U.S. patent application number 13/182517 was filed with the patent office on 2012-05-03 for method for screening anticancer substances, set or kit for implementing said method.
This patent application is currently assigned to CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE. Invention is credited to Marion De Toledo, Pierre Roux.
Application Number | 20120107837 13/182517 |
Document ID | / |
Family ID | 36177712 |
Filed Date | 2012-05-03 |
United States Patent
Application |
20120107837 |
Kind Code |
A1 |
Roux; Pierre ; et
al. |
May 3, 2012 |
METHOD FOR SCREENING ANTICANCER SUBSTANCES, SET OR KIT FOR
IMPLEMENTING SAID METHOD
Abstract
A method for screening anticancer substances including the
following steps: a) obtaining a culture of tumour cells which do
not express E-cadherin on their cell membrane; b) bringing the
cells obtained at step a) into contact with a candidate substance
or a combination of candidate substances; c) detecting, in the
culture of cells obtained at the end of step b), the presence of
E-cadherin at the cell surface; d) positively selecting the
candidate substance or combination of candidate substances when the
E-cadherin has been detected at step c).
Inventors: |
Roux; Pierre;
(Saint-Gely-Du-Fesc, FR) ; De Toledo; Marion;
(Montpellier, FR) |
Assignee: |
CENTRE NATIONAL DE LA RECHERCHE
SCIENTIFIQUE
PARIS CEDEX
FR
|
Family ID: |
36177712 |
Appl. No.: |
13/182517 |
Filed: |
July 14, 2011 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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11917522 |
Jul 18, 2008 |
8062859 |
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PCT/FR2006/050561 |
Jun 14, 2006 |
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13182517 |
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Current U.S.
Class: |
435/7.23 |
Current CPC
Class: |
A61P 35/00 20180101;
G01N 33/5011 20130101 |
Class at
Publication: |
435/7.23 |
International
Class: |
G01N 33/566 20060101
G01N033/566 |
Foreign Application Data
Date |
Code |
Application Number |
Jun 14, 2005 |
FR |
0551616 |
Claims
1. A method for screening antimetastatic anticancer substances
which do not act directly on the expression of E-cadherin, said
method comprising the following steps: a) growing tumour cells with
the capacity for forming metastases and which do not express
E-cadherin on their cell membrane; b) bringing the cultivated cells
obtained at step a) into contact with a candidate substance or a
combination of candidate substances; c) detecting, in the culture
of cells obtained at the end of step b), the presence of E-cadherin
at the cell surface; d) positively selecting the candidate
substance, or the combination of candidate substances, when the
E-cadherin has been detected at step c).
2. The method according to claim 1, wherein at step c), the
detection is carried out by bringing the cells obtained at the end
of step b) into contact with a ligand compound of E-cadherin.
3. The method according to claim 2, wherein the E-cadherin ligand
compound binds to the extracellular portion of E-cadherin.
4. The method according to claim 2, wherein the ligand compound is
labelled with a detectable molecule.
5. The method according to claim 2, wherein at step c), a secondary
ligand compound that binds to the E-cadherin ligand compound is
used, the said second ligand compound being labelled with a
detectable molecule.
6. The method according to claim 2, wherein the ligand compound
consists of an anti-E-cadherin antibody.
7. The method according to claim 6, wherein at step c), a secondary
ligand compound that binds to the anti-E-cadherin antibody is used,
the said second ligand compound being labelled with a detectable
molecule.
8. The method according to claim 7, wherein the secondary ligand
compound comprises a streptavidin molecule coupled to, or fused
with, an enzyme.
9. The method according to claim 7, wherein the second ligand
compound is an antibody directed against the anti-E-cadherin
antibody.
10. A set or kit for screening antimetastatic anticancer substances
which are capable of reversing metastatic phenotype to a non
metastatic phenotype and which do not act directly on the
expression of E-cadherin, said set or kit, comprising: a) tumour
cells having the capacity for forming metastases and which do not
express E-cadherin on their cell membrane; and b) a ligand compound
of E-cadherin.
11. The set or kit according to claim 10, wherein the E-cadherin
ligand compound binds to the extracellular portion of
E-cadherin.
12. The set or kit according to claim 10, wherein the E-cadherin
ligand compound consists of an anti-E-cadherin antibody.
13. The set or kit according to claim 10, wherein it also contains
a secondary ligand compound capable of binding to the E-cadherin
ligand compound, the said second ligand compound being labelled
with a detectable molecule.
14. The set or kit according to claim 13, wherein the second ligand
compound is an antibody directed against the anti-E-cadherin
antibody.
15. The set or kit according to claim 14, wherein the secondary
ligand compound comprises (i) an antibody directed against the
anti-E cadherin antibody and (ii) an anti-peroxidase antibody, said
anti-peroxidase antibody being bound to two peroxidase molecules at
its antigen binding site (CDR).
Description
SUMMARY OF THE INVENTION
[0001] This invention pertains to the field of the identification
of molecules of therapeutic interest for cancer treatment.
[0002] The object of this invention is a method for screening
anticancer substances comprising the following steps:
a) obtaining a culture of tumour cells which do not express
E-cadherin on their cell membrane; b) bringing the cells obtained
at step a) into contact with a candidate substance or a combination
of candidate substances; c) detecting, in the cell culture obtained
at the end of step b), the presence of E-cadherin at the cell
surface; d) positively selecting the candidate substance or the
combination of candidate substances when E-cadherin has been
detected at step c).
[0003] The object of this invention is also a set or kit for
screening anticancer substances comprising:
a) tumour cells which do not express E-cadherin on their cell
membrane; b) a ligand compound of E-cadherin.
[0004] The invention also relates to the use of a ligand compound
of the extracellular portion of E-cadherin for the in vitro
screening of cancerous substances.
PRIOR ART
[0005] It is known that, in certain cancers, tumour cells have not
only a great ability to proliferate, but also a great capacity for
destroying tissue and invading neighbouring tissue, including blood
vessels and lymph vessels, then migrating in the circulatory system
to tissues in parts of the body far away from the primary tumour.
Thus, in certain cancers, tumour cells have the capacity to
circulate and form secondary tumours, also called metastases, in
tissues distant from the primary tumour.
[0006] As stated above, the formation of metastases is a
physiological phenomenon involving multiple steps, during which
tumour cells leave the primary tumour, invade the cell matrix,
penetrate the blood vessels, enter the vascular system by
intravasation, then stop their migration in the blood or lymph
circulation at a distant site, leave the circulation by
extravasation, bind to distant tissue and proliferate to form a
secondary tumour.
[0007] Different molecules are likely to play a role in the
formation of metastases, including certain chemokine receptors and
integrin receptors.
[0008] Notably, it has been shown in the art that certain proteins
belonging to the cadherin family are likely to be involved in the
physiological mechanisms leading to the formation of
metastases.
[0009] The cadherin family is a family of proteins that regulate
the adhesion of epithelial, endothelial, neural or cancer cells.
Different types of cadherins are expressed depending on the tissue,
such as (i) N-cadherin, which is mainly expressed by neural cells,
endothelial cells and different types of cancer cells; (ii)
E-cadherin, which is expressed exclusively by epithelial cells;
(iii) P-cadherin, which is found in the skin, in humans; (iv)
R-cadherin, which is expressed in the retina.
[0010] Due to the involvement of cadherins in cell adhesion,
various methods and products have been proposed in the prior art,
that are able to modulate the regulation of the cell adhesion of
these proteins. Thus, in the American patent application no US
2003/0109454, the applicants suggested to modify the functions of
the cadherins using protein modulating agents comprising at least
one "HAV" motif, which motif is essential for the interaction
between two cadherin molecules, also called homotypic interaction.
According to this American patent application, such modulating
agents are able to act on cell adhesion and thus facilitate the
diffusion of drugs through the tissues. The American patent
application no US 2003/109454 also describes a method that makes it
possible to select agents modulating cell adhesion, by positively
selecting candidate compounds binding to antibodies directed
against a sequence containing an HAV adhesion motif. Also, the
American patent application no US 2002/0192724 describes the use of
proteins, particularly antibodies, which bind to certain
extracellular regions of the cadherins, in order to modulate the
adhesion of T lymphocytes to cells expressing cadherins.
[0011] Mention can also be made of the U.S. Pat. No. 6,468,790
which describes the protein sequences that constitute metastatic
markers for breast and colon cancers. Among the many markers
described, E-cadherin is mentioned, due to the fact that (i)
messenger RNA encoding E-cadherin is found in the cell extracts of
a non-metastatic breast cancer cell line (MCF7), but (ii) messenger
RNA encoding E-cadherin is not found in the cell extracts of two
non-metastatic breast cancer cell lines (MDA-MB-231 and
MDA-MB-435). In the U.S. Pat. No. 6,468,790, the applicants propose
detecting the level of expression of these protein markers, or the
expression level of their corresponding genes or messenger RNAs, in
order to determine the cancers that are liable to spread by forming
metastases. U.S. Pat. No. 6,468,790 also proposes screening methods
for agents likely to have an antimetastatic effect. According to
these screening methods, the candidate compound to be tested is
incubated with cancerous cells and the expression level of the
protein marker, or of the corresponding gene or messenger RNA, is
determined. The level of expression of the marker protein is
determined either (i) by incorporating labelled amino acids into
the cells, then detecting the labelled marker proteins on a
polyacrylamide gel, or (ii) by detecting the marker proteins with
specific antibodies, by immunoblotting (also called Western blot
tests). The expression level of the gene encoding the marker
protein of interest is determined by analysing the messenger RNAs,
using the well known Northern blot technique.
[0012] However, the mechanisms of the initiation and development of
cancerous metastases cannot be explained by the involvement of
E-cadherin alone, and many other factors are known to be involved
in these mechanisms. Thus, in the U.S. Pat. No. 6,468,790, although
an inactivation of expression of proteins such as E-cadherin by
metastatic breast cancer cells is shown, no result is presented to
show (i) that inactivation of E-cadherin expression is likely to
transform a cancer cell into a metastatic cancer cell, or on the
contrary (ii) that an activation of E-cadherin expression is likely
to transform a metastatic cancer cell into a non-metastatic cancer
cell.
[0013] Thus, to the knowledge of the applicant, to date no
technical means exists that would make it possible to determine the
potentially metastatic nature of a cancer cell.
[0014] Moreover, to the knowledge of the applicant, no method
exists that makes it possible to screen antimetastatic compounds
under conditions close to those of cell physiology.
[0015] However, the formation of metastases of cancerous cells is a
bad prognosis for the patient, because this situation necessitates,
due to the geographical dispersion of the metastases, the use of
systemic antimetastatic treatments, exclusively.
[0016] There is thus a need in the art for identifying new
compounds able to inhibit the migration of tumour cells and thus to
prevent the formation of metastases, and consequently, to identify
reliable screening methods that make it possible to select these
new antimetastatic compounds.
DESCRIPTION OF THE INVENTION
[0017] This invention provides a method for screening anticancer
substances, and more specifically for screening antimetastatic
substances.
[0018] Surprisingly, the applicant has shown that a strict
correlation exists between the induction of the loss of migratory
capacity and invasive capacity of initially metastatic cells, and
the induction of the formation of intercellular junctions involving
the presence of E-cadherin. The applicant's demonstration of this
surprising correlation allowed him to design and develop a method
for screening antimetastatic substances which makes use of
initially metastatic cancer cells, and which comprises a step
during which the presence of E-cadherin exposed at the cell surface
of cells previously treated with a candidate substance, or with a
combination of candidate substances, is detected.
[0019] The object of this invention is a method for screening
anticancer substances comprising the following steps:
a) obtaining a culture of tumour cells which do not express
E-cadherin on their cell membrane; b) bringing the cells obtained
at step a) into contact with a candidate substance or a combination
of candidate substances; c) detecting, in the cell culture obtained
at the end of step b), the presence of E-cadherin at the cell
surface; d) positively selecting the candidate substance or
combination of candidate substances when E-cadherin has been
detected at step c).
[0020] The term "anticancer substances" as used according to the
present invention is understood to mean substances able to make
cancerous cells with a metastatic cell phenotype revert to a
non-metastatic phenotype. Among the anticancer substances likely to
be positively selected by the method of the invention, some of them
will not modify the proliferation capacity of initially metastatic
cancer cells. But other anticancer substances likely to be
positively selected by the method of the invention will be able
both to induce a reversion of the metastatic phenotype to a
non-metastatic phenotype and to inhibit or block the proliferation
capacity of initially cancerous and metastatic cells.
[0021] Due to the strict correlation which has been shown according
to the invention between the inhibition of the invasive power of
the cancerous cells and the presence of exposed E-cadherin on the
surface of the cell membranes, the aforementioned method enables
screening of anticancer candidate substances, and in all instances
antimetastatic candidate substances, under conditions in which the
cells tested are in a situation close to their in vivo
physiological situation.
[0022] In particular, the method of the invention makes it possible
to screen anticancer substances, especially antimetastatic
substances, which do not act directly on the expression of
E-cadherin. Notably, the screening method according to the
invention allows positive selection of anticancer substances,
especially antimetastatic substances, which are active on various
targets in the cell, as long as their antimetastatic capacity is in
all instances verified by their capacity to make the phenotype of
treated cells revert to a non-metastatic cell phenotype, by forming
intercellular junctions, which is determined by detecting the
presence of E-cadherin at the surface of the cell membranes.
[0023] The aforementioned method makes it possible to screen the
candidate substances directly on living cells, and thus allows
positive selection of substances having the physiological effect of
inhibiting or blocking the capacity of the cell to form
metastases.
[0024] As is shown in the examples, the method of the invention is
particularly suitable for the screening of anticancer substances,
especially antimetastatic substances that are active on the
metastatic cancer cells derived from epithelial cells. It has thus
been shown that the method of the invention enables successful
selection of substances that make mesenchymal cancer cells revert
to a phenotype of epithelial cells that are again able to form
intercellular junctions.
[0025] Another advantage of the method according to the invention
is that this method enables positive selection, exclusively of
anticancer substances, especially antimetastatic substances, which
are not cytotoxic. This is because all the candidate substances
that are toxic to cells, since they kill the cells, are not able to
induce any physiological change in the cells, and particularly are
not able to cause them to revert to the non-metastatic phenotype,
with re-formation of intercellular junctions in the presence of
E-cadherin. Thus cytotoxic candidate substances will never be
positively selected using the method of the invention.
[0026] At step a) of the method, it is advantageous to use
metastatic tumour cells which do not express E-cadherin, which are
derived from epithelial cells. In general, these metastatic cells
consist of cells of epithelial origin that have lost their
epithelial cell phenotype, and that have acquired cell motility
properties due to reorganisation of the cytoskeleton and also due
to the formation of new types of contact with the extracellular
matrix. All of these phenotype transformations of the initial
epithelial cell constitute epithelial-mesenchymal transitions
(EMT).
[0027] Thus, at step a) of the method, it is advantageous to use
metastatic cancer cells, preferably of epithelial origin, which can
be selected from established cell lines, or which can be selected
from primary culture of metastatic cancer cells, originating from a
cell sample or a tissue biopsy taken from a cancer patient.
[0028] Among metastatic cancer cell lines, it may be used tumour
cells having the capacity to form metastases and that are selected
from among the following cell lines: SW620 (ATCC no CCL-227),
SKCo-1 (ATCC no HTB-39), CoLo205 (ATCC no CCL-222), and HCT116
(ATCC no CCL-247) rendered p21-deficient.
[0029] At step a) of the method, the number of cells plated per
culture dish varies depending on the dish used and, where
appropriate, the type of cells used, in particular according to the
proliferation capacity of the cancer cells used. As an indication,
when the cancer cells are plated on conventional 96-well culture
plates, 2000 to 30 000 cells can be plated per culture well,
preferably 5000 to 20 000 cells per culture well. Those skilled in
the art will use their general knowledge to adapt the number of
cells, depending on the type of culture container and the type of
cancerous cells used.
[0030] Thus, the invention method is particularly suitable for
screening candidate substances having the ability to block the
metastatic capacity of cancerous cells derived from epithelial
cells. Thanks to the method of the invention, it is possible to
screen physiologically active antimetastatic substances likely to
be used in the production of drugs useful in the prevention or
treatment of cancers known to disseminate in the form of
metastases, especially cancers of epithelial cells such as breast
cancers, colorectal cancers, ovarian cancers, bladder cancers,
cancers of the neck of the womb, skin cancers including
basocellular carcinomas, stomach cancers, epithelial tumours of the
thymus, prostate cancers, testicles cancers, lungs cancers, throat
cancers, pancreas cancers, liver cancers, bile duct cancers, and
bladder cancers.
[0031] At step b) of the method, the cells are incubated with a
candidate substance or a combination of candidate substances to be
tested. In a combination of candidate substances to be tested, one
or more of these substances may already be known for their
antimetastatic potency. For example, it is possible to use, in a
combination of candidate substances to be tested, at least one
substance with a known antimetastatic potency, in order to
determine the existence of any possible synergy of action between
the substance with known activity and the other substance or
substances of the said combination of substances.
[0032] At step b), the cell culture is brought into contact with
the substance or substances to be tested for a variable time
period, which, by way of illustration, can vary from 30 minutes to
72 hours.
[0033] In general, step b) is carried out by using a series of cell
cultures, for example in microplate wells of a known type of cell
culture, and incubating each well or each subset of wells with
variable concentrations of the substance(s) to be tested.
Advantageously, one well or subset of wells is incubated with the
culture medium only and serves as a negative control.
Advantageously, one well or subset of wells is incubated with a
known concentration or series of concentrations of a substance
known for its antimetastatic potency and serves as a positive
control.
[0034] At step c) of the method, the detection of the presence of
E-cadherin at the cell membrane surface of the cells in culture can
be carried out by those skilled in the art using any known
detection technique.
[0035] According to a certain embodiment, step c) of detection is
carried out on the cells in culture, without prior treatment of the
cell cultures.
[0036] According to another embodiment, the detection step c) is
carried out after prior treatment of the cells in culture,
preferably a fixation treatment of the cells in culture, using any
cell fixing agent or any combination of cell fixing agents known to
those skilled in the art. By way of illustration, at the beginning
of step c) of the method, the cells in culture are fixed with
formalin, prior to the actual step of E-cadherin detection. The
cells are advantageously incubated with the fixing agent for an
appropriate period of time, depending on the agent used, for
example for a time varying from 1 minute to 1 hour. For formalin,
an incubation time period with the fixing agent varying from 5
minutes to 30 minutes, preferably from 5 minutes to 15 minutes, is
suitable.
[0037] Advantageously, the detection of the presence of
extramembranous E-cadherin is carried out, at step c) of the
method, by bringing the cells obtained at the end of step b) into
contact with a ligand compound of E-cadherin.
[0038] When a cell fixing agent is used, it is possible, in a
particular embodiment, to treat the fixed cells with saturation
proteins in suspension in a buffer, such as serum albumin,
including bovine serum albumin (BSA), for a duration of 2 to 30
minutes, for example 10 minutes, in order to avoid, or at least
reduce, the non-specific binding of the ligand compound of
E-cadherin.
[0039] The term "ligand" compound of E-cadherin as used according
to the invention is understood to mean a compound that has the
capacity to bind specifically to the E-cadherin expressed on the
cell membranes. In general, said "ligand" compound binds to the
extracellular domain of E-cadherin.
[0040] In E-cadherin with the sequence SEQ ID No 1, the
extracellular peptide portion starts with the amino acid at
position 155 and ends with the amino acid at position 697 of the
sequence SEQ ID No 1.
[0041] In general, a ligand compound that binds to E-cadherin is
selected from among nucleic acids or polypeptides that recognise
E-cadherin.
[0042] By way of illustration, a nucleic acid E-cadherin ligand can
easily be selected by those skilled in the art using the SELEX
technique. The SELEX method is a method that makes it possible,
from a set of nucleic acids with distinct starting sequences, to
select one or several nucleic acids that bind specifically to a
target molecule of interest, for example a polypeptide target of
interest. To implement the SELEX method in order to select a
nucleic acid ligand of E-cadherin, those skilled in the art will
advantageously refer to the content of the U.S. Pat. No. 5,475,096
and U.S. Pat. No. 5,270,163.
[0043] By way of illustration, a polypeptide ligand of E-cadherin
can easily be selected by those skilled in the art, for example
using well known double-hybrid techniques, notably described in
U.S. Pat. No. 5,667,973.
[0044] Also, a polypeptide ligand of E-cadherin can easily be
selected with the help of techniques that use an optical biosensor,
such as those described by Edwards and Leatherbarrow (1997,
Analytical Biochemistry, 246: 1-6) and also by Szabo et al. (1995,
Curr. Opinion Struct. Biol., 5(5): 699-705). This technique makes
it possible to detect interactions between two molecules in real
time, without needing prior labelling. This technique is based on
the phenomenon of surface plasmon resonance (or SPR). By way of a
brief explanation, a first partner molecule, for example
E-cadherin, is immobilised on a surface such as a carboxymethyl
dextran matrix. Then, a second partner molecule, for example a test
polypeptide, is incubated with the first partner molecule, then SPR
is used to detect the binding or absence of binding, and where
appropriate the degree of binding, between the two molecules, for
example between E-cadherin and the test polypeptide.
[0045] One example of a polypeptide that is a ligand of E-cadherin
is betacatenin, for example the beta-catenin with amino acid
sequence SEQ ID No 2.
[0046] Another example of a polypeptide ligand of E-cadherin is an
antibody specifically directed against E-cadherin, and more
specifically an antibody directed against the extra-cellular domain
of E-cadherin.
[0047] The antibodies according to the invention are polyclonal or
monoclonal antibodies.
[0048] Preferably, polyclonal antibodies are selected from
among:
[0049] (i) a whole antibody fraction purified from the serum of a
mammal immunised against E-cadherin;
[0050] (ii) a purified fraction of monospecific polyclonal
antibodies directed against E-cadherin;
[0051] (iii) Fab or F(ab)'2 fragments prepared from polyclonal
antibodies (i) and (ii) above.
[0052] Obtaining a whole antibody fraction (i) purified from the
serum of a mammal immunised against E-cadherin preferably comprises
the following steps:
[0053] a) injecting a mammal with a compound comprising E-cadherin
or a polypeptide containing the extra-cellular domain of
E-cadherin, combined with at least one adjuvant of immunity;
[0054] b) recovering the immune serum from the said mammal, which
contains the antibodies directed against E-cadherin,
[0055] c) purifying an antibody fraction from the immune serum.
[0056] Each of these steps is described in more detail below. The
recovery of the immune serum is carried out in a manner known to
those skilled in the art, for example by separating the serum by
centrifuging a whole blood sample. The purification of an antibody
fraction is carried out starting from the immune serum of an
immunised patient, for example by affinity chromatography,
precipitation with ammonium sulphate, ion exchange chromatography,
gel filtration, Protein A/G chromatography on a column, affinity
chromatography, or immunoaffinity chromatography.
[0057] A purified fraction of monospecific polyclonal antibodies
(ii) directed against E-cadherin can be obtained by carrying out
affinity chromatography on a whole antibody fraction (i) purified
from the immune serum of a mammal immunised against human
E-cadherin, by binding the E-cadherin or an antigen motif of
E-cadherin to the column.
[0058] The purification of F(ab').sub.2 fragments from polyclonal
antibodies described above or from immune serum or blood plasma can
be carried out according to the method described in the patent
application US2002/0164327, comprising a step of pepsin digestion
of blood plasma or serum and steps of separation and purification
until F(ab').sub.2 fragments are obtained, free from albumin,
entire antibodies, and substantially free from pyrogenic
substances.
[0059] The isolation of F(ab) and F(ab').sub.2 fractions makes it
possible to obtain specific advantages, such as the action of
binding to E-cadherin without interacting with other effector
molecules of the immune system.
[0060] The F(ab) fragments can be obtained by a similar method,
consisting of papain digestion of the immune serum, plasma or
purified fractions of polyclonal antibodies (i), (ii) and (iii)
from a mammal immunised against E-cadherin.
[0061] Alternatively, the antibodies are monoclonal and are
selected from:
[0062] (i) antibodies produced by cells originating from the cell
fusion of (a) B cells of a mammal immunised against human
E-cadherin and (b) cells from an antibody-producing cell line, such
as myeloma cells;
[0063] (ii) antibodies produced by cells transfected or transformed
by DNA encoding an immunoglobulin, said DNA having been previously
isolated from the DNA of a B cell of a mammal immunised against
human E-cadherin;
[0064] (iii) Fab or F(ab)'.sub.2 fragments prepared from polyclonal
antibodies (i) and (ii) above;
[0065] (iv) ScFv fragments.
[0066] According to the invention, it is possible to use any one of
the many commercially available monoclonal or polyclonal antibodies
that recognise human E-cadherin. Notably, it is possible to use the
anti-E-cadherin antibodies marketed by Zymed, notably the
antibodies contained in the ELISA kit referenced no 99-1700. It is
also possible to use the anti-E-cadherin monoclonal antibodies
marketed by Axxora under the references no ECCD-2, HECD-1 or no
SHE78-7, or those marketed by Biocare Medical under the references
no CM170A, CM170B, CM170C and PM170AA, or those marketed by Serotec
under reference no MCA1482, or those marketed by Acris Antibodies
GmbH under reference no SM1531P, or those marketed by under
reference no MAB3199, or those marketed by DbioSys under reference
no Mob 193. It is also possible to use anti-E-cadherin polyclonal
antibodies marketed by Novus Biologicals under the reference no ab
15148, or those marketed by AbCan under the reference no
ab14015.
[0067] Preferably polyclonal or monoclonal antibodies that bind
selectively to the extracellular portion of E-cadherin are
used.
[0068] Advantageously, the anti-E-cadherin monoclonal antibody
marketed by Zymed under the reference no 13-1700 is used. This
monoclonal antibody recognises the EC1 domain of the extracellular
portion of E-cadherin, which is located from the amino acid in
position 157 to the amino acid in position 262 of the amino acid
sequence SEQ ID No 1.
[0069] In certain embodiments of step c) of the method, a secondary
ligand compound is used that has the capacity to bind to the
E-cadherin ligand compound, said secondary ligand compound being
labelled with a detectable molecule.
[0070] In certain embodiments of step c) of the method, the
detection of E-cadherin is achieved by bringing the cell culture
into contact with a secondary ligand compound labelled with a
detectable molecule, said labelled secondary compound having the
capacity to bind to the E-cadherin ligand compound. According to
this embodiment, the detection of the complexes formed between the
E-cadherin present on the surface of the cell membrane and the
E-cadherin ligand compound is carried out by detection of the
signal emitted by the labelled secondary compound that binds to the
ligand compound involved in the (E-cadherin/E-cadherin ligand
compound) complexes. By way of illustration of such an embodiment,
the labelled secondary compound may consist of a labelled antibody
directed specifically against the E-cadherin ligand compound.
[0071] In a particular embodiment of the method, the E-cadherin
ligand compound is labelled with a detectable molecule.
[0072] Depending on the type of detectable molecule, the presence
of E-cadherin on the cell membranes can be monitored by known
techniques, notably techniques using measurement of fluorescence
with a flow cytometer, a microplate reader, a fluorimeter, or a
fluorescence microscope, or by colorimetric, enzymatic, radioactive
measurement or immunological techniques. By way of illustration,
the detectable molecule can be chosen from among an antigen, a
fluorescent protein, a radioactive protein, a receptor protein such
as biotin, or a protein having enzymatic activity.
[0073] When the detectable protein is an antigen, it can be any
type of antigen, so long as the specific antibodies for this
antigen are readily available or, alternatively, can be prepared
according to any method for preparing antibodies, including
polyclonal or monoclonal antibodies, well known to those skilled in
the art. Preferably, in this case, the detectable molecule consists
of a small sized antigen. So, preferably, a peptide chain of 7 to
100 amino acids in length, more preferably 7 to 50 amino acids in
length, or better still, 7 to 30 amino acids in length, for example
10 amino acids in length, is used as the antigen. By way of
illustration, the HA antigen with sequence
[NH.sub.2-YPYDVPDYA-COOH] SEQ ID No 3, or a FLAG antigen with
sequence [NH.sub.2-DYKDDDDK-COOH] SEQ ID No 4 (FLAG monomer) or
with sequence [NH.sub.2-MDYKDHDGDYKDHDIDYKDDDDK-COOH] SEQ ID No 5
(FLAG trimer) or an MYC antigen with sequence
[NH.sub.2-MEQKLISEEDL-COOH] SEQ ID No 6 can be used. In this case,
to quantify the detectable molecule at step (c) of the method, an
antibody specific to the antigen contained in the ligand compound
is used, this antibody being directly or indirectly labelled. Then
the quantification is done by measuring the detectable signal
produced by the complexes formed in the cell preparations, between
the labelled antibody and the E-cadherin ligand compound comprising
the antigen marker.
[0074] When the detectable protein is an intrinsically fluorescent
protein, it is notably selected from the GFP protein or one of its
derivatives, the YFP protein or one of its derivatives, and the
dsRED protein. For instance, among the proteins derived from the
GFP protein, one of the proteins known by the names GFPMut3, Venus,
Sapphire etc. can be used. For instance, one of the intrinsically
fluorescent proteins described in the U.S. Pat. No. 5,625,048, U.S.
Pat. No. 5,777,079, U.S. Pat. No. 5,804,387, U.S. Pat. No.
5,968,738, U.S. Pat. No. 5,994,077, U.S. Pat. No. 6,054,321, U.S.
Pat. No. 6,066,476, U.S. Pat. No. 6,077,707, U.S. Pat. No.
6,090,919, U.S. Pat. No. 6,124,128, U.S. Pat. No. 6,172,188, or the
European patents no EP 851 874 et EP 804 457 can be used.
[0075] When the detectable protein is an intrinsically fluorescent
protein, the detectable protein is quantified at step (b) of the
method by measuring the fluorescent signal emitted by the
fluorescent protein using any appropriate device. So, at step (b),
when the first detectable protein is a fluorescent protein, said
detectable protein is quantified by measuring the fluorescent
signal emitted by said protein.
[0076] When the detectable protein is a protein with enzymatic
activity, said detectable protein is chosen, for instance, from
luciferase and .beta.-lactamase. In this case, the detectable
molecule is quantified at step (c) of the method by measuring the
amount of compound or compounds produced by enzymatic conversion of
the substrate. When the product of enzymatic activity is coloured,
the measurement can be done by colorimetry. When the product of
enzymatic activity is fluorescent, the intensity of the fluorescent
signal emitted by said product is measured using any suitable
device for measuring fluorescence. Thus, in step (b), when the
first detectable molecule is a protein having enzymatic activity,
said detectable protein is quantified by measuring the quantity of
substrate modified by said protein, generally by measuring the
optical density at the wavelength of the substrate emission.
[0077] In certain embodiments of the method of the invention, the
ligand compound consists of a biotin coupled anti-E-cadherin
antibody or a secondary antibody directed against the mammal in
which the biotin coupled anti-E-cadherin antibody was produced. In
these particular embodiments, a labelled secondary compound
containing streptavidin can be used. An example illustrating such a
labelled secondary compound is a fusion protein between
streptavidin and a detectable molecule selected from the detectable
molecules defined above, including a detectable molecule consisting
of an enzyme. For example, a labelled secondary compound consisting
of a streptavidin molecule coupled or fused with horseradish
peroxidase or the peroxidase anti-peroxidase (PAP) soluble complex
system (marketed by SIGMA, P3039) can be used. According to this
last system, the secondary compound is complex. This complex
secondary compound comprises (i) an antibody directed against an
anti-E-cadherin antibody, and more specifically against the Fc
portion of the said anti-E-cadherin antibody and (ii) an antibody
directed against a peroxidase, such as horseradish peroxidase or
soy peroxidase, the said antibody being complexed with the said
peroxidase, at the antigen recognition domain (CDR). In this
system, the antibody directed against the anti-E-cadherin antibody
can be for example a mouse anti-antibody, when the anti-E-cadherin
antibody consists of a mouse antibody. According to this system,
two peroxidase molecules are bound to the anti-peroxidase antibody,
which is a technical advantage and gives the method an increased
sensitivity threshold, compared with many other systems of
labelling and detection.
[0078] Thus, according to this system, the detection of the
E-cadherin exposed on the membrane surface of the cells can be
carried out using (i) an anti-E-cadherin antibody, to which is
bound (ii) an antibody directed against the anti-E-cadherin
antibody, to which is bound (iii) an anti-peroxidase antibody
complexed with peroxidase at its antigen recognition site
(CDR).
[0079] The presence of complexes between E-cadherin and a
peroxidase labelled E-cadherin ligand, fixed to the cell membrane
surface can be revealed by optical detection of the product
resulting from the conversion of a horseradish peroxidase
substrate, such as ortho-phenylene diamine (OPD), after the
labelled secondary compound has been brought into contact with the
E-cadherin/ligand complexes.
[0080] A further object of this invention is also a set or kit for
screening anticancer substances comprising:
a) tumour cells which do not express E-cadherin on their cell
membrane; b) a ligand compound of E-cadherin.
[0081] The tumour cells included in the kit of the invention can be
selected from among the tumour cells described in the present
specification.
[0082] Advantageously, the kit comprises tumour cells that have the
capacity to form metastases that are selected from among the
following cell lines: SW620 (ATCC no CCL-227), SKCo-1 (ATCC no
HTB-39), CoL0205 (ATCC no CCL-222), and HCT116 (ATCC no CCL-247)
rendered p21-deficient.
[0083] In a kit according to the invention, the E-cadherin ligand
compound may be one of the E-cadherin ligand compounds described in
the present specification.
[0084] Advantageously, an E-cadherin ligand compound is used that
binds to the extracellular portion of E-cadherin.
[0085] According to a particular embodiment of the above kit, the
E-cadherin ligand compound consists of an anti-E-cadherin
polyclonal or monoclonal antibody.
[0086] Biotin-coupled antibodies are encompassed in the set of
anti-E-cadherin antibodies likely to be included in a kit according
to the invention.
[0087] In certain embodiments of a screening kit of the invention,
said kit also comprises a secondary ligand compound of the type
previously described in the present specification. The said
secondary ligand compound can consist of a secondary ligand
compound that binds to the E-cadherin ligand compound, said
secondary ligand compound being labelled with a detectable
molecule.
[0088] Advantageously, when the E-cadherin ligand compound consists
of a biotin-coupled anti-E-cadherin antibody, the secondary ligand
compound is selected from among the compounds resulting from the
coupling between streptavidin and a detectable molecule, for
example between streptavidin and an enzyme. By way of illustration,
a compound resulting from the coupling between streptavidin and
horseradish peroxidase can be used as a secondary ligand
compound.
[0089] According to another embodiment of the kit according to the
invention, the secondary ligand compound consists of an antibody
directed against the anti-E-cadherin antibody, for example an
antibody directed against the anti-E-cadherin antibody that is
labelled with a detectable molecule.
[0090] According to a specific embodiment of an anti-E-cadherin
antibody labelled with a detectable molecule, an anti-E-cadherin
antibody is used, to which is bound (ii) an anti peroxidase
antibody that is recognised by the antibody directed against
anti-E-cadherin antibodies, the said antiperoxidase antibodies
being bound to two peroxidase molecules at their antigen binding
site (CDR).
[0091] This invention also relates to the use of a ligand compound
of the extracellular portion of E-cadherin for in vitro screening
of anticancer substances. Preferably, the ligand compound is used
in conjunction with a culture of tumour cells which do not express
E-cadherin on their cell membrane.
[0092] This invention also relates to the use of a ROCK
("Rho-associated coiled-coil forming protein serine/threonine
kinase") kinase inhibitor for the production of a pharmaceutical
composition directed to the prevention or treatment of a cancer,
notably a cancer selected from among those defined in the present
description. More particularly, a ROCK kinase protein inhibitor is
used for the production of an anti-metastatic drug.
[0093] A ROCK kinase inhibitor may be selected from the group
consisting of Y-27632 marketed by VWR INTERNATIONAL (REF: 688
000-5).
[0094] The present invention is also illustrated by the following
drawings and examples.
DRAWINGS
[0095] FIG. 1 illustrates the effect of the inhibitor Y-27632,
which is a ROCK kinase inhibitor, on the correct localisation of
E-cadherin on the intercellular junctions in several cancerous cell
lines. Figures A1 to A5: control cells without inhibitor. Figures
B1 to B5: cells incubated with the inhibitor Y-27632. Columns 1 and
2: non-metastatic cancer cells hct116 (1) and SW480 (2). Columns 3
to 5: metastatic cancerous cells SW620 (3), SKCo-1 (4) and CoL0205
(5).
[0096] FIG. 2 illustrates the effect of the treatment of metastatic
cells of the SW620 cell line by the inhibitor Y-27632 on the
spreading ability of the cells (FIG. 2A) and on the formation of
E-cadherin type adhesion junctions (FIG. 2B). In FIGS. 2 A and 2 B:
on the left: control cells without inhibitor; on the right: cells
incubated with Y-27632. On the x-axis: the percentage of flat cells
(FIG. 2A) or the percentage of cells forming E-cadherin type
intercellular junctions (FIG. 2B).
[0097] FIG. 3 illustrates a comparison of the effect of the
treatment with the inhibitor Y-27632 on the invasive potency of
normal colon cells from the cell line CoN (FIG. 3A) and metastatic
cells from the SW620 cell line (FIG. 3B). On the x-axis: migration
time in the presence or absence of Y-27632. On the y-axis: mean
number of cells per field having crossed through the reconstituted
cell matrix (microscope, OBJ.times.20).
EXAMPLES
Example 1
Identification of a Strict Correlation Between the Formation of
E-Cadherin Type Intercellular Junctions and the Reversion of Cancer
Cells to the Non-Metastatic Phenotype
[0098] A. Materials and Methods
1. Protocol for Immunofluorescent Labelling of E-Cadherin
[0099] 1--The cells are plated in 6-well plates, each well
containing 3 glass coverslips 10 mm in diameter. 2--Place the cells
in 0% Serum for 18 to 24 hours then treat them or not with Y27 10
.mu.M+PDGF 5 ng/ml for 36 to 48 h. 3--Fix the cells for 10 minutes
with formalin (3.7% formaldehyde in PBS). 4--Saturation, 10 minutes
PBS-BSA 5--Incubation of the primary antibody, diluted to 1:500 in
PBS-BSA, 2 hours at 37.degree. C. (Mouse anti E-cadherin, ZYMED,
ref: 13-1700) 6--2 rapid washes in PBS-0.1% Tween 7--Incubation of
the secondary antibody (Alexa Fluor.RTM. 488 F(ab').sub.2 fragment
of goat anti mouse IgG, Molecular Probes ref: A-11017), diluted to
1:2000 in PBS-BSA, 30 minutes at 37.degree. C. 8--2 rapid washes in
PBS-0.1% Tween 9--Mounting in Mowiol medium between the slide and
the coverslip.
2. Invasion Test
[0100] 1--On D-2, thaw the Matrigel at 4.degree. C. all night 2--On
D-1, measure the Matrigel into insert chambers: Put all the
necessary material on ice (Matrigel, culture medium, tips,
eppendorfs, etc. . . . ). Put the FluoroBlock inserts (FALCON, ref:
351152) in the 24-well plates (FALCON, ref: 353504). Dilute the
Matrigel to 2 mg/ml in cold serumless medium (if the cells are to
be subjected to a treatment X, include the product in the Matrigel,
e.g.: Y 27632) Aliquot 100 .mu.l of 2 mg/ml Matrigel per insert
avoiding creating bubbles. Leave O/N at 37.degree. C. in a humid
atmosphere (in an incubator) 3--On D day, plate the cells on the
Matrigel: First put 700 .mu.l of 10% serum medium in a 24-well
plate and transfer the inserts to this plate. Trypsinate the cells
(previously treated or not . . . ) and take them up in 2% serum
medium. Plate 50 000 cells per insert in 200 .mu.l of 2% serum
medium on the Matrigel (optionally put Y27632 into the plated
cells). 4--The migration time varies depending on the cell type but
generally allowing them to migrate for 8 hours fixing a point every
2 hours seems suitable. To fix them, transfer the inserts to a
24-well plate containing 1 ml of formalin (3.7% formaldehyde in
PBS), suck up the culture medium inside the chambers and also add
formalin (very important, prevents the cells from continuing to
migrate in the Matrigel). Incubate for 10 minutes. Wash 3 times
rapidly in PBS Then, label with propidium iodide by incubating the
inserts in 1 ml of propidium iodide (SIGMA, ref: P-4864) 1:500 in
PBS, O/N at 4.degree. C., in the dark.
3. Protocol for Labelling E-Cadherin in 96-Well Plates
[0101] 1--For the colorectal cell lines, plate about 10 000 cells
per well (in 96-well plates Falcon, ref: 353072). 2--Carry out the
necessary treatments (control, Y27, PDGF . . . for 48 hours) and
fix for 10 minutes in formalin (3.7% formaldehyde in PBS)
3--Saturation, 10 minutes PBS-BSA 4--Incubation of the primary
antibody, diluted to 1:500 in PBS-BSA, 2 hours at 37.degree. C.
(Mouse anti-E-cadherin, ZYMED, ref: 13-1700) 5--2 rapid washes in
PBS-0.1% Tween 6--Incubation with biotinylated anti-mouse Ab,
dilution 1:1000 in PBS-BSA, 30 minutes at 37.degree. C.,
(Anti-Mouse IgG, Heavy and light chain specific biotin conjugate,
CALBIOCHEM, ref: 401213) 7--2 rapid washes in PBS-0.1% Tween
8--Incubation with Streptavidin-HRP, dilution 1:1000 in PBS-BSA, 30
minutes at 37.degree. C., (ECL Streptavidin-Horseradish Peroxidase
conjugate, AMERSHAM BIOSCIENCES, ref: RPN1231) 9--2 rapid washes in
PBS-0.1% Tween
10--Revealing:
[0102] Dissolve one capsule of Phosphate-citrate buffer containing
sodium perborate" (SIGMA, ref: P4922) in 100 ml of deionised water.
This buffer must be used within 30 minutes of being reconstituted.
Dissolve tablets of o-Phenylenediamine (OPD) dihydrochloride
(SIGMA, ref: P6787) in this buffer to obtain a final concentration
of 0.4 mg/ml (1 tablet of 10 mg OPD in 40 ml of perborate buffer).
Put 100 .mu.l of OPD/Perborate per well and incubate at ambient
temperature for 5 minutes. Stop the reaction with 50 .mu.l of 3N
HCl.
Read the OD at 490 nm.
[0103] B. Results
[0104] It has been shown that the phenotype of SW620 metastatic
cells, that is a round phenotype associated with a lack of
E-cadherin type junctions and a high invasive power, can be made to
revert by a ROCK kinase inhibitor, Y-27632. This kinase is a
powerful migration activator and has already been involved in
invasive phenomena. It has been shown that treating cells from the
SW620 metastatic cell line with Y-27632 enhances the spreading
ability of these cells (FIG. 2A) and the formation of E-cadherin
dependent junctions (FIG. 1B and FIG. 2B). It has been shown that
treating these cells with Y-27632 also makes it possible to
drastically reduce their invasive capacity. After treatment with
Y-27632, the SW620 metastatic cells have a very low level of
invasion, comparable to that of CoN normal colon cells (FIG.
3B).
[0105] As illustrated in FIG. 1, the treatment of the colorectal
cells with ROCK kinase inhibitor (Y-27632) causes correct
relocation of E-cadherin at the junctions of the metastatic cell
lines (SW620, SKCo-1 and CoLo205 cell lines). FIG. 1A illustrates
the location of E-cadherin in different colorectal control cell
lines. FIG. 1B illustrates the location of E-cadherin in different
colorectal cell lines treated with ROCK kinase inhibitor (Y-27632,
10 .mu.M for 48 hours).
[0106] As illustrated in FIG. 2, treating cells from the SW620
metastatic cell line with ROCK kinase inhibitor (Y-27632) leads to
the flattening of these cells and the formation of E-cadherin type
junctions. In FIG. 2A, 30% of the SW620 control cells exhibit a
flat phenotype and 70% a round phenotype. After treatment with
Y-27632, 90% of the cells are flat and only 10% retain a round
phenotype. In FIG. 2B, 22% of SW620 control cells are capable of
forming junctions. After treatment with Y-27632, 52% of the cells
are capable of forming E-cadherin type junctions.
[0107] In conclusion, the E-cadherin dependent junction forming
tests (FIG. 2) carried out in parallel with the invasion tests
(FIG. 3) have made it possible to show, in the model of SW620
metastatic colon cells, that a strict correlation exists between
the ability to re-form E-cadherin type junctions and a decrease in
the invasive capacity.
Example 2
Illustration of an Embodiment of the Screening Method According to
the Invention
[0108] 1--Plate about 10 000 cells per well for the colorectal cell
lines in Falcon 96-well plates, (ref: 3530072). 2--Carry out the
necessary treatments (control, Y27, PDGF . . . for 48 hours) and
fix for 10 minutes in formalin (3.7% formaldehyde in PBS)
3--Saturation, 10 minutes PBS-BSA 4--Incubation of the primary
antibody, diluted to 1:500 in PBS-BSA, 2 hours at 37.degree. C.
(Mouse anti-E-cadherin, ZYMED, ref: 13-1700) 5--2 rapid washes with
PBS-0.1% Tween. 6--Incubation of the biotinylated anti-mouse
antibodies, dilution 1:1000 in PBS-BSA, 30 minutes at 37.degree. C.
(Anti-Mouse IgG, Heavy and light chain specific biotin conjugate,
CALBIOCHEM, ref: 401213). 7--2 rapid washes with PBS-0.1% Tween.
8--Incubation Streptavidin-HRP, dilution 1:1000 in PBS-BSA, 30
minutes at 37.degree. C., (ECL Streptavidin-Horseradish Peroxidase
conjugate, AMERSHAM BIOSCIENCES, ref: RPN1231) 9--2 rapid washes
with PBS-0.1% Tween.
10--Revealing:
[0109] a) Dissolve one capsule of "Phosphate-citrate buffer
containing sodium perborate" (SIGMA, ref: P4922) in 100 ml of
deionised water. This buffer must be used within 30 minutes of
being reconstituted . b) Dissolve tablets of o-Phenylenediamine
(OPD) dihydrochloride (SIGMA, ref: P6787) in this buffer to obtain
a final concentration of 0.5 mg/ml (1 tablet of 10 mg OPD in 40 ml
of perborate buffer). c) Put 100 .mu.l of OPD/perborate per well
and incubate at ambient temperature for 5 minutes. d) Stop the
reaction with 50 .mu.l of 3N HCl. e) Read the OD at 490 nm.
Sequence CWU 1
1
61882PRTHomo sapiens 1Met Gly Pro Trp Ser Arg Ser Leu Ser Ala Leu
Leu Leu Leu Leu Gln1 5 10 15Val Ser Ser Trp Leu Cys Gln Glu Pro Glu
Pro Cys His Pro Gly Phe 20 25 30Asp Ala Glu Ser Tyr Thr Phe Thr Val
Pro Arg Arg His Leu Glu Arg 35 40 45Gly Arg Val Leu Gly Arg Val Asn
Phe Glu Asp Cys Thr Gly Arg Gln 50 55 60Arg Thr Ala Tyr Phe Ser Leu
Asp Thr Arg Phe Lys Val Gly Thr Asp65 70 75 80Gly Val Ile Thr Val
Lys Arg Pro Leu Arg Phe His Asn Pro Gln Ile 85 90 95His Phe Leu Val
Tyr Ala Trp Asp Ser Thr Tyr Arg Lys Phe Ser Thr 100 105 110Lys Val
Thr Leu Asn Thr Val Gly His His His Arg Pro Pro Pro His 115 120
125Gln Ala Ser Val Ser Gly Ile Gln Ala Glu Leu Leu Thr Phe Pro Asn
130 135 140Ser Ser Pro Gly Leu Arg Arg Gln Lys Arg Asp Trp Val Ile
Pro Pro145 150 155 160Ile Ser Cys Pro Glu Asn Glu Lys Gly Pro Phe
Pro Lys Asn Leu Val 165 170 175Gln Ile Lys Ser Asn Lys Asp Lys Glu
Gly Lys Val Phe Tyr Ser Ile 180 185 190Thr Gly Gln Gly Ala Asp Thr
Pro Pro Val Gly Val Phe Ile Ile Glu 195 200 205Arg Glu Thr Gly Trp
Leu Lys Val Thr Glu Pro Leu Asp Arg Glu Arg 210 215 220Ile Ala Thr
Tyr Thr Leu Phe Ser His Ala Val Ser Ser Asn Gly Asn225 230 235
240Ala Val Glu Asp Pro Met Glu Ile Leu Ile Thr Val Thr Asp Gln Asn
245 250 255Asp Asn Lys Pro Glu Phe Thr Gln Glu Val Phe Lys Gly Ser
Val Met 260 265 270Glu Gly Ala Leu Pro Gly Thr Ser Val Met Glu Val
Thr Ala Thr Asp 275 280 285Ala Asp Asp Asp Val Asn Thr Tyr Asn Ala
Ala Ile Ala Tyr Thr Ile 290 295 300Leu Ser Gln Asp Pro Glu Leu Pro
Asp Lys Asn Met Phe Thr Ile Asn305 310 315 320Arg Asn Thr Gly Val
Ile Ser Val Val Thr Thr Gly Leu Asp Arg Glu 325 330 335Ser Phe Pro
Thr Tyr Thr Leu Val Val Gln Ala Ala Asp Leu Gln Gly 340 345 350Glu
Gly Leu Ser Thr Thr Ala Thr Ala Val Ile Thr Val Thr Asp Thr 355 360
365Asn Asp Asn Pro Pro Ile Phe Asn Pro Thr Thr Tyr Lys Gly Gln Val
370 375 380Pro Glu Asn Glu Ala Asn Val Val Ile Thr Thr Leu Lys Val
Thr Asp385 390 395 400Ala Asp Ala Pro Asn Thr Pro Ala Trp Glu Ala
Val Tyr Thr Ile Leu 405 410 415Asn Asp Asp Gly Gly Gln Phe Val Val
Thr Thr Asn Pro Val Asn Asn 420 425 430Asp Gly Ile Leu Lys Thr Ala
Lys Gly Leu Asp Phe Glu Ala Lys Gln 435 440 445Gln Tyr Ile Leu His
Val Ala Val Thr Asn Val Val Pro Phe Glu Val 450 455 460Ser Leu Thr
Thr Ser Thr Ala Thr Val Thr Val Asp Val Leu Asp Val465 470 475
480Asn Glu Ala Pro Ile Phe Val Pro Pro Glu Lys Arg Val Glu Val Ser
485 490 495Glu Asp Phe Gly Val Gly Gln Glu Ile Thr Ser Tyr Thr Ala
Gln Glu 500 505 510Pro Asp Thr Phe Met Glu Gln Lys Ile Thr Tyr Arg
Ile Trp Arg Asp 515 520 525Thr Ala Asn Trp Leu Glu Ile Asn Pro Asp
Thr Gly Ala Ile Ser Thr 530 535 540Arg Ala Glu Leu Asp Arg Glu Asp
Phe Glu His Val Lys Asn Ser Thr545 550 555 560Tyr Thr Ala Leu Ile
Ile Ala Thr Asp Asn Gly Ser Pro Val Ala Thr 565 570 575Gly Thr Gly
Thr Leu Leu Leu Ile Leu Ser Asp Val Asn Asp Asn Ala 580 585 590Pro
Ile Pro Glu Pro Arg Thr Ile Phe Phe Cys Glu Arg Asn Pro Lys 595 600
605Pro Gln Val Ile Asn Ile Ile Asp Ala Asp Leu Pro Pro Asn Thr Ser
610 615 620Pro Phe Thr Ala Glu Leu Thr His Gly Ala Ser Ala Asn Trp
Thr Ile625 630 635 640Gln Tyr Asn Asp Pro Thr Gln Glu Ser Ile Ile
Leu Lys Pro Lys Met 645 650 655Ala Leu Glu Val Gly Asp Tyr Lys Ile
Asn Leu Lys Leu Met Asp Asn 660 665 670Gln Asn Lys Asp Gln Val Thr
Thr Leu Glu Val Ser Val Cys Asp Cys 675 680 685Glu Gly Ala Ala Gly
Val Cys Arg Lys Ala Gln Pro Val Glu Ala Gly 690 695 700Leu Gln Ile
Pro Ala Ile Leu Gly Ile Leu Gly Gly Ile Leu Ala Leu705 710 715
720Leu Ile Leu Ile Leu Leu Leu Leu Leu Phe Leu Arg Arg Arg Ala Val
725 730 735Val Lys Glu Pro Leu Leu Pro Pro Glu Asp Asp Thr Arg Asp
Asn Val 740 745 750Tyr Tyr Tyr Asp Glu Glu Gly Gly Gly Glu Glu Asp
Gln Asp Phe Asp 755 760 765Leu Ser Gln Leu His Arg Gly Leu Asp Ala
Arg Pro Glu Val Thr Arg 770 775 780Asn Asp Val Ala Pro Thr Leu Met
Ser Val Pro Arg Tyr Leu Pro Arg785 790 795 800Pro Ala Asn Pro Asp
Glu Ile Gly Asn Phe Ile Asp Glu Asn Leu Lys 805 810 815Ala Ala Asp
Thr Asp Pro Thr Ala Pro Pro Tyr Asp Ser Leu Leu Val 820 825 830Phe
Asp Tyr Glu Gly Ser Gly Ser Glu Ala Ala Ser Leu Ser Ser Leu 835 840
845Asn Ser Ser Glu Ser Asp Lys Asp Gln Asp Tyr Asp Tyr Leu Asn Glu
850 855 860Trp Gly Asn Arg Phe Lys Lys Leu Ala Asp Met Tyr Gly Gly
Gly Glu865 870 875 880Asp Asp2781PRTHomo sapiens 2Met Ala Thr Gln
Ala Asp Leu Met Glu Leu Asp Met Ala Met Glu Pro1 5 10 15Asp Arg Lys
Ala Ala Val Ser His Trp Gln Gln Gln Ser Tyr Leu Asp 20 25 30Ser Gly
Ile His Ser Gly Ala Thr Thr Thr Ala Pro Ser Leu Ser Gly 35 40 45Lys
Gly Asn Pro Glu Glu Glu Asp Val Asp Thr Ser Gln Val Leu Tyr 50 55
60Glu Trp Glu Gln Gly Phe Ser Gln Ser Phe Thr Gln Glu Gln Val Ala65
70 75 80Asp Ile Asp Gly Gln Tyr Ala Met Thr Arg Ala Gln Arg Val Arg
Ala 85 90 95Ala Met Phe Pro Glu Thr Leu Asp Glu Gly Met Gln Ile Pro
Ser Thr 100 105 110Gln Phe Asp Ala Ala His Pro Thr Asn Val Gln Arg
Leu Ala Glu Pro 115 120 125Ser Gln Met Leu Lys His Ala Val Val Asn
Leu Ile Asn Tyr Gln Asp 130 135 140Asp Ala Glu Leu Ala Thr Arg Ala
Ile Pro Glu Leu Thr Lys Leu Leu145 150 155 160Asn Asp Glu Asp Gln
Val Val Val Asn Lys Ala Ala Val Met Val His 165 170 175Gln Leu Ser
Lys Lys Glu Ala Ser Arg His Ala Ile Met Arg Ser Pro 180 185 190Gln
Met Val Ser Ala Ile Val Arg Thr Met Gln Asn Thr Asn Asp Val 195 200
205Glu Thr Ala Arg Cys Thr Ala Gly Thr Leu His Asn Leu Ser His His
210 215 220Arg Glu Gly Leu Leu Ala Ile Phe Lys Ser Gly Gly Ile Pro
Ala Leu225 230 235 240Val Lys Met Leu Gly Ser Pro Val Asp Ser Val
Leu Phe Tyr Ala Ile 245 250 255Thr Thr Leu His Asn Leu Leu Leu His
Gln Glu Gly Ala Lys Met Ala 260 265 270Val Arg Leu Ala Gly Gly Leu
Gln Lys Met Val Ala Leu Leu Asn Lys 275 280 285Thr Asn Val Lys Phe
Leu Ala Ile Thr Thr Asp Cys Leu Gln Ile Leu 290 295 300Ala Tyr Gly
Asn Gln Glu Ser Lys Leu Ile Ile Leu Ala Ser Gly Gly305 310 315
320Pro Gln Ala Leu Val Asn Ile Met Arg Thr Tyr Thr Tyr Glu Lys Leu
325 330 335Leu Trp Thr Thr Ser Arg Val Leu Lys Val Leu Ser Val Cys
Ser Ser 340 345 350Asn Lys Pro Ala Ile Val Glu Ala Gly Gly Met Gln
Ala Leu Gly Leu 355 360 365His Leu Thr Asp Pro Ser Gln Arg Leu Val
Gln Asn Cys Leu Trp Thr 370 375 380Leu Arg Asn Leu Ser Asp Ala Ala
Thr Lys Gln Glu Gly Met Glu Gly385 390 395 400Leu Leu Gly Thr Leu
Val Gln Leu Leu Gly Ser Asp Asp Ile Asn Val 405 410 415Val Thr Cys
Ala Ala Gly Ile Leu Ser Asn Leu Thr Cys Asn Asn Tyr 420 425 430Lys
Asn Lys Met Met Val Cys Gln Val Gly Gly Ile Glu Ala Leu Val 435 440
445Arg Thr Val Leu Arg Ala Gly Asp Arg Glu Asp Ile Thr Glu Pro Ala
450 455 460Ile Cys Ala Leu Arg His Leu Thr Ser Arg His Gln Glu Ala
Glu Met465 470 475 480Ala Gln Asn Ala Val Arg Leu His Tyr Gly Leu
Pro Val Val Val Lys 485 490 495Leu Leu His Pro Pro Ser His Trp Pro
Leu Ile Lys Ala Thr Val Gly 500 505 510Leu Ile Arg Asn Leu Ala Leu
Cys Pro Ala Asn His Ala Pro Leu Arg 515 520 525Glu Gln Gly Ala Ile
Pro Arg Leu Val Gln Leu Leu Val Arg Ala His 530 535 540Gln Asp Thr
Gln Arg Arg Thr Ser Met Gly Gly Thr Gln Gln Gln Phe545 550 555
560Val Glu Gly Val Arg Met Glu Glu Ile Val Glu Gly Cys Thr Gly Ala
565 570 575Leu His Ile Leu Ala Arg Asp Val His Asn Arg Ile Val Ile
Arg Gly 580 585 590Leu Asn Thr Ile Pro Leu Phe Val Gln Leu Leu Tyr
Ser Pro Ile Glu 595 600 605Asn Ile Gln Arg Val Ala Ala Gly Val Leu
Cys Glu Leu Ala Gln Asp 610 615 620Lys Glu Ala Ala Glu Ala Ile Glu
Ala Glu Gly Ala Thr Ala Pro Leu625 630 635 640Thr Glu Leu Leu His
Ser Arg Asn Glu Gly Val Ala Thr Tyr Ala Ala 645 650 655Ala Val Leu
Phe Arg Met Ser Glu Asp Lys Pro Gln Asp Tyr Lys Lys 660 665 670Arg
Leu Ser Val Glu Leu Thr Ser Ser Leu Phe Arg Thr Glu Pro Met 675 680
685Ala Trp Asn Glu Thr Ala Asp Leu Gly Leu Asp Ile Gly Ala Gln Gly
690 695 700Glu Pro Leu Gly Tyr Arg Gln Asp Asp Pro Ser Tyr Arg Ser
Phe His705 710 715 720Ser Gly Gly Tyr Gly Gln Asp Ala Leu Gly Met
Asp Pro Met Met Glu 725 730 735His Glu Met Gly Gly His His Pro Gly
Ala Asp Tyr Pro Val Asp Gly 740 745 750Leu Pro Asp Leu Gly His Ala
Gln Asp Leu Met Asp Gly Leu Pro Pro 755 760 765Gly Asp Ser Asn Gln
Leu Ala Trp Phe Asp Thr Asp Leu 770 775 78039PRTArtificial
Sequencesynthetic polypeptide 3Tyr Pro Tyr Asp Val Pro Asp Tyr Ala1
548PRTArtificial Sequencesynthetic polypeptide 4Asp Tyr Lys Asp Asp
Asp Asp Lys1 5523PRTArtificial Sequencesynthetic polypeptide 5Met
Asp Tyr Lys Asp His Asp Gly Asp Tyr Lys Asp His Asp Ile Asp1 5 10
15Tyr Lys Asp Asp Asp Asp Lys 20611PRTArtificial Sequencesynthetic
polypeptide 6Met Glu Gln Lys Leu Ile Ser Glu Glu Asp Leu1 5 10
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