U.S. patent application number 10/834850 was filed with the patent office on 2004-09-30 for isolated human transporter proteins, nucleic acid molecules encoding human transporter proteins, and uses thereof.
This patent application is currently assigned to APPLERA CORPORATION. Invention is credited to Beasley, Ellen M., Di Francesco, Valentina, Guegler, Karl, Merkulov, Gennady V., Wei, Ming-Hui.
Application Number | 20040191829 10/834850 |
Document ID | / |
Family ID | 26944124 |
Filed Date | 2004-09-30 |
United States Patent
Application |
20040191829 |
Kind Code |
A1 |
Merkulov, Gennady V. ; et
al. |
September 30, 2004 |
Isolated human transporter proteins, nucleic acid molecules
encoding human transporter proteins, and uses thereof
Abstract
The present invention provides amino acid sequences of peptides
that are encoded by genes within the human genome, the transporter
peptides of the present invention. The present invention
specifically provides isolated peptide and nucleic acid molecules,
methods of identifying orthologs and paralogs of the transporter
peptides, and methods of identifying modulators of the transporter
peptides.
Inventors: |
Merkulov, Gennady V.;
(Baltimore, MD) ; Guegler, Karl; (Menlo Park,
CA) ; Wei, Ming-Hui; (Germantown, MD) ; Di
Francesco, Valentina; (Rockville, MD) ; Beasley,
Ellen M.; (Darnestown, MD) |
Correspondence
Address: |
CELERA GENOMICS CORP.
ATTN: WAYNE MONTGOMERY, VICE PRES, INTEL PROPERTY
45 WEST GUDE DRIVE
C2-4#20
ROCKVILLE
MD
20850
US
|
Assignee: |
APPLERA CORPORATION
Norwalk
CT
|
Family ID: |
26944124 |
Appl. No.: |
10/834850 |
Filed: |
April 30, 2004 |
Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
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10834850 |
Apr 30, 2004 |
|
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09739457 |
Dec 19, 2000 |
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60254553 |
Dec 12, 2000 |
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Current U.S.
Class: |
435/6.11 ;
435/320.1; 435/325; 435/69.1; 530/350; 536/23.5 |
Current CPC
Class: |
A61K 38/00 20130101;
C07K 14/47 20130101; A61P 35/00 20180101; A61P 43/00 20180101 |
Class at
Publication: |
435/006 ;
435/069.1; 435/320.1; 435/325; 530/350; 536/023.5 |
International
Class: |
C12Q 001/68; C07H
021/04; C07K 014/705 |
Claims
That which is claimed is:
1. An isolated peptide consisting of an amino acid sequence
selected from the group consisting of: (a) an amino acid sequence
selected from the group consisting of: SEQ ID NO:3 and SEQ ID NO:4;
(b) an amino acid sequence of an allelic variant of an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4, wherein said allelic variant is encoded by a nucleic acid
molecule that hybridizes under stringent conditions to the opposite
strand of a nucleic acid molecule selected from the group
consisting of: SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:5; (c) an
amino acid sequence of an ortholog of an amino acid sequence
selected from the group consisting of: SEQ ID NO:3 and SEQ ID NO:4,
wherein said ortholog is encoded by a nucleic acid molecule that
hybridizes under stringent conditions to the opposite strand of a
nucleic acid molecule selected from the group consisting of: SEQ ID
NO:1, SEQ ID NO:2 and SEQ ID NO:5; and (d) a fragment of an amino
acid sequence selected from the group consisting of: SEQ ID NO:3
and SEQ ID NO:4, wherein said fragment comprises at least 10
contiguous amino acids.
2. An isolated peptide comprising an amino acid sequence selected
from the group consisting of: (a) an amino acid sequence selected
from the group consisting of: SEQ ID NO:3 and SEQ ID NO:4; (b) an
amino acid sequence of an allelic variant of an amino acid sequence
selected from the group consisting of: SEQ ID NO:3 and SEQ ID NO:4,
wherein said allelic variant is encoded by a nucleic acid molecule
that hybridizes under stringent conditions to the opposite strand
of a nucleic acid molecule selected from the group consisting of:
SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:5; (c) an amino acid
sequence of an ortholog of an amino acid sequence selected from the
group consisting of: SEQ ID NO:3 and SEQ ID NO:4, wherein said
ortholog is encoded by a nucleic acid molecule that hybridizes
under stringent conditions to the opposite strand of a nucleic acid
molecule selected from the group consisting of: SEQ ID NO:1, SEQ ID
NO:2 and SEQ ID NO:5; and (d) a fragment of an amino acid sequence
selected from the group consisting of: SEQ ID NO:3 and SEQ ID NO:4,
wherein said fragment comprises at least 10 contiguous amino
acids.
3. An isolated antibody that selectively binds to a peptide of
claim 2.
4. An isolated nucleic acid molecule consisting of a nucleotide
sequence selected from the group consisting of: (a) a nucleotide
sequence that encodes an amino acid sequence selected from the
group consisting of: SEQ ID NO:3 and SEQ ID NO:4; (b) a nucleotide
sequence that encodes of an allelic variant of an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4, wherein said nucleotide sequence hybridizes under
stringent conditions to the opposite strand of a nucleic acid
molecule selected from the group consisting of: SEQ ID NO:1, SEQ ID
NO:2 and SEQ ID NO:5; (c) a nucleotide sequence that encodes an
ortholog of an amino acid sequence selected from the group
consisting of: SEQ ID NO:3 and SEQ ID NO:4, wherein said nucleotide
sequence hybridizes under stringent conditions to the opposite
strand of a nucleic acid molecule selected from the group
consisting of: SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:5; (d) a
nucleotide sequence that encodes a fragment of an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4, wherein said fragment comprises at least 10 contiguous
amino acids; and (e) a nucleotide sequence that is the complement
of a nucleotide sequence of (a)-(d).
5. An isolated nucleic acid molecule comprising a nucleotide
sequence selected from the group consisting of: (a) a nucleotide
sequence that encodes an amino acid sequence selected from the
group consisting of: SEQ ID NO:3 and SEQ ID NO:4; (b) a nucleotide
sequence that encodes of an allelic variant of an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4, wherein said nucleotide sequence hybridizes under
stringent conditions to the opposite strand of a nucleic acid
molecule selected from the group consisting of: SEQ ID NO:1, SEQ ID
NO:2 and SEQ ID NO:5; (c) a nucleotide sequence that encodes an
ortholog of an amino acid sequence selected from the group
consisting of: SEQ ID NO:3 and SEQ ID NO:4, wherein said nucleotide
sequence hybridizes under stringent conditions to the opposite
strand of a nucleic acid molecule selected from the group
consisting of: SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:5; (d) a
nucleotide sequence that encodes a fragment of an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4, wherein said fragment comprises at least 10 contiguous
amino acids; and (e) a nucleotide sequence that is the complement
of a nucleotide sequence of (a)-(d).
6. A gene chip comprising a nucleic acid molecule of claim 5.
7. A transgenic non-human animal comprising a nucleic acid molecule
of claim 5.
8. A nucleic acid vector comprising a nucleic acid molecule of
claim 5.
9. A host cell containing the vector of claim 8.
10. A method for producing any of the peptides of claim 1
comprising introducing a nucleotide sequence encoding any of the
amino acid sequences in (a)-(d) into a host cell, and culturing the
host cell under conditions in which the peptides are expressed from
the nucleotide sequence.
11. A method for producing any of the peptides of claim 2
comprising introducing a nucleotide sequence encoding any of the
amino acid sequences in (a)-(d) into a host cell, and culturing the
host cell under conditions in which the peptides are expressed from
the nucleotide sequence.
12. A method for detecting the presence of any of the peptides of
claim 2 in a sample, said method comprising contacting said sample
with a detection agent that specifically allows detection of the
presence of the peptide in the sample and then detecting the
presence of the peptide.
13. A method for detecting the presence of a nucleic acid molecule
of claim 5 in a sample, said method comprising contacting the
sample with an oligonucleotide that hybridizes to said nucleic acid
molecule under stringent conditions and determining whether the
oligonucleotide binds to said nucleic acid molecule in the
sample.
14. A method for identifying a modulator of a peptide of claim 2,
said method comprising contacting said peptide with an agent and
determining if said agent has modulated the function or activity of
said peptide.
15. The method of claim 14, wherein said agent is administered to a
host cell comprising an expression vector that expresses said
peptide.
16. A method for identifying an agent that binds to any of the
peptides of claim 2, said method comprising contacting the peptide
with an agent and assaying the contacted mixture to determine
whether a complex is formed with the agent bound to the
peptide.
17. A pharmaceutical composition comprising an agent identified by
the method of claim 16 and a pharmaceutically acceptable carrier
therefor.
18. A method for treating a disease or condition mediated by a
human transporter protein, said method comprising administering to
a patient a pharmaceutically effective amount of an agent
identified by the method of claim 16.
19. A method for identifying a modulator of the expression of a
peptide of claim 2, said method comprising contacting a cell
expressing said peptide with an agent, and determining if said
agent has modulated the expression of said peptide.
20. An isolated human transporter peptide having an amino acid
sequence that shares at least 70% homology with an amino acid
sequence selected from the group consisting of: SEQ ID NO:3 and SEQ
ID NO:4.
21. A peptide according to claim 20 that shares at least 90 percent
homology with an amino acid sequence selected from the group
consisting of: SEQ ID NO:3 and SEQ ID NO:4.
22. An isolated nucleic acid molecule encoding a human transporter
peptide, said nucleic acid molecule sharing at least 80 percent
homology with a nucleic acid molecule selected from the group
consisting of: SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:5.
23. A nucleic acid molecule according to claim 22 that shares at
least 90 percent homology with a nucleic acid molecule selected
from the group consisting of: SEQ ID NO:1, SEQ ID NO:2 and SEQ ID
NO:5.
Description
RELATED APPLICATIONS
[0001] The present application claims priority to provisional
application U.S. Serial No. 760/254,553, filed Dec. 12, 2004 (Atty.
Docket CL001014-PROV), and application U.S. Ser. No. 09/739,457,
filed Dec. 19, 2000 (Atty. Docket CL001014).
FIELD OF THE INVENTION
[0002] The present invention is in the field of transporter
proteins that are related to the sugar transporter subfamily,
recombinant DNA molecules, and protein production. The present
invention specifically provides novel peptides and proteins that
effect ligand transport and nucleic acid molecules encoding such
peptide and protein molecules, all of which are useful in the
development of human therapeutics and diagnostic compositions and
methods.
BACKGROUND OF THE INVENTION
[0003] Transporters
[0004] Transporter proteins regulate many different functions of a
cell, including cell proliferation, differentiation, and signaling
processes, by regulating the flow of molecules such as ions and
macromolecules, into and out of cells. Transporters are found in
the plasma membranes of virtually every cell in eukaryotic
organisms. Transporters mediate a variety of cellular functions
including regulation of membrane potentials and absorption and
secretion of molecules and ion across cell membranes. When present
in intracellular membranes of the Golgi apparatus and endocytic
vesicles, transporters, such as chloride channels, also regulate
organelle pH. For a review, see Greger, R. (1988) Annu. Rev.
Physiol. 50:111-122.
[0005] Transporters are generally classified by structure and the
type of mode of action. In addition, transporters are sometimes
classified by the molecule type that is transported, for example,
sugar transporters, chlorine channels, potassium channels, etc.
There may be many classes of channels for transporting a single
type of molecule (a detailed review of channel types can be found
at Alexander, S. P. H. and J. A. Peters: Receptor and transporter
nomenclature supplement. Trends Pharmacol. Sci., Elsevier, pp.
65-68 (1997) and http://www-biology.ucsd.edu/.about.msaier/-
transport/titlepage2.html.
[0006] The following general classification scheme is known in the
art and is followed in the present discoveries.
[0007] Channel-type transporters. Transmembrane channel proteins of
this class are ubiquitously found in the membranes of all types of
organisms from bacteria to higher eukaryotes. Transport systems of
this type catalyze facilitated diffusion (by an energy-independent
process) by passage through a transmembrane aqueous pore or channel
without evidence for a carrier-mediated mechanism. These channel
proteins usually consist largely of a-helical spanners, although
b-strands may also be present and may even comprise the channel.
However, outer membrane porin-type channel proteins are excluded
from this class and are instead included in class 9.
[0008] Carrier-type transporters. Transport systems are included in
this class if they utilize a carrier-mediated process to catalyze
uniport (a single species is transported by facilitated diffusion),
antiport (two or more species are transported in opposite
directions in a tightly coupled process, not coupled to a direct
form of energy other than chemiosmotic energy) and/or symport (two
or more species are transported together in the same direction in a
tightly coupled process, not coupled to a direct form of energy
other than chemiosmotic energy).
[0009] Pyrophosphate bond hydrolysis-driven active transporters.
Transport systems are included in this class if they hydrolyze
pyrophosphate or the terminal pyrophosphate bond in ATP or another
nucleoside triphosphate to drive the active uptake and/or extrusion
of a solute or solutes. The transport protein may or may not be
transiently phosphorylated, but the substrate is not
phosphorylated.
[0010] PEP-dependent, phosphoryl transfer-driven group
translocators. Transport systems of the bacterial
phosphoenolpyruvate:sugar phosphotransferase system are included in
this class. The product of the reaction, derived from extracellular
sugar, is a cytoplasmic sugar-phosphate.
[0011] Decarboxylation-driven active transporters. Transport
systems that drive solute (e.g., ion) uptake or extrusion by
decarboxylation of a cytoplasmic substrate are included in this
class.
[0012] Oxidoreduction-driven active transporters. Transport systems
that drive transport of a solute (e.g., an ion) energized by the
flow of electrons from a reduced substrate to an oxidized substrate
are included in this class. Light-driven active transporters.
Transport systems that utilize light energy to drive transport of a
solute (e.g., an ion) are included in this class.
[0013] Mechanically-driven active transporters. Transport systems
are included in this class if they drive movement of a cell or
organelle by allowing the flow of ions (or other solutes) through
the membrane down their electrochemical gradients.
[0014] Outer-membrane porins (of b-structure). These proteins form
transmembrane pores or channels that usually allow the energy
independent passage of solutes across a membrane. The transmembrane
portions of these proteins consist exclusively of b-strands that
form a b-barrel. These porin-type proteins are found in the outer
membranes of Gram-negative bacteria, mitochondria and eukaryotic
plastids.
[0015] Methyltransferase-driven active transporters. A single
characterized protein currently falls into this category, the
Na+-transporting methyltetrahydromethanopterin:coenzyme M
methyltransferase.
[0016] Non-ribosome-synthesized channel-forming peptides or
peptide-like molecules. These molecules, usually chains of L- and
D-amino acids as well as other small molecular building blocks such
as lactate, form oligomeric transmembrane ion channels. Voltage may
induce channel formation by promoting assembly of the transmembrane
channel. These peptides are often made by bacteria and fungi as
agents of biological warfare.
[0017] Non-Proteinaceous Transport Complexes. Ion conducting
substances in biological membranes that do not consist of or are
not derived from proteins or peptides fall into this category.
[0018] Functionally characterized transporters for which sequence
data are lacking. Transporters of particular physiological
significance will be included in this category even though a family
assignment cannot be made.
[0019] Putative transporters in which no family member is an
established transporter. Putative transport protein families are
grouped under this number and will either be classified elsewhere
when the transport function of a member becomes established, or
will be eliminated from the TC classification system if the
proposed transport function is disproven. These families include a
member or members for which a transport function has been
suggested, but evidence for such a function is not yet
compelling.
[0020] Auxiliary transport proteins. Proteins that in some way
facilitate transport across one or more biological membranes but do
not themselves participate directly in transport are included in
this class. These proteins always function in conjunction with one
or more transport proteins. They may provide a function connected
with energy coupling to transport, play a structural role in
complex formation or serve a regulatory function.
[0021] Transporters of unknown classification. Transport protein
families of unknown classification are grouped under this number
and will be classified elsewhere when the transport process and
energy coupling mechanism are characterized. These families include
at least one member for which a transport function has been
established, but either the mode of transport or the energy
coupling mechanism is not known.
[0022] Ion Channels
[0023] An important type of transporter is the ion channel. Ion
channels regulate many different cell proliferation,
differentiation, and signaling processes by regulating the flow of
ions into and out of cells. Ion channels are found in the plasma
membranes of virtually every cell in eukaryotic organisms. Ion
channels mediate a variety of cellular functions including
regulation of membrane potentials and absorption and secretion of
ion across epithelial membranes. When present in intracellular
membranes of the Golgi apparatus and endocytic vesicles, ion
channels, such as chloride channels, also regulate organelle pH.
For a review, see Greger, R. (1988) Annu. Rev. Physiol.
50:111-122.
[0024] Ion channels are generally classified by structure and the
type of mode of action. For example, extracellular ligand gated
channels (ELGs) are comprised of five polypeptide subunits, with
each subunit having 4 membrane spanning domains, and are activated
by the binding of an extracellular ligand to the channel. In
addition, channels are sometimes classified by the ion type that is
transported, for example, chlorine channels, potassium channels,
etc. There may be many classes of channels for transporting a
single type of ion (a detailed review of channel types can be found
at Alexander, S. P. H. and J. A. Peters (1997). Receptor and ion
channel nomenclature supplement. Trends Pharmacol. Sci., Elsevier,
pp. 65-68 and
http://www-biology.ucsd.edu/.about.msaier/transport/toc.htm- l.
[0025] There are many types of ion channels based on structure. For
example, many ion channels fall within one of the following groups:
extracellular ligand-gated channels (ELG), intracellular
ligand-gated channels (ILG), inward rectifying channels (INR),
intercellular (gap junction) channels, and voltage gated channels
(VIC). There are additionally recognized other channel families
based on ion-type transported, cellular location and drug
sensitivity. Detailed information on each of these, their activity,
ligand type, ion type, disease association, drugability, and other
information pertinent to the present invention, is well known in
the art.
[0026] Extracellular ligand-gated channels, ELGs, are generally
comprised of five polypeptide subunits, Unwin, N. (1993), Cell 72:
31-41; Unwin, N. (1995), Nature 373: 3743; Hucho, F., et al.,
(1996) J. Neurochem. 66: 1781-1792; Hucho, F., et al., (1996) Eur.
J. Biochem. 239: 539-557; Alexander, S. P. H. and J. A. Peters
(1997), Trends Pharmacol. Sci., Elsevier, pp. 4-6; 36-40; 4244; and
Xue, H. (1998) J. Mol. Evol. 47: 323-333. Each subunit has 4
membrane spanning regions: this serves as a means of identifying
other members of the ELG family of proteins. ELG bind a ligand and
in response modulate the flow of ions. Examples of ELG include most
members of the neurotransmitter-receptor family of proteins, e.g.,
GABAI receptors. Other members of this family of ion channels
include glycine receptors, ryandyne receptors, and ligand gated
calcium channels.
[0027] The Voltage-gated Ion Channel (VIC) Superfamily
[0028] Proteins of the VIC family are ion-selective channel
proteins found in a wide range of bacteria, archaea and eukaryotes
Hille, B. (1992), Chapter 9: Structure of channel proteins; Chapter
20: Evolution and diversity. In: Ionic Channels of Excitable
Membranes, 2nd Ed., Sinaur Assoc. Inc., Pubs., Sunderland, Mass.;
Sigworth, F. J. (1993), Quart. Rev. Biophys. 27: 140; Salkoff, L.
and T. Jegla (1995), Neuron 15: 489492; Alexander, S. P. H. et al.,
(1997), Trends Pharmacol. Sci., Elsevier, pp. 76-84; Jan, L. Y. et
al., (1997), Annu. Rev. Neurosci. 20: 91-123; Doyle, D. A, et al.,
(1998) Science 280: 69-77; Terlau, H. and W. Stuhmer (1998),
Naturwissenschaften 85: 437-444. They are often homo- or
heterooligomeric structures with several dissimilar subunits (e.g.,
a1-a2-d-b Ca.sup.2+ channels, ab.sub.1b.sub.2 Na.sup.+ channels or
(a).sub.4-b K.sup.+ channels), but the channel and the primary
receptor is usually associated with the a (or a1) subunit.
Functionally characterized members are specific for K.sup.+,
Na.sup.+ or Ca.sup.2+. The K.sup.+ channels usually consist of
homotetrameric structures with each a-subunit possessing six
transmembrane spanners (TMSs). The al and a subunits of the
Ca.sup.2+ and Na.sup.+ channels, respectively, are about four times
as large and possess 4 units, each with 6 TMSs separated by a
hydrophilic loop, for a total of 24 TMSs. These large channel
proteins form heterotetra-unit structures equivalent to the
homotetrameric structures of most K.sup.+ channels. All four units
of the Ca.sup.2+ and Na.sup.+ channels are homologous to the single
unit in the homotetrameric K.sup.+ channels. Ion flux via the
eukaryotic channels is generally controlled by the transmembrane
electrical potential (hence the designation, voltage-sensitive)
although some are controlled by ligand or receptor binding.
[0029] Several putative K.sup.+-selective channel proteins of the
VIC family have been identified in prokaryotes. The structure of
one of them, the KcsA K.sup.+ channel of Streptomyces lividans, has
been solved to 3.2 .ANG. resolution. The protein possesses four
identical subunits, each with two transmembrane helices, arranged
in the shape of an inverted teepee or cone. The cone cradles the
"selectivity filter" P domain in its outer end. The narrow
selectivity filter is only 12 .ANG. long, whereas the remainder of
the channel is wider and lined with hydrophobic residues. A large
water-filled cavity and helix dipoles stabilize K.sup.+ in the
pore. The selectivity filter has two bound K.sup.+ ions about 7.5
.ANG. apart from each other. Ion conduction is proposed to result
from a balance of electrostatic attractive and repulsive
forces.
[0030] In eukaryotes, each VIC family channel type has several
subtypes based on pharmacological and electrophysiological data.
Thus, there are five types of Ca.sup.2+ channels (L, N, P, Q and
T). There are at least ten types of K.sup.+ channels, each
responding in different ways to different stimuli:
voltage-sensitive [Ka, Kv, Kvr, Kvs and Ksr], Ca.sup.2+-sensitive
[BK.sub.ca, IK.sub.Ca and SK.sub.ca] and receptor-coupled [K.sub.M
and K.sub.Ach]. There are at least six types of Na.sup.+ channels
(I, II, III, .mu.1, H1 and PN3). Tetrameric channels from both
prokaryotic and eukaryotic organisms are known in which each
a-subunit possesses 2 TMSs rather than 6, and these two TMSs are
homologous to TMSs 5 and 6 of the six TMS unit found in the
voltage-sensitive channel proteins. KcsA of S. lividans is an
example of such a 2 TMS channel protein. These channels may include
the K.sub.Na (Na.sup.+-activated) and K.sub.Vol (cell
volume-sensitive) K.sup.+ channels, as well as distantly related
channels such as the Tokl K.sup.+ channel of yeast, the TWIK-1
inward rectifier K.sup.+ channel of the mouse and the TREK-1
K.sup.+ channel of the mouse. Because of insufficient sequence
similarity with proteins of the VIC family, inward rectifier
K.sup.+ IRK channels (ATP-regulated; G-protein-activated) which
possess a P domain and two flanking TMSs are placed in a distinct
family. However, substantial sequence similarity in the P region
suggests that they are homologous. The b, g and d subunits of VIC
family members, when present, frequently play regulatory roles in
channel activation/deactivation.
[0031] The Epithelial Na.sup.+ Channel (ENaC) Family
[0032] The ENaC family consists of over twenty-four sequenced
proteins (Canessa, C. M., et al., (1994), Nature 367: 463-467, Le,
T. and M. H. Saier, Jr. (1996), Mol. Membr. Biol. 13: 149-157;
Garty, H. and L. G. Palmer (1997), Physiol. Rev. 77: 359-396;
Waldmann, R., et al., (1997), Nature 386: 173-177; Darboux, I., et
al., (1998), J. Biol. Chem. 273: 9424-9429; Firsov, D., et al.,
(1998), EMBO J. 17: 344-352; Horisberger, J.-D. (1998). Curr. Opin.
Struc. Biol. 10: 443-449). All are from animals with no
recognizable homologues in other eukaryotes or bacteria. The
vertebrate ENaC proteins from epithelial cells cluster tightly
together on the phylogenetic tree: voltage-insensitive ENaC
homologues are also found in the brain. Eleven sequenced C. elegans
proteins, including the degenerins, are distantly related to the
vertebrate proteins as well as to each other. At least some of
these proteins form part of a mechano-transducing complex for touch
sensitivity. The homologous Helix aspersa (FMRF-amide)-activated
Na.sup.+ channel is the first peptide neurotransmitter-gated
ionotropic receptor to be sequenced.
[0033] Protein members of this family all exhibit the same apparent
topology, each with N- and C-termini on the inside of the cell, two
amphipathic transmembrane spanning segments, and a large
extracellular loop. The extracellular domains contain numerous
highly conserved cysteine residues. They are proposed to serve a
receptor function.
[0034] Mammalian ENaC is important for the maintenance of Na.sup.+
balance and the regulation of blood pressure. Three homologous ENaC
subunits, alpha, beta, and gamma, have been shown to assemble to
form the highly Na.sup.+-selective channel. The stoichiometry of
the three subunits is alpha.sub.2, beta1, gammal in a
heterotetrameric architecture.
[0035] The Glutamate-gated Ion Channel (GIC) Family of
Neurotransmitter Receptors
[0036] Members of the GIC family are heteropentameric complexes in
which each of the 5 subunits is of 800-1000 amino acyl residues in
length (Nakanishi, N., et al, (1990), Neuron 5: 569-581; Unwin, N.
(1993), Cell 72: 3141; Alexander, S. P. H. and J. A. Peters (1997)
Trends Pharmacol. Sci., Elsevier, pp. 36-40). These subunits may
span the membrane three or five times as putative a-helices with
the N-termini (the glutamate-binding domains) localized
extracellularly and the C-termini localized cytoplasmically. They
may be distantly related to the ligand-gated ion channels, and if
so, they may possess substantial b-structure in their transmembrane
regions. However, homology between these two families cannot be
established on the basis of sequence comparisons alone. The
subunits fall into six subfamilies: a, b, g, d, e and z.
[0037] The GIC channels are divided into three types: (1)
a-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA)-, (2)
kainate- and (3) N-methyl-D-aspartate (NMDA)-selective glutamate
receptors. Subunits of the AMPA and kainate classes exhibit 35-40%
identity with each other while subunits of the NMDA receptors
exhibit 22-24% identity with the former subunits. They possess
large N-terminal, extracellular glutamate-binding domains that are
homologous to the periplasmic glutamine and glutamate receptors of
ABC-type uptake permeases of Gram-negative bacteria. All known
members of the GIC family are from animals. The different channel
(receptor) types exhibit distinct ion selectivities and conductance
properties. The NMDA-selective large conductance channels are
highly permeable to monovalent cations and Ca.sup.2+. The AMPA- and
kainate-selective ion channels are permeable primarily to
monovalent cations with only low permeability to Ca.sup.2+.
[0038] The Chloride Channel (ClC) Family
[0039] The ClC family is a large family consisting of dozens of
sequenced proteins derived from Gram-negative and Gram-positive
bacteria, cyanobacteria, archaea, yeast, plants and animals
(Steinmeyer, K., et al., (1991), Nature 354: 301-304; Uchida, S.,
et al., (1993), J. Biol. Chem. 268: 3821-3824; Huang, M.-E., et
al., (1994), J. Mol. Biol. 242: 595-598; Kawasaki, M., et al,
(1994), Neuron 12: 597-604; Fisher, W. E., et al., (1995),
Genomics. 29:598-606; and Foskett, J. K. (1998), Annu. Rev.
Physiol. 60: 689-717). These proteins are essentially ubiquitous,
although they are riot encoded within genomes of Haemophilus
influenzae, Mycoplasma genitalium, and Mycoplasma pneumoniae.
Sequenced proteins vary in size from 395 amino acyl residues (M.
jannaschii) to 988 residues (man). Several organisms contain
multiple ClC family paralogues. For example, Synechocystis has two
paralogues, one of 451 residues in length and the other of 899
residues. Arabidopsis thaliana has at least four sequenced
paralogues, (775-792 residues), humans also have at least five
paralogues (820-988 residues), and C. elegans also has at least
five (810-950 residues). There are nine known members in mammals,
and mutations in three of the corresponding genes cause human
diseases. E. coli, Methanococcus jannaschii and Saccharomyces
cerevisiae only have one ClC family member each. With the exception
of the larger Synechocystis paralogue, all bacterial proteins are
small (395-492 residues) while all eukaryotic proteins are larger
(687-988 residues). These proteins exhibit 10-12 putative
transmembrane a-helical spanners (TMSs) and appear to be present in
the membrane as homodimers. While one member of the family, Torpedo
ClC-O, has been reported to have two channels, one per subunit,
others are believed to have just one.
[0040] All functionally characterized members of the ClC family
transport chloride, some in a voltage-regulated process. These
channels serve a variety of physiological functions (cell volume
regulation; membrane potential stabilization; signal transduction;
transepithelial transport, etc.). Different homologues in humans
exhibit differing anion selectivities, i.e., ClC4 and ClC5 share a
NO.sub.3.sup.->Cl.sup.->- Br.sup.->I.sup.- conductance
sequence, while ClC3 has an I.sup.->Cl.sup.- selectivity. The
ClC4 and ClC5 channels and others exhibit outward rectifying
currents with currents only at voltages more positive than +20
mV.
[0041] Animal Inward Rectifier K.sup.+ Channel (IRK-C) Family
[0042] IRK channels possess the "minimal channel-forming structure"
with only a P domain, characteristic of the channel proteins of the
VIC family, and two flanking transmembrane spanners (Shuck, M. E.,
et al., (1994), J. Biol. Chem. 269: 24261-24270; Ashen, M. D., et
al., (1995), Am. J. Physiol. 268: H506-H511; Salkoff, L. and T.
Jegla (1995), Neuron 15: 489-492; Aguilar-Bryan, L., et al.,
(1998), Physiol. Rev. 78: 227-245; Ruknudin, A., et al., (1998), J.
Biol. Chem. 273: 14165-14171). They may exist in the membrane as
homo- or heterooligomers. They have a greater tendency to let
K.sup.+ flow into the cell than out. Voltage-dependence may be
regulated by external K.sup.+, by internal Mg.sup.2+, by internal
ATP and/or by G-proteins. The P domains of IRK channels exhibit
limited sequence similarity to those of the VIC family, but this
sequence similarity is insufficient to establish homology. Inward
rectifiers play a role in setting cellular membrane potentials, and
the closing of these channels upon depolarization permits the
occurrence of long duration action potentials with a plateau phase.
Inward rectifiers lack the intrinsic voltage sensing helices found
in VIC family channels. In a few cases, those of Kir1.1a and
Kir6.2, for example, direct interaction with a member of the ABC
superfamily has been proposed to confer unique functional and
regulatory properties to the heteromeric complex, including
sensitivity to ATP. The SUR1 sulfonylurea receptor (spQ09428) is
the ABC protein that regulates the Kir6.2 channel in response to
ATP, and CFTR may regulate Kir1.1a. Mutations in SUR1 are the cause
of familial persistent hyperinsulinemic hypoglycemia in infancy
(PHHI), an autosomal recessive disorder characterized by
unregulated insulin secretion in the pancreas.
[0043] ATP-gated Cation Channel (ACC) Family
[0044] Members of the ACC family (also called P2X receptors)
respond to ATP, a functional neurotransmitter released by
exocytosis from many types of neurons (North, R. A. (1996), Curr.
Opin. Cell Biol. 8: 474483; Soto, F., M. Garcia-Guzman and W.
Stuhmer (1997), J. Membr. Biol. 160: 91-100). They have been placed
into seven groups (P2X.sub.1-P2X.sub.7) based on their
pharmacological properties. These channels, which function at
neuron-neuron and neuron-smooth muscle junctions, may play roles in
the control of blood pressure and pain sensation. They may also
function in lymphocyte and platelet physiology. They are found only
in animals.
[0045] The proteins of the ACC family are quite similar in sequence
(>35% identity), but they possess 380-1000 amino acyl residues
per subunit with variability in length localized primarily to the
C-terminal domains. They possess two transmembrane spanners, one
about 30-50 residues from their N-termini, the other near residues
320-340. The extracellular receptor domains between these two
spanners (of about 270 residues) are well conserved with numerous
conserved glycyl and cysteyl residues. The hydrophilic C-termini
vary in length from 25 to 240 residues. They resemble the
topologically similar epithelial Na.sup.+ channel (ENaC) proteins
in possessing (a) N- and C-termini localized intracellularly, (b)
two putative transmembrane spanners, (c) a large extracellular loop
domain, and (d) many conserved extracellular cysteyl residues. ACC
family members are, however, not demonstrably homologous with them.
ACC channels are probably hetero- or homomultimers and transport
small monovalent cations (Me.sup.+). Some also transport Ca.sup.2+;
a few also transport small metabolites.
[0046] The Ryanodine-Inositol 1,4,5-triphosphate Receptor Ca.sup.2+
Channel (RIR-CaC) Family
[0047] Ryanodine (Ry)-sensitive and inositol 1,4,5-triphosphate
(IP3)-sensitive Ca.sup.2+-release channels function in the release
of Ca.sup.2+ from intracellular storage sites in animal cells and
thereby regulate various Ca.sup.2+-dependent physiological
processes (Hasan, G. et al., (1992) Development 116: 967-975;
Michikawa, T., et al., (1994), J. Biol. Chem. 269: 9184-9189;
Tunwell, R. E. A., (1996), Biochem. J. 318: 477487; Lee, A. G.
(1996) Biomembranes, Vol. 6, Transmembrane Receptors and Channels
(A. G. Lee, ed.), JAI Press, Denver, Colo., pp 291-326; Mikoshiba,
K., et al., (1996) J. Biochem. Biomem. 6: 273-289). Ry receptors
occur primarily in muscle cell sarcoplasmic reticular (SR)
membranes, and IP3 receptors occur primarily in brain cell
endoplasmic reticular (ER) membranes where they effect release of
Ca.sup.2+ into the cytoplasm upon activation (opening) of the
channel.
[0048] The Ry receptors are activated as a result of the activity
of dihydropyridine-sensitive Ca.sup.2+ channels. The latter are
members of the voltage-sensitive ion channel (VIC) family.
Dihydropyridine-sensitive channels are present in the T-tubular
systems of muscle tissues.
[0049] Ry receptors are homotetrameric complexes with each subunit
exhibiting a molecular size of over 500,000 daltons (about 5,000
amino acyl residues). They possess C-terminal domains with six
putative transmembrane a -helical spanners (TMSs). Putative
pore-forming sequences occur between the fifth and sixth TMSs as
suggested for members of the VIC family. The large N-terminal
hydrophilic domains and the small C-terminal hydrophilic domains
are localized to the cytoplasm. Low resolution 3-dimensional
structural data are available. Mammals possess at least three
isoforms that probably arose by gene duplication and divergence
before divergence of the mammalian species. Homologues are present
in humans and Caenorabditis elegans.
[0050] IP.sub.3 receptors resemble Ry receptors in many respects.
(1) They are homotetrameric complexes with each subunit exhibiting
a molecular size of over 300,000 daltons (about 2,700 amino acyl
residues). (2) They possess C-terminal channel domains that are
homologous to those of the Ry receptors. (3) The channel domains
possess six putative TMSs and a putative channel lining region
between TMSs 5 and 6. (4) Both the large N-terminal domains and the
smaller C-terminal tails face the cytoplasm. (5) They possess
covalently linked carbohydrate on extracytoplasmic loops of the
channel domains. (6) They have three currently recognized isoforms
(types 1, 2, and 3) in mammals which are subject to differential
regulation and have different tissue distributions.
[0051] IP.sub.3 receptors possess three domains: N-terminal
IP.sub.3-binding domains, central coupling or regulatory domains
and C-terminal channel domains. Channels are activated by IP.sub.3
binding, and like the Ry receptors, the activities of the IP.sub.3
receptor channels are regulated by phosphorylation of the
regulatory domains, catalyzed by various protein kinases. They
predominate in the endoplasmic reticular membranes of various cell
types in the brain but have also been found in the plasma membranes
of some nerve cells derived from a variety of tissues.
[0052] The channel domains of the Ry and IP.sub.3 receptors
comprise a coherent family that in spite of apparent structural
similarities, do not show appreciable sequence similarity of the
proteins of the VIC family. The Ry receptors and the IP.sub.3
receptors cluster separately on the RIR-CaC family tree. They both
have homologues in Drosophila. Based on the phylogenetic tree for
the family, the family probably evolved in the following sequence:
(1) A gene duplication event occurred that gave rise to Ry and
IP.sub.3 receptors in invertebrates. (2) Vertebrates evolved from
invertebrates. (3) The three isoforms of each receptor arose as a
result of two distinct gene duplication events. (4) These isoforms
were transmitted to mammals before divergence of the mammalian
species.
[0053] The Organellar Chloride Channel (O-ClC) Family
[0054] Proteins of the O-ClC family are voltage-sensitive chloride
channels found in intracellular membranes but not the plasma
membranes of animal cells (Landry, D, et al., (1993), J. Biol.
Chem. 268: 14948-14955; Valenzuela, Set al., (1997), J. Biol. Chem.
272: 12575-12582; and Duncan, R. R., et al., (1997), J. Biol. Chem.
272: 23880-23886).
[0055] They are found in human nuclear membranes, and the bovine
protein targets to the microsomes, but not the plasma membrane,
when expressed in Xenopus laevis oocytes. These proteins are
thought to function in the regulation of the membrane potential and
in transepithelial ion absorption and secretion in the kidney. They
possess two putative transmembrane a-helical spanners (TMSs) with
cytoplasmic N- and C-termini and a large luminal loop that may be
glycosylated. The bovine protein is 437 amino acyl residues in
length and has the two putative TMSs at positions 223-239 and
367-385. The human nuclear protein is much smaller (241 residues).
A C. elegans homologue is 260 residues long.
[0056] Sugar Transporter
[0057] Organic substrates (sugars, amino acids, carboxylic acids
and neutrotransmitters) are actively transported into eukaryotic
cells by Na+ co-transport. Some of the transport proteins have been
identified--for example, intestinal brush border Na+/glucose and
Na.sup.+/proline transporters and the brain Na+/CI-/GABA
transporter--and progress has been made in locating their active
sites and probing their conformational states. The archetypical
Na+-driven transporter is the intestinal brush border Na+/glucose
co-transporter, and a defect in the co-transporter is the origin of
the congenital glucose-galactose malabsorption syndrome.
[0058] Cotransporters are a major class of membrane
proteins--typically with 13 menbrane spanning helices. They cause
the concentration of molecules across a membrane--nutrients,
neurotransmitters, osmolytes and ions. For example there are co
transporters for amino acids, sugars, nucleosides and vitamins.
[0059] Na+/glucose co transporter (SGLT1 ) was reported in 1960 by
Bob Crane. Sodium dependent glucose transport occurs in both the
kidney and the intestine of animals. Both of these transporters
show a close similarity to each other.
[0060] These transporters are reported to be multifunctional and
have been shown to operate in 4 ways: 1) Uncoupled passive Na+
transport, 2) Downhill water transport, 3) Na+ and substrate
transport, 4) Na+, water and substrate transport. For further
information regarding to the present invention, see Matsuo et al.,
Biochem Biophys Res Commun Sep. 8, 1997 ;238(1):126-9.
[0061] Hexose transport into mammalian cells is catalyzed by
members of a small family of 44- to 55-kD membrane proteins that
have specific functions and differ in their tissue distribution.
Observed hexose transporters have 12 membrane-spanning helices and
a number of critical conserved residues. By EST database searching
for clones containing conserved GLUT sequences, followed by
screening of rat tissues and 5-prime RACE, Ibberson et al. and
Doege et al. identified rodent and human cDNAs encoding a novel
glucose transporter. (Ibberson, M., et al., J. Biol. Chem. 275:
4607-4612, 2000, PubMed ID: 10671487; and Doege, H., et al., J.
Biol. Chem. 275: 16275-16280, 2000, PubMed ID: 10821868) The human
cDNA encodes a deduced 477-amino acid protein, designated GLUT8 or
GLUTX1, that shares 85% sequence homology with the mouse sequence.
Ibberson et al. found that the approximately 37-kD rat Glutx1
expressed in frog oocytes is unable to take up glucose unless the
N-terminal dileucine motif, which may serve as an internalization
signal, is mutated to alanines. Immunofluorescence analysis
demonstrated that Glutx1 is expressed intracellularly, whereas
Glutx1(LL-AA) is expressed on the plasma membrane. In apparent
contrast, Doege et al. found that membrane preparations from cells
expressing GLUT8 cannot bind cytochalasin B in the presence of
glucose and, when reconstituted in liposomes, have increased
D-glucose transport activity. By Western blot analysis, Doege et
al. determined that human GLUT8 is expressed as a 42-kD protein.
Northern blot analysis revealed expression of a 2.4-kb transcript,
with strongest expression in testis and moderate expression in
other tissues except thyroid. In addition, Doege et al. found that
GLUT8 was not detectable in 2 patients with testicular carcinoma or
in testicular tissue of 4 patients treated with estrogen. They
found that Glut8 mRNA was detectable in testis from pubertal and
adult, but not prepubertal, rats
[0062] Glucose transport activity in early preimplantation mouse
embryos had been attributed to the known facilitative glucose
transporters GLUT1 (SLC2A1; 138140), GLUT2 (SLC2A2; 138160), and
GLUT3 (SLC2A3; 138170). GLUT1 is present throughout the
preimplantation period, which begins with the 1-cell embryo and
ends with the blastocyst stage. GLUT2 and GLUT3 are first expressed
at a late 8-cell stage and remain present for the rest of the
preimplantation period. The simultaneous appearance of all 3
transporters corresponds to the critical time in mammalian
development when an embryonic fuel metabolism switches from the
oxidation of lactate and pyruvate via the Krebs cycle and oxidative
phosphorylation to anaerobic metabolism of glucose via glycolysis.
Mammalian preimplantation blastocysts exhibit insulin-stimulated
glucose uptake despite the absence of the only known
insulin-regulated transporter, GLUT4 (SLC2A4; 138190).
Carayannopoulos et al. found that mouse Glut8 exhibits 20 to 25%
amino acid sequence identity with Glutl, Glut3, and Glut4.
(Carayannopoulos, M. O., et al., Proc. Nat. Acad. Sci. 97:
7313-7318, 2000, PubMed ID: 10860996) Insulin induced a change in
the intracellular localization of this protein, which translated
into increased glucose uptake into the blastocyst, a process that
was inhibited by antisense oligoprobes. The presence of this
transporter may be necessary for successful blastocyst development,
fuel metabolism, and subsequent implantation. The existence of an
alternative transporter may explain examples in other tissues of
insulin-regulated glucose transport in the absence of Glut4
[0063] Doege et al. noted that the International Radiation Hybrid
Mapping Consortium localized the GLUT8 gene to chromosome 9
(A005N15).
[0064] Transporter proteins, particularly members of the sugar
transporter subfamily, are a major target for drug action and
development. Accordingly, it is valuable to the field of
pharmaceutical development to identify and characterize previously
unknown transport proteins. The present invention advances the
state of the art by providing previously unidentified human
transport proteins.
SUMMARY OF THE INVENTION
[0065] The present invention is based in part on the identification
of amino acid sequences of human transporter peptides and proteins
that are related to the sugar transporter subfamily, as well as
allelic variants and other mammalian orthologs thereof. These
unique peptide sequences, and nucleic acid sequences that encode
these peptides, can be used as models for the development of human
therapeutic targets, aid in the identification of therapeutic
proteins, and serve as targets for the development of human
therapeutic agents that modulate transporter activity in cells and
tissues that express the transporter. Experimental data as provided
in FIG. 1 indicates expression in ovary (adenocarcinoma tissue),
uterus (leiomyosarcoma tissue), cervix, kidney, kidney cancer
tissue (hypemephroma), germinal center B cell, colon, and infant
brain.
DESCRIPTION OF THE FIGURE SHEETS
[0066] FIG. 1 provides the nucleotide sequence of cDNA molecules or
transcript sequences that encode the transporter proteins of the
present invention. In addition structure and functional information
is provided, such as ATG start, stop and tissue distribution, where
available, that allows one to readily determine specific uses of
inventions based on this molecular sequence. Experimental data as
provided in FIG. 1 indicates expression in ovary (adenocarcinoma
tissue), uterus (leiomyosarcoma tissue), cervix, kidney, kidney
cancer tissue (hypemephroma), germinal center B cell, colon, and
infant brain.
[0067] FIG. 2 provides the predicted amino acid sequence of the
transporter of the present invention. In addition structure and
functional information such as protein family, function, and
modification sites is provided where available, allowing one to
readily determine specific uses of inventions based on this
molecular sequence.
[0068] FIG. 3 provides genomic sequences that span the gene
encoding the transporter protein of the present invention. In
addition structure and functional information, such as intron/exon
structure, promoter location, etc., is provided where available,
allowing one to readily determine specific uses of inventions based
on this molecular sequence. As illustrated in FIG. 3, SNPs,
including insertion/deletion variants ("indels"), were identified
at 42 different nucleotide positions.
DETAILED DESCRIPTION OF THE INVENTION
[0069] General Description
[0070] The present invention is based on the sequencing of the
human genome. During the sequencing and assembly of the human
genome, analysis of the sequence information revealed previously
unidentified fragments of the human genome that encode peptides
that share structural and/or sequence homology to
protein/peptide/domains identified and characterized within the art
as being a transporter protein or part of a transporter protein and
are related to the sugar transporter subfamily. Utilizing these
sequences, additional genomic sequences were assembled and
transcript and/or cDNA sequences were isolated and characterized.
Based on this analysis, the present invention provides amino acid
sequences of human transporter peptides and proteins that are
related to the sugar transporter subfamily, nucleic acid sequences
in the form of transcript sequences, cDNA sequences and/or genomic
sequences that encode these transporter peptides and proteins,
nucleic acid variation (allelic information), tissue distribution
of expression, and information about the closest art known
protein/peptide/domain that has structural or sequence homology to
the transporter of the present invention.
[0071] In addition to being previously unknown, the peptides that
are provided in the present invention are selected based on their
ability to be used for the development of commercially important
products and services. Specifically, the present peptides are
selected based on homology and/or structural relatedness to known
transporter proteins of the sugar transporter subfamily and the
expression pattern observed. Experimental data as provided in FIG.
1 indicates expression in ovary (adenocarcinoma tissue), uterus
(leiomyosarcoma tissue), cervix, kidney, kidney cancer tissue
(hypemephroma), germinal center B cell, colon, and infant brain.
The art has clearly established the commercial importance of
members of this family of proteins and proteins that have
expression patterns similar to that of the present gene. Some of
the more specific features of the peptides of the present
invention, and the uses thereof, are described herein, particularly
in the Background of the Invention and in the annotation provided
in the Figures, and/or are known within the art for each of the
known sugar transporter family or subfamily of transporter
proteins.
[0072] Specific Embodiments
[0073] Peptide Molecules
[0074] The present invention provides nucleic acid sequences that
encode protein molecules that have been identified as being members
of the transporter family of proteins and are related to the sugar
transporter subfamily (protein sequences are provided in FIG. 2,
transcript/cDNA sequences are provided in FIG. 1 and genomic
sequences are provided in FIG. 3). The peptide sequences provided
in FIG. 2, as well as the obvious variants described herein,
particularly allelic variants as identified herein and using the
information in FIG. 3, will be referred herein as the transporter
peptides of the present invention, transporter peptides, or
peptides/proteins of the present invention.
[0075] The present invention provides isolated peptide and protein
molecules that consist of, consist essentially of, or comprising
the amino acid sequences of the transporter peptides disclosed in
the FIG. 2, (encoded by the nucleic acid molecule shown in FIG. 1,
transcript/cDNA or FIG. 3, genomic sequence), as well as all
obvious variants of these peptides that are within the art to make
and use. Some of these variants are described in detail below.
[0076] As used herein, a peptide is said to be "isolated" or
"purified" when it is substantially free of cellular material or
free of chemical precursors or other chemicals. The peptides of the
present invention can be purified to homogeneity or other degrees
of purity. The level of purification will be based on the intended
use. The critical feature is that the preparation allows for the
desired function of the peptide, even if in the presence of
considerable amounts of other components (the features of an
isolated nucleic acid molecule is discussed below).
[0077] In some uses, "substantially free of cellular material"
includes preparations of the peptide having less than about 30% (by
dry weight) other proteins (i.e., contaminating protein), less than
about 20% other proteins, less than about 10% other proteins, or
less than about 5% other proteins. When the peptide is
recombinantly produced, it can also be substantially free of
culture medium, i.e., culture medium represents less than about 20%
of the volume of the protein preparation.
[0078] The language "substantially free of chemical precursors or
other chemicals" includes preparations of the peptide in which it
is separated from chemical precursors or other chemicals that are
involved in its synthesis. In one embodiment, the language
"substantially free of chemical precursors or other chemicals"
includes preparations of the transporter peptide having less than
about 30% (by dry weight) chemical precursors or other chemicals,
less than about 20% chemical precursors or other chemicals, less
than about 10% chemical precursors or other chemicals, or less than
about 5% chemical precursors or other chemicals.
[0079] The isolated transporter peptide can be purified from cells
that naturally express it, purified from cells that have been
altered to express it (recombinant), or synthesized using known
protein synthesis methods. Experimental data as provided in FIG. 1
indicates expression in ovary (adenocarcinoma tissue), uterus
(leiomyosarcoma tissue), cervix, kidney, kidney cancer tissue
(hypernephroma), germinal center B cell, colon, and infant brain.
For example, a nucleic acid molecule encoding the transporter
peptide is cloned into an expression vector, the expression vector
introduced into a host cell and the protein expressed in the host
cell. The protein can then be isolated from the cells by an
appropriate purification scheme using standard protein purification
techniques. Many of these techniques are described in detail
below.
[0080] Accordingly, the present invention provides proteins that
consist of the amino acid sequences provided in FIG. 2 (SEQ ID NO:3
and SEQ ID NO:4), for example, proteins encoded by the
transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO:1
and SEQ ID NO:2) and the genomic sequences provided in FIG. 3 (SEQ
ID NO:5). The amino acid sequence of such a protein is provided in
FIG. 2. A protein consists of an amino acid sequence when the amino
acid sequence is the final amino acid sequence of the protein.
[0081] The present invention further provides proteins that consist
essentially of the amino acid sequences provided in FIG. 2 (SEQ ID
NO:3 and SEQ ID NO:4), for example, proteins encoded by the
transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO:1
and SEQ ID NO:2) and the genomic sequences provided in FIG. 3 (SEQ
ID NO:5). A protein consists essentially of an amino acid sequence
when such an amino acid sequence is present with only a few
additional amino acid residues, for example from about 1 to about
100 or so additional residues, typically from 1 to about 20
additional residues in the final protein.
[0082] The present invention further provides proteins that
comprise the amino acid sequences provided in FIG. 2 (SEQ ID NO:3
and SEQ ID NO:4), for example, proteins encoded by the
transcript/cDNA nucleic acid sequences shown in FIG. 1 (SEQ ID NO:1
and SEQ ID NO:2) and the genomic sequences provided in FIG. 3 (SEQ
ID NO:5). A protein comprises an amino acid sequence when the amino
acid sequence is at least part of the final amino acid sequence of
the protein. In such a fashion, the protein can be only the peptide
or have additional amino acid molecules, such as amino acid
residues (contiguous encoded sequence) that are naturally
associated with it or heterologous amino acid residues/peptide
sequences. Such a protein can have a few additional amino acid
residues or can comprise several hundred or more additional amino
acids. The preferred classes of proteins that are comprised of the
transporter peptides of the present invention are the naturally
occurring mature proteins. A brief description of how various types
of these proteins can be made/isolated is provided below.
[0083] The transporter peptides of the present invention can be
attached to heterologous sequences to form chimeric or fusion
proteins. Such chimeric and fusion proteins comprise a transporter
peptide operatively linked to a heterologous protein having an
amino acid sequence not substantially homologous to the transporter
peptide. "Operatively linked" indicates that the transporter
peptide and the heterologous protein are fused in-frame. The
heterologous protein can be fused to the N-terminus or C-terminus
of the transporter peptide.
[0084] In some uses, the fusion protein does not affect the
activity of the transporter peptide per se. For example, the fusion
protein can include, but is not limited to, enzymatic fusion
proteins, for example beta-galactosidase fusions, yeast two-hybrid
GAL fusions, poly-His fusions, MYC-tagged, HI-tagged and Ig
fusions. Such fusion proteins, particularly poly-His fusions, can
facilitate the purification of recombinant transporter peptide. In
certain host cells (e.g., mammalian host cells), expression and/or
secretion of a protein can be increased by using a heterologous
signal sequence.
[0085] A chimeric or fusion protein can be produced by standard
recombinant DNA techniques. For example, DNA fragments coding for
the different protein sequences are ligated together in-frame in
accordance with conventional techniques. In another embodiment, the
fusion gene can be synthesized by conventional techniques including
automated DNA synthesizers. Alternatively, PCR amplification of
gene fragments can be carried out using anchor primers which give
rise to complementary overhangs between two consecutive gene
fragments which can subsequently be annealed and re-amplified to
generate a chimeric gene sequence (see Ausubel et al., Current
Protocols in Molecular Biology, 1992). Moreover, many expression
vectors are commercially available that already encode a fusion
moiety (e.g., a GST protein). A transporter peptide-encoding
nucleic acid can be cloned into such an expression vector such that
the fusion moiety is linked in-frame to the transporter
peptide.
[0086] As mentioned above, the present invention also provides and
enables obvious variants of the amino acid sequence of the proteins
of the present invention, such as naturally occurring mature forms
of the peptide, allelic/sequence variants of the peptides,
non-naturally occurring recombinantly derived variants of the
peptides, and orthologs and paralogs of the peptides. Such variants
can readily be generated using art-known techniques in the fields
of recombinant nucleic acid technology and protein biochemistry. It
is understood, however, that variants exclude any amino acid
sequences disclosed prior to the invention.
[0087] Such variantsican readily be identified/made using molecular
techniques and the sequence information disclosed herein. Further,
such variants can readily be distinguished from other peptides
based on sequence and/or structural homology to the transporter
peptides of the present invention. The degree of homology/identity
present will be based primarily on whether the peptide is a
functional variant or non-functional variant, the amount of
divergence present in the paralog family and the evolutionary
distance between the orthologs.
[0088] To determine the percent identity of two amino acid
sequences or two nucleic acid sequences, the sequences are aligned
for optimal comparison purposes (e.g., gaps can be introduced in
one or both of a first and a second amino acid or nucleic acid
sequence for optimal alignment and non-homologous sequences can be
disregarded for comparison purposes). In a preferred embodiment, at
least 30%, 40%, 50%, 60%, 70%, 80%, or 90% or more of a reference
sequence is aligned for comparison purposes. The amino acid
residues or nucleotides at corresponding amino acid positions or
nucleotide positions are then compared. When a position in the
first sequence is occupied by the same amino acid residue or
nucleotide as the corresponding position in the second sequence,
then the molecules are identical at that position (as used herein
amino acid or nucleic acid "identity" is equivalent to amino acid
or nucleic acid "homology"). The percent identity between the two
sequences is a function of the number of identical positions shared
by the sequences, taking into account the number of gaps, and the
length of each gap, which need to be introduced for optimal
alignment of the two sequences.
[0089] The comparison of sequences and determination of percent
identity and similarity between two sequences can be accomplished
using a mathematical algorithm. (Computational Molecular Biology,
Lesk, A. M., ed., Oxford University Press, New York, 1988;
Biocomputing: Informatics and Genome Projects, Smith, D. W., ed.,
Academic Press, New York, 1993; Computer Analysis of Sequence Data,
Part 1, Griffin, A. M., and Griffin, H. G., eds., Humana Press, New
Jersey, 1994; Sequence Analysis in Molecular Biology, von Heinje,
G., Academic Press, 1987; and Sequence Analysis Primer, Gribskov,
M. and Devereux, J., eds., M Stockton Press, New York, 1991). In a
preferred embodiment, the percent identity between two amino acid
sequences is determined using the Needleman and Wunsch (J. Mol.
Biol. (48):444-453 (1970)) algorithm which has been incorporated
into the GAP program in the GCG software package (available at
http://www.gcg.com), using either a Blossom 62 matrix or a PAM250
matrix, and a gap weight of 16, 14, 12, 10, 8, 6, or 4 and a length
weight of 1, 2, 3, 4, 5, or 6. In yet another preferred embodiment,
the percent identity between two nucleotide sequences is
determined:using the GAP program in the GCG software package
(Devereux, J., et al., Nucleic Acids Res. 12(1):387 (1984))
(available at http://www.gcg.com), using a NWSgapdna.CMP matrix and
a gap weight of 40, 50, 60, 70, or 80 and a length weight of 1, 2,
3, 4, 5, or 6. In another embodiment, the percent identity between
two amino acid or nucleotide sequences is determined using the
algorithm of E. Myers and W. Miller (CABIOS, 4:11-17 (1989)) which
has been. incorporated into the ALIGN program (version 2.0), using
a PAM120 weight residue table, a gap length penalty of 12 and a gap
penalty of 4.
[0090] The nucleic acid and protein sequences of the present
invention can further be used as a "query sequence" to perform a
search against sequence databases to, for example, identify other
family members or related sequences. Such searches can be performed
using the NBLAST and XBLAST programs (version 2.0) of Altschul, et
al. (J. Mol. Biol. 215:403-10 (1990)). BLAST nucleotide searches
can be performed with the NBLAST program, score=100, wordlength=12
to obtain nucleotide sequences homologous to the nucleic acid
molecules of the invention. BLAST protein searches can be performed
with the XBLAST program, score=50, wordlength=3 to obtain amino
acid sequences homologous to the proteins of the invention. To
obtain gapped alignments for comparison purposes, Gapped BLAST can
be utilized as described in Altschul et al. (Nucleic Acids Res.
25(17):3389-3402 (1997)). When utilizing BLAST and gapped BLAST
programs, the default parameters of the respective programs (e.g.,
XBLAST and NBLAST) can be used.
[0091] Full-length pre-processed forms, as well as mature processed
forms, of proteins that comprise one of the peptides of the present
invention can readily be identified as having complete sequence
identity to one of the transporter peptides of the present
invention as well as being encoded by the same genetic locus as the
transporter peptide provided herein. As indicated by the data
presented in FIG. 3, the map position was determined to be on
chromosome 1.
[0092] Allelic variants of a transporter peptide can readily be
identified as being a human protein having a high degree
(significant) of sequence homology/identity to at least a portion
of the transporter peptide as well as being encoded by the same
genetic locus as the transporter peptide provided herein. Genetic
locus can readily be determined based on the genomic information
provided in FIG. 3, such as the genomic sequence mapped to the
reference human. As indicated by the data presented in FIG. 3, the
map position was determined to be on chromosome 1. As used herein,
two proteins (or a region of the proteins) have significant
homology when the amino acid sequences are typically at least about
70-80%, 80-90%, and more typically at least about 90-95% or more
homologous. A significantly homologous amino acid sequence,
according to the present invention, will be encoded by a nucleic
acid sequence that will hybridize to a transporter peptide encoding
nucleic acid molecule under stringent conditions as more fully
described below.
[0093] FIG. 3 provides information on SNPs that have been found in
the gene encoding the transporter protein of the present invention.
SNPs were identified at 42 different nucleotide positions in
introns and regions 5' and 3' of the ORF. Such SNPs in introns and
outside the ORF may affect control/regulatory elements. Two SNPs in
exons, of which 1 of these cause changes in the amino acid sequence
(i.e., nonsynbnymous SNPs). The changes in the amino acid sequence
that these SNPs cause is indicated in FIG. 3 and can readily be
determined using the universal genetic code and the protein
sequence provided in FIG. 2 as a reference.
[0094] Paralogs of a transporter peptide can readily be identified
as having some degree of significant sequence homology/identity to
at least a portion of the transporter peptide, as being encoded by
a gene from humans, and as having similar activity or function. Two
proteins will typically be considered paralogs when the amino acid
sequences are typically at least about 60% or greater, and more
typically at least about 70% or greater homology through a given
region or domain. Such paralogs will be encoded by a nucleic acid
sequence that will hybridize to a transporter peptide encoding
nucleic acid molecule under moderate to stringent conditions as
more fully described below.
[0095] Orthologs of a transporter peptide can readily be identified
as having some degree of significant sequence homology/identity to
at least a portion of the transporter peptide as well as being
encoded by a gene from another organism. Preferred orthologs will
be isolated from mammals, preferably primates, for the development
of human therapeutic targets and agents. Such orthologs will be
encoded by a nucleic acid sequence that will hybridize to a
transporter peptide encoding nucleic acid molecule under moderate
to stringent conditions, as more fully described below, depending
on the degree of relatedness of the two organisms yielding the
proteins.
[0096] Non-naturally occurring variants of the transporter peptides
of the present invention can readily be generated using recombinant
techniques. Such variants include, but are not limited to
deletions, additions and substitutions in the amino acid sequence
of the transporter peptide. For example, one class of substitutions
are conserved amino acid substitution. Such substitutions are those
that substitute agiven amino acid in a transporter peptide by
another amino acid of like characteristics. Typically seen as
conservative substitutions are the replacements, one for another,
among the aliphatic amino acids Ala, Val, leu, and Ile; interchange
of the hydroxyl residues Serand Thr, exchange of the acidic
residues Asp and Glu; substitution between the amide residues Asn
and Gln; exchange of the basic residues Lys and Arg; and
replacements among the aromatic residues Phe and Tyr. Guidance
concerning which amino acid changes are likely to be phenotypically
silent are found in Bowie et al., Science 247:1306-1310 (1990).
[0097] Variant transporter peptides can be fully functional or can
lack function in one or more activities, e.g. ability to bind
ligand, ability to transport ligand, ability to mediate signaling,
etc. Fully functional variants typically contain only conservative
variation or variation in non-critical residues or in non-critical
regions. FIG. 2 provides the result of protein analysis and can be
used to identify critical domains/regions. Functional variants can
also contain substitution of similar amino acids that result in no
change or an insignificant change in function. Alternatively, such
substitutions may positively or negatively affect function to some
degree.
[0098] Non-functional variants typically contain one or more
non-conservative amino acid substitutions, deletions, insertions,
inversions, or truncation or a substitution, insertion, inversion,
or deletion in a critical residue or critical region.
[0099] Amino acids that are essential for function can be
identified by methods known in the art, such as site-directed
mutagenesis or alanine-scanning mutagenesis (Cunningham et al.,
Science 244:1081-1085 (1989)), particularly using the results
provided in FIG. 2. The latter procedure introduces single alanine
mutations at every residue in the molecule. The resulting mutant
molecules are then tested for biological activity such as
transporter activity or in assays such as an in vitro proliferative
activity. Sites that are critical for binding partner/substrate
binding can also be determined by structural analysis such as
crystallization, nuclear magnetic resonance or photoaffinity
labeling (Smith et al., J. Mol. Biol. 224:899-904 (1992); de Vos et
al. Science 255:306-312 (1992)).
[0100] The present invention further provides fragments of the
transporter peptides, in addition to proteins and peptides that
comprise and consist of such fragments, particularly those
comprising the residues identified in FIG. 2. The fragments to
which the invention pertains, however, are not to be construed as
encompassing fragments that may be disclosed publicly prior to the
present invention.
[0101] As used herein, a fragment comprises at least 8, 10, 12, 14,
16, or more contiguous amino acid residues from a transporter
peptide. Such fragments can be chosen based on the ability to
retain one or more of the biological activities of the transporter
peptide or could be chosen for the ability to perform a function,
e.g. bind a substrate or act as an immunogen. Particularly
important fragments are biologically active fragments, peptides
that are, for example, about 8 or more amino acids in length. Such
fragments will typically comprise a domain or motif of the
transporter peptide, e.g., active site, a transmembrane domain or a
substrate-binding domain. Further, possible fragments include, but
are not limited to, domain or motif containing fragments, soluble
peptide fragments, and fragments containing immunogenic structures.
Predicted domains and functional sites are readily identifiable by
computer programs well known and readily available to those of
skill in the art (e.g., PROSITE analysis). The results of one such
analysis are provided in FIG. 2.
[0102] Polypeptides often contain amino acids other than the 20
amino acids commonly referred to as the 20 naturally occurring
amino acids. Further, many amino acids, including the terminal
amino acids, may be modified by natural processes, such as
processing and other post-translational modifications, or by
chemical modification techniques well known in the art. Common
modifications that occur naturally in transporter peptides are
described in basic texts, detailed monographs, and the research
literature, and they are well known to those of skill in the art
(some of these features are identified in FIG. 2).
[0103] Known modifications include, but are not limited to,
acetylation, acylation, ADP-ribosylation, amidation, covalent
attachment of flavin, covalent attachment of a heme moiety,
covalent attachment of a nucleotide or nucleotide derivative,
covalent attachment of a lipid or lipid derivative, covalent
attachment of phosphotidylinositol, cross-linking, cyclization,
disulfide bond formation, demethylation, formation of covalent
crosslinks, formation of cystine, formation of pyroglutamate,
formylation, gamma carboxylation, glycosylation, GPI anchor
formation, hydroxylation, iodination, methylation, myristoylation,
oxidation, proteolytic processing, phosphorylation, prenylation,
racemization, selenoylation, sulfation, transfer-RNA mediated
addition of amino acids to proteins such as arginylation, and
ubiquitination.
[0104] Such modifications are well known to those of skill in the
art and have been described in great detail in the scientific
literature. Several particularly common modifications,
glycosylation, lipid attachment, sulfation, gamma-carboxylation of
glutamic acid residues, hydroxylation and ADP-ribosylation, for
instance, are described in most basic texts, such as
Proteins--Structure and Molecular Properties, 2nd Ed., T. E.
Creighton, W. H. Freeman and Company, New York (1993). Many
detailed reviews are available on this subject, such as by Wold,
F., Posttranslational Covalent Modification of Proteins, B. C.
Johnson, Ed., Academic Press, New York 1-12 (1983); Seifter et al.
(Meth, Enzymol. 182: 626-646 (1990)) and Rattan et al. (Ann. N.Y
Acad. Sci. 663:48-62 (1992)).
[0105] Accordingly, the transporter peptides of the present
invention also encompass derivatives or analogs in which a
substituted amino acid residue is not one encoded by the genetic
code, in which a substituent group is included, in which the mature
transporter peptide is fused with another compound, such as a
compound to increase the half-life of the transporter peptide (for
example, polyethylene glycol), or in which the additional amino
acids are fused to the mature transporter peptide, such as a leader
or secretory sequence or a sequence for purification of the mature
transporter peptide or a pro-protein sequence.
[0106] Protein/Peptide Uses
[0107] The proteins of the present invention can be used in
substantial and specific assays related to the functional
information provided in the Figures; to raise antibodies or to
elicit another immune response; as a reagent (including the labeled
reagent) in assays designed to quantitatively determine levels of
the protein (or its binding partner or ligand) in biological
fluids; and as markers for tissues in which the corresponding
protein is preferentially expressed (either constitutively or at a
particular stage of tissue differentiation or development or in a
disease state). Where the protein binds or potentially binds to
another protein or ligand (such as, for example, in a
transporter-effector protein interaction or transporter-ligand
interaction), the protein can be used to identify the binding
partner/ligand so as to develop a system to identify inhibitors of
the binding interaction. Any or all of these uses are capable of
being developed into reagent grade or kit format for
commercialization as commercial products.
[0108] Methods for performing the uses listed above are well known
to those skilled in the art. References disclosing such methods
include "Molecular Cloning: A Laboratory Manual", 2d ed., Cold
Spring Harbor Laboratory Press, Sambrook, J., E. F. Fritsch and T.
Maniatis eds., 1989, and "Methods in Enzymology: Guide to Molecular
Cloning Techniques", Academic Press, Berger, S. L. and A. R. Kimmel
eds., 1987.
[0109] Substantial chemical and structural homology exists between
the sugar transporter protein described herein and sugar
transporter expressed in the neonatal mouse hippocampus (see FIG.
1). As discussed in the background, sugar transporter expressed in
the neonatal mouse hippocampus are known in the art to be involved
in sugar absorption. Accordingly, the sugar transporter protein and
the encoding gene, provided by the present invention is useful for
treating, preventing, and/or diagnosing neuropsychatric disorders,
sigar malabsorption and other disorders associated with hippocampus
sugar transporter.
[0110] The potential uses of the peptides of the present invention
are based primarily on the source of the protein as well as the
class/action of the protein. For example, transporters isolated
from humans and their human/mammalian orthologs serve as targets
for identifying agents for use in mammalian therapeutic
applications, e.g. a human drug, particularly in modulating a
biological or pathological response in a cell or tissue that
expresses the transporter. Experimental data as provided in FIG. 1
indicates that the transporter protein of the present invention is
expressed in the ovary (adenocarcinoma tissue), uterus
(leiomyosarcoma tissue), cervix, kidney cancer tissue
(hypernephroma), germinal center B cell, colon, and infant brain by
a virtual northern blot. In addition, PCR-based tissue screening
panels indicate expression in kidney. A large percentage of
pharmaceutical agents are being developed that modulate the
activity of transporter proteins, particularly members of the sugar
transporter subfamily (see Background of the Invention). The
structural and functional information provided in the Background
and Figures provide specific and substantial uses for the molecules
of the present invention, particularly in combination with the
expression information provided in FIG. 1. Experimental data as
provided in FIG. 1 indicates expression in ovary (adenocarcinoma
tissue), uterus (leiomyosarcoma tissue), cervix, kidney, kidney
cancer tissue (hypernephroma), germinal center B cell, colon, and
infant brain. Such uses can readily be determined using the
information provided herein, that known in the art and routine
experimentation.
[0111] The proteins of the present invention (including variants
and fragments that may have been disclosed prior to the present
invention) are useful for biological assays related to transporters
that are related to members of the sugar transporter subfamily.
Such assays involve any of the known transporter functions or
activities or properties useful for diagnosis and treatment of
transporter-related conditions that are specific for the subfamily
of transporters that the one of the present invention belongs to,
particularly in cells and tissues that express the transporter.
Experimental data as provided in FIG. 1 indicates that the
transporter protein of the present invention is expressed in the
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney cancer tissue (hypernephroma), germinal center B
cell, colon, and infant brain by a virtual northern blot. In
addition, PCR-based tissue screening panels indicate expression in
kidney. The proteins of the present invention are also useful in
drug screening assays, in cell-based or cell-free systems
((Hodgson, Bio/technology, Sep. 10, 1992, (9);973-80). Cell-based
systems can be native, i.e., cells that normally express the
transporter, as a biopsy or expanded in cell culture. Experimental
data as provided in FIG. 1 indicates expression in ovary
(adenocarcinoma tissue), uterus (leiomyosarcoma tissue), cervix,
kidney, kidney cancer tissue (hypernephroma), germinal center B
cell, colon, and infant brain. In an alternate embodiment,
cell-based assays involve recombinant host cells expressing the
transporter protein.
[0112] The polypeptides can be used to identify compounds that
modulate transporter activity of the protein in its natural state
or an altered form that causes a specific disease or pathology
associated with the transporter. Both the transporters of the
present invention and appropriate variants and fragments can be
used in high-throughput screens to assay candidate compounds for
the ability to bind to the transporter. These compounds can be
further screened against a functional transporter to determine the
effect of the compound on the transporter activity. Further, these
compounds can be tested in animal or invertebrate systems to
determine activity/effectiveness. Compounds can be identified that
activate (agonist) or inactivate (antagonist) the transporter to a
desired degree.
[0113] Further, the proteins of the present invention can be used
to screen a compound for the ability to stimulate or inhibit
interaction between the transporter protein and a molecule that
normally interacts with the transporter protein, e.g. a substrate
or a component of the signal pathway that the transporter protein
normally interacts (for example, another transporter). Such assays
typically include the steps of combining the transporter protein
with a candidate compound under conditions that allow the
transporter protein, or fragment, to interact with the target
molecule, and to detect the formation of a complex between the
protein and the target or to detect the biochemical consequence of
the interaction with the transporter protein and the target, such
as any of the associated effects of signal transduction such as
changes in membrane potential, protein phosphorylation, cAMP
turnover, and adenylate cyclase activation, etc.
[0114] Candidate compounds include, for example, 1) peptides such
as soluble peptides, including Ig-tailed fusion peptides and
members of random peptide libraries (see, e.g., Lam et al., Nature
354:82-84 (1991); Houghten et al., Nature 354:84-86 (1991)) and
combinatorial chemistry-derived molecular libraries made of D-
and/or L- configuration amino acids; 2) phosphopeptides (e.g.,
members of random and partially degenerate, directed phosphopeptide
libraries, see, e.g., Songyang et al., Cell 72:767-778 (1993)); 3)
antibodies (e.g., polyclonal, monoclonal, humanized,
anti-idiotypic, chimeric, and single chain antibodies as well as
Fab, F(ab').sub.2, Fab expression library fragments, and
epitope-binding fragments of antibodies); and 4) small organic and
inorganic molecules (e.g., molecules obtained from combinatorial
and natural product libraries).
[0115] One candidate compound is a soluble fragment of the receptor
that competes for ligand binding. Other candidate compounds include
mutant transporters or appropriate fragments containing mutations
that affect transporter function and thus compete for ligand.
Accordingly, a fragment that competes for ligand, for example with
a higher affinity, or a fragment that binds ligand but does not
allow release, is encompassed by the invention.
[0116] The invention further includes other end point assays to
identify compounds that modulate (stimulate or inhibit) transporter
activity. The assays typically involve an assay of events in the
signal transduction pathway that indicate transporter activity.
Thus, the transport of a ligand, change in cell membrane potential,
activation of a protein, a change in the expression of genes that
are up- or down-regulated in response to the transporter protein
dependent signal cascade can be assayed.
[0117] Any of the biological or biochemical functions mediated by
the transporter can be used as an endpoint assay. These include all
of the biochemical or biochemical/biological events described
herein, in the references cited herein, incorporated by reference
for these endpoint assay targets, and other functions known to
those of ordinary skill in the art or that can be readily
identified using the information provided in the Figures,
particularly FIG. 2. Specifically, a biological function of a cell
or tissues that expresses the transporter can be assayed.
Experimental data as provided in FIG. 1 indicates that the
transporter protein of the present invention is expressed in the
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney cancer tissue (hypemephroma), germinal center B
cell, colon, and infant brain by a virtual northern blot. In
addition, PCR-based tissue screening panels indicate expression in
kidney.
[0118] Binding andlor activating compounds can also be screened by
using chimeric transporter proteins in which the amino terminal
extracellular domain, or parts thereof, the entire transmembrane
domain or subregions, such as any of the seven transmembrane
segments or any of the intracellular or extracellular loops and the
carboxy terminal intracellular domain, or parts thereof, can be
replaced by heterologous domains or subregions. For example, a
ligand-binding region can be used that interacts with a different
ligand then that which is recognized by the native transporter.
Accordingly, a different set of signal transduction components is
available as an end-point assay for activation. This allows for
assays to be performed in other than the specific host cell from
which the transporter is derived.
[0119] The proteins of the present invention are also useful in
competition binding assays in methods designed to discover
compounds that interact with the transporter (e.g. binding partners
and/or ligands). Thus, a compound is exposed to a transporter
polypeptide under conditions that allow the compound to bind or to
otherwise interact with the polypeptide. Soluble transporter
polypeptide is also added to the mixture. If the test compound
interacts with the soluble transporter polypeptide, it decreases
the amount of complex formed or activity from the transporter
target. This type of assay is particularly useful in cases in which
compounds are sought that interact with specific regions of the
transporter. Thus, the soluble polypeptide that competes with the
target transporter region is designed to contain peptide sequences
corresponding to the region of interest.
[0120] To perform cell free drug screening assays, it is sometimes
desirable to immobilize either the transporter protein, or
fragment, or its target molecule to facilitate separation of
complexes from uncomplexed forms of one or both of the proteins, as
well as to accommodate automation of the assay.
[0121] Techniques for immobilizing proteins on matrices can be used
in the drug screening assays. In one embodiment, a fusion protein
can be provided which adds a domain that allows the protein to be
bound to a matrix. For example, glutathione-S-transferase fusion
proteins can be adsorbed onto glutathione sepharose beads (Sigma
Chemical, St. Louis, Mo.) or glutathione derivatized microtitre
plates, which are then combined with the cell lysates (e.g.,
.sup.35S-labeled) and the candidate compound, and the mixture
incubated under conditions conducive to complex formation (e.g., at
physiological conditions for salt and pH). Following incubation,
the beads are washed to remove any unbound label, and the matrix
immobilized and radiolabel determined directly, or in the
supernatant after the complexes are dissociated. Alternatively, the
complexes can be dissociated from the matrix, separated by
SDS-PAGE, and the level of transporter-binding protein found in the
bead fraction quantitated from the gel using standard
electrophoretic techniques. For example, either the polypeptide or
its target molecule can be immobilized utilizing conjugation of
biotin and streptavidin using techniques well known in the art.
Alternatively, antibodies reactive with the protein but which do
not interfere with binding of the protein to its target molecule
can be derivatized to the wells of the plate, and the protein
trapped in the wells by antibody conjugation. Preparations of a
transporter-binding protein and a candidate compound are incubated
in the transporter protein-presenting wells and the amount of
complex trapped in the well can be quantitated. Methods for
detecting such complexes, in addition to those described above for
the GST-immobilized complexes, include immunodetection of complexes
using antibodies reactive with the transporter protein target
molecule, or which are reactive with transporter protein and
compete with the target molecule, as well as enzyme-linked assays
which rely on detecting an enzymatic activity associated with the
target molecule.
[0122] Agents that modulate one of the transporters of the present
invention can be identified using one or more of the above assays,
alone or in combination. It is generally preferable to use a
cell-based or cell free system first and then confirm activity in
an animal or other model system. Such model systems are well known
in the art and can readily be employed in this context.
[0123] Modulators of transporter protein activity identified
according to these drug screening assays can be used to treat a
subject with a disorder mediated by the transporter pathway, by
treating cells or tissues that express the transporter.
Experimental data as provided in FIG. 1 indicates expression in
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney, kidney cancer tissue (hypernephroma), germinal
center B cell, colon, and infant brain. These methods of treatment
include the steps of administering a modulator of transporter
activity in a pharmaceutical composition to a subject in need of
such treatment, the modulator being identified as described
herein.
[0124] In yet another aspect of the invention, the transporter
proteins can be used as "bait proteins" in a two-hybrid assay or
three-hybrid assay (see, e.g., U.S. Pat. No. 5,283,317; Zervos et
al. (1993) Cell 72:223-232; Madura et al. (1993) J. Biol. Chem.
268:12046-12054; Bartel et al. (1993) Biotechniques 14:920-924;
Iwabuchi et al. (1993) Oncogene 8:1693-1696; and Brent WO94/10300),
to identify other proteins, which bind to or interact with the
transporter and are involved in transporter activity. Such
transporter-binding proteins are also likely to be involved in the
propagation of signals by the transporter proteins or transporter
targets as, for example, downstream elements of a
transporter-mediated signaling pathway. Alternatively, such
transporter-binding proteins are likely to be transporter
inhibitors.
[0125] The two-hybrid system is based on the modular nature of most
transcription factors, which consist of separable DNA-binding and
activation domains. Briefly, the assay utilizes two different DNA
constructs. In one construct, the gene that codes for a transporter
protein is fused to a gene encoding the DNA binding domain of a
known transcription factor (e.g., GAL-4). In the other construct, a
DNA sequence, from a library of DNA sequences, that encodes an
unidentified protein ("prey" or "sample") is fused to a gene that
codes for the activation domain of the known transcription factor.
If the "bait" and the "prey" proteins are able to interact, in
vivo, forming a transporter-dependent complex, the DNA-binding and
activation domains of the transcription factor are brought into
close proximity. This proximity allows transcription of a reporter
gene (e.g., LacZ) which is operably linked to a transcriptional
regulatory site responsive to the transcription factor. Expression
of the reporter gene can be detected and cell colonies containing
the functional transcription factor can be isolated and used to
obtain the cloned gene which encodes the protein which interacts
with the transporter protein.
[0126] This invention further pertains to novel agents identified
by the above-described screening assays. Accordingly, it is within
the scope of this invention to further use an agent identified as
described herein in an appropriate animal model. For example, an
agent identified as described herein (e.g., a
transporter-modulating agent, an antisense transporter nucleic acid
molecule, a transporter-specific antibody, or a transporter-binding
partner) can be used in an animal or other model to determine the
efficacy, toxicity, or side effects of treatment with such an
agent. Alternatively, an agent identified as described herein can
be used in an animal or other model to determine the mechanism of
action of such an agent. Furthermore, this invention pertains to
uses of novel agents identified by the above-described screening
assays for treatments as described herein.
[0127] The transporter proteins of the present invention are also
useful to provide a target for diagnosing a disease or
predisposition to disease mediated by the peptide. Accordingly, the
invention provides methods for detecting the presence, or levels
of, the protein (or encoding mRNA) in a cell, tissue, or organism.
Experimental data as provided in FIG. 1 indicates expression in
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney, kidney cancer tissue (hypemephroma), germinal
center B cell, colon, and infant brain. The method involves
contacting a biological sample with a compound capable of
interacting with the transporter protein such that the interaction
can be detected. Such an assay can be provided in a single
detection format or a multi-detection format such as an antibody
chip array.
[0128] One agent for detecting a protein in a sample is an antibody
capable of selectively binding to protein. A biological sample
includes tissues, cells and biological fluids isolated from a
subject, as well as tissues, cells and fluids present within a
subject.
[0129] The peptides of the present invention also provide targets
for diagnosing active protein activity, disease, or predisposition
to disease, in a patient having a variant peptide, particularly
activities and conditions that are known for other members of the
family of proteins to which the present one belongs. Thus, the
peptide can be isolated from a biological sample and assayed for
the presence of a genetic mutation that results in aberrant
peptide. This includes amino acid substitution, deletion,
insertion, rearrangement, (as the result of aberrant splicing
events), and inappropriate post-translational modification.
Analytic methods include altered electrophoretic mobility,
alteredtryptic peptide digest, altered transporter activity in
cell-based or cell-free assay, alteration in ligand or
antibody-binding pattern, altered isoelectric point, direct amino
acid sequencing, and any other of the known assay techniques useful
for detecting mutations in a protein. Such an assay can be provided
in a single detection format or a multi-detection format such as an
antibody chip array.
[0130] In vitro techniques for detection of peptide include enzyme
linked immunosorbent assays (EISAs), Western blots,
immunoprecipitations and immunofluorescence using a detection
reagent, such as an antibody or protein binding agent.
Alternatively, the peptide can be detected in vivo in a subject by
introducing into the subject a labeled anti-peptide antibody or
other types of detection agent. For example, the antibody can be
labeled with a radioactive marker whose presence and location in a
subject can be detected by standard imaging techniques.
Particularly useful are methods that detect the allelic variant of
a peptide expressed in a subject and methods which detect fragments
of a peptide in a sample.
[0131] The peptides are also useful in pharmacogenomic analysis.
Pharmacogenomics deal with clinically significant hereditary
variations in the response to drugs due to altered drug disposition
and abnormal action in affected persons. See, e.g., Eichelbaum, M.
(Clin. Exp. Pharmacol. Physiol. 23(10-11):983-985 (1996)), and
Linder, M. W. (Clin. Chem. 43(2):254-266 (1997)). The clinical
outcomes of these variations result in severe toxicity of
therapeutic drugs in certain individuals or therapeutic failure of
drugs in certain individuals as a result of individual variation in
metabolism. Thus, the genotype of the individual can determine the
way a therapeutic compound acts on the body or the way the body
metabolizes the compound. Further, the activity of drug
metabolizing enzymes effects both the intensity and duration of
drug action. Thus, the pharmacogenomics of the individual permit
the selection of effective compounds and effective dosages of such
compounds for prophylactic or therapeutic treatment based on the
individual's genotype. The discovery of genetic polymorphisms in
some drug metabolizing enzymes has explained why some patients do
not obtain the expected drug effects, show an exaggerated drug
effect, or experience serious toxicity from standard drug dosages.
Polymorphisms can be expressed in the phenotype of the extensive
metabolizer and the phenotype of the poor metabolizer. Accordingly,
genetic polymorphism may lead to allelic protein variants of the
transporter protein in which one or more of the transporter
functions in one population is different from those in another
population. The peptides thus allow a target to ascertain a genetic
predisposition that can affect treatment modality. Thus, in a
ligand-based treatment, polymorphism may give rise to amino
terminal extracellular domains and/or other ligand-binding regions
that are more or less active in ligand binding, and transporter
activation. Accordingly, ligand dosage would necessarily be
modified to maximize the therapeutic effect within a given
population containing a polymorphism. As an alternative to
genotyping, specific polymorphic peptides could be identified.
[0132] The peptides are also useful for treating a disorder
characterized by an absence of, inappropriate, or unwanted
expression of the protein. Experimental data as provided in FIG. 1
indicates expression in ovary (adenocarcinoma tissue), uterus
(leiomyosarcoma tissue), cervix, kidney, kidney cancer tissue
(hypemephroma), germinal center B cell, colon, and infant brain.
Accordingly, methods for treatment include the use of the
transporter protein or fragments.
[0133] Antibodies
[0134] The invention also provides antibodies that selectively bind
to one of the peptides of the present invention, a protein
comprising such a peptide, as well as variants and fragments
thereof. As used herein, an antibody selectively binds a target
peptide when it binds the target peptide and does not significantly
bind to unrelated proteins. An antibody is still considered to
selectively bind a peptide even if it also binds to other proteins
that are not substantially homologous with the target peptide so
long as such proteins share homology with a fragment or domain of
the peptide target of the antibody. In this case, it would be
understood that antibody binding to the peptide is still selective
despite some degree of cross-reactivity.
[0135] As used herein, an antibody is defined in terms consistent
with that recognized within the art: they are multi-subunit
proteins produced by a mammalian organism in response to an antigen
challenge. The antibodies of the present invention include
polyclonal antibodies and monoclonal antibodies, as well as
fragments of such antibodies, including, but not limited to, Fab or
F(ab').sub.2, and Fv fragments.
[0136] Many methods are known for generating and/or identifying
antibodies to a given target peptide. Several such methods are
described by Harlow, Antibodies, Cold Spring Harbor Press,
(1989).
[0137] In general, to generate antibodies, an isolated peptide is
used as an immunogen and is administered to a mammalian organism,
such as a rat, rabbit or mouse. The full-length protein, an
antigenic peptide fragment or a fusion protein can be used.
Particularly important fragments are those covering functional
domains, such as the domains identified in FIG. 2, and domain of
sequence homology or divergence amongst the family, such as those
that can readily be identified using protein alignment methods and
as presented in the Figures.
[0138] Antibodies are preferably prepared from regions or discrete
fragments of the transporter proteins. Antibodies can be prepared
from any region of the peptide as described herein. However,
preferred regions will include those involved in function/activity
and/or transporter/binding partner interaction. FIG. 2 can be used
to identify particularly important regions while sequence alignment
can be used to identify conserved and unique sequence
fragments.
[0139] An antigenic fragment will typically comprise at least 8
contiguous amino acid residues. The antigenic peptide can comprise,
however, at least 10, 12, 14, 16 or more amino acid residues. Such
fragments can be selected on a physical property, such as fragments
correspond to regions that are located on the surface of the
protein, e.g., hydrophilic regions or can be selected based on
sequence uniqueness (see FIG. 2).
[0140] Detection on an antibody of the present invention can be
facilitated by coupling (i.e., physically linking) the antibody to
a detectable substance. Examples of detectable substances include
various enzymes, prosthetic groups, fluorescent materials,
luminescent materials, bioluminescent materials, and radioactive
materials. Examples of suitable enzymes include horseradish
peroxidase, alkaline phosphatase, .beta.-galactosidase, or
acetylcholinesterase; examples of suitable prosthetic group
complexes include streptavidin/biotin and avidin/biotin; examples
of suitable fluorescent materials include umbelliferone,
fluorescein, fluorescein isothiocyanate, rhodamine,
dichlorotriazinylamine fluorescein, dansyl chloride or
phycoerythrin; an example of a luminescent material includes
luminol; examples of bioluminescent materials include luciferase,
luciferin, and aequorin, and examples of suitable radioactive
material include .sup.125I, .sup.131I, .sup.35S or .sup.3H.
[0141] Antibody Uses
[0142] The antibodies can be used to isolate one of the proteins of
the present invention by standard techniques, such as affinity
chromatography or immunoprecipitation. The antibodies can
facilitate the purification of the natural protein from cells and
recombinantly produced protein expressed in host cells. In
addition, such antibodies are useful to detect the presence of one
of the proteins of the present invention in cells or tissues to
determine the pattern of expression of the protein among various
tissues in an organism and over the course of normal development.
Experimental data as provided in FIG. 1 indicates that the
transporter protein of the present invention is expressed in the
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney cancer tissue (hypernephroma), germinal center B
cell, colon, and infant brain by a virtual northern blot. In
addition, PCR-based tissue screening panels indicate expression in
kidney. Further, such antibodies can be used to detect protein in
situ, in vitro, or in a cell lysate or supernatant in order to
evaluate the abundance and pattern of expression. Also, such
antibodies can be used to assess abnormal tissue distribution or
abnormal expression during development or progression of a
biological condition. Antibody detection of circulating fragments
of the full length protein can be used to identify turnover.
[0143] Further, the antibodies can be used to assess expression in
disease states such as in active stages of the disease or in an
individual with a predisposition toward disease related to the
protein's function. When a disorder is caused by an inappropriate
tissue distribution, developmental expression, level of expression
of the protein, or expressed/processed form, the antibody can be
prepared against the normal protein. Experimental data as provided
in FIG. 1 indicates expression in ovary (adenocarcinoma tissue),
uterus (leiomyosarcoma tissue), cervix, kidney, kidney cancer
tissue (hypernephroma), germinal center B cell, colon, and infant
brain. If a disorder is characterized by a specific mutation in the
protein, antibodies specific for this mutant protein can be used to
assay for the presence of the specific mutant protein.
[0144] The antibodies can also be used to assess normal and
aberrant subcellular localization of cells in the various tissues
in an organism. Experimental data as provided in FIG. 1 indicates
expression in ovary (adenocarcinoma tissue), uterus (leiomyosarcoma
tissue), cervix, kidney, kidney cancer tissue (hypernephroma),
germinal center B cell, colon, and infant brain. The diagnostic
uses can be applied, not only in genetic testing, but also in
monitoring a treatment modality. Accordingly, where treatment is
ultimately aimed at correcting expression level or the presence of
aberrant sequence and aberrant tissue distribution or developmental
expression, antibodies directed against the protein or relevant
fragments can be used to monitor therapeutic efficacy.
[0145] Additionally, antibodies are useful in pharmacogenomic
analysis. Thus, antibodies prepared against polymorphic proteins
can be used to identify individuals that require modified treatment
modalities. The antibodies are also useful as diagnostic tools as
an immunological marker for aberrant protein analyzed by
electrophoretic mobility, isoelectric point, tryptic peptide
digest, and other physical assays known to those in the art.
[0146] The antibodies are also useful for tissue typing.
Experimental data as provided in FIG. 1 indicates expression in
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney, kidney cancer tissue (hypemephroma), germinal
center B cell, colon, and infant brain. Thus, where a specific
protein has been correlated with expression in a specific tissue,
antibodies that are specific for this protein can be used to
identify a tissue type.
[0147] The antibodies are also useful for inhibiting protein
function, for example, blocking the binding of the transporter
peptide to a binding partner such as a ligand or protein binding
partner. These uses can also be applied in a therapeutic context in
which treatment involves inhibiting the protein's function. An
antibody can be used, for example, to block binding, thus
modulating (agonizing or antagonizing) the peptides activity.
Antibodies can be prepared against specific fragments containing
sites required for function or against intact protein that is
associated with a cell or cell membrane. See FIG. 2 for structural
information relating to the proteins of the present invention.
[0148] The invention also encompasses kits for using antibodies to
detect the presence of a protein in a biological sample. The kit
can comprise antibodies such as a labeled or labelable antibody and
a compound or agent for detecting protein in a biological sample;
means for determining the amount of protein in the sample; means
for comparing the amount of protein in the sample with a standard;
and instructions for use. Such a kit can be supplied to detect a
single protein or epitope or can be configured to detect one of a
multitude of epitopes, such as in an antibody detection array.
Arrays are described in detail below for nucleic acid arrays and
similar methods have been developed for antibody arrays.
[0149] Nucleic Acid Molecules
[0150] The present invention further provides isolated nucleic acid
molecules that encode a transporter peptide or protein of the
present invention (cDNA, transcript and genomic sequence). Such
nucleic acid molecules will consist of, consist essentially of, or
comprise a nucleotide sequence that encodes one of the transporter
peptides of the present invention, an allelic variant thereof, or
an ortholog or paralog thereof.
[0151] As used herein, an "isolated" nucleic acid molecule is one
that is separated from other nucleic acid present in the natural
source of the nucleic acid. Preferably, an "isolated" nucleic acid
is free of sequences that naturally flank the nucleic acid (i.e.,
sequences located at the 5' and 3' ends of the nucleic acid) in the
genomic DNA of the organism from which the nucleic acid is derived.
However, there can be some flanking nucleotide sequences, for
example up to about 5 KB, 4 KB, 3 KB, 2 KB, or 1 KB or less,
particularly contiguous peptide encoding sequences and peptide
encoding sequences within the same gene but separated by introns in
the genomic sequence. The important point is that the nucleic acid
is isolated from remote and unimportant flanking sequences such
that it can be subjected to the specific manipulations described
herein such as recombinant expression, preparation of probes and
primers, and other uses specific to the nucleic acid sequences.
[0152] Moreover, an "isolated" nucleic acid molecule, such as a
transcript/cDNA molecule, can be substantially free of other
cellular material, or culture medium when produced by recombinant
techniques, or chemical precursors or other chemicals when
chemically synthesized. However, the nucleic acid molecule can be
fused to other coding or regulatory sequences and still be
considered isolated.
[0153] For example, recombinant DNA molecules contained in a vector
are considered isolated. Further examples of isolated DNA molecules
include recombinant DNA molecules maintained in heterologous host
cells or purified (partially or substantially) DNA molecules in
solution. Isolated RNA molecules include in vivo or in vitro RNA
transcripts of the isolated DNA molecules of the present invention.
Isolated nucleic acid molecules according to the present invention
further include such molecules produced synthetically.
[0154] Accordingly, the present invention provides nucleic acid
molecules that consist of the nucleotide sequence shown in FIGS. 1
or 3 (SEQ ID NO:1 and SEQ ID NO:2, transcript sequences and SEQ ID
NO:5, genomic sequence), or any nucleic acid molecule that encodes
the proteins provided in FIG. 2, SEQ ID NO:3 and SEQ ID NO:4. A
nucleic acid molecule consists of a nucleotide sequence when the
nucleotide sequence is the complete nucleotide sequence of the
nucleic acid molecule.
[0155] The present invention further provides nucleic acid
molecules that consist essentially of the nucleotide sequence shown
in FIGS. 1 or 3 (SEQ ID NO:1 and SEQ ID NO:2, transcript sequences
and SEQ ID NO:5, genomic sequence), or any nucleic acid molecule
that encodes the proteins provided in FIG. 2, SEQ ID NO:3 and SEQ
ID NO:4. A nucleic acid molecule consists essentially of a
nucleotide sequence when such a nucleotide sequence is present with
only a few additional nucleic acid residues in the final nucleic
acid molecule.
[0156] The present invention further provides nucleic acid
molecules that comprise the nucleotide sequences shown in FIGS. 1
or 3 (SEQ ID NO:1 and SEQ ID NO:2, transcript sequences and SEQ ID
NO:5, genomic sequence), or any nucleic acid molecule that encodes
the proteins provided in FIG. 2, SEQ ID NO:3 and SEQ ID NO:4. A
nucleic acid molecule comprises a nucleotide sequence when the
nucleotide sequence is at least part of the final nucleotide
sequence of the nucleic acid molecule. In such a fashion, the
nucleic acid molecule can be only the nucleotide sequence or have
additional nucleic acid residues, such as nucleic acid residues
that are naturally associated with it or heterologous nucleotide
sequences. Such a nucleic acid molecule can have a few additional
nucleotides or can comprise several hundred or more additional
nucleotides. A brief description of how various types of these
nucleic acid molecules can be readily made/isolated is provided
below.
[0157] In FIGS. 1 and 3, both coding and non-coding sequences are
provided. Because of the source of the present invention, humans
genomic sequence (FIG. 3) and cDNA/transcript sequences (FIG. 1),
the nucleic acid molecules in the Figures will contain genomic
intronic sequences, 5' and 3' non-coding sequences, gene regulatory
regions and non-coding intergenic sequences. In general such
sequence features are either noted in FIGS. 1 and 3 or can readily
be identified using computational tools known in the art. As
discussed below, some of the non-coding regions, particularly gene
regulatory elements such as promoters, are useful for a variety of
purposes, e.g. control of heterologous gene expression, target for
identifying gene activity modulating compounds, and are
particularly claimed as fragments of the genomic sequence provided
herein.
[0158] The isolated nucleic acid molecules can encode the mature
protein plus additional amino or carboxyl-terminal amino acids, or
amino acids interior to the mature peptide (when the mature form
has more than one peptide chain, for instance). Such sequences may
play a role in processing of a protein from precursor to a mature
form, facilitate protein trafficking, prolong or shorten protein
half-life or facilitate manipulation of a protein for assay or
production, among other things. As generally is the case in situ,
the additional amino acids may be processed away from the mature
protein by cellular enzymes.
[0159] As mentioned above, the isolated nucleic acid molecules
include, but are not limited to, the sequence encoding the
transporter peptide alone, the sequence encoding the mature peptide
and additional coding sequences, such as a leader or secretory
sequence (e.g., a pre-pro or pro-protein sequence), the sequence
encoding the mature peptide, with or without the additional coding
sequences, plus additional non-coding sequences, for example
introns and non-coding 5' and 3' sequences such as transcribed but
non-translated sequences that play a role in transcription, mRNA
processing (including splicing and polyadenylation signals),
ribosome binding and stability of mRNA. In addition, the nucleic
acid molecule may be fused to a marker sequence encoding, for
example, a peptide that facilitates purification.
[0160] Isolated nucleic acid molecules can be in the form of RNA,
such as mRNA, or in the form DNA, including cDNA and genomic DNA
obtained by cloning or produced by chemical synthetic techniques or
by a combination thereof. The nucleic acid, especially DNA, can be
double-stranded or single-stranded. Single-stranded nucleic acid
can be the coding strand (sense strand) or the non-coding strand
(anti-sense strand).
[0161] The invention further provides nucleic acid molecules that
encode fragments of the peptides of the present invention as well
as nucleic acid molecules that encode obvious variants of the
transporter proteins of the present invention that are described
above. Such nucleic acid molecules may be naturally occurring, such
as allelic variants (same locus), paralogs (different locus), and
orthologs (different organism), or may be constructed by
recombinant DNA methods or by chemical synthesis. Such
non-naturally occurring variants may be made by mutagenesis
techniques, including those applied to nucleic acid molecules,
cells, or organisms. Accordingly, as discussed above, the variants
can contain nucleotide substitutions, deletions, inversions and
insertions. Variation can occur in either or both the coding and
non-coding regions. The variations can produce both conservative
and non-conservative amino acid substitutions.
[0162] The present invention further provides non-coding fragments
of the nucleic acid molecules provided in FIGS. 1 and 3. Preferred
non-coding fragments include, but are not limited to, promoter
sequences, enhancer sequences, gene modulating sequences and gene
termination sequences. Such fragments are useful in controlling
heterologous gene expression and in developing screens to identify
gene-modulating agents. A promoter can readily be identified as
being 5' to the ATG start site in the genomic sequence provided in
FIG. 3.
[0163] A fragment comprises a contiguous nucleotide sequence
greater than 12 or more nucleotides. Further, a fragment could at
least 30, 40, 50, 100, 250 or 500 nucleotides in length. The length
of the fragment will be based on its intended use. For example, the
fragment can encode epitope bearing regions of the peptide, or can
be useful as DNA probes and primers. Such fragments can be isolated
using the known nucleotide sequence to synthesize an
oligonucleotide probe. A labeled probe can then be used to screen a
cDNA library, genomic DNA library, or mRNA to isolate nucleic acid
corresponding to the coding region. Further, primers can be used in
PCR reactions to clone specific regions of gene.
[0164] A probe/primer typically comprises substantially a purified
oligonucleotide or oligonucleotide. pair. The oligonucleotide
typically comprises a region of nucleotide sequence that hybridizes
under stringent conditions to at least about 12, 20, 25, 40, 50 or
more consecutive nucleotides.
[0165] Orthologs, homologs, and allelic variants can be identified
using methods well known in the art. As described in the Peptide
Section, these variants comprise a nucleotide sequence encoding a
peptide that is typically 60-70%, 70-80%, 80-90%, and more
typically at least about 90-95% or more homologous to the
nucleotide sequence shown in the Figure sheets or a fragment of
this sequence. Such nucleic acid molecules can readily be
identified as being able to hybridize under moderate to stringent
conditions, to the nucleotide sequence shown in the Figure sheets
or a fragment of the sequence. Allelic variants can readily be
determined by genetic locus of the encoding gene. As indicated by
the data presented in FIG. 3, the map position was determined to be
on chromosome 1.
[0166] FIG. 3 provides information on SNPs that have been found in
the gene encoding the transporter protein of the present invention.
SNPs were identified at 42 different nucleotide positions in
introns and regions 5' and 3' of the ORF. Such SNPs in introns and
outside the ORF may affect control/regulatory elements. Two SNPs in
exons, of which 1 of these cause changes in the amino acid sequence
(i.e., nonsynonymous SNPs). The changes in the amino acid sequence
that these SNPs cause is indicated in FIG. 3 and can readily be
determined using the universal genetic code and the protein
sequence provided in FIG. 2 as a reference.
[0167] As used herein, the term "hybridizes under stringent
conditions" is intended to describe conditions for hybridization
and washing under which nucleotide sequences encoding a peptide at
least 60-70% homologous to each other typically remain hybridized
to each other. The conditions can be such that sequences at least
about 60%, at least about 70%, or at least about 80% or more
homologous to each other typically remain hybridized to each other.
Such stringent conditions are known to those skilled in the art and
can be found in Current Protocols in Molecular Biology, John Wiley
& Sons, N.Y. (1989), 6.3.1-6.3.6. One example of stringent
hybridization conditions are hybridization in 6.times.sodium
chloride/sodium citrate (SSC) at about 45 C., followed by one or
more washes in 0.2.times.SSC, 0.1% SDS at 50-65C. Examples of
moderate to low stringency hybridization conditions are well known
in the art.
[0168] Nucleic Acid Molecule Uses
[0169] The nucleic acid molecules of the present invention are
useful for probes, primers, chemical intermediates, and in
biological assays. The nucleic acid molecules are useful as a
hybridization probe for messenger RNA, transcript/cDNA and genomic
DNA to isolate full-length cDNA and genomic clones encoding the
peptide described in FIG. 2 and to isolate cDNA. and genomic clones
that correspond to variants (alleles, orthologs, etc.) producing
the same or related peptides shown in Figure, 2. As illustrated in
FIG. 3, SNPs, including insertion/deletion variants ("indels"),
were identified at 42 different nucleotide positions.
[0170] The probe can correspond to any sequence along the entire
length of the nucleic acid molecules provided in the Figures.
Accordingly, it could be derived from 5' noncoding regions, the
coding region, and 3' noncoding regions. However, as discussed,
fragments are not to be construed as encompassing fragments
disclosed prior to the present invention.
[0171] The nucleic acid molecules are also useful as primers for
PCR to amplify any given region of a nucleic acid molecule and are
useful to synthesize antisense molecules of desired length and
sequence.
[0172] The nucleic acid molecules are also useful for constructing
recombinant vectors. Such vectors include expression vectors that
express a portion of, or all of, the peptide sequences. Vectors
also include insertion vectors, used to integrate into another
nucleic acid molecule sequence, such as into the cellular genome,
to alter in situ expression of a gene and/or gene product. For
example, an endogenous coding sequence can be replaced via
homologous recombination with all or part of the coding region
containing one or more specifically introduced mutations.
[0173] The nucleic acid molecules are also useful for expressing
antigenic portions of the proteins.
[0174] The nucleic acid molecules are also useful as probes for
determining the chromosomal positions of the nucleic acid molecules
by means of in situ hybridization methods. As indicated by the data
presented in FIG. 3, the map position was determined to be on
chromosome 1.
[0175] The nucleic acid molecules are also useful in making vectors
containing the gene regulatory regions of the nucleic acid
molecules of the present invention.
[0176] The nucleic acid molecules are also useful for designing
ribozymes corresponding to all, or a part, of the mRNA produced
from the nucleic acid molecules described herein.
[0177] The nucleic acid molecules are also useful for making
vectors that express part, or all, of the peptides.
[0178] The nucleic acid molecules are also useful for constructing
host cells expressing a part, or all, of the nucleic acid molecules
and peptides.
[0179] The nucleic acid molecules are also useful for constructing
transgenic animals expressing all, or a part, of the nucleic acid
molecules and peptides.
[0180] The nucleic acid molecules are also useful as hybridization
probes for determining the presence, level, form and distribution
of nucleic acid expression. Experimental data as provided in FIG. 1
indicates that the transporter protein of the present invention is
expressed in the ovary (adenocarcinoma tissue), uterus
(leiomyosarcoma tissue), cervix, kidney cancer tissue
(hypemephroma), germinal center B cell, colon, and infant brain by
a virtual northern blot.
[0181] Accordingly, the probes can be used to detect the presence
of, or to determine levels of, a specific nucleic acid molecule in
cells, tissues, and in organisms. The nucleic acid whose level is
determined can be DNA or RNA. Accordingly, probes corresponding to
the peptides described herein can be used to assess expression
andlor gene copy number in a given cell, tissue, or organism. These
uses are relevant for diagnosis of disorders involving an increase
or decrease in transporter protein expression relative to normal
results.
[0182] In vitro techniques for detection of mRNA include Northern
hybridizations and in situ hybridizations. In vitro techniques for
detecting DNA include Southern hybridizations and in situ
hybridization.
[0183] Probes can be used as a part of a diagnostic test kit for
identifying cells or tissues that express a transporter protein,
such as by measuring a level of a transporter-encoding nucleic acid
in a sample of cells from a subject e.g., mRNA or genomic DNA, or
determining if a transporter gene has been mutated. Experimental
data as provided in FIG. 1 indicates that the transporter protein
of the present invention is expressed in the ovary (adenocarcinoma
tissue), uterus (leiomyosarcoma tissue), cervix, kidney cancer
tissue (hypemephroma), germinal center B cell, colon, and infant
brain by a virtual northern blot. In addition, PCR-based tissue
screening panels indicate expression in kidney.
[0184] Nucleic acid expression assays are useful for drug screening
to identify compounds that modulate transporter nucleic acid
expression.
[0185] The invention thus provides a method for identifying a
compound that can be used to treat a disorder associated with
nucleic acid expression of the transporter gene, particularly
biological and pathological processes that are mediated by the
transporter in cells and tissues that express it. Experimental data
as provided in FIG. 1 indicates expression in ovary (adenocarcinoma
tissue), uterus (leiomyosarcoma tissue), cervix, kidney, kidney
cancer tissue (hypemephroma), germinal center B cell, colon, and
infant brain. The method typically includes assaying the ability of
the compound to modulate the expression of the transporter nucleic
acid and thus identifying a compound that can be used to treat a
disorder characterized by undesired transporter nucleic acid
expression. The assays can be performed in cell-based and cell-free
systems. Cell-based assays include cells naturally expressing the
transporter nucleic acid or recombinant cells genetically
engineered to express specific nucleic acid sequences.
[0186] The assay for transporter nucleic acid expression can
involve direct assay of nucleic acid levels, such as mRNA levels,
or on collateral compounds involved in the signal pathway. Further,
the expression of genes that are up- or down-regulated in response
to the transporter protein signal pathway can also be assayed. In
this embodiment the regulatory regions of these genes can be
operably linked to a reporter gene such as luciferase.
[0187] Thus, modulators of transporter gene expression can be
identified in a method wherein a cell is contacted with a candidate
compound and the expression of mRNA determined. The level of
expression of transporter mRNA in the presence of the candidate
compound is compared to the level of expression of transporter mRNA
in the absence of the candidate compound. The candidate compound
can then be identified as a modulator of nucleic acid expression
based on this comparison and be used, for example to treat a
disorder characterized by aberrant nucleic acid expression. When
expression of mRNA is statistically significantly greater in the
presence of the candidate compound than in its absence, the
candidate compound is identified as a stimulator of nucleic acid
expression. When nucleic acid expression is statistically
significantly less in the presence of the candidate compound than
in its absence, the candidate compound is identified as an
inhibitor of nucleic acid expression.
[0188] The invention further provides methods of treatment, with
the nucleic acid as a target, using a compound identified through
drug screening as a gene modulator to modulate transporter nucleic
acid expression in cells and tissues that express the transporter.
Experimental data as provided in FIG. 1 indicates that the
transporter protein of the present invention is expressed in the
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney cancer tissue (hypemephroma), germinal center B
cell, colon, and infant brain by a virtual northern blot. In
addition, PCR-based tissue screening panels indicate expression in
kidney. Modulation includes both up-regulation (i.e. activation or
agonization) or down-regulation (suppression or antagonization) or
nucleic acid expression.
[0189] Alternatively, a modulator for transporter nucleic acid
expression can be a small molecule or drug identified using the
screening assays described herein as long as the drug or small
molecule inhibits the transporter nucleic acid expression in the
cells and tissues that express the protein. Experimental data as
provided in FIG. 1 indicates expression in ovary (adenocarcinoma
tissue), uterus (leiomyosarcoma tissue), cervix, kidney, kidney
cancer tissue (hypernephroma), germinal center B cell, colon, and
infant brain.
[0190] The nucleic acid molecules are also useful for monitoring
the effectiveness of modulating compounds on the expression or
activity of the transporter gene in clinical trials or in a
treatment regimen. Thus, the gene expression pattern can serve as a
barometer for the continuing effectiveness of treatment with the
compound, particularly with compounds to which a patient can
develop resistance. The gene expression pattern can also serve as a
marker indicative of a physiological response of the affected cells
to the compound. Accordingly, such monitoring would allow either
increased administration of the compound or the administration of
alternative compounds to which the patient has not become
resistant. Similarly, if the level of nucleic acid expression falls
below a desirable level, administration of the compound could be
commensurately decreased.
[0191] The nucleic acid molecules are also useful in diagnostic
assays for qualitative changes in transporter nucleic acid
expression, and particularly in qualitative changes that lead to
pathology. The nucleic acid molecules can be used to detect
mutations in transporter genes and gene expression products such as
mRNA. The nucleic acid molecules can be used as hybridization
probes to detect naturally occurring genetic mutations in the
transporter gene and thereby to determine whether a subject with
the mutation is at risk for a disorder caused by the mutation.
Mutations include deletion, addition, or substitution of one or
more nucleotides in the gene, chromosomal rearrangement, such as
inversion or transposition, modification of genomic DNA, such as
aberrant methylation patterns or changes in gene copy number, such
as amplification. Detection of a mutated form of the transporter
gene associated with a dysfunction provides a diagnostic tool for
an active disease or susceptibility to disease when the disease
results from overexpression, underexpression, or altered expression
of a transporter protein.
[0192] Individuals carrying mutations in the transporter gene can
be detected at the nucleic acid level by a variety of techniques.
FIG. 3 provides information on SNPs that have been found in the
gene encoding the transporter protein of the present invention.
SNPs were identified at 42 different nucleotide positions in
introns and regions 5' and 3' of the ORF. Such SNPs in introns and
outside the ORF may affect control/regulatory elements. Two SNPs in
exons, of which 1 of these cause changes in the amino acid sequence
(i.e., nonsynonymous SNPs). The changes in the amino acid sequence
that these SNPs cause is indicated in FIG. 3 and can readily be
determined using the universal genetic code and the protein
sequence provided in FIG. 2 as a reference. As indicated by the
data presented in FIG. 3, the map position was determined to be on
chromosome 1. Genomic DNA can be analyzed directly or can be
amplified by using PCR prior to analysis. RNA or cDNA can be used
in the same way. In some uses, detection of the mutation involves
the use of a probe/primer in a polymerase chain reaction (PCR)
(see, e.g. U.S. Pat. Nos.4,683,195 and 4,683,202), such as anchor
PCR or RACE PCR, or, alternatively, in a ligation chain reaction
(LCR) (see, e.g., Landegran et al., Science 241:1077-1080 (1988);
and Nakazawa et al., PNAS 91:360-364 (1994)), the latter of which
can be particularly useful for detecting point mutations in the
gene (see Abravaya et al., Nucleic Acids Res. 23:675-682 (1995)).
This method can include the steps of collecting a sample of cells
from a patient, isolating nucleic acid (e.g., genomic, mRNA or
both) from the cells of the sample, contacting the nucleic acid
sample with one or more primers which specifically hybridize to a
gene under conditions such that hybridization and amplification of
the gene (if present) occurs, and detecting the presence or absence
of an amplification product, or detecting the size of the
amplification product and comparing the length to a control sample.
Deletions and insertions can be detected by a change in size of the
amplified product compared to the normal genotype. Point mutations
can be identified by hybridizing amplified DNA to normal RNA or
antisense DNA sequences.
[0193] Alternatively, mutations in a transporter gene can be
directly identified, for example, by alterations in restriction
enzyme digestion patterns determined by gel electrophoresis.
[0194] Further, sequence-specific ribozymes (U.S. Pat. No.
5,498,531) can be used to score for the presence of specific
mutations by development or loss of a ribozyme cleavage site.
Perfectly matched sequences can be distinguished from mismatched
sequences by nuclease cleavage digestion assays or by differences
in melting temperature.
[0195] Sequence changes at specific locations can also be assessed
by nuclease protection assays such as RNase and S1 protection or
the chemical cleavage method. Furthermore, sequence differences
between a mutant transporter gene and a wild-type gene can be
determined by direct DNA sequencing. A variety of automated
sequencing procedures can be utilized when performing the
diagnostic assays (Naeve, C. W., (1995) Biotechniques 19:448),
including sequencing by mass spectrometry (see, e.g., PCT
International Publication No. WO 94/16101; Cohen et al., Adv.
Chromatogr. 36:127-162 (1996); and Griffin et al., Appl. Biochem.
Biotechnol. 38:147-159 (1993)).
[0196] Other methods for detecting mutations in the gene include
methods in which protection from cleavage agents is used to detect
mismatched bases in RNA/RNA or RNA/DNA duplexes (Myers et al.,
Science 230:1242 (1985)); Cotton et al., PNAS 85:4397 (1988);
Saleeba et al., Meth. Enzymol. 217:286-295 ;(1992)),
electrophoretic mobility of mutant and wild type nucleic acid is
compared (Orita et al., PNAS 86:2766 (1989); Cotton et al., Mutat.
Res. 285:125-144 (1993); and Hayashi et al., Genet. Anal. Tech.
Appl, 9:73-79 (1992)), and movement of mutant or wild-type
fragments in polyacrylamide gels containing a gradient of
denaturant is assayed using denaturing gradient gel
electrophoresis(Myers et al., Nature 313:495 (1985)). Examples of
other techniques for detecting point mutations include selective
oligonucleotide hybridization, selective amplification, and
selective primer extension.
[0197] The nucleic acid molecules are also useful for testing an
individual for a genotype that while not necessarily causing the
disease, nevertheless affects the treatment modality. Thus, the
nucleic acid molecules can be used to study the relationship
between an individual's genotype and the individual's response to a
compound used for treatment (pharmacogenomic relationship).
Accordingly, the nucleic acid molecules described herein can be
used to assess the mutation content of the transporter gene in an
individual in order to select an appropriate compound or dosage
regimen for treatment. FIG. 3 provides information on SNPs that
have been found in the gene encoding the transporter protein of the
present invention. SNPs were identified at 42 different nucleotide
positions in introns and regions 5' and 3' of the ORF. Such SNPs in
introns and outside the ORF may affect control/regulatory elements.
Two SNPs in exons, of which 1 of these cause changes in the amino
acid sequence (i.e., nonsynonymous SNPs). The changes in the amino
acid sequence that these SNPs cause is indicated in FIG. 3 and can
readily be determined using the universal genetic code and the
protein sequence provided in FIG. 2 as a reference.
[0198] Thus nucleic acid molecules displaying genetic variations
that affect treatment provide a diagnostic target that can be used
to tailor treatment in an individual. Accordingly, the production
of recombinant cells and animals containing these polymorphisms
allow effective clinical design of treatment compounds and dosage
regimens.
[0199] The nucleic acid molecules are thus useful as antisense
constructs to control transporter gene expression in cells,
tissues, and organisms. A DNA antisense nucleic acid molecule is
designed to be complementary to a region of the gene involved in
transcription, preventing transcription and hence production of
transporter protein. An antisense RNA or DNA nucleic acid molecule
would hybridize to the mRNA and thus block translation of mRNA into
transporter protein.
[0200] Alternatively, a class of antisense molecules can be used to
inactivate mRNA in order to decrease expression of transporter
nucleic acid. Accordingly, these molecules can treat a disorder
characterized by abnormal or undesired transporter nucleic acid
expression. This technique involves cleavage by means of ribozymes
containing nucleotide sequences complementary to one or more
regions in the mRNA that attenuate the ability of the mRNA to be
translated. Possible regions include coding regions and
particularly coding regions corresponding to the catalytic and
other functional activities of the transporter protein, such as
ligand binding.
[0201] The nucleic acid molecules also provide vectors for gene
therapy in patients containing cells that are aberrant in
transporter gene expression. Thus, recombinant cells, which include
the patient's cells that have been engineered ex vivo and returned
to the patient, are introduced into an individual where the cells
produce the desired transporter protein to treat the
individual.
[0202] The invention also encompasses kits for detecting the
presence of a transporter nucleic acid in a biological sample.
Experimental data as provided in FIG. 1 indicates that the
transporter protein of the present invention is expressed in the
ovary (adenocarcinoma tissue), uterus (leiomyosarcoma tissue),
cervix, kidney cancer tissue (hypernephroma), germinal center B
cell, colon, and infant brain by a virtual northern blot. In
addition, PCR-based tissue screening panels indicate expression in
kidney. For example, the kit can comprise reagents such as a
labeled or labelable nucleic acid or agent capable of detecting
transporter nucleic acid in a biological sample; means for
determining the amount of transporter nucleic acid in the sample;
and means for comparing the amount of transporter nucleic acid in
the sample with a standard. The compound or agent can be packaged
in a suitable container. The kit can further comprise instructions
for using the kit to detect transporter protein mRNA or DNA.
[0203] Nucleic Acid Arrays
[0204] The present invention further provides nucleic acid
detection kits, such as arrays or microarrays of nucleic acid
molecules that are based on the sequence information provided in
FIGS. 1 and 3 (SEQ ID NOS:1, 2, and 5).
[0205] As used herein "Arrays" or "Microarrays" refers to an array
of distinct polynucleotides or oligonucleotides synthesized on a
substrate, such as paper, nylon or other type of membrane, filter,
chip, glass slide, or any other suitable solid support. In one
embodiment, the microarray is prepared and used according to the
methods described in U.S. Pat. No. 5,837,832, Chee et al., PCT
application WO95/11995 (Chee et al.), Lockhart, D. J. et al. (1996;
Nat. Biotech. 14: 1675-1680) and Schena, M. et al. (1996; Proc.
Natl. Acad. Sci. 93: 10614-10619), all of which are incorporated
herein in their entirety by reference. In other embodiments, such
arrays are produced by the methods described by Brown et al., U.S.
Pat. No. 5,807,522.
[0206] The microarray or detection kit is preferably composed of a
large number of unique, single-stranded nucleic acid sequences,
usually either synthetic antisense oligonucleotides or fragments of
cDNAs, fixed to a solid support. The oligonucleotides are
preferably about 6-60 nucleotides in length, more preferably 15-30
nucleotides in length, and most preferably about 20-25 nucleotides
in length. For a certain type of microarray or detection kit, it
may be preferable to use oligonucleotides that are only 7-20
nucleotides in length. The microarray or detection kit may contain
oligonucleotides that cover the known 5', or 3', sequence,
sequential oligonucleotides that cover the full length sequence; or
unique oligonucleotides selected from particular areas along the
length of the sequence. Polynucleotides used in the microarray or
detection kit may be oligonucleotides that are specific to a gene
or genes of interest.
[0207] In order to produce oligonucleotides to a known sequence for
a microarray or detection kit, the gene(s) of interest (or an ORF
identified from the contigs of the present invention) is typically
examined using a computer algorithm which starts at the 5' or at
the 3' end of the nucleotide sequence. Typical algorithms will then
identify oligomers of defined length that are unique to the gene,
have a GC content within a range suitable for hybridization, and
lack predicted secondary structure that may interfere with
hybridization. In certain situations it may be appropriate to use
pairs of oligonucleotides on a microarray or detection kit. The
"pairs" will be identical, except for one nucleotide that
preferably is located in the center of the sequence. The second
oligonucleotide in the pair (mismatched by one) serves as a
control. The number of oligonucleotide pairs may range from two to
one million. The oligomers are synthesized at designated areas on a
substrate using a light-directed chemical process. The substrate
may be paper, nylon or other type of membrane, filter, chip, glass
slide or any other suitable solid support.
[0208] In another aspect, an oligonucleotide may be synthesized on
the surface of the substrate by using a chemical coupling procedure
and an ink jet application apparatus, as described in PCT
application WO95/251116 (Baldeschweiler et al.) which is
incorporated herein in its entirety by reference. In another
aspect, a "gridded" array analogous to a dot (or slot) blot may be
used to arrange and link cDNA fragments or oligonucleotides to the
surface of a substrate using a vacuum system, thermal, UV,
mechanical or chemical bonding procedures. An array, such as those
described above, may be produced by hand or by using available
devices (slot blot or dot-blot apparatus), materials (any suitable
solid support), and machines (including robotic instruments), and
may contain 8, 24, 96, 384, 1536, 6144 or more oligonucleotides, or
any other number between two and one million which lends itself to
the efficient use of commercially available instrumentation.
[0209] In order to conduct sample analysis using a microarray or
detection kit, the RNA or DNA from a biological sample is made into
hybridization probes. The mRNA is isolated, and cDNA is produced
and used as a template to make antisense RNA (aRNA). The aRNA is
amplified in the presence of fluorescent nucleotides, and labeled
probes are incubated with the microarray or detection kit so that
the probe sequences hybridize to complementary oligonucleotides of
the microarray or detection kit. Incubation conditions are adjusted
so that hybridization occurs with precise complementary matches or
with various degrees of less complementarity. After removal of
nonhybridized probes, a scanner is used to determine the levels and
patterns of fluorescence. The scanned images are examined to
determine degree of complementarity and the relative abundance of
each oligonucleotide sequence on the microarray or detection kit.
The biological samples may be obtained from any bodily fluids (such
as blood, urine, saliva, phlegm, gastric juices, etc.), cultured
cells, biopsies, or other tissue preparations. A detection system
may be used to measure the absence, presence, and amount of
hybridization for all of the distinct sequences simultaneously.
This data may be used for large-scale correlation studies on the
sequences, expression patterns, mutations, variants, or
polymorphisms among samples.
[0210] Using such arrays, the present invention provides methods to
identify the expression of the transporter proteins/peptides of the
present invention. In detail, such methods comprise incubating a
test sample with one or more nucleic acid molecules and assaying
for binding of the nucleic acid molecule with components within the
test sample. Such assays will typically involve arrays comprising
many genes, at least one of which is a gene of the present
invention and or alleles of the transporter gene of the present
invention. FIG. 3 provides information on SNPs that have been found
in the gene encoding the transporter protein of the present
invention. SNPs were identified at 42 different nucleotide
positions in introns and regions 5' and 3' of the ORF. Such SNPs in
introns and outside the ORF may affect control/regulatory elements.
Two SNPs in exons, of which 1 of these cause changes in the amino
acid sequence (i.e., nonsynonymous SNPs). The changes in the amino
acid sequence that these SNPs cause is indicated in FIG. 3 and can
readily be determined using the universal genetic code and the
protein sequence provided in FIG. 2 as a reference.
[0211] Conditions for incubating a nucleic acid molecule with a
test sample vary. Incubation conditions depend on the format
employed in the assay, the detection methods employed, and the type
and nature of the nucleic acid molecule used in the assay. One
skilled in the art will recognize that any one of the commonly
available hybridization amplification or array assay formats can
readily be adapted to employ the novel fragments of the Human
genome disclosed herein. Examples of such assays can be found in
Chard, T, An Introduction to Radioimmunoassay and Related
Techniques, Elsevier Science Publishers, Amsterdam, The Netherlands
(1986); Bullock, G. R. et al., Techniques in Immunocytochemistry,
Academic Press, Orlando, Fla. Vol. 1 (1 982), Vol. 2 (1983), Vol. 3
(1985); Tijssen, P., Practice and Theory of Enzyme Immunoassays:
Laboratory Techniques in Biochemistry and Molecular Biology,
Elsevier Science Publishers, Amsterdam, The Netherlands (1985).
[0212] The test samples of the present invention include cells,
protein or membrane extracts of cells. The test sample used in the
above-described method will vary based on the assay format, nature
of the detection method and the tissues, cells or extracts used as
the sample to be assayed. Methods for preparing nucleic acid
extracts or of cells are well known in the art and can be readily
be adapted in order to obtain a sample that is compatible with the
system utilized.
[0213] In another embodiment of the present invention, kits are
provided which contain the necessary reagents to carry out the
assays of the present invention.
[0214] Specifically, the invention provides a compartmentalized kit
to receive, in close confinement, one or more containers which
comprises: (a) a first container comprising one of the nucleic acid
molecules that can bind to a fragment of the Human genome disclosed
herein; and (b) one or more other containers comprising one or more
of the following: wash reagents, reagents capable of detecting
presence of a bound nucleic acid.
[0215] In detail, a compartmentalized kit includes any kit in which
reagents are contained in separate containers. Such containers
include small glass containers, plastic containers, strips of
plastic, glass or paper, or arraying material such as silica. Such
containers allows one to efficiently transfer reagents from one
compartment to another compartment such that the samples and
reagents are not cross-contaminated, and the agents or solutions of
each container can be added in a quantitative fashion from one
compartment to another. Such containers will include a container
which will accept the test sample, a container which contains the
nucleic acid probe, containers which contain wash reagents (such as
phosphate buffered saline, Tris-buffers, etc.), and containers
which contain the reagents used to detect the bound probe. One
skilled in the art will readily recognize that the previously
unidentified transporter gene of the present invention can be
routinely identified using the sequence information disclosed
herein can be readily incorporated into one of the established kit
formats which are well known in the art, particularly expression
arrays.
[0216] Vectors/Host Cells
[0217] The invention also provides vectors containing the nucleic
acid molecules described herein. The term "vector" refers to a
vehicle, preferably a nucleic acid molecule, which can transport
the nucleic acid molecules. When the vector is a nucleic acid
molecule, the nucleic acid molecules are covalently linked to the
vector nucleic acid. With this aspect of the invention, the vector
includes a plasmid, single or double stranded phage, a single or
double stranded RNA or DNA viral vector, or artificial chromosome,
such as a BAC, PAC, YAC, OR MAC.
[0218] A vector can be maintained in the host cell as an
extrachromosomal element where it replicates and produces
additional copies of the nucleic acid molecules. Alternatively, the
vector may integrate into the host cell genome and produce
additional copies of the nucleic acid molecules when the host cell
replicates.
[0219] The invention provides vectors for the maintenance (cloning
vectors) or vectors for expression (expression vectors) of the
nucleic acid molecules. The vectors can function in procaryotic or
eukaryotic cells or in both (shuttle vectors).
[0220] Expression vectors contain cis-acting regulatory regions
that are operably linked in the vector to the nucleic acid
molecules such that transcription of the nucleic acid molecules is
allowed in a host cell. The nucleic acid molecules can be
introduced into the host cell with a separate nucleic acid molecule
capable of affecting transcription. Thus, the second nucleic acid
molecule may provide a trans-acting factor interacting with the
cis-regulatory control region to allow transcription of the nucleic
acid molecules from the vector. Alternatively, a trans-acting
factor may be supplied by the host cell. Finally, a trans-acting
factor can be produced from the vector itself. It is understood,
however, that in some embodiments, transcription and/or translation
of the nucleic acid molecules can occur in a cell-free system.
[0221] The regulatory sequence to which the nucleic acid molecules
described herein can be operably linked include promoters for
directing mRNA transcription. These include, but are not limited
to, the left promoter from bacteriophage .lambda., the lac, TRP,
and TAC promoters from E. coli, the early and late promoters from
SV40, the CMV immediate early promoter, the adenovirus early and
late promoters, and retrovirus long-terminal repeats.
[0222] In addition to control regions that promote transcription,
expression vectors may also include regions that modulate
transcription, such as repressor binding sites and enhancers.
Examples include the SV40 enhancer, the cytomegalovirus immediate
early enhancer, polyoma enhancer, adenovirus enhancers, and
retrovirus LTR enhancers.
[0223] In addition to containing sites for transcription initiation
and control, expression vectors can also contain sequences
necessary for transcription termination and, in the transcribed
region a ribosome binding site for translation. Other regulatory
control elements for expression include initiation and termination
codons as well as polyadenylation signals. The person of ordinary
skill in the art would be aware of the numerous regulatory
sequences that are useful in expression vectors. Such regulatory
sequences are described, for example, in Sambrook et al., Molecular
Cloning: A Laboratory Manual. 2nd. ed., Cold Spring Harbor
Laboratory Press, Cold Spring Harbor, N.Y., (1989).
[0224] A variety of expression vectors can be used to express a
nucleic acid molecule. Such vectors include chromosomal, episomal,
and virus-derived vectors, for example vectors derived from
bacterial plasmids, from bacteriophage, from yeast episomes, from
yeast chromosomal elements, including yeast artificial chromosomes,
from viruses such as baculoviruses, papovaviruses such as SV40,
Vaccinia viruses, adenoviruses, poxviruses, pseudorabies viruses,
and retroviruses. Vectors may also be derived from combinations of
these sources such as those derived from plasmid and bacteriophage
genetic elements, e.g. cosmids and phagemids. Appropriate cloning
and expression vectors for prokaryotic and eukaryotic hosts are
described in Sambrook et al., Molecular Cloning: A Laboratory
Manual. 2nd. ed., Cold Spring Harbor Laboratory Press, Cold Spring
Harbor, N.Y., (1989).
[0225] The regulatory sequence may provide constitutive expression
in one or more host cells (i.e. tissue specific) or may provide for
inducible expression in one or more cell types such as by
temperature, nutrient additive, or exogenous factor such as a
hormone or other ligand. A variety of vectors providing for
constitutive and inducible expression in prokaryotic and eukaryotic
hosts are well known to those of ordinary skill in the art.
[0226] The nucleic acid molecules can be inserted into the vector
nucleic acid by well-known methodology. Generally, the DNA sequence
that will ultimately be expressed is joined to an expression vector
by cleaving the DNA sequence and the expression vector with one or
more restriction enzymes and then ligating the fragments together.
Procedures for restriction enzyme digestion and ligation are well
known to those of ordinary skill in the art.
[0227] The vector containing the appropriate nucleic acid molecule
can be introduced into an appropriate host cell for propagation or
expression using well-known techniques. Bacterial cells include,
but are not limited to, E. coli, Streptomyces, and Salmonella
typhimurium. Eukaryotic cells include, but are not limited to,
yeast, insect cells such as Drosophila, animal cells such as COS
and CHO cells, and plant cells.
[0228] As described herein, it may be desirable to express the
peptide as a fusion protein. Accordingly, the invention provides
fusion vectors that allow for the production of the peptides.
Fusion vectors can. increase the expression of a recombinant
protein, increase the solubility of the recombinant protein, and
aid in the purification of the protein by acting for example as a
ligand for affinity purification. A proteolytic cleavage site may
be introduced at the junction of the fusion moiety so that the
desired peptide can ultimately be separated from the fusion moiety.
Proteolytic enzymes include, but are not limited to, factor Xa,
thrombin, and enterotransporter. Typical fusion expression vectors
include pGEX (Smith et al., Gene 67:3140 (1988)), pMAL (New England
Biolabs, Beverly, Mass.) and pRIT5 (Pharmacia, Piscataway, N.J.)
which fuse glutathione S-transferase (GST), maltose E binding
protein, or protein A, respectively, to the target recombinant
protein. Examples of suitable inducible non-fusion E. coli
expression vectors include pTrc (Amann et al., Gene 69:301-315
(1988)) and pET 11d (Studier et al., Gene Expression Technology:
Methods in Enzymology 185:60-89 (1990)).
[0229] Recombinant protein expression can be maximized in host
bacteria by providing a genetic background wherein the host cell
has an impaired capacity to proteolytically cleave the recombinant
protein. (Gottesman, S., Gene Expression Technology: Methods in
Enzymology 185, Academic Press, San Diego, Calif. (1990) 119-128).
Alternatively, the sequence of the nucleic acid molecule of
interest can be altered to provide preferential codon usage for a
specific host cell, for example E. coli. (Wada et al., Nucleic
Acids Res. 20:2111-2118 (1992)).
[0230] The nucleic acid molecules can also be expressed by
expression vectors that are operative in yeast. Examples of vectors
for expression in yeast e.g., S. cerevisiae include pYepSec1
(Baldari, et al., EMBO J. 6:229-234 (1987)), pMFa (Kurjan et al.,
Cell 30:933-943(1982)), pJRY88 (Schultz et al., Gene 54:113-123
(1987)), and pYES2 (Invitrogen Corporation, San Diego, Calif.).
[0231] The nucleic acid molecules can also be expressed in insect
cells using, for example, baculovirus expression vectors.
Baculovirus vectors available for expression of proteins in
cultured insect cells (e.g., Sf9 cells) include the pAc series
(Smith et al., Mol. Cell. Biol. 3:2156-2165 (1983)) and the pVL
series (Lucklow et al., Virology 170:31-39 (1989)).
[0232] In certain embodiments of the invention, the nucleic acid
molecules described herein are expressed in mammalian cells using
mammalian expression vectors. Examples of mammalian expression
vectors include pCDM8 (Seed, B. Nature 329:840(1987)) and pMT2PC
Kaufman et al., EMBO J. 6:187-195 (1987)).
[0233] The expression vectors listed herein are provided by way of
example only of the well-known vectors available to those of
ordinary skill in the art that would be useful to express the
nucleic acid molecules. The person of ordinary skill in the art
would be aware of other vectors suitable for maintenance
propagation or expression of the nucleic acid molecules described
herein. These are found for example in Sambrook, J., Fritsh, E. F.,
and Maniatis, T. Molecular Cloning: A Laboratory Manual. 2nd, ed.,
Cold Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press,
Cold Spring Harbor, N.Y., 1989.
[0234] The invention also encompasses vectors in which the nucleic
acid sequences described herein are cloned into the vector in
reverse orientation, but operably linked to a regulatory sequence
that permits transcription of antisense RNA. Thus, an antisense
transcript can be produced to all, or to a portion, of the nucleic
acid molecule sequences described herein, including both coding and
non-coding regions. Expression of this antisense RNA is subject to
each of the parameters described above in relation to expression of
the sense RNA (regulatory sequences, constitutive or inducible
expression, tissue-specific expression).
[0235] The invention also relates to recombinant host cells
containing the vectors described herein. Host cells therefore
include prokaryotic cells, lower eukaryotic cells such as yeast,
other eukaryotic cells such as insect cells, and higher eukaryotic
cells such as mammalian cells.
[0236] The recombinant host cells are prepared by introducing the
vector constructs described herein into the cells by techniques
readily available to the person of ordinary skill in the art. These
include, but are not limited to, calcium phosphate transfection,
DEAE-dextran-mediated transfection, cationic lipid-mediated
transfection, electroporation, transduction, infection,
lipofection, and other techniques such as those found in Sambrook,
et al. (Molecular Cloning: A Laboratory Manual. 2nd, ed., Cold
Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press, Cold
Spring Harbor, N.Y., 1989).
[0237] Host cells can contain more than one vector. Thus, different
nucleotide sequences can be introduced on different vectors of the
same cell. Similarly, the nucleic acid molecules can be introduced
either alone or with other nucleic acid molecules that are not
related to the nucleic acid molecules such as those providing
trans-acting factors for expression vectors. When more than one
vector is introduced into a cell, the vectors can be introduced
independently, co-introduced or joined to the nucleic acid molecule
vector.
[0238] In the case of bacteriophage and viral vectors, these can be
introduced into cells as packaged or encapsulated virus by standard
procedures for infection and transduction. Viral vectors can be
replication-competent or replication-defective. In the case in
which viral replication is defective, replication will occur in
host cells providing functions that complement the defects.
[0239] Vectors generally include selectable markers that enable the
selection of the subpopulation of cells that contain the
recombinant vector constructs. The marker can be contained in the
same vector that contains the nucleic acid molecules described
herein or may be on a separate vector. Markers include tetracycline
or ampicillin-resistance genes for prokaryotic host cells and
dihydrofolate reductase or neomycin resistance for eukaryotic host
cells. However, any marker that provides selection for a phenotypic
trait will be effective.
[0240] While the mature proteins can be produced in bacteria,
yeast, mammalian cells, and other cells under the control of the
appropriate regulatory sequences, cell-free transcription and
translation systems can also be used to produce these proteins
using RNA derived from the DNA constructs described herein.
[0241] Where secretion of the peptide is desired, which is
difficult to achieve with multi-transmembrane domain containing
proteins such as transporters, appropriate secretion signals are
incorporated into the vector. The signal sequence can be endogenous
to the peptides or heterologous to these peptides.
[0242] Where the peptide is not secreted into the medium, which is
typically the case with transporters, the protein can be isolated
from the host cell by standard disruption procedures, including
freeze thaw, sonication, mechanical disruption, use of lysing
agents and the like. The peptide can then be recovered and purified
by well-known purification methods including ammonium sulfate
precipitation, acid extraction, anion or cationic exchange
chromatography, phosphocellulose chromatography,
hydrophobic-interaction chromatography, affinity chromatography,
hydroxylapatite chromatography, lectin chromatography, or high
performance liquid chromatography.
[0243] It is also understood that depending upon the host cell in
recombinant production of the peptides described herein, the
peptides can have various glycosylation patterns, depending upon
the cell, or maybe non-glycosylated as when produced in bacteria.
In addition, the peptides may include an initial
modified-methionine in some cases as a result of a host-mediated
process.
[0244] Uses of Vectors and Host Cells
[0245] The recombinant host cells expressing the peptides described
herein have a variety of uses. First, the cells are useful for
producing a transporter protein or peptide that can be further
purified to produce desired amounts of transporter protein or
fragments. Thus, host cells containing expression vectors are
useful for peptide production.
[0246] Host cells are also useful for conducting cell-based assays
involving the transporter protein or transporter protein fragments,
such as those described above as well as other formats known in the
art. Thus, a recombinant host cell expressing a native transporter
protein is useful for assaying compounds that stimulate or inhibit
transporter protein function.
[0247] Host cells are also useful for identifying transporter
protein mutants in which these functions are affected. If the
mutants naturally occur and give rise to a pathology, host cells
containing the mutations are useful to assay compounds that have a
desired effect on the mutant transporter protein (for example,
stimulating or inhibiting function) which may not be indicated by
their effect on the native transporter protein.
[0248] Genetically engineered host cells can be further used to
produce non-human transgenic animals. A transgenic animal is
preferably a mammal, for example a rodent, such as a rat or mouse,
in which one or more of the cells of the animal include a
transgene. A transgene is exogenous DNA that is integrated into the
genome of a cell from which a transgenic animal develops and which
remains in the genome of the mature animal in one or more cell
types or tissues of the transgenic animal. These animals are useful
for studying the function of a transporter protein and identifying
and evaluating modulators of transporter protein activity. Other
examples of transgenic animals include non-human primates, sheep,
dogs, cows, goats, chickens, and amphibians.
[0249] A transgenic animal can be produced by introducing nucleic
acid into the male pronuclei of a fertilized oocyte, e.g., by
microinjection, retroviral infection, and allowing the oocyte to
develop in a pseudopregnant female foster animal. Any of the
transporter protein nucleotide sequences can be introduced as a
transgene into the genome of a non-human animal, such as a
mouse.
[0250] Any of the regulatory or other sequences useful in
expression vectors can form part of the transgenic sequence. This
includes intronic sequences and polyadenylation signals, if not
already included. A tissue-specific regulatory sequence(s) can be
operably linked to the transgene to direct expression of the
transporter protein to particular cells.
[0251] Methods for generating transgenic animals via embryo
manipulation and microinjection, particularly animals such as mice,
have become conventional in the art and are described, for example,
in U.S. Pat. Nos. 4,736,866 and 4,870,009, both by leder et al.,
U.S. Pat. No. 4,873,191 by Wagner et al. and in Hogan, B.,
Manipulating the Mouse Embryo, (Cold Spring Harbor Laboratory
Press, Cold Spring Harbor, N.Y., 1986). Similar methods are used
for production of other transgenic animals. A transgenic founder
animal can be identified based upon the presence of the transgene
in its genome and/or expression of transgenic mRNA in tissues or
cells of the animals. A transgenic founder animal can then be used
to breed additional animals carrying the transgene. Moreover,
transgenic animals carrying a transgene can further be bred to
other transgenic animals carrying other transgenes. A transgenic
animal also includes animals in which the entire animal or tissues
in the animal have been produced using the homologously recombinant
host cells described herein.
[0252] In another embodiment, transgenic non-human animals can be
produced which contain selected systems that allow for regulated
expression of the transgene. One example of such a system is the
cre/loxP recombinase system of bacteriophage P1. For a description
of the cre/loxP recombinase system, see, e.g., Lakso et al. PNAS
89:6232-6236 (1992). Another example of a recombinase system is the
FLP recombinase system of S. cerevisiae (O'Gorman et al. Science
251:1351-1355 (1991). If a cre/loxP recombinase system is used to
regulate expression of the transgene, animals containing transgenes
encoding both the Cre recombinase and a selected protein is
required. Such animals can be provided through the construction of
"double" transgenic animals, e.g., by mating two transgenic
animals, one containing a transgene encoding a selected protein and
the other containing a transgene encoding a recombinase.
[0253] Clones of the non-human transgenic animals described herein
can also be produced according to the methods described in Wilmut,
I. et al. Nature 385:810-813 (1997) and PCT International
Publication Nos. WO 97/07668 and WO 97/07669. In brief, a cell,
e.g., a somatic cell, from the transgenic animal can be isolated
and induced to exit the growth cycle and enter G.sub.o phase. The
quiescent cell can then be fused, e.g., through the use of
electrical pulses, to an enucleated oocyte from an animal of the
same species from which the quiescent cell is isolated. The
reconstructed oocyte is then cultured such that it develops to
morula or blastocyst and then transferred to pseudopregnant female
foster animal. The offspring born of this female foster animal will
be a clone of the animal from which the cell, e.g., the somatic
cell, is isolated.
[0254] Transgenic animals containing recombinant cells that express
the peptides described herein are useful to conduct the assays
described herein in an in vivo context. Accordingly, the various
physiological factors that are present in vivo and that could
effect ligand binding, transporter protein activation, and signal
transduction, may not be evident from in vitro cell-free or
cell-based assays. Accordingly, it is useful to provide non-human
transgenic animals to assay in vivo transporter protein function,
including ligand interaction, the effect of specific mutant
transporter proteins on transporter protein function and ligand
interaction, and the effect of chimeric transporter proteins. It is
also possible to assess the effect of null mutations, that is
mutations that substantially or completely eliminate one or more
transporter protein functions.
[0255] All publications and patents mentioned in the above
specification are herein incorporated by reference. Various
modifications and variations of the described method and system of
the invention will be apparent to those skilled in the art without
departing from the scope and spirit of the invention. Although the
invention has been described in connection with specific preferred
embodiments, it should be understood that the invention as claimed
should not be unduly limited to such specific embodiments. Indeed,
various modifications of the above-described modes for carrying out
the invention which are obvious to those skilled in the field of
molecular biology or related fields are intended to be within the
scope of the following claims.
Sequence CWU 1
1
49 1 1473 DNA Homo sapiens 1 atgacccagg ggaagaagaa gaaacgggcc
gcgaaccgca gtatcatgct ggccaagaag 60 atcatcatta aggacggagg
cacgcctcaa ggaataggtt ctcctagtgt ctatcatgca 120 gttatcgtca
tctttttgga gttttttgct tggggactat tgacagcacc caccttggtg 180
gtattacatg aaacctttcc taaacataca tttctgatga acggcttaat tcaaggagta
240 aagggtttgt tgtcattcct tagtgccccg cttattggtg ctctttctga
tgtttggggc 300 cgaaaatcct tcttgctgct aacggtgttt ttcacatgtg
ccccaattcc tttaatgaag 360 atcagcccat ggtggtactt tgctgttatc
tctgtttctg gggtttttgc agtgactttt 420 tctgtggtat ttgcatacgt
agcagatata acccaagagc atgaaagaag tatggcttat 480 ggactggttt
cagcaacatt tgctgcaagt ttagtcacca gtcctgcaat tggagcttat 540
cttggacgag tatatgggga cagcttggtg gtggtcttag ctacagcaat agctttgcta
600 gatatttgtt ttatccttgt tgctgtgcca gagtcgttgc ctgagaaaat
gcggccagca 660 tcctggggag cacccatttc ctgggaacaa gctgaccctt
ttgcgtcctt aaaaaaagtc 720 ggccaagatt ccatagtgct gctgatctgc
attacagtgt ttctctccta cctaccggag 780 gcaggccaat attccagctt
ttttttatac ctcagacaga taatgaaatt ttcaccagaa 840 agtgttgcag
cgtttatagc agtccttggc attctttcca ttattgcaca gaccatagtc 900
ttgagtttac ttatgaggtc aattggaaat aagaacacca ttttactggg tctaggattt
960 caaatattac agttggcatg gtatggcttt ggttcagaac cttggatgat
gtgggctgct 1020 ggggcagtag cagccatgtc tagcatcacc tttcctgctg
tcagtgcact tgtttcacga 1080 actgctgatg ctgatcaaca gggtgtcgtt
caaggaatga taacaggaat tcgaggatta 1140 tgcaatggtc tgggaccggc
cctctatgga ttcattttct acatattcca tgtggaactt 1200 aaagaactgc
caataacagg aacagacttg ggaacaaaca caagccctca gcaccacttt 1260
gaacagaatt ccatcatccc tggccctccc ttcctatttg gagcctgttc agtactgctg
1320 gctctgcttg ttgccttgtt tattccggaa cataccaatt taagcttaag
gtccagcagt 1380 tggagaaagc actgtggcag tcacagccat cctcataata
cacaagcgcc aggagaggcc 1440 aaagaacctt tactccagga cacaaatgtg tga
1473 2 1377 DNA Homo sapiens 2 atgacccagg ggaagaagaa gaaacgggcc
gcgaaccgca gtatcatgct ggccaagaag 60 atcatcatta aggacggagg
cacggtatta catgaaacct ttcctaaaca tacatttctg 120 atgaacggct
taattcaagg agtaaagggt ttgttgtcat tccttagtgc cccgcttatt 180
ggtgctcttt ctgatgtttg gggccgaaaa tccttcttgc tgctaacggt gtttttcaca
240 tgtgccccaa ttcctttaat gaagatcagc ccatggtggt actttgctgt
tatctctgtt 300 tctggggttt ttgcagtgac tttttctgtg gtatttgcat
acgtagcaga tataacccaa 360 gagcatgaaa gaagtatggc ttatggactg
gtttcagcaa catttgctgc aagtttagtc 420 accagtcctg caattggagc
ttatcttgga cgagtatatg gggacagctt ggtggtggtc 480 ttagctacag
caatagcttt gctagatatt tgttttatcc ttgttgctgt gccagagtcg 540
ttgcctgaga aaatgcggcc agcatcctgg ggagcaccca tttcctggga acaagctgac
600 ccttttgcgt ccttaaaaaa agtcggccaa gattccatag tgctgctgat
ctgcattaca 660 gtgtttctct cctacctacc ggaggcaggc caatattcca
gctttttttt atacctcaga 720 cagataatga aattttcacc agaaagtgtt
gcagcgttta tagcagtcct tggcattctt 780 tccattattg cacagaccat
agtcttgagt ttacttatga ggtcaattgg aaataagaac 840 accattttac
tgggtctagg atttcaaata ttacagttgg catggtatgg ctttggttca 900
gaaccttgga tgatgtgggc tgctggggca gtagcagcca tgtctagcat cacctttcct
960 gctgtcagtg cacttgtttc acgaactgct gatgctgatc aacagggtgt
cgttcaagga 1020 atgataacag gaattcgagg attatgcaat ggtctgggac
cggccctcta tggattcatt 1080 ttctacatat tccatgtgga acttaaagaa
ctgccaataa caggaacaga cttgggaaca 1140 aacacaagcc ctcagcacca
ctttgaacag aattccatca tccctggccc tcccttccta 1200 tttggagcct
gttcagtact gctggctctg cttgttgcct tgtttattcc ggaacatacc 1260
aatttaagct taaggtccag cagttggaga aagcactgtg gcagtcacag ccatcctcat
1320 aatacacaag cgccaggaga ggccaaagaa cctttactcc aggacacaaa tgtgtga
1377 3 490 PRT Homo sapiens 3 Met Thr Gln Gly Lys Lys Lys Lys Arg
Ala Ala Asn Arg Ser Ile Met 1 5 10 15 Leu Ala Lys Lys Ile Ile Ile
Lys Asp Gly Gly Thr Pro Gln Gly Ile 20 25 30 Gly Ser Pro Ser Val
Tyr His Ala Val Ile Val Ile Phe Leu Glu Phe 35 40 45 Phe Ala Trp
Gly Leu Leu Thr Ala Pro Thr Leu Val Val Leu His Glu 50 55 60 Thr
Phe Pro Lys His Thr Phe Leu Met Asn Gly Leu Ile Gln Gly Val 65 70
75 80 Lys Gly Leu Leu Ser Phe Leu Ser Ala Pro Leu Ile Gly Ala Leu
Ser 85 90 95 Asp Val Trp Gly Arg Lys Ser Phe Leu Leu Leu Thr Val
Phe Phe Thr 100 105 110 Cys Ala Pro Ile Pro Leu Met Lys Ile Ser Pro
Trp Trp Tyr Phe Ala 115 120 125 Val Ile Ser Val Ser Gly Val Phe Ala
Val Thr Phe Ser Val Val Phe 130 135 140 Ala Tyr Val Ala Asp Ile Thr
Gln Glu His Glu Arg Ser Met Ala Tyr 145 150 155 160 Gly Leu Val Ser
Ala Thr Phe Ala Ala Ser Leu Val Thr Ser Pro Ala 165 170 175 Ile Gly
Ala Tyr Leu Gly Arg Val Tyr Gly Asp Ser Leu Val Val Val 180 185 190
Leu Ala Thr Ala Ile Ala Leu Leu Asp Ile Cys Phe Ile Leu Val Ala 195
200 205 Val Pro Glu Ser Leu Pro Glu Lys Met Arg Pro Ala Ser Trp Gly
Ala 210 215 220 Pro Ile Ser Trp Glu Gln Ala Asp Pro Phe Ala Ser Leu
Lys Lys Val 225 230 235 240 Gly Gln Asp Ser Ile Val Leu Leu Ile Cys
Ile Thr Val Phe Leu Ser 245 250 255 Tyr Leu Pro Glu Ala Gly Gln Tyr
Ser Ser Phe Phe Leu Tyr Leu Arg 260 265 270 Gln Ile Met Lys Phe Ser
Pro Glu Ser Val Ala Ala Phe Ile Ala Val 275 280 285 Leu Gly Ile Leu
Ser Ile Ile Ala Gln Thr Ile Val Leu Ser Leu Leu 290 295 300 Met Arg
Ser Ile Gly Asn Lys Asn Thr Ile Leu Leu Gly Leu Gly Phe 305 310 315
320 Gln Ile Leu Gln Leu Ala Trp Tyr Gly Phe Gly Ser Glu Pro Trp Met
325 330 335 Met Trp Ala Ala Gly Ala Val Ala Ala Met Ser Ser Ile Thr
Phe Pro 340 345 350 Ala Val Ser Ala Leu Val Ser Arg Thr Ala Asp Ala
Asp Gln Gln Gly 355 360 365 Val Val Gln Gly Met Ile Thr Gly Ile Arg
Gly Leu Cys Asn Gly Leu 370 375 380 Gly Pro Ala Leu Tyr Gly Phe Ile
Phe Tyr Ile Phe His Val Glu Leu 385 390 395 400 Lys Glu Leu Pro Ile
Thr Gly Thr Asp Leu Gly Thr Asn Thr Ser Pro 405 410 415 Gln His His
Phe Glu Gln Asn Ser Ile Ile Pro Gly Pro Pro Phe Leu 420 425 430 Phe
Gly Ala Cys Ser Val Leu Leu Ala Leu Leu Val Ala Leu Phe Ile 435 440
445 Pro Glu His Thr Asn Leu Ser Leu Arg Ser Ser Ser Trp Arg Lys His
450 455 460 Cys Gly Ser His Ser His Pro His Asn Thr Gln Ala Pro Gly
Glu Ala 465 470 475 480 Lys Glu Pro Leu Leu Gln Asp Thr Asn Val 485
490 4 458 PRT Homo sapiens 4 Met Thr Gln Gly Lys Lys Lys Lys Arg
Ala Ala Asn Arg Ser Ile Met 1 5 10 15 Leu Ala Lys Lys Ile Ile Ile
Lys Asp Gly Gly Thr Val Leu His Glu 20 25 30 Thr Phe Pro Lys His
Thr Phe Leu Met Asn Gly Leu Ile Gln Gly Val 35 40 45 Lys Gly Leu
Leu Ser Phe Leu Ser Ala Pro Leu Ile Gly Ala Leu Ser 50 55 60 Asp
Val Trp Gly Arg Lys Ser Phe Leu Leu Leu Thr Val Phe Phe Thr 65 70
75 80 Cys Ala Pro Ile Pro Leu Met Lys Ile Ser Pro Trp Trp Tyr Phe
Ala 85 90 95 Val Ile Ser Val Ser Gly Val Phe Ala Val Thr Phe Ser
Val Val Phe 100 105 110 Ala Tyr Val Ala Asp Ile Thr Gln Glu His Glu
Arg Ser Met Ala Tyr 115 120 125 Gly Leu Val Ser Ala Thr Phe Ala Ala
Ser Leu Val Thr Ser Pro Ala 130 135 140 Ile Gly Ala Tyr Leu Gly Arg
Val Tyr Gly Asp Ser Leu Val Val Val 145 150 155 160 Leu Ala Thr Ala
Ile Ala Leu Leu Asp Ile Cys Phe Ile Leu Val Ala 165 170 175 Val Pro
Glu Ser Leu Pro Glu Lys Met Arg Pro Ala Ser Trp Gly Ala 180 185 190
Pro Ile Ser Trp Glu Gln Ala Asp Pro Phe Ala Ser Leu Lys Lys Val 195
200 205 Gly Gln Asp Ser Ile Val Leu Leu Ile Cys Ile Thr Val Phe Leu
Ser 210 215 220 Tyr Leu Pro Glu Ala Gly Gln Tyr Ser Ser Phe Phe Leu
Tyr Leu Arg 225 230 235 240 Gln Ile Met Lys Phe Ser Pro Glu Ser Val
Ala Ala Phe Ile Ala Val 245 250 255 Leu Gly Ile Leu Ser Ile Ile Ala
Gln Thr Ile Val Leu Ser Leu Leu 260 265 270 Met Arg Ser Ile Gly Asn
Lys Asn Thr Ile Leu Leu Gly Leu Gly Phe 275 280 285 Gln Ile Leu Gln
Leu Ala Trp Tyr Gly Phe Gly Ser Glu Pro Trp Met 290 295 300 Met Trp
Ala Ala Gly Ala Val Ala Ala Met Ser Ser Ile Thr Phe Pro 305 310 315
320 Ala Val Ser Ala Leu Val Ser Arg Thr Ala Asp Ala Asp Gln Gln Gly
325 330 335 Val Val Gln Gly Met Ile Thr Gly Ile Arg Gly Leu Cys Asn
Gly Leu 340 345 350 Gly Pro Ala Leu Tyr Gly Phe Ile Phe Tyr Ile Phe
His Val Glu Leu 355 360 365 Lys Glu Leu Pro Ile Thr Gly Thr Asp Leu
Gly Thr Asn Thr Ser Pro 370 375 380 Gln His His Phe Glu Gln Asn Ser
Ile Ile Pro Gly Pro Pro Phe Leu 385 390 395 400 Phe Gly Ala Cys Ser
Val Leu Leu Ala Leu Leu Val Ala Leu Phe Ile 405 410 415 Pro Glu His
Thr Asn Leu Ser Leu Arg Ser Ser Ser Trp Arg Lys His 420 425 430 Cys
Gly Ser His Ser His Pro His Asn Thr Gln Ala Pro Gly Glu Ala 435 440
445 Lys Glu Pro Leu Leu Gln Asp Thr Asn Val 450 455 5 49984 DNA
Homo sapiens 5 agtcatactg tattttttac ttgtattttt gttgttttgt
gggatttaaa aaatattttt 60 attctgagga tagttgaatc cacaggatac
tgagggccag ctgtattcac aacccaaatc 120 acatacaaag cgacaagttc
atacacaata ggcctattag aacaggactg ttctctcttg 180 tttatcattg
cagcctttct agcacaaagc ctgggacatt ctggacattt agtatgtgtt 240
aaatttctct tactacatta tttccaacag tatttactgc aatctgcaat taccttcctt
300 ttgttttgta actgtgtccc ccactagaat gtaagctctg tgcagatagt
gtctcattta 360 ttgatgtatc cctggcatct aataaaacac tgacaacaca
agcacccagt aaatattttt 420 tgaatgactg aacaataacc agttcataag
gctgataaaa ttggtatagc tagatgaagt 480 atgattttga gggactatga
aaatcaaagt aaccacacaa taaattatca gccctctact 540 tccattcaaa
acaagctcct gggaattgaa ttatgaaatc tatcatatta ctttctctaa 600
agaacttcaa gttgggtgtc aactaaaaag ttgcaggcga ggcgcggtgg ctcaaacctg
660 taatcccagc actttggtag aactgagtat ctcttgaggc caggtttgaa
accagcctgg 720 tcaacataac cagactctgt ctttacaaaa gaaaaattaa
aattagccag gcatggtggt 780 gtgcatttgt agtcccagat acttgagacg
ctgaggcaga aggatcgttt cggaagaggc 840 tgcaggaggc catgatggca
ccactgcact ccagcctggg tgacagagtg agaccctgcc 900 tcagaaaata
ataataggcc acgcatggtg gctcacacct gtaatcccag cactttggga 960
ggctggggcg ggaacatcac ctcaggtaag gagttcaagc ctggccaaca cggtgaaatt
1020 ccatctctac taaaaataca aaaaaaatta gccaggcatg gtagtgggga
cctgtaatcc 1080 cagctactcg ggaggctgag gcaggagaat cacttgaacc
tgggagctgg aagttgcagt 1140 gagccaagtt ggcactattg cactgcagcc
tgggcaacaa gagcaaaact ctgtctcaaa 1200 aaataaataa taaaaaaagt
ttcaaaatga gaatatatgt ttcaaaacaa gtataatgaa 1260 tatacttatt
gattggaaaa tataattaga agtatctatc aggctataaa ttgcttttct 1320
tctcccttcc atggaaatta gttttttttt ccatttttag tcagtatgaa aatacaagga
1380 aaaggaaatt caatcaaatt tactttttaa cattttattt ggaaataatt
tcaaacttac 1440 agaaaagttg caaaaacagt acaaagaact catacattca
tttactgttt ttccttttac 1500 cctatatatt agttatttat agctgtgtaa
caaataaccc caaagcttag tggcttacac 1560 caagtacttt tcatcttaca
ctgtttctga gtcaggattc caggagtggc taagctaggt 1620 ggtcctacct
ctgggtctct catgaagttg tagtcagcca aaggcttgac caaggttgga 1680
ggatctactt ccaaagtgac tcactccgtg gcatttggta ggaggctaca aacagttcct
1740 ggacaactgg atctctccat aggctgcttg agtgtcctga aaacacggaa
gcaggcttcc 1800 ccaggctcca agccccaaaa tgaatgaaaa agagacccgc
aaaggaagat gcagtgcctt 1860 ttatgaccta gcctctgaag tcaatactgt
cacttctgtt ttgatctatc aagagtcact 1920 aagcctagtc tacactcaag
gggaggggaa ttagagtcca cctcttccag ggaggaatat 1980 cattgaatct
gtgaacatat cttagaacta ccatacctag tttcagtact tttaaacatt 2040
cgccattttg ctttgtccct ctcttttccc cacctacata tacatacaca tacatgttac
2100 tccctaacca tctgagagta gggagcatgc ggtgtatccc tatccctcgt
gtttttctct 2160 taaggaaaag gatattctat tatacaacac ggtagttatc
aatatctaat tttaacattg 2220 tgatacttta aagtccactt ccacttgtgt
aaattgccct ttctagcaat gttcccatca 2280 aatttatttt taaacaatac
agtaaaaacg tagagggcca caaagggtga catcggtcag 2340 gtaaggtatt
ttttttggca gggaataaaa aaggtcctgg gtctagggag gtaaacaagc 2400
gtgagccagc tgagttctag cgggggtccc tgaacaccaa aaggacaaga ctgtttctga
2460 aacactacat tatctcttaa gttacccatt acttacggaa aatgattttt
tactgttccc 2520 ttcggttcct gtcttggtta gaacacagct ggagattgtg
ttaatagctt aggacgtctg 2580 tttccgtgag caggtaacaa ctttttgaaa
caaattccct catctgctga agaaggggga 2640 caaaaacggc ccctatcgcc
cagaaccgtt gcgaggattt agctagctgg tgacgccgga 2700 gcacgaagtt
gtacaggtag ccagcagcac ccacgcgagc ccgcggttac cctggccgcg 2760
cggctactgt agagtgggct ggcggcgagc gggcggggcg gtatcacgcg ggaggggcgg
2820 ggcccgctcg tcggctgatc gcacgattgt gacgcgccgc cggaggcagg
ccgggccctc 2880 aagatggcgg cgggcgccca gagcggctcg gcccggcagt
agtggtggga cggcactagc 2940 tgctggggcc tgccgccccg ggagtggctg
cagcagcgcc aggaatcgag gatggtaaaa 3000 tgacccaggg gaagaagaag
aaacgggccg cgaaccgcag tatcatgctg gccaagaaga 3060 tcatcattaa
ggacggaggc acggtgagct gagttccgcg ccggcgagcg tccctcgggg 3120
cccccatccg gtctctcctt cagaccccca cactgccgtc tctaggcgtc ccggtgcctc
3180 cctcccttcc cccaccctgt ccgagctgcc ggtgcctcgg ggtcgcggac
ccgcatgccg 3240 ccgctccggg aatcgtcctc cgctgctcgg gcttgcggcc
tccggggccc gtcctctttc 3300 tttcccgcac ctgccgccct ctgctctggc
cgcctctgca ggccctgcgg cctcgaaccc 3360 cacgtgcgcc tccgccgcgg
ggaggaatgt gcggggctcc cccggcggcc cgcccgccgc 3420 gcccctcgtc
gccgcagcct cgcctcgcct tcgccgccag gccccgcgga gccgtcgccg 3480
cgcttgtcaa ggggctggga accatccctg ctctcccata tgttgctaac ggggtggcgt
3540 ctggcgcggg gatcccgctg cggccccgta gtacgttcgc tttctgtttc
cacgtctctc 3600 tgcgtcggtg ctccggctct gggctgctta cagtaaaccc
tgaccggaga tgggcttccc 3660 tcacttcccg gagtcggaag catgacggca
gacacctggg gcctacattc gaacctgcta 3720 gttttcaaag aaaagtcatc
actgtgtgtc ttaagatcaa aagtattaga atcagtcatg 3780 gcctaaggat
cggaggagga cactttgaag ggaagaaagg tttgcttttt agaaacagtt 3840
gtcatcacag taaactttat gcagtgtgta gttaaccagc tggggacgta ggatttttaa
3900 ttgaaaaaca aaacaaaaca aaactgtttt atgctaacat ttctccgttg
ctacactgtg 3960 tggtctttgt tgcatccgct gataccgcgt tctgaaatag
aatggaaagg tgatatatat 4020 gtttcactta cctgaagtgt gcagaaattg
taccattaat tccatttctg tttatatctt 4080 attggagccg cgatcaactg
ctagcacagt agtaaatgtg taagtaggcc accattgagg 4140 atttgctgaa
ttcagttgaa aaacgtgaca aaattttatg acatttcaga acacggccca 4200
gtcaatatgc caaagtttag aaaacttgag acatatgtaa tgactttgga atatattttt
4260 agtttaacgt ttattatatg ttatagcttt gacatttatt gaaaaaaaga
aacaaattcc 4320 tcaagttctt tttattgaac ttgattaatt aaaacattac
tttgattaga tcggttatga 4380 agagtcatag ctcttttgac caagtaggta
agaactatgt ggggagaaaa atactgttgc 4440 ctttgtctac ctttagaaag
agacaatatt ttacattctt cataaaatct acaaaatagt 4500 ggcaatgaaa
gattgtattt tgtaagacca agtgatattt aagatcagta ttttttacaa 4560
aatgtaagaa tgaaactgat taagaaacac agcttccttt tccttggaaa gttcagtttt
4620 attacctttc tttggggttt tgtttgattt gctttacagc agatgctttc
tttccaaatc 4680 ctgtgagttt tggaaaagat cgtttttaaa ctttcttgtc
ctattattaa ggttgtaatt 4740 aattcttagc ctgctttggg acacaaaata
aaatgtttgc accagcaata ggtttcacat 4800 agaacaaatg aagacttttc
ttgagggctg tgaacatggg ggctattatc atttctcatc 4860 tttatacact
taatatttca ttctctattc taagagcact gggcactcct ttagaaaagg 4920
ggctttgttt tgtatgtttg gatcccacag ggcctagtat gtgaatttta aagtgataaa
4980 aacacttcta ttttgtacta gcacattcct agatgaattt ttattgtaat
tttgtttatt 5040 cttatacgta atcagaggat atatttcaat aaatatcagg
ggaatatttt gcattatttg 5100 tattttaatc catcccagct ttaaatttaa
aaagtataac tattgcagtc atagaaatga 5160 ttgtaaaatg gtagttgctt
atctacctct ctacttacaa tagttcagac tactattatg 5220 aacttttttt
gtttgtttgt ttgagatgga gtctcactct gttgcccagg ctggaggagt 5280
gcagtggcag gatctcggct cactgtaacc accgcctcct gggttcaagt gattctcctg
5340 cctcagcctc ccgagtagct gggactacag gcacgtgcca ccatgcctgg
ctaatttttt 5400 atattttcag tagagacaaa gtttcaccat attggtcagg
ctggtcttga actcctgacc 5460 tcatgattca cccaccttgg cctcccaaag
tgcagggatt acaggtgtga gccaccgtgc 5520 ccagactgaa cattttttaa
gaaaggggaa aaaattgcca tttgatactc tgttgttgtg 5580 tgttttttaa
ttcatcgtat catagaatat ttcagtgcta ttgctgttga cctcagagtt 5640
tcagagtttt tataaagttc cgccaatggg tagattcatt cagtgagatg tctgaggctc
5700 tatggtcggt acatgacagt cgtgaacagt atttcacata cctggtcaat
ggtactgatt 5760 tgatccccct tctgatttct tcttttcaac aatgttaata
aaattctttc ccgttgtcct 5820 gctaatgaca tatatgtaag cctatttggc
cagtttaaat atttataaac aaaactagta 5880 agagttgtta atgatttttc
tgaaaattag agcagattag agcagatttg tagttttcaa 5940 cggctgaaga
aataaatcct tctaaatgag ccagattaat cgtaagttac tgattttttt 6000
attgaaattg tatttcattg aattgtattt cattcagctg aatgaaaaac aggccaggat
6060 aaagctaaca agtaggctac ctatgtgagt agacacaatt aagataaatt
acattaaggt 6120 gtgtgatttt atattaggtg tttttaacct gggtctgttc
accctgaagt tgtttgcaaa 6180 attttctttt ggctatacat gtttcttgga
agagtcccaa aaggtccata cttcccaaaa 6240
gtttaagagc aattgttctg tttgaaaaca gcataagtaa ctaaagaata agttccacat
6300 attatattca gtaaatattt aatcatatac tgtatactac ttcactgatg
aaagtaacca 6360 tattagtgaa tttgctttta aagcatccat atatagaaat
agtttttagg ccaggggcag 6420 tggctcacgc ctgtaatccc agcactttgg
gaggccagtg tgggcagatc acttgaggcc 6480 aggagtctga gactagcctg
gccaacatgg tgaaacccca tctttaccaa aattacaaaa 6540 atgagctagg
tgtggtggta tgtgcctgta atcccagcta cccgggaggc cgaggcacga 6600
gaatcacttg aacctgggag gccaagattg cagtgagcct agatcacgcc actgcattcc
6660 agcctgggtg atggagtgaa actgtctcaa aaaaaaaaaa aaagaagttt
ttagttacag 6720 gttttcatgt atgtaacatt cagtgtaggt atttaagaca
gctgaaataa aaataccttc 6780 tgacattttc aaatactaga attctgtttt
gttttattaa agcattacca cttgttttta 6840 agcattcctg ttagaggcta
agagctaaag agttatttac agtattcaaa ttgaattttc 6900 cttatctttt
aaaatgctca tcttaaaata tgatctttat tgttttggcc atacaattgt 6960
ggaactacat ctctgacagt ggaaaatgta tagttctttc agaagtttgt ggtaaaatga
7020 ctttaaagat ttgatagaaa gtaaggcata tctgaattgc atggtcggaa
gtacctgaaa 7080 aaagtaaaat tgatatatca tttgaaaatg aaatgcatat
ccctggataa gcagagcacc 7140 agattttttt tttcttggca tccctgattt
taattaaata ggagtcagca accgtttcaa 7200 gagcaggacc caagctctga
ccctttgcac tcttcacctg caaggatggc tgaagtagtg 7260 gcaggaaagc
tctctgggat gtagggcctt tgtagaccca gagagctgtt aaataacctt 7320
tggttgctag catgcaagca ataagaaggg cctgtggtgc ttttcttttt ctttcttttt
7380 ttttttcttt tgagacagag ttttgctctt gttgctcagg ctggggtgca
atggcgtgat 7440 cttggctcac agcaacctct gcctccctgg ttcaaggaat
tctcctacct tagcctcctg 7500 aatagctggg attacaggca tgtgccatca
tgcccagcta atttttgtat ttttttagta 7560 gagaccggat tttaccatgt
tggccaggct ggtctcgaac tcttgacttc gggtgatcca 7620 cctgcctcag
tcttccaaag tgggattaca ggtgtcagcc actgcgcctg gccccgtggt 7680
gcttttcaaa aagcctagaa acatcagggt gtttatattg tctttggcag gtgtgtggct
7740 ggcagcatca ttaattactt agctccttac ctccatggtt cagtgtttgg
tttagattgg 7800 tgtgtttggg gataaattaa tatgcagttt ttttttcaga
tggctatatg catccagttc 7860 atcctcatgt agttagaaga cttgcatacc
aacataatca gaccgtctgc agaaattctc 7920 ctacagttga aatgtaactc
ctttgcagct actgaaagtt taaagtttaa gtaaaaaaat 7980 gaatagcttt
cttcaggtaa cattctgaca agtctgtatg atttaaaagt ttcaattata 8040
aggaactctg attgtctttt agcattattt taaattggaa gtgtgaaagt aacagttgac
8100 agtttcagcc agggtacatc aagaagagat gaatatgggt ataatatagc
tctcaaaatt 8160 tccagtactt tataacaaag aaatatccct cccactgccc
tgttttttaa aaaataaata 8220 atacatgttt tccttccagt cgtgggaaac
ttaatagaat ggttcaggag ggacaagtat 8280 atgcagcata cctgtcattt
tccattcaag ttttacttta tttttaaaat ttattatttt 8340 ttaaaatatt
tcaatagttt tggggtacag gtgggttttt ggttacatag atgtttttta 8400
gtgatgattt ctgagatttt agtgcacctg tcacctgacc agtgtatact gtacccaata
8460 tatagtcttt tatccctctc aagcttcccc cccatcctca aagtccattc
tattagtctt 8520 acgcctttgc gtcctcatag ctgaactctc acttgtaagt
gagaacatac gacatttggt 8580 tttccattcc tgaattactc acttagaata
atggcctcca attccatcca agtttctgca 8640 aaagacatta tttcattcct
ttttatggct aagtattcaa tggtatatat acaccacatt 8700 ttctttatcc
acttgttggt cattgggcac ttgggttggt tccatatctt tgcagttgtg 8760
aattgtgctg ctataaacat gcatgtacat gtgtcttttt catataatga cttcttttac
8820 tttgggtggg tacccagtag tgggattgct ggatcaaaca gtagttctat
ttttagttct 8880 ttaaggaatc gccatactgt tttccatagt ggttgtacta
gtttacattc ccaacagcag 8940 tgtcaaagtg ttcatttgtc accacatcca
caccatctat tattttttga tttttaaatt 9000 atggccattc ttgcaggagt
aaatgatatc tcattgtggt tttaatttgc atttccctga 9060 taattggtga
tgttgagcat cttttcatat gtttgttggc ttattgtatg ccttttgaaa 9120
aatgtctatt catgtctttt gcctactttt gatgggattg tttgtttttt ttcttgctga
9180 tttgagttcc ttgtagattc tgggtactag tcctttgtca gatgcacagt
tcataaatat 9240 tttctccaac tgtatgggtt gtctgtttac tctgctgatt
tttttttttt tttttttttg 9300 agatggaatt ttgctcttgt ttcccaggct
ggagtgcaat ggcatgatct tggctccctg 9360 caacctctgc ctctcaggtt
caagccattc tcctgcctca gcctcccaag tagctgggat 9420 tacaggcaca
caccaccatg cctggctaac ttttttgtat ttttagtaga gacgagtttt 9480
ctctatgttg gccaggctgg actcaaacta ctgaccttag gtgatccacc cgccttggcc
9540 tcccaagatg ctgggattac aggcatgcct aggcggctat aagtattttg
ctttatttct 9600 gggttatctg ttgtgttcca ttggtcttca tgcctatttt
tataccagta ccatgcggtt 9660 ttggtaactg tagccttttg tataatttaa
agtcgggtaa tgtgatgcct ccagatttgt 9720 tttttgctta gtcttgcttt
ggctatgtgg gctctttttt ggttccatat gaattttagg 9780 attgtttttt
cttgttctgt gaagtatgat gctggtattt tgatgggaat tgcattgaat 9840
ctatagattg ttttggtcag tatagtcatt ttcacaatgt tgattcttcc cttccatgaa
9900 catgggatgt gtttcccttt gtgtcattta tgatttcttt taacagtgtt
ttgtactttt 9960 ccttgtaaag atctttcact tccttggtta agtgtattcc
taggtgtttt gttttttttg 10020 cagctattgt aaaagggatt gagttcttga
tttgattctc agctttgtcg ttgctggaat 10080 atagcagtgc tattgatttg
tgtcattgat tttgtatcct gagactttac tgaatcgttt 10140 atcagatctc
ggagcttttt ggatgcgtca ttagggtttt ctaggtatac agtcatatca 10200
ttggcaaaca gtggcagttt gatttcctct tttccaattt gcatgctcgt tattcctttc
10260 tcttgtctga ttactctggt taggacttct aaatttttta attactatgg
gtacaaagta 10320 gatacagata tttatcaggt acatctgata ttttgataca
agcatatgtt gatacaggta 10380 tacagtgtat aataaatcag ggatactggg
gtatccatta cctcaaactt ttatcatttc 10440 tttgtgttag gaacatgcca
attccacttt tattttattt tattttttat tttttgagac 10500 agagtctcgc
tctgtcgccc aggcgacata catagtacag tagtgtactc cagcctgggt 10560
gacggggaga ctctgtctca aaataaataa ataaataaat aaataaatct gttcagacta
10620 atgtcctaga gtgtattccc aatgttttct tctagtcgtt tgtggtttca
ggttttagat 10680 ttaagtcttt aatccatttt gatttgattg ttgtacatgg
caagaggtag gggtataatt 10740 ttattcttct gtatatggat atccactttt
cctagcacca tttaggagac tatccttttc 10800 ccaatgtata cttcggtgcc
gttgtcaaaa atgagttgac tgtaaatgca tggatttatt 10860 tctgggttct
ctattgtgct ctattgtcta tgtatctgtt tttataccag tattatgctg 10920
ttttggttac tatcactttg tagtataatt tgaagtgaag taatgtgatt cctccaagcc
10980 tcggtttttt tttttttttt tttttttttt tttttatgag acagagtcta
gctctgtcgc 11040 ctaggctgga gtgcagtggc gcaatcttgg ctcactgcaa
cctctgcctc cctggttcaa 11100 gtgattctcc tgcctcagtt tcccgaggaa
ctgggattac aggtcccacc accacgcctg 11160 gctaattttt gtatttttag
tagagacggg gtttcacttt gatggccagg ctggtcttga 11220 actcctgacc
tcaggtgatc cgcccgcctt ggcctcccaa agtgctggga ttacaggcgt 11280
gagtcactgt gcccagcctc cagccttgtt ctttttgctc aggattgctt tggctgttct
11340 ggctcttgtg gttccatata agttttagga tttaaaagaa aaaattctgt
gaggaatgtc 11400 atttgtagtt tgatagtaac tgcattgaat ctgtagattg
cttttggtag tattaaaatt 11460 ttaacagtat tgattcttcc aatttatgaa
catgaaatat cttcccattt gtgtgtgtgt 11520 cctcttcaat tcgtgtcatc
aatgttttgt agtctgtaga catctttcac ttctttaagt 11580 ttattcttag
gtattacatc tgtagctatt gtaagtggga ttattttctt ggtttctttt 11640
tcagatattt gctgttggca tatagaaatg gtactgattt ttgtatcctg caacttcagt
11700 gaatttgctt ccattctgat agttttttgg tggagtattt agggttctct
ctatataagg 11760 tcatgtcatc tgtaaagagg gacagttttg acttcctgtt
ttctaatttg catgcctttt 11820 atttcttact catgcttaat tgctctagtt
ggtactttcc agtactttgt tgaataagag 11880 tggcgaaagt gggcatcttt
gtcttgttcc agatctttga ggaaaggctt tcaggttttc 11940 cctgttcagc
atgatagctc tgtgtctgtc atatatggct tttatcatat tgaggtatgt 12000
tccttctata ccatttttga gagtttttat gaagcagtgt tgaattttag taaatgcttt
12060 ttcatcatta attgaaatga tcattttatt ttccttcatt cttttgaaat
gatgtatcac 12120 cttgatagat ttatgtatgt tggactatcc tttcatacct
ggatgaatcc cacttgaaca 12180 tgatgaatga tttttttgtt tttaattttt
ttgagacgga gttttgctct tgttgcccag 12240 gctggaatgc aatggcgcaa
tcttggctca ccgcaacttc cgcctcccgc gttcaagcga 12300 ttctcctgcc
tcagcttcct gagtagctgg gattacaggc atgcgccacc acgcctggct 12360
aattttgtat ttttagtgga gacggggttt cttcatgttg gtcaggctgg tcttgaactc
12420 ctgacctcag gtgatccacc cgctttggcc tcccaaagtg ctggaattac
aggtgagagc 12480 cactgcgccc ggccgatgaa tgatcttttt taagacctcc
ttcctgaagg aggtttgcta 12540 gtattttgtt gaggattttt gcatcaatgt
tcatcagaga tattgtccca tagtttattt 12600 tgtttttctc catgctagtt
ttaggtaatt tttctcttaa ataaacaaag cattttcctc 12660 ctaaagtgca
agcatgctta ttagaaaaga tatggaaaat tcagaatagc atagtaaaca 12720
atgtgatatc acttaaaatc attacctaat ataaatttta tttacattga ggtcagtatt
12780 tattgttttt cagagttgaa attaccctac ctatacatgt tatatcctac
tttgattttt 12840 aaaaaaatta gcatgcttta agccctgaga agttgtacca
agctttctgc taggggctgg 12900 gtatatgtgg tggtgaacat ggtggacaaa
acaggtttaa agcttatcaa atttgtggcc 12960 aatttttttt tttttttcag
agtctctgtc gcccaggctg gggtgcagtg gtgggatctc 13020 aactcactgc
aacctctgcc tcccaggttc aagcgattct cctgcctcag cctttctgag 13080
tagctgggat tacaggcaca cgccaccatg cccagctaat ttttgtattt ttagtagaga
13140 cagggttttg ccatgttggc aaggctggtc tcgaactctt gacctcaagt
gatctgccca 13200 ccttggcctc ccaaagtgct gagattacag gcatgagcca
ccatgcctgg cctcctgtgg 13260 tctttttttg accttatatt actatgcttg
ttccatttga tactaggcat cacctcctcc 13320 ttcctgaaac tgctccattg
tcatatgtga cactgtattc tcttcactct cctgatattt 13380 tcttactgtt
ccttttatct tcctcttttc tttatcaaag aagaaaaacc ttcactattt 13440
tcctgtgcct cctacttaaa atgttggcgc ttcttggggt tctgtctcag cccactgctg
13500 ttttcacact tgacactcct gataatctca tctactctgg tggtttcaga
tatcacattt 13560 gctgctaatt gttttaatca gtgctcaaag acaatacaaa
tgtttcaagt aaagagggca 13620 gttttgtaga taggacctga agtaaatctg
agcctcgtgg ggggaagtgc tgggaagcca 13680 ccagctttaa ctgctagaca
accaagctaa acacttggaa gttgttcttg attctccctt 13740 ccgctattta
tcaagctcct cccaatttca aatcctgaat ccttaatccg ttccctcccc 13800
tccaacattc atactgtgcc actgttttat gccctcattt cttgtttgag ctgattcaga
13860 tagcttcctt ttagatgcgc tttgcttctc cattttatcc tttaggaaat
caccagagtg 13920 ataatactgc agtgagtctt aagacatctc tggcagcggt
ataaacttaa ttttgtattt 13980 tctttctcat gtatatcaaa ttccaaatct
cttacatact ttcgctgggg attgttctgc 14040 ttttgagcca tgttgatatc
gtgtttatat ttttgccact tgcttcattt atggtttttt 14100 tttttttttt
tggttacatc tttgccagaa taatcttaaa actttcatct gattgtgtca 14160
gtcttaatat cttttagtgg ctccccatgg ccttcagaat taaatataga ctccttagca
14220 tggaagctgg tctttgagta cctgtagctt gtctttcaat acacccaacg
tgcagcccat 14280 gcactggttg tactgaactc gatatatgag acccataatg
ccgcaagcct tggaagcttt 14340 gtacaggctg agccatcttt tccaccctat
acctccgcct gtctaactct gttgtgtcct 14400 ttcagccttc ctcctggaag
tctgatattt cccacctccc aagctccctt ggactctgta 14460 tgttccaact
gcatactgtg cttatgctaa tgaatttcgt tgttgccttg tctgtccctc 14520
tgactttgaa gacagaggca gtgagtacag atgtttgaca cagtgcccag tacatatatg
14580 atcttaatat ttgttgacta ttaacatcgt tgttattgtt aataattata
gaatgtactg 14640 ttaacttttt ttaacttttt aaaaaatctt gttttttata
gcctcaagga ataggttctc 14700 ctagtgtcta tcatgcagtt atcgtcatct
ttttggagtt ttttgcttgg ggactattga 14760 cagcacccac cttggtggta
agtaatcttt taaattattt aacactgact ccaaaatctc 14820 ttcttcttca
gttttggagg aaaatgtggg ccttttccct ttgcacggtt aattctccca 14880
ccagtattgt tcagtattca ccagtatttt actggttgtc ttttccaact gttaactctc
14940 ccttaccttt ttttgggagg ggggtggcgt ggaggtgttt gaatttggac
ttgtcactgg 15000 gcatgttcaa gcagaggctc tgtaactact ctgagtaaaa
tggaagagat tcttaaaccg 15060 acaggtttag aaaagatgat gtctgtgacc
tgcatgactc ggcataatta ctttgaggtt 15120 catttatgca gctgtacttt
ccaaaaacag gtttctgttc atttgggcta agtacctaga 15180 agggctattc
tttaatagat ctaagctgat tttacccaaa ttctcccagg tttgaaactt 15240
tagaaaagac ctccctgccc gaccaaacaa ctcagaagat agccagtttt cttatattgg
15300 tgtagataag gggaatggaa ggagggaagg actatctatg gtaaatatct
ataccatctt 15360 gaaaggagta attatgataa atgtacagtt taccaaatcc
tagaggaata gagttttaaa 15420 gtaatatact atgttttcat gaaggttttt
ataaaaaagt tatttaatag aaaaattatg 15480 taagtagatt gaactagcct
aagaacattt acagtacata tttcttgata tatttattga 15540 cagctgtgta
attgttacta tctatacata aaatattgat gtttagcagt tgcttatgcc 15600
tgtaatccca gcattttggg aggctgggtg ggcagatcgc ttgagctctg gagttgagac
15660 cagcctgggc aacatggtaa aaccttgtct ctacaaaaaa tgcaaaaatt
agttgtgcat 15720 ggtggcatat gtttgtagtc ccagctactc gggaggctaa
ggcaggagaa tcacttgagc 15780 ccaggaggca gaggttgtag tgacccgata
tcgtgccacc acactccagc ctgggcgacg 15840 ggagtgaaac cttgtctcaa
aaaaaaaaaa caaaaaaaaa aacagccggg cgcggtggct 15900 cacacctgta
atcccagtac tttgggaggc caaggcgggt ggatcacgag gtcaagagat 15960
tgagaccatc ctgaccaaca tggtgaaacc ctgtctctac taaaaataca aaaattagct
16020 gtgcgtggtg gtacgcacct gtaatcccag ctacttggga ggctgaggca
ggagaatctc 16080 ttgaacccgg gaagtggagg ttgcagtgag ccgagactgc
accactaccc tccagcctgg 16140 atacagggtg agactctgtc tcaaaaataa
aaagtcattt tgaatatata gagcatgttc 16200 atgagtattg ctataaaaaa
atatcagagg gttttttttt tttttttagt ttactgattt 16260 cagatagaaa
tctttaaaaa attaatttac acatttcctg gcttcataat ccaagtacaa 16320
cgatttggaa cttcctcaga tgatgcaagt tgattatgac attcataact tcattgaatt
16380 gtaataacct gtttttgtca agggttactg aagtgctgta ataacttttt
gggctcatga 16440 ctttacatta gctttcctaa tgcgccagcg tgctttttat
aatctgtcag tttaacatac 16500 aaatctgtct ggtagaccat cactcctacc
atttaaagta cttgagcttt gtaatagtaa 16560 acagcccacg tgtatttata
ttatgatgga tctaggcaca gtcctttaat gtattcaaag 16620 tggactatgt
taagcacagt cctaatgtat tccactttga atacattatc attttttcat 16680
ccttacaacc accttatcag tgagatatta gcctcataat acagatgagg aaaccggggc
16740 ttagaaaagt taagcaattt gattgctact ctgacagtaa gctgcagtgt
tggtatttgc 16800 acccaggctt ccttgactcc tccagtgctc agtcttttgg
ggaatgcagg tagtaacttg 16860 tttgtaccca tgttttagat agttgaggtt
gtcaggcagc ccaaccacta gctaagtagg 16920 gtgatcaaaa tgtggatgag
ctgttagcaa gctatgaaaa aaagcatttt gtgatgtttc 16980 cataatttgt
tatcagtatt tcaagtgtgt atagctattt ttaaaatttg cttcttgttt 17040
aaattttttt aggtatgtta tctttcgtgt tattttggta catttttttc ctagttggac
17100 aaagggaggc tatctttttt aagaacaagg aaggagtccc cttaattaga
aaggcttgtt 17160 tattcatttt tcatagacta atgtgcttaa tatattcctt
tttttttttt tttttttttt 17220 tgagacggag tctcgctctg tctgtcccca
ggctggagtg cagaggcacg atcttggctc 17280 actgcatccc ccacctccca
ggttcaagtg attttcctgc ctcagcctcc caagtagctg 17340 ggactacagg
cacatgccac catgcccagc taatttttgt acttttagta gagatggggt 17400
ttcaccatgt tgaccagaat ggtctcgatc tcttaacctc gtgatccgcc cgccttggcc
17460 tcccaaagtg ctgggattac aggtgtgagc cactgtgcct ggccaatata
ttcttattat 17520 ctttaatttt tgttttcttt ttcttttttt ttttattttg
tttgtttgtg tattttgaga 17580 tggagtctca ctctgttgcc caggctggag
tgcagtggtg caaccttggc tcactgcaac 17640 ctccacctcc caggttcaag
caattctcct gcctcagcct cccgagtagc tgggactata 17700 ggcacgtgcc
aacataccag gctaattttt gtatttttaa tagagacggg gtttcaccac 17760
attggccagg ctggtcttga actcctgacc tcaggtgatc cgcctgcctc ggcctcccag
17820 agtgttggga ttacaggcat aagccaccat gcccagcctg gcatatctac
tttttagaag 17880 tgaccctgtt atatattcag tatatgtcac taattaagaa
caatatatta attcaatatg 17940 ggctttttaa aaaggtttta ctcatttcaa
ggctttttgc ttacaaattt tgtttttttg 18000 ttgttggctt tgttggcagt
ctttgttttg ggccccagta ctcctcccac tcctccccag 18060 cattgtgtgt
gagaggtgtg taaagaggtg ggtttctggg taaaagaagg ctctcctctt 18120
aaaagtctgt taatctttaa acatttcatt tctgttttat gtgttttgaa actgattata
18180 aatggtgcat gccacaagag tcaaagtttt taacattcat tttaaaagga
aaatgaggat 18240 gaagacataa tttaatttat attttaagtc agtatctttc
atttccctgt ccctccctca 18300 acagttatat catagtttgt ttcagcattt
cagatttcaa agatattctt tgaagtattt 18360 ttttaatcag ataaccagtt
ttagacatat taattttgaa tgtctggttt gggatttatg 18420 atagccttaa
tttcttaatt tttaaaacta atgtgacatt ttaagaccaa aaaaactgtg 18480
tgttgcaatt atctttcact tttaagccct catagaacag tcaaaaaaca aaagctgtgt
18540 tttgtggaag atctgcccag gggaagatgg tgagcctcta ccaacaaggg
gatttagcta 18600 aaaagaagga ttttgtactg acaaatattt ttaaagattg
aggtctaaca cttttgagag 18660 gttatgaata tatggttggt catagtagat
agttcagtca gaatcagtga ttattgcttg 18720 attatgtaac atattagcta
agtgatgaga ataacagtag gtataaggat ctgtaatgcc 18780 aaggagtgga
atttaccggt tttttttttt ctttcctttt tttttttttt cattgagacg 18840
gagtcttaat ctggcatcca ggttggagtg cagtggcgtg atctcggctc actgcaacct
18900 ccaccgccaa ggttcaagag attctcctgc ctcagcctcc ccagtagctg
gaattacagg 18960 tgcatgtcac cacgcccagc taattttttt ttttattatt
ttttttgaga cagagtttca 19020 ctctgtcgtc taggctggaa ttcagtggca
ctatctcggc tcactgcaac cttcgcctcc 19080 caggttcaag cagttctctg
cctcagcctc ccaagtatgt gggattacag gcacctgcca 19140 ccatgcctgg
ctaatttttt tatttctagt agaggcgggg ttttaccatc ttggtcaggc 19200
tggtcttgaa ctccttacct tgtgatccac ccacctaagc ctcccaaagt gctgggatta
19260 caggcgtgag ccactgttcc tggccggctt tacccttttg acagacctat
ggctctggaa 19320 ataataggcc agtgtttgat ggttcaagct cctagataca
cagtccatgt tacggaacac 19380 tcaaaatcca ctagcatctc ttctacctag
atggtttcgt gtccttggct acagaaacag 19440 ccccaaagcg tttaacattt
taaggattat ttactttcaa catttttaaa gttaaaaaaa 19500 agttaagatc
cataaaattt tttggaaaag tgttacattt tctctgttca cctctaaaga 19560
ccagtgctaa aggatcctga catcaaaaat ctttacaaca ttcgaattac ttgttatatt
19620 tgtctgttaa aattttgtta gaaattgtat ggccccaaag gagaaattgc
tttggagaaa 19680 aaagttaggt agcagaggaa cagtttggaa gggttggggg
ttggccagat aaagaaaggg 19740 aagaaacatt caaaattgaa aggatgccgt
gtataaaata tgaatattgg aaagcataga 19800 atatttcaga aacagtgaag
cgaacagatt gattggaatg gaatacagct tggcaaagtg 19860 aatcattagt
gataagatct agcatagtat aaaacttctt atagacattc ataatgtttt 19920
tcattctttc taacaccaaa cctgttcttc atacctagaa agatttggct tgcagtaggc
19980 cctatgtgat tattgaaaga aaagcataat acatttgagt cccgtaaaaa
gttttgagat 20040 actagtttaa ggagtttaaa tcttatcctt tagcacaagg
actgggaaaa tatggctaga 20100 ggactagatc ttttttgcaa tttttttttt
ttttttgtag ttgcttctgg caactttctc 20160 tttgtgtgtg tgtttatatt
ccttttcaca agtatgttga attgaacttt ttcctaatta 20220 tcacttagct
acttagttaa tgcatgcagt agaactctaa aaagaacttc taggagtttc 20280
tcaaagacct cccagtaatt cttttcaatt agagagggca tgccattttt ccttttttat
20340 ttttaaataa tattttattt tttatttttg tgggtacata ggtgtatata
tttatggggg 20400 tacatgagat attttgatac aggcatacag tatgtaataa
ttacgtcagg gtaaatgggg 20460 tatccatcat ttcaagcatt tatcctttct
ttgtgttata aacaatccaa ttttaggttt 20520 tgttttgttt tgttttttgt
ttttttgaga cggagtcttg ctctgtcacc aggctggagt 20580 gcagtggcgc
gatctcagct tactgcaatc tctgcttcct ggattcaagc aattctcctg 20640
cctcagcctc ccaagtagct gggactacag gcacctgcca ccatacccag ctaatttttg
20700 tatttttagt agagatgggg tttcaccgta ttggccagga tggtctcaat
ctcttgacct 20760 tgtgctctgc ccgcctcagc ctcccaaggt gctgggatta
caggcgtgag ccaccacgcc 20820 tggccaaatt ttagttattt tcaaatgtag
aataaatgtt ggctgtagtc aacctgttgt 20880 gcctatcaag tactagatct
tatttattct atttttttgt gcccactaac catcctctct 20940 cccactaccc
ttcccggcct ctggtaacca tcattctgct ctgtctccat gagttcagtt 21000
gttgtaattt ttagctctca caaataattg agaacatgtg aagtttctcc ttttgtgcct
21060 ggcttatttc acttaacata atgacctcca gttccatcca tgttgttgca
aatgacagga 21120 tctcattctt tttctgtgtg tataaataca ttttctttat
cctttcattc atctgttgat 21180 ggacatttag gttgcttcca aatcttagct
attaagaata gtgctgcata caaaaattag 21240 ccaggcatgg tggtgcacac
cgtaatccca gctactcagg aggctgaggc aggagaattg 21300
cttgaacctg ggaggcggag gttgcagtga gccaagattg caccatcgca ctccagcctg
21360 ggcgacaaga gcccaactcc gtctcaaaca aacaaaaaaa ggaatagtgc
tgcagtaaat 21420 gtaggagtac agctatctct tcaatatact gatttccttt
ttttggaggg gtatatacct 21480 agtagtgaga ttgctggatc atatggtagc
tccattttta ggttttttga ggagccttcc 21540 aactgttttc cttagtgatt
gtactaattt acattcccac caacagtgta tgagtgttcc 21600 cttttctcca
catccttgcc tatcttttgg ataaaagctg tttttaactg gggtgagatg 21660
atatttcact gtagttttga tttgcatttc cccgatgatc agtgatggtt gagcattttt
21720 tcatatacct attggtcact ttgagaaatg tctattcaga tcttttgccc
gttttttaaa 21780 aatcagatta tgagattctt ttcttacaga attgtttgag
ccccttatac atttttgtta 21840 ttaatccctt gtcagatgga tagtttgcag
atattttctc ctattctgtg ggttgtctct 21900 tcactttgtt gtttgctttg
ctgtgcagct ttaaacttga tgtgatctca tttgtccatt 21960 ctcactttgg
ctttggctgc ctgtgcttgt ggagtattat caagaaatct ttgcccagtc 22020
cagtgtcctg gagatcacat actattttta taaataaaat tttattggaa cacagtcaaa
22080 cccattcatt tacatacagt ctgcgactgt tttttttttt cctttttctt
tctttttttt 22140 tttttttaag acaggctatt actctgttgc tgaggatgga
gtgtggtggc acgatctcag 22200 ctcactgcaa cctctgccct ccgggtttaa
gcgattcttc tgcctcagcc tcctgagtag 22260 cttggattgc aggcgcctgc
caccacgcct ggctaatttt tgtattttta gtagagatga 22320 ggtttcgaca
tgttggccag gctggtcttg aactcccacc tcaggtgatc catccgcctc 22380
ttccttccaa agtgttggga ttacaggtgt gagccaccac acctggcctc taaattgatt
22440 tttacttaca atgagcacat ttttgttaaa tttctcgcta ttggcaggag
aagaataact 22500 gaagaaaggg gagcaattct gatccttcta aaggttcttc
ttgcaacatg tcagaaagta 22560 tatttagcat aatgtttctt cttaaaggga
agaccttccc taccttcctt attacccaca 22620 ttcccattct ctgttgttat
tactgagcga tagcattgga taatagaagc attagtttct 22680 aagtcaaaca
ggaactcagt tgcctcatat gtaaagtgat aatattatct aattcacagt 22740
gttgggatta aacaggagta catataggct gtaaaaatgg tagctgctgt ttatttttcc
22800 agttgcctgg aattgccttt tcatttgatg cattccagcg gttctcttgc
tgcccactgc 22860 aaaaaattga taccacatga tttgagaaca agccttggaa
aggatagaat aacttgttat 22920 acattttcat aggttgggat tttttttctt
tatagaatct ttctagatct acttcgtggc 22980 aattaaaaat tacttattaa
ttttcccaat ctcctatcct agataatata tccatctgaa 23040 agagaattat
aagtcagtta ttttggggaa gcagcatagc atagtgagta aaaacatagg 23100
ctttcaagtc tgatctctta ggttcagctt cagctttgcc atttacttac tgactgtaat
23160 cttagacaag atgtttaacc tctgcatatc agttttctga tagggctgtt
atgagggatt 23220 aaatgagata atatatgtaa agtgcccaat gtagtgccct
gtgacatatt aagtaccata 23280 taaatatttg gttattaatg gtcatatgca
tgtcatacaa atctgaatat gtaaaataaa 23340 tcagattgta gtatgaatgg
atgttcaaaa aggtaaatgt agaaatttta ttaagactga 23400 aatatagcat
gtgattttta ttttggtttt tattctttag gtattacatg aaacctttcc 23460
taaacataca tttctgatga acggcttaat tcaaggagta aaggtaggat cagtcataca
23520 tatatatgtg tatatataca tacatacaca tacacgcaca cggatgaaca
tacataaata 23580 catatatata actatgcgaa tatatgtttg tttactgatt
aataacttaa tttttataat 23640 tagatggagt atattttgag agataactta
atactttcta gacttgagtt ttaaatatga 23700 tctaactaca atatagccaa
tcatgcataa taataaacca catcataaca gattccctgt 23760 ttttatgttg
gcattttaat tccagagatc tcaatgattt tgtaagacta cagattgaag 23820
aggaaaaaac tatactaaaa aacccccatc aatataaaac tgtatcagta gggtaaagag
23880 ttggttatta tatgaattct ttgctctttc tttttcgagt tttttttttt
tttttttttt 23940 ttttttgaga cagagtcttg cactgtcacc caggctggag
tgcaagtggc atgatctcag 24000 ctcactgctg agaacctctg cctcccaggt
tcaagcgatt cttctgcctc agcctcctaa 24060 gtagctggga ccacagacat
gtgccaccac acccggctaa ttttttgtat ttttagtaga 24120 gacagggttt
tgccatgttg gccaggctgg tctcgaactc ctgacctaag tgatctgccc 24180
tcgacctccc aaagtgttga gattattggt gcaagtactg tgcccagctc aaattcttta
24240 ctcttgattc agtttgacaa acaagttttc gaaataggta attagcctgt
tttatatata 24300 tataaatata tgttttatgt tttatatata tatatacaca
cacacataca tatacacaca 24360 catacacaaa caggtaatta gcatatggaa
ttgctattgt ggatttattg tgattgagaa 24420 tttattagag cagttcatat
ttaataccta cctggagccc cacagatgat tctaaactat 24480 cttgggaaat
tttaaattta tatatagata agcaattgtt tatttaaaag tttgtgatat 24540
atttacttta gaaacaaagt tgttgaaaat ttttctatag gagtaaaatg atttattttt
24600 ggttcatgct catagatgtg tggtattcat ttttttcatt taattttttt
agggtttgtt 24660 gtcattcctt agtgccccgc ttattggtgc tctttctgat
gtttggggcc gaaaatcctt 24720 cttgctgcta acggtgtttt tcacatgtgc
cccaattcct ttaatgaaga tcagcccatg 24780 gtatgtgcac atttagatta
tagcaactaa atatcacttt cagctattgt tttcttaatg 24840 ttcctttatt
tctttcactt gtgccatctt ggttatgagg ttttaatttt atttttctaa 24900
tacatttatt ctttcacaca gataagaagg cctctaaaaa tacagtaggt aatagttcat
24960 aaagatttta gaaatagttg acactgttgg aggcatctag acttctggct
aacttaattt 25020 tggattccag aacccaaatt tcaaaacaat attttgggga
ctggatagga ttgctaactt 25080 tttttcttgt atagaatgtt aaaaacagac
acaaaatttg tcattatcta tattagttag 25140 gaataggttt tgctatatat
caaaacccaa aataagagtt gcttaaaaat caaatttctc 25200 ttttcatgtg
aaaaagggtc tgcaagttga gcagtctgga gctggtatgg cagttccagt 25260
ggagcagact ttttctatct tgctgttctt ccatcctcat ctctcacctc actgaacaaa
25320 gtggcttctt gagctctagc catcaagtca tactactgat agcaaggtgg
aaggagttgc 25380 taagaagagc acatcacctt cttttaagga aactttacag
aattcccatc ccacctctgc 25440 ttgcatttct ttggtcagat ttcagggata
tgctgctcct agttacaaga gtctggactc 25500 aaggccacct tgattaaaat
cagtattttt tttttttcca ctcaggaggc aagggaagga 25560 aagctaacaa
aaagggaata attgtcctaa agtcagagcc caatttggtt gtagatttat 25620
agatttattc tgactaatgt tctttttact ccactgagta ttaatgttag ttctacatca
25680 cggatgggct ttatttccat ggtgttatct acaaaggccc aaaggtttat
atggggcagg 25740 atcttcttct tgtagatgag atacaattct aatagaccaa
gcctttgatg aaggccactc 25800 atgcacatga aatcttacca aaaattgaac
atggaatgaa caaagaattt gctgtgttaa 25860 gcagtgtgtt agaaaaattt
tagtagtgat agtcttggtg gaatgatatt ttgaaagctc 25920 attatgatta
tatgtgattt tcagaaacta aacatcagta ttacaataga aacttcttat 25980
tcccagctat tttggaatta tttatagcaa aatatagttt actctttaaa tattttgttc
26040 actgtttata gtaactgtct attctcagtt ttatgaacac tgaatcctgc
catataggtt 26100 ttttgtgtgt aaaactgagt tatttgtttt gccagcattt
gaaaagctaa agataactta 26160 tggaaaacat ttagttacta tatagaggct
caaaataaat atgaagaaac ttgttcctca 26220 gtcttgttta ctggattttg
ttttttatct agtgttgtgg tgaaaaacag taatggatgg 26280 attataatag
actttagttt gttgctgttt ttggcagaaa aagcaaaatc acttaacagt 26340
tcaacagttg gtcaaaagat ttgcctgaat acatgatcta attttaagta ttcctgtata
26400 gtagctgagc tgctattgaa gggctccttc tagccctatg ttttcataat
atctgtggct 26460 tatatttatg gaatagttaa tccatgaact atcctagtaa
gctgttgact gaaatgagct 26520 gctcttacgc ttaattaact tataaaaatg
aaagaagatt aaaacaatgg taattgctct 26580 aaccatttct tgttatcttt
cattcctagg tggtactttg ctgttatctc tgtttctggg 26640 gtttttgcag
tgactttttc tgtggtattt gcatacgtag cagatataac ccaagagcat 26700
gaaagaagta tggcttatgg actggtatgt atgtttattc tatacctttt gtatctgctg
26760 agaaatgcct tgtttttaag ataaatatta ttataaggag tgcaaacctt
tgcattacaa 26820 gatttttgcg taaaatatat tttgtaataa aatcattcat
tagactacat ttaaaatttt 26880 tttgcggtat gaggctatgt aagttttgat
tcttttcatt tagtagatat tcataagtca 26940 catgtcagaa ttgaaattat
agtatatttt accttgtaga gttcttttta acagaatcct 27000 aaaaataaga
attatttagt atgtcaagag ttaaaaaaaa tcactactca tttaatgtct 27060
aatctaaaat acaacaggct aacatctagc tcagggatca gcaaaccttt tttgtggctt
27120 tgtgggccac gtacagtctc tgtctcattc ttttgttttt gcatgtgtat
ttatgtttat 27180 aaactcttta aaaatgtaag aaacagccag atttgagcca
tagtggtagg tcgccaactc 27240 ctggacactg ttttggtaaa ctaaattatg
gcagtataat gtgtcatcta tcaaatctag 27300 gaattaaagg aaaaaagcct
agtaatagaa tgactactat aggcacaata atagatcact 27360 actgaatagc
cagaaatagg acagtgatgc atttcggtaa atgtgagaca aataccttgt 27420
gataaataag gactgaatat tgtgttgggc tgaattagtt ttaaaaggga ctgatttctg
27480 attcaaagga cgttatagtg aagaatcata agatttttgg ggaggaaaca
cctatagaga 27540 gaaagttaga aaaagaacta ataatttctg gcctgttcag
tggctcacac ctgtaatctc 27600 agcactttgg gaggttgagg caggcggatc
acttgagatc aggagttcac gaccagcctg 27660 gccaacatgg tgaaaccttg
tctctattta aaaaaaaaaa aaaaaaaaaa gtgaaaagaa 27720 aaagaactaa
tgatttcagt tgtaaacttg gaacattaaa tgatacaagg ctgatgatag 27780
ccaggatatt taaaaaatag tctaattaag ctatagttta cataccataa aatttatcct
27840 ttttatgagt atagttcagt gaattttagt aaatttatac tgttatgcaa
acaccaccat 27900 aacccaattt ggggttggtc ggttggttgg ttggttcgtt
ggtttggttt ttttgacgta 27960 atttattttc ccatagccaa agttttgaaa
ttaacaattt tcaatctgga ggttctgtgt 28020 attaagccat gttctggcaa
aaaacaaaac aaaacaaaac aaaacaaaac aaaacaaaaa 28080 acactgaaat
cttctagaaa taatatggat gcagaaaaaa ggtggggaag tggccaggca 28140
cagtggcatg tgcctgtaat accaccagtt tgggaggcca aggcaggggg attgcttgag
28200 gccaggagtt tgaggctgca gctatgatca tgccactaca ctccagtcta
gggtacagag 28260 tgagaccctg tctcttaaaa aaaaaagttg gaggggccag
gtgcagtggc ttataatccc 28320 agcactttgg gaggctgagg caggaggatt
gtttgagccc aggagtttga gactagcctg 28380 ggcaacatag tgagacccca
tctatacagg aactttaaaa attagccagg tgtggtggtg 28440 tgtgcctgta
gtcccagcta cctgggaggc ttaggtgaga ggatcacttg ggcctgagag 28500
gttgaggctg cagtgagccg tgatcgcacc actgcgctcc aacatgagcc acagagcgag
28560 acctgtctcc aaaaaagggg gttggggggt gcggggtgac ccctgtgatc
ttttttctga 28620 gcagaaagaa atggctacca agtggagaga actgaggaga
agggaaatga catgaaacaa 28680 ctgtactgac ttgctcactg tgtcacaaat
gtgatctctg taaatgccct caaatgtctt 28740 cagtgaccct catagtgaga
accattttcc ctttccccac acttgtgcca gagccctgct 28800 gagatctggg
tccctctgaa accacaccta gggctgcaat aacaaaataa ccactacatt 28860
tgaaaatata tatttatatg tatgtgtgtg tgtgtatgta tgtgtgtgta tatatatata
28920 gtttgttttt tgttgagacg gagtctcgct ctgtcaccca ggctggagtg
cagaggtgtg 28980 atcttggctt actgcaacct ccgcctcctg ggttcaaacg
attctgctgc ctcagcctcc 29040 ccagtagcta tgcccaccac catgcccagc
taatttttgt atttttagta gagacggggt 29100 ttcaccatat tggccagtct
tgtcttgaac tcctgacctt tggtccgcct gcctcggcct 29160 cccaaagtgt
tgggattata ggcgtgagcc atggcgcctg gcccccatgt gaatatatta 29220
aataccattt aaaaaaccac cacaacccag ttatagaaca tttccatcag cccaaaatgt
29280 tccctcagcc ctgtttgcca tctgtcccca tgctccacct gtgaccccaa
gcaaccaaca 29340 atttagcttc tgtcaccatg gttttgcctt ttctagaaac
ttcatagaaa ttaaataata 29400 caaaacatct tttgtgtcta acttctttca
cttggcataa tcttttgaga ttgatccatg 29460 ttgatactat agatcaatag
gttctatttt tgtctctttt cctttttttt ttttttgaga 29520 cagggtcctg
ctctatcccc caggctggag tgcagtggca tgatcatggc tcactgaagc 29580
cttggcttcc tgggctcaag cgatccttct gcctcagcct ccaaagcagt tgggaccaca
29640 ggcatgatcc accatgccca gctaattttt ttctttttga gacagggtct
cactctattg 29700 cccaggctgg agtgcagtgg tgccgttaca gctcactgca
gcctctgtct cccctctacc 29760 tccctgcctc aagtgatcct tccacctcag
cctcccgagt agctgggact actaattttt 29820 gtatgttttg tagtgatgga
gtttcaccat gttgcccagg atggtctcaa actcttaaac 29880 tcaagtgatc
tgcctgtctc agcctcccaa agtgctggaa ttacaggcat gagacactgc 29940
acctggccag tagttttttt tgattgctgt gtagtgtatt cttatccatc agttgatgga
30000 catttgattg atagctagat gtttgaaatt actagaattt tatgtacttg
ttcaaataat 30060 tgacctttga aaattgaatt gcttgcctta agcaatagag
ttgcaagtaa gcattcttgt 30120 gaagtttaag ttctccatcc aaaagtcaaa
aatggcatag aaacagaata aaattccaac 30180 attaatctct atgctttgaa
agaatatggt ccttttcctt tccttccctt cccctttcct 30240 ttcctttgcc
cttctcttcc ccctcccctc ccctcccctt tccacttttc actttcactt 30300
tcccctttcc ttttcgcttt cacctttctc ctttcctttc cttttctctt ttcccttccc
30360 ttcccttccc ttcccctttt ccctttcctt tcccctcccc ttttcccttt
cccttctttt 30420 ttctttttct ttccttttcc tttcccttcc cctttcccct
tttccttaag ccttttccct 30480 aagccttttc ccttttttaa ccctttcctt
ccccttttct cttccccttt ccccttttcc 30540 tttctcctcc tctcctttcc
tttcctcttc tcttctctcc tctcctcttc tttccccttt 30600 ctccattcct
tttccctttg ctttcctttc ctctttcctt tccagacagg gtgttgccca 30660
gactggactc actcttggga tcaagtgatc tcccacctca gcctcctgag tagctgggac
30720 tataggcagg tgccacctca cctgactaag agtgctattt ttatgaagtg
tttcctgctg 30780 tcacatctgc taatttgtag gctgttgtcc agtaggctag
aaatgtctgc ggttaacagg 30840 tttgctctac tcgtgtcctt ttcaacttta
atcttcatct tcaccaggct taaaaaaata 30900 gacttcctca gagttttaga
gatgttctta atttatctgt gatttcattc ttcctaaccc 30960 tgccaactaa
aaagattacc aagctcagtt ttgttccagg gcttaacata ttattcatga 31020
gaacaggaac ctccaagtct ttaagcttta tttcagctag cccttcagta tgtatcaaga
31080 taaacgttca tttaatttta atattggaaa agtcacagtg aaattggatt
tccttagagc 31140 agtggatttt agactccttt cacagagagc acttaagggt
ttatggagat gcccttaacc 31200 aagcttgtcc aacccatggt ccacaggctg
cacacatggc ccaacagaaa ttcataaagt 31260 ttcttaaaac attatgcagt
ttttttttct ttaagctcat cagctattgt tagtgtattt 31320 tatgtgtggc
ccaagaccgt tcttccagcg tggcccaggg aagccaaaag attagacacc 31380
cctcccctaa ggaccagcat gactggcagt caaggagggg tgtttgtaca gtgcccaggc
31440 tctcaaccct tcctcaacta aaagagttaa aaaatttaaa taggccgggc
atggtggctc 31500 acgcctgtaa tcccagcact ttgggaggcc gaggcgggcg
gatcacgagg tcaggagatc 31560 gagaccatct tggctaacac gggggaaacc
ccatctctac taaaaataca aaaaattagc 31620 cgggcgaggt ggcgggcgcc
tgtagtccca gctattcggg aggctgaggc aggagaatgg 31680 cgtaaacccc
gggggcggag cctgcagtga gccgagatcg cgccactgca ctccagcctg 31740
ggcgacagag cgagactccg tctcaaaaaa aaaaaaaaaa aaaaaaaaaa tttaaataga
31800 ggcagggtct tgctgtgttg cccaggctgg tcacaaactt ctggcttcac
gcagtcctcc 31860 caccttggcc tccccaagtg ctgagattac aggcatgaac
catcacaccc agtcttctta 31920 aaaaaatctc ttttacctat gaatttgcca
gtaggattta ttggaacaga gggctccaag 31980 gcttagaaag tttgaagaca
gtgtcctgag aggctatcat ttattttatt ttatttttga 32040 gatgcggtct
cactctgtca ccctggctgg agtgcagtgg tgctgtcatg gctcactgca 32100
acctccgcct ttctggctca aaggaattct gccacctcag cctctgaagt agctgagact
32160 acaggtgcac accagcatgc ccagctaatt tttctttttt cttttttgat
acagacaggg 32220 tttctccatg ttgtccaggc tgtttttaag gcaagaatct
aattctttac ttttcctgcc 32280 aaaggagaga gtataagaaa agtggggcca
ggcttggtgt ctcatacctg tactcccagc 32340 ccttcgggag gctgaggtgg
gaggatcgct tgagctcagg agttcgagac tagcctaggc 32400 aacatagcgt
gacttccacc tctataaaaa ataaacaaaa ttagctgggc gtggtggtgt 32460
gtgcctgtag ccccatcagg agatcttcag gcaggaagat ctacttgagc ctgagaggtc
32520 aagactacag tgagccgtga tggcaccact gcactccagc ctgggcgaca
gagcaagacc 32580 cagttccccc actctcgccc ccacaagaaa aaaagataaa
tggcacaggt aggaagagaa 32640 aagggagggt gtgcaacaga aggcctgaca
taaatcaaga ttatgaaagg agttatgtgg 32700 tgttgaggaa aaaagtagcc
tgactaatct ctgtctatcc ttaatttatt gcaggtttca 32760 gcaacatttg
ctgcaagttt agtcaccagt cctgcaattg gagcttatct tggacgagta 32820
tatggggaca gcttggtggt ggtcttagct acagcaatag ctttgctaga tatttgtttt
32880 atccttgttg ctgtgccaga gtcgttgcct gagaaaatgc ggccagcatc
ctggggagca 32940 cccatttcct gggaacaagc tgaccctttt gcggtaagtt
tatacttttt ccttctcctt 33000 gataaaaaag tgcatgattc agtgcagcat
taatattttg ttgtggatat ttctttaggg 33060 aaaacatctt gggtttttct
tttaacattt tgaaatactt ttcagaatag tttggggaat 33120 atgaaataaa
taaaaaggac aactagttgt ccatgagtac actgccaaaa ggaatctctg 33180
catattctta agaatagttc agtggttttg atagaaaacc ttatatcaat cagtcttttt
33240 cttgttctag tccttaaaaa aagtcggcca agattccata gtgctgctga
tctgcattac 33300 agtgtttctc tcctacctac cggaggcagg ccaatattcc
agcttttttt tatacctcag 33360 acaggtaaaa tcctcttcca ctaaggtgga
cttttctttc attgtctagt gctttaataa 33420 aaatatttaa tcttgagaga
actgtaatag aagtggcctt taaaaatgaa tatcattgga 33480 cttggtatag
tggctcacgc ctgtaatctc agcactttgg taggccaagg tgggtggatc 33540
agctgaggtc aggagatcaa gaccagcctg gccaacatgg caaaatccta tgcttactaa
33600 aaatacaaca actagccagg cgtagtggcg ggcacctgta atcccagcta
cttgggaggc 33660 tgaggcagga gaatcacttg aacccaggag gcggaggctg
cagtgagcca agattgcgcc 33720 attcactcca gcctgggtaa caagagcgaa
actccgtctc aaaattaaat aaataaataa 33780 ataaataaaa agaatattat
ttggtctact agactttacc tcctattctg tgtggctgat 33840 gttccttatg
catttctaat gggggttatt tggtatatta agatatttgg cttagggaga 33900
aagatagttt tccctgtcca tataggtggt ttgagtttgt tggctataga attgatggga
33960 tgatttaacc ccttcacctg ctccagcttc tttgtgattt agagcatatg
taagtagagc 34020 agctagccaa aatgagagca aaaacaagta ttttcctcct
tgacactagt ctcactagac 34080 ggagatcaag cctttaacca atacatgtaa
aatgcacaaa atactgcaat atttatttgt 34140 aaaatgattc tgagttcttg
ataagtatct ccaatttagt atatccacat tgagggaccc 34200 accatggata
agtaggcatt tttagtatgt taagatatgt tgtatttcct ctgaggaatt 34260
ctttgtttat aaatgaatta catttatttt tttctggccc attaaatgtt aatatacaag
34320 tagctgcagt ggttttctat ctggtataca tttgtattca ttaatgttac
cttttctgga 34380 aacccttcta gataatgaaa ttttcaccag aaagtgttgc
agcgtttata gcagtccttg 34440 gcattctttc cattattgca caggtgagtt
tcttttttta gttagagtga tgtcagtgac 34500 cctggctggc catccaaact
ggggcctcat ctagtgatgg tatcttggtg gaatcaacaa 34560 agtcaggagt
ctgaggttga taggttcaga aattcaattt gtttgtgtag ctagtgttga 34620
tcagattttt gggactgaca catttaatat aggatatata aacgtaaaag ctagtttatt
34680 gatgtatact aggatatatg tctggatgaa gttagaagtt tcatgtcttg
tagtccttgt 34740 cctatttatt cactcattca acaaatattt attgaatacc
taccgtgtgt caggcactgg 34800 ggatacagca gtgaacttaa ctaaattctt
gcttttgtag agtttacatt ctggtgggat 34860 aagacagaaa ataaaaacac
caatgtaaac atatcagatg tattgagaac tacagagaaa 34920 aagctaaggg
tcatatggag agtgacttgg gagaatggtc ttaagggcac agggggcatg 34980
gttgagaaga ccttgctaat gcaaggtgac atttcagcag agacgcaaag gtatgaggaa
35040 caagctgtag gattatctgg aagaagagaa ttttaaacag tacaaacaaa
attctcagga 35100 gagactgtag ctggcttgtg taagaaacaa cagggggcca
gtgcggctcc agttgagtga 35160 acagttgaga gcatcttaga aactgaagtc
caagaggtag tgagggacca gatcgtgcgg 35220 ggcttacagg tcctcataag
acttgagtaa gataggaagt cattggtggg ttttgagcag 35280 cagaatgaca
tgaaagtgtg tatcttggca gcccagttgg taaacagttg ttgtgtgatg 35340
aataagatat taatcaacac aggaatttgg attttctgag gagatatttc atcctggctt
35400 ccaaactgtt tctgtttaac aataagaata ctatcttttt tccagtgacc
accataattc 35460 tctcacatca cagaacattg tcctccttcc tgtgaaaaag
ccccaccccc tttcttgcta 35520 tttggctttc tgtttctaag acactatgaa
gacaatctag tctaagttaa tactttttct 35580 caccttagat gtaatctact
agattacaac ttagttttat tctagggtat ttttaattga 35640 ctcttggatg
gttcaccatt tctcgagtag gattccttct gcaggtctca tgattcattc 35700
tgttttggtg agtttagcaa caaatttcaa atttaaatcc tatatgcctc cccaagcctc
35760 tgcacataca tatacttggt gttgagtatt agtactattt ctagcttcag
gtttgtccta 35820 aaaatcatca gtctggaaaa acaatgcatt taaatattca
ttcctagcca tgagaaaagt 35880 gctttttaac tttggaggaa aatatactgt
agcctttata taaaaatggc tttaaaaaaa 35940 gtttttgagg ccaggtgcgg
tggttcatgt ctgtattccc agcactttgg gtggccaagg 36000 tcagggaccg
cttgagccca ggagttcaag accagctcaa gcaacttggc aaaaccccat 36060
ctctaccaaa aaaaaaaaaa aaaaaaaaaa aaagaaagaa agcccggtgt ggtggtgtgt
36120 gcctgtagtc ccagctactc aggaagctga gatgggagga ttgcttgatc
ctgggaggtc 36180 gagggtgcag tgagccacag ttgtcccatg gtactccagt
atgggcaaca gaatgagacc 36240 ctgtctcaaa aaaaaagtgt aaggaaaata
cacagttagt atgtgtagaa cttgatgaat 36300 tatcaaagat taacccaacc
ttgcaataga tgtgatcaac ctgggcatga gtatcttttt 36360
catacattgc caacattaga tttgctaaca ttttgtttaa gatttagatg aagagagcag
36420 actaatactg taatgacaca taaaagattg atagctataa ggtcttaagt
tctgtttctt 36480 acttaaatga ccatgggagc tgtatgcatc taataaatgt
agtcagtgac actgcagacc 36540 cagtgatgag tggagggtgc ttttgagggt
atttttcctc tgtttagcag atggcatctg 36600 gcactaggtt acaagatgaa
aaacagtctc tgagagtgca gaatctggca gggcagacag 36660 gtaaaggaga
ggaatgtagt tggatttgta ttggaaagat cagtgcagca gcagagccct 36720
gaaggcagta agaccgcaag gtgcaagcaa ccctccaaac accattgctg acacagcatg
36780 acacacacag tccatgtagg aacaaggtcc ttaagtgacc atttaggttt
tggtgcttat 36840 gtagaagtaa gaattaacac tttatatcat atatgagcta
ctacattatt acatgtatag 36900 cctcaaaggt agaagaatga tcttgtattc
tcatttatgc agaaatatac aattgagaat 36960 gacttgtccc ctgttgacct
tccataccac tgaaagacca gtgtatttct ccctcctctc 37020 cagcagcacg
gagctgctaa tagctctcca ttaatgcatg tttgctttat ttcttaccca 37080
cgtgcttttg ttcctgctat tctttctgcc tccccttcct ccaccctaag tagccctttt
37140 ctgggtcccc atgctcatgt gcgcatatct ccatcattgt acagaataca
gtgtagtaga 37200 gattttatct ctgtttattg ccttagtttg tgagctctag
cggacctctg agtagatgat 37260 gaggtcagga ttatatcata ttcatttttg
tcaccctagc accctgaact gccaggaggt 37320 gctaaactaa aggtcattgg
tttttttcca taatgttaaa aaaaaaaaaa acttaaaaaa 37380 ttagtagtaa
gcactttaaa attgggaagt gttacgtgaa attatagtta tgtagcttct 37440
cccccaaaat gattagatct ggtaaccggg tgtgggccaa ccttccagcg agagccaagt
37500 agttgctgtc ccctttggaa ccttttcttt ttggtttatc atcagcccca
ttacttcctg 37560 ggcaccggta cgtataagag ttcctaacac ttgcactaag
taagtgttta catgagaaca 37620 tcaatatagt tctacacatt tcttttttct
cagtgttttc ctatccagcc ctctctgtgg 37680 gggtgactcc cacacttact
cttccagtcc agtccctgag ctcctatatg acacattggc 37740 tgggtatctc
agccttaaca tggccaaaat taaaatctgg gttccatccc ttgcccgcca 37800
cccctatgct cctcatctca ttcagtggct tcaccaccgc caggttttgg gggccagaag
37860 ccttagcgac attcatgaat cctttctccc taaccttaca ttcagcccat
caaatgatac 37920 ttcctatcac ctctctctcc aaaatatatc ttgaatcaga
gcgtttctga tattctccat 37980 tagtaggaac ccaatctgag ccgtggccat
atcttccatc tggtctctct gcttccatct 38040 tgcctcacta tagttcattc
tgcacttggc agagtaattt ttgtaaaatg gaaatttaat 38100 cgcatcttac
ctataactca ctttcctttg caaccagaat aaaatctaga ctccttatta 38160
tgtcattttc ctccactctc cacatggttg agtatgttct gtttcagtcc agggcctttg
38220 cacttgctgt cagccttgct tggggtgttc tctttcccca gatctttgca
taactaggtc 38280 tctcccctta gtgagctctc acttcaaaag gccttccctg
gatcctggtt taagcagcat 38340 ctccatcaca ctgccctgtt ttattttgtt
catagcagct acaacctgga atatcttgtt 38400 aaataagcag gctcatatgc
atctttcctc catgagaagg tagtccgtgt gttgatggat 38460 actttgactt
actcacccat gcgtcttcag gccaagaata agagttggtc ttattaggaa 38520
tttggcaaat atttgttgac agactaacca aagctgatgt tagtgttagc ttagctgttc
38580 atcagctatg ccatcttgct taagtcattt aacctttggg actcagtgct
gtcatcttca 38640 aaatgagagt taaattaagg gacaccaaaa attttttccg
ttcaagaaca cttatatatt 38700 aagtattttg ttccattatt attaatatta
ttgagaatat tataacattt agaattatgc 38760 atgctttcca taaacactta
ttaagaactt actgggtgct ggggatataa atgtaaataa 38820 gagaaaagtt
cctgccttca agaagaaaat cagtgttccc agttacagtg ttgtaagtat 38880
cggtgtcttt tagggctttg ggtcacaaga taggctgtag gggaaggagt ccaagaggag
38940 gttctcacag cagtgggcct gctgcagtaa ttctgcacat aggacgttac
cccaggaaag 39000 ggggattggt gtatctcatt gtttccaatt ttaatgactc
atctcatggc cttaagaaaa 39060 tatattcttg gccgggcacg gtggcccaca
cctataacct tagcactttg ggaggccaag 39120 gtgggtgaat cacctgaggt
caggagttcg agaccagcct ggccaacatg gtgaaacctc 39180 atctctacta
aaaatgcaaa aaaaatttag ctgggcatgg tggcacgtgc ctgtaatccc 39240
agctactcgg gaggctgagg caggagaatc acttgaacct gggaggtgga ggttgcagtg
39300 agccagcatt gcgccacagc actccagcct gggcaacaag agcgaaactc
catctcgggg 39360 ggaaaaagaa aggctgggca cgtggtggct cacgcctgag
ataccagcac tttgggaggc 39420 cgaggcagct ggatcacaag gtcagaagtt
cgaaaccagc ctggccaata tggtggaacc 39480 ctgtctttac taaaaataca
aaaattagca ggcatggtgg tgggcacctg agtcccagct 39540 actcgggagg
ctgaggcaga aaaatcgctt gaaccccgga ggcagaggtg gcagtgagcc 39600
aagattgtga cactgcactc tagccttggc aacagagcga gactccgtct caaaagaaaa
39660 aaaaacccaa aagaaaaaga aaatatattc tccagttaat cttatctata
aaaaggaaat 39720 gaggctaata atgcattcta agcctttttt attgaattgg
gatttattct ttgagaacag 39780 ctttccacaa aggggaagat agtcatttct
gcagataagt acttactggc tagatgggtt 39840 ggttgaaggg ctatgagatg
accgcatttt ataagtactt tctggtaata ttaatgatct 39900 ctgcttgaga
agtgtcagct ttcttagact agcattcctg aaagaacacg tgctccaggg 39960
tacatggctg gcccatgcca tcctgttccc actgagctgg gagttgatgc tcagccttct
40020 tcactgtcct gtctcttggc tgaagtgcca gggatttcat cattaagtga
aatctatttt 40080 ttaacagcat ttcttccttg taatgcttat catcatctca
atgaatgatg agaacaaatg 40140 ttttctgctc tgtgagttcc tagagccata
taaagaatca cagcttttta gatgaaagtg 40200 ctaccttccg ggatgttctt
aaaagtagtt tcccagaagt tcttcaactt tgcattatag 40260 ttccctgttc
ttctcagaca gttggaggcc acagagcttt gggtatactt acagtttcct 40320
ttttcataat taattgaaag ccagtctctg atatagtcca caaataaaat catttttaat
40380 tatttctaac cctaattaga atcctaatca tttctaatct ttctgattat
tttttataat 40440 attggccacc agttcccacc cacaagtcat gggtgacttg
agatggtctc tgtcacccag 40500 gctggagtgc agtggtgtga tcatggctta
ctgcagcctc gacctcctgg gctcgagtga 40560 tcctctggac tcagcctcct
gagtagctgg gaccacaggt gtgtgccacc agcctggcta 40620 atttttcaat
tttttgtaga gatgtggtct ctttatgttg tccaggctgg tctcaaactc 40680
ctgggttcaa gcagtccttc catctcagtt ccccaaagtg ctgggattac agatatgagt
40740 cactgtgcct ggcctaaatg tttctttcag ttgaagtttt tctcagctaa
ctgctggctc 40800 tgggcaagtt tccttttctg gtttggttgc cgaagaatat
aattctacat ggaactcagt 40860 cttatactca cgtgatttaa gtgaaagtct
tagacaagaa agctgtgagt tctaattgct 40920 caaaaatcct tgaatgaatc
atttgctttt cactggcata tttgtgatta aattcttaag 40980 tggccatctc
aatttaaaga attcaaaact tatattttat gagttttaaa gtgtcagccc 41040
atcataaaat agtgatttcc tgaattattt ttacttgtct atggacttac tagctatctt
41100 atgtagtata ttaaaaacgt tagttagaat agcaaaaaaa aattttctaa
tgttcccaaa 41160 tcactgctga actttgttga ctttgaaaga aaaaggaggc
acaagaaaac ccacccactg 41220 ataatattgt ttattaaccg ctgattattg
ccaggcacaa ttctaagaac tttatgtaaa 41280 tatatctcat ttaattccca
tgacaaggtt ttgaaatagg tgctgttatc cccatttgca 41340 aagagacaaa
agtgaggctc aaagtgaagt gacttgctga gagccacaca aagccaagat 41400
tatgatccag gctgtttttc taaagtctgc tgtatagtat actgcattta tcccaaatca
41460 agcttattaa tttactgttt ataaaaggca tcatggtttc aacaacagat
taacttaggt 41520 aaataatata tgggtaatca ttgttctgtt agtttttctt
tagttgtgga aataagcatt 41580 ttagactaac ttggacctaa acaagcttta
aggctattat gtaatgggga tctccaaatc 41640 attagttaga acttttgacc
cttccatttt caactactga tttaagtggt cctcagtaga 41700 aatgtactga
ataggaagtt ttatctttca gttttctaac tctcagtctg gatctatgtc 41760
agcagaggga cttttcatct gcttatgtga cctggactag tgatctcaga catattcagg
41820 gcaattattg ctgaaaatca gccaaattgt agaaaagtgc caatagtcct
tttatagtgt 41880 agattgaaag aagtcacttt ttaaaacttt attctgataa
atcttttttt ttttttttca 41940 gaccatagtc ttgagtttac ttatgaggtc
aattggaaat aagaacacca ttttactggg 42000 tctaggattt caaatattac
agttggcatg gtatggcttt ggttcagaac cttggtaagt 42060 ataaatattt
taatgttaat atttttaatt ttggtgttag cccttgtgtt tttatttgct 42120
tctcaactga ggggtagact gtaatctgtc tcatactatg ctttttatct ttcaaaatgt
42180 gtctaatata agtctgccac ttgtatattt atatgttctc ctagaatggc
ttgaggatta 42240 aaaaggtgac cttttatagc taaatgacag gctgaatttt
tgaatgagat tatacagctt 42300 ttgaatcttt aaggagcatt taatctaaat
cagtccgtta ctaggaaaaa gtatgtaatc 42360 ccatagcaac aaggccctga
aagttattta cattttttgt ttttctggtc aggaaaaaga 42420 aagttgtata
accagtgatc attactgata gcaaaccaga agtgaaaaca atccagttat 42480
tttggtgcca gcttcatgct gtgtctcagc ttttctgacc agtcgggttt cctgcagggg
42540 acttgagtag tgacgcttgt tgtcaggctg cccacgtaga tagtattatt
gtgctcaggc 42600 attatggcac tgaactccat ggtttgcact aatatttcaa
acaactgact gcctcgtctc 42660 tgtttggact tggatataag caagcatcaa
gagggtgatg atttgttctc caaactagcc 42720 tttgcaaaga ggtgctcaca
attgaaatta cctaaaacat ttcttttaaa catcaagcca 42780 ggaacatcca
agttacttgt tctttacaat ttaaggatta gatcaaatca gcgatatctt 42840
cacaaatcca tccataagaa ctttgccaaa gacttgttgg cttcatgtgt ttggaaatat
42900 ttgatgatgt ttcgtcatct atattataca ttatcctcaa tataacctct
caattgcctg 42960 tagaaataat acccagcaca ttttacagtt tggaacatga
tatccctatt ttacattaca 43020 ccctcacagc actcttgtga attaagttgc
tgtctttgta tacagggtca gattgttaag 43080 cgacttgccc atagtcacct
agtaagcaag ttcagttctc cttttctcta cagccatttc 43140 acagtaagaa
ttacttaatt atgtagtttg actttcaggt acagtggaga agaatttact 43200
gtttttgttt tgctgctctc cttataggat gatgtgggct gctggggcag tagcagccat
43260 gtctagcatc acctttcctg ctgtcagtgc acttgtttca cgaactgctg
atgctgatca 43320 acagggtgag ttgataggaa ctagcgataa ttatttaaaa
gtacagaatg ttctaatcct 43380 gtgttctgtc tcctatgtac tgaaacataa
gtatatcttc agggtagaga cttttaaaat 43440 tgcttttgat ataaacagga
aaagcagatt ctagggtatt tatccttagg tagatacata 43500 ttcccttttc
tctcacttag aatatgtggc ttatctgttc tgttcataga aaatttactg 43560
atgaggctgg gcatggtggc tcacacctgt aatcccaaca ctttgagagg ccgaggcagg
43620 cagattgctt gagttcagga gttggagacc agcctgggca acatggggaa
accccatcac 43680 taaaatgcaa aaattagctg ggcagggtgg cgcatgcttg
tagtcccagt tacttgggag 43740 gctgaggttg gaggatcact tgagtctcag
aggcggaggt tgcactgagc caaaatcagg 43800 ccagtgaact ccaacctggg
cgacacagtg agagaccttg agagacctgt ctcaaaaaaa 43860 tttactgatg
aatgttggcc acagaatatt aactaagcat taagtttttg ctgtgttgtg 43920
ctagacacct tgtgggatat attcatagac cttttatgaa tgttgtccca gccacttggg
43980 aagctgaggc aggaggatta cttgagctca agagtttgaa gctagcttag
gcaacacagc 44040 aagactccca tctctaataa aaaaaaaaaa agaaatcata
tagtttcagt catctgaaga 44100 tatgtaacac agcaacatct ttaatgtcat
atgctctctt tttttttttt ggtgggaaca 44160 tttaattctt gggatgctaa
cagatgacaa atacttcttt gaaaaggata tgttttgtct 44220 agtcataagg
ataaaagggg cactgcaaaa cagtggcagt tgtcacttgg ttgataaatg 44280
aggaaggaaa ggcctatggc caaagcaagt tgcattttaa attaaagatc caaaagagag
44340 aaacaaaaat caaatgctgt taaaacagtg ttattggccg ggcgcagtgg
ctcatgcctg 44400 taatctcagt gctttgggag gccaaggctg gtggatcacc
taaggtcagg agttcgagat 44460 cagcctggcc aacatggtga aaccctgtct
ctactaaaaa aatcaaccag gcgtcgtggt 44520 gcacacctgt aatcccagct
actcgggagg ctgaggcagg agaatcactt gaaccctgga 44580 agcggagttt
gcagtgagcc gagatcgtgc cactgcactc cagcctgggc aacaagagtg 44640
aaactccgtc tcaaaaaaaa aagtgtgatt ttggctgggc acagtggctc aatgcctgta
44700 atcacagcac tttggtaggc tgaggcagga ggatcacttg agttgagttc
aacaccaccc 44760 taggcaacaa agtgagaccc catctctaca aaaagtacaa
aaattagcca ggtatttgag 44820 cccaggaagt tgaggctgca gtgagccaag
tttgcgccac tgcactcccg ccagttgacc 44880 cccccacttt atttttgact
aaaaggggtc ttaagtactt gcttggggac agataaattt 44940 taacatttgt
agttgtgaaa ttgtgactga tttttaacca gccatgtttt gaaggctgta 45000
atctagggaa ataaagtagt tttgcccact tgtttctatg tgagacctat atatgggtac
45060 atcagagctc atgtttgcat aggacagctt actacacttt gtagagctga
tagcttctaa 45120 atattaatag tttttaatga cattgctata aattgctagt
gtctgataag aagcttgatt 45180 ttagattaag tgatttcata tttgtactgg
ttctaaggta gggaaaaaaa accaggtagt 45240 ttactaagtg ataatttgtt
taaacaatgt aggtgtcgtt caaggaatga taacaggaat 45300 tcgaggatta
tgcaatggtc tgggaccggc cctctatgga ttcattttct acatattcca 45360
tgtggaactt aaagaactgc caataacagg aacagacttg ggaacaaaca caagccctca
45420 gcaccacttt gaacaggtaa ttctcattca acatgatcaa attgtatggt
tcatttggct 45480 agattaaagg ctactggttt ttggtcatga aagcttttat
gtgagattct atttgagatt 45540 ggataaaatg cttaaaaacc agagtttaag
ggactgtgtt cttctacata ccaccttgtg 45600 aaaattggct gtgcatattt
tttttccact tgagaatgaa aaattttaag tacctagttt 45660 gtcaatggca
tatgtaacaa accatttctc tttactacta gtctcttttg aaacttttct 45720
aatatcacag ttgtgtatgt taactaactt ttcatacaaa aggcaggctt atggtaaata
45780 acctttgttc actgtttgct atatttccct cttttcaact gaaaattaat
gccaaacaat 45840 gctgatcatt ttggccaata ttagcagctc atcagtttcc
tggcttattt agcagagttc 45900 tgtacttatc ttccaaccca ctaagactac
ttttaaataa aagaatgttt gtgggctata 45960 cacaaaactg gcagtgcaag
cttctgctaa gaatgaatgt aattttgggc taaaacaaag 46020 gtctcttttt
cttggtaacc tgtgtttttc tcacttccag tcacttgaaa ttataattac 46080
cttcttgaaa caaagaaatg gtaatttatt ttgctactgt agtaaatact gtatgctacc
46140 tgattttatt ttgttttttg ttgtttctga gacagtctta ctctgtcaca
caggctggaa 46200 tgcagtggca caatcttggc tctctgcaac ctctatctcc
caagttcaag cgattctttt 46260 aacatcagcc tcccgggtag ctgggattac
aggcatatgc caccatgacc ggctaatttt 46320 ttttgtattt ttagtagaga
cgaggtttca ccatgttggc caggctggtc tcgaactcct 46380 gacctcaagt
gatctgcctg cctcagcctc ccaaagtgct gggattacag gcttgagcca 46440
acacgtgcag cctgatttta tttttgagat ctttctataa acgttttccc cttggactaa
46500 caaattaatc atagaatagc tgtgttcaca ttttgtgctg aaagtaatga
tgtaatattt 46560 tcgcataggc tgttttgcca gttgttattc ccagaatttt
atagagaatg tgatagtatc 46620 tcttttctcc taaaaaggga atgcctttta
taattatggc tttaataaag agaagagcaa 46680 ttagcttgta attcataagt
taatactaaa aggtatgtag tttctcctta tgagtaaaag 46740 tatttgtgta
aaaatcctaa ttactttatt cttcctcaga attccatcat ccctggccct 46800
cccttcctat ttggagcctg ttcagtactg ctggctctgc ttgttgcctt gtttattccg
46860 gaacatacca atttaagctt aaggtccagc agttggagaa agcactgtgg
cagtcacagc 46920 catcctcata atacacaagc gccaggagag gccaaagaac
ctttactcca ggacacaaat 46980 gtgtgacgac tgaaatcagg aagatttttc
tatcagcacc caggtcttag ttttcacctc 47040 tagttctgga tgtacattcc
atttccatcc acagtgtact ttaagattgt cttaagaaat 47100 gtatctgcat
gaactccgtg ggaactaaag gaagtgggaa cttagaacca gacagttttc 47160
caaagatgtt acaatttctt ttgaaaaacc ttttgtttat tagcaccaat ttcttgccac
47220 taagctattt gttttattat acatccttta attaaaaact atatatgtaa
cttcttagat 47280 attagcaaat gtctctgcta ccatttcctt aaggtgttga
gctttaactc tatgctgact 47340 cagtgagaca cagtaggtag tatggttgtg
gacctatttg ttttaacatt gtaaaatttt 47400 gagtcagatt ttaatattgt
aaaatcttgg gtcaaataat tcaaagcctt aatgcagatg 47460 cactaaaaca
aagaaatggt aaatgaattg tttgcattta aaaaaaaaaa ctcttaagaa 47520
aactgtacta aatctgaatc atgttttgag cttgtttgca gtacttttaa acattattca
47580 ctactgtttt tgaagtgaga aagtatcagc catttagcat ttaagttggg
gtatttagag 47640 cctgtaatct aaatgctggc tcaaatttat tccccagcta
cttcttatac cactattctt 47700 ttaatgtttg cataatcata agcacctcaa
cacttgaata cataatctaa aaattatata 47760 gtaaagctgg tagccttgaa
aatgtcagtg tgatatctat tatgtagata aatatatata 47820 gtggcctttc
aggactgtca cagtaacact ttatttacag agctaatgtt tgtcctaaat 47880
tttcaggacc ctagaggaga gctttataca attaccgatg tgaatttctc taaagtgtat
47940 atttttgtgt ccagttatat tatttaaaaa agtgttactt tgtaaaaatt
gtatataaag 48000 aactgtatag tttacactgt tttcatcttg tgtgtggtta
ttgcttaatg ctttttaaac 48060 ttggaacact cactatggtt aaataaggtc
ttaaaagaaa tgtaaatatt ctgttaataa 48120 agttaaatat tttaatgatt
ttttttttaa aaaagtcttg atctgtgagt tcctacaggg 48180 tctgttttgg
ctttgttacc atatttttac agtaacaaat caaagcatta ttcattcttt 48240
ctttgcatcc atttcttttc cctcactaaa aaatgctctt caaggaagac aagaggaaag
48300 aaacaaaaat gcagtatgcg ttttgaagta cttgattttc aaagtgtaga
tgctgcataa 48360 tagtttatta acaaagctca aagtttacag aaataacatt
aaatgcaaca ctttttgatt 48420 attaacacat gtacaatttt acactgcaaa
acaattgcaa ctaaaagttt aggaggtaaa 48480 gaattagcac acttggaagt
ctgtatacat ttaatacaaa tttgcaagat atcagaatga 48540 tctctcctga
aaattcaact ttccttgtgt atatatatgc aaagagatac ctatatttta 48600
aaaaagagag ctacctgtat gtcatgcatc ccatccaaaa catgtcacaa tattttatat
48660 atattacata gtatttacaa caaagcccct tccatagtat ttacaataaa
gctccttcca 48720 aaatcaccaa gaggcttctt tccagaatag caagtgcttt
caagttactg taccaagtat 48780 tctcactaat acagtagtgt atctaaatgg
gggaggtggg ggagtatcaa ctgcctaata 48840 ttagttactg aattttcaga
ttagatccct agtttaaaga cacttgcaat tgccaatagt 48900 ttcaagatac
tggcttcgta aaaaaaaaaa aaaaattagc aaagattctt tcttaccatg 48960
ggactcagta atgttattac atcaatatct tgaaatgttt cttcatctgt gtaataaagt
49020 agttgaaaat aattttaaat tatcacatga gcattagtac tttataaaaa
ttgatctaga 49080 agactcttta gagaatgcta ccaggtattg tttgtcaata
agaaaacaaa atgaggccct 49140 atgattctag gtgaatttta aaaaaatttt
tccccaagga acaattctta aaactttcag 49200 ttacagggaa gagaagaaaa
ttgtaccttc taacagttat ttgttttgcc tagtttatta 49260 acattgaaat
caacccaagt tctgatacta taaaaataaa tgaatattca tgatatagta 49320
gatttagtag tagtaccaag ttttaaaagt ccactgatac agatttaact gcataataaa
49380 actacaaatt gagaaaaact agatgagtat aaacatttag gaagcactga
agttttaaaa 49440 acttgtcagc tcaaatgaca aaagcactta atctggtcac
ataaaaactg tccaaattat 49500 tttaagtata tcaaatttat ttgattcatc
actagcaaat ttaaatgctt caaggaaaat 49560 acgctatgaa ggcttaattc
atttcagtta tttaaggtaa atttaggact tttcccttta 49620 aatgtcatca
ataatatatc tcaagaggta atcattttcc ctcatgattt tcaggtgttg 49680
aatttaaaag ttttaccaat gaaagtgata aaatgaatta gtattctttg gttgcatact
49740 atgaggttat gagcaggttt tagtttaccc agatttttaa tatgatcaga
atctccctca 49800 taaggatcaa ctctttcctt agaactgaat ttctaaagaa
tagcttaata aaattcatat 49860 tattctataa aacgccatgt tcacaaacca
aaaaatgtca tttactcaca atctttacca 49920 atccccaagt acaaatttgt
tcctatatta taaactgcca taaaagcagt acttaaagta 49980 tcca 49984 6 490
PRT MUS MUSCULUS 6 Met Thr Gln Gly Lys Lys Lys Lys Arg Ala Ala Asn
Arg Ser Ile Met 1 5 10 15 Leu Ala Lys Lys Ile Ile Ile Lys Asp Gly
Gly Thr Pro Gln Gly Ile 20 25 30 Gly Ser Pro Ser Val Tyr His Ala
Val Ile Val Ile Phe Leu Glu Phe 35 40 45 Phe Ala Trp Gly Leu Leu
Thr Ala Pro Thr Leu Val Val Leu His Glu 50 55 60 Thr Phe Pro Lys
His Thr Phe Leu Met Asn Gly Leu Ile Gln Gly Val 65 70 75 80 Lys Gly
Leu Leu Ser Phe Leu Ser Ala Pro Leu Ile Gly Ala Leu Ser 85 90 95
Asp Val Trp Gly Arg Lys Ser Phe Leu Leu Leu Thr Val Phe Phe Thr 100
105 110 Cys Ala Pro Ile Pro Leu Met Lys Ile Ser Pro Trp Trp Tyr Phe
Ala 115 120 125 Val Ile Ser Val Ser Gly Val Phe Ala Val Thr Phe Ser
Val Val Phe 130 135 140 Ala Tyr Val Ala Asp Ile Thr Gln Glu His Glu
Arg Ser Met Ala Tyr 145 150 155 160 Gly Leu Val Ser Ala Thr Phe Ala
Ala Ser Leu Val Thr Ser Pro Ala 165 170 175 Ile Gly Ala Tyr Leu Gly
Gln Met Tyr Gly Asp Ser Leu Val Val Val 180 185 190 Leu Ala Thr Ala
Ile Ala Leu Leu Asp Ile Cys Phe Ile Leu Val Ala 195 200 205 Val Pro
Glu Ser Leu Pro Glu Lys Met Arg Pro Ala Ser Trp Gly Ala 210 215
220 Pro Ile Ser Trp Glu Gln Ala Asp Pro Phe Ala Ser Leu Lys Lys Val
225 230 235 240 Gly Gln Asp Ser Ile Val Leu Leu Ile Cys Ile Thr Val
Phe Leu Ser 245 250 255 Tyr Leu Pro Glu Ala Gly Gln Tyr Ser Ser Phe
Phe Leu Tyr Leu Lys 260 265 270 Gln Ile Met Lys Phe Ser Pro Glu Ser
Val Ala Ala Phe Ile Ala Val 275 280 285 Leu Gly Ile Leu Ser Ile Ile
Ala Gln Thr Ile Val Leu Ser Leu Leu 290 295 300 Met Arg Ser Ile Gly
Asn Lys Asn Thr Ile Leu Leu Gly Leu Gly Phe 305 310 315 320 Gln Ile
Leu Gln Leu Ala Trp Tyr Gly Phe Gly Ser Glu Pro Trp Met 325 330 335
Met Trp Ala Ala Gly Ala Val Ala Ala Met Ser Ser Ile Thr Phe Pro 340
345 350 Ala Val Ser Ala Leu Val Ser Arg Thr Ala Asp Ala Asp Gln Gln
Gly 355 360 365 Val Val Gln Gly Met Ile Thr Gly Ile Arg Gly Leu Cys
Asn Gly Leu 370 375 380 Gly Pro Ala Leu Tyr Gly Phe Ile Phe Tyr Ile
Phe His Val Glu Leu 385 390 395 400 Lys Glu Leu Pro Ile Thr Gly Thr
Asp Leu Gly Thr Asn Thr Ser Pro 405 410 415 Gln His His Phe Glu Gln
Asn Ser Ile Ile Pro Gly Pro Pro Phe Leu 420 425 430 Phe Gly Ala Cys
Ser Val Leu Leu Ala Leu Leu Val Ala Leu Phe Ile 435 440 445 Pro Glu
His Thr Asn Leu Ser Leu Arg Ser Ser Ser Trp Arg Lys His 450 455 460
Cys Gly Ser His Ser His Pro His Ser Thr Gln Ala Pro Gly Glu Ala 465
470 475 480 Lys Glu Pro Leu Leu Gln Asp Thr Asn Val 485 490 7 490
PRT MUS MUSCULUS 7 Met Thr Gln Gly Lys Lys Lys Lys Arg Ala Ala Asn
Arg Ser Ile Met 1 5 10 15 Leu Ala Lys Lys Ile Ile Ile Lys Asp Gly
Gly Thr Pro Gln Gly Ile 20 25 30 Gly Ser Pro Ser Val Tyr His Ala
Val Ile Val Ile Phe Leu Glu Phe 35 40 45 Phe Ala Trp Gly Leu Leu
Thr Ala Pro Thr Leu Val Val Leu His Glu 50 55 60 Thr Phe Pro Lys
His Thr Phe Leu Met Asn Gly Leu Ile Gln Gly Val 65 70 75 80 Lys Gly
Leu Leu Ser Phe Leu Ser Ala Pro Leu Ile Gly Ala Leu Ser 85 90 95
Asp Val Trp Gly Arg Lys Ser Phe Leu Leu Leu Thr Val Phe Phe Thr 100
105 110 Cys Ala Pro Ile Pro Leu Met Lys Ile Ser Pro Trp Trp Tyr Phe
Ala 115 120 125 Val Ile Ser Val Ser Gly Val Phe Ala Val Thr Phe Ser
Val Val Phe 130 135 140 Ala Tyr Val Ala Asp Ile Thr Gln Glu His Glu
Arg Ser Met Ala Tyr 145 150 155 160 Gly Leu Val Ser Ala Thr Phe Ala
Ala Ser Leu Val Thr Ser Pro Ala 165 170 175 Ile Gly Ala Tyr Leu Gly
Gln Met Tyr Gly Asp Ser Leu Val Val Val 180 185 190 Leu Ala Thr Ala
Ile Ala Leu Leu Asp Ile Cys Phe Ile Leu Val Ala 195 200 205 Val Pro
Glu Ser Leu Pro Glu Lys Met Arg Pro Ala Ser Trp Gly Ala 210 215 220
Pro Ile Ser Trp Glu Gln Ala Asp Pro Phe Ala Ser Leu Lys Lys Val 225
230 235 240 Gly Gln Asp Ser Ile Val Leu Leu Ile Cys Ile Thr Val Phe
Leu Ser 245 250 255 Tyr Leu Pro Glu Ala Gly Gln Tyr Ser Ser Phe Phe
Leu Tyr Leu Lys 260 265 270 Gln Ile Met Lys Phe Ser Pro Glu Ser Val
Ala Ala Phe Ile Ala Val 275 280 285 Leu Gly Ile Leu Ser Ile Ile Ala
Gln Thr Ile Val Leu Ser Leu Leu 290 295 300 Met Arg Ser Ile Gly Asn
Lys Asn Thr Ile Leu Leu Gly Leu Gly Phe 305 310 315 320 Gln Ile Leu
Gln Leu Ala Trp Tyr Gly Phe Gly Ser Glu Pro Trp Met 325 330 335 Met
Trp Ala Ala Gly Ala Val Ala Ala Met Ser Ser Ile Thr Phe Pro 340 345
350 Ala Val Ser Ala Leu Val Ser Arg Thr Ala Asp Ala Asp Gln Gln Gly
355 360 365 Val Val Gln Gly Met Ile Thr Gly Ile Arg Gly Leu Cys Asn
Gly Leu 370 375 380 Gly Pro Ala Leu Tyr Gly Phe Ile Phe Tyr Ile Phe
His Val Glu Leu 385 390 395 400 Lys Glu Leu Pro Ile Thr Gly Thr Asp
Leu Gly Thr Asn Thr Ser Pro 405 410 415 Gln His His Phe Glu Gln Asn
Ser Ile Ile Pro Gly Pro Pro Phe Leu 420 425 430 Phe Gly Ala Cys Ser
Val Leu Leu Ala Leu Leu Val Ala Leu Phe Ile 435 440 445 Pro Glu His
Thr Asn Leu Ser Leu Arg Ser Ser Ser Trp Arg Lys His 450 455 460 Cys
Gly Ser His Ser His Pro His Ser Thr Gln Ala Pro Gly Glu Ala 465 470
475 480 Lys Glu Pro Leu Leu Gln Asp Thr Asn Val 485 490 8 426 DNA
Homo sapiens 8 agtcatactg tattttttac ttgtattttt gttgttttgt
gggatttaaa aaatattttt 60 attctgagga tagttgaatc cacaggatac
tgagggccag ctgtattcac aacccaaatc 120 acatabaaag cgacaagttc
atacacaata ggcctattag aacaggactg ttctctcttg 180 tttatcattg
cagcctttct agcacaaagc ctgggacatt ctggacattt agtatgtgtt 240
aaatttctct tactacatta tttccaacag tatttactgc aatctgcaat taccttcctt
300 ttgttttgta actgtgtccc ccactagaat gtaagctctg tgcagatagt
gtctcattta 360 ttgatgtatc cctggcatct aataaaacac tgacaacaca
agcacccagt aaatattttt 420 tgaatg 426 9 413 DNA Homo sapiens 9
agtcatactg tattttttac ttgtattttt gttgttttgt gggatttaaa aaatattttt
60 attctgagga tagttgaatc cacaggatac tgagggccag ctgtattcac
aavccaaatc 120 acatacaaag cgacaagttc atacacaata ggcctattag
aacaggactg ttctctcttg 180 tttatcattg cagcctttct agcacaaagc
ctgggacatt ctggacattt agtatgtgtt 240 aaatttctct tactacatta
tttccaacag tatttactgc aatctgcaat taccttcctt 300 ttgttttgta
actgtgtccc ccactagaat gtaagctctg tgcagatagt gtctcattta 360
ttgatgtatc cctggcatct aataaaacac tgacaacaca agcacccagt aaa 413 10
601 DNA Homo sapiens 10 caggagtggc taagctaggt ggtcctacct ctgggtctct
catgaagttg tagtcagcca 60 aaggcttgac caaggttgga ggatctactt
ccaaagtgac tcactccgtg gcatttggta 120 ggaggctaca aacagttcct
ggacaactgg atctctccat aggctgcttg agtgtcctga 180 aaacacggaa
gcaggcttcc ccaggctcca agccccaaaa tgaatgaaaa agagacccgc 240
aaaggaagat gcagtgcctt ttatgaccta gcctctgaag tcaatactgt cacttctgtt
300 ytgatctatc aagagtcact aagcctagtc tacactcaag gggaggggaa
ttagagtcca 360 cctcttccag ggaggaatat cattgaatct gtgaacatat
cttagaacta ccatacctag 420 tttcagtact tttaaacatt cgccattttg
ctttgtccct ctcttttccc cacctacata 480 tacatacaca tacatgttac
tccctaacca tctgagagta gggagcatgc ggtgtatccc 540 tatccctcgt
gtttttctct taaggaaaag gatattctat tatacaacac ggtagttatc 600 a 601 11
601 DNA Homo sapiens 11 tcttaagtta cccattactt acggaaaatg attttttact
gttcccttcg gttcctgtct 60 tggttagaac acagctggag attgtgttaa
tagcttagga cgtctgtttc cgtgagcagg 120 taacaacttt ttgaaacaaa
ttccctcatc tgctgaagaa gggggacaaa aacggcccct 180 atcgcccaga
accgttgcga ggatttagct agctggtgac gccggagcac gaagttgtac 240
aggtagccag cagcacccac gcgagcccgc ggttaccctg gccgcgcggc tactgtagag
300 ygggctggcg gcgagcgggc ggggcggtat cacgcgggag gggcggggcc
cgctcgtcgg 360 ctgatcgcac gattgtgacg cgccgccgga ggcaggccgg
gccctcaaga tggcggcggg 420 cgcccagagc ggctcggccc ggcagtagtg
gtgggacggc actagctgct ggggcctgcc 480 gccccgggag tggctgcagc
agcgccagga atcgaggatg gtaaaatgac ccaggggaag 540 aagaagaaac
gggccgcgaa ccgcagtatc atgctggcca agaagatcat cattaaggac 600 g 601 12
601 DNA Homo sapiens 12 ttttattacc tttctttggg gttttgtttg atttgcttta
cagcagatgc tttctttcca 60 aatcctgtga gttttggaaa agatcgtttt
taaactttct tgtcctatta ttaaggttgt 120 aattaattct tagcctgctt
tgggacacaa aataaaatgt ttgcaccagc aataggtttc 180 acatagaaca
aatgaagact tttcttgagg gctgtgaaca tgggggctat tatcatttct 240
catctttata cacttaatat ttcattctct attctaagag cactgggcac tcctttagaa
300 waggggcttt gttttgtatg tttggatccc acagggccta gtatgtgaat
tttaaagtga 360 taaaaacact tctattttgt actagcacat tcctagatga
atttttattg taattttgtt 420 tattcttata cgtaatcaga ggatatattt
caataaatat caggggaata ttttgcatta 480 tttgtatttt aatccatccc
agctttaaat ttaaaaagta taactattgc agtcatagaa 540 atgattgtaa
aatggtagtt gcttatctac ctctctactt acaatagttc agactactat 600 t 601 13
601 DNA Homo sapiens 13 taatccatcc cagctttaaa tttaaaaagt ataactattg
cagtcataga aatgattgta 60 aaatggtagt tgcttatcta cctctctact
tacaatagtt cagactacta ttatgaactt 120 tttttgtttg tttgtttgag
atggagtctc actctgttgc ccaggctgga ggagtgcagt 180 ggcaggatct
cggctcactg taaccaccgc ctcctgggtt caagtgattc tcctgcctca 240
gcctcccgag tagctgggac tacaggcacg tgccaccatg cctggctaat tttttatatt
300 ktcagtagag acaaagtttc accatattgg tcaggctggt cttgaactcc
tgacctcatg 360 attcacccac cttggcctcc caaagtgcag ggattacagg
tgtgagccac cgtgcccaga 420 ctgaacattt tttaagaaag gggaaaaaat
tgccatttga tactctgttg ttgtgtgttt 480 tttaattcat cgtatcatag
aatatttcag tgctattgct gttgacctca gagtttcaga 540 gtttttataa
agttccgcca atgggtagat tcattcagtg agatgtctga ggctctatgg 600 t 601 14
601 DNA Homo sapiens 14 caagtgattc tcctgcctca gcctcccgag tagctgggac
tacaggcacg tgccaccatg 60 cctggctaat tttttatatt ttcagtagag
acaaagtttc accatattgg tcaggctggt 120 cttgaactcc tgacctcatg
attcacccac cttggcctcc caaagtgcag ggattacagg 180 tgtgagccac
cgtgcccaga ctgaacattt tttaagaaag gggaaaaaat tgccatttga 240
tactctgttg ttgtgtgttt tttaattcat cgtatcatag aatatttcag tgctattgct
300 bttgacctca gagtttcaga gtttttataa agttccgcca atgggtagat
tcattcagtg 360 agatgtctga ggctctatgg tcggtacatg acagtcgtga
acagtatttc acatacctgg 420 tcaatggtac tgatttgatc ccccttctga
tttcttcttt tcaacaatgt taataaaatt 480 ctttcccgtt gtcctgctaa
tgacatatat gtaagcctat ttggccagtt taaatattta 540 taaacaaaac
tagtaagagt tgttaatgat ttttctgaaa attagagcag attagagcag 600 a 601 15
601 DNA Homo sapiens 15 cttatctttt aaaatgctca tcttaaaata tgatctttat
tgttttggcc atacaattgt 60 ggaactacat ctctgacagt ggaaaatgta
tagttctttc agaagtttgt ggtaaaatga 120 ctttaaagat ttgatagaaa
gtaaggcata tctgaattgc atggtcggaa gtacctgaaa 180 aaagtaaaat
tgatatatca tttgaaaatg aaatgcatat ccctggataa gcagagcacc 240
agattttttt tttcttggca tccctgattt taattaaata ggagtcagca accgtttcaa
300 ragcaggacc caagctctga ccctttgcac tcttcacctg caaggatggc
tgaagtagtg 360 gcaggaaagc tctctgggat gtagggcctt tgtagaccca
gagagctgtt aaataacctt 420 tggttgctag catgcaagca ataagaaggg
cctgtggtgc ttttcttttt ctttcttttt 480 ttttttcttt tgagacagag
ttttgctctt gttgctcagg ctggggtgca atggcgtgat 540 cttggctcac
agcaacctct gcctccctgg ttcaaggaat tctcctacct tagcctcctg 600 a 601 16
601 DNA Homo sapiens variation (301)...(301) A may be either
present or absent. 16 taggacttct aaatttttta attactatgg gtacaaagta
gatacagata tttatcaggt 60 acatctgata ttttgataca agcatatgtt
gatacaggta tacagtgtat aataaatcag 120 ggatactggg gtatccatta
cctcaaactt ttatcatttc tttgtgttag gaacatgcca 180 attccacttt
tattttattt tattttttat tttttgagac agagtctcgc tctgtcgccc 240
aggcgacata catagtacag tagtgtactc cagcctgggt gacggggaga ctctgtctca
300 aaataaataa ataaataaat aaataaatct gttcagacta atgtcctaga
gtgtattccc 360 aatgttttct tctagtcgtt tgtggtttca ggttttagat
ttaagtcttt aatccatttt 420 gatttgattg ttgtacatgg caagaggtag
gggtataatt ttattcttct gtatatggat 480 atccactttt cctagcacca
tttaggagac tatccttttc ccaatgtata cttcggtgcc 540 gttgtcaaaa
atgagttgac tgtaaatgca tggatttatt tctgggttct ctattgtgct 600 c 601 17
601 DNA Homo sapiens variation (301)...(301) T may be either
present or absent 17 tgggtacaaa gtagatacag atatttatca ggtacatctg
atattttgat acaagcatat 60 gttgatacag gtatacagtg tataataaat
cagggatact ggggtatcca ttacctcaaa 120 cttttatcat ttctttgtgt
taggaacatg ccaattccac ttttatttta ttttattttt 180 tattttttga
gacagagtct cgctctgtcg cccaggcgac atacatagta cagtagtgta 240
ctccagcctg ggtgacgggg agactctgtc tcaaaataaa taaataaata aataaataaa
300 tctgttcaga ctaatgtcct agagtgtatt cccaatgttt tcttctagtc
gtttgtggtt 360 tcaggtttta gatttaagtc tttaatccat tttgatttga
ttgttgtaca tggcaagagg 420 taggggtata attttattct tctgtatatg
gatatccact tttcctagca ccatttagga 480 gactatcctt ttcccaatgt
atacttcggt gccgttgtca aaaatgagtt gactgtaaat 540 gcatggattt
atttctgggt tctctattgt gctctattgt ctatgtatct gtttttatac 600 c 601 18
601 DNA Homo sapiens 18 tttgttttta atttttttga gacggagttt tgctcttgtt
gcccaggctg gaatgcaatg 60 gcgcaatctt ggctcaccgc aacttccgcc
tcccgcgttc aagcgattct cctgcctcag 120 cttcctgagt agctgggatt
acaggcatgc gccaccacgc ctggctaatt ttgtattttt 180 agtggagacg
gggtttcttc atgttggtca ggctggtctt gaactcctga cctcaggtga 240
tccacccgct ttggcctccc aaagtgctgg aattacaggt gagagccact gcgcccggcc
300 batgaatgat cttttttaag acctccttcc tgaaggaggt ttgctagtat
tttgttgagg 360 atttttgcat caatgttcat cagagatatt gtcccatagt
ttattttgtt tttctccatg 420 ctagttttag gtaatttttc tcttaaataa
acaaagcatt ttcctcctaa agtgcaagca 480 tgcttattag aaaagatatg
gaaaattcag aatagcatag taaacaatgt gatatcactt 540 aaaatcatta
cctaatataa attttattta cattgaggtc agtatttatt gtttttcaga 600 g 601 19
601 DNA Homo sapiens 19 ccgcaacttc cgcctcccgc gttcaagcga ttctcctgcc
tcagcttcct gagtagctgg 60 gattacaggc atgcgccacc acgcctggct
aattttgtat ttttagtgga gacggggttt 120 cttcatgttg gtcaggctgg
tcttgaactc ctgacctcag gtgatccacc cgctttggcc 180 tcccaaagtg
ctggaattac aggtgagagc cactgcgccc ggccgatgaa tgatcttttt 240
taagacctcc ttcctgaagg aggtttgcta gtattttgtt gaggattttt gcatcaatgt
300 ycatcagaga tattgtccca tagtttattt tgtttttctc catgctagtt
ttaggtaatt 360 tttctcttaa ataaacaaag cattttcctc ctaaagtgca
agcatgctta ttagaaaaga 420 tatggaaaat tcagaatagc atagtaaaca
atgtgatatc acttaaaatc attacctaat 480 ataaatttta tttacattga
ggtcagtatt tattgttttt cagagttgaa attaccctac 540 ctatacatgt
tatatcctac tttgattttt aaaaaaatta gcatgcttta agccctgaga 600 a 601 20
601 DNA Homo sapiens 20 gttcttgatt ctcccttccg ctatttatca agctcctccc
aatttcaaat cctgaatcct 60 taatccgttc cctcccctcc aacattcata
ctgtgccact gttttatgcc ctcatttctt 120 gtttgagctg attcagatag
cttcctttta gatgcgcttt gcttctccat tttatccttt 180 aggaaatcac
cagagtgata atactgcagt gagtcttaag acatctctgg cagcggtata 240
aacttaattt tgtattttct ttctcatgta tatcaaattc caaatctctt acatactttc
300 sctggggatt gttctgcttt tgagccatgt tgatatcgtg tttatatttt
tgccacttgc 360 ttcatttatg gttttttttt ttttttttgg ttacatcttt
gccagaataa tcttaaaact 420 ttcatctgat tgtgtcagtc ttaatatctt
ttagtggctc cccatggcct tcagaattaa 480 atatagactc cttagcatgg
aagctggtct ttgagtacct gtagcttgtc tttcaataca 540 cccaacgtgc
agcccatgca ctggttgtac tgaactcgat atatgagacc cataatgccg 600 c 601 21
601 DNA Homo sapiens 21 acaggctgag ccatcttttc caccctatac ctccgcctgt
ctaactctgt tgtgtccttt 60 cagccttcct cctggaagtc tgatatttcc
cacctcccaa gctcccttgg actctgtatg 120 ttccaactgc atactgtgct
tatgctaatg aatttcgttg ttgccttgtc tgtccctctg 180 actttgaaga
cagaggcagt gagtacagat gtttgacaca gtgcccagta catatatgat 240
cttaatattt gttgactatt aacatcgttg ttattgttaa taattataga atgtactgtt
300 wacttttttt aactttttaa aaaatcttgt tttttatagc ctcaaggaat
aggttctcct 360 agtgtctatc atgcagttat cgtcatcttt ttggagtttt
ttgcttgggg actattgaca 420 gcacccacct tggtggtaag taatctttta
aattatttaa cactgactcc aaaatctctt 480 cttcttcagt tttggaggaa
aatgtgggcc ttttcccttt gcacggttaa ttctcccacc 540 agtattgttc
agtattcacc agtattttac tggttgtctt ttccaactgt taactctccc 600 t 601 22
601 DNA Homo sapiens 22 gaggaaaatg tgggcctttt ccctttgcac ggttaattct
cccaccagta ttgttcagta 60 ttcaccagta ttttactggt tgtcttttcc
aactgttaac tctcccttac ctttttttgg 120 gaggggggtg gcgtggaggt
gtttgaattt ggacttgtca ctgggcatgt tcaagcagag 180 gctctgtaac
tactctgagt aaaatggaag agattcttaa accgacaggt ttagaaaaga 240
tgatgtctgt gacctgcatg actcggcata attactttga ggttcattta tgcagctgta
300 vtttccaaaa acaggtttct gttcatttgg gctaagtacc tagaagggct
attctttaat 360 agatctaagc tgattttacc caaattctcc caggtttgaa
actttagaaa agacctccct 420 gcccgaccaa acaactcaga agatagccag
ttttcttata ttggtgtaga taaggggaat 480 ggaaggaggg aaggactatc
tatggtaaat atctatacca tcttgaaagg agtaattatg 540 ataaatgtac
agtttaccaa atcctagagg aatagagttt taaagtaata tactatgttt 600 t 601 23
601 DNA Homo Sapiens 23 aaaaaaaaac agccgggcgc ggtggctcac acctgtaatc
ccagtacttt gggaggccaa 60 ggcgggtgga tcacgaggtc aagagattga
gaccatcctg accaacatgg tgaaaccctg 120 tctctactaa aaatacaaaa
attagctgtg cgtggtggta cgcacctgta atcccagcta 180 cttgggaggc
tgaggcagga gaatctcttg aacccgggaa gtggaggttg cagtgagccg 240
agactgcacc actaccctcc agcctggata cagggtgaga ctctgtctca aaaataaaaa
300 rtcattttga atatatagag catgttcatg agtattgcta taaaaaaata
tcagagggtt 360 tttttttttt ttttagttta
ctgatttcag atagaaatct ttaaaaaatt aatttacaca 420 tttcctggct
tcataatcca agtacaacga tttggaactt cctcagatga tgcaagttga 480
ttatgacatt cataacttca ttgaattgta ataacctgtt tttgtcaagg gttactgaag
540 tgctgtaata actttttggg ctcatgactt tacattagct ttcctaatgc
gccagcgtgc 600 t 601 24 601 DNA Homo sapiens 24 cttgactcct
ccagtgctca gtcttttggg gaatgcaggt agtaacttgt ttgtacccat 60
gttttagata gttgaggttg tcaggcagcc caaccactag ctaagtaggg tgatcaaaat
120 gtggatgagc tgttagcaag ctatgaaaaa aagcattttg tgatgtttcc
ataatttgtt 180 atcagtattt caagtgtgta tagctatttt taaaatttgc
ttcttgttta aattttttta 240 ggtatgttat ctttcgtgtt attttggtac
atttttttcc tagttggaca aagggaggct 300 htctttttta agaacaagga
aggagtcccc ttaattagaa aggcttgttt attcattttt 360 catagactaa
tgtgcttaat atattccttt tttttttttt tttttttttt gagacggagt 420
ctcgctctgt ctgtccccag gctggagtgc agaggcacga tcttggctca ctgcatcccc
480 cacctcccag gttcaagtga ttttcctgcc tcagcctccc aagtagctgg
gactacaggc 540 acatgccacc atgcccagct aatttttgta cttttagtag
agatggggtt tcaccatgtt 600 g 601 25 601 DNA Homo sapiens variation
(301)...(301) T may be either present or absent 25 accactagct
aagtagggtg atcaaaatgt ggatgagctg ttagcaagct atgaaaaaaa 60
gcattttgtg atgtttccat aatttgttat cagtatttca agtgtgtata gctattttta
120 aaatttgctt cttgtttaaa tttttttagg tatgttatct ttcgtgttat
tttggtacat 180 ttttttccta gttggacaaa gggaggctat cttttttaag
aacaaggaag gagtcccctt 240 aattagaaag gcttgtttat tcatttttca
tagactaatg tgcttaatat attccttttt 300 tttttttttt ttttttttga
gacggagtct cgctctgtct gtccccaggc tggagtgcag 360 aggcacgatc
ttggctcact gcatccccca cctcccaggt tcaagtgatt ttcctgcctc 420
agcctcccaa gtagctggga ctacaggcac atgccaccat gcccagctaa tttttgtact
480 tttagtagag atggggtttc accatgttga ccagaatggt ctcgatctct
taacctcgtg 540 atccgcccgc cttggcctcc caaagtgctg ggattacagg
tgtgagccac tgtgcctggc 600 c 601 26 601 DNA Homo Sapiens
misc_feature (1)...(601) n = A,T,C or G 26 ttcaaagata ttctttgaag
tattttttta atcagataac cagttttaga catattaatt 60 ttgaatgtct
ggtttgggat ttatgatagc cttaatttct taatttttaa aactaatgtg 120
acattttaag accaaaaaaa ctgtgtgttg caattatctt tcacttttaa gccctcatag
180 aacagtcaaa aaacaaaagc tgtgttttgt ggaagatctg cccaggggaa
gatggtgagc 240 ctctaccaac aaggggattt agctaaaaag aaggattttg
tactgacaaa tatttttaaa 300 nattgaggtc taacactttt gagaggttat
gaatatatgg ttggtcatag tagatagttc 360 agtcagaatc agtgattatt
gcttgattat gtaacatatt agctaagtga tgagaataac 420 agtaggtata
aggatctgta atgccaagga gtggaattta ccggtttttt tttttctttc 480
cttttttttt tttttcattg agacggagtc ttaatctggc atccaggttg gagtgcagtg
540 gcgtgatctc ggctcactgc aacctccacc gccaaggttc aagagattct
cctgcctcag 600 c 601 27 601 DNA Homo sapiens variation
(301)...(301) T may be either present or absent 27 aaaagctgtg
ttttgtggaa gatctgccca ggggaagatg gtgagcctct accaacaagg 60
ggatttagct aaaaagaagg attttgtact gacaaatatt tttaaagatt gaggtctaac
120 acttttgaga ggttatgaat atatggttgg tcatagtaga tagttcagtc
agaatcagtg 180 attattgctt gattatgtaa catattagct aagtgatgag
aataacagta ggtataagga 240 tctgtaatgc caaggagtgg aatttaccgg
tttttttttt tctttccttt tttttttttt 300 tcattgagac ggagtcttaa
tctggcatcc aggttggagt gcagtggcgt gatctcggct 360 cactgcaacc
tccaccgcca aggttcaaga gattctcctg cctcagcctc cccagtagct 420
ggaattacag gtgcatgtca ccacgcccag ctaatttttt tttttattat tttttttgag
480 acagagtttc actctgtcgt ctaggctgga attcagtggc actatctcgg
ctcactgcaa 540 ccttcgcctc ccaggttcaa gcagttctct gcctcagcct
cccaagtatg tgggattaca 600 g 601 28 601 DNA Homo sapiens 28
cccacctaag cctcccaaag tgctgggatt acaggcgtga gccactgttc ctggccggct
60 ttaccctttt gacagaccta tggctctgga aataataggc cagtgtttga
tggttcaagc 120 tcctagatac acagtccatg ttacggaaca ctcaaaatcc
actagcatct cttctaccta 180 gatggtttcg tgtccttggc tacagaaaca
gccccaaagc gtttaacatt ttaaggatta 240 tttactttca acatttttaa
agttaaaaaa aagttaagat ccataaaatt ttttggaaaa 300 rtgttacatt
ttctctgttc acctctaaag accagtgcta aaggatcctg acatcaaaaa 360
tctttacaac attcgaatta cttgttatat ttgtctgtta aaattttgtt agaaattgta
420 tggccccaaa ggagaaattg ctttggagaa aaaagttagg tagcagagga
acagtttgga 480 agggttgggg gttggccaga taaagaaagg gaagaaacat
tcaaaattga aaggatgccg 540 tgtataaaat atgaatattg gaaagcatag
aatatttcag aaacagtgaa gcgaacagat 600 t 601 29 601 DNA Homo sapiens
29 aggaggctga ggcaggagaa ttgcttgaac ctgggaggcg gaggttgcag
tgagccaaga 60 ttgcaccatc gcactccagc ctgggcgaca agagcccaac
tccgtctcaa acaaacaaaa 120 aaaggaatag tgctgcagta aatgtaggag
tacagctatc tcttcaatat actgatttcc 180 tttttttgga ggggtatata
cctagtagtg agattgctgg atcatatggt agctccattt 240 ttaggttttt
tgaggagcct tccaactgtt ttccttagtg attgtactaa tttacattcc 300
vaccaacagt gtatgagtgt tcccttttct ccacatcctt gcctatcttt tggataaaag
360 ctgtttttaa ctggggtgag atgatatttc actgtagttt tgatttgcat
ttccccgatg 420 atcagtgatg gttgagcatt ttttcatata cctattggtc
actttgagaa atgtctattc 480 agatcttttg cccgtttttt aaaaatcaga
ttatgagatt cttttcttac agaattgttt 540 gagcccctta tacatttttg
ttattaatcc cttgtcagat ggatagtttg cagatatttt 600 c 601 30 601 DNA
Homo sapiens 30 gcacattttt gttaaatttc tcgctattgg caggagaaga
ataactgaag aaaggggagc 60 aattctgatc cttctaaagg ttcttcttgc
aacatgtcag aaagtatatt tagcataatg 120 tttcttctta aagggaagac
cttccctacc ttccttatta cccacattcc cattctctgt 180 tgttattact
gagcgatagc attggataat agaagcatta gtttctaagt caaacaggaa 240
ctcagttgcc tcatatgtaa agtgataata ttatctaatt cacagtgttg ggattaaaca
300 rgagtacata taggctgtaa aaatggtagc tgctgtttat ttttccagtt
gcctggaatt 360 gccttttcat ttgatgcatt ccagcggttc tcttgctgcc
cactgcaaaa aattgatacc 420 acatgatttg agaacaagcc ttggaaagga
tagaataact tgttatacat tttcataggt 480 tgggattttt tttctttata
gaatctttct agatctactt cgtggcaatt aaaaattact 540 tattaatttt
cccaatctcc tatcctagat aatatatcca tctgaaagag aattataagt 600 c 601 31
601 DNA Homo sapiens variation (301)...(301) A may be either
present or absent 31 agacaaatac cttgtgataa ataaggactg aatattgtgt
tgggctgaat tagttttaaa 60 agggactgat ttctgattca aaggacgtta
tagtgaagaa tcataagatt tttggggagg 120 aaacacctat agagagaaag
ttagaaaaag aactaataat ttctggcctg ttcagtggct 180 cacacctgta
atctcagcac tttgggaggt tgaggcaggc ggatcacttg agatcaggag 240
ttcacgacca gcctggccaa catggtgaaa ccttgtctct atttaaaaaa aaaaaaaaaa
300 aaaaagtgaa aagaaaaaga actaatgatt tcagttgtaa acttggaaca
ttaaatgata 360 caaggctgat gatagccagg atatttaaaa aatagtctaa
ttaagctata gtttacatac 420 cataaaattt atccttttta tgagtatagt
tcagtgaatt ttagtaaatt tatactgtta 480 tgcaaacacc accataaccc
aatttggggt tggtcggttg gttggttggt tcgttggttt 540 ggtttttttg
acgtaattta ttttcccata gccaaagttt tgaaattaac aattttcaat 600 c 601 32
601 DNA Homo sapiens variation (301)...(301) A may be either
present or absent 32 gttgtaaact tggaacatta aatgatacaa ggctgatgat
agccaggata tttaaaaaat 60 agtctaatta agctatagtt tacataccat
aaaatttatc ctttttatga gtatagttca 120 gtgaatttta gtaaatttat
actgttatgc aaacaccacc ataacccaat ttggggttgg 180 tcggttggtt
ggttggttcg ttggtttggt ttttttgacg taatttattt tcccatagcc 240
aaagttttga aattaacaat tttcaatctg gaggttctgt gtattaagcc atgttctggc
300 aaaaaacaaa acaaaacaaa acaaaacaaa acaaaacaaa aaacactgaa
atcttctaga 360 aataatatgg atgcagaaaa aaggtgggga agtggccagg
cacagtggca tgtgcctgta 420 ataccaccag tttgggaggc caaggcaggg
ggattgcttg aggccaggag tttgaggctg 480 cagctatgat catgccacta
cactccagtc tagggtacag agtgagaccc tgtctcttaa 540 aaaaaaaagt
tggaggggcc aggtgcagtg gcttataatc ccagcacttt gggaggctga 600 g 601 33
601 DNA Homo Sapiens variation (301)...(301) C may be either
present or absent 33 aacttggaac attaaatgat acaaggctga tgatagccag
gatatttaaa aaatagtcta 60 attaagctat agtttacata ccataaaatt
tatccttttt atgagtatag ttcagtgaat 120 tttagtaaat ttatactgtt
atgcaaacac caccataacc caatttgggg ttggtcggtt 180 ggttggttgg
ttcgttggtt tggttttttt gacgtaattt attttcccat agccaaagtt 240
ttgaaattaa caattttcaa tctggaggtt ctgtgtatta agccatgttc tggcaaaaaa
300 caaaacaaaa caaaacaaaa caaaacaaaa caaaaaacac tgaaatcttc
tagaaataat 360 atggatgcag aaaaaaggtg gggaagtggc caggcacagt
ggcatgtgcc tgtaatacca 420 ccagtttggg aggccaaggc agggggattg
cttgaggcca ggagtttgag gctgcagcta 480 tgatcatgcc actacactcc
agtctagggt acagagtgag accctgtctc ttaaaaaaaa 540 aagttggagg
ggccaggtgc agtggcttat aatcccagca ctttgggagg ctgaggcagg 600 a 601 34
561 DNA Homo Sapiens 34 agcagaaaga aatggctacc aagtggagag aactgaggag
aagggaaatg acatgaaaca 60 actgtactga cttgctcact gtgtcacaaa
tgtgatctct gtaaatgccc tcaaatgtct 120 tcagtgaccc tcatagtgag
aaccattttc cctttcccca cacttgtgcc agagccctgc 180 tgagatctgg
gtccctctga aaccacacct agggctgcaa taacaaaata accactacat 240
ttgaaaatat atatttatat gtatgtgtgt gtgtgtatgt rtgtgtgtgt atatatatat
300 agtttgtttt ttgttgagac ggagtctcgc tctgtcaccc aggctggagt
gcagaggtgt 360 gatcttggct tactgcaacc tccgcctcct gggttcaaac
gattctgctg cctcagcctc 420 cccagtagct atgcccacca ccatgcccag
ctaatttttg tatttttagt agagacgggg 480 tttcaccata ttggccagtc
ttgtcttgaa ctcctgacct ttggtccgcc tgcctcggcc 540 tcccaaagtg
ttgggattat a 561 35 385 DNA Homo Sapiens 35 agcagaaaga aatggctacc
aagtggagag aactgaggag aagggaaatg acatgaaaca 60 actgtactga
cttgctcact gtgtcacaaa tgtgatctct gtaaatgccc tcaaatgtct 120
tcagtgaccc tcatagtgag aaccattttc cctttcccca cacttgtgcc agagccctgc
180 tgagatctgg gtscctctga aaccacacct agggctgcaa taacaaaata
accactacat 240 ttgaaaatat atatttatat gtatgtgtgt gtgtgtatgt
atgtgtgtgt atatatatat 300 agtttgtttt ttgttgagac ggagtctcgc
tctgtcaccc aggctggagt gcagaggtgt 360 gatcttggct tactgcaacc tccgc
385 36 361 DNA Homo Sapiens 36 agcagaaaga aatggctacc aagtggagag
aactgaggag aagggaaatg acatgaaaca 60 actgtactga cttgctcact
gtgtcacaaa tgtgatctct gtaaatgccc tcaaatgtct 120 tcagtgaccc
tcatagtgag aaccattttc cctttcccca cacttgtgcc agagccctgc 180
wgagatctgg gtccctctga aaccacacct agggctgcaa taacaaaata accactacat
240 ttgaaaatat atatttatat gtatgtgtgt gtgtgtatgt atgtgtgtgt
atatatatat 300 agtttgtttt ttgttgagac ggagtctcgc tctgtcaccc
aggctggagt gcagaggtgt 360 g 361 37 601 DNA Homo Sapiens 37
agtagagacg gggtttcacc atattggcca gtcttgtctt gaactcctga cctttggtcc
60 gcctgcctcg gcctcccaaa gtgttgggat tataggcgtg agccatggcg
cctggccccc 120 atgtgaatat attaaatacc atttaaaaaa ccaccacaac
ccagttatag aacatttcca 180 tcagcccaaa atgttccctc agccctgttt
gccatctgtc cccatgctcc acctgtgacc 240 ccaagcaacc aacaatttag
cttctgtcac catggttttg ccttttctag aaacttcata 300 kaaattaaat
aatacaaaac atcttttgtg tctaacttct ttcacttggc ataatctttt 360
gagattgatc catgttgata ctatagatca ataggttcta tttttgtctc ttttcctttt
420 tttttttttt gagacagggt cctgctctat cccccaggct ggagtgcagt
ggcatgatca 480 tggctcactg aagccttggc ttcctgggct caagcgatcc
ttctgcctca gcctccaaag 540 cagttgggac cacaggcatg atccaccatg
cccagctaat ttttttcttt ttgagacagg 600 g 601 38 601 DNA Homo Sapiens
38 gcccttaacc aagcttgtcc aacccatggt ccacaggctg cacacatggc
ccaacagaaa 60 ttcataaagt ttcttaaaac attatgcagt ttttttttct
ttaagctcat cagctattgt 120 tagtgtattt tatgtgtggc ccaagaccgt
tcttccagcg tggcccaggg aagccaaaag 180 attagacacc cctcccctaa
ggaccagcat gactggcagt caaggagggg tgtttgtaca 240 gtgcccaggc
tctcaaccct tcctcaacta aaagagttaa aaaatttaaa taggccgggc 300
rtggtggctc acgcctgtaa tcccagcact ttgggaggcc gaggcgggcg gatcacgagg
360 tcaggagatc gagaccatct tggctaacac gggggaaacc ccatctctac
taaaaataca 420 aaaaattagc cgggcgaggt ggcgggcgcc tgtagtccca
gctattcggg aggctgaggc 480 aggagaatgg cgtaaacccc gggggcggag
cctgcagtga gccgagatcg cgccactgca 540 ctccagcctg ggcgacagag
cgagactccg tctcaaaaaa aaaaaaaaaa aaaaaaaaaa 600 t 601 39 601 DNA
Homo Sapiens 39 ctttaagctc atcagctatt gttagtgtat tttatgtgtg
gcccaagacc gttcttccag 60 cgtggcccag ggaagccaaa agattagaca
cccctcccct aaggaccagc atgactggca 120 gtcaaggagg ggtgtttgta
cagtgcccag gctctcaacc cttcctcaac taaaagagtt 180 aaaaaattta
aataggccgg gcatggtggc tcacgcctgt aatcccagca ctttgggagg 240
ccgaggcggg cggatcacga ggtcaggaga tcgagaccat cttggctaac acgggggaaa
300 vcccatctct actaaaaata caaaaaatta gccgggcgag gtggcgggcg
cctgtagtcc 360 cagctattcg ggaggctgag gcaggagaat ggcgtaaacc
ccgggggcgg agcctgcagt 420 gagccgagat cgcgccactg cactccagcc
tgggcgacag agcgagactc cgtctcaaaa 480 aaaaaaaaaa aaaaaaaaaa
aatttaaata gaggcagggt cttgctgtgt tgcccaggct 540 ggtcacaaac
ttctggcttc acgcagtcct cccaccttgg cctccccaag tgctgagatt 600 a 601 40
601 DNA Homo Sapiens 40 ccaggcttgg tgtctcatac ctgtactccc agcccttcgg
gaggctgagg tgggaggatc 60 gcttgagctc aggagttcga gactagccta
ggcaacatag cgtgacttcc acctctataa 120 aaaataaaca aaattagctg
ggcgtggtgg tgtgtgcctg tagccccatc aggagatctt 180 caggcaggaa
gatctacttg agcctgagag gtcaagacta cagtgagccg tgatggcacc 240
actgcactcc agcctgggcg acagagcaag acccagttcc cccactctcg cccccacaag
300 raaaaaagat aaatggcaca ggtaggaaga gaaaagggag ggtgtgcaac
agaaggcctg 360 acataaatca agattatgaa aggagttatg tggtgttgag
gaaaaaagta gcctgactaa 420 tctctgtcta tccttaattt attgcaggtt
tcagcaacat ttgctgcaag tttagtcacc 480 agtcctgcaa ttggagctta
tcttggacga gtatatgggg acagcttggt ggtggtctta 540 gctacagcaa
tagctttgct agatatttgt tttatccttg ttgctgtgcc agagtcgttg 600 c 601 41
601 DNA Homo Sapiens variation (301)...(301) R may be either
present or absent 41 tactatttct agcttcaggt ttgtcctaaa aatcatcagt
ctggaaaaac aatgcattta 60 aatattcatt cctagccatg agaaaagtgc
tttttaactt tggaggaaaa tatactgtag 120 cctttatata aaaatggctt
taaaaaaagt ttttgaggcc aggtgcggtg gttcatgtct 180 gtattcccag
cactttgggt ggccaaggtc agggaccgct tgagcccagg agttcaagac 240
cagctcaagc aacttggcaa aaccccatct ctaccaaaaa aaaaaaaaaa aaaaaaaaaa
300 rgaaagaaag cccggtgtgg tggtgtgtgc ctgtagtccc agctactcag
gaagctgaga 360 tgggaggatt gcttgatcct gggaggtcga gggtgcagtg
agccacagtt gtcccatggt 420 actccagtat gggcaacaga atgagaccct
gtctcaaaaa aaaagtgtaa ggaaaataca 480 cagttagtat gtgtagaact
tgatgaatta tcaaagatta acccaacctt gcaatagatg 540 tgatcaacct
gggcatgagt atctttttca tacattgcca acattagatt tgctaacatt 600 t 601 42
601 DNA Homo Sapiens 42 tcagccccat tacttcctgg gcaccggtac gtataagagt
tcctaacact tgcactaagt 60 aagtgtttac atgagaacat caatatagtt
ctacacattt cttttttctc agtgttttcc 120 tatccagccc tctctgtggg
ggtgactccc acacttactc ttccagtcca gtccctgagc 180 tcctatatga
cacattggct gggtatctca gccttaacat ggccaaaatt aaaatctggg 240
ttccatccct tgcccgccac ccctatgctc ctcatctcat tcagtggctt caccaccgcc
300 wggttttggg ggccagaagc cttagcgaca ttcatgaatc ctttctccct
aaccttacat 360 tcagcccatc aaatgatact tcctatcacc tctctctcca
aaatatatct tgaatcagag 420 cgtttctgat attctccatt agtaggaacc
caatctgagc cgtggccata tcttccatct 480 ggtctctctg cttccatctt
gcctcactat agttcattct gcacttggca gagtaatttt 540 tgtaaaatgg
aaatttaatc gcatcttacc tataactcac tttcctttgc aaccagaata 600 a 601 43
601 DNA Homo Sapiens 43 attagttaga acttttgacc cttccatttt caactactga
tttaagtggt cctcagtaga 60 aatgtactga ataggaagtt ttatctttca
gttttctaac tctcagtctg gatctatgtc 120 agcagaggga cttttcatct
gcttatgtga cctggactag tgatctcaga catattcagg 180 gcaattattg
ctgaaaatca gccaaattgt agaaaagtgc caatagtcct tttatagtgt 240
agattgaaag aagtcacttt ttaaaacttt attctgataa atcttttttt ttttttttca
300 raccatagtc ttgagtttac ttatgaggtc aattggaaat aagaacacca
ttttactggg 360 tctaggattt caaatattac agttggcatg gtatggcttt
ggttcagaac cttggtaagt 420 ataaatattt taatgttaat atttttaatt
ttggtgttag cccttgtgtt tttatttgct 480 tctcaactga ggggtagact
gtaatctgtc tcatactatg ctttttatct ttcaaaatgt 540 gtctaatata
agtctgccac ttgtatattt atatgttctc ctagaatggc ttgaggatta 600 a 601 44
601 DNA Homo Sapiens 44 taagtggtcc tcagtagaaa tgtactgaat aggaagtttt
atctttcagt tttctaactc 60 tcagtctgga tctatgtcag cagagggact
tttcatctgc ttatgtgacc tggactagtg 120 atctcagaca tattcagggc
aattattgct gaaaatcagc caaattgtag aaaagtgcca 180 atagtccttt
tatagtgtag attgaaagaa gtcacttttt aaaactttat tctgataaat 240
cttttttttt ttttttcaga ccatagtctt gagtttactt atgaggtcaa ttggaaataa
300 raacaccatt ttactgggtc taggatttca aatattacag ttggcatggt
atggctttgg 360 ttcagaacct tggtaagtat aaatatttta atgttaatat
ttttaatttt ggtgttagcc 420 cttgtgtttt tatttgcttc tcaactgagg
ggtagactgt aatctgtctc atactatgct 480 ttttatcttt caaaatgtgt
ctaatataag tctgccactt gtatatttat atgttctcct 540 agaatggctt
gaggattaaa aaggtgacct tttatagcta aatgacaggc tgaatttttg 600 a 601 45
601 DNA Homo Sapiens 45 tctggatcta tgtcagcaga gggacttttc atctgcttat
gtgacctgga ctagtgatct 60 cagacatatt cagggcaatt attgctgaaa
atcagccaaa ttgtagaaaa gtgccaatag 120 tccttttata gtgtagattg
aaagaagtca ctttttaaaa ctttattctg ataaatcttt 180 tttttttttt
ttcagaccat agtcttgagt ttacttatga ggtcaattgg aaataagaac 240
accattttac tgggtctagg atttcaaata ttacagttgg catggtatgg ctttggttca
300 raaccttggt aagtataaat attttaatgt taatattttt aattttggtg
ttagcccttg 360 tgtttttatt tgcttctcaa ctgaggggta gactgtaatc
tgtctcatac tatgcttttt 420 atctttcaaa atgtgtctaa tataagtctg
ccacttgtat atttatatgt tctcctagaa 480 tggcttgagg attaaaaagg
tgacctttta tagctaaatg acaggctgaa tttttgaatg 540 agattataca
gcttttgaat ctttaaggag
catttaatct aaatcagtcc gttactagga 600 a 601 46 601 DNA Homo Sapiens
46 tcatgtgttt ggaaatattt gatgatgttt cgtcatctat attatacatt
atcctcaata 60 taacctctca attgcctgta gaaataatac ccagcacatt
ttacagtttg gaacatgata 120 tccctatttt acattacacc ctcacagcac
tcttgtgaat taagttgctg tctttgtata 180 cagggtcaga ttgttaagcg
acttgcccat agtcacctag taagcaagtt cagttctcct 240 tttctctaca
gccatttcac agtaagaatt acttaattat gtagtttgac tttcaggtac 300
rgtggagaag aatttactgt ttttgttttg ctgctctcct tataggatga tgtgggctgc
360 tggggcagta gcagccatgt ctagcatcac ctttcctgct gtcagtgcac
ttgtttcacg 420 aactgctgat gctgatcaac agggtgagtt gataggaact
agcgataatt atttaaaagt 480 acagaatgtt ctaatcctgt gttctgtctc
ctatgtactg aaacataagt atatcttcag 540 ggtagagact tttaaaattg
cttttgatat aaacaggaaa agcagattct agggtattta 600 t 601 47 601 DNA
Homo Sapiens 47 cttaggtaga tacatattcc cttttctctc acttagaata
tgtggcttat ctgttctgtt 60 catagaaaat ttactgatga ggctgggcat
ggtggctcac acctgtaatc ccaacacttt 120 gagaggccga ggcaggcaga
ttgcttgagt tcaggagttg gagaccagcc tgggcaacat 180 ggggaaaccc
catcactaaa atgcaaaaat tagctgggca gggtggcgca tgcttgtagt 240
cccagttact tgggaggctg aggttggagg atcacttgag tctcagaggc ggaggttgca
300 stgagccaaa atcaggccag tgaactccaa cctgggcgac acagtgagag
accttgagag 360 acctgtctca aaaaaattta ctgatgaatg ttggccacag
aatattaact aagcattaag 420 tttttgctgt gttgtgctag acaccttgtg
ggatatattc atagaccttt tatgaatgtt 480 gtcccagcca cttgggaagc
tgaggcagga ggattacttg agctcaagag tttgaagcta 540 gcttaggcaa
cacagcaaga ctcccatctc taataaaaaa aaaaaaagaa atcatatagt 600 t 601 48
601 DNA Homo sapiens 48 agcttttatg tgagattcta tttgagattg gataaaatgc
ttaaaaacca gagtttaagg 60 gactgtgttc ttctacatac caccttgtga
aaattggctg tgcatatttt ttttccactt 120 gagaatgaaa aattttaagt
acctagtttg tcaatggcat atgtaacaaa ccatttctct 180 ttactactag
tctcttttga aacttttcta atatcacagt tgtgtatgtt aactaacttt 240
tcatacaaaa ggcaggctta tggtaaataa cctttgttca ctgtttgcta tatttccctc
300 dtttcaactg aaaattaatg ccaaacaatg ctgatcattt tggccaatat
tagcagctca 360 tcagtttcct ggcttattta gcagagttct gtacttatct
tccaacccac taagactact 420 tttaaataaa agaatgtttg tgggctatac
acaaaactgg cagtgcaagc ttctgctaag 480 aatgaatgta attttgggct
aaaacaaagg tctctttttc ttggtaacct gtgtttttct 540 cacttccagt
cacttgaaat tataattacc ttcttgaaac aaagaaatgg taatttattt 600 t 601 49
601 DNA Homo sapiens 49 cacagccatc ctcataatac acaagcgcca ggagaggcca
aagaaccttt actccaggac 60 acaaatgtgt gacgactgaa atcaggaaga
tttttctatc agcacccagg tcttagtttt 120 cacctctagt tctggatgta
cattccattt ccatccacag tgtactttaa gattgtctta 180 agaaatgtat
ctgcatgaac tccgtgggaa ctaaaggaag tgggaactta gaaccagaca 240
gttttccaaa gatgttacaa tttcttttga aaaacctttt gtttattagc accaatttct
300 dgccactaag ctatttgttt tattatacat cctttaatta aaaactatat
atgtaacttc 360 ttagatatta gcaaatgtct ctgctaccat ttccttaagg
tgttgagctt taactctatg 420 ctgactcagt gagacacagt aggtagtatg
gttgtggacc tatttgtttt aacattgtaa 480 aattttgagt cagattttaa
tattgtaaaa tcttgggtca aataattcaa agccttaatg 540 cagatgcact
aaaacaaaga aatggtaaat gaattgtttg catttaaaaa aaaaaactct 600 t
601
* * * * *
References