U.S. patent number 9,765,342 [Application Number 14/389,677] was granted by the patent office on 2017-09-19 for chimeric antigen receptors targeting b-cell maturation antigen.
This patent grant is currently assigned to The United States of America, as represented by the Secretary, Department of Health and Human Services. The grantee listed for this patent is The United States of America, as represented by the Secretary, Department of Health and Human Services, The United States of America, as represented by the Secretary, Department of Health and Human Services. Invention is credited to James Noble Kochenderfer.
United States Patent |
9,765,342 |
Kochenderfer |
September 19, 2017 |
Chimeric antigen receptors targeting B-cell maturation antigen
Abstract
The invention provides an isolated and purified nucleic acid
sequence encoding a chimeric antigen receptor (CAR) directed
against B-cell Maturation Antigen (BCMA). The invention also
provides host cells, such as T-cells or natural killer (NK) cells,
expressing the CAR and methods for destroying multiple myeloma
cells.
Inventors: |
Kochenderfer; James Noble
(Bethesda, MD) |
Applicant: |
Name |
City |
State |
Country |
Type |
The United States of America, as represented by the Secretary,
Department of Health and Human Services |
Washington |
DC |
US |
|
|
Assignee: |
The United States of America, as
represented by the Secretary, Department of Health and Human
Services (Washington, DC)
|
Family
ID: |
48045750 |
Appl.
No.: |
14/389,677 |
Filed: |
March 15, 2013 |
PCT
Filed: |
March 15, 2013 |
PCT No.: |
PCT/US2013/032029 |
371(c)(1),(2),(4) Date: |
September 30, 2014 |
PCT
Pub. No.: |
WO2013/154760 |
PCT
Pub. Date: |
October 17, 2013 |
Prior Publication Data
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Document
Identifier |
Publication Date |
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US 20150051266 A1 |
Feb 19, 2015 |
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Related U.S. Patent Documents
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Application
Number |
Filing Date |
Patent Number |
Issue Date |
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61622600 |
Apr 11, 2012 |
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Current U.S.
Class: |
1/1 |
Current CPC
Class: |
C07K
14/70521 (20130101); A61P 35/00 (20180101); C07K
16/18 (20130101); A61P 35/02 (20180101); C07K
14/70503 (20130101); C07K 14/7051 (20130101); C07K
14/70578 (20130101); C07K 16/2878 (20130101); C12N
15/62 (20130101); A61P 43/00 (20180101); C07K
14/70517 (20130101); C07K 2319/03 (20130101); C07K
2319/00 (20130101); A61K 48/00 (20130101); A61K
2039/505 (20130101); C07K 2317/73 (20130101) |
Current International
Class: |
C07K
14/705 (20060101); C12N 15/62 (20060101); C07K
16/26 (20060101); C07K 16/28 (20060101); C07K
14/725 (20060101); C07K 16/18 (20060101); A61K
39/00 (20060101); A61K 48/00 (20060101) |
References Cited
[Referenced By]
U.S. Patent Documents
Foreign Patent Documents
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2008-540678 |
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Nov 2008 |
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JP |
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2012-501180 |
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Jan 2012 |
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JP |
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WO 92/08796 |
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May 1992 |
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WO |
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WO 94/28143 |
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Dec 1994 |
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WO |
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WO 2009/091826 |
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Jul 2009 |
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WO |
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WO 2010/104949 |
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Sep 2010 |
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WO |
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WO 2011/041093 |
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Apr 2011 |
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WO |
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WO 2012/031744 |
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Mar 2012 |
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WO |
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Primary Examiner: Ouspenski; Ilia
Attorney, Agent or Firm: Leydig, Voit & Mayer
Parent Case Text
CROSS-REFERENCE TO RELATED APPLICATIONS
This patent application is the U.S. National Phase of International
Patent Application No. PCT/US2013/032029, filed Mar. 15, 2013,
which claims the benefit of U.S. Provisional Patent Application No.
61/622,600 filed Apr. 11, 2012, each of which is incorporated by
reference in its entirety herein.
Claims
The invention claimed is:
1. A chimeric antigen receptor (CAR) comprising an antigen
recognition moiety and a T-cell activation moiety, wherein the
T-cell activation moiety comprises a transmembrane domain, wherein
the antigen recognition moiety is directed against B-cell
Maturation Antigen (BCMA).
2. The CAR of claim 1, wherein the antigen recognition moiety
comprises a monoclonal antibody directed against BCMA, or an
antigen-binding portion thereof.
3. The CAR of claim 2, wherein the antigen recognition moiety
comprises a variable region of a monoclonal antibody directed
against BCMA.
4. The CAR of claim 2, wherein the antigen recognition moiety
comprises an antigen binding fragment of a monoclonal antibody
directed against BCMA.
5. The CAR of claim 2, wherein the antigen recognition moiety
comprises a single chain variable fragment (scFv) directed against
BCMA.
6. The CAR of claim 1, wherein the transmembrane domain is a CD28
transmembrane domain or a CD8a transmembrane domain.
7. The CAR of claim 1, wherein the T-cell activation moiety
comprises a T-cell signaling domain of any one of the following
proteins: a human CD8-alpha protein, a human CD28 protein, a human
CD3-zeta protein, a human FcR.gamma. protein, a CD27 protein, an
OX40 protein, a human 4-1BB protein, or any combination of the
foregoing.
8. The CAR of claim 7, wherein the T-cell activation moiety
comprises a T-cell signaling domain of a human 4-1BB protein.
9. The CAR of claim 7, wherein the T-cell activation moiety
comprises a T-cell signaling domain of a human 4-1BB protein and a
human CD3-zeta protein.
10. The CAR of claim 1, wherein the CAR comprises the amino acid
sequence of SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 8,
SEQ ID NO: 9, SEQ ID NO: 10, SEQ ID NO: 11 or SEQ ID NO: 12.
11. The CAR of claim 1, wherein the antigen recognition moiety
comprises the (i) heavy chain complementarity determining region
(CDR)1, (ii) heavy chain CDR2, (iii) heavy chain CDR3, (iv) light
chain CDR1, (v) light chain CDR2, and (vi) light chain CDR3 of one
amino acid sequence selected from the group consisting of SEQ ID
NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 8, SEQ ID NO: 9, SEQ
ID NO: 10, SEQ ID NO: 11, and SEQ ID NO: 12.
12. The CAR of claim 1, wherein the antigen recognition moiety
comprises the (i) heavy Chain variable region and (ii) light chain
variable region of one amino acid sequence selected from the group
consisting of SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO:
8, SEQ ID NO: 9, SEQ ID NO: 10, SEQ ID NO: 11, and SEQ ID NO:
12.
13. A nucleic acid encoding the CAR of claim 1.
14. The nucleic acid of claim 13, wherein the CAR comprises the
amino acid sequence set forth in SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID
NO: 6, SEQ ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 10, SEQ ID NO: 11, or
SEQ ID NO: 12.
15. The nucleic acid of claim 13, wherein the antigen recognition
moiety of the CAR comprises the (i) heavy chain CDR1, (ii) heavy
Chain CDR2, (iii) heavy chain CDR3, (iv) light chain CDR1, (v)
light chain CDR2, and (vi) light chain CDR3 of one amino acid
sequence selected from the group consisting of SEQ ID NO: 4, SEQ ID
NO: 5, SEQ ID NO: 6, SEQ ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 10, SEQ
ID NO: 11, and SEQ ID NO: 12.
16. The nucleic acid of claim 13, wherein the antigen recognition
moiety of the CAR comprises the (i) heavy chain variable region and
(ii) light chain variable region of one amino acid sequence
selected from the group consisting of SEQ ID NO: 4, SEQ ID NO: 5,
SEQ ID NO: 6, SEQ ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 10, SEQ ID NO:
11, and SEQ ID NO: 12.
17. A vector comprising a nucleic acid sequence encoding the CAR of
claim 1.
18. The vector of claim 17, wherein the antigen recognition moiety
comprises the (i) heavy chain CDR1, (ii) heavy chain CDR2, (iii)
heavy chain CDR3, (iv) light chain CDR1, (v) light chain CDR2, and
(vi) light chain CDR3 of one amino acid sequence selected from the
group consisting of SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ
ID NO: 8, SEQ ID NO: 9, SEQ ID NO: 10, SEQ ID NO: 11, and SEQ ID
NO: 12.
19. An isolated host cell which expresses the CAR of claim 1.
Description
INCORPORATION-BY-REFERENCE OF MATERIAL SUBMITTED ELECTRONICALLY
Incorporated by reference in its entirety herein is a
computer-readable nucleotide/amino acid sequence listing submitted
concurrently herewith and identified as follows: One 42,636 Byte
ASCII (Text) file named "718559_ST25.TXT," dated Sep. 30, 2014.
BACKGROUND OF THE INVENTION
Multiple myeloma (MM) is a malignancy characterized by an
accumulation of clonal plasma cells (see, e.g., Palumbo et al., New
England J. Med., 364(11): 1046-1060 (2011), and Lonial et al.,
Clinical Cancer Res., 17(6): 1264-1277 (2011)). Current therapies
for MM often cause remissions, but nearly all patients eventually
relapse and die (see, e.g., Lonial et al., supra, and Rajkumar,
Nature Rev. Clinical Oncol., 8(8): 479-491 (2011)). Allogeneic
hematopoietic stem cell transplantation has been shown to induce
immune-mediated elimination of myeloma cells; however, the toxicity
of this approach is high, and few patients are cured (see, e.g.,
Lonial et al., supra, and Salit et al., Clin. Lymphoma, Myeloma,
and Leukemia, 11(3): 247-252 (2011)). Currently, there are no
clinically effective, FDA-approved monoclonal antibody or
autologous T-cell therapies for MM (see, e.g., Richardson et al.,
British J. Haematology, 154(6): 745-754 (2011), and Yi, Cancer
Journal, 15(6): 502-510 (2009)).
Adoptive transfer of T-cells genetically modified to recognize
malignancy-associated antigens is showing promise as a new approach
to treating cancer (see, e.g., Morgan et al., Science, 314(5796):
126-129 (2006); Brenner et al., Current Opinion in Immunology,
22(2): 251-257 (2010); Rosenberg et al., Nature Reviews Cancer,
8(4): 299-308 (2008), Kershaw et al., Nature Reviews Immunology,
5(12): 928-940 (2005); and Pule et al., Nature Medicine, 14(11):
1264-1270 (2008)). T-cells can be genetically modified to express
chimeric antigen receptors (CARs), which are fusion proteins
comprised of an antigen recognition moiety and T-cell activation
domains (see, e.g., Kershaw et al., supra, Eshhar et al., Proc.
Natl. Acad. Sci. USA, 90(2): 720-724 (1993), and Sadelain et al.,
Curr. Opin. Immunol., 21(2): 215-223 (2009)).
For B-cell lineage malignancies, extensive progress has been made
in developing adoptive T-cell approaches that utilize anti-CD19
CARs (see, e.g., Jensen et al., Biology of Blood and Marrow
Transplantation, 16: 1245-1256 (2010); Kochenderfer et al., Blood,
116(20): 4099-4102 (2010); Porter et al., The New England Journal
of Medicine, 365(8): 725-733 (2011); Savoldo et al., Journal of
Clinical Investigation, 121(5): 1822-1826 (2011), Cooper et al.,
Blood, 101(4): 1637-1644 (2003); Brentjens et al., Nature Medicine,
9(3): 279-286 (2003); and Kalos et al., Science Translational
Medicine, 3(95): 95ra73 (2011)). Adoptively transferred
anti-CD19-CAR-transduced T-cells have cured leukemia and lymphoma
in mice (see, e.g., Cheadle et al., Journal of Immunology, 184(4):
1885-1896 (2010); Brentjens et al., Clinical Cancer Research, 13(18
Pt 1): 5426-5435 (2007); and Kochenderfer et al., Blood, 116(19):
3875-3886 (2010)). In early clinical trials, adoptively transferred
T-cells transduced with anti-CD19 CARs eradicated normal and
malignant B-cells in patients with leukemia and lymphoma (see,
e.g., Kochenderfer et al., Blood, 116(20): 4099-4102 (2010); Porter
et al., supra, Brentjens et al., Blood, 118(18): 4817-4828 (2011);
and Kochenderfer et al., Blood, Dec. 8, 2011 (epublication ahead of
print (2012)). CD19, however, is only rarely expressed on the
malignant plasma cells of multiple myeloma (see, e.g., Gupta et
al., Amer. J. Clin. Pathology, 132(5): 728-732 (2009); and Lin et
al., Amer. J. Clin. Pathology, 121(4): 482-488 (2004)).
Thus, there remains a need for compositions that can be used in
methods to treat multiple myeloma. This invention provides such
compositions and methods.
BRIEF SUMMARY OF THE INVENTION
The invention provides an isolated or purified nucleic acid
sequence encoding a chimeric antigen receptor (CAR), wherein the
CAR comprises an antigen recognition moiety and a T-cell activation
moiety, and wherein the antigen recognition moiety is directed
against B-cell Maturation Antigen (BCMA).
BRIEF DESCRIPTION OF THE SEVERAL VIEWS OF THE DRAWING(S)
FIGS. 1A and 1B are graphs which depict experimental data
illustrating the expression pattern of BCMA across a variety of
human cell types, as determined using quantitative PCR. The results
are expressed as the number of BCMA cDNA copies per 10.sup.5 actin
cDNA copies.
FIGS. 2A-2L are graphs which depict experimental data illustrating
that cell-surface BCMA expression was detected on multiple myeloma
cell lines, but not on other types of cells, as described in
Example 1. For all plots, the solid line represents staining with
anti-BCMA antibodies, and the dashed line represents staining with
isotype-matched control antibodies. All plots were gated on live
cells.
FIG. 3A is a diagram which depicts a nucleic acid construct
encoding an anti-BCMA CAR. From the N-terminus to the C-terminus,
the anti-BCMA CAR includes an anti-BCMA scFv, the hinge and
transmembrane regions of the CD8.alpha. molecule, the cytoplasmic
portion of the CD28 molecule, and the cytoplasmic portion of the
CD3.zeta. molecule.
FIGS. 3B-3D are graphs which depict experimental data illustrating
that the anti-bcma1 CAR, the anti-bcma2 CAR, and the SP6 CAR
(described in Example 2) are expressed on the surface of T-cells.
Minimal anti-Fab staining occurred on untransduced (UT) cells. The
plots are gated on CD3.sup.+ lymphocytes. The numbers on the plots
are the percentages of cells in each quadrant.
FIGS. 4A-4C are graphs which depict experimental data illustrating
that T-cells expressing anti-BCMA CARs degranulate T-cells in a
BCMA-specific manner, as described Example 3. The plots are gated
on live CD3+ lymphocytes. The numbers on the plots are the
percentages of cells in each quadrant.
FIGS. 5A-5D are graphs which depict experimental data illustrating
that T-cells expressing anti-BCMA CARs degranulate T-cells in a
BCMA-specific manner, as described Example 3. The plots are gated
on live CD3+ lymphocytes. The numbers on the plots are the
percentages of cells in each quadrant.
FIGS. 6A-6C are graphs which depict experimental data illustrating
that T-cells expressing anti-BCMA CARs produce the cytokines
IFN.gamma., IL-2, and TNF in a BCMA-specific manner, as described
Example 3. The plots are gated on live CD3+ lymphocytes. The
numbers on the plots are the percentages of cells in each
quadrant.
FIG. 7A is a graph which depicts experimental data illustrating
that T-cells expressing the anti-bcma2 CAR proliferated
specifically in response to BCMA. FIG. 6B is a graph which depicts
experimental data illustrating that T-cells expressing the SP6 CAR
did not proliferate specifically in response to BCMA.
FIGS. 7C and 7D are graphs which depict experimental data
illustrating that T-cells from Donor A expressing the anti-bcma2
CAR specifically killed the multiple myeloma cell lines H929 (FIG.
6C) and RPMI8226 (FIG. 6D) in a four-hour cytotoxicity assay at
various effector:target cell ratios. T-cells transduced with the
negative control SP6 CAR induced much lower levels of cytotoxicity
at all effector:target ratios. For all effector:target ratios, the
cytotoxicity was determined in duplicate, and the results are
displayed as the mean+/- the standard error of the mean.
FIG. 8A is a graph which depicts experimental data illustrating
that BCMA is expressed on the surface of primary bone marrow
multiple myeloma cells from Myeloma Patient 3, as described in
Example 5. The plot is gated on CD38.sup.high CD56.sup.+ plasma
cells, which made up 40% of the bone marrow cells.
FIG. 8B is a graph which depicts experimental data illustrating
that allogeneic T-cells transduced with the anti-bcma2 CAR from
Donor C produced IFN.gamma. after co-culture with the unmanipulated
bone marrow cells of Myeloma Patient 3, as described in Example 5.
FIG. 7B also illustrates that T-cells from the same allogeneic
donor expressing the anti-bcma2 CAR produced much less IFN.gamma.
when they were cultured with peripheral blood mononuclear cell
(PBMC) from Myeloma Patient 3. In addition, T-cells from Donor C
expressing the SP6 CAR did not specifically recognize the bone
marrow of Myeloma Patient 3.
FIG. 8C is a graph which depicts experimental data illustrating
that a plasmacytoma resected from Myeloma Patient 1 consisted of
93% plasma cells, and these primary plasma cells expressed BCMA, as
revealed by flow cytometry for BCMA (solid line) and
isotype-matched control staining (dashed line). The plot is gated
on plasma cells.
FIG. 8D is a graph which depicts experimental data illustrating
that T-cells from Myeloma Patient 1 expressing the anti-bcma2 CAR
produced IFN.gamma. specifically in response to autologous
plasmacytoma cells.
FIG. 8E s a graph which depicts experimental data illustrating that
T-cells from Myeloma Patient 1 expressing the anti-bcma2 CAR
specifically killed autologous plasmacytoma cells at low effector
to target ratios. In contrast, T-cells from Myeloma Patient 1
expressing the SP6 CAR exhibited low levels of cytotoxicity against
autologous plasmacytoma cells. For all effector:target ratios, the
cytotoxicity was determined in duplicate, and the results are
displayed as the mean+/- the standard error of the mean.
FIG. 9A is a graph which depicts experimental data illustrating
that T-cells transduced with the anti-bcma2 CAR can destroy
established multiple myeloma tumors in mice. FIG. 9B is a graph
which depicts the survival of tumor-bearing mice treated with
T-cells expressing the anti-bcma2 CAR as compared to controls.
DETAILED DESCRIPTION OF THE INVENTION
The invention provides an isolated or purified nucleic acid
sequence encoding a chimeric antigen receptor (CAR), wherein the
CAR comprises an antigen recognition moiety and a T-cell activation
moiety. A chimeric antigen receptor (CAR) is an artificially
constructed hybrid protein or polypeptide containing an antigen
binding domain of an antibody (e.g., a single chain variable
fragment (scFv)) linked to T-cell signaling or T-cell activation
domains. CARs have the ability to redirect T-cell specificity and
reactivity toward a selected target in a non-MHC-restricted manner,
exploiting the antigen-binding properties of monoclonal antibodies.
The non-MHC-restricted antigen recognition gives T-cells expressing
CARs the ability to recognize an antigen independent of antigen
processing, thus bypassing a major mechanism of tumor escape.
Moreover, when expressed in T-cells, CARs advantageously do not
dimerize with endogenous T-cell receptor (TCR) alpha and beta
chains.
"Nucleic acid sequence" is intended to encompass a polymer of DNA
or RNA, i.e., a polynucleotide, which can be single-stranded or
double-stranded and which can contain non-natural or altered
nucleotides. The terms "nucleic acid" and "polynucleotide" as used
herein refer to a polymeric form of nucleotides of any length,
either ribonucleotides (RNA) or deoxyribonucleotides (DNA). These
terms refer to the primary structure of the molecule, and thus
include double- and single-stranded DNA, and double- and
single-stranded RNA. The terms include, as equivalents, analogs of
either RNA or DNA made from nucleotide analogs and modified
polynucleotides such as, though not limited to methylated and/or
capped polynucleotides.
By "isolated" is meant the removal of a nucleic acid from its
natural environment. By "purified" is meant that a given nucleic
acid, whether one that has been removed from nature (including
genomic DNA and mRNA) or synthesized (including cDNA) and/or
amplified under laboratory conditions, has been increased in
purity, wherein "purity" is a relative term, not "absolute purity."
It is to be understood, however, that nucleic acids and proteins
may be formulated with diluents or adjuvants and still for
practical purposes be isolated. For example, nucleic acids
typically are mixed with an acceptable carrier or diluent when used
for introduction into cells.
The inventive nucleic acid sequence encodes a CAR which comprises
an antigen recognition moiety that is directed against B-cell
Maturation Antigen (BCMA, also known as CD269). BCMA is a member of
the tumor necrosis factor receptor superfamily (see, e.g., Thompson
et al., J. Exp. Medicine, 192(1): 129-135 (2000), and Mackay et
al., Annu. Rev. Immunol., 21: 231-264 (2003)). BCMA binds B-cell
activating factor (BAFF) and a proliferation inducing ligand
(APRIL) (see, e.g., Mackay et al., supra, and Kalled et al.,
Immunological Reviews, 204: 43-54 (2005)). Among nonmalignant
cells, BCMA has been reported to be expressed mostly in plasma
cells and subsets of mature B-cells (see, e.g., Laabi et al., EMBO
J., 11(11): 3897-3904 (1992); Laabi et al., Nucleic Acids Res.,
22(7): 1147-1154 (1994); Kalled et al., supra; O'Connor et al., J.
Exp. Medicine, 199(1): 91-97 (2004); and Ng et al., J. Immunol.,
173(2): 807-817 (2004)). Mice deficient in BCMA are healthy and
have normal numbers of B-cells, but the survival of long-lived
plasma cells is impaired (see, e.g., O'Connor et al, supra; Xu et
al., Mol. Cell. Biol., 21(12): 4067-4074 (2001); and Schiemann et
al., Science, 293(5537): 2111-2114 (2001)). BCMA RNA has been
detected universally in multiple myeloma cells, and BCMA protein
has been detected on the surface of plasma cells from multiple
myeloma patients by several investigators (see, e.g., Novak et al.,
Blood, 103(2): 689-694 (2004); Neri et al., Clinical Cancer
Research, 13(19): 5903-5909 (2007); Bellucci et al., Blood,
105(10): 3945-3950 (2005); and Moreaux et al., Blood, 103(8):
3148-3157 (2004)).
The inventive nucleic acid sequence encodes a CAR which comprises
an antigen recognition moiety that contains a monoclonal antibody
directed against BCMA, or an antigen-binding portion thereof. The
term "monoclonal antibodies," as used herein, refers to antibodies
that are produced by a single clone of B-cells and bind to the same
epitope. In contrast, "polyclonal antibodies" refer to a population
of antibodies that are produced by different B-cells and bind to
different epitopes of the same antigen. The antigen recognition
moiety of the CAR encoded by the inventive nucleic acid sequence
can be a whole antibody or an antibody fragment. A whole antibody
typically consists of four polypeptides: two identical copies of a
heavy (H) chain polypeptide and two identical copies of a light (L)
chain polypeptide. Each of the heavy chains contains one N-terminal
variable (VH) region and three C-terminal constant (CH1, CH2 and
CH3) regions, and each light chain contains one N-terminal variable
(VL) region and one C-terminal constant (CL) region. The variable
regions of each pair of light and heavy chains form the antigen
binding site of an antibody. The VH and VL regions have the same
general structure, with each region comprising four framework
regions, whose sequences are relatively conserved. The framework
regions are connected by three complementarity determining regions
(CDRs). The three CDRs, known as CDR1, CDR2, and CDR3, form the
"hypervariable region" of an antibody, which is responsible for
antigen binding.
The terms "fragment of an antibody," "antibody fragment,"
"functional fragment of an antibody," and "antigen-binding portion"
are used interchangeably herein to mean one or more fragments or
portions of an antibody that retain the ability to specifically
bind to an antigen (see, generally, Holliger et al., Nat. Biotech.,
23(9): 1126-1129 (2005)). The antigen recognition moiety of the CAR
encoded by the inventive nucleic acid sequence can contain any
BCMA-binding antibody fragment. The antibody fragment desirably
comprises, for example, one or more CDRs, the variable region (or
portions thereof), the constant region (or portions thereof), or
combinations thereof. Examples of antibody fragments include, but
are not limited to, (i) a Fab fragment, which is a monovalent
fragment consisting of the VL, VH, CL, and CH1 domains; (ii) a
F(ab')2 fragment, which is a bivalent fragment comprising two Fab
fragments linked by a disulfide bridge at the hinge region; (iii) a
Fv fragment consisting of the VL and VH domains of a single arm of
an antibody; (iv) a single chain Fv (scFv), which is a monovalent
molecule consisting of the two domains of the Fv fragment (i.e., VL
and VH) joined by a synthetic linker which enables the two domains
to be synthesized as a single polypeptide chain (see, e.g., Bird et
al., Science, 242: 423-426 (1988); Huston et al., Proc. Natl. Acad.
Sci. USA, 85: 5879-5883 (1988); and Osbourn et al., Nat.
Biotechnol., 16: 778 (1998)) and (v) a diabody, which is a dimer of
polypeptide chains, wherein each polypeptide chain comprises a VH
connected to a VL by a peptide linker that is too short to allow
pairing between the VH and VL on the same polypeptide chain,
thereby driving the pairing between the complementary domains on
different VH-VL polypeptide chains to generate a dimeric molecule
having two functional antigen binding sites. Antibody fragments are
known in the art and are described in more detail in, e.g., U.S.
Patent Application Publication 2009/0093024 A1. In a preferred
embodiment, the antigen recognition moiety of the CAR encoded by
the inventive nucleic acid sequence comprises an anti-BCMA single
chain Fv (scFv).
An antigen-binding portion or fragment of a monoclonal antibody can
be of any size so long as the portion binds to BCMA. In this
respect, an antigen binding portion or fragment of the monoclonal
antibody directed against BCMA (also referred to herein as an
"anti-BCMA monoclonal antibody") desirably comprises between about
5 and 18 amino acids (e.g., about 5, 6, 7, 8, 9, 10, 11, 12, 13,
14, 15, 16, 17, 18, or a range defined by any two of the foregoing
values).
In one embodiment, the inventive nucleic acid sequence encodes an
antigen recognition moiety that comprises a variable region of an
anti-BCMA monoclonal antibody. In this respect, the antigen
recognition moiety comprises a light chain variable region, a heavy
chain variable region, or both a light chain variable region and a
heavy chain variable region of an anti-BCMA monoclonal antibody.
Preferably, the antigen recognition moiety of the CAR encoded by
the inventive nucleic acid sequence comprises a light chain
variable region and a heavy chain variable region of an anti-BCMA
monoclonal antibody. Heavy and light chain monoclonal antibody
amino acid sequences that bind to BCMA are disclosed in, e.g.,
International Patent Application Publication WO 2010/104949.
In another embodiment, the inventive nucleic acid sequence encodes
a CAR which comprises a signal sequence. The signal sequence may be
positioned at the amino terminus of the antigen recognition moiety
(e.g., the variable region of the anti-BCMA antibody). The signal
sequence may comprise any suitable signal sequence. In one
embodiment, the signal sequence is a human granulocyte-macrophage
colony-stimulating factor (GM-CSF) receptor sequence or a
CD8.alpha. signal sequence.
In another embodiment, the CAR comprises a hinge sequence. One of
ordinary skill in the art will appreciate that a hinge sequence is
a short sequence of amino acids that facilitates antibody
flexibility (see, e.g., Woof et al., Nat. Rev. Immunol., 4(2):
89-99 (2004)). The hinge sequence may be positioned between the
antigen recognition moiety (e.g., an anti-BCMA scFv) and the T-cell
activation moiety. The hinge sequence can be any suitable sequence
derived or obtained from any suitable molecule. In one embodiment,
for example, the hinge sequence is derived from the human
CD8.alpha. molecule or a CD28 molecule.
The inventive nucleic acid sequence encodes a CAR comprising a
T-cell activation moiety. The T-cell activation moiety can be any
suitable moiety derived or obtained from any suitable molecule. In
one embodiment, for example, the T-cell activation moiety comprises
a transmembrane domain. The transmembrane domain can be any
transmembrane domain derived or obtained from any molecule known in
the art. For example, the transmembrane domain can be obtained or
derived from a CD8.alpha. molecule or a CD28 molecule. CD8 is a
transmembrane glycoprotein that serves as a co-receptor for the
T-cell receptor (TCR), and is expressed primarily on the surface of
cytotoxic T-cells. The most common form of CD8 exists as a dimer
composed of a CD8.alpha. and CD8.beta. chain. CD28 is expressed on
T-cells and provides co-stimulatory signals required for T-cell
activation. CD28 is the receptor for CD80 (B7.1) and CD86 (B7.2).
In a preferred embodiment, the CD8.alpha. and CD28 are human.
In addition to the transmembrane domain, the T-cell activation
moiety further comprises an intracellular (i.e., cytoplasmic)
T-cell signaling domain. The intercellular T-cell signaling domain
can be obtained or derived from a CD28 molecule, a CD3 zeta
(.zeta.) molecule or modified versions thereof, a human Fc receptor
gamma (FcR.gamma.) chain, a CD27 molecule, an OX40 molecule, a
4-1BB molecule, or other intracellular signaling molecules known in
the art. As discussed above, CD28 is a T-cell marker important in
T-cell co-stimulation. CD3.zeta. associates with TCRs to produce a
signal and contains immunoreceptor tyrosine-based activation motifs
(ITAMs). 4-1BB, also known as CD137, transmits a potent
costimulatory signal to T-cells, promoting differentiation and
enhancing long-term survival of T lymphocytes. In a preferred
embodiment, the CD28, CD3 zeta, 4-1BB, OX40, and CD27 are
human.
The T-cell activation domain of the CAR encoded by the inventive
nucleic acid sequence can comprise any one of aforementioned
transmembrane domains and any one or more of the aforementioned
intercellular T-cell signaling domains in any combination. For
example, the inventive nucleic acid sequence can encode a CAR
comprising a CD28 transmembrane domain and intracellular T-cell
signaling domains of CD28 and CD3 zeta. Alternatively, for example,
the inventive nucleic acid sequence can encode a CAR comprising a
CD8.alpha. transmembrane domain and intracellular T-cell signaling
domains of CD28, CD3 zeta, the Fc receptor gamma (FcR.gamma.)
chain, and/or 4-1BB.
In one embodiment, the inventive nucleic acid sequence encodes a
CAR which comprises, from 5' to 3', a granulocyte-macrophage colony
stimulating factor receptor (GM-CSF receptor) signal sequence, an
anti-BCMA scFv, the hinge and transmembrane regions of the human
CD8.alpha. molecule, the cytoplasmic T-cell signaling domain of the
human CD28 molecule, and T-cell signaling domain of the human
CD3.zeta. molecule. In another embodiment, the inventive nucleic
acid sequence encodes a CAR which comprises, from 5' to 3', a human
CD8.alpha. signal sequence, an anti-BCMA scFv, the hinge and
transmembrane regions of the human CD8.alpha. molecule, the
cytoplasmic T-cell signaling domain of the human CD28 molecule, and
T-cell signaling domain of the human CD3.zeta. molecule. In another
embodiment, the inventive nucleic acid sequence encodes a CAR which
comprises, from 5' to 3', a human CD8.alpha. signal sequence, an
anti-BCMA scFv, the hinge and transmembrane regions of the human
CD8.alpha. molecule, the cytoplasmic T-cell signaling domain of the
human 4-1BB molecule and/or the cytoplasmic T-cell signaling domain
of the human OX40 molecule, and T-cell signaling domain of the
human CD3.zeta. molecule. For example, the inventive nucleic acid
sequence comprises or consists of the nucleic acid sequence of SEQ
ID NO: 1, SEQ ID NO: 2, or SEQ ID NO: 3.
The invention further provides an isolated or purified chimeric
antigen receptor (CAR) encoded by the inventive nucleic acid
sequence.
The nucleic acid sequence of the invention can encode a CAR of any
length, i.e., the CAR can comprise any number of amino acids,
provided that the CAR retains its biological activity, e.g., the
ability to specifically bind to antigen, detect diseased cells in a
mammal, or treat or prevent disease in a mammal, etc. For example,
the CAR can comprise 50 or more (e.g., 60 or more, 100 or more, or
500 or more) amino acids, but less than 1,000 (e.g., 900 or less,
800 or less, 700 or less, or 600 or less) amino acids. Preferably,
the CAR is about 50 to about 700 amino acids (e.g., about 70, about
80, about 90, about 150, about 200, about 300, about 400, about
550, or about 650 amino acids), about 100 to about 500 amino acids
(e.g., about 125, about 175, about 225, about 250, about 275, about
325, about 350, about 375, about 425, about 450, or about 475 amino
acids), or a range defined by any two of the foregoing values.
Included in the scope of the invention are nucleic acid sequences
that encode functional portions of the CAR described herein. The
term "functional portion," when used in reference to a CAR, refers
to any part or fragment of the CAR of the invention, which part or
fragment retains the biological activity of the CAR of which it is
a part (the parent CAR). Functional portions encompass, for
example, those parts of a CAR that retain the ability to recognize
target cells, or detect, treat, or prevent a disease, to a similar
extent, the same extent, or to a higher extent, as the parent CAR.
In reference to a nucleic acid sequence encoding the parent CAR, a
nucleic acid sequence encoding a functional portion of the CAR can
encode a protein comprising, for example, about 10%, 25%, 30%, 50%,
68%, 80%, 90%, 95%, or more, of the parent CAR.
The inventive nucleic acid sequence can encode a functional portion
of a CAR that contains additional amino acids at the amino or
carboxy terminus of the portion, or at both termini, which
additional amino acids are not found in the amino acid sequence of
the parent CAR. Desirably, the additional amino acids do not
interfere with the biological function of the functional portion,
e.g., recognize target cells, detect cancer, treat or prevent
cancer, etc. More desirably, the additional amino acids enhance the
biological activity of the CAR, as compared to the biological
activity of the parent CAR.
The invention also provides nucleic acid sequences encoding
functional variants of the aforementioned CAR. The term "functional
variant," as used herein, refers to a CAR, a polypeptide, or a
protein having substantial or significant sequence identity or
similarity to the CAR encoded by the inventive nucleic acid
sequence, which functional variant retains the biological activity
of the CAR of which it is a variant. Functional variants encompass,
for example, those variants of the CAR described herein (the parent
CAR) that retain the ability to recognize target cells to a similar
extent, the same extent, or to a higher extent, as the parent CAR.
In reference to a nucleic acid sequence encoding the parent CAR, a
nucleic acid sequence encoding a functional variant of the CAR can
be for example, about 10% identical, about 25% identical, about 30%
identical, about 50% identical, about 65% identical, about 80%
identical, about 90% identical, about 95% identical, or about 99%
identical to the nucleic acid sequence encoding the parent CAR.
A functional variant can, for example, comprise the amino acid
sequence of the CAR encoded by the inventive nucleic acid sequence
with at least one conservative amino acid substitution. The phrase
"conservative amino acid substitution" or "conservative mutation"
refers to the replacement of one amino acid by another amino acid
with a common property. A functional way to define common
properties between individual amino acids is to analyze the
normalized frequencies of amino acid changes between corresponding
proteins of homologous organisms (Schulz, G. E. and Schirmer, R.
H., Principles of Protein Structure, Springer-Verlag, New York
(1979)). According to such analyses, groups of amino acids may be
defined where amino acids within a group exchange preferentially
with each other, and therefore resemble each other most in their
impact on the overall protein structure (Schulz, G. E. and
Schirmer, R. H., supra). Examples of conservative mutations include
amino acid substitutions of amino acids within the sub-groups
above, for example, lysine for arginine and vice versa such that a
positive charge may be maintained; glutamic acid for aspartic acid
and vice versa such that a negative charge may be maintained;
serine for threonine such that a free --OH can be maintained; and
glutamine for asparagine such that a free --NH.sub.2 can be
maintained.
Alternatively or additionally, the functional variants can comprise
the amino acid sequence of the parent CAR with at least one
non-conservative amino acid substitution. "Non-conservative
mutations" involve amino acid substitutions between different
groups, for example, lysine for tryptophan, or phenylalanine for
serine, etc. In this case, it is preferable for the
non-conservative amino acid substitution to not interfere with, or
inhibit the biological activity of, the functional variant. The
non-conservative amino acid substitution may enhance the biological
activity of the functional variant, such that the biological
activity of the functional variant is increased as compared to the
parent CAR.
The inventive nucleic acid sequence can encode a CAR (including
functional portions and functional variants thereof) that comprises
synthetic amino acids in place of one or more naturally-occurring
amino acids. Such synthetic amino acids are known in the art, and
include, for example, aminocyclohexane carboxylic acid, norleucine,
.alpha.-amino n-decanoic acid, homoserine,
S-acetylaminomethyl-cysteine, trans-3- and trans-4-hydroxyproline,
4-aminophenylalanine, 4-nitrophenylalanine, 4-chlorophenylalanine,
4-carboxyphenylalanine, .beta.-phenylserine
.beta.-hydroxyphenylalanine, phenylglycine,
.alpha.-naphthylalanine, cyclohexylalanine, cyclohexylglycine,
indoline-2-carboxylic acid,
1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid, aminomalonic
acid, aminomalonic acid monoamide, N'-benzyl-N'-methyl-lysine,
N',N'-dibenzyl-lysine, 6-hydroxylysine, ornithine,
.alpha.-aminocyclopentane carboxylic acid, .alpha.-aminocyclohexane
carboxylic acid, .alpha.-aminocycloheptane carboxylic acid,
.alpha.-(2-amino-2-norbornane)-carboxylic acid,
.alpha.,.gamma.-diaminobutyric acid,
.alpha.,.beta.-diaminopropionic acid, homophenylalanine, and
.alpha.-tert-butylglycine.
The inventive nucleic acid sequence can encode a CAR (including
functional portions and functional variants thereof) which is
glycosylated, amidated, carboxylated, phosphorylated, esterified,
N-acylated, cyclized via, e.g., a disulfide bridge, or converted
into an acid addition salt and/or optionally dimerized or
polymerized, or conjugated.
In a preferred embodiment, the inventive nucleic acid sequence
encodes a CAR that comprises or consists of the amino acid sequence
of SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 8, SEQ ID
NO: 9, SEQ ID NO: 10, SEQ ID NO: 11, or SEQ ID NO: 12.
The inventive nucleic acid sequence can be generated using methods
known in the art. For example, nucleic acid sequences,
polypeptides, and proteins can be recombinantly produced using
standard recombinant DNA methodology (see, e.g., Sambrook et al.,
Molecular Cloning: A Laboratory Manual, 3.sup.rd ed., Cold Spring
Harbor Press, Cold Spring Harbor, N.Y. 2001; and Ausubel et al.,
Current Protocols in Molecular Biology, Greene Publishing
Associates and John Wiley & Sons, NY, 1994). Further, a
synthetically produced nucleic acid sequence encoding the CAR can
be isolated and/or purified from a source, such as a plant, a
bacterium, an insect, or a mammal, e.g., a rat, a human, etc.
Methods of isolation and purification are well-known in the art.
Alternatively, the nucleic acid sequences described herein can be
commercially synthesized. In this respect, the inventive nucleic
acid sequence can be synthetic, recombinant, isolated, and/or
purified.
The invention also provides a vector comprising the nucleic acid
sequence encoding the inventive CAR. The vector can be, for
example, a plasmid, a cosmid, a viral vector (e.g., retroviral or
adenoviral), or a phage. Suitable vectors and methods of vector
preparation are well known in the art (see, e.g., Sambrook et al.,
supra, and Ausubel et al., supra).
In addition to the inventive nucleic acid sequence encoding the
CAR, the vector preferably comprises expression control sequences,
such as promoters, enhancers, polyadenylation signals,
transcription terminators, internal ribosome entry sites (IRES),
and the like, that provide for the expression of the nucleic acid
sequence in a host cell. Exemplary expression control sequences are
known in the art and described in, for example, Goeddel, Gene
Expression Technology: Methods in Enzymology, Vol. 185, Academic
Press, San Diego, Calif. (1990).
A large number of promoters, including constitutive, inducible, and
repressible promoters, from a variety of different sources are well
known in the art. Representative sources of promoters include for
example, virus, mammal, insect, plant, yeast, and bacteria, and
suitable promoters from these sources are readily available, or can
be made synthetically, based on sequences publicly available, for
example, from depositories such as the ATCC as well as other
commercial or individual sources. Promoters can be unidirectional
(i.e., initiate transcription in one direction) or bi-directional
(i.e., initiate transcription in either a 3' or 5' direction).
Non-limiting examples of promoters include, for example, the T7
bacterial expression system, pBAD (araA) bacterial expression
system, the cytomegalovirus (CMV) promoter, the SV40 promoter, and
the RSV promoter. Inducible promoters include, for example, the Tet
system (U.S. Pat. Nos. 5,464,758 and 5,814,618), the Ecdysone
inducible system (No et al., Proc. Natl. Acad. Sci., 93: 3346-3351
(1996)), the T-REX.TM. system (Invitrogen, Carlsbad, Calif.),
LACSWITCH.TM. System (Stratagene, San Diego, Calif.), and the
Cre-ERT tamoxifen inducible recombinase system (Indra et al., Nuc.
Acid. Res., 27: 4324-4327 (1999); Nuc. Acid. Res., 28: e99 (2000);
U.S. Pat. No. 7,112,715; and Kramer & Fussenegger, Methods Mol.
Biol., 308: 123-144 (2005)).
The term "enhancer" as used herein, refers to a DNA sequence that
increases transcription of, for example, a nucleic acid sequence to
which it is operably linked. Enhancers can be located many
kilobases away from the coding region of the nucleic acid sequence
and can mediate the binding of regulatory factors, patterns of DNA
methylation, or changes in DNA structure. A large number of
enhancers from a variety of different sources are well known in the
art and are available as or within cloned polynucleotides (from,
e.g., depositories such as the ATCC as well as other commercial or
individual sources). A number of polynucleotides comprising
promoters (such as the commonly-used CMV promoter) also comprise
enhancer sequences. Enhancers can be located upstream, within, or
downstream of coding sequences. The term "Ig enhancers" refers to
enhancer elements derived from enhancer regions mapped within the
immunoglobulin (Ig) locus (such enhancers include for example, the
heavy chain (mu) 5' enhancers, light chain (kappa) 5' enhancers,
kappa and mu intronic enhancers, and 3' enhancers (see generally
Paul W. E. (ed), Fundamental Immunology, 3rd Edition, Raven Press,
New York (1993), pages 353-363; and U.S. Pat. No. 5,885,827).
The vector also can comprise a "selectable marker gene." The term
"selectable marker gene," as used herein, refers to a nucleic acid
sequence that allows cells expressing the nucleic acid sequence to
be specifically selected for or against, in the presence of a
corresponding selective agent. Suitable selectable marker genes are
known in the art and described in, e.g., International Patent
Application Publications WO 1992/08796 and WO 1994/28143; Wigler et
al., Proc. Natl. Acad. Sci. USA, 77: 3567 (1980); O'Hare et al.,
Proc. Natl. Acad. Sci. USA, 78: 1527 (1981); Mulligan & Berg,
Proc. Natl. Acad. Sci. USA, 78: 2072 (1981); Colberre-Garapin et
al., J. Mol. Biol., 150:1 (1981); Santerre et al., Gene, 30: 147
(1984); Kent et al., Science, 237: 901-903 (1987); Wigler et al.,
Cell, 11: 223 (1977); Szybalska & Szybalski, Proc. Natl. Acad.
Sci. USA, 48: 2026 (1962); Lowy et al., Cell, 22: 817 (1980); and
U.S. Pat. Nos. 5,122,464 and 5,770,359.
In some embodiments, the vector is an "episomal expression vector"
or "episome," which is able to replicate in a host cell, and
persists as an extrachromosomal segment of DNA within the host cell
in the presence of appropriate selective pressure (see, e.g.,
Conese et al., Gene Therapy, 11: 1735-1742 (2004)). Representative
commercially available episomal expression vectors include, but are
not limited to, episomal plasmids that utilize Epstein Barr Nuclear
Antigen 1 (EBNA1) and the Epstein Barr Virus (EBV) origin of
replication (oriP). The vectors pREP4, pCEP4, pREP7, and pcDNA3.1
from Invitrogen (Carlsbad, Calif.) and pBK-CMV from Stratagene (La
Jolla, Calif.) represent non-limiting examples of an episomal
vector that uses T-antigen and the SV40 origin of replication in
lieu of EBNA1 and oriP.
Other suitable vectors include integrating expression vectors,
which may randomly integrate into the host cell's DNA, or may
include a recombination site to enable the specific recombination
between the expression vector and the host cell's chromosome. Such
integrating expression vectors may utilize the endogenous
expression control sequences of the host cell's chromosomes to
effect expression of the desired protein. Examples of vectors that
integrate in a site specific manner include, for example,
components of the flp-in system from Invitrogen (Carlsbad, Calif.)
(e.g., pcDNA.TM.5/FRT), or the cre-lox system, such as can be found
in the pExchange-6 Core Vectors from Stratagene (La Jolla, Calif.).
Examples of vectors that randomly integrate into host cell
chromosomes include, for example, pcDNA3.1 (when introduced in the
absence of T-antigen) from Invitrogen (Carlsbad, Calif.), and pCI
or pFN10A (ACT) FLEXI.TM. from Promega (Madison, Wis.).
Viral vectors also can be used. Representative viral expression
vectors include, but are not limited to, the adenovirus-based
vectors (e.g., the adenovirus-based Per.C6 system available from
Crucell, Inc. (Leiden, The Netherlands)), lentivirus-based vectors
(e.g., the lentiviral-based pLPI from Life Technologies (Carlsbad,
Calif.)), and retroviral vectors (e.g., the pFB-ERV plus pCFB-EGSH
from Stratagene (La Jolla, Calif.)). In a preferred embodiment, the
viral vector is a lentivirus vector.
The vector comprising the inventive nucleic acid encoding the CAR
can be introduced into a host cell that is capable of expressing
the CAR encoded thereby, including any suitable prokaryotic or
eukaryotic cell. Preferred host cells are those that can be easily
and reliably grown, have reasonably fast growth rates, have well
characterized expression systems, and can be transformed or
transfected easily and efficiently.
As used herein, the term "host cell" refers to any type of cell
that can contain the expression vector. The host cell can be a
eukaryotic cell, e.g., plant, animal, fungi, or algae, or can be a
prokaryotic cell, e.g., bacteria or protozoa. The host cell can be
a cultured cell or a primary cell, i.e., isolated directly from an
organism, e.g., a human. The host cell can be an adherent cell or a
suspended cell, i.e., a cell that grows in suspension. Suitable
host cells are known in the art and include, for instance,
DH5.alpha. E. coli cells, Chinese hamster ovarian cells, monkey
VERO cells, COS cells, HEK293 cells, and the like. For purposes of
amplifying or replicating the recombinant expression vector, the
host cell may be a prokaryotic cell, e.g., a DH5.alpha. cell. For
purposes of producing a recombinant CAR, the host cell can be a
mammalian cell. The host cell preferably is a human cell. The host
cell can be of any cell type, can originate from any type of
tissue, and can be of any developmental stage. In one embodiment,
the host cell can be a peripheral blood lymphocyte (PBL), a
peripheral blood mononuclear cell (PBMC), or a natural killer (NK).
Preferably, the host cell is a natural killer (NK) cell. More
preferably, the host cell is a T-cell. Methods for selecting
suitable mammalian host cells and methods for transformation,
culture, amplification, screening, and purification of cells are
known in the art.
The invention provides an isolated host cell which expresses the
inventive nucleic acid sequence encoding the CAR described herein.
In one embodiment, the host cell is a T-cell. The T-cell of the
invention can be any T-cell, such as a cultured T-cell, e.g., a
primary T-cell, or a T-cell from a cultured T-cell line, or a
T-cell obtained from a mammal. If obtained from a mammal, the
T-cell can be obtained from numerous sources, including but not
limited to blood, bone marrow, lymph node, the thymus, or other
tissues or fluids. T-cells can also be enriched for or purified.
The T-cell preferably is a human T-cell (e.g., isolated from a
human). The T-cell can be of any developmental stage, including but
not limited to, a CD4.sup.+/CD8.sup.+ double positive T-cell, a
CD4.sup.+ helper T-cell, e.g., Th.sub.1 and Th.sub.e cells, a
CD8.sup.+ T-cell (e.g., a cytotoxic T-cell), a tumor infiltrating
cell, a memory T-cell, a naive T-cell, and the like. In one
embodiment, the T-cell is a CD8.sup.+ T-cell or a CD4.sup.+ T-cell.
T-cell lines are available from, e.g., the American Type Culture
Collection (ATCC, Manassas, Va.), and the German Collection of
Microorganisms and Cell Cultures (DSMZ) and include, for example,
Jurkat cells (ATCC TIB-152), Sup-T1 cells (ATCC CRL-1942), RPMI
8402 cells (DSMZ ACC-290), Karpas 45 cells (DSMZ ACC-545), and
derivatives thereof.
In another embodiment, the host cell is a natural killer (NK) cell.
NK cells are a type of cytotoxic lymphocyte that plays a role in
the innate immune system. NK cells are defined as large granular
lymphocytes and constitute the third kind of cells differentiated
from the common lymphoid progenitor which also gives rise to B and
T lymphocytes (see, e.g., Immunobiology, 5.sup.th ed., Janeway et
al., eds., Garland Publishing, New York, N.Y. (2001)). NK cells
differentiate and mature in the bone marrow, lymph node, spleen,
tonsils, and thymus. Following maturation, NK cells enter into the
circulation as large lymphocytes with distinctive cytotoxic
granules. NK cells are able to recognize and kill some abnormal
cells, such as, for example, some tumor cells and virus-infected
cells, and are thought to be important in the innate immune defense
against intracellular pathogens. As described above with respect to
T-cells, the NK cell can be any NK cell, such as a cultured NK
cell, e.g., a primary NK cell, or an NK cell from a cultured NK
cell line, or an NK cell obtained from a mammal. If obtained from a
mammal, the NK cell can be obtained from numerous sources,
including but not limited to blood, bone marrow, lymph node, the
thymus, or other tissues or fluids. NK cells can also be enriched
for or purified. The NK cell preferably is a human NK cell (e.g.,
isolated from a human). NK cell lines are available from, e.g., the
American Type Culture Collection (ATCC, Manassas, Va.) and include,
for example, NK-92 cells (ATCC CRL-2407), NK92MI cells (ATCC
CRL-2408), and derivatives thereof.
The inventive nucleic acid sequence encoding a CAR may be
introduced into a cell by "transfection," "transformation," or
"transduction." "Transfection," "transformation," or
"transduction," as used herein, refer to the introduction of one or
more exogenous polynucleotides into a host cell by using physical
or chemical methods. Many transfection techniques are known in the
art and include, for example, calcium phosphate DNA
co-precipitation (see, e.g., Murray E. J. (ed.), Methods in
Molecular Biology, Vol. 7, Gene Transfer and Expression Protocols,
Humana Press (1991)); DEAE-dextran; electroporation; cationic
liposome-mediated transfection; tungsten particle-facilitated
microparticle bombardment (Johnston, Nature, 346: 776-777 (1990));
and strontium phosphate DNA co-precipitation (Brash et al., Mol.
Cell Biol., 7: 2031-2034 (1987)). Phage or viral vectors can be
introduced into host cells, after growth of infectious particles in
suitable packaging cells, many of which are commercially
available.
Without being bound to a particular theory or mechanism, it is
believed that by eliciting an antigen-specific response against
BCMA, the CARs encoded by the inventive nucleic acid sequence
provide for one or more of the following: targeting and destroying
BCMA-expressing cancer cells, reducing or eliminating cancer cells,
facilitating infiltration of immune cells to tumor site(s), and
enhancing/extending anti-cancer responses. Thus, the invention
provides a method of destroying multiple myeloma cells, which
comprises contacting one or more of the aforementioned isolated
T-cells or natural killer cells with a population of multiple
myeloma cells that express BCMA, whereby the CAR is produced and
binds to BCMA on the multiple myeloma cells and the multiple
myeloma cells are destroyed. As discussed herein, multiple myeloma,
also known as plasma cell myeloma or Kahler's disease, is a cancer
of plasma cells, which are a type of white blood cell normally
responsible for the production of antibodies (Raab et al., Lancet,
374: 324-329 (2009)). Multiple myeloma affects 1-4 per 100,000
people per year. The disease is more common in men, and for yet
unknown reasons is twice as common in African Americans as it is in
Caucasian Americans. Multiple myeloma is the least common
hematological malignancy (14%) and constitutes 1% of all cancers
(Raab et al., supra). Treatment of multiple myeloma typically
involves high-dose chemotherapy followed by hematopoietic stem cell
transplanatation (allogenic or autologous); however, a high rate of
relapse is common in multiple myeloma patients that have undergone
such treatment. As discussed above, BCMA is highly expressed by
multiple myeloma cells (see, e.g., Novak et al., supra; Neri et
al., supra; Bellucci et al., supra; and Moreaux et al., supra).
One or more isolated T-cells expressing the inventive nucleic acid
sequence encoding the anti-BCMA CAR described herein can be
contacted with a population of multiple myeloma cells that express
BCMA ex vivo, in vivo, or in vitro. "Ex vivo" refers to methods
conducted within or on cells or tissue in an artificial environment
outside an organism with minimum alteration of natural conditions.
In contrast, the term "in vivo" refers to a method that is
conducted within living organisms in their normal, intact state,
while an "in vitro" method is conducted using components of an
organism that have been isolated from its usual biological context.
The inventive method preferably involves ex vivo and in vivo
components. In this regard, for example, the isolated T-cells
described above can be cultured ex vivo under conditions to express
the inventive nucleic acid sequence encoding the anti-BCMA CAR, and
then directly transferred into a mammal (preferably a human)
affected by multiple myeloma. Such a cell transfer method is
referred to in the art as "adoptive cell transfer (ACT)," in which
immune-derived cells are passively transferred into a new recipient
host to transfer the functionality of the donor immune-derived
cells to the new host. Adoptive cell transfer methods to treat
various types of cancers, including hematological cancers such as
myeloma, are known in the art and disclosed in, for example,
Gattinoni et al., Nat. Rev. Immunol., 6(5): 383-393 (2006); June, C
H, J. Clin. Invest., 117(6): 1466-76 (2007); Rapoport et al.,
Blood, 117(3): 788-797 (2011); and Barber et al., Gene Therapy, 18:
509-516 (2011)).
The invention also provides a method of destroying Hodgkin's
lymphoma cells. Hodgkin's lymphoma (formerly known as Hodgkin's
disease) is a cancer of the immune system that is marked by the
presence of a multinucleated cell type called Reed-Sternberg cells.
The two major types of Hodgkin's lymphoma include classical
Hodgkin's lymphoma and nodular lymphocyte-predominant Hodgkin's
lymphoma. Hodgkin's lymphoma currently is treated with radiation
therapy, chemotherapy, or hematopoietic stem cell transplantation,
with the choice of treatment depending on the age and sex of the
patient and the stage, bulk, and histological subtype of the
disease. BCMA expression has been detected on the surface of
Hodgkin's lymphoma cells (see, e.g., Chiu et al., Blood, 109(2):
729-739 (2007)).
When T-cells or NK cells are administered to a mammal, the cells
can be allogeneic or autologous to the mammal. In "autologous"
administration methods, cells (e.g., blood-forming stem cells or
lymphocytes) are removed from a mammal, stored (and optionally
modified), and returned back to the same mammal. In "allogeneic"
administration methods, a mammal receives cells (e.g.,
blood-forming stem cells or lymphocytes) from a genetically
similar, but not identical, donor. Preferably, the cells are
autologous to the mammal.
The T-cells or NK cells desirably are administered to a human in
the form of a composition, such as a pharmaceutical composition.
Alternatively, the inventive nucleic acid sequence encoding the
CAR, or a vector comprising the CAR-encoding nucleic acid sequence,
can be formulated into a composition, such as a pharmaceutical
composition, and administered to a human. The inventive
pharmaceutical composition can comprise a population of T-cells of
NK cells that express the inventive CAR. In addition to the
inventive nucleic acid sequence, or host cells which express the
inventive CAR, the pharmaceutical composition can comprise other
pharmaceutically active agents or drugs, such as chemotherapeutic
agents, e.g., asparaginase, busulfan, carboplatin, cisplatin,
daunorubicin, doxorubicin, fluorouracil, gemcitabine, hydroxyurea,
methotrexate, paclitaxel, rituximab, vinblastine, vincristine, etc.
In a preferred embodiment, the pharmaceutical composition comprises
an isolated T-cell or NK cell which expresses the inventive CAR,
more preferably a population of T-cells or NK cells which express
the inventive CAR.
The inventive T-cells or NK cells can be provided in the form of a
salt, e.g., a pharmaceutically acceptable salt. Suitable
pharmaceutically acceptable acid addition salts include those
derived from mineral acids, such as hydrochloric, hydrobromic,
phosphoric, metaphosphoric, nitric, and sulphuric acids, and
organic acids, such as tartaric, acetic, citric, malic, lactic,
fumaric, benzoic, glycolic, gluconic, succinic, and arylsulphonic
acids, for example, p-toluenesulphonic acid.
The choice of carrier will be determined in part by the particular
inventive nucleic acid sequence, vector, or host cells expressing
the CAR, as well as by the particular method used to administer the
inventive nucleic acid sequence, vector, or host cells expressing
the CAR. Accordingly, there are a variety of suitable formulations
of the pharmaceutical composition of the invention. For example,
the pharmaceutical composition can contain preservatives. Suitable
preservatives may include, for example, methylparaben,
propylparaben, sodium benzoate, and benzalkonium chloride. A
mixture of two or more preservatives optionally may be used. The
preservative or mixtures thereof are typically present in an amount
of about 0.0001% to about 2% by weight of the total
composition.
In addition, buffering agents may be used in the composition.
Suitable buffering agents include, for example, citric acid, sodium
citrate, phosphoric acid, potassium phosphate, and various other
acids and salts. A mixture of two or more buffering agents
optionally may be used. The buffering agent or mixtures thereof are
typically present in an amount of about 0.001% to about 4% by
weight of the total composition.
Methods for preparing administrable (e.g., parenterally
administrable) compositions are known to those skilled in the art
and are described in more detail in, for example, Remington: The
Science and Practice of Pharmacy, Lippincott Williams &
Wilkins; 21st ed. (May 1, 2005).
The composition comprising the inventive nucleic acid sequence
encoding the CAR, or host cells expressing the CAR, can be
formulated as an inclusion complex, such as cyclodextrin inclusion
complex, or as a liposome. Liposomes can serve to target the host
cells (e.g., T-cells or NK cells) or the inventive nucleic acid
sequence to a particular tissue. Liposomes also can be used to
increase the half-life of the inventive nucleic acid sequence. Many
methods are available for preparing liposomes, such as those
described in, for example, Szoka et al., Ann. Rev. Biophys.
Bioeng., 9: 467 (1980), and U.S. Pat. Nos. 4,235,871, 4,501,728,
4,837,028, and 5,019,369.
The composition can employ time-released, delayed release, and
sustained release delivery systems such that the delivery of the
inventive composition occurs prior to, and with sufficient time to
cause, sensitization of the site to be treated. Many types of
release delivery systems are available and known to those of
ordinary skill in the art. Such systems can avoid repeated
administrations of the composition, thereby increasing convenience
to the subject and the physician, and may be particularly suitable
for certain composition embodiments of the invention.
The composition desirably comprises the host cells expressing the
inventive nucleic acid sequence encoding a CAR, or a vector
comprising the inventive nucleic acid sequence, in an amount that
is effective to treat or prevent multiple myeloma or Hodgkin's
lymphoma. As used herein, the tennis "treatment," "treating," and
the like refer to obtaining a desired pharmacologic and/or
physiologic effect. Preferably, the effect is therapeutic, i.e.,
the effect partially or completely cures a disease and/or adverse
symptom attributable to the disease. To this end, the inventive
method comprises administering a "therapeutically effective amount"
of the composition comprising the host cells expressing the
inventive nucleic acid sequence encoding a CAR, or a vector
comprising the inventive nucleic acid sequence. A "therapeutically
effective amount" refers to an amount effective, at dosages and for
periods of time necessary, to achieve a desired therapeutic result.
The therapeutically effective amount may vary according to factors
such as the disease state, age, sex, and weight of the individual,
and the ability of the CAR to elicit a desired response in the
individual. For example, a therapeutically effective amount of CAR
of the invention is an amount which binds to BCMA on multiple
myeloma cells and destroys them.
Alternatively, the pharmacologic and/or physiologic effect may be
prophylactic, i.e., the effect completely or partially prevents a
disease or symptom thereof. In this respect, the inventive method
comprises administering a "prophylactically effective amount" of
the composition comprising the host cells expressing the inventive
nucleic acid sequence encoding a CAR, or a vector comprising the
inventive nucleic acid sequence, to a mammal that is predisposed to
multiple myeloma or Hodgkin's lymphoma. A "prophylactically
effective amount" refers to an amount effective, at dosages and for
periods of time necessary, to achieve a desired prophylactic result
(e.g., prevention of disease onset).
A typical amount of host cells administered to a mammal (e.g., a
human) can be, for example, in the range of one million to 100
billion cells; however, amounts below or above this exemplary range
are within the scope of the invention. For example, the daily dose
of inventive host cells can be about 1 million to about 50 billion
cells (e.g., about 5 million cells, about 25 million cells, about
500 million cells, about 1 billion cells, about 5 billion cells,
about 20 billion cells, about 30 billion cells, about 40 billion
cells, or a range defined by any two of the foregoing values),
preferably about 10 million to about 100 billion cells (e.g., about
20 million cells, about 30 million cells, about 40 million cells,
about 60 million cells, about 70 million cells, about 80 million
cells, about 90 million cells, about 10 billion cells, about 25
billion cells, about 50 billion cells, about 75 billion cells,
about 90 billion cells, or a range defined by any two of the
foregoing values), more preferably about 100 million cells to about
50 billion cells (e.g., about 120 million cells, about 250 million
cells, about 350 million cells, about 450 million cells, about 650
million cells, about 800 million cells, about 900 million cells,
about 3 billion cells, about 30 billion cells, about 45 billion
cells, or a range defined by any two of the foregoing values).
Therapeutic or prophylactic efficacy can be monitored by periodic
assessment of treated patients. For repeated administrations over
several days or longer, depending on the condition, the treatment
is repeated until a desired suppression of disease symptoms occurs.
However, other dosage regimens may be useful and are within the
scope of the invention. The desired dosage can be delivered by a
single bolus administration of the composition, by multiple bolus
administrations of the composition, or by continuous infusion
administration of the composition.
The composition comprising the host cells expressing the inventive
CAR-encoding nucleic acid sequence, or a vector comprising the
inventive CAR-encoding nucleic acid sequence, can be administered
to a mammal using standard administration techniques, including
oral, intravenous, intraperitoneal, subcutaneous, pulmonary,
transdermal, intramuscular, intranasal, buccal, sublingual, or
suppository administration. The composition preferably is suitable
for parenteral administration. The term "parenteral," as used
herein, includes intravenous, intramuscular, subcutaneous, rectal,
vaginal, and intraperitoneal administration. More preferably, the
composition is administered to a mammal using peripheral systemic
delivery by intravenous, intraperitoneal, or subcutaneous
injection.
The composition comprising the host cells expressing the inventive
CAR-encoding nucleic acid sequence, or a vector comprising the
inventive CAR-encoding nucleic acid sequence, can be administered
with one or more additional therapeutic agents, which can be
coadministered to the mammal. By "coadministering" is meant
administering one or more additional therapeutic agents and the
composition comprising the inventive host cells or the inventive
vector sufficiently close in time such that the inventive CAR can
enhance the effect of one or more additional therapeutic agents, or
vice versa. In this regard, the composition comprising the
inventive host cells or the inventive vector can be administered
first, and the one or more additional therapeutic agents can be
administered second, or vice versa. Alternatively, the composition
comprising the inventive host cells or the inventive vector and the
one or more additional therapeutic agents can be administered
simultaneously. An example of a therapeutic agent that can be
co-administered with the composition comprising the inventive host
cells or the inventive vector is IL-2.
Once the composition comprising host cells expressing the inventive
CAR-encoding nucleic acid sequence, or a vector comprising the
inventive CAR-encoding nucleic acid sequence, is administered to a
mammal (e.g., a human), the biological activity of the CAR can be
measured by any suitable method known in the art. In accordance
with the inventive method, the CAR binds to BCMA on the multiple
myeloma cells, and the multiple myeloma cells are destroyed.
Binding of the CAR to BCMA on the surface of multiple myeloma cells
can be assayed using any suitable method known in the art,
including, for example, ELISA and flow cytometry. The ability of
the CAR to destroy multiple myeloma cells can be measured using any
suitable method known in the art, such as cytotoxicity assays
described in, for example, Kochenderfer et al., J. Immunotherapy,
32(7): 689-702 (2009), and Herman et al. J. Immunological Methods,
285(1): 25-40 (2004). The biological activity of the CAR also can
be measured by assaying expression of certain cytokines, such as
CD107a, IFN.gamma., IL-2, and TNF.
One of ordinary skill in the art will readily appreciate that the
inventive CAR-encoding nucleic acid sequence can be modified in any
number of ways, such that the therapeutic or prophylactic efficacy
of the CAR is increased through the modification. For instance, the
CAR can be conjugated either directly or indirectly through a
linker to a targeting moiety. The practice of conjugating
compounds, e.g., the CAR, to targeting moieties is known in the
art. See, for instance, Wadwa et al., J. Drug Targeting 3: 111
(1995), and U.S. Pat. No. 5,087,616.
The following examples further illustrate the invention but, of
course, should not be construed as in any way limiting its
scope.
Example 1
This example demonstrates the expression pattern of BCMA in human
cells.
Quantitative polymerase chain reaction (qPCR) was performed on a
panel of cDNA samples from a wide range of normal tissues included
in the Human Major Tissue qPCR panel II (Origine Technologies,
Rockville, Md.) using a BCMA-specific primer and probe set (Life
Technologies, Carlsbad, Calif.). cDNA from cells of a plasmacytoma
that was resected from a patient with advanced multiple myeloma was
analyzed as a positive control. RNA was extracted from the
plasmacytoma cells with an RNeasy mini kit (Qiagen, Inc., Valencia,
Calif.), and cDNA was synthesized using standard methods. A
standard curve for the BCMA qPCR was created by diluting a plasmid
that encoded the full-length BCMA cDNA (Origine Technologies,
Rockville, Md.) in carrier DNA. The qPCR accurately detected copy
numbers from 10.sup.2 to 10.sup.9 copies of BCMA per reaction. The
number of .beta.-actin cDNA copies in the same tissues was
quantitated with a Taqman .beta.-actin primer and probe kit (Life
Technologies, Carlsbad, Calif.). A .beta.-actin standard curve was
created by amplifying serial dilutions of a .beta.-actin plasmid.
All qPCR reactions were carried out on the Roche LightCycler480
machine (Roche Applied Sciences, Indianapolis, Ind.).
The results of the qPCR analysis are depicted in FIGS. 1A and 1B.
93% percent of the cells from the plasmacytoma sample were plasma
cells as determined by flow cytometry. BCMA expression in the
plasmacytoma sample was dramatically higher than BCMA expression in
any other tissue. BCMA cDNA was detected in several hematologic
tissues, such as peripheral blood mononuclear cells (PBMC), bone
marrow, spleen, lymph node, and tonsil. Low levels of BCMA cDNA
were detected in most gastrointestinal organs, such as duodenum,
rectum, and stomach. BCMA expression in gastrointestinal organs may
be the result of plasma cells and B-cells present in gut-associated
lymphoid tissues such as the lamina propria and Peyer's Patches
(see, e.g., Brandtzaeg, Immunological Investigations, 39(4-5):
303-355 (2010)). Low levels of BCMA cDNA also were detected in the
testis and the trachea. The low levels of BCMA cDNA detected in the
trachea may be due to the presence of plasma cells in the lamina
propria of the trachea (see, e.g., Soutar, Thorax, 31(2):158-166
(1976)).
The expression of BCMA on the surface of various cell types was
further characterized using flow cytometry (see FIGS. 2A-2L),
including multiple myeloma cell lines H929, U266, and RPMI8226. The
multiple myeloma cell lines H929, U266, and RPMI8226 all expressed
cell surface BCMA. In contrast, the sarcoma cell line TC71, the
T-cell leukemia line CCRF-CEM, and the kidney cell line 293T-17 did
not express cell surface BCMA. Primary CD34.sup.+ hematopoietic
cells, primary small airway epithelial cells, primary bronchial
epithelial cells, and primary intestinal epithelial cells all
lacked cell surface BCMA expression.
The results of this example demonstrate that BCMA is expressed on
the surface of multiple myeloma cells, and it has a restricted
expression pattern in normal tissues.
Example 2
This example describes the construction of the inventive nucleic
acid sequence encoding anti-BCMA chimeric antigen receptors
(CARs).
Antibody sequences of two mouse-anti-human-BCMA antibodies
designated as "C12A3.2" and "C11D5.3" were obtained from
International Patent Application Publication WO 2010/104949 (Kalled
et al.). The amino acid sequences of the heavy chain variable
regions and light chain variable regions of these antibodies were
used to design single chain variable fragments (scFvs) having the
following general structure:
light chain variable region-linker-heavy chain variable region.
The linker had the following amino acid sequence:
GSTSGSGKPGSGEGSTKG (SEQ ID NO: 7) (see, e.g., Cooper et al., Blood,
101(4): 1637-1644 (2003)).
DNA sequences encoding two chimeric antigen receptors were
designed, each of which contained the following elements from 5' to
3': the CD8.alpha. signal sequence, the aforementioned anti-BCMA
scFv, hinge and transmembrane regions of the human CD8.alpha.
molecule, the cytoplasmic portion of the CD28 molecule, and the
cytoplasmic portion of the CD3.zeta. molecule. A schematic of these
CAR-encoding nucleic acid sequences is set forth in FIG. 3A. The
CARs incorporating variable regions from C12A3.2 and C11D5.3 were
designated anti-bcma1 and anti-bcma2, respectively.
DNA sequences encoding five additional chimeric antigen receptors
based on the above-described anti-bcma2 CAR were designed, each of
which contained different signal sequences and T-cell activation
domains. In this respect, 8ss-anti-bcma2 CAR contained the
following elements from 5' to 3: the CD8.alpha. signal sequence,
scFv, hinge and transmembrane regions of the human CD8.alpha.
molecule, the cytoplasmic portion of the CD28 molecule, and the
cytoplasmic portion of the CD3.zeta. molecule. The G-anti-bcma2 CAR
contained the following elements from 5' to 3': the human GM-CSF
receptor signal sequence, scFv, hinge and transmembrane regions of
the human CD8.alpha. molecule, the cytoplasmic portion of the CD28
molecule, and the cytoplasmic portion of the CD3.zeta. molecule.
The anti-bcma2-BB CAR contained the following elements from 5' to
3': the CD8.alpha. signal sequence, scFv, hinge and transmembrane
regions of the human CD8.alpha. molecule, the cytoplasmic portion
of the 4-1BB molecule, and the cytoplasmic portion of the CD3.zeta.
molecule. The anti-bcma2-OX40 CAR contained the following elements
from 5' to 3': the CD8.alpha. signal sequence, scFv, hinge and
transmembrane regions of the human CD8.alpha. molecule, the
cytoplasmic portion of the OX40 molecule (see, e.g., Latza et al.,
European Journal of Immunology, 24: 677-683 (1994)), and the
cytoplasmic portion of the CD3.zeta. molecule. The
anti-bcma2-BBOX40 contained the following elements from 5' to 3':
the CD8.alpha. signal sequence, scFv, hinge and transmembrane
regions of the human CD8.alpha. molecule, the cytoplasmic portion
of the 4-1BB molecule, the cytoplasmic region of the OX40 molecule,
and the cytoplasmic portion of the CD3.zeta. molecule. The elements
present in each of the seven CAR sequences are set forth in Table
1.
TABLE-US-00001 TABLE 1 Intra- SEQ ID Hinge and cellular NO Trans-
T-cell (amino Signal membrane Signaling CAR acid) Sequence Regions
Domain anti-bcma1 4 Human CD8.alpha. Human CD8.alpha. CD28
CD3.zeta. anti-bcma2 5 Human CD8.alpha. Human CD8.alpha. CD28
CD3.zeta. G-Anti-bcma2 8 GM-CSF Human CD8.alpha. CD28 receptor
CD3.zeta. 8ss-anti-bcma2 9 Human CD8.alpha. Human CD8.alpha. CD28
CD3.zeta. anti-bcma2-BB 10 Human CD8.alpha. Human CD8.alpha. 4-1BB
CD3.zeta. anti-bcma2- 11 Human CD8.alpha. Human CD8.alpha. OX40
OX40 CD3.zeta. anti-bcma2- 12 Human CD8.alpha. Human CD8.alpha.
4-1BB BBOX40 OX40 CD3.zeta.
The sequences used for CD8.alpha., CD28, CD3.zeta., 4-1BB (CD137),
and OX40 (CD134) were obtained from the publicly available National
Center for Biotechnology Information (NCBI) database.
The CAR-encoding nucleic acid sequences were generated using
methods known in the art, such as those described in, for example,
Kochenderfer et al., J. Immunology, 32(7): 689-702 (2009), and Zhao
et al., J. Immunology, 183(9): 5563-5574 (2009). The nucleic acid
sequence encoding each CAR was codon optimized and synthesized
using GeneArt.TM. technology (Life Technologies, Carlsbad, Calif.)
with appropriate restriction sites.
The sequences encoding the anti-bcma1 and anti-bcma2 CARs were
ligated into a lentiviral vector plasmid designated
pRRLSIN.cPPT.MSCV.coDMF5.0PRE (see, e.g., Yang et al., J.
Immunotherapy, 33(6): 648-658 (2010)). The coDMF5 portion of this
vector was replaced with the CAR-encoding nucleic acid sequences
using standard methods. The two resulting anti-BCMA CAR vectors
were denoted pRRLSIN.cPPT.MSCV.anti-bcma1.oPRE and
pRRLSIN.cPPT.MSCV.anti-bcma2.0PRE. A negative-control CAR
containing the SP6 scFv that recognizes the hapten
2,4,6-trinitrophenyl also was constructed (see, e.g., Gross et al.,
Proc. Natl. Acad. Sci. USA, 86(24): 10024-10028 (1989)). This CAR
was referred to as SP6. The SP6 CAR was cloned into the same
lentiviral vector as the anti-BCMA CARs and contained the same
signaling domains as anti-bcma1 and anti-bcma2. Supernatant
containing lentiviruses encoding each CAR was produced by the
protocol described in Yang et al., supra. Specifically, 293T-17
cells (ATCC CRL-11268) were transfected with the following
plasmids: pMDG (encoding the vesicular stomatitis virus envelope
protein), pMDLg/pRRE (encoding HIV Gag and Pol proteins), pRSV-Rev
(encoding RSV Rev protein), and plasmids encoding the anti-bcma
CARs (see, e.g., Yang et al., supra).
The sequences encoding the G-anti-bcma2, 8ss-anti-bcma2,
anti-bcma2-BB, anti-bcma2-OX40, and anti-bcma2-BBOX40 CARs were
each ligated into a gammaretroviral vector plasmid designated MSGV
(mouse stem cell virus-based splice-gag vector) using standard
methods, such as those described in, e.g., Hughes et al., Human
Gene Therapy, 16: 457-472 (2005). After the CAR-encoding
gammaretroviral plasmids were generated, replication incompetent
retroviruses with the RD114 envelope were produced by transient
transfection of 293-based packaging cells as described in
Kochenderfer et al., J. Immunotherapy, 32(7): 689-702 (2009).
The replication-incompetent lentiviruses and retroviruses encoding
the above-described CARs were used to transduce human T-cells. For
anti-bcma1 and anti-bcma2, T-cells were cultured as described
previously (see, e.g., Kochenderfer et al., J. Immunotherapy,
32(7): 689-702 (2009)) and were stimulated with the anti-CD3
monoclonal antibody OKT3 (Ortho-Biotech, Horsham, Pa.) in AIM V.TM.
medium (Life Technologies, Carlsbad, Calif.) containing 5% human AB
serum (Valley Biomedical, Winchester, Va.) and 300 international
units (IU)/mL of interleukin-2 (Novartis Diagnostics, Emeryville,
Calif.). Thirty-six hours after the cultures were started, the
activated T-cells were suspended in lentiviral supernatant with
protamine sulfate and 300 IU/mL IL-2. The cells were centrifuged
for 1 hour at 1200.times.g. The T-cells were then cultured for
three hours at 37.degree. C. The supernatant was then diluted 1:1
with RPMI medium (Mediatech, Inc., Manassas, Va.)+10% fetal bovine
serum (Life Technologies, Carlsbad, Calif.) and IL-2. The T-cells
were cultured in the diluted supernatant overnight, and then
returned to culture in AIM V.TM. medium (Life Technologies,
Carlsbad, Calif.) plus 5% human AB serum with IL-2. T-cells were
stained with biotin-labeled polyclonal goat anti-mouse-F(ab).sub.2
antibodies (Jackson Immunoresearch Laboratories, Inc., West Grove,
Pa.) to detect the anti-BCMA CARs. High levels of cell surface
expression of the anti-bcma1 CAR, the anti-bcma2 CAR, and the SP6
CAR on the transduced T-cells were observed, as shown in FIGS.
3B-3D.
For the G-anti-bcma2, 8ss-anti-bcma2, anti-bcma2-BB,
anti-bcma2-OX40, and anti-bcma2-BBOX40 CARs, peripheral blood
mononuclear cells were suspended at a concentration of
1.times.10.sup.6 cell per mL in T-cell medium containing 50 ng/mL
of the anti-CD3 monoclonal antibody OKT3 (Ortho, Bridgewater, N.J.)
and 300 IU/mL of IL-2. RETRONECTIN.TM. polypeptide (Takara Bio
Inc., Shiga, Japan), which is a recombinant polypeptide of human
fibronectin fragments that binds viruses and cell surface proteins,
was dissolved at a concentration of 11 .mu.g/mL in phosphate
buffered saline (PBS) solution, and two mL of the RETRONECTIN.TM.
polypeptide in PBS solution were added to each well of
nontissue-culture-coated 6 well plates (BD Biosciences, Franklin
Lakes, N.J.). The plates were incubated for two hours at room
temperature (RT). After the incubation, the RETRONECTIN.TM.
solution was aspirated, and 2 mL of a blocking solution consisting
of Hanks' balanced salt solution (HBSS) plus 2% bovine serum
albumin (BSA) were added to each RETRONECTIN.TM.-coated well. The
plates were incubated for 30 minutes at room temperature (RT). The
blocking solution was aspirated, and the wells were rinsed with a
solution of HBSS+2.5%
(4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid) (HEPES).
Retroviral supernatant was rapidly thawed and diluted 1:1 in T-cell
media, and two mL of the diluted supernatant were then added to
each RETRONECTIN.TM.-coated well. After addition of the
supernatants, the plates were centrifuged at 2000.times.g for 2
hours at 32.degree. C. The supernatant was then aspirated from the
wells, and 2.times.10.sup.6 T-cells that had been cultured with
OKT3 antibody and IL-2 for 2 days were added to each well. When the
T-cells were added to the retrovirus-coated plates, the T-cells
were suspended at a concentration of 0.5.times.10.sup.6 cells per
mL in T-cell medium plus 300 IU/mL of IL-2. After the T-cells were
added to each well, the plates were centrifuged for 10 minutes at
1000.times.g. The plates were incubated at 37.degree. C. overnight.
The transduction was repeated the next day. After an 18-24 hour
incubation, the T-cells were removed from the plates and suspended
in fresh T-cell medium with 300 IU/mL of IL-2 at a concentration of
0.5.times.10.sup.6 cells per mL and cultured at 37.degree. C. and
5% CO.sub.2. High levels of cell surface expression of
anti-bcma2-BBOX40, anti-bcma2-BB, and 8ss-anti-bcma2 on the
transduced T-cells were observed.
The results of this example demonstrate a method of producing the
inventive CAR-encoding nucleic acid sequence, and methods of
expressing the CAR on the surface of T-cells.
Example 3
This example describes a series of experiments used to determine
the specificity of the inventive CAR for BCMA.
Cells
NCI-H929, U266, and RPMI8226 are all BCMA+ multiple myeloma cell
lines that were obtained from ATCC (ATCC Nos. CRL-9068, TIB-196,
and CCL-155, respectively). A549 (ATCC No. CCL-185) is a
BCMA-negative lung cancer cell line. TC71 is a BCMA-negative
sarcoma cell line. CCRF-CEM is a BCMA-negative T-cell line (ATCC
No. CCL-119). BCMA-K562 are K562 cells (ATCC No. CCL-243) that have
been transduced with a nucleic acid sequence encoding full-length
BCMA. NGFR-K562 are K562 cells that have been transduced with the
gene encoding low-affinity nerve growth factor (see, e.g.,
Kochenderfer et al., J. Immunotherapy., 32(7):689-702 (2009)).
Peripheral blood lymphocytes (PBL) from three patients with
multiple myeloma (i.e., Myeloma Patient 1 through 3) were used, as
were PBL from three other subjects: Donor A, Donor B, and Donor C.
Donors A through C all had melanoma. CD34+ primary cells were
obtained from three normal healthy donors. A sample of plasmacytoma
cells was obtained from Myeloma patient 1, and a sample of bone
marrow was obtained from Myeloma Patient 3. All of the human
samples mentioned above were obtained from patients enrolled in
IRB-approved clinical trials at the National Cancer Institute. The
following primary human epithelial cells were obtained from Lonza,
Inc. (Basel, Switzerland): small airway epithelial cells, bronchial
epithelial cells, and intestinal epithelial cells.
Interferon-.gamma. and TNF ELISA
BCMA-positive or BCMA-negative cells were combined with
CAR-transduced T-cells in duplicate wells of a 96 well round bottom
plate (Corning Life Sciences, Lowell, Mass.) in AIM V.TM. medium
(Life Technologies, Carlsbad, Calif.)+5% human serum. The plates
were incubated at 37.degree. C. for 18-20 hours. Following the
incubation, ELISAs for IFN.gamma. and TNF were performed using
standard methods (Pierce, Rockford, Ill.).
T-cells transduced with the anti-bcma1 or anti-bcma2 CARs produced
large amounts of IFN.gamma. when they were cultured overnight with
the BCMA-expressing cell line BCMA-K562, but the CAR-transduced
T-cells only produced background levels of IFN.gamma. when they
were cultured with the negative control cell line NGFR-K562, as
indicated in Table 2 (all units are pg/mL IFN.gamma.).
TABLE-US-00002 TABLE 2 BCMA-Expressing Targets** BCMA-Negative
Targets Effector BCMA- RPMI- NGFR- CCRF- T-cells Cells* K562 H929
8226 K562 CEM A549 TC71 293T Alone anti-bcma1 15392 11306 5335 76
76 52 65 54 112 anti-bcma2 25474 23120 10587 62 67 32 31 28 41 SP6
32 60 149 27 28 21 361 73 27 Untransduced <12 <12 <12
<12 <12 <12 <12 12 <12 Targets Alone <12 <12
<12 <12 <12 <12 <12 13 *Effector cells were T-cells
from a patient with multiple myeloma (Myeloma Patient 2). The
T-cells were transduced with the indicated CAR or left
untransduced. **The indicated target cells were combined with the
effector cells for an overnight incubation and an IFN.gamma. ELISA
was performed.
T-cells expressing the 8ss-anti-bcma2, anti-bcma2-BB, and
anti-bcma2-OX40 CARs produced IFN.gamma. specifically in response
to BCMA+ target cells when T-cells and target cells were cocultured
overnight, as indicated in Table 3 (all units are pg/mL of
IFN.gamma.).
TABLE-US-00003 TABLE 3 BCMA-Positive Targets BCMA-Negative Targets
Effector BCMA- RPMI- NGFR- CCRF- T-cells Cells K562 8226 K562 CEM
A549 Alone anti-bcma2-OX40 17704 4875 42 44 24 40 anti-bcma2-BB
25304 8838 404 602 350 706 8ss-anti-bcma2 9671 2168 100 120 49 171
Untransduced <12 57 15 17 <12 20
T-cells transduced with anti-BCMA CARs produced large amounts of
IFN.gamma. when they were cultured overnight with BCMA-expressing
multiple myeloma cell lines. In contrast, the anti-BCMA CARs
produced much lower amounts of IFN.gamma. when they were cultured
with a variety of BCMA-negative cell lines. Compared with T-cells
transduced with the anti-bcma1 CAR, T-cells transduced with the
anti-bcma2 CAR and variants thereof (i.e., 8ss-anti-bcma2,
anti-bcma2-BB, and anti-bcma2-OX40) produced more IFN.gamma. when
cultured with BCMA-positive cells and less IFN.gamma. when cultured
with BCMA-negative cells.
T-cells transduced with the anti-bcma2 CAR variants produced TNF
specifically in response to BCMA+ target cells when T-cells and
target cells were cocultured overnight, as indicated in Table 4
(all units are pg/mL of tumor necrosis factor (TNF)).
TABLE-US-00004 TABLE 4 BCMA-Positive Targets BCMA-Negative Targets
Effector BCMA- RPMI- NGFR- CCRF- T-cells Cells K562 8226 K562 CEM
A549 Alone anti-bcma2-OX40 4913 3406 <40 47 <40 74
anti-bcma2-BB 6295 2723 56 164 89 252 8ss-anti-bcma2 5340 1354
<40 121 <40 191 Untransduced <40 <40 47 <40 <40
<40
Because the T-cells transduced with the anti-bcma2 CAR and variants
thereof exhibited slightly stronger and more specific recognition
of BCMA-expressing cells than T-cells transduced with the
anti-bcma1 CAR, only the anti-bcma2 CAR and anti-bcma2 CAR variants
were used in the following experiments.
CD107a Assay
Two populations of T-cells were prepared in two separate tubes. One
tube contained BCMA-K562 cells, and the other tube contained
NGFR-K562 cells. Both tubes also contained T-cells transduced with
the anti-bcma2 CAR and anti-bcma2 CAR variants, 1 mL of AIM V.TM.
medium (Life Technologies, Carlsbad, Calif.)+5% human serum, a
titrated concentration of an anti-CD107a antibody (eBioscience,
Inc., San Diego, Calif.; clone eBioH4A3), and 1 .mu.L of Golgi Stop
(BD Biosciences, Franklin Lakes, N.J.). All tubes were incubated at
37.degree. C. for four hours and then stained for expression of
CD3, CD4, and CD8.
CAR-transduced T-cells from three different subjects upregulated
CD107a specifically in response to stimulation with BCMA-expressing
target cells (see FIGS. 4A-4C). This indicates the occurrence of
BCMA-specific degranulation of the T-cells, which is a prerequisite
for perforin-mediated cytotoxicity (see, e.g., Rubio et al., Nature
Medicine, 9(11): 1377-1382 (2003)). In addition, T-cells expressing
the anti-bcma2 CAR variants 8ss-anti-bcma2, anti-bcma2-BB,
anti-bcma2-OX40 degranulated in a BCMA-specific manner when
stimulated with target cells in vitro as shown in FIGS. 5A-5D.
Intracellular Cytokine Staining Assay (ICCS)
A population of BCMA-K562 cells and a population of NGFR-K562 cells
were prepared in two separate tubes as described above. Both tubes
also contained T-cells transduced with the anti-bcma2 CAR from
Myeloma Patient 2, 1 mL of AIM V medium (Life Technologies,
Carlsbad, Calif.)+5% human serum, and 1 .mu.L of Golgi Stop (BD
Biosciences, Franklin Lakes, N.J.). All tubes were incubated at
37.degree. C. for six hours. The cells were surface-stained with
anti-CD3, anti-CD4, and anti-CD8 antibodies. The cells were
permeabilized, and intracellular staining was conducted for
IFN.gamma. (BD Biosciences, Franklin Lakes, N.J., clone B27), IL-2
(BD Biosciences, Franklin Lakes, N.J., clone MQ1-17H12), and TNF
(BD Biosciences, Franklin Lakes, N.J., clone MAb11) by following
the instructions of the Cytofix/Cytoperm kit (BD Biosciences,
Franklin Lakes, N.J.).
Large populations of T-cells transduced with the anti-bcma2 CAR
from Myeloma Patient 2 specifically produced the cytokines
IFN.gamma., IL-2, and TNF in a BCMA-specific manner after the
six-hour stimulation with BCMA-expressing target cells, as shown in
FIGS. 6A-6C.
Proliferation Assays
The ability of T-cells transduced with the anti-bcma2 CAR to
proliferate when stimulated with BCMA-expressing target cells was
assessed. Specifically, 0.5.times.10.sup.6 irradiated BCMA-K562
cells or 0.5.times.10.sup.6 irradiated NGFR-K562 cells were
co-cultured with 1.times.10.sup.6 total T-cells that had been
transduced with either the anti-bcma2 CAR or the SP6 CAR. The
T-cells were labeled with carboxyfluorescein diacetate succinimidyl
ester (CFSE) (Life Technologies, Carlsbad, Calif.) as described in
Mannering et al., J. Immunological Methods, 283(1-2): 173-183
(2003). The medium used in the co-cultures was AIM V.TM. medium
(Life Technologies, Carlsbad, Calif.)+5% human AB serum. IL-2 was
not added to the medium. Four days after initiation, the live cells
in each co-culture were counted with trypan blue for dead cell
exclusion. Flow cytometry was then performed by staining T-cells
with polyclonal biotin-labeled goat-anti-human BCMA antibodies
(R&D Systems, Minneapolis, Minn.) followed by streptavidin (BD
Biosciences, Franklin Lakes, N.J.), anti-CD38 antibody
(eBioscience, Inc., San Diego, Calif.), and anti-CD56 antibody (BD
Biosciences, Franklin Lakes, N.J.). Flow cytometry data analysis
was performed by using FlowJo software (Tree Star, Inc., Ashland,
Oreg.).
T-cells that expressed the anti-bcma2 CAR exhibited a greater
dilution of CFSE when cultured with the BCMA-K562 cells than when
cultured with negative control NGFR-K562 cells, as shown in FIG.
7A. These results indicate that T-cells transduced with the
anti-bcma2 CAR specifically proliferated when stimulated with
BCMA-expressing target cells. In contrast, there was no significant
difference in CFSE dilution when T-cells expressing the SP6 CAR
were cultured with either BCMA-K562 target cells or NGFR-K562
target cells (see FIG. 7B), which demonstrates a lack of
BCMA-specific proliferation by T-cells expressing the SP6 CAR.
At the beginning of the proliferation assays, 0.8.times.10.sup.6
T-cells expressing the anti-bcma2 CAR were cultured with either
BCMA-K562 cells or NGFR-K562 cells. After 4 days of culture,
2.7.times.10.sup.6 T-cells expressing the anti-bcma2 CAR were
present in the cultures containing BCMA-K562 cells while only
0.6.times.10.sup.6 T-cells expressing the anti-bcma2 CAR were
present in the cultures containing NGFR-K562 cells. This
BCMA-specific increase in the absolute number of T-cells expressing
the anti-bcma2 CAR indicates that these T-cells proliferated in
response to BCMA.
The results of this example demonstrate that T-cells expressing the
inventive CAR exhibit BCMA-specific cytokine production,
degranulation, and proliferation.
Example 4
This example demonstrates that T-cells expressing the inventive
anti-BCMA CAR can destroy multiple myeloma cell lines.
Cytotoxicity assays were performed to determine whether T-cells
transduced with the anti-bcma2 CAR described in Examples 2 and 3
could destroy BCMA-expressing multiple myeloma (MM) cell lines.
Specifically, the cytotoxicity of target cells was measured by
comparing the survival of BCMA-expressing target cells (i.e.,
multiple myeloma cell lines H929 and RPMI8226) relative to the
survival of negative control CCRF-CEM cells using an assay
described in, e.g., Kochenderfer et al., J. Immunotherapy, 32(7):
689-702 (2009), and Hermans et al., J. Immunological Methods,
285(1): 25-40 (2004).
Approximately 50,000 BCMA-expressing target cells and 50,000
CCRF-CEM cells were combined in the same tubes with different
numbers of CAR-transduced T-cells. CCRF-CEM negative control cells
were labeled with the fluorescent dye
5-(and-6)-(((4-chloromethyl)benzoyl)amino)tetramethylrhodamine
(CMTMR) (Life Technologies, Carlsbad, Calif.), and BCMA-expressing
target cells were labeled with CFSE. In all experiments, the
cytotoxicity of effector T-cells that were transduced with the
anti-bcma2 CAR was compared to the cytotoxicity of negative control
effector T-cells from the same subject that were transduced with
the SP6 CAR. Co-cultures were established in sterile 5 mL test
tubes (BD Biosciences, Franklin Lakes, N.J.) in duplicate at the
following T-cell:target cell ratios: 20.0:1, 7:1, 2:1, and 0.7:1.
The cultures were incubated for four hours at 37.degree. C.
Immediately after the incubation, 7-amino-actinomycin D (7AAD; BD
Biosciences, Franklin Lakes, N.J.) was added. The percentages of
live BCMA-expressing target cells and live CCRF-CEM negative
control cells were determined for each T-cell/target cell
co-culture.
For each T-cell/target cell co-culture, the percent survival of
BCMA-expressing target cells relative to the CCRF-CEM negative
control cells was determined by dividing the percent
BCMA-expressing cells by the percent CCRF-CEM negative control
cells. The corrected percent survival of BCMA-expressing target
cells was calculated by dividing the percent survival of
BCMA-expressing target cells in each T-cell/target cell co-culture
by the ratio of the percent BCMA-expressing target cells:percent
CCRF-CEM negative control cells in tubes containing only
BCMA-expressing target cells and CCRF-CEM negative control cells
without effector T-cells. This correction was necessary to account
for variation in the starting cell numbers and for spontaneous
target cell death. Cytotoxicity was calculated as follows: %
cytotoxicity of BCMA-expressing target cells=100-corrected %
survival of BCMA-expressing target cells
The results of the cytotoxicity assay are shown in FIGS. 7C and 7D.
T-cells transduced with the anti-bcma2 CAR specifically killed the
BCMA-expressing multiple myeloma cell lines H929 and RPMI8226. In
contrast, T-cells transduced with the SP6 CAR exhibited much lower
levels of cytotoxicity against these cell lines.
The results of this example demonstrate that the inventive nucleic
acid sequence encoding an anti-BCMA CAR can be used in a method of
destroying multiple myeloma cell lines.
Example 5
This example demonstrates that T-cells expressing the inventive
anti-BCMA CAR can destroy primary multiple myeloma cells.
The primary multiple myeloma cells described in Example 2 were
evaluated for BCMA expression, as well as BCMA-specific cytokine
production, degranulation, and proliferation using the methods
described above.
Cell surface BCMA expression was detected on four primary multiple
myeloma samples, as well as on primary bone marrow multiple myeloma
cells from Myeloma Patient 3 (see FIG. 8A). BCMA-expressing plasma
cells made up 40% of the cells in the bone marrow sample from
Myeloma Patient 3. Allogeneic T-cells transduced with the
anti-bcma2 CAR from Donor C produced IFN.gamma. after co-culture
with the unmanipulated bone marrow cells of Myeloma Patient 3, as
shown in FIG. 8B. Anti-bcma2 CAR-transduced T-cells from the same
allogeneic donor produced much less IFN.gamma. when they were
cultured with peripheral blood mononuclear cell (PBMC) from Myeloma
Patient 3. In addition, SP6-CAR-transduced T-cells from Donor C did
not specifically recognize the bone marrow of Myeloma Patient 3. It
has been previously reported that normal PBMC does not contain
cells that express BCMA (see, e.g., Ng et al., J. Immunology,
173(2): 807-817 (2004)). To confirm this observation, PBMC of
Patient 3 was assessed for BCMA expression by flow cytometry. PBMC
of Patient 3 did not contain BCMA-expressing cells, aside from a
small population of CD56+ CD38.sup.high cells that made up
approximately 0.75% of the PBMC. This population possibly consisted
of circulating multiple myeloma cells.
A plasmacytoma resected from Myeloma Patient 1 consisted of 93%
plasma cells, and these primary plasma cells expressed BCMA, as
shown in FIG. 8C. T-cells from Myeloma Patient 2 produced
IFN.gamma. when cultured with the allogeneic, unmanipulated
plasmacytoma cells of Myeloma Patient 1. T-cells from Myeloma
Patient 2 did not produce significant amounts of IFN.gamma. when
cultured with PBMC from Myeloma patient 1. T-cells from Myeloma
Patient 2 that were transduced with the SP6 CAR did not produce
significant amounts of IFN.gamma. when they were cultured with
either plasmacytoma cells or PBMC from Myeloma Patient 1. The PBMC
of Myeloma Patient 1 did not express BCMA as measured by flow
cytometry.
T-cells of Myeloma Patient 1, who had received eight prior cycles
of myeloma therapy, were successfully cultured and transduced with
a lentivirus vector encoding the anti-bcma2 CAR. Eight days after
the cultures were initiated, expression of the anti-bcma2 CAR was
detected on 65% of the T-cells. The T-cells from Myeloma Patient 1
expressing the anti-bcma2 CAR produced IFN.gamma. specifically in
response to autologous plasmacytoma cells (FIG. 8D). T-cells from
Myeloma Patient 1 expressing the SP6 CAR did not recognize
autologous plasmacytoma cells. T-cells expressing the anti-bcma2
CAR and T-cells expressing the SP6 CAR did not recognize autologous
PBMC. T-cells from Myeloma Patient 1 expressing the anti-bcma2 CAR
also specifically killed autologous plasmacytoma cells at low
effector to target ratios. In contrast, T-cells from Myeloma
Patient 1 expressing the SP6 CAR exhibited low levels of
cytotoxicity against autologous plasmacytoma cells (FIG. 8E).
The results of this example demonstrate that the inventive
anti-BCMA CAR can be used in a method of destroying primary
multiple myeloma cells.
Example 6
This example demonstrates that T-cells expressing the inventive
anti-BCMA CARs can destroy established tumors in mice.
Immunodeficient NSG mice (NOD.Cg-Prkdcscid Il2rgtm1Wj1/SzJ, Jackson
Laboratory) were injected intradermally with 8.times.10.sup.6
RPMI8226 cells. Tumors were allowed to grow for 17 to 19 days, and
then the mice received intravenous infusions of 8.times.10.sup.6
human T-cells that were transduced with either the anti-bcma2 CAR
or the SP6 CAR. Tumors were measured with calipers every 3 days.
The longest length and the length perpendicular to the longest
length were multiplied to obtain the tumor size (area) in mm.sup.2.
When the longest length reached 15 mm, mice were sacrificed. Animal
studies were approved by the National Cancer Institute Animal Care
and Use Committee.
The results of this example are shown in FIGS. 9A and 9B. At around
day 6, mice treated with anti-bcma2-transduced T-cells showed a
reduction in tumor size, and tumors were eradicated at day 15. In
addition, all mice treated with anti-bcma2-transduced T-cells
survived out to 30 days post T-cell infusion.
The results of this example demonstrate that the inventive
anti-BMCA CAR can destroy multiple myeloma cells in vivo.
All references, including publications, patent applications, and
patents, cited herein are hereby incorporated by reference to the
same extent as if each reference were individually and specifically
indicated to be incorporated by reference and were set forth in its
entirety herein.
The use of the twins "a" and "an" and "the" and similar referents
in the context of describing the invention (especially in the
context of the following claims) are to be construed to cover both
the singular and the plural, unless otherwise indicated herein or
clearly contradicted by context. The terms "comprising," "having,"
"including," and "containing" are to be construed as open-ended
terms (i.e., meaning "including, but not limited to,") unless
otherwise noted. Recitation of ranges of values herein are merely
intended to serve as a shorthand method of referring individually
to each separate value falling within the range, unless otherwise
indicated herein, and each separate value is incorporated into the
specification as if it were individually recited herein. All
methods described herein can be performed in any suitable order
unless otherwise indicated herein or otherwise clearly contradicted
by context. The use of any and all examples, or exemplary language
(e.g., "such as") provided herein, is intended merely to better
illuminate the invention and does not pose a limitation on the
scope of the invention unless otherwise claimed. No language in the
specification should be construed as indicating any non-claimed
element as essential to the practice of the invention.
Preferred embodiments of this invention are described herein,
including the best mode known to the inventors for carrying out the
invention. Variations of those preferred embodiments may become
apparent to those of ordinary skill in the art upon reading the
foregoing description. The inventors expect skilled artisans to
employ such variations as appropriate, and the inventors intend for
the invention to be practiced otherwise than as specifically
described herein. Accordingly, this invention includes all
modifications and equivalents of the subject matter recited in the
claims appended hereto as permitted by applicable law. Moreover,
any combination of the above-described elements in all possible
variations thereof is encompassed by the invention unless otherwise
indicated herein or otherwise clearly contradicted by context.
SEQUENCE LISTINGS
1
1211512DNAArtificial SequenceSynthetic 1atggccctgc ctgtgacagc
tctgctgctg cccctggccc tgctgctcca tgccgccaga 60cccgacatcg tgctgaccca
gagccccccc agcctggcca tgtctctggg caagagagcc 120accatcagct
gccgggccag cgagagcgtg accatcctgg gcagccacct gatctactgg
180tatcagcaga agcctggcca gccccccacc ctgctgatcc agctggctag
caatgtgcag 240accggcgtgc ccgccagatt cagcggcagc ggcagcagaa
ccgacttcac cctgaccatc 300gaccccgtgg aagaggacga cgtggccgtg
tactactgcc tgcagagccg gaccatcccc 360cggacctttg gcggaggaac
aaagctggaa atcaagggca gcaccagcgg ctccggcaag 420cctggctctg
gcgagggcag cacaaaggga cagattcagc tggtgcagag cggccctgag
480ctgaagaaac ccggcgagac agtgaagatc agctgcaagg cctccggcta
caccttccgg 540cactacagca tgaactgggt gaaacaggcc cctggcaagg
gcctgaagtg gatgggccgg 600atcaacaccg agagcggcgt gcccatctac
gccgacgact tcaagggcag attcgccttc 660agcgtggaaa ccagcgccag
caccgcctac ctggtgatca acaacctgaa ggacgaggat 720accgccagct
acttctgcag caacgactac ctgtacagcc tggacttctg gggccagggc
780accgccctga ccgtgtccag cttcgtgcct gtgttcctgc ccgccaagcc
caccaccacc 840cctgccccta gacctcccac cccagcccca acaatcgcca
gccagcctct gtccctgcgg 900cccgaagcct gtagacctgc tgccggcgga
gccgtgcaca ccagaggcct ggatttcgcc 960tgcgacatct acatctgggc
ccctctggcc ggcacctgtg gcgtgctgct gctgagcctg 1020gtgatcaccc
tgtactgcaa ccaccggaac agaagcaagc ggagccggct gctgcacagc
1080gactacatga acatgacccc aagacggcct ggccccaccc ggaagcacta
ccagccttac 1140gcccctccca gagacttcgc cgcctaccgg tccagagtga
agttcagcag atccgccgac 1200gcccctgcct accagcaggg acagaaccag
ctgtacaacg agctgaacct gggcagacgg 1260gaagagtacg acgtgctgga
caagcggaga ggccgggacc ccgagatggg cggaaagccc 1320agacggaaga
acccccagga aggcctgtat aacgaactgc agaaagacaa gatggccgag
1380gcctacagcg agatcggcat gaagggcgag cggaggcgcg gcaagggcca
cgatggcctg 1440taccagggcc tgagcaccgc caccaaggac acctacgacg
ccctgcacat gcaggccctg 1500ccccccagat ga 151221512DNAArtificial
SequenceSynthetic 2atggccctgc ctgtgacagc tctgctcctc cctctggccc
tgctgctcca tgccgccaga 60cccgacatcg tgctgaccca gagccccccc agcctggcca
tgtctctggg caagagagcc 120accatcagct gccgggccag cgagagcgtg
accatcctgg gcagccacct gatccactgg 180tatcagcaga agcccggcca
gccccccacc ctgctgatcc agctcgccag caatgtgcag 240accggcgtgc
ccgccagatt cagcggcagc ggcagcagaa ccgacttcac cctgaccatc
300gaccccgtgg aagaggacga cgtggccgtg tactactgcc tgcagagccg
gaccatcccc 360cggacctttg gcggaggcac caaactggaa atcaagggca
gcaccagcgg ctccggcaag 420cctggctctg gcgagggcag cacaaaggga
cagattcagc tggtgcagag cggccctgag 480ctgaagaaac ccggcgagac
agtgaagatc agctgcaagg cctccggcta caccttcacc 540gactacagca
tcaactgggt gaaaagagcc cctggcaagg gcctgaagtg gatgggctgg
600atcaacaccg agacaagaga gcccgcctac gcctacgact tccggggcag
attcgccttc 660agcctggaaa ccagcgccag caccgcctac ctgcagatca
acaacctgaa gtacgaggac 720accgccacct acttttgcgc cctggactac
agctacgcca tggactactg gggccagggc 780accagcgtga ccgtgtccag
cttcgtgccc gtgttcctgc ccgccaaacc taccaccacc 840cctgccccta
gacctcccac cccagcccca acaatcgcca gccagcctct gtctctgcgg
900cccgaagcct gtagacctgc tgccggcgga gccgtgcaca ccagaggcct
ggacttcgcc 960tgcgacatct acatctgggc ccctctggcc ggcacctgtg
gcgtgctgct gctgagcctg 1020gtgatcaccc tgtactgcaa ccaccggaac
agaagcaagc ggagccggct gctgcacagc 1080gactacatga acatgacccc
aagacggcct ggccccaccc ggaagcacta ccagccttac 1140gcccctccca
gagacttcgc cgcctaccgg tccagagtga agttcagcag atccgccgac
1200gcccctgcct accagcaggg acagaaccag ctgtacaacg agctgaacct
gggcagacgg 1260gaagagtacg acgtgctgga caagcggaga ggccgggacc
ccgagatggg cggaaagccc 1320agacggaaga acccccagga aggcctgtat
aacgaactgc agaaagacaa gatggccgag 1380gcctacagcg agatcggcat
gaagggcgag cggaggcgcg gcaagggcca cgatggcctg 1440taccagggcc
tgagcaccgc caccaaggac acctacgacg ccctgcacat gcaggccctg
1500ccccccagat ga 151231512DNAArtificial SequenceSynthetic
3atggctctgc ctgtgacagc tctgctgctg cctctggccc tgctgctgca tgccgccaga
60cctgatatcg tgctgaccca gagccctccc agcctggcca tgtctctggg caagagagcc
120accatcagct gcagagccag cgagagcgtg accatcctgg gcagccacct
gatctactgg 180tatcagcaga agcccggcca gccccccaca ctgctgattc
agctggcctc caatgtgcag 240accggcgtgc cagccagatt ttccggcagc
ggcagcagaa ccgacttcac cctgaccatc 300gaccccgtgg aagaggacga
cgtggccgtg tactactgcc tgcagagcag aaccatcccc 360cggacctttg
gcggaggcac caagctggaa atcaagggca gcaccagcgg ctccggcaag
420cctggatctg gcgagggatc taccaaggga cagatccagc tggtgcagag
cggccctgag 480ctgaagaaac ccggcgagac agtgaagatc tcctgcaagg
ccagcggcta caccttcacc 540cactacagca tgaactgggt caagcaggcc
cctggcaagg gcctgaagtg gatgggccgg 600atcaacaccg agacaggcga
gcccctgtac gccgacgact ttaagggcag attcgccttc 660agcctggaaa
ccagcgccag caccgcctac ctcgtgatca acaacctgaa gaacgaggac
720accgccacct ttttctgctc caacgactac ctgtacagct gcgactactg
gggccagggc 780accaccctga cagtgtctag cttcgtgccc gtgttcctgc
ccgccaagcc tacaacaacc 840cctgccccta gacctcccac cccagcccct
acaattgcct ctcagcctct gagcctgagg 900cccgaggctt gtagaccagc
tgctggcgga gccgtgcaca ccagaggact ggatttcgcc 960tgcgacatct
acatctgggc ccctctggcc ggcacctgtg gcgtgctgct gctgagcctg
1020gtgatcaccc tgtactgcaa ccaccggaac agaagcaagc ggagccggct
gctgcacagc 1080gactacatga acatgacccc aagacggcct ggccccaccc
ggaagcacta ccagccttac 1140gcccctccca gagacttcgc cgcctaccgg
tccagagtga agttcagcag atccgccgac 1200gcccctgcct accagcaggg
acagaaccag ctgtacaacg agctgaacct gggcagacgg 1260gaagagtacg
acgtgctgga caagcggaga ggccgggacc ccgagatggg cggaaagccc
1320agacggaaga acccccagga aggcctgtat aacgaactgc agaaagacaa
gatggccgag 1380gcctacagcg agatcggcat gaagggcgag cggaggcgcg
gcaagggcca cgatggcctg 1440taccagggcc tgagcaccgc caccaaggac
acctacgacg ccctgcacat gcaggccctg 1500ccccccagat ga
15124503PRTArtificial SequenceSynthetic 4Met Ala Leu Pro Val Thr
Ala Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg
Pro Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met
Ser Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45
Ser Val Thr Ile Leu Gly Ser His Leu Ile Tyr Trp Tyr Gln Gln Lys 50
55 60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val
Gln 65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg
Thr Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp
Val Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg
Thr Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr
Ser Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys
Gly Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys
Lys Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175
Tyr Thr Phe Arg His Tyr Ser Met Asn Trp Val Lys Gln Ala Pro Gly 180
185 190 Lys Gly Leu Lys Trp Met Gly Arg Ile Asn Thr Glu Ser Gly Val
Pro 195 200 205 Ile Tyr Ala Asp Asp Phe Lys Gly Arg Phe Ala Phe Ser
Val Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Val Ile Asn Asn
Leu Lys Asp Glu Asp 225 230 235 240 Thr Ala Ser Tyr Phe Cys Ser Asn
Asp Tyr Leu Tyr Ser Leu Asp Phe 245 250 255 Trp Gly Gln Gly Thr Ala
Leu Thr Val Ser Ser Phe Val Pro Val Phe 260 265 270 Leu Pro Ala Lys
Pro Thr Thr Thr Pro Ala Pro Arg Pro Pro Thr Pro 275 280 285 Ala Pro
Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro Glu Ala Cys 290 295 300
Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg Gly Leu Asp Phe Ala 305
310 315 320 Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr Cys Gly
Val Leu 325 330 335 Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys Asn His
Arg Asn Arg Ser 340 345 350 Lys Arg Ser Arg Leu Leu His Ser Asp Tyr
Met Asn Met Thr Pro Arg 355 360 365 Arg Pro Gly Pro Thr Arg Lys His
Tyr Gln Pro Tyr Ala Pro Pro Arg 370 375 380 Asp Phe Ala Ala Tyr Arg
Ser Arg Val Lys Phe Ser Arg Ser Ala Asp 385 390 395 400 Ala Pro Ala
Tyr Gln Gln Gly Gln Asn Gln Leu Tyr Asn Glu Leu Asn 405 410 415 Leu
Gly Arg Arg Glu Glu Tyr Asp Val Leu Asp Lys Arg Arg Gly Arg 420 425
430 Asp Pro Glu Met Gly Gly Lys Pro Arg Arg Lys Asn Pro Gln Glu Gly
435 440 445 Leu Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu Ala Tyr
Ser Glu 450 455 460 Ile Gly Met Lys Gly Glu Arg Arg Arg Gly Lys Gly
His Asp Gly Leu 465 470 475 480 Tyr Gln Gly Leu Ser Thr Ala Thr Lys
Asp Thr Tyr Asp Ala Leu His 485 490 495 Met Gln Ala Leu Pro Pro Arg
500 5503PRTArtificial SequenceSynthetic 5Met Ala Leu Pro Val Thr
Ala Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg
Pro Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met
Ser Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45
Ser Val Thr Ile Leu Gly Ser His Leu Ile His Trp Tyr Gln Gln Lys 50
55 60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val
Gln 65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg
Thr Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp
Val Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg
Thr Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr
Ser Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys
Gly Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys
Lys Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175
Tyr Thr Phe Thr Asp Tyr Ser Ile Asn Trp Val Lys Arg Ala Pro Gly 180
185 190 Lys Gly Leu Lys Trp Met Gly Trp Ile Asn Thr Glu Thr Arg Glu
Pro 195 200 205 Ala Tyr Ala Tyr Asp Phe Arg Gly Arg Phe Ala Phe Ser
Leu Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Gln Ile Asn Asn
Leu Lys Tyr Glu Asp 225 230 235 240 Thr Ala Thr Tyr Phe Cys Ala Leu
Asp Tyr Ser Tyr Ala Met Asp Tyr 245 250 255 Trp Gly Gln Gly Thr Ser
Val Thr Val Ser Ser Phe Val Pro Val Phe 260 265 270 Leu Pro Ala Lys
Pro Thr Thr Thr Pro Ala Pro Arg Pro Pro Thr Pro 275 280 285 Ala Pro
Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro Glu Ala Cys 290 295 300
Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg Gly Leu Asp Phe Ala 305
310 315 320 Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr Cys Gly
Val Leu 325 330 335 Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys Asn His
Arg Asn Arg Ser 340 345 350 Lys Arg Ser Arg Leu Leu His Ser Asp Tyr
Met Asn Met Thr Pro Arg 355 360 365 Arg Pro Gly Pro Thr Arg Lys His
Tyr Gln Pro Tyr Ala Pro Pro Arg 370 375 380 Asp Phe Ala Ala Tyr Arg
Ser Arg Val Lys Phe Ser Arg Ser Ala Asp 385 390 395 400 Ala Pro Ala
Tyr Gln Gln Gly Gln Asn Gln Leu Tyr Asn Glu Leu Asn 405 410 415 Leu
Gly Arg Arg Glu Glu Tyr Asp Val Leu Asp Lys Arg Arg Gly Arg 420 425
430 Asp Pro Glu Met Gly Gly Lys Pro Arg Arg Lys Asn Pro Gln Glu Gly
435 440 445 Leu Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu Ala Tyr
Ser Glu 450 455 460 Ile Gly Met Lys Gly Glu Arg Arg Arg Gly Lys Gly
His Asp Gly Leu 465 470 475 480 Tyr Gln Gly Leu Ser Thr Ala Thr Lys
Asp Thr Tyr Asp Ala Leu His 485 490 495 Met Gln Ala Leu Pro Pro Arg
500 6503PRTArtificial SequenceSynthetic 6Met Ala Leu Pro Val Thr
Ala Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg
Pro Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met
Ser Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45
Ser Val Thr Ile Leu Gly Ser His Leu Ile Tyr Trp Tyr Gln Gln Lys 50
55 60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val
Gln 65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg
Thr Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp
Val Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg
Thr Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr
Ser Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys
Gly Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys
Lys Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175
Tyr Thr Phe Thr His Tyr Ser Met Asn Trp Val Lys Gln Ala Pro Gly 180
185 190 Lys Gly Leu Lys Trp Met Gly Arg Ile Asn Thr Glu Thr Gly Glu
Pro 195 200 205 Leu Tyr Ala Asp Asp Phe Lys Gly Arg Phe Ala Phe Ser
Leu Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Val Ile Asn Asn
Leu Lys Asn Glu Asp 225 230 235 240 Thr Ala Thr Phe Phe Cys Ser Asn
Asp Tyr Leu Tyr Ser Cys Asp Tyr 245 250 255 Trp Gly Gln Gly Thr Thr
Leu Thr Val Ser Ser Phe Val Pro Val Phe 260 265 270 Leu Pro Ala Lys
Pro Thr Thr Thr Pro Ala Pro Arg Pro Pro Thr Pro 275 280 285 Ala Pro
Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro Glu Ala Cys 290 295 300
Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg Gly Leu Asp Phe Ala 305
310 315 320 Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr Cys Gly
Val Leu 325 330 335 Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys Asn His
Arg Asn Arg Ser 340 345 350 Lys Arg Ser Arg Leu Leu His Ser Asp Tyr
Met Asn Met Thr Pro Arg 355 360 365 Arg Pro Gly Pro Thr Arg Lys His
Tyr Gln Pro Tyr Ala Pro Pro Arg 370 375 380 Asp Phe Ala Ala Tyr Arg
Ser Arg Val Lys Phe Ser Arg Ser Ala Asp 385 390 395 400 Ala Pro Ala
Tyr Gln Gln Gly Gln Asn Gln Leu Tyr Asn Glu Leu Asn 405 410 415 Leu
Gly Arg Arg Glu Glu Tyr Asp Val Leu Asp Lys Arg Arg Gly Arg 420 425
430 Asp Pro Glu Met Gly Gly Lys Pro Arg Arg Lys Asn Pro Gln Glu Gly
435 440 445 Leu Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu Ala Tyr
Ser Glu 450 455 460 Ile Gly Met Lys Gly Glu Arg Arg Arg Gly Lys Gly
His Asp Gly Leu 465 470 475 480 Tyr Gln Gly Leu Ser Thr Ala Thr Lys
Asp Thr Tyr Asp Ala Leu His 485 490 495 Met Gln Ala Leu Pro Pro Arg
500 718PRTArtificial SequenceSynthetic 7Gly Ser Thr Ser Gly Ser Gly
Lys Pro Gly Ser Gly Glu Gly Ser Thr 1 5 10 15 Lys Gly
8507PRTArtificial SequenceSynthetic 8Met Leu Leu Leu Val Thr Ser
Leu Leu Leu Cys Glu Leu Pro His Pro 1 5 10 15 Ala Phe Leu Leu Ile
Pro Asp Ile Val Leu Thr
Gln Ser Pro Pro Ser 20 25 30 Leu Ala Met Ser Leu Gly Lys Arg Ala
Thr Ile Ser Cys Arg Ala Ser 35 40 45 Glu Ser Val Thr Ile Leu Gly
Ser His Leu Ile His Trp Tyr Gln Gln 50 55 60 Lys Pro Gly Gln Pro
Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val 65 70 75 80 Gln Thr Gly
Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg Thr Asp 85 90 95 Phe
Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp Val Ala Val Tyr 100 105
110 Tyr Cys Leu Gln Ser Arg Thr Ile Pro Arg Thr Phe Gly Gly Gly Thr
115 120 125 Lys Leu Glu Ile Lys Gly Ser Thr Ser Gly Ser Gly Lys Pro
Gly Ser 130 135 140 Gly Glu Gly Ser Thr Lys Gly Gln Ile Gln Leu Val
Gln Ser Gly Pro 145 150 155 160 Glu Leu Lys Lys Pro Gly Glu Thr Val
Lys Ile Ser Cys Lys Ala Ser 165 170 175 Gly Tyr Thr Phe Thr Asp Tyr
Ser Ile Asn Trp Val Lys Arg Ala Pro 180 185 190 Gly Lys Gly Leu Lys
Trp Met Gly Trp Ile Asn Thr Glu Thr Arg Glu 195 200 205 Pro Ala Tyr
Ala Tyr Asp Phe Arg Gly Arg Phe Ala Phe Ser Leu Glu 210 215 220 Thr
Ser Ala Ser Thr Ala Tyr Leu Gln Ile Asn Asn Leu Lys Tyr Glu 225 230
235 240 Asp Thr Ala Thr Tyr Phe Cys Ala Leu Asp Tyr Ser Tyr Ala Met
Asp 245 250 255 Tyr Trp Gly Gln Gly Thr Ser Val Thr Val Ser Ser Ala
Ala Ala Phe 260 265 270 Val Pro Val Phe Leu Pro Ala Lys Pro Thr Thr
Thr Pro Ala Pro Arg 275 280 285 Pro Pro Thr Pro Ala Pro Thr Ile Ala
Ser Gln Pro Leu Ser Leu Arg 290 295 300 Pro Glu Ala Cys Arg Pro Ala
Ala Gly Gly Ala Val His Thr Arg Gly 305 310 315 320 Leu Asp Phe Ala
Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr 325 330 335 Cys Gly
Val Leu Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys Asn His 340 345 350
Arg Asn Arg Ser Lys Arg Ser Arg Leu Leu His Ser Asp Tyr Met Asn 355
360 365 Met Thr Pro Arg Arg Pro Gly Pro Thr Arg Lys His Tyr Gln Pro
Tyr 370 375 380 Ala Pro Pro Arg Asp Phe Ala Ala Tyr Arg Ser Arg Val
Lys Phe Ser 385 390 395 400 Arg Ser Ala Asp Ala Pro Ala Tyr Gln Gln
Gly Gln Asn Gln Leu Tyr 405 410 415 Asn Glu Leu Asn Leu Gly Arg Arg
Glu Glu Tyr Asp Val Leu Asp Lys 420 425 430 Arg Arg Gly Arg Asp Pro
Glu Met Gly Gly Lys Pro Arg Arg Lys Asn 435 440 445 Pro Gln Glu Gly
Leu Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu 450 455 460 Ala Tyr
Ser Glu Ile Gly Met Lys Gly Glu Arg Arg Arg Gly Lys Gly 465 470 475
480 His Asp Gly Leu Tyr Gln Gly Leu Ser Thr Ala Thr Lys Asp Thr Tyr
485 490 495 Asp Ala Leu His Met Gln Ala Leu Pro Pro Arg 500 505
9506PRTArtificial SequenceSynthetic 9Met Ala Leu Pro Val Thr Ala
Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg Pro
Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met Ser
Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45 Ser
Val Thr Ile Leu Gly Ser His Leu Ile His Trp Tyr Gln Gln Lys 50 55
60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val Gln
65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg Thr
Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp Val
Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg Thr
Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr Ser
Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys Gly
Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys Lys
Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175 Tyr
Thr Phe Thr Asp Tyr Ser Ile Asn Trp Val Lys Arg Ala Pro Gly 180 185
190 Lys Gly Leu Lys Trp Met Gly Trp Ile Asn Thr Glu Thr Arg Glu Pro
195 200 205 Ala Tyr Ala Tyr Asp Phe Arg Gly Arg Phe Ala Phe Ser Leu
Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Gln Ile Asn Asn Leu
Lys Tyr Glu Asp 225 230 235 240 Thr Ala Thr Tyr Phe Cys Ala Leu Asp
Tyr Ser Tyr Ala Met Asp Tyr 245 250 255 Trp Gly Gln Gly Thr Ser Val
Thr Val Ser Ser Ala Ala Ala Phe Val 260 265 270 Pro Val Phe Leu Pro
Ala Lys Pro Thr Thr Thr Pro Ala Pro Arg Pro 275 280 285 Pro Thr Pro
Ala Pro Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro 290 295 300 Glu
Ala Cys Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg Gly Leu 305 310
315 320 Asp Phe Ala Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr
Cys 325 330 335 Gly Val Leu Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys
Asn His Arg 340 345 350 Asn Arg Ser Lys Arg Ser Arg Leu Leu His Ser
Asp Tyr Met Asn Met 355 360 365 Thr Pro Arg Arg Pro Gly Pro Thr Arg
Lys His Tyr Gln Pro Tyr Ala 370 375 380 Pro Pro Arg Asp Phe Ala Ala
Tyr Arg Ser Arg Val Lys Phe Ser Arg 385 390 395 400 Ser Ala Asp Ala
Pro Ala Tyr Gln Gln Gly Gln Asn Gln Leu Tyr Asn 405 410 415 Glu Leu
Asn Leu Gly Arg Arg Glu Glu Tyr Asp Val Leu Asp Lys Arg 420 425 430
Arg Gly Arg Asp Pro Glu Met Gly Gly Lys Pro Arg Arg Lys Asn Pro 435
440 445 Gln Glu Gly Leu Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu
Ala 450 455 460 Tyr Ser Glu Ile Gly Met Lys Gly Glu Arg Arg Arg Gly
Lys Gly His 465 470 475 480 Asp Gly Leu Tyr Gln Gly Leu Ser Thr Ala
Thr Lys Asp Thr Tyr Asp 485 490 495 Ala Leu His Met Gln Ala Leu Pro
Pro Arg 500 505 10512PRTArtificial SequenceSynthetic 10Met Ala Leu
Pro Val Thr Ala Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His
Ala Ala Arg Pro Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25
30 Ala Met Ser Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu
35 40 45 Ser Val Thr Ile Leu Gly Ser His Leu Ile His Trp Tyr Gln
Gln Lys 50 55 60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala
Ser Asn Val Gln 65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser
Gly Ser Arg Thr Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu
Glu Asp Asp Val Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr
Ile Pro Arg Thr Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys
Gly Ser Thr Ser Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly
Ser Thr Lys Gly Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155
160 Leu Lys Lys Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly
165 170 175 Tyr Thr Phe Thr Asp Tyr Ser Ile Asn Trp Val Lys Arg Ala
Pro Gly 180 185 190 Lys Gly Leu Lys Trp Met Gly Trp Ile Asn Thr Glu
Thr Arg Glu Pro 195 200 205 Ala Tyr Ala Tyr Asp Phe Arg Gly Arg Phe
Ala Phe Ser Leu Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Gln
Ile Asn Asn Leu Lys Tyr Glu Asp 225 230 235 240 Thr Ala Thr Tyr Phe
Cys Ala Leu Asp Tyr Ser Tyr Ala Met Asp Tyr 245 250 255 Trp Gly Gln
Gly Thr Ser Val Thr Val Ser Ser Ala Ala Ala Phe Val 260 265 270 Pro
Val Phe Leu Pro Ala Lys Pro Thr Thr Thr Pro Ala Pro Arg Pro 275 280
285 Pro Thr Pro Ala Pro Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro
290 295 300 Glu Ala Cys Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg
Gly Leu 305 310 315 320 Asp Phe Ala Cys Asp Ile Tyr Ile Trp Ala Pro
Leu Ala Gly Thr Cys 325 330 335 Gly Val Leu Leu Leu Ser Leu Val Ile
Thr Leu Tyr Cys Asn His Arg 340 345 350 Asn Arg Phe Ser Val Val Lys
Arg Gly Arg Lys Lys Leu Leu Tyr Ile 355 360 365 Phe Lys Gln Pro Phe
Met Arg Pro Val Gln Thr Thr Gln Glu Glu Asp 370 375 380 Gly Cys Ser
Cys Arg Phe Pro Glu Glu Glu Glu Gly Gly Cys Glu Leu 385 390 395 400
Arg Val Lys Phe Ser Arg Ser Ala Asp Ala Pro Ala Tyr Gln Gln Gly 405
410 415 Gln Asn Gln Leu Tyr Asn Glu Leu Asn Leu Gly Arg Arg Glu Glu
Tyr 420 425 430 Asp Val Leu Asp Lys Arg Arg Gly Arg Asp Pro Glu Met
Gly Gly Lys 435 440 445 Pro Arg Arg Lys Asn Pro Gln Glu Gly Leu Tyr
Asn Glu Leu Gln Lys 450 455 460 Asp Lys Met Ala Glu Ala Tyr Ser Glu
Ile Gly Met Lys Gly Glu Arg 465 470 475 480 Arg Arg Gly Lys Gly His
Asp Gly Leu Tyr Gln Gly Leu Ser Thr Ala 485 490 495 Thr Lys Asp Thr
Tyr Asp Ala Leu His Met Gln Ala Leu Pro Pro Arg 500 505 510
11502PRTArtificial SequenceSynthetic 11Met Ala Leu Pro Val Thr Ala
Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg Pro
Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met Ser
Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45 Ser
Val Thr Ile Leu Gly Ser His Leu Ile His Trp Tyr Gln Gln Lys 50 55
60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val Gln
65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg Thr
Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp Val
Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg Thr
Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr Ser
Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys Gly
Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys Lys
Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175 Tyr
Thr Phe Thr Asp Tyr Ser Ile Asn Trp Val Lys Arg Ala Pro Gly 180 185
190 Lys Gly Leu Lys Trp Met Gly Trp Ile Asn Thr Glu Thr Arg Glu Pro
195 200 205 Ala Tyr Ala Tyr Asp Phe Arg Gly Arg Phe Ala Phe Ser Leu
Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Gln Ile Asn Asn Leu
Lys Tyr Glu Asp 225 230 235 240 Thr Ala Thr Tyr Phe Cys Ala Leu Asp
Tyr Ser Tyr Ala Met Asp Tyr 245 250 255 Trp Gly Gln Gly Thr Ser Val
Thr Val Ser Ser Ala Ala Ala Phe Val 260 265 270 Pro Val Phe Leu Pro
Ala Lys Pro Thr Thr Thr Pro Ala Pro Arg Pro 275 280 285 Pro Thr Pro
Ala Pro Thr Ile Ala Ser Gln Pro Leu Ser Leu Arg Pro 290 295 300 Glu
Ala Cys Arg Pro Ala Ala Gly Gly Ala Val His Thr Arg Gly Leu 305 310
315 320 Asp Phe Ala Cys Asp Ile Tyr Ile Trp Ala Pro Leu Ala Gly Thr
Cys 325 330 335 Gly Val Leu Leu Leu Ser Leu Val Ile Thr Leu Tyr Cys
Asn His Arg 340 345 350 Asn Arg Arg Asp Gln Arg Leu Pro Pro Asp Ala
His Lys Pro Pro Gly 355 360 365 Gly Gly Ser Phe Arg Thr Pro Ile Gln
Glu Glu Gln Ala Asp Ala His 370 375 380 Ser Thr Leu Ala Lys Ile Arg
Val Lys Phe Ser Arg Ser Ala Asp Ala 385 390 395 400 Pro Ala Tyr Gln
Gln Gly Gln Asn Gln Leu Tyr Asn Glu Leu Asn Leu 405 410 415 Gly Arg
Arg Glu Glu Tyr Asp Val Leu Asp Lys Arg Arg Gly Arg Asp 420 425 430
Pro Glu Met Gly Gly Lys Pro Arg Arg Lys Asn Pro Gln Glu Gly Leu 435
440 445 Tyr Asn Glu Leu Gln Lys Asp Lys Met Ala Glu Ala Tyr Ser Glu
Ile 450 455 460 Gly Met Lys Gly Glu Arg Arg Arg Gly Lys Gly His Asp
Gly Leu Tyr 465 470 475 480 Gln Gly Leu Ser Thr Ala Thr Lys Asp Thr
Tyr Asp Ala Leu His Met 485 490 495 Gln Ala Leu Pro Pro Arg 500
12549PRTArtificial SequenceSynthetic 12Met Ala Leu Pro Val Thr Ala
Leu Leu Leu Pro Leu Ala Leu Leu Leu 1 5 10 15 His Ala Ala Arg Pro
Asp Ile Val Leu Thr Gln Ser Pro Pro Ser Leu 20 25 30 Ala Met Ser
Leu Gly Lys Arg Ala Thr Ile Ser Cys Arg Ala Ser Glu 35 40 45 Ser
Val Thr Ile Leu Gly Ser His Leu Ile His Trp Tyr Gln Gln Lys 50 55
60 Pro Gly Gln Pro Pro Thr Leu Leu Ile Gln Leu Ala Ser Asn Val Gln
65 70 75 80 Thr Gly Val Pro Ala Arg Phe Ser Gly Ser Gly Ser Arg Thr
Asp Phe 85 90 95 Thr Leu Thr Ile Asp Pro Val Glu Glu Asp Asp Val
Ala Val Tyr Tyr 100 105 110 Cys Leu Gln Ser Arg Thr Ile Pro Arg Thr
Phe Gly Gly Gly Thr Lys 115 120 125 Leu Glu Ile Lys Gly Ser Thr Ser
Gly Ser Gly Lys Pro Gly Ser Gly 130 135 140 Glu Gly Ser Thr Lys Gly
Gln Ile Gln Leu Val Gln Ser Gly Pro Glu 145 150 155 160 Leu Lys Lys
Pro Gly Glu Thr Val Lys Ile Ser Cys Lys Ala Ser Gly 165 170 175 Tyr
Thr Phe Thr Asp Tyr Ser Ile Asn Trp Val Lys Arg Ala Pro Gly 180 185
190 Lys Gly Leu Lys Trp Met Gly Trp Ile Asn Thr Glu Thr Arg Glu Pro
195 200 205 Ala Tyr Ala Tyr Asp Phe Arg Gly Arg Phe Ala Phe Ser Leu
Glu Thr 210 215 220 Ser Ala Ser Thr Ala Tyr Leu Gln Ile Asn Asn Leu
Lys Tyr Glu Asp 225 230 235 240 Thr Ala Thr Tyr Phe Cys Ala Leu Asp
Tyr Ser Tyr Ala Met Asp Tyr 245 250 255 Trp Gly Gln Gly Thr Ser Val
Thr Val Ser Ser Ala Ala Ala Phe Val 260 265 270 Pro Val Phe Leu Pro
Ala Lys Pro Thr Thr Thr Pro Ala Pro Arg
Pro 275 280 285 Pro Thr Pro Ala Pro Thr Ile Ala Ser Gln Pro Leu Ser
Leu Arg Pro 290 295 300 Glu Ala Cys Arg Pro Ala Ala Gly Gly Ala Val
His Thr Arg Gly Leu 305 310 315 320 Asp Phe Ala Cys Asp Ile Tyr Ile
Trp Ala Pro Leu Ala Gly Thr Cys 325 330 335 Gly Val Leu Leu Leu Ser
Leu Val Ile Thr Leu Tyr Cys Asn His Arg 340 345 350 Asn Arg Phe Ser
Val Val Lys Arg Gly Arg Lys Lys Leu Leu Tyr Ile 355 360 365 Phe Lys
Gln Pro Phe Met Arg Pro Val Gln Thr Thr Gln Glu Glu Asp 370 375 380
Gly Cys Ser Cys Arg Phe Pro Glu Glu Glu Glu Gly Gly Cys Glu Leu 385
390 395 400 Arg Arg Asp Gln Arg Leu Pro Pro Asp Ala His Lys Pro Pro
Gly Gly 405 410 415 Gly Ser Phe Arg Thr Pro Ile Gln Glu Glu Gln Ala
Asp Ala His Ser 420 425 430 Thr Leu Ala Lys Ile Arg Val Lys Phe Ser
Arg Ser Ala Asp Ala Pro 435 440 445 Ala Tyr Gln Gln Gly Gln Asn Gln
Leu Tyr Asn Glu Leu Asn Leu Gly 450 455 460 Arg Arg Glu Glu Tyr Asp
Val Leu Asp Lys Arg Arg Gly Arg Asp Pro 465 470 475 480 Glu Met Gly
Gly Lys Pro Arg Arg Lys Asn Pro Gln Glu Gly Leu Tyr 485 490 495 Asn
Glu Leu Gln Lys Asp Lys Met Ala Glu Ala Tyr Ser Glu Ile Gly 500 505
510 Met Lys Gly Glu Arg Arg Arg Gly Lys Gly His Asp Gly Leu Tyr Gln
515 520 525 Gly Leu Ser Thr Ala Thr Lys Asp Thr Tyr Asp Ala Leu His
Met Gln 530 535 540 Ala Leu Pro Pro Arg 545
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