U.S. patent application number 12/760926 was filed with the patent office on 2010-12-16 for use of hydrogenotrophic acetogenic strains for preventing or treating digestive disorders.
This patent application is currently assigned to INSTITUT NATIONAL DE LA RECHERCHE AGRONOMIQUE (INRA). Invention is credited to Annick Bernalier, Michel Renaud.
Application Number | 20100316617 12/760926 |
Document ID | / |
Family ID | 8850107 |
Filed Date | 2010-12-16 |
United States Patent
Application |
20100316617 |
Kind Code |
A1 |
Renaud; Michel ; et
al. |
December 16, 2010 |
USE OF HYDROGENOTROPHIC ACETOGENIC STRAINS FOR PREVENTING OR
TREATING DIGESTIVE DISORDERS
Abstract
A method of modulating the microbial balance of the digestive
ecosystem in a mammal comprising administering to a mammal in need
thereof a composition comprising at least one nonpathogenic,
hydrogenotrophic, acetogenic bacterial strain, along with a
pharmaceutical and related methods, are described.
Inventors: |
Renaud; Michel; (Le Cendre,
FR) ; Bernalier; Annick; (La Roche-Blanche,
FR) |
Correspondence
Address: |
ARENT FOX LLP
1050 CONNECTICUT AVENUE, N.W., SUITE 400
WASHINGTON
DC
20036
US
|
Assignee: |
INSTITUT NATIONAL DE LA RECHERCHE
AGRONOMIQUE (INRA)
Paris
FR
|
Family ID: |
8850107 |
Appl. No.: |
12/760926 |
Filed: |
April 15, 2010 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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10275706 |
Feb 6, 2003 |
7749494 |
|
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PCT/FR2001/001426 |
May 11, 2001 |
|
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12760926 |
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Current U.S.
Class: |
424/93.41 ;
424/93.4; 424/93.44; 426/61; 435/252.1; 435/6.11; 435/6.15 |
Current CPC
Class: |
A61P 1/00 20180101; Y10S
435/822 20130101; A61P 1/04 20180101; A61K 35/742 20130101; A61K
35/747 20130101 |
Class at
Publication: |
424/93.41 ;
426/61; 424/93.4; 424/93.44; 435/252.1; 435/6 |
International
Class: |
A61K 35/74 20060101
A61K035/74; A23L 1/30 20060101 A23L001/30; C12N 1/20 20060101
C12N001/20; C12Q 1/68 20060101 C12Q001/68; A61P 1/00 20060101
A61P001/00 |
Foreign Application Data
Date |
Code |
Application Number |
May 11, 2000 |
FR |
00/06009 |
Claims
1-19. (canceled)
20. A method of modulating the microbial balance of the digestive
ecosystem in a mammal comprising administering to a mammal in need
thereof a composition comprising at least one nonpathogenic,
hydrogenotrophic, acetogenic bacterial strain.
21. The method of claim 20, wherein at least one of said
nonpathogenic, hydrogenotrophic, actogenic bacterial strain is an
autologous strain of said mammal.
22. The method of claim 20, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain is
viable in the digestive tract.
23. The method of claim 20, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain
belongs to the Ruminococcus, Clostridium or Streptococcus
genus.
24. The method of claim 23, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain
belongs to the species Ruminococcus hydrogenotrophicus.
25. The method of claim 20, wherein said mammal is human.
26. The method of claim 20, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain is
administered in a form which allows it to be active in the
colon.
27. The method of claim 20, wherein said composition is
administered orally or rectally.
28. The method of claim 20, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain is
packaged in an anaerobic environment.
29. The method of claim 20, wherein said composition comprises at
least one additive which promotes the activity of the at least one
strain in the digestive environment.
30. The method of claim 20, wherein said composition also comprises
a pharmaceutically acceptable carrier.
31. A pharmaceutical or food composition, comprising at least one
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain.
32. The composition of claim 31, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain
belongs to the Ruminococcus, Clostridium or Streptococcus
genus.
33. The composition of claim 32, wherein at least one of said
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain
belongs to the species Ruminococcus hydrogenotrophicus.
34. The composition of claim 33, comprising at least one additive
which promotes the activity of the at least one strain in the
digestive environment.
35. A method for specifically monitoring, in the digestive tract of
a mammal, a nonpathogenic, hydrogenotrophic, acetogenic bacterial
strain administered to said mammal as a way to modulate the
microbial balance of the digestive ecosystem of said mammal,
comprising the following steps: a. defining a nucleotide sequence
specific for said nonpathogenic, hydrogenotrophic, acetogenic
strain, b. contacting under hybridizing conditions said nucleic
acid probe with total nucleic acid extracted from fecal flora, or
with fecal bacteria from said digestive tract; and c. detecting
said hybridizing of said probe with said total nucleic acid.
36. A method for producing nonpathogenic, hydrogenotrophic,
acetogenic bacterial strain comprising the following steps: a.
growing said strain on a suitable medium, under conditions of
strict anaerobiosis, in the presence of a carbon-based substrate
and/or of H.sub.2/CO.sub.2 as energy source; b. recovering
bacterial cells of said strain; and c. packaging said bacterial
cells.
37. A method for specifically monitoring, in the digestive tract of
a mammal, a nonpathogenic hydrogenotrophic, acetogenic bacterial
strain administered to said mammal as a way to treat or prevent
gastrointestinal disorder in said mammal, comprising the following
steps: a. defining a nucleotide sequence specific for said
nonpathogenic, hydrogenotrophic, acetogenic strain, b. contacting
under hybridizing conditions said nucleic acid probe with total
nucleic acid extracted from fecal flora, or with fecal bacteria
from said digestive tract; and c. detecting said hybridizing of
said probe with said total nucleic acid.
38. The method of claim 37, wherein said gastrointestinal disorder
is irritable bowel syndrome or excessive flatulence, meteorism,
bloating or abdominal pain caused by gastrointestinal functional
disorders.
Description
[0001] The invention relates to the use of nonpathogenic,
hydrogenotrophic, acetogenic bacterial strains for preparing a
composition for treating or preventing gastrointestinal disorders
associated with digestive gas production, and/or for modulating the
microbial balance of the digestive ecosystem in a mammal.
[0002] The prevalence of functional digestive disorders or
functional gastrointestinal disorders in the Western population is
very high since it is estimated that they affect approximately 25%
to 30% of the adult population. In addition, these digestive
disorders represent one of the main causes of consultation in
gastroenterology (approximately 50% of consultations). The symptoms
of these intestinal disorders are diverse, such as modification of
intestinal transit, meteorism, abdominal pain and bloating. The
cause of these functional disorders for the moment remains poorly
defined, but it is estimated that the gases produced during
digestion in the colon play an important role in generating certain
symptoms such as flatulence excess, abdominal distension (bloating)
and associated pain. Some treatments have been proposed, for
instance active charcoal, simethicone, smectite, antispasmodics and
also certain food supplements based on ferments (Saccharomyces
cerevisiae, Bifidobacterium, Lactobacillus), on plants or on fiber
(oligofructose, fennel, algae, oats, citrus fruits, etc.), or
having a mineral structure (octalite, etc.). These treatments are,
however, poorly effective on the symptoms linked to gas formation
in the colon, and do not act selectively. The present invention
proposes to remedy the drawbacks of the prior art, both in terms of
treatment and in terms of preventing digestive discomfort
associated with production of gas in the colon.
[0003] To do this, the invention is based both on the physiological
characteristics of hydrogenotrophic acetogenic bacteria, namely
their ability to reduce the total volume of digestive fermentation
gases (H.sub.2 and CO.sub.2), and on their nutritional diversity
which confers on them a considerable ecological advantage in the
digestive ecosystem compared to other hydrogenotrophic
microorganisms.
[0004] In humans, dietary carbohydrates which escape digestion and
absorption in the small intestine arrive in the colon where they
are fermented by a complex microflora. This anaerobic degradation
of organic matter produces terminal metabolites in the form of
volatile fatty acids having metabolic (acetate, propionate) or
trophic (butyrate) properties and also gases (H.sub.2, CO.sub.2
and, in some individuals, CH.sub.4).
[0005] Among these fermentation gases, H.sub.2 plays an important
role in the maintaining and the effectiveness of degradation of
organic matter in the human colon. Some H.sub.2 is eliminated via
the respiratory and rectal pathways, but most of this gas is
reutilized in situ by the intestinal flora. The latter, called
hydrogenotrophic flora, is composed of acetogenic bacteria, of
sulfur-reducing bacteria and of methanogenic archaea.
[0006] Sulfur-reducing bacteria are found in the digestive
microflora of all individuals (Pochard et al. (1992) FEMS
Microbiol. Lett. 98 p 225). They synthesize H.sub.2S, which is a
potentially toxic product for eukaryotic cells, and which is
thought to be involved in some diseases of the digestive system, in
particular ulcerative colitis (Roediger et al. (1993),
Gastroenterology, 104, p 802).
[0007] Methanogenic archaea produce CH.sub.4, which is a nontoxic
gas. This methane production is only observed in a fraction of the
human population (approximately 21% of adult Indians, 95% of the
rural population of adolescents in black Africa and 40% of the
Western population) and it is eliminated via the respiratory
pathway and in flatulence (Segal et al. (1988) Gut 29 p 608;
Pochart et al. (1992) FEMS Microbiol. Lett. 98 p 225). These
individuals, called methane excreters, harbor a very large
population of methanogenic archae (>10.sup.8/g of dry fecal
extract) (Durand et al. (1996) in: Malkki Y and Cummings J H (eds
Official Publications of the European Communities, p 58). In these
individuals, methanogenesis is the main pathway for elimination of
H.sub.2.
[0008] Individuals who are not methane excreters re-use H.sub.2 via
alternative mechanisms, among which is reductive acetogenesis. This
pathway constitutes a major metabolic process for using H.sub.2 in
non-methane excreters.
[0009] Studies have indeed shown that the fecal microflora of
non-methane-excreting individuals mainly metabolizes H, and
CO.sub.2 to acetate, whereas that of methane-excreting individuals
uses H.sub.2 and CO.sub.2 to form methane (Lajoie et al. (1988)
Appl. Environ. Microbiol. 54 p 2733; Bernalier et al. (1996) FEMS
Microbiol. Ecol. 19 p 193). In parallel, Dore et al. (1995 FEMS
Microbial. Ecol. 17 p 279) have shown the existence of a negative
correlation between the number of methanogenic archaea and that of
acetogenic bacteria in the human colon. Non-methane-excreting
individuals therefore harbor little or no methanogenic archaea in
the colon, which would allow maximum expression of their acetogenic
activity (Lajoie et al. (1988) Appl. Environ. Microbiol. 54 p 2733;
Bernalier et al. (1996) FEMS Microbiol. Ecol. 19 p 193).
[0010] The hydrogenotrophic, acetogenic flora is characterized by
great taxonomic diversity. It is composed of bacterial species
belonging in particular to the Clostridium, Ruminococcus and
Streptococcus genera (Bernalier et al. (1996) Curr. Microbiol. 33 p
94) and also of certain species of the Eubacterium genus (Schink
(1994) in: Drake HL (ed) Acetogenesis. New York: Chapman and Hall p
197).
[0011] The term "hydrogenotrophic, acetogenic bacteria" is intended
to mean bacterial species which use the reductive pathway for
acetate synthesis (or Wood-Ljungdahl pathway) to produce this
metabolite when they grow autotrophically using H.sub.2/CO.sub.2
and also when they grow heterotrophically using an organic
substrate. These hydrogenotrophic, acetogenic bacteria have indeed
a large nutritional capacity and, besides using H.sub.2/CO.sub.2,
are capable of fermenting a considerable number of saccharides and
of organic compounds (Bernalier et al (1996), Curr. Microbiol., 33
p 94).
[0012] The hydrogenotrophic, acetogenic bacterial strains according
to the invention produce short-chain fatty acids (SCFA), in
particular acetate, from H.sub.2 and CO.sub.2 gases. This
production of SCFAs has a physiological advantage for the host,
such as the prevention (protection) or treatment of diverse
pathologies (see below).
[0013] The simultaneous presence of organic compounds and of
H.sub.2/CO.sub.2 in the culture medium (conditions equivalent to
those encountered in the human colon) may result in simultaneous
use of the two substrates via the hydrogenotrophic, acetogenic
strain (Breznak and Blum (1991), Arch. Microbiol., 156 p 105). This
phenomenon, called mixotrophy, allows the bacterium to have a
higher energetic yield and therefore to grow more rapidly.
[0014] This ability to consume H.sub.2/CO.sub.2 combined with the
ability to use a large number of organic substrates and also the
ability to grow by mixotrophy therefore confers a considerable
ecological advantage on acetogenic bacteria compared to populations
of methanogens which use only a limited number of substrates
(H.sub.2, formate), and sulfur-reducing populations which are
dependent on the presence of sulfate for their H.sub.2
metabolism.
[0015] It has been shown that the use of certain probiotic
preparations, containing bacteria such as propionic bacteria,
lactobacilli and/or bifidobacteria, makes it possible to modify the
flora in the colon of certain patients (Bougle et al. (1999) Scand.
J. Gastroenterol. 34 p 144; Venturi et al. (1999) Aliment.
Pharmacol. Ther. 13 p 1103).
[0016] The use of acetogenic bacteria as probiotics as defined by
Fuller (1989, J. Appl. Bact., 66 p 365), in preparations which can
be used as food medicaments or as food supplements, therefore
proves to be a particularly innovative pathway of interest, since
their ability to metabolize H.sub.2/CO.sub.2 would make it possible
to optimize fermentations in the colon by decreasing the total
volume of fermentation gases and by producing acetate, a source of
energy which can be metabolized by the host. The reduction of the
digestive gases would thus be an effective means for preventing
and/or treating digestive disorders associated with accumulation of
these gases.
[0017] An object of the present invention is therefore the use of
nonpathogenic, hydrogenotrophic, acetogenic strains, for regulating
the abovementioned digestive disorders and/or modulating the
balance of the microbial flora in a mammal.
[0018] The mammals according to the present invention are
preferably monogastric mammals, as opposed to polygastric mammals
such as ruminants. Felines and canines are particularly intended,
especially domestic mammals (cats and dogs), and also humans.
[0019] The term "nonpathogenic" is intended to mean a microbial
species for which no pathology of the host associated with its
presence has been demonstrated (strain GRAS=Generally Recognized As
Safe).
[0020] Such a use may be envisioned in various ways. The present
invention relates to a prophylactic or therapeutic use, in order to
prevent and/or treat certain disorders of the digestive system.
This prevention and/or treatment may be carried out via regulation
of the gases produced in the colon, through modulating the
microbial flora. A use of this type may be envisioned under the
direction of a physician or a health professional. In this case,
the health professional decides upon the dose, the duration of
treatment and also a possible combination of the nonpathogenic,
hydrogenotrophic, acetogenic strain with other active principles
effective in preventing and/or treating the digestive disorders
targeted. Such a use may also require monitoring of the
nonpathogenic, hydrogenotrophic, acetogenic strain using a method
of analysis according to the invention, as defined later.
[0021] The present invention also relates to a therapeutic and/or
prophylactic use in which the user, himself or herself, decides
upon the administration of the nonpathogenic, hydrogenotrophic,
acetogenic strain. The desired aim is then to decrease the
discomfort of the user, who wishes, for example, to improve his or
her quality of life.
[0022] Specifically, the digestive disorders targeted by the
present invention affect the quality of life of the patients who
suffer therefrom. The degree of digestive discomfort engendered
and/or the capacity of each individual to put up with these
disorders determine(s) whether or not affected individuals consult
a physician.
[0023] In particular, the invention relates to the use of
hydrogenotrophic, acetogenic strains, for preparing a composition
for the following applications: [0024] (1) preventing and/or
treating digestive functional disorders, [0025] (2) modulating the
balance of the microbial flora in the colon by advantageously
promoting the activity of the acetogenic bacterial flora, in
particular to the detriment of the methanogenic and sulfur-reducing
bacterial flora.
[0026] The latter point has the advantage: [0027] (1) of decreasing
the formation of CH.sub.4 gas, [0028] (2) of decreasing the
production of H.sub.2S, a toxic product, involved in initiating
and/or developing digestive pathologies, [0029] (3) of promoting
the production of metabolites which are healthy for the host.
[0030] In particular, a strain of the Ruminococcus, Clostridium or
Streptococcus genus, preferably Ruminococcus hydrogenotrophicus, is
used.
[0031] Thus, the present invention relates to the use of at least
one nonpathogenic, hydrogenotrophic, acetogenic bacterial strain,
for preparing a composition for preventing and/or treating
gastrointestinal disorders by reducing the formation of potentially
toxic gases, and/or for modulating the microbial balance of the
digestive ecosystem in a mammal. Such food or pharmaceutical
compositions are also objects of the present invention.
[0032] Said reduction and/or said modulation is (are) carried out
by decreasing the amount of gaseous hydrogen (H.sub.2) and/or of
gaseous carbon dioxide (CO.sub.2) produced during digestive
fermentations.
[0033] Said reduction and/or modulation may also be carried out by
increasing the activity of the acetogenic flora in the colon to the
detriment of the methanogenic and/or sulfate-reducing flora.
[0034] The gastrointestinal disorders that the use of a composition
containing at least one hydrogenotrophic, acetogenic bacterial
strain proposes to reduce are included in the group of functional
gastrointestinal disorders, and in particular excessive flatulence,
meteorism, bloating and abdominal pain, which are major criteria
characterizing irritable bowel syndrome. The composition containing
at least one hydrogenotrophic, acetogenic bacterial strain can also
be used in the case of ulcerative colitis, of inflammatory bowel
diseases or of Crohn's disease, in order to reduce the volume of
gases in the colon, a factor which worsens the symptoms of these
pathologies.
[0035] In a preferred embodiment of the invention, said composition
is a food composition which can be used in the production of new
foods or food ingredients as defined in EC Regulation No. 258/97,
and in particular in the manufacture of functional foods. A food
may be considered to be functional if it is demonstrated
satisfactorily that it exerts a beneficial effect on one or more
target functions in the organism, beyond the usual nutritional
effects, improving the state of health and of well-being and/or
reducing the risk of a disease (Diplock et al. Scientific concepts
of functional foods in Europe: consensus document, British Journal
of Nutrition, 1999, 81, S1-S27).
[0036] Said composition may in particular constitute a probiotic
packaged, for example, in the form of a capsule or a gelatin
capsule.
[0037] It is thus possible to use a food composition according to
the invention which contains a nonpathogenic, hydrogenotrophic,
acetogenic strain and which gives the user a feeling of well-being
by reducing digestive discomfort.
[0038] In another preferred embodiment of the invention, said
composition is a pharmaceutical composition, also combined with a
pharmaceutically acceptable carrier, which may comprise excipients.
It is preferably administered orally or directly in situ, in
particular by coloscopy, or rectally via suppositories.
[0039] In another embodiment of the invention, the pharmaceutical
composition also comprises at least one other agent active against
at least one of the pathologies targeted.
[0040] The pharmaceutical or food composition according to the
invention may be administered orally, in the form of gelatin
capsules, of capsules, of tablets, of powders, of granules or of
oral solutions or suspensions. The at least one bacterial strain
can be mixed with conventional excipients, such as gelatin, starch,
lactose, magnesium stearate, talc, gum arabic and the like. It may
also be advantageous to use less conventional excipients, which
make it possible to increase the ability of the at least one
bacterial strain used to be active in the colon. For example,
cellobiose, maltose, mannose, salicine, trehalose, amygdalin,
arabinose, melobiose, rhamnose and/or xylose may be added. This
list is not exhaustive and the substrates are chosen and adapted as
a function of the strain considered. These substrates may promote
heterotrophic and/or mixotrophic growth of the at least one
acetogenic strain present in the composition.
[0041] Thus, the composition preferably comprises at least one
additive which promotes the activity of the at least one strain in
the digestive environment.
[0042] In a particular embodiment of the invention, the at least
one nonpathogenic, hydrogenotrophic, acetogenic bacterial strain
present in the pharmaceutical and/or food composition is
administered in a form which allows it to be active in the colon.
In particular, it is necessary for the at least one nonpathogenic,
hydrogenotrophic, acetogenic bacterial strain to be alive, or
viable, in the digestive tract, and in particular the colon. After
production of the at least one nonpathogenic, hydrogenotrophic,
acetogenic bacterial strain, and depending on the methods of
production, it is also possible to maintain this strain under
anaerobic packaging Conditions in order to enable it to remain
viable.
[0043] In a preferred embodiment, the at least one nonpathogenic,
hydrogenotrophic, acetogenic bacterial strain is packaged in an
anaerobic environment, i.e. it is packaged in an oxygen-free
atmosphere.
[0044] In another preferred embodiment of the invention, the at
least one nonpathogenic, hydrogenotrophic, acetogenic bacterial
strain present in the composition is an autologous strain of said
mammal, i.e. it can be isolated from the digestive system, in
particular from the feces, of other mammals belonging to the same
genus.
[0045] Preferably, and in particular when the mammal is a human,
the at least one nonpathogenic, hydrogenotrophic, acetogenic
bacterial strain belongs to the Ruminococcus genus, even more
preferably to the species Ruminococcus hydrogenotrophicus. Other
hydrogenotrophic, acetogenic bacteria, in particular bacteria of
the Streptococcus or Clostridium genus, in particular Clostridium
coccoides, can also be used.
[0046] The invention also relates to a method for specifically
monitoring the nonpathogenic, hydrogenotrophic, acetogenic
bacterial strain in the digestive tract of a mammal, after it has
been used as defined above, comprising the following steps: [0047]
a. a nucleotide sequence (probe) specific for the nonpathogenic,
hydrogenotrophic, acetogenic strain the detection of which is
desired is defined; [0048] b. said strain is detected and/or
quantified by hybridization of the probe with total nucleic acid
extracted from the fecal flora, or with the fecal bacteria attached
to a slide.
[0049] In order to carry out such a monitoring method, diagnostic
kits, which are also objects of the present invention, can be
developed. Such kits contain in particular a "standard" in order to
be able to evaluate the amount of bacteria in the feces.
[0050] Those skilled in the art are capable of defining a specific
sequence which does not hybridize with the DNA of other bacteria.
Similarly, those skilled in the art will choose hybridization on a
membrane or in situ hybridization depending on the means available
to them, and on the desired precision.
[0051] Preferably, the nucleic acid detected is the total bacterial
DNA, but can also be a mixture of DNA or of RNA, or the bacterial
RNA alone.
[0052] The presence of the at least one nonpathogenic,
hydrogenotrophic, acetogenic bacterial strain can also be studied
using other methods. Detection of the nucleic acids (DNA and/or
RNA) of the at least one nonpathogenic, hydrogenotrophic,
acetogenic bacterial strain in the feces of the mammal, in
particular by PCR or RT-PCR or by hybridization with specific
probes (Southern or Northern) will make it possible to detect the
presence of said strain and, optionally, the expression of certain
genes. An advantageous specific sequence can be chosen in the
sequence of the gene encoding the 16S rRNA, in particular a region
which is not present on the other species of the flora in the
colon.
[0053] The invention also covers a method for producing a
nonpathogenic, hydrogenotrophic, acetogenic bacterial strain, for
its use as defined above, characterized in that it comprises the
following steps: [0054] a. the strain is grown on a suitable
medium, under conditions of strict anaerobiosis, in the presence of
a carbon-based substrate and/or of H.sub.2/CO.sub.2 as energy
source; [0055] b. the bacterial cells are recovered; [0056] c. the
bacterial cells are packaged according to the pharmaceutical form
chosen.
[0057] The strain will preferably be grown in a modified AC21
medium (described in example 1), at 37.degree. C., in a fermenter.
The carbon-based substrate may be glucose.
[0058] A preferred method for recovering the bacterial cells is
centrifugation, for example between 10 000 g and 15 000 g,
advantageously 12 000 g, for 15 to 20 minutes. Those skilled in the
art are capable of optimizing these parameters.
[0059] The bacteria may advantageously be washed between steps b
and c, in particular in an anaerobic phosphate buffer, by
resuspension of the cells, agitation, and a further centrifugation
step.
[0060] The bacterial pellet, which may or may not be washed, is
packaged as a function of the pharmaceutical form chosen. An
advantageous method is lyophilization.
[0061] The following examples make it possible to illustrate the
invention but should not, however, be considered to be
limiting.
DESCRIPTION OF THE FIGURES
[0062] FIG. 1: Influence of a 14-day treatment with Ruminococcus
hydrogenotrophicus on the amounts of hydrogen excreted by rats with
human flora in a normal nutritional situation.
[0063] FIG. 2: Influence of a 14-day treatment with Ruminococcus
hydrogenotrophicus on the amounts of hydrogen excreted by rats with
human flora after administration of lactulose.
EXAMPLES
Example 1
Isolation of the Microorganisms
[0064] Human fecal samples from healthy non-methane-excreting
volunteers are used. Individuals are considered to be
non-methane-excreting when their level of expired methane does not
exceed by more than 1 ppm that of ambient air, which is 1.8 ppm
(Bond et al. (1970) Gastroenterology 58 p 1035), and when the
number of methanogens contained in their fecal extracts is less
than 10.sup.7/g of fecal extract (Bernalier et al. (1996) Arch
Microbiol. 166 p 176). The level of methane is determined using a
chromatograph equipped with a flame ionization detector. The
freshly taken fecal samples are kept at 4.degree. C. under strict
anaerobiosis for a maximum of 10 hours.
[0065] The enriching, isolating and culturing of the microorganisms
are carried out on a semi-synthetic medium, modified AC-21 medium
(Breznak et al. (1988) Arch. Microbiol. 150 p 282) under strict
anaerobiosis (Hungate (1969) in: Norris J R and Gibbons D W (eds)
Methods in microbiology Vol. 3B, New York: Academic Press p 117).
The composition per liter of the semi-synthetic medium is as
follows:
TABLE-US-00001 KH.sub.2PO.sub.4 0.2 g NH.sub.4Cl 0.25 g KCl 0.5 g
CaCl.sub.2.cndot.2H.sub.2O 0.15 g MgCl.sub.2.cndot.6H.sub.2O 0.6 g
Na.sub.2SO.sub.4 0.1 g Yeast extract 0.5 g Tryptone 2 g Trace
element solution 1 ml Tungstate-selenium solution 0.1 ml Vitamin
solution 5 ml Resazurin solution (1%, w/v) 1 ml NaHCO.sub.3 (1 M)
30 ml Cysteine/sulfide reductive solution 20 ml (1.25%/1.25%,
w/v)
[0066] The trace element solution is prepared according to Widdel
et al. (1983, Arch. Microbiol., 134, p 286), and the vitamin
solution is prepared according to Greening and Leedle (1989, Arch.
Microbiol., 151, p 399). The tungstate-selenium solution has the
following composition: 0.1 mM Na.sub.2WO.sub.4 and 0.1 mM
Na.sub.2SeO.sub.3, in 20 mM NaOH.
[0067] The semi-synthetic medium is solidified by adding a gelling
agent (agar at 2%). After inoculation, the gas of the culture
medium is replaced with H.sub.2/CO.sub.2 or N.sub.2/CO.sub.2
depending on the test envisioned.
[0068] The dilution medium is a purely inorganic anaerobic medium
(Dore et al. (1995) FEMS Microbiol. Lett. 130 p 7). A stock
solution is prepared (diluted to one tenth, w/v) from a fecal
sample. A series of ten-fold dilutions is prepared from the stock
suspension. The dilutions thus prepared are inoculated into the
semi-synthetic liquid medium containing H.sub.2/CO.sub.2 (60:40,
v/v, 202 kPa) as the only energy source (Dore et al. (1995) FEMS
Microbial. Lett. 130 p 7; Bernalier et al. (1996) FENS Microbiol.
Ecol. 19 p 193; Bernalier et al. (1996) Curr. Microbiol. 33 p 94).
After incubation at 37.degree. C. for 20 days, the enrichments are
obtained from the highest dilution tubes exhibiting the highest
bacterial growth, gas consumption and stoichiometric production of
acetate (Bernalier et al. (1996) Curr. Microbiol. 33 p 94). The
decrease in gas pressure in the cultures is determined by directly
measuring partial pressure with a manometer of the Capsuhelic type
(Dwyer, Instruments, Michigan City, Mich., USA). After three
transfers of the enriched cultures, bacterial colonies are isolated
using the method of roll-tubes (Hungate (1969) in: Norris J R and
Gibbons D W (eds) Methods in microbiology Vol. 3B, New York:
Academic Press p 117) containing a homologous agar medium and
H.sub.2/CO.sub.2 as energy source. After incubation for 20 days at
39.degree. C., the colonies are transferred into liquid media.
Purification of the cultures is obtained after 3 to 5 successive
transfers in roll-tubes, at the end of which the purity of the
cultures is determined by phase-contrast microscopy, after Gram
staining.
[0069] The total DNA of the isolated hydrogenotrophic, acetogenic
strains is extracted by the method of Lawson et al. (1989, FEMS
Microbiol. Lett. 65 p 41). The gene encoding the 16S ribosomal RNA
is then amplified by PCR using the universal primers ARI and pH.
The PCR products are purified and then sequenced using a
"Dye-Dideoxy Terminator cycle Sequence" kit and an Applied
Biosystem model 373A automatic sequencer. The search for 16S rRNA
sequence homology between the isolated acetogenic strains and the
other species is carried out using the PASTA program, the sequence
databases being those of EMBL and of RDP, and using the suggested
basic parameters. The sequence alignments are verified
manually.
[0070] Using this method, it was possible to isolate a bacterium of
the Ruminococcus genus, identified as being the species
Ruminococcus hydrogenotrophicus. This bacterium was deposited with
the Deutsche Sammlung von Mikroorganismen [German Microorganism
Collection] (Mascheroder Weg 1b, 38124 Braunschweig, Germany) under
the number DSM 10507, and also under the number DSM 14294, on May
10, 2001 (Treaty of Budapest).
Example 2
Study of the General Characteristics
[0071] 1--The membrane type of the bacteria is determined by Gram
staining (conventional method) and by the KOH test according to
Buck (1982 App. Environ. Microbiol. 44 p 992). [0072] 2--The
catalase activity is measured by mixing of bacterial suspension
with a few drops of H.sub.2O.sub.2 (30%). The production of gas
bubbles being released more or less strongly indicates the presence
of a catalase. [0073] 3--The cytochrome oxidase activity is studied
by placing a bacterial colony on a disk of filter paper saturated
with dimethyl p-phenylenediamine. A red/purple coloration occurring
immediately on the disk indicates that the test is positive. [0074]
4--The morphological characteristics of the cultures are studied by
phase-contrast microscopy and by electron microscopy after negative
staining with 2% uranyl acetate. The cells are pre-fixed in 2%
glutaraldehyde (15 h at 4.degree. C.) and then fixed with 2%
OsO.sub.4 (4.degree. C., for a maximum of 15 h). The cells are then
embedded in EPPON-812 and the blocks are very thinly sectioned.
These sections are contrasted with uranyl acetate, soaked in
acetate salt and observed with a transmission electron microscope
(Philips 400). [0075] 5--The respiratory type of the bacteria is
studied by determining growth in the presence or absence of
O.sub.2. [0076] 6--The effect of variations in pH on bacterial
growth is studied by modifying the CO.sub.2/NaHCO.sub.3 ratio of
the semi-synthetic medium (Costilow (1981) American Society for
Microbiology, Washington D.C. p 66). The bacterial growth is
measured (DO600) after 24 or 48 h of incubation at 37.degree. C.
Investigation of the optimal growth temperature is carried out on
semi-synthetic medium containing glucose and the growth is observed
at temperatures ranging from 20 to 45.degree. C. Each experiment is
carried out in triplicate. Bacterial growth is monitored using a
Spectronic 20D spectrophotometer (Bioblock Scientific, Illkirch,
France).
[0077] It was found that Ruminococcus hydrogenotrophicus DSM 10507
is an unsporulated, strictly anaerobic Gram-positive coccobacillus.
The negative staining reveals the absence of flagellae. The
bacterial cells are individual or in pairs. The strain does not
have catalase or cytochrome oxidase. The optimal growth temperature
and pH are, respectively, 35-37.degree. C. and 6.6. The colonies
are translucent, white to slightly brown in color with regular
edges, circular and between 1 and 2 mm in diameter.
Example 3
Growth Test, Determination of the Acetogenic Activities
[0078] The ability of various bacterial strains to metabolize
H.sub.2/CO.sub.2 and to form acetate is studied. The strains of
Ruminococcus hydrogenotrophicus DSM 10507, and also those
taxonomically close, Ruminococcus productus DSM 3507, Ruminococcus
productus DSM 2950, Ruminococcus hansenii DSM 20583 and Clostridium
coccoides DSM 935 (DSM numbers corresponding to the numbers of the
organisms deposited with the Deutsche Sammlung von
Mikroorganismen), are incubated on the modified AC-21 medium in the
presence of H.sub.2/CO.sub.2 (60:40, v/v, 202 kPa) as energy
source. Control cultures are incubated under N.sub.2/CO.sub.2
(60:40, v/v, 150 kPa). Three cultures (1 control and 2 tests) are
prepared for each bacterial strain. The autotrophic growth is
determined by incubation for 96 h in the presence of
H.sub.2/CO.sub.2 (60:40, v/v, 202 kPa). Acetate production is
measured using an enzymatic test (Boehringer Mannheim, Meylan,
France), after incubation for 6 days at 37.degree. C.
[0079] H.sub.2/CO.sub.2 consumption is measured by determination of
the gaseous volume consumed by chromatographic (CPG) analysis of
the composition of the gaseous phase.
[0080] The heterotrophic growth of the acetogenic strains
(OD.sub.600) is studied by incubating the bacteria for 20 h with
glucose (2 g/l) or fructose (2 g/l) as the only source of
energy.
[0081] The glucose fermentation is studied by incubating the cells
at 37.degree. C. for 20 h on the semi-synthetic medium containing 2
g/l of glucose and an atmosphere composed of 100% of CO.sub.2. At
the end of incubation, the volatile fatty acids of the supernatant
are assayed by chromatography, after conversion to tertiary
derivatives of butyldimethyl (Richardson et al. (1989) Lett. Appl.
Microbiol. 9 p 5).
[0082] It is observed that the doubling time for R.
hydrogenotrophicus at 37.degree. C. on modified AC-21 medium in the
presence of H.sub.2/CO.sub.2 (60:40, v/v, 202 kPa) as substrate is
26.4 h. The doubling times for R. hydrogenotrophicus at 37.degree.
C. with glucose or fructose as energy source are approximately 2 or
3 h.
[0083] It is observed that the bacterial strain studied is
acetogenic: it exhibits autotrophic growth in the presence of
H.sub.2/CO.sub.2 and produces acetate as major metabolite (Table
I). Among the taxonomically close species, acetogenic activity
(i.e. consumption of H.sub.2/CO.sub.2 and production of acetate) is
found in C. coccoides and much more weakly in R. hansenii and R.
productus.
[0084] R. hydrogenotrophicus DM 10507 consumes approximately 120 mM
of H.sub.2 after 96 hours of culturing at 37.degree. C. (1.25 mM of
H.sub.2 consumed per hour). Total acetate production is then equal
to 30 mM (stoichiometry: 4H.sub.2 consumed per acetate formed).
TABLE-US-00002 TABLE I Fermentation characteristics of the strains
cultured in the presence of H.sub.2/CO.sub.2 or glucose as the only
energy source. R. hydrogenotrophicus C. coccoides R. productus R.
productus R. hansenii DSM DSM DSM DSM DSM Properties 10507 935 3507
2950 20853 Use of ++ + - + +/- H.sub.2/CO.sub.2 H.sub.2/CO.sub.2 FP
Acetate ++ + - + +/- Propionate - - - - - Butyrate - - - - -
Lactate - - - - - Succinate - - - - - Ethanol - - - - - Glucose FP
Acetate ++ + ++ ++ ++ Propionate - - - - - Butyrate - - - - -
Lactate + - - - + Succinate - ++ - - + Ethanol + - + + - Symbols:
FP: fermentation products; ++, major metabolite; +, nonmajor
metabolite; +/-, metabolite produced in small amount; -, metabolite
not produced.
Example 4
Estimation of the Hydrogenotrophic, Acetogenic Capacity of R.
hydrogenotrophicus by Measurement of the Incorporation of
.sup.13CO.sub.2 into Acetate (NMR Method)
[0085] The incorporation of .sup.13CO.sub.2 into acetate is
measured by NMR using cell suspensions of R. hydrogenotrophicus
incubated in the presence of H.sub.2. The bacteria are cultured in
a 1 l flask containing 250 ml of AC21 medium as described in
example 1, and H.sub.2/CO.sub.2 as the only energy source. After
growth at 37.degree. C., the bacterial cells are recovered by
centrifugation (12 000 g for 20 minutes) and resuspended in a
phosphate buffer containing 20 mM of NaH.sup.13CO.sub.3 (Leclerc et
al (1997), Anaerobe, 3, p 307). The suspensions are incubated for
20 hours at 37.degree. C., under an atmosphere composed of 100% of
N.sub.2 (control) or of H.sub.2/N.sub.2 (80/20, v/v), at 101 atm.
At the end of incubation, the suspensions are again centrifuged at
12 000 g for 20 minutes and the supernatants are recovered. Total
acetate production is measured by an enzymatic method
(Boehringer-Mannheim kit). The .sup.13C-labeled metabolites are
analyzed by NMR (Bernalier et al, (1996), FEMS Microbial. Ecol.,
19, p 193).
[0086] When the bacterium is incubated in the presence of H.sub.2,
the only metabolite detected by .sup.13C NMR is acetate. The
.sup.13C-acetate is labeled in an equivalent manner on its methyl
and carboxyl groups. The double-labeled acetate represents 72% of
the total labeled acetate. This confirms that the synthesis of
acetate from H.sub.2 and CO.sub.2 by R. hydrogenotrophicus occurs
via the reductive pathway for acetogenesis.
Example 5
Determination of the Nutritional Capacities of the Acetogenic
Bacteria
[0087] The metabolism of other organic substrates by the acetogenic
bacteria is evaluated using a modified AC-21 medium containing 5 or
10 mM of substrate, in an atmosphere composed of 100% 002. The test
is considered to be positive when the bacterium maintains its
growth after three successive transfers on a medium containing the
same substrate, and if the OD.sub.600 of the culture is at least
equal to double that observed with a basal semi-synthetic medium
(free of organic substrate), after incubation for 24 h at
37.degree. C.
[0088] It is observed that many organic substrates allow
heterotrophic growth of the bacteria considered (Table II).
TABLE-US-00003 TABLE II Growth of R. hydrogenotrophicus and of the
taxonomically close species in the presence of various organic
substrates R. hydrogenotrophicus C. coccoides R. productus R.
productus R. hansenii DSM DSM DSM DSM DSM Substrate 10507 935 3507
2950 20853 Starch - - + + - Amygdalin - + + + +/- Arabinose - + + +
- Cellobiose + + + + - Fructose + + + + - Galactose + + + + +
Inulin - - - - + Lactose + + + + + Maltose +/- + + + + Mannitol - +
+ + - Mannose + + + + - Melibiose +/- + + + + Raffinose + + + + +
Rhamnose - + - - - Salicine + + + + - Sorbitol - + + + - Sucrose -
+ + + - Trehalose + + + + + Xylose - + + + - Symbols: -, no visible
growth; +/-, weak growth; +, good growth.
[0089] Furthermore, the growth of various hydrogenotrophic,
acetogenic strains isolated from human stools, in the presence of
various aromatic compounds such as vanillate, caffeate or
syringate, is estimated by measuring the optical density at 600 nm
using a Spectronic 20D spectrophotometer (the effect of adding
H.sub.2 to the gaseous phase of these cultures is also studied).
The amount of degraded substrate is determined by HPLC, as is the
nature of the metabolites formed.
[0090] The ability to metabolize the various aromatic substrates
tested depends on the hydrogenotrophic, acetogenic strain
considered. The Clostridium species are capable of growing and of
degrading 20% to 30% of the caffeate and of the syringate, this
degradation reaching 100% when H.sub.2 is added to the culture. One
of the strains of Clostridium degrades vanillate only in the
presence of H.sub.2 in the gaseous phase. This strain demethylates
the vanillate to protocatechuate in a first step, and then, using
H.sub.2, decarboxylates this compound to catechol. The R.
hydrogenotrophicus strain exhibits only weak activity with respect
to vanillate, this metabolism not appearing to be influenced by the
presence of H.sub.2.
[0091] The ability of R. hydrogenotrophicus to use 2 organic
substrates not able to be digested by the host's enzymes,
fructo-oligosaccharides (FOS) and lactulose, is also determined
according to the protocol described in this example [measurement of
bacterial growth (optical density at 600 nm) observed in the
presence of 2 g/l of each of the indigestible substrates, and
maintenance of this growth after 3 successive transfers on the same
substrate]. R. hydrogenotrophicus proves to be incapable of
metabolizing these 2 substrates.
Example 6
Mixotrophic Nature of the Hydrogenotrophic, Acetogenic Strain
Ruminococcus hydrogenotrophicus
[0092] In order to determine whether R. hydrogenotrophicus is
capable of growing by mixotrophy (simultaneous use of an organic
substrate and of an inorganic substrate), the strain is cultured in
the presence of two energy sources, one organic, glucose, and the
other inorganic, H.sub.2/CO.sub.2. The culture medium (modified
AC21 medium as described in example 1) contains 1.4 mM of glucose
and the gaseous phase is replaced, after seeding, with a mixture of
H.sub.2/CO.sub.2 (60/40 at 156 kPa). The cultures are inoculated
with 0.3 ml of a preculture of R. hydrogenotrophicus obtained
either with glucose or with H.sub.2/CO.sub.2 as the only energy
source. The consumption of gas by the strain is monitored during
the incubation at 37.degree. C., using pressure sensors attached to
the culture stoppers (Leclerc et al. (1997), Anaerobe 3 p 307).
Bacterial growth is estimated by measuring the optical density of
the cultures at 600 nm using a Spectronic 20D spectrophotometer.
Culture supernatant samples are taken every 2 hours in order to
estimate glucose consumption (assay of remaining glucose using
Boehringer enzymatic method) and fermentative metabolite production
by chromatographic assaying (as described in example 3).
[0093] R. hydrogenotrophicus proves to be capable of co-using the
two substrates tested. A single exponential growth phase for the
bacterium is observed in the presence of the two substrates. During
this exponential phase, simultaneous consumption of glucose and of
H.sub.2/CO.sub.2 is observed. This reflects the mixotrophic nature
of R. hydrogenotrophicus with regard to these 2 substrates (Leclerc
and Bernalier, submitted for publication). At the end of the
exponential phase, the glucose has been completely consumed by the
bacterium, which bacterium then maintains its metabolism in the
stationary growth phase by using the remaining
H.sub.2/CO.sub.2.
[0094] The ability of R. hydrogenotrophicus to cometabolize a
sweetener, fructose, and H.sub.2/CO.sub.2, is also studied. The
strain is cultured on the AC21 medium, as described in example 1,
in the presence of these two energy sources. Various concentrations
of fructose are tested (2 .mu.l, 0.5 and 0.25 g/l), the gaseous
phase still being composed of H.sub.2/CO.sub.2 (60/40, v/v, 202
kPa). The experimental protocol then used is the same as that
described above.
[0095] R. hydrogenotrophicus proves to be capable of cometabolizing
fructose and H.sub.2/CO.sub.2, the bacterial growth being
characterized by a single exponential growth phase in the presence
of the two substrates. This mixotrophic growth is observed whatever
the concentration of fructose present in the culture medium and
whatever the origin of the bacterial inoculum (preculture prepared
on fructose or H.sub.2/CO.sub.2 or fructose+H.sub.2CO.sub.2). In
the stationary growth phase, the bacterium metabolizes only
H.sub.2/CO.sub.2, all the fructose having been consumed.
Example 7
Effect of Lyophilizing the Ruminococcus hydrogenotrophicus Cultures
on Expression of the Hydrogenotrophic Activity
[0096] In order to determine whether conserving R.
hydrogenotrophicus in lyophilized form may impair its ability to
use H.sub.2/CO.sub.2, various conditions for culturing, for
conserving the lyophilizates, and for resuspending the bacterium
are tested.
[0097] R. hydrogenotrophicus cultures are prepared in 1 l flasks
containing 250 ml of AC21 medium as described in example 1, with
fructose (2 g/l), H.sub.2/CO.sub.2 (60/40, v/v, 100 kPa) or both
substrates as energy source. These cultures are incubated at
37.degree. C. for 24 h, 48 h or 72 h, depending on the substrate(s)
used. Bacterial pellets are then obtained by centrifugation (15
300.times.g, 30 min, 4.degree. C.) of the cultures and are taken up
in 10 ml of anaerobic buffer. The suspensions thus obtained are
aliquoted by 2 ml and then centrifuged for 5 min at 14 000.times.g.
The bacterial pellets are then frozen at -80.degree. C. before
being lyophilized overnight. The lyophilizates are stored at
4.degree. C. under an aerobic or anaerobic (100% of CO.sub.2)
atmosphere. After storage for 15 to 30 days, the R.
hydrogenotrophicus lyophilizates are taken up in 5 ml of anaerobic
dilution buffer. These bacterial suspensions are then seeded into
an AC21 medium containing H.sub.2/CO.sub.2 (60/40, v/v, 200 kPa) as
the only energy source either directly or after enrichment for 48 h
at 37.degree. C., in a complex culture medium containing various
carbon sources. After incubation for 72 h at 37.degree. C. in the
presence of H.sub.2/CO.sub.2, the consumption of H.sub.2 and the
amount of acetate produced are determined for each culture.
[0098] Lyophilization of R. hydrogenotrophicus does not appear to
affect its hydrogenotrophic potential. The reason for this is that,
whatever the substrate used to preculture the strain (fructose,
H.sub.2/CO.sub.2 or both substrates simultaneously), the
hydrogenotrophic activity of R. hydrogenotrophicus is restored when
the lyophilizates are placed in culture. Similarly, the aerobic or
anaerobic method of storing the lyophilizate has little influence
on the expression of the hydrogenotrophic potential of the
bacterium. However, maximum hydrogenotrophic activity is observed
when R. hydrogenotrophicus is precultured in the presence of
fructose and when the lyophilizate is stored under an anaerobic
atmosphere. Similarly, prior culturing of the lyophilized bacteria
on a medium rich in organic substrates substantially increases the
expression of their hydrogenotrophic potential, whatever the
substrate used to preculture the strain and whatever the method of
storage of the lyophilizate. This effect is probably explained by
the increase in bacterial density engendered by the enrichment of
the lyophilized cultures on complex medium.
[0099] All the results obtained demonstrate that the R.
hydrogenotrophicus strain can be cultured in the presence of
organic substrate and then stored at 4.degree. C. in lyophilized
form in an aerobic or anaerobic atmosphere, without this
substantially affecting the subsequent expression of its
hydrogenotrophic potential.
Example 8
Interspecies Transfer of H.sub.2, In Vitro, Between
H.sub.2-Producing Fibrolytic Bacteria and R. hydrogenotrophicus
[0100] The ability of R. hydrogenotrophicus to use the H.sub.2
produced by fibrolytic bacterial species is studied in vitro, in
cocultures combining the acetogenic strain with a cellulolytic
bacterium. The two cellulolytic species studied were isolated in
the laboratory from human stools. The cocultures are prepared on a
semi-synthetic medium, developed in the laboratory, containing a
small cellulose strip of Whatman No. 1 filter paper as the only
carbon and energy source. Each one of these cellulolytic species is
seeded in a proportion of 0.5 ml of inoculum per culture tube.
After incubation for 48 h at 37.degree. C., 0.5 ml of R.
hydrogenotrophicus inoculum is added to each one of these cultures
of cellulolytic bacteria. Control monocultures of each cellulolytic
species are prepared in parallel.
[0101] Kinetics are produced by incubating the cultures at
37.degree. C. for 12 days. After incubation, the amount of H.sub.2
in the gaseous phase is analyzed by chromatography, the amount of
cellulose degraded is estimated by measuring the remaining solids
and the final products of fermentation of the cellulose are
determined by gas phase chromatography and/or by enzymatic pathways
(Roche kit).
[0102] The addition of R. hydrogenotrophicus to one or other of the
H.sub.2-producing cellulolytic species results in a large decrease
in this gas in the cocultures, whereas it accumulates in the
gaseous phase of the monocultures.
[0103] R. hydrogenotrophicus is therefore capable of effectively
re-using the H.sub.2 produced in vitro by a fibrolytic species
during fermentation of cellulose. This transfer of H.sub.2 between
R. hydrogenotrophicus and the cellulolytic species causes only
slight or no modification of the cellulolytic activity of the
fibrolytic species studied. On the other hand, the cellulose is
mainly fermented to acetate in the cocultures, whereas it is rather
of the mixed-acid type in the monocultures (production of acetate,
of succinate or of ethanol and of lactate).
Example 9
Ability of the Hydrogenotrophic, Acetogenic Strain Ruminococcus
hydrogenotrophicus to Reduce the Volume of Gases in the Colon In
Vivo, in Rats with Human Flora
[0104] In order to determine whether R. hydrogenotrophicus is
capable of reducing the volume of gases in the colon in the
presence of a complex digestive flora, R. hydrogenotrophicus is
administered orally to rats with human flora and the change in the
volume of gas in the colon is monitored by measuring the hydrogen
excreted via the respiratory and rectal pathways.
[0105] The effect of R. hydrogenotrophicus is studied in a normal
nutritional situation and after administration of a fermentable
substrate (lactulose) causing an abrupt increase in the volume of
gas in the colon.
[0106] The animals used are male Fischer 344 rats, 3 months old at
the beginning of the experiment. They are born free of
microorganisms, and are inoculated per os with 1 ml of a centesimal
suspension of fresh human fecal matter from a nonmethanogenic adult
donor having a Western-type diet. The inoculation takes place 2
weeks before the beginning of the experiment. The rats are housed
in isolators and receive a semi-synthetic "human-type" feed
(proteins and fats of animal and plant origins; raw and cooked,
simple and complex carbohydrates), sterilized by
.gamma.-irradiation at 45 kGy. Food and drinking water are
distributed ad libitum.
Normal Nutritional Situation
[0107] The experiment is carried out with 16 rats with human flora,
divided into 2 groups of 8, a control group and a treated group.
The rats in the treated group receive, each morning for 28 days, by
gastric intubation, a dose of 10.sup.8 to 10.sup.9 bacteria in the
form of 1 ml of an R. hydrogenotrophicus culture cultured for 18 h
on AC21 medium (as described in example 1) containing glucose (2
g/l). The control group receives, under the same conditions, 1 ml
of sterile AC21 medium containing glucose.
[0108] After 1, 14 and 28 days of treatment, the rats in the 2
groups are placed in individual respiratory chambers for 12 h,
making it possible to measure the hydrogen excreted via the
respiratory and rectal pathways (see description of the respiratory
chambers below). Air samples are taken in duplicate from the
respiratory chambers between 0 h and 12 h. The hydrogen
concentration is immediately determined by gas phase
chromatography. The results of the control and treated groups are
compared using an ANOVA for repeated measurements.
[0109] Whatever its duration of treatment, the administration of R.
hydrogenotrophicus significantly decreases the maximum amount of
hydrogen excreted (-50% to -80%) and the excretion rate (-60% to
-80%) compared to the control group (9<0.01). The treatment
proves to be as effective after 1, 14 or 28 days (FIG. 1).
[0110] The hydrogenotrophic, acetogenic flora is counted (Dore et
al, 1995) in the feces of the rats of the two groups, at various
times during the experiment. In the control group which does not
receive R. hydrogenotrophicus, the level of the acetogenic
population is stable over time and comparable to that of the donor,
i.e. approximately log 6.8 acetogens per g of feces.
[0111] The treatment with R. hydrogenotrophicus leads to an
increase in the level of acetogenic flora, which then reaches log
7.5/g of feces from 24 h of treatment. This level is maintained
until the end of the experiment. The increase in acetogenic flora
in the treated rats therefore coincides with the decrease in the
amounts of H.sub.2 excreted by these animals.
[0112] At the end of the experiment, the rats are sacrificed by
euthanasia and autopsied. The administration of R.
hydrogenotrophicus has no significant effect on either the
bodyweight or the weight of the liver, the kidneys and the cecum,
or on the pH of the cecum (P>0.05). Similarly, the macroscopic
appearance of the liver and of the kidneys of the rats treated with
R. hydrogenotrophicus is normal and identical to that of the
control rats.
b) After Administration of Lactulose
[0113] This experiment is carried out according to the same
protocol as above. Lactulose
(4-O-.beta.-D-galactopyranosyl-D-fructose), the fermentation of
which in the colon leads to an abrupt increase in the volume of
gas, is administered by gastric intubation, in a proportion of 500
mg per rat, just before they are placed in respiratory chambers.
The effect of R. hydrogenotrophicus on this increase is examined
after 1 and 14 days of treatment with the acetogenic strain.
[0114] Under these conditions of excessive production of gases in
the colon, the administration of R. hydrogenotrophicus
significantly decreases the maximum amount of hydrogen excreted
(-40% to -50%) and the excretion rate (-40% to -50%) compared to
the control group (P<0.05). The treatment proves to be as
effective after 1 or 14 days (FIG. 2).
[0115] In the 2 experiments, the rats treated with R.
hydrogenotrophicus showed no behavioral abnormality and the
appearance and consistency of the feces was identical to those of
the control rats.
[0116] The respiratory chambers used are sealed autonomous chambers
made of transparent rigid polyvinyl, with a volume of 30 liters,
making it possible to house a cage containing a small animal. They
are equipped with a double door for sealed transfer, making it
possible to connect them to the experimental isolators.
[0117] In order to preserve the bacterial status of the animals,
they are sterilized before being connected. After transfer of the
animal from the isolator to the respiratory chamber, the latter is
detached from the isolator and connected to a closed circuit in
which the air is pushed, using a peristaltic pump, through
antibacterial filters and systems for removing the CO.sub.2
(absorber containing a solution of potassium hydroxide at 40%) and
the water vapor (absorber containing silicagel crystals). The
O.sub.2 content in the air is measured with a sensor and kept
constant at 21% using an amperometric electrode, a control unit and
a solenoid valve.
[0118] This device allows accumulation of the gases specific for
fermentations in the colon (hydrogen and, where appropriate,
methane), excreted via the respiratory and rectal pathways.
* * * * *