg Ile Asp Trp Leu 275 280 285 Ile Gly Pro Ala Ser Leu Val Thr Ala Leu Asp Met Lys Gly Phe Ser 290 295 300 Leu Thr Ala Ile Val Leu Glu Glu Ser Ile Glu Lys Ala Leu Leu Thr 305 310 315 320 Glu Val Glu Thr Ser Asn Trp Pro Thr Pro Val Pro Pro Arg Glu Ile 325 330 335 Thr Cys Val Val Ser Ser His Ala Ser Ala Arg Val Glu Phe Gln Pro 340 345 350 Ser Ala Asn Ala Leu Val Ala Gly Ile Val Glu Leu Val Thr Ala Thr 355 360 365 Leu Ser Asp Leu Glu Thr His Leu Asn Ala Leu Asp Ala Lys Val Gly 370 375 380 Asp Gly Asp Thr Gly Ser Thr Phe Ala Ala Ala Ala Arg Glu Ile Ala 385 390 395 400 Ser Leu Leu His Arg Gln Gln Leu Pro Leu Asn Asn Leu Ala Thr Leu 405 410 415 Phe Ala Leu Ile Gly Glu Arg Leu Thr Val Val Met Gly Gly Ser Ser 420 425 430 Gly Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Lys Leu Glu 435 440 445 Gln Gly Ala Asn Val Val Glu Ala Leu Asn Thr Gly Leu Ala Gln Met 450 455 460 Lys Phe Tyr Gly Gly Ala Asp Glu Gly Asp Arg Thr Met Ile Asp Ala 465 470 475 480 Leu Gln Pro Ala Leu Thr Ser Leu Leu Ala Gln Pro Lys Asn Leu Gln 485 490 495 Ala Ala Phe Asp Ala Ala Gln Ala Gly Ala Glu Arg Thr Cys Leu Ser 500 505 510 Ser Lys Ala Asn Ala Gly Arg Ala Ser Tyr Leu Ser Ser Glu Ser Leu 515 520 525 Leu Gly Asn Met Asp Pro Gly Ala Gln Arg Leu Ala Met Val Phe Lys 530 535 540 Ala Leu Ala Glu Ser Glu Leu Gly 545 550 91740DNAArtificial sequenceattR-cat-attL-PtacM-SD-spacer 9tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tctctcccca tccccctgtt cacaattaat 1680catcggctcg tataatgtgt ggaattgtga gcggataaca atttcacaca ggagactgcc 17401080DNAArtificial sequencePtacM 10ctccccatcc ccctgttcac aattaatcat cggctcgtat aatgtgtgga attgtgagcg 60gataacaatt tcacacagga 80112844DNAArtificial sequencePtacMgldA::Cm 11tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tctctcccca tccccctgtt cacaattaat 1680catcggctcg tataatgtgt ggaattgtga gcggataaca atttcacaca ggagactgcc 1740atggaccgca ttattcaatc accgggtaaa tacatccagg gcgctgatgt gattaatcgt 1800ctgggcgaat acctgaagcc gctggcagaa cgctggttag tggtgggtga caaatttgtt 1860ttaggttttg ctcaatccac tgtcgagaaa agctttaaag atgctggact ggtagtagaa 1920attgcgccgt ttggcggtga atgttcgcaa aatgagatcg accgtctgcg tggcatcgcg 1980gagactgcgc agtgtggcgc aattctcggt atcggtggcg gaaaaaccct cgatactgcc 2040aaagcactgg cacatttcat gggtgttccg gtagcgatcg caccgactat cgcctctacc 2100gatgcaccgt gcagcgcatt gtctgttatc tacaccgatg agggtgagtt tgaccgctat 2160ctgctgttgc caaataaccc gaatatggtc attgtcgaca ccaaaatcgt cgctggcgca 2220cctgcacgtc tgttagcggc gggtatcggc gatgcgctgg caacctggtt tgaagcgcgt 2280gcctgctctc gtagcggcgc gaccaccatg gcgggcggca agtgcaccca ggctgcgctg 2340gcactggctg aactgtgcta caacaccctg ctggaagaag gcgaaaaagc gatgcttgct 2400gccgaacagc atgtagtgac tccggcgctg gagcgcgtga ttgaagcgaa cacctatttg 2460agcggtgttg gttttgaaag tggtggtctg gctgcggcgc acgcagtgca taacggcctg 2520accgctatcc cggacgcgca tcactattat cacggtgaaa aagtggcatt cggtacgctg 2580acgcagctgg ttctggaaaa tgcgccggtg gaggaaatcg aaaccgtagc tgcccttagc 2640catgcggtag gtttgccaat aactctcgct caactggata ttaaagaaga tgtcccggcg 2700aaaatgcgaa ttgtggcaga agcggcatgt gcagaaggtg aaaccattca caacatgcct 2760ggcggcgcga cgccagatca ggtttacgcc gctctgctgg tagccgacca gtacggtcag 2820cgtttcctgc aagagtggga ataa 28441277DNAArtificial sequenceatL-ptac-gldA 12acatcagcgc cctggatgta tttacccggt gattgaataa tgcggtccat ggcagtctcc 60tgtgtgaaat tgttatc 771377DNAArtificial sequenceatL-Ptac-fsaB1 13aacgccgcct ctgccgacgc tatcgccagc ctgctgcaac atgaactgga actgtaaatc 60tagacgctca agttagt 771450DNAArtificial sequencepMW-dak1F 14tgattacgcc aagcttagga ggttaaatgt ccgctaaatc gtttgaagtc 501552DNAArtificial sequencepMW-dak1R 15atcctctaga gtcgacgcgg ccgctactta caaggcgctt tgaaccccct tc 5216846DNAEscherichia coliCDS(1)..(846) 16atg agt caa aca tca acc ttg aaa ggc cag tgc att gct gaa ttc ctc 48Met Ser Gln Thr Ser Thr Leu Lys Gly Gln Cys Ile Ala Glu Phe Leu 1 5 10 15 ggt acc ggg ttg ttg att ttc ttc ggt gtg ggt tgc gtt gca gca cta 96Gly Thr Gly Leu Leu Ile Phe Phe Gly Val Gly Cys Val Ala Ala Leu 20 25 30 aaa gtc gct ggt gcg tct ttt ggt cag tgg gaa atc agt gtc att tgg 144Lys Val Ala Gly Ala Ser Phe Gly Gln Trp Glu Ile Ser Val Ile Trp 35 40 45 gga ctg ggg gtg gca atg gcc atc tac ctg acc gca ggg gtt tcc ggc 192Gly Leu Gly Val Ala Met Ala Ile Tyr Leu Thr Ala Gly Val Ser Gly 50 55 60 gcg cat ctt aat ccc gct gtt acc att gca ttg tgg ctg ttt gcc tgt 240Ala His Leu Asn Pro Ala Val Thr Ile Ala Leu Trp Leu Phe Ala Cys 65 70 75 80 ttc gac aag cgc aaa gtt att cct ttt atc gtt tca caa gtt gcc ggc 288Phe Asp Lys Arg Lys Val Ile Pro Phe Ile Val Ser Gln Val Ala Gly 85 90 95 gct ttc tgt gct gcg gct tta gtt tac ggg ctt tac tac aat tta ttt 336Ala Phe Cys Ala Ala Ala Leu Val Tyr Gly Leu Tyr Tyr Asn Leu Phe 100 105 110 ttc gac ttc gag cag act cat cac att gtt cgc ggc agc gtt gaa agt 384Phe Asp Phe Glu Gln Thr His His Ile Val Arg Gly Ser Val Glu Ser 115 120 125 gtt gat ctg gct ggc act ttc tct act tac cct aat cct cat atc aat 432Val Asp Leu Ala Gly Thr Phe Ser Thr Tyr Pro Asn Pro His Ile Asn 130 135 140 ttt gtg cag gct ttc gca gtt gag atg gtg att acc gct att ctg atg 480Phe Val Gln Ala Phe Ala Val Glu Met Val Ile Thr Ala Ile Leu Met 145 150 155 160 ggg ctg atc ctg gcg tta acg gac gat ggc aac ggt gta cca cgc ggc 528Gly Leu Ile Leu Ala Leu Thr Asp Asp Gly Asn Gly Val Pro Arg Gly 165 170 175 cct ttg gct ccc ttg ctg att ggt cta ctg att gcg gtc att ggc gca 576Pro Leu Ala Pro Leu Leu Ile Gly Leu Leu Ile Ala Val Ile Gly Ala 180 185 190 tct atg ggc cca ttg aca ggt ttt gcc atg aac cca gcg cgt gac ttc 624Ser Met Gly Pro Leu Thr Gly Phe Ala Met Asn Pro Ala Arg Asp Phe 195 200 205 ggt ccg aaa gtc ttt gcc tgg ctg gcg ggc tgg ggc aat gtc gcc ttt 672Gly Pro Lys Val Phe Ala Trp Leu Ala Gly Trp Gly Asn Val Ala Phe 210 215 220 acc ggc ggc aga gac att cct tac ttc ctg gtg ccg ctt ttc ggc cct 720Thr Gly Gly Arg Asp Ile Pro Tyr Phe Leu Val Pro Leu Phe Gly Pro 225 230 235

240 atc gtt ggc gcg att gta ggt gca ttt gcc tac cgc aaa ctg att ggt 768Ile Val Gly Ala Ile Val Gly Ala Phe Ala Tyr Arg Lys Leu Ile Gly 245 250 255 cgc cat ttg cct tgc gat atc tgt gtt gtg gaa gaa aag gaa acc aca 816Arg His Leu Pro Cys Asp Ile Cys Val Val Glu Glu Lys Glu Thr Thr 260 265 270 act cct tca gaa caa aaa gct tcg ctg taa 846Thr Pro Ser Glu Gln Lys Ala Ser Leu 275 280 17281PRTEscherichia coli 17Met Ser Gln Thr Ser Thr Leu Lys Gly Gln Cys Ile Ala Glu Phe Leu 1 5 10 15 Gly Thr Gly Leu Leu Ile Phe Phe Gly Val Gly Cys Val Ala Ala Leu 20 25 30 Lys Val Ala Gly Ala Ser Phe Gly Gln Trp Glu Ile Ser Val Ile Trp 35 40 45 Gly Leu Gly Val Ala Met Ala Ile Tyr Leu Thr Ala Gly Val Ser Gly 50 55 60 Ala His Leu Asn Pro Ala Val Thr Ile Ala Leu Trp Leu Phe Ala Cys 65 70 75 80 Phe Asp Lys Arg Lys Val Ile Pro Phe Ile Val Ser Gln Val Ala Gly 85 90 95 Ala Phe Cys Ala Ala Ala Leu Val Tyr Gly Leu Tyr Tyr Asn Leu Phe 100 105 110 Phe Asp Phe Glu Gln Thr His His Ile Val Arg Gly Ser Val Glu Ser 115 120 125 Val Asp Leu Ala Gly Thr Phe Ser Thr Tyr Pro Asn Pro His Ile Asn 130 135 140 Phe Val Gln Ala Phe Ala Val Glu Met Val Ile Thr Ala Ile Leu Met 145 150 155 160 Gly Leu Ile Leu Ala Leu Thr Asp Asp Gly Asn Gly Val Pro Arg Gly 165 170 175 Pro Leu Ala Pro Leu Leu Ile Gly Leu Leu Ile Ala Val Ile Gly Ala 180 185 190 Ser Met Gly Pro Leu Thr Gly Phe Ala Met Asn Pro Ala Arg Asp Phe 195 200 205 Gly Pro Lys Val Phe Ala Trp Leu Ala Gly Trp Gly Asn Val Ala Phe 210 215 220 Thr Gly Gly Arg Asp Ile Pro Tyr Phe Leu Val Pro Leu Phe Gly Pro 225 230 235 240 Ile Val Gly Ala Ile Val Gly Ala Phe Ala Tyr Arg Lys Leu Ile Gly 245 250 255 Arg His Leu Pro Cys Asp Ile Cys Val Val Glu Glu Lys Glu Thr Thr 260 265 270 Thr Pro Ser Glu Gln Lys Ala Ser Leu 275 280 18768DNAEscherichia coliCDS(1)..(768) 18atg cga cat cct tta gtg atg ggt aac tgg aaa ctg aac ggc agc cgc 48Met Arg His Pro Leu Val Met Gly Asn Trp Lys Leu Asn Gly Ser Arg 1 5 10 15 cac atg gtt cac gag ctg gtt tct aac ctg cgt aaa gag ctg gca ggt 96His Met Val His Glu Leu Val Ser Asn Leu Arg Lys Glu Leu Ala Gly 20 25 30 gtt gct ggc tgt gcg gtt gca atc gca cca ccg gaa atg tat atc gat 144Val Ala Gly Cys Ala Val Ala Ile Ala Pro Pro Glu Met Tyr Ile Asp 35 40 45 atg gcg aag cgc gaa gct gaa ggc agc cac atc atg ctg ggt gcg caa 192Met Ala Lys Arg Glu Ala Glu Gly Ser His Ile Met Leu Gly Ala Gln 50 55 60 aac gtg gac ctg aac ctg tcc ggc gca ttc acc ggt gaa acc tct gct 240Asn Val Asp Leu Asn Leu Ser Gly Ala Phe Thr Gly Glu Thr Ser Ala 65 70 75 80 gct atg ctg aaa gac atc ggc gca cag tac atc atc atc ggt cac tct 288Ala Met Leu Lys Asp Ile Gly Ala Gln Tyr Ile Ile Ile Gly His Ser 85 90 95 gaa cgt cgt act tac cac aaa gaa tct gac gaa ctg atc gcg aaa aaa 336Glu Arg Arg Thr Tyr His Lys Glu Ser Asp Glu Leu Ile Ala Lys Lys 100 105 110 ttc gcg gtg ctg aaa gag cag ggc ctg act ccg gtt ctg tgc atc ggt 384Phe Ala Val Leu Lys Glu Gln Gly Leu Thr Pro Val Leu Cys Ile Gly 115 120 125 gaa acc gaa gct gaa aat gaa gcg ggc aaa act gaa gaa gtt tgc gca 432Glu Thr Glu Ala Glu Asn Glu Ala Gly Lys Thr Glu Glu Val Cys Ala 130 135 140 cgt cag atc gac gcg gta ctg aaa act cag ggt gct gcg gca ttc gaa 480Arg Gln Ile Asp Ala Val Leu Lys Thr Gln Gly Ala Ala Ala Phe Glu 145 150 155 160 ggt gcg gtt atc gct tac gaa cct gta tgg gca atc ggt act ggc aaa 528Gly Ala Val Ile Ala Tyr Glu Pro Val Trp Ala Ile Gly Thr Gly Lys 165 170 175 tct gca act ccg gct cag gca cag gct gtt cac aaa ttc atc cgt gac 576Ser Ala Thr Pro Ala Gln Ala Gln Ala Val His Lys Phe Ile Arg Asp 180 185 190 cac atc gct aaa gtt gac gct aac atc gct gaa caa gtg atc att cag 624His Ile Ala Lys Val Asp Ala Asn Ile Ala Glu Gln Val Ile Ile Gln 195 200 205 tac ggc ggc tct gta aac gcg tct aac gct gca gaa ctg ttt gct cag 672Tyr Gly Gly Ser Val Asn Ala Ser Asn Ala Ala Glu Leu Phe Ala Gln 210 215 220 ccg gat atc gac ggc gcg ctg gtt ggt ggt gct tct ctg aaa gct gac 720Pro Asp Ile Asp Gly Ala Leu Val Gly Gly Ala Ser Leu Lys Ala Asp 225 230 235 240 gcc ttc gca gta atc gtt aaa gct gca gaa gcg gct aaa cag gct taa 768Ala Phe Ala Val Ile Val Lys Ala Ala Glu Ala Ala Lys Gln Ala 245 250 255 19255PRTEscherichia coli 19Met Arg His Pro Leu Val Met Gly Asn Trp Lys Leu Asn Gly Ser Arg 1 5 10 15 His Met Val His Glu Leu Val Ser Asn Leu Arg Lys Glu Leu Ala Gly 20 25 30 Val Ala Gly Cys Ala Val Ala Ile Ala Pro Pro Glu Met Tyr Ile Asp 35 40 45 Met Ala Lys Arg Glu Ala Glu Gly Ser His Ile Met Leu Gly Ala Gln 50 55 60 Asn Val Asp Leu Asn Leu Ser Gly Ala Phe Thr Gly Glu Thr Ser Ala 65 70 75 80 Ala Met Leu Lys Asp Ile Gly Ala Gln Tyr Ile Ile Ile Gly His Ser 85 90 95 Glu Arg Arg Thr Tyr His Lys Glu Ser Asp Glu Leu Ile Ala Lys Lys 100 105 110 Phe Ala Val Leu Lys Glu Gln Gly Leu Thr Pro Val Leu Cys Ile Gly 115 120 125 Glu Thr Glu Ala Glu Asn Glu Ala Gly Lys Thr Glu Glu Val Cys Ala 130 135 140 Arg Gln Ile Asp Ala Val Leu Lys Thr Gln Gly Ala Ala Ala Phe Glu 145 150 155 160 Gly Ala Val Ile Ala Tyr Glu Pro Val Trp Ala Ile Gly Thr Gly Lys 165 170 175 Ser Ala Thr Pro Ala Gln Ala Gln Ala Val His Lys Phe Ile Arg Asp 180 185 190 His Ile Ala Lys Val Asp Ala Asn Ile Ala Glu Gln Val Ile Ile Gln 195 200 205 Tyr Gly Gly Ser Val Asn Ala Ser Asn Ala Ala Glu Leu Phe Ala Gln 210 215 220 Pro Asp Ile Asp Gly Ala Leu Val Gly Gly Ala Ser Leu Lys Ala Asp 225 230 235 240 Ala Phe Ala Val Ile Val Lys Ala Ala Glu Ala Ala Lys Gln Ala 245 250 255 201080DNAEscherichia coliCDS(1)..(1080) 20atg tct aag att ttt gat ttc gta aaa cct ggc gta atc act ggt gat 48Met Ser Lys Ile Phe Asp Phe Val Lys Pro Gly Val Ile Thr Gly Asp 1 5 10 15 gac gta cag aaa gtt ttc cag gta gca aaa gaa aac aac ttc gca ctg 96Asp Val Gln Lys Val Phe Gln Val Ala Lys Glu Asn Asn Phe Ala Leu 20 25 30 cca gca gta aac tgc gtc ggt act gac tcc atc aac gcc gta ctg gaa 144Pro Ala Val Asn Cys Val Gly Thr Asp Ser Ile Asn Ala Val Leu Glu 35 40 45 acc gct gct aaa gtt aaa gcg ccg gtt atc gtt cag ttc tcc aac ggt 192Thr Ala Ala Lys Val Lys Ala Pro Val Ile Val Gln Phe Ser Asn Gly 50 55 60 ggt gct tcc ttt atc gct ggt aaa ggc gtg aaa tct gac gtt ccg cag 240Gly Ala Ser Phe Ile Ala Gly Lys Gly Val Lys Ser Asp Val Pro Gln 65 70 75 80 ggt gct gct atc ctg ggc gcg atc tct ggt gcg cat cac gtt cac cag 288Gly Ala Ala Ile Leu Gly Ala Ile Ser Gly Ala His His Val His Gln 85 90 95 atg gct gaa cat tat ggt gtt ccg gtt atc ctg cac act gac cac tgc 336Met Ala Glu His Tyr Gly Val Pro Val Ile Leu His Thr Asp His Cys 100 105 110 gcg aag aaa ctg ctg ccg tgg atc gac ggt ctg ttg gac gcg ggt gaa 384Ala Lys Lys Leu Leu Pro Trp Ile Asp Gly Leu Leu Asp Ala Gly Glu 115 120 125 aaa cac ttc gca gct acc ggt aag ccg ctg ttc tct tct cac atg atc 432Lys His Phe Ala Ala Thr Gly Lys Pro Leu Phe Ser Ser His Met Ile 130 135 140 gac ctg tct gaa gaa tct ctg caa gag aac atc gaa atc tgc tct aaa 480Asp Leu Ser Glu Glu Ser Leu Gln Glu Asn Ile Glu Ile Cys Ser Lys 145 150 155 160 tac ctg gag cgc atg tcc aaa atc ggc atg act ctg gaa atc gaa ctg 528Tyr Leu Glu Arg Met Ser Lys Ile Gly Met Thr Leu Glu Ile Glu Leu 165 170 175 ggt tgc acc ggt ggt gaa gaa gac ggc gtg gac aac agc cac atg gac 576Gly Cys Thr Gly Gly Glu Glu Asp Gly Val Asp Asn Ser His Met Asp 180 185 190 gct tct gca ctg tac acc cag ccg gaa gac gtt gat tac gca tac acc 624Ala Ser Ala Leu Tyr Thr Gln Pro Glu Asp Val Asp Tyr Ala Tyr Thr 195 200 205 gaa ctg agc aaa atc agc ccg cgt ttc acc atc gca gcg tcc ttc ggt 672Glu Leu Ser Lys Ile Ser Pro Arg Phe Thr Ile Ala Ala Ser Phe Gly 210 215 220 aac gta cac ggt gtt tac aag ccg ggt aac gtg gtt ctg act ccg acc 720Asn Val His Gly Val Tyr Lys Pro Gly Asn Val Val Leu Thr Pro Thr 225 230 235 240 atc ctg cgt gat tct cag gaa tat gtt tcc aag aaa cac aac ctg ccg 768Ile Leu Arg Asp Ser Gln Glu Tyr Val Ser Lys Lys His Asn Leu Pro 245 250 255 cac aac agc ctg aac ttc gta ttc cac ggt ggt tcc ggt tct act gct 816His Asn Ser Leu Asn Phe Val Phe His Gly Gly Ser Gly Ser Thr Ala 260 265 270 cag gaa atc aaa gac tcc gta agc tac ggc gta gta aaa atg aac atc 864Gln Glu Ile Lys Asp Ser Val Ser Tyr Gly Val Val Lys Met Asn Ile 275 280 285 gat acc gat acc caa tgg gca acc tgg gaa ggc gtt ctg aac tac tac 912Asp Thr Asp Thr Gln Trp Ala Thr Trp Glu Gly Val Leu Asn Tyr Tyr 290 295 300 aaa gcg aac gaa gct tat ctg cag ggt cag ctg ggt aac ccg aaa ggc 960Lys Ala Asn Glu Ala Tyr Leu Gln Gly Gln Leu Gly Asn Pro Lys Gly 305 310 315 320 gaa gat cag ccg aac aag aaa tac tac gat ccg cgc gta tgg ctg cgt 1008Glu Asp Gln Pro Asn Lys Lys Tyr Tyr Asp Pro Arg Val Trp Leu Arg 325 330 335 gcc ggt cag act tcg atg atc gct cgt ctg gag aaa gca ttc cag gaa 1056Ala Gly Gln Thr Ser Met Ile Ala Arg Leu Glu Lys Ala Phe Gln Glu 340 345 350 ctg aac gcg atc gac gtt ctg taa 1080Leu Asn Ala Ile Asp Val Leu 355 21359PRTEscherichia coli 21Met Ser Lys Ile Phe Asp Phe Val Lys Pro Gly Val Ile Thr Gly Asp 1 5 10 15 Asp Val Gln Lys Val Phe Gln Val Ala Lys Glu Asn Asn Phe Ala Leu 20 25 30 Pro Ala Val Asn Cys Val Gly Thr Asp Ser Ile Asn Ala Val Leu Glu 35 40 45 Thr Ala Ala Lys Val Lys Ala Pro Val Ile Val Gln Phe Ser Asn Gly 50 55 60 Gly Ala Ser Phe Ile Ala Gly Lys Gly Val Lys Ser Asp Val Pro Gln 65 70 75 80 Gly Ala Ala Ile Leu Gly Ala Ile Ser Gly Ala His His Val His Gln 85 90 95 Met Ala Glu His Tyr Gly Val Pro Val Ile Leu His Thr Asp His Cys 100 105 110 Ala Lys Lys Leu Leu Pro Trp Ile Asp Gly Leu Leu Asp Ala Gly Glu 115 120 125 Lys His Phe Ala Ala Thr Gly Lys Pro Leu Phe Ser Ser His Met Ile 130 135 140 Asp Leu Ser Glu Glu Ser Leu Gln Glu Asn Ile Glu Ile Cys Ser Lys 145 150 155 160 Tyr Leu Glu Arg Met Ser Lys Ile Gly Met Thr Leu Glu Ile Glu Leu 165 170 175 Gly Cys Thr Gly Gly Glu Glu Asp Gly Val Asp Asn Ser His Met Asp 180 185 190 Ala Ser Ala Leu Tyr Thr Gln Pro Glu Asp Val Asp Tyr Ala Tyr Thr 195 200 205 Glu Leu Ser Lys Ile Ser Pro Arg Phe Thr Ile Ala Ala Ser Phe Gly 210 215 220 Asn Val His Gly Val Tyr Lys Pro Gly Asn Val Val Leu Thr Pro Thr 225 230 235 240 Ile Leu Arg Asp Ser Gln Glu Tyr Val Ser Lys Lys His Asn Leu Pro 245 250 255 His Asn Ser Leu Asn Phe Val Phe His Gly Gly Ser Gly Ser Thr Ala 260 265 270 Gln Glu Ile Lys Asp Ser Val Ser Tyr Gly Val Val Lys Met Asn Ile 275 280 285 Asp Thr Asp Thr Gln Trp Ala Thr Trp Glu Gly Val Leu Asn Tyr Tyr 290 295 300 Lys Ala Asn Glu Ala Tyr Leu Gln Gly Gln Leu Gly Asn Pro Lys Gly 305 310 315 320 Glu Asp Gln Pro Asn Lys Lys Tyr Tyr Asp Pro Arg Val Trp Leu Arg 325 330 335 Ala Gly Gln Thr Ser Met Ile Ala Arg Leu Glu Lys Ala Phe Gln Glu 340 345 350 Leu Asn Ala Ile Asp Val Leu 355 221011DNAEscherichia coliCDS(1)..(1011) 22atg aga cga gaa ctt gcc atc gaa ttt tcc cgc gtc acc gaa tca gcg 48Met Arg Arg Glu Leu Ala Ile Glu Phe Ser Arg Val Thr Glu Ser Ala 1 5 10 15 gcg ctg gct ggc tac aaa tgg tta gga cgc ggc gat aaa aac acc gcg 96Ala Leu Ala Gly Tyr Lys Trp Leu Gly Arg Gly Asp Lys Asn Thr Ala 20 25 30 gac ggc gcg gcg gta aac gcc atg cgt att atg ctc aac cag gtc aac 144Asp Gly Ala Ala Val Asn Ala Met Arg Ile Met Leu Asn Gln Val Asn 35 40 45 att gac ggc acc atc gtc att ggt gaa ggt gaa atc gac gaa gca ccg 192Ile Asp Gly Thr Ile Val Ile Gly Glu Gly Glu Ile Asp Glu Ala Pro 50 55 60 atg ctc tac att ggt gaa aaa gtc ggt act ggt cgc ggc gac gcg gta 240Met Leu Tyr Ile Gly Glu Lys Val Gly Thr Gly Arg Gly Asp Ala Val 65 70 75 80 gat att gct gtt gat ccg att gaa ggc acg cgc atg acg gcg atg ggc 288Asp Ile Ala Val Asp Pro Ile Glu Gly Thr Arg Met Thr Ala Met Gly 85 90 95 cag gct aac gcg ctg gcg gtg ctg gca gta ggc gat aaa ggc tgc ttc 336Gln Ala Asn Ala Leu Ala Val Leu Ala Val Gly Asp Lys Gly Cys Phe 100 105 110 ctc aat gcg ccg gat atg tat atg gag aag ctg att gtc ggg ccg gga 384Leu Asn Ala Pro Asp Met Tyr Met Glu Lys Leu Ile Val Gly Pro Gly 115 120 125 gcc aaa ggc acc att gat ctg aac ctg ccg ctg gcg gat aac ctg cgc 432Ala Lys Gly Thr Ile Asp Leu Asn Leu Pro Leu Ala Asp Asn Leu Arg 130 135

140 aat gta gcg gcg gcg ctc ggc aaa ccg ttg agc gaa ctg acg gta acg 480Asn Val Ala Ala Ala Leu Gly Lys Pro Leu Ser Glu Leu Thr Val Thr 145 150 155 160 att ctg gct aaa cca cgc cac gat gcc gtt atc gct gaa atg cag caa 528Ile Leu Ala Lys Pro Arg His Asp Ala Val Ile Ala Glu Met Gln Gln 165 170 175 ctc ggc gta cgc gta ttt gct att ccg gac ggc gac gtt gcg gcc tca 576Leu Gly Val Arg Val Phe Ala Ile Pro Asp Gly Asp Val Ala Ala Ser 180 185 190 att ctc acc tgt atg cca gac agc gaa gtt gac gtg ctg tac ggt att 624Ile Leu Thr Cys Met Pro Asp Ser Glu Val Asp Val Leu Tyr Gly Ile 195 200 205 ggt ggc gcg ccg gaa ggc gta gtt tct gcg gcg gtg atc cgc gca tta 672Gly Gly Ala Pro Glu Gly Val Val Ser Ala Ala Val Ile Arg Ala Leu 210 215 220 gat ggc gac atg aac ggt cgt ctg ctg gcg cgt cat gac gtc aaa ggc 720Asp Gly Asp Met Asn Gly Arg Leu Leu Ala Arg His Asp Val Lys Gly 225 230 235 240 gac aac gaa gag aat cgt cgc att ggc gag cag gag ctg gca cgc tgc 768Asp Asn Glu Glu Asn Arg Arg Ile Gly Glu Gln Glu Leu Ala Arg Cys 245 250 255 aaa gcg atg ggc atc gaa gcc ggt aaa gta ttg cgc ctg ggc gat atg 816Lys Ala Met Gly Ile Glu Ala Gly Lys Val Leu Arg Leu Gly Asp Met 260 265 270 gcg cgc agc gat aac gtc atc ttc tct gcc acc ggt att acc aaa ggc 864Ala Arg Ser Asp Asn Val Ile Phe Ser Ala Thr Gly Ile Thr Lys Gly 275 280 285 gat ctg ctg gaa ggc att agc cgc aaa ggc aat atc gcg act acc gaa 912Asp Leu Leu Glu Gly Ile Ser Arg Lys Gly Asn Ile Ala Thr Thr Glu 290 295 300 acg ctg ctg atc cgc ggc aag tca cgc acc att cgc cgc att cag tcc 960Thr Leu Leu Ile Arg Gly Lys Ser Arg Thr Ile Arg Arg Ile Gln Ser 305 310 315 320 atc cac tat ctg gat cgc aaa gac ccg gaa atg cag gtg cac atc ctc 1008Ile His Tyr Leu Asp Arg Lys Asp Pro Glu Met Gln Val His Ile Leu 325 330 335 tga 101123336PRTEscherichia coli 23Met Arg Arg Glu Leu Ala Ile Glu Phe Ser Arg Val Thr Glu Ser Ala 1 5 10 15 Ala Leu Ala Gly Tyr Lys Trp Leu Gly Arg Gly Asp Lys Asn Thr Ala 20 25 30 Asp Gly Ala Ala Val Asn Ala Met Arg Ile Met Leu Asn Gln Val Asn 35 40 45 Ile Asp Gly Thr Ile Val Ile Gly Glu Gly Glu Ile Asp Glu Ala Pro 50 55 60 Met Leu Tyr Ile Gly Glu Lys Val Gly Thr Gly Arg Gly Asp Ala Val 65 70 75 80 Asp Ile Ala Val Asp Pro Ile Glu Gly Thr Arg Met Thr Ala Met Gly 85 90 95 Gln Ala Asn Ala Leu Ala Val Leu Ala Val Gly Asp Lys Gly Cys Phe 100 105 110 Leu Asn Ala Pro Asp Met Tyr Met Glu Lys Leu Ile Val Gly Pro Gly 115 120 125 Ala Lys Gly Thr Ile Asp Leu Asn Leu Pro Leu Ala Asp Asn Leu Arg 130 135 140 Asn Val Ala Ala Ala Leu Gly Lys Pro Leu Ser Glu Leu Thr Val Thr 145 150 155 160 Ile Leu Ala Lys Pro Arg His Asp Ala Val Ile Ala Glu Met Gln Gln 165 170 175 Leu Gly Val Arg Val Phe Ala Ile Pro Asp Gly Asp Val Ala Ala Ser 180 185 190 Ile Leu Thr Cys Met Pro Asp Ser Glu Val Asp Val Leu Tyr Gly Ile 195 200 205 Gly Gly Ala Pro Glu Gly Val Val Ser Ala Ala Val Ile Arg Ala Leu 210 215 220 Asp Gly Asp Met Asn Gly Arg Leu Leu Ala Arg His Asp Val Lys Gly 225 230 235 240 Asp Asn Glu Glu Asn Arg Arg Ile Gly Glu Gln Glu Leu Ala Arg Cys 245 250 255 Lys Ala Met Gly Ile Glu Ala Gly Lys Val Leu Arg Leu Gly Asp Met 260 265 270 Ala Arg Ser Asp Asn Val Ile Phe Ser Ala Thr Gly Ile Thr Lys Gly 275 280 285 Asp Leu Leu Glu Gly Ile Ser Arg Lys Gly Asn Ile Ala Thr Thr Glu 290 295 300 Thr Leu Leu Ile Arg Gly Lys Ser Arg Thr Ile Arg Arg Ile Gln Ser 305 310 315 320 Ile His Tyr Leu Asp Arg Lys Asp Pro Glu Met Gln Val His Ile Leu 325 330 335 241509DNAEscherichia coliCDS(1)..(1509) 24atg act gaa aaa aaa tat atc gtt gcg ctc gac cag ggc acc acc agc 48Met Thr Glu Lys Lys Tyr Ile Val Ala Leu Asp Gln Gly Thr Thr Ser 1 5 10 15 tcc cgc gcg gtc gta atg gat cac gat gcc aat atc att agc gtg tcg 96Ser Arg Ala Val Val Met Asp His Asp Ala Asn Ile Ile Ser Val Ser 20 25 30 cag cgc gaa ttt gag caa atc tac cca aaa cca ggt tgg gta gaa cac 144Gln Arg Glu Phe Glu Gln Ile Tyr Pro Lys Pro Gly Trp Val Glu His 35 40 45 gac cca atg gaa atc tgg gcc acc caa agc tcc acg ctg gta gaa gtg 192Asp Pro Met Glu Ile Trp Ala Thr Gln Ser Ser Thr Leu Val Glu Val 50 55 60 ctg gcg aaa gcc gat atc agt tcc gat caa att gca gct atc ggt att 240Leu Ala Lys Ala Asp Ile Ser Ser Asp Gln Ile Ala Ala Ile Gly Ile 65 70 75 80 acg aac cag cgt gaa acc act att gtc tgg gaa aaa gaa acc ggc aag 288Thr Asn Gln Arg Glu Thr Thr Ile Val Trp Glu Lys Glu Thr Gly Lys 85 90 95 cct atc tat aac gcc att gtc tgg cag tgc cgt cgt acc gca gaa atc 336Pro Ile Tyr Asn Ala Ile Val Trp Gln Cys Arg Arg Thr Ala Glu Ile 100 105 110 tgc gag cat tta aaa cgt gac ggt tta gaa gat tat atc cgc agc aat 384Cys Glu His Leu Lys Arg Asp Gly Leu Glu Asp Tyr Ile Arg Ser Asn 115 120 125 acc ggt ctg gtg att gac ccg tac ttt tct ggc acc aaa gtg aag tgg 432Thr Gly Leu Val Ile Asp Pro Tyr Phe Ser Gly Thr Lys Val Lys Trp 130 135 140 atc ctc gac cat gtg gaa ggc tct cgc gag cgt gca cgt cgt ggt gaa 480Ile Leu Asp His Val Glu Gly Ser Arg Glu Arg Ala Arg Arg Gly Glu 145 150 155 160 ttg ctg ttt ggt acg gtt gat acg tgg ctt atc tgg aaa atg act cag 528Leu Leu Phe Gly Thr Val Asp Thr Trp Leu Ile Trp Lys Met Thr Gln 165 170 175 ggc cgt gtc cat gtg acc gat tac acc aac gcc tct cgt acc atg ttg 576Gly Arg Val His Val Thr Asp Tyr Thr Asn Ala Ser Arg Thr Met Leu 180 185 190 ttc aac atc cat acc ctg gac tgg gac gac aaa atg ctg gaa gtg ctg 624Phe Asn Ile His Thr Leu Asp Trp Asp Asp Lys Met Leu Glu Val Leu 195 200 205 gat att ccg cgc gag atg ctg cca gaa gtg cgt cgt tct tcc gaa gta 672Asp Ile Pro Arg Glu Met Leu Pro Glu Val Arg Arg Ser Ser Glu Val 210 215 220 tac ggt cag act aac att ggc ggc aaa ggc ggc acg cgt att cca atc 720Tyr Gly Gln Thr Asn Ile Gly Gly Lys Gly Gly Thr Arg Ile Pro Ile 225 230 235 240 tcc ggg atc gcc ggt gac cag cag gcc gcg ctg ttt ggt cag ttg tgc 768Ser Gly Ile Ala Gly Asp Gln Gln Ala Ala Leu Phe Gly Gln Leu Cys 245 250 255 gtg aaa gaa ggg atg gcg aag aac acc tat ggc act ggc tgc ttt atg 816Val Lys Glu Gly Met Ala Lys Asn Thr Tyr Gly Thr Gly Cys Phe Met 260 265 270 ctg atg aac act ggc gag aaa gcg gtg aaa tca gaa aac ggc ctg ctg 864Leu Met Asn Thr Gly Glu Lys Ala Val Lys Ser Glu Asn Gly Leu Leu 275 280 285 acc acc atc gcc tgc ggc ccg act ggc gaa gtg aac tat gcg ttg gaa 912Thr Thr Ile Ala Cys Gly Pro Thr Gly Glu Val Asn Tyr Ala Leu Glu 290 295 300 ggt gcg gtg ttt atg gca ggc gca tcc att cag tgg ctg cgc gat gaa 960Gly Ala Val Phe Met Ala Gly Ala Ser Ile Gln Trp Leu Arg Asp Glu 305 310 315 320 atg aag ttg att aac gac gcc tac gat tcc gaa tat ttc gcc acc aaa 1008Met Lys Leu Ile Asn Asp Ala Tyr Asp Ser Glu Tyr Phe Ala Thr Lys 325 330 335 gtg caa aac acc aat ggt gtg tat gtg gtt ccg gca ttt acc ggg ctg 1056Val Gln Asn Thr Asn Gly Val Tyr Val Val Pro Ala Phe Thr Gly Leu 340 345 350 ggt gcg ccg tac tgg gac ccg tat gcg cgc ggg gcg att ttc ggt ctg 1104Gly Ala Pro Tyr Trp Asp Pro Tyr Ala Arg Gly Ala Ile Phe Gly Leu 355 360 365 act cgt ggg gtg aac gct aac cac att ata cgc gcg acg ctg gag tct 1152Thr Arg Gly Val Asn Ala Asn His Ile Ile Arg Ala Thr Leu Glu Ser 370 375 380 att gct tat cag acg cgt gac gtg ctg gaa gcg atg cag gcc gac tct 1200Ile Ala Tyr Gln Thr Arg Asp Val Leu Glu Ala Met Gln Ala Asp Ser 385 390 395 400 ggt atc cgt ctg cac gcc ctg cgc gtg gat ggt ggc gca gta gca aac 1248Gly Ile Arg Leu His Ala Leu Arg Val Asp Gly Gly Ala Val Ala Asn 405 410 415 aat ttc ctg atg cag ttc cag tcc gat att ctc ggc acc cgc gtt gag 1296Asn Phe Leu Met Gln Phe Gln Ser Asp Ile Leu Gly Thr Arg Val Glu 420 425 430 cgc ccg gaa gtg cgc gaa gtc acc gca ttg ggt gcg gcc tat ctc gca 1344Arg Pro Glu Val Arg Glu Val Thr Ala Leu Gly Ala Ala Tyr Leu Ala 435 440 445 ggc ctg gcg gtt ggc ttc tgg cag aac ctc gac gag ctg caa gag aaa 1392Gly Leu Ala Val Gly Phe Trp Gln Asn Leu Asp Glu Leu Gln Glu Lys 450 455 460 gcg gtg att gag cgc gag ttc cgt cca ggc atc gaa acc act gag cgt 1440Ala Val Ile Glu Arg Glu Phe Arg Pro Gly Ile Glu Thr Thr Glu Arg 465 470 475 480 aat tac cgt tac gca ggc tgg aaa aaa gcg gtt aaa cgc gcg atg gcg 1488Asn Tyr Arg Tyr Ala Gly Trp Lys Lys Ala Val Lys Arg Ala Met Ala 485 490 495 tgg gaa gaa cac gac gaa taa 1509Trp Glu Glu His Asp Glu 500 25502PRTEscherichia coli 25Met Thr Glu Lys Lys Tyr Ile Val Ala Leu Asp Gln Gly Thr Thr Ser 1 5 10 15 Ser Arg Ala Val Val Met Asp His Asp Ala Asn Ile Ile Ser Val Ser 20 25 30 Gln Arg Glu Phe Glu Gln Ile Tyr Pro Lys Pro Gly Trp Val Glu His 35 40 45 Asp Pro Met Glu Ile Trp Ala Thr Gln Ser Ser Thr Leu Val Glu Val 50 55 60 Leu Ala Lys Ala Asp Ile Ser Ser Asp Gln Ile Ala Ala Ile Gly Ile 65 70 75 80 Thr Asn Gln Arg Glu Thr Thr Ile Val Trp Glu Lys Glu Thr Gly Lys 85 90 95 Pro Ile Tyr Asn Ala Ile Val Trp Gln Cys Arg Arg Thr Ala Glu Ile 100 105 110 Cys Glu His Leu Lys Arg Asp Gly Leu Glu Asp Tyr Ile Arg Ser Asn 115 120 125 Thr Gly Leu Val Ile Asp Pro Tyr Phe Ser Gly Thr Lys Val Lys Trp 130 135 140 Ile Leu Asp His Val Glu Gly Ser Arg Glu Arg Ala Arg Arg Gly Glu 145 150 155 160 Leu Leu Phe Gly Thr Val Asp Thr Trp Leu Ile Trp Lys Met Thr Gln 165 170 175 Gly Arg Val His Val Thr Asp Tyr Thr Asn Ala Ser Arg Thr Met Leu 180 185 190 Phe Asn Ile His Thr Leu Asp Trp Asp Asp Lys Met Leu Glu Val Leu 195 200 205 Asp Ile Pro Arg Glu Met Leu Pro Glu Val Arg Arg Ser Ser Glu Val 210 215 220 Tyr Gly Gln Thr Asn Ile Gly Gly Lys Gly Gly Thr Arg Ile Pro Ile 225 230 235 240 Ser Gly Ile Ala Gly Asp Gln Gln Ala Ala Leu Phe Gly Gln Leu Cys 245 250 255 Val Lys Glu Gly Met Ala Lys Asn Thr Tyr Gly Thr Gly Cys Phe Met 260 265 270 Leu Met Asn Thr Gly Glu Lys Ala Val Lys Ser Glu Asn Gly Leu Leu 275 280 285 Thr Thr Ile Ala Cys Gly Pro Thr Gly Glu Val Asn Tyr Ala Leu Glu 290 295 300 Gly Ala Val Phe Met Ala Gly Ala Ser Ile Gln Trp Leu Arg Asp Glu 305 310 315 320 Met Lys Leu Ile Asn Asp Ala Tyr Asp Ser Glu Tyr Phe Ala Thr Lys 325 330 335 Val Gln Asn Thr Asn Gly Val Tyr Val Val Pro Ala Phe Thr Gly Leu 340 345 350 Gly Ala Pro Tyr Trp Asp Pro Tyr Ala Arg Gly Ala Ile Phe Gly Leu 355 360 365 Thr Arg Gly Val Asn Ala Asn His Ile Ile Arg Ala Thr Leu Glu Ser 370 375 380 Ile Ala Tyr Gln Thr Arg Asp Val Leu Glu Ala Met Gln Ala Asp Ser 385 390 395 400 Gly Ile Arg Leu His Ala Leu Arg Val Asp Gly Gly Ala Val Ala Asn 405 410 415 Asn Phe Leu Met Gln Phe Gln Ser Asp Ile Leu Gly Thr Arg Val Glu 420 425 430 Arg Pro Glu Val Arg Glu Val Thr Ala Leu Gly Ala Ala Tyr Leu Ala 435 440 445 Gly Leu Ala Val Gly Phe Trp Gln Asn Leu Asp Glu Leu Gln Glu Lys 450 455 460 Ala Val Ile Glu Arg Glu Phe Arg Pro Gly Ile Glu Thr Thr Glu Arg 465 470 475 480 Asn Tyr Arg Tyr Ala Gly Trp Lys Lys Ala Val Lys Arg Ala Met Ala 485 490 495 Trp Glu Glu His Asp Glu 500 261629DNAEscherichia coliCDS(1)..(1629) 26atg aaa act cgc gac tcg caa tca agt gac gtg att atc att ggc ggc 48Met Lys Thr Arg Asp Ser Gln Ser Ser Asp Val Ile Ile Ile Gly Gly 1 5 10 15 ggc gca acg gga gcc ggg att gcc cgc gac tgt gcc ctg cgc ggg ctg 96Gly Ala Thr Gly Ala Gly Ile Ala Arg Asp Cys Ala Leu Arg Gly Leu 20 25 30 cgc gtg att ttg gtt gag cgc cac gac atc gca acc ggt gcc acc ggg 144Arg Val Ile Leu Val Glu Arg His Asp Ile Ala Thr Gly Ala Thr Gly 35 40 45 cgt aac cac ggc ctg ctg cac agc ggt gcg cgc tat gcg gta acc gat 192Arg Asn His Gly Leu Leu His Ser Gly Ala Arg Tyr Ala Val Thr Asp 50 55 60 gcg gaa tcg gcc cgc gaa tgc att agt gaa aac cag atc ctg aaa cgc 240Ala Glu Ser Ala Arg Glu Cys Ile Ser Glu Asn Gln Ile Leu Lys Arg 65 70 75 80 att gca cgt cac tgc gtt gaa cca acc aac ggc ctg ttt atc acc ctg 288Ile Ala Arg His Cys Val Glu Pro Thr Asn Gly Leu Phe Ile Thr Leu 85 90 95 ccg gaa gat gac ctc tcc ttc cag gcc act ttt att cgc gcc tgc gaa 336Pro Glu Asp Asp Leu Ser Phe Gln Ala Thr Phe Ile Arg Ala Cys Glu 100 105 110 gaa gca ggg atc agc gca gaa gct ata gac ccg cag caa gcg cgc att 384Glu Ala Gly Ile Ser Ala Glu Ala Ile Asp Pro Gln Gln Ala Arg Ile 115 120 125 atc gaa cct gcc gtt aac ccg gca ctg att ggc gcg gtg aaa gtt ccg 432Ile Glu Pro Ala Val Asn Pro Ala Leu Ile Gly Ala Val Lys

Val Pro 130 135 140 gat ggc acc gtt gat cca ttt cgt ctg acc gca gca aac atg ctg gat 480Asp Gly Thr Val Asp Pro Phe Arg Leu Thr Ala Ala Asn Met Leu Asp 145 150 155 160 gcc aaa gaa cac ggt gcc gtt atc ctt acc gct cat gaa gtc acg ggg 528Ala Lys Glu His Gly Ala Val Ile Leu Thr Ala His Glu Val Thr Gly 165 170 175 ctg att cgt gaa ggc gcg acg gtg tgc ggt gtt cgt gta cgt aac cat 576Leu Ile Arg Glu Gly Ala Thr Val Cys Gly Val Arg Val Arg Asn His 180 185 190 ctc acc ggc gaa act cag gcc ctt cat gca cct gtc gtg gtt aat gcc 624Leu Thr Gly Glu Thr Gln Ala Leu His Ala Pro Val Val Val Asn Ala 195 200 205 gct ggg atc tgg ggg caa cac att gcc gaa tat gcc gat ctg cgc att 672Ala Gly Ile Trp Gly Gln His Ile Ala Glu Tyr Ala Asp Leu Arg Ile 210 215 220 cgc atg ttc ccg gcg aaa gga tcg ctg ctg atc atg gat cac cgc att 720Arg Met Phe Pro Ala Lys Gly Ser Leu Leu Ile Met Asp His Arg Ile 225 230 235 240 aac cag cat gtg atc aac cgc tgc cgt aaa cct tcc gac gcc gat att 768Asn Gln His Val Ile Asn Arg Cys Arg Lys Pro Ser Asp Ala Asp Ile 245 250 255 ctg gtg cct ggc gat acc att tcg ctg att ggt acc acc tct tta cgt 816Leu Val Pro Gly Asp Thr Ile Ser Leu Ile Gly Thr Thr Ser Leu Arg 260 265 270 att gat tac aac gag att gac gat aat cga gtg acg gca gaa gag gtt 864Ile Asp Tyr Asn Glu Ile Asp Asp Asn Arg Val Thr Ala Glu Glu Val 275 280 285 gat att ctg ctg cgt gaa ggg gaa aaa ctg gcc ccc gtg atg gcg aaa 912Asp Ile Leu Leu Arg Glu Gly Glu Lys Leu Ala Pro Val Met Ala Lys 290 295 300 acg cgc att ttg cgg gcc tat tct ggc gtg cgc ccg ctg gtt gcc agc 960Thr Arg Ile Leu Arg Ala Tyr Ser Gly Val Arg Pro Leu Val Ala Ser 305 310 315 320 gat gac gac ccg agc gga cgt aac gtc agc cgt ggc atc gtg ctg ctc 1008Asp Asp Asp Pro Ser Gly Arg Asn Val Ser Arg Gly Ile Val Leu Leu 325 330 335 gac cat gct gaa cgc gat ggt ctg gac gga ttt atc acc atc acc ggt 1056Asp His Ala Glu Arg Asp Gly Leu Asp Gly Phe Ile Thr Ile Thr Gly 340 345 350 ggc aaa ctg atg acc tat cgg ctg atg gct gaa tgg gct acc gac gcg 1104Gly Lys Leu Met Thr Tyr Arg Leu Met Ala Glu Trp Ala Thr Asp Ala 355 360 365 gta tgc cgc aaa ctg ggc aac acg cgc ccc tgt acg act gcc gat ctg 1152Val Cys Arg Lys Leu Gly Asn Thr Arg Pro Cys Thr Thr Ala Asp Leu 370 375 380 gca ctg cct ggt tca caa gaa ccc gct gaa gtt acc ttg cgt aaa gtc 1200Ala Leu Pro Gly Ser Gln Glu Pro Ala Glu Val Thr Leu Arg Lys Val 385 390 395 400 atc tcc ctg cct gcc ccg ctg cgc ggt tct gcg gtt tat cgt cat ggc 1248Ile Ser Leu Pro Ala Pro Leu Arg Gly Ser Ala Val Tyr Arg His Gly 405 410 415 gat cgc acg cct gcc tgg ctg agc gaa ggc cgt ctg cac cgt agc ctg 1296Asp Arg Thr Pro Ala Trp Leu Ser Glu Gly Arg Leu His Arg Ser Leu 420 425 430 gta tgt gag tgc gaa gcg gta act gcg ggt gaa gtg cag tac gcg gta 1344Val Cys Glu Cys Glu Ala Val Thr Ala Gly Glu Val Gln Tyr Ala Val 435 440 445 gaa aat tta aac gtt aat agc ctg ctg gat tta cgc cgt cgt acc cgt 1392Glu Asn Leu Asn Val Asn Ser Leu Leu Asp Leu Arg Arg Arg Thr Arg 450 455 460 gtg ggg atg ggc acc tgc cag ggc gaa ctc tgc gcc tgc cgc gct gcc 1440Val Gly Met Gly Thr Cys Gln Gly Glu Leu Cys Ala Cys Arg Ala Ala 465 470 475 480 gga ctg ctg caa cgt ttt aac gtc acg acg tcc gcg caa tct atc gag 1488Gly Leu Leu Gln Arg Phe Asn Val Thr Thr Ser Ala Gln Ser Ile Glu 485 490 495 caa ctt tcc acc ttc ctt aac gaa cgc tgg aaa ggc gtg caa ccc atc 1536Gln Leu Ser Thr Phe Leu Asn Glu Arg Trp Lys Gly Val Gln Pro Ile 500 505 510 gcc tgg gga gat gca ctg cgc gaa agc gaa ttt acc cgc tgg gtt tat 1584Ala Trp Gly Asp Ala Leu Arg Glu Ser Glu Phe Thr Arg Trp Val Tyr 515 520 525 cag gga ttg tgt ggt ctg gag aag gag cag aaa gat gcg ctt tga 1629Gln Gly Leu Cys Gly Leu Glu Lys Glu Gln Lys Asp Ala Leu 530 535 540 27542PRTEscherichia coli 27Met Lys Thr Arg Asp Ser Gln Ser Ser Asp Val Ile Ile Ile Gly Gly 1 5 10 15 Gly Ala Thr Gly Ala Gly Ile Ala Arg Asp Cys Ala Leu Arg Gly Leu 20 25 30 Arg Val Ile Leu Val Glu Arg His Asp Ile Ala Thr Gly Ala Thr Gly 35 40 45 Arg Asn His Gly Leu Leu His Ser Gly Ala Arg Tyr Ala Val Thr Asp 50 55 60 Ala Glu Ser Ala Arg Glu Cys Ile Ser Glu Asn Gln Ile Leu Lys Arg 65 70 75 80 Ile Ala Arg His Cys Val Glu Pro Thr Asn Gly Leu Phe Ile Thr Leu 85 90 95 Pro Glu Asp Asp Leu Ser Phe Gln Ala Thr Phe Ile Arg Ala Cys Glu 100 105 110 Glu Ala Gly Ile Ser Ala Glu Ala Ile Asp Pro Gln Gln Ala Arg Ile 115 120 125 Ile Glu Pro Ala Val Asn Pro Ala Leu Ile Gly Ala Val Lys Val Pro 130 135 140 Asp Gly Thr Val Asp Pro Phe Arg Leu Thr Ala Ala Asn Met Leu Asp 145 150 155 160 Ala Lys Glu His Gly Ala Val Ile Leu Thr Ala His Glu Val Thr Gly 165 170 175 Leu Ile Arg Glu Gly Ala Thr Val Cys Gly Val Arg Val Arg Asn His 180 185 190 Leu Thr Gly Glu Thr Gln Ala Leu His Ala Pro Val Val Val Asn Ala 195 200 205 Ala Gly Ile Trp Gly Gln His Ile Ala Glu Tyr Ala Asp Leu Arg Ile 210 215 220 Arg Met Phe Pro Ala Lys Gly Ser Leu Leu Ile Met Asp His Arg Ile 225 230 235 240 Asn Gln His Val Ile Asn Arg Cys Arg Lys Pro Ser Asp Ala Asp Ile 245 250 255 Leu Val Pro Gly Asp Thr Ile Ser Leu Ile Gly Thr Thr Ser Leu Arg 260 265 270 Ile Asp Tyr Asn Glu Ile Asp Asp Asn Arg Val Thr Ala Glu Glu Val 275 280 285 Asp Ile Leu Leu Arg Glu Gly Glu Lys Leu Ala Pro Val Met Ala Lys 290 295 300 Thr Arg Ile Leu Arg Ala Tyr Ser Gly Val Arg Pro Leu Val Ala Ser 305 310 315 320 Asp Asp Asp Pro Ser Gly Arg Asn Val Ser Arg Gly Ile Val Leu Leu 325 330 335 Asp His Ala Glu Arg Asp Gly Leu Asp Gly Phe Ile Thr Ile Thr Gly 340 345 350 Gly Lys Leu Met Thr Tyr Arg Leu Met Ala Glu Trp Ala Thr Asp Ala 355 360 365 Val Cys Arg Lys Leu Gly Asn Thr Arg Pro Cys Thr Thr Ala Asp Leu 370 375 380 Ala Leu Pro Gly Ser Gln Glu Pro Ala Glu Val Thr Leu Arg Lys Val 385 390 395 400 Ile Ser Leu Pro Ala Pro Leu Arg Gly Ser Ala Val Tyr Arg His Gly 405 410 415 Asp Arg Thr Pro Ala Trp Leu Ser Glu Gly Arg Leu His Arg Ser Leu 420 425 430 Val Cys Glu Cys Glu Ala Val Thr Ala Gly Glu Val Gln Tyr Ala Val 435 440 445 Glu Asn Leu Asn Val Asn Ser Leu Leu Asp Leu Arg Arg Arg Thr Arg 450 455 460 Val Gly Met Gly Thr Cys Gln Gly Glu Leu Cys Ala Cys Arg Ala Ala 465 470 475 480 Gly Leu Leu Gln Arg Phe Asn Val Thr Thr Ser Ala Gln Ser Ile Glu 485 490 495 Gln Leu Ser Thr Phe Leu Asn Glu Arg Trp Lys Gly Val Gln Pro Ile 500 505 510 Ala Trp Gly Asp Ala Leu Arg Glu Ser Glu Phe Thr Arg Trp Val Tyr 515 520 525 Gln Gly Leu Cys Gly Leu Glu Lys Glu Gln Lys Asp Ala Leu 530 535 540 281260DNAEscherichia coliCDS(1)..(1260) 28atg cgc ttt gat act gtc att atg ggc ggc ggc ctc gcc gga tta ctc 48Met Arg Phe Asp Thr Val Ile Met Gly Gly Gly Leu Ala Gly Leu Leu 1 5 10 15 tgt ggc ctg caa ctg caa aaa cac ggc ctg cgc tgt gcc att gtc act 96Cys Gly Leu Gln Leu Gln Lys His Gly Leu Arg Cys Ala Ile Val Thr 20 25 30 cgt ggt caa agc gca ctg cat ttc tca tcc gga tcg ctg gat ttg ctg 144Arg Gly Gln Ser Ala Leu His Phe Ser Ser Gly Ser Leu Asp Leu Leu 35 40 45 agc cat ctg cca gat ggt caa ccg gtg aca gac att cac agt gga ctg 192Ser His Leu Pro Asp Gly Gln Pro Val Thr Asp Ile His Ser Gly Leu 50 55 60 gaa tct ttg cgt cag cag gca cca gcc cat cct tac tcc ctt ctc gag 240Glu Ser Leu Arg Gln Gln Ala Pro Ala His Pro Tyr Ser Leu Leu Glu 65 70 75 80 cca caa cgc gtg ctc gat ctc gct tgc cag gcg cag gca tta atc gct 288Pro Gln Arg Val Leu Asp Leu Ala Cys Gln Ala Gln Ala Leu Ile Ala 85 90 95 gaa agc ggt gcg caa ttg cag ggc agc gta gaa ctt gct cac cag cgg 336Glu Ser Gly Ala Gln Leu Gln Gly Ser Val Glu Leu Ala His Gln Arg 100 105 110 gtt acg ccg ctc ggc act ctg cgc tct acc tgg cta agt tcg cca gaa 384Val Thr Pro Leu Gly Thr Leu Arg Ser Thr Trp Leu Ser Ser Pro Glu 115 120 125 gtc ccc gtc tgg ccg ctg ccc gcg aag aaa ata tgt gta gtg gga att 432Val Pro Val Trp Pro Leu Pro Ala Lys Lys Ile Cys Val Val Gly Ile 130 135 140 agc ggc ctg atg gat ttt cag gcg cac ctt gcg gca gct tcg ttg cgt 480Ser Gly Leu Met Asp Phe Gln Ala His Leu Ala Ala Ala Ser Leu Arg 145 150 155 160 gaa ctc ggc ctt gcc gtt gaa acc gca gaa ata gag ctg ccg gaa ctg 528Glu Leu Gly Leu Ala Val Glu Thr Ala Glu Ile Glu Leu Pro Glu Leu 165 170 175 gat gtg ctg cgc aat aac gcc acc gaa ttt cgc gcg gtg aat atc gcc 576Asp Val Leu Arg Asn Asn Ala Thr Glu Phe Arg Ala Val Asn Ile Ala 180 185 190 cgt ttc ctt gat aat gaa gaa aac tgg ccg ctg tta ctt gat gcg ctt 624Arg Phe Leu Asp Asn Glu Glu Asn Trp Pro Leu Leu Leu Asp Ala Leu 195 200 205 att cct gtc gcc aat acc tgc gaa atg atc ctg atg ccc gcc tgc ttc 672Ile Pro Val Ala Asn Thr Cys Glu Met Ile Leu Met Pro Ala Cys Phe 210 215 220 ggt ctg gcc gat gac aaa ctg tgg cgt tgg ttg aat gaa aaa cta cct 720Gly Leu Ala Asp Asp Lys Leu Trp Arg Trp Leu Asn Glu Lys Leu Pro 225 230 235 240 tgt tca ctg atg ctt ttg cca acg ctg ccg cct tcc gtg ctg ggc att 768Cys Ser Leu Met Leu Leu Pro Thr Leu Pro Pro Ser Val Leu Gly Ile 245 250 255 cgt ctg caa aac cag tta cag cgc cag ttt gtg cgc cag ggt ggc gtg 816Arg Leu Gln Asn Gln Leu Gln Arg Gln Phe Val Arg Gln Gly Gly Val 260 265 270 tgg atg ccg ggc gat gaa gtg aaa aaa gtg acc tgt aaa aat ggc gta 864Trp Met Pro Gly Asp Glu Val Lys Lys Val Thr Cys Lys Asn Gly Val 275 280 285 gtg aac gaa atc tgg acc cgc aat cac gcc gat att ccg cta cgt cca 912Val Asn Glu Ile Trp Thr Arg Asn His Ala Asp Ile Pro Leu Arg Pro 290 295 300 cgt ttc gcg gtt ctc gcc agc ggc agt ttc ttt agt ggc gga ctg gta 960Arg Phe Ala Val Leu Ala Ser Gly Ser Phe Phe Ser Gly Gly Leu Val 305 310 315 320 gcg gaa cgt aac ggc att cga gag ccg att ctc ggc ctt gat gtg cta 1008Ala Glu Arg Asn Gly Ile Arg Glu Pro Ile Leu Gly Leu Asp Val Leu 325 330 335 caa acc gcc acg cgg ggt gaa tgg tat aag gga gat ttt ttt gcg ccg 1056Gln Thr Ala Thr Arg Gly Glu Trp Tyr Lys Gly Asp Phe Phe Ala Pro 340 345 350 caa ccg tgg cag cag ttc ggt gta acc act gat gag acg cta cgc ccg 1104Gln Pro Trp Gln Gln Phe Gly Val Thr Thr Asp Glu Thr Leu Arg Pro 355 360 365 tca cag gca ggg caa acc att gaa aac ctg ttt gcc atc ggt tcg gtg 1152Ser Gln Ala Gly Gln Thr Ile Glu Asn Leu Phe Ala Ile Gly Ser Val 370 375 380 ctg ggc gga ttt gat ccc atc gcc cag gga tgc ggc ggc ggt gtt tgt 1200Leu Gly Gly Phe Asp Pro Ile Ala Gln Gly Cys Gly Gly Gly Val Cys 385 390 395 400 gcc gtc agt gct tta cat gcc gct caa cag att gcc caa cgc gca gga 1248Ala Val Ser Ala Leu His Ala Ala Gln Gln Ile Ala Gln Arg Ala Gly 405 410 415 ggc caa caa tga 1260Gly Gln Gln 29419PRTEscherichia coli 29Met Arg Phe Asp Thr Val Ile Met Gly Gly Gly Leu Ala Gly Leu Leu 1 5 10 15 Cys Gly Leu Gln Leu Gln Lys His Gly Leu Arg Cys Ala Ile Val Thr 20 25 30 Arg Gly Gln Ser Ala Leu His Phe Ser Ser Gly Ser Leu Asp Leu Leu 35 40 45 Ser His Leu Pro Asp Gly Gln Pro Val Thr Asp Ile His Ser Gly Leu 50 55 60 Glu Ser Leu Arg Gln Gln Ala Pro Ala His Pro Tyr Ser Leu Leu Glu 65 70 75 80 Pro Gln Arg Val Leu Asp Leu Ala Cys Gln Ala Gln Ala Leu Ile Ala 85 90 95 Glu Ser Gly Ala Gln Leu Gln Gly Ser Val Glu Leu Ala His Gln Arg 100 105 110 Val Thr Pro Leu Gly Thr Leu Arg Ser Thr Trp Leu Ser Ser Pro Glu 115 120 125 Val Pro Val Trp Pro Leu Pro Ala Lys Lys Ile Cys Val Val Gly Ile 130 135 140 Ser Gly Leu Met Asp Phe Gln Ala His Leu Ala Ala Ala Ser Leu Arg 145 150 155 160 Glu Leu Gly Leu Ala Val Glu Thr Ala Glu Ile Glu Leu Pro Glu Leu 165 170 175 Asp Val Leu Arg Asn Asn Ala Thr Glu Phe Arg Ala Val Asn Ile Ala 180 185 190 Arg Phe Leu Asp Asn Glu Glu Asn Trp Pro Leu Leu Leu Asp Ala Leu 195 200 205 Ile Pro Val Ala Asn Thr Cys Glu Met Ile Leu Met Pro Ala Cys Phe 210 215 220 Gly Leu Ala Asp Asp Lys Leu Trp Arg Trp Leu Asn Glu Lys Leu Pro 225 230 235 240 Cys Ser Leu Met Leu Leu Pro Thr Leu Pro Pro Ser Val Leu Gly Ile 245 250 255 Arg Leu Gln Asn Gln Leu Gln Arg Gln Phe Val Arg Gln Gly Gly Val 260 265 270 Trp Met Pro Gly Asp Glu Val Lys Lys Val Thr Cys Lys Asn Gly Val 275 280 285 Val Asn Glu Ile Trp Thr Arg Asn His Ala Asp Ile Pro Leu Arg Pro 290 295 300 Arg Phe Ala Val Leu Ala Ser Gly Ser Phe Phe Ser Gly Gly Leu Val 305 310 315 320 Ala Glu Arg Asn Gly Ile Arg Glu Pro Ile Leu Gly Leu Asp Val Leu

325 330 335 Gln Thr Ala Thr Arg Gly Glu Trp Tyr Lys Gly Asp Phe Phe Ala Pro 340 345 350 Gln Pro Trp Gln Gln Phe Gly Val Thr Thr Asp Glu Thr Leu Arg Pro 355 360 365 Ser Gln Ala Gly Gln Thr Ile Glu Asn Leu Phe Ala Ile Gly Ser Val 370 375 380 Leu Gly Gly Phe Asp Pro Ile Ala Gln Gly Cys Gly Gly Gly Val Cys 385 390 395 400 Ala Val Ser Ala Leu His Ala Ala Gln Gln Ile Ala Gln Arg Ala Gly 405 410 415 Gly Gln Gln 301191DNAEscherichia coliCDS(1)..(1191) 30atg aat gac acc agc ttc gaa aac tgc att aag tgc acc gtc tgc acc 48Met Asn Asp Thr Ser Phe Glu Asn Cys Ile Lys Cys Thr Val Cys Thr 1 5 10 15 acc gcc tgc ccg gtg agc cgg gtg aat ccc ggt tat cca ggg cca aaa 96Thr Ala Cys Pro Val Ser Arg Val Asn Pro Gly Tyr Pro Gly Pro Lys 20 25 30 caa gcc ggg ccg gat ggc gag cgt ctg cgt ttg aaa gat ggc gca ctg 144Gln Ala Gly Pro Asp Gly Glu Arg Leu Arg Leu Lys Asp Gly Ala Leu 35 40 45 tat gac gag gcg ctg aaa tat tgc atc aac tgc aaa cgt tgt gaa gtc 192Tyr Asp Glu Ala Leu Lys Tyr Cys Ile Asn Cys Lys Arg Cys Glu Val 50 55 60 gcc tgc ccg tcc gat gtg aag att ggc gat att atc cag cgc gcg cgg 240Ala Cys Pro Ser Asp Val Lys Ile Gly Asp Ile Ile Gln Arg Ala Arg 65 70 75 80 gcg aaa tat gac acc acg cgc ccg tcg ctg cgt aat ttt gtg ttg agt 288Ala Lys Tyr Asp Thr Thr Arg Pro Ser Leu Arg Asn Phe Val Leu Ser 85 90 95 cat acc gac ctg atg ggt agc gtt tcc acg ccg ttc gca cca atc gtc 336His Thr Asp Leu Met Gly Ser Val Ser Thr Pro Phe Ala Pro Ile Val 100 105 110 aac acc gct acc tcg ctg aaa ccg gtg cgg cag ctg ctt gat gcg gcg 384Asn Thr Ala Thr Ser Leu Lys Pro Val Arg Gln Leu Leu Asp Ala Ala 115 120 125 tta aaa atc gat cat cgc cgc acg cta ccg aaa tac tcc ttc ggc acg 432Leu Lys Ile Asp His Arg Arg Thr Leu Pro Lys Tyr Ser Phe Gly Thr 130 135 140 ttc cgt cgc tgg tat cgc agc gtg gcg gct cag caa gca caa tat aaa 480Phe Arg Arg Trp Tyr Arg Ser Val Ala Ala Gln Gln Ala Gln Tyr Lys 145 150 155 160 gac cag gtc gct ttc ttt cac ggc tgc ttc gtt aac tac aac cat ccg 528Asp Gln Val Ala Phe Phe His Gly Cys Phe Val Asn Tyr Asn His Pro 165 170 175 cag tta ggt aaa gat tta att aaa gtg ctc aac gca atg ggt acc ggt 576Gln Leu Gly Lys Asp Leu Ile Lys Val Leu Asn Ala Met Gly Thr Gly 180 185 190 gta caa ctg ctc agc aaa gaa aaa tgc tgc ggc gta ccg cta atc gcc 624Val Gln Leu Leu Ser Lys Glu Lys Cys Cys Gly Val Pro Leu Ile Ala 195 200 205 aac ggc ttt acc gat aaa gca cgc aaa cag gca att acg aat gta gag 672Asn Gly Phe Thr Asp Lys Ala Arg Lys Gln Ala Ile Thr Asn Val Glu 210 215 220 tcg atc cgc gaa gct gtg gga gta aaa ggc att ccg gtg att gcc acc 720Ser Ile Arg Glu Ala Val Gly Val Lys Gly Ile Pro Val Ile Ala Thr 225 230 235 240 tcc tca acc tgt aca ttt gcc ctg cgc gac gaa tac ccg gaa gtg ctg 768Ser Ser Thr Cys Thr Phe Ala Leu Arg Asp Glu Tyr Pro Glu Val Leu 245 250 255 aat gtc gac aac aaa ggc ttg cgc gat cat atc gaa ctg gca acc cgc 816Asn Val Asp Asn Lys Gly Leu Arg Asp His Ile Glu Leu Ala Thr Arg 260 265 270 tgg ctg tgg cgc aag ctg gac gaa ggc aaa acg tta ccg ctg aaa ccg 864Trp Leu Trp Arg Lys Leu Asp Glu Gly Lys Thr Leu Pro Leu Lys Pro 275 280 285 ctg ccg ctg aaa gtg gtt tat cac act ccg tgc cat atg gaa aaa atg 912Leu Pro Leu Lys Val Val Tyr His Thr Pro Cys His Met Glu Lys Met 290 295 300 ggc tgg acg ctc tac acc ctg gag ctg ttg cgt aac atc ccg ggg ctt 960Gly Trp Thr Leu Tyr Thr Leu Glu Leu Leu Arg Asn Ile Pro Gly Leu 305 310 315 320 gag tta acg gtg ctg gat tcc cag tgc tgc ggt att gcg ggt act tac 1008Glu Leu Thr Val Leu Asp Ser Gln Cys Cys Gly Ile Ala Gly Thr Tyr 325 330 335 ggt ttc aaa aaa gag aac tac ccc acc tca caa gcc atc ggc gca cca 1056Gly Phe Lys Lys Glu Asn Tyr Pro Thr Ser Gln Ala Ile Gly Ala Pro 340 345 350 ctg ttc cgc cag ata gaa gaa agc ggc gca gat ctg gtg gtc acc gac 1104Leu Phe Arg Gln Ile Glu Glu Ser Gly Ala Asp Leu Val Val Thr Asp 355 360 365 tgc gaa acc tgt aaa tgg cag att gag atg tcc aca agt ctt cgc tgc 1152Cys Glu Thr Cys Lys Trp Gln Ile Glu Met Ser Thr Ser Leu Arg Cys 370 375 380 gaa cat ccg att acg cta ctg gcc cag gcg ctg gct taa 1191Glu His Pro Ile Thr Leu Leu Ala Gln Ala Leu Ala 385 390 395 31396PRTEscherichia coli 31Met Asn Asp Thr Ser Phe Glu Asn Cys Ile Lys Cys Thr Val Cys Thr 1 5 10 15 Thr Ala Cys Pro Val Ser Arg Val Asn Pro Gly Tyr Pro Gly Pro Lys 20 25 30 Gln Ala Gly Pro Asp Gly Glu Arg Leu Arg Leu Lys Asp Gly Ala Leu 35 40 45 Tyr Asp Glu Ala Leu Lys Tyr Cys Ile Asn Cys Lys Arg Cys Glu Val 50 55 60 Ala Cys Pro Ser Asp Val Lys Ile Gly Asp Ile Ile Gln Arg Ala Arg 65 70 75 80 Ala Lys Tyr Asp Thr Thr Arg Pro Ser Leu Arg Asn Phe Val Leu Ser 85 90 95 His Thr Asp Leu Met Gly Ser Val Ser Thr Pro Phe Ala Pro Ile Val 100 105 110 Asn Thr Ala Thr Ser Leu Lys Pro Val Arg Gln Leu Leu Asp Ala Ala 115 120 125 Leu Lys Ile Asp His Arg Arg Thr Leu Pro Lys Tyr Ser Phe Gly Thr 130 135 140 Phe Arg Arg Trp Tyr Arg Ser Val Ala Ala Gln Gln Ala Gln Tyr Lys 145 150 155 160 Asp Gln Val Ala Phe Phe His Gly Cys Phe Val Asn Tyr Asn His Pro 165 170 175 Gln Leu Gly Lys Asp Leu Ile Lys Val Leu Asn Ala Met Gly Thr Gly 180 185 190 Val Gln Leu Leu Ser Lys Glu Lys Cys Cys Gly Val Pro Leu Ile Ala 195 200 205 Asn Gly Phe Thr Asp Lys Ala Arg Lys Gln Ala Ile Thr Asn Val Glu 210 215 220 Ser Ile Arg Glu Ala Val Gly Val Lys Gly Ile Pro Val Ile Ala Thr 225 230 235 240 Ser Ser Thr Cys Thr Phe Ala Leu Arg Asp Glu Tyr Pro Glu Val Leu 245 250 255 Asn Val Asp Asn Lys Gly Leu Arg Asp His Ile Glu Leu Ala Thr Arg 260 265 270 Trp Leu Trp Arg Lys Leu Asp Glu Gly Lys Thr Leu Pro Leu Lys Pro 275 280 285 Leu Pro Leu Lys Val Val Tyr His Thr Pro Cys His Met Glu Lys Met 290 295 300 Gly Trp Thr Leu Tyr Thr Leu Glu Leu Leu Arg Asn Ile Pro Gly Leu 305 310 315 320 Glu Leu Thr Val Leu Asp Ser Gln Cys Cys Gly Ile Ala Gly Thr Tyr 325 330 335 Gly Phe Lys Lys Glu Asn Tyr Pro Thr Ser Gln Ala Ile Gly Ala Pro 340 345 350 Leu Phe Arg Gln Ile Glu Glu Ser Gly Ala Asp Leu Val Val Thr Asp 355 360 365 Cys Glu Thr Cys Lys Trp Gln Ile Glu Met Ser Thr Ser Leu Arg Cys 370 375 380 Glu His Pro Ile Thr Leu Leu Ala Gln Ala Leu Ala 385 390 395 321506DNAEscherichia coliCDS(1)..(1506) 32atg gaa acc aaa gat ctg att gtg ata ggg ggc ggc atc aat ggt gct 48Met Glu Thr Lys Asp Leu Ile Val Ile Gly Gly Gly Ile Asn Gly Ala 1 5 10 15 ggt atc gcg gca gac gcc gct gga cgc ggt tta tcc gtg ctg atg ctg 96Gly Ile Ala Ala Asp Ala Ala Gly Arg Gly Leu Ser Val Leu Met Leu 20 25 30 gag gcg cag gat ctc gct tgc gcg acc tct tcc gcc agt tca aaa ctc 144Glu Ala Gln Asp Leu Ala Cys Ala Thr Ser Ser Ala Ser Ser Lys Leu 35 40 45 att cac ggt ggc ctg cgc tac ctt gag cac tat gaa ttc cgc ctg gtc 192Ile His Gly Gly Leu Arg Tyr Leu Glu His Tyr Glu Phe Arg Leu Val 50 55 60 agc gag gcg ctg gct gaa cgt gaa gtg ctg ctg aaa atg gcc ccg cat 240Ser Glu Ala Leu Ala Glu Arg Glu Val Leu Leu Lys Met Ala Pro His 65 70 75 80 atc gcc ttc ccg atg cgt ttt cgc ctg cca cat cgt ccg cat ctg cgc 288Ile Ala Phe Pro Met Arg Phe Arg Leu Pro His Arg Pro His Leu Arg 85 90 95 ccg gcg tgg atg att cgc att ggt ctg ttt atg tac gat cat ctg ggt 336Pro Ala Trp Met Ile Arg Ile Gly Leu Phe Met Tyr Asp His Leu Gly 100 105 110 aaa cgc acc agc ttg ccg gga tca act ggt ttg cgt ttt ggc gca aat 384Lys Arg Thr Ser Leu Pro Gly Ser Thr Gly Leu Arg Phe Gly Ala Asn 115 120 125 tca gtg tta aaa ccg gaa att aag cgc gga ttc gaa tat tct gac tgt 432Ser Val Leu Lys Pro Glu Ile Lys Arg Gly Phe Glu Tyr Ser Asp Cys 130 135 140 tgg gta gac gac gcc cgt ctg gta ctc gcc aac gcc cag atg gtg gtg 480Trp Val Asp Asp Ala Arg Leu Val Leu Ala Asn Ala Gln Met Val Val 145 150 155 160 cgt aaa ggc ggc gaa gtg ctt act cgg act cgc gcc acc tct gct cgc 528Arg Lys Gly Gly Glu Val Leu Thr Arg Thr Arg Ala Thr Ser Ala Arg 165 170 175 cgc gaa aac ggc ctg tgg att gtg gaa gcg gaa gat atc gat acc ggc 576Arg Glu Asn Gly Leu Trp Ile Val Glu Ala Glu Asp Ile Asp Thr Gly 180 185 190 aaa aaa tat agc tgg caa gcg cgc ggc ttg gtt aac gcc acc ggc ccg 624Lys Lys Tyr Ser Trp Gln Ala Arg Gly Leu Val Asn Ala Thr Gly Pro 195 200 205 tgg gtg aaa cag ttc ttc gac gac ggg atg cat ctg cct tcg cct tat 672Trp Val Lys Gln Phe Phe Asp Asp Gly Met His Leu Pro Ser Pro Tyr 210 215 220 ggc att cgc ctg atc aaa ggc agc cat att gtg gtg ccg cgc gtg cat 720Gly Ile Arg Leu Ile Lys Gly Ser His Ile Val Val Pro Arg Val His 225 230 235 240 acc cag aag caa gcc tac att ctg caa aac gaa gat aaa cgt att gtg 768Thr Gln Lys Gln Ala Tyr Ile Leu Gln Asn Glu Asp Lys Arg Ile Val 245 250 255 ttc gtg atc ccg tgg atg gac gag ttt tcc atc atc ggc act acc gat 816Phe Val Ile Pro Trp Met Asp Glu Phe Ser Ile Ile Gly Thr Thr Asp 260 265 270 gtc gag tac aaa ggc gat ccg aaa gcg gtg aag att gaa gag agt gaa 864Val Glu Tyr Lys Gly Asp Pro Lys Ala Val Lys Ile Glu Glu Ser Glu 275 280 285 atc aat tac ctg ctg aat gtg tat aac acg cac ttt aaa aag cag tta 912Ile Asn Tyr Leu Leu Asn Val Tyr Asn Thr His Phe Lys Lys Gln Leu 290 295 300 agc cgt gac gat atc gtc tgg acc tac tcc ggt gtg cgt ccg ctg tgt 960Ser Arg Asp Asp Ile Val Trp Thr Tyr Ser Gly Val Arg Pro Leu Cys 305 310 315 320 gat gat gag tcc gac tcg ccg cag gct att acc cgt gat tac acc ctt 1008Asp Asp Glu Ser Asp Ser Pro Gln Ala Ile Thr Arg Asp Tyr Thr Leu 325 330 335 gat att cat gat gaa aat ggc aaa gca ccg ctg ctg tcg gta ttc ggc 1056Asp Ile His Asp Glu Asn Gly Lys Ala Pro Leu Leu Ser Val Phe Gly 340 345 350 ggt aag ctg acc acc tac cga aaa ctg gcg gaa cat gcg ctg gaa aaa 1104Gly Lys Leu Thr Thr Tyr Arg Lys Leu Ala Glu His Ala Leu Glu Lys 355 360 365 cta acg ccg tat tat cag ggt att ggc ccg gca tgg acg aaa gag agt 1152Leu Thr Pro Tyr Tyr Gln Gly Ile Gly Pro Ala Trp Thr Lys Glu Ser 370 375 380 gtg cta ccg ggt ggc gcc att gaa ggc gac cgc gac gat tat gcc gct 1200Val Leu Pro Gly Gly Ala Ile Glu Gly Asp Arg Asp Asp Tyr Ala Ala 385 390 395 400 cgc ctg cgc cgc cgc tat ccg ttc ctg act gaa tcg ctg gcg cgt cat 1248Arg Leu Arg Arg Arg Tyr Pro Phe Leu Thr Glu Ser Leu Ala Arg His 405 410 415 tac gct cgc act tac ggc agc aac agc gag ctg ctg ctc ggc aat gcg 1296Tyr Ala Arg Thr Tyr Gly Ser Asn Ser Glu Leu Leu Leu Gly Asn Ala 420 425 430 gga acg gta agc gat ctc ggg gaa gat ttc ggt cat gag ttc tac gaa 1344Gly Thr Val Ser Asp Leu Gly Glu Asp Phe Gly His Glu Phe Tyr Glu 435 440 445 gcg gag ctg aaa tac ctg gtg gat cac gaa tgg gtc cgc cgc gcc gac 1392Ala Glu Leu Lys Tyr Leu Val Asp His Glu Trp Val Arg Arg Ala Asp 450 455 460 gac gcc ctg tgg cgt cgc aca aaa caa ggc atg tgg cta aat gcg gat 1440Asp Ala Leu Trp Arg Arg Thr Lys Gln Gly Met Trp Leu Asn Ala Asp 465 470 475 480 caa caa tct cgt gtg agt cag tgg ctg gtg gag tat acg cag cag agg 1488Gln Gln Ser Arg Val Ser Gln Trp Leu Val Glu Tyr Thr Gln Gln Arg 485 490 495 tta tcg ctg gcg tcg taa 1506Leu Ser Leu Ala Ser 500 33501PRTEscherichia coli 33Met Glu Thr Lys Asp Leu Ile Val Ile Gly Gly Gly Ile Asn Gly Ala 1 5 10 15 Gly Ile Ala Ala Asp Ala Ala Gly Arg Gly Leu Ser Val Leu Met Leu 20 25 30 Glu Ala Gln Asp Leu Ala Cys Ala Thr Ser Ser Ala Ser Ser Lys Leu 35 40 45 Ile His Gly Gly Leu Arg Tyr Leu Glu His Tyr Glu Phe Arg Leu Val 50 55 60 Ser Glu Ala Leu Ala Glu Arg Glu Val Leu Leu Lys Met Ala Pro His 65 70 75 80 Ile Ala Phe Pro Met Arg Phe Arg Leu Pro His Arg Pro His Leu Arg 85 90 95 Pro Ala Trp Met Ile Arg Ile Gly Leu Phe Met Tyr Asp His Leu Gly 100 105 110 Lys Arg Thr Ser Leu Pro Gly Ser Thr Gly Leu Arg Phe Gly Ala Asn 115 120 125 Ser Val Leu Lys Pro Glu Ile Lys Arg Gly Phe Glu Tyr Ser Asp Cys 130 135 140 Trp Val Asp Asp Ala Arg Leu Val Leu Ala Asn Ala Gln Met Val Val 145 150 155 160 Arg Lys Gly Gly Glu Val Leu Thr Arg Thr Arg Ala Thr Ser Ala Arg 165 170 175 Arg Glu Asn Gly Leu Trp Ile Val Glu Ala Glu Asp Ile Asp Thr Gly 180 185 190 Lys Lys Tyr Ser Trp Gln Ala Arg Gly Leu Val Asn Ala Thr Gly Pro 195 200 205 Trp Val Lys Gln Phe Phe Asp Asp Gly Met His Leu Pro Ser Pro Tyr 210 215 220 Gly Ile Arg Leu Ile Lys Gly Ser His Ile Val Val Pro Arg Val His 225 230 235 240 Thr Gln Lys Gln Ala Tyr Ile Leu Gln Asn Glu Asp Lys Arg Ile Val

245 250 255 Phe Val Ile Pro Trp Met Asp Glu Phe Ser Ile Ile Gly Thr Thr Asp 260 265 270 Val Glu Tyr Lys Gly Asp Pro Lys Ala Val Lys Ile Glu Glu Ser Glu 275 280 285 Ile Asn Tyr Leu Leu Asn Val Tyr Asn Thr His Phe Lys Lys Gln Leu 290 295 300 Ser Arg Asp Asp Ile Val Trp Thr Tyr Ser Gly Val Arg Pro Leu Cys 305 310 315 320 Asp Asp Glu Ser Asp Ser Pro Gln Ala Ile Thr Arg Asp Tyr Thr Leu 325 330 335 Asp Ile His Asp Glu Asn Gly Lys Ala Pro Leu Leu Ser Val Phe Gly 340 345 350 Gly Lys Leu Thr Thr Tyr Arg Lys Leu Ala Glu His Ala Leu Glu Lys 355 360 365 Leu Thr Pro Tyr Tyr Gln Gly Ile Gly Pro Ala Trp Thr Lys Glu Ser 370 375 380 Val Leu Pro Gly Gly Ala Ile Glu Gly Asp Arg Asp Asp Tyr Ala Ala 385 390 395 400 Arg Leu Arg Arg Arg Tyr Pro Phe Leu Thr Glu Ser Leu Ala Arg His 405 410 415 Tyr Ala Arg Thr Tyr Gly Ser Asn Ser Glu Leu Leu Leu Gly Asn Ala 420 425 430 Gly Thr Val Ser Asp Leu Gly Glu Asp Phe Gly His Glu Phe Tyr Glu 435 440 445 Ala Glu Leu Lys Tyr Leu Val Asp His Glu Trp Val Arg Arg Ala Asp 450 455 460 Asp Ala Leu Trp Arg Arg Thr Lys Gln Gly Met Trp Leu Asn Ala Asp 465 470 475 480 Gln Gln Ser Arg Val Ser Gln Trp Leu Val Glu Tyr Thr Gln Gln Arg 485 490 495 Leu Ser Leu Ala Ser 500 341071DNAEscherichia coliCDS(1)..(1071) 34atg aaa aaa ttg atc aat gat gtg caa gac gta ctg gac gaa caa ctg 48Met Lys Lys Leu Ile Asn Asp Val Gln Asp Val Leu Asp Glu Gln Leu 1 5 10 15 gca gga ctg gcg aaa gcg cat cca tcg ctg aca ctg cat cag gat ccg 96Ala Gly Leu Ala Lys Ala His Pro Ser Leu Thr Leu His Gln Asp Pro 20 25 30 gtg tat gtc acc cga gct gat gcc cct gtt gca gga aaa gtc gcc ctg 144Val Tyr Val Thr Arg Ala Asp Ala Pro Val Ala Gly Lys Val Ala Leu 35 40 45 ctg tcg ggt ggc ggc agc gga cac gag ccg atg cac tgt ggt tat atc 192Leu Ser Gly Gly Gly Ser Gly His Glu Pro Met His Cys Gly Tyr Ile 50 55 60 ggt cag ggg atg ctt tcg ggg gcc tgt ccg ggc gaa att ttc acc tca 240Gly Gln Gly Met Leu Ser Gly Ala Cys Pro Gly Glu Ile Phe Thr Ser 65 70 75 80 ccg acg ccc gat aaa atc ttt gaa tgc gcc atg caa gtt gat ggc ggc 288Pro Thr Pro Asp Lys Ile Phe Glu Cys Ala Met Gln Val Asp Gly Gly 85 90 95 gaa ggt gta ctg ttg att atc aaa aat tac acc ggc gat att ctt aac 336Glu Gly Val Leu Leu Ile Ile Lys Asn Tyr Thr Gly Asp Ile Leu Asn 100 105 110 ttt gaa aca gcg acc gag tta ctg cac gat agc ggc gta aaa gtg acc 384Phe Glu Thr Ala Thr Glu Leu Leu His Asp Ser Gly Val Lys Val Thr 115 120 125 act gtg gtc att gat gac gac gtt gcg gta aaa gac agt ctt tat act 432Thr Val Val Ile Asp Asp Asp Val Ala Val Lys Asp Ser Leu Tyr Thr 130 135 140 gcc ggg cga cgc ggc gtt gcc aac acc gta tta att gaa aaa ctc gta 480Ala Gly Arg Arg Gly Val Ala Asn Thr Val Leu Ile Glu Lys Leu Val 145 150 155 160 ggc gca gcg gcg gag cgt ggc gac tca ctg gac gcc tgt gcg gaa ctg 528Gly Ala Ala Ala Glu Arg Gly Asp Ser Leu Asp Ala Cys Ala Glu Leu 165 170 175 ggg cgt aag ctg aat aat caa ggc cac tca ata ggt atc gct ctc ggt 576Gly Arg Lys Leu Asn Asn Gln Gly His Ser Ile Gly Ile Ala Leu Gly 180 185 190 gcc tgt acc gtt cct gcc gcg ggc aaa cct tct ttt acc ctg gcg gat 624Ala Cys Thr Val Pro Ala Ala Gly Lys Pro Ser Phe Thr Leu Ala Asp 195 200 205 aat gag atg gag ttt ggc gtc ggc att cat ggt gag ccg ggt att gac 672Asn Glu Met Glu Phe Gly Val Gly Ile His Gly Glu Pro Gly Ile Asp 210 215 220 cgc cgc ccc ttc tct tcc ctt gat caa acc gtc gat gaa atg ttc gac 720Arg Arg Pro Phe Ser Ser Leu Asp Gln Thr Val Asp Glu Met Phe Asp 225 230 235 240 acc ctg ctg gta aat ggc tca tac cat cgc act ttg cgt ttc tgg gat 768Thr Leu Leu Val Asn Gly Ser Tyr His Arg Thr Leu Arg Phe Trp Asp 245 250 255 tat caa caa ggc agt tgg cag gaa gaa caa caa acc aaa caa ccg ctc 816Tyr Gln Gln Gly Ser Trp Gln Glu Glu Gln Gln Thr Lys Gln Pro Leu 260 265 270 cag tct ggc gat cgg gtg att gcg ctg gtt aac aat ctt ggc gca act 864Gln Ser Gly Asp Arg Val Ile Ala Leu Val Asn Asn Leu Gly Ala Thr 275 280 285 ccg ctt tct gag ctg tac ggc gtc tat aac cgc ctg acc aca cgt tgc 912Pro Leu Ser Glu Leu Tyr Gly Val Tyr Asn Arg Leu Thr Thr Arg Cys 290 295 300 cag caa gcg gga ttg act atc gaa cgt aat tta att ggc gcg tac tgc 960Gln Gln Ala Gly Leu Thr Ile Glu Arg Asn Leu Ile Gly Ala Tyr Cys 305 310 315 320 acc tca ctg gat atg acc ggt ttc tca atc acc tta ctg aaa gtt gat 1008Thr Ser Leu Asp Met Thr Gly Phe Ser Ile Thr Leu Leu Lys Val Asp 325 330 335 gac gaa acg ctg gca ctc tgg gac gcc ccg gtc cac acc ccg gcc ctt 1056Asp Glu Thr Leu Ala Leu Trp Asp Ala Pro Val His Thr Pro Ala Leu 340 345 350 aac tgg ggt aaa taa 1071Asn Trp Gly Lys 355 35356PRTEscherichia coli 35Met Lys Lys Leu Ile Asn Asp Val Gln Asp Val Leu Asp Glu Gln Leu 1 5 10 15 Ala Gly Leu Ala Lys Ala His Pro Ser Leu Thr Leu His Gln Asp Pro 20 25 30 Val Tyr Val Thr Arg Ala Asp Ala Pro Val Ala Gly Lys Val Ala Leu 35 40 45 Leu Ser Gly Gly Gly Ser Gly His Glu Pro Met His Cys Gly Tyr Ile 50 55 60 Gly Gln Gly Met Leu Ser Gly Ala Cys Pro Gly Glu Ile Phe Thr Ser 65 70 75 80 Pro Thr Pro Asp Lys Ile Phe Glu Cys Ala Met Gln Val Asp Gly Gly 85 90 95 Glu Gly Val Leu Leu Ile Ile Lys Asn Tyr Thr Gly Asp Ile Leu Asn 100 105 110 Phe Glu Thr Ala Thr Glu Leu Leu His Asp Ser Gly Val Lys Val Thr 115 120 125 Thr Val Val Ile Asp Asp Asp Val Ala Val Lys Asp Ser Leu Tyr Thr 130 135 140 Ala Gly Arg Arg Gly Val Ala Asn Thr Val Leu Ile Glu Lys Leu Val 145 150 155 160 Gly Ala Ala Ala Glu Arg Gly Asp Ser Leu Asp Ala Cys Ala Glu Leu 165 170 175 Gly Arg Lys Leu Asn Asn Gln Gly His Ser Ile Gly Ile Ala Leu Gly 180 185 190 Ala Cys Thr Val Pro Ala Ala Gly Lys Pro Ser Phe Thr Leu Ala Asp 195 200 205 Asn Glu Met Glu Phe Gly Val Gly Ile His Gly Glu Pro Gly Ile Asp 210 215 220 Arg Arg Pro Phe Ser Ser Leu Asp Gln Thr Val Asp Glu Met Phe Asp 225 230 235 240 Thr Leu Leu Val Asn Gly Ser Tyr His Arg Thr Leu Arg Phe Trp Asp 245 250 255 Tyr Gln Gln Gly Ser Trp Gln Glu Glu Gln Gln Thr Lys Gln Pro Leu 260 265 270 Gln Ser Gly Asp Arg Val Ile Ala Leu Val Asn Asn Leu Gly Ala Thr 275 280 285 Pro Leu Ser Glu Leu Tyr Gly Val Tyr Asn Arg Leu Thr Thr Arg Cys 290 295 300 Gln Gln Ala Gly Leu Thr Ile Glu Arg Asn Leu Ile Gly Ala Tyr Cys 305 310 315 320 Thr Ser Leu Asp Met Thr Gly Phe Ser Ile Thr Leu Leu Lys Val Asp 325 330 335 Asp Glu Thr Leu Ala Leu Trp Asp Ala Pro Val His Thr Pro Ala Leu 340 345 350 Asn Trp Gly Lys 355 36633DNAEscherichia coliCDS(1)..(633) 36atg tca ctg agc aga act caa att gtt aac tgg ctc act cgt tgt ggc 48Met Ser Leu Ser Arg Thr Gln Ile Val Asn Trp Leu Thr Arg Cys Gly 1 5 10 15 gat att ttc agc acc gag agc gag tat ctt acc gga ctg gat cgc gaa 96Asp Ile Phe Ser Thr Glu Ser Glu Tyr Leu Thr Gly Leu Asp Arg Glu 20 25 30 att ggc gat gct gac cac ggg cta aat atg aac cga ggc ttt agc aaa 144Ile Gly Asp Ala Asp His Gly Leu Asn Met Asn Arg Gly Phe Ser Lys 35 40 45 gtg gtg gaa aaa ctc cct gct atc gca gat aaa gat atc ggt ttc att 192Val Val Glu Lys Leu Pro Ala Ile Ala Asp Lys Asp Ile Gly Phe Ile 50 55 60 ctc aag aat acc ggt atg acg ctg ctt tcc agc gtc ggt ggt gcc agt 240Leu Lys Asn Thr Gly Met Thr Leu Leu Ser Ser Val Gly Gly Ala Ser 65 70 75 80 ggt ccg ctg ttc ggt acc ttc ttt atc cgc gcc gca cag gcg acc cag 288Gly Pro Leu Phe Gly Thr Phe Phe Ile Arg Ala Ala Gln Ala Thr Gln 85 90 95 gca cgg caa agc ctg aca ctg gaa gag ctt tat cag atg ttc cgc gat 336Ala Arg Gln Ser Leu Thr Leu Glu Glu Leu Tyr Gln Met Phe Arg Asp 100 105 110 ggc gcg gac ggc gta atc agt cgc ggg aaa gcc gaa cct ggc gat aaa 384Gly Ala Asp Gly Val Ile Ser Arg Gly Lys Ala Glu Pro Gly Asp Lys 115 120 125 acc atg tgt gat gtg tgg gtg ccg gtg gtg gaa tcg tta cgt cag tcc 432Thr Met Cys Asp Val Trp Val Pro Val Val Glu Ser Leu Arg Gln Ser 130 135 140 agc gag caa aat ctc tct gtt ccg gtg gcg ctc gaa gct gcc agt agc 480Ser Glu Gln Asn Leu Ser Val Pro Val Ala Leu Glu Ala Ala Ser Ser 145 150 155 160 atc gcc gaa tcc gct gca caa agt acg att acg atg caa gcc cgc aaa 528Ile Ala Glu Ser Ala Ala Gln Ser Thr Ile Thr Met Gln Ala Arg Lys 165 170 175 ggc cgc gcc agt tat ctc ggt gaa cgc agt att ggt cac cag gat ccc 576Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ser Ile Gly His Gln Asp Pro 180 185 190 ggc gcg acc tcg gtg atg ttt atg atg caa atg ttg gcg tta gcc gca 624Gly Ala Thr Ser Val Met Phe Met Met Gln Met Leu Ala Leu Ala Ala 195 200 205 aaa gag taa 633Lys Glu 210 37210PRTEscherichia coli 37Met Ser Leu Ser Arg Thr Gln Ile Val Asn Trp Leu Thr Arg Cys Gly 1 5 10 15 Asp Ile Phe Ser Thr Glu Ser Glu Tyr Leu Thr Gly Leu Asp Arg Glu 20 25 30 Ile Gly Asp Ala Asp His Gly Leu Asn Met Asn Arg Gly Phe Ser Lys 35 40 45 Val Val Glu Lys Leu Pro Ala Ile Ala Asp Lys Asp Ile Gly Phe Ile 50 55 60 Leu Lys Asn Thr Gly Met Thr Leu Leu Ser Ser Val Gly Gly Ala Ser 65 70 75 80 Gly Pro Leu Phe Gly Thr Phe Phe Ile Arg Ala Ala Gln Ala Thr Gln 85 90 95 Ala Arg Gln Ser Leu Thr Leu Glu Glu Leu Tyr Gln Met Phe Arg Asp 100 105 110 Gly Ala Asp Gly Val Ile Ser Arg Gly Lys Ala Glu Pro Gly Asp Lys 115 120 125 Thr Met Cys Asp Val Trp Val Pro Val Val Glu Ser Leu Arg Gln Ser 130 135 140 Ser Glu Gln Asn Leu Ser Val Pro Val Ala Leu Glu Ala Ala Ser Ser 145 150 155 160 Ile Ala Glu Ser Ala Ala Gln Ser Thr Ile Thr Met Gln Ala Arg Lys 165 170 175 Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ser Ile Gly His Gln Asp Pro 180 185 190 Gly Ala Thr Ser Val Met Phe Met Met Gln Met Leu Ala Leu Ala Ala 195 200 205 Lys Glu 210 381419DNAEscherichia coliCDS(1)..(1419) 38atg gta aac ctg gtc ata gtt tca cat agc agc cga ctg gga gaa ggt 48Met Val Asn Leu Val Ile Val Ser His Ser Ser Arg Leu Gly Glu Gly 1 5 10 15 gtc ggt gaa tta gcc cgt cag atg tta atg agt gat agt tgt aaa atc 96Val Gly Glu Leu Ala Arg Gln Met Leu Met Ser Asp Ser Cys Lys Ile 20 25 30 gcc att gcc gcg gga att gac gat cca caa aat ccc att ggt acc gat 144Ala Ile Ala Ala Gly Ile Asp Asp Pro Gln Asn Pro Ile Gly Thr Asp 35 40 45 gcc gtc aaa gtg atg gag gcc atc gaa tct gtt gct gat gcc gac cat 192Ala Val Lys Val Met Glu Ala Ile Glu Ser Val Ala Asp Ala Asp His 50 55 60 gtg ctg gtc atg atg gat atg ggt agc gca tta ttg agt gct gaa act 240Val Leu Val Met Met Asp Met Gly Ser Ala Leu Leu Ser Ala Glu Thr 65 70 75 80 gcg ctg gaa ttg ctg gct ccc gag atc gcc gca aaa gta cgt ttg tgt 288Ala Leu Glu Leu Leu Ala Pro Glu Ile Ala Ala Lys Val Arg Leu Cys 85 90 95 gct gcg ccg ttg gtc gaa ggt aca ctg gca gca acg gtc agc gcg gcc 336Ala Ala Pro Leu Val Glu Gly Thr Leu Ala Ala Thr Val Ser Ala Ala 100 105 110 tcg ggg gcg gat atc gac aaa gtt atc ttt gac gcc atg cat gcg ctg 384Ser Gly Ala Asp Ile Asp Lys Val Ile Phe Asp Ala Met His Ala Leu 115 120 125 gaa gcc aaa cgt gaa caa ctg ggt tta ccg tcc tcc gac act gaa atc 432Glu Ala Lys Arg Glu Gln Leu Gly Leu Pro Ser Ser Asp Thr Glu Ile 130 135 140 tct gac aca tgt cct gcg tac gat gaa gaa gcc cgt tct ctg gcg gtg 480Ser Asp Thr Cys Pro Ala Tyr Asp Glu Glu Ala Arg Ser Leu Ala Val 145 150 155 160 gtc ata aaa aac cgt aac ggc ctg cat gta cgt ccg gcc tcc cgg ctg 528Val Ile Lys Asn Arg Asn Gly Leu His Val Arg Pro Ala Ser Arg Leu 165 170 175 gtt tat acc tta tcg aca ttt aat gcc gat atg ttg ctg gaa aaa aac 576Val Tyr Thr Leu Ser Thr Phe Asn Ala Asp Met Leu Leu Glu Lys Asn 180 185 190 ggc aaa tgc gtc aca cca gag agt att aac cag att gcg tta cta caa 624Gly Lys Cys Val Thr Pro Glu Ser Ile Asn Gln Ile Ala Leu Leu Gln 195 200 205 gtt cgc tat aac gat acg ctg cgc ctg att gcg aaa ggg cca gaa gct 672Val Arg Tyr Asn Asp Thr Leu Arg Leu Ile Ala Lys Gly Pro Glu Ala 210 215 220 gaa gag gca ctg atc gct ttc cgt cag ctg gct gaa gat aac ttt ggt 720Glu Glu Ala Leu Ile Ala Phe Arg Gln Leu Ala Glu Asp Asn Phe Gly 225 230 235 240 gaa acg gag gaa gtc gct cca cct act ctg cgt ccc gtt ccg cct gtt 768Glu Thr Glu Glu Val Ala Pro Pro Thr Leu Arg Pro Val Pro Pro Val 245 250 255 tcg ggt aaa gcc ttt tat tat caa cca gtt tta tgt acg gta cag gca 816Ser Gly Lys Ala Phe Tyr Tyr Gln Pro Val Leu Cys Thr Val

Gln Ala 260 265 270 aaa tca acc ctg acc gtg gaa gaa gaa caa gat cga tta cgc cag gct 864Lys Ser Thr Leu Thr Val Glu Glu Glu Gln Asp Arg Leu Arg Gln Ala 275 280 285 att gac ttc acg tta tta gat ctg atg acg tta aca gcg aaa gca gaa 912Ile Asp Phe Thr Leu Leu Asp Leu Met Thr Leu Thr Ala Lys Ala Glu 290 295 300 gcc agc ggg ctt gac gat att gcc gca atc ttt tct ggt cac cat aca 960Ala Ser Gly Leu Asp Asp Ile Ala Ala Ile Phe Ser Gly His His Thr 305 310 315 320 ctg tta gat gat ccg gaa ctg ctg gcg gcg gca agc gaa ctc ctt cag 1008Leu Leu Asp Asp Pro Glu Leu Leu Ala Ala Ala Ser Glu Leu Leu Gln 325 330 335 cat gaa cat tgc acg gca gaa tat gcc tgg cag caa gtt ctt aaa gaa 1056His Glu His Cys Thr Ala Glu Tyr Ala Trp Gln Gln Val Leu Lys Glu 340 345 350 ctt agc cag caa tac cag caa ctg gat gat gaa tat cta caa gct cgc 1104Leu Ser Gln Gln Tyr Gln Gln Leu Asp Asp Glu Tyr Leu Gln Ala Arg 355 360 365 tat att gat gtg gac gat ctt ctg cat cgc acc ctg gtc cac ctg acc 1152Tyr Ile Asp Val Asp Asp Leu Leu His Arg Thr Leu Val His Leu Thr 370 375 380 caa acg aaa gaa gaa ctc ccg cag ttt aac tcg cca act att cta ctg 1200Gln Thr Lys Glu Glu Leu Pro Gln Phe Asn Ser Pro Thr Ile Leu Leu 385 390 395 400 gcg gag aac att tat cct tcc aca gta ctg caa ctg gat ccg gcg gtt 1248Ala Glu Asn Ile Tyr Pro Ser Thr Val Leu Gln Leu Asp Pro Ala Val 405 410 415 gta aaa ggt atc tgc ctt agc gcc gga agt ccg gta tcc cac agc gcc 1296Val Lys Gly Ile Cys Leu Ser Ala Gly Ser Pro Val Ser His Ser Ala 420 425 430 cta atc gcc cgt gaa ctg ggg att ggc tgg att tgc cag cag ggt gag 1344Leu Ile Ala Arg Glu Leu Gly Ile Gly Trp Ile Cys Gln Gln Gly Glu 435 440 445 aaa ctg tat gcg ata caa cca gaa gaa acg cta acg ctg gac gtt aaa 1392Lys Leu Tyr Ala Ile Gln Pro Glu Glu Thr Leu Thr Leu Asp Val Lys 450 455 460 acg caa cgt ttc aac cgt cag ggt taa 1419Thr Gln Arg Phe Asn Arg Gln Gly 465 470 39472PRTEscherichia coli 39Met Val Asn Leu Val Ile Val Ser His Ser Ser Arg Leu Gly Glu Gly 1 5 10 15 Val Gly Glu Leu Ala Arg Gln Met Leu Met Ser Asp Ser Cys Lys Ile 20 25 30 Ala Ile Ala Ala Gly Ile Asp Asp Pro Gln Asn Pro Ile Gly Thr Asp 35 40 45 Ala Val Lys Val Met Glu Ala Ile Glu Ser Val Ala Asp Ala Asp His 50 55 60 Val Leu Val Met Met Asp Met Gly Ser Ala Leu Leu Ser Ala Glu Thr 65 70 75 80 Ala Leu Glu Leu Leu Ala Pro Glu Ile Ala Ala Lys Val Arg Leu Cys 85 90 95 Ala Ala Pro Leu Val Glu Gly Thr Leu Ala Ala Thr Val Ser Ala Ala 100 105 110 Ser Gly Ala Asp Ile Asp Lys Val Ile Phe Asp Ala Met His Ala Leu 115 120 125 Glu Ala Lys Arg Glu Gln Leu Gly Leu Pro Ser Ser Asp Thr Glu Ile 130 135 140 Ser Asp Thr Cys Pro Ala Tyr Asp Glu Glu Ala Arg Ser Leu Ala Val 145 150 155 160 Val Ile Lys Asn Arg Asn Gly Leu His Val Arg Pro Ala Ser Arg Leu 165 170 175 Val Tyr Thr Leu Ser Thr Phe Asn Ala Asp Met Leu Leu Glu Lys Asn 180 185 190 Gly Lys Cys Val Thr Pro Glu Ser Ile Asn Gln Ile Ala Leu Leu Gln 195 200 205 Val Arg Tyr Asn Asp Thr Leu Arg Leu Ile Ala Lys Gly Pro Glu Ala 210 215 220 Glu Glu Ala Leu Ile Ala Phe Arg Gln Leu Ala Glu Asp Asn Phe Gly 225 230 235 240 Glu Thr Glu Glu Val Ala Pro Pro Thr Leu Arg Pro Val Pro Pro Val 245 250 255 Ser Gly Lys Ala Phe Tyr Tyr Gln Pro Val Leu Cys Thr Val Gln Ala 260 265 270 Lys Ser Thr Leu Thr Val Glu Glu Glu Gln Asp Arg Leu Arg Gln Ala 275 280 285 Ile Asp Phe Thr Leu Leu Asp Leu Met Thr Leu Thr Ala Lys Ala Glu 290 295 300 Ala Ser Gly Leu Asp Asp Ile Ala Ala Ile Phe Ser Gly His His Thr 305 310 315 320 Leu Leu Asp Asp Pro Glu Leu Leu Ala Ala Ala Ser Glu Leu Leu Gln 325 330 335 His Glu His Cys Thr Ala Glu Tyr Ala Trp Gln Gln Val Leu Lys Glu 340 345 350 Leu Ser Gln Gln Tyr Gln Gln Leu Asp Asp Glu Tyr Leu Gln Ala Arg 355 360 365 Tyr Ile Asp Val Asp Asp Leu Leu His Arg Thr Leu Val His Leu Thr 370 375 380 Gln Thr Lys Glu Glu Leu Pro Gln Phe Asn Ser Pro Thr Ile Leu Leu 385 390 395 400 Ala Glu Asn Ile Tyr Pro Ser Thr Val Leu Gln Leu Asp Pro Ala Val 405 410 415 Val Lys Gly Ile Cys Leu Ser Ala Gly Ser Pro Val Ser His Ser Ala 420 425 430 Leu Ile Ala Arg Glu Leu Gly Ile Gly Trp Ile Cys Gln Gln Gly Glu 435 440 445 Lys Leu Tyr Ala Ile Gln Pro Glu Glu Thr Leu Thr Leu Asp Val Lys 450 455 460 Thr Gln Arg Phe Asn Arg Gln Gly 465 470 401776DNASchizosaccharomyces pombeCDS(1)..(1776) 40atg tct gta aaa caa ttt gta tct gaa gga cat ata gta cgc cca tac 48Met Ser Val Lys Gln Phe Val Ser Glu Gly His Ile Val Arg Pro Tyr 1 5 10 15 ttg ctt gga ctt gct aga agt aac cct ggc cta act gtt att gaa cat 96Leu Leu Gly Leu Ala Arg Ser Asn Pro Gly Leu Thr Val Ile Glu His 20 25 30 gat cgt gta att tac agg aca gcc tct gcc ccg ggt tct ggt gat ccg 144Asp Arg Val Ile Tyr Arg Thr Ala Ser Ala Pro Gly Ser Gly Asp Pro 35 40 45 cct aaa gta act tta gtg tct ggt ggt ggt agt ggg cac gag cct aca 192Pro Lys Val Thr Leu Val Ser Gly Gly Gly Ser Gly His Glu Pro Thr 50 55 60 cat gct ggt ttt gtt ggt gat gga gcc ttg gac gcc gta gct tgt gga 240His Ala Gly Phe Val Gly Asp Gly Ala Leu Asp Ala Val Ala Cys Gly 65 70 75 80 gac att ttt gct tct ccc tct act aaa caa att tac tct gct ctc aaa 288Asp Ile Phe Ala Ser Pro Ser Thr Lys Gln Ile Tyr Ser Ala Leu Lys 85 90 95 gct gtt gca tct cct aag gga act tta att att gtc aaa aat tac aca 336Ala Val Ala Ser Pro Lys Gly Thr Leu Ile Ile Val Lys Asn Tyr Thr 100 105 110 ggt gat att att cat ttt ggc ttg gca gct gag aga gcc aag gca gct 384Gly Asp Ile Ile His Phe Gly Leu Ala Ala Glu Arg Ala Lys Ala Ala 115 120 125 gga atg aac gtt gag ctt gtt gcc gta gga gat gat gtt tct gta ggc 432Gly Met Asn Val Glu Leu Val Ala Val Gly Asp Asp Val Ser Val Gly 130 135 140 aaa aag aga ggt gca ctc gta gga cga aga ggt tta gga gcc act gtg 480Lys Lys Arg Gly Ala Leu Val Gly Arg Arg Gly Leu Gly Ala Thr Val 145 150 155 160 cta gta cac aaa att gcg gga tct gca gca gca tta gga ctg gat ctg 528Leu Val His Lys Ile Ala Gly Ser Ala Ala Ala Leu Gly Leu Asp Leu 165 170 175 cat caa gtt gct caa gtg gcc caa tca gtg att gac aat gct gct acc 576His Gln Val Ala Gln Val Ala Gln Ser Val Ile Asp Asn Ala Ala Thr 180 185 190 ata gca gct tca ttg gat cac tgc gcc gtt ccc ggt cgc aaa ttt gaa 624Ile Ala Ala Ser Leu Asp His Cys Ala Val Pro Gly Arg Lys Phe Glu 195 200 205 aca aac ttg ggt cca gac gag tat gag att gga atg ggt att cat aac 672Thr Asn Leu Gly Pro Asp Glu Tyr Glu Ile Gly Met Gly Ile His Asn 210 215 220 gag cct gga acc ttc aaa tca tca cca ctt cca tct att ccc gag cta 720Glu Pro Gly Thr Phe Lys Ser Ser Pro Leu Pro Ser Ile Pro Glu Leu 225 230 235 240 gtt aca gag atg ctt tcg att ttg ttt ggt gag aaa aac ccg gac aat 768Val Thr Glu Met Leu Ser Ile Leu Phe Gly Glu Lys Asn Pro Asp Asn 245 250 255 agt ttc gta gag ttt tct tca aaa gac gat gtt att ctt cta gta aac 816Ser Phe Val Glu Phe Ser Ser Lys Asp Asp Val Ile Leu Leu Val Asn 260 265 270 aat atg ggt ggt atg tcc aac tta gag ttg gga tat gct act gaa gta 864Asn Met Gly Gly Met Ser Asn Leu Glu Leu Gly Tyr Ala Thr Glu Val 275 280 285 gtt tcg gaa caa tta gcc aaa cga ggt atc att cct aaa aga acc atg 912Val Ser Glu Gln Leu Ala Lys Arg Gly Ile Ile Pro Lys Arg Thr Met 290 295 300 tct ggt act ttt gta acc gca ttg aac gga ccg ggt ttt gga att aca 960Ser Gly Thr Phe Val Thr Ala Leu Asn Gly Pro Gly Phe Gly Ile Thr 305 310 315 320 ttg gtc aat gct tct aag gct act cca gat att ttc aaa tat ttt gac 1008Leu Val Asn Ala Ser Lys Ala Thr Pro Asp Ile Phe Lys Tyr Phe Asp 325 330 335 ttg cca aca act gct agt gga tgg aac gtt tct tat cat aac gca aag 1056Leu Pro Thr Thr Ala Ser Gly Trp Asn Val Ser Tyr His Asn Ala Lys 340 345 350 gac tgg gag gtt ttg gct gac ggc aag gtg cca aca gct ccc gct ttg 1104Asp Trp Glu Val Leu Ala Asp Gly Lys Val Pro Thr Ala Pro Ala Leu 355 360 365 gag cat acc cgt aat gag aag cac agc ggt gta aag gct gac cca aag 1152Glu His Thr Arg Asn Glu Lys His Ser Gly Val Lys Ala Asp Pro Lys 370 375 380 atg ttt act aaa att tta aaa gct gcc gtt gac gct atc aat gaa ttt 1200Met Phe Thr Lys Ile Leu Lys Ala Ala Val Asp Ala Ile Asn Glu Phe 385 390 395 400 gag cca aag aca act tgg tac gat acg att gca gga gat ggt gat tgt 1248Glu Pro Lys Thr Thr Trp Tyr Asp Thr Ile Ala Gly Asp Gly Asp Cys 405 410 415 gga aca acc ctt gtg aat ggt gga gag gcc atc ata aag gct att aat 1296Gly Thr Thr Leu Val Asn Gly Gly Glu Ala Ile Ile Lys Ala Ile Asn 420 425 430 gat aaa tca att cga ttg gat gat ggt gta aat ggt att gac gat ttg 1344Asp Lys Ser Ile Arg Leu Asp Asp Gly Val Asn Gly Ile Asp Asp Leu 435 440 445 gcc tat att gtt gag gat tcg atg gga ggt aca tcg ggt ggt ctt tac 1392Ala Tyr Ile Val Glu Asp Ser Met Gly Gly Thr Ser Gly Gly Leu Tyr 450 455 460 tcg att tat ttg tct gcg cta gcc aaa gga gtt cgt gag tca ggc gat 1440Ser Ile Tyr Leu Ser Ala Leu Ala Lys Gly Val Arg Glu Ser Gly Asp 465 470 475 480 tcc gaa tta tcc gtg cat acg ttt gcg ttt gca agc aag tat gca ctt 1488Ser Glu Leu Ser Val His Thr Phe Ala Phe Ala Ser Lys Tyr Ala Leu 485 490 495 gac gct ctt ttc aaa tac act agg gcc cgt aaa gga ttc cgt act ctg 1536Asp Ala Leu Phe Lys Tyr Thr Arg Ala Arg Lys Gly Phe Arg Thr Leu 500 505 510 atc gat gct att caa cca ttt gtt gaa act tta aat gaa ggt aag gga 1584Ile Asp Ala Ile Gln Pro Phe Val Glu Thr Leu Asn Glu Gly Lys Gly 515 520 525 ctt gat gct gct gcg aaa gct gcc acg gaa ggt tct gaa caa act aga 1632Leu Asp Ala Ala Ala Lys Ala Ala Thr Glu Gly Ser Glu Gln Thr Arg 530 535 540 aaa atg gat gct gtc gtt gga aga gcg tct tat gtt gct aaa gag gaa 1680Lys Met Asp Ala Val Val Gly Arg Ala Ser Tyr Val Ala Lys Glu Glu 545 550 555 560 ctt cat aag ctt gat agt gag gga ggc tta ccg gat cct ggt gcc ttt 1728Leu His Lys Leu Asp Ser Glu Gly Gly Leu Pro Asp Pro Gly Ala Phe 565 570 575 gcg tta gcg gcg atc ttg aaa gca att gtt gag gct agt gaa cat taa 1776Ala Leu Ala Ala Ile Leu Lys Ala Ile Val Glu Ala Ser Glu His 580 585 590 41591PRTSchizosaccharomyces pombe 41Met Ser Val Lys Gln Phe Val Ser Glu Gly His Ile Val Arg Pro Tyr 1 5 10 15 Leu Leu Gly Leu Ala Arg Ser Asn Pro Gly Leu Thr Val Ile Glu His 20 25 30 Asp Arg Val Ile Tyr Arg Thr Ala Ser Ala Pro Gly Ser Gly Asp Pro 35 40 45 Pro Lys Val Thr Leu Val Ser Gly Gly Gly Ser Gly His Glu Pro Thr 50 55 60 His Ala Gly Phe Val Gly Asp Gly Ala Leu Asp Ala Val Ala Cys Gly 65 70 75 80 Asp Ile Phe Ala Ser Pro Ser Thr Lys Gln Ile Tyr Ser Ala Leu Lys 85 90 95 Ala Val Ala Ser Pro Lys Gly Thr Leu Ile Ile Val Lys Asn Tyr Thr 100 105 110 Gly Asp Ile Ile His Phe Gly Leu Ala Ala Glu Arg Ala Lys Ala Ala 115 120 125 Gly Met Asn Val Glu Leu Val Ala Val Gly Asp Asp Val Ser Val Gly 130 135 140 Lys Lys Arg Gly Ala Leu Val Gly Arg Arg Gly Leu Gly Ala Thr Val 145 150 155 160 Leu Val His Lys Ile Ala Gly Ser Ala Ala Ala Leu Gly Leu Asp Leu 165 170 175 His Gln Val Ala Gln Val Ala Gln Ser Val Ile Asp Asn Ala Ala Thr 180 185 190 Ile Ala Ala Ser Leu Asp His Cys Ala Val Pro Gly Arg Lys Phe Glu 195 200 205 Thr Asn Leu Gly Pro Asp Glu Tyr Glu Ile Gly Met Gly Ile His Asn 210 215 220 Glu Pro Gly Thr Phe Lys Ser Ser Pro Leu Pro Ser Ile Pro Glu Leu 225 230 235 240 Val Thr Glu Met Leu Ser Ile Leu Phe Gly Glu Lys Asn Pro Asp Asn 245 250 255 Ser Phe Val Glu Phe Ser Ser Lys Asp Asp Val Ile Leu Leu Val Asn 260 265 270 Asn Met Gly Gly Met Ser Asn Leu Glu Leu Gly Tyr Ala Thr Glu Val 275 280 285 Val Ser Glu Gln Leu Ala Lys Arg Gly Ile Ile Pro Lys Arg Thr Met 290 295 300 Ser Gly Thr Phe Val Thr Ala Leu Asn Gly Pro Gly Phe Gly Ile Thr 305 310 315 320 Leu Val Asn Ala Ser Lys Ala Thr Pro Asp Ile Phe Lys Tyr Phe Asp 325 330 335 Leu Pro Thr Thr Ala Ser Gly Trp Asn Val Ser Tyr His Asn Ala Lys 340 345 350 Asp Trp Glu Val Leu Ala Asp Gly Lys Val Pro Thr Ala Pro Ala Leu 355 360 365 Glu His Thr Arg Asn Glu Lys His Ser Gly Val Lys Ala Asp Pro Lys 370 375 380 Met Phe Thr Lys Ile Leu Lys Ala Ala Val Asp Ala Ile Asn Glu Phe 385 390 395 400 Glu Pro Lys Thr Thr Trp Tyr Asp Thr Ile Ala Gly Asp Gly Asp Cys 405 410 415 Gly Thr Thr Leu Val Asn Gly Gly Glu Ala Ile Ile Lys Ala Ile Asn 420 425 430 Asp Lys Ser Ile Arg Leu Asp Asp

Gly Val Asn Gly Ile Asp Asp Leu 435 440 445 Ala Tyr Ile Val Glu Asp Ser Met Gly Gly Thr Ser Gly Gly Leu Tyr 450 455 460 Ser Ile Tyr Leu Ser Ala Leu Ala Lys Gly Val Arg Glu Ser Gly Asp 465 470 475 480 Ser Glu Leu Ser Val His Thr Phe Ala Phe Ala Ser Lys Tyr Ala Leu 485 490 495 Asp Ala Leu Phe Lys Tyr Thr Arg Ala Arg Lys Gly Phe Arg Thr Leu 500 505 510 Ile Asp Ala Ile Gln Pro Phe Val Glu Thr Leu Asn Glu Gly Lys Gly 515 520 525 Leu Asp Ala Ala Ala Lys Ala Ala Thr Glu Gly Ser Glu Gln Thr Arg 530 535 540 Lys Met Asp Ala Val Val Gly Arg Ala Ser Tyr Val Ala Lys Glu Glu 545 550 555 560 Leu His Lys Leu Asp Ser Glu Gly Gly Leu Pro Asp Pro Gly Ala Phe 565 570 575 Ala Leu Ala Ala Ile Leu Lys Ala Ile Val Glu Ala Ser Glu His 580 585 590 421830DNAPichia angustaCDS(1)..(1830) 42atg tcg agc aaa cac tgg aat tac aag caa gac ctg gtc cat gcg cac 48Met Ser Ser Lys His Trp Asn Tyr Lys Gln Asp Leu Val His Ala His 1 5 10 15 ctc aaa ggc ctg tgt cat gcc aat cca gac ctc caa ttc atc gaa tcc 96Leu Lys Gly Leu Cys His Ala Asn Pro Asp Leu Gln Phe Ile Glu Ser 20 25 30 gag cgt gtg gtg atc aac aag cac tcc aag ccc gac aag gtg atg atc 144Glu Arg Val Val Ile Asn Lys His Ser Lys Pro Asp Lys Val Met Ile 35 40 45 cta tct ggt gga ggg tct ggc cac gag cca ttg cac gct ggc ttt gtt 192Leu Ser Gly Gly Gly Ser Gly His Glu Pro Leu His Ala Gly Phe Val 50 55 60 ggt gaa ggc tgt ttg gac gtt gga gtg gct ggt ttt gtt ttc gcc tcg 240Gly Glu Gly Cys Leu Asp Val Gly Val Ala Gly Phe Val Phe Ala Ser 65 70 75 80 ccc tct aca aag cag att gtt tca ggt ttg aag gca aag ccc tca gac 288Pro Ser Thr Lys Gln Ile Val Ser Gly Leu Lys Ala Lys Pro Ser Asp 85 90 95 aaa ggt acg cta att gtg gtg aaa aat tac acc ggc gac att ctt cac 336Lys Gly Thr Leu Ile Val Val Lys Asn Tyr Thr Gly Asp Ile Leu His 100 105 110 ttt ggg ctt gct gca gag cgg gcc aag gcc gaa ggc gtc ccc gtg gag 384Phe Gly Leu Ala Ala Glu Arg Ala Lys Ala Glu Gly Val Pro Val Glu 115 120 125 ctg cta att gtc cag gac gac gtt tct gtg ggc aga acc aag aac gga 432Leu Leu Ile Val Gln Asp Asp Val Ser Val Gly Arg Thr Lys Asn Gly 130 135 140 atg gtg ggc aga cgc ggt ctg gcc ggt acg agt ctg gtg cac aag att 480Met Val Gly Arg Arg Gly Leu Ala Gly Thr Ser Leu Val His Lys Ile 145 150 155 160 gtc ggt gcc aag gcc gcc aag gac tcg aac aaa gcc tcg ttg agc gag 528Val Gly Ala Lys Ala Ala Lys Asp Ser Asn Lys Ala Ser Leu Ser Glu 165 170 175 gtg tac cag ctg ggc gag gcc gtg gtg gcc aat ctg gtg acc atc ggc 576Val Tyr Gln Leu Gly Glu Ala Val Val Ala Asn Leu Val Thr Ile Gly 180 185 190 gcg tcg ctc gac cac tgc aca att ccg ggt aac aga cac cac gag tcc 624Ala Ser Leu Asp His Cys Thr Ile Pro Gly Asn Arg His His Glu Ser 195 200 205 gag tcc gac gac gag gac gag cag aaa cat ctg ctc aag gag gac gag 672Glu Ser Asp Asp Glu Asp Glu Gln Lys His Leu Leu Lys Glu Asp Glu 210 215 220 atc gag gtg ggt atg ggg atc cac aac gag tcg ggc atc aag cgc gtt 720Ile Glu Val Gly Met Gly Ile His Asn Glu Ser Gly Ile Lys Arg Val 225 230 235 240 tcg cca atc ccg acc atc gac acg ctt gtg gca gac ctg ctc aag tac 768Ser Pro Ile Pro Thr Ile Asp Thr Leu Val Ala Asp Leu Leu Lys Tyr 245 250 255 ttg ctc gac aag agc gac gag gag aga cac tat gtg gac ttc gac tcg 816Leu Leu Asp Lys Ser Asp Glu Glu Arg His Tyr Val Asp Phe Asp Ser 260 265 270 tcg gac gag gtt gtg ctg atg atc aac aat ttg ggc ggc acg tcg aac 864Ser Asp Glu Val Val Leu Met Ile Asn Asn Leu Gly Gly Thr Ser Asn 275 280 285 ctc gag ctg tac gct atc cag aac act gtt gtt gag cag ctg gct acc 912Leu Glu Leu Tyr Ala Ile Gln Asn Thr Val Val Glu Gln Leu Ala Thr 290 295 300 gac tac aag atc aag ccc gca aga gtg tac acg ggc gcg tac acc acg 960Asp Tyr Lys Ile Lys Pro Ala Arg Val Tyr Thr Gly Ala Tyr Thr Thr 305 310 315 320 tcg cta gac ggt cct ggt ttt tcc atc acg ttg ctg aac gtg act cgg 1008Ser Leu Asp Gly Pro Gly Phe Ser Ile Thr Leu Leu Asn Val Thr Arg 325 330 335 gcg ggg ggc aag gag gtt ttc gat tgt ctg gac tac cca acc aag gtt 1056Ala Gly Gly Lys Glu Val Phe Asp Cys Leu Asp Tyr Pro Thr Lys Val 340 345 350 cct ggg tgg aac tcg tcg tac aca acg gca gaa tgg gcg gcg aaa tcc 1104Pro Gly Trp Asn Ser Ser Tyr Thr Thr Ala Glu Trp Ala Ala Lys Ser 355 360 365 gag tcg ttc gtc atc gac gct ccg cca gtg agc gac gcg tcg gcg acc 1152Glu Ser Phe Val Ile Asp Ala Pro Pro Val Ser Asp Ala Ser Ala Thr 370 375 380 tcg aaa gtg cgg ttc tca agc agc aca gtc aag gct gtg ttg gag agc 1200Ser Lys Val Arg Phe Ser Ser Ser Thr Val Lys Ala Val Leu Glu Ser 385 390 395 400 gga tgc aag aag ttg ctg acc aag gag cca aag atc acg ctg tac gac 1248Gly Cys Lys Lys Leu Leu Thr Lys Glu Pro Lys Ile Thr Leu Tyr Asp 405 410 415 acg gtt gcg ggc gac ggc gac tgc ggc gag acg ctg gcc aac ggc gcg 1296Thr Val Ala Gly Asp Gly Asp Cys Gly Glu Thr Leu Ala Asn Gly Ala 420 425 430 cac gcg atc ctg gac ctg ctg gct gcc gac aag ctg gag atc acc gac 1344His Ala Ile Leu Asp Leu Leu Ala Ala Asp Lys Leu Glu Ile Thr Asp 435 440 445 ggt gtc cgg agt ctg acg cag atc act gac gtc gtc gaa acg gct atg 1392Gly Val Arg Ser Leu Thr Gln Ile Thr Asp Val Val Glu Thr Ala Met 450 455 460 gga ggc acc tct ggt ggg ctt tac tcg atc ttt atc tct gca ctc gcc 1440Gly Gly Thr Ser Gly Gly Leu Tyr Ser Ile Phe Ile Ser Ala Leu Ala 465 470 475 480 aag tcg ttg aag gac aga gag ctc cag cag ggc gga tac gag gtg acg 1488Lys Ser Leu Lys Asp Arg Glu Leu Gln Gln Gly Gly Tyr Glu Val Thr 485 490 495 ccg cag atc ctg gct gca tcg ctc aag gac gcc ctg gag tcg ctg tac 1536Pro Gln Ile Leu Ala Ala Ser Leu Lys Asp Ala Leu Glu Ser Leu Tyr 500 505 510 aga tac aca cgg gcc cgt gct ggc gac cgg act ctg atc gac gcg ctt 1584Arg Tyr Thr Arg Ala Arg Ala Gly Asp Arg Thr Leu Ile Asp Ala Leu 515 520 525 gcg ccg ttt gtg gag cag ttt gcg gcc agc aag ggt gac ctc aac cag 1632Ala Pro Phe Val Glu Gln Phe Ala Ala Ser Lys Gly Asp Leu Asn Gln 530 535 540 gct aac aag gcg tgc cac gag gga gca gag tca acg cga aag ctc aag 1680Ala Asn Lys Ala Cys His Glu Gly Ala Glu Ser Thr Arg Lys Leu Lys 545 550 555 560 gct aag ttt ggc cgc gcg tcc tac gtc agc gag gag gag ttc aag ccg 1728Ala Lys Phe Gly Arg Ala Ser Tyr Val Ser Glu Glu Glu Phe Lys Pro 565 570 575 ttt gag gcc gag ggc ggg ctg ccg gat ccc ggc gcc atc ggg ctt gct 1776Phe Glu Ala Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile Gly Leu Ala 580 585 590 gcg ctg gtc gac ggt ttt gcc gag gcg tac agc aaa ata ggc tcc aac 1824Ala Leu Val Asp Gly Phe Ala Glu Ala Tyr Ser Lys Ile Gly Ser Asn 595 600 605 ttg tag 1830Leu 43609PRTPichia angusta 43Met Ser Ser Lys His Trp Asn Tyr Lys Gln Asp Leu Val His Ala His 1 5 10 15 Leu Lys Gly Leu Cys His Ala Asn Pro Asp Leu Gln Phe Ile Glu Ser 20 25 30 Glu Arg Val Val Ile Asn Lys His Ser Lys Pro Asp Lys Val Met Ile 35 40 45 Leu Ser Gly Gly Gly Ser Gly His Glu Pro Leu His Ala Gly Phe Val 50 55 60 Gly Glu Gly Cys Leu Asp Val Gly Val Ala Gly Phe Val Phe Ala Ser 65 70 75 80 Pro Ser Thr Lys Gln Ile Val Ser Gly Leu Lys Ala Lys Pro Ser Asp 85 90 95 Lys Gly Thr Leu Ile Val Val Lys Asn Tyr Thr Gly Asp Ile Leu His 100 105 110 Phe Gly Leu Ala Ala Glu Arg Ala Lys Ala Glu Gly Val Pro Val Glu 115 120 125 Leu Leu Ile Val Gln Asp Asp Val Ser Val Gly Arg Thr Lys Asn Gly 130 135 140 Met Val Gly Arg Arg Gly Leu Ala Gly Thr Ser Leu Val His Lys Ile 145 150 155 160 Val Gly Ala Lys Ala Ala Lys Asp Ser Asn Lys Ala Ser Leu Ser Glu 165 170 175 Val Tyr Gln Leu Gly Glu Ala Val Val Ala Asn Leu Val Thr Ile Gly 180 185 190 Ala Ser Leu Asp His Cys Thr Ile Pro Gly Asn Arg His His Glu Ser 195 200 205 Glu Ser Asp Asp Glu Asp Glu Gln Lys His Leu Leu Lys Glu Asp Glu 210 215 220 Ile Glu Val Gly Met Gly Ile His Asn Glu Ser Gly Ile Lys Arg Val 225 230 235 240 Ser Pro Ile Pro Thr Ile Asp Thr Leu Val Ala Asp Leu Leu Lys Tyr 245 250 255 Leu Leu Asp Lys Ser Asp Glu Glu Arg His Tyr Val Asp Phe Asp Ser 260 265 270 Ser Asp Glu Val Val Leu Met Ile Asn Asn Leu Gly Gly Thr Ser Asn 275 280 285 Leu Glu Leu Tyr Ala Ile Gln Asn Thr Val Val Glu Gln Leu Ala Thr 290 295 300 Asp Tyr Lys Ile Lys Pro Ala Arg Val Tyr Thr Gly Ala Tyr Thr Thr 305 310 315 320 Ser Leu Asp Gly Pro Gly Phe Ser Ile Thr Leu Leu Asn Val Thr Arg 325 330 335 Ala Gly Gly Lys Glu Val Phe Asp Cys Leu Asp Tyr Pro Thr Lys Val 340 345 350 Pro Gly Trp Asn Ser Ser Tyr Thr Thr Ala Glu Trp Ala Ala Lys Ser 355 360 365 Glu Ser Phe Val Ile Asp Ala Pro Pro Val Ser Asp Ala Ser Ala Thr 370 375 380 Ser Lys Val Arg Phe Ser Ser Ser Thr Val Lys Ala Val Leu Glu Ser 385 390 395 400 Gly Cys Lys Lys Leu Leu Thr Lys Glu Pro Lys Ile Thr Leu Tyr Asp 405 410 415 Thr Val Ala Gly Asp Gly Asp Cys Gly Glu Thr Leu Ala Asn Gly Ala 420 425 430 His Ala Ile Leu Asp Leu Leu Ala Ala Asp Lys Leu Glu Ile Thr Asp 435 440 445 Gly Val Arg Ser Leu Thr Gln Ile Thr Asp Val Val Glu Thr Ala Met 450 455 460 Gly Gly Thr Ser Gly Gly Leu Tyr Ser Ile Phe Ile Ser Ala Leu Ala 465 470 475 480 Lys Ser Leu Lys Asp Arg Glu Leu Gln Gln Gly Gly Tyr Glu Val Thr 485 490 495 Pro Gln Ile Leu Ala Ala Ser Leu Lys Asp Ala Leu Glu Ser Leu Tyr 500 505 510 Arg Tyr Thr Arg Ala Arg Ala Gly Asp Arg Thr Leu Ile Asp Ala Leu 515 520 525 Ala Pro Phe Val Glu Gln Phe Ala Ala Ser Lys Gly Asp Leu Asn Gln 530 535 540 Ala Asn Lys Ala Cys His Glu Gly Ala Glu Ser Thr Arg Lys Leu Lys 545 550 555 560 Ala Lys Phe Gly Arg Ala Ser Tyr Val Ser Glu Glu Glu Phe Lys Pro 565 570 575 Phe Glu Ala Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile Gly Leu Ala 580 585 590 Ala Leu Val Asp Gly Phe Ala Glu Ala Tyr Ser Lys Ile Gly Ser Asn 595 600 605 Leu 441827DNAPichia pastorisCDS(1)..(1827) 44atg tct agt aaa cat tgg gat tac aag aaa gat ctg gta ctc agc cat 48Met Ser Ser Lys His Trp Asp Tyr Lys Lys Asp Leu Val Leu Ser His 1 5 10 15 ctg gct gga tta tgt cag tcc aac ccc cat gta agg cta att gag tcc 96Leu Ala Gly Leu Cys Gln Ser Asn Pro His Val Arg Leu Ile Glu Ser 20 25 30 gaa aga gtc gtc atc tcc gcc gag aac cag gag gac aag att acc ttg 144Glu Arg Val Val Ile Ser Ala Glu Asn Gln Glu Asp Lys Ile Thr Leu 35 40 45 atc tct ggt gga ggt tca gga cac gag cct cta cat gct ggc ttt gtc 192Ile Ser Gly Gly Gly Ser Gly His Glu Pro Leu His Ala Gly Phe Val 50 55 60 acc aag gac ggt ctt ttg gat gcc gct gtg gcc ggg ttc atc ttt gcc 240Thr Lys Asp Gly Leu Leu Asp Ala Ala Val Ala Gly Phe Ile Phe Ala 65 70 75 80 tcg cca tct act aaa cag ata ttt agc gca atc aaa gcc aaa cct tcg 288Ser Pro Ser Thr Lys Gln Ile Phe Ser Ala Ile Lys Ala Lys Pro Ser 85 90 95 aag aag gga act ttg atc atc gtc aag aac tat aca gga gac att ctt 336Lys Lys Gly Thr Leu Ile Ile Val Lys Asn Tyr Thr Gly Asp Ile Leu 100 105 110 cac ttc ggt ctt gcc gcc gaa aag gcc aag gcc gaa ggt ctc aac gca 384His Phe Gly Leu Ala Ala Glu Lys Ala Lys Ala Glu Gly Leu Asn Ala 115 120 125 gaa ctg ctg att gtt cag gac gat gtc tct gtt ggt aaa gcc aag aat 432Glu Leu Leu Ile Val Gln Asp Asp Val Ser Val Gly Lys Ala Lys Asn 130 135 140 ggc ctg gta ggg cgt aga ggt ttg gct gga act tct tta gtg cac aag 480Gly Leu Val Gly Arg Arg Gly Leu Ala Gly Thr Ser Leu Val His Lys 145 150 155 160 att ttg ggt gcc aaa gct tat tta caa aag gac aac ctg gaa ttg cat 528Ile Leu Gly Ala Lys Ala Tyr Leu Gln Lys Asp Asn Leu Glu Leu His 165 170 175 cag ctg gtc act ttc ggt gag aag gtc gtt gcc aac ctg gtt aca att 576Gln Leu Val Thr Phe Gly Glu Lys Val Val Ala Asn Leu Val Thr Ile 180 185 190 ggt gct tcc ttg gac cat gtc acc att cca gcc aga gca aac aaa cag 624Gly Ala Ser Leu Asp His Val Thr Ile Pro Ala Arg Ala Asn Lys Gln 195 200 205 gag gaa gat gat tca gat gac gag cac ggc tac gaa gtg cta aag cac 672Glu Glu Asp Asp Ser Asp Asp Glu His Gly Tyr Glu Val Leu Lys His 210 215 220 gat gaa ttt gaa atc gga atg ggt att cac aac gaa cca ggt atc aag 720Asp Glu Phe Glu Ile Gly Met Gly Ile His Asn Glu Pro Gly Ile Lys 225 230 235 240 aag tcg tcg cca att cca aca gta gac gaa ttg gtg gct gag cta ctg 768Lys Ser Ser Pro Ile Pro Thr Val Asp Glu Leu Val Ala Glu Leu Leu 245 250 255 gag tac ctt ctt tcg act acc gat aag gac cga aat tac gtc caa ttt 816Glu Tyr Leu Leu Ser Thr Thr Asp Lys Asp Arg Asn Tyr Val Gln Phe 260 265 270

gac aag aat gat gaa gtt gtg cta ctg atc aat aac ttg gga gga acc 864Asp Lys Asn Asp Glu Val Val Leu Leu Ile Asn Asn Leu Gly Gly Thr 275 280 285 tca gtg ttg gaa ttg tac gct att cag aac att gtt gtc gac caa ctg 912Ser Val Leu Glu Leu Tyr Ala Ile Gln Asn Ile Val Val Asp Gln Leu 290 295 300 gcc tcc aaa tat tcc att aaa cca gtc cgc att ttc act ggc act ttc 960Ala Ser Lys Tyr Ser Ile Lys Pro Val Arg Ile Phe Thr Gly Thr Phe 305 310 315 320 acc aca tca ctg gat ggg ccc ggt ttt tct atc act tta ttg aat gct 1008Thr Thr Ser Leu Asp Gly Pro Gly Phe Ser Ile Thr Leu Leu Asn Ala 325 330 335 acc aag aca gga gat aaa gat atc cta aag ttt tta gac cac aag act 1056Thr Lys Thr Gly Asp Lys Asp Ile Leu Lys Phe Leu Asp His Lys Thr 340 345 350 agt gcc cct ggc tgg aac tcc aac ata tca gac tgg tct ggc agg gtt 1104Ser Ala Pro Gly Trp Asn Ser Asn Ile Ser Asp Trp Ser Gly Arg Val 355 360 365 gac aat ttt att gtg gct gcc cca gaa ata gac gaa gga gac agt tca 1152Asp Asn Phe Ile Val Ala Ala Pro Glu Ile Asp Glu Gly Asp Ser Ser 370 375 380 tct aag gta tct gtt gat gct aag ctg tat gct gac ctt ctg gag tct 1200Ser Lys Val Ser Val Asp Ala Lys Leu Tyr Ala Asp Leu Leu Glu Ser 385 390 395 400 ggt gtg aag aag gtc att tca aaa gag cca aag atc aca ttg tat gac 1248Gly Val Lys Lys Val Ile Ser Lys Glu Pro Lys Ile Thr Leu Tyr Asp 405 410 415 act gtt gca gga gat ggt gat tgt ggt gaa acg ttg gcg aat ggt tcc 1296Thr Val Ala Gly Asp Gly Asp Cys Gly Glu Thr Leu Ala Asn Gly Ser 420 425 430 aat gcc att tta aag gct ctg gct gaa gga aag ctt gat ctc aaa gac 1344Asn Ala Ile Leu Lys Ala Leu Ala Glu Gly Lys Leu Asp Leu Lys Asp 435 440 445 ggt gtt aaa tca ctg gtg caa att aca gac atc gtg gaa act gcc atg 1392Gly Val Lys Ser Leu Val Gln Ile Thr Asp Ile Val Glu Thr Ala Met 450 455 460 ggt gga aca tct gga ggt ctg tac tcc att ttc atc agc gct tta gca 1440Gly Gly Thr Ser Gly Gly Leu Tyr Ser Ile Phe Ile Ser Ala Leu Ala 465 470 475 480 aag tct ttg aaa gag aag gaa ctt tcc gag ggt gcc tac aca ctg acc 1488Lys Ser Leu Lys Glu Lys Glu Leu Ser Glu Gly Ala Tyr Thr Leu Thr 485 490 495 ctt gaa acg atc tct gga tcc tta cag gca gca ctt cag tct cta ttc 1536Leu Glu Thr Ile Ser Gly Ser Leu Gln Ala Ala Leu Gln Ser Leu Phe 500 505 510 aaa tac aca aga gca cgt act gga gac aga act ctt att gac gct ttg 1584Lys Tyr Thr Arg Ala Arg Thr Gly Asp Arg Thr Leu Ile Asp Ala Leu 515 520 525 gag cca ttt gta aag gaa ttc gcc aag tct aag gat ctg aaa ctt gca 1632Glu Pro Phe Val Lys Glu Phe Ala Lys Ser Lys Asp Leu Lys Leu Ala 530 535 540 aac aaa gct gcc cat gat ggt gct gaa gcc aca aga aag ctc gaa gcc 1680Asn Lys Ala Ala His Asp Gly Ala Glu Ala Thr Arg Lys Leu Glu Ala 545 550 555 560 aag ttt gga aga gca tct tat gtt gcc gaa gaa gag ttc aaa caa ttc 1728Lys Phe Gly Arg Ala Ser Tyr Val Ala Glu Glu Glu Phe Lys Gln Phe 565 570 575 gaa agt gaa ggt gga cta cct gat cct ggt gct att ggt ctt gcc gct 1776Glu Ser Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile Gly Leu Ala Ala 580 585 590 ttg att tca gga att act gat gca tac ttc aaa tct gaa acc aag ttg 1824Leu Ile Ser Gly Ile Thr Asp Ala Tyr Phe Lys Ser Glu Thr Lys Leu 595 600 605 tag 182745608PRTPichia pastoris 45Met Ser Ser Lys His Trp Asp Tyr Lys Lys Asp Leu Val Leu Ser His 1 5 10 15 Leu Ala Gly Leu Cys Gln Ser Asn Pro His Val Arg Leu Ile Glu Ser 20 25 30 Glu Arg Val Val Ile Ser Ala Glu Asn Gln Glu Asp Lys Ile Thr Leu 35 40 45 Ile Ser Gly Gly Gly Ser Gly His Glu Pro Leu His Ala Gly Phe Val 50 55 60 Thr Lys Asp Gly Leu Leu Asp Ala Ala Val Ala Gly Phe Ile Phe Ala 65 70 75 80 Ser Pro Ser Thr Lys Gln Ile Phe Ser Ala Ile Lys Ala Lys Pro Ser 85 90 95 Lys Lys Gly Thr Leu Ile Ile Val Lys Asn Tyr Thr Gly Asp Ile Leu 100 105 110 His Phe Gly Leu Ala Ala Glu Lys Ala Lys Ala Glu Gly Leu Asn Ala 115 120 125 Glu Leu Leu Ile Val Gln Asp Asp Val Ser Val Gly Lys Ala Lys Asn 130 135 140 Gly Leu Val Gly Arg Arg Gly Leu Ala Gly Thr Ser Leu Val His Lys 145 150 155 160 Ile Leu Gly Ala Lys Ala Tyr Leu Gln Lys Asp Asn Leu Glu Leu His 165 170 175 Gln Leu Val Thr Phe Gly Glu Lys Val Val Ala Asn Leu Val Thr Ile 180 185 190 Gly Ala Ser Leu Asp His Val Thr Ile Pro Ala Arg Ala Asn Lys Gln 195 200 205 Glu Glu Asp Asp Ser Asp Asp Glu His Gly Tyr Glu Val Leu Lys His 210 215 220 Asp Glu Phe Glu Ile Gly Met Gly Ile His Asn Glu Pro Gly Ile Lys 225 230 235 240 Lys Ser Ser Pro Ile Pro Thr Val Asp Glu Leu Val Ala Glu Leu Leu 245 250 255 Glu Tyr Leu Leu Ser Thr Thr Asp Lys Asp Arg Asn Tyr Val Gln Phe 260 265 270 Asp Lys Asn Asp Glu Val Val Leu Leu Ile Asn Asn Leu Gly Gly Thr 275 280 285 Ser Val Leu Glu Leu Tyr Ala Ile Gln Asn Ile Val Val Asp Gln Leu 290 295 300 Ala Ser Lys Tyr Ser Ile Lys Pro Val Arg Ile Phe Thr Gly Thr Phe 305 310 315 320 Thr Thr Ser Leu Asp Gly Pro Gly Phe Ser Ile Thr Leu Leu Asn Ala 325 330 335 Thr Lys Thr Gly Asp Lys Asp Ile Leu Lys Phe Leu Asp His Lys Thr 340 345 350 Ser Ala Pro Gly Trp Asn Ser Asn Ile Ser Asp Trp Ser Gly Arg Val 355 360 365 Asp Asn Phe Ile Val Ala Ala Pro Glu Ile Asp Glu Gly Asp Ser Ser 370 375 380 Ser Lys Val Ser Val Asp Ala Lys Leu Tyr Ala Asp Leu Leu Glu Ser 385 390 395 400 Gly Val Lys Lys Val Ile Ser Lys Glu Pro Lys Ile Thr Leu Tyr Asp 405 410 415 Thr Val Ala Gly Asp Gly Asp Cys Gly Glu Thr Leu Ala Asn Gly Ser 420 425 430 Asn Ala Ile Leu Lys Ala Leu Ala Glu Gly Lys Leu Asp Leu Lys Asp 435 440 445 Gly Val Lys Ser Leu Val Gln Ile Thr Asp Ile Val Glu Thr Ala Met 450 455 460 Gly Gly Thr Ser Gly Gly Leu Tyr Ser Ile Phe Ile Ser Ala Leu Ala 465 470 475 480 Lys Ser Leu Lys Glu Lys Glu Leu Ser Glu Gly Ala Tyr Thr Leu Thr 485 490 495 Leu Glu Thr Ile Ser Gly Ser Leu Gln Ala Ala Leu Gln Ser Leu Phe 500 505 510 Lys Tyr Thr Arg Ala Arg Thr Gly Asp Arg Thr Leu Ile Asp Ala Leu 515 520 525 Glu Pro Phe Val Lys Glu Phe Ala Lys Ser Lys Asp Leu Lys Leu Ala 530 535 540 Asn Lys Ala Ala His Asp Gly Ala Glu Ala Thr Arg Lys Leu Glu Ala 545 550 555 560 Lys Phe Gly Arg Ala Ser Tyr Val Ala Glu Glu Glu Phe Lys Gln Phe 565 570 575 Glu Ser Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile Gly Leu Ala Ala 580 585 590 Leu Ile Ser Gly Ile Thr Asp Ala Tyr Phe Lys Ser Glu Thr Lys Leu 595 600 605 461824DNADebaryomyces hanseniiCDS(1)..(1824) 46atg tcg tta gct aaa cac tgg gga tac tca aag gat ttg gtt ttg gaa 48Met Ser Leu Ala Lys His Trp Gly Tyr Ser Lys Asp Leu Val Leu Glu 1 5 10 15 aat tta aag ggt ttg gct gct gca aac ccc aaa att tct ctt ata cca 96Asn Leu Lys Gly Leu Ala Ala Ala Asn Pro Lys Ile Ser Leu Ile Pro 20 25 30 gca gaa aaa aca gtc gtg tat aat gat tcc tta caa tct aaa gga aac 144Ala Glu Lys Thr Val Val Tyr Asn Asp Ser Leu Gln Ser Lys Gly Asn 35 40 45 aag aat att aat cgt ata atg gtt att tct gga gga ggt tca ggc cat 192Lys Asn Ile Asn Arg Ile Met Val Ile Ser Gly Gly Gly Ser Gly His 50 55 60 gaa ccg tta cat gcg gga ttt gtt ggt gta aat gca tta gat gct gct 240Glu Pro Leu His Ala Gly Phe Val Gly Val Asn Ala Leu Asp Ala Ala 65 70 75 80 gta tct ggt tca ata ttt gcc tcc cct tca gcc aag cag att ttt gca 288Val Ser Gly Ser Ile Phe Ala Ser Pro Ser Ala Lys Gln Ile Phe Ala 85 90 95 gcc att aag tca att agc tcc aaa caa aac aat tct aaa ggt act ttg 336Ala Ile Lys Ser Ile Ser Ser Lys Gln Asn Asn Ser Lys Gly Thr Leu 100 105 110 gta att gtc aaa aat tat aca gga gat gtt cta cat ttt gga ctt gct 384Val Ile Val Lys Asn Tyr Thr Gly Asp Val Leu His Phe Gly Leu Ala 115 120 125 gtc gaa aga gca aaa gca cat ggc tac aaa ata gac atg ata att gtt 432Val Glu Arg Ala Lys Ala His Gly Tyr Lys Ile Asp Met Ile Ile Val 130 135 140 ggt gat gac gca gct gta ggt agg tca aag ggt gga atg gtt gga aga 480Gly Asp Asp Ala Ala Val Gly Arg Ser Lys Gly Gly Met Val Gly Arg 145 150 155 160 aga gca ttg gca gcc act gca ttg gtt cac aaa att gtt gga tct gct 528Arg Ala Leu Ala Ala Thr Ala Leu Val His Lys Ile Val Gly Ser Ala 165 170 175 gct tct gaa att gaa gat cta agc aga ctt aaa ata ttg ggt gat tcc 576Ala Ser Glu Ile Glu Asp Leu Ser Arg Leu Lys Ile Leu Gly Asp Ser 180 185 190 gtt gcg aat aat acg gtg acc att ggt gcc acc tta gat cat tgc tct 624Val Ala Asn Asn Thr Val Thr Ile Gly Ala Thr Leu Asp His Cys Ser 195 200 205 gtt cct ggg cgt gat att gca aac ttt gag cct att ggc cag aat gat 672Val Pro Gly Arg Asp Ile Ala Asn Phe Glu Pro Ile Gly Gln Asn Asp 210 215 220 gct gaa ata ggt cta ggg ata cat aac gaa act tcg gtc aag aag gta 720Ala Glu Ile Gly Leu Gly Ile His Asn Glu Thr Ser Val Lys Lys Val 225 230 235 240 aac cct gta cca atg ata gac tca tta gtt cag gac tta tta gaa ttc 768Asn Pro Val Pro Met Ile Asp Ser Leu Val Gln Asp Leu Leu Glu Phe 245 250 255 cta tta aac gaa aat gac aaa gat cgt tac ttt gta cca ttt gat ctc 816Leu Leu Asn Glu Asn Asp Lys Asp Arg Tyr Phe Val Pro Phe Asp Leu 260 265 270 agt aat gat gaa acg gtc ttg ctt gtc aac aat ctc ggg ggt aca tct 864Ser Asn Asp Glu Thr Val Leu Leu Val Asn Asn Leu Gly Gly Thr Ser 275 280 285 act tta gaa atg tat gct att aca aat tgc gtt atc gaa aca tta tac 912Thr Leu Glu Met Tyr Ala Ile Thr Asn Cys Val Ile Glu Thr Leu Tyr 290 295 300 caa caa tac agt ttg aga cca aaa aaa gtg ata gtg gga gaa ttt gct 960Gln Gln Tyr Ser Leu Arg Pro Lys Lys Val Ile Val Gly Glu Phe Ala 305 310 315 320 acg tct tta aat gcc cct ggg ttt tcg att acc tta ctt aac gtc tct 1008Thr Ser Leu Asn Ala Pro Gly Phe Ser Ile Thr Leu Leu Asn Val Ser 325 330 335 tgt gca tct aaa caa tcc caa att tcc att tca cat ata atg agt tac 1056Cys Ala Ser Lys Gln Ser Gln Ile Ser Ile Ser His Ile Met Ser Tyr 340 345 350 ttg gat ttg cca aca gat gcc cct ggt tgg aag gca cat ccg tgt ggg 1104Leu Asp Leu Pro Thr Asp Ala Pro Gly Trp Lys Ala His Pro Cys Gly 355 360 365 ttt gga ctt gaa aga gac atc aat att gag aca tca atc aat ggt att 1152Phe Gly Leu Glu Arg Asp Ile Asn Ile Glu Thr Ser Ile Asn Gly Ile 370 375 380 gat tct ttt gtc aag tca caa tta aag ctt tcc aga gaa caa cag acg 1200Asp Ser Phe Val Lys Ser Gln Leu Lys Leu Ser Arg Glu Gln Gln Thr 385 390 395 400 gac ttt aga agc agt cta gtt aat ggg ttg gaa aaa tta tta gac aaa 1248Asp Phe Arg Ser Ser Leu Val Asn Gly Leu Glu Lys Leu Leu Asp Lys 405 410 415 gaa cca agc att aca ttt tat gat act gtt gct ggt gat ggt gac tgt 1296Glu Pro Ser Ile Thr Phe Tyr Asp Thr Val Ala Gly Asp Gly Asp Cys 420 425 430 ggt gaa acc tta gcg tct ggt gca aat gga ata ttg gaa tca tta agg 1344Gly Glu Thr Leu Ala Ser Gly Ala Asn Gly Ile Leu Glu Ser Leu Arg 435 440 445 aac aac gaa atc tgc ttt gaa gat cca gtt tat tcc ata tct caa ata 1392Asn Asn Glu Ile Cys Phe Glu Asp Pro Val Tyr Ser Ile Ser Gln Ile 450 455 460 gca aac att gta gag gat aaa atg ggc gga act tca gga ggc tta tat 1440Ala Asn Ile Val Glu Asp Lys Met Gly Gly Thr Ser Gly Gly Leu Tyr 465 470 475 480 tca att ttc tta acc tcg ttg ata aaa cac ctt caa gat tgt act aca 1488Ser Ile Phe Leu Thr Ser Leu Ile Lys His Leu Gln Asp Cys Thr Thr 485 490 495 ttg aac tta tgt gaa atg ttt gct agt tct ttg cat aat gcg cta tat 1536Leu Asn Leu Cys Glu Met Phe Ala Ser Ser Leu His Asn Ala Leu Tyr 500 505 510 cag ggc tta tat aaa tac act agg gca cga gtg ggt gga aga act ttg 1584Gln Gly Leu Tyr Lys Tyr Thr Arg Ala Arg Val Gly Gly Arg Thr Leu 515 520 525 att gat gct tta gag ccg ttt gtg aat acc ttc aac gac act cta aat 1632Ile Asp Ala Leu Glu Pro Phe Val Asn Thr Phe Asn Asp Thr Leu Asn 530 535 540 ttc tca aag gct gcc cag gct gct atc gat gga tct gaa tcg act agg 1680Phe Ser Lys Ala Ala Gln Ala Ala Ile Asp Gly Ser Glu Ser Thr Arg 545 550 555 560 aaa tta gct gca aaa ttt ggg aga gcg tct tat gtc aat gaa caa gaa 1728Lys Leu Ala Ala Lys Phe Gly Arg Ala Ser Tyr Val Asn Glu Gln Glu 565 570 575 ttt aaa cag ttc gac gaa gaa gga ggc tta ccg gat ccg gga gct att 1776Phe Lys Gln Phe Asp Glu Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile 580 585 590 gga tta gcc acc tta att gct ggg ttt gcc ggt gtt gac tat aat taa 1824Gly Leu Ala Thr Leu Ile Ala Gly Phe Ala Gly Val Asp Tyr Asn 595 600 605 47607PRTDebaryomyces hansenii 47Met Ser Leu Ala Lys His Trp Gly Tyr Ser Lys Asp Leu Val Leu Glu 1 5 10 15 Asn Leu Lys Gly Leu Ala Ala Ala Asn Pro Lys Ile Ser Leu Ile Pro 20 25 30 Ala Glu Lys Thr Val Val Tyr Asn Asp Ser Leu Gln Ser Lys Gly Asn 35 40 45 Lys Asn Ile Asn Arg Ile

Met Val Ile Ser Gly Gly Gly Ser Gly His 50 55 60 Glu Pro Leu His Ala Gly Phe Val Gly Val Asn Ala Leu Asp Ala Ala 65 70 75 80 Val Ser Gly Ser Ile Phe Ala Ser Pro Ser Ala Lys Gln Ile Phe Ala 85 90 95 Ala Ile Lys Ser Ile Ser Ser Lys Gln Asn Asn Ser Lys Gly Thr Leu 100 105 110 Val Ile Val Lys Asn Tyr Thr Gly Asp Val Leu His Phe Gly Leu Ala 115 120 125 Val Glu Arg Ala Lys Ala His Gly Tyr Lys Ile Asp Met Ile Ile Val 130 135 140 Gly Asp Asp Ala Ala Val Gly Arg Ser Lys Gly Gly Met Val Gly Arg 145 150 155 160 Arg Ala Leu Ala Ala Thr Ala Leu Val His Lys Ile Val Gly Ser Ala 165 170 175 Ala Ser Glu Ile Glu Asp Leu Ser Arg Leu Lys Ile Leu Gly Asp Ser 180 185 190 Val Ala Asn Asn Thr Val Thr Ile Gly Ala Thr Leu Asp His Cys Ser 195 200 205 Val Pro Gly Arg Asp Ile Ala Asn Phe Glu Pro Ile Gly Gln Asn Asp 210 215 220 Ala Glu Ile Gly Leu Gly Ile His Asn Glu Thr Ser Val Lys Lys Val 225 230 235 240 Asn Pro Val Pro Met Ile Asp Ser Leu Val Gln Asp Leu Leu Glu Phe 245 250 255 Leu Leu Asn Glu Asn Asp Lys Asp Arg Tyr Phe Val Pro Phe Asp Leu 260 265 270 Ser Asn Asp Glu Thr Val Leu Leu Val Asn Asn Leu Gly Gly Thr Ser 275 280 285 Thr Leu Glu Met Tyr Ala Ile Thr Asn Cys Val Ile Glu Thr Leu Tyr 290 295 300 Gln Gln Tyr Ser Leu Arg Pro Lys Lys Val Ile Val Gly Glu Phe Ala 305 310 315 320 Thr Ser Leu Asn Ala Pro Gly Phe Ser Ile Thr Leu Leu Asn Val Ser 325 330 335 Cys Ala Ser Lys Gln Ser Gln Ile Ser Ile Ser His Ile Met Ser Tyr 340 345 350 Leu Asp Leu Pro Thr Asp Ala Pro Gly Trp Lys Ala His Pro Cys Gly 355 360 365 Phe Gly Leu Glu Arg Asp Ile Asn Ile Glu Thr Ser Ile Asn Gly Ile 370 375 380 Asp Ser Phe Val Lys Ser Gln Leu Lys Leu Ser Arg Glu Gln Gln Thr 385 390 395 400 Asp Phe Arg Ser Ser Leu Val Asn Gly Leu Glu Lys Leu Leu Asp Lys 405 410 415 Glu Pro Ser Ile Thr Phe Tyr Asp Thr Val Ala Gly Asp Gly Asp Cys 420 425 430 Gly Glu Thr Leu Ala Ser Gly Ala Asn Gly Ile Leu Glu Ser Leu Arg 435 440 445 Asn Asn Glu Ile Cys Phe Glu Asp Pro Val Tyr Ser Ile Ser Gln Ile 450 455 460 Ala Asn Ile Val Glu Asp Lys Met Gly Gly Thr Ser Gly Gly Leu Tyr 465 470 475 480 Ser Ile Phe Leu Thr Ser Leu Ile Lys His Leu Gln Asp Cys Thr Thr 485 490 495 Leu Asn Leu Cys Glu Met Phe Ala Ser Ser Leu His Asn Ala Leu Tyr 500 505 510 Gln Gly Leu Tyr Lys Tyr Thr Arg Ala Arg Val Gly Gly Arg Thr Leu 515 520 525 Ile Asp Ala Leu Glu Pro Phe Val Asn Thr Phe Asn Asp Thr Leu Asn 530 535 540 Phe Ser Lys Ala Ala Gln Ala Ala Ile Asp Gly Ser Glu Ser Thr Arg 545 550 555 560 Lys Leu Ala Ala Lys Phe Gly Arg Ala Ser Tyr Val Asn Glu Gln Glu 565 570 575 Phe Lys Gln Phe Asp Glu Glu Gly Gly Leu Pro Asp Pro Gly Ala Ile 580 585 590 Gly Leu Ala Thr Leu Ile Ala Gly Phe Ala Gly Val Asp Tyr Asn 595 600 605 481752DNAEscherichia blattaeCDS(1)..(1752) 48atg gtc tgc ccg cca gac ctt aac tca caa cct ttt act tcc cga cac 48Met Val Cys Pro Pro Asp Leu Asn Ser Gln Pro Phe Thr Ser Arg His 1 5 10 15 acg cgc tac agc ccg ctg tac ggg tgt gtt gta cct aac gat cag gaa 96Thr Arg Tyr Ser Pro Leu Tyr Gly Cys Val Val Pro Asn Asp Gln Glu 20 25 30 acc gtt atg tcg caa ttt ttt tat aac caa cgc gaa aat ctt gtc agt 144Thr Val Met Ser Gln Phe Phe Tyr Asn Gln Arg Glu Asn Leu Val Ser 35 40 45 gac gcc atc gaa ggg gca atg att gcc agc ccg tgg aac aac ctg gcc 192Asp Ala Ile Glu Gly Ala Met Ile Ala Ser Pro Trp Asn Asn Leu Ala 50 55 60 cgt ctg gag agc gat ccc gcc atc cgc atc gtg gtg cgc cgg gat ctg 240Arg Leu Glu Ser Asp Pro Ala Ile Arg Ile Val Val Arg Arg Asp Leu 65 70 75 80 gat aaa tcc cgg gtg gcg gtg atc tcc ggg ggc ggt gcc ggt cac gaa 288Asp Lys Ser Arg Val Ala Val Ile Ser Gly Gly Gly Ala Gly His Glu 85 90 95 ccg gcc cat gtg ggc ttt gtg ggt aaa ggc atg ctg acc gcc gcc gtg 336Pro Ala His Val Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val 100 105 110 tgt ggt gat ctg ttt gcc tca ccg agc gtg gat gcg gtg ctt acc gcc 384Cys Gly Asp Leu Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala 115 120 125 att cag gcg gtc acc ggc gag gcg ggc tgc ctg ctg att gtc aaa aac 432Ile Gln Ala Val Thr Gly Glu Ala Gly Cys Leu Leu Ile Val Lys Asn 130 135 140 tac acc ggt gac cgg ctg aac ttc ggg ctg gca gca gag aaa gcc cgg 480Tyr Thr Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg 145 150 155 160 cgc atg ggc tac aaa gtg gac atg gtg att gtg ggg gat gat atc tca 528Arg Met Gly Tyr Lys Val Asp Met Val Ile Val Gly Asp Asp Ile Ser 165 170 175 ctg ccg gag aac aaa cac ccg cgc ggc att gcc ggg acg att atg atc 576Leu Pro Glu Asn Lys His Pro Arg Gly Ile Ala Gly Thr Ile Met Ile 180 185 190 cac aaa gtg gcg ggg tac ttc gcc gaa acc ggc tgc aac ctg gac acg 624His Lys Val Ala Gly Tyr Phe Ala Glu Thr Gly Cys Asn Leu Asp Thr 195 200 205 gtc gcc cgg gaa gcc cgg ctg gca atg gag cgg gta ttc agt att ggc 672Val Ala Arg Glu Ala Arg Leu Ala Met Glu Arg Val Phe Ser Ile Gly 210 215 220 gtg gcc ctt tcc agc tgc cac tta ccg gcc gat ccg cag gat ggc gtg 720Val Ala Leu Ser Ser Cys His Leu Pro Ala Asp Pro Gln Asp Gly Val 225 230 235 240 cgc cat cac ccg ggc cag gct gag ctg ggc atg ggg atc cac ggg gag 768Arg His His Pro Gly Gln Ala Glu Leu Gly Met Gly Ile His Gly Glu 245 250 255 ccc ggc gca agc gtc atc gac acc cag aac agc acc gac att gtg cgc 816Pro Gly Ala Ser Val Ile Asp Thr Gln Asn Ser Thr Asp Ile Val Arg 260 265 270 ctg atg gtg gca aaa atc cgc gct gcc ctg cct gaa acc ggc cgc ctg 864Leu Met Val Ala Lys Ile Arg Ala Ala Leu Pro Glu Thr Gly Arg Leu 275 280 285 ctg ctg atg ctg aat aac ctt ggc ggc gtc tca gtc acc gaa atg gcg 912Leu Leu Met Leu Asn Asn Leu Gly Gly Val Ser Val Thr Glu Met Ala 290 295 300 atc ctc acc cgg gag ctg gcc cac tgt gag ctt gcc acc cgc acc gac 960Ile Leu Thr Arg Glu Leu Ala His Cys Glu Leu Ala Thr Arg Thr Asp 305 310 315 320 tgg ttg atg ggc ccg gca ccg ctg gtc agc gcc ctg gac atg aaa ggc 1008Trp Leu Met Gly Pro Ala Pro Leu Val Ser Ala Leu Asp Met Lys Gly 325 330 335 ttt tcc atc acc gcc ctg gtc atg gaa gag agc att gaa aaa gcc ctg 1056Phe Ser Ile Thr Ala Leu Val Met Glu Glu Ser Ile Glu Lys Ala Leu 340 345 350 ctg gca gac gtg gaa acc gca ggc tgg ctg ccg cca gtg cgc ctg cgc 1104Leu Ala Asp Val Glu Thr Ala Gly Trp Leu Pro Pro Val Arg Leu Arg 355 360 365 gcc agc cag acc cag ccc tgc aat atc cgc agt gcc cgg gtg gca ttc 1152Ala Ser Gln Thr Gln Pro Cys Asn Ile Arg Ser Ala Arg Val Ala Phe 370 375 380 acc ccg tca gac aac ccg gta gtg ggc cag tat gtg gag acc gtc acc 1200Thr Pro Ser Asp Asn Pro Val Val Gly Gln Tyr Val Glu Thr Val Thr 385 390 395 400 gcc aca ctc agc gcc cag gaa gcg gaa ctt aac gcc ctg gat gcc aaa 1248Ala Thr Leu Ser Ala Gln Glu Ala Glu Leu Asn Ala Leu Asp Ala Lys 405 410 415 gtg ggc gac ggc gat acc ggc tcc acc ttt gcc gcc ggg gcc cgc gcc 1296Val Gly Asp Gly Asp Thr Gly Ser Thr Phe Ala Ala Gly Ala Arg Ala 420 425 430 att gca gaa ctg ctg cac cag cac cag ctg ccg ctc agc cag ctg gat 1344Ile Ala Glu Leu Leu His Gln His Gln Leu Pro Leu Ser Gln Leu Asp 435 440 445 acc ctg tgc gcc ctg atc ggc gaa cgc tta aca gta gtg atg ggg ggc 1392Thr Leu Cys Ala Leu Ile Gly Glu Arg Leu Thr Val Val Met Gly Gly 450 455 460 tcc agc ggt gtg ctg atg tcc atc ttc ttt acg gcc gca ggc cag gca 1440Ser Ser Gly Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Ala 465 470 475 480 atc agc gaa ggg aaa ccg gtg gtg gcc gca ctc cag gcg ggc ctg gcg 1488Ile Ser Glu Gly Lys Pro Val Val Ala Ala Leu Gln Ala Gly Leu Ala 485 490 495 cag atg aag tat tac ggc ggt gcc gat ctg ggt gac cgc acc ctg att 1536Gln Met Lys Tyr Tyr Gly Gly Ala Asp Leu Gly Asp Arg Thr Leu Ile 500 505 510 gat gcc ctg caa cct gcg ctg gca gct ctg gca cag cat ccg ggg gat 1584Asp Ala Leu Gln Pro Ala Leu Ala Ala Leu Ala Gln His Pro Gly Asp 515 520 525 ctg gcg gcg gca tac cag gca gcc cgg gac ggg gca gac gcc acc acc 1632Leu Ala Ala Ala Tyr Gln Ala Ala Arg Asp Gly Ala Asp Ala Thr Thr 530 535 540 cgc gcc acc aaa gcc aat gcc ggt cgc gcc tct tac ctg aac agc gac 1680Arg Ala Thr Lys Ala Asn Ala Gly Arg Ala Ser Tyr Leu Asn Ser Asp 545 550 555 560 agc ctg gcg ggc aat atg gac ccg ggc gct cac gca gtc gca atg gtc 1728Ser Leu Ala Gly Asn Met Asp Pro Gly Ala His Ala Val Ala Met Val 565 570 575 ttt aag gcg ctg gcg ggc gcc tga 1752Phe Lys Ala Leu Ala Gly Ala 580 49583PRTEscherichia blattae 49Met Val Cys Pro Pro Asp Leu Asn Ser Gln Pro Phe Thr Ser Arg His 1 5 10 15 Thr Arg Tyr Ser Pro Leu Tyr Gly Cys Val Val Pro Asn Asp Gln Glu 20 25 30 Thr Val Met Ser Gln Phe Phe Tyr Asn Gln Arg Glu Asn Leu Val Ser 35 40 45 Asp Ala Ile Glu Gly Ala Met Ile Ala Ser Pro Trp Asn Asn Leu Ala 50 55 60 Arg Leu Glu Ser Asp Pro Ala Ile Arg Ile Val Val Arg Arg Asp Leu 65 70 75 80 Asp Lys Ser Arg Val Ala Val Ile Ser Gly Gly Gly Ala Gly His Glu 85 90 95 Pro Ala His Val Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val 100 105 110 Cys Gly Asp Leu Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala 115 120 125 Ile Gln Ala Val Thr Gly Glu Ala Gly Cys Leu Leu Ile Val Lys Asn 130 135 140 Tyr Thr Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg 145 150 155 160 Arg Met Gly Tyr Lys Val Asp Met Val Ile Val Gly Asp Asp Ile Ser 165 170 175 Leu Pro Glu Asn Lys His Pro Arg Gly Ile Ala Gly Thr Ile Met Ile 180 185 190 His Lys Val Ala Gly Tyr Phe Ala Glu Thr Gly Cys Asn Leu Asp Thr 195 200 205 Val Ala Arg Glu Ala Arg Leu Ala Met Glu Arg Val Phe Ser Ile Gly 210 215 220 Val Ala Leu Ser Ser Cys His Leu Pro Ala Asp Pro Gln Asp Gly Val 225 230 235 240 Arg His His Pro Gly Gln Ala Glu Leu Gly Met Gly Ile His Gly Glu 245 250 255 Pro Gly Ala Ser Val Ile Asp Thr Gln Asn Ser Thr Asp Ile Val Arg 260 265 270 Leu Met Val Ala Lys Ile Arg Ala Ala Leu Pro Glu Thr Gly Arg Leu 275 280 285 Leu Leu Met Leu Asn Asn Leu Gly Gly Val Ser Val Thr Glu Met Ala 290 295 300 Ile Leu Thr Arg Glu Leu Ala His Cys Glu Leu Ala Thr Arg Thr Asp 305 310 315 320 Trp Leu Met Gly Pro Ala Pro Leu Val Ser Ala Leu Asp Met Lys Gly 325 330 335 Phe Ser Ile Thr Ala Leu Val Met Glu Glu Ser Ile Glu Lys Ala Leu 340 345 350 Leu Ala Asp Val Glu Thr Ala Gly Trp Leu Pro Pro Val Arg Leu Arg 355 360 365 Ala Ser Gln Thr Gln Pro Cys Asn Ile Arg Ser Ala Arg Val Ala Phe 370 375 380 Thr Pro Ser Asp Asn Pro Val Val Gly Gln Tyr Val Glu Thr Val Thr 385 390 395 400 Ala Thr Leu Ser Ala Gln Glu Ala Glu Leu Asn Ala Leu Asp Ala Lys 405 410 415 Val Gly Asp Gly Asp Thr Gly Ser Thr Phe Ala Ala Gly Ala Arg Ala 420 425 430 Ile Ala Glu Leu Leu His Gln His Gln Leu Pro Leu Ser Gln Leu Asp 435 440 445 Thr Leu Cys Ala Leu Ile Gly Glu Arg Leu Thr Val Val Met Gly Gly 450 455 460 Ser Ser Gly Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Ala 465 470 475 480 Ile Ser Glu Gly Lys Pro Val Val Ala Ala Leu Gln Ala Gly Leu Ala 485 490 495 Gln Met Lys Tyr Tyr Gly Gly Ala Asp Leu Gly Asp Arg Thr Leu Ile 500 505 510 Asp Ala Leu Gln Pro Ala Leu Ala Ala Leu Ala Gln His Pro Gly Asp 515 520 525 Leu Ala Ala Ala Tyr Gln Ala Ala Arg Asp Gly Ala Asp Ala Thr Thr 530 535 540 Arg Ala Thr Lys Ala Asn Ala Gly Arg Ala Ser Tyr Leu Asn Ser Asp 545 550 555 560 Ser Leu Ala Gly Asn Met Asp Pro Gly Ala His Ala Val Ala Met Val 565 570 575 Phe Lys Ala Leu Ala Gly Ala 580 501647DNAEnterobacter sp.638CDS(1)..(1647) 50atg tcc aga ttc ttt ttt aat gac cgc aaa cag ctg gtc aac gac gcc 48Met Ser Arg Phe Phe Phe Asn Asp Arg Lys Gln Leu Val Asn Asp Ala 1 5 10 15 att gaa ggc ata ctg att tcc gcg ccg cac ggg aat ctt gtc aaa ctt 96Ile Glu Gly Ile Leu Ile Ser Ala Pro His Gly Asn Leu Val Lys Leu 20 25 30 gat atc gat ccg gcc att cgg gtg gtt gcg cgt agc gac tgg gat aaa 144Asp Ile Asp Pro Ala Ile Arg Val Val Ala Arg Ser Asp Trp Asp Lys 35 40 45 agc cgc gta gcg gtg att tcc ggt ggt ggg tcg ggg cac gaa ccc gct 192Ser Arg Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala 50 55 60 cat gcc gga ttt gtc ggc aaa ggg atg ttg acc gca gcc gtc tgt ggc 240His Ala Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val Cys Gly 65 70

75 80 gat ctg ttt gcc tca ccg agc gta gat gcg gtg tta aac gcg att gtg 288Asp Leu Phe Ala Ser Pro Ser Val Asp Ala Val Leu Asn Ala Ile Val 85 90 95 gcg gta acg ggc gat cgc ggt tgc ctg tta atc gtc aaa aat tat acc 336Ala Val Thr Gly Asp Arg Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr 100 105 110 ggc gat cgg ctt aac ttt ggc ctc gcg gcg gaa aag gcc aaa cgc tat 384Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Lys Arg Tyr 115 120 125 ggg ctg aag gtt gag atg gtg att gtt gct gat gac atc gcc ctg ccg 432Gly Leu Lys Val Glu Met Val Ile Val Ala Asp Asp Ile Ala Leu Pro 130 135 140 gat aac aaa cag ccg cgt ggc att gcg ggt acg gcg ctg gta cac aaa 480Asp Asn Lys Gln Pro Arg Gly Ile Ala Gly Thr Ala Leu Val His Lys 145 150 155 160 att gcc gga tat gca gcc gaa cag ggg aaa tca ctg gct gac gtg cgg 528Ile Ala Gly Tyr Ala Ala Glu Gln Gly Lys Ser Leu Ala Asp Val Arg 165 170 175 gat att gcg cag cag gcc tgt gac aat atc tgg agc ctg ggc gtg gcg 576Asp Ile Ala Gln Gln Ala Cys Asp Asn Ile Trp Ser Leu Gly Val Ala 180 185 190 atg caa acg tgc aac ctg ccg ggc agc gac gat gaa gaa ggg cgt atc 624Met Gln Thr Cys Asn Leu Pro Gly Ser Asp Asp Glu Glu Gly Arg Ile 195 200 205 aag gat gga cat gtc gaa ctg ggg ctg ggc att cac ggc gag ccg ggc 672Lys Asp Gly His Val Glu Leu Gly Leu Gly Ile His Gly Glu Pro Gly 210 215 220 gcg tcg gtg gtt gat acg cac aac agc aaa gag att atc gac acc ctg 720Ala Ser Val Val Asp Thr His Asn Ser Lys Glu Ile Ile Asp Thr Leu 225 230 235 240 gtg aag ccg tta aaa gag acg gcc ggc gaa ggc aaa ttt gcg gtg ctg 768Val Lys Pro Leu Lys Glu Thr Ala Gly Glu Gly Lys Phe Ala Val Leu 245 250 255 att aac aat ctc ggc ggt gta tcg gcg ctg gag atg gcg ctg ctc acg 816Ile Asn Asn Leu Gly Gly Val Ser Ala Leu Glu Met Ala Leu Leu Thr 260 265 270 aaa gaa ctg gcg gat tct gcg ctg aaa gaa aat att gcg tat ctg att 864Lys Glu Leu Ala Asp Ser Ala Leu Lys Glu Asn Ile Ala Tyr Leu Ile 275 280 285 ggc cct gcg ccg ctg gta agc tcg ctg gat atg aaa ggc ttt tcg ctg 912Gly Pro Ala Pro Leu Val Ser Ser Leu Asp Met Lys Gly Phe Ser Leu 290 295 300 tca ctg tta cag ctt aac gat acc ttt gag aaa gcc att aac gca ccc 960Ser Leu Leu Gln Leu Asn Asp Thr Phe Glu Lys Ala Ile Asn Ala Pro 305 310 315 320 gtc gaa act atc ggc tgg caa aag ccg gta gca ttc gcg cca tta cgc 1008Val Glu Thr Ile Gly Trp Gln Lys Pro Val Ala Phe Ala Pro Leu Arg 325 330 335 acg ctt tcg cat act gcg att cag gat cgt gtt gaa ttt acg cct tcc 1056Thr Leu Ser His Thr Ala Ile Gln Asp Arg Val Glu Phe Thr Pro Ser 340 345 350 ggg aac gac gag gtc gca gcg cga gtg gca gcg gcg acg caa acg ttg 1104Gly Asn Asp Glu Val Ala Ala Arg Val Ala Ala Ala Thr Gln Thr Leu 355 360 365 ctc gct ctg gag aac cgt tta aat gcg ctg gac gcc aaa gtg ggc gac 1152Leu Ala Leu Glu Asn Arg Leu Asn Ala Leu Asp Ala Lys Val Gly Asp 370 375 380 ggc gat acc ggg tcg act ttt gcg caa ggc gcg cgg gaa att gcg cag 1200Gly Asp Thr Gly Ser Thr Phe Ala Gln Gly Ala Arg Glu Ile Ala Gln 385 390 395 400 ctt ctg gag caa aaa cag ctt ccg cta aac gat ctt tct aag ctg ctg 1248Leu Leu Glu Gln Lys Gln Leu Pro Leu Asn Asp Leu Ser Lys Leu Leu 405 410 415 ttg ttg atc ggc gaa cgg ctg gcg acg gtc atg ggc ggg tcg agt ggc 1296Leu Leu Ile Gly Glu Arg Leu Ala Thr Val Met Gly Gly Ser Ser Gly 420 425 430 gtc ctg atg tcg atc ttc ttc aca gct gcc gga cag aaa atg cat gac 1344Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Lys Met His Asp 435 440 445 gga aaa tca ctg ccg gag gca ttg ctg agt ggg ctt gcg caa atg aag 1392Gly Lys Ser Leu Pro Glu Ala Leu Leu Ser Gly Leu Ala Gln Met Lys 450 455 460 cat tac ggc gga gcg gat ctt ggc gat cgt acc ttg atc gac gcg cta 1440His Tyr Gly Gly Ala Asp Leu Gly Asp Arg Thr Leu Ile Asp Ala Leu 465 470 475 480 cag cct gca ctg gag acg ctg cat aac ggc gat att cag gcg gct gcc 1488Gln Pro Ala Leu Glu Thr Leu His Asn Gly Asp Ile Gln Ala Ala Ala 485 490 495 cag gca gcg aaa aaa ggc gca gac gct acg gct ggc atg caa aaa gcg 1536Gln Ala Ala Lys Lys Gly Ala Asp Ala Thr Ala Gly Met Gln Lys Ala 500 505 510 gga gca ggg cgt tcg tcg tat gtg aat aaa gag aac ctg gaa ggt gta 1584Gly Ala Gly Arg Ser Ser Tyr Val Asn Lys Glu Asn Leu Glu Gly Val 515 520 525 ata gat cct ggg gca gtg gcc gtt gca gag gtg ttt gcg gca gtg gcc 1632Ile Asp Pro Gly Ala Val Ala Val Ala Glu Val Phe Ala Ala Val Ala 530 535 540 aaa gca aaa cag tag 1647Lys Ala Lys Gln 545 51548PRTEnterobacter sp.638 51Met Ser Arg Phe Phe Phe Asn Asp Arg Lys Gln Leu Val Asn Asp Ala 1 5 10 15 Ile Glu Gly Ile Leu Ile Ser Ala Pro His Gly Asn Leu Val Lys Leu 20 25 30 Asp Ile Asp Pro Ala Ile Arg Val Val Ala Arg Ser Asp Trp Asp Lys 35 40 45 Ser Arg Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala 50 55 60 His Ala Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val Cys Gly 65 70 75 80 Asp Leu Phe Ala Ser Pro Ser Val Asp Ala Val Leu Asn Ala Ile Val 85 90 95 Ala Val Thr Gly Asp Arg Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr 100 105 110 Gly Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Lys Arg Tyr 115 120 125 Gly Leu Lys Val Glu Met Val Ile Val Ala Asp Asp Ile Ala Leu Pro 130 135 140 Asp Asn Lys Gln Pro Arg Gly Ile Ala Gly Thr Ala Leu Val His Lys 145 150 155 160 Ile Ala Gly Tyr Ala Ala Glu Gln Gly Lys Ser Leu Ala Asp Val Arg 165 170 175 Asp Ile Ala Gln Gln Ala Cys Asp Asn Ile Trp Ser Leu Gly Val Ala 180 185 190 Met Gln Thr Cys Asn Leu Pro Gly Ser Asp Asp Glu Glu Gly Arg Ile 195 200 205 Lys Asp Gly His Val Glu Leu Gly Leu Gly Ile His Gly Glu Pro Gly 210 215 220 Ala Ser Val Val Asp Thr His Asn Ser Lys Glu Ile Ile Asp Thr Leu 225 230 235 240 Val Lys Pro Leu Lys Glu Thr Ala Gly Glu Gly Lys Phe Ala Val Leu 245 250 255 Ile Asn Asn Leu Gly Gly Val Ser Ala Leu Glu Met Ala Leu Leu Thr 260 265 270 Lys Glu Leu Ala Asp Ser Ala Leu Lys Glu Asn Ile Ala Tyr Leu Ile 275 280 285 Gly Pro Ala Pro Leu Val Ser Ser Leu Asp Met Lys Gly Phe Ser Leu 290 295 300 Ser Leu Leu Gln Leu Asn Asp Thr Phe Glu Lys Ala Ile Asn Ala Pro 305 310 315 320 Val Glu Thr Ile Gly Trp Gln Lys Pro Val Ala Phe Ala Pro Leu Arg 325 330 335 Thr Leu Ser His Thr Ala Ile Gln Asp Arg Val Glu Phe Thr Pro Ser 340 345 350 Gly Asn Asp Glu Val Ala Ala Arg Val Ala Ala Ala Thr Gln Thr Leu 355 360 365 Leu Ala Leu Glu Asn Arg Leu Asn Ala Leu Asp Ala Lys Val Gly Asp 370 375 380 Gly Asp Thr Gly Ser Thr Phe Ala Gln Gly Ala Arg Glu Ile Ala Gln 385 390 395 400 Leu Leu Glu Gln Lys Gln Leu Pro Leu Asn Asp Leu Ser Lys Leu Leu 405 410 415 Leu Leu Ile Gly Glu Arg Leu Ala Thr Val Met Gly Gly Ser Ser Gly 420 425 430 Val Leu Met Ser Ile Phe Phe Thr Ala Ala Gly Gln Lys Met His Asp 435 440 445 Gly Lys Ser Leu Pro Glu Ala Leu Leu Ser Gly Leu Ala Gln Met Lys 450 455 460 His Tyr Gly Gly Ala Asp Leu Gly Asp Arg Thr Leu Ile Asp Ala Leu 465 470 475 480 Gln Pro Ala Leu Glu Thr Leu His Asn Gly Asp Ile Gln Ala Ala Ala 485 490 495 Gln Ala Ala Lys Lys Gly Ala Asp Ala Thr Ala Gly Met Gln Lys Ala 500 505 510 Gly Ala Gly Arg Ser Ser Tyr Val Asn Lys Glu Asn Leu Glu Gly Val 515 520 525 Ile Asp Pro Gly Ala Val Ala Val Ala Glu Val Phe Ala Ala Val Ala 530 535 540 Lys Ala Lys Gln 545 521695DNAPsychromonas sp. CNPT3CDS(1)..(1695) 52atg gtt ata tta ttt ttt aac cta ctt tat ttt aaa cta ctt ttt gga 48Met Val Ile Leu Phe Phe Asn Leu Leu Tyr Phe Lys Leu Leu Phe Gly 1 5 10 15 gta att atg agc cgt tta ttt att aat gat aaa gca acg tta gtc cat 96Val Ile Met Ser Arg Leu Phe Ile Asn Asp Lys Ala Thr Leu Val His 20 25 30 gat gcg att gat ggc atc tta tat agc aat aag cat aat aac ctt gtt 144Asp Ala Ile Asp Gly Ile Leu Tyr Ser Asn Lys His Asn Asn Leu Val 35 40 45 cgt ttg gat gtt gat ccg caa att aga att gtg acg cgt aat gat tgg 192Arg Leu Asp Val Asp Pro Gln Ile Arg Ile Val Thr Arg Asn Asp Trp 50 55 60 cat cac gat aaa gtt gcc att atc tct ggt ggt ggc tct ggg cat gag 240His His Asp Lys Val Ala Ile Ile Ser Gly Gly Gly Ser Gly His Glu 65 70 75 80 cct gct cat gtt ggt ttt att ggt aaa ggt atg tta acg gct gct gtt 288Pro Ala His Val Gly Phe Ile Gly Lys Gly Met Leu Thr Ala Ala Val 85 90 95 tgt ggc gat gtt ttt gcc tca cca agt gtg gat gcg gtg tta aat gcc 336Cys Gly Asp Val Phe Ala Ser Pro Ser Val Asp Ala Val Leu Asn Ala 100 105 110 ata gtc cat gtc aca gga gag aaa ggt tgt ttg gtc att gtt aaa aac 384Ile Val His Val Thr Gly Glu Lys Gly Cys Leu Val Ile Val Lys Asn 115 120 125 tat acc ggc gac cgt ttg aac ttt ggc ctt gct tgt gaa aaa gcc aaa 432Tyr Thr Gly Asp Arg Leu Asn Phe Gly Leu Ala Cys Glu Lys Ala Lys 130 135 140 aaa atg ggt tta aac gtt gaa atg gta ata gta gac gat gat atc tct 480Lys Met Gly Leu Asn Val Glu Met Val Ile Val Asp Asp Asp Ile Ser 145 150 155 160 att cct gac aat ctt aaa cct cgt ggt att gct ggc aca ttg ttt gtc 528Ile Pro Asp Asn Leu Lys Pro Arg Gly Ile Ala Gly Thr Leu Phe Val 165 170 175 cat aaa gtg gca ggt aat gca gca gag caa ggc gct tct tta aat gtc 576His Lys Val Ala Gly Asn Ala Ala Glu Gln Gly Ala Ser Leu Asn Val 180 185 190 gtt aaa aag gca gcc caa ggt gcg att gat gca acg gca agt att ggc 624Val Lys Lys Ala Ala Gln Gly Ala Ile Asp Ala Thr Ala Ser Ile Gly 195 200 205 ctc gca ctg aca agt tgc tct tta ccg gga gaa gaa tca acg cag cgt 672Leu Ala Leu Thr Ser Cys Ser Leu Pro Gly Glu Glu Ser Thr Gln Arg 210 215 220 att gca gaa ggc aag gct gaa tta ggg tta ggt att cat gga gag cct 720Ile Ala Glu Gly Lys Ala Glu Leu Gly Leu Gly Ile His Gly Glu Pro 225 230 235 240 ggc att aaa aca att gat gta aca tgt tgt cgt gat ctt gtg atg atc 768Gly Ile Lys Thr Ile Asp Val Thr Cys Cys Arg Asp Leu Val Met Ile 245 250 255 atg gtt gat aaa cta aaa caa tcg ttt tct gct cca gat att aaa att 816Met Val Asp Lys Leu Lys Gln Ser Phe Ser Ala Pro Asp Ile Lys Ile 260 265 270 gca gtg atg atc aac aat tta ggt ggc gtt tct cca tta gag atg agc 864Ala Val Met Ile Asn Asn Leu Gly Gly Val Ser Pro Leu Glu Met Ser 275 280 285 ctt ata tgt aaa gac atc gtg gaa tct gag tta aaa aat aat att gag 912Leu Ile Cys Lys Asp Ile Val Glu Ser Glu Leu Lys Asn Asn Ile Glu 290 295 300 tta gtg gtt ggg cct gct cca ttt atg acg gct att gat atg aaa gga 960Leu Val Val Gly Pro Ala Pro Phe Met Thr Ala Ile Asp Met Lys Gly 305 310 315 320 ttt tca att tca gtg att gaa tta aca ggc gat cat gct caa gct ctg 1008Phe Ser Ile Ser Val Ile Glu Leu Thr Gly Asp His Ala Gln Ala Leu 325 330 335 tgc gcc cct gtt gaa gtg gat gca tgg gtt gaa gcc att cca ttg cgc 1056Cys Ala Pro Val Glu Val Asp Ala Trp Val Glu Ala Ile Pro Leu Arg 340 345 350 cca tta aat gtg ata aaa aaa gat aaa gtg tcc att aac ttt gca ttt 1104Pro Leu Asn Val Ile Lys Lys Asp Lys Val Ser Ile Asn Phe Ala Phe 355 360 365 gaa gcg tct gaa aat gca cag gtt gca agt att gtt aaa aca gta acc 1152Glu Ala Ser Glu Asn Ala Gln Val Ala Ser Ile Val Lys Thr Val Thr 370 375 380 ttg gct ttg att aat gca gaa aaa gag tta aat cgt ctg gat acg tta 1200Leu Ala Leu Ile Asn Ala Glu Lys Glu Leu Asn Arg Leu Asp Thr Leu 385 390 395 400 gtg ggc gat ggg gat acc ggt tca acg ttc tct gcg ggt gct cga caa 1248Val Gly Asp Gly Asp Thr Gly Ser Thr Phe Ser Ala Gly Ala Arg Gln 405 410 415 gtt tta gct gag ctc aat gcg ggt aat tta cca ctt aat gat act ggc 1296Val Leu Ala Glu Leu Asn Ala Gly Asn Leu Pro Leu Asn Asp Thr Gly 420 425 430 gcg ttg ctt aat gtc att ggg gaa caa ctt gct acc gtt atg ggg gga 1344Ala Leu Leu Asn Val Ile Gly Glu Gln Leu Ala Thr Val Met Gly Gly 435 440 445 tcg tca ggc gta tta ttc tct atc ttc ttc aca gca gcg ggt cat cat 1392Ser Ser Gly Val Leu Phe Ser Ile Phe Phe Thr Ala Ala Gly His His 450 455 460 tac cag caa cat ggt gat aca gta caa gca tta caa gcc ggt tta caa 1440Tyr Gln Gln His Gly Asp Thr Val Gln Ala Leu Gln Ala Gly Leu Gln 465 470 475 480 caa atg atg caa tac ggt gga gca aaa ccg ggt gat cgt acg atg att 1488Gln Met Met Gln Tyr Gly Gly Ala Lys Pro Gly Asp Arg Thr Met Ile 485 490 495 gat gca atg tac cca gcc ttt atc gct tgg aaa aat gaa ggt ttt gaa 1536Asp Ala Met Tyr Pro Ala Phe Ile Ala Trp Lys Asn Glu Gly Phe Glu 500 505 510 gct gcc att gtt gcg gct aaa ata ggg gca gaa agc aca gcc act atg 1584Ala Ala Ile Val Ala Ala Lys Ile Gly Ala Glu Ser Thr Ala Thr Met 515 520 525 gtc gaa gcc aaa gca gga cgc tct tct tat tta aac agt gag agt tta 1632Val Glu Ala Lys Ala Gly Arg Ser Ser Tyr Leu Asn Ser Glu Ser Leu

530 535 540 aaa ggt gtt aaa gat ccg ggc tca gtc gct gtt gag ttg gtt ttt gac 1680Lys Gly Val Lys Asp Pro Gly Ser Val Ala Val Glu Leu Val Phe Asp 545 550 555 560 gcg ttt aat gtg taa 1695Ala Phe Asn Val 53564PRTPsychromonas sp. CNPT3 53Met Val Ile Leu Phe Phe Asn Leu Leu Tyr Phe Lys Leu Leu Phe Gly 1 5 10 15 Val Ile Met Ser Arg Leu Phe Ile Asn Asp Lys Ala Thr Leu Val His 20 25 30 Asp Ala Ile Asp Gly Ile Leu Tyr Ser Asn Lys His Asn Asn Leu Val 35 40 45 Arg Leu Asp Val Asp Pro Gln Ile Arg Ile Val Thr Arg Asn Asp Trp 50 55 60 His His Asp Lys Val Ala Ile Ile Ser Gly Gly Gly Ser Gly His Glu 65 70 75 80 Pro Ala His Val Gly Phe Ile Gly Lys Gly Met Leu Thr Ala Ala Val 85 90 95 Cys Gly Asp Val Phe Ala Ser Pro Ser Val Asp Ala Val Leu Asn Ala 100 105 110 Ile Val His Val Thr Gly Glu Lys Gly Cys Leu Val Ile Val Lys Asn 115 120 125 Tyr Thr Gly Asp Arg Leu Asn Phe Gly Leu Ala Cys Glu Lys Ala Lys 130 135 140 Lys Met Gly Leu Asn Val Glu Met Val Ile Val Asp Asp Asp Ile Ser 145 150 155 160 Ile Pro Asp Asn Leu Lys Pro Arg Gly Ile Ala Gly Thr Leu Phe Val 165 170 175 His Lys Val Ala Gly Asn Ala Ala Glu Gln Gly Ala Ser Leu Asn Val 180 185 190 Val Lys Lys Ala Ala Gln Gly Ala Ile Asp Ala Thr Ala Ser Ile Gly 195 200 205 Leu Ala Leu Thr Ser Cys Ser Leu Pro Gly Glu Glu Ser Thr Gln Arg 210 215 220 Ile Ala Glu Gly Lys Ala Glu Leu Gly Leu Gly Ile His Gly Glu Pro 225 230 235 240 Gly Ile Lys Thr Ile Asp Val Thr Cys Cys Arg Asp Leu Val Met Ile 245 250 255 Met Val Asp Lys Leu Lys Gln Ser Phe Ser Ala Pro Asp Ile Lys Ile 260 265 270 Ala Val Met Ile Asn Asn Leu Gly Gly Val Ser Pro Leu Glu Met Ser 275 280 285 Leu Ile Cys Lys Asp Ile Val Glu Ser Glu Leu Lys Asn Asn Ile Glu 290 295 300 Leu Val Val Gly Pro Ala Pro Phe Met Thr Ala Ile Asp Met Lys Gly 305 310 315 320 Phe Ser Ile Ser Val Ile Glu Leu Thr Gly Asp His Ala Gln Ala Leu 325 330 335 Cys Ala Pro Val Glu Val Asp Ala Trp Val Glu Ala Ile Pro Leu Arg 340 345 350 Pro Leu Asn Val Ile Lys Lys Asp Lys Val Ser Ile Asn Phe Ala Phe 355 360 365 Glu Ala Ser Glu Asn Ala Gln Val Ala Ser Ile Val Lys Thr Val Thr 370 375 380 Leu Ala Leu Ile Asn Ala Glu Lys Glu Leu Asn Arg Leu Asp Thr Leu 385 390 395 400 Val Gly Asp Gly Asp Thr Gly Ser Thr Phe Ser Ala Gly Ala Arg Gln 405 410 415 Val Leu Ala Glu Leu Asn Ala Gly Asn Leu Pro Leu Asn Asp Thr Gly 420 425 430 Ala Leu Leu Asn Val Ile Gly Glu Gln Leu Ala Thr Val Met Gly Gly 435 440 445 Ser Ser Gly Val Leu Phe Ser Ile Phe Phe Thr Ala Ala Gly His His 450 455 460 Tyr Gln Gln His Gly Asp Thr Val Gln Ala Leu Gln Ala Gly Leu Gln 465 470 475 480 Gln Met Met Gln Tyr Gly Gly Ala Lys Pro Gly Asp Arg Thr Met Ile 485 490 495 Asp Ala Met Tyr Pro Ala Phe Ile Ala Trp Lys Asn Glu Gly Phe Glu 500 505 510 Ala Ala Ile Val Ala Ala Lys Ile Gly Ala Glu Ser Thr Ala Thr Met 515 520 525 Val Glu Ala Lys Ala Gly Arg Ser Ser Tyr Leu Asn Ser Glu Ser Leu 530 535 540 Lys Gly Val Lys Asp Pro Gly Ser Val Ala Val Glu Leu Val Phe Asp 545 550 555 560 Ala Phe Asn Val 541647DNAStapia aggregata IAM12614CDS1(1)..(1647)CDS(1)..(1647) 54atg aag caa ttc atc aat acc aag gaa acg ctc gtc acc gaa gcg att 48Met Lys Gln Phe Ile Asn Thr Lys Glu Thr Leu Val Thr Glu Ala Ile 1 5 10 15 gac ggc atg ttg cgc acg gcc ggc ggg cgg ctt gcc cgg ctt gac ggc 96Asp Gly Met Leu Arg Thr Ala Gly Gly Arg Leu Ala Arg Leu Asp Gly 20 25 30 tat ccg cat atc aag gtg gtc gtg cgc acc gac tgg gac aaa tcg aag 144Tyr Pro His Ile Lys Val Val Val Arg Thr Asp Trp Asp Lys Ser Lys 35 40 45 gtg gct ctg gtg tcc ggc ggc ggt tcc ggc cac gag ccg agc cat gcc 192Val Ala Leu Val Ser Gly Gly Gly Ser Gly His Glu Pro Ser His Ala 50 55 60 ggt ttc gtc ggc cag ggc atg ctg acg gcg gcc gtc tgc ggc gaa gtg 240Gly Phe Val Gly Gln Gly Met Leu Thr Ala Ala Val Cys Gly Glu Val 65 70 75 80 ttt gcc tcg cct tcc gtg gat gcg gtg ctg gcg ggc att ctg gcc gtc 288Phe Ala Ser Pro Ser Val Asp Ala Val Leu Ala Gly Ile Leu Ala Val 85 90 95 acc ggc aag gct ggc tgc ctg ctg atc gtc aag aac tac acc ggc gac 336Thr Gly Lys Ala Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp 100 105 110 cgg ctg aac ttc ggt ctg gcc gcc gag cgg gcc cgc tcc ttc gga ctg 384Arg Leu Asn Phe Gly Leu Ala Ala Glu Arg Ala Arg Ser Phe Gly Leu 115 120 125 aag gtc aac atg gtg atc gtc gac gac gac gtt gcc ctg ccg gac ctg 432Lys Val Asn Met Val Ile Val Asp Asp Asp Val Ala Leu Pro Asp Leu 130 135 140 ccg cag gcg cgc ggt gtc gcc ggc acg ctg ttc gtg cac aag atc gcc 480Pro Gln Ala Arg Gly Val Ala Gly Thr Leu Phe Val His Lys Ile Ala 145 150 155 160 gga gcg ctt gcc gat cag ggt gcg gat ctg gaa acc atc acg gag gcc 528Gly Ala Leu Ala Asp Gln Gly Ala Asp Leu Glu Thr Ile Thr Glu Ala 165 170 175 gcc agg aaa acc atc ggc ggt gcg att tcc atc ggc atg tcg ctg gac 576Ala Arg Lys Thr Ile Gly Gly Ala Ile Ser Ile Gly Met Ser Leu Asp 180 185 190 acc tgc acg gtg ccg gga tcg ccc aag gaa gac cgc att gca cac ggc 624Thr Cys Thr Val Pro Gly Ser Pro Lys Glu Asp Arg Ile Ala His Gly 195 200 205 aag gcg gaa ctc gga ctt ggc att cac ggc gag gcg ggg atc gag cag 672Lys Ala Glu Leu Gly Leu Gly Ile His Gly Glu Ala Gly Ile Glu Gln 210 215 220 gtc gac tat tcc aac gcc cgc gcg gcc atg gcc atg gtg gtg gac cgg 720Val Asp Tyr Ser Asn Ala Arg Ala Ala Met Ala Met Val Val Asp Arg 225 230 235 240 ctg gcg ccg aac ctc tcg ccc gga ccg cat gtg gcg atc ctc aac aat 768Leu Ala Pro Asn Leu Ser Pro Gly Pro His Val Ala Ile Leu Asn Asn 245 250 255 ctg ggc agc acg acg ccg ctg gaa atg tcg gtg ctt ctg gaa gaa ctc 816Leu Gly Ser Thr Thr Pro Leu Glu Met Ser Val Leu Leu Glu Glu Leu 260 265 270 acg gct tcg cgc atc ggc agc cag atc cgc tgg gtc atc ggc ccg gcg 864Thr Ala Ser Arg Ile Gly Ser Gln Ile Arg Trp Val Ile Gly Pro Ala 275 280 285 gcg atg atg acc tcg ctc gac atg cat ggg ttc tcc gtg tcg ctg ctg 912Ala Met Met Thr Ser Leu Asp Met His Gly Phe Ser Val Ser Leu Leu 290 295 300 ccg gtc ggc aag acc gaa gaa gcc ttg ctg cag gcc ccg gtc gcg ccc 960Pro Val Gly Lys Thr Glu Glu Ala Leu Leu Gln Ala Pro Val Ala Pro 305 310 315 320 tgg gca tgg ccc ggc tgc ctt gcg ctt ggc gca gtg tcc gtg ctg ccg 1008Trp Ala Trp Pro Gly Cys Leu Ala Leu Gly Ala Val Ser Val Leu Pro 325 330 335 cta ccg gac ggc ctg acg ccg atc cag ccg ctg ccg tcc aag aac ccg 1056Leu Pro Asp Gly Leu Thr Pro Ile Gln Pro Leu Pro Ser Lys Asn Pro 340 345 350 gag acg cgg aag ttc atc gag cgc tgc tgc gat atc ctg atc gcc gcc 1104Glu Thr Arg Lys Phe Ile Glu Arg Cys Cys Asp Ile Leu Ile Ala Ala 355 360 365 gag gac gac ctc aat gcg ctc gac gcc aag tcg ggc gac ggc gac acc 1152Glu Asp Asp Leu Asn Ala Leu Asp Ala Lys Ser Gly Asp Gly Asp Thr 370 375 380 ggc agc acg ctt gcc acc gcc gcc cgg gcg ctg gtg aag gcg ctc gac 1200Gly Ser Thr Leu Ala Thr Ala Ala Arg Ala Leu Val Lys Ala Leu Asp 385 390 395 400 cgg ctg ccg ctg gcg gat ctc acc cag ctc tac cgg gcc atc ggg ctg 1248Arg Leu Pro Leu Ala Asp Leu Thr Gln Leu Tyr Arg Ala Ile Gly Leu 405 410 415 gaa ctc agc cag acc atg ggc ggg tct tcc ggg gtg ctg ctg gcg atc 1296Glu Leu Ser Gln Thr Met Gly Gly Ser Ser Gly Val Leu Leu Ala Ile 420 425 430 ttc ttt gcc gct gcg ggc gat gcg tcg tcc agc ggg cgc ggg gcc atc 1344Phe Phe Ala Ala Ala Gly Asp Ala Ser Ser Ser Gly Arg Gly Ala Ile 435 440 445 gga gcc ctg aag gcc ggt ctt gac cgg atc atg cag gtg ggc ggc gcc 1392Gly Ala Leu Lys Ala Gly Leu Asp Arg Ile Met Gln Val Gly Gly Ala 450 455 460 cag ccg ggc gac cgc acc atg atc gac gcg ctg ctg ccg gca ctg aat 1440Gln Pro Gly Asp Arg Thr Met Ile Asp Ala Leu Leu Pro Ala Leu Asn 465 470 475 480 gcg ctg gaa aac ggt atc gag gct gcg gcg agc gag gcc cgt cag ggg 1488Ala Leu Glu Asn Gly Ile Glu Ala Ala Ala Ser Glu Ala Arg Gln Gly 485 490 495 gcg gat gcg acg tcg cgg atc acg cgg gca cgc gcg ggc agg gcg tct 1536Ala Asp Ala Thr Ser Arg Ile Thr Arg Ala Arg Ala Gly Arg Ala Ser 500 505 510 tat gtc tcc gag gcc agc ctc tcc gga cac aac gat ccg ggc gcg gaa 1584Tyr Val Ser Glu Ala Ser Leu Ser Gly His Asn Asp Pro Gly Ala Glu 515 520 525 gcc gtt gcg cgg ctg ttc gag caa ttg acc ctt tct ccg gcc ctt acc 1632Ala Val Ala Arg Leu Phe Glu Gln Leu Thr Leu Ser Pro Ala Leu Thr 530 535 540 tcc aag tcc gca tag 1647Ser Lys Ser Ala 545 55548PRTStapia aggregata IAM12614 55Met Lys Gln Phe Ile Asn Thr Lys Glu Thr Leu Val Thr Glu Ala Ile 1 5 10 15 Asp Gly Met Leu Arg Thr Ala Gly Gly Arg Leu Ala Arg Leu Asp Gly 20 25 30 Tyr Pro His Ile Lys Val Val Val Arg Thr Asp Trp Asp Lys Ser Lys 35 40 45 Val Ala Leu Val Ser Gly Gly Gly Ser Gly His Glu Pro Ser His Ala 50 55 60 Gly Phe Val Gly Gln Gly Met Leu Thr Ala Ala Val Cys Gly Glu Val 65 70 75 80 Phe Ala Ser Pro Ser Val Asp Ala Val Leu Ala Gly Ile Leu Ala Val 85 90 95 Thr Gly Lys Ala Gly Cys Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp 100 105 110 Arg Leu Asn Phe Gly Leu Ala Ala Glu Arg Ala Arg Ser Phe Gly Leu 115 120 125 Lys Val Asn Met Val Ile Val Asp Asp Asp Val Ala Leu Pro Asp Leu 130 135 140 Pro Gln Ala Arg Gly Val Ala Gly Thr Leu Phe Val His Lys Ile Ala 145 150 155 160 Gly Ala Leu Ala Asp Gln Gly Ala Asp Leu Glu Thr Ile Thr Glu Ala 165 170 175 Ala Arg Lys Thr Ile Gly Gly Ala Ile Ser Ile Gly Met Ser Leu Asp 180 185 190 Thr Cys Thr Val Pro Gly Ser Pro Lys Glu Asp Arg Ile Ala His Gly 195 200 205 Lys Ala Glu Leu Gly Leu Gly Ile His Gly Glu Ala Gly Ile Glu Gln 210 215 220 Val Asp Tyr Ser Asn Ala Arg Ala Ala Met Ala Met Val Val Asp Arg 225 230 235 240 Leu Ala Pro Asn Leu Ser Pro Gly Pro His Val Ala Ile Leu Asn Asn 245 250 255 Leu Gly Ser Thr Thr Pro Leu Glu Met Ser Val Leu Leu Glu Glu Leu 260 265 270 Thr Ala Ser Arg Ile Gly Ser Gln Ile Arg Trp Val Ile Gly Pro Ala 275 280 285 Ala Met Met Thr Ser Leu Asp Met His Gly Phe Ser Val Ser Leu Leu 290 295 300 Pro Val Gly Lys Thr Glu Glu Ala Leu Leu Gln Ala Pro Val Ala Pro 305 310 315 320 Trp Ala Trp Pro Gly Cys Leu Ala Leu Gly Ala Val Ser Val Leu Pro 325 330 335 Leu Pro Asp Gly Leu Thr Pro Ile Gln Pro Leu Pro Ser Lys Asn Pro 340 345 350 Glu Thr Arg Lys Phe Ile Glu Arg Cys Cys Asp Ile Leu Ile Ala Ala 355 360 365 Glu Asp Asp Leu Asn Ala Leu Asp Ala Lys Ser Gly Asp Gly Asp Thr 370 375 380 Gly Ser Thr Leu Ala Thr Ala Ala Arg Ala Leu Val Lys Ala Leu Asp 385 390 395 400 Arg Leu Pro Leu Ala Asp Leu Thr Gln Leu Tyr Arg Ala Ile Gly Leu 405 410 415 Glu Leu Ser Gln Thr Met Gly Gly Ser Ser Gly Val Leu Leu Ala Ile 420 425 430 Phe Phe Ala Ala Ala Gly Asp Ala Ser Ser Ser Gly Arg Gly Ala Ile 435 440 445 Gly Ala Leu Lys Ala Gly Leu Asp Arg Ile Met Gln Val Gly Gly Ala 450 455 460 Gln Pro Gly Asp Arg Thr Met Ile Asp Ala Leu Leu Pro Ala Leu Asn 465 470 475 480 Ala Leu Glu Asn Gly Ile Glu Ala Ala Ala Ser Glu Ala Arg Gln Gly 485 490 495 Ala Asp Ala Thr Ser Arg Ile Thr Arg Ala Arg Ala Gly Arg Ala Ser 500 505 510 Tyr Val Ser Glu Ala Ser Leu Ser Gly His Asn Asp Pro Gly Ala Glu 515 520 525 Ala Val Ala Arg Leu Phe Glu Gln Leu Thr Leu Ser Pro Ala Leu Thr 530 535 540 Ser Lys Ser Ala 545 561641DNARhizobium leguminosarumCDS(1)..(1641) 56atg aaa cac ttc ttc aac cgc agg gaa aac atc gtc acc gaa gcc ttg 48Met Lys His Phe Phe Asn Arg Arg Glu Asn Ile Val Thr Glu Ala Leu 1 5 10 15 gac ggt ctg ctt ctg acg agc agc aag ggt cgt ctt gcc cgc ctc gac 96Asp Gly Leu Leu Leu Thr Ser Ser Lys Gly Arg Leu Ala Arg Leu Asp 20 25 30 agc ttt ccc gac atc aag gtg atc ctg cgc gct gac tgg gac aag tcg 144Ser Phe Pro Asp Ile Lys Val Ile Leu Arg Ala Asp Trp Asp Lys Ser 35 40 45 aag gtg gcg atc atc tca ggc ggc ggc gcc ggt cat gag ccc tcc cat 192Lys Val Ala Ile Ile Ser Gly Gly Gly Ala Gly His Glu Pro Ser His 50 55 60 gcc ggc ttc gtc ggt aag ggc atg ctg acg gct gcc gta tcc ggc gag 240Ala Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val Ser Gly Glu 65 70 75 80 att ttc gcc tcg ccg agc gtc gat gcc gtg ctg aca gcg atc cgc gcc 288Ile Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala Ile Arg Ala 85

90 95 gtc gcc ggc gaa aag ggc gcc ttg ctg atc gtc aag aac tat acc ggc 336Val Ala Gly Glu Lys Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly 100 105 110 gac cgg ctg aat ttc ggc ctc gcc gcc gag aag gcg cgc gcc gaa ggt 384Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg Ala Glu Gly 115 120 125 ttc gac gtc gaa atg gtc atc gtc gcc gac gat atc gcc atc ccc gag 432Phe Asp Val Glu Met Val Ile Val Ala Asp Asp Ile Ala Ile Pro Glu 130 135 140 atc aac cag ccg cgc ggc gtc gcc ggg act ctg ttc gtc cac aag atc 480Ile Asn Gln Pro Arg Gly Val Ala Gly Thr Leu Phe Val His Lys Ile 145 150 155 160 gct ggc tat cac gcc gaa agg ggc gag gac ctg aag acg gtc gca gcc 528Ala Gly Tyr His Ala Glu Arg Gly Glu Asp Leu Lys Thr Val Ala Ala 165 170 175 cat gcc gcg gca gcg gcc ggc gac atc gtc tcg ctc ggc atg tct ctg 576His Ala Ala Ala Ala Ala Gly Asp Ile Val Ser Leu Gly Met Ser Leu 180 185 190 tcc acc tgc agc gtg ccc ggc cag gcg cat gag agc cgc ctc ggc gag 624Ser Thr Cys Ser Val Pro Gly Gln Ala His Glu Ser Arg Leu Gly Glu 195 200 205 aac gag ggc gaa ctc ggt ctc ggc atc cat ggc gag ccc ggc gtc gag 672Asn Glu Gly Glu Leu Gly Leu Gly Ile His Gly Glu Pro Gly Val Glu 210 215 220 cgc att gcg ctg cag ccg gtc gtc gat atc gtc gcc acc atg gtg gcg 720Arg Ile Ala Leu Gln Pro Val Val Asp Ile Val Ala Thr Met Val Ala 225 230 235 240 cgc cta tcg cct gcg ctg cgc gaa ggg gga aac cac gcc ctt ctc atc 768Arg Leu Ser Pro Ala Leu Arg Glu Gly Gly Asn His Ala Leu Leu Ile 245 250 255 aac aat ctc ggc gcc gta ccg ccg ctc gaa atg acc gtt att gcc aat 816Asn Asn Leu Gly Ala Val Pro Pro Leu Glu Met Thr Val Ile Ala Asn 260 265 270 gtg gtg ctg tcc tcg tcg ctt gcc gat cgc gtc agg ctg atc atc ggc 864Val Val Leu Ser Ser Ser Leu Ala Asp Arg Val Arg Leu Ile Ile Gly 275 280 285 ccg gcg ccg atg atg acc gcg ctc aac atg aac ggc ttc tcg ctg tcg 912Pro Ala Pro Met Met Thr Ala Leu Asn Met Asn Gly Phe Ser Leu Ser 290 295 300 ctg atc cga ctg gat gcc gct cgc gag gcg gcg ctg acg gca gcg gtc 960Leu Ile Arg Leu Asp Ala Ala Arg Glu Ala Ala Leu Thr Ala Ala Val 305 310 315 320 gaa ccg cat gcc tgg atg cca gcc gtc gaa cgc cac gag atc agg gtc 1008Glu Pro His Ala Trp Met Pro Ala Val Glu Arg His Glu Ile Arg Val 325 330 335 atc gcc gca ccg cga aca tca gcc gga ctg aac ggc gcg cca gtg gcc 1056Ile Ala Ala Pro Arg Thr Ser Ala Gly Leu Asn Gly Ala Pro Val Ala 340 345 350 ggg gat aat ctc cgc aac cgg cgt ctg atc aca gcg ctc tgc gag cat 1104Gly Asp Asn Leu Arg Asn Arg Arg Leu Ile Thr Ala Leu Cys Glu His 355 360 365 ctg atc tcg cag gaa agc gaa ctc aac cgg ctg gat ggc cgc gtc ggc 1152Leu Ile Ser Gln Glu Ser Glu Leu Asn Arg Leu Asp Gly Arg Val Gly 370 375 380 gac ggt gat acc ggc tcg acg gtg gcg aca ggc gcc cgc agc gtg ctt 1200Asp Gly Asp Thr Gly Ser Thr Val Ala Thr Gly Ala Arg Ser Val Leu 385 390 395 400 gcc cgc ctg gac acg ctg ccg ctt gat cgg ccg gct gca acg ctt gcc 1248Ala Arg Leu Asp Thr Leu Pro Leu Asp Arg Pro Ala Ala Thr Leu Ala 405 410 415 tcg ctc ggc gac atc ctc ggc acc agc atg ggc gga tcg agc ggc gtg 1296Ser Leu Gly Asp Ile Leu Gly Thr Ser Met Gly Gly Ser Ser Gly Val 420 425 430 ctg ctg tcg atc ttc ttc acc gca gcg gca aag gcg atg gcc gac aag 1344Leu Leu Ser Ile Phe Phe Thr Ala Ala Ala Lys Ala Met Ala Asp Lys 435 440 445 gcc gat ata tca gca gcc ctt att gcc ggg ctc gac agg atg acg ttc 1392Ala Asp Ile Ser Ala Ala Leu Ile Ala Gly Leu Asp Arg Met Thr Phe 450 455 460 tat ggc gga gcc gaa gtc ggc gac cgg acg atg gtc gat gcg ctg tcg 1440Tyr Gly Gly Ala Glu Val Gly Asp Arg Thr Met Val Asp Ala Leu Ser 465 470 475 480 cct gcc ctg cag gcg ctc gca tcc ggc gat gtc gcg gca gcg gcc agg 1488Pro Ala Leu Gln Ala Leu Ala Ser Gly Asp Val Ala Ala Ala Ala Arg 485 490 495 gct gct gcc gca ggt gcg gag tcg acg aag acg atg atg aaa gcg aga 1536Ala Ala Ala Ala Gly Ala Glu Ser Thr Lys Thr Met Met Lys Ala Arg 500 505 510 gcc ggc cgc gcc tcc tat gtc ggc gaa agg gat ctg gca ggt gtc gct 1584Ala Gly Arg Ala Ser Tyr Val Gly Glu Arg Asp Leu Ala Gly Val Ala 515 520 525 gat ccc ggc gcc gtc gcg gtt gcc ggc gcg ttc ggt gtg gcg gca agc 1632Asp Pro Gly Ala Val Ala Val Ala Gly Ala Phe Gly Val Ala Ala Ser 530 535 540 ctc gcc tga 1641Leu Ala 545 57546PRTRhizobium leguminosarum 57Met Lys His Phe Phe Asn Arg Arg Glu Asn Ile Val Thr Glu Ala Leu 1 5 10 15 Asp Gly Leu Leu Leu Thr Ser Ser Lys Gly Arg Leu Ala Arg Leu Asp 20 25 30 Ser Phe Pro Asp Ile Lys Val Ile Leu Arg Ala Asp Trp Asp Lys Ser 35 40 45 Lys Val Ala Ile Ile Ser Gly Gly Gly Ala Gly His Glu Pro Ser His 50 55 60 Ala Gly Phe Val Gly Lys Gly Met Leu Thr Ala Ala Val Ser Gly Glu 65 70 75 80 Ile Phe Ala Ser Pro Ser Val Asp Ala Val Leu Thr Ala Ile Arg Ala 85 90 95 Val Ala Gly Glu Lys Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly 100 105 110 Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Lys Ala Arg Ala Glu Gly 115 120 125 Phe Asp Val Glu Met Val Ile Val Ala Asp Asp Ile Ala Ile Pro Glu 130 135 140 Ile Asn Gln Pro Arg Gly Val Ala Gly Thr Leu Phe Val His Lys Ile 145 150 155 160 Ala Gly Tyr His Ala Glu Arg Gly Glu Asp Leu Lys Thr Val Ala Ala 165 170 175 His Ala Ala Ala Ala Ala Gly Asp Ile Val Ser Leu Gly Met Ser Leu 180 185 190 Ser Thr Cys Ser Val Pro Gly Gln Ala His Glu Ser Arg Leu Gly Glu 195 200 205 Asn Glu Gly Glu Leu Gly Leu Gly Ile His Gly Glu Pro Gly Val Glu 210 215 220 Arg Ile Ala Leu Gln Pro Val Val Asp Ile Val Ala Thr Met Val Ala 225 230 235 240 Arg Leu Ser Pro Ala Leu Arg Glu Gly Gly Asn His Ala Leu Leu Ile 245 250 255 Asn Asn Leu Gly Ala Val Pro Pro Leu Glu Met Thr Val Ile Ala Asn 260 265 270 Val Val Leu Ser Ser Ser Leu Ala Asp Arg Val Arg Leu Ile Ile Gly 275 280 285 Pro Ala Pro Met Met Thr Ala Leu Asn Met Asn Gly Phe Ser Leu Ser 290 295 300 Leu Ile Arg Leu Asp Ala Ala Arg Glu Ala Ala Leu Thr Ala Ala Val 305 310 315 320 Glu Pro His Ala Trp Met Pro Ala Val Glu Arg His Glu Ile Arg Val 325 330 335 Ile Ala Ala Pro Arg Thr Ser Ala Gly Leu Asn Gly Ala Pro Val Ala 340 345 350 Gly Asp Asn Leu Arg Asn Arg Arg Leu Ile Thr Ala Leu Cys Glu His 355 360 365 Leu Ile Ser Gln Glu Ser Glu Leu Asn Arg Leu Asp Gly Arg Val Gly 370 375 380 Asp Gly Asp Thr Gly Ser Thr Val Ala Thr Gly Ala Arg Ser Val Leu 385 390 395 400 Ala Arg Leu Asp Thr Leu Pro Leu Asp Arg Pro Ala Ala Thr Leu Ala 405 410 415 Ser Leu Gly Asp Ile Leu Gly Thr Ser Met Gly Gly Ser Ser Gly Val 420 425 430 Leu Leu Ser Ile Phe Phe Thr Ala Ala Ala Lys Ala Met Ala Asp Lys 435 440 445 Ala Asp Ile Ser Ala Ala Leu Ile Ala Gly Leu Asp Arg Met Thr Phe 450 455 460 Tyr Gly Gly Ala Glu Val Gly Asp Arg Thr Met Val Asp Ala Leu Ser 465 470 475 480 Pro Ala Leu Gln Ala Leu Ala Ser Gly Asp Val Ala Ala Ala Ala Arg 485 490 495 Ala Ala Ala Ala Gly Ala Glu Ser Thr Lys Thr Met Met Lys Ala Arg 500 505 510 Ala Gly Arg Ala Ser Tyr Val Gly Glu Arg Asp Leu Ala Gly Val Ala 515 520 525 Asp Pro Gly Ala Val Ala Val Ala Gly Ala Phe Gly Val Ala Ala Ser 530 535 540 Leu Ala 545 581701DNAMyxococcus xanthusCDS(1)..(1701) 58atg aag aag ctg gtc aac gcc cct cgc gcg gtg gtg cgg gag atg ctg 48Met Lys Lys Leu Val Asn Ala Pro Arg Ala Val Val Arg Glu Met Leu 1 5 10 15 gag ggg ttg gtc tcg ctc gcc ccc ggg cag gtg ctg ctg gac ggg gag 96Glu Gly Leu Val Ser Leu Ala Pro Gly Gln Val Leu Leu Asp Gly Glu 20 25 30 tcg gtg gtg ctc cgc gcc gac acg cct tcc gac gtc cgc gcg cgc aag 144Ser Val Val Leu Arg Ala Asp Thr Pro Ser Asp Val Arg Ala Arg Lys 35 40 45 gtg gct gtc atc tcc ggt ggc ggc agc ggc cat gag ccg gcg cac gcg 192Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Ala 50 55 60 ggc tac gtg ggc gcg ggc atg ctg gac gcg gcg gtg gcc ggt gac gtc 240Gly Tyr Val Gly Ala Gly Met Leu Asp Ala Ala Val Ala Gly Asp Val 65 70 75 80 ttc acc tcg ccc agc acc gat gcc gtg ctg gcc gcc atc cgc gcc gtc 288Phe Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala Val 85 90 95 gcg ggg ccc gcg ggc gcg ctg ctc gtc gtg aag aac tac acc ggg gac 336Ala Gly Pro Ala Gly Ala Leu Leu Val Val Lys Asn Tyr Thr Gly Asp 100 105 110 cgg ctc aac ttc ggg ctc gcc gcc gag ctg gcg cgc gcc gag ggc atc 384Arg Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile 115 120 125 ccc gtg gag acg gtg gtg gtg gcg gac gac gtg tcc ctg cac gac acg 432Pro Val Glu Thr Val Val Val Ala Asp Asp Val Ser Leu His Asp Thr 130 135 140 gtg gag ccc gcg cgg cgc cgg ggc atc gct ggc acg gtg ctg gtc cac 480Val Glu Pro Ala Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His 145 150 155 160 aag gtc gcg ggc gcg gcg gcc gag gcg ggc gcg gcg ctc cag gac gtc 528Lys Val Ala Gly Ala Ala Ala Glu Ala Gly Ala Ala Leu Gln Asp Val 165 170 175 ctc cgc gag gcc acc gcg gcg gcg gag gtg ctg ggc acc atg ggc gtg 576Leu Arg Glu Ala Thr Ala Ala Ala Glu Val Leu Gly Thr Met Gly Val 180 185 190 gcc ctg ggg ccc tgc acc gtg ccc gcg gcg ggc aag ccg ggc ttc acg 624Ala Leu Gly Pro Cys Thr Val Pro Ala Ala Gly Lys Pro Gly Phe Thr 195 200 205 ctg gag gag gac gaa atc gag ctg ggc ctg ggc atc cac ggc gag cag 672Leu Glu Glu Asp Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Gln 210 215 220 ggc gtg cgg cgc gtg ccg atg cag acg gcg gac agc ctg gtg gac acg 720Gly Val Arg Arg Val Pro Met Gln Thr Ala Asp Ser Leu Val Asp Thr 225 230 235 240 ctg ctc acc acc atc gtc gag gac cgg cgc atc acc tcg gga gac agg 768Leu Leu Thr Thr Ile Val Glu Asp Arg Arg Ile Thr Ser Gly Asp Arg 245 250 255 gtg gtg ctg gtg gtc aac gga ttg ggc ggc acg ccg ccc atg gag ctg 816Val Val Leu Val Val Asn Gly Leu Gly Gly Thr Pro Pro Met Glu Leu 260 265 270 gcc atc gtc gcc cgg cgc gca ctg gcc gct ctg cgt cag ggc ggc atc 864Ala Ile Val Ala Arg Arg Ala Leu Ala Ala Leu Arg Gln Gly Gly Ile 275 280 285 cgc gtg gag cgc gcg tgg agc ggg acg ttc ctc tcc gcg ctg gag atg 912Arg Val Glu Arg Ala Trp Ser Gly Thr Phe Leu Ser Ala Leu Glu Met 290 295 300 ccc ggc tgc tcg ttg acg ctg ctg aag gtg gac gac gcg cgg ctg gcc 960Pro Gly Cys Ser Leu Thr Leu Leu Lys Val Asp Asp Ala Arg Leu Ala 305 310 315 320 cgc ctg gat gcg gcg gtg gat gcg ccc gcg tgg ccc ggc gcg gga cgg 1008Arg Leu Asp Ala Ala Val Asp Ala Pro Ala Trp Pro Gly Ala Gly Arg 325 330 335 ctg ccg aag gag ccg ggg gtg tac cgg cct tcg tcc acg gcg tct cca 1056Leu Pro Lys Glu Pro Gly Val Tyr Arg Pro Ser Ser Thr Ala Ser Pro 340 345 350 gca tcg ctt ccg gcg gag gcg ccg caa ccg ggg atg gac cgc ttc cgg 1104Ala Ser Leu Pro Ala Glu Ala Pro Gln Pro Gly Met Asp Arg Phe Arg 355 360 365 aag gcc gcc ttg cgg gtg gcg gac gca ttc gag cag tcg gag ccc cgg 1152Lys Ala Ala Leu Arg Val Ala Asp Ala Phe Glu Gln Ser Glu Pro Arg 370 375 380 ctg acc gcg ctc gat agc gcc gcg ggc gac ggt gac ctg ggc ctc agt 1200Leu Thr Ala Leu Asp Ser Ala Ala Gly Asp Gly Asp Leu Gly Leu Ser 385 390 395 400 ctg gtg cgt ggc gcc gag gcg att cgc gct ctt ccg gag gac gcg tgg 1248Leu Val Arg Gly Ala Glu Ala Ile Arg Ala Leu Pro Glu Asp Ala Trp 405 410 415 acg agc ccc gcg cgt gcg ctg acg gcc att ggc aat gcc ttg cgg cgc 1296Thr Ser Pro Ala Arg Ala Leu Thr Ala Ile Gly Asn Ala Leu Arg Arg 420 425 430 agc att ggc ggc agc tcg ggg ccc ttc tac gcg acg gcg ctg ctg cgc 1344Ser Ile Gly Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu Arg 435 440 445 gcc gcg cgc agg ctg gcg gaa ggg ccc gtg gat gcc gcc gca tgg gcc 1392Ala Ala Arg Arg Leu Ala Glu Gly Pro Val Asp Ala Ala Ala Trp Ala 450 455 460 gag gcc ttc gac ctc gcc gtc acc gcc gta tcg gag ctg ggc ggc gcg 1440Glu Ala Phe Asp Leu Ala Val Thr Ala Val Ser Glu Leu Gly Gly Ala 465 470 475 480 cgg cct ggg gac cgc acc atg ctc gat gca ctc cgg ccc gcc gcc gac 1488Arg Pro Gly Asp Arg Thr Met Leu Asp Ala Leu Arg Pro Ala Ala Asp 485 490 495 gcc ttc gcg aag gcg gtg cgt tgc ggg cag ggg gct cgc gag gcc tgg 1536Ala Phe Ala Lys Ala Val Arg Cys Gly Gln Gly Ala Arg Glu Ala Trp 500 505 510 gcc tcg gcg gtg cac gcg gcc gag gcg gga gag gag gcg acg tcc cgg 1584Ala Ser Ala Val His Ala Ala Glu Ala Gly Glu Glu Ala Thr Ser Arg 515 520 525 atg cag ccg cgc ctg gga cgc gcc agc tac ctg ggt gcg cgc gcc gtc 1632Met Gln Pro Arg Leu Gly Arg Ala Ser Tyr Leu Gly Ala Arg Ala Val 530 535 540 ggt gtg ccg gac gcg ggc gcc gcg gcc gtg gtg gtg tgg atg aag gcg 1680Gly Val Pro Asp Ala Gly Ala Ala Ala Val Val Val Trp Met Lys Ala

545 550 555 560 ctc acg cct ggc atc ggc tga 1701Leu Thr Pro Gly Ile Gly 565 59566PRTMyxococcus xanthus 59Met Lys Lys Leu Val Asn Ala Pro Arg Ala Val Val Arg Glu Met Leu 1 5 10 15 Glu Gly Leu Val Ser Leu Ala Pro Gly Gln Val Leu Leu Asp Gly Glu 20 25 30 Ser Val Val Leu Arg Ala Asp Thr Pro Ser Asp Val Arg Ala Arg Lys 35 40 45 Val Ala Val Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Ala 50 55 60 Gly Tyr Val Gly Ala Gly Met Leu Asp Ala Ala Val Ala Gly Asp Val 65 70 75 80 Phe Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala Val 85 90 95 Ala Gly Pro Ala Gly Ala Leu Leu Val Val Lys Asn Tyr Thr Gly Asp 100 105 110 Arg Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile 115 120 125 Pro Val Glu Thr Val Val Val Ala Asp Asp Val Ser Leu His Asp Thr 130 135 140 Val Glu Pro Ala Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His 145 150 155 160 Lys Val Ala Gly Ala Ala Ala Glu Ala Gly Ala Ala Leu Gln Asp Val 165 170 175 Leu Arg Glu Ala Thr Ala Ala Ala Glu Val Leu Gly Thr Met Gly Val 180 185 190 Ala Leu Gly Pro Cys Thr Val Pro Ala Ala Gly Lys Pro Gly Phe Thr 195 200 205 Leu Glu Glu Asp Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Gln 210 215 220 Gly Val Arg Arg Val Pro Met Gln Thr Ala Asp Ser Leu Val Asp Thr 225 230 235 240 Leu Leu Thr Thr Ile Val Glu Asp Arg Arg Ile Thr Ser Gly Asp Arg 245 250 255 Val Val Leu Val Val Asn Gly Leu Gly Gly Thr Pro Pro Met Glu Leu 260 265 270 Ala Ile Val Ala Arg Arg Ala Leu Ala Ala Leu Arg Gln Gly Gly Ile 275 280 285 Arg Val Glu Arg Ala Trp Ser Gly Thr Phe Leu Ser Ala Leu Glu Met 290 295 300 Pro Gly Cys Ser Leu Thr Leu Leu Lys Val Asp Asp Ala Arg Leu Ala 305 310 315 320 Arg Leu Asp Ala Ala Val Asp Ala Pro Ala Trp Pro Gly Ala Gly Arg 325 330 335 Leu Pro Lys Glu Pro Gly Val Tyr Arg Pro Ser Ser Thr Ala Ser Pro 340 345 350 Ala Ser Leu Pro Ala Glu Ala Pro Gln Pro Gly Met Asp Arg Phe Arg 355 360 365 Lys Ala Ala Leu Arg Val Ala Asp Ala Phe Glu Gln Ser Glu Pro Arg 370 375 380 Leu Thr Ala Leu Asp Ser Ala Ala Gly Asp Gly Asp Leu Gly Leu Ser 385 390 395 400 Leu Val Arg Gly Ala Glu Ala Ile Arg Ala Leu Pro Glu Asp Ala Trp 405 410 415 Thr Ser Pro Ala Arg Ala Leu Thr Ala Ile Gly Asn Ala Leu Arg Arg 420 425 430 Ser Ile Gly Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu Arg 435 440 445 Ala Ala Arg Arg Leu Ala Glu Gly Pro Val Asp Ala Ala Ala Trp Ala 450 455 460 Glu Ala Phe Asp Leu Ala Val Thr Ala Val Ser Glu Leu Gly Gly Ala 465 470 475 480 Arg Pro Gly Asp Arg Thr Met Leu Asp Ala Leu Arg Pro Ala Ala Asp 485 490 495 Ala Phe Ala Lys Ala Val Arg Cys Gly Gln Gly Ala Arg Glu Ala Trp 500 505 510 Ala Ser Ala Val His Ala Ala Glu Ala Gly Glu Glu Ala Thr Ser Arg 515 520 525 Met Gln Pro Arg Leu Gly Arg Ala Ser Tyr Leu Gly Ala Arg Ala Val 530 535 540 Gly Val Pro Asp Ala Gly Ala Ala Ala Val Val Val Trp Met Lys Ala 545 550 555 560 Leu Thr Pro Gly Ile Gly 565 601701DNABurkholderia sp. 383CDS(1)..(1701) 60atg aaa aag ctt gtc aac cgc ccg tcc gat gtc gtg cga gaa atg ctg 48Met Lys Lys Leu Val Asn Arg Pro Ser Asp Val Val Arg Glu Met Leu 1 5 10 15 gaa ggc atc gcg cgg cag tcg ccg cat gtc gcg atc ctc ggc gac gag 96Glu Gly Ile Ala Arg Gln Ser Pro His Val Ala Ile Leu Gly Asp Glu 20 25 30 cac gtg ctc gtc cgc cag ccg ctg ccc gag ccc gcg caa cgc ccc gtc 144His Val Leu Val Arg Gln Pro Leu Pro Glu Pro Ala Gln Arg Pro Val 35 40 45 gcc atc ctg tcc ggt ggc ggc agc ggc cac gag ccc gcg cac ggc ggc 192Ala Ile Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Gly Gly 50 55 60 tat gtc ggc gaa gga atg ctg agc gcg gcc gtc tgc ggc gaa gtg ttc 240Tyr Val Gly Glu Gly Met Leu Ser Ala Ala Val Cys Gly Glu Val Phe 65 70 75 80 acg tcg ccg tcc aca gac gcc gtg ctc gcc gcg atc cgc gcg agc gcc 288Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala Ser Ala 85 90 95 ggc ccg aac ggc gcc ttg ctg atc gtg aag aac tac acg ggc gac cgg 336Gly Pro Asn Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 ctc aat ttc ggg ctc gcc gcc gaa ctc gca cgc gcc gaa ggc att ccg 384Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile Pro 115 120 125 gtc gag acg gtc atc gtc gcc gac gac gta tcg ctg cgc ggc cgc gtc 432Val Glu Thr Val Ile Val Ala Asp Asp Val Ser Leu Arg Gly Arg Val 130 135 140 gag cgc ggc cag cgg cgc ggg atc gcc ggt acc gtg ctg atc cac aag 480Glu Arg Gly Gln Arg Arg Gly Ile Ala Gly Thr Val Leu Ile His Lys 145 150 155 160 ctc gcc ggc gcg gca gcc gcg cgc ggg ctg ccg ctc gcc cgc gtc gcg 528Leu Ala Gly Ala Ala Ala Ala Arg Gly Leu Pro Leu Ala Arg Val Ala 165 170 175 gcc atc gcg cgc gac gcg gcg gcc gaa ctc ggc acg atg ggt gtc gca 576Ala Ile Ala Arg Asp Ala Ala Ala Glu Leu Gly Thr Met Gly Val Ala 180 185 190 ctc gac ggc tgc acg atc ccg ggc gcc gac aag tcg ggc ttc agc ctc 624Leu Asp Gly Cys Thr Ile Pro Gly Ala Asp Lys Ser Gly Phe Ser Leu 195 200 205 ggc gat cac gag atc gaa ctc ggc ctc ggc atc cat ggc gag aaa ggc 672Gly Asp His Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Lys Gly 210 215 220 gtc gag cgc cgc gcg ccg ctg ccg gcc gat gcg ctt gtc gac acg ctg 720Val Glu Arg Arg Ala Pro Leu Pro Ala Asp Ala Leu Val Asp Thr Leu 225 230 235 240 ctg tcg agc atc gcc gcc gat ctc gtg ctc gac cgc ggc gaa cgc gtt 768Leu Ser Ser Ile Ala Ala Asp Leu Val Leu Asp Arg Gly Glu Arg Val 245 250 255 gcg ctg ttc gtc aac ggc ctc ggc gcg acg ccg gac atg gaa ctc gcg 816Ala Leu Phe Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu Leu Ala 260 265 270 atc gtg ctg cgc gcc gcg cac gac aac ctg cac cgg cgc ggc atc gtc 864Ile Val Leu Arg Ala Ala His Asp Asn Leu His Arg Arg Gly Ile Val 275 280 285 gtc gcg cgt gcg tgg gcc ggc acg ttc ctg tcg gcg ctg aac atg ccc 912Val Ala Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asn Met Pro 290 295 300 ggc tgc tcg atc tcg gtg ctg cgg ctg aac gac gaa cgc gcg gtg ctg 960Gly Cys Ser Ile Ser Val Leu Arg Leu Asn Asp Glu Arg Ala Val Leu 305 310 315 320 ctc gac gca ccg acg cag gcg cgt gca tgg cca ggc ggc ggc gcg gtg 1008Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly Ala Val 325 330 335 aat acg cag atc cgt gtg gcc tcg gcc gcc gtg cag gaa gcg ccg ttg 1056Asn Thr Gln Ile Arg Val Ala Ser Ala Ala Val Gln Glu Ala Pro Leu 340 345 350 ccg ccg ctc gat gcg gcc ggc cgc gcg tgg gcc gcg cgc ctg caa ccg 1104Pro Pro Leu Asp Ala Ala Gly Arg Ala Trp Ala Ala Arg Leu Gln Pro 355 360 365 gca ttg cac gcg gtc gcg caa acg ctg atc gat cac gag cag acg ctg 1152Ala Leu His Ala Val Ala Gln Thr Leu Ile Asp His Glu Gln Thr Leu 370 375 380 acc gac ctc gat gcg gcg gcc ggc gac ggc gat ctc ggc gcg agc atg 1200Thr Asp Leu Asp Ala Ala Ala Gly Asp Gly Asp Leu Gly Ala Ser Met 385 390 395 400 ctg cgc gcc gcg cag gcg atc ctc gca ctg ccg gaa agc gca tac ggc 1248Leu Arg Ala Ala Gln Ala Ile Leu Ala Leu Pro Glu Ser Ala Tyr Gly 405 410 415 acg ccg gcc ggc gcg ctc tcg gcg ctc ggc gcc gcg ttg cgc cgc gcg 1296Thr Pro Ala Gly Ala Leu Ser Ala Leu Gly Ala Ala Leu Arg Arg Ala 420 425 430 atc gcc ggc agc tcg ggg ccg ttc tat gcg acc gcg ctg ctg cgc gcg 1344Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu Arg Ala 435 440 445 tcg cgc cgg ctg gcc gat atc gcc gag ccg tcc gca cgc gac tgg gcc 1392Ser Arg Arg Leu Ala Asp Ile Ala Glu Pro Ser Ala Arg Asp Trp Ala 450 455 460 gcg gcg ttc cgc ggc gcg gtg gat tcg atc agc gaa ctg ggc ggc gcg 1440Ala Ala Phe Arg Gly Ala Val Asp Ser Ile Ser Glu Leu Gly Gly Ala 465 470 475 480 cac gcc ggc gac cgg acc atg ctc gat gcg ctg gtc ccg gcc gtc gcg 1488His Ala Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala Val Ala 485 490 495 gca ttc gag cgg gcg ctc gac aac gat cgc gat ccc gcc ggc gca tgg 1536Ala Phe Glu Arg Ala Leu Asp Asn Asp Arg Asp Pro Ala Gly Ala Trp 500 505 510 acg gcc gcg gtc gaa gcc gcc gag cac ggt gcg cag gaa acc gca cgc 1584Thr Ala Ala Val Glu Ala Ala Glu His Gly Ala Gln Glu Thr Ala Arg 515 520 525 atg acg cca cgc gcc ggg cgc gcg agc tat ctc ggc gaa cgt gcg atc 1632Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala Ile 530 535 540 ggc acg ccg gac ggc ggc gcg gtc gcg gtg tcg tat tgg ctg cgt gcg 1680Gly Thr Pro Asp Gly Gly Ala Val Ala Val Ser Tyr Trp Leu Arg Ala 545 550 555 560 ttg cag gca cac atc ggg tga 1701Leu Gln Ala His Ile Gly 565 61566PRTBurkholderia sp. 383 61Met Lys Lys Leu Val Asn Arg Pro Ser Asp Val Val Arg Glu Met Leu 1 5 10 15 Glu Gly Ile Ala Arg Gln Ser Pro His Val Ala Ile Leu Gly Asp Glu 20 25 30 His Val Leu Val Arg Gln Pro Leu Pro Glu Pro Ala Gln Arg Pro Val 35 40 45 Ala Ile Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Gly Gly 50 55 60 Tyr Val Gly Glu Gly Met Leu Ser Ala Ala Val Cys Gly Glu Val Phe 65 70 75 80 Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala Ser Ala 85 90 95 Gly Pro Asn Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly Ile Pro 115 120 125 Val Glu Thr Val Ile Val Ala Asp Asp Val Ser Leu Arg Gly Arg Val 130 135 140 Glu Arg Gly Gln Arg Arg Gly Ile Ala Gly Thr Val Leu Ile His Lys 145 150 155 160 Leu Ala Gly Ala Ala Ala Ala Arg Gly Leu Pro Leu Ala Arg Val Ala 165 170 175 Ala Ile Ala Arg Asp Ala Ala Ala Glu Leu Gly Thr Met Gly Val Ala 180 185 190 Leu Asp Gly Cys Thr Ile Pro Gly Ala Asp Lys Ser Gly Phe Ser Leu 195 200 205 Gly Asp His Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Lys Gly 210 215 220 Val Glu Arg Arg Ala Pro Leu Pro Ala Asp Ala Leu Val Asp Thr Leu 225 230 235 240 Leu Ser Ser Ile Ala Ala Asp Leu Val Leu Asp Arg Gly Glu Arg Val 245 250 255 Ala Leu Phe Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu Leu Ala 260 265 270 Ile Val Leu Arg Ala Ala His Asp Asn Leu His Arg Arg Gly Ile Val 275 280 285 Val Ala Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asn Met Pro 290 295 300 Gly Cys Ser Ile Ser Val Leu Arg Leu Asn Asp Glu Arg Ala Val Leu 305 310 315 320 Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly Ala Val 325 330 335 Asn Thr Gln Ile Arg Val Ala Ser Ala Ala Val Gln Glu Ala Pro Leu 340 345 350 Pro Pro Leu Asp Ala Ala Gly Arg Ala Trp Ala Ala Arg Leu Gln Pro 355 360 365 Ala Leu His Ala Val Ala Gln Thr Leu Ile Asp His Glu Gln Thr Leu 370 375 380 Thr Asp Leu Asp Ala Ala Ala Gly Asp Gly Asp Leu Gly Ala Ser Met 385 390 395 400 Leu Arg Ala Ala Gln Ala Ile Leu Ala Leu Pro Glu Ser Ala Tyr Gly 405 410 415 Thr Pro Ala Gly Ala Leu Ser Ala Leu Gly Ala Ala Leu Arg Arg Ala 420 425 430 Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu Arg Ala 435 440 445 Ser Arg Arg Leu Ala Asp Ile Ala Glu Pro Ser Ala Arg Asp Trp Ala 450 455 460 Ala Ala Phe Arg Gly Ala Val Asp Ser Ile Ser Glu Leu Gly Gly Ala 465 470 475 480 His Ala Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala Val Ala 485 490 495 Ala Phe Glu Arg Ala Leu Asp Asn Asp Arg Asp Pro Ala Gly Ala Trp 500 505 510 Thr Ala Ala Val Glu Ala Ala Glu His Gly Ala Gln Glu Thr Ala Arg 515 520 525 Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala Ile 530 535 540 Gly Thr Pro Asp Gly Gly Ala Val Ala Val Ser Tyr Trp Leu Arg Ala 545 550 555 560 Leu Gln Ala His Ile Gly 565 621704DNABurkholderia thailandensis E264CDS(1)..(1704) 62atg aag aag ctc gtc aac cac ccg tcc gac gtc gtg cgc gaa atg ctg 48Met Lys Lys Leu Val Asn His Pro Ser Asp Val Val Arg Glu Met Leu 1 5 10 15 gag ggc atc gcg cgg cag tcg ccg cat gtc gcg atg ctc ggc gac gaa 96Glu Gly Ile Ala Arg Gln Ser Pro His Val Ala Met Leu Gly Asp Glu 20 25 30 cac gtg ctg atc cgg cgc ccc ttg ccg gag ccg gcg cgg cgt gcg gtc 144His Val Leu Ile Arg Arg Pro Leu Pro Glu Pro Ala Arg Arg Ala Val 35 40 45 gcg atc atc tcc ggc ggc ggc agc ggc cac gag ccg gcg cac ggc ggc 192Ala Ile Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Gly Gly 50 55 60 tac gtc ggc gcg ggg atg ctg agc gcg gcc gtg tgc ggc gag gtc ttc 240Tyr Val Gly Ala Gly Met Leu Ser Ala Ala Val Cys Gly Glu Val Phe 65 70

75 80 acg tcg ccg ccc gcc gat gcg gtg ctc gcc gcg att cgc gcg acc gcg 288Thr Ser Pro Pro Ala Asp Ala Val Leu Ala Ala Ile Arg Ala Thr Ala 85 90 95 ggc cag aac ggc gcg ctc ctc atc gtg aag aac tac acg ggc gat cgc 336Gly Gln Asn Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 ctc aat ttc ggg ctc gcg gcc gag ctc gcg cgc gcg cag ggc att ccg 384Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Gln Gly Ile Pro 115 120 125 gtc gag atc gtc gtc gtc gcg gac gac gtg tcg ctg cgc gaa ctc acc 432Val Glu Ile Val Val Val Ala Asp Asp Val Ser Leu Arg Glu Leu Thr 130 135 140 gag cgc ggg cgc cgc cgc ggc atc gcc ggc acc gtg ctc gtg cac aag 480Glu Arg Gly Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His Lys 145 150 155 160 ctc gcc ggc gcg gcc gcc gag cgc ggc ctc gcg ctg cgg gag gtg gcc 528Leu Ala Gly Ala Ala Ala Glu Arg Gly Leu Ala Leu Arg Glu Val Ala 165 170 175 gcc gtc gcg agc gag gcg gcg gcg aat ctc ggc acg atg ggc gtc gca 576Ala Val Ala Ser Glu Ala Ala Ala Asn Leu Gly Thr Met Gly Val Ala 180 185 190 ctc gac ggc tgc acg att ccg ggc gcc ggg caa tcg ggc ttc cgc ctc 624Leu Asp Gly Cys Thr Ile Pro Gly Ala Gly Gln Ser Gly Phe Arg Leu 195 200 205 gcc gat cac gag atc gag ctc gga ttg ggc att cac ggc gaa aag ggc 672Ala Asp His Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Lys Gly 210 215 220 gtg cag cgc acg gcg ccg atg ccg gcc gac gcg ctg tcg gaa acg ctc 720Val Gln Arg Thr Ala Pro Met Pro Ala Asp Ala Leu Ser Glu Thr Leu 225 230 235 240 gtg gcg acg atc gtc gac gat cag gcg atc gcg cgc ggc gat cgg gtc 768Val Ala Thr Ile Val Asp Asp Gln Ala Ile Ala Arg Gly Asp Arg Val 245 250 255 gcg ctt ctg gtg aac ggg ctc ggc gcg acg ccg gac atg gag ctc ggc 816Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu Leu Gly 260 265 270 atc gtg ctg cgc gcg gcg tac gac agc ctg agc cgg cgt ggc gtc gag 864Ile Val Leu Arg Ala Ala Tyr Asp Ser Leu Ser Arg Arg Gly Val Glu 275 280 285 gtg gcg cgc gcg tgg gcg ggc acg ttc ctg tcc gcg ctc gac atg ccc 912Val Ala Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asp Met Pro 290 295 300 ggc tgc tcg att tcg ctg ctc aag ctg aac gat cgc atg ctc gaa ctg 960Gly Cys Ser Ile Ser Leu Leu Lys Leu Asn Asp Arg Met Leu Glu Leu 305 310 315 320 ctc gac gcg ccg acg caa gcg cga gcg tgg ccg ggc ggc ggc gcg gtg 1008Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly Ala Val 325 330 335 aac cgg gac att cgc gtg gcc gcc gcc ggg acc ggc gca gga gac gga 1056Asn Arg Asp Ile Arg Val Ala Ala Ala Gly Thr Gly Ala Gly Asp Gly 340 345 350 cag ccg gaa tgg gcg acg gcc ggc gcg gcg ggt tcc gac gga ctg cgg 1104Gln Pro Glu Trp Ala Thr Ala Gly Ala Ala Gly Ser Asp Gly Leu Arg 355 360 365 ccc gcg ctg cat gcg gtt gcc gcc gcg ctg atc gac agc gag ccc gtg 1152Pro Ala Leu His Ala Val Ala Ala Ala Leu Ile Asp Ser Glu Pro Val 370 375 380 ttg acc gag ctc gat tcc gtc gcc ggc gac ggc gat ctg ggc gcg agc 1200Leu Thr Glu Leu Asp Ser Val Ala Gly Asp Gly Asp Leu Gly Ala Ser 385 390 395 400 atg cgc cgc gcg gcg aac gcg atg ctc gcg ctg ccc gcc gat gcg tat 1248Met Arg Arg Ala Ala Asn Ala Met Leu Ala Leu Pro Ala Asp Ala Tyr 405 410 415 cga ggg ccg gcg aac ctg ctc gcc gcg ctg ggc atg gcg ctg cgc cgg 1296Arg Gly Pro Ala Asn Leu Leu Ala Ala Leu Gly Met Ala Leu Arg Arg 420 425 430 gcg atc gcg ggc agc tcc ggg ccg ttt tac gca acg gcg ctg gtg cgc 1344Ala Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Val Arg 435 440 445 gcg ggc cgc cgg ctc gcc gat gca tcg gcg ccg acc gcg cgc gac tgg 1392Ala Gly Arg Arg Leu Ala Asp Ala Ser Ala Pro Thr Ala Arg Asp Trp 450 455 460 gcg agc gcg ttc cgg agc ggt gtc gac gcg atc ggc gat ctg ggc ggc 1440Ala Ser Ala Phe Arg Ser Gly Val Asp Ala Ile Gly Asp Leu Gly Gly 465 470 475 480 gcg aag ccc gga gac cgc acg atg ctc gac gcc ttg gtg ccc gcc gtc 1488Ala Lys Pro Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala Val 485 490 495 gat gcg ttc gag cac gcg ctg tcg gcg ggc ggg agc gcg agc gat gcg 1536Asp Ala Phe Glu His Ala Leu Ser Ala Gly Gly Ser Ala Ser Asp Ala 500 505 510 tgg gcg gcg gcg gtg cgc gcc gcg gag gca ggc gcg gcg aaa acc gcg 1584Trp Ala Ala Ala Val Arg Ala Ala Glu Ala Gly Ala Ala Lys Thr Ala 515 520 525 ggc atg acg ccg cgc gcg ggg cgc gcg agc tat ctg ggc gag cgc gcc 1632Gly Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala 530 535 540 gtg ggc tcg ccc gac ggc ggc gcg gtg gcc gtg gcg tgc tgg atg cgc 1680Val Gly Ser Pro Asp Gly Gly Ala Val Ala Val Ala Cys Trp Met Arg 545 550 555 560 gcg ttg cag ccg cac gtc gcg tag 1704Ala Leu Gln Pro His Val Ala 565 63567PRTBurkholderia thailandensis E264 63Met Lys Lys Leu Val Asn His Pro Ser Asp Val Val Arg Glu Met Leu 1 5 10 15 Glu Gly Ile Ala Arg Gln Ser Pro His Val Ala Met Leu Gly Asp Glu 20 25 30 His Val Leu Ile Arg Arg Pro Leu Pro Glu Pro Ala Arg Arg Ala Val 35 40 45 Ala Ile Ile Ser Gly Gly Gly Ser Gly His Glu Pro Ala His Gly Gly 50 55 60 Tyr Val Gly Ala Gly Met Leu Ser Ala Ala Val Cys Gly Glu Val Phe 65 70 75 80 Thr Ser Pro Pro Ala Asp Ala Val Leu Ala Ala Ile Arg Ala Thr Ala 85 90 95 Gly Gln Asn Gly Ala Leu Leu Ile Val Lys Asn Tyr Thr Gly Asp Arg 100 105 110 Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Gln Gly Ile Pro 115 120 125 Val Glu Ile Val Val Val Ala Asp Asp Val Ser Leu Arg Glu Leu Thr 130 135 140 Glu Arg Gly Arg Arg Arg Gly Ile Ala Gly Thr Val Leu Val His Lys 145 150 155 160 Leu Ala Gly Ala Ala Ala Glu Arg Gly Leu Ala Leu Arg Glu Val Ala 165 170 175 Ala Val Ala Ser Glu Ala Ala Ala Asn Leu Gly Thr Met Gly Val Ala 180 185 190 Leu Asp Gly Cys Thr Ile Pro Gly Ala Gly Gln Ser Gly Phe Arg Leu 195 200 205 Ala Asp His Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu Lys Gly 210 215 220 Val Gln Arg Thr Ala Pro Met Pro Ala Asp Ala Leu Ser Glu Thr Leu 225 230 235 240 Val Ala Thr Ile Val Asp Asp Gln Ala Ile Ala Arg Gly Asp Arg Val 245 250 255 Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu Leu Gly 260 265 270 Ile Val Leu Arg Ala Ala Tyr Asp Ser Leu Ser Arg Arg Gly Val Glu 275 280 285 Val Ala Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asp Met Pro 290 295 300 Gly Cys Ser Ile Ser Leu Leu Lys Leu Asn Asp Arg Met Leu Glu Leu 305 310 315 320 Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly Ala Val 325 330 335 Asn Arg Asp Ile Arg Val Ala Ala Ala Gly Thr Gly Ala Gly Asp Gly 340 345 350 Gln Pro Glu Trp Ala Thr Ala Gly Ala Ala Gly Ser Asp Gly Leu Arg 355 360 365 Pro Ala Leu His Ala Val Ala Ala Ala Leu Ile Asp Ser Glu Pro Val 370 375 380 Leu Thr Glu Leu Asp Ser Val Ala Gly Asp Gly Asp Leu Gly Ala Ser 385 390 395 400 Met Arg Arg Ala Ala Asn Ala Met Leu Ala Leu Pro Ala Asp Ala Tyr 405 410 415 Arg Gly Pro Ala Asn Leu Leu Ala Ala Leu Gly Met Ala Leu Arg Arg 420 425 430 Ala Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Val Arg 435 440 445 Ala Gly Arg Arg Leu Ala Asp Ala Ser Ala Pro Thr Ala Arg Asp Trp 450 455 460 Ala Ser Ala Phe Arg Ser Gly Val Asp Ala Ile Gly Asp Leu Gly Gly 465 470 475 480 Ala Lys Pro Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala Val 485 490 495 Asp Ala Phe Glu His Ala Leu Ser Ala Gly Gly Ser Ala Ser Asp Ala 500 505 510 Trp Ala Ala Ala Val Arg Ala Ala Glu Ala Gly Ala Ala Lys Thr Ala 515 520 525 Gly Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg Ala 530 535 540 Val Gly Ser Pro Asp Gly Gly Ala Val Ala Val Ala Cys Trp Met Arg 545 550 555 560 Ala Leu Gln Pro His Val Ala 565 641851DNABurkholderia multivoransCDS(1)..(1851) 64atg tat cgt ggc acc gaa gcg cgc acc ggc gag atc cat ggc act gct 48Met Tyr Arg Gly Thr Glu Ala Arg Thr Gly Glu Ile His Gly Thr Ala 1 5 10 15 cca cgc cac cgc cgc cac ggc gcg cgc att ccc gca acc cga cag ccc 96Pro Arg His Arg Arg His Gly Ala Arg Ile Pro Ala Thr Arg Gln Pro 20 25 30 gag gcg ccg gat cgg ttc ggc ccg cgg gct ttc atc tgc ccg gaa acc 144Glu Ala Pro Asp Arg Phe Gly Pro Arg Ala Phe Ile Cys Pro Glu Thr 35 40 45 gtc gcc atg aaa aaa ctc gtg aac cgt ccg tcc gac gtc gtg cgt gaa 192Val Ala Met Lys Lys Leu Val Asn Arg Pro Ser Asp Val Val Arg Glu 50 55 60 atg ctc gaa ggc att gcg cga cag tcg ccg cat ctc gcg atg ctc ggc 240Met Leu Glu Gly Ile Ala Arg Gln Ser Pro His Leu Ala Met Leu Gly 65 70 75 80 gac gag cac gtg ctc gtc cgc cgc ccg ctg ccc gaa ccg tcg cag cgc 288Asp Glu His Val Leu Val Arg Arg Pro Leu Pro Glu Pro Ser Gln Arg 85 90 95 acg gtt gcg gtg ctg tcg ggc ggc ggc agc ggg cac gag cct gcg cac 336Thr Val Ala Val Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His 100 105 110 ggc ggc tat gtc ggc gac gga atg ctc agt gcg gcc gtg tgc ggc gaa 384Gly Gly Tyr Val Gly Asp Gly Met Leu Ser Ala Ala Val Cys Gly Glu 115 120 125 gtg ttc acg tcg ccg tcc acc gac gcg gtg ctc gcc gcg atc cgc gcg 432Val Phe Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala 130 135 140 acg gcc ggc ccg aac ggc gcg ctg ctc gtc gtg aag aac tac acc ggc 480Thr Ala Gly Pro Asn Gly Ala Leu Leu Val Val Lys Asn Tyr Thr Gly 145 150 155 160 gac cgg ctc aac ttc ggt ctg gca gcc gaa ctc gcg cgc gca gaa ggc 528Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly 165 170 175 att ccg gtc gag acc gtg atc gtc gcg gac gac gta tcg ctg cgc ggc 576Ile Pro Val Glu Thr Val Ile Val Ala Asp Asp Val Ser Leu Arg Gly 180 185 190 cgc gtc gag cgc gga cag cgg cgc ggc atc gcg ggc acc gtg ctg atc 624Arg Val Glu Arg Gly Gln Arg Arg Gly Ile Ala Gly Thr Val Leu Ile 195 200 205 cac aag ctc gcg ggc gcg gcg gcc gcg cgc ggg ctg tcg ctg ccg cgc 672His Lys Leu Ala Gly Ala Ala Ala Ala Arg Gly Leu Ser Leu Pro Arg 210 215 220 gtc gcg gcg atc gcg cgc gat gcg gcc gcc gat ctc ggc acg atg ggc 720Val Ala Ala Ile Ala Arg Asp Ala Ala Ala Asp Leu Gly Thr Met Gly 225 230 235 240 gtc gcg ctc gac ggc tgt acg ctg ccg ggc gcc gac cag tcc gga ttc 768Val Ala Leu Asp Gly Cys Thr Leu Pro Gly Ala Asp Gln Ser Gly Phe 245 250 255 agc ctc gcc gac gac gaa atc gag ctc ggt ctc ggc att cat ggc gaa 816Ser Leu Ala Asp Asp Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu 260 265 270 aaa ggc gtc gaa cgc acg gcg ccg ctg ccg gcc gac gcg ctc gcc gat 864Lys Gly Val Glu Arg Thr Ala Pro Leu Pro Ala Asp Ala Leu Ala Asp 275 280 285 acg ctg ctg tcc ggg atc gtc gcc gac ctc gtg ctc gat cgc ggc gaa 912Thr Leu Leu Ser Gly Ile Val Ala Asp Leu Val Leu Asp Arg Gly Glu 290 295 300 cgc gtc gcg ctg ctc gtc aac ggt ctc ggc gcg acg ccc gac atg gag 960Arg Val Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu 305 310 315 320 ctt gcg atc gtg ctg cgc gcc gcc tac gag aac ctg agc cgt cgc ggc 1008Leu Ala Ile Val Leu Arg Ala Ala Tyr Glu Asn Leu Ser Arg Arg Gly 325 330 335 atc gcg gtc gag cgc gcg tgg gcc ggt acg ttc ctg tcg gcg ctg aac 1056Ile Ala Val Glu Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asn 340 345 350 atg ccc ggc tgt tcg atc tcg gtg ctg cgg ctc gac gac gag cgg gcg 1104Met Pro Gly Cys Ser Ile Ser Val Leu Arg Leu Asp Asp Glu Arg Ala 355 360 365 gcg ctg ctc gac gca ccg acg caa gcg cgc gcg tgg ccc ggc ggc ggc 1152Ala Leu Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly 370 375 380 gcc gtc aac gca cag atc cgc atc gcc gcc gcg gcg ccg cag gaa ccg 1200Ala Val Asn Ala Gln Ile Arg Ile Ala Ala Ala Ala Pro Gln Glu Pro 385 390 395 400 tcg ccg ccg ccg ctc gac gcg gcg ggc cgc gtg tgg gcc gag cgg ctg 1248Ser Pro Pro Pro Leu Asp Ala Ala Gly Arg Val Trp Ala Glu Arg Leu 405 410 415 cgc ccg gcg ctg cac gcg gtc gcg cac acg ctg atc gac cac gaa gca 1296Arg Pro Ala Leu His Ala Val Ala His Thr Leu Ile Asp His Glu Ala 420 425 430 acg ctg acc gag ctc gat gcc gcc gcc ggc gac ggc gac ctc ggc gcg 1344Thr Leu Thr Glu Leu Asp Ala Ala Ala Gly Asp Gly Asp Leu Gly Ala 435 440 445 agc atg cgt cgt gcc gcg gac gcg atg ctc gcg ttg ccg gaa acc gcg 1392Ser Met Arg Arg Ala Ala Asp Ala Met Leu Ala Leu Pro Glu Thr Ala 450 455 460 tat gcg acg ccg gcc ggt gcg ctc gcc gcg ctc ggc gcc gcg ctg cgc 1440Tyr Ala Thr Pro Ala Gly Ala Leu Ala Ala Leu Gly Ala Ala Leu Arg 465 470 475 480 cgt gcg atc gcg ggc agc tcg ggc ccc ttc tac gcg acc gcg ctg ctg 1488Arg Ala Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu 485 490 495 cgc gca tcg cgg cgc ctg gcc ggc ctc gcg cag ccg tcg gca cgc gac 1536Arg Ala Ser Arg Arg Leu Ala Gly Leu Ala Gln Pro Ser Ala Arg Asp 500 505 510

tgg gcc gcg gca ttg cgc agc gca gcc gat gcg atc gcc gaa ctc ggc 1584Trp Ala Ala Ala Leu Arg Ser Ala Ala Asp Ala Ile Ala Glu Leu Gly 515 520 525 ggc gcc cgt gcc ggt gac aga acg atg ctc gac gcg ctg gtg ccg gcc 1632Gly Ala Arg Ala Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala 530 535 540 gcc gcc gcg ttc gac cgt gca ctc gac gac ggt cgc gac agc gcc ggc 1680Ala Ala Ala Phe Asp Arg Ala Leu Asp Asp Gly Arg Asp Ser Ala Gly 545 550 555 560 gcg tgg gcg gcc gcc gtc gac gcc gcc gag cgc ggt gcg cag gac acc 1728Ala Trp Ala Ala Ala Val Asp Ala Ala Glu Arg Gly Ala Gln Asp Thr 565 570 575 gcg cgc atg acg ccg cgc gcg ggc cgt gcg agc tat ctc ggc gaa cgc 1776Ala Arg Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg 580 585 590 gcg atc ggc acg ccc gac ggc ggc gcc atc gcc gtc gcg tac tgg ctg 1824Ala Ile Gly Thr Pro Asp Gly Gly Ala Ile Ala Val Ala Tyr Trp Leu 595 600 605 cgc gca ctg ctg ccg cac gtc cga taa 1851Arg Ala Leu Leu Pro His Val Arg 610 615 65616PRTBurkholderia multivorans 65Met Tyr Arg Gly Thr Glu Ala Arg Thr Gly Glu Ile His Gly Thr Ala 1 5 10 15 Pro Arg His Arg Arg His Gly Ala Arg Ile Pro Ala Thr Arg Gln Pro 20 25 30 Glu Ala Pro Asp Arg Phe Gly Pro Arg Ala Phe Ile Cys Pro Glu Thr 35 40 45 Val Ala Met Lys Lys Leu Val Asn Arg Pro Ser Asp Val Val Arg Glu 50 55 60 Met Leu Glu Gly Ile Ala Arg Gln Ser Pro His Leu Ala Met Leu Gly 65 70 75 80 Asp Glu His Val Leu Val Arg Arg Pro Leu Pro Glu Pro Ser Gln Arg 85 90 95 Thr Val Ala Val Leu Ser Gly Gly Gly Ser Gly His Glu Pro Ala His 100 105 110 Gly Gly Tyr Val Gly Asp Gly Met Leu Ser Ala Ala Val Cys Gly Glu 115 120 125 Val Phe Thr Ser Pro Ser Thr Asp Ala Val Leu Ala Ala Ile Arg Ala 130 135 140 Thr Ala Gly Pro Asn Gly Ala Leu Leu Val Val Lys Asn Tyr Thr Gly 145 150 155 160 Asp Arg Leu Asn Phe Gly Leu Ala Ala Glu Leu Ala Arg Ala Glu Gly 165 170 175 Ile Pro Val Glu Thr Val Ile Val Ala Asp Asp Val Ser Leu Arg Gly 180 185 190 Arg Val Glu Arg Gly Gln Arg Arg Gly Ile Ala Gly Thr Val Leu Ile 195 200 205 His Lys Leu Ala Gly Ala Ala Ala Ala Arg Gly Leu Ser Leu Pro Arg 210 215 220 Val Ala Ala Ile Ala Arg Asp Ala Ala Ala Asp Leu Gly Thr Met Gly 225 230 235 240 Val Ala Leu Asp Gly Cys Thr Leu Pro Gly Ala Asp Gln Ser Gly Phe 245 250 255 Ser Leu Ala Asp Asp Glu Ile Glu Leu Gly Leu Gly Ile His Gly Glu 260 265 270 Lys Gly Val Glu Arg Thr Ala Pro Leu Pro Ala Asp Ala Leu Ala Asp 275 280 285 Thr Leu Leu Ser Gly Ile Val Ala Asp Leu Val Leu Asp Arg Gly Glu 290 295 300 Arg Val Ala Leu Leu Val Asn Gly Leu Gly Ala Thr Pro Asp Met Glu 305 310 315 320 Leu Ala Ile Val Leu Arg Ala Ala Tyr Glu Asn Leu Ser Arg Arg Gly 325 330 335 Ile Ala Val Glu Arg Ala Trp Ala Gly Thr Phe Leu Ser Ala Leu Asn 340 345 350 Met Pro Gly Cys Ser Ile Ser Val Leu Arg Leu Asp Asp Glu Arg Ala 355 360 365 Ala Leu Leu Asp Ala Pro Thr Gln Ala Arg Ala Trp Pro Gly Gly Gly 370 375 380 Ala Val Asn Ala Gln Ile Arg Ile Ala Ala Ala Ala Pro Gln Glu Pro 385 390 395 400 Ser Pro Pro Pro Leu Asp Ala Ala Gly Arg Val Trp Ala Glu Arg Leu 405 410 415 Arg Pro Ala Leu His Ala Val Ala His Thr Leu Ile Asp His Glu Ala 420 425 430 Thr Leu Thr Glu Leu Asp Ala Ala Ala Gly Asp Gly Asp Leu Gly Ala 435 440 445 Ser Met Arg Arg Ala Ala Asp Ala Met Leu Ala Leu Pro Glu Thr Ala 450 455 460 Tyr Ala Thr Pro Ala Gly Ala Leu Ala Ala Leu Gly Ala Ala Leu Arg 465 470 475 480 Arg Ala Ile Ala Gly Ser Ser Gly Pro Phe Tyr Ala Thr Ala Leu Leu 485 490 495 Arg Ala Ser Arg Arg Leu Ala Gly Leu Ala Gln Pro Ser Ala Arg Asp 500 505 510 Trp Ala Ala Ala Leu Arg Ser Ala Ala Asp Ala Ile Ala Glu Leu Gly 515 520 525 Gly Ala Arg Ala Gly Asp Arg Thr Met Leu Asp Ala Leu Val Pro Ala 530 535 540 Ala Ala Ala Phe Asp Arg Ala Leu Asp Asp Gly Arg Asp Ser Ala Gly 545 550 555 560 Ala Trp Ala Ala Ala Val Asp Ala Ala Glu Arg Gly Ala Gln Asp Thr 565 570 575 Ala Arg Met Thr Pro Arg Ala Gly Arg Ala Ser Tyr Leu Gly Glu Arg 580 585 590 Ala Ile Gly Thr Pro Asp Gly Gly Ala Ile Ala Val Ala Tyr Trp Leu 595 600 605 Arg Ala Leu Leu Pro His Val Arg 610 615 661920DNAEscherichia coliCDS(1)..(1920) 66atg agt ggc gct ttt aac aac gat ggt cgg ggc ata tct ccc tta att 48Met Ser Gly Ala Phe Asn Asn Asp Gly Arg Gly Ile Ser Pro Leu Ile 1 5 10 15 gca acc tcc tgg gag cga tgc aat aag ctg atg aaa cgg gag aca tgg 96Ala Thr Ser Trp Glu Arg Cys Asn Lys Leu Met Lys Arg Glu Thr Trp 20 25 30 aac gta cca cat cag gcc cag ggc gtg aca ttt gct tct att tat cgg 144Asn Val Pro His Gln Ala Gln Gly Val Thr Phe Ala Ser Ile Tyr Arg 35 40 45 cgt aag aaa gcg atg ctg acg ctc ggg cag gct gcg ctg gaa gat gcc 192Arg Lys Lys Ala Met Leu Thr Leu Gly Gln Ala Ala Leu Glu Asp Ala 50 55 60 tgg gaa tat atg gca ccg cga gag tgt gcg ctg ttt atc ctc gat gaa 240Trp Glu Tyr Met Ala Pro Arg Glu Cys Ala Leu Phe Ile Leu Asp Glu 65 70 75 80 acc gcc tgc att ctc agc cgt aat ggc gat ccg caa acc ttg cag cag 288Thr Ala Cys Ile Leu Ser Arg Asn Gly Asp Pro Gln Thr Leu Gln Gln 85 90 95 cta agt gca ctg gga ttc aat gac ggc acg tat tgc gcc gag gga att 336Leu Ser Ala Leu Gly Phe Asn Asp Gly Thr Tyr Cys Ala Glu Gly Ile 100 105 110 att ggt act tgt gcg cta tcg tta gcg gct atc tct ggt cag gcc gtg 384Ile Gly Thr Cys Ala Leu Ser Leu Ala Ala Ile Ser Gly Gln Ala Val 115 120 125 aaa acg atg gcc gat caa cat ttc aaa cag gta ctc tgg aac tgg gcc 432Lys Thr Met Ala Asp Gln His Phe Lys Gln Val Leu Trp Asn Trp Ala 130 135 140 ttt tgt gca acg ccg ttg ttt gac agc aag ggc cga ttg acg gga aca 480Phe Cys Ala Thr Pro Leu Phe Asp Ser Lys Gly Arg Leu Thr Gly Thr 145 150 155 160 ata gcg ctg gcg tgt ccg gtt gag caa act acc gca gct gat ttg ccg 528Ile Ala Leu Ala Cys Pro Val Glu Gln Thr Thr Ala Ala Asp Leu Pro 165 170 175 ttg acg ttg gca atc gcc cgc gag gtc gga aat tta ctg ctg acg gac 576Leu Thr Leu Ala Ile Ala Arg Glu Val Gly Asn Leu Leu Leu Thr Asp 180 185 190 agt ttg ctc gct gaa act aac cgt cat tta aat caa ctt aat gcc ctg 624Ser Leu Leu Ala Glu Thr Asn Arg His Leu Asn Gln Leu Asn Ala Leu 195 200 205 tta gaa agt atg gat gat ggc gtg att agc tgg gac gag cag ggt aat 672Leu Glu Ser Met Asp Asp Gly Val Ile Ser Trp Asp Glu Gln Gly Asn 210 215 220 ttg caa ttt att aat gcc cag gcg gcg cgg gtc ttg cgc ctt gac gcg 720Leu Gln Phe Ile Asn Ala Gln Ala Ala Arg Val Leu Arg Leu Asp Ala 225 230 235 240 acg gca agt cag gga cgg gca atc act gaa ctc tta acg tta ccc gcc 768Thr Ala Ser Gln Gly Arg Ala Ile Thr Glu Leu Leu Thr Leu Pro Ala 245 250 255 gta ttg caa caa gca ata aaa cag gca cat ccg ctc aaa cac gta gaa 816Val Leu Gln Gln Ala Ile Lys Gln Ala His Pro Leu Lys His Val Glu 260 265 270 gca acc ttt gaa agc cag cac cag ttt att gat gcg gtg ata acc ctt 864Ala Thr Phe Glu Ser Gln His Gln Phe Ile Asp Ala Val Ile Thr Leu 275 280 285 aaa ccg ata ata gaa acg cag gga acc agc ttt att ttg ttg ctc cat 912Lys Pro Ile Ile Glu Thr Gln Gly Thr Ser Phe Ile Leu Leu Leu His 290 295 300 cct gtg gaa cag atg cgg cag ttg atg acc agt caa tta gga aaa gtc 960Pro Val Glu Gln Met Arg Gln Leu Met Thr Ser Gln Leu Gly Lys Val 305 310 315 320 agc cat acc ttc gct cat atg cca cag gac gat ccg caa acc cgc cgc 1008Ser His Thr Phe Ala His Met Pro Gln Asp Asp Pro Gln Thr Arg Arg 325 330 335 ttg att cat ttt ggt cgc cag gcg gcg cgc agt agc ttt cct gtc ctg 1056Leu Ile His Phe Gly Arg Gln Ala Ala Arg Ser Ser Phe Pro Val Leu 340 345 350 ctt tgt gga gaa gag ggc gtg ggc aag gca ctg cta agt cag gca att 1104Leu Cys Gly Glu Glu Gly Val Gly Lys Ala Leu Leu Ser Gln Ala Ile 355 360 365 cat aat gaa agc gag cgt gct gca ggt cct tat atc gcc gtc aat tgt 1152His Asn Glu Ser Glu Arg Ala Ala Gly Pro Tyr Ile Ala Val Asn Cys 370 375 380 gag tta tat ggt gat gct gcg ctg gcg gaa gaa ttt att ggt ggc gat 1200Glu Leu Tyr Gly Asp Ala Ala Leu Ala Glu Glu Phe Ile Gly Gly Asp 385 390 395 400 cgc acg gac aat gaa aat ggc cgt ctg agt cgg ctg gaa ctg gca cac 1248Arg Thr Asp Asn Glu Asn Gly Arg Leu Ser Arg Leu Glu Leu Ala His 405 410 415 ggc ggc acg ctg ttt ctt gaa aag att gaa tat ctg gcg gtg gag tta 1296Gly Gly Thr Leu Phe Leu Glu Lys Ile Glu Tyr Leu Ala Val Glu Leu 420 425 430 cag tct gct ttg ctt cag gtt atc aag cag ggg gtt atc acg cga ctg 1344Gln Ser Ala Leu Leu Gln Val Ile Lys Gln Gly Val Ile Thr Arg Leu 435 440 445 gat gcg cgg cgt tta ata cca att gat gtc aaa gtg att gca aca acg 1392Asp Ala Arg Arg Leu Ile Pro Ile Asp Val Lys Val Ile Ala Thr Thr 450 455 460 acc gcg gac ctc gca atg ctg gtg gaa caa aat cgt ttt agt cgc cag 1440Thr Ala Asp Leu Ala Met Leu Val Glu Gln Asn Arg Phe Ser Arg Gln 465 470 475 480 ctg tat tac gcg ctg cat gca ttt gaa att acc atc ccg cct ctg cgt 1488Leu Tyr Tyr Ala Leu His Ala Phe Glu Ile Thr Ile Pro Pro Leu Arg 485 490 495 atg cgg cgt ggc agc att ccg gcg ctg gtg aat aac aaa tta cgc agt 1536Met Arg Arg Gly Ser Ile Pro Ala Leu Val Asn Asn Lys Leu Arg Ser 500 505 510 ctt gaa aaa cgc ttc tct acg cgg ctg aaa att gat gac gat gcc ctc 1584Leu Glu Lys Arg Phe Ser Thr Arg Leu Lys Ile Asp Asp Asp Ala Leu 515 520 525 gct cgc ctg gtt tct tgt gca tgg cca ggc aac gat ttt gaa ctt tac 1632Ala Arg Leu Val Ser Cys Ala Trp Pro Gly Asn Asp Phe Glu Leu Tyr 530 535 540 agc gtc atc gag aat ctt gct ctg agt agt gat aac ggg cgc att cgc 1680Ser Val Ile Glu Asn Leu Ala Leu Ser Ser Asp Asn Gly Arg Ile Arg 545 550 555 560 gtc agt gat ttg ccg gaa cat ctg ttt acc gag cag gcg aca gat gat 1728Val Ser Asp Leu Pro Glu His Leu Phe Thr Glu Gln Ala Thr Asp Asp 565 570 575 gtc agc gcc acc cgc ctt tcc acc agt ctg tca ttt gcg gaa gtt gaa 1776Val Ser Ala Thr Arg Leu Ser Thr Ser Leu Ser Phe Ala Glu Val Glu 580 585 590 aaa gag gca att att aac gca gcc cag gtc aca ggc ggt cgc att cag 1824Lys Glu Ala Ile Ile Asn Ala Ala Gln Val Thr Gly Gly Arg Ile Gln 595 600 605 gaa atg tcg gct tta ctt ggg atc ggc cgc act acg ctg tgg cgg aaa 1872Glu Met Ser Ala Leu Leu Gly Ile Gly Arg Thr Thr Leu Trp Arg Lys 610 615 620 atg aag caa cat ggc att gat gca ggg cag ttt aag cgc cgg gta tga 1920Met Lys Gln His Gly Ile Asp Ala Gly Gln Phe Lys Arg Arg Val 625 630 635 67639PRTEscherichia coli 67Met Ser Gly Ala Phe Asn Asn Asp Gly Arg Gly Ile Ser Pro Leu Ile 1 5 10 15 Ala Thr Ser Trp Glu Arg Cys Asn Lys Leu Met Lys Arg Glu Thr Trp 20 25 30 Asn Val Pro His Gln Ala Gln Gly Val Thr Phe Ala Ser Ile Tyr Arg 35 40 45 Arg Lys Lys Ala Met Leu Thr Leu Gly Gln Ala Ala Leu Glu Asp Ala 50 55 60 Trp Glu Tyr Met Ala Pro Arg Glu Cys Ala Leu Phe Ile Leu Asp Glu 65 70 75 80 Thr Ala Cys Ile Leu Ser Arg Asn Gly Asp Pro Gln Thr Leu Gln Gln 85 90 95 Leu Ser Ala Leu Gly Phe Asn Asp Gly Thr Tyr Cys Ala Glu Gly Ile 100 105 110 Ile Gly Thr Cys Ala Leu Ser Leu Ala Ala Ile Ser Gly Gln Ala Val 115 120 125 Lys Thr Met Ala Asp Gln His Phe Lys Gln Val Leu Trp Asn Trp Ala 130 135 140 Phe Cys Ala Thr Pro Leu Phe Asp Ser Lys Gly Arg Leu Thr Gly Thr 145 150 155 160 Ile Ala Leu Ala Cys Pro Val Glu Gln Thr Thr Ala Ala Asp Leu Pro 165 170 175 Leu Thr Leu Ala Ile Ala Arg Glu Val Gly Asn Leu Leu Leu Thr Asp 180 185 190 Ser Leu Leu Ala Glu Thr Asn Arg His Leu Asn Gln Leu Asn Ala Leu 195 200 205 Leu Glu Ser Met Asp Asp Gly Val Ile Ser Trp Asp Glu Gln Gly Asn 210 215 220 Leu Gln Phe Ile Asn Ala Gln Ala Ala Arg Val Leu Arg Leu Asp Ala 225 230 235 240 Thr Ala Ser Gln Gly Arg Ala Ile Thr Glu Leu Leu Thr Leu Pro Ala 245 250 255 Val Leu Gln Gln Ala Ile Lys Gln Ala His Pro Leu Lys His Val Glu 260 265 270 Ala Thr Phe Glu Ser Gln His Gln Phe Ile Asp Ala Val Ile Thr Leu 275 280 285 Lys Pro Ile Ile Glu Thr Gln Gly Thr Ser Phe Ile Leu Leu Leu His 290 295 300 Pro Val Glu Gln Met Arg Gln Leu Met Thr Ser Gln Leu Gly Lys Val 305 310 315 320 Ser His Thr Phe Ala His Met Pro Gln Asp Asp Pro Gln Thr Arg Arg 325 330 335 Leu Ile His Phe Gly Arg Gln Ala Ala Arg Ser Ser Phe Pro Val Leu 340 345 350 Leu Cys Gly Glu Glu Gly Val Gly Lys Ala Leu Leu Ser Gln Ala Ile 355 360 365 His Asn Glu Ser Glu Arg Ala Ala Gly Pro Tyr Ile Ala Val Asn Cys 370 375 380

Glu Leu Tyr Gly Asp Ala Ala Leu Ala Glu Glu Phe Ile Gly Gly Asp 385 390 395 400 Arg Thr Asp Asn Glu Asn Gly Arg Leu Ser Arg Leu Glu Leu Ala His 405 410 415 Gly Gly Thr Leu Phe Leu Glu Lys Ile Glu Tyr Leu Ala Val Glu Leu 420 425 430 Gln Ser Ala Leu Leu Gln Val Ile Lys Gln Gly Val Ile Thr Arg Leu 435 440 445 Asp Ala Arg Arg Leu Ile Pro Ile Asp Val Lys Val Ile Ala Thr Thr 450 455 460 Thr Ala Asp Leu Ala Met Leu Val Glu Gln Asn Arg Phe Ser Arg Gln 465 470 475 480 Leu Tyr Tyr Ala Leu His Ala Phe Glu Ile Thr Ile Pro Pro Leu Arg 485 490 495 Met Arg Arg Gly Ser Ile Pro Ala Leu Val Asn Asn Lys Leu Arg Ser 500 505 510 Leu Glu Lys Arg Phe Ser Thr Arg Leu Lys Ile Asp Asp Asp Ala Leu 515 520 525 Ala Arg Leu Val Ser Cys Ala Trp Pro Gly Asn Asp Phe Glu Leu Tyr 530 535 540 Ser Val Ile Glu Asn Leu Ala Leu Ser Ser Asp Asn Gly Arg Ile Arg 545 550 555 560 Val Ser Asp Leu Pro Glu His Leu Phe Thr Glu Gln Ala Thr Asp Asp 565 570 575 Val Ser Ala Thr Arg Leu Ser Thr Ser Leu Ser Phe Ala Glu Val Glu 580 585 590 Lys Glu Ala Ile Ile Asn Ala Ala Gln Val Thr Gly Gly Arg Ile Gln 595 600 605 Glu Met Ser Ala Leu Leu Gly Ile Gly Arg Thr Thr Leu Trp Arg Lys 610 615 620 Met Lys Gln His Gly Ile Asp Ala Gly Gln Phe Lys Arg Arg Val 625 630 635 68663DNAEscherichia coliCDS(1)..(663) 68atg gaa ctg tat ctg gat act tca gac gtt gtt gcg gtg aag gcg ctg 48Met Glu Leu Tyr Leu Asp Thr Ser Asp Val Val Ala Val Lys Ala Leu 1 5 10 15 tca cgt att ttt ccg ctg gcg ggt gtg acc act aac cca agc att atc 96Ser Arg Ile Phe Pro Leu Ala Gly Val Thr Thr Asn Pro Ser Ile Ile 20 25 30 gcc gcg ggt aaa aaa ccg ctg gat gtt gtg ctt ccg caa ctt cat gaa 144Ala Ala Gly Lys Lys Pro Leu Asp Val Val Leu Pro Gln Leu His Glu 35 40 45 gcg atg ggc ggt cag ggg cgt ctg ttt gcc cag gta atg gct acc act 192Ala Met Gly Gly Gln Gly Arg Leu Phe Ala Gln Val Met Ala Thr Thr 50 55 60 gcc gaa ggg atg gtt aat gac gcg ctt aag ctg cgt tct att att gcg 240Ala Glu Gly Met Val Asn Asp Ala Leu Lys Leu Arg Ser Ile Ile Ala 65 70 75 80 gat atc gtg gtg aaa gtt ccg gtg acc gcc gag ggg ctg gca gct att 288Asp Ile Val Val Lys Val Pro Val Thr Ala Glu Gly Leu Ala Ala Ile 85 90 95 aag atg tta aaa gcg gaa ggg att ccg acg ctg gga acc gcg gta tat 336Lys Met Leu Lys Ala Glu Gly Ile Pro Thr Leu Gly Thr Ala Val Tyr 100 105 110 ggc gca gca caa ggg ctg ctg tcg gcg ctg gca ggt gcg gaa tat gtt 384Gly Ala Ala Gln Gly Leu Leu Ser Ala Leu Ala Gly Ala Glu Tyr Val 115 120 125 gcg cct tac gtt aat cgt att gat gct cag ggc ggt agc ggc att cag 432Ala Pro Tyr Val Asn Arg Ile Asp Ala Gln Gly Gly Ser Gly Ile Gln 130 135 140 act gtg acc gac tta cac cag tta ttg aaa atg cat gcg ccg cag gcg 480Thr Val Thr Asp Leu His Gln Leu Leu Lys Met His Ala Pro Gln Ala 145 150 155 160 aaa gtg ctg gca gcg agt ttc aaa acc ccg cgt cag gcg ctg gac tgc 528Lys Val Leu Ala Ala Ser Phe Lys Thr Pro Arg Gln Ala Leu Asp Cys 165 170 175 tta ctg gca gga tgt gaa tca att act ctg cca ctg gat gtg gca caa 576Leu Leu Ala Gly Cys Glu Ser Ile Thr Leu Pro Leu Asp Val Ala Gln 180 185 190 cag atg att agc tat ccg gcg gtt gat gcc gct gtg gcg aag ttt gag 624Gln Met Ile Ser Tyr Pro Ala Val Asp Ala Ala Val Ala Lys Phe Glu 195 200 205 cag gac tgg cag gga gcg ttt ggc aga acg tcg att taa 663Gln Asp Trp Gln Gly Ala Phe Gly Arg Thr Ser Ile 210 215 220 69220PRTEscherichia coli 69Met Glu Leu Tyr Leu Asp Thr Ser Asp Val Val Ala Val Lys Ala Leu 1 5 10 15 Ser Arg Ile Phe Pro Leu Ala Gly Val Thr Thr Asn Pro Ser Ile Ile 20 25 30 Ala Ala Gly Lys Lys Pro Leu Asp Val Val Leu Pro Gln Leu His Glu 35 40 45 Ala Met Gly Gly Gln Gly Arg Leu Phe Ala Gln Val Met Ala Thr Thr 50 55 60 Ala Glu Gly Met Val Asn Asp Ala Leu Lys Leu Arg Ser Ile Ile Ala 65 70 75 80 Asp Ile Val Val Lys Val Pro Val Thr Ala Glu Gly Leu Ala Ala Ile 85 90 95 Lys Met Leu Lys Ala Glu Gly Ile Pro Thr Leu Gly Thr Ala Val Tyr 100 105 110 Gly Ala Ala Gln Gly Leu Leu Ser Ala Leu Ala Gly Ala Glu Tyr Val 115 120 125 Ala Pro Tyr Val Asn Arg Ile Asp Ala Gln Gly Gly Ser Gly Ile Gln 130 135 140 Thr Val Thr Asp Leu His Gln Leu Leu Lys Met His Ala Pro Gln Ala 145 150 155 160 Lys Val Leu Ala Ala Ser Phe Lys Thr Pro Arg Gln Ala Leu Asp Cys 165 170 175 Leu Leu Ala Gly Cys Glu Ser Ile Thr Leu Pro Leu Asp Val Ala Gln 180 185 190 Gln Met Ile Ser Tyr Pro Ala Val Asp Ala Ala Val Ala Lys Phe Glu 195 200 205 Gln Asp Trp Gln Gly Ala Phe Gly Arg Thr Ser Ile 210 215 220 70663DNAEscherichia coliCDS(1)..(663) 70atg gaa ctg tat ctg gac acc gct aac gtc gca gaa gtc gaa cgt ctg 48Met Glu Leu Tyr Leu Asp Thr Ala Asn Val Ala Glu Val Glu Arg Leu 1 5 10 15 gca cgc ata ttc ccc att gcc ggg gtg aca act aac ccg agc att atc 96Ala Arg Ile Phe Pro Ile Ala Gly Val Thr Thr Asn Pro Ser Ile Ile 20 25 30 gct gcc agc aag gag tcc ata tgg gaa gtg ctg ccg cgt ctg caa aaa 144Ala Ala Ser Lys Glu Ser Ile Trp Glu Val Leu Pro Arg Leu Gln Lys 35 40 45 gcg att ggt gat gag ggc att ctg ttt gct cag acc atg agc cgc gac 192Ala Ile Gly Asp Glu Gly Ile Leu Phe Ala Gln Thr Met Ser Arg Asp 50 55 60 gcg cag ggg atg gtg gaa gaa gcg aag cgc ctg cgc gac gct att ccg 240Ala Gln Gly Met Val Glu Glu Ala Lys Arg Leu Arg Asp Ala Ile Pro 65 70 75 80 ggt att gtg gtg aaa atc ccg gtg act tcc gaa ggt ctg gca gca att 288Gly Ile Val Val Lys Ile Pro Val Thr Ser Glu Gly Leu Ala Ala Ile 85 90 95 aaa ata ctg aaa aaa gag ggt att act aca ctt ggc act gct gta tat 336Lys Ile Leu Lys Lys Glu Gly Ile Thr Thr Leu Gly Thr Ala Val Tyr 100 105 110 agc gcc gca caa ggg tta tta gcc gca ctg gca ggg gca aaa tac gtt 384Ser Ala Ala Gln Gly Leu Leu Ala Ala Leu Ala Gly Ala Lys Tyr Val 115 120 125 gct ccg tat gtt aac cgc gta gat gcc cag ggc gga gac ggc att cgt 432Ala Pro Tyr Val Asn Arg Val Asp Ala Gln Gly Gly Asp Gly Ile Arg 130 135 140 acg gtt cag gag ctg caa acg ctg tta gaa atg cac gcg cca gaa agc 480Thr Val Gln Glu Leu Gln Thr Leu Leu Glu Met His Ala Pro Glu Ser 145 150 155 160 atg gtg ctg gca gcc agc ttt aaa acg ccg cgt cag gcg ctg gac tgt 528Met Val Leu Ala Ala Ser Phe Lys Thr Pro Arg Gln Ala Leu Asp Cys 165 170 175 tta ctg gca gga tgt gaa tcc atc acc ctg ccc tta gat gta gcg caa 576Leu Leu Ala Gly Cys Glu Ser Ile Thr Leu Pro Leu Asp Val Ala Gln 180 185 190 caa atg ctc aac acc cct gcg gta gag tca gct ata gag aag ttc gaa 624Gln Met Leu Asn Thr Pro Ala Val Glu Ser Ala Ile Glu Lys Phe Glu 195 200 205 cac gac tgg aat gcc gca ttt ggc act act cat ctc taa 663His Asp Trp Asn Ala Ala Phe Gly Thr Thr His Leu 210 215 220 71220PRTEscherichia coli 71Met Glu Leu Tyr Leu Asp Thr Ala Asn Val Ala Glu Val Glu Arg Leu 1 5 10 15 Ala Arg Ile Phe Pro Ile Ala Gly Val Thr Thr Asn Pro Ser Ile Ile 20 25 30 Ala Ala Ser Lys Glu Ser Ile Trp Glu Val Leu Pro Arg Leu Gln Lys 35 40 45 Ala Ile Gly Asp Glu Gly Ile Leu Phe Ala Gln Thr Met Ser Arg Asp 50 55 60 Ala Gln Gly Met Val Glu Glu Ala Lys Arg Leu Arg Asp Ala Ile Pro 65 70 75 80 Gly Ile Val Val Lys Ile Pro Val Thr Ser Glu Gly Leu Ala Ala Ile 85 90 95 Lys Ile Leu Lys Lys Glu Gly Ile Thr Thr Leu Gly Thr Ala Val Tyr 100 105 110 Ser Ala Ala Gln Gly Leu Leu Ala Ala Leu Ala Gly Ala Lys Tyr Val 115 120 125 Ala Pro Tyr Val Asn Arg Val Asp Ala Gln Gly Gly Asp Gly Ile Arg 130 135 140 Thr Val Gln Glu Leu Gln Thr Leu Leu Glu Met His Ala Pro Glu Ser 145 150 155 160 Met Val Leu Ala Ala Ser Phe Lys Thr Pro Arg Gln Ala Leu Asp Cys 165 170 175 Leu Leu Ala Gly Cys Glu Ser Ile Thr Leu Pro Leu Asp Val Ala Gln 180 185 190 Gln Met Leu Asn Thr Pro Ala Val Glu Ser Ala Ile Glu Lys Phe Glu 195 200 205 His Asp Trp Asn Ala Ala Phe Gly Thr Thr His Leu 210 215 220 721053DNAEscherichia coliCDS(1)..(1053) 72atg aca gat att gcg cag ttg ctt ggc aaa gac gcc gac aac ctt tta 48Met Thr Asp Ile Ala Gln Leu Leu Gly Lys Asp Ala Asp Asn Leu Leu 1 5 10 15 cag cac cgt tgt atg aca att cct tct gac cag ctt tat ctc ccc gga 96Gln His Arg Cys Met Thr Ile Pro Ser Asp Gln Leu Tyr Leu Pro Gly 20 25 30 cat gac tac gta gac cgc gta atg att gac aat aat cgc ccg cca gcg 144His Asp Tyr Val Asp Arg Val Met Ile Asp Asn Asn Arg Pro Pro Ala 35 40 45 gtg tta cgt aat atg cag acg ttg tac aac acc ggg cgt ctg gct ggc 192Val Leu Arg Asn Met Gln Thr Leu Tyr Asn Thr Gly Arg Leu Ala Gly 50 55 60 aca gga tat ctt tct att ctg ccg gtt gac cag ggc gtt gag cac tct 240Thr Gly Tyr Leu Ser Ile Leu Pro Val Asp Gln Gly Val Glu His Ser 65 70 75 80 gcc gga gct tca ttt gct gct aac ccg ctc tac ttt gac ccg aaa aac 288Ala Gly Ala Ser Phe Ala Ala Asn Pro Leu Tyr Phe Asp Pro Lys Asn 85 90 95 att gtt gaa ctg gcg atc gaa gcg ggc tgt aac tgt gtg gcg tca act 336Ile Val Glu Leu Ala Ile Glu Ala Gly Cys Asn Cys Val Ala Ser Thr 100 105 110 tac ggc gtg ctg gcg tcg gta tcg cgg cgt tat gcg cat cgc att cca 384Tyr Gly Val Leu Ala Ser Val Ser Arg Arg Tyr Ala His Arg Ile Pro 115 120 125 ttc ctc gtc aaa ctt aat cac aac gag acg cta agt tac ccg aat acc 432Phe Leu Val Lys Leu Asn His Asn Glu Thr Leu Ser Tyr Pro Asn Thr 130 135 140 tac gat caa acg ctg tat gcc agc gtg gag cag gcg ttc aac atg ggc 480Tyr Asp Gln Thr Leu Tyr Ala Ser Val Glu Gln Ala Phe Asn Met Gly 145 150 155 160 gcg gtt gcg gtt ggt gcg act atc tat ttt ggc tcg gaa gag tca cgt 528Ala Val Ala Val Gly Ala Thr Ile Tyr Phe Gly Ser Glu Glu Ser Arg 165 170 175 cgc cag att gaa gaa att tct gcg gct ttt gaa cgt gcg cac gag ctg 576Arg Gln Ile Glu Glu Ile Ser Ala Ala Phe Glu Arg Ala His Glu Leu 180 185 190 ggt atg gtg aca gtg ctg tgg gcc tat ttg cgt aac tcc gcc ttt aag 624Gly Met Val Thr Val Leu Trp Ala Tyr Leu Arg Asn Ser Ala Phe Lys 195 200 205 aaa gat ggc gtt gat tac cat gtt tcc gcc gac ctg acc ggt cag gca 672Lys Asp Gly Val Asp Tyr His Val Ser Ala Asp Leu Thr Gly Gln Ala 210 215 220 aac cat ctg gcg gca acc atc ggt gca gat atc gtc aaa caa aaa atg 720Asn His Leu Ala Ala Thr Ile Gly Ala Asp Ile Val Lys Gln Lys Met 225 230 235 240 gcg gaa aat aac ggc ggc tat aaa gca att aat tac ggt tac acc gac 768Ala Glu Asn Asn Gly Gly Tyr Lys Ala Ile Asn Tyr Gly Tyr Thr Asp 245 250 255 gat cgt gtt tac agc aaa ttg acc agc gaa aac ccg att gat ctg gtg 816Asp Arg Val Tyr Ser Lys Leu Thr Ser Glu Asn Pro Ile Asp Leu Val 260 265 270 cgt tat cag tta gct aac tgc tat atg ggt cgg gct ggg ttg ata aac 864Arg Tyr Gln Leu Ala Asn Cys Tyr Met Gly Arg Ala Gly Leu Ile Asn 275 280 285 tcc ggc ggt gct gcg ggc ggt gaa act gac ctc agc gat gca gtg cgt 912Ser Gly Gly Ala Ala Gly Gly Glu Thr Asp Leu Ser Asp Ala Val Arg 290 295 300 act gcg gtt atc aac aaa cgc gca ggc gga atg ggg ctg att ctt gga 960Thr Ala Val Ile Asn Lys Arg Ala Gly Gly Met Gly Leu Ile Leu Gly 305 310 315 320 cgt aaa gcg ttc aag aaa tcg atg gct gac ggc gtg aaa ctg att aac 1008Arg Lys Ala Phe Lys Lys Ser Met Ala Asp Gly Val Lys Leu Ile Asn 325 330 335 gcc gtg cag gac gtt tat ctc gat agc aaa att act atc gcc tga 1053Ala Val Gln Asp Val Tyr Leu Asp Ser Lys Ile Thr Ile Ala 340 345 350 73350PRTEscherichia coli 73Met Thr Asp Ile Ala Gln Leu Leu Gly Lys Asp Ala Asp Asn Leu Leu 1 5 10 15 Gln His Arg Cys Met Thr Ile Pro Ser Asp Gln Leu Tyr Leu Pro Gly 20 25 30 His Asp Tyr Val Asp Arg Val Met Ile Asp Asn Asn Arg Pro Pro Ala 35 40 45 Val Leu Arg Asn Met Gln Thr Leu Tyr Asn Thr Gly Arg Leu Ala Gly 50 55 60 Thr Gly Tyr Leu Ser Ile Leu Pro Val Asp Gln Gly Val Glu His Ser 65 70 75 80 Ala Gly Ala Ser Phe Ala Ala Asn Pro Leu Tyr Phe Asp Pro Lys Asn 85 90 95 Ile Val Glu Leu Ala Ile Glu Ala Gly Cys Asn Cys Val Ala Ser Thr 100 105 110 Tyr Gly Val Leu Ala Ser Val Ser Arg Arg Tyr Ala His Arg Ile Pro 115 120 125 Phe Leu Val Lys Leu Asn His Asn Glu Thr Leu Ser Tyr Pro Asn Thr 130 135 140 Tyr Asp Gln Thr Leu Tyr Ala Ser Val Glu Gln Ala Phe Asn Met Gly 145 150 155 160 Ala Val Ala Val Gly Ala Thr Ile Tyr Phe Gly Ser Glu Glu Ser Arg 165 170 175 Arg Gln Ile Glu Glu Ile Ser Ala Ala Phe Glu Arg Ala His Glu Leu 180 185 190 Gly Met Val Thr Val Leu Trp Ala Tyr Leu Arg Asn Ser Ala Phe Lys 195 200 205 Lys Asp Gly Val Asp Tyr His Val Ser Ala Asp Leu Thr Gly Gln Ala 210

215 220 Asn His Leu Ala Ala Thr Ile Gly Ala Asp Ile Val Lys Gln Lys Met 225 230 235 240 Ala Glu Asn Asn Gly Gly Tyr Lys Ala Ile Asn Tyr Gly Tyr Thr Asp 245 250 255 Asp Arg Val Tyr Ser Lys Leu Thr Ser Glu Asn Pro Ile Asp Leu Val 260 265 270 Arg Tyr Gln Leu Ala Asn Cys Tyr Met Gly Arg Ala Gly Leu Ile Asn 275 280 285 Ser Gly Gly Ala Ala Gly Gly Glu Thr Asp Leu Ser Asp Ala Val Arg 290 295 300 Thr Ala Val Ile Asn Lys Arg Ala Gly Gly Met Gly Leu Ile Leu Gly 305 310 315 320 Arg Lys Ala Phe Lys Lys Ser Met Ala Asp Gly Val Lys Leu Ile Asn 325 330 335 Ala Val Gln Asp Val Tyr Leu Asp Ser Lys Ile Thr Ile Ala 340 345 350 741143DNAShigella dysenteriaeCDS(1)..(1143) 74atg ccg cat ttg gca cta ctc atc tct aaa gga gca att atg gac cgc 48Met Pro His Leu Ala Leu Leu Ile Ser Lys Gly Ala Ile Met Asp Arg 1 5 10 15 att att caa tca ccg ggt aaa tac atc cag ggc gct gat gtg att aat 96Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asp Val Ile Asn 20 25 30 cgt ctg ggc gaa tac ctg aag ccg ctg gca gaa ctc tgg tta gtg gtg 144Arg Leu Gly Glu Tyr Leu Lys Pro Leu Ala Glu Leu Trp Leu Val Val 35 40 45 ggt gac aaa ttt gtt tta ggt ttt gct caa tcc act gtc gag aaa agc 192Gly Asp Lys Phe Val Leu Gly Phe Ala Gln Ser Thr Val Glu Lys Ser 50 55 60 ttt aaa gat gct gga ctg gta gta gaa att gcg ccg ttt ggc ggt gaa 240Phe Lys Asp Ala Gly Leu Val Val Glu Ile Ala Pro Phe Gly Gly Glu 65 70 75 80 tgt tcg caa aat gag atc gac cgt ctg cgt ggc atc gcg gag act gcg 288Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Gly Ile Ala Glu Thr Ala 85 90 95 cag tgt ggc gca att ctc ggt atc ggt ggc gga aaa act ttc gat act 336Gln Cys Gly Ala Ile Leu Gly Ile Gly Gly Gly Lys Thr Phe Asp Thr 100 105 110 gcc aaa gca ctg gca cat ttc atg ggt gtt ccg gta gcg atc gca ccg 384Ala Lys Ala Leu Ala His Phe Met Gly Val Pro Val Ala Ile Ala Pro 115 120 125 acg atc gcc tct acc gac gca ccg tgc agc gca ttg tct gtt atc tac 432Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser Val Ile Tyr 130 135 140 acc gat gag ggt gag ttt gac cgc tat ctg ctg ttg cca aat aac cct 480Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro Asn Asn Pro 145 150 155 160 aat atg gtc att gtc gac acc aaa atc gtc gct ggc gca cct gca cgt 528Asn Met Val Ile Val Asp Thr Lys Ile Val Ala Gly Ala Pro Ala Arg 165 170 175 ctg tta gcg gcg ggt atc ggc gat gcg ctg gca acc tgg ttt gaa gcg 576Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp Phe Glu Ala 180 185 190 cgt gcc tgc tct cgt agc ggc gcg acc acc atg gcg ggc ggc aag tgc 624Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly Gly Lys Cys 195 200 205 acc cag gct gcg ctg gca ctg gct gaa ctg tgc tac aac acc ctg ctg 672Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn Thr Leu Leu 210 215 220 gaa gaa ggc gaa aaa gcg atg ctt gct gcc gaa cag cat gta gtg act 720Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His Val Val Thr 225 230 235 240 ccg gcg ctg gag cgc gtg att gaa gcg aac acc tat ttg agc ggt gtt 768Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu Ser Gly Val 245 250 255 ggt ttt gaa agt ggt ggt ctg gct gcg gcg cac gca gtg cat aac ggc 816Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Val His Asn Gly 260 265 270 ctg acc gct atc ccg gac gcg cat cac tat tat cac ggt gaa aaa gtg 864Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly Glu Lys Val 275 280 285 gca ttc ggt acg ctg acg cag ctg gtt ctg gaa aat gcg ccg gtg gag 912Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala Pro Val Glu 290 295 300 gaa atc gaa acc gta gct gcc ctt agc cat gcg gta ggt ttg cca ata 960Glu Ile Glu Thr Val Ala Ala Leu Ser His Ala Val Gly Leu Pro Ile 305 310 315 320 act ctc gct caa ctg gat att aaa gaa gat gtc ccg gcg aaa atg cga 1008Thr Leu Ala Gln Leu Asp Ile Lys Glu Asp Val Pro Ala Lys Met Arg 325 330 335 att gtg gca gaa gcg gca tgt gca gaa ggt gaa acc att cac aac atg 1056Ile Val Ala Glu Ala Ala Cys Ala Glu Gly Glu Thr Ile His Asn Met 340 345 350 cct ggc ggc gcg acg cca gat cag gtt tac gcc gca ctg ctg gta gct 1104Pro Gly Gly Ala Thr Pro Asp Gln Val Tyr Ala Ala Leu Leu Val Ala 355 360 365 gac cag tat gga caa cgt ttc ctg caa gag tgg gaa taa 1143Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 370 375 380 75380PRTShigella dysenteriae 75Met Pro His Leu Ala Leu Leu Ile Ser Lys Gly Ala Ile Met Asp Arg 1 5 10 15 Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asp Val Ile Asn 20 25 30 Arg Leu Gly Glu Tyr Leu Lys Pro Leu Ala Glu Leu Trp Leu Val Val 35 40 45 Gly Asp Lys Phe Val Leu Gly Phe Ala Gln Ser Thr Val Glu Lys Ser 50 55 60 Phe Lys Asp Ala Gly Leu Val Val Glu Ile Ala Pro Phe Gly Gly Glu 65 70 75 80 Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Gly Ile Ala Glu Thr Ala 85 90 95 Gln Cys Gly Ala Ile Leu Gly Ile Gly Gly Gly Lys Thr Phe Asp Thr 100 105 110 Ala Lys Ala Leu Ala His Phe Met Gly Val Pro Val Ala Ile Ala Pro 115 120 125 Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser Val Ile Tyr 130 135 140 Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro Asn Asn Pro 145 150 155 160 Asn Met Val Ile Val Asp Thr Lys Ile Val Ala Gly Ala Pro Ala Arg 165 170 175 Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp Phe Glu Ala 180 185 190 Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly Gly Lys Cys 195 200 205 Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn Thr Leu Leu 210 215 220 Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His Val Val Thr 225 230 235 240 Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu Ser Gly Val 245 250 255 Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Val His Asn Gly 260 265 270 Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly Glu Lys Val 275 280 285 Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala Pro Val Glu 290 295 300 Glu Ile Glu Thr Val Ala Ala Leu Ser His Ala Val Gly Leu Pro Ile 305 310 315 320 Thr Leu Ala Gln Leu Asp Ile Lys Glu Asp Val Pro Ala Lys Met Arg 325 330 335 Ile Val Ala Glu Ala Ala Cys Ala Glu Gly Glu Thr Ile His Asn Met 340 345 350 Pro Gly Gly Ala Thr Pro Asp Gln Val Tyr Ala Ala Leu Leu Val Ala 355 360 365 Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 370 375 380 761104DNASalmonella typhimuriumCDS(1)..(1104) 76atg gat cgc att att cag tca cca ggt aag tat att cag ggt gca aac 48Met Asp Arg Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asn 1 5 10 15 gtc atc gcg cgt ctt ggc gat tat tta aaa cca atg gcg aac aac tgg 96Val Ile Ala Arg Leu Gly Asp Tyr Leu Lys Pro Met Ala Asn Asn Trp 20 25 30 ctg gtt gtg ggc gat aaa ttc gtg ctg gga ttt gcc gaa gag acg ctg 144Leu Val Val Gly Asp Lys Phe Val Leu Gly Phe Ala Glu Glu Thr Leu 35 40 45 cgc aaa agc ctg acg gat gcc ggt ttg tca gta gaa atc gcc ccg ttt 192Arg Lys Ser Leu Thr Asp Ala Gly Leu Ser Val Glu Ile Ala Pro Phe 50 55 60 ggc ggc gaa tgt tcg caa aat gag atc gac agg ctg cgc gcc gtc gcc 240Gly Gly Glu Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Ala Val Ala 65 70 75 80 gaa aaa agt cag tgt ggc gcc gta ctg ggt atc ggc ggc ggt aaa acg 288Glu Lys Ser Gln Cys Gly Ala Val Leu Gly Ile Gly Gly Gly Lys Thr 85 90 95 ctg gat acc gcc aaa gcg ctg gcg cac ttt atg aac gtc ccg gtc gct 336Leu Asp Thr Ala Lys Ala Leu Ala His Phe Met Asn Val Pro Val Ala 100 105 110 atc gcg ccg acc atc gcc tct acc gac gca ccg tgc agc gca ctc tcg 384Ile Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 gtt att tat acc gat gcc ggt gag ttt gac cgt tat ctg ctg ctg ccg 432Val Ile Tyr Thr Asp Ala Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro 130 135 140 cat aac ccg aat atg gtt att gtc gat acg cag ata gtg gcg ggc gcg 480His Asn Pro Asn Met Val Ile Val Asp Thr Gln Ile Val Ala Gly Ala 145 150 155 160 ccg gcg cgt ctg ctg gca gcc ggt atc ggc gat gca ctg gcg acc tgg 528Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 ttt gaa gcg cgc gcc tgc tca cgc agc ggc gcc acc aca atg gcg ggc 576Phe Glu Ala Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly 180 185 190 ggc aag tgt aca cag gcc gcg ctg gcg ctg gcg gag cta tgc tat aac 624Gly Lys Cys Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn 195 200 205 acg ctg atc gaa gaa ggc gaa aaa gcc atg ttg gcc gcc gaa cag cac 672Thr Leu Ile Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His 210 215 220 gtc gtc acg cca gcg ctg gaa cgc gtc atc gaa gcc aac acc tac ctg 720Val Val Thr Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 agc ggg gtc ggt ttt gaa agc ggc ggt ctg gcc gca gcg cac gcg att 768Ser Gly Val Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Ile 245 250 255 cat aac ggt tta acg gcg att ccg gat gcg cac cac tat tat cac ggt 816His Asn Gly Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly 260 265 270 gag aag gtc gct ttc ggt acg ctg acg caa ctg gtg ctg gaa aac gcg 864Glu Lys Val Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala 275 280 285 ccg gtc gaa gaa atc gaa acc gtt gcg gcg ctg tgc cat tcc gtt ggc 912Pro Val Glu Glu Ile Glu Thr Val Ala Ala Leu Cys His Ser Val Gly 290 295 300 ctg ccg att acg ctg gcg caa ctg gat att aaa cag gat att ccg gcc 960Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Lys Gln Asp Ile Pro Ala 305 310 315 320 aag atg cgc acc gtc gcg gaa gcc tcc tgc gca gaa ggt gaa act att 1008Lys Met Arg Thr Val Ala Glu Ala Ser Cys Ala Glu Gly Glu Thr Ile 325 330 335 cat aac atg cct ggc ggc gca acg ccg gat gaa gtg tac gcc gcg ctg 1056His Asn Met Pro Gly Gly Ala Thr Pro Asp Glu Val Tyr Ala Ala Leu 340 345 350 ctg gtc gcc gac cag tac ggt caa cgc ttc ttg cag gaa tgg gaa taa 1104Leu Val Ala Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 355 360 365 77367PRTSalmonella typhimurium 77Met Asp Arg Ile Ile Gln Ser Pro Gly Lys Tyr Ile Gln Gly Ala Asn 1 5 10 15 Val Ile Ala Arg Leu Gly Asp Tyr Leu Lys Pro Met Ala Asn Asn Trp 20 25 30 Leu Val Val Gly Asp Lys Phe Val Leu Gly Phe Ala Glu Glu Thr Leu 35 40 45 Arg Lys Ser Leu Thr Asp Ala Gly Leu Ser Val Glu Ile Ala Pro Phe 50 55 60 Gly Gly Glu Cys Ser Gln Asn Glu Ile Asp Arg Leu Arg Ala Val Ala 65 70 75 80 Glu Lys Ser Gln Cys Gly Ala Val Leu Gly Ile Gly Gly Gly Lys Thr 85 90 95 Leu Asp Thr Ala Lys Ala Leu Ala His Phe Met Asn Val Pro Val Ala 100 105 110 Ile Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 Val Ile Tyr Thr Asp Ala Gly Glu Phe Asp Arg Tyr Leu Leu Leu Pro 130 135 140 His Asn Pro Asn Met Val Ile Val Asp Thr Gln Ile Val Ala Gly Ala 145 150 155 160 Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 Phe Glu Ala Arg Ala Cys Ser Arg Ser Gly Ala Thr Thr Met Ala Gly 180 185 190 Gly Lys Cys Thr Gln Ala Ala Leu Ala Leu Ala Glu Leu Cys Tyr Asn 195 200 205 Thr Leu Ile Glu Glu Gly Glu Lys Ala Met Leu Ala Ala Glu Gln His 210 215 220 Val Val Thr Pro Ala Leu Glu Arg Val Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 Ser Gly Val Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Ile 245 250 255 His Asn Gly Leu Thr Ala Ile Pro Asp Ala His His Tyr Tyr His Gly 260 265 270 Glu Lys Val Ala Phe Gly Thr Leu Thr Gln Leu Val Leu Glu Asn Ala 275 280 285 Pro Val Glu Glu Ile Glu Thr Val Ala Ala Leu Cys His Ser Val Gly 290 295 300 Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Lys Gln Asp Ile Pro Ala 305 310 315 320 Lys Met Arg Thr Val Ala Glu Ala Ser Cys Ala Glu Gly Glu Thr Ile 325 330 335 His Asn Met Pro Gly Gly Ala Thr Pro Asp Glu Val Tyr Ala Ala Leu 340 345 350 Leu Val Ala Asp Gln Tyr Gly Gln Arg Phe Leu Gln Glu Trp Glu 355 360 365 781098DNAPseudomonas putidaCDS(1)..(1098) 78atg gac cgc gcc att caa tca ccc ggc aaa tat gta caa ggg gcc gat 48Met Asp Arg Ala Ile Gln Ser Pro Gly Lys Tyr Val Gln Gly Ala Asp 1 5 10 15 gcg ctg caa cgg ctg ggg gac tac ctc aag ccg ctg gcg gac agc tgg 96Ala Leu Gln Arg Leu Gly Asp Tyr Leu Lys Pro Leu Ala Asp Ser Trp 20 25 30 ctg gtg att gcc gac aag ttc gtg ctg ggc ttt gcc gaa gac acc atc 144Leu Val Ile Ala Asp Lys Phe Val Leu Gly Phe Ala Glu Asp Thr Ile 35 40 45 cgc caa agc ctc agc aag gcc ggg ctg gcc atg gac atc gtc gcc ttc 192Arg Gln Ser Leu Ser Lys Ala Gly Leu Ala Met Asp Ile Val Ala Phe 50 55 60

aac ggc gaa tgc tcg cag ggc gag gtc gat cgc ctg tgc caa ctg gcc 240Asn Gly Glu Cys Ser Gln Gly Glu Val Asp Arg Leu Cys Gln Leu Ala 65 70 75 80 acg caa aac ggg cgc agc gcc atc gtc ggc att ggt ggc ggc aag acg 288Thr Gln Asn Gly Arg Ser Ala Ile Val Gly Ile Gly Gly Gly Lys Thr 85 90 95 ctg gac acc gcc aag gcc gtg gcc ttt ttc cag aaa gtg ccc gtg gcc 336Leu Asp Thr Ala Lys Ala Val Ala Phe Phe Gln Lys Val Pro Val Ala 100 105 110 gtg gcc ccc acc atc gcc tcc acc gac gcg ccc tgc agc gcg ctg tcg 384Val Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 gtg ctc tat acc gat gaa ggt gag ttc gac cgc tat ctg atg ctg ccc 432Val Leu Tyr Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Met Leu Pro 130 135 140 acc aac ccc gcc ctg gtg gtg gtg gac acc gcc atc gtc gcc cgt gca 480Thr Asn Pro Ala Leu Val Val Val Asp Thr Ala Ile Val Ala Arg Ala 145 150 155 160 ccg gcg cgg ctg ttg gcg gcc ggc att ggt gat gcc ctg gcc acc tgg 528Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 ttc gag gcg cgt gcc gca tcg cgc agc agc gct gcc acc atg gcc ggc 576Phe Glu Ala Arg Ala Ala Ser Arg Ser Ser Ala Ala Thr Met Ala Gly 180 185 190 ggc ccg gcc acg cag acc gca ctg aac ctg gcc agg ttc tgc tac gac 624Gly Pro Ala Thr Gln Thr Ala Leu Asn Leu Ala Arg Phe Cys Tyr Asp 195 200 205 acc ctg ctg gaa gag ggt gaa aaa gcc atg ttg gcc gtg cag gcc cag 672Thr Leu Leu Glu Glu Gly Glu Lys Ala Met Leu Ala Val Gln Ala Gln 210 215 220 gtg gtg acg ccg gcg ctg gag cgc atc gtc gag gcc aac acc tat ctg 720Val Val Thr Pro Ala Leu Glu Arg Ile Val Glu Ala Asn Thr Tyr Leu 225 230 235 240 agc ggg gtc ggg ttt gaa agc ggt ggc gtg gcc gcc gcc cac gcg gtg 768Ser Gly Val Gly Phe Glu Ser Gly Gly Val Ala Ala Ala His Ala Val 245 250 255 cac aac ggc ctg acc gcc gtg gcc gaa acc cac cac ttc tac cac ggc 816His Asn Gly Leu Thr Ala Val Ala Glu Thr His His Phe Tyr His Gly 260 265 270 gaa aaa gtg gcg ttt ggc gtg ctg gtg caa ctg gcg ctg gaa aac gcc 864Glu Lys Val Ala Phe Gly Val Leu Val Gln Leu Ala Leu Glu Asn Ala 275 280 285 tcc aac gcg gaa atg cag gaa gtg atg tcg ctg tgc cac gcc gtg ggc 912Ser Asn Ala Glu Met Gln Glu Val Met Ser Leu Cys His Ala Val Gly 290 295 300 ctg ccc atc acg ctg gcg cag ctg gac att acc gaa gac atc ccc acc 960Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Thr Glu Asp Ile Pro Thr 305 310 315 320 aag atg cgc gcc gtg gcc gag ctg gcc tgc gcc cca ggc gag acc atc 1008Lys Met Arg Ala Val Ala Glu Leu Ala Cys Ala Pro Gly Glu Thr Ile 325 330 335 cac aac atg ccc ggc ggc gtg acg gtg gag cag gtc tat ggc gcg ctg 1056His Asn Met Pro Gly Gly Val Thr Val Glu Gln Val Tyr Gly Ala Leu 340 345 350 ctg gtg gcg gac cag ctg ggg cag cat ttt ctg gag ttt tga 1098Leu Val Ala Asp Gln Leu Gly Gln His Phe Leu Glu Phe 355 360 365 79365PRTPseudomonas putida 79Met Asp Arg Ala Ile Gln Ser Pro Gly Lys Tyr Val Gln Gly Ala Asp 1 5 10 15 Ala Leu Gln Arg Leu Gly Asp Tyr Leu Lys Pro Leu Ala Asp Ser Trp 20 25 30 Leu Val Ile Ala Asp Lys Phe Val Leu Gly Phe Ala Glu Asp Thr Ile 35 40 45 Arg Gln Ser Leu Ser Lys Ala Gly Leu Ala Met Asp Ile Val Ala Phe 50 55 60 Asn Gly Glu Cys Ser Gln Gly Glu Val Asp Arg Leu Cys Gln Leu Ala 65 70 75 80 Thr Gln Asn Gly Arg Ser Ala Ile Val Gly Ile Gly Gly Gly Lys Thr 85 90 95 Leu Asp Thr Ala Lys Ala Val Ala Phe Phe Gln Lys Val Pro Val Ala 100 105 110 Val Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Cys Ser Ala Leu Ser 115 120 125 Val Leu Tyr Thr Asp Glu Gly Glu Phe Asp Arg Tyr Leu Met Leu Pro 130 135 140 Thr Asn Pro Ala Leu Val Val Val Asp Thr Ala Ile Val Ala Arg Ala 145 150 155 160 Pro Ala Arg Leu Leu Ala Ala Gly Ile Gly Asp Ala Leu Ala Thr Trp 165 170 175 Phe Glu Ala Arg Ala Ala Ser Arg Ser Ser Ala Ala Thr Met Ala Gly 180 185 190 Gly Pro Ala Thr Gln Thr Ala Leu Asn Leu Ala Arg Phe Cys Tyr Asp 195 200 205 Thr Leu Leu Glu Glu Gly Glu Lys Ala Met Leu Ala Val Gln Ala Gln 210 215 220 Val Val Thr Pro Ala Leu Glu Arg Ile Val Glu Ala Asn Thr Tyr Leu 225 230 235 240 Ser Gly Val Gly Phe Glu Ser Gly Gly Val Ala Ala Ala His Ala Val 245 250 255 His Asn Gly Leu Thr Ala Val Ala Glu Thr His His Phe Tyr His Gly 260 265 270 Glu Lys Val Ala Phe Gly Val Leu Val Gln Leu Ala Leu Glu Asn Ala 275 280 285 Ser Asn Ala Glu Met Gln Glu Val Met Ser Leu Cys His Ala Val Gly 290 295 300 Leu Pro Ile Thr Leu Ala Gln Leu Asp Ile Thr Glu Asp Ile Pro Thr 305 310 315 320 Lys Met Arg Ala Val Ala Glu Leu Ala Cys Ala Pro Gly Glu Thr Ile 325 330 335 His Asn Met Pro Gly Gly Val Thr Val Glu Gln Val Tyr Gly Ala Leu 340 345 350 Leu Val Ala Asp Gln Leu Gly Gln His Phe Leu Glu Phe 355 360 365 801104DNABacillus coagulansCDS(1)..(1104) 80atg acg aaa atc att acc tct cca agc aag ttt ata caa ggc ccc gat 48Met Thr Lys Ile Ile Thr Ser Pro Ser Lys Phe Ile Gln Gly Pro Asp 1 5 10 15 gaa ttg tcc agg ctt tcg gcg tat acg gaa agg ctt ggc aaa aaa gca 96Glu Leu Ser Arg Leu Ser Ala Tyr Thr Glu Arg Leu Gly Lys Lys Ala 20 25 30 ttt att att gcg gat gat ttt gtc acc ggc ctt gtc ggc aaa acg gtt 144Phe Ile Ile Ala Asp Asp Phe Val Thr Gly Leu Val Gly Lys Thr Val 35 40 45 gaa gaa agc tat gcc ggc aaa gaa acg ggg tat caa atg gca tta ttc 192Glu Glu Ser Tyr Ala Gly Lys Glu Thr Gly Tyr Gln Met Ala Leu Phe 50 55 60 ggt ggt gag tgt tct aaa ccg gaa atc gaa cgg ctt tgt gaa atg agc 240Gly Gly Glu Cys Ser Lys Pro Glu Ile Glu Arg Leu Cys Glu Met Ser 65 70 75 80 aaa tcc gag gaa gcc gat gtc gtt gtc gga atc ggc ggc gga aaa aca 288Lys Ser Glu Glu Ala Asp Val Val Val Gly Ile Gly Gly Gly Lys Thr 85 90 95 ttg gat acc gca aaa gca gtc ggg tat tac aat aac att ccg gtg att 336Leu Asp Thr Ala Lys Ala Val Gly Tyr Tyr Asn Asn Ile Pro Val Ile 100 105 110 gtc gcg ccg acc atc gct tcc acc gat gcc ccg aca agc gcc ctg tct 384Val Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Thr Ser Ala Leu Ser 115 120 125 gtt att tac aaa gag aac ggc gag ttt gaa gaa tac ttg atg ctg ccg 432Val Ile Tyr Lys Glu Asn Gly Glu Phe Glu Glu Tyr Leu Met Leu Pro 130 135 140 ctg aac ccg act ttt gtc att atg gat acg aaa gtg att gcc tct gcc 480Leu Asn Pro Thr Phe Val Ile Met Asp Thr Lys Val Ile Ala Ser Ala 145 150 155 160 cct gcc cgc ctg ctc gtt tcc ggc atg gga gat gcg ctt gca acg tat 528Pro Ala Arg Leu Leu Val Ser Gly Met Gly Asp Ala Leu Ala Thr Tyr 165 170 175 ttt gaa gcg cgc gcc act aag cgg gca aat aaa acg acg atg gca ggc 576Phe Glu Ala Arg Ala Thr Lys Arg Ala Asn Lys Thr Thr Met Ala Gly 180 185 190 ggg cgt gtt acg gaa gcg gcg atc gcg ctt gca aaa ctt tgt tat gac 624Gly Arg Val Thr Glu Ala Ala Ile Ala Leu Ala Lys Leu Cys Tyr Asp 195 200 205 acg caa att tcg gaa ggt tta aaa gca aaa ctg gca gcg gaa aaa cat 672Thr Gln Ile Ser Glu Gly Leu Lys Ala Lys Leu Ala Ala Glu Lys His 210 215 220 ctt gtt acg gaa gca gtg gaa aaa atc att gaa gcg aat acg tat ctg 720Leu Val Thr Glu Ala Val Glu Lys Ile Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 agc gga atc ggt ttt gaa agc ggc ggc ctt gct gcg gca cat gcg atc 768Ser Gly Ile Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Ile 245 250 255 cat aat ggg ctt acc gtg ctc gaa gaa acc cat cat atg tac cac ggc 816His Asn Gly Leu Thr Val Leu Glu Glu Thr His His Met Tyr His Gly 260 265 270 gaa aaa gtg gca ttc ggt acc ctc gcc cag ctg att ttg gaa gat gcg 864Glu Lys Val Ala Phe Gly Thr Leu Ala Gln Leu Ile Leu Glu Asp Ala 275 280 285 ccg aaa gcg gaa att gaa gag gtg gtc tcc ttc tgc ctg agt gtc gga 912Pro Lys Ala Glu Ile Glu Glu Val Val Ser Phe Cys Leu Ser Val Gly 290 295 300 ctt ccc gtc acg ctc ggg gat ttg ggc gtg aaa gaa ctg aat gag gaa 960Leu Pro Val Thr Leu Gly Asp Leu Gly Val Lys Glu Leu Asn Glu Glu 305 310 315 320 aag ctc cga aaa gtg gct gaa ctt tcc tgt gcg gaa ggc gaa acg att 1008Lys Leu Arg Lys Val Ala Glu Leu Ser Cys Ala Glu Gly Glu Thr Ile 325 330 335 tat aac atg ccg ttt gaa gtc acg cct gac ctt gtg tac gca gca atc 1056Tyr Asn Met Pro Phe Glu Val Thr Pro Asp Leu Val Tyr Ala Ala Ile 340 345 350 gtt acc gct gat tcc gtc ggg cgg tat tat aag gaa aaa tgg gca tga 1104Val Thr Ala Asp Ser Val Gly Arg Tyr Tyr Lys Glu Lys Trp Ala 355 360 365 81367PRTBacillus coagulans 81Met Thr Lys Ile Ile Thr Ser Pro Ser Lys Phe Ile Gln Gly Pro Asp 1 5 10 15 Glu Leu Ser Arg Leu Ser Ala Tyr Thr Glu Arg Leu Gly Lys Lys Ala 20 25 30 Phe Ile Ile Ala Asp Asp Phe Val Thr Gly Leu Val Gly Lys Thr Val 35 40 45 Glu Glu Ser Tyr Ala Gly Lys Glu Thr Gly Tyr Gln Met Ala Leu Phe 50 55 60 Gly Gly Glu Cys Ser Lys Pro Glu Ile Glu Arg Leu Cys Glu Met Ser 65 70 75 80 Lys Ser Glu Glu Ala Asp Val Val Val Gly Ile Gly Gly Gly Lys Thr 85 90 95 Leu Asp Thr Ala Lys Ala Val Gly Tyr Tyr Asn Asn Ile Pro Val Ile 100 105 110 Val Ala Pro Thr Ile Ala Ser Thr Asp Ala Pro Thr Ser Ala Leu Ser 115 120 125 Val Ile Tyr Lys Glu Asn Gly Glu Phe Glu Glu Tyr Leu Met Leu Pro 130 135 140 Leu Asn Pro Thr Phe Val Ile Met Asp Thr Lys Val Ile Ala Ser Ala 145 150 155 160 Pro Ala Arg Leu Leu Val Ser Gly Met Gly Asp Ala Leu Ala Thr Tyr 165 170 175 Phe Glu Ala Arg Ala Thr Lys Arg Ala Asn Lys Thr Thr Met Ala Gly 180 185 190 Gly Arg Val Thr Glu Ala Ala Ile Ala Leu Ala Lys Leu Cys Tyr Asp 195 200 205 Thr Gln Ile Ser Glu Gly Leu Lys Ala Lys Leu Ala Ala Glu Lys His 210 215 220 Leu Val Thr Glu Ala Val Glu Lys Ile Ile Glu Ala Asn Thr Tyr Leu 225 230 235 240 Ser Gly Ile Gly Phe Glu Ser Gly Gly Leu Ala Ala Ala His Ala Ile 245 250 255 His Asn Gly Leu Thr Val Leu Glu Glu Thr His His Met Tyr His Gly 260 265 270 Glu Lys Val Ala Phe Gly Thr Leu Ala Gln Leu Ile Leu Glu Asp Ala 275 280 285 Pro Lys Ala Glu Ile Glu Glu Val Val Ser Phe Cys Leu Ser Val Gly 290 295 300 Leu Pro Val Thr Leu Gly Asp Leu Gly Val Lys Glu Leu Asn Glu Glu 305 310 315 320 Lys Leu Arg Lys Val Ala Glu Leu Ser Cys Ala Glu Gly Glu Thr Ile 325 330 335 Tyr Asn Met Pro Phe Glu Val Thr Pro Asp Leu Val Tyr Ala Ala Ile 340 345 350 Val Thr Ala Asp Ser Val Gly Arg Tyr Tyr Lys Glu Lys Trp Ala 355 360 365 82999DNAEscherichia coliCDS(1)..(999) 82atg aaa acg tta ggt gaa ttt att gtc gaa aag cag cac gag ttt tct 48Met Lys Thr Leu Gly Glu Phe Ile Val Glu Lys Gln His Glu Phe Ser 1 5 10 15 cat gct acc ggt gag ctc act gct ttg ctg tcg gca ata aaa ctg ggc 96His Ala Thr Gly Glu Leu Thr Ala Leu Leu Ser Ala Ile Lys Leu Gly 20 25 30 gcc aag att atc cat cgc gat atc aac aaa gca gga ctg gtt gat atc 144Ala Lys Ile Ile His Arg Asp Ile Asn Lys Ala Gly Leu Val Asp Ile 35 40 45 ctg ggt gcc agc ggt gct gag aac gtg cag ggc gag gtt cag cag aaa 192Leu Gly Ala Ser Gly Ala Glu Asn Val Gln Gly Glu Val Gln Gln Lys 50 55 60 ctc gac ttg ttc gct aat gaa aaa ctg aaa gcc gca ctg aaa gca cgc 240Leu Asp Leu Phe Ala Asn Glu Lys Leu Lys Ala Ala Leu Lys Ala Arg 65 70 75 80 gat atc gtt gcg ggc att gcc tct gaa gaa gaa gat gag att gtc gtc 288Asp Ile Val Ala Gly Ile Ala Ser Glu Glu Glu Asp Glu Ile Val Val 85 90 95 ttt gaa ggc tgt gaa cac gca aaa tac gtg gtg ctg atg gac ccc ctg 336Phe Glu Gly Cys Glu His Ala Lys Tyr Val Val Leu Met Asp Pro Leu 100 105 110 gat ggc tcg tcc aac atc gat gtt aac gtc tct gtc ggt acc att ttc 384Asp Gly Ser Ser Asn Ile Asp Val Asn Val Ser Val Gly Thr Ile Phe 115 120 125 tcc atc tac cgc cgc gtt acg cct gtt ggc acg ccg gta acg gaa gaa 432Ser Ile Tyr Arg Arg Val Thr Pro Val Gly Thr Pro Val Thr Glu Glu 130 135 140 gat ttc ctc cag cct ggt aac aaa cag gtt gcg gca ggt tac gtg gta 480Asp Phe Leu Gln Pro Gly Asn Lys Gln Val Ala Ala Gly Tyr Val Val 145 150 155 160 tac ggc tcc tct acc atg ctg gtt tac acc acc gga tgc ggt gtt cac 528Tyr Gly Ser Ser Thr Met Leu Val Tyr Thr Thr Gly Cys Gly Val His 165 170 175 gcc ttt act tac gat cct tcg ctc ggc gtt ttc tgc ctg tgc cag gaa 576Ala Phe Thr Tyr Asp Pro Ser Leu Gly Val Phe Cys Leu Cys Gln Glu 180 185 190 cgg atg cgc ttc ccg gag aaa ggc aaa acc tac tcc atc aac gaa gga 624Arg Met Arg Phe Pro Glu Lys Gly Lys Thr Tyr Ser Ile Asn Glu Gly 195 200 205 aac tac att aag ttt ccg aac ggg gtg aag aag tac att aaa ttc tgc 672Asn Tyr Ile Lys Phe Pro Asn Gly Val Lys Lys Tyr Ile Lys Phe Cys 210 215 220 cag gaa gaa gat aaa tcc acc aac cgc cct tat acc tca cgt tat atc 720Gln Glu Glu Asp Lys Ser Thr Asn Arg Pro Tyr Thr Ser Arg Tyr Ile 225 230 235

240 ggt tca ctg gtc gcg gat ttc cac cgt aac ctg ctg aaa ggc ggt att 768Gly Ser Leu Val Ala Asp Phe His Arg Asn Leu Leu Lys Gly Gly Ile 245 250 255 tat ctc tac cca agc acc gcc agc cac ccg gac ggc aaa ctg cgt ttg 816Tyr Leu Tyr Pro Ser Thr Ala Ser His Pro Asp Gly Lys Leu Arg Leu 260 265 270 ctg tat gag tgc aac ccg atg gca ttc ctg gcg gaa caa gcg ggc ggt 864Leu Tyr Glu Cys Asn Pro Met Ala Phe Leu Ala Glu Gln Ala Gly Gly 275 280 285 aaa gcg agc gat ggc aaa gag cgt att ctg gat atc atc ccg gaa acc 912Lys Ala Ser Asp Gly Lys Glu Arg Ile Leu Asp Ile Ile Pro Glu Thr 290 295 300 ctg cac cag cgc cgt tca ttc ttt gtc ggc aac gac cat atg gtt gaa 960Leu His Gln Arg Arg Ser Phe Phe Val Gly Asn Asp His Met Val Glu 305 310 315 320 gat gtc gaa cgc ttt atc cgt gag ttc ccg gac gcg taa 999Asp Val Glu Arg Phe Ile Arg Glu Phe Pro Asp Ala 325 330 83332PRTEscherichia coli 83Met Lys Thr Leu Gly Glu Phe Ile Val Glu Lys Gln His Glu Phe Ser 1 5 10 15 His Ala Thr Gly Glu Leu Thr Ala Leu Leu Ser Ala Ile Lys Leu Gly 20 25 30 Ala Lys Ile Ile His Arg Asp Ile Asn Lys Ala Gly Leu Val Asp Ile 35 40 45 Leu Gly Ala Ser Gly Ala Glu Asn Val Gln Gly Glu Val Gln Gln Lys 50 55 60 Leu Asp Leu Phe Ala Asn Glu Lys Leu Lys Ala Ala Leu Lys Ala Arg 65 70 75 80 Asp Ile Val Ala Gly Ile Ala Ser Glu Glu Glu Asp Glu Ile Val Val 85 90 95 Phe Glu Gly Cys Glu His Ala Lys Tyr Val Val Leu Met Asp Pro Leu 100 105 110 Asp Gly Ser Ser Asn Ile Asp Val Asn Val Ser Val Gly Thr Ile Phe 115 120 125 Ser Ile Tyr Arg Arg Val Thr Pro Val Gly Thr Pro Val Thr Glu Glu 130 135 140 Asp Phe Leu Gln Pro Gly Asn Lys Gln Val Ala Ala Gly Tyr Val Val 145 150 155 160 Tyr Gly Ser Ser Thr Met Leu Val Tyr Thr Thr Gly Cys Gly Val His 165 170 175 Ala Phe Thr Tyr Asp Pro Ser Leu Gly Val Phe Cys Leu Cys Gln Glu 180 185 190 Arg Met Arg Phe Pro Glu Lys Gly Lys Thr Tyr Ser Ile Asn Glu Gly 195 200 205 Asn Tyr Ile Lys Phe Pro Asn Gly Val Lys Lys Tyr Ile Lys Phe Cys 210 215 220 Gln Glu Glu Asp Lys Ser Thr Asn Arg Pro Tyr Thr Ser Arg Tyr Ile 225 230 235 240 Gly Ser Leu Val Ala Asp Phe His Arg Asn Leu Leu Lys Gly Gly Ile 245 250 255 Tyr Leu Tyr Pro Ser Thr Ala Ser His Pro Asp Gly Lys Leu Arg Leu 260 265 270 Leu Tyr Glu Cys Asn Pro Met Ala Phe Leu Ala Glu Gln Ala Gly Gly 275 280 285 Lys Ala Ser Asp Gly Lys Glu Arg Ile Leu Asp Ile Ile Pro Glu Thr 290 295 300 Leu His Gln Arg Arg Ser Phe Phe Val Gly Asn Asp His Met Val Glu 305 310 315 320 Asp Val Glu Arg Phe Ile Arg Glu Phe Pro Asp Ala 325 330 84819DNAEscherichia coliCDS(1)..(819) 84atg acc aca cgc gtg att gct ctc gac tta gac ggc acc tta ttg acc 48Met Thr Thr Arg Val Ile Ala Leu Asp Leu Asp Gly Thr Leu Leu Thr 1 5 10 15 ccg aaa aag acc ctg ctt cct tca tcg ata gaa gcc ctg gcc cgc gct 96Pro Lys Lys Thr Leu Leu Pro Ser Ser Ile Glu Ala Leu Ala Arg Ala 20 25 30 cgc gaa gca ggc tat caa tta atc atc gtc aca ggt cgc cat cac gtc 144Arg Glu Ala Gly Tyr Gln Leu Ile Ile Val Thr Gly Arg His His Val 35 40 45 gct att cat cct ttt tat cag gcg ctg gcg ctg gat aca cct gct att 192Ala Ile His Pro Phe Tyr Gln Ala Leu Ala Leu Asp Thr Pro Ala Ile 50 55 60 tgc tgt aat ggc acc tat ttg tat gat tat cat gca aaa acc gtg ctg 240Cys Cys Asn Gly Thr Tyr Leu Tyr Asp Tyr His Ala Lys Thr Val Leu 65 70 75 80 gaa gcg gac cca atg ccc gtt att aaa gcc ctg caa ctc att gag atg 288Glu Ala Asp Pro Met Pro Val Ile Lys Ala Leu Gln Leu Ile Glu Met 85 90 95 ctg aat gaa cac cac att cac ggt ctg atg tat gtc gat gat gca atg 336Leu Asn Glu His His Ile His Gly Leu Met Tyr Val Asp Asp Ala Met 100 105 110 gtc tat gag cac ccg acc ggg cat gtc att cgc aca tct aac tgg gcg 384Val Tyr Glu His Pro Thr Gly His Val Ile Arg Thr Ser Asn Trp Ala 115 120 125 caa acc ctg ccg ccg gaa cag cgt ccg act ttc aca caa gtc gct tct 432Gln Thr Leu Pro Pro Glu Gln Arg Pro Thr Phe Thr Gln Val Ala Ser 130 135 140 ctg gct gaa acg gcg caa caa gtt aac gcc gta tgg aag ttc gcc ctg 480Leu Ala Glu Thr Ala Gln Gln Val Asn Ala Val Trp Lys Phe Ala Leu 145 150 155 160 acg cac gat gac ctg ccg caa ttg cag cat ttt ggt aag cat gtc gaa 528Thr His Asp Asp Leu Pro Gln Leu Gln His Phe Gly Lys His Val Glu 165 170 175 cat gaa ctg gga ctg gag tgt gaa tgg tcc tgg cac gat cag gtt gat 576His Glu Leu Gly Leu Glu Cys Glu Trp Ser Trp His Asp Gln Val Asp 180 185 190 att gca cgc ggc ggc aac agc aaa ggt aaa cgt ttg acg aaa tgg gtt 624Ile Ala Arg Gly Gly Asn Ser Lys Gly Lys Arg Leu Thr Lys Trp Val 195 200 205 gag gcg caa ggt tgg tcg atg gaa aac gtc gtg gca ttc ggc gat aac 672Glu Ala Gln Gly Trp Ser Met Glu Asn Val Val Ala Phe Gly Asp Asn 210 215 220 ttt aat gat atc agt atg ctg gaa gcc gct ggt aca ggc gtg gcg atg 720Phe Asn Asp Ile Ser Met Leu Glu Ala Ala Gly Thr Gly Val Ala Met 225 230 235 240 ggc aac gcc gat gac gcg gta aaa gcg cgc gcc aac att gtg att ggt 768Gly Asn Ala Asp Asp Ala Val Lys Ala Arg Ala Asn Ile Val Ile Gly 245 250 255 gat aac acc acc gac agc att gcc cag ttc att tat agc cac ctg att 816Asp Asn Thr Thr Asp Ser Ile Ala Gln Phe Ile Tyr Ser His Leu Ile 260 265 270 taa 81985272PRTEscherichia coli 85Met Thr Thr Arg Val Ile Ala Leu Asp Leu Asp Gly Thr Leu Leu Thr 1 5 10 15 Pro Lys Lys Thr Leu Leu Pro Ser Ser Ile Glu Ala Leu Ala Arg Ala 20 25 30 Arg Glu Ala Gly Tyr Gln Leu Ile Ile Val Thr Gly Arg His His Val 35 40 45 Ala Ile His Pro Phe Tyr Gln Ala Leu Ala Leu Asp Thr Pro Ala Ile 50 55 60 Cys Cys Asn Gly Thr Tyr Leu Tyr Asp Tyr His Ala Lys Thr Val Leu 65 70 75 80 Glu Ala Asp Pro Met Pro Val Ile Lys Ala Leu Gln Leu Ile Glu Met 85 90 95 Leu Asn Glu His His Ile His Gly Leu Met Tyr Val Asp Asp Ala Met 100 105 110 Val Tyr Glu His Pro Thr Gly His Val Ile Arg Thr Ser Asn Trp Ala 115 120 125 Gln Thr Leu Pro Pro Glu Gln Arg Pro Thr Phe Thr Gln Val Ala Ser 130 135 140 Leu Ala Glu Thr Ala Gln Gln Val Asn Ala Val Trp Lys Phe Ala Leu 145 150 155 160 Thr His Asp Asp Leu Pro Gln Leu Gln His Phe Gly Lys His Val Glu 165 170 175 His Glu Leu Gly Leu Glu Cys Glu Trp Ser Trp His Asp Gln Val Asp 180 185 190 Ile Ala Arg Gly Gly Asn Ser Lys Gly Lys Arg Leu Thr Lys Trp Val 195 200 205 Glu Ala Gln Gly Trp Ser Met Glu Asn Val Val Ala Phe Gly Asp Asn 210 215 220 Phe Asn Asp Ile Ser Met Leu Glu Ala Ala Gly Thr Gly Val Ala Met 225 230 235 240 Gly Asn Ala Asp Asp Ala Val Lys Ala Arg Ala Asn Ile Val Ile Gly 245 250 255 Asp Asn Thr Thr Asp Ser Ile Ala Gln Phe Ile Tyr Ser His Leu Ile 260 265 270 861728DNAEscherichia coliCDS(1)..(1728) 86atg att tca ggc att tta gca tcc ccg ggt atc gct ttc ggt aaa gct 48Met Ile Ser Gly Ile Leu Ala Ser Pro Gly Ile Ala Phe Gly Lys Ala 1 5 10 15 ctg ctt ctg aaa gaa gac gaa att gtc att gac cgg aaa aaa att tct 96Leu Leu Leu Lys Glu Asp Glu Ile Val Ile Asp Arg Lys Lys Ile Ser 20 25 30 gcc gac cag gtt gat cag gaa gtt gaa cgt ttt ctg agc ggt cgt gcc 144Ala Asp Gln Val Asp Gln Glu Val Glu Arg Phe Leu Ser Gly Arg Ala 35 40 45 aag gca tca gcc cag ctg gaa acg atc aaa acg aaa gct ggt gaa acg 192Lys Ala Ser Ala Gln Leu Glu Thr Ile Lys Thr Lys Ala Gly Glu Thr 50 55 60 ttc ggt gaa gaa aaa gaa gcc atc ttt gaa ggg cat att atg ctg ctc 240Phe Gly Glu Glu Lys Glu Ala Ile Phe Glu Gly His Ile Met Leu Leu 65 70 75 80 gaa gat gag gag ctg gag cag gaa atc ata gcc ctg att aaa gat aag 288Glu Asp Glu Glu Leu Glu Gln Glu Ile Ile Ala Leu Ile Lys Asp Lys 85 90 95 cac atg aca gct gac gca gct gct cat gaa gtt atc gaa ggt cag gct 336His Met Thr Ala Asp Ala Ala Ala His Glu Val Ile Glu Gly Gln Ala 100 105 110 tct gcc ctg gaa gag ctg gat gat gaa tac ctg aaa gaa cgt gcg gct 384Ser Ala Leu Glu Glu Leu Asp Asp Glu Tyr Leu Lys Glu Arg Ala Ala 115 120 125 gac gta cgt gat atc ggt aag cgc ctg ctg cgc aac atc ctg ggc ctg 432Asp Val Arg Asp Ile Gly Lys Arg Leu Leu Arg Asn Ile Leu Gly Leu 130 135 140 aag att atc gac ctg agc gcc att cag gat gaa gtc att ctg gtt gcc 480Lys Ile Ile Asp Leu Ser Ala Ile Gln Asp Glu Val Ile Leu Val Ala 145 150 155 160 gct gac ctg acg ccg tcc gaa acc gca cag ctg aac ctg aag aag gtg 528Ala Asp Leu Thr Pro Ser Glu Thr Ala Gln Leu Asn Leu Lys Lys Val 165 170 175 ctg ggt ttc atc acc gac gcg ggt ggc cgt act tcc cac acc tct atc 576Leu Gly Phe Ile Thr Asp Ala Gly Gly Arg Thr Ser His Thr Ser Ile 180 185 190 atg gcg cgt tct ctg gaa cta cct gct atc gtg ggt acc ggt agc gtc 624Met Ala Arg Ser Leu Glu Leu Pro Ala Ile Val Gly Thr Gly Ser Val 195 200 205 acc tct cag gtg aaa aat gac gac tat ctg att ctg gat gcc gta aat 672Thr Ser Gln Val Lys Asn Asp Asp Tyr Leu Ile Leu Asp Ala Val Asn 210 215 220 aat cag gtt tac gtc aat cca acc aac gaa gtt att gat aaa atg cgc 720Asn Gln Val Tyr Val Asn Pro Thr Asn Glu Val Ile Asp Lys Met Arg 225 230 235 240 gct gtt cag gag caa gtg gct tct gaa aaa gca gag ctt gct aaa ctg 768Ala Val Gln Glu Gln Val Ala Ser Glu Lys Ala Glu Leu Ala Lys Leu 245 250 255 aaa gat ctg cca gct att acg ctg gac ggt cac cag gta gaa gta tgc 816Lys Asp Leu Pro Ala Ile Thr Leu Asp Gly His Gln Val Glu Val Cys 260 265 270 gct aac att ggt acg gtt cgt gac gtt gaa ggt gca gag cgt aac ggc 864Ala Asn Ile Gly Thr Val Arg Asp Val Glu Gly Ala Glu Arg Asn Gly 275 280 285 gct gaa ggc gtt ggt ctg tat cgt act gag ttc ctg ttc atg gac cgc 912Ala Glu Gly Val Gly Leu Tyr Arg Thr Glu Phe Leu Phe Met Asp Arg 290 295 300 gac gca ctg ccc act gaa gaa gaa cag ttt gct gct tac aaa gca gtg 960Asp Ala Leu Pro Thr Glu Glu Glu Gln Phe Ala Ala Tyr Lys Ala Val 305 310 315 320 gct gaa gcg tgt ggc tcg caa gcg gtt atc gtt cgt acc atg gac atc 1008Ala Glu Ala Cys Gly Ser Gln Ala Val Ile Val Arg Thr Met Asp Ile 325 330 335 ggc ggc gac aaa gag ctg cca tac atg aac ttc ccg aaa gaa gag aac 1056Gly Gly Asp Lys Glu Leu Pro Tyr Met Asn Phe Pro Lys Glu Glu Asn 340 345 350 ccg ttc ctc ggc tgg cgc gct atc cgt atc gcg atg gat cgt aga gag 1104Pro Phe Leu Gly Trp Arg Ala Ile Arg Ile Ala Met Asp Arg Arg Glu 355 360 365 atc ctg cgc gat cag ctc cgc gct atc ctg cgt gcc tcg gct ttc ggt 1152Ile Leu Arg Asp Gln Leu Arg Ala Ile Leu Arg Ala Ser Ala Phe Gly 370 375 380 aaa ttg cgc att atg ttc ccg atg atc atc tct gtt gaa gaa gtg cgt 1200Lys Leu Arg Ile Met Phe Pro Met Ile Ile Ser Val Glu Glu Val Arg 385 390 395 400 gca ctg cgc aaa gag atc gaa atc tac aaa cag gaa ctg cgc gac gaa 1248Ala Leu Arg Lys Glu Ile Glu Ile Tyr Lys Gln Glu Leu Arg Asp Glu 405 410 415 ggt aaa gcg ttt gac gag tca att gaa atc ggc gta atg gtg gaa aca 1296Gly Lys Ala Phe Asp Glu Ser Ile Glu Ile Gly Val Met Val Glu Thr 420 425 430 ccg gct gcc gca aca att gca cgt cat tta gcc aaa gaa gtt gat ttc 1344Pro Ala Ala Ala Thr Ile Ala Arg His Leu Ala Lys Glu Val Asp Phe 435 440 445 ttt agt atc ggc acc aat gat tta acg cag tac act ctg gca gtt gac 1392Phe Ser Ile Gly Thr Asn Asp Leu Thr Gln Tyr Thr Leu Ala Val Asp 450 455 460 cgt ggt aat gat atg att tca cac ctt tac cag cca atg tca ccg tcc 1440Arg Gly Asn Asp Met Ile Ser His Leu Tyr Gln Pro Met Ser Pro Ser 465 470 475 480 gtg ctg aac ttg atc aag caa gtt att gat gct tct cat gct gaa ggc 1488Val Leu Asn Leu Ile Lys Gln Val Ile Asp Ala Ser His Ala Glu Gly 485 490 495 aaa tgg act ggc atg tgt ggt gag ctt gct ggc gat gaa cgt gct aca 1536Lys Trp Thr Gly Met Cys Gly Glu Leu Ala Gly Asp Glu Arg Ala Thr 500 505 510 ctt ctg ttg ctg ggg atg ggt ctg gac gaa ttc tct atg agc gcc att 1584Leu Leu Leu Leu Gly Met Gly Leu Asp Glu Phe Ser Met Ser Ala Ile 515 520 525 tct atc ccg cgc att aag aag att atc cgt aac acg aac ttc gaa gat 1632Ser Ile Pro Arg Ile Lys Lys Ile Ile Arg Asn Thr Asn Phe Glu Asp 530 535 540 gcg aag gtg tta gca gag cag gct ctt gct caa ccg aca acg gac gag 1680Ala Lys Val Leu Ala Glu Gln Ala Leu Ala Gln Pro Thr Thr Asp Glu 545 550 555 560 tta atg acg ctg gtt aac aag ttc att gaa gaa aaa aca atc tgc taa 1728Leu Met Thr Leu Val Asn Lys Phe Ile Glu Glu Lys Thr Ile Cys 565 570 575 87575PRTEscherichia coli 87Met Ile Ser Gly Ile Leu Ala Ser Pro Gly Ile Ala Phe Gly Lys Ala 1 5 10 15 Leu Leu Leu Lys Glu Asp Glu Ile Val Ile Asp Arg Lys Lys Ile Ser 20 25 30 Ala Asp Gln Val Asp Gln Glu Val Glu Arg Phe Leu Ser Gly Arg Ala 35 40 45 Lys Ala Ser Ala Gln Leu Glu

Thr Ile Lys Thr Lys Ala Gly Glu Thr 50 55 60 Phe Gly Glu Glu Lys Glu Ala Ile Phe Glu Gly His Ile Met Leu Leu 65 70 75 80 Glu Asp Glu Glu Leu Glu Gln Glu Ile Ile Ala Leu Ile Lys Asp Lys 85 90 95 His Met Thr Ala Asp Ala Ala Ala His Glu Val Ile Glu Gly Gln Ala 100 105 110 Ser Ala Leu Glu Glu Leu Asp Asp Glu Tyr Leu Lys Glu Arg Ala Ala 115 120 125 Asp Val Arg Asp Ile Gly Lys Arg Leu Leu Arg Asn Ile Leu Gly Leu 130 135 140 Lys Ile Ile Asp Leu Ser Ala Ile Gln Asp Glu Val Ile Leu Val Ala 145 150 155 160 Ala Asp Leu Thr Pro Ser Glu Thr Ala Gln Leu Asn Leu Lys Lys Val 165 170 175 Leu Gly Phe Ile Thr Asp Ala Gly Gly Arg Thr Ser His Thr Ser Ile 180 185 190 Met Ala Arg Ser Leu Glu Leu Pro Ala Ile Val Gly Thr Gly Ser Val 195 200 205 Thr Ser Gln Val Lys Asn Asp Asp Tyr Leu Ile Leu Asp Ala Val Asn 210 215 220 Asn Gln Val Tyr Val Asn Pro Thr Asn Glu Val Ile Asp Lys Met Arg 225 230 235 240 Ala Val Gln Glu Gln Val Ala Ser Glu Lys Ala Glu Leu Ala Lys Leu 245 250 255 Lys Asp Leu Pro Ala Ile Thr Leu Asp Gly His Gln Val Glu Val Cys 260 265 270 Ala Asn Ile Gly Thr Val Arg Asp Val Glu Gly Ala Glu Arg Asn Gly 275 280 285 Ala Glu Gly Val Gly Leu Tyr Arg Thr Glu Phe Leu Phe Met Asp Arg 290 295 300 Asp Ala Leu Pro Thr Glu Glu Glu Gln Phe Ala Ala Tyr Lys Ala Val 305 310 315 320 Ala Glu Ala Cys Gly Ser Gln Ala Val Ile Val Arg Thr Met Asp Ile 325 330 335 Gly Gly Asp Lys Glu Leu Pro Tyr Met Asn Phe Pro Lys Glu Glu Asn 340 345 350 Pro Phe Leu Gly Trp Arg Ala Ile Arg Ile Ala Met Asp Arg Arg Glu 355 360 365 Ile Leu Arg Asp Gln Leu Arg Ala Ile Leu Arg Ala Ser Ala Phe Gly 370 375 380 Lys Leu Arg Ile Met Phe Pro Met Ile Ile Ser Val Glu Glu Val Arg 385 390 395 400 Ala Leu Arg Lys Glu Ile Glu Ile Tyr Lys Gln Glu Leu Arg Asp Glu 405 410 415 Gly Lys Ala Phe Asp Glu Ser Ile Glu Ile Gly Val Met Val Glu Thr 420 425 430 Pro Ala Ala Ala Thr Ile Ala Arg His Leu Ala Lys Glu Val Asp Phe 435 440 445 Phe Ser Ile Gly Thr Asn Asp Leu Thr Gln Tyr Thr Leu Ala Val Asp 450 455 460 Arg Gly Asn Asp Met Ile Ser His Leu Tyr Gln Pro Met Ser Pro Ser 465 470 475 480 Val Leu Asn Leu Ile Lys Gln Val Ile Asp Ala Ser His Ala Glu Gly 485 490 495 Lys Trp Thr Gly Met Cys Gly Glu Leu Ala Gly Asp Glu Arg Ala Thr 500 505 510 Leu Leu Leu Leu Gly Met Gly Leu Asp Glu Phe Ser Met Ser Ala Ile 515 520 525 Ser Ile Pro Arg Ile Lys Lys Ile Ile Arg Asn Thr Asn Phe Glu Asp 530 535 540 Ala Lys Val Leu Ala Glu Gln Ala Leu Ala Gln Pro Thr Thr Asp Glu 545 550 555 560 Leu Met Thr Leu Val Asn Lys Phe Ile Glu Glu Lys Thr Ile Cys 565 570 575 881740DNAArtificial sequenceattR-cat-attL-PtacM2-SD-spacer 88tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tctctcccca tccccctgtg tacaattaat 1680catcggctcg tataatgtgt ggaattgtga gcggataaca atttcacaca ggagactgcc 1740891740DNAArtificial sequenceattR-cat-attL-PtacM3-SD-spacer 89tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tctctcccca tccccctgtt ggcaattaat 1680catcggctcg tataatgtgt ggaattgtga gcggataaca atttcacaca ggagactgcc 1740902847DNAArtificial sequencePtacM2gldA::Cm 90tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tcttctctcc ccatccccct gtgtacaatt 1680aatcatcggc tcgtataatg tgtggaattg tgagcggata acaatttcac acaggagact 1740gccatggacc gcattattca atcaccgggt aaatacatcc agggcgctga tgtgattaat 1800cgtctgggcg aatacctgaa gccgctggca gaacgctggt tagtggtggg tgacaaattt 1860gttttaggtt ttgctcaatc cactgtcgag aaaagcttta aagatgctgg actggtagta 1920gaaattgcgc cgtttggcgg tgaatgttcg caaaatgaga tcgaccgtct gcgtggcatc 1980gcggagactg cgcagtgtgg cgcaattctc ggtatcggtg gcggaaaaac cctcgatact 2040gccaaagcac tggcacattt catgggtgtt ccggtagcga tcgcaccgac tatcgcctct 2100accgatgcac cgtgcagcgc attgtctgtt atctacaccg atgagggtga gtttgaccgc 2160tatctgctgt tgccaaataa cccgaatatg gtcattgtcg acaccaaaat cgtcgctggc 2220gcacctgcac gtctgttagc ggcgggtatc ggcgatgcgc tggcaacctg gtttgaagcg 2280cgtgcctgct ctcgtagcgg cgcgaccacc atggcgggcg gcaagtgcac ccaggctgcg 2340ctggcactgg ctgaactgtg ctacaacacc ctgctggaag aaggcgaaaa agcgatgctt 2400gctgccgaac agcatgtagt gactccggcg ctggagcgcg tgattgaagc gaacacctat 2460ttgagcggtg ttggttttga aagtggtggt ctggctgcgg cgcacgcagt gcataacggc 2520ctgaccgcta tcccggacgc gcatcactat tatcacggtg aaaaagtggc attcggtacg 2580ctgacgcagc tggttctgga aaatgcgccg gtggaggaaa tcgaaaccgt agctgccctt 2640agccatgcgg taggtttgcc aataactctc gctcaactgg atattaaaga agatgtcccg 2700gcgaaaatgc gaattgtggc agaagcggca tgtgcagaag gtgaaaccat tcacaacatg 2760cctggcggcg cgacgccaga tcaggtttac gccgctctgc tggtagccga ccagtacggt 2820cagcgtttcc tgcaagagtg ggaataa 2847912847DNAArtificial sequencePtacM3gldA::Cm 91tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tcttctctcc ccatccccct gttggcaatt 1680aatcatcggc tcgtataatg tgtggaattg tgagcggata acaatttcac acaggagact 1740gccatggacc gcattattca atcaccgggt aaatacatcc agggcgctga tgtgattaat 1800cgtctgggcg aatacctgaa gccgctggca gaacgctggt tagtggtggg tgacaaattt 1860gttttaggtt ttgctcaatc cactgtcgag aaaagcttta aagatgctgg actggtagta 1920gaaattgcgc cgtttggcgg tgaatgttcg caaaatgaga tcgaccgtct gcgtggcatc 1980gcggagactg cgcagtgtgg cgcaattctc ggtatcggtg gcggaaaaac cctcgatact 2040gccaaagcac tggcacattt catgggtgtt ccggtagcga tcgcaccgac tatcgcctct 2100accgatgcac cgtgcagcgc attgtctgtt atctacaccg atgagggtga gtttgaccgc 2160tatctgctgt tgccaaataa cccgaatatg gtcattgtcg acaccaaaat cgtcgctggc 2220gcacctgcac gtctgttagc ggcgggtatc ggcgatgcgc tggcaacctg gtttgaagcg 2280cgtgcctgct ctcgtagcgg cgcgaccacc atggcgggcg gcaagtgcac ccaggctgcg 2340ctggcactgg ctgaactgtg ctacaacacc ctgctggaag aaggcgaaaa agcgatgctt 2400gctgccgaac agcatgtagt gactccggcg ctggagcgcg tgattgaagc gaacacctat 2460ttgagcggtg ttggttttga aagtggtggt ctggctgcgg cgcacgcagt gcataacggc 2520ctgaccgcta tcccggacgc gcatcactat tatcacggtg aaaaagtggc attcggtacg 2580ctgacgcagc tggttctgga aaatgcgccg gtggaggaaa tcgaaaccgt agctgccctt 2640agccatgcgg taggtttgcc aataactctc gctcaactgg atattaaaga agatgtcccg 2700gcgaaaatgc gaattgtggc agaagcggca tgtgcagaag gtgaaaccat tcacaacatg 2760cctggcggcg cgacgccaga tcaggtttac gccgctctgc tggtagccga ccagtacggt 2820cagcgtttcc tgcaagagtg ggaataa 2847922903DNAArtificial sequencePtacM fsaB-gldA::Cm 92tctagacgct caagttagta taaaaaagct gaacgagaaa cgtaaaatga tataaatatc 60aatatattaa attagatttt gcataaaaaa cagactacat aatactgtaa aacacaacat 120atgcagtcac tatgaatcaa ctacttagat ggtattagtg acctgtaaca gactgcagtg 180gtcgaaaaaa aaagcccgca ctgtcaggtg cgggcttttt tctgtgttaa gcttcgacga 240atttctgcca ttcatccgct tattatcact tattcaggcg tagcaccagg cgtttaaggg 300caccaataac tgccttaaaa aaattacgcc ccgccctgcc actcatcgca gtactgttgt 360aattcattaa gcattctgcc gacatggaag ccatcacaga cggcatgatg aacctgaatc 420gccagcggca tcagcacctt gtcgccttgc gtataatatt tgcccatggt gaaaacgggg 480gcgaagaagt tgtccatatt ggccacgttt aaatcaaaac tggtgaaact cacccaggga 540ttggctgaga cgaaaaacat attctcaata aaccctttag ggaaataggc caggttttca 600ccgtaacacg ccacatcttg cgaatatatg tgtagaaact gccggaaatc gtcgtggtat 660tcactccaga gcgatgaaaa cgtttcagtt tgctcatgga aaacggtgta acaagggtga 720acactatccc atatcaccag ctcaccgtct ttcattgcca tacggaattc cggatgagca 780ttcatcaggc gggcaagaat gtgaataaag gccggataaa acttgtgctt atttttcttt 840acggtcttta aaaaggccgt aatatccagc tgaacggtct ggttataggt acattgagca 900actgactgaa atgcctcaaa atgttcttta cgatgccatt gggatatatc aacggtggta 960tatccagtga tttttttctc cattttagct tccttagctc ctgaaaatct cggatccggc 1020caagctagct tggctctagc tagagcgccc ggttgacgct gctagtgtta cctagcgatt 1080tgtatcttac tgcatgttac ttcatgttgt caatacctgt ttttcgtgcg acttatcagg 1140ctgtctactt atccggagat ccacaggacg ggtgtggtcg ccatgatcgc gtagtcgata 1200gtggctccaa gtagcgaagc gagcaggact gggcggcggc caaagcggtc ggacagtgct 1260ccgagaacgg gtgcgcatag aaattgcatc aacgcatata gcgctagcag cacgccatag 1320tgactggcga tgctgtcgga atggacgata tcccgcaaga ggcccggcag taccggcata 1380accaagccta tgcctacagc atccagggtg acggtgccga ggatgacgat gagcgcattg 1440ttagatttca tacacggtgc ctgactgcgt tagcaattta actgtgataa actaccgcat 1500taaagcttat cgatgataag ctgtcaaaca tgagaattcg aaatcaaata atgattttat 1560tttgactgat agtgacctgt tcgttgcaac aaattgataa gcaatgcttt tttataatgc 1620caacttagta taaaaaagca ggcttcaaga tcttctctcc ccatccccct gttcacaatt 1680aatcatcggc tcgtataatg tgtggaattg tgagcggata acaatttcac acaggacatc 1740atggaactgt atctggacac cgctaacgtc gcagaagtcg aacgtctggc acgcatattc 1800cccattgccg gggtgacaac taacccgagc attatcgctg ccagcaagga gtccatatgg 1860gaagtgctgc cgcgtctgca aaaagcgatt ggtgatgagg gcattctgtt tgctcagacc 1920atgagccgcg acgcgcaggg gatggtggaa gaagcgaagc gcctgcgcga cgctattccg 1980ggtattgtgg tgaaaatccc ggtgacttcc gaaggtctgg cagcaattaa aatactgaaa 2040aaagagggta ttactacact tggcactgct gtatatagcg ccgcacaagg gttattagcc 2100gcactggcag gggcaaaata cgttgctccg tatgttaacc gcgtagatgc ccagggcgga

2160gacggcattc gtacggttca ggagctgcaa acgctgttag aaatgcacgc gccagaaagc 2220atggtgctgg cagccagctt taaaacgccg cgtcaggcgc tggactgttt actggcagga 2280tgtgaatcca tcaccctgcc cttagatgta gcgcaacaaa tgctcaacac ccctgcggta 2340gagtcagcta tagagaagtt cgaacacgac tggaatgccg catttggcac tactcatctc 2400taaaggagca attatggacc gcattattca atcaccgggt aaatacatcc agggcgctga 2460tgtgattaat cgtctgggcg aatacctgaa gccgctggca gaacgctggt tagtggtggg 2520tgacaaattt gttttaggtt ttgctcaatc cactgtcgag aaaagcttta aagatgctgg 2580actggtagta gaaattgcgc cgtttggcgg tgaatgttcg caaaatgaga tcgaccgtct 2640gcgtggcatc gcggagactg cgcagtgtgg cgcaattctc ggtatcggtg gcggaaaaac 2700cctcgatact gccaaagcac tggcacattt catgggtgtt ccggtagcga tcgcaccgac 2760tatcgcctct accgatgcac cgtgcagcgc attgtctgtt atctacaccg atgagggtga 2820gtttgaccgc tatctgctgt tgccaaataa cccgaatatg gtcattgtcg acaccaaaat 2880cgtcgctggc gcacctgcac gtc 29039379DNAArtificial sequenceatL-Ptac-fsaB 93tgcgtgccag acgttcgact tctgcgacgt tagcggtgtc cagatacagt tccatgatgt 60cctgtgtgaa attgttatc 799477DNAArtificial sequenceatR-Ptac-fsaB 94aacgccgcct ctgccgacgc tatcgccagc ctgctgcaac atgaactgga actgtaaatc 60tagacgctca agttagt 77

Claims

1. A method for producing an L-amino acid, the method comprising: (A) providing a microorganism belonging to the family Enterobacteriaceae having an L-amino acid-producing ability and modified to increase glycerol dehydrogenase and dihydroxyacetone kinase activities, (B) culturing said microorganism in a medium containing glycerol as a carbon source to produce and accumulate an L-amino acid in the medium or cells, and (C) collecting the L-amino acid from the medium or the cells.

2. The method according to claim 1, wherein the glycerol dehydrogenase and dihydroxyacetone kinase activities are increased by increasing copy numbers of genes coding for glycerol dehydrogenase and dihydroxyacetone kinase, or modifying expression control sequences of the genes.

3. The method according to claim 1, wherein the dihydroxyacetone kinase uses ATP as a phosphate donor.

4. The method according to claim 1, wherein the microorganism is further modified to increase glycerol uptake activity.

5. The method according to claim 1, wherein the microorganism is further modified to increase activity or activities of an enzyme selected from the group consisting of triosephosphate isomerase, fructose bisphosphate aldolase, fructose-1,6-bisphosphatase, fructose-6-phosphate aldolase, and combinations thereof.

6. The method according to claim 1, wherein the microorganism is further modified to reduce activity or activities of glycerol kinase and/or membrane-binding type glycerol-3-phosphate dehydrogenase.

7. The method according to claim 1, wherein the microorganism belonging to the family Enterobacteriaceae is an Escherichia bacterium, or a Pantoea bacterium.

8. The method according to claim 1, wherein the L-amino acid is selected from the group consisting of L-glutamic acid, L-lysine, L-leucine, L-isoleucine, L-valine, L-tryptophan, L-phenylalanine, L-tyrosine, L-threonine, L-methionine, L-cysteine, L-arginine, L-serine, L-proline, L-asparatic acid, L-asparagine, L-glutamine, L-histidine, and combinations thereof.